Citrus Sinensis ID: 017977

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360---
Protein Sequence
MDVLLCRASTLTWSQSISPCLHSSAKPFSRCEAKKFRVFCTSDHTQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIMS
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccHHHHHHHHHcccccccccccccEEEEEccccHHHHHHHHHHHHcccEEEEEEcccccccccccccccccccccccccccccccccccccEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEcccEEEEccccccccccccccccccccccccccHHHHHHHHHHHHHcccccccEEEEEEcEEEccccccHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHccccccccEEcccccccHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHcccccccHHHHHcccccccccHHHHHHHHHc
Secondary Structure Prediction (SSPRO)
ccEEEEcccEEcccccccccccccccccccccccEEEEEEEEccccccccEEEEEEccccHHHHHHHHHHHHcccEEEEEEccHHHHHHHccccccEEEEEEEccccccHHHHcccccEEEEcccccHHccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEccccEEEEEccEEEEEcccccEEEccccccccHHHHHHHHHHHHHHHHHccccEEEEEEEEEEEcccccHHHHcccccEEccccccccccccccHEEHHHHHHHHHHHHHcccccccEEccccccccHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHccccccHHHHHHcccEEEcccHHHHHHHHHc
Coil and Loop (DISEMBL)
MDVLLCrastltwsqsispclhssakpfsrceakkfrvfctsdhtqkasqmtvsvtgatgfIGRRLVQRLQADNHQVrvltrsrskaelifpgkktrffpgvmiaeepqwrdciqgsTAVVNlagtpigtrwSSEIKKEIKESRIRVTSKVVDLinespegvrpsvlelvkpkYLMRAAHQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFmmfaggplgsgqqwfswIHLDDIVNLIYEAlsnpsyrgvingtapnpvRLAEMCDHLgnvlgrpswlpvpEFALKAVLGEGAFVVLEGQRVVPArakelgfpfkYRYVKDALKAIMS
Flexible Loop (DISEMBL)
MDVLLCRAStltwsqsispclhssakPFSRCEAKKFRVFCTSdhtqkasqmtvsvTGATGFIGRRLVQrlqadnhqvrvltrsrskaelifpgkktrffpGVMIAEEPQWRDCIQGSTAVVNLagtpigtrwsseikkeikesrirvtskvvdlinespegvrpsvleLVKPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTalkvnkdvRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVparakelgfpfkyryVKDALKAIMS
Low Complexity Region (SEG)
MDVLLCRASTLTWSQSISPCLHSSAKPFSRCEAKKFRVFCTSDHTQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIMS
Disordered region (IsUnstruct)
**VLLCRASTLTWSQSISPCLHSSAKPFSRCEAKKFRVFCTSDHTQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMF*********QWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALK****
Disordered Region (DISOPRED)
*****CRASTLTWSQSISPCLHSSAKP**R**A*****************MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK****FPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIMS
Disordered Region (DISEMBL)
MDVLLCRASTLTWSQSISPCLHSSAKPFSRCEAKKFRVFCTSDHTQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIMS
Disordered Region (DISPRO)
*DVLLCRASTLTWSQSISPCLHSSAKPFSRCEAKKFRVFCTSDHTQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIMS
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDVLLCRASTLTWSQSISPCLHSSAKPFSRCEAKKFRVFCTSDHTQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIMS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	363	2.2.26 [Sep-21-2011]
P73467	307	Epimerase family protein	N/A	no	0.804	0.951	0.430	6e-62
P77775	297	Epimerase family protein	N/A	no	0.809	0.989	0.363	7e-46
O31574	303	Epimerase family protein	yes	no	0.801	0.960	0.315	9e-37
P71373	296	Epimerase family protein	yes	no	0.776	0.952	0.339	4e-36
Q6GIM1	300	Epimerase family protein	yes	no	0.796	0.963	0.312	2e-35
Q5M8N4	308	Epimerase family protein	yes	no	0.785	0.925	0.320	2e-35
Q17QH8	294	Epimerase family protein	yes	no	0.796	0.982	0.323	4e-35
Q4L4J7	299	Epimerase family protein	yes	no	0.793	0.963	0.315	8e-35
Q2YSF6	300	Epimerase family protein	yes	no	0.796	0.963	0.308	9e-35
Q5HHP9	300	Epimerase family protein	yes	no	0.793	0.96	0.306	9e-35

>sp|P73467|Y1223_SYNY3 Epimerase family protein slr1223 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr1223 PE=3 SV=2

 Score =  238 bits (606), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 140/325 (43%), Positives = 192/325 (59%), Gaps = 33/325 (10%)

Query: 51  MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF-PGKKTRFFPGV-MIAEEP 108
           M + +TGATGF+G  LV  L    H++ +L RS SKA+ +F PG     FP +  IA E 
Sbjct: 1   MKIILTGATGFVGCSLVPLLHQQGHELTLLVRSVSKAQRLFAPGS----FPQLKAIAYEA 56

Query: 109 ----QWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRP 164
                W+  + G  AV+NLAG PI  RW+   K EI +SR   T K+V+ I ++    +P
Sbjct: 57  TKSGDWQKVVDGQDAVINLAGEPISERWTEAYKAEIFDSRKLGTEKLVEAIAKADR--KP 114

Query: 165 SVLELVKPKYLMRAAHQEMITWL------SDYCAKVYCLVSFNRGVLVCREWEGTALKVN 218
            V  ++    +      E  T+        D+ A+            VC+ WE  A +V 
Sbjct: 115 QV--MISGSAIGYYGTSETATFTESSKPGDDFLAE------------VCQAWENAAHQVE 160

Query: 219 K-DVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEAL 277
           +  VRL + RIGIVLG DGGALAKM+P F +FAGGPLGSG+QWFSWI   D++ LI +AL
Sbjct: 161 QLGVRLVVFRIGIVLGADGGALAKMLPPFKLFAGGPLGSGEQWFSWIDRRDLIALIDKAL 220

Query: 278 SNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRV 337
           ++ + RG  N TAPNPV++ E C  LG VL RPSWLPVP+ AL+ +LGEGA +VLEGQ V
Sbjct: 221 TDSTLRGTYNATAPNPVKMKEFCHTLGKVLARPSWLPVPDIALELLLGEGAKLVLEGQEV 280

Query: 338 VPARAKELGFPFKYRYVKDALKAIM 362
           +P    +  F F+   ++ +L+ I+
Sbjct: 281 LPGAISKTDFQFQAPDLETSLRQIL 305

Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708)

>sp|P77775|YFCH_ECOLI Epimerase family protein YfcH OS=Escherichia coli (strain K12) GN=yfcH PE=3 SV=1

 Score =  184 bits (468), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 114/314 (36%), Positives = 169/314 (53%), Gaps = 20/314 (6%)

Query: 51  MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 110
           M + +TG TG IGR L+ RL    HQ+ V+TR+  KA  +  G +   + G  +A++   
Sbjct: 1   MNIVITGGTGLIGRHLIPRLLELGHQITVVTRNPQKASSVL-GPRVTLWQG--LADQSN- 56

Query: 111 RDCIQGSTAVVNLAGTPIGT-RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLEL 169
              + G  AV+NLAG PI   RW+ E K+ + +SR  +T K+VDLIN S           
Sbjct: 57  ---LNGVDAVINLAGEPIADKRWTHEQKERLCQSRWNITQKLVDLINASD---------- 103

Query: 170 VKPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKD-VRLALIRI 228
             P  L+  +       L +                +C  WE  A +   D  R+ L+R 
Sbjct: 104 TPPSVLISGSATGYYGDLGEVVVTEEEPPHNEFTHKLCARWEEIACRAQSDKTRVCLLRT 163

Query: 229 GIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVING 288
           G+VL  DGG L KM+P F +  GGP+GSG+Q+ +WIH+DD+VN I   L N   RG  N 
Sbjct: 164 GVVLAPDGGILGKMLPPFRLGLGGPIGSGRQYLAWIHIDDMVNGILWLLDN-ELRGPFNM 222

Query: 289 TAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFP 348
            +P PVR  +    LG+ L RP+ L VP  A++ ++GE + +VL GQR +P R +E GF 
Sbjct: 223 VSPYPVRNEQFAHALGHALHRPAILRVPATAIRLLMGESSVLVLGGQRALPKRLEEAGFA 282

Query: 349 FKYRYVKDALKAIM 362
           F++  +++AL  ++
Sbjct: 283 FRWYDLEEALADVV 296

Escherichia coli (strain K12) (taxid: 83333)

>sp|O31574|YFHF_BACSU Epimerase family protein YfhF OS=Bacillus subtilis (strain 168) GN=yfhF PE=3 SV=1

 Score =  154 bits (389), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 101/320 (31%), Positives = 155/320 (48%), Gaps = 29/320 (9%)

Query: 51  MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 110
           M +++TG TGF+G+ L   L    H V +L+R+  + E     K   +   +     P+ 
Sbjct: 1   MNIAMTGGTGFLGQHLTGVLTRQGHHVYILSRNARETEQ----KNMTYVQWLSEGAAPE- 55

Query: 111 RDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELV 170
              +      +NLAG  I  RW+ + K+ I  SRI  T +V  LI +  E          
Sbjct: 56  -QELPHIDVWINLAGKSIFGRWTEKTKQHILSSRINATREVQRLIQKQKE---------- 104

Query: 171 KPKYLMRAAHQEMI------TWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNK-DVRL 223
           KPK L++A+   +       T+  D        +S          WE     +    +R 
Sbjct: 105 KPKTLIQASAVGIYGTSLEKTFTEDSATSDEDFLSH-----TAHLWEKEGQHIEAMGIRT 159

Query: 224 ALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYR 283
              R G++LG+ G AL  MI  +   AGG +G+G+QW SWIH++D   +I  A+ N    
Sbjct: 160 VYARFGVMLGEKG-ALPLMILPYKFLAGGTIGTGRQWLSWIHVEDAAQMIRYAVENAGIS 218

Query: 284 GVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAK 343
           G +N TAPNPV + +    +  V  RP WLPVPEF L   LGE + ++++GQR +P +A 
Sbjct: 219 GPMNVTAPNPVDMKQFGKTIARVKHRPHWLPVPEFFLSKALGEMSLLIVKGQRALPKKAI 278

Query: 344 ELGFPFKYRYVKDALKAIMS 363
             GF F Y  ++ AL  +++
Sbjct: 279 TSGFRFTYSDLEFALSQLIA 298

Bacillus subtilis (strain 168) (taxid: 224308)

>sp|P71373|Y1208_HAEIN Epimerase family protein HI_1208 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_1208 PE=3 SV=1

 Score =  152 bits (384), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 109/321 (33%), Positives = 166/321 (51%), Gaps = 39/321 (12%)

Query: 51  MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 110
           M + +TG TG IG+ LV+RL   N QV +LTRS S   L    K  +F   +      + 
Sbjct: 1   MNILLTGGTGLIGKALVERLCLRNEQVTILTRSSSPHTLS-KHKNIKFITALSQLNSQEQ 59

Query: 111 RDCIQGSTAVVNLAGTPIGTR-WSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLEL 169
            D      A++NLAG PI  + WS   K  ++ESR+ +T+++V+ IN+  +         
Sbjct: 60  FD------AIINLAGEPIFHKVWSKNQKSILRESRLSLTTQLVEFINQYQQ--------- 104

Query: 170 VKPKYLMRAA-------HQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVR 222
             P ++  +A        ++ IT  S   AK +          +C++WE  A + N   R
Sbjct: 105 -HPIFISGSATGIYGDQDEQKITETSK-TAKTFT-------AQLCQDWENIAQQANG--R 153

Query: 223 LALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSY 282
           + LIR G+V    GGALAK++P +    GG LG G+Q+F WI L+D+VN I   L +   
Sbjct: 154 VCLIRTGMVFSTKGGALAKILPFYKWGLGGKLGKGEQYFPWIALEDMVNGILFLLDHSEC 213

Query: 283 RGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARA 342
           RG  N  AP  ++  +    L  +L RP++  +P++ L  +LGE A ++LE Q VVP + 
Sbjct: 214 RGAFNFAAPKSIKQHKFNRTLAQLLKRPAFATIPKWLLHFILGERANLLLESQNVVPEKL 273

Query: 343 KELGFPFKY----RYVKDALK 359
              GF F+Y     Y++D LK
Sbjct: 274 LNAGFQFQYADCENYLEDILK 294

Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) (taxid: 71421)

>sp|Q6GIM1|Y825_STAAR Epimerase family protein SAR0825 OS=Staphylococcus aureus (strain MRSA252) GN=SAR0825 PE=3 SV=1

 Score =  149 bits (377), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 157/314 (50%), Gaps = 25/314 (7%)

Query: 55  VTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI 114
           +TG TG +G +LV  ++  +  + +LTR     + I   KK  +   V  A+        
Sbjct: 6   ITGGTGMVGSQLVNEIKKSDSHITILTRH----DQISNNKKISY---VNWAKSGWEHKVP 58

Query: 115 QGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLI---NESPEGV-RPSVLELV 170
           Q    V+NLAG  +  RW+ E K+ +  SRI+ T  + +L    N++P+ +   S     
Sbjct: 59  QNIDVVINLAGATLNKRWTPEYKQTLMLSRIQSTQALYELFKSRNKAPKVLFNASATGYY 118

Query: 171 KPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNK-DVRLALIRIG 229
            P   M                +VY  + F+    +  +WE  A +  +   R+ + R G
Sbjct: 119 PPDLFMS-------------YTEVYKTLPFDFLSDIVYQWERFAQQFEQLGTRVVIGRFG 165

Query: 230 IVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGT 289
           I+L  +GGAL  M   +  + GG LGSGQQW+SWIH++D++  I   ++N S  G  N T
Sbjct: 166 IILSNEGGALQTMKLPYEYYIGGKLGSGQQWYSWIHINDLIQAILFLINNESASGPFNLT 225

Query: 290 APNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPF 349
           AP P R       L   + +P    VP  A++ +LG+ + VVL+ Q+V+P + + LGF F
Sbjct: 226 APIPERQNLFGYTLARAMHKPHETWVPSLAMRLILGQMSTVVLDTQKVLPNKIQALGFQF 285

Query: 350 KYRYVKDALKAIMS 363
           KY  +K AL+ ++S
Sbjct: 286 KYSNLKMALEDLIS 299

Staphylococcus aureus (strain MRSA252) (taxid: 282458)

>sp|Q5M8N4|D39U1_MOUSE Epimerase family protein SDR39U1 OS=Mus musculus GN=Sdr39u1 PE=1 SV=1

 Score =  149 bits (377), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 103/321 (32%), Positives = 161/321 (50%), Gaps = 36/321 (11%)

Query: 51  MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 110
           M V V G TGFIG  + Q L+   H+V++++R         PG+ T             W
Sbjct: 1   MRVLVGGGTGFIGTAVTQLLRGRGHEVKLVSRQPG------PGRIT-------------W 41

Query: 111 RDCIQGS----TAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINESPEGVR 163
            +  +        V+NLAG  I     RW+   +KE+  SR+  T  +   I E+     
Sbjct: 42  SELSESGLPLCDVVINLAGENILNPLRRWNETFQKEVLTSRLDTTHLLAKAITETAH--P 99

Query: 164 PSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRL 223
           P    LV       A +Q  +T   D  +       F+    +  +WE  A    +  R 
Sbjct: 100 PQAWILVTGV----AYYQPSLTKEYDEDSPGGNFDFFSN---LVTKWEAAARLPGESTRQ 152

Query: 224 ALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYR 283
            ++R G+VLG+ GGA++ M+  F +  GGP+GSG+Q+F WIH+ D+  ++  AL     +
Sbjct: 153 VVVRSGVVLGRGGGAISHMLLPFRLGLGGPIGSGRQFFPWIHIGDLAGILNYALEANHVQ 212

Query: 284 GVINGTAP-NPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARA 342
           GV+NG AP +    AE    LG  LGRP+++PVP   ++AV GE A ++LEGQ+VVP R 
Sbjct: 213 GVLNGVAPASTTTNAEFAQALGAALGRPAFIPVPSTVVRAVFGERAIMLLEGQKVVPRRT 272

Query: 343 KELGFPFKYRYVKDALKAIMS 363
              G+ + +  ++ ALK +++
Sbjct: 273 LATGYQYSFPELRAALKDVVA 293

Mus musculus (taxid: 10090)

>sp|Q17QH8|D39U1_BOVIN Epimerase family protein SDR39U1 OS=Bos taurus GN=SDR39U1 PE=2 SV=1

 Score =  149 bits (375), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 103/318 (32%), Positives = 158/318 (49%), Gaps = 29/318 (9%)

Query: 51  MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 110
           M V V G TGFIG  L Q L+A  H+V +++R      + +    T   P          
Sbjct: 1   MRVLVGGGTGFIGTALTQLLKARGHEVTLISRKPGPDRITWDDLTTSGLP---------- 50

Query: 111 RDCIQGSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVL 167
             C     A VNLAG  I     RW++  +KE+  SR+  T  +   I ++P+   P   
Sbjct: 51  -RC----DAAVNLAGENILNPLRRWNAAFQKEVLSSRLETTQTLARAIAKAPQ--PPQAW 103

Query: 168 ELVKPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIR 227
            LV       A +Q  +T   D  +       F+    +  +WE  A       R  ++R
Sbjct: 104 VLVTGV----AYYQPSLTAEYDEDSPGGDFDFFSN---LVTKWEAAARLPGDSTRQVVVR 156

Query: 228 IGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVIN 287
            G+VLG+ GGA+  M+  F +  GGP+GSG Q+F WIH+ D+  ++  AL     +G++N
Sbjct: 157 SGVVLGRGGGAIGHMLLPFRLGLGGPIGSGHQFFPWIHIRDLAGILAHALETSHVQGILN 216

Query: 288 GTAP-NPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLG-EGAFVVLEGQRVVPARAKEL 345
           G AP +    AE    LG  LGRP+++P+P   ++AV G E A ++LEGQ+VVP R    
Sbjct: 217 GVAPASSTTNAEFARALGTALGRPAFIPLPSAVVQAVFGRERAVMLLEGQKVVPRRTLAA 276

Query: 346 GFPFKYRYVKDALKAIMS 363
           G+ + +  +  ALK +++
Sbjct: 277 GYRYSFPELGAALKEVIA 294

Bos taurus (taxid: 9913)

>sp|Q4L4J7|Y2119_STAHJ Epimerase family protein SH2119 OS=Staphylococcus haemolyticus (strain JCSC1435) GN=SH2119 PE=3 SV=1

 Score =  148 bits (373), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 99/314 (31%), Positives = 149/314 (47%), Gaps = 26/314 (8%)

Query: 55  VTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAE--EPQWRD 112
           +TG TG +G +LV +L+  +  + +LTRS  +++           P +      +  W  
Sbjct: 6   ITGGTGMVGSQLVNKLKNRDVHITILTRSDKQSDD----------PKISYVNWSKDGWMS 55

Query: 113 CIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKP 172
            +     VVNLAG  +  RW+   K+ I  SRI+ T  +VDL ++             KP
Sbjct: 56  QVPDIDVVVNLAGATLNKRWTPSYKQLIMTSRIQSTQSLVDLFSQREH----------KP 105

Query: 173 KYLMRAAHQEMI--TWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNK-DVRLALIRIG 229
           + L  A+       +    Y  K Y    F+    V  +WE  A +      R+ L R  
Sbjct: 106 EVLFNASAMGYYPPSLYHTYTEK-YQTHPFDFLSDVVYQWERFAKRFESFGTRVVLGRFS 164

Query: 230 IVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGT 289
           ++L  DGGAL  M   +  F GG LGSG QW+SWIH++D+V  I   + NP+ +G  N  
Sbjct: 165 MILSNDGGALQTMKLPYKFFVGGKLGSGFQWYSWIHINDLVRAILFTIDNPNAKGPFNMA 224

Query: 290 APNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPF 349
           AP   R       L  V+ RP    VP F ++  LGE + VVL+ Q+V+P +   LGF F
Sbjct: 225 APIAERQNLFGYTLARVMHRPHETWVPSFLMRLALGEMSTVVLDTQKVLPNKLDALGFTF 284

Query: 350 KYRYVKDALKAIMS 363
            Y  +K A + ++ 
Sbjct: 285 NYSNLKIAFEDLID 298

Staphylococcus haemolyticus (strain JCSC1435) (taxid: 279808)

>sp|Q2YSF6|Y724_STAAB Epimerase family protein SAB0724c OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=SAB0724c PE=3 SV=1

 Score =  147 bits (372), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 97/314 (30%), Positives = 156/314 (49%), Gaps = 25/314 (7%)

Query: 55  VTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI 114
           +TG TG +G +LV  ++  +  + +LTR     + I   KK  +   V  A+        
Sbjct: 6   ITGGTGMVGSQLVNEIKKSDSHITILTRH----DQISNDKKISY---VNWAKSGWEHKVP 58

Query: 115 QGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLI---NESPEGV-RPSVLELV 170
           Q    V+NLAG  +  RW+ E K+ +  SRI+ T  + +L    N++P+ +   S     
Sbjct: 59  QNIDVVINLAGATLNKRWTPEYKQTLMLSRIQSTQALYELFKSRNKAPKVLFNASATGYY 118

Query: 171 KPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNK-DVRLALIRIG 229
            P   M                +VY  + F+    +  +WE  A +  +   R+ + R G
Sbjct: 119 PPDLFMS-------------YTEVYKTLPFDFLSDIVYQWERFAQQFEQLGTRVVIGRFG 165

Query: 230 IVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGT 289
           I+L  +GGAL  M   +  + GG LGSGQQW+SWIH++D++  I   ++N S  G  N T
Sbjct: 166 IILSNEGGALQTMKLPYEYYIGGKLGSGQQWYSWIHINDLIQAILFLINNESASGPFNLT 225

Query: 290 APNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPF 349
           AP P R       L   + +P     P  A++ +LG+ + VVL+ Q+V+P + + LGF F
Sbjct: 226 APIPERQNLFGYTLARAMHKPHETWAPSLAMRLILGQMSTVVLDTQKVLPNKIQALGFQF 285

Query: 350 KYRYVKDALKAIMS 363
           KY  +K AL+ ++S
Sbjct: 286 KYSNLKIALEDLIS 299

Staphylococcus aureus (strain bovine RF122 / ET3-1) (taxid: 273036)

>sp|Q5HHP9|Y834_STAAC Epimerase family protein SACOL0834 OS=Staphylococcus aureus (strain COL) GN=SACOL0834 PE=3 SV=1

 Score =  147 bits (372), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 96/313 (30%), Positives = 155/313 (49%), Gaps = 25/313 (7%)

Query: 55  VTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI 114
           +TG TG +G +LV  ++  +  + +LTR     + I   KK  +   V  A+        
Sbjct: 6   ITGGTGMVGSQLVNEIKKSDSHITILTRH----DQISNDKKISY---VNWAKSGWEHKVP 58

Query: 115 QGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLI---NESPEGV-RPSVLELV 170
           Q    V+NLAG  +  RW+ E K+ +  SRI+ T  + +L    N++P+ +   S     
Sbjct: 59  QNIDVVINLAGATLNKRWTPEYKQTLMLSRIQSTQALYELFKSRNKAPKALFNASATGYY 118

Query: 171 KPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNK-DVRLALIRIG 229
            P   M                +VY  + F+    +  +WE  A +  +   R+ + R G
Sbjct: 119 PPDLFMS-------------YTEVYKTLPFDFLSDIVYQWERFAQQFEQLGTRVVIGRFG 165

Query: 230 IVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGT 289
           I+L  +GGAL  M   +  + GG LGSGQQW+SWIH++D++  I   ++N S  G  N T
Sbjct: 166 IILSNEGGALQTMKLPYEYYIGGKLGSGQQWYSWIHINDLIQAILFLINNESASGPFNLT 225

Query: 290 APNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPF 349
           AP P R       L   + +P     P  A++ +LG+ + VVL+ Q+V+P + + LGF F
Sbjct: 226 APIPERQNLFGYTLARAMHKPHETWAPSLAMRLILGQMSTVVLDTQKVLPNKIQALGFQF 285

Query: 350 KYRYVKDALKAIM 362
           KY  +K AL+ ++
Sbjct: 286 KYSNLKMALEDLI 298

Staphylococcus aureus (strain COL) (taxid: 93062)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	363
255543879	351	conserved hypothetical protein [Ricinus	0.942	0.974	0.707	1e-139
357473587	350	hypothetical protein MTR_4g072040 [Medic	0.947	0.982	0.685	1e-138
224105291	350	predicted protein [Populus trichocarpa]	0.925	0.96	0.713	1e-138
225427778	357	PREDICTED: epimerase family protein slr1	0.942	0.957	0.682	1e-136
356545053	349	PREDICTED: epimerase family protein slr1	0.944	0.982	0.672	1e-134
363808106	350	uncharacterized protein LOC100813590 [Gl	0.947	0.982	0.658	1e-133
297824979	350	hypothetical protein ARALYDRAFT_900542 [	0.865	0.897	0.699	1e-130
18399648	347	Rossmann-fold NAD(P)-binding domain-cont	0.878	0.919	0.697	1e-129
449461621	348	PREDICTED: epimerase family protein slr1	0.922	0.962	0.662	1e-129
388519265	349	unknown [Lotus japonicus]	0.936	0.974	0.658	1e-129

>gi|255543879|ref|XP_002513002.1| conserved hypothetical protein [Ricinus communis] gi|223548013|gb|EEF49505.1| conserved hypothetical protein [Ricinus communis]

 Score =  502 bits (1292), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 256/362 (70%), Positives = 290/362 (80%), Gaps = 20/362 (5%)

Query: 6   CRAST-LTWSQSISPCLHSSAKPFSRCEAKKFRVFCTSDHTQKASQMTVSVTGATGFIGR 64
           CRA+T LTW++SISP      + FSR + ++  V   SD T K +QMTVSVTGATGFIGR
Sbjct: 5   CRATTALTWTRSISPPSLHIPQSFSRYDTRRLSVCGASDQTPKENQMTVSVTGATGFIGR 64

Query: 65  RLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA 124
           RLVQRL ADNH + VLTRS+SKA+LIFPGK    FP ++IAEEP+W++ IQGS AVVNLA
Sbjct: 65  RLVQRLHADNHNIHVLTRSKSKAQLIFPGKD---FPRIVIAEEPEWKNSIQGSDAVVNLA 121

Query: 125 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMI 184
           G PI TRWSSEIKKEIK+SRIRVTSKVVDLIN+SPEGVRP+VL          ++   + 
Sbjct: 122 GMPISTRWSSEIKKEIKQSRIRVTSKVVDLINDSPEGVRPTVLVSATAVGYYGSSETRVF 181

Query: 185 TWLS----DYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALA 240
              S    DY A             VCREWEGTALKVNKDVRLALIRIG+VLGK+GGALA
Sbjct: 182 DESSPSGNDYLAG------------VCREWEGTALKVNKDVRLALIRIGVVLGKNGGALA 229

Query: 241 KMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMC 300
           KMIPLFMMFAGGPLGSG+QWFSWIHL+DIVNLIYEAL NPSY+GVINGTAPNPVRLAEMC
Sbjct: 230 KMIPLFMMFAGGPLGSGRQWFSWIHLEDIVNLIYEALINPSYKGVINGTAPNPVRLAEMC 289

Query: 301 DHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKA 360
           + LGNVLGRPSWLPVP+FALKAVLGEGA VVL+GQ+V+P +AKELGF FKY YVKDALK 
Sbjct: 290 EQLGNVLGRPSWLPVPDFALKAVLGEGASVVLDGQKVLPTKAKELGFQFKYPYVKDALKT 349

Query: 361 IM 362
           I+
Sbjct: 350 IL 351

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357473587|ref|XP_003607078.1| hypothetical protein MTR_4g072040 [Medicago truncatula] gi|355508133|gb|AES89275.1| hypothetical protein MTR_4g072040 [Medicago truncatula]

 Score =  498 bits (1283), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 249/363 (68%), Positives = 284/363 (78%), Gaps = 19/363 (5%)

Query: 5   LCRASTLTWSQSISPCLHSSAKPFSRCEAKKFRVFCTSDHTQKASQMTVSVTGATGFIGR 64
           + RA+ LTWS ++SP LH         E +KFRV+C +D + K  QM +SVTGATGFIG+
Sbjct: 3   ISRATALTWSHTVSPSLHLPQPLLFTRETRKFRVWCGTDQSSKGDQMIISVTGATGFIGK 62

Query: 65  RLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA 124
           RLVQ+LQA+NH+V VLTRS+SKAELIFP K    FPGV IA EP+W+DCIQGST VVNLA
Sbjct: 63  RLVQKLQAENHRVHVLTRSKSKAELIFPVKD---FPGVKIAGEPEWKDCIQGSTGVVNLA 119

Query: 125 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMI 184
           G PI TRWSSEIKKEIK+SR+RVTSKVVDLI  +P+  RP VL           +  ++ 
Sbjct: 120 GLPISTRWSSEIKKEIKQSRVRVTSKVVDLIKRAPDETRPQVLVSATAVGYYGTSETQVF 179

Query: 185 TWLS----DYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALA 240
              S    DY A+V            CREWE TALK N DVR+ALIRIG+VLGKDGGALA
Sbjct: 180 DEQSPSGKDYLAEV------------CREWESTALKANGDVRVALIRIGVVLGKDGGALA 227

Query: 241 KMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMC 300
           KMIPLFMMFAGGPLGSG QWFSWIHLDDIVNLIYEALSNPSY+GVINGTAPNPVRL+E+C
Sbjct: 228 KMIPLFMMFAGGPLGSGNQWFSWIHLDDIVNLIYEALSNPSYKGVINGTAPNPVRLSELC 287

Query: 301 DHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKA 360
           + LGNVLGRPSWLPVP+FALKAVLGEGA VVLEGQ+VVP +AK+LGF FKY YVKDALKA
Sbjct: 288 EQLGNVLGRPSWLPVPDFALKAVLGEGATVVLEGQKVVPTQAKKLGFSFKYSYVKDALKA 347

Query: 361 IMS 363
           I+S
Sbjct: 348 IIS 350

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224105291|ref|XP_002313756.1| predicted protein [Populus trichocarpa] gi|222850164|gb|EEE87711.1| predicted protein [Populus trichocarpa]

 Score =  496 bits (1277), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 257/360 (71%), Positives = 286/360 (79%), Gaps = 24/360 (6%)

Query: 9   STLTWSQSISPCLHSSAKPFS-RCEAKKFRVFCTSDHTQKASQMTVSVTGATGFIGRRLV 67
           +TLTWS SIS       + FS RC  K+ RV C SD TQK   MTVSVTGATGFIG+RLV
Sbjct: 10  TTLTWSNSISTSSLQIPQVFSIRC-TKRLRVCCASDQTQK---MTVSVTGATGFIGKRLV 65

Query: 68  QRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP 127
           QRL AD H VRVLTRSRSKA+LIFP K+   FPG++IAEE  W+DCIQGS AVVNLAG P
Sbjct: 66  QRLHADKHSVRVLTRSRSKAQLIFPVKE---FPGILIAEERDWKDCIQGSNAVVNLAGLP 122

Query: 128 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWL 187
           I TRWS E+KKEIK+SRI+VTSKVVDLIN SPEGVRP+VL          ++  ++    
Sbjct: 123 ISTRWSPEVKKEIKQSRIKVTSKVVDLINGSPEGVRPAVLVSATAVGYYGSSETQVFDER 182

Query: 188 S----DYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMI 243
           S    DY A+V            CREWE TALKVNKDVRLALIRIG+VLGKDGGALAKMI
Sbjct: 183 SPSGNDYLAEV------------CREWEATALKVNKDVRLALIRIGVVLGKDGGALAKMI 230

Query: 244 PLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHL 303
           PLFM+FAGGP+GSGQQWFSWIHLDDIVNLIYEAL+NPSY+GVINGTAPNPVRLAEMC+ L
Sbjct: 231 PLFMLFAGGPMGSGQQWFSWIHLDDIVNLIYEALTNPSYKGVINGTAPNPVRLAEMCEQL 290

Query: 304 GNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIMS 363
           GNV+GRPSWLPVP+FALKAVLGEGA VVL+GQRV+P RAKELGF FKY  VKDALK I+S
Sbjct: 291 GNVMGRPSWLPVPDFALKAVLGEGASVVLDGQRVLPTRAKELGFQFKYPQVKDALKTILS 350

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225427778|ref|XP_002268617.1| PREDICTED: epimerase family protein slr1223 [Vitis vinifera] gi|297744722|emb|CBI37984.3| unnamed protein product [Vitis vinifera]

 Score =  489 bits (1259), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 251/368 (68%), Positives = 285/368 (77%), Gaps = 26/368 (7%)

Query: 5   LCRAST-LTWSQSISPCLHSSAKPFSRCEAKKFRVFCT-----SDHTQKASQMTVSVTGA 58
           LCR +   +W+ SISP LH   + FS CE+K  RV C      S  +QK +QM VSVTGA
Sbjct: 3   LCRTTAAFSWAHSISPSLHFPQR-FSMCESKGLRVCCAVNASASGQSQKENQMIVSVTGA 61

Query: 59  TGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGST 118
           TGFIGRRLVQRL ADNH+V VLTRSRSKA+ IFP K    F G++IAEEP+W+DCIQGS 
Sbjct: 62  TGFIGRRLVQRLLADNHRVHVLTRSRSKAQFIFPAKD---FRGIVIAEEPEWKDCIQGSN 118

Query: 119 AVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRA 178
           AVVNLAG PI TRWS EIKKEIKESR+R+TSKVVD+IN S + VRP+VL          A
Sbjct: 119 AVVNLAGMPISTRWSPEIKKEIKESRVRITSKVVDIINNSQDEVRPTVLVSASAIGYYGA 178

Query: 179 AH----QEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGK 234
           +     +E     +DY A+V            CREWEG A KVNKDVRL LIRIG+VLGK
Sbjct: 179 SETLVFKEQSPSGNDYLAEV------------CREWEGKAFKVNKDVRLVLIRIGVVLGK 226

Query: 235 DGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPV 294
           DGGALAKMIPLF +FAGGPLGSG+QWFSWIHLDDIV LIYEALSNPSY GVINGTAPNPV
Sbjct: 227 DGGALAKMIPLFNLFAGGPLGSGKQWFSWIHLDDIVELIYEALSNPSYTGVINGTAPNPV 286

Query: 295 RLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYV 354
           RLAEMCDHLGN +GRPSWLPVP+FALKAVLGEGA VVL+GQ+V+PARA++LGF FKY YV
Sbjct: 287 RLAEMCDHLGNAMGRPSWLPVPDFALKAVLGEGASVVLDGQKVLPARAQQLGFTFKYPYV 346

Query: 355 KDALKAIM 362
           KDAL+AI+
Sbjct: 347 KDALRAIL 354

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356545053|ref|XP_003540960.1| PREDICTED: epimerase family protein slr1223-like [Glycine max]

 Score =  484 bits (1247), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 244/363 (67%), Positives = 281/363 (77%), Gaps = 20/363 (5%)

Query: 5   LCRASTLTWSQSISPCLHSSAKPFSRCEAKKFRVFCTSDHTQKASQMTVSVTGATGFIGR 64
           +C A+ LTWS +I P LH   +  S  EA+ F V+C SD   K ++M +SVTGATGFIGR
Sbjct: 3   MCGATALTWSHTICPSLHL-PRSVSTREARSFCVWCVSDQDPKGNKMIISVTGATGFIGR 61

Query: 65  RLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA 124
           RLVQRL ADNH V VLTRS+SKAE IFP K    FPG+ IAEEP+W+D +QGST VVNLA
Sbjct: 62  RLVQRLHADNHSVHVLTRSKSKAETIFPAKD---FPGIKIAEEPEWKDSVQGSTGVVNLA 118

Query: 125 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMI 184
           G PI TRWS EIKKEIK+SRIRVTSKV +LIN +P+ +RP V            +  ++ 
Sbjct: 119 GLPISTRWSPEIKKEIKQSRIRVTSKVAELINSAPDDIRPKVFVSATAVGYYGTSETQVF 178

Query: 185 TWLS----DYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALA 240
              S    DY A+V            CREWE TALKVN DVR+ALIRIG+VLGKDGGAL 
Sbjct: 179 DEQSPSGKDYLAEV------------CREWESTALKVNGDVRVALIRIGVVLGKDGGALV 226

Query: 241 KMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMC 300
           KMIP+F +FAGGPLGSG+QWFSWIHL+DIVNLIYEALSNPSY+GVINGTAPNPVRLAE+C
Sbjct: 227 KMIPIFNLFAGGPLGSGKQWFSWIHLEDIVNLIYEALSNPSYKGVINGTAPNPVRLAELC 286

Query: 301 DHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKA 360
           D LGNVLGRPSWLPVP+FALKAVLGEGA VVLEGQRV+P +AK+LGFPFKY YVKDAL+A
Sbjct: 287 DQLGNVLGRPSWLPVPDFALKAVLGEGATVVLEGQRVLPIQAKKLGFPFKYPYVKDALQA 346

Query: 361 IMS 363
           I+S
Sbjct: 347 ILS 349

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363808106|ref|NP_001241963.1| uncharacterized protein LOC100813590 [Glycine max] gi|255639021|gb|ACU19811.1| unknown [Glycine max]

 Score =  480 bits (1235), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 239/363 (65%), Positives = 276/363 (76%), Gaps = 19/363 (5%)

Query: 5   LCRASTLTWSQSISPCLHSSAKPFSRCEAKKFRVFCTSDHTQKASQMTVSVTGATGFIGR 64
           +C A+ LTWS +I P LH      +R   + F V+C SD   K ++M +SVTGATGFIGR
Sbjct: 3   MCGATALTWSHTICPSLHLPRSVSTREARRSFSVWCVSDQDPKGNKMIISVTGATGFIGR 62

Query: 65  RLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA 124
           RLVQRL ADNH V VLTRS+S AE IFP K    FPG+ IAEEP+W+D IQGST VVNLA
Sbjct: 63  RLVQRLHADNHSVHVLTRSKSNAETIFPAKD---FPGIKIAEEPEWKDSIQGSTGVVNLA 119

Query: 125 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMI 184
           G PI TRWS EIKKEIK+SRIRVTSKVV+LIN +P+ +RP V            +  ++ 
Sbjct: 120 GLPISTRWSPEIKKEIKQSRIRVTSKVVELINSAPDDIRPKVFVSATAVGYYSTSETQVF 179

Query: 185 TWLS----DYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALA 240
              S    DY A+V            CREWE TALKVN  VR+ALIRIG+VLGKDGGALA
Sbjct: 180 DEQSPSGKDYLAEV------------CREWESTALKVNGGVRVALIRIGVVLGKDGGALA 227

Query: 241 KMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMC 300
           KMIP+F +FAGGPLGSG QWFSWIHL+DIVNLIYE LSNPSY+GVINGTAPNPVRLAE+C
Sbjct: 228 KMIPMFKLFAGGPLGSGTQWFSWIHLEDIVNLIYETLSNPSYKGVINGTAPNPVRLAELC 287

Query: 301 DHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKA 360
           D LG+ LGRPSWLPVP+FALKAVLGEGA VVLEGQ+V+P +AK+LGFPFKY YVKDAL+A
Sbjct: 288 DQLGHALGRPSWLPVPDFALKAVLGEGATVVLEGQKVLPTQAKKLGFPFKYSYVKDALQA 347

Query: 361 IMS 363
           I+S
Sbjct: 348 ILS 350

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297824979|ref|XP_002880372.1| hypothetical protein ARALYDRAFT_900542 [Arabidopsis lyrata subsp. lyrata] gi|297326211|gb|EFH56631.1| hypothetical protein ARALYDRAFT_900542 [Arabidopsis lyrata subsp. lyrata]

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 233/333 (69%), Positives = 267/333 (80%), Gaps = 19/333 (5%)

Query: 34  KKFRVFCTSDHTQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG 93
           ++F V C+S+ +QK +QMTVSVTGATGFIGR+LVQRL+ADNH +RVLTRS+SKAE IFP 
Sbjct: 32  RRFMVLCSSEKSQKENQMTVSVTGATGFIGRKLVQRLRADNHSIRVLTRSKSKAEQIFPA 91

Query: 94  KKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVD 153
           K    FPG++IAEE  W++C+QGSTAVVNLAG PI TRWS EIKKEIK+SRIR+TSKVVD
Sbjct: 92  KD---FPGIVIAEESDWKNCVQGSTAVVNLAGLPISTRWSPEIKKEIKDSRIRITSKVVD 148

Query: 154 LINESPEGVRPSVLELVKPKYLMRAAHQEMITWLS----DYCAKVYCLVSFNRGVLVCRE 209
           LIN SP   RP+VL           +   +    S    DY A+            VCRE
Sbjct: 149 LINNSPAEARPTVLVSATAVGYYGTSETGVFDENSPSGKDYLAE------------VCRE 196

Query: 210 WEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDI 269
           WEGTALK NKDVR+ALIRIG+VLGKDGGALA MIP F MFAGGPLGSGQQWFSWIH+DD+
Sbjct: 197 WEGTALKANKDVRVALIRIGVVLGKDGGALAMMIPFFQMFAGGPLGSGQQWFSWIHVDDL 256

Query: 270 VNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAF 329
           VNLIYEAL+NPSY+GVINGTAPNPVRL EMC  LG+VL RPSWLPVP+FALKA+LGEGA 
Sbjct: 257 VNLIYEALTNPSYQGVINGTAPNPVRLGEMCQQLGSVLSRPSWLPVPDFALKALLGEGAT 316

Query: 330 VVLEGQRVVPARAKELGFPFKYRYVKDALKAIM 362
           VVLEGQ+V+P RAKELGF FKY+YVKDAL+AIM
Sbjct: 317 VVLEGQKVLPVRAKELGFEFKYKYVKDALRAIM 349

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18399648|ref|NP_565505.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] gi|11692898|gb|AAG40052.1|AF324701_1 At2g21280 [Arabidopsis thaliana] gi|11908096|gb|AAG41477.1|AF326895_1 unknown protein [Arabidopsis thaliana] gi|12642906|gb|AAK00395.1|AF339713_1 unknown protein [Arabidopsis thaliana] gi|20197908|gb|AAD23676.2| expressed protein [Arabidopsis thaliana] gi|23397230|gb|AAN31897.1| unknown protein [Arabidopsis thaliana] gi|34787115|emb|CAD56855.1| SulA protein [Arabidopsis thaliana] gi|330252061|gb|AEC07155.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana]

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 238/341 (69%), Positives = 268/341 (78%), Gaps = 22/341 (6%)

Query: 26  KPFSRCEAKKFRVFCTSDHTQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS 85
           + FS    ++F V C+S   QK SQMTVSVTGATGFIGRRLVQRL+ADNH +RVLTRS+S
Sbjct: 24  RSFSMPGTRRFMVLCSS---QKESQMTVSVTGATGFIGRRLVQRLRADNHAIRVLTRSKS 80

Query: 86  KAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRI 145
           KAE IFP K    FPG++IAEE +W++C+QGSTAVVNLAG PI TRWS EIKKEIK SRI
Sbjct: 81  KAEQIFPAKD---FPGIVIAEESEWKNCVQGSTAVVNLAGLPISTRWSPEIKKEIKGSRI 137

Query: 146 RVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLS----DYCAKVYCLVSFN 201
           RVTSKVVDLIN SP   RP+VL           +   +    S    DY A+        
Sbjct: 138 RVTSKVVDLINNSPAEARPTVLVSATAVGYYGTSETGVFDENSPSGKDYLAE-------- 189

Query: 202 RGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWF 261
               VCREWEGTALK NKDVR+ALIRIG+VLGKDGGALA MIP F MFAGGPLGSGQQWF
Sbjct: 190 ----VCREWEGTALKANKDVRVALIRIGVVLGKDGGALAMMIPFFQMFAGGPLGSGQQWF 245

Query: 262 SWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALK 321
           SWIH+DD+VNLIYEAL+NPSY+GVINGTAPNPVRL EMC  LG+VL RPSWLPVP+FALK
Sbjct: 246 SWIHVDDLVNLIYEALTNPSYKGVINGTAPNPVRLGEMCQQLGSVLSRPSWLPVPDFALK 305

Query: 322 AVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIM 362
           A+LGEGA VVLEGQ+V+P RAKELGF FKY+YVKDAL+AIM
Sbjct: 306 ALLGEGATVVLEGQKVLPVRAKELGFEFKYKYVKDALRAIM 346

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449461621|ref|XP_004148540.1| PREDICTED: epimerase family protein slr1223-like [Cucumis sativus]

 Score =  467 bits (1201), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 241/364 (66%), Positives = 281/364 (77%), Gaps = 29/364 (7%)

Query: 8   ASTLTWSQSISPCLHSSAKP--FSRCEAKKFRVFCTSDHTQKASQMTVSVTGATGFIGRR 65
           A + +WS+++S   HS   P   + C   +FRVFC  D T+  +Q+TVS+TGATGFIGRR
Sbjct: 6   AISFSWSRTVS---HSLRIPQHLAIC-GNRFRVFCAIDATKMKNQLTVSITGATGFIGRR 61

Query: 66  LVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 125
           LVQRL AD H +RVLTRS+SKAELIFP ++   FPG+MIAEEP W++CIQGS  VVNLAG
Sbjct: 62  LVQRLHADKHNIRVLTRSKSKAELIFPARE---FPGIMIAEEPGWKNCIQGSDGVVNLAG 118

Query: 126 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMIT 185
            PI TRWSSEIKKEIK+SRIRVTSKVV LIN++P+  RP+VL  V    +      E  T
Sbjct: 119 MPISTRWSSEIKKEIKQSRIRVTSKVVSLINDAPDAARPTVL--VSATAVGYYGTSETAT 176

Query: 186 WL------SDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL 239
           +       +DY A+V            CREWE TAL VNK+VR+ALIRIG+VLGK+GGAL
Sbjct: 177 FDERSPSGNDYLAQV------------CREWEATALGVNKNVRVALIRIGVVLGKEGGAL 224

Query: 240 AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEM 299
           AKMIPLFMMFAGGPLGSG+QWFSWIHLDDIVNLIYEAL NPSY+GVINGTAPNPV L E+
Sbjct: 225 AKMIPLFMMFAGGPLGSGKQWFSWIHLDDIVNLIYEALINPSYQGVINGTAPNPVTLGEL 284

Query: 300 CDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALK 359
           C  LG  +GRPSWLPVP+FALKAVLGEGA VVLEGQ+VVP RAKELGF +KY  VKDALK
Sbjct: 285 CKGLGAEMGRPSWLPVPDFALKAVLGEGASVVLEGQKVVPTRAKELGFSYKYPSVKDALK 344

Query: 360 AIMS 363
           +I+S
Sbjct: 345 SILS 348

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388519265|gb|AFK47694.1| unknown [Lotus japonicus]

 Score =  466 bits (1199), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 237/360 (65%), Positives = 278/360 (77%), Gaps = 20/360 (5%)

Query: 8   ASTLTWSQSISPCLHSSAKPFSRCEAKKFRVFCTSDHTQKASQMTVSVTGATGFIGRRLV 67
           A+ LT S ++ P LH   +P S  E + FRV+C+SD +   +QM +SVTGATGFIGRRLV
Sbjct: 6   ATALTSSHTVCPSLHL-LRPLSTREGRSFRVWCSSDQSSMGNQMIISVTGATGFIGRRLV 64

Query: 68  QRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP 127
           Q+L A+NH V VLTRS+SKAELIFP K    FPG+ IAEE +W++ IQGST VVNLAG P
Sbjct: 65  QKLHAENHGVHVLTRSKSKAELIFPVKD---FPGIKIAEESEWKNSIQGSTGVVNLAGLP 121

Query: 128 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSV-LELVKPKYLMRAAHQ---EM 183
           I TRWSSEIKKEIK+SRIRVTSKV +LIN +P+ +RP V +      Y   +  Q   E 
Sbjct: 122 ISTRWSSEIKKEIKQSRIRVTSKVAELINSAPDDIRPKVFVSATAVGYYGTSETQVFDEQ 181

Query: 184 ITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMI 243
               +DY A+V            CREWE TAL+VN DVR+ALIRIG+VLGK+GGALAKMI
Sbjct: 182 SPSGNDYLAEV------------CREWESTALRVNGDVRVALIRIGVVLGKEGGALAKMI 229

Query: 244 PLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHL 303
           PLF MFAGGPLGSG QWFSWIHLDDIV+LIYEAL NPSY+GVINGTAPNPVR AE+C  L
Sbjct: 230 PLFKMFAGGPLGSGNQWFSWIHLDDIVDLIYEALRNPSYKGVINGTAPNPVRFAELCVQL 289

Query: 304 GNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIMS 363
           G+V+GRPSWLPVP+ ALKAVLGEGA VVLEGQ+V+P +AK+LGF FKY YVKDALKAI+S
Sbjct: 290 GHVMGRPSWLPVPDIALKAVLGEGAAVVLEGQKVLPTQAKKLGFAFKYSYVKDALKAILS 349

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	363
TAIR|locus:2050090	347	SULA [Arabidopsis thaliana (ta	0.947	0.991	0.682	2e-120
UNIPROTKB|P77775	297	yfcH "conserved protein with N	0.809	0.989	0.372	3.4e-45
UNIPROTKB|Q8ED48	296	yfcH "Predicted nucleoside-dip	0.432	0.530	0.436	2.3e-44
TIGR_CMR|SO_2922	296	SO_2922 "conserved hypothetica	0.432	0.530	0.436	2.3e-44
UNIPROTKB|Q60BH9	300	MCA0496 "Putative uncharacteri	0.804	0.973	0.365	8.4e-42
UNIPROTKB|Q4K6B2	302	PFL_5142 "Uncharacterized prot	0.426	0.513	0.429	9.5e-42
UNIPROTKB|Q605N7	309	MCA2243 "Putative uncharacteri	0.809	0.951	0.327	3e-37
UNIPROTKB|Q81YW5	301	BAS0486 "Cell division inhibit	0.815	0.983	0.311	3e-37
TIGR_CMR|BA_0515	301	BA_0515 "cell division inhibit	0.815	0.983	0.311	3e-37
UNIPROTKB|Q48MT6	335	PSPPH_1015 "Uncharacterized pr	0.870	0.943	0.317	1.9e-35

TAIR|locus:2050090 SULA [Arabidopsis thaliana (taxid:3702)]

 Score = 1185 (422.2 bits), Expect = 2.0e-120, P = 2.0e-120
 Identities = 245/359 (68%), Positives = 279/359 (77%)

Query:     4 LLCRASTLTWSQSISPCLHSSAKPFSRCEAKKFRVFCTSDHTQKASQMTVSVTGATGFIG 63
             LLC  ++L+ S ++S  L    + FS    ++F V C+S   QK SQMTVSVTGATGFIG
Sbjct:     3 LLCSPTSLSSSFALSSAL-LVPRSFSMPGTRRFMVLCSS---QKESQMTVSVTGATGFIG 58

Query:    64 RRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNL 123
             RRLVQRL+ADNH +RVLTRS+SKAE IFP K    FPG++IAEE +W++C+QGSTAVVNL
Sbjct:    59 RRLVQRLRADNHAIRVLTRSKSKAEQIFPAKD---FPGIVIAEESEWKNCVQGSTAVVNL 115

Query:   124 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEM 183
             AG PI TRWS EIKKEIK SRIRVTSKVVDLIN SP   RP+VL           +   +
Sbjct:   116 AGLPISTRWSPEIKKEIKGSRIRVTSKVVDLINNSPAEARPTVLVSATAVGYYGTSETGV 175

Query:   184 ITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMI 243
                 S    K Y L        VCREWEGTALK NKDVR+ALIRIG+VLGKDGGALA MI
Sbjct:   176 FDENSP-SGKDY-LAE------VCREWEGTALKANKDVRVALIRIGVVLGKDGGALAMMI 227

Query:   244 PLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHL 303
             P F MFAGGPLGSGQQWFSWIH+DD+VNLIYEAL+NPSY+GVINGTAPNPVRL EMC  L
Sbjct:   228 PFFQMFAGGPLGSGQQWFSWIHVDDLVNLIYEALTNPSYKGVINGTAPNPVRLGEMCQQL 287

Query:   304 GNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIM 362
             G+VL RPSWLPVP+FALKA+LGEGA VVLEGQ+V+P RAKELGF FKY+YVKDAL+AIM
Sbjct:   288 GSVLSRPSWLPVPDFALKALLGEGATVVLEGQKVLPVRAKELGFEFKYKYVKDALRAIM 346

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009536 "plastid" evidence=IDA

GO:0010020 "chloroplast fission" evidence=IMP

GO:0006098 "pentose-phosphate shunt" evidence=RCA

GO:0010027 "thylakoid membrane organization" evidence=RCA

GO:0016117 "carotenoid biosynthetic process" evidence=RCA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA

UNIPROTKB|P77775 yfcH "conserved protein with NAD(P)-binding Rossmann-fold domain" [Escherichia coli K-12 (taxid:83333)]

 Score = 475 (172.3 bits), Expect = 3.4e-45, P = 3.4e-45
 Identities = 117/314 (37%), Positives = 173/314 (55%)

Query:    51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 110
             M + +TG TG IGR L+ RL    HQ+ V+TR+  KA  +  G +   + G  +A++   
Sbjct:     1 MNIVITGGTGLIGRHLIPRLLELGHQITVVTRNPQKASSVL-GPRVTLWQG--LADQSN- 56

Query:   111 RDCIQGSTAVVNLAGTPIGT-RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLEL 169
                + G  AV+NLAG PI   RW+ E K+ + +SR  +T K+VDLIN S     PSVL  
Sbjct:    57 ---LNGVDAVINLAGEPIADKRWTHEQKERLCQSRWNITQKLVDLINASD--TPPSVLIS 111

Query:   170 VKPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKD-VRLALIRI 228
                        + ++T       +      F   +  C  WE  A +   D  R+ L+R 
Sbjct:   112 GSATGYYGDLGEVVVTEEEPPHNE------FTHKL--CARWEEIACRAQSDKTRVCLLRT 163

Query:   229 GIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVING 288
             G+VL  DGG L KM+P F +  GGP+GSG+Q+ +WIH+DD+VN I   L N   RG  N 
Sbjct:   164 GVVLAPDGGILGKMLPPFRLGLGGPIGSGRQYLAWIHIDDMVNGILWLLDN-ELRGPFNM 222

Query:   289 TAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFP 348
              +P PVR  +    LG+ L RP+ L VP  A++ ++GE + +VL GQR +P R +E GF 
Sbjct:   223 VSPYPVRNEQFAHALGHALHRPAILRVPATAIRLLMGESSVLVLGGQRALPKRLEEAGFA 282

Query:   349 FKYRYVKDALKAIM 362
             F++  +++AL  ++
Sbjct:   283 FRWYDLEEALADVV 296

GO:0050662 "coenzyme binding" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|Q8ED48 yfcH "Predicted nucleoside-diphosphate sugar epimerase YfcH" [Shewanella oneidensis MR-1 (taxid:211586)]

 Score = 344 (126.2 bits), Expect = 2.3e-44, Sum P(2) = 2.3e-44
 Identities = 69/158 (43%), Positives = 98/158 (62%)

Query:   206 VCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIH 265
             +C+EWE  ALK     R+ ++R GIVLG  GGALAKM+P F +  GGP+G G+Q  SWIH
Sbjct:   139 ICKEWERLALKATSKTRVCILRTGIVLGH-GGALAKMLPPFKLGIGGPIGHGRQGMSWIH 197

Query:   266 LDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLG 325
             + D+V LI   L +    G+ N TAP PV   E    LG VL RP+++  P   L+  +G
Sbjct:   198 MHDMVALIEFLLCHQECHGIFNATAPYPVSNTEFSKTLGKVLNRPAFMTTPVPVLRLAMG 257

Query:   326 EGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIMS 363
             E A ++ EGQ V+P  A + GF F++  ++ ALK +++
Sbjct:   258 EMADLLTEGQFVLPKHALDAGFTFRFEQLEPALKDLLA 295

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|SO_2922 SO_2922 "conserved hypothetical protein" [Shewanella oneidensis MR-1 (taxid:211586)]

 Score = 344 (126.2 bits), Expect = 2.3e-44, Sum P(2) = 2.3e-44
 Identities = 69/158 (43%), Positives = 98/158 (62%)

Query:   206 VCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIH 265
             +C+EWE  ALK     R+ ++R GIVLG  GGALAKM+P F +  GGP+G G+Q  SWIH
Sbjct:   139 ICKEWERLALKATSKTRVCILRTGIVLGH-GGALAKMLPPFKLGIGGPIGHGRQGMSWIH 197

Query:   266 LDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLG 325
             + D+V LI   L +    G+ N TAP PV   E    LG VL RP+++  P   L+  +G
Sbjct:   198 MHDMVALIEFLLCHQECHGIFNATAPYPVSNTEFSKTLGKVLNRPAFMTTPVPVLRLAMG 257

Query:   326 EGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIMS 363
             E A ++ EGQ V+P  A + GF F++  ++ ALK +++
Sbjct:   258 EMADLLTEGQFVLPKHALDAGFTFRFEQLEPALKDLLA 295

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

UNIPROTKB|Q60BH9 MCA0496 "Putative uncharacterized protein" [Methylococcus capsulatus str. Bath (taxid:243233)]

 Score = 443 (161.0 bits), Expect = 8.4e-42, P = 8.4e-42
 Identities = 114/312 (36%), Positives = 164/312 (52%)

Query:    51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAE-EPQ 109
             M + VTG TGFIGR L +RL    H++ VL+R          G+     P   I    PQ
Sbjct:     1 MHLLVTGGTGFIGRSLCRRLLERGHRLTVLSRQAPDTVRRLCGETV--MPVAAIDSLSPQ 58

Query:   110 WRDCIQGSTAVVNLAGTPIGT-RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLE 168
                   G  AVVNLAG PI   RW+   K+ + ESR+ +T+ +VD I  + E   P ++ 
Sbjct:    59 -----AGFDAVVNLAGEPIADKRWTEARKRLLWESRVGLTTALVDYIARA-ESKPPVLIS 112

Query:   169 LVKPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKV-NKDVRLALIR 227
                  Y          T L +  A          G  +C  WE  A +     VR+ ++R
Sbjct:   113 GSAVGYYGNRGD----TLLDEESAH-----GDGFGHRLCAAWEEAASRAAGHGVRVCMLR 163

Query:   228 IGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVIN 287
              G+V+G++GG L +M+PLF +  GG +G G+QW SWIHLDD + +    + +    G  N
Sbjct:   164 TGLVVGRNGGFLQRMLPLFRLGLGGRIGEGRQWMSWIHLDDHIAITEYLIEDAHLEGAFN 223

Query:   288 GTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGF 347
              TAPNPV   E  + L  +L RP+ LPVP F L+  LGE A ++L GQRV+P R ++  F
Sbjct:   224 ATAPNPVTNREFTECLARLLNRPAPLPVPAFTLRLALGETAELLLGGQRVIPKRLQQEPF 283

Query:   348 PFKYRYVKDALK 359
              F+Y ++++AL+
Sbjct:   284 RFRYEHLENALR 295

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q4K6B2 PFL_5142 "Uncharacterized protein" [Pseudomonas protegens Pf-5 (taxid:220664)]

 Score = 330 (121.2 bits), Expect = 9.5e-42, Sum P(2) = 9.5e-42
 Identities = 67/156 (42%), Positives = 95/156 (60%)

Query:   206 VCREWEGTALKVNK-DVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWI 264
             +C  WE TA +     VR+ L+R G+VL  +GG L++++  F +  GGP+G+G+QW  WI
Sbjct:   140 LCIAWEETAQRAEAMGVRVVLVRTGLVLSPEGGFLSRLLLPFKLGLGGPIGNGRQWMPWI 199

Query:   265 HLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVL 324
             H+DD + LI   +  P  +G  N  AP PVR  E    LG VL RP+ +P+P F L+  L
Sbjct:   200 HIDDQIALIDFLVHQPGAQGPYNACAPKPVRNREFAKTLGRVLHRPALIPLPAFFLRLAL 259

Query:   325 GEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKA 360
             GE + ++L GQR VPAR  E GF F++  +  AL A
Sbjct:   260 GELSLLLLGGQRAVPARLLEAGFTFQFTDLPAALDA 295

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q605N7 MCA2243 "Putative uncharacterized protein" [Methylococcus capsulatus str. Bath (taxid:243233)]

 Score = 400 (145.9 bits), Expect = 3.0e-37, P = 3.0e-37
 Identities = 104/318 (32%), Positives = 164/318 (51%)

Query:    51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 110
             M + VTG TGFIG RL Q L     ++ VL+R   +        + R   G+ +     +
Sbjct:     1 MRILVTGGTGFIGSRLCQELGGSGARLVVLSRRPDRV-------RDRC--GLGVTAITAF 51

Query:   111 RDCIQGST--AVVNLAGTP-IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVL 167
              D         V+NLAG P +G RW+   K+ + +SR+ +T  +VD    +         
Sbjct:    52 SDLSPSLVFDVVINLAGEPLVGPRWTDARKRLLWDSRVELTRSLVDYFERAK-------- 103

Query:   168 ELVKPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNK-DVRLALI 226
               VKPK L+  +         D         +   G  +C  WE  AL+  +  VR+ ++
Sbjct:   104 --VKPKLLISGSAVGFYGDQGDRILDESSAPADGFGHRLCNAWESAALRATEFGVRVCIL 161

Query:   227 RIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVI 286
             R G+V+G  GG LA ++PLF +  G  +GSG+QW SWI L D + +I   ++ P + G+ 
Sbjct:   162 RAGLVMGSSGGFLAPLLPLFRLGLGVRIGSGEQWMSWICLRDYIAIIRWLIATPEFSGIF 221

Query:   287 NGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLG-EGAFVVLEGQRVVPARAKEL 345
             N TAPNPV      + L  +LG+P++L VP   ++A++G E + ++L  QRV+PAR  E 
Sbjct:   222 NATAPNPVTNRRFTETLSGLLGKPAFLVVPARLVRALMGREMSGLLLGSQRVLPARLLES 281

Query:   346 GFPFKYRYVKDALKAIMS 363
             GF F+   ++ AL+ ++S
Sbjct:   282 GFRFRCPELEMALRDVLS 299

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q81YW5 BAS0486 "Cell division inhibitor-like protein" [Bacillus anthracis (taxid:1392)]

 Score = 400 (145.9 bits), Expect = 3.0e-37, P = 3.0e-37
 Identities = 98/315 (31%), Positives = 160/315 (50%)

Query:    51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKK-TRFFPGVMIAEEPQ 109
             M ++++G TGFIG  L        + V +LTR ++  E   P  +  ++ P +     P 
Sbjct:     1 MKIAISGGTGFIGTYLSTFFIQKGYTVYILTRKKT-TETSHPNLQYVQWTPDLQTF--P- 56

Query:   110 WRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLEL 169
                 +     V+NLAG  I +RW+ + KK I  SRI+ T  ++  +   P   +P     
Sbjct:    57 ----LSSIDVVINLAGESINSRWTKKQKKIILNSRIQTTKGLIKQLQALP--AKPHTF-- 108

Query:   170 VKPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNK-DVRLALIRI 228
             +    +      E  ++   +       ++ N        WE  A K     +R    R 
Sbjct:   109 INASAIGYYGTSETESFTEQHVTPGNDFLA-N----TVYSWEQEASKARSLGIRTIYARF 163

Query:   229 GIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVING 288
             G++LG DGGAL KM+  +  + GG +GSG+QW SWIH+DD+ ++I   +      G +N 
Sbjct:   164 GVILGPDGGALPKMLLPYQFYIGGTVGSGKQWLSWIHIDDVASMIDFIIHKKEIDGPLNI 223

Query:   289 TAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFP 348
             TAP P+R+    + +  ++ +P WLPVP F L A+LGE + +VLEGQ V+P++A E G+ 
Sbjct:   224 TAPEPIRMKGFGETIATIMKKPHWLPVPSFMLHALLGEMSILVLEGQHVLPSKAIEHGYQ 283

Query:   349 FKYRYVKDALKAIMS 363
             + +  +  AL+ I+S
Sbjct:   284 YTFPTIDHALQNILS 298

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|BA_0515 BA_0515 "cell division inhibitor-like protein" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 400 (145.9 bits), Expect = 3.0e-37, P = 3.0e-37
 Identities = 98/315 (31%), Positives = 160/315 (50%)

Query:    51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKK-TRFFPGVMIAEEPQ 109
             M ++++G TGFIG  L        + V +LTR ++  E   P  +  ++ P +     P 
Sbjct:     1 MKIAISGGTGFIGTYLSTFFIQKGYTVYILTRKKT-TETSHPNLQYVQWTPDLQTF--P- 56

Query:   110 WRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLEL 169
                 +     V+NLAG  I +RW+ + KK I  SRI+ T  ++  +   P   +P     
Sbjct:    57 ----LSSIDVVINLAGESINSRWTKKQKKIILNSRIQTTKGLIKQLQALP--AKPHTF-- 108

Query:   170 VKPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNK-DVRLALIRI 228
             +    +      E  ++   +       ++ N        WE  A K     +R    R 
Sbjct:   109 INASAIGYYGTSETESFTEQHVTPGNDFLA-N----TVYSWEQEASKARSLGIRTIYARF 163

Query:   229 GIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVING 288
             G++LG DGGAL KM+  +  + GG +GSG+QW SWIH+DD+ ++I   +      G +N 
Sbjct:   164 GVILGPDGGALPKMLLPYQFYIGGTVGSGKQWLSWIHIDDVASMIDFIIHKKEIDGPLNI 223

Query:   289 TAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFP 348
             TAP P+R+    + +  ++ +P WLPVP F L A+LGE + +VLEGQ V+P++A E G+ 
Sbjct:   224 TAPEPIRMKGFGETIATIMKKPHWLPVPSFMLHALLGEMSILVLEGQHVLPSKAIEHGYQ 283

Query:   349 FKYRYVKDALKAIMS 363
             + +  +  AL+ I+S
Sbjct:   284 YTFPTIDHALQNILS 298

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q48MT6 PSPPH_1015 "Uncharacterized protein" [Pseudomonas syringae pv. phaseolicola 1448A (taxid:264730)]

 Score = 383 (139.9 bits), Expect = 1.9e-35, P = 1.9e-35
 Identities = 110/347 (31%), Positives = 172/347 (49%)

Query:    24 SAKPFSRCEAKKFRVF-CTSDHTQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTR 82
             S +   R    K R+  C + H  + S M + +TG TG IGR L +   A  H++ V +R
Sbjct:     9 SGQASRRSSLVKIRLLNCHARHA-RLSAMHILLTGGTGLIGRALCRFWSAQGHELTVWSR 67

Query:    83 SRSK-AELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGTR-WSSEIKKEI 140
               +  AEL   G   R   G+   +E       Q   A+VNLAG PI  R W+ + +  +
Sbjct:    68 KPADVAELC--GASVR---GIASLDELG----AQPVDAIVNLAGAPIADRPWTRKRRLLL 118

Query:   141 KESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVSF 200
              +SRI +T +++  +     G R       KP  ++  +    + W  D   +     S 
Sbjct:   119 WDSRIGLTEQLLTWL-----GTRSQ-----KPALMISGS---AVGWYGDSGEREIDETSL 165

Query:   201 ----NRGVLVCREWEGTALKVNK-DVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLG 255
                 +    +C  WE TA +     VR+ LIR G+VL    G L +++P F    GGP+G
Sbjct:   166 PAKEDFASQLCNAWEETAQRAESLGVRVVLIRTGLVLSDRAGFLQRLLPPFKFGMGGPIG 225

Query:   256 SGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPV 315
             +G+QW  W+H+DD +  I   L+    +G  N  AP+PVR  +    L  +L RP+++P+
Sbjct:   226 NGRQWMPWVHIDDQIAAIDFLLNLNEAKGPYNVCAPSPVRNRQFAKALAGILHRPAFMPM 285

Query:   316 PEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIM 362
             P  ALK +LGE + ++L GQR  P R ++ GF F Y  +  AL+ ++
Sbjct:   286 PALALKVLLGELSVLLLGGQRARPERLQKAGFTFTYTELDTALQDLL 332

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O32960	Y860_MYCLE	No assigned EC number	0.3113	0.8044	0.9511	yes	no
O31574	YFHF_BACSU	No assigned EC number	0.3156	0.8016	0.9603	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	estExt_fgenesh4_pg.C_LG_IX0405	hypothetical protein (350 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	estExt_Genewise1_v1.C_LG_IV3806	hypothetical protein (326 aa)							•		0.491
	eugene3.01270014	hypothetical protein (503 aa)	•								0.450
	gw1.2059.13.1	annotation not avaliable (156 aa)							•		0.427
	eugene3.28270001	Predicted protein (235 aa)	•								0.416
	estExt_fgenesh4_pm.C_LG_XII0400	hypothetical protein (274 aa)				•			•		0.404
	gw1.19427.3.1	hypothetical protein (361 aa)	•								0.403

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	363
TIGR01777	291	TIGR01777, yfcH, TIGR01777 family protein	1e-110
cd05242	296	cd05242, SDR_a8, atypical (a) SDRs, subgroup 8	1e-106
COG1090	297	COG1090, COG1090, Predicted nucleoside-diphosphate	2e-98
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	1e-20
pfam08338	48	pfam08338, DUF1731, Domain of unknown function (DU	9e-17
cd05271	273	cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ub	9e-13
cd05226	176	cd05226, SDR_e_a, Extended (e) and atypical (a) SD	2e-11
pfam01370	233	pfam01370, Epimerase, NAD dependent epimerase/dehy	1e-10
cd05243	203	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	1e-09
cd05266	251	cd05266, SDR_a4, atypical (a) SDRs, subgroup 4	1e-09
pfam13460	182	pfam13460, NAD_binding_10, NADH(P)-binding	1e-09
COG0702	275	COG0702, COG0702, Predicted nucleoside-diphosphate	2e-09
cd05228	318	cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr	3e-09
cd05263	293	cd05263, MupV_like_SDR_e, Pseudomonas fluorescens	4e-07
cd05232	303	cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase,	4e-07
cd05262	291	cd05262, SDR_a7, atypical (a) SDRs, subgroup 7	3e-06
cd05231	259	cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcript	3e-06
cd05232	303	cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase,	4e-06
cd05245	293	cd05245, SDR_a2, atypical (a) SDRs, subgroup 2	4e-06
cd08946	200	cd08946, SDR_e, extended (e) SDRs	5e-06
TIGR03466	328	TIGR03466, HpnA, hopanoid-associated sugar epimera	5e-06
cd05265	250	cd05265, SDR_a1, atypical (a) SDRs, subgroup 1	8e-06
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	1e-05
PLN02650	351	PLN02650, PLN02650, dihydroflavonol-4-reductase	2e-05
cd05259	282	cd05259, PCBER_SDR_a, phenylcoumaran benzylic ethe	2e-05
cd05269	272	cd05269, TMR_SDR_a, triphenylmethane reductase (TM	6e-05
cd05227	301	cd05227, AR_SDR_e, aldehyde reductase, extended (e	8e-05
cd05240	306	cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase	1e-04
cd05229	302	cd05229, SDR_a3, atypical (a) SDRs, subgroup 3	3e-04
TIGR01746	367	TIGR01746, Thioester-redct, thioester reductase do	6e-04
cd05238	305	cd05238, Gne_like_SDR_e, Escherichia coli Gne (a n	7e-04
cd05264	300	cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase	7e-04
pfam05368	232	pfam05368, NmrA, NmrA-like family	8e-04
cd05256	304	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-e	0.001
pfam07993	245	pfam07993, NAD_binding_4, Male sterility protein	0.001
cd05257	316	cd05257, Arna_like_SDR_e, Arna decarboxylase_like,	0.001
PLN02657	390	PLN02657, PLN02657, 3,8-divinyl protochlorophyllid	0.001
pfam01073	280	pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydr	0.002
cd05244	207	cd05244, BVR-B_like_SDR_a, biliverdin IX beta redu	0.003
PRK07577	234	PRK07577, PRK07577, short chain dehydrogenase; Pro	0.003
cd05266	251	cd05266, SDR_a4, atypical (a) SDRs, subgroup 4	0.004
cd05251	242	cd05251, NmrA_like_SDR_a, NmrA (a transcriptional	0.004
cd05261	248	cd05261, CAPF_like_SDR_e, capsular polysaccharide	0.004
cd05273	328	cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-	0.004
cd05254	280	cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4	0.004

>gnl|CDD|233570 TIGR01777, yfcH, TIGR01777 family protein

 Score =  324 bits (832), Expect = e-110
 Identities = 127/321 (39%), Positives = 172/321 (53%), Gaps = 45/321 (14%)

Query: 53  VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRD 112
           + +TG TGFIGR L QRL    H+V +LTRS        P                +  D
Sbjct: 1   ILITGGTGFIGRALTQRLTKRGHEVTILTRS--------PPPGANTKWEGYKPWAGEDAD 52

Query: 113 CIQGSTAVVNLAGTPIGT-RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVK 171
            ++G+ AV+NLAG PI   RW+ E K+EI++SRI  T  +V+ I  + +          K
Sbjct: 53  SLEGADAVINLAGEPIADKRWTEERKQEIRDSRIDTTRLLVEAIAAAEQ----------K 102

Query: 172 PKYLMRAA------HQEMITWL-------SDYCAKVYCLVSFNRGVLVCREWEGTALKVN 218
           PK  + A+        E   +         D+ A++            CR+WE  A    
Sbjct: 103 PKVFISASAVGYYGPSEDREYTEEDSPAGDDFLAEL------------CRDWEEAAQAAE 150

Query: 219 K-DVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEAL 277
               R+ L+R GIVLG  GGALAKM+  F +  GGPLGSG+QWFSWIH++D+V LI  AL
Sbjct: 151 DLGTRVVLLRTGIVLGPKGGALAKMLLPFRLGLGGPLGSGRQWFSWIHIEDLVQLILFAL 210

Query: 278 SNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRV 337
            N S  G +N TAP PVR  E    L   L RP++ PVP F L+A+LGE A ++L+GQRV
Sbjct: 211 ENASVSGPVNATAPEPVRNKEFAKALARALHRPAFFPVPAFVLRALLGEMAALLLKGQRV 270

Query: 338 VPARAKELGFPFKYRYVKDAL 358
           +P +  E GF F+Y  + +AL
Sbjct: 271 LPEKLLEAGFQFQYPDLDEAL 291

This model represents a clade of proteins of unknown function including the E. coli yfcH protein [Hypothetical proteins, Conserved]. Length = 291

>gnl|CDD|187553 cd05242, SDR_a8, atypical (a) SDRs, subgroup 8

 Score =  312 bits (802), Expect = e-106
 Identities = 132/330 (40%), Positives = 176/330 (53%), Gaps = 53/330 (16%)

Query: 52  TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWR 111
            + +TG TGFIGR L +RL A  H+V VL+R   KAE +              AE   W 
Sbjct: 1   KIVITGGTGFIGRALTRRLTAAGHEVVVLSRRPGKAEGL--------------AEVITWD 46

Query: 112 DC------IQGSTAVVNLAGTPI-GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRP 164
                   + G+ AV+NLAG PI   RW+   KKEI  SRI  T  +V+ I  +P    P
Sbjct: 47  GLSLGPWELPGADAVINLAGEPIACRRWTEANKKEILSSRIESTRVLVEAIANAPA--PP 104

Query: 165 SVLELVKPKYLMRAAH------QEMITWLS----DYCAKVYCLVSFNRGVLVCREWEGTA 214
            VL          A         E++T  S    D+ A+V            C+ WE  A
Sbjct: 105 KVL------ISASAVGYYGHSGDEVLTENSPSGKDFLAEV------------CKAWEKAA 146

Query: 215 LKVNK-DVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLI 273
              ++   R+ ++R G+VLG DGGAL KM+  F +  GGPLGSG+QW SWIH+DD+V LI
Sbjct: 147 QPASELGTRVVILRTGVVLGPDGGALPKMLLPFRLGLGGPLGSGRQWMSWIHIDDLVRLI 206

Query: 274 YEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEG-AFVVL 332
             A+ NP   G +N  APNPV  AE    LG  L RP+ LPVP FALK   GE  A ++L
Sbjct: 207 EFAIENPDLSGPVNAVAPNPVTNAEFTKALGRALHRPAGLPVPAFALKLGFGEMRAELLL 266

Query: 333 EGQRVVPARAKELGFPFKYRYVKDALKAIM 362
           +GQRV+P R  + GF F+Y  +++AL+ ++
Sbjct: 267 KGQRVLPERLLDAGFQFRYPDLEEALEELL 296

This subgroup contains atypical SDRs of unknown function. Proteins in this subgroup have a glycine-rich NAD(P)-binding motif consensus that resembles that of the extended SDRs, (GXXGXXG or GGXGXXG), but lacks the characteristic active site residues of the SDRs. A Cys often replaces the usual Lys of the YXXXK active site motif, while the upstream Ser is generally present and Arg replaces the usual Asn. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 296

>gnl|CDD|224015 COG1090, COG1090, Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

 Score =  293 bits (753), Expect = 2e-98
 Identities = 130/316 (41%), Positives = 176/316 (55%), Gaps = 26/316 (8%)

Query: 53  VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRD 112
           + +TG TG IGR L  RL+   HQV +LTR   KA           + G+  A       
Sbjct: 1   ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLH-PNVTLWEGLADALT----- 54

Query: 113 CIQGSTAVVNLAGTPIGT-RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVK 171
              G  AV+NLAG PI   RW+ + K+EI++SRI  T K+V+LI  S            K
Sbjct: 55  --LGIDAVINLAGEPIAERRWTEKQKEEIRQSRINTTEKLVELIAASET----------K 102

Query: 172 PKYLMRAAHQEMITWLSDYCAKVYCLVS-FNRGVL--VCREWEGTALKVNKD-VRLALIR 227
           PK L+ A+    + +      +V    S      L  +C++WE  AL+  +   R+ L+R
Sbjct: 103 PKVLISAS---AVGYYGHSGDRVVTEESPPGDDFLAQLCQDWEEEALQAQQLGTRVVLLR 159

Query: 228 IGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVIN 287
            G+VL  DGGAL KM+PLF +  GG LGSG+QWFSWIH++D+VN I   L N    G  N
Sbjct: 160 TGVVLSPDGGALGKMLPLFKLGLGGKLGSGRQWFSWIHIEDLVNAILFLLENEQLSGPFN 219

Query: 288 GTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGF 347
            TAPNPVR  E    LG  L RP+ LPVP FAL+ +LGE A ++L GQRV+P + +  GF
Sbjct: 220 LTAPNPVRNKEFAHALGRALHRPAILPVPSFALRLLLGEMADLLLGGQRVLPKKLEAAGF 279

Query: 348 PFKYRYVKDALKAIMS 363
            F+Y  +++AL  I+ 
Sbjct: 280 QFQYPDLEEALADILK 295

Length = 297

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 90.8 bits (225), Expect = 1e-20
 Identities = 62/329 (18%), Positives = 118/329 (35%), Gaps = 39/329 (11%)

Query: 51  MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 110
           M + VTG  GFIG  LV+RL A  H VR L R R   + +  G    F    +   +   
Sbjct: 1   MRILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLLSGV--EFVVLDLTDRDLVD 58

Query: 111 RDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRP------ 164
                   AV++LA        ++    E  +  +  T  +++       GV+       
Sbjct: 59  ELAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAA--RAAGVKRFVFASS 116

Query: 165 -SVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRL 223
            SV+    P   +          L+ Y       ++  + +       G        + +
Sbjct: 117 VSVVYGDPPPLPIDEDLGP-PRPLNPYGV---SKLAAEQLLRAYARLYG--------LPV 164

Query: 224 ALIRIGIVLG----KDGGALAKMIPLFMMFAGGPL----GSGQQWFSWIHLDDIVNLIYE 275
            ++R   V G     D  +      +  +  G P+    G G Q   ++++DD+ + +  
Sbjct: 165 VILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLL 224

Query: 276 ALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQ 335
           AL NP       G+    + + E+ + +   +G  + L V               + EG+
Sbjct: 225 ALENPDGGVFNIGSGTAEITVRELAEAVAEAVGSKAPLIVYI------PLGRRGDLREGK 278

Query: 336 RVVPARAK-ELGFPFKYRYVKDALKAIMS 363
            +  ++A+  LG+  K    ++ L   + 
Sbjct: 279 LLDISKARAALGWEPKVSL-EEGLADTLE 306

Length = 314

>gnl|CDD|203914 pfam08338, DUF1731, Domain of unknown function (DUF1731)

 Score = 72.9 bits (180), Expect = 9e-17
 Identities = 25/47 (53%), Positives = 35/47 (74%)

Query: 315 VPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAI 361
           VP FALK +LGE A ++LEGQRV+P +  E GF F+Y  ++DAL+ +
Sbjct: 1   VPAFALKLLLGEMAELLLEGQRVLPKKLLEAGFQFRYPTLEDALRDL 47

This domain of unknown function appears towards the C-terminus of proteins of the NAD dependent epimerase/dehydratase family (pfam01370) in bacteria, eukaryotes and archaea. Many of the proteins in which it is found are involved in cell-division inhibition. Length = 48

>gnl|CDD|187579 cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs

 Score = 67.3 bits (165), Expect = 9e-13
 Identities = 28/86 (32%), Positives = 36/86 (41%), Gaps = 8/86 (9%)

Query: 51  MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAE---- 106
           M V+V GATGFIGR +V RL     QV V  R                   V+  E    
Sbjct: 1   MVVTVFGATGFIGRYVVNRLAKRGSQVIVPYRCE---AYARRLLVMGDLGQVLFVEFDLR 57

Query: 107 -EPQWRDCIQGSTAVVNLAGTPIGTR 131
            +   R  ++GS  V+NL G    T+
Sbjct: 58  DDESIRKALEGSDVVINLVGRLYETK 83

This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 273

>gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs

 Score = 62.0 bits (151), Expect = 2e-11
 Identities = 28/107 (26%), Positives = 47/107 (43%), Gaps = 9/107 (8%)

Query: 53  VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRD 112
           + + GATGFIGR L + L    H+V +L R+  +       ++        + +     D
Sbjct: 1   ILILGATGFIGRALARELLEQGHEVTLLVRNTKRL--SKEDQEPVAVVEGDLRDLDSLSD 58

Query: 113 CIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESP 159
            +QG   V++LAG P  TR       +  E  +  T  V++   E+ 
Sbjct: 59  AVQGVDVVIHLAGAPRDTR-------DFCEVDVEGTRNVLEAAKEAG 98

Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176

>gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family

 Score = 60.8 bits (148), Expect = 1e-10
 Identities = 55/258 (21%), Positives = 91/258 (35%), Gaps = 54/258 (20%)

Query: 55  VTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKT------------RFFPGV 102
           VTG TGFIG  LV+RL  + ++V VL R R    L     +             R    V
Sbjct: 3   VTGGTGFIGSHLVRRLLQEGYEVIVLGRRRRSESLNTGRIRFHEGDLTDPDALERLLAEV 62

Query: 103 MIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGV 162
                           AV++LA    G   S E   +   + +  T ++++    +  GV
Sbjct: 63  QP-------------DAVIHLAA-QSGVGASFEDPADFIRANVLGTLRLLEAARRA--GV 106

Query: 163 RPSVLEL----VKPKYLMRAAHQEMITW-LSDY-CAKVYCLVSFNRGVLVCREWEGTALK 216
           +   +      V          ++     LS Y  AK+           +   +      
Sbjct: 107 K-RFVFASSSEVYGDVADPPITEDTPLGPLSPYAAAKLA-------AERLVEAYARA--- 155

Query: 217 VNKDVRLALIRIGIVLGKDGGAL--AKMIPLFM--MFAGGP---LGSGQQWFSWIHLDDI 269
               +R  ++R+  V G          +IP  +  +  G P   LG G Q   ++++DD+
Sbjct: 156 --YGLRAVILRLFNVYGPGNPDPFVTHVIPALIRRILEGKPILLLGDGTQRRDFLYVDDV 213

Query: 270 VNLIYEALSNPSYRGVIN 287
              I  AL +P    + N
Sbjct: 214 ARAILLALEHPDGGEIYN 231

This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233

>gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5

 Score = 57.2 bits (139), Expect = 1e-09
 Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 2/75 (2%)

Query: 52  TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWR 111
            V V GATG +GR +V+ L    +QVR L R  S+AE +           +  AE     
Sbjct: 1   KVLVVGATGKVGRHVVRELLDRGYQVRALVRDPSQAEKLEAAGAEVVVGDLTDAESLA-- 58

Query: 112 DCIQGSTAVVNLAGT 126
             ++G  AV++ AG+
Sbjct: 59  AALEGIDAVISAAGS 73

This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203

>gnl|CDD|187576 cd05266, SDR_a4, atypical (a) SDRs, subgroup 4

 Score = 57.7 bits (140), Expect = 1e-09
 Identities = 28/92 (30%), Positives = 36/92 (39%), Gaps = 11/92 (11%)

Query: 255 GSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLP 314
            +G    + IH+DD+V  +  AL  P+   V N     PV   E       +LG    LP
Sbjct: 171 PAGNAPTNRIHVDDLVGALAFALQRPAPGPVYNVVDDLPVTRGEFYQAAAELLG----LP 226

Query: 315 VPEFALKAVLGEGAFVVLEGQRVVPARAKELG 346
            P F   A L        EG+RV   R K   
Sbjct: 227 PPPFIPFAFLR-------EGKRVSNDRLKAEL 251

Atypical SDRs in this subgroup are poorly defined, one member is identified as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is related to, but is different from, the archetypical SDRs, GXGXXG. This subgroup also lacks most of the characteristic active site residues of the SDRs; however, the upstream Ser is present at the usual place, and some potential catalytic residues are present in place of the usual YXXXK active site motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 251

>gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding

 Score = 56.6 bits (137), Expect = 1e-09
 Identities = 26/73 (35%), Positives = 34/73 (46%), Gaps = 5/73 (6%)

Query: 55  VTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI 114
           V GATG  GRRLV+ L A  HQV  L+R+ SKA    P           + +     + +
Sbjct: 3   VIGATGKTGRRLVKELLARGHQVTALSRNPSKA----PAPGVTPVQKD-LFDLADLAEAL 57

Query: 115 QGSTAVVNLAGTP 127
            G  AVV+  G  
Sbjct: 58  AGVDAVVDAFGAR 70

Length = 182

>gnl|CDD|223774 COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 57.6 bits (139), Expect = 2e-09
 Identities = 59/279 (21%), Positives = 92/279 (32%), Gaps = 44/279 (15%)

Query: 51  MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 110
           M + VTGATGF+G  +V+ L A  H+VR   R+   A  +  G +        + +    
Sbjct: 1   MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALAGGVEVVL---GDLRDPKSL 57

Query: 111 RDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELV 170
               +G   V+ ++G   G+     ++              V  +  + E     V   V
Sbjct: 58  VAGAKGVDGVLLISGLLDGSDAFRAVQ--------------VTAVVRAAEAAGAGVKHGV 103

Query: 171 KPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVN-KDVRLALIRIG 229
                           LS   A      +  R      E    +  +    +R A   +G
Sbjct: 104 S---------------LSVLGADAASPSALARAKAAV-EAALRSSGIPYTTLRRAAFYLG 147

Query: 230 IVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRG-VING 288
                   A A  +P+     G          S I +DD+   +  AL  P+  G     
Sbjct: 148 AGAAFIEAAEAAGLPVIPRGIGR--------LSPIAVDDVAEALAAALDAPATAGRTYEL 199

Query: 289 TAPNPVRLAEMCDHLGNVLGRPSWL-PVPEFALKAVLGE 326
             P  + LAE+   L   +GRP  L P    AL   L  
Sbjct: 200 AGPEALTLAELASGLDYTIGRPVGLIPEALAALTLALSG 238

Length = 275

>gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs

 Score = 57.3 bits (139), Expect = 3e-09
 Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 12/76 (15%)

Query: 55  VTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAE-----EPQ 109
           VTGATGF+G  LV+ L A  ++VR L RS S A L+           V + E        
Sbjct: 3   VTGATGFLGSNLVRALLAQGYRVRALVRSGSDAVLLDG-------LPVEVVEGDLTDAAS 55

Query: 110 WRDCIQGSTAVVNLAG 125
               ++G   V +LA 
Sbjct: 56  LAAAMKGCDRVFHLAA 71

This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318

>gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs

 Score = 50.8 bits (122), Expect = 4e-07
 Identities = 20/53 (37%), Positives = 27/53 (50%)

Query: 55  VTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEE 107
           VTG TGF+GR LV+RL  +  +V VL RS S  E     ++       +   E
Sbjct: 3   VTGGTGFLGRHLVKRLLENGFKVLVLVRSESLGEAHERIEEAGLEADRVRVLE 55

This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|187543 cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs

 Score = 50.8 bits (122), Expect = 4e-07
 Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 14/77 (18%)

Query: 52  TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAE--EPQ 109
            V VTGA GFIGR LV +L +   +VR+  R+                P V++AE  +  
Sbjct: 1   KVLVTGANGFIGRALVDKLLSRGEEVRIAVRNA-----------ENAEPSVVLAELPDID 49

Query: 110 WR-DCIQGSTAVVNLAG 125
              D   G  AVV+LA 
Sbjct: 50  SFTDLFLGVDAVVHLAA 66

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 303

>gnl|CDD|187572 cd05262, SDR_a7, atypical (a) SDRs, subgroup 7

 Score = 48.1 bits (115), Expect = 3e-06
 Identities = 22/44 (50%), Positives = 26/44 (59%), Gaps = 1/44 (2%)

Query: 51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRS-RSKAELIFPG 93
          M V VTGATGFIG  +V+ L A  H+V  L RS    A+L   G
Sbjct: 1  MKVFVTGATGFIGSAVVRELVAAGHEVVGLARSDAGAAKLEAAG 44

This subgroup contains atypical SDRs of unknown function. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 291

>gnl|CDD|187542 cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcriptional regulator) and triphenylmethane reductase (TMR) like proteins, subgroup 1, atypical (a) SDRs

 Score = 47.7 bits (114), Expect = 3e-06
 Identities = 67/295 (22%), Positives = 102/295 (34%), Gaps = 76/295 (25%)

Query: 55  VTGATGFIGRRLVQRLQADNHQVRVLTRSRSK-AEL------IFPGKKTRFFPGVMIAEE 107
           VTGATG IG ++   L      VR L RS  + A L      +  G      P V+    
Sbjct: 3   VTGATGRIGSKVATTLLEAGRPVRALVRSDERAAALAARGAEVVVGDLDD--PAVL---- 56

Query: 108 PQWRDCIQGSTAV---VNLAGTPIGTRW----SSEIKKEIKESRIRVTSKVVDLINESPE 160
                 + G  AV      A T          +      ++E+ ++   +VV+L   S  
Sbjct: 57  ---AAALAGVDAVFFLAPPAPTADARPGYVQAAEAFASALREAGVK---RVVNL---SSV 107

Query: 161 GVRPSVLELVKPKYLMRAAH--QEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVN 218
           G  P       P  L+R     ++++ W          +V       +  E   +     
Sbjct: 108 GADPE-----SPSGLIRGHWLMEQVLNWAGLP------VVHLRPAWFM--ENLLSQAP-- 152

Query: 219 KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAG-GPLGSGQQWFSWIHLDDIVNLIYEAL 277
                              ++ K   L + F G G L         I  DDI  +  + L
Sbjct: 153 -------------------SIRKAGVLALPFPGDGRLP-------PIATDDIARVAAKLL 186

Query: 278 SNPSYRG--VINGTAPNPVRLAEMCDHLGNVLGRP-SWLPVPEFALKAVLGEGAF 329
            +P + G  V   T P  + + E+   L  VLGRP  ++PVPE   +A L    F
Sbjct: 187 LDPEWHGHRVYELTGPEDLTMNEIAAALSRVLGRPVRYVPVPEEQWEATLLSLGF 241

Atypical SDRs related to NMRa, TMR, and HSCARG (an NADPH sensor). This subgroup resembles the SDRs and has a partially conserved characteristic [ST]GXXGXXG NAD-binding motif, but lacks the conserved active site residues. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 259

>gnl|CDD|187543 cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs

 Score = 47.7 bits (114), Expect = 4e-06
 Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 9/106 (8%)

Query: 222 RLALIRIGIVLGKDG-GALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNP 280
            + ++R  +V G    G  A+++ L       P G+ +   S + LD++V+ IY  +S P
Sbjct: 156 EVVILRPPMVYGPGVRGNFARLMRLIDRGLPLPPGAVKNRRSLVSLDNLVDAIYLCISLP 215

Query: 281 SYRGVINGTA----PNPVRLAEMCDHLGNVLGRPSW-LPVPEFALK 321
                 NGT       PV  AE+ D +   LG+P+  LPVP   L+
Sbjct: 216 ---KAANGTFLVSDGPPVSTAELVDEIRRALGKPTRLLPVPAGLLR 258

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 303

>gnl|CDD|187556 cd05245, SDR_a2, atypical (a) SDRs, subgroup 2

 Score = 47.7 bits (114), Expect = 4e-06
 Identities = 21/34 (61%), Positives = 24/34 (70%)

Query: 53 VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK 86
          V VTGATG++G RLV RL  + HQVR L RS  K
Sbjct: 1  VLVTGATGYVGGRLVPRLLQEGHQVRALVRSPEK 34

This subgroup contains atypical SDRs, one member is identified as Escherichia coli protein ybjT, function unknown. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that generally matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs

 Score = 46.1 bits (110), Expect = 5e-06
 Identities = 15/31 (48%), Positives = 19/31 (61%)

Query: 53 VSVTGATGFIGRRLVQRLQADNHQVRVLTRS 83
          + VTG  GFIG  LV+RL    H+V V+ R 
Sbjct: 1  ILVTGGAGFIGSHLVRRLLERGHEVVVIDRL 31

Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200

>gnl|CDD|163279 TIGR03466, HpnA, hopanoid-associated sugar epimerase

 Score = 47.3 bits (113), Expect = 5e-06
 Identities = 18/38 (47%), Positives = 22/38 (57%)

Query: 51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE 88
          M V VTGATGF+G  +V+ L     +VRVL R  S   
Sbjct: 1  MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRR 38

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. This gene and its association with hopene biosynthesis in Zymomonas mobilis has been noted in the literature where the gene symbol hpnA was assigned. Hopanoids are known to be components of the plasma membrane and to have polar sugar head groups in Z. mobilis and other species. Length = 328

>gnl|CDD|187575 cd05265, SDR_a1, atypical (a) SDRs, subgroup 1

 Score = 46.5 bits (111), Expect = 8e-06
 Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 2/48 (4%)

Query: 51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRF 98
          M + + G T FIG+ LV+ L A  H V V  R R+K     P      
Sbjct: 1  MKILIIGGTRFIGKALVEELLAAGHDVTVFNRGRTKP--DLPEGVEHI 46

Atypical SDRs in this subgroup are poorly defined and have been identified putatively as isoflavones reductase, sugar dehydratase, mRNA binding protein etc. Atypical SDRs are distinct from classical SDRs. Members of this subgroup retain the canonical active site triad (though not the upstream Asn found in most SDRs) but have an unusual putative glycine-rich NAD(P)-binding motif, GGXXXXG, in the usual location. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 250

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 46.5 bits (111), Expect = 1e-05
 Identities = 21/41 (51%), Positives = 24/41 (58%), Gaps = 2/41 (4%)

Query: 51 MTVSVTGATGFIGRRLVQRL--QADNHQVRVLTRSRSKAEL 89
          M   VTG TGFIGRRLV RL  +     V VL R +S + L
Sbjct: 1  MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRL 41

Length = 657

>gnl|CDD|178256 PLN02650, PLN02650, dihydroflavonol-4-reductase

 Score = 46.0 bits (109), Expect = 2e-05
 Identities = 33/83 (39%), Positives = 42/83 (50%), Gaps = 7/83 (8%)

Query: 52  TVSVTGATGFIGRRLVQRLQADNHQVRVLTRS-----RSKAELIFPGKKTRF-FPGVMIA 105
           TV VTGA+GFIG  LV RL    + VR   R      + K  L  PG  TR       +A
Sbjct: 7   TVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLA 66

Query: 106 EEPQWRDCIQGSTAVVNLAGTPI 128
            E  + D I+G T V ++A TP+
Sbjct: 67  VEGSFDDAIRGCTGVFHVA-TPM 88

Length = 351

>gnl|CDD|187569 cd05259, PCBER_SDR_a, phenylcoumaran benzylic ether reductase (PCBER) like, atypical (a) SDRs

 Score = 45.4 bits (108), Expect = 2e-05
 Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 2/78 (2%)

Query: 52  TVSVTGATGFIGRRLVQRL-QADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 110
            +++ GATG +G  +V  L  +    V VLTR  S +   F     +  P V  A     
Sbjct: 1   KIAIAGATGTLGGPIVSALLASPGFTVTVLTRPSSTSSNEFQPSGVKVVP-VDYASHESL 59

Query: 111 RDCIQGSTAVVNLAGTPI 128
              ++G  AV++  G   
Sbjct: 60  VAALKGVDAVISALGGAA 77

PCBER and pinoresinol-lariciresinol reductases are NADPH-dependent aromatic alcohol reductases, and are atypical members of the SDR family. Other proteins in this subgroup are identified as eugenol synthase. These proteins contain an N-terminus characteristic of NAD(P)-binding proteins and a small C-terminal domain presumed to be involved in substrate binding, but they do not have the conserved active site Tyr residue typically found in SDRs. Numerous other members have unknown functions. The glycine rich NADP-binding motif in this subgroup is of 2 forms: GXGXXG and G[GA]XGXXG; it tends to be atypical compared with the forms generally seen in classical or extended SDRs. The usual SDR active site tetrad is not present, but a critical active site Lys at the usual SDR position has been identified in various members, though other charged and polar residues are found at this position in this subgroup. Atypical SDR-related proteins retain the Rossmann fold of the SDRs, but have limited sequence identity and generally lack the catalytic properties of the archetypical members. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 282

>gnl|CDD|187578 cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs

 Score = 43.8 bits (104), Expect = 6e-05
 Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 7/48 (14%)

Query: 55  VTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGV 102
           VTGATG +G  +V+ L A    V  L R+  KA       K     GV
Sbjct: 3   VTGATGKLGTAVVELLLAKVASVVALVRNPEKA-------KAFAADGV 43

TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 272

>gnl|CDD|187538 cd05227, AR_SDR_e, aldehyde reductase, extended (e) SDRs

 Score = 43.4 bits (103), Expect = 8e-05
 Identities = 17/37 (45%), Positives = 23/37 (62%)

Query: 52 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE 88
           V VTGATGFI   +V++L    ++VR   RS SK+ 
Sbjct: 1  LVLVTGATGFIASHIVEQLLKAGYKVRGTVRSLSKSA 37

This subgroup contains aldehyde reductase of the extended SDR-type and related proteins. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 301

>gnl|CDD|187551 cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase (G4E), subgroup 3, extended (e) SDRs

 Score = 43.1 bits (102), Expect = 1e-04
 Identities = 62/314 (19%), Positives = 110/314 (35%), Gaps = 34/314 (10%)

Query: 53  VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRD 112
           + VTGA G +GR L +RL A    + V    R +     P  K  +    +         
Sbjct: 1   ILVTGAAGGLGRLLARRLAASPRVIGVDGLDRRRPPGSPP--KVEYVRLDIRDPAAADVF 58

Query: 113 CIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRV--TSKVVDLINESPEGVRPSVLELV 170
             + + AVV+LA            +   +  RI V  T  V+D    +  GV   V   V
Sbjct: 59  REREADAVVHLA------FILDPPRDGAERHRINVDGTQNVLDACAAA--GVPRVV---V 107

Query: 171 KPKYLMRAAHQEMITWLS-DYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIG 229
                +  AH +    L+ D   +     +++R      +      + + ++ + ++R  
Sbjct: 108 TSSVAVYGAHPDNPAPLTEDAPLRGSPEFAYSRDKAEVEQLLAEFRRRHPELNVTVLRPA 167

Query: 230 IVLGKDGGAL--AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVIN 287
            +LG          + P  +   GG        F ++H DD+   +  A+   +  G+ N
Sbjct: 168 TILGPGTRNTTRDFLSPRRLPVPGGFDPP----FQFLHEDDVARALVLAVRAGA-TGIFN 222

Query: 288 GTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVL--------GEGAFVVLEGQRVVP 339
                PV L+ +   LG    RP  LP P  A  A                 L+   V+ 
Sbjct: 223 VAGDGPVPLSLVLALLG---RRPVPLPSPLPAALAAARRLGLRPLPPEQLDFLQYPPVMD 279

Query: 340 ARAKELGFPFKYRY 353
                +   ++ ++
Sbjct: 280 TTRARVELGWQPKH 293

Members of this bacterial subgroup are identified as possible sugar epimerases, such as UDP-glucose 4 epimerase. However, while the NAD(P)-binding motif is fairly well conserved, not all members retain the canonical active site tetrad of the extended SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 306

>gnl|CDD|187540 cd05229, SDR_a3, atypical (a) SDRs, subgroup 3

 Score = 41.5 bits (98), Expect = 3e-04
 Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 5/82 (6%)

Query: 52  TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWR 111
           T  V GA+G IGR + + L+     VR+++RS SK                M A      
Sbjct: 1   TAHVLGASGPIGREVARELRRRGWDVRLVSRSGSKLAW--LPGVEIVAADAMDAS--SVI 56

Query: 112 DCIQGSTAVVNLAGTPIGTRWS 133
              +G+  + + A  P  TRW 
Sbjct: 57  AAARGADVIYHCAN-PAYTRWE 77

These atypical SDR family members of unknown function have a glycine-rich NAD(P)-binding motif consensus that is very similar to the extended SDRs, GXXGXXG. Generally, this group has poor conservation of the active site tetrad, However, individual sequences do contain matches to the YXXXK active site motif, and generally Tyr or Asn in place of the upstream Ser found in most SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 302

>gnl|CDD|233557 TIGR01746, Thioester-redct, thioester reductase domain

 Score = 41.2 bits (97), Expect = 6e-04
 Identities = 15/37 (40%), Positives = 24/37 (64%)

Query: 52 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE 88
          TV +TGATGF+G  L++ L   + Q +V+   R+ +E
Sbjct: 1  TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASE 37

This model includes the terminal domain from the fungal alpha aminoadipate reductase enzyme (also known as aminoadipate semialdehyde dehydrogenase) which is involved in the biosynthesis of lysine , as well as the reductase-containing component of the myxochelin biosynthetic gene cluster, MxcG. The mechanism of reduction involves activation of the substrate by adenylation and transfer to a covalently-linked pantetheine cofactor as a thioester. This thioester is then reduced to give an aldehyde (thus releasing the product) and a regenerated pantetheine thiol. (In myxochelin biosynthesis this aldehyde is further reduced to an alcohol or converted to an amine by an aminotransferase.) This is a fundamentally different reaction than beta-ketoreductase domains of polyketide synthases which act at a carbonyl two carbons removed from the thioester and forms an alcohol as a product. This domain is invariably found at the C-terminus of the proteins which contain it (presumably because it results in the release of the product). The majority of hits to this model are non-ribosomal peptide synthetases in which this domain is similarly located proximal to a thiolation domain (pfam00550). In some cases this domain is found at the end of a polyketide synthetase enzyme, but is unlike ketoreductase domains which are found before the thiolase domains. Exceptions to this observed relationship with the thiolase domain include three proteins which consist of stand-alone reductase domains (GP|466833 from M. leprae, GP|435954 from Anabaena and OMNI|NTL02SC1199 from Strep. coelicolor) and one protein (OMNI|NTL01NS2636 from Nostoc) which contains N-terminal homology with a small group of hypothetical proteins but no evidence of a thiolation domain next to the putative reductase domain. Below the noise cutoff to this model are proteins containing more distantly related ketoreductase and dehydratase/epimerase domains. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. Length = 367

>gnl|CDD|187549 cd05238, Gne_like_SDR_e, Escherichia coli Gne (a nucleoside-diphosphate-sugar 4-epimerase)-like, extended (e) SDRs

 Score = 40.8 bits (96), Expect = 7e-04
 Identities = 14/30 (46%), Positives = 22/30 (73%)

Query: 51 MTVSVTGATGFIGRRLVQRLQADNHQVRVL 80
          M V +TGA+GF+G+RL +RL +D    R++
Sbjct: 1  MKVLITGASGFVGQRLAERLLSDVPNERLI 30

Nucleoside-diphosphate-sugar 4-epimerase has the characteristic active site tetrad and NAD-binding motif of the extended SDR, and is related to more specifically defined epimerases such as UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), which catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup includes Escherichia coli 055:H7 Gne, a UDP-GlcNAc 4-epimerase, essential for O55 antigen synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|187574 cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase (G4E), subgroup 5, extended (e) SDRs

 Score = 40.8 bits (96), Expect = 7e-04
 Identities = 17/51 (33%), Positives = 20/51 (39%), Gaps = 2/51 (3%)

Query: 53  VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVM 103
           V + G  GFIG  LV  L  +  QVRV    RS      P     +  G  
Sbjct: 2   VLIVGGNGFIGSHLVDALLEEGPQVRVF--DRSIPPYELPLGGVDYIKGDY 50

This subgroup partially conserves the characteristic active site tetrad and NAD-binding motif of the extended SDRs, and has been identified as possible UDP-glucose 4-epimerase (aka UDP-galactose 4-epimerase), a homodimeric member of the extended SDR family. UDP-glucose 4-epimerase catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|191263 pfam05368, NmrA, NmrA-like family

 Score = 39.9 bits (94), Expect = 8e-04
 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)

Query: 53 VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI 90
          + V GATG+ G  +V+      H VR L R   K+EL 
Sbjct: 1  ILVFGATGYQGGSVVRASLKAGHPVRALVRD-PKSELA 37

NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families. Length = 232

>gnl|CDD|187566 cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs

 Score = 40.3 bits (95), Expect = 0.001
 Identities = 15/26 (57%), Positives = 17/26 (65%)

Query: 55 VTGATGFIGRRLVQRLQADNHQVRVL 80
          VTG  GFIG  LV+RL    H+V VL
Sbjct: 4  VTGGAGFIGSHLVERLLERGHEVIVL 29

This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 304

>gnl|CDD|219687 pfam07993, NAD_binding_4, Male sterility protein

 Score = 39.9 bits (94), Expect = 0.001
 Identities = 11/36 (30%), Positives = 21/36 (58%), Gaps = 2/36 (5%)

Query: 55 VTGATGFIGRRLVQRL--QADNHQVRVLTRSRSKAE 88
          +TGATGF+G+ L+++L       ++  L R++    
Sbjct: 1  LTGATGFLGKVLLEKLLRSTPEVKIYCLVRAKDGES 36

This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 245

>gnl|CDD|187567 cd05257, Arna_like_SDR_e, Arna decarboxylase_like, extended (e) SDRs

 Score = 40.0 bits (94), Expect = 0.001
 Identities = 26/78 (33%), Positives = 32/78 (41%), Gaps = 7/78 (8%)

Query: 52  TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE---LIFPGKKT-RFFPG-VMIAE 106
            V VTGA GFIG  L +RL  + H+VR L    S      L         F  G V  A 
Sbjct: 1   NVLVTGADGFIGSHLTERLLREGHEVRALDIYNSFNSWGLLDNAVHDRFHFISGDVRDAS 60

Query: 107 EPQWRDCIQGSTAVVNLA 124
           E      ++    V +LA
Sbjct: 61  E--VEYLVKKCDVVFHLA 76

Decarboxylase domain of ArnA. ArnA, is an enzyme involved in the modification of outer membrane protein lipid A of gram-negative bacteria. It is a bifunctional enzyme that catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid and N-10-formyltetrahydrofolate-dependent formylation of UDP-4-amino-4-deoxy-l-arabinose; its NAD-dependent decaboxylating activity is in the C-terminal 360 residues. This subgroup belongs to the extended SDR family, however the NAD binding motif is not a perfect match and the upstream Asn of the canonical active site tetrad is not conserved. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316

>gnl|CDD|178263 PLN02657, PLN02657, 3,8-divinyl protochlorophyllide a 8-vinyl reductase

 Score = 40.1 bits (94), Expect = 0.001
 Identities = 24/98 (24%), Positives = 39/98 (39%), Gaps = 9/98 (9%)

Query: 9   STLTWSQSISPCLHSSAKPFSRCEAKKFRVFCTSDHTQKASQMTVSVTGATGFIGRRLVQ 68
            +   + S+   L   A   SR           S  +++   +TV V GATG+IG+ +V+
Sbjct: 19  PSNRLAASLGGALVRRAAAASRGSRATAAAAAQSFRSKEPKDVTVLVVGATGYIGKFVVR 78

Query: 69  RLQADNHQVRVLTRSRSKAELIFPGKKT-----RFFPG 101
            L    + V  + R +S       GK       +  PG
Sbjct: 79  ELVRRGYNVVAVAREKSGIR----GKNGKEDTKKELPG 112

Length = 390

>gnl|CDD|216283 pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydrogenase/isomerase family

 Score = 39.6 bits (93), Expect = 0.002
 Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 3/74 (4%)

Query: 55  VTGATGFIGRRLVQRL-QADNHQ-VRVLTRS-RSKAELIFPGKKTRFFPGVMIAEEPQWR 111
           VTG  GF+GR +V+ L +    Q VRV       +    F   +   +    + ++   R
Sbjct: 2   VTGGGGFLGRHIVRLLLREGELQEVRVFDLRFSPELLEDFSKLQVITYIEGDVTDKQDLR 61

Query: 112 DCIQGSTAVVNLAG 125
             +QGS  V++ A 
Sbjct: 62  RALQGSDVVIHTAA 75

The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyzes the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. Length = 280

>gnl|CDD|187555 cd05244, BVR-B_like_SDR_a, biliverdin IX beta reductase (BVR-B, aka flavin reductase)-like proteins; atypical (a) SDRs

 Score = 38.4 bits (90), Expect = 0.003
 Identities = 34/143 (23%), Positives = 53/143 (37%), Gaps = 21/143 (14%)

Query: 55  VTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI 114
           + GATG  G  +V+   A  H+V  L R  +K        K +   G ++  E   ++ +
Sbjct: 4   IIGATGRTGSAIVREALARGHEVTALVRDPAKLPAEHE--KLKVVQGDVLDLE-DVKEAL 60

Query: 115 QGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTS-----KVVDLI-------NESPEGV 162
           +G  AV++     +GTR          E    + S      V  LI        +    V
Sbjct: 61  EGQDAVISA----LGTRNDLSPTTLHSEGTRNIVSAMKAAGVKRLIVVGGAGSLDDRPKV 116

Query: 163 RPSVLELVKPKYLMRAA--HQEM 183
              +  L+ P  L R A  H  M
Sbjct: 117 TLVLDTLLFPPALRRVAEDHARM 139

Human BVR-B catalyzes pyridine nucleotide-dependent production of bilirubin-IX beta during fetal development; in the adult BVR-B has flavin and ferric reductase activities. Human BVR-B catalyzes the reduction of FMN, FAD, and riboflavin. Recognition of flavin occurs mostly by hydrophobic interactions, accounting for the broad substrate specificity. Atypical SDRs are distinct from classical SDRs. BVR-B does not share the key catalytic triad, or conserved tyrosine typical of SDRs. The glycine-rich NADP-binding motif of BVR-B is GXXGXXG, which is similar but not identical to the pattern seen in extended SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 207

>gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional

 Score = 38.2 bits (89), Expect = 0.003
 Identities = 20/43 (46%), Positives = 22/43 (51%), Gaps = 3/43 (6%)

Query: 52 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK 94
          TV VTGAT  IG  L  RL    HQV  + RS       FPG+
Sbjct: 5  TVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD---FPGE 44

Length = 234

>gnl|CDD|187576 cd05266, SDR_a4, atypical (a) SDRs, subgroup 4

 Score = 38.1 bits (89), Expect = 0.004
 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)

Query: 53 VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP 92
          V + G  G++G+RL ++L A   QV   TRS  K     P
Sbjct: 1  VLILGC-GYLGQRLARQLLAQGWQVTGTTRSPEKLAADRP 39

Atypical SDRs in this subgroup are poorly defined, one member is identified as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is related to, but is different from, the archetypical SDRs, GXGXXG. This subgroup also lacks most of the characteristic active site residues of the SDRs; however, the upstream Ser is present at the usual place, and some potential catalytic residues are present in place of the usual YXXXK active site motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 251

>gnl|CDD|187561 cd05251, NmrA_like_SDR_a, NmrA (a transcriptional regulator) and HSCARG (an NADPH sensor) like proteins, atypical (a) SDRs

 Score = 38.0 bits (89), Expect = 0.004
 Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 6/55 (10%)

Query: 53  VSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAE 106
           + V GATG  G  +V+ L  D   +VR LTR  S      P  K    PGV + +
Sbjct: 1   ILVFGATGKQGGSVVRALLKDPGFKVRALTRDPSS-----PAAKALAAPGVEVVQ 50

NmrA and HSCARG like proteins. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 242

>gnl|CDD|187571 cd05261, CAPF_like_SDR_e, capsular polysaccharide assembling protein (CAPF) like, extended (e) SDRs

 Score = 38.1 bits (89), Expect = 0.004
 Identities = 24/105 (22%), Positives = 44/105 (41%), Gaps = 25/105 (23%)

Query: 51  MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 110
           M + +TGA GFIG+ L+ RL+       +    R                    ++E + 
Sbjct: 1   MKILITGAKGFIGKNLIARLKEQKD-DDIFFYDRE-------------------SDESEL 40

Query: 111 RDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLI 155
            D +QG+  + +LAG     R   E   E +   + +T +++D +
Sbjct: 41  DDFLQGADFIFHLAGV---NRPKDE--AEFESGNVGLTERLLDAL 80

This subgroup of extended SDRs, includes some members which have been identified as capsular polysaccharide assembling proteins, such as Staphylococcus aureus Cap5F which is involved in the biosynthesis of N-acetyl-l-fucosamine, a constituent of surface polysaccharide structures of S. aureus. This subgroup has the characteristic active site tetrad and NAD-binding motif of extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 248

>gnl|CDD|187581 cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME)-like, extended (e) SDRs

 Score = 38.2 bits (89), Expect = 0.004
 Identities = 15/28 (53%), Positives = 18/28 (64%)

Query: 52 TVSVTGATGFIGRRLVQRLQADNHQVRV 79
             VTGA GFIG  L +RL+A+ H VR 
Sbjct: 2  RALVTGAGGFIGSHLAERLKAEGHYVRG 29

This subgroup of NDP-sugar epimerase/dehydratases are extended SDRs; they have the characteristic active site tetrad, and an NAD-binding motif: TGXXGXX[AG], which is a close match to the canonical NAD-binding motif. Members include Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME) which catalyzes the epimerization of two positions of GDP-alpha-D-mannose to form GDP-beta-L-galactose. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 328

>gnl|CDD|187564 cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4-hexulose reductase and related proteins, extended (e) SDRs

 Score = 38.0 bits (89), Expect = 0.004
 Identities = 14/36 (38%), Positives = 22/36 (61%)

Query: 55 VTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI 90
          +TGATG +GR LV+ L+   ++V    RSR+    +
Sbjct: 4  ITGATGMLGRALVRLLKERGYEVIGTGRSRASLFKL 39

dTDP-6-deoxy-L-lyxo-4-hexulose reductase, an extended SDR, synthesizes dTDP-L-rhamnose from alpha-D-glucose-1-phosphate, providing the precursor of L-rhamnose, an essential cell wall component of many pathogenic bacteria. This subgroup has the characteristic active site tetrad and NADP-binding motif. This subgroup also contains human MAT2B, the regulatory subunit of methionine adenosyltransferase (MAT); MAT catalyzes S-adenosylmethionine synthesis. The human gene encoding MAT2B encodes two major splicing variants which are induced in human cell liver cancer and regulate HuR, an mRNA-binding protein which stabilizes the mRNA of several cyclins, to affect cell proliferation. Both MAT2B variants include this extended SDR domain. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 280

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	363
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	100.0
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	100.0
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	100.0
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	100.0
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	100.0
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	100.0
PLN02166	436	dTDP-glucose 4,6-dehydratase	100.0
PLN02214	342	cinnamoyl-CoA reductase	100.0
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	100.0
PLN02427	386	UDP-apiose/xylose synthase	100.0
PLN02572	442	UDP-sulfoquinovose synthase	100.0
PLN02206	442	UDP-glucuronate decarboxylase	100.0
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	100.0
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	100.0
PLN02695	370	GDP-D-mannose-3',5'-epimerase	100.0
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	100.0
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	100.0
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	100.0
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	100.0
PLN02650	351	dihydroflavonol-4-reductase	100.0
PLN00198	338	anthocyanidin reductase; Provisional	100.0
PLN02653	340	GDP-mannose 4,6-dehydratase	100.0
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	100.0
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	100.0
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	100.0
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	100.0
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	100.0
PLN02260	668	probable rhamnose biosynthetic enzyme	100.0
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	100.0
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	100.0
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	100.0
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	100.0
PLN02896	353	cinnamyl-alcohol dehydrogenase	100.0
PLN02240	352	UDP-glucose 4-epimerase	100.0
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	100.0
PRK10675	338	UDP-galactose-4-epimerase; Provisional	100.0
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	100.0
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	100.0
PLN00016	378	RNA-binding protein; Provisional	100.0
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	100.0
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	100.0
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	100.0
PLN02686	367	cinnamoyl-CoA reductase	100.0
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	100.0
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.98
PLN02583	297	cinnamoyl-CoA reductase	99.98
CHL00194	317	ycf39 Ycf39; Provisional	99.98
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.97
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.97
PRK05865	854	hypothetical protein; Provisional	99.97
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.97
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	99.97
KOG3019	315	consensus Predicted nucleoside-diphosphate sugar e	99.96
PLN02778	298	3,5-epimerase/4-reductase	99.96
PRK07201	657	short chain dehydrogenase; Provisional	99.96
PLN02996	491	fatty acyl-CoA reductase	99.96
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.95
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.95
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.95
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.94
PLN02260	668	probable rhamnose biosynthetic enzyme	99.93
PRK12320	699	hypothetical protein; Provisional	99.93
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.92
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.91
PLN02503	605	fatty acyl-CoA reductase 2	99.9
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.9
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.9
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	99.89
PRK06482	276	short chain dehydrogenase; Provisional	99.88
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.88
PLN03209	576	translocon at the inner envelope of chloroplast su	99.87
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.87
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.87
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	99.85
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.84
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.84
PRK07067	257	sorbitol dehydrogenase; Provisional	99.84
PRK08263	275	short chain dehydrogenase; Provisional	99.84
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.83
PRK09135	249	pteridine reductase; Provisional	99.83
PRK06180	277	short chain dehydrogenase; Provisional	99.83
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.82
PRK05875	276	short chain dehydrogenase; Provisional	99.82
PRK06914	280	short chain dehydrogenase; Provisional	99.82
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.82
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.82
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.81
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.81
PRK07775	274	short chain dehydrogenase; Provisional	99.81
PRK07074	257	short chain dehydrogenase; Provisional	99.81
PRK05876	275	short chain dehydrogenase; Provisional	99.8
PRK06182	273	short chain dehydrogenase; Validated	99.8
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.8
PRK12829	264	short chain dehydrogenase; Provisional	99.8
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.8
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.79
PRK07774	250	short chain dehydrogenase; Provisional	99.79
PRK06128	300	oxidoreductase; Provisional	99.79
PRK08219	227	short chain dehydrogenase; Provisional	99.79
PRK07806	248	short chain dehydrogenase; Provisional	99.79
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.79
PRK12746	254	short chain dehydrogenase; Provisional	99.79
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.78
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.78
PRK06179	270	short chain dehydrogenase; Provisional	99.78
PRK06194	287	hypothetical protein; Provisional	99.78
PLN02253	280	xanthoxin dehydrogenase	99.78
PRK07060	245	short chain dehydrogenase; Provisional	99.78
PRK12828	239	short chain dehydrogenase; Provisional	99.78
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.78
PRK05993	277	short chain dehydrogenase; Provisional	99.77
PRK06841	255	short chain dehydrogenase; Provisional	99.77
PRK12827	249	short chain dehydrogenase; Provisional	99.77
PRK06101	240	short chain dehydrogenase; Provisional	99.77
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.77
PRK07890	258	short chain dehydrogenase; Provisional	99.77
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.77
PRK06138	252	short chain dehydrogenase; Provisional	99.77
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.77
PRK07577	234	short chain dehydrogenase; Provisional	99.77
PRK09134	258	short chain dehydrogenase; Provisional	99.77
PRK05717	255	oxidoreductase; Validated	99.76
PRK09186	256	flagellin modification protein A; Provisional	99.76
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.76
PRK07825	273	short chain dehydrogenase; Provisional	99.76
PRK08628	258	short chain dehydrogenase; Provisional	99.76
PRK07024	257	short chain dehydrogenase; Provisional	99.76
PRK06196	315	oxidoreductase; Provisional	99.76
PRK06500	249	short chain dehydrogenase; Provisional	99.76
PRK12939	250	short chain dehydrogenase; Provisional	99.75
PRK06701	290	short chain dehydrogenase; Provisional	99.75
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.75
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.75
PRK07856	252	short chain dehydrogenase; Provisional	99.75
PRK07985	294	oxidoreductase; Provisional	99.74
PRK06523	260	short chain dehydrogenase; Provisional	99.74
PRK06114	254	short chain dehydrogenase; Provisional	99.74
PRK08643	256	acetoin reductase; Validated	99.74
PRK07326	237	short chain dehydrogenase; Provisional	99.74
PRK06398	258	aldose dehydrogenase; Validated	99.74
KOG2774	366	consensus NAD dependent epimerase [General functio	99.74
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.74
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.74
PRK10538	248	malonic semialdehyde reductase; Provisional	99.74
PRK08265	261	short chain dehydrogenase; Provisional	99.74
PRK08324	681	short chain dehydrogenase; Validated	99.74
PRK05650	270	short chain dehydrogenase; Provisional	99.74
PRK06123	248	short chain dehydrogenase; Provisional	99.74
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.73
PRK12937	245	short chain dehydrogenase; Provisional	99.73
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.73
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.73
PRK06181	263	short chain dehydrogenase; Provisional	99.73
PRK05693	274	short chain dehydrogenase; Provisional	99.73
PRK06057	255	short chain dehydrogenase; Provisional	99.73
PRK09291	257	short chain dehydrogenase; Provisional	99.73
PRK08267	260	short chain dehydrogenase; Provisional	99.73
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.73
PRK07454	241	short chain dehydrogenase; Provisional	99.73
PRK07478	254	short chain dehydrogenase; Provisional	99.72
PRK12747	252	short chain dehydrogenase; Provisional	99.72
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.72
PRK12743	256	oxidoreductase; Provisional	99.72
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.72
PRK07814	263	short chain dehydrogenase; Provisional	99.72
COG2910	211	Putative NADH-flavin reductase [General function p	99.72
PRK07109	334	short chain dehydrogenase; Provisional	99.72
PRK08339	263	short chain dehydrogenase; Provisional	99.72
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.72
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.72
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.72
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	99.72
PRK07035	252	short chain dehydrogenase; Provisional	99.72
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.71
PRK07063	260	short chain dehydrogenase; Provisional	99.71
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.71
PRK07102	243	short chain dehydrogenase; Provisional	99.71
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.71
PRK09242	257	tropinone reductase; Provisional	99.71
PRK12744	257	short chain dehydrogenase; Provisional	99.71
PRK12742	237	oxidoreductase; Provisional	99.71
PRK06139	330	short chain dehydrogenase; Provisional	99.71
PRK07904	253	short chain dehydrogenase; Provisional	99.71
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	99.7
PRK05866	293	short chain dehydrogenase; Provisional	99.7
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.7
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.7
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.7
PRK08589	272	short chain dehydrogenase; Validated	99.7
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.7
PRK08251	248	short chain dehydrogenase; Provisional	99.69
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.69
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.69
PRK08017	256	oxidoreductase; Provisional	99.69
PRK06483	236	dihydromonapterin reductase; Provisional	99.69
PRK05867	253	short chain dehydrogenase; Provisional	99.69
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.69
PRK07069	251	short chain dehydrogenase; Validated	99.69
PRK07576	264	short chain dehydrogenase; Provisional	99.69
PRK08264	238	short chain dehydrogenase; Validated	99.69
PRK07041	230	short chain dehydrogenase; Provisional	99.68
PRK07578	199	short chain dehydrogenase; Provisional	99.68
PRK05872	296	short chain dehydrogenase; Provisional	99.68
PRK06172	253	short chain dehydrogenase; Provisional	99.68
PRK06484	520	short chain dehydrogenase; Validated	99.68
PRK06949	258	short chain dehydrogenase; Provisional	99.68
PRK06197	306	short chain dehydrogenase; Provisional	99.68
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.68
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.67
PRK07062	265	short chain dehydrogenase; Provisional	99.67
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.67
PRK09072	263	short chain dehydrogenase; Provisional	99.67
PRK06198	260	short chain dehydrogenase; Provisional	99.67
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.67
PRK07677	252	short chain dehydrogenase; Provisional	99.67
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.67
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.67
PRK05884	223	short chain dehydrogenase; Provisional	99.67
PRK12367	245	short chain dehydrogenase; Provisional	99.67
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.66
PRK08226	263	short chain dehydrogenase; Provisional	99.66
PRK06953	222	short chain dehydrogenase; Provisional	99.66
PRK08278	273	short chain dehydrogenase; Provisional	99.66
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.66
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.66
PRK07832	272	short chain dehydrogenase; Provisional	99.66
PRK08703	239	short chain dehydrogenase; Provisional	99.65
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.65
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.65
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.65
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.65
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.65
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.64
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.64
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.64
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.64
PRK07831	262	short chain dehydrogenase; Provisional	99.64
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.64
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.63
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	99.63
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.63
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.62
PRK05854	313	short chain dehydrogenase; Provisional	99.62
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.62
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.62
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.62
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.62
PRK06924	251	short chain dehydrogenase; Provisional	99.62
PRK07791	286	short chain dehydrogenase; Provisional	99.61
PRK07023	243	short chain dehydrogenase; Provisional	99.61
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.6
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.6
PRK08177	225	short chain dehydrogenase; Provisional	99.6
PRK06125	259	short chain dehydrogenase; Provisional	99.6
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	99.59
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.59
PLN02780	320	ketoreductase/ oxidoreductase	99.59
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	99.58
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.58
PRK06940	275	short chain dehydrogenase; Provisional	99.58
PRK07201	657	short chain dehydrogenase; Provisional	99.57
PRK05855	582	short chain dehydrogenase; Validated	99.57
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.56
PRK05599	246	hypothetical protein; Provisional	99.56
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.55
PRK06484	520	short chain dehydrogenase; Validated	99.55
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	99.54
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.53
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.5
PRK08303	305	short chain dehydrogenase; Provisional	99.48
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.47
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	99.47
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	99.47
KOG4288	283	consensus Predicted oxidoreductase [General functi	99.47
KOG0725	270	consensus Reductases with broad range of substrate	99.46
PRK08862	227	short chain dehydrogenase; Provisional	99.44
PLN00015	308	protochlorophyllide reductase	99.44
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.42
KOG1208	314	consensus Dehydrogenases with different specificit	99.41
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.4
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	99.4
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	99.38
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	99.34
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.33
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.33
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.31
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	99.3
COG1028	251	FabG Dehydrogenases with different specificities (	99.28
KOG1611	249	consensus Predicted short chain-type dehydrogenase	99.27
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	99.27
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.22
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.12
PTZ00325	321	malate dehydrogenase; Provisional	99.08
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.01
PLN00106	323	malate dehydrogenase	98.95
PRK06720	169	hypothetical protein; Provisional	98.91
PRK08309	177	short chain dehydrogenase; Provisional	98.9
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	98.88
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	98.72
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.72
PRK05086	312	malate dehydrogenase; Provisional	98.64
PRK09620	229	hypothetical protein; Provisional	98.58
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.53
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	98.53
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	98.48
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	98.46
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	98.42
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	98.39
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	98.37
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	98.32
PRK14982	340	acyl-ACP reductase; Provisional	98.27
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.24
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.22
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	98.17
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	98.14
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.14
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	98.11
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	98.04
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	97.98
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	97.97
PRK05671	336	aspartate-semialdehyde dehydrogenase; Reviewed	97.97
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	97.95
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	97.95
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.94
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	97.94
PRK05442	326	malate dehydrogenase; Provisional	97.92
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	97.91
COG3268	382	Uncharacterized conserved protein [Function unknow	97.87
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.87
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	97.85
PF08338	48	DUF1731: Domain of unknown function (DUF1731); Int	97.83
KOG2733	423	consensus Uncharacterized membrane protein [Functi	97.83
COG0569	225	TrkA K+ transport systems, NAD-binding component [	97.82
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	97.8
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	97.8
PRK06223	307	malate dehydrogenase; Reviewed	97.79
KOG1494	345	consensus NAD-dependent malate dehydrogenase [Ener	97.77
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	97.75
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	97.73
PRK00048	257	dihydrodipicolinate reductase; Provisional	97.72
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	97.68
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	97.68
PLN02602	350	lactate dehydrogenase	97.66
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	97.65
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	97.63
PRK12548	289	shikimate 5-dehydrogenase; Provisional	97.61
PTZ00117	319	malate dehydrogenase; Provisional	97.6
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	97.57
PF03721	185	UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen	97.56
TIGR01763	305	MalateDH_bact malate dehydrogenase, NAD-dependent.	97.56
PTZ00082	321	L-lactate dehydrogenase; Provisional	97.53
PLN00112	444	malate dehydrogenase (NADP); Provisional	97.51
PRK08664	349	aspartate-semialdehyde dehydrogenase; Reviewed	97.5
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.49
PLN02383	344	aspartate semialdehyde dehydrogenase	97.46
TIGR01296	339	asd_B aspartate-semialdehyde dehydrogenase (peptid	97.36
TIGR03026	411	NDP-sugDHase nucleotide sugar dehydrogenase. All o	97.36
COG1004	414	Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en	97.34
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	97.33
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	97.32
PRK08655	437	prephenate dehydrogenase; Provisional	97.29
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	97.27
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	97.26
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	97.25
PRK08040	336	putative semialdehyde dehydrogenase; Provisional	97.24
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	97.23
PLN02353	473	probable UDP-glucose 6-dehydrogenase	97.23
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	97.22
cd05295	452	MDH_like Malate dehydrogenase-like. These MDH-like	97.21
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.18
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	97.17
PRK09496	453	trkA potassium transporter peripheral membrane com	97.15
COG0289	266	DapB Dihydrodipicolinate reductase [Amino acid tra	97.12
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.12
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.12
PRK08306	296	dipicolinate synthase subunit A; Reviewed	97.11
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.1
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.08
PRK07531	495	bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe	97.07
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	97.07
PRK14619	308	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	97.06
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	97.05
PRK13940	414	glutamyl-tRNA reductase; Provisional	97.03
PRK15057	388	UDP-glucose 6-dehydrogenase; Provisional	97.03
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	97.03
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	97.01
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	96.99
cd01339	300	LDH-like_MDH L-lactate dehydrogenase-like malate d	96.98
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.97
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.97
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	96.97
TIGR00978	341	asd_EA aspartate-semialdehyde dehydrogenase (non-p	96.97
PRK06598	369	aspartate-semialdehyde dehydrogenase; Reviewed	96.95
PRK06728	347	aspartate-semialdehyde dehydrogenase; Provisional	96.93
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	96.93
smart00859	122	Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin	96.92
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	96.92
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	96.91
PRK11863	313	N-acetyl-gamma-glutamyl-phosphate reductase; Provi	96.91
PRK08293	287	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.88
PRK09496	453	trkA potassium transporter peripheral membrane com	96.88
TIGR00872	298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	96.86
TIGR00036	266	dapB dihydrodipicolinate reductase.	96.84
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.83
PF13950	62	Epimerase_Csub: UDP-glucose 4-epimerase C-term sub	96.83
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	96.82
PRK06130	311	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.81
PRK06019	372	phosphoribosylaminoimidazole carboxylase ATPase su	96.81
PRK00094	325	gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr	96.79
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.77
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.74
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.73
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	96.72
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	96.72
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	96.71
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	96.71
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.67
PRK11559	296	garR tartronate semialdehyde reductase; Provisiona	96.67
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	96.66
COG0240	329	GpsA Glycerol-3-phosphate dehydrogenase [Energy pr	96.66
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	96.63
COG0002	349	ArgC Acetylglutamate semialdehyde dehydrogenase [A	96.62
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	96.62
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	96.61
PLN02545	295	3-hydroxybutyryl-CoA dehydrogenase	96.61
COG2130	340	Putative NADP-dependent oxidoreductases [General f	96.6
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	96.59
COG0026	375	PurK Phosphoribosylaminoimidazole carboxylase (NCA	96.59
PRK09288	395	purT phosphoribosylglycinamide formyltransferase 2	96.59
COG0136	334	Asd Aspartate-semialdehyde dehydrogenase [Amino ac	96.57
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.57
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	96.56
PLN00203	519	glutamyl-tRNA reductase	96.56
PRK07417	279	arogenate dehydrogenase; Reviewed	96.54
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	96.54
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.51
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	96.51
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	96.49
PRK07530	292	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.49
PRK08328	231	hypothetical protein; Provisional	96.49
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	96.47
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	96.47
PRK15461	296	NADH-dependent gamma-hydroxybutyrate dehydrogenase	96.47
PRK15182	425	Vi polysaccharide biosynthesis protein TviB; Provi	96.45
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	96.44
PRK08223	287	hypothetical protein; Validated	96.42
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	96.4
TIGR01851	310	argC_other N-acetyl-gamma-glutamyl-phosphate reduc	96.39
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	96.39
PRK11880	267	pyrroline-5-carboxylate reductase; Reviewed	96.39
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	96.39
PRK05808	282	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.38
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	96.37
TIGR01745	366	asd_gamma aspartate-semialdehyde dehydrogenase, ga	96.35
PRK13304	265	L-aspartate dehydrogenase; Reviewed	96.34
PLN02712	667	arogenate dehydrogenase	96.32
PRK08057	248	cobalt-precorrin-6x reductase; Reviewed	96.31
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.3
PRK06444	197	prephenate dehydrogenase; Provisional	96.3
COG1712	255	Predicted dinucleotide-utilizing enzyme [General f	96.3
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	96.3
TIGR01771	299	L-LDH-NAD L-lactate dehydrogenase. This model repr	96.28
PRK06035	291	3-hydroxyacyl-CoA dehydrogenase; Validated	96.26
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.26
TIGR01505	291	tartro_sem_red 2-hydroxy-3-oxopropionate reductase	96.25
PRK07574	385	formate dehydrogenase; Provisional	96.25
PRK13302	271	putative L-aspartate dehydrogenase; Provisional	96.25
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	96.23
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	96.19
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	96.18
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	96.16
PRK12490	299	6-phosphogluconate dehydrogenase-like protein; Rev	96.16
COG0287	279	TyrA Prephenate dehydrogenase [Amino acid transpor	96.13
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	96.11
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	96.11
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	96.1
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	96.09
PRK06719	157	precorrin-2 dehydrogenase; Validated	96.05
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	96.04
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	96.03
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	96.02
PF00070	80	Pyr_redox: Pyridine nucleotide-disulphide oxidored	96.0
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	96.0
PRK12491	272	pyrroline-5-carboxylate reductase; Reviewed	95.99
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	95.98
cd01079	197	NAD_bind_m-THF_DH NAD binding domain of methylene-	95.98
PRK12480	330	D-lactate dehydrogenase; Provisional	95.96
COG2084	286	MmsB 3-hydroxyisobutyrate dehydrogenase and relate	95.93
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	95.93
PLN02256	304	arogenate dehydrogenase	95.92
PF13380	116	CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5	95.92
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	95.92
PLN03139	386	formate dehydrogenase; Provisional	95.91
PRK08818	370	prephenate dehydrogenase; Provisional	95.89
PRK13243	333	glyoxylate reductase; Reviewed	95.88
PLN02928	347	oxidoreductase family protein	95.87
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.86
PTZ00142	470	6-phosphogluconate dehydrogenase; Provisional	95.85
PRK04207	341	glyceraldehyde-3-phosphate dehydrogenase; Provisio	95.85
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	95.82

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=100.00  E-value=2.5e-45  Score=302.93  Aligned_cols=288  Identities=44%  Similarity=0.736  Sum_probs=260.8

Q ss_pred             EEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc-CCCEEEEccCCCCCCC
Q 017977           53 VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-GSTAVVNLAGTPIGTR  131 (363)
Q Consensus        53 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~d~Vi~~a~~~~~~~  131 (363)
                      |+|||||||||++|+..|.+.||+|++++|++.........         .+...+.+.+..+ ++|+|||+||.+....
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~~---------~v~~~~~~~~~~~~~~DavINLAG~~I~~r   71 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLHP---------NVTLWEGLADALTLGIDAVINLAGEPIAER   71 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcCc---------cccccchhhhcccCCCCEEEECCCCccccc
Confidence            68999999999999999999999999999999876654322         1113344555555 7999999999988865


Q ss_pred             -CChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccc-eecC---CcccccccCCCcchhhhhhhcccchhhHHH
Q 017977          132 -WSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKP-KYLM---RAAHQEMITWLSDYCAKVYCLVSFNRGVLV  206 (363)
Q Consensus       132 -~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~-~~yg---~~~~~e~~~~~~~~~~~~~~~~~y~~~k~~  206 (363)
                       |+.+..+.+.+.-+..|+.|++++.+  ...+.-+++|.++ +.||   +..++|+.++...|.+.            +
T Consensus        72 rWt~~~K~~i~~SRi~~T~~L~e~I~~--~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~Fla~------------l  137 (297)
T COG1090          72 RWTEKQKEEIRQSRINTTEKLVELIAA--SETKPKVLISASAVGYYGHSGDRVVTEESPPGDDFLAQ------------L  137 (297)
T ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHHh--ccCCCcEEEecceEEEecCCCceeeecCCCCCCChHHH------------H
Confidence             99999999999999999999999998  4445556677666 9999   78999999999999998            9


Q ss_pred             HHHHHHHHhccCC-CceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHHHHHhcCCCCCce
Q 017977          207 CREWEGTALKVNK-DVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGV  285 (363)
Q Consensus       207 ~~~~~~~~~~~~~-~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~g~  285 (363)
                      |..||.+....+. |.+++++|.|.|.++.++.+..+.+.++...|.++|+|.|+++|||++|+++++..++++....|.
T Consensus       138 c~~WE~~a~~a~~~gtRvvllRtGvVLs~~GGaL~~m~~~fk~glGG~~GsGrQ~~SWIhieD~v~~I~fll~~~~lsGp  217 (297)
T COG1090         138 CQDWEEEALQAQQLGTRVVLLRTGVVLSPDGGALGKMLPLFKLGLGGKLGSGRQWFSWIHIEDLVNAILFLLENEQLSGP  217 (297)
T ss_pred             HHHHHHHHhhhhhcCceEEEEEEEEEecCCCcchhhhcchhhhccCCccCCCCceeeeeeHHHHHHHHHHHHhCcCCCCc
Confidence            9999999988876 999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEeeCCCCcCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhccCceeeecCcccChhhHHHcCCCcccccHHHHHHHHhC
Q 017977          286 INGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIMS  363 (363)
Q Consensus       286 ~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~p~~~~~~~~l~~~~~  363 (363)
                      ||++++.|++.+++...+.+.++++.++++|++..+..+|+....++.++++-++|+.+.||+++|++++++|++++.
T Consensus       218 ~N~taP~PV~~~~F~~al~r~l~RP~~~~vP~~~~rl~LGe~a~~lL~gQrvlP~kl~~aGF~F~y~dl~~AL~~il~  295 (297)
T COG1090         218 FNLTAPNPVRNKEFAHALGRALHRPAILPVPSFALRLLLGEMADLLLGGQRVLPKKLEAAGFQFQYPDLEEALADILK  295 (297)
T ss_pred             ccccCCCcCcHHHHHHHHHHHhCCCccccCcHHHHHHHhhhhHHHHhccchhhHHHHHHCCCeeecCCHHHHHHHHHh
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999999873

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=9.4e-42  Score=285.04  Aligned_cols=287  Identities=21%  Similarity=0.243  Sum_probs=223.2

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc--CCCEEEEccCCCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGTPI  128 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~Vi~~a~~~~  128 (363)
                      |+||||||+||||+|.+.+|++.|++|++++.-............ ..+..+|+.|.+.+.+.|+  ++|+|||+||. .
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~-~~f~~gDi~D~~~L~~vf~~~~idaViHFAa~-~   78 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQ-FKFYEGDLLDRALLTAVFEENKIDAVVHFAAS-I   78 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhcc-CceEEeccccHHHHHHHHHhcCCCEEEECccc-c
Confidence            689999999999999999999999999999986654333222110 1277789999999999986  68999999997 4


Q ss_pred             CCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC---CcccccccCCC--cchhhhhhhcccchhh
Q 017977          129 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM---RAAHQEMITWL--SDYCAKVYCLVSFNRG  203 (363)
Q Consensus       129 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg---~~~~~e~~~~~--~~~~~~~~~~~~y~~~  203 (363)
                      .+..+.+.+..+++.|+.+|.+|+++|++  .++++|||.||+ .+||   ..|++|+.+..  ++|+.          +
T Consensus        79 ~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~--~gv~~~vFSStA-avYG~p~~~PI~E~~~~~p~NPYG~----------s  145 (329)
T COG1087          79 SVGESVQNPLKYYDNNVVGTLNLIEAMLQ--TGVKKFIFSSTA-AVYGEPTTSPISETSPLAPINPYGR----------S  145 (329)
T ss_pred             ccchhhhCHHHHHhhchHhHHHHHHHHHH--hCCCEEEEecch-hhcCCCCCcccCCCCCCCCCCcchh----------H
Confidence            55667788999999999999999999999  899999998888 9999   56899988843  35554          4


Q ss_pred             HHHHHHHHHHHhccCCCceEEEEeeceEEeCCC--------CcccchHHHH-HHHhCCC--C---------CCCCCcccc
Q 017977          204 VLVCREWEGTALKVNKDVRLALIRIGIVLGKDG--------GALAKMIPLF-MMFAGGP--L---------GSGQQWFSW  263 (363)
Q Consensus       204 k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~--------~~~~~~~~~~-~~~~~~~--~---------~~~~~~~~~  263 (363)
                      |++.++........ .+++++++|..++.|...        ...+.+++.. +...|+.  +         .+|.-.||+
T Consensus       146 Klm~E~iL~d~~~a-~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRDY  224 (329)
T COG1087         146 KLMSEEILRDAAKA-NPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDY  224 (329)
T ss_pred             HHHHHHHHHHHHHh-CCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCeeeee
Confidence            65666666655554 489999999999998642        1235677766 3333332  1         577778999


Q ss_pred             ccHHHHHHHHHHHhcCCC---CCceEEeeCCCCcCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhccCceeeecCcccChh
Q 017977          264 IHLDDIVNLIYEALSNPS---YRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPA  340 (363)
Q Consensus       264 i~v~D~a~a~~~~~~~~~---~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  340 (363)
                      |||.|+|+|.+.+++.-.   ...+||+++|...|+.|+++.++++.|++.++.+    .....++...++.+     ++
T Consensus       225 IHV~DLA~aH~~Al~~L~~~g~~~~~NLG~G~G~SV~evi~a~~~vtg~~ip~~~----~~RR~GDpa~l~Ad-----~~  295 (329)
T COG1087         225 IHVDDLADAHVLALKYLKEGGSNNIFNLGSGNGFSVLEVIEAAKKVTGRDIPVEI----APRRAGDPAILVAD-----SS  295 (329)
T ss_pred             eehhHHHHHHHHHHHHHHhCCceeEEEccCCCceeHHHHHHHHHHHhCCcCceee----CCCCCCCCceeEeC-----HH
Confidence            999999999999886433   2349999999999999999999999998733222    22234555555444     89


Q ss_pred             hHH-HcCCCcccccHHHHHHHHh
Q 017977          341 RAK-ELGFPFKYRYVKDALKAIM  362 (363)
Q Consensus       341 k~~-~lG~~p~~~~~~~~l~~~~  362 (363)
                      |++ +|||+|+++++++.++..+
T Consensus       296 kA~~~Lgw~p~~~~L~~ii~~aw  318 (329)
T COG1087         296 KARQILGWQPTYDDLEDIIKDAW  318 (329)
T ss_pred             HHHHHhCCCcccCCHHHHHHHHH
Confidence            996 5999999977999998765

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=4.7e-41  Score=279.37  Aligned_cols=289  Identities=17%  Similarity=0.137  Sum_probs=228.1

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCC--CEEEEEeCCCC-----cccccCCCCCccccCcccccCcchHHhhcc--CCCEEE
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRS-----KAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVV  121 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~-----~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~Vi  121 (363)
                      |++|||||+||||++++++++++.  .+|+++++-.-     ....+.. .....+.++|+.|.+.+.++++  ++|+|+
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~-~~~~~fv~~DI~D~~~v~~~~~~~~~D~Vv   79 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVED-SPRYRFVQGDICDRELVDRLFKEYQPDAVV   79 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhc-CCCceEEeccccCHHHHHHHHHhcCCCeEE
Confidence            589999999999999999999875  46788776331     1111211 1123367789999999999998  589999


Q ss_pred             EccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCC-CCeEEEeccceecC-----CcccccccC--CCcchhhh
Q 017977          122 NLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGV-RPSVLELVKPKYLM-----RAAHQEMIT--WLSDYCAK  193 (363)
Q Consensus       122 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~v~~SS~~~~yg-----~~~~~e~~~--~~~~~~~~  193 (363)
                      |+|+.. .++.+-..+..++++|+.||.+|++++++  ... -+|+++|+- .|||     +..++|.+|  |.++|.++
T Consensus        80 hfAAES-HVDRSI~~P~~Fi~TNv~GT~~LLEaar~--~~~~frf~HISTD-EVYG~l~~~~~~FtE~tp~~PsSPYSAS  155 (340)
T COG1088          80 HFAAES-HVDRSIDGPAPFIQTNVVGTYTLLEAARK--YWGKFRFHHISTD-EVYGDLGLDDDAFTETTPYNPSSPYSAS  155 (340)
T ss_pred             Eechhc-cccccccChhhhhhcchHHHHHHHHHHHH--hcccceEEEeccc-cccccccCCCCCcccCCCCCCCCCcchh
Confidence            999984 45667777899999999999999999999  554 479999999 9999     235778887  55678777


Q ss_pred             hhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHH--HHHhCCCC---CCCCCccccccHHH
Q 017977          194 VYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL---GSGQQWFSWIHLDD  268 (363)
Q Consensus       194 ~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~D  268 (363)
                      |           +........+...+|++++|.|+++-|||.+.. ..++|.+  +++.|+++   |+|.+.|||+||+|
T Consensus       156 K-----------AasD~lVray~~TYglp~~ItrcSNNYGPyqfp-EKlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeD  223 (340)
T COG1088         156 K-----------AASDLLVRAYVRTYGLPATITRCSNNYGPYQFP-EKLIPLMIINALLGKPLPVYGDGLQIRDWLYVED  223 (340)
T ss_pred             h-----------hhHHHHHHHHHHHcCCceEEecCCCCcCCCcCc-hhhhHHHHHHHHcCCCCceecCCcceeeeEEeHh
Confidence            5           567777778888889999999999999998754 4667666  77888876   99999999999999


Q ss_pred             HHHHHHHHhcCCCCCceEEeeCCCCcCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhccCceee--ecCcccChhhH-HHc
Q 017977          269 IVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVV--LEGQRVVPARA-KEL  345 (363)
Q Consensus       269 ~a~a~~~~~~~~~~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~k~-~~l  345 (363)
                      -|+|+..++.+...+.+|||+++...+.-|+++.|++.+|+....      .+....-.....  ...+.++.+|+ ++|
T Consensus       224 h~~ai~~Vl~kg~~GE~YNIgg~~E~~Nlevv~~i~~~l~~~~~~------~~~li~~V~DRpGHD~RYaid~~Ki~~eL  297 (340)
T COG1088         224 HCRAIDLVLTKGKIGETYNIGGGNERTNLEVVKTICELLGKDKPD------YRDLITFVEDRPGHDRRYAIDASKIKREL  297 (340)
T ss_pred             HHHHHHHHHhcCcCCceEEeCCCccchHHHHHHHHHHHhCccccc------hhhheEeccCCCCCccceeechHHHhhhc
Confidence            999999999998887799999999999999999999999987421      111111000111  12344678998 579


Q ss_pred             CCCcccccHHHHHHHHhC
Q 017977          346 GFPFKYRYVKDALKAIMS  363 (363)
Q Consensus       346 G~~p~~~~~~~~l~~~~~  363 (363)
                      ||.|+++ +|+||+++++
T Consensus       298 gW~P~~~-fe~GlrkTv~  314 (340)
T COG1088         298 GWRPQET-FETGLRKTVD  314 (340)
T ss_pred             CCCcCCC-HHHHHHHHHH
Confidence            9999987 9999999874

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=100.00  E-value=2.4e-40  Score=300.99  Aligned_cols=298  Identities=13%  Similarity=0.078  Sum_probs=213.0

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCccccc----CC---C--CCccccCcccccCcchHHhhccCCC
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI----FP---G--KKTRFFPGVMIAEEPQWRDCIQGST  118 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~---~--~~~~~~~~~d~~~~~~~~~~~~~~d  118 (363)
                      ..+|+|||||||||||++|+++|+++|++|++++|........    ..   .  .....+..+|+.|.+.+..+++++|
T Consensus        13 ~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~~d   92 (348)
T PRK15181         13 LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKNVD   92 (348)
T ss_pred             ccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhCCC
Confidence            3457999999999999999999999999999999865421110    00   0  0111244579999888999999999


Q ss_pred             EEEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC---CcccccccCCCcchhhhhh
Q 017977          119 AVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM---RAAHQEMITWLSDYCAKVY  195 (363)
Q Consensus       119 ~Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg---~~~~~e~~~~~~~~~~~~~  195 (363)
                      +|||+|+.... .....++...+++|+.++.+++++|++  .++++|||+||. ++||   ..+..|+.+..+       
T Consensus        93 ~ViHlAa~~~~-~~~~~~~~~~~~~Nv~gt~nll~~~~~--~~~~~~v~~SS~-~vyg~~~~~~~~e~~~~~p-------  161 (348)
T PRK15181         93 YVLHQAALGSV-PRSLKDPIATNSANIDGFLNMLTAARD--AHVSSFTYAASS-STYGDHPDLPKIEERIGRP-------  161 (348)
T ss_pred             EEEECccccCc-hhhhhCHHHHHHHHHHHHHHHHHHHHH--cCCCeEEEeech-HhhCCCCCCCCCCCCCCCC-------
Confidence            99999997432 233445677899999999999999999  789999999999 8998   234455443221       


Q ss_pred             hcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCc---ccchHHHH--HHHhCCCC---CCCCCccccccHH
Q 017977          196 CLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA---LAKMIPLF--MMFAGGPL---GSGQQWFSWIHLD  267 (363)
Q Consensus       196 ~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~---~~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~  267 (363)
                       .+.|+.+|...+.+.... ....+++++++||+++|||++..   ...+++.+  +...++++   +++.+.++|+|++
T Consensus       162 -~~~Y~~sK~~~e~~~~~~-~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~  239 (348)
T PRK15181        162 -LSPYAVTKYVNELYADVF-ARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIE  239 (348)
T ss_pred             -CChhhHHHHHHHHHHHHH-HHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEeeEEHH
Confidence             123666676555554443 33359999999999999997532   22344444  44556654   7788899999999


Q ss_pred             HHHHHHHHHhcCCC---CCceEEeeCCCCcCHHHHHHHHHHHhCCCCCCCC-cHHHHHHHhccCceeeecCcccChhhHH
Q 017977          268 DIVNLIYEALSNPS---YRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPV-PEFALKAVLGEGAFVVLEGQRVVPARAK  343 (363)
Q Consensus       268 D~a~a~~~~~~~~~---~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~k~~  343 (363)
                      |+|++++.++....   .+++||++++++++++|+++.+.+.++....... ....    +.............+++|++
T Consensus       240 D~a~a~~~~~~~~~~~~~~~~yni~~g~~~s~~e~~~~i~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~d~~k~~  315 (348)
T PRK15181        240 NVIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPI----YKDFRDGDVKHSQADITKIK  315 (348)
T ss_pred             HHHHHHHHHHhcccccCCCCEEEecCCCcEeHHHHHHHHHHHhCcccccccCCCcc----cCCCCCCcccccccCHHHHH
Confidence            99999998775432   3569999999999999999999999974311000 0000    11111111123456899996


Q ss_pred             H-cCCCcccccHHHHHHHHhC
Q 017977          344 E-LGFPFKYRYVKDALKAIMS  363 (363)
Q Consensus       344 ~-lG~~p~~~~~~~~l~~~~~  363 (363)
                      + |||.|+++ ++|+|+++++
T Consensus       316 ~~lGw~P~~s-l~egl~~~~~  335 (348)
T PRK15181        316 TFLSYEPEFD-IKEGLKQTLK  335 (348)
T ss_pred             HHhCCCCCCC-HHHHHHHHHH
Confidence            5 89999997 9999999863

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=100.00  E-value=1.8e-39  Score=279.27  Aligned_cols=298  Identities=20%  Similarity=0.233  Sum_probs=225.0

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCccc------ccCCCCCccccCcccccCcchHHhhccCCCEEEE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE------LIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVN  122 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~------~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~  122 (363)
                      .+|+|+||||+||||++|++.|+++||.|+++.|+++...      ++............|+.|.+++..++++||.|||
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgVfH   84 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGVFH   84 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEEEE
Confidence            4579999999999999999999999999999999998732      2222221122445799999999999999999999


Q ss_pred             ccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC-------CcccccccCCCcchhhhhh
Q 017977          123 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM-------RAAHQEMITWLSDYCAKVY  195 (363)
Q Consensus       123 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg-------~~~~~e~~~~~~~~~~~~~  195 (363)
                      +|.........  .+.+..+..+.|+.|++++|.+. ..++|+||+||.+++..       ...++|+.+....|...+-
T Consensus        85 ~Asp~~~~~~~--~e~~li~pav~Gt~nVL~ac~~~-~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~  161 (327)
T KOG1502|consen   85 TASPVDFDLED--PEKELIDPAVKGTKNVLEACKKT-KSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCKK  161 (327)
T ss_pred             eCccCCCCCCC--cHHhhhhHHHHHHHHHHHHHhcc-CCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhhH
Confidence            99975332222  45689999999999999999995 35999999999985553       5578888888888765432


Q ss_pred             hcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCc--ccchHHHHHHHhCCCCCCCCCccccccHHHHHHHH
Q 017977          196 CLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA--LAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLI  273 (363)
Q Consensus       196 ~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~  273 (363)
                        .-|..+|-++++..++..... +++.+.+.|+.|+||....  ...........+|..-........+|||+|+|.|.
T Consensus       162 --~~Y~~sK~lAEkaAw~fa~e~-~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~n~~~~~VdVrDVA~AH  238 (327)
T KOG1502|consen  162 --LWYALSKTLAEKAAWEFAKEN-GLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYPNFWLAFVDVRDVALAH  238 (327)
T ss_pred             --HHHHHHHHHHHHHHHHHHHhC-CccEEEecCCceECCCcccccchhHHHHHHHHhcccccCCCCceeeEeHHHHHHHH
Confidence              568888877777777666665 9999999999999997543  22233444666664433334445599999999999


Q ss_pred             HHHhcCCCCCceEEeeCCCCcCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhccCceeeecCcccChhhHHHcC-CCcccc
Q 017977          274 YEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELG-FPFKYR  352 (363)
Q Consensus       274 ~~~~~~~~~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG-~~p~~~  352 (363)
                      +.+++++..+|+|.+.+.. .++.|+++.+.+.+..-.   +|..     ..+.....+....++++|+++|| |+++  
T Consensus       239 v~a~E~~~a~GRyic~~~~-~~~~ei~~~l~~~~P~~~---ip~~-----~~~~~~~~~~~~~~~~~k~k~lg~~~~~--  307 (327)
T KOG1502|consen  239 VLALEKPSAKGRYICVGEV-VSIKEIADILRELFPDYP---IPKK-----NAEEHEGFLTSFKVSSEKLKSLGGFKFR--  307 (327)
T ss_pred             HHHHcCcccCceEEEecCc-ccHHHHHHHHHHhCCCCC---CCCC-----CCccccccccccccccHHHHhcccceec--
Confidence            9999999999999999965 669999999999996542   2211     11111222233457899999988 6665  


Q ss_pred             cHHHHHHHHhC
Q 017977          353 YVKDALKAIMS  363 (363)
Q Consensus       353 ~~~~~l~~~~~  363 (363)
                      +++|.+.++++
T Consensus       308 ~l~e~~~dt~~  318 (327)
T KOG1502|consen  308 PLEETLSDTVE  318 (327)
T ss_pred             ChHHHHHHHHH
Confidence            59999988763

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=100.00  E-value=3.2e-38  Score=281.16  Aligned_cols=285  Identities=44%  Similarity=0.728  Sum_probs=212.0

Q ss_pred             EEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCCCCC-CC
Q 017977           53 VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIG-TR  131 (363)
Q Consensus        53 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~~~~-~~  131 (363)
                      |||||||||||+++++.|+++|++|++++|++.........      ...++ +...+.+.+.++|+|||+|+.... ..
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~------~~~~~-~~~~~~~~~~~~D~Vvh~a~~~~~~~~   73 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKWE------GYKPW-APLAESEALEGADAVINLAGEPIADKR   73 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccce------eeecc-cccchhhhcCCCCEEEECCCCCccccc
Confidence            69999999999999999999999999999988765432211      01122 224456677899999999997432 23


Q ss_pred             CChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccc-eecC---CcccccccCC-CcchhhhhhhcccchhhHHH
Q 017977          132 WSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKP-KYLM---RAAHQEMITW-LSDYCAKVYCLVSFNRGVLV  206 (363)
Q Consensus       132 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~-~~yg---~~~~~e~~~~-~~~~~~~~~~~~~y~~~k~~  206 (363)
                      +.......+++.|+.++.++++++.+  .++++.+++++++ ++||   ..+++|+.++ ...|...            .
T Consensus        74 ~~~~~~~~~~~~n~~~~~~l~~a~~~--~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~~~~~~~------------~  139 (292)
T TIGR01777        74 WTEERKQEIRDSRIDTTRALVEAIAA--AEQKPKVFISASAVGYYGTSEDRVFTEEDSPAGDDFLAE------------L  139 (292)
T ss_pred             CCHHHHHHHHhcccHHHHHHHHHHHh--cCCCceEEEEeeeEEEeCCCCCCCcCcccCCCCCChHHH------------H
Confidence            45556678899999999999999999  6764433433332 7888   3566777633 2223222            2


Q ss_pred             HHHHHHHHhc-cCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHHHHHhcCCCCCce
Q 017977          207 CREWEGTALK-VNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGV  285 (363)
Q Consensus       207 ~~~~~~~~~~-~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~g~  285 (363)
                      +.+++..... ...+++++++||+.+||+..+....+...+....+.+++++++.++++|++|+|+++..+++++...|+
T Consensus       140 ~~~~e~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~v~Dva~~i~~~l~~~~~~g~  219 (292)
T TIGR01777       140 CRDWEEAAQAAEDLGTRVVLLRTGIVLGPKGGALAKMLPPFRLGLGGPLGSGRQWFSWIHIEDLVQLILFALENASISGP  219 (292)
T ss_pred             HHHHHHHhhhchhcCCceEEEeeeeEECCCcchhHHHHHHHhcCcccccCCCCcccccEeHHHHHHHHHHHhcCcccCCc
Confidence            3334333222 223899999999999999765444444334333444567788899999999999999999988766789


Q ss_pred             EEeeCCCCcCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhccCceeeecCcccChhhHHHcCCCcccccHHHHH
Q 017977          286 INGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDAL  358 (363)
Q Consensus       286 ~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~p~~~~~~~~l  358 (363)
                      ||+++++++++.|+++.+.+.+|.+..+++|.+.....++........+++++++|++++||+|++++++|++
T Consensus       220 ~~~~~~~~~s~~di~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  292 (292)
T TIGR01777       220 VNATAPEPVRNKEFAKALARALHRPAFFPVPAFVLRALLGEMADLLLKGQRVLPEKLLEAGFQFQYPDLDEAL  292 (292)
T ss_pred             eEecCCCccCHHHHHHHHHHHhCCCCcCcCCHHHHHHHhchhhHHHhCCcccccHHHHhcCCeeeCcChhhcC
Confidence            9999999999999999999999998778899998877666555555667888999999999999998798874

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=100.00  E-value=8e-38  Score=289.72  Aligned_cols=290  Identities=15%  Similarity=0.165  Sum_probs=205.0

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccc-cCCCCCccccCcccccCcchHHhhccCCCEEEEccCCCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL-IFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPI  128 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~~~  128 (363)
                      .|||||||||||||++|+++|+++|++|++++|....... ......   ...+++.+.|.+...+.++|+|||+|+...
T Consensus       120 ~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~---~~~~~~~~~Di~~~~~~~~D~ViHlAa~~~  196 (436)
T PLN02166        120 RLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFG---NPRFELIRHDVVEPILLEVDQIYHLACPAS  196 (436)
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhcc---CCceEEEECccccccccCCCEEEECceecc
Confidence            4799999999999999999999999999999986432111 100000   112444455545555678999999998643


Q ss_pred             CCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC---CcccccccCCC-cchhhhhhhcccchhhH
Q 017977          129 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM---RAAHQEMITWL-SDYCAKVYCLVSFNRGV  204 (363)
Q Consensus       129 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg---~~~~~e~~~~~-~~~~~~~~~~~~y~~~k  204 (363)
                      .. ....++...+++|+.++.+++++|++  .++ ++||+||. ++||   ..+.+|+.+.. .+..    ..+.|+.+|
T Consensus       197 ~~-~~~~~p~~~~~~Nv~gT~nLleaa~~--~g~-r~V~~SS~-~VYg~~~~~p~~E~~~~~~~p~~----p~s~Yg~SK  267 (436)
T PLN02166        197 PV-HYKYNPVKTIKTNVMGTLNMLGLAKR--VGA-RFLLTSTS-EVYGDPLEHPQKETYWGNVNPIG----ERSCYDEGK  267 (436)
T ss_pred             ch-hhccCHHHHHHHHHHHHHHHHHHHHH--hCC-EEEEECcH-HHhCCCCCCCCCccccccCCCCC----CCCchHHHH
Confidence            22 22335678899999999999999999  665 79999999 9999   34566653211 0111    123466777


Q ss_pred             HHHHHHHHHHhccCCCceEEEEeeceEEeCCCCc-ccchHHHH--HHHhCCCC---CCCCCccccccHHHHHHHHHHHhc
Q 017977          205 LVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA-LAKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIYEALS  278 (363)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~-~~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~D~a~a~~~~~~  278 (363)
                      +.++........ ..+++++++||+++|||+... ...++..+  +...++++   +++.+.++|+|++|+|++++.+++
T Consensus       268 ~~aE~~~~~y~~-~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dva~ai~~~~~  346 (436)
T PLN02166        268 RTAETLAMDYHR-GAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGLVALME  346 (436)
T ss_pred             HHHHHHHHHHHH-HhCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHh
Confidence            666555544433 348999999999999997532 22334333  44455554   677889999999999999999987


Q ss_pred             CCCCCceEEeeCCCCcCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhccCceeeecCcccChhhHHH-cCCCcccccHHHH
Q 017977          279 NPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYRYVKDA  357 (363)
Q Consensus       279 ~~~~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lG~~p~~~~~~~~  357 (363)
                      .. ..|+||+++++.+++.|+++.|.+.+|.+..+.....  +  .++     .....++++|+++ |||+|+++ ++++
T Consensus       347 ~~-~~giyNIgs~~~~Si~ela~~I~~~~g~~~~i~~~p~--~--~~~-----~~~~~~d~~Ka~~~LGw~P~~s-l~eg  415 (436)
T PLN02166        347 GE-HVGPFNLGNPGEFTMLELAEVVKETIDSSATIEFKPN--T--ADD-----PHKRKPDISKAKELLNWEPKIS-LREG  415 (436)
T ss_pred             cC-CCceEEeCCCCcEeHHHHHHHHHHHhCCCCCeeeCCC--C--CCC-----ccccccCHHHHHHHcCCCCCCC-HHHH
Confidence            54 4679999999999999999999999997632211100  0  001     1234568999975 89999997 9999


Q ss_pred             HHHHhC
Q 017977          358 LKAIMS  363 (363)
Q Consensus       358 l~~~~~  363 (363)
                      |+++++
T Consensus       416 l~~~i~  421 (436)
T PLN02166        416 LPLMVS  421 (436)
T ss_pred             HHHHHH
Confidence            998863

>PLN02214 cinnamoyl-CoA reductase

Probab=100.00  E-value=7.9e-38  Score=283.52  Aligned_cols=294  Identities=18%  Similarity=0.212  Sum_probs=208.6

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCccc-----ccCCCCCccccCcccccCcchHHhhccCCCEEEE
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE-----LIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVN  122 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~  122 (363)
                      .++|+||||||+||||++|+++|+++|++|++++|+.+...     .+........+..+|+.|.+++.++++++|+|||
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih   87 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAIDGCDGVFH   87 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCCEEEE
Confidence            34579999999999999999999999999999999765321     1111111122445799999999999999999999


Q ss_pred             ccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCC------cccccccCCCcchhhhhhh
Q 017977          123 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMR------AAHQEMITWLSDYCAKVYC  196 (363)
Q Consensus       123 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~------~~~~e~~~~~~~~~~~~~~  196 (363)
                      +|+..      ...+...+++|+.++.+++++|.+  .+++++||+||.+++||.      .+++|+.+....+..  -.
T Consensus        88 ~A~~~------~~~~~~~~~~nv~gt~~ll~aa~~--~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~--~p  157 (342)
T PLN02214         88 TASPV------TDDPEQMVEPAVNGAKFVINAAAE--AKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCK--NT  157 (342)
T ss_pred             ecCCC------CCCHHHHHHHHHHHHHHHHHHHHh--cCCCEEEEeccceeeeccCCCCCCcccCcccCCChhhcc--cc
Confidence            99863      123578899999999999999999  788899999997578871      236776542111110  01


Q ss_pred             cccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCc-c-cchHHHHHHHhCCCCCCCCCccccccHHHHHHHHH
Q 017977          197 LVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA-L-AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY  274 (363)
Q Consensus       197 ~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~  274 (363)
                      .+.|+.+|+..+........ ..+++++++||++||||.... . ..+...+....+.....+++.++|||++|+|++++
T Consensus       158 ~~~Y~~sK~~aE~~~~~~~~-~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~V~Dva~a~~  236 (342)
T PLN02214        158 KNWYCYGKMVAEQAAWETAK-EKGVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLTQAYVDVRDVALAHV  236 (342)
T ss_pred             ccHHHHHHHHHHHHHHHHHH-HcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcccCCCCCcCeeEHHHHHHHHH
Confidence            23477777655555444333 349999999999999997532 1 11222234445544444566789999999999999


Q ss_pred             HHhcCCCCCceEEeeCCCCcCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhccCceeeecCcccChhhHHHcCCCcccccH
Q 017977          275 EALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYV  354 (363)
Q Consensus       275 ~~~~~~~~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~p~~~~~  354 (363)
                      .+++++..+|.||+++ ..++++|+++.+.+.++..   ++|....     ...........+|++|+++|||+|+ + +
T Consensus       237 ~al~~~~~~g~yn~~~-~~~~~~el~~~i~~~~~~~---~~~~~~~-----~~~~~~~~~~~~d~~k~~~LG~~p~-~-l  305 (342)
T PLN02214        237 LVYEAPSASGRYLLAE-SARHRGEVVEILAKLFPEY---PLPTKCK-----DEKNPRAKPYKFTNQKIKDLGLEFT-S-T  305 (342)
T ss_pred             HHHhCcccCCcEEEec-CCCCHHHHHHHHHHHCCCC---CCCCCCc-----cccCCCCCccccCcHHHHHcCCccc-C-H
Confidence            9998776667999987 4689999999999999632   1111100     0000111234578999988999995 4 9


Q ss_pred             HHHHHHHhC
Q 017977          355 KDALKAIMS  363 (363)
Q Consensus       355 ~~~l~~~~~  363 (363)
                      +|+|+++++
T Consensus       306 ee~i~~~~~  314 (342)
T PLN02214        306 KQSLYDTVK  314 (342)
T ss_pred             HHHHHHHHH
Confidence            999999863

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=100.00  E-value=3e-37  Score=281.10  Aligned_cols=303  Identities=13%  Similarity=0.121  Sum_probs=207.8

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhC-CCEEEEEeCCCCcccccCCCCCccccCccccc-CcchHHhhccCCCEEEEccCCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIA-EEPQWRDCIQGSTAVVNLAGTP  127 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~~~~~d~Vi~~a~~~  127 (363)
                      ||+|||||||||||++|+++|+++ |++|++++|+......+..... ..+..+|+. +.+.+.++++++|+|||+|+..
T Consensus         1 m~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~~~~-~~~~~~Dl~~~~~~~~~~~~~~d~ViH~aa~~   79 (347)
T PRK11908          1 MKKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVNHPR-MHFFEGDITINKEWIEYHVKKCDVILPLVAIA   79 (347)
T ss_pred             CcEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhccCCC-eEEEeCCCCCCHHHHHHHHcCCCEEEECcccC
Confidence            479999999999999999999986 6999999987643332222111 224457887 5667778888999999999864


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC---CcccccccCCCc--chhhhhhhcccchh
Q 017977          128 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM---RAAHQEMITWLS--DYCAKVYCLVSFNR  202 (363)
Q Consensus       128 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg---~~~~~e~~~~~~--~~~~~~~~~~~y~~  202 (363)
                      ... ....++...+++|+.++.+++++|++  .+ +++||+||. .+||   ..+++|+.++..  +...   ..+.|+.
T Consensus        80 ~~~-~~~~~p~~~~~~n~~~~~~ll~aa~~--~~-~~~v~~SS~-~vyg~~~~~~~~ee~~~~~~~~~~~---p~~~Y~~  151 (347)
T PRK11908         80 TPA-TYVKQPLRVFELDFEANLPIVRSAVK--YG-KHLVFPSTS-EVYGMCPDEEFDPEASPLVYGPINK---PRWIYAC  151 (347)
T ss_pred             ChH-HhhcCcHHHHHHHHHHHHHHHHHHHh--cC-CeEEEEecc-eeeccCCCcCcCccccccccCcCCC---ccchHHH
Confidence            322 22345677889999999999999998  56 689999999 8998   234555543210  1100   1233777


Q ss_pred             hHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCc-------ccchHHHH--HHHhCCCC---CCCCCccccccHHHHH
Q 017977          203 GVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA-------LAKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIV  270 (363)
Q Consensus       203 ~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~-------~~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~D~a  270 (363)
                      +|..+++........ .+++++++||+++|||+...       ...+++.+  ....+.++   +.+++.++|||++|+|
T Consensus       152 sK~~~e~~~~~~~~~-~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~v~D~a  230 (347)
T PRK11908        152 SKQLMDRVIWAYGME-EGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDIDDGI  230 (347)
T ss_pred             HHHHHHHHHHHHHHH-cCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeeccccHHHHH
Confidence            776666655554433 48999999999999997421       12344333  34455553   5678899999999999


Q ss_pred             HHHHHHhcCCC---CCceEEeeCC-CCcCHHHHHHHHHHHhCCCCCCCC---cHHHH---HHHhccCceeeecCcccChh
Q 017977          271 NLIYEALSNPS---YRGVINGTAP-NPVRLAEMCDHLGNVLGRPSWLPV---PEFAL---KAVLGEGAFVVLEGQRVVPA  340 (363)
Q Consensus       271 ~a~~~~~~~~~---~~g~~~i~~~-~~~s~~el~~~i~~~~g~~~~~~~---~~~~~---~~~~~~~~~~~~~~~~~~~~  340 (363)
                      ++++.+++++.   .+++||++++ ..+|++|+++.|.+.+|..+.+..   +....   ...+.............+++
T Consensus       231 ~a~~~~~~~~~~~~~g~~yni~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  310 (347)
T PRK11908        231 DALMKIIENKDGVASGKIYNIGNPKNNHSVRELANKMLELAAEYPEYAESAKKVKLVETTSGAYYGKGYQDVQNRVPKID  310 (347)
T ss_pred             HHHHHHHhCccccCCCCeEEeCCCCCCcCHHHHHHHHHHHhcCcccccccccccccccCCchhccCcCcchhccccCChH
Confidence            99999998753   3459999997 479999999999999996432210   00000   00000000001112334678


Q ss_pred             hHH-HcCCCcccccHHHHHHHHhC
Q 017977          341 RAK-ELGFPFKYRYVKDALKAIMS  363 (363)
Q Consensus       341 k~~-~lG~~p~~~~~~~~l~~~~~  363 (363)
                      |++ .|||+|+++ ++++|+++++
T Consensus       311 k~~~~lGw~p~~~-l~~~l~~~~~  333 (347)
T PRK11908        311 NTMQELGWAPKTT-MDDALRRIFE  333 (347)
T ss_pred             HHHHHcCCCCCCc-HHHHHHHHHH
Confidence            886 599999998 9999999863

>PLN02427 UDP-apiose/xylose synthase

Probab=100.00  E-value=3.4e-37  Score=284.53  Aligned_cols=303  Identities=15%  Similarity=0.180  Sum_probs=208.7

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhC-CCEEEEEeCCCCcccccCCC-----CCccccCcccccCcchHHhhccCCCEEEEc
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIFPG-----KKTRFFPGVMIAEEPQWRDCIQGSTAVVNL  123 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~  123 (363)
                      +|+|||||||||||++|+++|+++ |++|++++|+......+...     .....+..+|+.|.+.+.++++++|+|||+
T Consensus        14 ~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d~ViHl   93 (386)
T PLN02427         14 PLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMADLTINL   93 (386)
T ss_pred             CcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcCCEEEEc
Confidence            479999999999999999999998 59999999876543332211     011224567999999999999999999999


Q ss_pred             cCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCC---cccccccCCCc--chh--hh---
Q 017977          124 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMR---AAHQEMITWLS--DYC--AK---  193 (363)
Q Consensus       124 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~---~~~~e~~~~~~--~~~--~~---  193 (363)
                      |+......+ ...+.+.+..|+.++.+++++|++  .+ ++|||+||. ++||.   .+.+|+.+..+  .+.  .+   
T Consensus        94 Aa~~~~~~~-~~~~~~~~~~n~~gt~~ll~aa~~--~~-~r~v~~SS~-~vYg~~~~~~~~e~~p~~~~~~~~~~~e~~~  168 (386)
T PLN02427         94 AAICTPADY-NTRPLDTIYSNFIDALPVVKYCSE--NN-KRLIHFSTC-EVYGKTIGSFLPKDHPLRQDPAFYVLKEDES  168 (386)
T ss_pred             ccccChhhh-hhChHHHHHHHHHHHHHHHHHHHh--cC-CEEEEEeee-eeeCCCcCCCCCccccccccccccccccccc
Confidence            996432222 223445667899999999999988  55 789999999 89982   23344333111  000  00   


Q ss_pred             -------hhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCc----------ccchHHHH--HHHhCCCC
Q 017977          194 -------VYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA----------LAKMIPLF--MMFAGGPL  254 (363)
Q Consensus       194 -------~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~----------~~~~~~~~--~~~~~~~~  254 (363)
                             .-..+.|+.+|+.++....... ...+++++++||++||||+...          ...++..+  ....++++
T Consensus       169 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  247 (386)
T PLN02427        169 PCIFGSIEKQRWSYACAKQLIERLIYAEG-AENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRREPL  247 (386)
T ss_pred             ccccCCCCccccchHHHHHHHHHHHHHHH-hhcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHhcCCCe
Confidence                   0012458888876666655433 3348999999999999997421          12233333  34455554


Q ss_pred             ---CCCCCccccccHHHHHHHHHHHhcCCC--CCceEEeeCC-CCcCHHHHHHHHHHHhCCCCCC--------CCcHHHH
Q 017977          255 ---GSGQQWFSWIHLDDIVNLIYEALSNPS--YRGVINGTAP-NPVRLAEMCDHLGNVLGRPSWL--------PVPEFAL  320 (363)
Q Consensus       255 ---~~~~~~~~~i~v~D~a~a~~~~~~~~~--~~g~~~i~~~-~~~s~~el~~~i~~~~g~~~~~--------~~~~~~~  320 (363)
                         +++.+.++|||++|+|++++.+++++.  .+++||++++ +.+++.|+++.+.+.+|.....        ..+... 
T Consensus       248 ~~~g~g~~~r~~i~V~Dva~ai~~al~~~~~~~g~~yni~~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~-  326 (386)
T PLN02427        248 KLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMTEVYAKVSGEPALEEPTVDVSSKE-  326 (386)
T ss_pred             EEECCCCceECcEeHHHHHHHHHHHHhCcccccCceEEeCCCCCCccHHHHHHHHHHHhccccccccccccccccCccc-
Confidence               667888999999999999999998763  3459999997 5899999999999999853111        111100 


Q ss_pred             HHHhccCceeeecCcccChhhHHH-cCCCcccccHHHHHHHHhC
Q 017977          321 KAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYRYVKDALKAIMS  363 (363)
Q Consensus       321 ~~~~~~~~~~~~~~~~~~~~k~~~-lG~~p~~~~~~~~l~~~~~  363 (363)
                         +.............+.+|+++ |||+|+++ ++++|+++++
T Consensus       327 ---~~~~~~~~~~~~~~d~~k~~~~lGw~p~~~-l~~gl~~~~~  366 (386)
T PLN02427        327 ---FYGEGYDDSDKRIPDMTIINKQLGWNPKTS-LWDLLESTLT  366 (386)
T ss_pred             ---ccCccccchhhccCCHHHHHHhcCCCcCcc-HHHHHHHHHH
Confidence               000000011223457899965 89999997 9999999873

>PLN02572 UDP-sulfoquinovose synthase

Probab=100.00  E-value=5.1e-37  Score=285.68  Aligned_cols=312  Identities=15%  Similarity=0.087  Sum_probs=206.9

Q ss_pred             cccccccCCCCCCCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCccc-------ccC--------------CCC
Q 017977           36 FRVFCTSDHTQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE-------LIF--------------PGK   94 (363)
Q Consensus        36 ~~~~~~~~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-------~~~--------------~~~   94 (363)
                      +........+...++|+||||||+||||++|+++|+++|++|++++|......       ...              ...
T Consensus        33 ~~~~~~~~~~~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  112 (442)
T PLN02572         33 LATPSAPGSSSSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSG  112 (442)
T ss_pred             ccCCCCCCCCccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhC
Confidence            33333334455566789999999999999999999999999999875432110       000              000


Q ss_pred             CccccCcccccCcchHHhhcc--CCCEEEEccCCCCCCCCCh---hhHHHHHHHHHHHHHHHHHHHHhCCCCCC-CeEEE
Q 017977           95 KTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGTPIGTRWSS---EIKKEIKESRIRVTSKVVDLINESPEGVR-PSVLE  168 (363)
Q Consensus        95 ~~~~~~~~d~~~~~~~~~~~~--~~d~Vi~~a~~~~~~~~~~---~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~v~~  168 (363)
                      ....+..+|+.|.+.+.++++  ++|+|||+|+.... ....   ...+..+++|+.++.+++++|++  .+++ +||++
T Consensus       113 ~~v~~v~~Dl~d~~~v~~~l~~~~~D~ViHlAa~~~~-~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~--~gv~~~~V~~  189 (442)
T PLN02572        113 KEIELYVGDICDFEFLSEAFKSFEPDAVVHFGEQRSA-PYSMIDRSRAVFTQHNNVIGTLNVLFAIKE--FAPDCHLVKL  189 (442)
T ss_pred             CcceEEECCCCCHHHHHHHHHhCCCCEEEECCCcccC-hhhhcChhhHHHHHHHHHHHHHHHHHHHHH--hCCCccEEEE
Confidence            112245679999999999887  48999999976322 2222   23356678999999999999998  6775 89999


Q ss_pred             eccceecC--CcccccccCCCc------chhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc-
Q 017977          169 LVKPKYLM--RAAHQEMITWLS------DYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL-  239 (363)
Q Consensus       169 SS~~~~yg--~~~~~e~~~~~~------~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~-  239 (363)
                      ||. .+||  ..+++|......      .........+.|+.+|+..+.. ...+...+|++++++||+++|||++... 
T Consensus       190 SS~-~vYG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l-~~~~~~~~gl~~v~lR~~~vyGp~~~~~~  267 (442)
T PLN02572        190 GTM-GEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHN-IAFTCKAWGIRATDLNQGVVYGVRTDETM  267 (442)
T ss_pred             ecc-eecCCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHH-HHHHHHhcCCCEEEEecccccCCCCcccc
Confidence            999 9998  223333210000      0000000123477777554433 3344444599999999999999975320 


Q ss_pred             ---------------cchHHHH--HHHhCCCC---CCCCCccccccHHHHHHHHHHHhcCCCCC---ceEEeeCCCCcCH
Q 017977          240 ---------------AKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSNPSYR---GVINGTAPNPVRL  296 (363)
Q Consensus       240 ---------------~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~D~a~a~~~~~~~~~~~---g~~~i~~~~~~s~  296 (363)
                                     ...++.+  +...++++   +++++.++|+||+|+|++++.++++....   .+||+++ +.+++
T Consensus       268 ~~~~li~~~~~~~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~~~g~~~i~Nigs-~~~si  346 (442)
T PLN02572        268 MDEELINRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPAKPGEFRVFNQFT-EQFSV  346 (442)
T ss_pred             cccccccccCcccchhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChhhcCceeEEEeCC-CceeH
Confidence                           1233322  44456654   78899999999999999999999865322   3799976 67999


Q ss_pred             HHHHHHHHHH---hCCCCCC-CCcHHHHHHHhccCceeeecCcccChhhHHHcCCCccc---ccHHHHHHHHh
Q 017977          297 AEMCDHLGNV---LGRPSWL-PVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKY---RYVKDALKAIM  362 (363)
Q Consensus       297 ~el~~~i~~~---~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~p~~---~~~~~~l~~~~  362 (363)
                      .|+++.+.+.   +|.+..+ ..|..        ...........|++|+++|||+|++   + ++++|.+++
T Consensus       347 ~el~~~i~~~~~~~g~~~~~~~~p~~--------~~~~~~~~~~~d~~k~~~LGw~p~~~~~~-l~~~l~~~~  410 (442)
T PLN02572        347 NELAKLVTKAGEKLGLDVEVISVPNP--------RVEAEEHYYNAKHTKLCELGLEPHLLSDS-LLDSLLNFA  410 (442)
T ss_pred             HHHHHHHHHHHHhhCCCCCeeeCCCC--------cccccccccCccHHHHHHcCCCCCCcHHH-HHHHHHHHH
Confidence            9999999999   8865221 11110        0000112334568899889999998   5 777777765

>PLN02206 UDP-glucuronate decarboxylase

Probab=100.00  E-value=5e-37  Score=284.90  Aligned_cols=290  Identities=17%  Similarity=0.186  Sum_probs=203.7

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccc-cCCCCCccccCcccccCcchHHhhccCCCEEEEccCCC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL-IFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  127 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~~  127 (363)
                      ..|||||||||||||++|+++|+++|++|++++|....... ......   ..++++.+.|.+...+.++|+|||+|+..
T Consensus       118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~~---~~~~~~i~~D~~~~~l~~~D~ViHlAa~~  194 (442)
T PLN02206        118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHFS---NPNFELIRHDVVEPILLEVDQIYHLACPA  194 (442)
T ss_pred             CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhcc---CCceEEEECCccChhhcCCCEEEEeeeec
Confidence            45899999999999999999999999999999876432111 100000   12344555554555667899999999864


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC---CcccccccCCC-cchhhhhhhcccchhh
Q 017977          128 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM---RAAHQEMITWL-SDYCAKVYCLVSFNRG  203 (363)
Q Consensus       128 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg---~~~~~e~~~~~-~~~~~~~~~~~~y~~~  203 (363)
                      ... ....++...+++|+.++.+++++|++  .++ ++||+||. .+||   ..+.+|+.+.. .+..    ..+.|+.+
T Consensus       195 ~~~-~~~~~p~~~~~~Nv~gt~nLleaa~~--~g~-r~V~~SS~-~VYg~~~~~p~~E~~~~~~~P~~----~~s~Y~~S  265 (442)
T PLN02206        195 SPV-HYKFNPVKTIKTNVVGTLNMLGLAKR--VGA-RFLLTSTS-EVYGDPLQHPQVETYWGNVNPIG----VRSCYDEG  265 (442)
T ss_pred             chh-hhhcCHHHHHHHHHHHHHHHHHHHHH--hCC-EEEEECCh-HHhCCCCCCCCCccccccCCCCC----ccchHHHH
Confidence            322 22335678899999999999999999  665 79999999 8998   34556653211 0110    02346677


Q ss_pred             HHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCc-ccchHHHH--HHHhCCCC---CCCCCccccccHHHHHHHHHHHh
Q 017977          204 VLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA-LAKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIYEAL  277 (363)
Q Consensus       204 k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~-~~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~D~a~a~~~~~  277 (363)
                      |...++..... ....+++++++||+++|||+... ...++..+  +...++++   +++++.++|+|++|+|++++.++
T Consensus       266 K~~aE~~~~~y-~~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dva~ai~~a~  344 (442)
T PLN02206        266 KRTAETLTMDY-HRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLM  344 (442)
T ss_pred             HHHHHHHHHHH-HHHhCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHHHHHHHHHHH
Confidence            76555544433 33348999999999999997432 12333332  34455554   67888999999999999999998


Q ss_pred             cCCCCCceEEeeCCCCcCHHHHHHHHHHHhCCCCCCCC-cHHHHHHHhccCceeeecCcccChhhHHH-cCCCcccccHH
Q 017977          278 SNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPV-PEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYRYVK  355 (363)
Q Consensus       278 ~~~~~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lG~~p~~~~~~  355 (363)
                      ++. ..|+||+++++.+++.|+++.+.+.+|.+..+.. |..     ..+     .....++++|+++ |||+|+++ ++
T Consensus       345 e~~-~~g~yNIgs~~~~sl~Elae~i~~~~g~~~~i~~~p~~-----~~~-----~~~~~~d~sKa~~~LGw~P~~~-l~  412 (442)
T PLN02206        345 EGE-HVGPFNLGNPGEFTMLELAKVVQETIDPNAKIEFRPNT-----EDD-----PHKRKPDITKAKELLGWEPKVS-LR  412 (442)
T ss_pred             hcC-CCceEEEcCCCceeHHHHHHHHHHHhCCCCceeeCCCC-----CCC-----ccccccCHHHHHHHcCCCCCCC-HH
Confidence            765 4679999999999999999999999986532211 110     001     1234567899965 99999997 99


Q ss_pred             HHHHHHhC
Q 017977          356 DALKAIMS  363 (363)
Q Consensus       356 ~~l~~~~~  363 (363)
                      |+|+++++
T Consensus       413 egl~~~~~  420 (442)
T PLN02206        413 QGLPLMVK  420 (442)
T ss_pred             HHHHHHHH
Confidence            99998863

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=100.00  E-value=1.2e-36  Score=278.25  Aligned_cols=301  Identities=15%  Similarity=0.162  Sum_probs=206.5

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEE-eCCCCcc--cccCC--CCCccccCcccccCcchHHhhccC--CCEEEE
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVL-TRSRSKA--ELIFP--GKKTRFFPGVMIAEEPQWRDCIQG--STAVVN  122 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~--~~~~~--~~~~~~~~~~d~~~~~~~~~~~~~--~d~Vi~  122 (363)
                      ||+|||||||||||++|++.|+++|++|+++ +|.....  ..+..  ......+..+|+.|.+++.+++++  +|+|||
T Consensus         1 ~~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih   80 (355)
T PRK10217          1 MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMH   80 (355)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEEEE
Confidence            4689999999999999999999999875544 4432211  11111  111122446799999999998884  899999


Q ss_pred             ccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhC-------CCCCCCeEEEeccceecCC-----cccccccCCCcch
Q 017977          123 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES-------PEGVRPSVLELVKPKYLMR-----AAHQEMITWLSDY  190 (363)
Q Consensus       123 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-------~~~~~~~v~~SS~~~~yg~-----~~~~e~~~~~~~~  190 (363)
                      +|+... ...+...+..++++|+.++.+++++|.+.       ..+++++|++||. ++||.     .+++|+.+..+  
T Consensus        81 ~A~~~~-~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~-~vyg~~~~~~~~~~E~~~~~p--  156 (355)
T PRK10217         81 LAAESH-VDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTD-EVYGDLHSTDDFFTETTPYAP--  156 (355)
T ss_pred             CCcccC-cchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecch-hhcCCCCCCCCCcCCCCCCCC--
Confidence            999742 22233456789999999999999999762       1246789999998 88982     24666654321  


Q ss_pred             hhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHH--HHHhCCCC---CCCCCcccccc
Q 017977          191 CAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL---GSGQQWFSWIH  265 (363)
Q Consensus       191 ~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~i~  265 (363)
                            .+.|+.+|+..+........ ..+++++++||+++|||+... ..+++.+  ....+.++   +++++.++|+|
T Consensus       157 ------~s~Y~~sK~~~e~~~~~~~~-~~~~~~~i~r~~~v~Gp~~~~-~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~  228 (355)
T PRK10217        157 ------SSPYSASKASSDHLVRAWLR-TYGLPTLITNCSNNYGPYHFP-EKLIPLMILNALAGKPLPVYGNGQQIRDWLY  228 (355)
T ss_pred             ------CChhHHHHHHHHHHHHHHHH-HhCCCeEEEeeeeeeCCCCCc-ccHHHHHHHHHhcCCCceEeCCCCeeeCcCc
Confidence                  12356666555444444333 348999999999999998632 2333333  34445543   78889999999


Q ss_pred             HHHHHHHHHHHhcCCCCCceEEeeCCCCcCHHHHHHHHHHHhCCCC-CCCCcHHHHHHHhc--cCceeeecCcccChhhH
Q 017977          266 LDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPS-WLPVPEFALKAVLG--EGAFVVLEGQRVVPARA  342 (363)
Q Consensus       266 v~D~a~a~~~~~~~~~~~g~~~i~~~~~~s~~el~~~i~~~~g~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~k~  342 (363)
                      ++|+|++++.+++....+++||++++++++++|+++.+.+.+|+.. ..+.+.........  ...........++++|+
T Consensus       229 v~D~a~a~~~~~~~~~~~~~yni~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~  308 (355)
T PRK10217        229 VEDHARALYCVATTGKVGETYNIGGHNERKNLDVVETICELLEELAPNKPQGVAHYRDLITFVADRPGHDLRYAIDASKI  308 (355)
T ss_pred             HHHHHHHHHHHHhcCCCCCeEEeCCCCcccHHHHHHHHHHHhcccccccccccccccccceecCCCCCCCcccccCHHHH
Confidence            9999999999998765567999999999999999999999998642 11211110000000  00000112245689999


Q ss_pred             H-HcCCCcccccHHHHHHHHhC
Q 017977          343 K-ELGFPFKYRYVKDALKAIMS  363 (363)
Q Consensus       343 ~-~lG~~p~~~~~~~~l~~~~~  363 (363)
                      + +|||+|+++ ++|+|+++++
T Consensus       309 ~~~lg~~p~~~-l~e~l~~~~~  329 (355)
T PRK10217        309 ARELGWLPQET-FESGMRKTVQ  329 (355)
T ss_pred             HHhcCCCCcCc-HHHHHHHHHH
Confidence            6 599999997 9999999863

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=1.3e-35  Score=268.28  Aligned_cols=298  Identities=14%  Similarity=0.120  Sum_probs=207.6

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCccccc---CC---CCCccccCcccccCcchHHhhccCCCEEEEc
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI---FP---GKKTRFFPGVMIAEEPQWRDCIQGSTAVVNL  123 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~---~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~  123 (363)
                      +|+||||||+||||++|++.|+++|++|++++|+.......   ..   ......+..+|+.|.+++.++++++|+|||+
T Consensus         5 ~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih~   84 (325)
T PLN02989          5 GKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVFHT   84 (325)
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEEEe
Confidence            47999999999999999999999999999999887543211   00   0011224457999999999999999999999


Q ss_pred             cCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCC-------cccccccCCCcchhhhhhh
Q 017977          124 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMR-------AAHQEMITWLSDYCAKVYC  196 (363)
Q Consensus       124 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~-------~~~~e~~~~~~~~~~~~~~  196 (363)
                      |+... ...........+++|+.++.++++++.+. .+.+++|++||.+.+++.       .+++|+.+..+....  ..
T Consensus        85 A~~~~-~~~~~~~~~~~~~~n~~g~~~ll~a~~~~-~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~--~~  160 (325)
T PLN02989         85 ASPVA-ITVKTDPQVELINPAVNGTINVLRTCTKV-SSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAE--ER  160 (325)
T ss_pred             CCCCC-CCCCCChHHHHHHHHHHHHHHHHHHHHHc-CCceEEEEecchhheecCCccCCCCCccCcCCCCchhHhc--cc
Confidence            99642 22334456788999999999999999873 246789999998433431       235666554332110  11


Q ss_pred             cccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchH-HHH-HHHhCCCCCCCCCccccccHHHHHHHHH
Q 017977          197 LVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMI-PLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIY  274 (363)
Q Consensus       197 ~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~i~v~D~a~a~~  274 (363)
                      .+.|+.+|+..+........ ..+++++++||+++|||.......+. ..+ ....++.+. +.+.++|+|++|+|++++
T Consensus       161 ~~~Y~~sK~~~E~~~~~~~~-~~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~~-~~~~r~~i~v~Dva~a~~  238 (325)
T PLN02989        161 KQWYVLSKTLAEDAAWRFAK-DNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPF-NTTHHRFVDVRDVALAHV  238 (325)
T ss_pred             ccchHHHHHHHHHHHHHHHH-HcCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCCC-CCcCcCeeEHHHHHHHHH
Confidence            24477777655555554433 34899999999999999764322222 222 334444332 234578999999999999


Q ss_pred             HHhcCCCCCceEEeeCCCCcCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhccCceeeecCcccChhhHHHcCCCcccccH
Q 017977          275 EALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYV  354 (363)
Q Consensus       275 ~~~~~~~~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~p~~~~~  354 (363)
                      .+++++...|+||++ +..++++|+++.+.+.++... +..+       ..+...........+++|+++|||.|+++ +
T Consensus       239 ~~l~~~~~~~~~ni~-~~~~s~~ei~~~i~~~~~~~~-~~~~-------~~~~~~~~~~~~~~~~~k~~~lg~~p~~~-l  308 (325)
T PLN02989        239 KALETPSANGRYIID-GPVVTIKDIENVLREFFPDLC-IADR-------NEDITELNSVTFNVCLDKVKSLGIIEFTP-T  308 (325)
T ss_pred             HHhcCcccCceEEEe-cCCCCHHHHHHHHHHHCCCCC-CCCC-------CCCcccccccCcCCCHHHHHHcCCCCCCC-H
Confidence            999876656799995 458999999999999997421 1100       00111001123456789998899999998 9


Q ss_pred             HHHHHHHhC
Q 017977          355 KDALKAIMS  363 (363)
Q Consensus       355 ~~~l~~~~~  363 (363)
                      +|+|+++++
T Consensus       309 ~~gi~~~~~  317 (325)
T PLN02989        309 ETSLRDTVL  317 (325)
T ss_pred             HHHHHHHHH
Confidence            999999874

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=100.00  E-value=2.6e-36  Score=276.03  Aligned_cols=289  Identities=18%  Similarity=0.169  Sum_probs=204.2

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCCCC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPI  128 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~~~  128 (363)
                      ..|+|||||||||||++|+++|+++||+|++++|...........  ...+...|+.|.+.+..++.++|+|||+|+...
T Consensus        20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~~~~--~~~~~~~Dl~d~~~~~~~~~~~D~Vih~Aa~~~   97 (370)
T PLN02695         20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSEDMF--CHEFHLVDLRVMENCLKVTKGVDHVFNLAADMG   97 (370)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccccccccc--cceEEECCCCCHHHHHHHHhCCCEEEEcccccC
Confidence            457999999999999999999999999999999865321111000  011445688888888888889999999998643


Q ss_pred             CCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCc-------ccccccC-CCcchhhhhhhcccc
Q 017977          129 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRA-------AHQEMIT-WLSDYCAKVYCLVSF  200 (363)
Q Consensus       129 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~-------~~~e~~~-~~~~~~~~~~~~~~y  200 (363)
                      .......++...+..|+.++.+++++|++  .++++|||+||. ++||..       ++.|+.+ +..+       .+.|
T Consensus        98 ~~~~~~~~~~~~~~~N~~~t~nll~aa~~--~~vk~~V~~SS~-~vYg~~~~~~~~~~~~E~~~~p~~p-------~s~Y  167 (370)
T PLN02695         98 GMGFIQSNHSVIMYNNTMISFNMLEAARI--NGVKRFFYASSA-CIYPEFKQLETNVSLKESDAWPAEP-------QDAY  167 (370)
T ss_pred             CccccccCchhhHHHHHHHHHHHHHHHHH--hCCCEEEEeCch-hhcCCccccCcCCCcCcccCCCCCC-------CCHH
Confidence            22222223455677899999999999999  789999999999 899821       2444331 1111       1236


Q ss_pred             hhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCccc---chHHHH--HHHh-CCCC---CCCCCccccccHHHHHH
Q 017977          201 NRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALA---KMIPLF--MMFA-GGPL---GSGQQWFSWIHLDDIVN  271 (363)
Q Consensus       201 ~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~---~~~~~~--~~~~-~~~~---~~~~~~~~~i~v~D~a~  271 (363)
                      +.+|...+.+..... ...+++++++||+++|||++....   .+.+.+  .... +.++   +++++.++|+|++|+++
T Consensus       168 g~sK~~~E~~~~~~~-~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~D~a~  246 (370)
T PLN02695        168 GLEKLATEELCKHYT-KDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDECVE  246 (370)
T ss_pred             HHHHHHHHHHHHHHH-HHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeHHHHHH
Confidence            666655555544433 334999999999999999653211   112222  2222 2343   77889999999999999


Q ss_pred             HHHHHhcCCCCCceEEeeCCCCcCHHHHHHHHHHHhCCCCCCC-CcHHHHHHHhccCceeeecCcccChhhHHH-cCCCc
Q 017977          272 LIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLP-VPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPF  349 (363)
Q Consensus       272 a~~~~~~~~~~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lG~~p  349 (363)
                      +++.++++. ..++||+++++.++++|+++.+.+..|.+..+. .|..     .+      ......+++|+++ |||+|
T Consensus       247 ai~~~~~~~-~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~i~~~~~~-----~~------~~~~~~d~sk~~~~lgw~p  314 (370)
T PLN02695        247 GVLRLTKSD-FREPVNIGSDEMVSMNEMAEIALSFENKKLPIKHIPGP-----EG------VRGRNSDNTLIKEKLGWAP  314 (370)
T ss_pred             HHHHHHhcc-CCCceEecCCCceeHHHHHHHHHHHhCCCCCceecCCC-----CC------ccccccCHHHHHHhcCCCC
Confidence            999988764 457999999999999999999999998753221 1100     00      0123468999975 89999


Q ss_pred             ccccHHHHHHHHhC
Q 017977          350 KYRYVKDALKAIMS  363 (363)
Q Consensus       350 ~~~~~~~~l~~~~~  363 (363)
                      +++ ++++|+++++
T Consensus       315 ~~~-l~e~i~~~~~  327 (370)
T PLN02695        315 TMR-LKDGLRITYF  327 (370)
T ss_pred             CCC-HHHHHHHHHH
Confidence            987 9999999863

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=100.00  E-value=5.5e-36  Score=292.84  Aligned_cols=309  Identities=16%  Similarity=0.180  Sum_probs=215.2

Q ss_pred             CCCCCccEEEEecCcchHHHHHHHHHHhC-CCEEEEEeCCCCcccccCCCCCccccCcccccCcch-HHhhccCCCEEEE
Q 017977           45 TQKASQMTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQ-WRDCIQGSTAVVN  122 (363)
Q Consensus        45 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~d~Vi~  122 (363)
                      .+...+|+|||||||||||++|+++|+++ ||+|++++|............ ...+..+|+.|.+. +.++++++|+|||
T Consensus       310 ~~~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~~~~-~~~~~~gDl~d~~~~l~~~l~~~D~ViH  388 (660)
T PRK08125        310 CSAKRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFLGHP-RFHFVEGDISIHSEWIEYHIKKCDVVLP  388 (660)
T ss_pred             hhhhcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhcCCC-ceEEEeccccCcHHHHHHHhcCCCEEEE
Confidence            35566789999999999999999999986 799999999775432222111 11244578888655 5677889999999


Q ss_pred             ccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC---CcccccccCCCcchhhhhhhccc
Q 017977          123 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM---RAAHQEMITWLSDYCAKVYCLVS  199 (363)
Q Consensus       123 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg---~~~~~e~~~~~~~~~~~~~~~~~  199 (363)
                      +|+..... ....++...+++|+.++.+++++|.+  .+ +++||+||. .+||   ..+++|+.+..+. .......+.
T Consensus       389 lAa~~~~~-~~~~~~~~~~~~Nv~~t~~ll~a~~~--~~-~~~V~~SS~-~vyg~~~~~~~~E~~~~~~~-~p~~~p~s~  462 (660)
T PRK08125        389 LVAIATPI-EYTRNPLRVFELDFEENLKIIRYCVK--YN-KRIIFPSTS-EVYGMCTDKYFDEDTSNLIV-GPINKQRWI  462 (660)
T ss_pred             CccccCch-hhccCHHHHHHhhHHHHHHHHHHHHh--cC-CeEEEEcch-hhcCCCCCCCcCcccccccc-CCCCCCccc
Confidence            99974332 22344667889999999999999999  56 789999999 8999   3456776543110 000001234


Q ss_pred             chhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc-------cchHHHH--HHHhCCCC---CCCCCccccccHH
Q 017977          200 FNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL-------AKMIPLF--MMFAGGPL---GSGQQWFSWIHLD  267 (363)
Q Consensus       200 y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~-------~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~  267 (363)
                      |+.+|...+.+...... .++++++++||+++|||+....       ...++.+  ....++++   +++.+.++|+|++
T Consensus       463 Yg~sK~~~E~~~~~~~~-~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i~v~  541 (660)
T PRK08125        463 YSVSKQLLDRVIWAYGE-KEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTDIR  541 (660)
T ss_pred             hHHHHHHHHHHHHHHHH-hcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeeceeeHH
Confidence            77778666666554433 3489999999999999975321       1333333  44445554   6788999999999


Q ss_pred             HHHHHHHHHhcCCC---CCceEEeeCCC-CcCHHHHHHHHHHHhCCCC-CCCCcHHH-HHHH-----hccCceeeecCcc
Q 017977          268 DIVNLIYEALSNPS---YRGVINGTAPN-PVRLAEMCDHLGNVLGRPS-WLPVPEFA-LKAV-----LGEGAFVVLEGQR  336 (363)
Q Consensus       268 D~a~a~~~~~~~~~---~~g~~~i~~~~-~~s~~el~~~i~~~~g~~~-~~~~~~~~-~~~~-----~~~~~~~~~~~~~  336 (363)
                      |+|++++.++++..   .+++||+++++ .++++|+++.+.+.+|.+. ...+|.+. ....     .+.. ........
T Consensus       542 Dva~a~~~~l~~~~~~~~g~iyni~~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  620 (660)
T PRK08125        542 DGIEALFRIIENKDNRCDGQIINIGNPDNEASIRELAEMLLASFEKHPLRDHFPPFAGFRVVESSSYYGKG-YQDVEHRK  620 (660)
T ss_pred             HHHHHHHHHHhccccccCCeEEEcCCCCCceeHHHHHHHHHHHhccCcccccCCccccccccccccccccc-cccccccC
Confidence            99999999998653   24589999985 7999999999999999642 12222211 0000     0000 00112334


Q ss_pred             cChhhHHH-cCCCcccccHHHHHHHHhC
Q 017977          337 VVPARAKE-LGFPFKYRYVKDALKAIMS  363 (363)
Q Consensus       337 ~~~~k~~~-lG~~p~~~~~~~~l~~~~~  363 (363)
                      .+++|+++ |||+|+++ ++|+|+++++
T Consensus       621 ~d~~ka~~~LGw~P~~~-lee~l~~~i~  647 (660)
T PRK08125        621 PSIRNARRLLDWEPKID-MQETIDETLD  647 (660)
T ss_pred             CChHHHHHHhCCCCCCc-HHHHHHHHHH
Confidence            67899975 89999997 9999999863

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=100.00  E-value=5.3e-36  Score=272.49  Aligned_cols=298  Identities=15%  Similarity=0.083  Sum_probs=205.2

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcc-----cccCCC-----CCccccCcccccCcchHHhhccC--CC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-----ELIFPG-----KKTRFFPGVMIAEEPQWRDCIQG--ST  118 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~~--~d  118 (363)
                      |+||||||+||||++|+++|+++|++|++++|++...     ..+...     .....+..+|+.|.+.+.+++++  +|
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d   80 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKPT   80 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCCC
Confidence            4899999999999999999999999999999986421     111000     01122456899999999999885  69


Q ss_pred             EEEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCC---CCeEEEeccceecC---CcccccccCCCcchhh
Q 017977          119 AVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGV---RPSVLELVKPKYLM---RAAHQEMITWLSDYCA  192 (363)
Q Consensus       119 ~Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~~~v~~SS~~~~yg---~~~~~e~~~~~~~~~~  192 (363)
                      +|||+|+.... ......+...+++|+.++.+++++|.+  .++   +++||+||. ++||   ..+++|+.+..+    
T Consensus        81 ~ViH~Aa~~~~-~~~~~~~~~~~~~n~~gt~~ll~a~~~--~~~~~~~~~v~~SS~-~vyg~~~~~~~~E~~~~~p----  152 (343)
T TIGR01472        81 EIYNLAAQSHV-KVSFEIPEYTADVDGIGTLRLLEAVRT--LGLIKSVKFYQASTS-ELYGKVQEIPQNETTPFYP----  152 (343)
T ss_pred             EEEECCccccc-chhhhChHHHHHHHHHHHHHHHHHHHH--hCCCcCeeEEEeccH-HhhCCCCCCCCCCCCCCCC----
Confidence            99999997432 223334567788999999999999998  554   379999999 8999   335666655321    


Q ss_pred             hhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCc--ccchHHH-H-HHHhCCC----CCCCCCccccc
Q 017977          193 KVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA--LAKMIPL-F-MMFAGGP----LGSGQQWFSWI  264 (363)
Q Consensus       193 ~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~--~~~~~~~-~-~~~~~~~----~~~~~~~~~~i  264 (363)
                          .+.|+.+|...+... ..+....++++++.|+.++|||..+.  ....+.. + ....+++    ++++++.++|+
T Consensus       153 ----~~~Y~~sK~~~e~~~-~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i  227 (343)
T TIGR01472       153 ----RSPYAAAKLYAHWIT-VNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWG  227 (343)
T ss_pred             ----CChhHHHHHHHHHHH-HHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccCce
Confidence                122555565444443 33333358899999999999986432  1222222 2 2333432    27788999999


Q ss_pred             cHHHHHHHHHHHhcCCCCCceEEeeCCCCcCHHHHHHHHHHHhCCCCCC---CCc-----HHHH--HHHhccC--ceeee
Q 017977          265 HLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWL---PVP-----EFAL--KAVLGEG--AFVVL  332 (363)
Q Consensus       265 ~v~D~a~a~~~~~~~~~~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~~---~~~-----~~~~--~~~~~~~--~~~~~  332 (363)
                      |++|+|++++.+++++. .+.||+++++++|++|+++.+.+.+|++...   ++.     .+..  ...+...  .....
T Consensus       228 ~V~D~a~a~~~~~~~~~-~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (343)
T TIGR01472       228 HAKDYVEAMWLMLQQDK-PDDYVIATGETHSVREFVEVSFEYIGKTLNWKDKGINEVGRCKETGKVHVEIDPRYFRPTEV  306 (343)
T ss_pred             eHHHHHHHHHHHHhcCC-CccEEecCCCceeHHHHHHHHHHHcCCCcccccccccccccccccCceeEEeCccccCCCcc
Confidence            99999999999997654 4799999999999999999999999965210   000     0000  0000000  00011


Q ss_pred             cCcccChhhHH-HcCCCcccccHHHHHHHHhC
Q 017977          333 EGQRVVPARAK-ELGFPFKYRYVKDALKAIMS  363 (363)
Q Consensus       333 ~~~~~~~~k~~-~lG~~p~~~~~~~~l~~~~~  363 (363)
                      .....+++|++ +|||+|+++ ++|+|+++++
T Consensus       307 ~~~~~d~~k~~~~lgw~p~~~-l~egi~~~~~  337 (343)
T TIGR01472       307 DLLLGDATKAKEKLGWKPEVS-FEKLVKEMVE  337 (343)
T ss_pred             chhcCCHHHHHHhhCCCCCCC-HHHHHHHHHH
Confidence            12234789996 489999997 9999999874

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=2.7e-35  Score=265.88  Aligned_cols=293  Identities=17%  Similarity=0.194  Sum_probs=204.6

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccc---cC---CCCCccccCcccccCcchHHhhccCCCEEEEc
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL---IF---PGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNL  123 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~---~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~  123 (363)
                      .|+|||||||||||++|+++|+++|++|++++|+......   +.   .......+..+|+.|.+.+..+++++|+|||+
T Consensus         4 ~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~   83 (322)
T PLN02662          4 GKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVFHT   83 (322)
T ss_pred             CCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEEEe
Confidence            4689999999999999999999999999999998654211   10   00111224557999999999999999999999


Q ss_pred             cCCCCCCCCChhhH-HHHHHHHHHHHHHHHHHHHhCCC-CCCCeEEEeccce-ecCC------cccccccCCCcchhhhh
Q 017977          124 AGTPIGTRWSSEIK-KEIKESRIRVTSKVVDLINESPE-GVRPSVLELVKPK-YLMR------AAHQEMITWLSDYCAKV  194 (363)
Q Consensus       124 a~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~~-~~~~~v~~SS~~~-~yg~------~~~~e~~~~~~~~~~~~  194 (363)
                      |+....   ....+ ..++++|+.++.++++++.+  . +++++||+||.+. +|+.      .+++|+.+..+.+... 
T Consensus        84 A~~~~~---~~~~~~~~~~~~nv~gt~~ll~a~~~--~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~~~-  157 (322)
T PLN02662         84 ASPFYH---DVTDPQAELIDPAVKGTLNVLRSCAK--VPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEE-  157 (322)
T ss_pred             CCcccC---CCCChHHHHHHHHHHHHHHHHHHHHh--CCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHhhc-
Confidence            986421   11223 47889999999999999988  5 7889999999842 5752      2356655433322211 


Q ss_pred             hhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchH-HHH-HHHhCCCCCCCCCccccccHHHHHHH
Q 017977          195 YCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMI-PLF-MMFAGGPLGSGQQWFSWIHLDDIVNL  272 (363)
Q Consensus       195 ~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~i~v~D~a~a  272 (363)
                       ..+.|+.+|+..++...... ...+++++++||+++|||......... ..+ ....+.+. .+++.++|||++|+|++
T Consensus       158 -~~~~Y~~sK~~~E~~~~~~~-~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~Dva~a  234 (322)
T PLN02662        158 -SKLWYVLSKTLAEEAAWKFA-KENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQT-FPNASYRWVDVRDVANA  234 (322)
T ss_pred             -ccchHHHHHHHHHHHHHHHH-HHcCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCcc-CCCCCcCeEEHHHHHHH
Confidence             11347777865555544433 334899999999999999753221111 112 33344332 34567899999999999


Q ss_pred             HHHHhcCCCCCceEEeeCCCCcCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhccCceeeecCcccChhhHHHcCCCcccc
Q 017977          273 IYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYR  352 (363)
Q Consensus       273 ~~~~~~~~~~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~p~~~  352 (363)
                      ++.+++++...|.||+++ ++++++|+++.+.+.++..   +.|.+..    .  .........++++|+++|||+|. +
T Consensus       235 ~~~~~~~~~~~~~~~~~g-~~~s~~e~~~~i~~~~~~~---~~~~~~~----~--~~~~~~~~~~d~~k~~~lg~~~~-~  303 (322)
T PLN02662        235 HIQAFEIPSASGRYCLVE-RVVHYSEVVKILHELYPTL---QLPEKCA----D--DKPYVPTYQVSKEKAKSLGIEFI-P  303 (322)
T ss_pred             HHHHhcCcCcCCcEEEeC-CCCCHHHHHHHHHHHCCCC---CCCCCCC----C--ccccccccccChHHHHHhCCccc-c
Confidence            999998776667899974 7799999999999998742   1121100    0  00112345688999988999974 5


Q ss_pred             cHHHHHHHHhC
Q 017977          353 YVKDALKAIMS  363 (363)
Q Consensus       353 ~~~~~l~~~~~  363 (363)
                       ++++|+++++
T Consensus       304 -~~~~l~~~~~  313 (322)
T PLN02662        304 -LEVSLKDTVE  313 (322)
T ss_pred             -HHHHHHHHHH
Confidence             9999999864

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=1.9e-35  Score=266.69  Aligned_cols=295  Identities=17%  Similarity=0.215  Sum_probs=203.0

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccc---cCC---CCCccccCcccccCcchHHhhccCCCEEEEc
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL---IFP---GKKTRFFPGVMIAEEPQWRDCIQGSTAVVNL  123 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~~---~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~  123 (363)
                      +++||||||+||||++++++|+++|++|+++.|+......   +..   ......+..+|+.+.+.+.++++++|+|||+
T Consensus         5 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   84 (322)
T PLN02986          5 GKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVFHT   84 (322)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEEEe
Confidence            4699999999999999999999999999999998764321   110   0111224557999999999999999999999


Q ss_pred             cCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccce-ecCC------cccccccCCCcchhhhhhh
Q 017977          124 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPK-YLMR------AAHQEMITWLSDYCAKVYC  196 (363)
Q Consensus       124 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~-~yg~------~~~~e~~~~~~~~~~~~~~  196 (363)
                      |+.....  ..+....+++.|+.++.++++++.+. .+++++|++||.+. .|+.      .+++|+.+..+.+..  ..
T Consensus        85 A~~~~~~--~~~~~~~~~~~nv~gt~~ll~~~~~~-~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~--~~  159 (322)
T PLN02986         85 ASPVFFT--VKDPQTELIDPALKGTINVLNTCKET-PSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCR--ET  159 (322)
T ss_pred             CCCcCCC--CCCchhhhhHHHHHHHHHHHHHHHhc-CCccEEEEecchhheecCCccCCCCCCcCcccCCChHHhh--cc
Confidence            9863211  11223457899999999999999872 26889999999843 3442      235565543322211  12


Q ss_pred             cccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccc-hHHHH-HHHhCCCCCCCCCccccccHHHHHHHHH
Q 017977          197 LVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAK-MIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIY  274 (363)
Q Consensus       197 ~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~a~~  274 (363)
                      .+.|+.+|...+........ .++++++++||+++|||....... ....+ ....+.++ .+.+.+++||++|+|++++
T Consensus       160 ~~~Y~~sK~~aE~~~~~~~~-~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~v~v~Dva~a~~  237 (322)
T PLN02986        160 KNWYPLSKILAENAAWEFAK-DNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNL-FNNRFYRFVDVRDVALAHI  237 (322)
T ss_pred             ccchHHHHHHHHHHHHHHHH-HhCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCC-CCCcCcceeEHHHHHHHHH
Confidence            24577778655554444333 348999999999999996532111 11112 33344443 2355689999999999999


Q ss_pred             HHhcCCCCCceEEeeCCCCcCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhccCceeeecCcccChhhHHHcCCCcccccH
Q 017977          275 EALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYV  354 (363)
Q Consensus       275 ~~~~~~~~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~p~~~~~  354 (363)
                      .+++++..+++||++ ++.++++|+++.+.+.++.. .++..     ...++.   ......++++|+++|||+|+ + +
T Consensus       238 ~al~~~~~~~~yni~-~~~~s~~e~~~~i~~~~~~~-~~~~~-----~~~~~~---~~~~~~~d~~~~~~lg~~~~-~-l  305 (322)
T PLN02986        238 KALETPSANGRYIID-GPIMSVNDIIDILRELFPDL-CIADT-----NEESEM---NEMICKVCVEKVKNLGVEFT-P-M  305 (322)
T ss_pred             HHhcCcccCCcEEEe-cCCCCHHHHHHHHHHHCCCC-CCCCC-----Cccccc---cccCCccCHHHHHHcCCccc-C-H
Confidence            999887766799995 46799999999999998731 11111     000110   01112467889988999997 4 9


Q ss_pred             HHHHHHHhC
Q 017977          355 KDALKAIMS  363 (363)
Q Consensus       355 ~~~l~~~~~  363 (363)
                      +|+|+++++
T Consensus       306 ~e~~~~~~~  314 (322)
T PLN02986        306 KSSLRDTIL  314 (322)
T ss_pred             HHHHHHHHH
Confidence            999999863

>PLN02650 dihydroflavonol-4-reductase

Probab=100.00  E-value=3.1e-35  Score=268.34  Aligned_cols=297  Identities=19%  Similarity=0.216  Sum_probs=199.9

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCccccc---CC---CCCccccCcccccCcchHHhhccCCCEEEEc
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI---FP---GKKTRFFPGVMIAEEPQWRDCIQGSTAVVNL  123 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~---~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~  123 (363)
                      .++||||||+||||++|+++|+++|++|++++|+.......   ..   ......+...|+.|.+.+.++++++|+|||+
T Consensus         5 ~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~ViH~   84 (351)
T PLN02650          5 KETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTGVFHV   84 (351)
T ss_pred             CCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCEEEEe
Confidence            46899999999999999999999999999999986543221   00   0001124467999999999999999999999


Q ss_pred             cCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCC-CCCeEEEeccceecC----Ccc-cccccCCCcchhhh-hhh
Q 017977          124 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEG-VRPSVLELVKPKYLM----RAA-HQEMITWLSDYCAK-VYC  196 (363)
Q Consensus       124 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~v~~SS~~~~yg----~~~-~~e~~~~~~~~~~~-~~~  196 (363)
                      |+....  .........+++|+.++.+++++|.+  .+ +++|||+||. ++|+    ..+ ++|+.+........ ...
T Consensus        85 A~~~~~--~~~~~~~~~~~~Nv~gt~~ll~aa~~--~~~~~r~v~~SS~-~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  159 (351)
T PLN02650         85 ATPMDF--ESKDPENEVIKPTVNGMLSIMKACAK--AKTVRRIVFTSSA-GTVNVEEHQKPVYDEDCWSDLDFCRRKKMT  159 (351)
T ss_pred             CCCCCC--CCCCchhhhhhHHHHHHHHHHHHHHh--cCCceEEEEecch-hhcccCCCCCCccCcccCCchhhhhccccc
Confidence            986321  11222347889999999999999998  55 6789999998 5554    122 45553211000000 001


Q ss_pred             cccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCc--ccchHHHHHHHhCCC-CCCCCCccccccHHHHHHHH
Q 017977          197 LVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA--LAKMIPLFMMFAGGP-LGSGQQWFSWIHLDDIVNLI  273 (363)
Q Consensus       197 ~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~i~v~D~a~a~  273 (363)
                      .+.|+.+|...+...... ...+|++++++||+++|||....  ...++..+....+.. .......++|+|++|+|+++
T Consensus       160 ~~~Y~~sK~~~E~~~~~~-~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~v~V~Dva~a~  238 (351)
T PLN02650        160 GWMYFVSKTLAEKAAWKY-AAENGLDFISIIPTLVVGPFISTSMPPSLITALSLITGNEAHYSIIKQGQFVHLDDLCNAH  238 (351)
T ss_pred             cchHHHHHHHHHHHHHHH-HHHcCCeEEEECCCceECCCCCCCCCccHHHHHHHhcCCccccCcCCCcceeeHHHHHHHH
Confidence            134777776555554443 33359999999999999997532  122222222222322 11122347999999999999


Q ss_pred             HHHhcCCCCCceEEeeCCCCcCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhccCceeeecCcccChhhHHHcCCCccccc
Q 017977          274 YEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRY  353 (363)
Q Consensus       274 ~~~~~~~~~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~p~~~~  353 (363)
                      +.+++++...+.| +++++.+++.|+++.+.+.++... ++..  .    .+  ..........+++|+++|||+|+++ 
T Consensus       239 ~~~l~~~~~~~~~-i~~~~~~s~~el~~~i~~~~~~~~-~~~~--~----~~--~~~~~~~~~~d~~k~~~lG~~p~~~-  307 (351)
T PLN02650        239 IFLFEHPAAEGRY-ICSSHDATIHDLAKMLREKYPEYN-IPAR--F----PG--IDEDLKSVEFSSKKLTDLGFTFKYS-  307 (351)
T ss_pred             HHHhcCcCcCceE-EecCCCcCHHHHHHHHHHhCcccC-CCCC--C----CC--cCcccccccCChHHHHHhCCCCCCC-
Confidence            9999876656788 566678999999999999886321 1111  0    00  0001123445788888899999997 


Q ss_pred             HHHHHHHHhC
Q 017977          354 VKDALKAIMS  363 (363)
Q Consensus       354 ~~~~l~~~~~  363 (363)
                      ++++|+++++
T Consensus       308 l~egl~~~i~  317 (351)
T PLN02650        308 LEDMFDGAIE  317 (351)
T ss_pred             HHHHHHHHHH
Confidence            9999999873

>PLN00198 anthocyanidin reductase; Provisional

Probab=100.00  E-value=5.6e-35  Score=265.35  Aligned_cols=298  Identities=14%  Similarity=0.158  Sum_probs=200.7

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCccccc-----CCCCCccccCcccccCcchHHhhccCCCEEEEc
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI-----FPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNL  123 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~  123 (363)
                      .+|+||||||+||||++|+++|+++|++|++++|+.......     ........+..+|+.|.+++.++++++|+|||+
T Consensus         8 ~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~   87 (338)
T PLN00198          8 GKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAGCDLVFHV   87 (338)
T ss_pred             CCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhcCCEEEEe
Confidence            357899999999999999999999999999999886542210     111111224567999999999999999999999


Q ss_pred             cCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCC-------cccccccCCCcchh-hhhh
Q 017977          124 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMR-------AAHQEMITWLSDYC-AKVY  195 (363)
Q Consensus       124 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~-------~~~~e~~~~~~~~~-~~~~  195 (363)
                      |+....  ........++++|+.++.++++++.+. .+++++||+||. ++|+.       .+++|+.+...... ....
T Consensus        88 A~~~~~--~~~~~~~~~~~~nv~g~~~ll~a~~~~-~~~~~~v~~SS~-~~~g~~~~~~~~~~~~E~~~~~~~~~~~~~~  163 (338)
T PLN00198         88 ATPVNF--ASEDPENDMIKPAIQGVHNVLKACAKA-KSVKRVILTSSA-AAVSINKLSGTGLVMNEKNWTDVEFLTSEKP  163 (338)
T ss_pred             CCCCcc--CCCChHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEeecc-eeeeccCCCCCCceeccccCCchhhhhhcCC
Confidence            985311  112223457899999999999999882 257899999998 77761       23455432110000 0011


Q ss_pred             hcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCc-ccchHHHH-HHHhCCCC---C-CCC----Ccccccc
Q 017977          196 CLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA-LAKMIPLF-MMFAGGPL---G-SGQ----QWFSWIH  265 (363)
Q Consensus       196 ~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~-~~~~~~~~-~~~~~~~~---~-~~~----~~~~~i~  265 (363)
                      ..+.|+.+|+..+....... ..++++++++||+++|||.... ....+..+ ....+.++   + .+.    ..++|+|
T Consensus       164 p~~~Y~~sK~~~E~~~~~~~-~~~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~  242 (338)
T PLN00198        164 PTWGYPASKTLAEKAAWKFA-EENNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEFLINGLKGMQMLSGSISITH  242 (338)
T ss_pred             ccchhHHHHHHHHHHHHHHH-HhcCceEEEEeCCceECCCccCCCCCcHHHHHHHHcCCccccccccccccccCCcceeE
Confidence            23347777765555544433 3358999999999999997531 22222222 33344432   2 122    2379999


Q ss_pred             HHHHHHHHHHHhcCCCCCceEEeeCCCCcCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhccCceeeecCcccChhhHHHc
Q 017977          266 LDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKEL  345 (363)
Q Consensus       266 v~D~a~a~~~~~~~~~~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~l  345 (363)
                      ++|+|++++.+++.....+.| ++++..+++.|+++.+.+.++... ++.  .     +++..  ......++++|++++
T Consensus       243 V~D~a~a~~~~~~~~~~~~~~-~~~~~~~s~~el~~~i~~~~~~~~-~~~--~-----~~~~~--~~~~~~~~~~k~~~~  311 (338)
T PLN00198        243 VEDVCRAHIFLAEKESASGRY-ICCAANTSVPELAKFLIKRYPQYQ-VPT--D-----FGDFP--SKAKLIISSEKLISE  311 (338)
T ss_pred             HHHHHHHHHHHhhCcCcCCcE-EEecCCCCHHHHHHHHHHHCCCCC-CCc--c-----ccccC--CCCccccChHHHHhC
Confidence            999999999999876555678 455677999999999999886421 111  0     01100  012344678999889


Q ss_pred             CCCcccccHHHHHHHHhC
Q 017977          346 GFPFKYRYVKDALKAIMS  363 (363)
Q Consensus       346 G~~p~~~~~~~~l~~~~~  363 (363)
                      ||+|+++ ++|+|+++++
T Consensus       312 G~~p~~~-l~~gi~~~~~  328 (338)
T PLN00198        312 GFSFEYG-IEEIYDQTVE  328 (338)
T ss_pred             CceecCc-HHHHHHHHHH
Confidence            9999998 9999999864

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=100.00  E-value=2.1e-35  Score=268.32  Aligned_cols=293  Identities=13%  Similarity=0.082  Sum_probs=206.4

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcc-----cccCC----CCCccccCcccccCcchHHhhccC--C
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-----ELIFP----GKKTRFFPGVMIAEEPQWRDCIQG--S  117 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~~~~~----~~~~~~~~~~d~~~~~~~~~~~~~--~  117 (363)
                      ++|+||||||+||||++|+++|+++|++|++++|+....     ..+..    ......+..+|+.|.+++.+++++  +
T Consensus         5 ~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   84 (340)
T PLN02653          5 PRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDIKP   84 (340)
T ss_pred             CCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHcCC
Confidence            457899999999999999999999999999999876431     11100    001122445799999999888874  6


Q ss_pred             CEEEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCC-----CeEEEeccceecC--CcccccccCCCcch
Q 017977          118 TAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVR-----PSVLELVKPKYLM--RAAHQEMITWLSDY  190 (363)
Q Consensus       118 d~Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~v~~SS~~~~yg--~~~~~e~~~~~~~~  190 (363)
                      |+|||+|+.... .....++...+++|+.++.++++++.+  .+++     ++|++||. ++||  ..+++|+.+..+. 
T Consensus        85 d~Vih~A~~~~~-~~~~~~~~~~~~~N~~gt~~ll~~~~~--~~~~~~~~~~~v~~Ss~-~vyg~~~~~~~E~~~~~p~-  159 (340)
T PLN02653         85 DEVYNLAAQSHV-AVSFEMPDYTADVVATGALRLLEAVRL--HGQETGRQIKYYQAGSS-EMYGSTPPPQSETTPFHPR-  159 (340)
T ss_pred             CEEEECCcccch-hhhhhChhHHHHHHHHHHHHHHHHHHH--hccccccceeEEEeccH-HHhCCCCCCCCCCCCCCCC-
Confidence            999999997422 223345677789999999999999998  5554     79999998 8999  3366776653221 


Q ss_pred             hhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCc--ccchHHHH--HHHhCCC--C--CCCCCccc
Q 017977          191 CAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA--LAKMIPLF--MMFAGGP--L--GSGQQWFS  262 (363)
Q Consensus       191 ~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~--~~~~~~~~--~~~~~~~--~--~~~~~~~~  262 (363)
                             +.|+.+|...+.... .+...+++.++..|+.++|||....  ....+..+  ....+.+  +  +++++.++
T Consensus       160 -------~~Y~~sK~~~e~~~~-~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd  231 (340)
T PLN02653        160 -------SPYAVAKVAAHWYTV-NYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDASRD  231 (340)
T ss_pred             -------ChhHHHHHHHHHHHH-HHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCcceec
Confidence                   225555654544443 3444458888999999999986432  12222222  2233432  2  77889999


Q ss_pred             cccHHHHHHHHHHHhcCCCCCceEEeeCCCCcCHHHHHHHHHHHhCCCC--CCCCcHHHHHHHhccCceeeecCcccChh
Q 017977          263 WIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPS--WLPVPEFALKAVLGEGAFVVLEGQRVVPA  340 (363)
Q Consensus       263 ~i~v~D~a~a~~~~~~~~~~~g~~~i~~~~~~s~~el~~~i~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  340 (363)
                      |+|++|+|++++.++++.. .+.||+++++++++.|+++.+.+..|.+.  .+.+...       ............+++
T Consensus       232 ~i~v~D~a~a~~~~~~~~~-~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~-------~~~~~~~~~~~~d~~  303 (340)
T PLN02653        232 WGFAGDYVEAMWLMLQQEK-PDDYVVATEESHTVEEFLEEAFGYVGLNWKDHVEIDPR-------YFRPAEVDNLKGDAS  303 (340)
T ss_pred             ceeHHHHHHHHHHHHhcCC-CCcEEecCCCceeHHHHHHHHHHHcCCCCCcceeeCcc-------cCCccccccccCCHH
Confidence            9999999999999998653 57999999999999999999999999641  1111100       000011123346899


Q ss_pred             hHHH-cCCCcccccHHHHHHHHhC
Q 017977          341 RAKE-LGFPFKYRYVKDALKAIMS  363 (363)
Q Consensus       341 k~~~-lG~~p~~~~~~~~l~~~~~  363 (363)
                      |+++ |||+|+++ ++|+|+++++
T Consensus       304 k~~~~lgw~p~~~-l~~gi~~~~~  326 (340)
T PLN02653        304 KAREVLGWKPKVG-FEQLVKMMVD  326 (340)
T ss_pred             HHHHHhCCCCCCC-HHHHHHHHHH
Confidence            9965 89999997 9999999874

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=100.00  E-value=1.3e-35  Score=270.54  Aligned_cols=293  Identities=16%  Similarity=0.097  Sum_probs=204.7

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCccccc---CCCCCccccCcccccCcchHHhhccC--CCEEEEcc
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI---FPGKKTRFFPGVMIAEEPQWRDCIQG--STAVVNLA  124 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~~~~~~~~~d~~~~~~~~~~~~~--~d~Vi~~a  124 (363)
                      +|+||||||+||||+++++.|+++|++|++++|+.......   ........+..+|+.|.+++.+++++  +|+|||+|
T Consensus         4 ~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih~A   83 (349)
T TIGR02622         4 GKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFHLA   83 (349)
T ss_pred             CCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEECC
Confidence            47999999999999999999999999999999987543221   11111112345799999999888875  69999999


Q ss_pred             CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCC-CCCeEEEeccceecCC----cccccccCCCcchhhhhhhccc
Q 017977          125 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEG-VRPSVLELVKPKYLMR----AAHQEMITWLSDYCAKVYCLVS  199 (363)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~v~~SS~~~~yg~----~~~~e~~~~~~~~~~~~~~~~~  199 (363)
                      +.+. ......++...+++|+.++.++++++.+  .+ ++++|++||. .+|+.    .+++|+.+..+        .+.
T Consensus        84 ~~~~-~~~~~~~~~~~~~~N~~g~~~ll~a~~~--~~~~~~iv~~SS~-~vyg~~~~~~~~~e~~~~~p--------~~~  151 (349)
T TIGR02622        84 AQPL-VRKSYADPLETFETNVMGTVNLLEAIRA--IGSVKAVVNVTSD-KCYRNDEWVWGYRETDPLGG--------HDP  151 (349)
T ss_pred             cccc-cccchhCHHHHHHHhHHHHHHHHHHHHh--cCCCCEEEEEech-hhhCCCCCCCCCccCCCCCC--------CCc
Confidence            9643 2334455678899999999999999987  55 6789999998 88982    24555544221        112


Q ss_pred             chhhHHHHHHHHHHHhcc---C---CCceEEEEeeceEEeCCCCcccchHHHH--HHHhCCCC--CCCCCccccccHHHH
Q 017977          200 FNRGVLVCREWEGTALKV---N---KDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL--GSGQQWFSWIHLDDI  269 (363)
Q Consensus       200 y~~~k~~~~~~~~~~~~~---~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~i~v~D~  269 (363)
                      |+.+|...+.........   .   .+++++++||+++|||++.....+++.+  ....++++  +++.+.++|+|++|+
T Consensus       152 Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~rd~i~v~D~  231 (349)
T TIGR02622       152 YSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVIIRNPDATRPWQHVLEP  231 (349)
T ss_pred             chhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEECCCCcccceeeHHHH
Confidence            444454444333322211   1   2899999999999999753333445444  33345443  778899999999999


Q ss_pred             HHHHHHHhcCC-----CCCceEEeeCC--CCcCHHHHHHHHHHHhCCC-CCCCCcHHHHHHHhccCceeeecCcccChhh
Q 017977          270 VNLIYEALSNP-----SYRGVINGTAP--NPVRLAEMCDHLGNVLGRP-SWLPVPEFALKAVLGEGAFVVLEGQRVVPAR  341 (363)
Q Consensus       270 a~a~~~~~~~~-----~~~g~~~i~~~--~~~s~~el~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k  341 (363)
                      |++++.+++..     ..+++||++++  ++++..|+++.+.+.++.. ..+..+..       ...........++++|
T Consensus       232 a~a~~~~~~~~~~~~~~~~~~yni~s~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~d~~k  304 (349)
T TIGR02622       232 LSGYLLLAEKLFTGQAEFAGAWNFGPRASDNARVVELVVDALEFWWGDDAEWEDDSD-------LNHPHEARLLKLDSSK  304 (349)
T ss_pred             HHHHHHHHHHHhhcCccccceeeeCCCcccCcCHHHHHHHHHHHhcCCCCceeeccC-------CCCCcccceeecCHHH
Confidence            99999887642     13569999974  6899999999999887642 11111100       0001111335568999


Q ss_pred             HHH-cCCCcccccHHHHHHHHh
Q 017977          342 AKE-LGFPFKYRYVKDALKAIM  362 (363)
Q Consensus       342 ~~~-lG~~p~~~~~~~~l~~~~  362 (363)
                      +++ |||+|+++ ++++|++++
T Consensus       305 ~~~~lgw~p~~~-l~~gi~~~i  325 (349)
T TIGR02622       305 ARTLLGWHPRWG-LEEAVSRTV  325 (349)
T ss_pred             HHHHhCCCCCCC-HHHHHHHHH
Confidence            975 89999997 999999876

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=100.00  E-value=4.2e-35  Score=262.86  Aligned_cols=280  Identities=14%  Similarity=0.146  Sum_probs=191.5

Q ss_pred             EEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCc---ch-HHhhc-----cCCCEEEEc
Q 017977           53 VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEE---PQ-WRDCI-----QGSTAVVNL  123 (363)
Q Consensus        53 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~---~~-~~~~~-----~~~d~Vi~~  123 (363)
                      ||||||+||||++|+++|+++|++++++.|+.........      ...+|+.|.   ++ +..++     .++|+|||+
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~------~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~Vih~   75 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVN------LVDLDIADYMDKEDFLAQIMAGDDFGDIEAIFHE   75 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHHHh------hhhhhhhhhhhHHHHHHHHhcccccCCccEEEEC
Confidence            8999999999999999999999987777665543211100      122444443   33 23333     268999999


Q ss_pred             cCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCC---cccccccCCCcchhhhhhhcccc
Q 017977          124 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMR---AAHQEMITWLSDYCAKVYCLVSF  200 (363)
Q Consensus       124 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~---~~~~e~~~~~~~~~~~~~~~~~y  200 (363)
                      |+......   .....+++.|+.++.+++++|++  .++ ++||+||. ++||.   .+.+|+.+..+.        +.|
T Consensus        76 A~~~~~~~---~~~~~~~~~n~~~t~~ll~~~~~--~~~-~~i~~SS~-~vyg~~~~~~~~E~~~~~p~--------~~Y  140 (308)
T PRK11150         76 GACSSTTE---WDGKYMMDNNYQYSKELLHYCLE--REI-PFLYASSA-ATYGGRTDDFIEEREYEKPL--------NVY  140 (308)
T ss_pred             ceecCCcC---CChHHHHHHHHHHHHHHHHHHHH--cCC-cEEEEcch-HHhCcCCCCCCccCCCCCCC--------CHH
Confidence            98643222   12456789999999999999999  676 59999999 89992   244554432211        226


Q ss_pred             hhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCc---ccchHHHH--HHHhCCCC----CCCCCccccccHHHHHH
Q 017977          201 NRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA---LAKMIPLF--MMFAGGPL----GSGQQWFSWIHLDDIVN  271 (363)
Q Consensus       201 ~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~---~~~~~~~~--~~~~~~~~----~~~~~~~~~i~v~D~a~  271 (363)
                      +.+|+..++........ .+++++++||+++|||+...   ...+...+  ...++.++    ++++..++++|++|+|+
T Consensus       141 ~~sK~~~E~~~~~~~~~-~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a~  219 (308)
T PRK11150        141 GYSKFLFDEYVRQILPE-ANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVAA  219 (308)
T ss_pred             HHHHHHHHHHHHHHHHH-cCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHHH
Confidence            66676656555444333 48999999999999997532   12222222  34445432    45566899999999999


Q ss_pred             HHHHHhcCCCCCceEEeeCCCCcCHHHHHHHHHHHhCCCC--CCCCcHHHHHHHhccCceeeecCcccChhhHHHcCCCc
Q 017977          272 LIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPS--WLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPF  349 (363)
Q Consensus       272 a~~~~~~~~~~~g~~~i~~~~~~s~~el~~~i~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~p  349 (363)
                      +++.+++.. .+++||+++++++++.|+++.+.+.+|...  ..+.|....    +    ........+++|++++||+|
T Consensus       220 a~~~~~~~~-~~~~yni~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~----~----~~~~~~~~d~~k~~~~g~~p  290 (308)
T PRK11150        220 VNLWFWENG-VSGIFNCGTGRAESFQAVADAVLAYHKKGEIEYIPFPDKLK----G----RYQAFTQADLTKLRAAGYDK  290 (308)
T ss_pred             HHHHHHhcC-CCCeEEcCCCCceeHHHHHHHHHHHhCCCcceeccCccccc----c----ccceecccCHHHHHhcCCCC
Confidence            999998764 357999999999999999999999998531  112222100    0    01122346799998899999


Q ss_pred             ccccHHHHHHHHhC
Q 017977          350 KYRYVKDALKAIMS  363 (363)
Q Consensus       350 ~~~~~~~~l~~~~~  363 (363)
                      ++.+++++|+++++
T Consensus       291 ~~~~~~~gl~~~~~  304 (308)
T PRK11150        291 PFKTVAEGVAEYMA  304 (308)
T ss_pred             CCCCHHHHHHHHHH
Confidence            86459999999874

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=100.00  E-value=2.8e-35  Score=268.96  Aligned_cols=297  Identities=14%  Similarity=0.144  Sum_probs=204.1

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCE-EEEEeCCCCc--ccccCC--CCCccccCcccccCcchHHhhcc--CCCEEEEc
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQ-VRVLTRSRSK--AELIFP--GKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNL  123 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~--~~~~~~--~~~~~~~~~~d~~~~~~~~~~~~--~~d~Vi~~  123 (363)
                      |||||||||||||++|+++|+++|++ |+++++....  ......  ......+..+|+.|.+++.++++  ++|+|||+
T Consensus         1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   80 (352)
T PRK10084          1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQHQPDAVMHL   80 (352)
T ss_pred             CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCCEEEEC
Confidence            58999999999999999999999975 6656654311  111110  01111244679999999998886  48999999


Q ss_pred             cCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhC-------CCCCCCeEEEeccceecCCc-------------ccccc
Q 017977          124 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES-------PEGVRPSVLELVKPKYLMRA-------------AHQEM  183 (363)
Q Consensus       124 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-------~~~~~~~v~~SS~~~~yg~~-------------~~~e~  183 (363)
                      |+.... ......++.++++|+.++.+++++|.+.       ..+++++|++||. ++||..             +++|+
T Consensus        81 A~~~~~-~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~-~vyg~~~~~~~~~~~~~~~~~~E~  158 (352)
T PRK10084         81 AAESHV-DRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTD-EVYGDLPHPDEVENSEELPLFTET  158 (352)
T ss_pred             CcccCC-cchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecch-hhcCCCCccccccccccCCCcccc
Confidence            997422 2223345789999999999999999862       0145689999998 888831             13343


Q ss_pred             cCCCcchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHH--HHHhCCCC---CCCC
Q 017977          184 ITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL---GSGQ  258 (363)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~--~~~~~~~~---~~~~  258 (363)
                      .+..+        .+.|+.+|+..+........ .++++++++||+.+|||.... ..+++.+  ....+.++   ++++
T Consensus       159 ~~~~p--------~~~Y~~sK~~~E~~~~~~~~-~~g~~~vilr~~~v~Gp~~~~-~~~~~~~~~~~~~~~~~~~~~~g~  228 (352)
T PRK10084        159 TAYAP--------SSPYSASKASSDHLVRAWLR-TYGLPTIVTNCSNNYGPYHFP-EKLIPLVILNALEGKPLPIYGKGD  228 (352)
T ss_pred             CCCCC--------CChhHHHHHHHHHHHHHHHH-HhCCCEEEEeccceeCCCcCc-cchHHHHHHHHhcCCCeEEeCCCC
Confidence            33211        13367777655555544333 358999999999999997532 2233332  33445442   6788


Q ss_pred             CccccccHHHHHHHHHHHhcCCCCCceEEeeCCCCcCHHHHHHHHHHHhCCCCCCCCcHHH-HHHHhccCceeeecCccc
Q 017977          259 QWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFA-LKAVLGEGAFVVLEGQRV  337 (363)
Q Consensus       259 ~~~~~i~v~D~a~a~~~~~~~~~~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  337 (363)
                      +.++++|++|+|+++..++++...+++||+++++++++.|+++.+.+.+|...+...+... ...... . ......+.+
T Consensus       229 ~~~~~v~v~D~a~a~~~~l~~~~~~~~yni~~~~~~s~~~~~~~i~~~~~~~~p~~~~~~~~~~~~~~-~-~~~~~~~~~  306 (352)
T PRK10084        229 QIRDWLYVEDHARALYKVVTEGKAGETYNIGGHNEKKNLDVVLTICDLLDEIVPKATSYREQITYVAD-R-PGHDRRYAI  306 (352)
T ss_pred             eEEeeEEHHHHHHHHHHHHhcCCCCceEEeCCCCcCcHHHHHHHHHHHhccccccccchhhhcccccc-C-CCCCceeee
Confidence            8999999999999999998875556799999999999999999999999864222111110 000000 0 001123457


Q ss_pred             ChhhHHH-cCCCcccccHHHHHHHHh
Q 017977          338 VPARAKE-LGFPFKYRYVKDALKAIM  362 (363)
Q Consensus       338 ~~~k~~~-lG~~p~~~~~~~~l~~~~  362 (363)
                      |++|+++ +||+|+++ ++++|++++
T Consensus       307 d~~k~~~~lg~~p~~~-l~~~l~~~~  331 (352)
T PRK10084        307 DASKISRELGWKPQET-FESGIRKTV  331 (352)
T ss_pred             CHHHHHHHcCCCCcCC-HHHHHHHHH
Confidence            8999975 99999997 999999876

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=100.00  E-value=2e-34  Score=259.40  Aligned_cols=287  Identities=21%  Similarity=0.281  Sum_probs=213.6

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCC-CEEEEccCCCCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGS-TAVVNLAGTPIG  129 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-d~Vi~~a~~~~~  129 (363)
                      |+|||||||||||++|+++|+++||+|++++|...+.......   ..+...|+.+.+...+..+++ |+|||+|+....
T Consensus         1 ~~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~---~~~~~~d~~~~~~~~~~~~~~~d~vih~aa~~~~   77 (314)
T COG0451           1 MRILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLLSG---VEFVVLDLTDRDLVDELAKGVPDAVIHLAAQSSV   77 (314)
T ss_pred             CeEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccccc---cceeeecccchHHHHHHHhcCCCEEEEccccCch
Confidence            3599999999999999999999999999999988776554311   125567888888888888888 999999998533


Q ss_pred             CCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCC----cccccc-cCCCcchhhhhhhcccchhhH
Q 017977          130 TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMR----AAHQEM-ITWLSDYCAKVYCLVSFNRGV  204 (363)
Q Consensus       130 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~----~~~~e~-~~~~~~~~~~~~~~~~y~~~k  204 (363)
                      ......++..++++|+.++.+++++|++  .+++++||.||. ++|+.    .+++|+ .+..+.-        .|+.+|
T Consensus        78 ~~~~~~~~~~~~~~nv~gt~~ll~aa~~--~~~~~~v~~ss~-~~~~~~~~~~~~~E~~~~~~p~~--------~Yg~sK  146 (314)
T COG0451          78 PDSNASDPAEFLDVNVDGTLNLLEAARA--AGVKRFVFASSV-SVVYGDPPPLPIDEDLGPPRPLN--------PYGVSK  146 (314)
T ss_pred             hhhhhhCHHHHHHHHHHHHHHHHHHHHH--cCCCeEEEeCCC-ceECCCCCCCCcccccCCCCCCC--------HHHHHH
Confidence            2211113456899999999999999999  899999997776 55552    266776 3332221        256667


Q ss_pred             HHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc-c-chHHH-H-HHHhCCC-C---CCCCCccccccHHHHHHHHHHH
Q 017977          205 LVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL-A-KMIPL-F-MMFAGGP-L---GSGQQWFSWIHLDDIVNLIYEA  276 (363)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~-~-~~~~~-~-~~~~~~~-~---~~~~~~~~~i~v~D~a~a~~~~  276 (363)
                      +..+++...... ..+++++++||+++|||+.... . .+... + ....+.+ +   +++...++++|++|++++++.+
T Consensus       147 ~~~E~~~~~~~~-~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  225 (314)
T COG0451         147 LAAEQLLRAYAR-LYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLA  225 (314)
T ss_pred             HHHHHHHHHHHH-HhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHHHHHH
Confidence            666666655555 4589999999999999976432 2 23332 2 3445554 2   4667778999999999999999


Q ss_pred             hcCCCCCceEEeeCCC-CcCHHHHHHHHHHHhCCCCCC-C-CcHHHHHHHhccCceeeecCcccChhhHH-HcCCCcccc
Q 017977          277 LSNPSYRGVINGTAPN-PVRLAEMCDHLGNVLGRPSWL-P-VPEFALKAVLGEGAFVVLEGQRVVPARAK-ELGFPFKYR  352 (363)
Q Consensus       277 ~~~~~~~g~~~i~~~~-~~s~~el~~~i~~~~g~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~lG~~p~~~  352 (363)
                      ++++... +||+++++ +.+++|+++.+.+.+|.+... . .+.        ...........+++.|++ .|||.|+++
T Consensus       226 ~~~~~~~-~~ni~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~lg~~p~~~  296 (314)
T COG0451         226 LENPDGG-VFNIGSGTAEITVRELAEAVAEAVGSKAPLIVYIPL--------GRRGDLREGKLLDISKARAALGWEPKVS  296 (314)
T ss_pred             HhCCCCc-EEEeCCCCCcEEHHHHHHHHHHHhCCCCcceeecCC--------CCCCcccccccCCHHHHHHHhCCCCCCC
Confidence            9987755 99999997 899999999999999987432 1 110        123333456677888886 699999976


Q ss_pred             cHHHHHHHHh
Q 017977          353 YVKDALKAIM  362 (363)
Q Consensus       353 ~~~~~l~~~~  362 (363)
                       +++++.+++
T Consensus       297 -~~~~i~~~~  305 (314)
T COG0451         297 -LEEGLADTL  305 (314)
T ss_pred             -HHHHHHHHH
Confidence             999999875

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=100.00  E-value=6.3e-35  Score=261.68  Aligned_cols=277  Identities=15%  Similarity=0.148  Sum_probs=198.5

Q ss_pred             EEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc--CCCEEEEccCCCCCCC
Q 017977           54 SVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGTPIGTR  131 (363)
Q Consensus        54 lVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~Vi~~a~~~~~~~  131 (363)
                      ||||||||||++|++.|++.|++|+++.+.                ..+|+.+.+++.++++  ++|+|||+|+......
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~----------------~~~Dl~~~~~l~~~~~~~~~d~Vih~A~~~~~~~   64 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH----------------KELDLTRQADVEAFFAKEKPTYVILAAAKVGGIH   64 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc----------------ccCCCCCHHHHHHHHhccCCCEEEEeeeeecccc
Confidence            699999999999999999999988866432                1368999999988877  4799999998742222


Q ss_pred             CChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC---CcccccccCCCcchhhhhhhcccchhhHHHHH
Q 017977          132 WSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM---RAAHQEMITWLSDYCAKVYCLVSFNRGVLVCR  208 (363)
Q Consensus       132 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg---~~~~~e~~~~~~~~~~~~~~~~~y~~~k~~~~  208 (363)
                      .....+..+++.|+.++.+++++|++  .+++++||+||+ .+||   ..+++|+++...+...   ....|+.+|...+
T Consensus        65 ~~~~~~~~~~~~n~~~~~~ll~~~~~--~~~~~~i~~SS~-~vyg~~~~~~~~E~~~~~~~~~p---~~~~Y~~sK~~~e  138 (306)
T PLN02725         65 ANMTYPADFIRENLQIQTNVIDAAYR--HGVKKLLFLGSS-CIYPKFAPQPIPETALLTGPPEP---TNEWYAIAKIAGI  138 (306)
T ss_pred             hhhhCcHHHHHHHhHHHHHHHHHHHH--cCCCeEEEeCce-eecCCCCCCCCCHHHhccCCCCC---CcchHHHHHHHHH
Confidence            23345667899999999999999999  788899999999 8998   4467776531101000   0011555565555


Q ss_pred             HHHHHHhccCCCceEEEEeeceEEeCCCCc-------ccchHHHH--HHHhCCCC----CCCCCccccccHHHHHHHHHH
Q 017977          209 EWEGTALKVNKDVRLALIRIGIVLGKDGGA-------LAKMIPLF--MMFAGGPL----GSGQQWFSWIHLDDIVNLIYE  275 (363)
Q Consensus       209 ~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~-------~~~~~~~~--~~~~~~~~----~~~~~~~~~i~v~D~a~a~~~  275 (363)
                      +...... ...+++++++||+.+|||....       ...++..+  ....+.++    +++.+.++++|++|+|++++.
T Consensus       139 ~~~~~~~-~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~~~~~  217 (306)
T PLN02725        139 KMCQAYR-IQYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADAVVF  217 (306)
T ss_pred             HHHHHHH-HHhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHHHHHH
Confidence            4444333 3348999999999999997431       11222222  11234432    567888999999999999999


Q ss_pred             HhcCCCCCceEEeeCCCCcCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhccCceeeecCcccChhhHHHcCCCcccccHH
Q 017977          276 ALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVK  355 (363)
Q Consensus       276 ~~~~~~~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~p~~~~~~  355 (363)
                      ++++....+.||+++++++++.|+++.+.+.+|.+..+....       .  .........++++|++++||+|+++ ++
T Consensus       218 ~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~-------~--~~~~~~~~~~d~~k~~~lg~~p~~~-~~  287 (306)
T PLN02725        218 LMRRYSGAEHVNVGSGDEVTIKELAELVKEVVGFEGELVWDT-------S--KPDGTPRKLMDSSKLRSLGWDPKFS-LK  287 (306)
T ss_pred             HHhccccCcceEeCCCCcccHHHHHHHHHHHhCCCCceeecC-------C--CCCcccccccCHHHHHHhCCCCCCC-HH
Confidence            998765567899999999999999999999998753221100       0  0000123446789998899999997 99


Q ss_pred             HHHHHHhC
Q 017977          356 DALKAIMS  363 (363)
Q Consensus       356 ~~l~~~~~  363 (363)
                      ++|+++++
T Consensus       288 ~~l~~~~~  295 (306)
T PLN02725        288 DGLQETYK  295 (306)
T ss_pred             HHHHHHHH
Confidence            99998763

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=100.00  E-value=1.4e-34  Score=284.52  Aligned_cols=292  Identities=17%  Similarity=0.171  Sum_probs=206.5

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhC--CCEEEEEeCCCC--cccccCC--CCCccccCcccccCcchHHhhc--cCCCEEE
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQAD--NHQVRVLTRSRS--KAELIFP--GKKTRFFPGVMIAEEPQWRDCI--QGSTAVV  121 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~--~~~~~~~--~~~~~~~~~~d~~~~~~~~~~~--~~~d~Vi  121 (363)
                      +|+|||||||||||++|+++|+++  |++|++++|...  ....+..  ......+..+|+.|.+.+..++  .++|+||
T Consensus         6 ~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~Vi   85 (668)
T PLN02260          6 PKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEGIDTIM   85 (668)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcCCCEEE
Confidence            479999999999999999999987  689999988531  1111111  0111224457998888777665  5799999


Q ss_pred             EccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCC-CCCeEEEeccceecCCcc------cccccCCCcchhhhh
Q 017977          122 NLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEG-VRPSVLELVKPKYLMRAA------HQEMITWLSDYCAKV  194 (363)
Q Consensus       122 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~v~~SS~~~~yg~~~------~~e~~~~~~~~~~~~  194 (363)
                      |+|+.... ......+..++++|+.++.+++++|++  .+ +++|||+||. .+||...      .+|+.+..+      
T Consensus        86 HlAa~~~~-~~~~~~~~~~~~~Nv~gt~~ll~a~~~--~~~vkr~I~~SS~-~vyg~~~~~~~~~~~E~~~~~p------  155 (668)
T PLN02260         86 HFAAQTHV-DNSFGNSFEFTKNNIYGTHVLLEACKV--TGQIRRFIHVSTD-EVYGETDEDADVGNHEASQLLP------  155 (668)
T ss_pred             ECCCccCc-hhhhhCHHHHHHHHHHHHHHHHHHHHh--cCCCcEEEEEcch-HHhCCCccccccCccccCCCCC------
Confidence            99997422 222334567889999999999999998  55 7899999999 8998211      133333211      


Q ss_pred             hhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHH--HHHhCCCC---CCCCCccccccHHHH
Q 017977          195 YCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDI  269 (363)
Q Consensus       195 ~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~D~  269 (363)
                        .+.|+.+|...+......... .+++++++||++||||++.. ..+++.+  ....+.++   +++.+.++|+|++|+
T Consensus       156 --~~~Y~~sK~~aE~~v~~~~~~-~~l~~vilR~~~VyGp~~~~-~~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dv  231 (668)
T PLN02260        156 --TNPYSATKAGAEMLVMAYGRS-YGLPVITTRGNNVYGPNQFP-EKLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDV  231 (668)
T ss_pred             --CCCcHHHHHHHHHHHHHHHHH-cCCCEEEECcccccCcCCCc-ccHHHHHHHHHhCCCCeEEecCCCceEeeEEHHHH
Confidence              123566665555554443333 48999999999999997643 2334433  33445544   678889999999999


Q ss_pred             HHHHHHHhcCCCCCceEEeeCCCCcCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhccCceeeecCcccChhhHHHcCCCc
Q 017977          270 VNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPF  349 (363)
Q Consensus       270 a~a~~~~~~~~~~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~p  349 (363)
                      |+++..+++....+++||+++++.+++.|+++.+.+.+|.+....+..       ............++++|+++|||+|
T Consensus       232 a~a~~~~l~~~~~~~vyni~~~~~~s~~el~~~i~~~~g~~~~~~i~~-------~~~~p~~~~~~~~d~~k~~~lGw~p  304 (668)
T PLN02260        232 AEAFEVVLHKGEVGHVYNIGTKKERRVIDVAKDICKLFGLDPEKSIKF-------VENRPFNDQRYFLDDQKLKKLGWQE  304 (668)
T ss_pred             HHHHHHHHhcCCCCCEEEECCCCeeEHHHHHHHHHHHhCCCCcceeee-------cCCCCCCcceeecCHHHHHHcCCCC
Confidence            999999997766677999999999999999999999999753211000       0000111123446899998999999


Q ss_pred             ccccHHHHHHHHhC
Q 017977          350 KYRYVKDALKAIMS  363 (363)
Q Consensus       350 ~~~~~~~~l~~~~~  363 (363)
                      +++ ++|+|+++++
T Consensus       305 ~~~-~~egl~~~i~  317 (668)
T PLN02260        305 RTS-WEEGLKKTME  317 (668)
T ss_pred             CCC-HHHHHHHHHH
Confidence            987 9999999863

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=100.00  E-value=5.4e-35  Score=241.08  Aligned_cols=286  Identities=18%  Similarity=0.216  Sum_probs=215.0

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCCCCCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGT  130 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~~~~~  130 (363)
                      ++|+||||.||||+||++.|..+||+|++++.-..........-  .....+++.--+-...++.++|.|+|+|+...+.
T Consensus        28 lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~--~~~~~fel~~hdv~~pl~~evD~IyhLAapasp~  105 (350)
T KOG1429|consen   28 LRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHW--IGHPNFELIRHDVVEPLLKEVDQIYHLAAPASPP  105 (350)
T ss_pred             cEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchh--ccCcceeEEEeechhHHHHHhhhhhhhccCCCCc
Confidence            79999999999999999999999999999997654433322211  0144577777777778889999999999986554


Q ss_pred             CCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC---CcccccccCCCcchhhhhhhcccchhhHHHH
Q 017977          131 RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM---RAAHQEMITWLSDYCAKVYCLVSFNRGVLVC  207 (363)
Q Consensus       131 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg---~~~~~e~~~~~~~~~~~~~~~~~y~~~k~~~  207 (363)
                      ++ ..++...+.+|..++.+.+-.|++  -+ ++|++.||+ .|||   ..|..|..+..-..   -..++-|..+| ..
T Consensus       106 ~y-~~npvktIktN~igtln~lglakr--v~-aR~l~aSTs-eVYgdp~~hpq~e~ywg~vnp---igpr~cydegK-r~  176 (350)
T KOG1429|consen  106 HY-KYNPVKTIKTNVIGTLNMLGLAKR--VG-ARFLLASTS-EVYGDPLVHPQVETYWGNVNP---IGPRSCYDEGK-RV  176 (350)
T ss_pred             cc-ccCccceeeecchhhHHHHHHHHH--hC-ceEEEeecc-cccCCcccCCCccccccccCc---CCchhhhhHHH-HH
Confidence            44 344667788999999999999999  45 679998888 9999   34555544422111   12234466666 34


Q ss_pred             HHHHHHHhccCCCceEEEEeeceEEeCCCCc-ccchHHHH--HHHhCCCC---CCCCCccccccHHHHHHHHHHHhcCCC
Q 017977          208 REWEGTALKVNKDVRLALIRIGIVLGKDGGA-LAKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSNPS  281 (363)
Q Consensus       208 ~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~-~~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~D~a~a~~~~~~~~~  281 (363)
                      .+.....+..+.|+.+.|.|+.+.|||.+.. ..+....+  +++.++++   ++|.|.++|.++.|+.++++++++++.
T Consensus       177 aE~L~~~y~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtRSF~yvsD~Vegll~Lm~s~~  256 (350)
T KOG1429|consen  177 AETLCYAYHKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTRSFQYVSDLVEGLLRLMESDY  256 (350)
T ss_pred             HHHHHHHhhcccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceEEEEeHHHHHHHHHHHhcCCC
Confidence            4455555655569999999999999997633 24555555  67778886   899999999999999999999998765


Q ss_pred             CCceEEeeCCCCcCHHHHHHHHHHHhCCCCCC----CCcHHHHHHHhccCceeeecCcccChhhHHH-cCCCcccccHHH
Q 017977          282 YRGVINGTAPNPVRLAEMCDHLGNVLGRPSWL----PVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYRYVKD  356 (363)
Q Consensus       282 ~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lG~~p~~~~~~~  356 (363)
                       .+-+|+++++.+|+.|+++.+.+..+....+    +-++.             ......|+.++++ |||.|+.+ ++|
T Consensus       257 -~~pvNiGnp~e~Tm~elAemv~~~~~~~s~i~~~~~~~Dd-------------p~kR~pDit~ake~LgW~Pkv~-L~e  321 (350)
T KOG1429|consen  257 -RGPVNIGNPGEFTMLELAEMVKELIGPVSEIEFVENGPDD-------------PRKRKPDITKAKEQLGWEPKVS-LRE  321 (350)
T ss_pred             -cCCcccCCccceeHHHHHHHHHHHcCCCcceeecCCCCCC-------------ccccCccHHHHHHHhCCCCCCc-HHH
Confidence             5679999999999999999999999654111    11111             1345567899975 99999998 999


Q ss_pred             HHHHHh
Q 017977          357 ALKAIM  362 (363)
Q Consensus       357 ~l~~~~  362 (363)
                      +|..++
T Consensus       322 gL~~t~  327 (350)
T KOG1429|consen  322 GLPLTV  327 (350)
T ss_pred             hhHHHH
Confidence            998875

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=100.00  E-value=1.6e-34  Score=257.17  Aligned_cols=271  Identities=13%  Similarity=0.067  Sum_probs=190.9

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc--CCCEEEEccCCCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGTPI  128 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~Vi~~a~~~~  128 (363)
                      |+||||||+||||++|+++|+++| +|++++|...             ...+|+.|.+.+.++++  ++|+|||+|+.. 
T Consensus         1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~-------------~~~~Dl~d~~~~~~~~~~~~~D~Vih~Aa~~-   65 (299)
T PRK09987          1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHST-------------DYCGDFSNPEGVAETVRKIRPDVIVNAAAHT-   65 (299)
T ss_pred             CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccc-------------cccCCCCCHHHHHHHHHhcCCCEEEECCccC-
Confidence            589999999999999999999999 7999988632             22369999999998887  589999999974 


Q ss_pred             CCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC---CcccccccCCCcchhhhhhhcccchhhHH
Q 017977          129 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM---RAAHQEMITWLSDYCAKVYCLVSFNRGVL  205 (363)
Q Consensus       129 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg---~~~~~e~~~~~~~~~~~~~~~~~y~~~k~  205 (363)
                      ....+..+++..+++|+.++.+++++|.+  .++ ++||+||. .+||   ..+++|+.+..+.        +.|+++|+
T Consensus        66 ~~~~~~~~~~~~~~~N~~~~~~l~~aa~~--~g~-~~v~~Ss~-~Vy~~~~~~p~~E~~~~~P~--------~~Yg~sK~  133 (299)
T PRK09987         66 AVDKAESEPEFAQLLNATSVEAIAKAANE--VGA-WVVHYSTD-YVFPGTGDIPWQETDATAPL--------NVYGETKL  133 (299)
T ss_pred             CcchhhcCHHHHHHHHHHHHHHHHHHHHH--cCC-eEEEEccc-eEECCCCCCCcCCCCCCCCC--------CHHHHHHH
Confidence            33334556678889999999999999999  665 69999998 8998   3478887764331        11444454


Q ss_pred             HHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHH--HHHhCCCC---CC--CCCccccccHHHHHHHHHHHhc
Q 017977          206 VCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL---GS--GQQWFSWIHLDDIVNLIYEALS  278 (363)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~--~~~~~~~~---~~--~~~~~~~i~v~D~a~a~~~~~~  278 (363)
                      ..++....     ...+++|+||+++|||.+..   +++.+  ....++++   ++  +.+.+.+..++|+++++..++.
T Consensus       134 ~~E~~~~~-----~~~~~~ilR~~~vyGp~~~~---~~~~~~~~~~~~~~~~v~~d~~g~~~~~~~~~d~~~~~~~~~~~  205 (299)
T PRK09987        134 AGEKALQE-----HCAKHLIFRTSWVYAGKGNN---FAKTMLRLAKEREELSVINDQFGAPTGAELLADCTAHAIRVALN  205 (299)
T ss_pred             HHHHHHHH-----hCCCEEEEecceecCCCCCC---HHHHHHHHHhcCCCeEEeCCCcCCCCCHHHHHHHHHHHHHHhhc
Confidence            44333321     23467999999999997532   23332  22334443   33  4444556667778888887776


Q ss_pred             CCCCCceEEeeCCCCcCHHHHHHHHHHHhCC---CC----CCCCcHHHHHHHhccCceeeecCcccChhhHHH-cCCCcc
Q 017977          279 NPSYRGVINGTAPNPVRLAEMCDHLGNVLGR---PS----WLPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFK  350 (363)
Q Consensus       279 ~~~~~g~~~i~~~~~~s~~el~~~i~~~~g~---~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lG~~p~  350 (363)
                      .....|+||+++++.+|+.|+++.|.+..+.   +.    ..+.+......     ......+..++++|+++ +||+|.
T Consensus       206 ~~~~~giyni~~~~~~s~~e~~~~i~~~~~~~g~~~~~~~i~~~~~~~~~~-----~~~rp~~~~ld~~k~~~~lg~~~~  280 (299)
T PRK09987        206 KPEVAGLYHLVASGTTTWHDYAALVFEEARKAGITLALNKLNAVPTSAYPT-----PARRPHNSRLNTEKFQQNFALVLP  280 (299)
T ss_pred             cCCCCCeEEeeCCCCccHHHHHHHHHHHHHhcCCCcCcCeeeecchhhcCC-----CCCCCCcccCCHHHHHHHhCCCCc
Confidence            5544579999999999999999999886543   21    11222211111     01111344577999976 999986


Q ss_pred             cccHHHHHHHHhC
Q 017977          351 YRYVKDALKAIMS  363 (363)
Q Consensus       351 ~~~~~~~l~~~~~  363 (363)
                        +|+++|+++++
T Consensus       281 --~~~~~l~~~~~  291 (299)
T PRK09987        281 --DWQVGVKRMLT  291 (299)
T ss_pred             --cHHHHHHHHHH
Confidence              59999998863

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=100.00  E-value=3.1e-35  Score=242.69  Aligned_cols=294  Identities=17%  Similarity=0.168  Sum_probs=214.8

Q ss_pred             cEEEEecCcchHHHHHHHHHHhC--CCEEEEEeCCC--CcccccCC--CCCccccCcccccCcchHHhhcc--CCCEEEE
Q 017977           51 MTVSVTGATGFIGRRLVQRLQAD--NHQVRVLTRSR--SKAELIFP--GKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVN  122 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~--~~~~~~~~--~~~~~~~~~~d~~~~~~~~~~~~--~~d~Vi~  122 (363)
                      ++|+||||+||||++.+..+...  .++.+.++.-.  +....+.+  ......+...|+.+...+...+.  .+|.|+|
T Consensus         7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~~~id~vih   86 (331)
T KOG0747|consen    7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRNSPNYKFVEGDIADADLVLYLFETEEIDTVIH   86 (331)
T ss_pred             ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhccCCCceEeeccccchHHHHhhhccCchhhhhh
Confidence            68999999999999999999985  45666655421  11111111  11112244567777777766664  6899999


Q ss_pred             ccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC---Ccccc-cccCCC--cchhhhhhh
Q 017977          123 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM---RAAHQ-EMITWL--SDYCAKVYC  196 (363)
Q Consensus       123 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg---~~~~~-e~~~~~--~~~~~~~~~  196 (363)
                      +|+..+. ..+...+-.....|+.++..|++++... .++++|||+||. .|||   +.... |.+.++  ++|.++|  
T Consensus        87 faa~t~v-d~s~~~~~~~~~nnil~t~~Lle~~~~s-g~i~~fvhvSTd-eVYGds~~~~~~~E~s~~nPtnpyAasK--  161 (331)
T KOG0747|consen   87 FAAQTHV-DRSFGDSFEFTKNNILSTHVLLEAVRVS-GNIRRFVHVSTD-EVYGDSDEDAVVGEASLLNPTNPYAASK--  161 (331)
T ss_pred             hHhhhhh-hhhcCchHHHhcCCchhhhhHHHHHHhc-cCeeEEEEeccc-ceecCccccccccccccCCCCCchHHHH--
Confidence            9997433 3344556778889999999999999984 478999999999 9999   23333 666543  4666653  


Q ss_pred             cccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHH-H-HHhCCCC---CCCCCccccccHHHHHH
Q 017977          197 LVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF-M-MFAGGPL---GSGQQWFSWIHLDDIVN  271 (363)
Q Consensus       197 ~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~-~~~~~~~---~~~~~~~~~i~v~D~a~  271 (363)
                               ++++.....+...++++++++|.++||||++... .+++.| . +..+.+.   ++|.+.++++|++|+++
T Consensus       162 ---------aAaE~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~-klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~~e  231 (331)
T KOG0747|consen  162 ---------AAAEMLVRSYGRSYGLPVVTTRMNNVYGPNQYPE-KLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDVSE  231 (331)
T ss_pred             ---------HHHHHHHHHHhhccCCcEEEEeccCccCCCcChH-HHhHHHHHHHHhCCCcceecCcccceeeEeHHHHHH
Confidence                     5667777777777899999999999999988653 445544 3 3334433   89999999999999999


Q ss_pred             HHHHHhcCCCCCceEEeeCCCCcCHHHHHHHHHHHhCCCCC-CCCcHHHHHHHhccCceeeecCcccChhhHHHcCCCcc
Q 017977          272 LIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSW-LPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFK  350 (363)
Q Consensus       272 a~~~~~~~~~~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~p~  350 (363)
                      |+..+++....+.+|||+++.+.+..|+++.|.+.+.+... .+.+.+..   +-+.+......+.++..|+|.|||+|+
T Consensus       232 a~~~v~~Kg~~geIYNIgtd~e~~~~~l~k~i~eli~~~~~~~~~~p~~~---~v~dRp~nd~Ry~~~~eKik~LGw~~~  308 (331)
T KOG0747|consen  232 AFKAVLEKGELGEIYNIGTDDEMRVIDLAKDICELFEKRLPNIDTEPFIF---FVEDRPYNDLRYFLDDEKIKKLGWRPT  308 (331)
T ss_pred             HHHHHHhcCCccceeeccCcchhhHHHHHHHHHHHHHHhccCCCCCCcce---ecCCCCcccccccccHHHHHhcCCccc
Confidence            99999988666779999999999999999999999987521 12211111   112222222347789999999999999


Q ss_pred             cccHHHHHHHHhC
Q 017977          351 YRYVKDALKAIMS  363 (363)
Q Consensus       351 ~~~~~~~l~~~~~  363 (363)
                      ++ |++||+.+++
T Consensus       309 ~p-~~eGLrktie  320 (331)
T KOG0747|consen  309 TP-WEEGLRKTIE  320 (331)
T ss_pred             Cc-HHHHHHHHHH
Confidence            98 9999999875

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=100.00  E-value=3.7e-34  Score=250.65  Aligned_cols=247  Identities=19%  Similarity=0.221  Sum_probs=182.3

Q ss_pred             EEecCcchHHHHHHHHHHhCC--CEEEEEeCCCCccccc-CCCCCccccCcccccCcchHHhhccCCCEEEEccCCCCCC
Q 017977           54 SVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELI-FPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGT  130 (363)
Q Consensus        54 lVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~-~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~~~~~  130 (363)
                      |||||+||||++|+++|+++|  ++|+++++........ ........+..+|++|.+++.++++++|+|||+|+.... 
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa~~~~-   79 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQKSGVKEYIQGDITDPESLEEALEGVDVVFHTAAPVPP-   79 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhcccceeEEEeccccHHHHHHHhcCCceEEEeCccccc-
Confidence            699999999999999999999  7999999887654311 111111115578999999999999999999999997422 


Q ss_pred             CCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC----Cccc---ccccCCCcchhhhhhhcccchhh
Q 017977          131 RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM----RAAH---QEMITWLSDYCAKVYCLVSFNRG  203 (363)
Q Consensus       131 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg----~~~~---~e~~~~~~~~~~~~~~~~~y~~~  203 (363)
                       +.....+.++++|+.||+||+++|.+  .+++++||+||. ++++    ..++   +|..+..+.+      ...|+.+
T Consensus        80 -~~~~~~~~~~~vNV~GT~nvl~aa~~--~~VkrlVytSS~-~vv~~~~~~~~~~~~dE~~~~~~~~------~~~Y~~S  149 (280)
T PF01073_consen   80 -WGDYPPEEYYKVNVDGTRNVLEAARK--AGVKRLVYTSSI-SVVFDNYKGDPIINGDEDTPYPSSP------LDPYAES  149 (280)
T ss_pred             -cCcccHHHHHHHHHHHHHHHHHHHHH--cCCCEEEEEcCc-ceeEeccCCCCcccCCcCCcccccc------cCchHHH
Confidence             22445678999999999999999999  899999999999 5554    2222   3443322221      2347777


Q ss_pred             HHHHHHHHHHHhc---cC-CCceEEEEeeceEEeCCCCcccchHHH-HHHHh-CCCCCCCCCccccccHHHHHHHHHHHh
Q 017977          204 VLVCREWEGTALK---VN-KDVRLALIRIGIVLGKDGGALAKMIPL-FMMFA-GGPLGSGQQWFSWIHLDDIVNLIYEAL  277 (363)
Q Consensus       204 k~~~~~~~~~~~~---~~-~~~~~~ilRp~~v~g~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~i~v~D~a~a~~~~~  277 (363)
                      |..+++.......   .. ..+..++|||+.||||++......+.. ..... ...++++....+++|++|+|.+++.++
T Consensus       150 K~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ahvlA~  229 (280)
T PF01073_consen  150 KALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHAHVLAA  229 (280)
T ss_pred             HHHHHHHHHhhcccccccccceeEEEEeccEEeCcccccccchhhHHHHhcccceeecCCCceECcEeHHHHHHHHHHHH
Confidence            8666666555444   11 159999999999999987554333222 22221 122477778899999999999998876


Q ss_pred             c---CC----C-CCceEEeeCCCCcC-HHHHHHHHHHHhCCCC
Q 017977          278 S---NP----S-YRGVINGTAPNPVR-LAEMCDHLGNVLGRPS  311 (363)
Q Consensus       278 ~---~~----~-~~g~~~i~~~~~~s-~~el~~~i~~~~g~~~  311 (363)
                      +   ++    . .+..|+|++++++. +.|++..+.+.+|.+.
T Consensus       230 ~~L~~~~~~~~~~G~~y~itd~~p~~~~~~f~~~~~~~~G~~~  272 (280)
T PF01073_consen  230 QALLEPGKPERVAGQAYFITDGEPVPSFWDFMRPLWEALGYPP  272 (280)
T ss_pred             HHhccccccccCCCcEEEEECCCccCcHHHHHHHHHHHCCCCC
Confidence            4   22    2 34499999999998 9999999999999873

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=3e-34  Score=261.90  Aligned_cols=302  Identities=17%  Similarity=0.187  Sum_probs=199.5

Q ss_pred             CCCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCC---CCCccccCcccccCcchHHhhccCCCEEEEc
Q 017977           47 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP---GKKTRFFPGVMIAEEPQWRDCIQGSTAVVNL  123 (363)
Q Consensus        47 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~  123 (363)
                      ++..|+||||||+||||++++++|+++|++|++++|+..+......   ......+..+|+.+.+++.++++++|+|||+
T Consensus         7 ~~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~   86 (353)
T PLN02896          7 ESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVFHV   86 (353)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEEEC
Confidence            3455799999999999999999999999999999998654332211   1111224457999999999999999999999


Q ss_pred             cCCCCCCC-CChhhHH-----HHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCC--------cccccccCCCcc
Q 017977          124 AGTPIGTR-WSSEIKK-----EIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMR--------AAHQEMITWLSD  189 (363)
Q Consensus       124 a~~~~~~~-~~~~~~~-----~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~--------~~~~e~~~~~~~  189 (363)
                      |+...... .....+.     .+++.|+.++.+++++|.+. .++++||++||. ++||.        .+++|+.+....
T Consensus        87 A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~-~~~~~~v~~SS~-~vyg~~~~~~~~~~~~~E~~~~p~~  164 (353)
T PLN02896         87 AASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKS-KTVKRVVFTSSI-STLTAKDSNGRWRAVVDETCQTPID  164 (353)
T ss_pred             CccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhc-CCccEEEEEech-hhccccccCCCCCCccCcccCCcHH
Confidence            99743221 1112233     34566679999999999882 247889999999 88871        235555221111


Q ss_pred             hh-hhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCc-ccchHHHH-HHHhCCCC--C--CC----C
Q 017977          190 YC-AKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA-LAKMIPLF-MMFAGGPL--G--SG----Q  258 (363)
Q Consensus       190 ~~-~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~-~~~~~~~~-~~~~~~~~--~--~~----~  258 (363)
                      +. ......+.|+.+|+..+....... ...+++++++||+++|||.... ...++..+ ....+...  +  .+    .
T Consensus       165 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  243 (353)
T PLN02896        165 HVWNTKASGWVYVLSKLLTEEAAFKYA-KENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDSKLFSILSAVNSRM  243 (353)
T ss_pred             HhhccCCCCccHHHHHHHHHHHHHHHH-HHcCCeEEEEcCCcccCCCcCCCCCchHHHHHHHhcCCcccccccccccccc
Confidence            00 000112347777866655555433 3349999999999999996532 22222222 22223221  1  11    1


Q ss_pred             CccccccHHHHHHHHHHHhcCCCCCceEEeeCCCCcCHHHHHHHHHHHhCCCC-CCCCcHHHHHHHhccCceeeecCccc
Q 017977          259 QWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPS-WLPVPEFALKAVLGEGAFVVLEGQRV  337 (363)
Q Consensus       259 ~~~~~i~v~D~a~a~~~~~~~~~~~g~~~i~~~~~~s~~el~~~i~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  337 (363)
                      ..++|||++|+|++++.+++.+...+.|++ ++.++++.|+++.+.+.++... .+....    ...++      ....+
T Consensus       244 ~~~dfi~v~Dva~a~~~~l~~~~~~~~~~~-~~~~~s~~el~~~i~~~~~~~~~~~~~~~----~~~~~------~~~~~  312 (353)
T PLN02896        244 GSIALVHIEDICDAHIFLMEQTKAEGRYIC-CVDSYDMSELINHLSKEYPCSNIQVRLDE----EKRGS------IPSEI  312 (353)
T ss_pred             CceeEEeHHHHHHHHHHHHhCCCcCccEEe-cCCCCCHHHHHHHHHHhCCCCCccccccc----cccCc------ccccc
Confidence            236899999999999999987655567854 5678999999999999997431 111110    00010      11235


Q ss_pred             ChhhHHHcCCCcccccHHHHHHHHhC
Q 017977          338 VPARAKELGFPFKYRYVKDALKAIMS  363 (363)
Q Consensus       338 ~~~k~~~lG~~p~~~~~~~~l~~~~~  363 (363)
                      +++|+++|||+|+++ ++++|+++++
T Consensus       313 ~~~~~~~lGw~p~~~-l~~~i~~~~~  337 (353)
T PLN02896        313 SSKKLRDLGFEYKYG-IEEIIDQTID  337 (353)
T ss_pred             CHHHHHHcCCCccCC-HHHHHHHHHH
Confidence            688888899999997 9999999863

>PLN02240 UDP-glucose 4-epimerase

Probab=100.00  E-value=4.3e-34  Score=261.25  Aligned_cols=292  Identities=17%  Similarity=0.195  Sum_probs=206.5

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCccc----ccC----CCCCccccCcccccCcchHHhhcc--CCC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE----LIF----PGKKTRFFPGVMIAEEPQWRDCIQ--GST  118 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~~~----~~~~~~~~~~~d~~~~~~~~~~~~--~~d  118 (363)
                      ++++|+|||||||||++|+++|+++|++|++++|......    ...    .......+..+|+.|.+++.++++  ++|
T Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~d   83 (352)
T PLN02240          4 MGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFASTRFD   83 (352)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhCCCC
Confidence            3469999999999999999999999999999987543211    010    001111244579999999988876  689


Q ss_pred             EEEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC---CcccccccCCCcchhhhhh
Q 017977          119 AVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM---RAAHQEMITWLSDYCAKVY  195 (363)
Q Consensus       119 ~Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg---~~~~~e~~~~~~~~~~~~~  195 (363)
                      +|||+|+.... ......+...+++|+.++.+++++|.+  .+++++|++||. ++||   ..+++|+.+..+       
T Consensus        84 ~vih~a~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~~v~~Ss~-~vyg~~~~~~~~E~~~~~~-------  152 (352)
T PLN02240         84 AVIHFAGLKAV-GESVAKPLLYYDNNLVGTINLLEVMAK--HGCKKLVFSSSA-TVYGQPEEVPCTEEFPLSA-------  152 (352)
T ss_pred             EEEEccccCCc-cccccCHHHHHHHHHHHHHHHHHHHHH--cCCCEEEEEccH-HHhCCCCCCCCCCCCCCCC-------
Confidence            99999986422 223345678899999999999999998  788899999998 8898   446777765432       


Q ss_pred             hcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCC---------cccchHHHH-HHHhCC--CC---------
Q 017977          196 CLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGG---------ALAKMIPLF-MMFAGG--PL---------  254 (363)
Q Consensus       196 ~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~---------~~~~~~~~~-~~~~~~--~~---------  254 (363)
                       ...|+.+|...+...........+++++++|++++||++..         ....+.+.+ ....+.  .+         
T Consensus       153 -~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  231 (352)
T PLN02240        153 -TNPYGRTKLFIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPT  231 (352)
T ss_pred             -CCHHHHHHHHHHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCCCC
Confidence             12366667666665554443334789999999999997421         112233333 222222  11         


Q ss_pred             CCCCCccccccHHHHHHHHHHHhcCC----CC-CceEEeeCCCCcCHHHHHHHHHHHhCCCCCCC-CcHHHHHHHhccCc
Q 017977          255 GSGQQWFSWIHLDDIVNLIYEALSNP----SY-RGVINGTAPNPVRLAEMCDHLGNVLGRPSWLP-VPEFALKAVLGEGA  328 (363)
Q Consensus       255 ~~~~~~~~~i~v~D~a~a~~~~~~~~----~~-~g~~~i~~~~~~s~~el~~~i~~~~g~~~~~~-~~~~~~~~~~~~~~  328 (363)
                      +++.+.++|||++|+|++++.++...    .. +++||+++++++|++|+++.+.+.+|++..+. .+..     ..+  
T Consensus       232 ~~g~~~~~~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~-----~~~--  304 (352)
T PLN02240        232 KDGTGVRDYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGTGKGTSVLEMVAAFEKASGKKIPLKLAPRR-----PGD--  304 (352)
T ss_pred             CCCCEEEeeEEHHHHHHHHHHHHhhhhhccCCCCceEEccCCCcEeHHHHHHHHHHHhCCCCCceeCCCC-----CCC--
Confidence            26788899999999999999888542    22 35999999999999999999999999763221 1110     000  


Q ss_pred             eeeecCcccChhhHHH-cCCCcccccHHHHHHHHhC
Q 017977          329 FVVLEGQRVVPARAKE-LGFPFKYRYVKDALKAIMS  363 (363)
Q Consensus       329 ~~~~~~~~~~~~k~~~-lG~~p~~~~~~~~l~~~~~  363 (363)
                         ......+++|+++ |||+|+++ ++|+|+++++
T Consensus       305 ---~~~~~~d~~k~~~~lg~~p~~~-l~~~l~~~~~  336 (352)
T PLN02240        305 ---AEEVYASTEKAEKELGWKAKYG-IDEMCRDQWN  336 (352)
T ss_pred             ---hhhhhcCHHHHHHHhCCCCCCC-HHHHHHHHHH
Confidence               1223357889964 89999997 9999999863

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=100.00  E-value=5.7e-34  Score=256.40  Aligned_cols=284  Identities=16%  Similarity=0.177  Sum_probs=198.3

Q ss_pred             EEEecCcchHHHHHHHHHHhCCC-EEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhc----cCCCEEEEccCCC
Q 017977           53 VSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI----QGSTAVVNLAGTP  127 (363)
Q Consensus        53 vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~----~~~d~Vi~~a~~~  127 (363)
                      |||||||||||+++++.|.++|+ +|++++|...... +.....  .....|+.+.+.++.+.    .++|+|||+|+..
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~-~~~~~~--~~~~~d~~~~~~~~~~~~~~~~~~D~vvh~A~~~   77 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGHK-FLNLAD--LVIADYIDKEDFLDRLEKGAFGKIEAIFHQGACS   77 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCchh-hhhhhh--eeeeccCcchhHHHHHHhhccCCCCEEEECcccc
Confidence            69999999999999999999997 7988887654321 111100  12334666666666554    4799999999964


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC--CcccccccCCCcchhhhhhhcccchhhHH
Q 017977          128 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM--RAAHQEMITWLSDYCAKVYCLVSFNRGVL  205 (363)
Q Consensus       128 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg--~~~~~e~~~~~~~~~~~~~~~~~y~~~k~  205 (363)
                      .   ....++...+++|+.++.+++++|.+  .++ ++||+||. ++|+  ..+++|+.++..       ..+.|+.+|.
T Consensus        78 ~---~~~~~~~~~~~~n~~~~~~ll~~~~~--~~~-~~v~~SS~-~vy~~~~~~~~e~~~~~~-------p~~~Y~~sK~  143 (314)
T TIGR02197        78 D---TTETDGEYMMENNYQYSKRLLDWCAE--KGI-PFIYASSA-ATYGDGEAGFREGRELER-------PLNVYGYSKF  143 (314)
T ss_pred             C---ccccchHHHHHHHHHHHHHHHHHHHH--hCC-cEEEEccH-HhcCCCCCCcccccCcCC-------CCCHHHHHHH
Confidence            2   22345677889999999999999998  666 69999998 8998  445555543211       1123566665


Q ss_pred             HHHHHHHHHh-ccCCCceEEEEeeceEEeCCCCc---ccchHHH-H-HHHhCCCC---------CCCCCccccccHHHHH
Q 017977          206 VCREWEGTAL-KVNKDVRLALIRIGIVLGKDGGA---LAKMIPL-F-MMFAGGPL---------GSGQQWFSWIHLDDIV  270 (363)
Q Consensus       206 ~~~~~~~~~~-~~~~~~~~~ilRp~~v~g~~~~~---~~~~~~~-~-~~~~~~~~---------~~~~~~~~~i~v~D~a  270 (363)
                      .++.+..+.. ....+++++++||+.+||++...   ...++.. + ....+.++         +++++.++++|++|+|
T Consensus       144 ~~e~~~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a  223 (314)
T TIGR02197       144 LFDQYVRRRVLPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKDVV  223 (314)
T ss_pred             HHHHHHHHHhHhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEHHHHH
Confidence            5555544322 22236899999999999997532   1222322 2 22333322         4577889999999999


Q ss_pred             HHHHHHhcCCCCCceEEeeCCCCcCHHHHHHHHHHHhCCCCC---CCCcHHHHHHHhccCceeeecCcccChhhHHH-cC
Q 017977          271 NLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSW---LPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LG  346 (363)
Q Consensus       271 ~a~~~~~~~~~~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lG  346 (363)
                      ++++.++.. ...++||++++++++++|+++.+.+.+|.+..   .+.|+...        ........++++|+++ +|
T Consensus       224 ~~i~~~~~~-~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~--------~~~~~~~~~~~~k~~~~l~  294 (314)
T TIGR02197       224 DVNLWLLEN-GVSGIFNLGTGRARSFNDLADAVFKALGKDEKIEYIPMPEALR--------GKYQYFTQADITKLRAAGY  294 (314)
T ss_pred             HHHHHHHhc-ccCceEEcCCCCCccHHHHHHHHHHHhCCCCcceeccCccccc--------cccccccccchHHHHHhcC
Confidence            999999987 45679999999999999999999999997632   23333210        0011234578999975 89


Q ss_pred             CCcccccHHHHHHHHhC
Q 017977          347 FPFKYRYVKDALKAIMS  363 (363)
Q Consensus       347 ~~p~~~~~~~~l~~~~~  363 (363)
                      |.|+++ ++|+|+++++
T Consensus       295 ~~p~~~-l~~~l~~~~~  310 (314)
T TIGR02197       295 YGPFTT-LEEGVKDYVQ  310 (314)
T ss_pred             CCCccc-HHHHHHHHHH
Confidence            999997 9999999873

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=100.00  E-value=6.6e-34  Score=258.57  Aligned_cols=291  Identities=17%  Similarity=0.203  Sum_probs=203.7

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCccccc----CC-CCCccccCcccccCcchHHhhcc--CCCEEEEc
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI----FP-GKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNL  123 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~-~~~~~~~~~~d~~~~~~~~~~~~--~~d~Vi~~  123 (363)
                      |+|+||||+||||++|++.|+++|++|++++|........    .. ......+..+|+.|.+++.++++  ++|+|||+
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh~   80 (338)
T PRK10675          1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVIHF   80 (338)
T ss_pred             CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEEEC
Confidence            6899999999999999999999999999998754322111    00 00111234578999988888876  58999999


Q ss_pred             cCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC---CcccccccCCCcchhhhhhhcccc
Q 017977          124 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM---RAAHQEMITWLSDYCAKVYCLVSF  200 (363)
Q Consensus       124 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg---~~~~~e~~~~~~~~~~~~~~~~~y  200 (363)
                      |+..... .........+++|+.++.+++++|++  .+++++|++||+ ++||   ..+++|+.+...+       .+.|
T Consensus        81 a~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~~v~~Ss~-~~yg~~~~~~~~E~~~~~~p-------~~~Y  149 (338)
T PRK10675         81 AGLKAVG-ESVQKPLEYYDNNVNGTLRLISAMRA--ANVKNLIFSSSA-TVYGDQPKIPYVESFPTGTP-------QSPY  149 (338)
T ss_pred             Ccccccc-chhhCHHHHHHHHHHHHHHHHHHHHH--cCCCEEEEeccH-HhhCCCCCCccccccCCCCC-------CChh
Confidence            9864221 12234567889999999999999999  788899999998 8898   3456776653111       1236


Q ss_pred             hhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCC---------cccchHHHH-HHHhCC-C-C---------CCCCC
Q 017977          201 NRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGG---------ALAKMIPLF-MMFAGG-P-L---------GSGQQ  259 (363)
Q Consensus       201 ~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~---------~~~~~~~~~-~~~~~~-~-~---------~~~~~  259 (363)
                      +.+|...+.+.........+++++++|++.+||+...         ....+++.+ ....+. + +         .++.+
T Consensus       150 ~~sK~~~E~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  229 (338)
T PRK10675        150 GKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTG  229 (338)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCCCCcE
Confidence            6666555555554433333799999999999997421         012233333 222221 1 1         25677


Q ss_pred             ccccccHHHHHHHHHHHhcCC--C-CCceEEeeCCCCcCHHHHHHHHHHHhCCCCCCC-CcHHHHHHHhccCceeeecCc
Q 017977          260 WFSWIHLDDIVNLIYEALSNP--S-YRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLP-VPEFALKAVLGEGAFVVLEGQ  335 (363)
Q Consensus       260 ~~~~i~v~D~a~a~~~~~~~~--~-~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~  335 (363)
                      .++++|++|+|++++.+++..  . .+++||+++++++++.|+++.+.+.+|++..+. .|..     ..     .....
T Consensus       230 ~~~~v~v~D~a~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~-----~~-----~~~~~  299 (338)
T PRK10675        230 VRDYIHVMDLADGHVAAMEKLANKPGVHIYNLGAGVGSSVLDVVNAFSKACGKPVNYHFAPRR-----EG-----DLPAY  299 (338)
T ss_pred             EEeeEEHHHHHHHHHHHHHhhhccCCCceEEecCCCceeHHHHHHHHHHHhCCCCCeeeCCCC-----CC-----chhhh
Confidence            899999999999999998752  2 235999999999999999999999999763221 1110     00     01234


Q ss_pred             ccChhhHH-HcCCCcccccHHHHHHHHhC
Q 017977          336 RVVPARAK-ELGFPFKYRYVKDALKAIMS  363 (363)
Q Consensus       336 ~~~~~k~~-~lG~~p~~~~~~~~l~~~~~  363 (363)
                      .++++|++ .+||+|+++ ++++|+++++
T Consensus       300 ~~~~~k~~~~lg~~p~~~-~~~~~~~~~~  327 (338)
T PRK10675        300 WADASKADRELNWRVTRT-LDEMAQDTWH  327 (338)
T ss_pred             hcCHHHHHHHhCCCCcCc-HHHHHHHHHH
Confidence            46799996 589999997 9999999863

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=100.00  E-value=2.9e-33  Score=253.39  Aligned_cols=295  Identities=19%  Similarity=0.214  Sum_probs=207.3

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCCCCCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGT  130 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~~~~~  130 (363)
                      |+|+||||+||||+++++.|+++|++|++++|++.........  ......+|+.|.+++.++++++|+|||+|+...  
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~~--   76 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLEGL--DVEIVEGDLRDPASLRKAVAGCRALFHVAADYR--   76 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccccccC--CceEEEeeCCCHHHHHHHHhCCCEEEEeceecc--
Confidence            5899999999999999999999999999999987654332211  122456799999999999999999999998531  


Q ss_pred             CCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC----CcccccccCCCcchhhhhhhcccchhhHHH
Q 017977          131 RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM----RAAHQEMITWLSDYCAKVYCLVSFNRGVLV  206 (363)
Q Consensus       131 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg----~~~~~e~~~~~~~~~~~~~~~~~y~~~k~~  206 (363)
                       .....++..+++|+.++.++++++.+  .+++++|++||. .+|+    ..+++|+.+..+...     ...|..+|..
T Consensus        77 -~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~~v~~SS~-~~~~~~~~~~~~~e~~~~~~~~~-----~~~Y~~sK~~  147 (328)
T TIGR03466        77 -LWAPDPEEMYAANVEGTRNLLRAALE--AGVERVVYTSSV-ATLGVRGDGTPADETTPSSLDDM-----IGHYKRSKFL  147 (328)
T ss_pred             -cCCCCHHHHHHHHHHHHHHHHHHHHH--hCCCeEEEEech-hhcCcCCCCCCcCccCCCCcccc-----cChHHHHHHH
Confidence             12234678899999999999999999  788899999999 7887    235666654322110     1236666655


Q ss_pred             HHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHH-HHHhCCCCCCCCCccccccHHHHHHHHHHHhcCCCCCce
Q 017977          207 CREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGV  285 (363)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~g~  285 (363)
                      .+......... .+++++++||+.+||++..........+ ....+......+...+++|++|+|++++.+++++..+..
T Consensus       148 ~e~~~~~~~~~-~~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~  226 (328)
T TIGR03466       148 AEQAALEMAAE-KGLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMPAYVDTGLNLVHVDDVAEGHLLALERGRIGER  226 (328)
T ss_pred             HHHHHHHHHHh-cCCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCCceeeCCCcceEEHHHHHHHHHHHHhCCCCCce
Confidence            55554443332 4899999999999999754322111111 222222221223446899999999999999987654447


Q ss_pred             EEeeCCCCcCHHHHHHHHHHHhCCC-CCCCCcHHHHHHH----------hccCce-------eeecCcccChhhHH-HcC
Q 017977          286 INGTAPNPVRLAEMCDHLGNVLGRP-SWLPVPEFALKAV----------LGEGAF-------VVLEGQRVVPARAK-ELG  346 (363)
Q Consensus       286 ~~i~~~~~~s~~el~~~i~~~~g~~-~~~~~~~~~~~~~----------~~~~~~-------~~~~~~~~~~~k~~-~lG  346 (363)
                      |+++ +++++++|+++.+.+.+|++ ..++.|.+.....          .+....       .......+|++|++ .||
T Consensus       227 ~~~~-~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg  305 (328)
T TIGR03466       227 YILG-GENLTLKQILDKLAEITGRPAPRVKLPRWLLLPVAWGAEALARLTGKEPRVTVDGVRMAKKKMFFSSAKAVRELG  305 (328)
T ss_pred             EEec-CCCcCHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHhccCCCChHHHHHHcC
Confidence            7775 68899999999999999986 4456676543321          111110       01124457899996 599


Q ss_pred             CCcccccHHHHHHHHh
Q 017977          347 FPFKYRYVKDALKAIM  362 (363)
Q Consensus       347 ~~p~~~~~~~~l~~~~  362 (363)
                      |+|+ + ++++|++++
T Consensus       306 ~~p~-~-~~~~i~~~~  319 (328)
T TIGR03466       306 YRQR-P-AREALRDAV  319 (328)
T ss_pred             CCCc-C-HHHHHHHHH
Confidence            9996 5 999999875

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=100.00  E-value=2.8e-33  Score=252.25  Aligned_cols=287  Identities=19%  Similarity=0.191  Sum_probs=202.8

Q ss_pred             EEEEecCcchHHHHHHHHHHhCC--CEEEEEeCCCCc--c---cccCCCCCccccCcccccCcchHHhhccC--CCEEEE
Q 017977           52 TVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSK--A---ELIFPGKKTRFFPGVMIAEEPQWRDCIQG--STAVVN  122 (363)
Q Consensus        52 ~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~--~---~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--~d~Vi~  122 (363)
                      +|+|||||||||++++++|++.|  ++|++++|....  .   ...... ....+..+|+.|.+++.+++++  +|+|||
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~   79 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDN-PRYRFVKGDIGDRELVSRLFTEHQPDAVVH   79 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccC-CCcEEEEcCCcCHHHHHHHHhhcCCCEEEE
Confidence            58999999999999999999987  789998874321  1   111111 1112445799999999999987  899999


Q ss_pred             ccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCC-CeEEEeccceecCC----cccccccCCCcchhhhhhhc
Q 017977          123 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVR-PSVLELVKPKYLMR----AAHQEMITWLSDYCAKVYCL  197 (363)
Q Consensus       123 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~v~~SS~~~~yg~----~~~~e~~~~~~~~~~~~~~~  197 (363)
                      +|+... ........+.++++|+.++.+++++|.+  ...+ ++|++||. .+||.    .+++|..+..+.        
T Consensus        80 ~a~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~~~i~~Ss~-~v~g~~~~~~~~~e~~~~~~~--------  147 (317)
T TIGR01181        80 FAAESH-VDRSISGPAAFIETNVVGTYTLLEAVRK--YWHEFRFHHISTD-EVYGDLEKGDAFTETTPLAPS--------  147 (317)
T ss_pred             cccccC-chhhhhCHHHHHHHHHHHHHHHHHHHHh--cCCCceEEEeecc-ceeCCCCCCCCcCCCCCCCCC--------
Confidence            998642 2223345677899999999999999988  4333 79999998 88981    246666543221        


Q ss_pred             ccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHH--HHHhCCCC---CCCCCccccccHHHHHHH
Q 017977          198 VSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNL  272 (363)
Q Consensus       198 ~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~D~a~a  272 (363)
                      ..|+.+|+..+........ ..+++++++||+.+||+.... ..+++.+  ....+.++   +++++.++++|++|+|++
T Consensus       148 ~~Y~~sK~~~e~~~~~~~~-~~~~~~~i~R~~~i~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~  225 (317)
T TIGR01181       148 SPYSASKAASDHLVRAYHR-TYGLPALITRCSNNYGPYQFP-EKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRA  225 (317)
T ss_pred             CchHHHHHHHHHHHHHHHH-HhCCCeEEEEeccccCCCCCc-ccHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHH
Confidence            2255556544444333322 348999999999999997532 2333332  33445443   677788999999999999


Q ss_pred             HHHHhcCCCCCceEEeeCCCCcCHHHHHHHHHHHhCCCCC-CCCcHHHHHHHhccCceeeecCcccChhhHH-HcCCCcc
Q 017977          273 IYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSW-LPVPEFALKAVLGEGAFVVLEGQRVVPARAK-ELGFPFK  350 (363)
Q Consensus       273 ~~~~~~~~~~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~lG~~p~  350 (363)
                      +..++++...+++||++++++++++|+++.+.+.+|.+.. +....        .. .........+++|++ .|||.|+
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~--------~~-~~~~~~~~~~~~k~~~~lG~~p~  296 (317)
T TIGR01181       226 IYLVLEKGRVGETYNIGGGNERTNLEVVETILELLGKDEDLITHVE--------DR-PGHDRRYAIDASKIKRELGWAPK  296 (317)
T ss_pred             HHHHHcCCCCCceEEeCCCCceeHHHHHHHHHHHhCCCcccccccC--------CC-ccchhhhcCCHHHHHHHhCCCCC
Confidence            9999987655679999999999999999999999997521 11100        00 000122346789996 5899999


Q ss_pred             cccHHHHHHHHhC
Q 017977          351 YRYVKDALKAIMS  363 (363)
Q Consensus       351 ~~~~~~~l~~~~~  363 (363)
                      ++ ++++++++++
T Consensus       297 ~~-~~~~i~~~~~  308 (317)
T TIGR01181       297 YT-FEEGLRKTVQ  308 (317)
T ss_pred             Cc-HHHHHHHHHH
Confidence            97 9999998863

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PLN00016 RNA-binding protein; Provisional

Probab=100.00  E-value=1.4e-33  Score=259.36  Aligned_cols=276  Identities=19%  Similarity=0.218  Sum_probs=187.3

Q ss_pred             CCCCCCCccEEEEe----cCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCC---------CCccccCcccccCcch
Q 017977           43 DHTQKASQMTVSVT----GATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG---------KKTRFFPGVMIAEEPQ  109 (363)
Q Consensus        43 ~~~~~~~~~~vlVt----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~---------~~~~~~~~~d~~~~~~  109 (363)
                      ...+..++|+||||    |||||||++|+++|+++||+|++++|+..........         ........+|+.|   
T Consensus        45 ~~~~~~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d---  121 (378)
T PLN00016         45 AAAAAVEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPAD---  121 (378)
T ss_pred             hhhcccccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHH---
Confidence            33444556799999    9999999999999999999999999987543221100         0001123345544   


Q ss_pred             HHhhc--cCCCEEEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC---Cccccccc
Q 017977          110 WRDCI--QGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM---RAAHQEMI  184 (363)
Q Consensus       110 ~~~~~--~~~d~Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg---~~~~~e~~  184 (363)
                      +.+++  .++|+|||+++.                 +..++.+++++|++  .++++|||+||. ++|+   ..+..|..
T Consensus       122 ~~~~~~~~~~d~Vi~~~~~-----------------~~~~~~~ll~aa~~--~gvkr~V~~SS~-~vyg~~~~~p~~E~~  181 (378)
T PLN00016        122 VKSKVAGAGFDVVYDNNGK-----------------DLDEVEPVADWAKS--PGLKQFLFCSSA-GVYKKSDEPPHVEGD  181 (378)
T ss_pred             HHhhhccCCccEEEeCCCC-----------------CHHHHHHHHHHHHH--cCCCEEEEEccH-hhcCCCCCCCCCCCC
Confidence            44444  478999999763                 13457799999998  799999999999 8998   23455544


Q ss_pred             CCCcchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHH--HHHhCCCC---CCCCC
Q 017977          185 TWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL---GSGQQ  259 (363)
Q Consensus       185 ~~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~--~~~~~~~~---~~~~~  259 (363)
                      +..+..            +|+..+..   .  ...+++++++||+++||+....  .+...+  ....+.++   +.+.+
T Consensus       182 ~~~p~~------------sK~~~E~~---l--~~~~l~~~ilRp~~vyG~~~~~--~~~~~~~~~~~~~~~i~~~g~g~~  242 (378)
T PLN00016        182 AVKPKA------------GHLEVEAY---L--QKLGVNWTSFRPQYIYGPGNNK--DCEEWFFDRLVRGRPVPIPGSGIQ  242 (378)
T ss_pred             cCCCcc------------hHHHHHHH---H--HHcCCCeEEEeceeEECCCCCC--chHHHHHHHHHcCCceeecCCCCe
Confidence            332211            12222222   1  2248999999999999997532  122211  33445443   56788


Q ss_pred             ccccccHHHHHHHHHHHhcCCC-CCceEEeeCCCCcCHHHHHHHHHHHhCCCCCC-CCcHHHHHHHhccCc--eeeecCc
Q 017977          260 WFSWIHLDDIVNLIYEALSNPS-YRGVINGTAPNPVRLAEMCDHLGNVLGRPSWL-PVPEFALKAVLGEGA--FVVLEGQ  335 (363)
Q Consensus       260 ~~~~i~v~D~a~a~~~~~~~~~-~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~--~~~~~~~  335 (363)
                      .++++|++|+|++++.++.++. .+++||+++++.+++.|+++.+.+.+|.+..+ ..+.....  .+...  .......
T Consensus       243 ~~~~i~v~Dva~ai~~~l~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~i~~~~~~~~~--~~~~~~~p~~~~~~  320 (378)
T PLN00016        243 LTQLGHVKDLASMFALVVGNPKAAGQIFNIVSDRAVTFDGMAKACAKAAGFPEEIVHYDPKAVG--FGAKKAFPFRDQHF  320 (378)
T ss_pred             eeceecHHHHHHHHHHHhcCccccCCEEEecCCCccCHHHHHHHHHHHhCCCCceeecCccccC--cccccccccccccc
Confidence            8999999999999999998765 45699999999999999999999999987422 22211110  01000  0011223


Q ss_pred             ccChhhHHH-cCCCcccccHHHHHHHHhC
Q 017977          336 RVVPARAKE-LGFPFKYRYVKDALKAIMS  363 (363)
Q Consensus       336 ~~~~~k~~~-lG~~p~~~~~~~~l~~~~~  363 (363)
                      ..+++|+++ |||+|+++ ++|+|+++++
T Consensus       321 ~~d~~ka~~~LGw~p~~~-l~egl~~~~~  348 (378)
T PLN00016        321 FASPRKAKEELGWTPKFD-LVEDLKDRYE  348 (378)
T ss_pred             ccCHHHHHHhcCCCCCCC-HHHHHHHHHH
Confidence            357899965 89999997 9999998863

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=100.00  E-value=1.6e-32  Score=243.83  Aligned_cols=272  Identities=17%  Similarity=0.134  Sum_probs=194.1

Q ss_pred             EEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCC--CEEEEccCCCCC
Q 017977           52 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGS--TAVVNLAGTPIG  129 (363)
Q Consensus        52 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~--d~Vi~~a~~~~~  129 (363)
                      ||||||||||||++|+++|+++|++|++++|.                 .+|+.+.+++.++++++  |+|||+|+... 
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~-----------------~~d~~~~~~~~~~~~~~~~d~vi~~a~~~~-   62 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS-----------------QLDLTDPEALERLLRAIRPDAVVNTAAYTD-   62 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc-----------------ccCCCCHHHHHHHHHhCCCCEEEECCcccc-
Confidence            58999999999999999999999999999985                 25888999999988865  99999998642 


Q ss_pred             CCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC---CcccccccCCCcchhhhhhhcccchhhHHH
Q 017977          130 TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM---RAAHQEMITWLSDYCAKVYCLVSFNRGVLV  206 (363)
Q Consensus       130 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg---~~~~~e~~~~~~~~~~~~~~~~~y~~~k~~  206 (363)
                      ...........+++|+.++.++++++.+  .+. ++|++||. ++|+   ..+++|+.+..+.        ..|+.+|..
T Consensus        63 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~-~~v~~Ss~-~vy~~~~~~~~~E~~~~~~~--------~~Y~~~K~~  130 (287)
T TIGR01214        63 VDGAESDPEKAFAVNALAPQNLARAAAR--HGA-RLVHISTD-YVFDGEGKRPYREDDATNPL--------NVYGQSKLA  130 (287)
T ss_pred             ccccccCHHHHHHHHHHHHHHHHHHHHH--cCC-eEEEEeee-eeecCCCCCCCCCCCCCCCc--------chhhHHHHH
Confidence            2223334667889999999999999998  554 79999998 8997   3567777654321        124444533


Q ss_pred             HHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHH-H-HHHhCCCC-CCCCCccccccHHHHHHHHHHHhcCCC-C
Q 017977          207 CREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPL-F-MMFAGGPL-GSGQQWFSWIHLDDIVNLIYEALSNPS-Y  282 (363)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~-~-~~~~~~~~-~~~~~~~~~i~v~D~a~a~~~~~~~~~-~  282 (363)
                      .+....   .  .+.+++++||+.+||+....  .+... + ....+.++ ..+++.++++|++|+|+++..++..+. .
T Consensus       131 ~E~~~~---~--~~~~~~ilR~~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~  203 (287)
T TIGR01214       131 GEQAIR---A--AGPNALIVRTSWLYGGGGGR--NFVRTMLRLAGRGEELRVVDDQIGSPTYAKDLARVIAALLQRLARA  203 (287)
T ss_pred             HHHHHH---H--hCCCeEEEEeeecccCCCCC--CHHHHHHHHhhcCCCceEecCCCcCCcCHHHHHHHHHHHHhhccCC
Confidence            332222   1  26799999999999997531  22222 2 22333343 233467899999999999999998763 5


Q ss_pred             CceEEeeCCCCcCHHHHHHHHHHHhCCCCC-CCCcHH--HHHHHhccCceeeecCcccChhhHHH-cCCCcccccHHHHH
Q 017977          283 RGVINGTAPNPVRLAEMCDHLGNVLGRPSW-LPVPEF--ALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYRYVKDAL  358 (363)
Q Consensus       283 ~g~~~i~~~~~~s~~el~~~i~~~~g~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~k~~~-lG~~p~~~~~~~~l  358 (363)
                      +++||+++++.+++.|+++.+.+.+|.+.. ++.|..  .....+... ........++++|+++ +||++ . +++++|
T Consensus       204 ~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~lg~~~-~-~~~~~l  280 (287)
T TIGR01214       204 RGVYHLANSGQCSWYEFAQAIFEEAGADGLLLHPQEVKPISSKEYPRP-ARRPAYSVLDNTKLVKTLGTPL-P-HWREAL  280 (287)
T ss_pred             CCeEEEECCCCcCHHHHHHHHHHHhCcccccccCceeEeecHHHcCCC-CCCCCccccchHHHHHHcCCCC-c-cHHHHH
Confidence            779999999999999999999999997632 221110  000001110 0111335678999976 89955 4 599999


Q ss_pred             HHHhC
Q 017977          359 KAIMS  363 (363)
Q Consensus       359 ~~~~~  363 (363)
                      +++++
T Consensus       281 ~~~~~  285 (287)
T TIGR01214       281 RAYLQ  285 (287)
T ss_pred             HHHHh
Confidence            99874

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=100.00  E-value=4.1e-32  Score=229.65  Aligned_cols=291  Identities=20%  Similarity=0.201  Sum_probs=217.0

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcc-------cccCCCCCccccCcccccCcchHHhhcc--CCCEEE
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-------ELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVV  121 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-------~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~Vi  121 (363)
                      ++||||||+||||+|.+-+|+++|+.|.+++.-....       ..+..+.....+..+|+.|.+.+++.|+  +.|.|+
T Consensus         3 ~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~V~   82 (343)
T KOG1371|consen    3 KHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDAVM   82 (343)
T ss_pred             cEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCceEE
Confidence            5899999999999999999999999999998754331       2222223334466789999999999997  579999


Q ss_pred             EccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC---CcccccccCCCcchhhhhhhcc
Q 017977          122 NLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM---RAAHQEMITWLSDYCAKVYCLV  198 (363)
Q Consensus       122 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg---~~~~~e~~~~~~~~~~~~~~~~  198 (363)
                      |+|+. -....+.+++..+...|+.++.++++.+++  .+++.+||.||+ .+||   ..|++|+.+...+       .+
T Consensus        83 Hfa~~-~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~--~~~~~~V~sssa-tvYG~p~~ip~te~~~t~~p-------~~  151 (343)
T KOG1371|consen   83 HFAAL-AAVGESMENPLSYYHNNIAGTLNLLEVMKA--HNVKALVFSSSA-TVYGLPTKVPITEEDPTDQP-------TN  151 (343)
T ss_pred             eehhh-hccchhhhCchhheehhhhhHHHHHHHHHH--cCCceEEEecce-eeecCcceeeccCcCCCCCC-------CC
Confidence            99997 445677888899999999999999999999  789999999999 9999   6688888774311       12


Q ss_pred             cchhhHHHHHHHHHHHhccCCCceEEEEeeceEEe--CCC-------CcccchHHHH---HHHh-------CCCC--CCC
Q 017977          199 SFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLG--KDG-------GALAKMIPLF---MMFA-------GGPL--GSG  257 (363)
Q Consensus       199 ~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g--~~~-------~~~~~~~~~~---~~~~-------~~~~--~~~  257 (363)
                      .|+++|+..++......... ++.+++||..+++|  |.+       +...++.+..   ....       +.++  .++
T Consensus       152 pyg~tK~~iE~i~~d~~~~~-~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p~v~~vaigr~~~l~v~g~d~~t~dg  230 (343)
T KOG1371|consen  152 PYGKTKKAIEEIIHDYNKAY-GWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLPYVFQVAIGRRPNLQVVGRDYTTIDG  230 (343)
T ss_pred             cchhhhHHHHHHHHhhhccc-cceEEEEEeccccCccccCccCCCCccCcccccccccchhhcccccceeecCcccccCC
Confidence            24444556666666555544 69999999999999  432       1123333211   1111       1122  466


Q ss_pred             CCccccccHHHHHHHHHHHhcCCC---CCceEEeeCCCCcCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhccCceeeecC
Q 017977          258 QQWFSWIHLDDIVNLIYEALSNPS---YRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEG  334 (363)
Q Consensus       258 ~~~~~~i~v~D~a~a~~~~~~~~~---~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  334 (363)
                      +..++++|+-|+|+..+.++....   ..++||++.+.+.++.+++.+++++.|++.++++-.    ...++.....   
T Consensus       231 t~vrdyi~v~Dla~~h~~al~k~~~~~~~~i~Nlgtg~g~~V~~lv~a~~k~~g~~~k~~~v~----~R~gdv~~~y---  303 (343)
T KOG1371|consen  231 TIVRDYIHVLDLADGHVAALGKLRGAAEFGVYNLGTGKGSSVLELVTAFEKALGVKIKKKVVP----RRNGDVAFVY---  303 (343)
T ss_pred             CeeecceeeEehHHHHHHHhhccccchheeeEeecCCCCccHHHHHHHHHHHhcCCCCccccC----CCCCCceeee---
Confidence            889999999999999999998765   245999999999999999999999999985433211    1123322222   


Q ss_pred             cccChhhH-HHcCCCcccccHHHHHHHHhC
Q 017977          335 QRVVPARA-KELGFPFKYRYVKDALKAIMS  363 (363)
Q Consensus       335 ~~~~~~k~-~~lG~~p~~~~~~~~l~~~~~  363 (363)
                        .+++++ ++|||+|.+. ++|.++++++
T Consensus       304 --a~~~~a~~elgwk~~~~-iee~c~dlw~  330 (343)
T KOG1371|consen  304 --ANPSKAQRELGWKAKYG-LQEMLKDLWR  330 (343)
T ss_pred             --eChHHHHHHhCCccccC-HHHHHHHHHH
Confidence              235666 6899999998 9999999863

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=100.00  E-value=1.1e-31  Score=242.99  Aligned_cols=290  Identities=17%  Similarity=0.187  Sum_probs=201.7

Q ss_pred             EEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCC---ccccCcccccCcchHHhhcc--CCCEEEEccCC
Q 017977           52 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKK---TRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGT  126 (363)
Q Consensus        52 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~--~~d~Vi~~a~~  126 (363)
                      +||||||+|+||++|++.|+++|++|++++|.............   ......+|+.+.+++.++++  ++|+|||+|+.
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~ag~   80 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEEHKIDAVIHFAGL   80 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHhCCCcEEEECccc
Confidence            58999999999999999999999999998764432211111100   11134578989999988886  68999999996


Q ss_pred             CCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC---CcccccccCCCcchhhhhhhcccchhh
Q 017977          127 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM---RAAHQEMITWLSDYCAKVYCLVSFNRG  203 (363)
Q Consensus       127 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg---~~~~~e~~~~~~~~~~~~~~~~~y~~~  203 (363)
                      .... .........++.|+.++.+++++|.+  .+++++|++||. ++|+   ..+++|+.+..+        ...|+.+
T Consensus        81 ~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~~v~~ss~-~~~g~~~~~~~~e~~~~~~--------~~~y~~s  148 (328)
T TIGR01179        81 IAVG-ESVQDPLKYYRNNVVNTLNLLEAMQQ--TGVKKFIFSSSA-AVYGEPSSIPISEDSPLGP--------INPYGRS  148 (328)
T ss_pred             cCcc-hhhcCchhhhhhhHHHHHHHHHHHHh--cCCCEEEEecch-hhcCCCCCCCccccCCCCC--------CCchHHH
Confidence            4322 22334567789999999999999998  778899999988 7888   235666655321        1235555


Q ss_pred             HHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCc--------ccchHHHH-HHHh--CC---------CCCCCCCcccc
Q 017977          204 VLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA--------LAKMIPLF-MMFA--GG---------PLGSGQQWFSW  263 (363)
Q Consensus       204 k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~--------~~~~~~~~-~~~~--~~---------~~~~~~~~~~~  263 (363)
                      |...+...........+++++++||+.+||+....        ...+++.+ ....  ..         +...+.+.++|
T Consensus       149 K~~~e~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  228 (328)
T TIGR01179       149 KLMSERILRDLSKADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDY  228 (328)
T ss_pred             HHHHHHHHHHHHHhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEEee
Confidence            65555444443333248999999999999985321        12233333 2222  11         12355677899


Q ss_pred             ccHHHHHHHHHHHhcCC---CCCceEEeeCCCCcCHHHHHHHHHHHhCCCCCCC-CcHHHHHHHhccCceeeecCcccCh
Q 017977          264 IHLDDIVNLIYEALSNP---SYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLP-VPEFALKAVLGEGAFVVLEGQRVVP  339 (363)
Q Consensus       264 i~v~D~a~a~~~~~~~~---~~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  339 (363)
                      ||++|+++++..++...   ..+++||++++++++++|+++.+.+.+|++..+. .+..     ..+     ......++
T Consensus       229 v~~~D~a~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~ei~~~~~~~~g~~~~~~~~~~~-----~~~-----~~~~~~~~  298 (328)
T TIGR01179       229 IHVMDLADAHLAALEYLLNGGESHVYNLGYGQGFSVLEVIEAFKKVSGVDFPVELAPRR-----PGD-----PASLVADA  298 (328)
T ss_pred             eeHHHHHHHHHHHHhhhhcCCCcceEEcCCCCcccHHHHHHHHHHHhCCCcceEeCCCC-----Ccc-----ccchhcch
Confidence            99999999999998652   2356999999999999999999999999863321 1110     001     01233568


Q ss_pred             hhHHH-cCCCcccccHHHHHHHHhC
Q 017977          340 ARAKE-LGFPFKYRYVKDALKAIMS  363 (363)
Q Consensus       340 ~k~~~-lG~~p~~~~~~~~l~~~~~  363 (363)
                      +|+++ |||+|++++++++|+++++
T Consensus       299 ~~~~~~lg~~p~~~~l~~~~~~~~~  323 (328)
T TIGR01179       299 SKIRRELGWQPKYTDLEIIIKTAWR  323 (328)
T ss_pred             HHHHHHhCCCCCcchHHHHHHHHHH
Confidence            88864 8999999779999998863

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PLN02686 cinnamoyl-CoA reductase

Probab=100.00  E-value=1e-31  Score=245.52  Aligned_cols=293  Identities=14%  Similarity=0.086  Sum_probs=193.3

Q ss_pred             CCCCCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCC---------CCccccCcccccCcchHHhhcc
Q 017977           45 TQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG---------KKTRFFPGVMIAEEPQWRDCIQ  115 (363)
Q Consensus        45 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~---------~~~~~~~~~d~~~~~~~~~~~~  115 (363)
                      ....++|+||||||+||||++|+++|+++|++|+++.|+......+...         .....+..+|+.|.+++.++++
T Consensus        48 ~~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~  127 (367)
T PLN02686         48 GADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFD  127 (367)
T ss_pred             ccCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHH
Confidence            3445567999999999999999999999999999998876443221110         0011244579999999999999


Q ss_pred             CCCEEEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccc-eecCC-------cccccccCCC
Q 017977          116 GSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKP-KYLMR-------AAHQEMITWL  187 (363)
Q Consensus       116 ~~d~Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~-~~yg~-------~~~~e~~~~~  187 (363)
                      ++|.|||+|+...... .........++|+.++.+++++|.+. .+++++||+||.. .+||.       ..++|+.+..
T Consensus       128 ~~d~V~hlA~~~~~~~-~~~~~~~~~~~nv~gt~~llea~~~~-~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~  205 (367)
T PLN02686        128 GCAGVFHTSAFVDPAG-LSGYTKSMAELEAKASENVIEACVRT-ESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSD  205 (367)
T ss_pred             hccEEEecCeeecccc-cccccchhhhhhHHHHHHHHHHHHhc-CCccEEEEeccHHHhcccccCCCCCCcccCCCCCCC
Confidence            9999999998742221 11122356778999999999999982 2799999999974 57761       2245543221


Q ss_pred             cchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHH
Q 017977          188 SDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLD  267 (363)
Q Consensus       188 ~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  267 (363)
                      .....  ...+.|+.+|...+...... ....|++++++||++||||+...... ........+.....++..++++||+
T Consensus       206 ~~~~~--~p~~~Y~~sK~~~E~~~~~~-~~~~gl~~v~lRp~~vyGp~~~~~~~-~~~~~~~~g~~~~~g~g~~~~v~V~  281 (367)
T PLN02686        206 ESFCR--DNKLWYALGKLKAEKAAWRA-ARGKGLKLATICPALVTGPGFFRRNS-TATIAYLKGAQEMLADGLLATADVE  281 (367)
T ss_pred             hhhcc--cccchHHHHHHHHHHHHHHH-HHhcCceEEEEcCCceECCCCCCCCC-hhHHHHhcCCCccCCCCCcCeEEHH
Confidence            11100  01123677775555544433 33359999999999999997532111 1112333332211223345799999


Q ss_pred             HHHHHHHHHhcCC---CCCceEEeeCCCCcCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhccCceeeecCcccChhhHH-
Q 017977          268 DIVNLIYEALSNP---SYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAK-  343 (363)
Q Consensus       268 D~a~a~~~~~~~~---~~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~-  343 (363)
                      |+|++++.+++..   ..+++| ++++++++++|+++.+.+.+|.+.........   ..++     .....++++|++ 
T Consensus       282 Dva~A~~~al~~~~~~~~~~~y-i~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~---~~~d-----~~~~~~d~~kl~~  352 (367)
T PLN02686        282 RLAEAHVCVYEAMGNKTAFGRY-ICFDHVVSREDEAEELARQIGLPINKIAGNSS---SDDT-----PARFELSNKKLSR  352 (367)
T ss_pred             HHHHHHHHHHhccCCCCCCCcE-EEeCCCccHHHHHHHHHHHcCCCCCcCCCchh---hcCC-----cccccccHHHHHH
Confidence            9999999999752   244578 88889999999999999999976322111110   0111     134556799996 


Q ss_pred             HcCCCcccc
Q 017977          344 ELGFPFKYR  352 (363)
Q Consensus       344 ~lG~~p~~~  352 (363)
                      .|||.|+-.
T Consensus       353 ~l~~~~~~~  361 (367)
T PLN02686        353 LMSRTRRCC  361 (367)
T ss_pred             HHHHhhhcc
Confidence            489999754

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=100.00  E-value=6.8e-32  Score=242.92  Aligned_cols=271  Identities=18%  Similarity=0.234  Sum_probs=188.5

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCC--CEEEEEeCCCCcccccCCC--CCccccCcccccCcchHHhhccCCCEEEEcc
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPG--KKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA  124 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a  124 (363)
                      ++|+||||||+||||++|+++|+++|  ++|++++|+......+...  .....+..+|+.|.+++.++++++|+|||+|
T Consensus         3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~A   82 (324)
T TIGR03589         3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVVHAA   82 (324)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEEECc
Confidence            35799999999999999999999986  7999999876543211100  0112245679999999999999999999999


Q ss_pred             CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhcccchhhH
Q 017977          125 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRGV  204 (363)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~~y~~~k  204 (363)
                      +... ......++...+++|+.++.++++++.+  .+++++|++||. ..+         .+.+.|..          +|
T Consensus        83 g~~~-~~~~~~~~~~~~~~Nv~g~~~ll~aa~~--~~~~~iV~~SS~-~~~---------~p~~~Y~~----------sK  139 (324)
T TIGR03589        83 ALKQ-VPAAEYNPFECIRTNINGAQNVIDAAID--NGVKRVVALSTD-KAA---------NPINLYGA----------TK  139 (324)
T ss_pred             ccCC-CchhhcCHHHHHHHHHHHHHHHHHHHHH--cCCCEEEEEeCC-CCC---------CCCCHHHH----------HH
Confidence            9642 2233445678999999999999999999  788899999987 211         12233444          44


Q ss_pred             HHHHHHHHHH--hccCCCceEEEEeeceEEeCCCCcccchHHHH--HHHhCC---CCCCCCCccccccHHHHHHHHHHHh
Q 017977          205 LVCREWEGTA--LKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGG---PLGSGQQWFSWIHLDDIVNLIYEAL  277 (363)
Q Consensus       205 ~~~~~~~~~~--~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~--~~~~~~---~~~~~~~~~~~i~v~D~a~a~~~~~  277 (363)
                      ...+......  +....|++++++||+++|||.+.    +++.+  ....+.   ++.++.+.++|+|++|+|++++.++
T Consensus       140 ~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~~----~i~~~~~~~~~~~~~~~i~~~~~~r~~i~v~D~a~a~~~al  215 (324)
T TIGR03589       140 LASDKLFVAANNISGSKGTRFSVVRYGNVVGSRGS----VVPFFKSLKEEGVTELPITDPRMTRFWITLEQGVNFVLKSL  215 (324)
T ss_pred             HHHHHHHHHHHhhccccCcEEEEEeecceeCCCCC----cHHHHHHHHHhCCCCeeeCCCCceEeeEEHHHHHHHHHHHH
Confidence            3333333222  22234899999999999998753    33333  222333   3466778899999999999999999


Q ss_pred             cCCCCCceEEeeCCCCcCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhccCceeeecCcccChhhHH-HcCCCcccccHHH
Q 017977          278 SNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAK-ELGFPFKYRYVKD  356 (363)
Q Consensus       278 ~~~~~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~lG~~p~~~~~~~  356 (363)
                      ++...+.+| ++.+..+++.|+++.+.+..+... .+.+       .++.    .....++.+|++ +|||+|+++ +++
T Consensus       216 ~~~~~~~~~-~~~~~~~sv~el~~~i~~~~~~~~-~~~~-------~g~~----~~~~~~~~~~~~~~lg~~~~~~-l~~  281 (324)
T TIGR03589       216 ERMLGGEIF-VPKIPSMKITDLAEAMAPECPHKI-VGIR-------PGEK----LHEVMITEDDARHTYELGDYYA-ILP  281 (324)
T ss_pred             hhCCCCCEE-ccCCCcEEHHHHHHHHHhhCCeeE-eCCC-------CCch----hHhhhcChhhhhhhcCCCCeEE-Ecc
Confidence            864333466 566667999999999999764431 0111       0000    011224688885 599999997 999


Q ss_pred             HHHH
Q 017977          357 ALKA  360 (363)
Q Consensus       357 ~l~~  360 (363)
                      +++.
T Consensus       282 ~~~~  285 (324)
T TIGR03589       282 SISF  285 (324)
T ss_pred             cccc
Confidence            8753

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.98  E-value=1.2e-32  Score=242.55  Aligned_cols=268  Identities=18%  Similarity=0.209  Sum_probs=179.4

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc--CCCEEEEccCCCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGTPI  128 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~Vi~~a~~~~  128 (363)
                      ||||||||+|+||++|+++|.++|++|+++.|.                 .+|+.|.+.+.+.++  ++|+|||||+. .
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~-----------------~~dl~d~~~~~~~~~~~~pd~Vin~aa~-~   62 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERGYEVIATSRS-----------------DLDLTDPEAVAKLLEAFKPDVVINCAAY-T   62 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT-----------------CS-TTSHHHHHHHHHHH--SEEEE------
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch-----------------hcCCCCHHHHHHHHHHhCCCeEecccee-e
Confidence            799999999999999999999999999999877                 278999999988887  47999999997 4


Q ss_pred             CCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC---CcccccccCCCcchhhhhhhcccchhhHH
Q 017977          129 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM---RAAHQEMITWLSDYCAKVYCLVSFNRGVL  205 (363)
Q Consensus       129 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg---~~~~~e~~~~~~~~~~~~~~~~~y~~~k~  205 (363)
                      ....++.+++..+++|+.++.+|+++|..  .+. ++||+||. .||+   ..+++|++++.|.        +.|+++|+
T Consensus        63 ~~~~ce~~p~~a~~iN~~~~~~la~~~~~--~~~-~li~~STd-~VFdG~~~~~y~E~d~~~P~--------~~YG~~K~  130 (286)
T PF04321_consen   63 NVDACEKNPEEAYAINVDATKNLAEACKE--RGA-RLIHISTD-YVFDGDKGGPYTEDDPPNPL--------NVYGRSKL  130 (286)
T ss_dssp             -HHHHHHSHHHHHHHHTHHHHHHHHHHHH--CT--EEEEEEEG-GGS-SSTSSSB-TTS----S--------SHHHHHHH
T ss_pred             cHHhhhhChhhhHHHhhHHHHHHHHHHHH--cCC-cEEEeecc-EEEcCCcccccccCCCCCCC--------CHHHHHHH
Confidence            55567778899999999999999999999  666 59999999 9998   4568888775442        12444453


Q ss_pred             HHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHH--HHHhCCCC-CCCCCccccccHHHHHHHHHHHhcCCC-
Q 017977          206 VCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL-GSGQQWFSWIHLDDIVNLIYEALSNPS-  281 (363)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~i~v~D~a~a~~~~~~~~~-  281 (363)
                      ..++.   ....  .-+++|+|++.+||+....   ++..+  ....++++ ...++.+++++++|+|+++..++++.. 
T Consensus       131 ~~E~~---v~~~--~~~~~IlR~~~~~g~~~~~---~~~~~~~~~~~~~~i~~~~d~~~~p~~~~dlA~~i~~l~~~~~~  202 (286)
T PF04321_consen  131 EGEQA---VRAA--CPNALILRTSWVYGPSGRN---FLRWLLRRLRQGEPIKLFDDQYRSPTYVDDLARVILELIEKNLS  202 (286)
T ss_dssp             HHHHH---HHHH---SSEEEEEE-SEESSSSSS---HHHHHHHHHHCTSEEEEESSCEE--EEHHHHHHHHHHHHHHHHH
T ss_pred             HHHHH---HHHh--cCCEEEEecceecccCCCc---hhhhHHHHHhcCCeeEeeCCceeCCEEHHHHHHHHHHHHHhccc
Confidence            33333   3322  2399999999999995433   23222  22344554 455778899999999999999998654 


Q ss_pred             ---CCceEEeeCCCCcCHHHHHHHHHHHhCCCCC-C-CCcHHHHHHHhccCceeeecCcccChhhHHH-cCCCcccccHH
Q 017977          282 ---YRGVINGTAPNPVRLAEMCDHLGNVLGRPSW-L-PVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYRYVK  355 (363)
Q Consensus       282 ---~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lG~~p~~~~~~  355 (363)
                         ..|+||+++++.+|+.|+++.+.+.+|.+.. + +++....    .. ......+..++++|++. +|+++.  +|+
T Consensus       203 ~~~~~Giyh~~~~~~~S~~e~~~~i~~~~~~~~~~i~~~~~~~~----~~-~~~rp~~~~L~~~kl~~~~g~~~~--~~~  275 (286)
T PF04321_consen  203 GASPWGIYHLSGPERVSRYEFAEAIAKILGLDPELIKPVSSSEF----PR-AAPRPRNTSLDCRKLKNLLGIKPP--PWR  275 (286)
T ss_dssp             -GGG-EEEE---BS-EEHHHHHHHHHHHHTHCTTEEEEESSTTS----TT-SSGS-SBE-B--HHHHHCTTS-----BHH
T ss_pred             ccccceeEEEecCcccCHHHHHHHHHHHhCCCCceEEecccccC----CC-CCCCCCcccccHHHHHHccCCCCc--CHH
Confidence               3589999999999999999999999998741 1 1111110    00 01111355678999976 699997  699


Q ss_pred             HHHHHHhC
Q 017977          356 DALKAIMS  363 (363)
Q Consensus       356 ~~l~~~~~  363 (363)
                      ++|+++++
T Consensus       276 ~~l~~~~~  283 (286)
T PF04321_consen  276 EGLEELVK  283 (286)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99999863

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PLN02583 cinnamoyl-CoA reductase

Probab=99.98  E-value=1.3e-30  Score=231.92  Aligned_cols=278  Identities=13%  Similarity=0.092  Sum_probs=190.9

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCccc------ccCCCCCccccCcccccCcchHHhhccCCCEEEEc
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE------LIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNL  123 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~------~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~  123 (363)
                      .++||||||+||||++++++|+++||+|++++|+..+..      .+...........+|+.|.+++.+++.++|.|+|+
T Consensus         6 ~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~~d~v~~~   85 (297)
T PLN02583          6 SKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKGCSGLFCC   85 (297)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcCCCEEEEe
Confidence            358999999999999999999999999999999643211      11111111224457999999999999999999998


Q ss_pred             cCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEecccee-cC-C-----cccccccCCCcchhhhhhh
Q 017977          124 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKY-LM-R-----AAHQEMITWLSDYCAKVYC  196 (363)
Q Consensus       124 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~-yg-~-----~~~~e~~~~~~~~~~~~~~  196 (363)
                      ++.....   ....+.++++|+.++.++++++.+. .+++++|++||.+.+ |+ .     .+++|+.+..+.|...+  
T Consensus        86 ~~~~~~~---~~~~~~~~~~nv~gt~~ll~aa~~~-~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~--  159 (297)
T PLN02583         86 FDPPSDY---PSYDEKMVDVEVRAAHNVLEACAQT-DTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKF--  159 (297)
T ss_pred             CccCCcc---cccHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhc--
Confidence            7653221   1235688999999999999999883 257899999998532 33 1     24666655444443221  


Q ss_pred             cccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHHHHH
Q 017977          197 LVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEA  276 (363)
Q Consensus       197 ~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~  276 (363)
                      ...|+.+|...++........ .+++++++||++||||.......      ...+.....+...+++|||+|+|++++.+
T Consensus       160 ~~~Y~~sK~~aE~~~~~~~~~-~gi~~v~lrp~~v~Gp~~~~~~~------~~~~~~~~~~~~~~~~v~V~Dva~a~~~a  232 (297)
T PLN02583        160 KLWHALAKTLSEKTAWALAMD-RGVNMVSINAGLLMGPSLTQHNP------YLKGAAQMYENGVLVTVDVNFLVDAHIRA  232 (297)
T ss_pred             ccHHHHHHHHHHHHHHHHHHH-hCCcEEEEcCCcccCCCCCCchh------hhcCCcccCcccCcceEEHHHHHHHHHHH
Confidence            123777886666666544433 38999999999999997532111      11222111123346799999999999999


Q ss_pred             hcCCCCCceEEeeCCCCcCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhccCceeeecCcccChhhHHHcCCCc
Q 017977          277 LSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPF  349 (363)
Q Consensus       277 ~~~~~~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~p  349 (363)
                      ++.+...|.|+++++....+.++++++.+.+..-   +.|........+      .....++++|+++|||++
T Consensus       233 l~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~p~~---~~~~~~~~~~~~------~~~~~~~~~k~~~l~~~~  296 (297)
T PLN02583        233 FEDVSSYGRYLCFNHIVNTEEDAVKLAQMLSPLI---PSPPPYEMQGSE------VYQQRIRNKKLNKLMEDF  296 (297)
T ss_pred             hcCcccCCcEEEecCCCccHHHHHHHHHHhCCCC---CCCCcccccCCC------ccccccChHHHHHhCccc
Confidence            9987777799999876566789999999998643   222100000000      134567899999999975

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.98  E-value=5e-31  Score=236.96  Aligned_cols=271  Identities=15%  Similarity=0.131  Sum_probs=187.1

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCCCCCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGT  130 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~~~~~  130 (363)
                      |+|+|||||||+|++|+++|+++||+|++++|+.++...+...  ......+|+.|.+++.++++++|+|||+++..   
T Consensus         1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~~--~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~~---   75 (317)
T CHL00194          1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKEW--GAELVYGDLSLPETLPPSFKGVTAIIDASTSR---   75 (317)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHhhc--CCEEEECCCCCHHHHHHHHCCCCEEEECCCCC---
Confidence            5899999999999999999999999999999987553322211  12245679999999999999999999997642   


Q ss_pred             CCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccc-eecCCcccccccCCCcchhhhhhhcccchhhHHHHHH
Q 017977          131 RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKP-KYLMRAAHQEMITWLSDYCAKVYCLVSFNRGVLVCRE  209 (363)
Q Consensus       131 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~-~~yg~~~~~e~~~~~~~~~~~~~~~~~y~~~k~~~~~  209 (363)
                       .  .....+.++|+.++.+++++|++  .+++++|++||.+ ..|+          ..+|..          +|   .+
T Consensus        76 -~--~~~~~~~~~~~~~~~~l~~aa~~--~gvkr~I~~Ss~~~~~~~----------~~~~~~----------~K---~~  127 (317)
T CHL00194         76 -P--SDLYNAKQIDWDGKLALIEAAKA--AKIKRFIFFSILNAEQYP----------YIPLMK----------LK---SD  127 (317)
T ss_pred             -C--CCccchhhhhHHHHHHHHHHHHH--cCCCEEEEeccccccccC----------CChHHH----------HH---HH
Confidence             1  12345678899999999999999  8999999999863 1111          112222          22   22


Q ss_pred             HHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCC--CCCCCccccccHHHHHHHHHHHhcCCC-CCceE
Q 017977          210 WEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPL--GSGQQWFSWIHLDDIVNLIYEALSNPS-YRGVI  286 (363)
Q Consensus       210 ~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~v~D~a~a~~~~~~~~~-~~g~~  286 (363)
                      .+...  ...+++++++||+.+|+.-...  ...   ....+.++  ..+.+.+++||++|+|++++.++.++. .+++|
T Consensus       128 ~e~~l--~~~~l~~tilRp~~~~~~~~~~--~~~---~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~  200 (317)
T CHL00194        128 IEQKL--KKSGIPYTIFRLAGFFQGLISQ--YAI---PILEKQPIWITNESTPISYIDTQDAAKFCLKSLSLPETKNKTF  200 (317)
T ss_pred             HHHHH--HHcCCCeEEEeecHHhhhhhhh--hhh---hhccCCceEecCCCCccCccCHHHHHHHHHHHhcCccccCcEE
Confidence            22222  2358999999999887531110  011   11222332  455677899999999999999998765 45699


Q ss_pred             EeeCCCCcCHHHHHHHHHHHhCCC-CCCCCcHHHHHHHh---c---cCcee---------e-ec-CcccChhhHH-HcCC
Q 017977          287 NGTAPNPVRLAEMCDHLGNVLGRP-SWLPVPEFALKAVL---G---EGAFV---------V-LE-GQRVVPARAK-ELGF  347 (363)
Q Consensus       287 ~i~~~~~~s~~el~~~i~~~~g~~-~~~~~~~~~~~~~~---~---~~~~~---------~-~~-~~~~~~~k~~-~lG~  347 (363)
                      |+++++.+|++|+++.+.+.+|++ ...++|.+..+...   .   .....         . .. +.-.+.+++. .+|+
T Consensus       201 ni~g~~~~s~~el~~~~~~~~g~~~~~~~vp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~  280 (317)
T CHL00194        201 PLVGPKSWNSSEIISLCEQLSGQKAKISRVPLFLLKLLRQITGFFEWTWNISDRLAFVEILNTSNNFSSSMAELYKIFKI  280 (317)
T ss_pred             EecCCCccCHHHHHHHHHHHhCCCCeEEeCCHHHHHHHHHHHhhcccchhhHHHHHHHHHHhcCCCcCCCHHHHHHHhCC
Confidence            999999999999999999999987 33456665553321   1   10000         0 11 1112345564 4899


Q ss_pred             Ccc--cccHHHHHHHHh
Q 017977          348 PFK--YRYVKDALKAIM  362 (363)
Q Consensus       348 ~p~--~~~~~~~l~~~~  362 (363)
                      .|.  .+ +++++++.+
T Consensus       281 ~p~~~~~-~~~~~~~~~  296 (317)
T CHL00194        281 DPNELIS-LEDYFQEYF  296 (317)
T ss_pred             Chhhhhh-HHHHHHHHH
Confidence            984  44 899998875

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.97  E-value=2.2e-30  Score=220.09  Aligned_cols=268  Identities=18%  Similarity=0.155  Sum_probs=205.6

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc--CCCEEEEccCCCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGTPI  128 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~Vi~~a~~~~  128 (363)
                      |+|||||++|++|++|++.|. .+++|++++|..                 +|++|.+.+.+.+.  .+|+|||+|+. .
T Consensus         1 M~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~-----------------~Ditd~~~v~~~i~~~~PDvVIn~AAy-t   61 (281)
T COG1091           1 MKILITGANGQLGTELRRALP-GEFEVIATDRAE-----------------LDITDPDAVLEVIRETRPDVVINAAAY-T   61 (281)
T ss_pred             CcEEEEcCCChHHHHHHHHhC-CCceEEeccCcc-----------------ccccChHHHHHHHHhhCCCEEEECccc-c
Confidence            469999999999999999999 779999999866                 79999999999997  46999999998 4


Q ss_pred             CCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC---CcccccccCCCcchhhhhhhcccchhhHH
Q 017977          129 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM---RAAHQEMITWLSDYCAKVYCLVSFNRGVL  205 (363)
Q Consensus       129 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg---~~~~~e~~~~~~~~~~~~~~~~~y~~~k~  205 (363)
                      .++.++..++..+.+|..++.++.++|.+  .|.+ +||+||- .||+   ..++.|++++.|.-        .|+++|+
T Consensus        62 ~vD~aE~~~e~A~~vNa~~~~~lA~aa~~--~ga~-lVhiSTD-yVFDG~~~~~Y~E~D~~~P~n--------vYG~sKl  129 (281)
T COG1091          62 AVDKAESEPELAFAVNATGAENLARAAAE--VGAR-LVHISTD-YVFDGEKGGPYKETDTPNPLN--------VYGRSKL  129 (281)
T ss_pred             ccccccCCHHHHHHhHHHHHHHHHHHHHH--hCCe-EEEeecc-eEecCCCCCCCCCCCCCCChh--------hhhHHHH
Confidence            56777888899999999999999999999  6765 9999999 9998   45799988865431        1444454


Q ss_pred             HHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHH-HHhCCCC-CCCCCccccccHHHHHHHHHHHhcCCCCC
Q 017977          206 VCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFM-MFAGGPL-GSGQQWFSWIHLDDIVNLIYEALSNPSYR  283 (363)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~i~v~D~a~a~~~~~~~~~~~  283 (363)
                      +.++...     ..+-+.+|+|.+++||..++++..  ..++ ...++++ ...++..++++..|+|+++..++......
T Consensus       130 ~GE~~v~-----~~~~~~~I~Rtswv~g~~g~nFv~--tml~la~~~~~l~vv~Dq~gsPt~~~dlA~~i~~ll~~~~~~  202 (281)
T COG1091         130 AGEEAVR-----AAGPRHLILRTSWVYGEYGNNFVK--TMLRLAKEGKELKVVDDQYGSPTYTEDLADAILELLEKEKEG  202 (281)
T ss_pred             HHHHHHH-----HhCCCEEEEEeeeeecCCCCCHHH--HHHHHhhcCCceEEECCeeeCCccHHHHHHHHHHHHhccccC
Confidence            4333333     236789999999999998744322  2222 2344455 56678889999999999999999888777


Q ss_pred             ceEEeeCCCCcCHHHHHHHHHHHhCCCCCCC--CcHHHHHHHhccCceeeecCcccChhhHHH-cCCCcccccHHHHHHH
Q 017977          284 GVINGTAPNPVRLAEMCDHLGNVLGRPSWLP--VPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYRYVKDALKA  360 (363)
Q Consensus       284 g~~~i~~~~~~s~~el~~~i~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lG~~p~~~~~~~~l~~  360 (363)
                      |+||+++...+||-|+++.|.+.++.+..+.  .....    +... ........+++.|+++ +|+.|.  .|++++++
T Consensus       203 ~~yH~~~~g~~Swydfa~~I~~~~~~~~~v~~~~~~~~----~~~~-a~RP~~S~L~~~k~~~~~g~~~~--~w~~~l~~  275 (281)
T COG1091         203 GVYHLVNSGECSWYEFAKAIFEEAGVDGEVIEPIASAE----YPTP-AKRPANSSLDTKKLEKAFGLSLP--EWREALKA  275 (281)
T ss_pred             cEEEEeCCCcccHHHHHHHHHHHhCCCccccccccccc----cCcc-CCCCcccccchHHHHHHhCCCCc--cHHHHHHH
Confidence            7999999988999999999999999663221  11110    0000 0011234577899865 799887  69999999


Q ss_pred             HhC
Q 017977          361 IMS  363 (363)
Q Consensus       361 ~~~  363 (363)
                      +++
T Consensus       276 ~~~  278 (281)
T COG1091         276 LLD  278 (281)
T ss_pred             HHh
Confidence            874

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.97  E-value=4.7e-30  Score=225.69  Aligned_cols=301  Identities=19%  Similarity=0.212  Sum_probs=210.5

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCC--CEEEEEeCCCCcccccCC----CCCccccCcccccCcchHHhhccCCCEEEE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQGSTAVVN  122 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~  122 (363)
                      .+.+|+||||+||+|+||+++|++++  .+|++++..+.......+    .........+|+.|..++..+++++ .|+|
T Consensus         3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~~~-~Vvh   81 (361)
T KOG1430|consen    3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQGA-VVVH   81 (361)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhccCc-eEEE
Confidence            45689999999999999999999998  899999998863222111    1222235568999999999999999 8888


Q ss_pred             ccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCc---ccccccCCCcchhhhhhhccc
Q 017977          123 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRA---AHQEMITWLSDYCAKVYCLVS  199 (363)
Q Consensus       123 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~---~~~e~~~~~~~~~~~~~~~~~  199 (363)
                      +|+.... .......+.++++|+.||.+++++|.+  .+++++||+||..-+++..   .-+|+.|....+.      ..
T Consensus        82 ~aa~~~~-~~~~~~~~~~~~vNV~gT~nvi~~c~~--~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~~~~------d~  152 (361)
T KOG1430|consen   82 CAASPVP-DFVENDRDLAMRVNVNGTLNVIEACKE--LGVKRLIYTSSAYVVFGGEPIINGDESLPYPLKHI------DP  152 (361)
T ss_pred             eccccCc-cccccchhhheeecchhHHHHHHHHHH--hCCCEEEEecCceEEeCCeecccCCCCCCCccccc------cc
Confidence            8886433 344445788999999999999999999  8999999999995344422   2344433221211      23


Q ss_pred             chhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCC---CCCCCCccccccHHHHHHHHHHH
Q 017977          200 FNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGP---LGSGQQWFSWIHLDDIVNLIYEA  276 (363)
Q Consensus       200 y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~v~D~a~a~~~~  276 (363)
                      |+.+|..+++...++... .++..+.|||+.||||++......+..+ +..+..   ++++....++++++.++.+.+.+
T Consensus       153 Y~~sKa~aE~~Vl~an~~-~~l~T~aLR~~~IYGpgd~~~~~~i~~~-~~~g~~~f~~g~~~~~~~~~~~~Nva~ahilA  230 (361)
T KOG1430|consen  153 YGESKALAEKLVLEANGS-DDLYTCALRPPGIYGPGDKRLLPKIVEA-LKNGGFLFKIGDGENLNDFTYGENVAWAHILA  230 (361)
T ss_pred             cchHHHHHHHHHHHhcCC-CCeeEEEEccccccCCCCccccHHHHHH-HHccCceEEeeccccccceEEechhHHHHHHH
Confidence            666675555555544432 3799999999999999886542222222 122322   26777888999999999998865


Q ss_pred             hc-----CCCCCc-eEEeeCCCCcCHHHHHHHHHHHhCCCCC--CCCcHHHHHHH--hccC-----c--e---------e
Q 017977          277 LS-----NPSYRG-VINGTAPNPVRLAEMCDHLGNVLGRPSW--LPVPEFALKAV--LGEG-----A--F---------V  330 (363)
Q Consensus       277 ~~-----~~~~~g-~~~i~~~~~~s~~el~~~i~~~~g~~~~--~~~~~~~~~~~--~~~~-----~--~---------~  330 (363)
                      ..     .+...| .|+|.+++++...+++..+.+.+|...+  +..|.+....+  +.++     .  .         .
T Consensus       231 ~~aL~~~~~~~~Gq~yfI~d~~p~~~~~~~~~l~~~lg~~~~~~~~~p~~l~~~~~~l~e~~~~~l~p~~p~lt~~~v~~  310 (361)
T KOG1430|consen  231 ARALLDKSPSVNGQFYFITDDTPVRFFDFLSPLVKALGYCLPSSIKLPLFLSYFLAYLLEIVYFLLRPYQPILTRFRVAL  310 (361)
T ss_pred             HHHHHhcCCccCceEEEEeCCCcchhhHHHHHHHHhcCCCCCceeecchHHHHHHHHHHHHHHHhccCCCCCcChhheee
Confidence            42     223445 9999999999888888899999998744  44554433321  0010     0  1         1


Q ss_pred             eecCcccChhhHH-HcCCCcccccHHHHHHHHh
Q 017977          331 VLEGQRVVPARAK-ELGFPFKYRYVKDALKAIM  362 (363)
Q Consensus       331 ~~~~~~~~~~k~~-~lG~~p~~~~~~~~l~~~~  362 (363)
                      .....-.+..|++ +|||.|..+ ++|++++++
T Consensus       311 ~~~~~~f~~~kA~~~lgY~P~~~-~~e~~~~~~  342 (361)
T KOG1430|consen  311 LGVTRTFSIEKAKRELGYKPLVS-LEEAIQRTI  342 (361)
T ss_pred             eccccccCHHHHHHhhCCCCcCC-HHHHHHHHH
Confidence            1223445689995 599999997 999999876

>PRK05865 hypothetical protein; Provisional

Probab=99.97  E-value=9.1e-30  Score=248.22  Aligned_cols=247  Identities=20%  Similarity=0.281  Sum_probs=178.5

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCCCCCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGT  130 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~~~~~  130 (363)
                      |+|+||||+||||++++++|+++|++|++++|+......  .   ...+..+|+.|.+++.++++++|+|||+|+...  
T Consensus         1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~~~--~---~v~~v~gDL~D~~~l~~al~~vD~VVHlAa~~~--   73 (854)
T PRK05865          1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDSWP--S---SADFIAADIRDATAVESAMTGADVVAHCAWVRG--   73 (854)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhhcc--c---CceEEEeeCCCHHHHHHHHhCCCEEEECCCccc--
Confidence            589999999999999999999999999999997533211  1   112556899999999999999999999998531  


Q ss_pred             CCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhcccchhhHHHHHHH
Q 017977          131 RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRGVLVCREW  210 (363)
Q Consensus       131 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~~y~~~k~~~~~~  210 (363)
                              ..+++|+.++.+++++|.+  .+++++|++||. .                   +            ...  
T Consensus        74 --------~~~~vNv~GT~nLLeAa~~--~gvkr~V~iSS~-~-------------------K------------~aa--  109 (854)
T PRK05865         74 --------RNDHINIDGTANVLKAMAE--TGTGRIVFTSSG-H-------------------Q------------PRV--  109 (854)
T ss_pred             --------chHHHHHHHHHHHHHHHHH--cCCCeEEEECCc-H-------------------H------------HHH--
Confidence                    1467899999999999999  788899999986 1                   1            111  


Q ss_pred             HHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCC---CCCCCccccccHHHHHHHHHHHhcCCC-CCceE
Q 017977          211 EGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSNPS-YRGVI  286 (363)
Q Consensus       211 ~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~i~v~D~a~a~~~~~~~~~-~~g~~  286 (363)
                      +...  ..++++++++||+++|||+..   .++..+   ...++   +.+.+.++|||++|+|++++.++++.. .+++|
T Consensus       110 E~ll--~~~gl~~vILRp~~VYGP~~~---~~i~~l---l~~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~~~ggvy  181 (854)
T PRK05865        110 EQML--ADCGLEWVAVRCALIFGRNVD---NWVQRL---FALPVLPAGYADRVVQVVHSDDAQRLLVRALLDTVIDSGPV  181 (854)
T ss_pred             HHHH--HHcCCCEEEEEeceEeCCChH---HHHHHH---hcCceeccCCCCceEeeeeHHHHHHHHHHHHhCCCcCCCeE
Confidence            1111  124899999999999999632   122111   11222   444566799999999999999986543 46799


Q ss_pred             EeeCCCCcCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhccCc--eeeecCcccChhhHHH-cCCCcccccHHHHHHHHhC
Q 017977          287 NGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGA--FVVLEGQRVVPARAKE-LGFPFKYRYVKDALKAIMS  363 (363)
Q Consensus       287 ~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~k~~~-lG~~p~~~~~~~~l~~~~~  363 (363)
                      |+++++.++++|+++.+.+....   ++.+  ... ..++..  ........+|++|+++ |||+|+++ ++++|+++++
T Consensus       182 NIgsg~~~Si~EIae~l~~~~~~---v~~~--~~~-~~~~~~~~~~~~~~~~~D~sKar~~LGw~P~~s-LeeGL~dti~  254 (854)
T PRK05865        182 NLAAPGELTFRRIAAALGRPMVP---IGSP--VLR-RVTSFAELELLHSAPLMDVTLLRDRWGFQPAWN-AEECLEDFTL  254 (854)
T ss_pred             EEECCCcccHHHHHHHHhhhhcc---CCch--hhh-hccchhhhhcccCCccCCHHHHHHHhCCCCCCC-HHHHHHHHHH
Confidence            99999999999999998875421   1111  000 011111  1111233568999964 89999997 9999999863

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.97  E-value=2.6e-30  Score=222.99  Aligned_cols=223  Identities=25%  Similarity=0.319  Sum_probs=169.6

Q ss_pred             EEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCC--CEEEEccCCCCCC
Q 017977           53 VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGS--TAVVNLAGTPIGT  130 (363)
Q Consensus        53 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~--d~Vi~~a~~~~~~  130 (363)
                      |||||||||||++|+++|+++|+.|+.+.|+..+........ ...+..+|+.|.+.+.+++++.  |+|||+|+... .
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~-~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~~~-~   78 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKL-NVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAFSS-N   78 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHT-TEEEEESETTSHHHHHHHHHHHTESEEEEEBSSSS-H
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccc-eEEEEEeeccccccccccccccCceEEEEeecccc-c
Confidence            799999999999999999999999999999887654321100 1114568999999999999865  99999999742 1


Q ss_pred             CCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC---CcccccccCCCcchhhhhhhcccchhhHHHH
Q 017977          131 RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM---RAAHQEMITWLSDYCAKVYCLVSFNRGVLVC  207 (363)
Q Consensus       131 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg---~~~~~e~~~~~~~~~~~~~~~~~y~~~k~~~  207 (363)
                      ..........++.|+.++.+++++|.+  .+++++|++||. .+|+   ..+++|+.+..+        ...|+.+|...
T Consensus        79 ~~~~~~~~~~~~~n~~~~~~ll~~~~~--~~~~~~i~~sS~-~~y~~~~~~~~~e~~~~~~--------~~~Y~~~K~~~  147 (236)
T PF01370_consen   79 PESFEDPEEIIEANVQGTRNLLEAARE--AGVKRFIFLSSA-SVYGDPDGEPIDEDSPINP--------LSPYGASKRAA  147 (236)
T ss_dssp             HHHHHSHHHHHHHHHHHHHHHHHHHHH--HTTSEEEEEEEG-GGGTSSSSSSBETTSGCCH--------SSHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccc--cccccccccccc-ccccccccccccccccccc--------ccccccccccc
Confidence            112245678899999999999999999  788899999998 9999   456677766411        11155556555


Q ss_pred             HHHHHHHhccCCCceEEEEeeceEEeCC--CCcccchHHHH--HHHhCCCC---CCCCCccccccHHHHHHHHHHHhcCC
Q 017977          208 REWEGTALKVNKDVRLALIRIGIVLGKD--GGALAKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSNP  280 (363)
Q Consensus       208 ~~~~~~~~~~~~~~~~~ilRp~~v~g~~--~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~D~a~a~~~~~~~~  280 (363)
                      ++........ .+++++++||+.+|||.  ......+++.+  ...+++++   +++++.++++|++|+|++++.+++++
T Consensus       148 e~~~~~~~~~-~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  226 (236)
T PF01370_consen  148 EELLRDYAKK-YGLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAALENP  226 (236)
T ss_dssp             HHHHHHHHHH-HTSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHHHHHS
T ss_pred             cccccccccc-cccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHHHHhCC
Confidence            5555544443 38999999999999998  12223444433  45566653   78899999999999999999999998


Q ss_pred             C-CCceEEee
Q 017977          281 S-YRGVINGT  289 (363)
Q Consensus       281 ~-~~g~~~i~  289 (363)
                      . .+++|||+
T Consensus       227 ~~~~~~yNig  236 (236)
T PF01370_consen  227 KAAGGIYNIG  236 (236)
T ss_dssp             CTTTEEEEES
T ss_pred             CCCCCEEEeC
Confidence            8 67799985

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=99.97  E-value=9.5e-30  Score=203.17  Aligned_cols=281  Identities=16%  Similarity=0.162  Sum_probs=207.1

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCC---EEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc--CCCEEEEcc
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNH---QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLA  124 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~Vi~~a  124 (363)
                      +|||||||++|.+|++|.+.+.+.|.   +.+...                 ...+|+++..+.+++++  +...|||+|
T Consensus         1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~-----------------skd~DLt~~a~t~~lF~~ekPthVIhlA   63 (315)
T KOG1431|consen    1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIG-----------------SKDADLTNLADTRALFESEKPTHVIHLA   63 (315)
T ss_pred             CceEEEecCCchHHHHHHHHHHhcCCCCcceEEec-----------------cccccccchHHHHHHHhccCCceeeehH
Confidence            47999999999999999999999875   111111                 22378999888888886  579999999


Q ss_pred             CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC---CcccccccCCCcchhhhhhhcccch
Q 017977          125 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM---RAAHQEMITWLSDYCAKVYCLVSFN  201 (363)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg---~~~~~e~~~~~~~~~~~~~~~~~y~  201 (363)
                      +.+.+-.....++.+++..|+.-..|++..|..  .+++++|++.|+ ++|+   ..|++|..-.+-+...+++   .|.
T Consensus        64 AmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e--~gv~K~vsclSt-CIfPdkt~yPIdEtmvh~gpphpsN~---gYs  137 (315)
T KOG1431|consen   64 AMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHE--HGVKKVVSCLST-CIFPDKTSYPIDETMVHNGPPHPSNF---GYS  137 (315)
T ss_pred             hhhcchhhcCCCchHHHhhcceechhHHHHHHH--hchhhhhhhcce-eecCCCCCCCCCHHHhccCCCCCCch---HHH
Confidence            987665556677889999999999999999999  899999999999 9999   6678886532211111111   123


Q ss_pred             hhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCc---ccchHH----HH--HHHhCC-CC---CCCCCccccccHHH
Q 017977          202 RGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA---LAKMIP----LF--MMFAGG-PL---GSGQQWFSWIHLDD  268 (363)
Q Consensus       202 ~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~---~~~~~~----~~--~~~~~~-~~---~~~~~~~~~i~v~D  268 (363)
                      .+|. ........++.++|..++.+-|.++|||+++.   .+.++|    .+  ...++. ++   |.|...|.|+|++|
T Consensus       138 yAKr-~idv~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys~D  216 (315)
T KOG1431|consen  138 YAKR-MIDVQNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYSDD  216 (315)
T ss_pred             HHHH-HHHHHHHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhHhH
Confidence            3332 23334466777779999999999999998643   233333    33  222233 22   88899999999999


Q ss_pred             HHHHHHHHhcCCCCCceEEeeCCC--CcCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhccCceeeecCcccChhhHHHcC
Q 017977          269 IVNLIYEALSNPSYRGVINGTAPN--PVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELG  346 (363)
Q Consensus       269 ~a~a~~~~~~~~~~~g~~~i~~~~--~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG  346 (363)
                      +|+++++++++...-.-++++.++  .++++|+++++.++++....+.......     +    -+...-.+++|++.+|
T Consensus       217 LA~l~i~vlr~Y~~vEpiils~ge~~EVtI~e~aeaV~ea~~F~G~l~~DttK~-----D----Gq~kKtasnsKL~sl~  287 (315)
T KOG1431|consen  217 LADLFIWVLREYEGVEPIILSVGESDEVTIREAAEAVVEAVDFTGKLVWDTTKS-----D----GQFKKTASNSKLRSLL  287 (315)
T ss_pred             HHHHHHHHHHhhcCccceEeccCccceeEHHHHHHHHHHHhCCCceEEeeccCC-----C----CCcccccchHHHHHhC
Confidence            999999999987766677888776  8999999999999999764322111100     0    0122335799999999


Q ss_pred             CCcccccHHHHHHHHhC
Q 017977          347 FPFKYRYVKDALKAIMS  363 (363)
Q Consensus       347 ~~p~~~~~~~~l~~~~~  363 (363)
                      |.|++++++++|+++++
T Consensus       288 pd~~ft~l~~ai~~t~~  304 (315)
T KOG1431|consen  288 PDFKFTPLEQAISETVQ  304 (315)
T ss_pred             CCcccChHHHHHHHHHH
Confidence            99999999999998763

>KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism]

Probab=99.96  E-value=2.3e-28  Score=195.24  Aligned_cols=288  Identities=57%  Similarity=0.925  Sum_probs=238.6

Q ss_pred             EEEEecCcchHHHHHHH-----HHHhCC----CEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEE
Q 017977           52 TVSVTGATGFIGRRLVQ-----RLQADN----HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVN  122 (363)
Q Consensus        52 ~vlVtGatG~iG~~l~~-----~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~  122 (363)
                      +.++-+++|+|+..|..     .+-+.+    |+|++++|.+.+..-.-.+..   +.++-+       .+..++.++.+
T Consensus        14 ~a~~~~~~g~i~~nl~~~~~~~H~t~~~~a~~h~vtv~sR~pg~~ritw~el~---~~Gip~-------sc~a~vna~g~   83 (315)
T KOG3019|consen   14 DAVSNWSNGIIRENLGSETSCCHDTNVHSADNHAVTVLSRSPGKARITWPELD---FPGIPI-------SCVAGVNAVGN   83 (315)
T ss_pred             cCCCCccccchhccccCcccccccCCCCcccccceEEEecCCCCcccccchhc---CCCCce-------ehHHHHhhhhh
Confidence            56777889999988877     333334    899999999977553322211   111111       22234455666


Q ss_pred             ccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC---CcccccccCCC-cchhhhhhhcc
Q 017977          123 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM---RAAHQEMITWL-SDYCAKVYCLV  198 (363)
Q Consensus       123 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg---~~~~~e~~~~~-~~~~~~~~~~~  198 (363)
                      ++..+.. +|+++-+.++...-+..++.+.+++.+.....+.+|.+|.. ++|-   ...++|+.+.. -+|...     
T Consensus        84 n~l~P~r-RWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gv-a~y~pS~s~eY~e~~~~qgfd~~sr-----  156 (315)
T KOG3019|consen   84 NALLPIR-RWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGV-AVYVPSESQEYSEKIVHQGFDILSR-----  156 (315)
T ss_pred             hccCchh-hcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEee-EEeccccccccccccccCChHHHHH-----
Confidence            6665544 88888888999888999999999999864556679999998 7887   45677776643 345444     


Q ss_pred             cchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHHHHHhc
Q 017977          199 SFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALS  278 (363)
Q Consensus       199 ~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~  278 (363)
                             +|.+||..........+.+++|.|.|.|.+++....++..|+...|.|+++|+|.+.|||++|+|..+..+++
T Consensus       157 -------L~l~WE~aA~~~~~~~r~~~iR~GvVlG~gGGa~~~M~lpF~~g~GGPlGsG~Q~fpWIHv~DL~~li~~ale  229 (315)
T KOG3019|consen  157 -------LCLEWEGAALKANKDVRVALIRIGVVLGKGGGALAMMILPFQMGAGGPLGSGQQWFPWIHVDDLVNLIYEALE  229 (315)
T ss_pred             -------HHHHHHHHhhccCcceeEEEEEEeEEEecCCcchhhhhhhhhhccCCcCCCCCeeeeeeehHHHHHHHHHHHh
Confidence                   7899999888877789999999999999999999899999999999999999999999999999999999999


Q ss_pred             CCCCCceEEeeCCCCcCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhc-cCceeeecCcccChhhHHHcCCCcccccHHHH
Q 017977          279 NPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLG-EGAFVVLEGQRVVPARAKELGFPFKYRYVKDA  357 (363)
Q Consensus       279 ~~~~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~k~~~lG~~p~~~~~~~~  357 (363)
                      ++...|+.|-..+++.+..|+.+.+.++++++.++++|++...++|+ +....+++.+++-+.|+.++||+++|+.+.++
T Consensus       230 ~~~v~GViNgvAP~~~~n~Ef~q~lg~aL~Rp~~~pvP~fvvqA~fG~erA~~vLeGqKV~Pqral~~Gf~f~yp~vk~A  309 (315)
T KOG3019|consen  230 NPSVKGVINGVAPNPVRNGEFCQQLGSALSRPSWLPVPDFVVQALFGPERATVVLEGQKVLPQRALELGFEFKYPYVKDA  309 (315)
T ss_pred             cCCCCceecccCCCccchHHHHHHHHHHhCCCcccCCcHHHHHHHhCccceeEEeeCCcccchhHhhcCceeechHHHHH
Confidence            99999999999999999999999999999999999999999999999 77888999999999999999999999999999


Q ss_pred             HHHHhC
Q 017977          358 LKAIMS  363 (363)
Q Consensus       358 l~~~~~  363 (363)
                      |++++.
T Consensus       310 l~~i~~  315 (315)
T KOG3019|consen  310 LRAIMQ  315 (315)
T ss_pred             HHHHhC
Confidence            999863

>PLN02778 3,5-epimerase/4-reductase

Probab=99.96  E-value=2.9e-27  Score=209.97  Aligned_cols=263  Identities=16%  Similarity=0.134  Sum_probs=171.7

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc--CCCEEEEccCC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGT  126 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~Vi~~a~~  126 (363)
                      ..|+||||||+||||++|+++|+++|++|+...+                    ++.+.+.+...++  ++|+|||+|+.
T Consensus         8 ~~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~~--------------------~~~~~~~v~~~l~~~~~D~ViH~Aa~   67 (298)
T PLN02778          8 ATLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSG--------------------RLENRASLEADIDAVKPTHVFNAAGV   67 (298)
T ss_pred             CCCeEEEECCCCHHHHHHHHHHHhCCCEEEEecC--------------------ccCCHHHHHHHHHhcCCCEEEECCcc
Confidence            3479999999999999999999999999975321                    2233334444444  68999999997


Q ss_pred             CCCC--CCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC-Cc--------ccccccCCCcchhhhhh
Q 017977          127 PIGT--RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM-RA--------AHQEMITWLSDYCAKVY  195 (363)
Q Consensus       127 ~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg-~~--------~~~e~~~~~~~~~~~~~  195 (363)
                      ....  .+...++...+++|+.++.+++++|++  .+++ ++++||. ++|+ ..        +++|++++.++      
T Consensus        68 ~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~--~gv~-~v~~sS~-~vy~~~~~~p~~~~~~~~Ee~~p~~~------  137 (298)
T PLN02778         68 TGRPNVDWCESHKVETIRANVVGTLTLADVCRE--RGLV-LTNYATG-CIFEYDDAHPLGSGIGFKEEDTPNFT------  137 (298)
T ss_pred             cCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHH--hCCC-EEEEecc-eEeCCCCCCCcccCCCCCcCCCCCCC------
Confidence            5432  234567788999999999999999999  6776 6777777 7776 11        25555443211      


Q ss_pred             hcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCC-CCCCCccccccHHHHHHHHH
Q 017977          196 CLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPL-GSGQQWFSWIHLDDIVNLIY  274 (363)
Q Consensus       196 ~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~D~a~a~~  274 (363)
                       .+.|+.+|+..+..... +     -+..++|+..++|++......++.  ....+.++ ..   ..+++|++|++++++
T Consensus       138 -~s~Yg~sK~~~E~~~~~-y-----~~~~~lr~~~~~~~~~~~~~~fi~--~~~~~~~~~~~---~~s~~yv~D~v~al~  205 (298)
T PLN02778        138 -GSFYSKTKAMVEELLKN-Y-----ENVCTLRVRMPISSDLSNPRNFIT--KITRYEKVVNI---PNSMTILDELLPISI  205 (298)
T ss_pred             -CCchHHHHHHHHHHHHH-h-----hccEEeeecccCCcccccHHHHHH--HHHcCCCeeEc---CCCCEEHHHHHHHHH
Confidence             12355556444443332 1     156788988878765332222332  33344432 11   136999999999999


Q ss_pred             HHhcCCCCCceEEeeCCCCcCHHHHHHHHHHHhCCC---CCCCCcHHHHHHHhccCceeeecCcccChhhHHHc-CCCcc
Q 017977          275 EALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRP---SWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKEL-GFPFK  350 (363)
Q Consensus       275 ~~~~~~~~~g~~~i~~~~~~s~~el~~~i~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~l-G~~p~  350 (363)
                      .+++... .|+||+++++.+|+.|+++.+++.+|..   ..+.+++.. .......     ....+|++|++++ +=.+.
T Consensus       206 ~~l~~~~-~g~yNigs~~~iS~~el~~~i~~~~~~~~~~~~~~i~~~~-~~~~~~~-----~~~~Ld~~k~~~~~~~~~~  278 (298)
T PLN02778        206 EMAKRNL-TGIYNFTNPGVVSHNEILEMYRDYIDPSFTWKNFTLEEQA-KVIVAPR-----SNNELDTTKLKREFPELLP  278 (298)
T ss_pred             HHHhCCC-CCeEEeCCCCcccHHHHHHHHHHHhCCCceeccccHHHHH-HHHhCCC-----ccccccHHHHHHhcccccc
Confidence            9997543 5799999999999999999999999964   112222211 1111111     1124778999764 33222


Q ss_pred             cccHHHHHHHHh
Q 017977          351 YRYVKDALKAIM  362 (363)
Q Consensus       351 ~~~~~~~l~~~~  362 (363)
                        ..+++++..+
T Consensus       279 --~~~~~~~~~~  288 (298)
T PLN02778        279 --IKESLIKYVF  288 (298)
T ss_pred             --hHHHHHHHHH
Confidence              4677777654

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.4e-27  Score=235.58  Aligned_cols=255  Identities=18%  Similarity=0.201  Sum_probs=174.4

Q ss_pred             cEEEEecCcchHHHHHHHHHH--hCCCEEEEEeCCCCccc--ccCC--CCCccccCcccccCc------chHHhhccCCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQ--ADNHQVRVLTRSRSKAE--LIFP--GKKTRFFPGVMIAEE------PQWRDCIQGST  118 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~--~~g~~V~~~~r~~~~~~--~~~~--~~~~~~~~~~d~~~~------~~~~~~~~~~d  118 (363)
                      |+|||||||||||++|+++|+  +.|++|++++|+.....  .+..  .........+|+.|.      +.+.++ +++|
T Consensus         1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~~~D   79 (657)
T PRK07201          1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL-GDID   79 (657)
T ss_pred             CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh-cCCC
Confidence            589999999999999999999  57999999999653311  1100  001112445688774      344444 8999


Q ss_pred             EEEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC--CcccccccCCCcchhhhhhh
Q 017977          119 AVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM--RAAHQEMITWLSDYCAKVYC  196 (363)
Q Consensus       119 ~Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg--~~~~~e~~~~~~~~~~~~~~  196 (363)
                      +|||+|+....    ........++|+.++.+++++|.+  .+++++||+||. ++||  ..+++|+....+..     .
T Consensus        80 ~Vih~Aa~~~~----~~~~~~~~~~nv~gt~~ll~~a~~--~~~~~~v~~SS~-~v~g~~~~~~~e~~~~~~~~-----~  147 (657)
T PRK07201         80 HVVHLAAIYDL----TADEEAQRAANVDGTRNVVELAER--LQAATFHHVSSI-AVAGDYEGVFREDDFDEGQG-----L  147 (657)
T ss_pred             EEEECceeecC----CCCHHHHHHHHhHHHHHHHHHHHh--cCCCeEEEEecc-ccccCccCccccccchhhcC-----C
Confidence            99999996422    122456788999999999999999  788999999999 8888  33444443211110     0


Q ss_pred             cccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCc-cc------chHHHHHHHhCC----CC-CCCCCccccc
Q 017977          197 LVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA-LA------KMIPLFMMFAGG----PL-GSGQQWFSWI  264 (363)
Q Consensus       197 ~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~-~~------~~~~~~~~~~~~----~~-~~~~~~~~~i  264 (363)
                      ...|.++|+..+.....    ..+++++++||+.+||+.... ..      .+...+......    +. +.+...++++
T Consensus       148 ~~~Y~~sK~~~E~~~~~----~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  223 (657)
T PRK07201        148 PTPYHRTKFEAEKLVRE----ECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTNIV  223 (657)
T ss_pred             CCchHHHHHHHHHHHHH----cCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCCeeeee
Confidence            12366666555444331    248999999999999985421 11      011222111111    11 3445668999


Q ss_pred             cHHHHHHHHHHHhcCCCC-CceEEeeCCCCcCHHHHHHHHHHHhCCCC----CCCCcHHHHHH
Q 017977          265 HLDDIVNLIYEALSNPSY-RGVINGTAPNPVRLAEMCDHLGNVLGRPS----WLPVPEFALKA  322 (363)
Q Consensus       265 ~v~D~a~a~~~~~~~~~~-~g~~~i~~~~~~s~~el~~~i~~~~g~~~----~~~~~~~~~~~  322 (363)
                      |++|+++++..++..+.. +++||+++++++++.|+++.+.+.+|.+.    ..++|.+....
T Consensus       224 ~vddva~ai~~~~~~~~~~g~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~p~~~~~~  286 (657)
T PRK07201        224 PVDYVADALDHLMHKDGRDGQTFHLTDPKPQRVGDIYNAFARAAGAPPDARLFGFLPGFVAAP  286 (657)
T ss_pred             eHHHHHHHHHHHhcCcCCCCCEEEeCCCCCCcHHHHHHHHHHHhCCCccccccccCChHHHHH
Confidence            999999999999876554 45999999999999999999999999875    24566655443

>PLN02996 fatty acyl-CoA reductase

Probab=99.96  E-value=1.2e-27  Score=225.31  Aligned_cols=253  Identities=15%  Similarity=0.100  Sum_probs=175.6

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCC---CEEEEEeCCCCcccc-------cCCC-------------C-----CccccC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADN---HQVRVLTRSRSKAEL-------IFPG-------------K-----KTRFFP  100 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~-------~~~~-------------~-----~~~~~~  100 (363)
                      ..++|+|||||||+|++|++.|++.+   .+|+++.|.......       +...             .     ......
T Consensus        10 ~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~i   89 (491)
T PLN02996         10 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTPV   89 (491)
T ss_pred             CCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEEE
Confidence            34789999999999999999999764   378999997643211       0000             0     112233


Q ss_pred             ccccc-------CcchHHhhccCCCEEEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccce
Q 017977          101 GVMIA-------EEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPK  173 (363)
Q Consensus       101 ~~d~~-------~~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~  173 (363)
                      .+|+.       +.+.+..+++++|+|||+|+....    ...++...++|+.++.+++++|.+. .+++++||+||. .
T Consensus        90 ~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~----~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~k~~V~vST~-~  163 (491)
T PLN02996         90 PGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNF----DERYDVALGINTLGALNVLNFAKKC-VKVKMLLHVSTA-Y  163 (491)
T ss_pred             ecccCCcCCCCChHHHHHHHHhCCCEEEECccccCC----cCCHHHHHHHHHHHHHHHHHHHHhc-CCCCeEEEEeee-E
Confidence            45666       334466778899999999997532    2346788999999999999999883 367889999999 8


Q ss_pred             ecC--CcccccccCCCcc-hh-----------------------------------------h--hhhhcccchhhHHHH
Q 017977          174 YLM--RAAHQEMITWLSD-YC-----------------------------------------A--KVYCLVSFNRGVLVC  207 (363)
Q Consensus       174 ~yg--~~~~~e~~~~~~~-~~-----------------------------------------~--~~~~~~~y~~~k~~~  207 (363)
                      +||  ...+.|...+.+. +.                                         .  ...-...|+.+|.++
T Consensus       164 vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~a  243 (491)
T PLN02996        164 VCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMG  243 (491)
T ss_pred             EecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHH
Confidence            998  2233332211000 00                                         0  000124589988666


Q ss_pred             HHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHH--------HHHhCCC---CCCCCCccccccHHHHHHHHHHH
Q 017977          208 REWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--------MMFAGGP---LGSGQQWFSWIHLDDIVNLIYEA  276 (363)
Q Consensus       208 ~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~--------~~~~~~~---~~~~~~~~~~i~v~D~a~a~~~~  276 (363)
                      +..... +.  .+++++|+||++|+|+.......|+..+        ....|..   ++++++.+|+|||+|++++++.+
T Consensus       244 E~lv~~-~~--~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~a  320 (491)
T PLN02996        244 EMLLGN-FK--ENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMIVA  320 (491)
T ss_pred             HHHHHH-hc--CCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHHHHHH
Confidence            665543 22  3899999999999999764433333221        2233433   27889999999999999999998


Q ss_pred             hcCC--C--CCceEEeeCC--CCcCHHHHHHHHHHHhCCC
Q 017977          277 LSNP--S--YRGVINGTAP--NPVRLAEMCDHLGNVLGRP  310 (363)
Q Consensus       277 ~~~~--~--~~g~~~i~~~--~~~s~~el~~~i~~~~g~~  310 (363)
                      +...  .  ...+||++++  .++++.|+++.+.+.++.-
T Consensus       321 ~~~~~~~~~~~~vYNi~s~~~~~~s~~ei~~~~~~~~~~~  360 (491)
T PLN02996        321 MAAHAGGQGSEIIYHVGSSLKNPVKFSNLHDFAYRYFSKN  360 (491)
T ss_pred             HHHhhccCCCCcEEEecCCCCCcccHHHHHHHHHHHhhhC
Confidence            8753  1  2359999998  8899999999999988754

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.95  E-value=5.5e-27  Score=215.43  Aligned_cols=239  Identities=20%  Similarity=0.230  Sum_probs=171.3

Q ss_pred             CCCCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccc------cCCCCCccccCcccccCcchHHhhcc----
Q 017977           46 QKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL------IFPGKKTRFFPGVMIAEEPQWRDCIQ----  115 (363)
Q Consensus        46 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~~~~~~~~~~~~~d~~~~~~~~~~~~----  115 (363)
                      .+..+|+|+|||||||||++++++|+++|++|++++|+......      ............+|+.|.+++.++++    
T Consensus        56 ~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~  135 (390)
T PLN02657         56 KEPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGD  135 (390)
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCC
Confidence            44556799999999999999999999999999999998754321      10111112245689999999999887    


Q ss_pred             CCCEEEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhhhhh
Q 017977          116 GSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVY  195 (363)
Q Consensus       116 ~~d~Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~  195 (363)
                      ++|+||||++.....      ....+++|+.++.++++++++  .++++||++||. ++++         +...|..   
T Consensus       136 ~~D~Vi~~aa~~~~~------~~~~~~vn~~~~~~ll~aa~~--~gv~r~V~iSS~-~v~~---------p~~~~~~---  194 (390)
T PLN02657        136 PVDVVVSCLASRTGG------VKDSWKIDYQATKNSLDAGRE--VGAKHFVLLSAI-CVQK---------PLLEFQR---  194 (390)
T ss_pred             CCcEEEECCccCCCC------CccchhhHHHHHHHHHHHHHH--cCCCEEEEEeec-cccC---------cchHHHH---
Confidence            599999998853211      124467899999999999999  789999999998 5442         1112322   


Q ss_pred             hcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCC---CCCCCcc-ccccHHHHHH
Q 017977          196 CLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPL---GSGQQWF-SWIHLDDIVN  271 (363)
Q Consensus       196 ~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~i~v~D~a~  271 (363)
                             +|   .+.+........+++++|+||+.+||...    ..+.  ....+.++   ++++..+ ++||++|+|+
T Consensus       195 -------sK---~~~E~~l~~~~~gl~~tIlRp~~~~~~~~----~~~~--~~~~g~~~~~~GdG~~~~~~~I~v~DlA~  258 (390)
T PLN02657        195 -------AK---LKFEAELQALDSDFTYSIVRPTAFFKSLG----GQVE--IVKDGGPYVMFGDGKLCACKPISEADLAS  258 (390)
T ss_pred             -------HH---HHHHHHHHhccCCCCEEEEccHHHhcccH----HHHH--hhccCCceEEecCCcccccCceeHHHHHH
Confidence                   22   22333332223589999999999997522    1111  22344543   5666544 5799999999


Q ss_pred             HHHHHhcCCC-CCceEEeeCC-CCcCHHHHHHHHHHHhCCCC-CCCCcHHHHH
Q 017977          272 LIYEALSNPS-YRGVINGTAP-NPVRLAEMCDHLGNVLGRPS-WLPVPEFALK  321 (363)
Q Consensus       272 a~~~~~~~~~-~~g~~~i~~~-~~~s~~el~~~i~~~~g~~~-~~~~~~~~~~  321 (363)
                      +++.++.++. .+++||++++ +.+|++|+++.+.+.+|++. ...+|.+...
T Consensus       259 ~i~~~~~~~~~~~~~~~Iggp~~~~S~~Eia~~l~~~lG~~~~~~~vp~~~~~  311 (390)
T PLN02657        259 FIADCVLDESKINKVLPIGGPGKALTPLEQGEMLFRILGKEPKFFKVPIQIMD  311 (390)
T ss_pred             HHHHHHhCccccCCEEEcCCCCcccCHHHHHHHHHHHhCCCCceEEcCHHHHH
Confidence            9999997655 4569999986 68999999999999999873 3467777665

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.95  E-value=2.8e-27  Score=195.79  Aligned_cols=299  Identities=15%  Similarity=0.092  Sum_probs=214.9

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCccccc----CCCC----CccccCcccccCcchHHhhcc--CCCE
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI----FPGK----KTRFFPGVMIAEEPQWRDCIQ--GSTA  119 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~----~~~~~~~~d~~~~~~~~~~~~--~~d~  119 (363)
                      +++.||||-||+-|.+|++.|++.||+|+++.|+.+.....    ....    .......+|++|...+.++++  +.|-
T Consensus         2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~PdE   81 (345)
T COG1089           2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQPDE   81 (345)
T ss_pred             CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcCchh
Confidence            46899999999999999999999999999999986543221    1111    112244579999999999887  5699


Q ss_pred             EEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC---CcccccccC--CCcchhhhh
Q 017977          120 VVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM---RAAHQEMIT--WLSDYCAKV  194 (363)
Q Consensus       120 Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg---~~~~~e~~~--~~~~~~~~~  194 (363)
                      |+|+|+. +.+..+.+.+....+++..|+.+++|+++-......+|...||+ ..||   ..|.+|++|  |.++|...|
T Consensus        82 IYNLaAQ-S~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStS-E~fG~v~~~pq~E~TPFyPrSPYAvAK  159 (345)
T COG1089          82 IYNLAAQ-SHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTS-ELYGLVQEIPQKETTPFYPRSPYAVAK  159 (345)
T ss_pred             heecccc-ccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccH-HhhcCcccCccccCCCCCCCCHHHHHH
Confidence            9999997 45566777788999999999999999999852112346677777 8999   778899888  456776654


Q ss_pred             hhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCC--cccchHHHH--HHHhCCC----CCCCCCccccccH
Q 017977          195 YCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGG--ALAKMIPLF--MMFAGGP----LGSGQQWFSWIHL  266 (363)
Q Consensus       195 ~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~--~~~~~~~~~--~~~~~~~----~~~~~~~~~~i~v  266 (363)
                                 +.+-|....++..+|+-.+.=+..+--+|..+  ...+-+...  ++..|..    +|+-+..+||-|.
T Consensus       160 -----------lYa~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A  228 (345)
T COG1089         160 -----------LYAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHA  228 (345)
T ss_pred             -----------HHHHheeeehHhhcCceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEeccccccccccch
Confidence                       66788888888888988877666555566433  233433322  3333332    4888999999999


Q ss_pred             HHHHHHHHHHhcCCCCCceEEeeCCCCcCHHHHHHHHHHHhCCC-CCC--CCcHHHHHHHhccCc----eeeecC-----
Q 017977          267 DDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRP-SWL--PVPEFALKAVLGEGA----FVVLEG-----  334 (363)
Q Consensus       267 ~D~a~a~~~~~~~~~~~g~~~i~~~~~~s~~el~~~i~~~~g~~-~~~--~~~~~~~~~~~~~~~----~~~~~~-----  334 (363)
                      .|.+++++..++.+. ...|.++.++..|++|+++...+..|.+ .|.  -+.+.-..+..|...    ....++     
T Consensus       229 ~DYVe~mwlmLQq~~-PddyViATg~t~sVrefv~~Af~~~g~~l~w~g~g~~e~g~da~~G~~~V~idp~~fRPaEV~~  307 (345)
T COG1089         229 KDYVEAMWLMLQQEE-PDDYVIATGETHSVREFVELAFEMVGIDLEWEGTGVDEKGVDAKTGKIIVEIDPRYFRPAEVDL  307 (345)
T ss_pred             HHHHHHHHHHHccCC-CCceEEecCceeeHHHHHHHHHHHcCceEEEeeccccccccccccCceeEEECccccCchhhhh
Confidence            999999999998765 5699999999999999999999999965 111  001100000011000    000011     


Q ss_pred             cccChhhHH-HcCCCcccccHHHHHHHHhC
Q 017977          335 QRVVPARAK-ELGFPFKYRYVKDALKAIMS  363 (363)
Q Consensus       335 ~~~~~~k~~-~lG~~p~~~~~~~~l~~~~~  363 (363)
                      ..-|++|++ +|||+|+++ ++|-++++++
T Consensus       308 Llgdp~KA~~~LGW~~~~~-~~elv~~Mv~  336 (345)
T COG1089         308 LLGDPTKAKEKLGWRPEVS-LEELVREMVE  336 (345)
T ss_pred             hcCCHHHHHHHcCCccccC-HHHHHHHHHH
Confidence            112589996 699999998 9999999874

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.95  E-value=1.4e-25  Score=206.19  Aligned_cols=258  Identities=19%  Similarity=0.188  Sum_probs=174.7

Q ss_pred             EEEEecCcchHHHHHHHHHHhCC--CEEEEEeCCCCccc---ccC--------CCC----CccccCcccccCc------c
Q 017977           52 TVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAE---LIF--------PGK----KTRFFPGVMIAEE------P  108 (363)
Q Consensus        52 ~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~---~~~--------~~~----~~~~~~~~d~~~~------~  108 (363)
                      +|+|||||||||++|+++|+++|  ++|++++|+.+...   .+.        ...    .......+|+.++      +
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            58999999999999999999998  67999999876321   100        000    1112334566543      4


Q ss_pred             hHHhhccCCCEEEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCC---cccccccC
Q 017977          109 QWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMR---AAHQEMIT  185 (363)
Q Consensus       109 ~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~---~~~~e~~~  185 (363)
                      .+..+.+++|+|||+|+....    ....+.+.+.|+.++.++++++.+  .+.+++|++||. ++|+.   .+..|+.+
T Consensus        81 ~~~~~~~~~d~vih~a~~~~~----~~~~~~~~~~nv~g~~~ll~~a~~--~~~~~~v~iSS~-~v~~~~~~~~~~~~~~  153 (367)
T TIGR01746        81 EWERLAENVDTIVHNGALVNW----VYPYSELRAANVLGTREVLRLAAS--GRAKPLHYVSTI-SVLAAIDLSTVTEDDA  153 (367)
T ss_pred             HHHHHHhhCCEEEeCCcEecc----CCcHHHHhhhhhHHHHHHHHHHhh--CCCceEEEEccc-cccCCcCCCCcccccc
Confidence            566677889999999997421    122456788999999999999999  778889999999 77772   12233322


Q ss_pred             CCcchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCC-Cc--ccchHHHH-H-HHhCCCCCCCC-C
Q 017977          186 WLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDG-GA--LAKMIPLF-M-MFAGGPLGSGQ-Q  259 (363)
Q Consensus       186 ~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~-~~--~~~~~~~~-~-~~~~~~~~~~~-~  259 (363)
                      ......   .....|..+|+..+........ . |++++++||+.++|+.. +.  ...++..+ . ......++... .
T Consensus       154 ~~~~~~---~~~~~Y~~sK~~~E~~~~~~~~-~-g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~  228 (367)
T TIGR01746       154 IVTPPP---GLAGGYAQSKWVAELLVREASD-R-GLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGAYPDSPEL  228 (367)
T ss_pred             cccccc---ccCCChHHHHHHHHHHHHHHHh-c-CCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhCCCCCCCcc
Confidence            211111   0123577778766665544332 2 89999999999999732 21  12222222 1 11112223233 3


Q ss_pred             ccccccHHHHHHHHHHHhcCCCC---CceEEeeCCCCcCHHHHHHHHHHHhCCC-CCCCCcHHHHHH
Q 017977          260 WFSWIHLDDIVNLIYEALSNPSY---RGVINGTAPNPVRLAEMCDHLGNVLGRP-SWLPVPEFALKA  322 (363)
Q Consensus       260 ~~~~i~v~D~a~a~~~~~~~~~~---~g~~~i~~~~~~s~~el~~~i~~~~g~~-~~~~~~~~~~~~  322 (363)
                      ..++++++|+|++++.++..+..   +++||++++++++++|+++.+.+ .|.+ ..++.++|....
T Consensus       229 ~~~~~~vddva~ai~~~~~~~~~~~~~~~~~v~~~~~~s~~e~~~~i~~-~g~~~~~~~~~~w~~~~  294 (367)
T TIGR01746       229 TEDLTPVDYVARAIVALSSQPAASAGGPVFHVVNPEPVSLDEFLEWLER-AGYNLKLVSFDEWLQRL  294 (367)
T ss_pred             ccCcccHHHHHHHHHHHHhCCCcccCCceEEecCCCCCCHHHHHHHHHH-cCCCCCcCCHHHHHHHH
Confidence            57899999999999999877653   56999999999999999999999 8876 345667776544

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.94  E-value=3.4e-25  Score=196.44  Aligned_cols=256  Identities=18%  Similarity=0.142  Sum_probs=170.5

Q ss_pred             EEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhc------cC-CCEEEEcc
Q 017977           52 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI------QG-STAVVNLA  124 (363)
Q Consensus        52 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~------~~-~d~Vi~~a  124 (363)
                      +|+||||||++|++++++|+++|++|++++|++++....  .   .....+|+.|.+++.+++      ++ +|.|+|++
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~~~--~---~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~   75 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSAGP--N---EKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVA   75 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCccccCC--C---CccccccCCCHHHHHHHHhcccCcCCceeEEEEeC
Confidence            489999999999999999999999999999998754321  1   113457999999999988      57 99999998


Q ss_pred             CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhcccchhhH
Q 017977          125 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRGV  204 (363)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~~y~~~k  204 (363)
                      +...    .          ......++++++++  .++++||++||. +.+.      ..+   .   .           
T Consensus        76 ~~~~----~----------~~~~~~~~i~aa~~--~gv~~~V~~Ss~-~~~~------~~~---~---~-----------  115 (285)
T TIGR03649        76 PPIP----D----------LAPPMIKFIDFARS--KGVRRFVLLSAS-IIEK------GGP---A---M-----------  115 (285)
T ss_pred             CCCC----C----------hhHHHHHHHHHHHH--cCCCEEEEeecc-ccCC------CCc---h---H-----------
Confidence            7421    1          01234589999999  899999999987 3211      000   0   0           


Q ss_pred             HHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCC--CCCCCccccccHHHHHHHHHHHhcCCC-
Q 017977          205 LVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPL--GSGQQWFSWIHLDDIVNLIYEALSNPS-  281 (363)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~v~D~a~a~~~~~~~~~-  281 (363)
                         ...+.... ...|++++++||+.+++.....  ....  .......+  +.++..+++|+++|+|+++..++.++. 
T Consensus       116 ---~~~~~~l~-~~~gi~~tilRp~~f~~~~~~~--~~~~--~~~~~~~~~~~~g~~~~~~v~~~Dva~~~~~~l~~~~~  187 (285)
T TIGR03649       116 ---GQVHAHLD-SLGGVEYTVLRPTWFMENFSEE--FHVE--AIRKENKIYSATGDGKIPFVSADDIARVAYRALTDKVA  187 (285)
T ss_pred             ---HHHHHHHH-hccCCCEEEEeccHHhhhhccc--cccc--ccccCCeEEecCCCCccCcccHHHHHHHHHHHhcCCCc
Confidence               01111111 1138999999999888543111  0001  01111111  456778899999999999999998765 


Q ss_pred             CCceEEeeCCCCcCHHHHHHHHHHHhCCCC-CCCCcHHHHHHHhcc-------------Cceeeec-CcccChhhHHH-c
Q 017977          282 YRGVINGTAPNPVRLAEMCDHLGNVLGRPS-WLPVPEFALKAVLGE-------------GAFVVLE-GQRVVPARAKE-L  345 (363)
Q Consensus       282 ~~g~~~i~~~~~~s~~el~~~i~~~~g~~~-~~~~~~~~~~~~~~~-------------~~~~~~~-~~~~~~~k~~~-l  345 (363)
                      .++.|++.+++.+|++|+++.+.+.+|++. ..++|...+...+..             +...... .....+...++ +
T Consensus       188 ~~~~~~l~g~~~~s~~eia~~l~~~~g~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  267 (285)
T TIGR03649       188 PNTDYVVLGPELLTYDDVAEILSRVLGRKITHVKLTEEELAQRLQSFGMPEDLARMLASLDTAVKNGAEVRLNDVVKAVT  267 (285)
T ss_pred             CCCeEEeeCCccCCHHHHHHHHHHHhCCceEEEeCCHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCccccccchHHHHh
Confidence            456899999999999999999999999983 334444333221110             0000001 01112344444 8


Q ss_pred             CCCcccccHHHHHHHHh
Q 017977          346 GFPFKYRYVKDALKAIM  362 (363)
Q Consensus       346 G~~p~~~~~~~~l~~~~  362 (363)
                      |.+|+  ++++.+++..
T Consensus       268 G~~p~--~~~~~~~~~~  282 (285)
T TIGR03649       268 GSKPR--GFRDFAESNK  282 (285)
T ss_pred             CcCCc--cHHHHHHHhh
Confidence            99999  7999998753

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.93  E-value=7.8e-24  Score=208.52  Aligned_cols=264  Identities=15%  Similarity=0.136  Sum_probs=175.7

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc--CCCEEEEccCC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGT  126 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~Vi~~a~~  126 (363)
                      ..||||||||+||||++|++.|.++|++|....                    .|+.|.+.+...+.  ++|+|||+|+.
T Consensus       379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~~--------------------~~l~d~~~v~~~i~~~~pd~Vih~Aa~  438 (668)
T PLN02260        379 PSLKFLIYGRTGWIGGLLGKLCEKQGIAYEYGK--------------------GRLEDRSSLLADIRNVKPTHVFNAAGV  438 (668)
T ss_pred             CCceEEEECCCchHHHHHHHHHHhCCCeEEeec--------------------cccccHHHHHHHHHhhCCCEEEECCcc
Confidence            457999999999999999999999999883110                    24566667776665  68999999997


Q ss_pred             CCC--CCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCC---------cccccccCCCcchhhhhh
Q 017977          127 PIG--TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMR---------AAHQEMITWLSDYCAKVY  195 (363)
Q Consensus       127 ~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~---------~~~~e~~~~~~~~~~~~~  195 (363)
                      ...  ..+++.++...+++|+.++.+++++|++  .+++ +|++||. .+|+.         .+++|++++.+.      
T Consensus       439 ~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~--~g~~-~v~~Ss~-~v~~~~~~~~~~~~~p~~E~~~~~~~------  508 (668)
T PLN02260        439 TGRPNVDWCESHKVETIRANVVGTLTLADVCRE--NGLL-MMNFATG-CIFEYDAKHPEGSGIGFKEEDKPNFT------  508 (668)
T ss_pred             cCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHH--cCCe-EEEEccc-ceecCCcccccccCCCCCcCCCCCCC------
Confidence            542  3345667889999999999999999999  7776 7778877 77751         256666543221      


Q ss_pred             hcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHHHH
Q 017977          196 CLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE  275 (363)
Q Consensus       196 ~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~  275 (363)
                       .+.|+.+|+..+..... +     .++.++|+..+|+........++..+... ...+.-   ..+..+++|++.+++.
T Consensus       509 -~~~Yg~sK~~~E~~~~~-~-----~~~~~~r~~~~~~~~~~~~~nfv~~~~~~-~~~~~v---p~~~~~~~~~~~~~~~  577 (668)
T PLN02260        509 -GSFYSKTKAMVEELLRE-Y-----DNVCTLRVRMPISSDLSNPRNFITKISRY-NKVVNI---PNSMTVLDELLPISIE  577 (668)
T ss_pred             -CChhhHHHHHHHHHHHh-h-----hhheEEEEEEecccCCCCccHHHHHHhcc-ceeecc---CCCceehhhHHHHHHH
Confidence             12255555444333322 1     25788899999975422222344333211 112211   1346888999999888


Q ss_pred             HhcCCCCCceEEeeCCCCcCHHHHHHHHHHHhCCCC-CCCCcHHHHHH-HhccCceeeecCcccChhhHHH-cCCCcccc
Q 017977          276 ALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPS-WLPVPEFALKA-VLGEGAFVVLEGQRVVPARAKE-LGFPFKYR  352 (363)
Q Consensus       276 ~~~~~~~~g~~~i~~~~~~s~~el~~~i~~~~g~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~k~~~-lG~~p~~~  352 (363)
                      +++. ..+|+||+++++.+|+.|+++.|.+.++... ..+++...... .....     ....++++|+++ +|. +.  
T Consensus       578 l~~~-~~~giyni~~~~~~s~~e~a~~i~~~~~~~~~~~~~~~~~~~~~~~a~r-----p~~~l~~~k~~~~~~~-~~--  648 (668)
T PLN02260        578 MAKR-NLRGIWNFTNPGVVSHNEILEMYKDYIDPGFKWSNFTLEEQAKVIVAPR-----SNNEMDASKLKKEFPE-LL--  648 (668)
T ss_pred             HHHh-CCCceEEecCCCcCcHHHHHHHHHHhcCCcccccccCHHHhhhHhhCCC-----ccccccHHHHHHhCcc-cc--
Confidence            8864 3368999999999999999999999885221 22332222210 11111     111577999976 688 54  


Q ss_pred             cHHHHHHHHh
Q 017977          353 YVKDALKAIM  362 (363)
Q Consensus       353 ~~~~~l~~~~  362 (363)
                      +|+|+|++++
T Consensus       649 ~~~~~l~~~~  658 (668)
T PLN02260        649 SIKESLIKYV  658 (668)
T ss_pred             chHHHHHHHH
Confidence            5999999876

>PRK12320 hypothetical protein; Provisional

Probab=99.93  E-value=4.2e-24  Score=204.71  Aligned_cols=200  Identities=19%  Similarity=0.204  Sum_probs=143.5

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCCCCCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGT  130 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~~~~~  130 (363)
                      ||||||||+||||++|+++|+++||+|++++|.+.....  .   ...+...|+.+.. +.+++.++|+|||+|+.... 
T Consensus         1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~~~--~---~ve~v~~Dl~d~~-l~~al~~~D~VIHLAa~~~~-   73 (699)
T PRK12320          1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDALD--P---RVDYVCASLRNPV-LQELAGEADAVIHLAPVDTS-   73 (699)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhccc--C---CceEEEccCCCHH-HHHHhcCCCEEEEcCccCcc-
Confidence            589999999999999999999999999999987643211  1   1124557887774 77888899999999986211 


Q ss_pred             CCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhcccchhhHHHHHHH
Q 017977          131 RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRGVLVCREW  210 (363)
Q Consensus       131 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~~y~~~k~~~~~~  210 (363)
                              ....+|+.++.|++++|++  .++ ++||+||.   +|       .+.  .|..              .+..
T Consensus        74 --------~~~~vNv~Gt~nLleAA~~--~Gv-RiV~~SS~---~G-------~~~--~~~~--------------aE~l  116 (699)
T PRK12320         74 --------APGGVGITGLAHVANAAAR--AGA-RLLFVSQA---AG-------RPE--LYRQ--------------AETL  116 (699)
T ss_pred             --------chhhHHHHHHHHHHHHHHH--cCC-eEEEEECC---CC-------CCc--cccH--------------HHHH
Confidence                    1124799999999999999  676 59999876   22       010  1111              1111


Q ss_pred             HHHHhccCCCceEEEEeeceEEeCCCCc-ccchHHHH--HHHhCCCCCCCCCccccccHHHHHHHHHHHhcCCCCCceEE
Q 017977          211 EGTALKVNKDVRLALIRIGIVLGKDGGA-LAKMIPLF--MMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVIN  287 (363)
Q Consensus       211 ~~~~~~~~~~~~~~ilRp~~v~g~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~g~~~  287 (363)
                         .  ..++++++++|++++||+.... ..+++..+  ....       .+...+||++|++++++.+++... .|+||
T Consensus       117 ---l--~~~~~p~~ILR~~nVYGp~~~~~~~r~I~~~l~~~~~-------~~pI~vIyVdDvv~alv~al~~~~-~GiyN  183 (699)
T PRK12320        117 ---V--STGWAPSLVIRIAPPVGRQLDWMVCRTVATLLRSKVS-------ARPIRVLHLDDLVRFLVLALNTDR-NGVVD  183 (699)
T ss_pred             ---H--HhcCCCEEEEeCceecCCCCcccHhHHHHHHHHHHHc-------CCceEEEEHHHHHHHHHHHHhCCC-CCEEE
Confidence               1  1236899999999999996432 12333333  1112       223456999999999999997643 56999


Q ss_pred             eeCCCCcCHHHHHHHHHHHh
Q 017977          288 GTAPNPVRLAEMCDHLGNVL  307 (363)
Q Consensus       288 i~~~~~~s~~el~~~i~~~~  307 (363)
                      +++++.+|+.|+++.+....
T Consensus       184 IG~~~~~Si~el~~~i~~~~  203 (699)
T PRK12320        184 LATPDTTNVVTAWRLLRSVD  203 (699)
T ss_pred             EeCCCeeEHHHHHHHHHHhC
Confidence            99999999999999997773

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.92  E-value=3.9e-25  Score=189.24  Aligned_cols=231  Identities=20%  Similarity=0.242  Sum_probs=164.5

Q ss_pred             EEEecCcchHHHHHHHHHHhCC-CEEEEEeCCCCcccccCCCC-------Ccc---ccCcccccCcchHHhhcc--CCCE
Q 017977           53 VSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGK-------KTR---FFPGVMIAEEPQWRDCIQ--GSTA  119 (363)
Q Consensus        53 vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~-------~~~---~~~~~d~~~~~~~~~~~~--~~d~  119 (363)
                      ||||||+|.||+.|+++|++.+ .++++++|++.....+....       ...   ...-+|+.|.+.+..+++  ++|+
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi   80 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI   80 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence            7999999999999999999987 58999999986643221111       100   112468999999999999  8999


Q ss_pred             EEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhccc
Q 017977          120 VVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVS  199 (363)
Q Consensus       120 Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~~  199 (363)
                      |||+|+.- .++..+.++.+..++|+.|+.|++++|.+  .+++++|++||--          ...|.+-|+++      
T Consensus        81 VfHaAA~K-hVpl~E~~p~eav~tNv~GT~nv~~aa~~--~~v~~~v~ISTDK----------Av~PtnvmGat------  141 (293)
T PF02719_consen   81 VFHAAALK-HVPLMEDNPFEAVKTNVLGTQNVAEAAIE--HGVERFVFISTDK----------AVNPTNVMGAT------  141 (293)
T ss_dssp             EEE-------HHHHCCCHHHHHHHHCHHHHHHHHHHHH--TT-SEEEEEEECG----------CSS--SHHHHH------
T ss_pred             EEEChhcC-CCChHHhCHHHHHHHHHHHHHHHHHHHHH--cCCCEEEEccccc----------cCCCCcHHHHH------
Confidence            99999974 44556778999999999999999999999  8999999999862          23344566665      


Q ss_pred             chhhHHHHHHHHHHHhccC--CCceEEEEeeceEEeCCCCcccchHHHH--HHHhCCCC--CCCCCccccccHHHHHHHH
Q 017977          200 FNRGVLVCREWEGTALKVN--KDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL--GSGQQWFSWIHLDDIVNLI  273 (363)
Q Consensus       200 y~~~k~~~~~~~~~~~~~~--~~~~~~ilRp~~v~g~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~i~v~D~a~a~  273 (363)
                          |.+++..........  .+..++++|+|+|.|-.+    .+++.|  ++.+|+|+  .+++-.|-|+.+++.++.+
T Consensus       142 ----KrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~G----SVip~F~~Qi~~g~PlTvT~p~mtRffmti~EAv~Lv  213 (293)
T PF02719_consen  142 ----KRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRG----SVIPLFKKQIKNGGPLTVTDPDMTRFFMTIEEAVQLV  213 (293)
T ss_dssp             ----HHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGTT----SCHHHHHHHHHTTSSEEECETT-EEEEE-HHHHHHHH
T ss_pred             ----HHHHHHHHHHHhhhCCCCCcEEEEEEecceecCCC----cHHHHHHHHHHcCCcceeCCCCcEEEEecHHHHHHHH
Confidence                545555544444433  268999999999998765    446666  66677786  6778888999999999999


Q ss_pred             HHHhcCCCCCceEEeeCCCCcCHHHHHHHHHHHhCCC
Q 017977          274 YEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRP  310 (363)
Q Consensus       274 ~~~~~~~~~~g~~~i~~~~~~s~~el~~~i~~~~g~~  310 (363)
                      +.+......+.+|..--|+++++.|+++.+.+..|..
T Consensus       214 l~a~~~~~~geifvl~mg~~v~I~dlA~~~i~~~g~~  250 (293)
T PF02719_consen  214 LQAAALAKGGEIFVLDMGEPVKILDLAEAMIELSGLE  250 (293)
T ss_dssp             HHHHHH--TTEEEEE---TCEECCCHHHHHHHHTT-E
T ss_pred             HHHHhhCCCCcEEEecCCCCcCHHHHHHHHHhhcccc
Confidence            9998776656689888889999999999999999854

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.91  E-value=7.2e-23  Score=186.16  Aligned_cols=235  Identities=20%  Similarity=0.243  Sum_probs=187.3

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCC-CEEEEEeCCCCccccc----CCC--CCccccCcccccCcchHHhhccC--CC
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELI----FPG--KKTRFFPGVMIAEEPQWRDCIQG--ST  118 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~----~~~--~~~~~~~~~d~~~~~~~~~~~~~--~d  118 (363)
                      -.+++||||||+|-||+.+++++++.+ -+++.++|++.+....    ...  .....+.-+|+.|.+.+..++++  +|
T Consensus       248 ~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~kvd  327 (588)
T COG1086         248 LTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHKVD  327 (588)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcCCCc
Confidence            445799999999999999999999987 5899999988653221    111  11112334799999999999998  99


Q ss_pred             EEEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhcc
Q 017977          119 AVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLV  198 (363)
Q Consensus       119 ~Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~  198 (363)
                      +|||+|+. -.++..+.++.+.+.+|+.||+|++++|.+  .+++++|++||--+          ..|.+.|+++     
T Consensus       328 ~VfHAAA~-KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~--~~V~~~V~iSTDKA----------V~PtNvmGaT-----  389 (588)
T COG1086         328 IVFHAAAL-KHVPLVEYNPEEAIKTNVLGTENVAEAAIK--NGVKKFVLISTDKA----------VNPTNVMGAT-----  389 (588)
T ss_pred             eEEEhhhh-ccCcchhcCHHHHHHHhhHhHHHHHHHHHH--hCCCEEEEEecCcc----------cCCchHhhHH-----
Confidence            99999997 455778999999999999999999999999  89999999998733          2344456655     


Q ss_pred             cchhhHHHHHHHHHHHhccCC--CceEEEEeeceEEeCCCCcccchHHHH--HHHhCCCC--CCCCCccccccHHHHHHH
Q 017977          199 SFNRGVLVCREWEGTALKVNK--DVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL--GSGQQWFSWIHLDDIVNL  272 (363)
Q Consensus       199 ~y~~~k~~~~~~~~~~~~~~~--~~~~~ilRp~~v~g~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~i~v~D~a~a  272 (363)
                           |.++++..........  +..++.+|+|+|.|-.+    .++|.|  ++.+|+|+  .+++-.|-|..+.|.++.
T Consensus       390 -----Kr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrG----SViPlFk~QI~~GgplTvTdp~mtRyfMTI~EAv~L  460 (588)
T COG1086         390 -----KRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRG----SVIPLFKKQIAEGGPLTVTDPDMTRFFMTIPEAVQL  460 (588)
T ss_pred             -----HHHHHHHHHHHhhccCCCCcEEEEEEecceecCCC----CCHHHHHHHHHcCCCccccCCCceeEEEEHHHHHHH
Confidence                 4445555444433233  58999999999999875    457777  66778886  677778889999999999


Q ss_pred             HHHHhcCCCCCceEEeeCCCCcCHHHHHHHHHHHhCC
Q 017977          273 IYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGR  309 (363)
Q Consensus       273 ~~~~~~~~~~~g~~~i~~~~~~s~~el~~~i~~~~g~  309 (363)
                      ++.+......+.+|.+--|+++.+.|+++.+-+..|.
T Consensus       461 VlqA~a~~~gGeifvldMGepvkI~dLAk~mi~l~g~  497 (588)
T COG1086         461 VLQAGAIAKGGEIFVLDMGEPVKIIDLAKAMIELAGQ  497 (588)
T ss_pred             HHHHHhhcCCCcEEEEcCCCCeEHHHHHHHHHHHhCC
Confidence            9999987765669999999999999999999999983

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.90  E-value=6.2e-23  Score=194.63  Aligned_cols=252  Identities=13%  Similarity=0.103  Sum_probs=168.2

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCC---EEEEEeCCCCccc-------ccCC------------C------CCccccC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNH---QVRVLTRSRSKAE-------LIFP------------G------KKTRFFP  100 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~-------~~~~------------~------~~~~~~~  100 (363)
                      ..++|||||||||||++|++.|++.+.   +|+++.|......       .+..            .      .......
T Consensus       118 ~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v  197 (605)
T PLN02503        118 RGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPV  197 (605)
T ss_pred             cCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEE
Confidence            357999999999999999999998653   7899999654311       1100            0      1112234


Q ss_pred             cccccCc------chHHhhccCCCEEEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEecccee
Q 017977          101 GVMIAEE------PQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKY  174 (363)
Q Consensus       101 ~~d~~~~------~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~  174 (363)
                      .+|+.++      +.++.+.+++|+|||+|+....    ....+..+++|+.++.+++++|.+. ...+++||+||. .+
T Consensus       198 ~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f----~~~~~~a~~vNV~GT~nLLelA~~~-~~lk~fV~vSTa-yV  271 (605)
T PLN02503        198 VGNVCESNLGLEPDLADEIAKEVDVIINSAANTTF----DERYDVAIDINTRGPCHLMSFAKKC-KKLKLFLQVSTA-YV  271 (605)
T ss_pred             EeeCCCcccCCCHHHHHHHHhcCCEEEECcccccc----ccCHHHHHHHHHHHHHHHHHHHHHc-CCCCeEEEccCc-ee
Confidence            5688765      3556666789999999997421    2346788999999999999999883 356789999998 99


Q ss_pred             cC--CcccccccCCC-c-------------------chh----------h---------h------------hhhcccch
Q 017977          175 LM--RAAHQEMITWL-S-------------------DYC----------A---------K------------VYCLVSFN  201 (363)
Q Consensus       175 yg--~~~~~e~~~~~-~-------------------~~~----------~---------~------------~~~~~~y~  201 (363)
                      ||  ...+.|...+. .                   +..          .         .            ..-...|+
T Consensus       272 yG~~~G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtYt  351 (605)
T PLN02503        272 NGQRQGRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTYV  351 (605)
T ss_pred             ecCCCCeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCChHH
Confidence            99  23555543320 0                   000          0         0            01124588


Q ss_pred             hhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCccc-------chHHHH-HHHhCC---CCCCCCCccccccHHHHH
Q 017977          202 RGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALA-------KMIPLF-MMFAGG---PLGSGQQWFSWIHLDDIV  270 (363)
Q Consensus       202 ~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~-------~~~~~~-~~~~~~---~~~~~~~~~~~i~v~D~a  270 (363)
                      .+|.+++.....   ...+++++|+||+.|.+.....+.       ...+.. ....|.   -+++++...|+|+||.++
T Consensus       352 ~TK~lAE~lV~~---~~~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~g~G~lr~~~~~~~~~~DiVPVD~vv  428 (605)
T PLN02503        352 FTKAMGEMVINS---MRGDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQLTGFLADPNGVLDVVPADMVV  428 (605)
T ss_pred             HHHHHHHHHHHH---hcCCCCEEEEcCCEecccccCCccccccCccccchhhhheeccceeEEEeCCCeeEeEEeecHHH
Confidence            888655555442   223899999999999442111111       111111 112232   126888899999999999


Q ss_pred             HHHHHHhcC-C----CCCceEEeeCC--CCcCHHHHHHHHHHHhCC
Q 017977          271 NLIYEALSN-P----SYRGVINGTAP--NPVRLAEMCDHLGNVLGR  309 (363)
Q Consensus       271 ~a~~~~~~~-~----~~~g~~~i~~~--~~~s~~el~~~i~~~~g~  309 (363)
                      ++++.++.. .    ....+||++++  ++++|.++.+.+.+.+..
T Consensus       429 na~i~a~a~~~~~~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~~~  474 (605)
T PLN02503        429 NATLAAMAKHGGAAKPEINVYQIASSVVNPLVFQDLARLLYEHYKS  474 (605)
T ss_pred             HHHHHHHHhhhcccCCCCCEEEeCCCCCCCeEHHHHHHHHHHHHhh
Confidence            999988432 1    12459999988  899999999999987764

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.90  E-value=9.9e-23  Score=177.09  Aligned_cols=231  Identities=18%  Similarity=0.161  Sum_probs=148.8

Q ss_pred             CCCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccC-cchHHhhc-cCCCEEEEcc
Q 017977           47 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAE-EPQWRDCI-QGSTAVVNLA  124 (363)
Q Consensus        47 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~-~~~d~Vi~~a  124 (363)
                      ...+|+|+||||||++|++++++|+++||+|+++.|+.++...............+|+.+ .+.+.+.+ .++|+|||++
T Consensus        14 ~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~~~   93 (251)
T PLN00141         14 NVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAIGDDSDAVICAT   93 (251)
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHhhcCCCEEEECC
Confidence            344689999999999999999999999999999999876543322211112244578887 36677777 6899999998


Q ss_pred             CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhcccchhhH
Q 017977          125 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRGV  204 (363)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~~y~~~k  204 (363)
                      +....  ..   ....+++|..++.++++++.+  .+++++|++||. ++||...   ..+..+.|...+    .|..  
T Consensus        94 g~~~~--~~---~~~~~~~n~~~~~~ll~a~~~--~~~~~iV~iSS~-~v~g~~~---~~~~~~~~~~~~----~~~~--  156 (251)
T PLN00141         94 GFRRS--FD---PFAPWKVDNFGTVNLVEACRK--AGVTRFILVSSI-LVNGAAM---GQILNPAYIFLN----LFGL--  156 (251)
T ss_pred             CCCcC--CC---CCCceeeehHHHHHHHHHHHH--cCCCEEEEEccc-cccCCCc---ccccCcchhHHH----HHHH--
Confidence            85311  11   112346788899999999998  788999999999 7787211   111112222211    0110  


Q ss_pred             HHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHHHHHhcCCCC-C
Q 017977          205 LVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSY-R  283 (363)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~-~  283 (363)
                      +...+...+.+....+++++++||+.++++....  .+.     ..    ........+|+.+|+|+++..++..+.. .
T Consensus       157 ~~~~k~~~e~~l~~~gi~~~iirpg~~~~~~~~~--~~~-----~~----~~~~~~~~~i~~~dvA~~~~~~~~~~~~~~  225 (251)
T PLN00141        157 TLVAKLQAEKYIRKSGINYTIVRPGGLTNDPPTG--NIV-----ME----PEDTLYEGSISRDQVAEVAVEALLCPESSY  225 (251)
T ss_pred             HHHHHHHHHHHHHhcCCcEEEEECCCccCCCCCc--eEE-----EC----CCCccccCcccHHHHHHHHHHHhcChhhcC
Confidence            0112222222222348999999999999764211  100     00    0111123479999999999999988774 4


Q ss_pred             ceEEeeCC---CCcCHHHHHHHHHH
Q 017977          284 GVINGTAP---NPVRLAEMCDHLGN  305 (363)
Q Consensus       284 g~~~i~~~---~~~s~~el~~~i~~  305 (363)
                      .++.+.+.   ...+++++...+++
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~  250 (251)
T PLN00141        226 KVVEIVARADAPKRSYKDLFASIKQ  250 (251)
T ss_pred             cEEEEecCCCCCchhHHHHHHHhhc
Confidence            47888763   23678888877764

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.90  E-value=1.8e-22  Score=167.07  Aligned_cols=183  Identities=25%  Similarity=0.347  Sum_probs=129.7

Q ss_pred             EEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCCCCCCCC
Q 017977           53 VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGTRW  132 (363)
Q Consensus        53 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~~~~~~~  132 (363)
                      |+|+||||++|+.++++|+++|++|++++|++++.+. ..   ......+|+.|.+++.++++++|+||++++....   
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~-~~---~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~~~---   73 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED-SP---GVEIIQGDLFDPDSVKAALKGADAVIHAAGPPPK---   73 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH-CT---TEEEEESCTTCHHHHHHHHTTSSEEEECCHSTTT---
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc-cc---ccccceeeehhhhhhhhhhhhcchhhhhhhhhcc---
Confidence            7999999999999999999999999999999987665 11   1125568999999999999999999999976311   


Q ss_pred             ChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhcccchhhHHHHHHHHH
Q 017977          133 SSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRGVLVCREWEG  212 (363)
Q Consensus       133 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~~y~~~k~~~~~~~~  212 (363)
                                 +...++++++++++  .+++++|++|+. ++|+..+..........+       ..|...+   .+.+.
T Consensus        74 -----------~~~~~~~~~~a~~~--~~~~~~v~~s~~-~~~~~~~~~~~~~~~~~~-------~~~~~~~---~~~e~  129 (183)
T PF13460_consen   74 -----------DVDAAKNIIEAAKK--AGVKRVVYLSSA-GVYRDPPGLFSDEDKPIF-------PEYARDK---REAEE  129 (183)
T ss_dssp             -----------HHHHHHHHHHHHHH--TTSSEEEEEEET-TGTTTCTSEEEGGTCGGG-------HHHHHHH---HHHHH
T ss_pred             -----------cccccccccccccc--cccccceeeecc-ccCCCCCcccccccccch-------hhhHHHH---HHHHH
Confidence                       16677899999999  899999999999 777611111111111111       1122212   22232


Q ss_pred             HHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHHHHHhcC
Q 017977          213 TALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN  279 (363)
Q Consensus       213 ~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~  279 (363)
                      .. .. .+++|+++||+.+||+..... .+..          ..+....++|+++|+|++++.++++
T Consensus       130 ~~-~~-~~~~~~ivrp~~~~~~~~~~~-~~~~----------~~~~~~~~~i~~~DvA~~~~~~l~~  183 (183)
T PF13460_consen  130 AL-RE-SGLNWTIVRPGWIYGNPSRSY-RLIK----------EGGPQGVNFISREDVAKAIVEALEN  183 (183)
T ss_dssp             HH-HH-STSEEEEEEESEEEBTTSSSE-EEES----------STSTTSHCEEEHHHHHHHHHHHHH-
T ss_pred             HH-Hh-cCCCEEEEECcEeEeCCCcce-eEEe----------ccCCCCcCcCCHHHHHHHHHHHhCC
Confidence            22 23 389999999999999974421 2211          0234456899999999999998864

...

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=99.89  E-value=9.6e-22  Score=162.96  Aligned_cols=247  Identities=21%  Similarity=0.270  Sum_probs=183.2

Q ss_pred             CCCCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCc-ccccC--CCCCccccCcccccCcchHHhhccCCCEEEE
Q 017977           46 QKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK-AELIF--PGKKTRFFPGVMIAEEPQWRDCIQGSTAVVN  122 (363)
Q Consensus        46 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~--~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~  122 (363)
                      ++.++..+-|.|||||+|++++..|.+.|-+|++-.|.... ..+++  .......+...|+.|+++++++++...+|||
T Consensus        57 sS~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk~sNVVIN  136 (391)
T KOG2865|consen   57 SSVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDEDSIRAVVKHSNVVIN  136 (391)
T ss_pred             ccccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecccccceeeeccCCCCHHHHHHHHHhCcEEEE
Confidence            33445578999999999999999999999999999996644 23332  3334444667899999999999999999999


Q ss_pred             ccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhcccchh
Q 017977          123 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVSFNR  202 (363)
Q Consensus       123 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~~y~~  202 (363)
                      +.|-.    +... .-.+.++|+.++++|.+.|++  .|+.+||++|+.+.         +-...+.|.          +
T Consensus       137 LIGrd----~eTk-nf~f~Dvn~~~aerlAricke--~GVerfIhvS~Lga---------nv~s~Sr~L----------r  190 (391)
T KOG2865|consen  137 LIGRD----YETK-NFSFEDVNVHIAERLARICKE--AGVERFIHVSCLGA---------NVKSPSRML----------R  190 (391)
T ss_pred             eeccc----cccC-CcccccccchHHHHHHHHHHh--hChhheeehhhccc---------cccChHHHH----------H
Confidence            99863    2222 235678999999999999999  89999999999832         111222333          3


Q ss_pred             hHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCC-CCC-CCccccccHHHHHHHHHHHhcCC
Q 017977          203 GVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPL-GSG-QQWFSWIHLDDIVNLIYEALSNP  280 (363)
Q Consensus       203 ~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~i~v~D~a~a~~~~~~~~  280 (363)
                      +|++.++....   .  =-..+|+||+.|||..++.++.+...+..+.-.++ +.| ...-..|+|-|+|.+++.++..+
T Consensus       191 sK~~gE~aVrd---a--fPeAtIirPa~iyG~eDrfln~ya~~~rk~~~~pL~~~GekT~K~PVyV~DVaa~IvnAvkDp  265 (391)
T KOG2865|consen  191 SKAAGEEAVRD---A--FPEATIIRPADIYGTEDRFLNYYASFWRKFGFLPLIGKGEKTVKQPVYVVDVAAAIVNAVKDP  265 (391)
T ss_pred             hhhhhHHHHHh---h--CCcceeechhhhcccchhHHHHHHHHHHhcCceeeecCCcceeeccEEEehHHHHHHHhccCc
Confidence            33233333221   1  24689999999999998877666666654444454 222 34456899999999999999999


Q ss_pred             CCCc-eEEeeCCCCcCHHHHHHHHHHHhCCC---CCCCCcHHHHHHH
Q 017977          281 SYRG-VINGTAPNPVRLAEMCDHLGNVLGRP---SWLPVPEFALKAV  323 (363)
Q Consensus       281 ~~~g-~~~i~~~~~~s~~el~~~i~~~~g~~---~~~~~~~~~~~~~  323 (363)
                      ++.| +|..++++.+...|+++++-+..-+-   ..+++|-+.+...
T Consensus       266 ~s~Gktye~vGP~~yql~eLvd~my~~~~~~~ry~r~~mP~f~a~a~  312 (391)
T KOG2865|consen  266 DSMGKTYEFVGPDRYQLSELVDIMYDMAREWPRYVRLPMPIFKAMAA  312 (391)
T ss_pred             cccCceeeecCCchhhHHHHHHHHHHHHhhccccccCCcHHHHHHHh
Confidence            8777 99999999999999999998887653   2356676666554

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.88  E-value=1.6e-21  Score=172.12  Aligned_cols=235  Identities=12%  Similarity=0.065  Sum_probs=156.1

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCC-CCccccCcccccCcchHHhhcc-------CCCEEEE
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTAVVN  122 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~d~Vi~  122 (363)
                      ++||||||+|+||++++++|+++|++|++++|+......+... .....+..+|+.|.+++.++++       ++|+|||
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~   82 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVS   82 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            6899999999999999999999999999999987554332211 1112245689999888876654       5799999


Q ss_pred             ccCCCCCCC---CChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhc
Q 017977          123 LAGTPIGTR---WSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCL  197 (363)
Q Consensus       123 ~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~  197 (363)
                      +||......   ...+..+..+++|+.++.++++++.+.  ..+.+++|++||.++..+       .+..+.|..+    
T Consensus        83 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-------~~~~~~Y~~s----  151 (276)
T PRK06482         83 NAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIA-------YPGFSLYHAT----  151 (276)
T ss_pred             CCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccC-------CCCCchhHHH----
Confidence            999753322   234556778999999999999997321  146678999999743221       2233445544    


Q ss_pred             ccchhhHHHHHHHHHHHhcc--CCCceEEEEeeceE---EeCCCCc------ccc-hHHHH-HHHhCCCCCCCCCccccc
Q 017977          198 VSFNRGVLVCREWEGTALKV--NKDVRLALIRIGIV---LGKDGGA------LAK-MIPLF-MMFAGGPLGSGQQWFSWI  264 (363)
Q Consensus       198 ~~y~~~k~~~~~~~~~~~~~--~~~~~~~ilRp~~v---~g~~~~~------~~~-~~~~~-~~~~~~~~~~~~~~~~~i  264 (363)
                            |+............  .+|++++++||+.+   ||++...      ... ....+ ......++      .-+.
T Consensus       152 ------K~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~  219 (276)
T PRK06482        152 ------KWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALADGSF------AIPG  219 (276)
T ss_pred             ------HHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhhccC------CCCC
Confidence                  43333222222111  24899999999988   5443211      000 01111 11111111      1146


Q ss_pred             cHHHHHHHHHHHhcCCCCCceEEeeCCCCcCHHHHHHHHHHHhC
Q 017977          265 HLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLG  308 (363)
Q Consensus       265 ~v~D~a~a~~~~~~~~~~~g~~~i~~~~~~s~~el~~~i~~~~g  308 (363)
                      +++|++++++.++..+.....||+++++..+..|++..+.+.++
T Consensus       220 d~~~~~~a~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  263 (276)
T PRK06482        220 DPQKMVQAMIASADQTPAPRRLTLGSDAYASIRAALSERLAALE  263 (276)
T ss_pred             CHHHHHHHHHHHHcCCCCCeEEecChHHHHHHHHHHHHHHHHHH
Confidence            89999999999998765556899999988888888888877774

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.88  E-value=5.1e-23  Score=178.39  Aligned_cols=211  Identities=15%  Similarity=0.170  Sum_probs=116.3

Q ss_pred             EecCcchHHHHHHHHHHhCCC--EEEEEeCCCCcc---ccc----CCC----------CCccccCcccccCc------ch
Q 017977           55 VTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKA---ELI----FPG----------KKTRFFPGVMIAEE------PQ  109 (363)
Q Consensus        55 VtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~---~~~----~~~----------~~~~~~~~~d~~~~------~~  109 (363)
                      |||||||+|++|+++|++.+.  +|+++.|..+..   +.+    ...          ........+|+.++      +.
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999876  999999987441   111    100          12222344677643      46


Q ss_pred             HHhhccCCCEEEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC--CcccccccC--
Q 017977          110 WRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM--RAAHQEMIT--  185 (363)
Q Consensus       110 ~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg--~~~~~e~~~--  185 (363)
                      +..+.+++|+|||||+.....   . ..++++++|+.|++++++.|..  ...++|+|+||+ .+.+  .....|+..  
T Consensus        81 ~~~L~~~v~~IiH~Aa~v~~~---~-~~~~~~~~NV~gt~~ll~la~~--~~~~~~~~iSTa-~v~~~~~~~~~~~~~~~  153 (249)
T PF07993_consen   81 YQELAEEVDVIIHCAASVNFN---A-PYSELRAVNVDGTRNLLRLAAQ--GKRKRFHYISTA-YVAGSRPGTIEEKVYPE  153 (249)
T ss_dssp             HHHHHHH--EEEE--SS-SBS-----S--EEHHHHHHHHHHHHHHHTS--SS---EEEEEEG-GGTTS-TTT--SSS-HH
T ss_pred             hhccccccceeeecchhhhhc---c-cchhhhhhHHHHHHHHHHHHHh--ccCcceEEeccc-cccCCCCCccccccccc
Confidence            777778999999999985332   1 2455889999999999999997  566689999995 5555  222222110  


Q ss_pred             CCcchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeC-CCCcc--cc-hHHHH--HHHhCC-C--CCC
Q 017977          186 WLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGK-DGGAL--AK-MIPLF--MMFAGG-P--LGS  256 (363)
Q Consensus       186 ~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~-~~~~~--~~-~~~~~--~~~~~~-~--~~~  256 (363)
                      ..............|.++||+++.......... |++++|+||+.|+|. ..+..  .. +...+  ....+. +  .+.
T Consensus       154 ~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~-g~p~~I~Rp~~i~g~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~  232 (249)
T PF07993_consen  154 EEDDLDPPQGFPNGYEQSKWVAERLLREAAQRH-GLPVTIYRPGIIVGDSRTGWWNSDDFFPYLLRSCIALGAFPDLPGD  232 (249)
T ss_dssp             H--EEE--TTSEE-HHHHHHHHHHHHHHHHHHH----EEEEEE-EEE-SSSSS---TTBHHHHHHHHHHHH-EEES-SB-
T ss_pred             ccccchhhccCCccHHHHHHHHHHHHHHHHhcC-CceEEEEecCcccccCCCceeeccchHHHHHHHHHHcCCcccccCC
Confidence            000001111123468889998888888777653 899999999999994 22221  22 12112  111222 1  244


Q ss_pred             CCCccccccHHHHHHHH
Q 017977          257 GQQWFSWIHLDDIVNLI  273 (363)
Q Consensus       257 ~~~~~~~i~v~D~a~a~  273 (363)
                      ++...++++||.+|++|
T Consensus       233 ~~~~~d~vPVD~va~aI  249 (249)
T PF07993_consen  233 PDARLDLVPVDYVARAI  249 (249)
T ss_dssp             --TT--EEEHHHHHHHH
T ss_pred             CCceEeEECHHHHHhhC
Confidence            45569999999999986

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.87  E-value=4.7e-21  Score=178.54  Aligned_cols=229  Identities=15%  Similarity=0.070  Sum_probs=148.0

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCC---------C----CccccCcccccCcchHHhhc
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG---------K----KTRFFPGVMIAEEPQWRDCI  114 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~---------~----~~~~~~~~d~~~~~~~~~~~  114 (363)
                      ..+++|+||||+|+||++++++|+++|++|++++|+......+...         .    ....+..+|+.|.+++.+++
T Consensus        78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aL  157 (576)
T PLN03209         78 KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPAL  157 (576)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHh
Confidence            3456899999999999999999999999999999987664332110         0    11224568999999999999


Q ss_pred             cCCCEEEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEecccee-cCCcccccccCCCcchhhh
Q 017977          115 QGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKY-LMRAAHQEMITWLSDYCAK  193 (363)
Q Consensus       115 ~~~d~Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~-yg~~~~~e~~~~~~~~~~~  193 (363)
                      .++|+|||++|....   ........+++|+.++.++++++.+  .++++||++||.+.. .+   .    + ...|. .
T Consensus       158 ggiDiVVn~AG~~~~---~v~d~~~~~~VN~~Gt~nLl~Aa~~--agVgRIV~VSSiga~~~g---~----p-~~~~~-s  223 (576)
T PLN03209        158 GNASVVICCIGASEK---EVFDVTGPYRIDYLATKNLVDAATV--AKVNHFILVTSLGTNKVG---F----P-AAILN-L  223 (576)
T ss_pred             cCCCEEEEccccccc---cccchhhHHHHHHHHHHHHHHHHHH--hCCCEEEEEccchhcccC---c----c-ccchh-h
Confidence            999999999986421   1112456788999999999999999  788999999998421 11   0    0 00111 1


Q ss_pred             hhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHH
Q 017977          194 VYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLI  273 (363)
Q Consensus       194 ~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~  273 (363)
                      +   ..|...|   ...+..+  ...|++|++||||.++++.+.....  ..+....+.     ......+..+|+|+++
T Consensus       224 k---~~~~~~K---raaE~~L--~~sGIrvTIVRPG~L~tp~d~~~~t--~~v~~~~~d-----~~~gr~isreDVA~vV  288 (576)
T PLN03209        224 F---WGVLCWK---RKAEEAL--IASGLPYTIVRPGGMERPTDAYKET--HNLTLSEED-----TLFGGQVSNLQVAELM  288 (576)
T ss_pred             H---HHHHHHH---HHHHHHH--HHcCCCEEEEECCeecCCccccccc--cceeecccc-----ccCCCccCHHHHHHHH
Confidence            1   1122212   2222222  2349999999999998874331100  000000000     1111358899999999


Q ss_pred             HHHhcCCC--CCceEEeeCCCCcCHHHHHHHHHH
Q 017977          274 YEALSNPS--YRGVINGTAPNPVRLAEMCDHLGN  305 (363)
Q Consensus       274 ~~~~~~~~--~~g~~~i~~~~~~s~~el~~~i~~  305 (363)
                      +.++.++.  ...+|.+.++.......+.+++.+
T Consensus       289 vfLasd~~as~~kvvevi~~~~~p~~~~~~~~~~  322 (576)
T PLN03209        289 ACMAKNRRLSYCKVVEVIAETTAPLTPMEELLAK  322 (576)
T ss_pred             HHHHcCchhccceEEEEEeCCCCCCCCHHHHHHh
Confidence            99998664  344889988754433444444443

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.87  E-value=3e-21  Score=168.09  Aligned_cols=243  Identities=16%  Similarity=0.182  Sum_probs=156.1

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCC-CEEEEEeCCCCcccc---c---CC--------CCCccccCccccc------Ccch
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAEL---I---FP--------GKKTRFFPGVMIA------EEPQ  109 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~---~---~~--------~~~~~~~~~~d~~------~~~~  109 (363)
                      ++||+||||||+|.+|+.+|+.+- .+|++++|..+....   +   ..        ..........|+.      +...
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            479999999999999999999764 599999998763211   1   00        0000111123443      4557


Q ss_pred             HHhhccCCCEEEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC-------Cccccc
Q 017977          110 WRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM-------RAAHQE  182 (363)
Q Consensus       110 ~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg-------~~~~~e  182 (363)
                      +.++.+.+|.|||+|+.+...    ....+++..|+.|+..+++.|..  ...|.++|+||. +++.       ....++
T Consensus        81 ~~~La~~vD~I~H~gA~Vn~v----~pYs~L~~~NVlGT~evlrLa~~--gk~Kp~~yVSsi-sv~~~~~~~~~~~~~~~  153 (382)
T COG3320          81 WQELAENVDLIIHNAALVNHV----FPYSELRGANVLGTAEVLRLAAT--GKPKPLHYVSSI-SVGETEYYSNFTVDFDE  153 (382)
T ss_pred             HHHHhhhcceEEecchhhccc----CcHHHhcCcchHhHHHHHHHHhc--CCCceeEEEeee-eeccccccCCCcccccc
Confidence            788888999999999985332    23568899999999999999999  788889999999 7766       111222


Q ss_pred             ccCCCcchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCC-C--cccchHHHH--HHHhCCCCCCC
Q 017977          183 MITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDG-G--ALAKMIPLF--MMFAGGPLGSG  257 (363)
Q Consensus       183 ~~~~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~-~--~~~~~~~~~--~~~~~~~~~~~  257 (363)
                      ..+   ...........|+++||+.+....++-..  |++++|+|||.|.|+.. +  +...+...+  ...+-..++..
T Consensus       154 ~~~---~~~~~~~~~~GY~~SKwvaE~Lvr~A~~r--GLpv~I~Rpg~I~gds~tG~~n~~D~~~Rlv~~~~~lg~~P~~  228 (382)
T COG3320         154 ISP---TRNVGQGLAGGYGRSKWVAEKLVREAGDR--GLPVTIFRPGYITGDSRTGALNTRDFLTRLVLGLLQLGIAPDS  228 (382)
T ss_pred             ccc---cccccCccCCCcchhHHHHHHHHHHHhhc--CCCeEEEecCeeeccCccCccccchHHHHHHHHHHHhCCCCCc
Confidence            222   12222233467999999988888777665  99999999999999864 2  223333333  11111122222


Q ss_pred             CCccccccHHHHHHHHH-----------HHhcCCC-CCceEE-eeCCCCcCHHHHHHHHHH
Q 017977          258 QQWFSWIHLDDIVNLIY-----------EALSNPS-YRGVIN-GTAPNPVRLAEMCDHLGN  305 (363)
Q Consensus       258 ~~~~~~i~v~D~a~a~~-----------~~~~~~~-~~g~~~-i~~~~~~s~~el~~~i~~  305 (363)
                      ....+++.++++|+++.           .+..++. .-..|+ ...|..+...++.+.+.+
T Consensus       229 ~~~~~~~p~~~v~~~v~~~~~~~~~~~~~l~~~~~~~f~~~~~~~~~~~i~l~~~~~w~~~  289 (382)
T COG3320         229 EYSLDMLPVDHVARAVVAPSVQVAEAIAALGAHSDIRFNQLHMLTHPDEIGLDEYVDWLIS  289 (382)
T ss_pred             ccchhhCccceeeEEeehhhhhHHHHHHHhccCccchhhheecccCCCccchhHHHHhHhh
Confidence            33344555444444333           2222222 122444 233778999999999888

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.87  E-value=1.5e-20  Score=200.10  Aligned_cols=258  Identities=15%  Similarity=0.146  Sum_probs=173.8

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCC----CEEEEEeCCCCcccccCC--------------CCCccccCccccc------
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADN----HQVRVLTRSRSKAELIFP--------------GKKTRFFPGVMIA------  105 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~--------------~~~~~~~~~~d~~------  105 (363)
                      .++|+|||||||+|++|++.|++++    ++|+++.|..........              ......+..+|+.      
T Consensus       971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443       971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred             CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence            4799999999999999999999877    899999997643221100              0001113345664      


Q ss_pred             CcchHHhhccCCCEEEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCc-------
Q 017977          106 EEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRA-------  178 (363)
Q Consensus       106 ~~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~-------  178 (363)
                      +.+.+.++..++|+|||+|+....   . .....+...|+.++.++++++.+  .++++++|+||. ++|+..       
T Consensus      1051 ~~~~~~~l~~~~d~iiH~Aa~~~~---~-~~~~~~~~~nv~gt~~ll~~a~~--~~~~~~v~vSS~-~v~~~~~~~~~~~ 1123 (1389)
T TIGR03443      1051 SDEKWSDLTNEVDVIIHNGALVHW---V-YPYSKLRDANVIGTINVLNLCAE--GKAKQFSFVSST-SALDTEYYVNLSD 1123 (1389)
T ss_pred             CHHHHHHHHhcCCEEEECCcEecC---c-cCHHHHHHhHHHHHHHHHHHHHh--CCCceEEEEeCe-eecCcccccchhh
Confidence            334566777889999999997532   1 12345667899999999999998  788899999999 788621       


Q ss_pred             --------ccccccCCCcchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCC---cccchHHHH-
Q 017977          179 --------AHQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGG---ALAKMIPLF-  246 (363)
Q Consensus       179 --------~~~e~~~~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~---~~~~~~~~~-  246 (363)
                              .+.|..+...   ........|+.+|++++........  .|++++++||+.|||+...   ....++..+ 
T Consensus      1124 ~~~~~~~~~~~e~~~~~~---~~~~~~~~Y~~sK~~aE~l~~~~~~--~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~ 1198 (1389)
T TIGR03443      1124 ELVQAGGAGIPESDDLMG---SSKGLGTGYGQSKWVAEYIIREAGK--RGLRGCIVRPGYVTGDSKTGATNTDDFLLRML 1198 (1389)
T ss_pred             hhhhccCCCCCccccccc---ccccCCCChHHHHHHHHHHHHHHHh--CCCCEEEECCCccccCCCcCCCCchhHHHHHH
Confidence                    1112111100   0011234588889887776655433  3899999999999998532   122333322 


Q ss_pred             H-HHhCCCCCCCCCccccccHHHHHHHHHHHhcCCCC---CceEEeeCCCCcCHHHHHHHHHHHhCCC-CCCCCcHHHH
Q 017977          247 M-MFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSY---RGVINGTAPNPVRLAEMCDHLGNVLGRP-SWLPVPEFAL  320 (363)
Q Consensus       247 ~-~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~---~g~~~i~~~~~~s~~el~~~i~~~~g~~-~~~~~~~~~~  320 (363)
                      . ...-..++.....+++++++|+|++++.++.++..   ..+||+.++..+++.++++.+.+. |.+ ..++.++|..
T Consensus      1199 ~~~~~~~~~p~~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~-g~~~~~~~~~~w~~ 1276 (1389)
T TIGR03443      1199 KGCIQLGLIPNINNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHPRIRFNDFLGTLKTY-GYDVEIVDYVHWRK 1276 (1389)
T ss_pred             HHHHHhCCcCCCCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCCCCcHHHHHHHHHHh-CCCCCccCHHHHHH
Confidence            1 11122234455678999999999999999876541   238999998889999999999764 554 3345556654

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=99.85  E-value=1.7e-20  Score=152.45  Aligned_cols=294  Identities=18%  Similarity=0.152  Sum_probs=190.5

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCccc-----ccCCC-----CCccccCcccccCcchHHhhcc--CCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE-----LIFPG-----KKTRFFPGVMIAEEPQWRDCIQ--GST  118 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~~~~~-----~~~~~~~~~d~~~~~~~~~~~~--~~d  118 (363)
                      +..||||.||.=|++|++-|+..||+|.++.|+.+...     .+...     +..-...-.|++|...+.+++.  +.+
T Consensus        29 kvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~ikPt  108 (376)
T KOG1372|consen   29 KVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTIKPT  108 (376)
T ss_pred             eEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhccCch
Confidence            46899999999999999999999999999999876532     22211     1111133479999999998887  468


Q ss_pred             EEEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCC-CCCCeEEEeccceecC---CcccccccC--CCcchhh
Q 017977          119 AVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPE-GVRPSVLELVKPKYLM---RAAHQEMIT--WLSDYCA  192 (363)
Q Consensus       119 ~Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~v~~SS~~~~yg---~~~~~e~~~--~~~~~~~  192 (363)
                      -|+|+|+.. .+..+-+.++..-++...|+.+|+++++.++- ..-+|--.||+ ..||   +.|..|..|  |.++|..
T Consensus       109 EiYnLaAQS-HVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstS-ElyGkv~e~PQsE~TPFyPRSPYa~  186 (376)
T KOG1372|consen  109 EVYNLAAQS-HVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTS-ELYGKVQEIPQSETTPFYPRSPYAA  186 (376)
T ss_pred             hhhhhhhhc-ceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccH-hhcccccCCCcccCCCCCCCChhHH
Confidence            999999974 33344455667778889999999999998622 22335555666 9999   667788777  3456655


Q ss_pred             hhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEe---CCCC--cccchHHHH--HHHhCC--C--CCCCCCcc
Q 017977          193 KVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLG---KDGG--ALAKMIPLF--MMFAGG--P--LGSGQQWF  261 (363)
Q Consensus       193 ~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g---~~~~--~~~~~~~~~--~~~~~~--~--~~~~~~~~  261 (363)
                      .|           +..-|....++..+++-.+   -|.+|.   |..+  ...+-+...  ++..++  .  +++-+..+
T Consensus       187 aK-----------my~~WivvNyREAYnmfAc---NGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~LGNL~a~R  252 (376)
T KOG1372|consen  187 AK-----------MYGYWIVVNYREAYNMFAC---NGILFNHESPRRGENFVTRKITRSVAKISLGQQEKIELGNLSALR  252 (376)
T ss_pred             hh-----------hhheEEEEEhHHhhcceee---ccEeecCCCCccccchhhHHHHHHHHHhhhcceeeEEecchhhhc
Confidence            43           2233333333333333222   233343   3222  223333322  222332  2  38888899


Q ss_pred             ccccHHHHHHHHHHHhcCCCCCceEEeeCCCCcCHHHHHHHHHHHhCCCC-CC--CCcHHH--HHHH------hccCcee
Q 017977          262 SWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPS-WL--PVPEFA--LKAV------LGEGAFV  330 (363)
Q Consensus       262 ~~i~v~D~a~a~~~~~~~~~~~g~~~i~~~~~~s~~el~~~i~~~~g~~~-~~--~~~~~~--~~~~------~~~~~~~  330 (363)
                      ||-|..|.++|++..+++.. ..-|.|+.++..|++|+.+.--..+|... |.  .+.+-.  ....      .......
T Consensus       253 DWGhA~dYVEAMW~mLQ~d~-PdDfViATge~hsVrEF~~~aF~~ig~~l~Weg~gv~~~~~n~~g~v~V~v~~kYyRPt  331 (376)
T KOG1372|consen  253 DWGHAGDYVEAMWLMLQQDS-PDDFVIATGEQHSVREFCNLAFAEIGEVLNWEGEGVDEVGKNDDGVVRVKVDPKYYRPT  331 (376)
T ss_pred             ccchhHHHHHHHHHHHhcCC-CCceEEecCCcccHHHHHHHHHHhhCcEEeecccccccccccCCceEEEEecccccCcc
Confidence            99999999999999998765 45889999999999999999888888541 11  000000  0000      0000000


Q ss_pred             eecCcccChhhHH-HcCCCcccccHHHHHHHHh
Q 017977          331 VLEGQRVVPARAK-ELGFPFKYRYVKDALKAIM  362 (363)
Q Consensus       331 ~~~~~~~~~~k~~-~lG~~p~~~~~~~~l~~~~  362 (363)
                      -.+..+-+.+|++ .|||+|+.+ ++|-+++++
T Consensus       332 EVd~LqGdasKAk~~LgW~pkv~-f~eLVkeMv  363 (376)
T KOG1372|consen  332 EVDTLQGDASKAKKTLGWKPKVT-FPELVKEMV  363 (376)
T ss_pred             hhhhhcCChHHHHHhhCCCCccC-HHHHHHHHH
Confidence            0122233578896 499999998 999999986

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.84  E-value=1.7e-19  Score=156.66  Aligned_cols=221  Identities=16%  Similarity=0.019  Sum_probs=142.0

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccc-----cCCCCCccccCcccccCcchHHhhcc-------C
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL-----IFPGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~~~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (363)
                      ++|+||||||||++|++|+++|+++|++|+++.|+..+...     .........+..+|+.+.+++.++++       +
T Consensus         5 ~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~   84 (249)
T PRK12825          5 MGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFGR   84 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcCC
Confidence            45699999999999999999999999999888877653211     11111112245679988888776654       5


Q ss_pred             CCEEEEccCCCCCCC---CChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchh
Q 017977          117 STAVVNLAGTPIGTR---WSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYC  191 (363)
Q Consensus       117 ~d~Vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~  191 (363)
                      +|+|||+||......   ...+.....++.|+.++.++++.+.+.  ..+.+++|++||.+..++       .+....|.
T Consensus        85 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~-------~~~~~~y~  157 (249)
T PRK12825         85 IDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPG-------WPGRSNYA  157 (249)
T ss_pred             CCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCC-------CCCchHHH
Confidence            799999999643222   244556778999999999999888421  156788999999844322       11222343


Q ss_pred             hhhhhcccchhhHHHHHHHHHHHhc--cCCCceEEEEeeceEEeCCCCcccchHHHHHHH-hCCCCCCCCCccccccHHH
Q 017977          192 AKVYCLVSFNRGVLVCREWEGTALK--VNKDVRLALIRIGIVLGKDGGALAKMIPLFMMF-AGGPLGSGQQWFSWIHLDD  268 (363)
Q Consensus       192 ~~~~~~~~y~~~k~~~~~~~~~~~~--~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v~D  268 (363)
                      .+          |.....+......  ...+++++++||+.++++......  ....... ...+      ...+++++|
T Consensus       158 ~s----------K~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~--~~~~~~~~~~~~------~~~~~~~~d  219 (249)
T PRK12825        158 AA----------KAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATI--EEAREAKDAETP------LGRSGTPED  219 (249)
T ss_pred             HH----------HHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCcccccc--chhHHhhhccCC------CCCCcCHHH
Confidence            33          3222222111111  123899999999999998643211  1111111 0111      123899999


Q ss_pred             HHHHHHHHhcCCC--C-CceEEeeCCCCc
Q 017977          269 IVNLIYEALSNPS--Y-RGVINGTAPNPV  294 (363)
Q Consensus       269 ~a~a~~~~~~~~~--~-~g~~~i~~~~~~  294 (363)
                      +++++..++++..  . +.+|+++++..+
T Consensus       220 va~~~~~~~~~~~~~~~g~~~~i~~g~~~  248 (249)
T PRK12825        220 IARAVAFLCSDASDYITGQVIEVTGGVDV  248 (249)
T ss_pred             HHHHHHHHhCccccCcCCCEEEeCCCEee
Confidence            9999999997653  2 349999987543

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.84  E-value=6.5e-20  Score=160.65  Aligned_cols=223  Identities=15%  Similarity=0.072  Sum_probs=141.9

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccC----CCCCccccCcccccCcchHHhhcc-------CCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GST  118 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~~d  118 (363)
                      ++++|||||+|+||+++++.|+++|++|++++|++.......    ..........+|+.|.+++.++++       ++|
T Consensus         7 ~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d   86 (262)
T PRK13394          7 GKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSVD   86 (262)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            468999999999999999999999999999999885433221    111112245689998888776654       489


Q ss_pred             EEEEccCCCCCC---CCChhhHHHHHHHHHHH----HHHHHHHH-HhCCCCCCCeEEEeccceecCCcccccccCCCcch
Q 017977          119 AVVNLAGTPIGT---RWSSEIKKEIKESRIRV----TSKVVDLI-NESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDY  190 (363)
Q Consensus       119 ~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~----~~~l~~~~-~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~  190 (363)
                      +|||+|+.....   ....+..+..+++|+.+    +.++++++ +.  .+.+++|++||..+.++       .+....|
T Consensus        87 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~--~~~~~iv~~ss~~~~~~-------~~~~~~y  157 (262)
T PRK13394         87 ILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKD--DRGGVVIYMGSVHSHEA-------SPLKSAY  157 (262)
T ss_pred             EEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhh--cCCcEEEEEcchhhcCC-------CCCCccc
Confidence            999999974321   22345567788999999    66677777 55  56788999998743222       2233455


Q ss_pred             hhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHH--------hCCCCCCCCCccc
Q 017977          191 CAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMF--------AGGPLGSGQQWFS  262 (363)
Q Consensus       191 ~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~  262 (363)
                      ..+|.....+.+      .+ ..... ..+++++++||+.++++.....   ++.....        ....+..+....+
T Consensus       158 ~~sk~a~~~~~~------~l-a~~~~-~~~i~v~~v~pg~v~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (262)
T PRK13394        158 VTAKHGLLGLAR------VL-AKEGA-KHNVRSHVVCPGFVRTPLVDKQ---IPEQAKELGISEEEVVKKVMLGKTVDGV  226 (262)
T ss_pred             HHHHHHHHHHHH------HH-HHHhh-hcCeEEEEEeeCcccchhhhhh---hHhhhhccCCChHHHHHHHHhcCCCCCC
Confidence            555432211111      01 11111 1389999999999998853110   1100000        0000112334567


Q ss_pred             cccHHHHHHHHHHHhcCCC--CCc-eEEeeCCC
Q 017977          263 WIHLDDIVNLIYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       263 ~i~v~D~a~a~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      +++++|+|++++.+++...  ..| .|++.++.
T Consensus       227 ~~~~~dva~a~~~l~~~~~~~~~g~~~~~~~g~  259 (262)
T PRK13394        227 FTTVEDVAQTVLFLSSFPSAALTGQSFVVSHGW  259 (262)
T ss_pred             CCCHHHHHHHHHHHcCccccCCcCCEEeeCCce
Confidence            9999999999999987543  234 67777653

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.84  E-value=8.9e-20  Score=159.31  Aligned_cols=228  Identities=12%  Similarity=0.053  Sum_probs=147.0

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCC-CCccccCcccccCcchHHhhcc-------CCCEEE
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV  121 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~d~Vi  121 (363)
                      .++++||||+|+||+++++.|+++|++|++++|+.......... ........+|+.|.+++.++++       .+|+||
T Consensus         6 ~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li   85 (257)
T PRK07067          6 GKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDILF   85 (257)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            46899999999999999999999999999999988654432211 1112244679999888876664       579999


Q ss_pred             EccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CC-CCCCeEEEeccceecCCcccccccCCCcchhhhhh
Q 017977          122 NLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PE-GVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVY  195 (363)
Q Consensus       122 ~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~-~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~  195 (363)
                      |+|+.....   ....+..+..+++|+.++.++++++.+.  .. ...++|++||..+.++       .++...|..+|.
T Consensus        86 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~-------~~~~~~Y~~sK~  158 (257)
T PRK07067         86 NNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRG-------EALVSHYCATKA  158 (257)
T ss_pred             ECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCC-------CCCCchhhhhHH
Confidence            999864321   2244567788999999999999998652  11 1246999999755443       233345555432


Q ss_pred             hcccchhhHHHHHHHHHHHhc--cCCCceEEEEeeceEEeCCCCcccchHHHHH----HHhCCCCCCCCCccccccHHHH
Q 017977          196 CLVSFNRGVLVCREWEGTALK--VNKDVRLALIRIGIVLGKDGGALAKMIPLFM----MFAGGPLGSGQQWFSWIHLDDI  269 (363)
Q Consensus       196 ~~~~y~~~k~~~~~~~~~~~~--~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~v~D~  269 (363)
                      .          .....+....  ...|+++++++|+.++++........+....    ......+........+++++|+
T Consensus       159 a----------~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  228 (257)
T PRK07067        159 A----------VISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAVPLGRMGVPDDL  228 (257)
T ss_pred             H----------HHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhhcCCCCCccCHHHH
Confidence            2          2222111111  1248999999999999874321111111000    0000001222334568999999


Q ss_pred             HHHHHHHhcCCC---CCceEEeeCCCCc
Q 017977          270 VNLIYEALSNPS---YRGVINGTAPNPV  294 (363)
Q Consensus       270 a~a~~~~~~~~~---~~g~~~i~~~~~~  294 (363)
                      |+++..++....   .+.+|++.+|+.+
T Consensus       229 a~~~~~l~s~~~~~~~g~~~~v~gg~~~  256 (257)
T PRK07067        229 TGMALFLASADADYIVAQTYNVDGGNWM  256 (257)
T ss_pred             HHHHHHHhCcccccccCcEEeecCCEeC
Confidence            999999997653   3449999887654

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.84  E-value=3.6e-20  Score=163.41  Aligned_cols=240  Identities=10%  Similarity=-0.028  Sum_probs=152.5

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCC-CCccccCcccccCcchHHhhcc-------CCCEEE
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV  121 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~d~Vi  121 (363)
                      +++|+||||+|+||++++++|+++|++|++++|+.+........ ........+|+.|.+++.++++       ++|+||
T Consensus         3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi   82 (275)
T PRK08263          3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVV   82 (275)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            46899999999999999999999999999999987654332211 1112234689998888766554       579999


Q ss_pred             EccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhhhhh
Q 017977          122 NLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYC  196 (363)
Q Consensus       122 ~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~  196 (363)
                      |+||.....   ....+..+..+++|+.++.++++++.+.  ..+.+++|++||.++..+       .+....|..+   
T Consensus        83 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~-------~~~~~~Y~~s---  152 (275)
T PRK08263         83 NNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISA-------FPMSGIYHAS---  152 (275)
T ss_pred             ECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCC-------CCCccHHHHH---
Confidence            999975332   2345667889999999988888776321  145678999999843322       1222345544   


Q ss_pred             cccchhhHHHHHHHHHHHhc--cCCCceEEEEeeceEEeCCCCc-c--cchHHHHHHHhCCCCCCCCCcccc-ccHHHHH
Q 017977          197 LVSFNRGVLVCREWEGTALK--VNKDVRLALIRIGIVLGKDGGA-L--AKMIPLFMMFAGGPLGSGQQWFSW-IHLDDIV  270 (363)
Q Consensus       197 ~~~y~~~k~~~~~~~~~~~~--~~~~~~~~ilRp~~v~g~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~-i~v~D~a  270 (363)
                             |............  ...|++++++||+.+..+..+. .  ......+..... .+........+ ++++|+|
T Consensus       153 -------Kaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~p~dva  224 (275)
T PRK08263        153 -------KWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLRE-ELAEQWSERSVDGDPEAAA  224 (275)
T ss_pred             -------HHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHH-HHHHHHHhccCCCCHHHHH
Confidence                   3222222211111  1248999999999887764311 0  000000000000 00000111235 8899999


Q ss_pred             HHHHHHhcCCCCCceEEeeCC-CCcCHHHHHHHHHHHh
Q 017977          271 NLIYEALSNPSYRGVINGTAP-NPVRLAEMCDHLGNVL  307 (363)
Q Consensus       271 ~a~~~~~~~~~~~g~~~i~~~-~~~s~~el~~~i~~~~  307 (363)
                      ++++.+++.+...+.|+++++ ..+++.++.+.+.+..
T Consensus       225 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (275)
T PRK08263        225 EALLKLVDAENPPLRLFLGSGVLDLAKADYERRLATWE  262 (275)
T ss_pred             HHHHHHHcCCCCCeEEEeCchHHHHHHHHHHHHHHHHH
Confidence            999999998776666666554 5688888888887753

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.83  E-value=3.1e-19  Score=155.25  Aligned_cols=222  Identities=17%  Similarity=0.059  Sum_probs=142.7

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccc----cCCCCCccccCcccccCcchHHhhcc-------CC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL----IFPGKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (363)
                      ++|+|+||||+|++|++++++|+++|++|++++|+..+...    +...........+|+.|.+++.++++       .+
T Consensus         5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   84 (251)
T PRK12826          5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRL   84 (251)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            34689999999999999999999999999999998644321    11111112244579989888877765       68


Q ss_pred             CEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhh
Q 017977          118 TAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCA  192 (363)
Q Consensus       118 d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~  192 (363)
                      |+|||+++.....   ....+.....++.|+.++.++++++...  ..+.+++|++||..+ ++     ...+..+.|..
T Consensus        85 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~-~~-----~~~~~~~~y~~  158 (251)
T PRK12826         85 DILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAG-PR-----VGYPGLAHYAA  158 (251)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHh-hc-----cCCCCccHHHH
Confidence            9999999874331   2344556778999999999999887421  145678999998833 21     11122234444


Q ss_pred             hhhhcccchhhHHHHHHHHHHHhc--cCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHH
Q 017977          193 KVYCLVSFNRGVLVCREWEGTALK--VNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIV  270 (363)
Q Consensus       193 ~~~~~~~y~~~k~~~~~~~~~~~~--~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  270 (363)
                      +          |............  ...+++++++||+.++|+..................++      ..+++++|+|
T Consensus       159 s----------K~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~dva  222 (251)
T PRK12826        159 S----------KAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDAQWAEAIAAAIPL------GRLGEPEDIA  222 (251)
T ss_pred             H----------HHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCchHHHHHHHhcCCC------CCCcCHHHHH
Confidence            4          3222222222111  12389999999999999864322111000111122222      1479999999


Q ss_pred             HHHHHHhcCCC---CCceEEeeCCC
Q 017977          271 NLIYEALSNPS---YRGVINGTAPN  292 (363)
Q Consensus       271 ~a~~~~~~~~~---~~g~~~i~~~~  292 (363)
                      +++..++....   .+.+|++.+|.
T Consensus       223 ~~~~~l~~~~~~~~~g~~~~~~~g~  247 (251)
T PRK12826        223 AAVLFLASDEARYITGQTLPVDGGA  247 (251)
T ss_pred             HHHHHHhCccccCcCCcEEEECCCc
Confidence            99999886543   23488887764

>PRK09135 pteridine reductase; Provisional

Probab=99.83  E-value=5.6e-19  Score=153.45  Aligned_cols=222  Identities=13%  Similarity=0.094  Sum_probs=137.8

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcc-ccc----CC-CCCccccCcccccCcchHHhhcc-------C
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-ELI----FP-GKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~----~~-~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (363)
                      .++|+||||+|+||++++++|+++|++|++++|+..+. +..    .. ......+..+|+.|.+++..+++       +
T Consensus         6 ~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   85 (249)
T PRK09135          6 AKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFGR   85 (249)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            36899999999999999999999999999999875331 111    10 01112245679999888877665       4


Q ss_pred             CCEEEEccCCCCCCC---CChhhHHHHHHHHHHHHHHHHHHHHhC-CCCCCCeEEEeccceecCCcccccccCCCcchhh
Q 017977          117 STAVVNLAGTPIGTR---WSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCA  192 (363)
Q Consensus       117 ~d~Vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~  192 (363)
                      +|+|||+|+......   ...+..+.++++|+.++.++++++.+. ......++++++..   +    ....++...|..
T Consensus        86 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~---~----~~~~~~~~~Y~~  158 (249)
T PRK09135         86 LDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIH---A----ERPLKGYPVYCA  158 (249)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChh---h----cCCCCCchhHHH
Confidence            799999999643221   234556789999999999999999753 11223455555431   1    011122233444


Q ss_pred             hhhhcccchhhHHHHHHHHHHHhcc-CCCceEEEEeeceEEeCCCCc-ccchHHHHHHHhCCCCCCCCCccccccHHHHH
Q 017977          193 KVYCLVSFNRGVLVCREWEGTALKV-NKDVRLALIRIGIVLGKDGGA-LAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIV  270 (363)
Q Consensus       193 ~~~~~~~y~~~k~~~~~~~~~~~~~-~~~~~~~ilRp~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  270 (363)
                                +|...+......... ..+++++++||+.++|+.... +..... .....+.++      ..+.+++|+|
T Consensus       159 ----------sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~~-~~~~~~~~~------~~~~~~~d~a  221 (249)
T PRK09135        159 ----------AKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDGNSFDEEAR-QAILARTPL------KRIGTPEDIA  221 (249)
T ss_pred             ----------HHHHHHHHHHHHHHHHCCCCeEEEEEeccccCccccccCCHHHH-HHHHhcCCc------CCCcCHHHHH
Confidence                      443333333322222 126999999999999997532 111111 111222222      1134589999


Q ss_pred             HHHHHHhcCCC--CCceEEeeCCCCcC
Q 017977          271 NLIYEALSNPS--YRGVINGTAPNPVR  295 (363)
Q Consensus       271 ~a~~~~~~~~~--~~g~~~i~~~~~~s  295 (363)
                      +++..++....  .+.+|++.++..++
T Consensus       222 ~~~~~~~~~~~~~~g~~~~i~~g~~~~  248 (249)
T PRK09135        222 EAVRFLLADASFITGQILAVDGGRSLT  248 (249)
T ss_pred             HHHHHHcCccccccCcEEEECCCeecc
Confidence            99977665433  34489999987654

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.83  E-value=5.1e-19  Score=156.16  Aligned_cols=223  Identities=13%  Similarity=0.007  Sum_probs=139.7

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCC-CccccCcccccCcchHHhhcc-------CCCEEE
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK-KTRFFPGVMIAEEPQWRDCIQ-------GSTAVV  121 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~-------~~d~Vi  121 (363)
                      +++|+||||+|+||++++++|+++|++|++++|++.....+.... .......+|+.|.+++.++++       ++|+||
T Consensus         4 ~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~vv   83 (277)
T PRK06180          4 MKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVLV   83 (277)
T ss_pred             CCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEEE
Confidence            468999999999999999999999999999999876544332211 111234579999888877665       579999


Q ss_pred             EccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhhhhh
Q 017977          122 NLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYC  196 (363)
Q Consensus       122 ~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~  196 (363)
                      |+||.....   ....+..+..+++|+.++.++++++.+.  ..+.+++|++||.++..+       .+....|..+|. 
T Consensus        84 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~-------~~~~~~Y~~sK~-  155 (277)
T PRK06180         84 NNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLIT-------MPGIGYYCGSKF-  155 (277)
T ss_pred             ECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCC-------CCCcchhHHHHH-
Confidence            999974332   2233445677999999999999986432  145567999999844322       223344555432 


Q ss_pred             cccchhhHHHHHHHHHHHhc--cCCCceEEEEeeceEEeCCCCc--------ccchHHHHHHHhCCCCCCCCCccccccH
Q 017977          197 LVSFNRGVLVCREWEGTALK--VNKDVRLALIRIGIVLGKDGGA--------LAKMIPLFMMFAGGPLGSGQQWFSWIHL  266 (363)
Q Consensus       197 ~~~y~~~k~~~~~~~~~~~~--~~~~~~~~ilRp~~v~g~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~v  266 (363)
                               ....+......  ...|++++++||+.+.++..+.        .......+........  ......+..+
T Consensus       156 ---------a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  224 (277)
T PRK06180        156 ---------ALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQARE--AKSGKQPGDP  224 (277)
T ss_pred             ---------HHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHH--hhccCCCCCH
Confidence                     22222111111  1238999999999997753211        0111111110000000  0111235789


Q ss_pred             HHHHHHHHHHhcCCCCCceEEeeCC
Q 017977          267 DDIVNLIYEALSNPSYRGVINGTAP  291 (363)
Q Consensus       267 ~D~a~a~~~~~~~~~~~g~~~i~~~  291 (363)
                      +|+|++++.++..+.....|.++..
T Consensus       225 ~dva~~~~~~l~~~~~~~~~~~g~~  249 (277)
T PRK06180        225 AKAAQAILAAVESDEPPLHLLLGSD  249 (277)
T ss_pred             HHHHHHHHHHHcCCCCCeeEeccHH
Confidence            9999999999987665445544443

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.82  E-value=2.9e-19  Score=155.88  Aligned_cols=222  Identities=16%  Similarity=0.054  Sum_probs=139.0

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCC----CCCccccCcccccCcchHHhh-------ccCCCE
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDC-------IQGSTA  119 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~-------~~~~d~  119 (363)
                      ++||||||+|+||+++++.|+++|++|++++|+......+..    .........+|+.|.+++..+       +.++|+
T Consensus         2 ~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   81 (255)
T TIGR01963         2 KTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLDI   81 (255)
T ss_pred             CEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            589999999999999999999999999999998754432211    111122445799988855443       446899


Q ss_pred             EEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhhh
Q 017977          120 VVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKV  194 (363)
Q Consensus       120 Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~  194 (363)
                      |||+++.....   ....+..+..++.|+.++..+++++.+.  ..+.+++|++||.++..+       .+..+.|..+|
T Consensus        82 vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~-------~~~~~~y~~sk  154 (255)
T TIGR01963        82 LVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVA-------SPFKSAYVAAK  154 (255)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCC-------CCCCchhHHHH
Confidence            99999874321   2234455677889999988887776321  156778999998743322       12223444443


Q ss_pred             hhcccchhhHHHHHHHHHHHh-c-cCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCC--------CCCCCCCccccc
Q 017977          195 YCLVSFNRGVLVCREWEGTAL-K-VNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGG--------PLGSGQQWFSWI  264 (363)
Q Consensus       195 ~~~~~y~~~k~~~~~~~~~~~-~-~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~i  264 (363)
                      .          ....+..... . ...+++++++||+.++++....   .........+.        .+..+...++++
T Consensus       155 ~----------a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (255)
T TIGR01963       155 H----------GLIGLTKVLALEVAAHGITVNAICPGYVRTPLVEK---QIADQAKTRGIPEEQVIREVMLPGQPTKRFV  221 (255)
T ss_pred             H----------HHHHHHHHHHHHhhhcCeEEEEEecCccccHHHHH---HHHhhhcccCCCchHHHHHHHHccCccccCc
Confidence            2          2121111111 1 1238999999999999874211   01100000000        011234456799


Q ss_pred             cHHHHHHHHHHHhcCCC--C-CceEEeeCCC
Q 017977          265 HLDDIVNLIYEALSNPS--Y-RGVINGTAPN  292 (363)
Q Consensus       265 ~v~D~a~a~~~~~~~~~--~-~g~~~i~~~~  292 (363)
                      +++|+|++++.++....  . +..|++.++.
T Consensus       222 ~~~d~a~~~~~~~~~~~~~~~g~~~~~~~g~  252 (255)
T TIGR01963       222 TVDEVAETALFLASDAAAGITGQAIVLDGGW  252 (255)
T ss_pred             CHHHHHHHHHHHcCccccCccceEEEEcCcc
Confidence            99999999999997642  2 3478888753

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.82  E-value=8e-19  Score=154.92  Aligned_cols=237  Identities=19%  Similarity=0.114  Sum_probs=150.2

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCC------CCccccCcccccCcchHHhhcc-------C
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG------KKTRFFPGVMIAEEPQWRDCIQ-------G  116 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~~~-------~  116 (363)
                      .++|+||||+|+||+++++.|+++|++|++++|+..+.......      ........+|+.|.+++.++++       +
T Consensus         7 ~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   86 (276)
T PRK05875          7 DRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHGR   86 (276)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            46999999999999999999999999999999986543222110      0111234579988888877665       6


Q ss_pred             CCEEEEccCCCCC----CCCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcch
Q 017977          117 STAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDY  190 (363)
Q Consensus       117 ~d~Vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~  190 (363)
                      +|+|||+|+....    ...+.+.....+++|+.++.++++++.+.  ..+..++|++||.+ .+.      ..+....|
T Consensus        87 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~-~~~------~~~~~~~Y  159 (276)
T PRK05875         87 LHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIA-ASN------THRWFGAY  159 (276)
T ss_pred             CCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechh-hcC------CCCCCcch
Confidence            8999999985321    12334456778899999999998877652  12345799999883 221      12233445


Q ss_pred             hhhhhhcccchhhHHHHHHHHHHHhcc--CCCceEEEEeeceEEeCCCCcccchHHHH-HHHhCCCCCCCCCccccccHH
Q 017977          191 CAKVYCLVSFNRGVLVCREWEGTALKV--NKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLD  267 (363)
Q Consensus       191 ~~~~~~~~~y~~~k~~~~~~~~~~~~~--~~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~  267 (363)
                      ..+|.          ....+.......  ..+++++++||+.+.++............ ......+      ...+++++
T Consensus       160 ~~sK~----------a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~  223 (276)
T PRK05875        160 GVTKS----------AVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITESPELSADYRACTP------LPRVGEVE  223 (276)
T ss_pred             HHHHH----------HHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccCHHHHHHHHcCCC------CCCCcCHH
Confidence            55432          222222211111  13899999999998776432111100111 1111111      22367899


Q ss_pred             HHHHHHHHHhcCCCC---CceEEeeCCCCc----CHHHHHHHHHHHhCC
Q 017977          268 DIVNLIYEALSNPSY---RGVINGTAPNPV----RLAEMCDHLGNVLGR  309 (363)
Q Consensus       268 D~a~a~~~~~~~~~~---~g~~~i~~~~~~----s~~el~~~i~~~~g~  309 (363)
                      |+|+++..+++++..   +.++++.++..+    +..|+++.+.+..|.
T Consensus       224 dva~~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  272 (276)
T PRK05875        224 DVANLAMFLLSDAASWITGQVINVDGGHMLRRGPDFSSMLEPVFGADGL  272 (276)
T ss_pred             HHHHHHHHHcCchhcCcCCCEEEECCCeeccCCccHHHHHHHHhhHHHH
Confidence            999999999987552   348999888765    666666666655443

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.82  E-value=3.3e-19  Score=157.75  Aligned_cols=228  Identities=14%  Similarity=0.016  Sum_probs=142.8

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCC------CCCccccCcccccCcchHHh---h---ccCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP------GKKTRFFPGVMIAEEPQWRD---C---IQGS  117 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~------~~~~~~~~~~d~~~~~~~~~---~---~~~~  117 (363)
                      +++++||||+|++|+++++.|+++|++|++++|+++.......      ......+..+|+.|.+++..   +   +.++
T Consensus         3 ~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~i   82 (280)
T PRK06914          3 KKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKEIGRI   82 (280)
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHhcCCe
Confidence            3579999999999999999999999999999998765332211      01112244679998887764   1   2357


Q ss_pred             CEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhh
Q 017977          118 TAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCA  192 (363)
Q Consensus       118 d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~  192 (363)
                      |+|||+||.....   ....+..+..+++|+.++.++++++...  ..+.+++|++||.++.++       .+....|..
T Consensus        83 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~-------~~~~~~Y~~  155 (280)
T PRK06914         83 DLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVG-------FPGLSPYVS  155 (280)
T ss_pred             eEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCC-------CCCCchhHH
Confidence            9999999874432   2234556778899999988888886321  145678999998755444       223334544


Q ss_pred             hhhhcccchhhHHHHHHHHHHHh--ccCCCceEEEEeeceEEeCCCCcc-----------cchHHHHHHHhCCCCCCCCC
Q 017977          193 KVYCLVSFNRGVLVCREWEGTAL--KVNKDVRLALIRIGIVLGKDGGAL-----------AKMIPLFMMFAGGPLGSGQQ  259 (363)
Q Consensus       193 ~~~~~~~y~~~k~~~~~~~~~~~--~~~~~~~~~ilRp~~v~g~~~~~~-----------~~~~~~~~~~~~~~~~~~~~  259 (363)
                      +|          .....+.....  ....+++++++||+.+.++.....           ......+..... .+  ...
T Consensus       156 sK----------~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~  222 (280)
T PRK06914        156 SK----------YALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQK-HI--NSG  222 (280)
T ss_pred             hH----------HHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHH-HH--hhh
Confidence            43          22222211111  112389999999999987732100           000011100000 00  011


Q ss_pred             ccccccHHHHHHHHHHHhcCCCCCceEEeeCCCCcCHH
Q 017977          260 WFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLA  297 (363)
Q Consensus       260 ~~~~i~v~D~a~a~~~~~~~~~~~g~~~i~~~~~~s~~  297 (363)
                      ...+++++|+|++++.+++++.....|+++++..+++.
T Consensus       223 ~~~~~~~~dva~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (280)
T PRK06914        223 SDTFGNPIDVANLIVEIAESKRPKLRYPIGKGVKLMIL  260 (280)
T ss_pred             hhccCCHHHHHHHHHHHHcCCCCCcccccCCchHHHHH
Confidence            23478999999999999998775567888876544443

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.82  E-value=1.3e-18  Score=143.33  Aligned_cols=206  Identities=13%  Similarity=0.071  Sum_probs=145.5

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCC--ccccCcccccCcchHHhhc-------cCCCEE
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKK--TRFFPGVMIAEEPQWRDCI-------QGSTAV  120 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~-------~~~d~V  120 (363)
                      .|.++|||||+.||.++++.|.+.|++|+++.|+.++.+.+.....  ......+|++|.+++..++       .++|++
T Consensus         6 ~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDiL   85 (246)
T COG4221           6 GKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDIL   85 (246)
T ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccEE
Confidence            3689999999999999999999999999999999988776654433  2334568999998865554       368999


Q ss_pred             EEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhhhh
Q 017977          121 VNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVY  195 (363)
Q Consensus       121 i~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~  195 (363)
                      ||+||.....   ....+.++.++++|+.|..+..++....  ..+..++|.+||.++.|.       .+..+-|+++|+
T Consensus        86 vNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~-------y~~~~vY~ATK~  158 (246)
T COG4221          86 VNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYP-------YPGGAVYGATKA  158 (246)
T ss_pred             EecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEecccccccc-------CCCCccchhhHH
Confidence            9999986542   2356778899999999988888887654  244558999999976443       555667777653


Q ss_pred             hcccchhhHHHHHHHHHHHhcc--CCCceEEEEeeceEEeCCCCcc--cchHHHH-HHHhCCCCCCCCCccccccHHHHH
Q 017977          196 CLVSFNRGVLVCREWEGTALKV--NKDVRLALIRIGIVLGKDGGAL--AKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIV  270 (363)
Q Consensus       196 ~~~~y~~~k~~~~~~~~~~~~~--~~~~~~~ilRp~~v~g~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a  270 (363)
                      .          ...........  ..+++++.+-||.+-.......  ..-.... ..+.         ....+..+|+|
T Consensus       159 a----------V~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~~~~~~~~y~---------~~~~l~p~dIA  219 (246)
T COG4221         159 A----------VRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGDDERADKVYK---------GGTALTPEDIA  219 (246)
T ss_pred             H----------HHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCchhhhHHHHhc---------cCCCCCHHHHH
Confidence            3          33322222222  2389999999999865432111  0000111 1111         22478999999


Q ss_pred             HHHHHHhcCCC
Q 017977          271 NLIYEALSNPS  281 (363)
Q Consensus       271 ~a~~~~~~~~~  281 (363)
                      +++.++++.|.
T Consensus       220 ~~V~~~~~~P~  230 (246)
T COG4221         220 EAVLFAATQPQ  230 (246)
T ss_pred             HHHHHHHhCCC
Confidence            99999999887

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.82  E-value=4.2e-19  Score=155.12  Aligned_cols=222  Identities=14%  Similarity=0.050  Sum_probs=138.7

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCC----CCCccccCcccccCcchHHhhcc-------CCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GST  118 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~d  118 (363)
                      +++|+||||+|+||++++++|+++|++|++++|++.+......    .........+|+.|.+++.++++       ++|
T Consensus         4 ~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d   83 (258)
T PRK12429          4 GKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGVD   83 (258)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            3689999999999999999999999999999998765433211    11112244579999888876665       589


Q ss_pred             EEEEccCCCCCC---CCChhhHHHHHHHHHHHHHH----HHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchh
Q 017977          119 AVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSK----VVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYC  191 (363)
Q Consensus       119 ~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~----l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~  191 (363)
                      +|||+|+.....   ....+..+..+++|+.++.+    ++.++.+  .+.+++|++||..+.++       .+..+.|.
T Consensus        84 ~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~~iv~iss~~~~~~-------~~~~~~y~  154 (258)
T PRK12429         84 ILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKA--QGGGRIINMASVHGLVG-------SAGKAAYV  154 (258)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHh--cCCeEEEEEcchhhccC-------CCCcchhH
Confidence            999999864332   12334456678899999544    4455555  56788999999854443       22334555


Q ss_pred             hhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCC--------CCCCCCcccc
Q 017977          192 AKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGP--------LGSGQQWFSW  263 (363)
Q Consensus       192 ~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~  263 (363)
                      ..|.....+.+       .....+. ..++.++++||+.++++.....   ........+.+        +......+.+
T Consensus       155 ~~k~a~~~~~~-------~l~~~~~-~~~i~v~~~~pg~v~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (258)
T PRK12429        155 SAKHGLIGLTK-------VVALEGA-THGVTVNAICPGYVDTPLVRKQ---IPDLAKERGISEEEVLEDVLLPLVPQKRF  223 (258)
T ss_pred             HHHHHHHHHHH-------HHHHHhc-ccCeEEEEEecCCCcchhhhhh---hhhhccccCCChHHHHHHHHhccCCcccc
Confidence            44322211111       1111111 2389999999999998753110   00000000000        1112233569


Q ss_pred             ccHHHHHHHHHHHhcCCC--CCc-eEEeeCC
Q 017977          264 IHLDDIVNLIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       264 i~v~D~a~a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      ++++|+|+++..++....  ..| .|++.++
T Consensus       224 ~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g  254 (258)
T PRK12429        224 TTVEEIADYALFLASFAAKGVTGQAWVVDGG  254 (258)
T ss_pred             CCHHHHHHHHHHHcCccccCccCCeEEeCCC
Confidence            999999999999986543  334 6777765

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.81  E-value=9.2e-19  Score=151.76  Aligned_cols=219  Identities=17%  Similarity=0.097  Sum_probs=141.2

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccC----CCCCccccCcccccCcchHHhhcc-------CCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GST  118 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~~d  118 (363)
                      +++|+||||+|++|+++++.|+++|++|++++|++.+.....    .......+..+|+.|.+++..+++       .+|
T Consensus         5 ~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   84 (246)
T PRK05653          5 GKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGALD   84 (246)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence            468999999999999999999999999999999876533221    111112244579998887776665       469


Q ss_pred             EEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhh
Q 017977          119 AVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAK  193 (363)
Q Consensus       119 ~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~  193 (363)
                      +|||+++.....   ....+.....++.|+.++.++++++.+.  ..+.+++|++||.++.++       ......|..+
T Consensus        85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~-------~~~~~~y~~s  157 (246)
T PRK05653         85 ILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTG-------NPGQTNYSAA  157 (246)
T ss_pred             EEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccC-------CCCCcHhHhH
Confidence            999999874331   2234445678899999999998888532  146678999998854333       1222334433


Q ss_pred             hhhcccchhhHHHHHHHHHHHhc--cCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHH
Q 017977          194 VYCLVSFNRGVLVCREWEGTALK--VNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVN  271 (363)
Q Consensus       194 ~~~~~~y~~~k~~~~~~~~~~~~--~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  271 (363)
                                |............  ...+++++++||+.++++........... ......      ....+++++|+|+
T Consensus       158 ----------k~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~-~~~~~~------~~~~~~~~~dva~  220 (246)
T PRK05653        158 ----------KAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEGLPEEVKA-EILKEI------PLGRLGQPEEVAN  220 (246)
T ss_pred             ----------HHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhhhHHHHH-HHHhcC------CCCCCcCHHHHHH
Confidence                      3222222121111  12389999999999998864321111111 111111      1245789999999


Q ss_pred             HHHHHhcCCC--CCc-eEEeeCCC
Q 017977          272 LIYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       272 a~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      ++..++....  ..| .|++.+|.
T Consensus       221 ~~~~~~~~~~~~~~g~~~~~~gg~  244 (246)
T PRK05653        221 AVAFLASDAASYITGQVIPVNGGM  244 (246)
T ss_pred             HHHHHcCchhcCccCCEEEeCCCe
Confidence            9999986533  234 88888764

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.81  E-value=6.1e-19  Score=153.82  Aligned_cols=226  Identities=15%  Similarity=0.112  Sum_probs=143.8

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccC----CCCCccccCcccccCcchHHhhcc-------CC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (363)
                      .+++||||||+|+||++++++|+++|++|++++|+..+.....    ..........+|+.|.+++.++++       .+
T Consensus         9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   88 (255)
T PRK07523          9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPI   88 (255)
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            3479999999999999999999999999999999875533221    111112244579999888877764       47


Q ss_pred             CEEEEccCCCCCCC---CChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhh
Q 017977          118 TAVVNLAGTPIGTR---WSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCA  192 (363)
Q Consensus       118 d~Vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~  192 (363)
                      |+|||+++......   ...+..+..+++|+.++.++++++.+.  ..+.+++|++||.....       ..+....|..
T Consensus        89 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~-------~~~~~~~y~~  161 (255)
T PRK07523         89 DILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSAL-------ARPGIAPYTA  161 (255)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhcc-------CCCCCccHHH
Confidence            99999999753322   234455778899999999999988753  13456799999873211       1223345555


Q ss_pred             hhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHH-hCCCCCCCCCccccccHHHHHH
Q 017977          193 KVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMF-AGGPLGSGQQWFSWIHLDDIVN  271 (363)
Q Consensus       193 ~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v~D~a~  271 (363)
                      +|.+...+.++      +.. .+. .+|++++++||+.+.++............... ...+      ...+..++|+|+
T Consensus       162 sK~a~~~~~~~------~a~-e~~-~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~dva~  227 (255)
T PRK07523        162 TKGAVGNLTKG------MAT-DWA-KHGLQCNAIAPGYFDTPLNAALVADPEFSAWLEKRTP------AGRWGKVEELVG  227 (255)
T ss_pred             HHHHHHHHHHH------HHH-Hhh-HhCeEEEEEEECcccCchhhhhccCHHHHHHHHhcCC------CCCCcCHHHHHH
Confidence            54322222111      111 111 23899999999999987432110000111111 1112      223678999999


Q ss_pred             HHHHHhcCCC--CCc-eEEeeCCCCcC
Q 017977          272 LIYEALSNPS--YRG-VINGTAPNPVR  295 (363)
Q Consensus       272 a~~~~~~~~~--~~g-~~~i~~~~~~s  295 (363)
                      +++.++....  ..| .+++.++...|
T Consensus       228 ~~~~l~~~~~~~~~G~~i~~~gg~~~~  254 (255)
T PRK07523        228 ACVFLASDASSFVNGHVLYVDGGITAS  254 (255)
T ss_pred             HHHHHcCchhcCccCcEEEECCCeecc
Confidence            9999997543  334 88888775443

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.81  E-value=1.2e-18  Score=153.43  Aligned_cols=222  Identities=14%  Similarity=0.081  Sum_probs=139.5

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccC----CCCCccccCcccccCcchHHhhcc-------C
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (363)
                      ..+++++||||+|+||++++++|+++|++|++++|+........    ..........+|+.+.+++.++++       +
T Consensus         8 ~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   87 (274)
T PRK07775          8 PDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGE   87 (274)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            34468999999999999999999999999999999765432211    111112234579999888876664       5


Q ss_pred             CCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchh
Q 017977          117 STAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYC  191 (363)
Q Consensus       117 ~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~  191 (363)
                      +|+|||+||.....   ....+..+..+++|+.++.++++++.+.  ..+..++|++||. ..+..      .+....|.
T Consensus        88 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~-~~~~~------~~~~~~Y~  160 (274)
T PRK07775         88 IEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSD-VALRQ------RPHMGAYG  160 (274)
T ss_pred             CCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECCh-HhcCC------CCCcchHH
Confidence            79999999874321   2234556777899999999998887531  1345579999998 33321      12223444


Q ss_pred             hhhhhcccchhhHHHHHHHHHHHhc--cCCCceEEEEeeceEEeCCCCc-ccc-hHHHHHHHhCCCCCCCCCccccccHH
Q 017977          192 AKVYCLVSFNRGVLVCREWEGTALK--VNKDVRLALIRIGIVLGKDGGA-LAK-MIPLFMMFAGGPLGSGQQWFSWIHLD  267 (363)
Q Consensus       192 ~~~~~~~~y~~~k~~~~~~~~~~~~--~~~~~~~~ilRp~~v~g~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~i~v~  267 (363)
                      .+          |.....+......  ...|++++++|||.+.++.... ... ..........   ......+.+++++
T Consensus       161 ~s----------K~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~  227 (274)
T PRK07775        161 AA----------KAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAK---WGQARHDYFLRAS  227 (274)
T ss_pred             HH----------HHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHH---hcccccccccCHH
Confidence            44          3333332222221  1238999999999886553211 111 1111111110   0112235689999


Q ss_pred             HHHHHHHHHhcCCCCCceEEee
Q 017977          268 DIVNLIYEALSNPSYRGVINGT  289 (363)
Q Consensus       268 D~a~a~~~~~~~~~~~g~~~i~  289 (363)
                      |+|++++.+++++....+||+.
T Consensus       228 dva~a~~~~~~~~~~~~~~~~~  249 (274)
T PRK07775        228 DLARAITFVAETPRGAHVVNME  249 (274)
T ss_pred             HHHHHHHHHhcCCCCCCeeEEe
Confidence            9999999999876534477776

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.81  E-value=1.7e-18  Score=151.24  Aligned_cols=232  Identities=15%  Similarity=0.058  Sum_probs=149.7

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCC--CCccccCcccccCcchHHhhcc-------CCCEEE
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG--KKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV  121 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~-------~~d~Vi  121 (363)
                      ++++||||+|+||+++++.|+++|++|++++|++.+.+.+...  ........+|+.|.+++..+++       ++|+||
T Consensus         3 k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi   82 (257)
T PRK07074          3 RTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVLV   82 (257)
T ss_pred             CEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            5899999999999999999999999999999987654332211  1112244689999888876665       479999


Q ss_pred             EccCCCCCCC---CChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhhhhh
Q 017977          122 NLAGTPIGTR---WSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYC  196 (363)
Q Consensus       122 ~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~  196 (363)
                      |+++......   ...+.....+++|+.++.++++++...  ..+.+++|++||..+ +.       ....+.|..+   
T Consensus        83 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~-~~-------~~~~~~y~~s---  151 (257)
T PRK07074         83 ANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNG-MA-------ALGHPAYSAA---  151 (257)
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhh-cC-------CCCCcccHHH---
Confidence            9998643221   233444556789999998888888431  145567999998732 11       1112244444   


Q ss_pred             cccchhhHHHHHHHHHHHhcc--CCCceEEEEeeceEEeCCCCcc-cchHHHHHHHhCCCCCCCCCccccccHHHHHHHH
Q 017977          197 LVSFNRGVLVCREWEGTALKV--NKDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLI  273 (363)
Q Consensus       197 ~~~y~~~k~~~~~~~~~~~~~--~~~~~~~ilRp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~  273 (363)
                             |.....+.......  ..++++++++|+.++++..... ............     ....+++++++|+++++
T Consensus       152 -------K~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~d~a~~~  219 (257)
T PRK07074        152 -------KAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEELKK-----WYPLQDFATPDDVANAV  219 (257)
T ss_pred             -------HHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHHHHh-----cCCCCCCCCHHHHHHHH
Confidence                   32222222221111  1389999999999988743211 111111111111     11235789999999999


Q ss_pred             HHHhcCCC--CCc-eEEeeCCCCcCHHHHHHHHHH
Q 017977          274 YEALSNPS--YRG-VINGTAPNPVRLAEMCDHLGN  305 (363)
Q Consensus       274 ~~~~~~~~--~~g-~~~i~~~~~~s~~el~~~i~~  305 (363)
                      +.++....  ..| .+++.++...+.+|+.+.+.+
T Consensus       220 ~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~  254 (257)
T PRK07074        220 LFLASPAARAITGVCLPVDGGLTAGNREMARTLTL  254 (257)
T ss_pred             HHHcCchhcCcCCcEEEeCCCcCcCChhhhhhhcc
Confidence            99996532  335 777888888889999987754

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.80  E-value=1.4e-18  Score=153.00  Aligned_cols=238  Identities=10%  Similarity=0.013  Sum_probs=147.2

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccC----CCCCccccCcccccCcchHHhhcc-------CC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (363)
                      .+++++||||+|+||+++++.|+++|++|++++|+....+...    ..........+|+.|.+++.++++       .+
T Consensus         5 ~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   84 (275)
T PRK05876          5 PGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHV   84 (275)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            4568999999999999999999999999999999875543221    111112234689999888876654       47


Q ss_pred             CEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCC-CCCeEEEeccceecCCcccccccCCCcchh
Q 017977          118 TAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLELVKPKYLMRAAHQEMITWLSDYC  191 (363)
Q Consensus       118 d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~-~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~  191 (363)
                      |+|||+||.....   ....+..+..+++|+.++.++++++...  ..+ ..++|++||..+..+       .+....|.
T Consensus        85 d~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~-------~~~~~~Y~  157 (275)
T PRK05876         85 DVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVP-------NAGLGAYG  157 (275)
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccC-------CCCCchHH
Confidence            9999999974332   2344556778999999999999887532  122 457999998843221       23334566


Q ss_pred             hhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCC---CCCCCCCccccccHHH
Q 017977          192 AKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGG---PLGSGQQWFSWIHLDD  268 (363)
Q Consensus       192 ~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~v~D  268 (363)
                      .+|.+...|.+       .....+. ..|+++++++|+.+.++.......... .......   ..+.....+++++++|
T Consensus       158 asK~a~~~~~~-------~l~~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d  228 (275)
T PRK05876        158 VAKYGVVGLAE-------TLAREVT-ADGIGVSVLCPMVVETNLVANSERIRG-AACAQSSTTGSPGPLPLQDDNLGVDD  228 (275)
T ss_pred             HHHHHHHHHHH-------HHHHHhh-hcCcEEEEEEeCccccccccchhhhcC-ccccccccccccccccccccCCCHHH
Confidence            55433222221       1111111 238999999999998764321111100 0000000   1122233457899999


Q ss_pred             HHHHHHHHhcCCCCCceEEeeCCCCcCHHHHHHHHHHHh
Q 017977          269 IVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVL  307 (363)
Q Consensus       269 ~a~a~~~~~~~~~~~g~~~i~~~~~~s~~el~~~i~~~~  307 (363)
                      +|++++.++.++.   .+.+.+  +....++.+...+..
T Consensus       229 va~~~~~ai~~~~---~~~~~~--~~~~~~~~~~~~~~~  262 (275)
T PRK05876        229 IAQLTADAILANR---LYVLPH--AASRASIRRRFERID  262 (275)
T ss_pred             HHHHHHHHHHcCC---eEEecC--hhhHHHHHHHHHHHH
Confidence            9999999997643   344442  344455544444443

>PRK06182 short chain dehydrogenase; Validated

Probab=99.80  E-value=1.8e-18  Score=152.44  Aligned_cols=220  Identities=15%  Similarity=0.041  Sum_probs=137.9

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc-------CCCEEEE
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVVN  122 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~Vi~  122 (363)
                      +++|+||||+|+||++++++|+++|++|++++|+.++........  .....+|+.|.+++.++++       ++|+|||
T Consensus         3 ~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~~~--~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~   80 (273)
T PRK06182          3 KKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLASLG--VHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVN   80 (273)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhCC--CeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence            468999999999999999999999999999999876554332211  2245689999988877765       6899999


Q ss_pred             ccCCCCCC---CCChhhHHHHHHHHHHHHHH----HHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhhhhh
Q 017977          123 LAGTPIGT---RWSSEIKKEIKESRIRVTSK----VVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVY  195 (363)
Q Consensus       123 ~a~~~~~~---~~~~~~~~~~~~~n~~~~~~----l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~  195 (363)
                      +||.....   ..+.+..+..+++|+.++..    ++..+++  .+.+++|++||.++..+       .+....|..+|.
T Consensus        81 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~--~~~g~iv~isS~~~~~~-------~~~~~~Y~~sKa  151 (273)
T PRK06182         81 NAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRA--QRSGRIINISSMGGKIY-------TPLGAWYHATKF  151 (273)
T ss_pred             CCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHh--cCCCEEEEEcchhhcCC-------CCCccHhHHHHH
Confidence            99974322   22445678889999998544    4455555  56678999999742111       122223544432


Q ss_pred             hcccchhhHHHHHHHHHHH-h-ccCCCceEEEEeeceEEeCCCCcccc----------hHHHHHHHhCCCCCCCCCcccc
Q 017977          196 CLVSFNRGVLVCREWEGTA-L-KVNKDVRLALIRIGIVLGKDGGALAK----------MIPLFMMFAGGPLGSGQQWFSW  263 (363)
Q Consensus       196 ~~~~y~~~k~~~~~~~~~~-~-~~~~~~~~~ilRp~~v~g~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~  263 (363)
                                ....+.... . ....|+++++++|+.+.++.......          ......... ..+........+
T Consensus       152 ----------a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  220 (273)
T PRK06182        152 ----------ALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVA-ASMRSTYGSGRL  220 (273)
T ss_pred             ----------HHHHHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHH-HHHHHhhccccC
Confidence                      222221111 1 12248999999999998774211000          000000000 000000112346


Q ss_pred             ccHHHHHHHHHHHhcCCCCCceEEeeCC
Q 017977          264 IHLDDIVNLIYEALSNPSYRGVINGTAP  291 (363)
Q Consensus       264 i~v~D~a~a~~~~~~~~~~~g~~~i~~~  291 (363)
                      .+++|+|++++.++........|+++.+
T Consensus       221 ~~~~~vA~~i~~~~~~~~~~~~~~~g~~  248 (273)
T PRK06182        221 SDPSVIADAISKAVTARRPKTRYAVGFG  248 (273)
T ss_pred             CCHHHHHHHHHHHHhCCCCCceeecCcc
Confidence            7999999999999986544456776554

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.80  E-value=1.2e-18  Score=152.34  Aligned_cols=223  Identities=13%  Similarity=0.032  Sum_probs=141.5

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCC-----C-CccccCcccccCcchHHhhcc-------CC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----K-KTRFFPGVMIAEEPQWRDCIQ-------GS  117 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~-~~~~~~~~d~~~~~~~~~~~~-------~~  117 (363)
                      ++|+||||+|+||+++++.|+++|++|++++|+..........     . .......+|+.+.+++..+++       .+
T Consensus         3 k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~i   82 (259)
T PRK12384          3 QVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGRV   82 (259)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            5899999999999999999999999999999987543322110     0 112245679988887766553       57


Q ss_pred             CEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCC-CCCeEEEeccceecCCcccccccCCCcchh
Q 017977          118 TAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLELVKPKYLMRAAHQEMITWLSDYC  191 (363)
Q Consensus       118 d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~-~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~  191 (363)
                      |+|||+||.....   ....+..+..+++|+.++.++++++.+.  ..+ ..++|++||..+.++       .+....|.
T Consensus        83 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~-------~~~~~~Y~  155 (259)
T PRK12384         83 DLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVG-------SKHNSGYS  155 (259)
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccC-------CCCCchhH
Confidence            9999999865432   2344556778899999988777777653  134 357999988755444       22233455


Q ss_pred             hhhhhcccchhhHHHHHHHHHHHhc--cCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCC-------CCCCCCccc
Q 017977          192 AKVYCLVSFNRGVLVCREWEGTALK--VNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGP-------LGSGQQWFS  262 (363)
Q Consensus       192 ~~~~~~~~y~~~k~~~~~~~~~~~~--~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~  262 (363)
                      .+|          .....+......  ...|+++.++||+.++++....  .+++.+....+.+       ...+.....
T Consensus       156 ~sK----------aa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (259)
T PRK12384        156 AAK----------FGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQ--SLLPQYAKKLGIKPDEVEQYYIDKVPLKR  223 (259)
T ss_pred             HHH----------HHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhh--hhhHHHHHhcCCChHHHHHHHHHhCcccC
Confidence            543          222111111111  1248999999999988764321  2222221111100       011223346


Q ss_pred             cccHHHHHHHHHHHhcCCC--CCc-eEEeeCCC
Q 017977          263 WIHLDDIVNLIYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       263 ~i~v~D~a~a~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      +++++|++++++.++.+..  ..| +|++.+++
T Consensus       224 ~~~~~dv~~~~~~l~~~~~~~~~G~~~~v~~g~  256 (259)
T PRK12384        224 GCDYQDVLNMLLFYASPKASYCTGQSINVTGGQ  256 (259)
T ss_pred             CCCHHHHHHHHHHHcCcccccccCceEEEcCCE
Confidence            8999999999998887543  234 78988875

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.80  E-value=1.5e-18  Score=152.17  Aligned_cols=225  Identities=16%  Similarity=0.046  Sum_probs=139.6

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCC--ccccCcccccCcchHHhhcc-------CCC
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKK--TRFFPGVMIAEEPQWRDCIQ-------GST  118 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~-------~~d  118 (363)
                      .+.+++|||||+|+||++++++|+++|++|++++|+.+..+.+.....  ......+|+.|.+++.++++       ++|
T Consensus         9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   88 (264)
T PRK12829          9 LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGLD   88 (264)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence            344799999999999999999999999999999998765433221110  11245679998887776654       689


Q ss_pred             EEEEccCCCCC----CCCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCC-CCeEEEeccceecCCcccccccCCCcchh
Q 017977          119 AVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGV-RPSVLELVKPKYLMRAAHQEMITWLSDYC  191 (363)
Q Consensus       119 ~Vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~-~~~v~~SS~~~~yg~~~~~e~~~~~~~~~  191 (363)
                      +|||+++....    .....+.....++.|+.++.++++++.+.  ..+. +.++++||.++.++       .+....|.
T Consensus        89 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~-------~~~~~~y~  161 (264)
T PRK12829         89 VLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLG-------YPGRTPYA  161 (264)
T ss_pred             EEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccC-------CCCCchhH
Confidence            99999997412    23345567888999999999988887432  1333 45777777644333       12223454


Q ss_pred             hhhhhcccchhhHHHHHHHHHHHhc--cCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCC-------CCCCCccc
Q 017977          192 AKVYCLVSFNRGVLVCREWEGTALK--VNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPL-------GSGQQWFS  262 (363)
Q Consensus       192 ~~~~~~~~y~~~k~~~~~~~~~~~~--~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~  262 (363)
                      ..|.          ....+......  ...+++++++||++++++.....   ........+...       ........
T Consensus       162 ~~K~----------a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (264)
T PRK12829        162 ASKW----------AVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRV---IEARAQQLGIGLDEMEQEYLEKISLGR  228 (264)
T ss_pred             HHHH----------HHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHH---hhhhhhccCCChhHHHHHHHhcCCCCC
Confidence            4432          22222111111  12389999999999998853211   110000000000       00011234


Q ss_pred             cccHHHHHHHHHHHhcCCC--CCc-eEEeeCCC
Q 017977          263 WIHLDDIVNLIYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       263 ~i~v~D~a~a~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      +++++|+|+++..++....  ..| .|++.++.
T Consensus       229 ~~~~~d~a~~~~~l~~~~~~~~~g~~~~i~~g~  261 (264)
T PRK12829        229 MVEPEDIAATALFLASPAARYITGQAISVDGNV  261 (264)
T ss_pred             CCCHHHHHHHHHHHcCccccCccCcEEEeCCCc
Confidence            8999999999988876422  234 88888864

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.80  E-value=4.5e-20  Score=158.68  Aligned_cols=215  Identities=20%  Similarity=0.204  Sum_probs=139.4

Q ss_pred             EEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcc--cccCCCCCccccCcccccCcchHHhhccCCCEEEEccCCCCCC
Q 017977           53 VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA--ELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGT  130 (363)
Q Consensus        53 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~~~~~  130 (363)
                      |+|+||||.+|+++++.|++.+++|++++|++.+.  ..+...+ . ....+|+.|.+++.++++++|+||.+.+.... 
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g-~-~vv~~d~~~~~~l~~al~g~d~v~~~~~~~~~-   77 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQALG-A-EVVEADYDDPESLVAALKGVDAVFSVTPPSHP-   77 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHTT-T-EEEES-TT-HHHHHHHHTTCSEEEEESSCSCC-
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhccc-c-eEeecccCCHHHHHHHHcCCceEEeecCcchh-
Confidence            79999999999999999999999999999998542  2222111 1 13468999999999999999999988875321 


Q ss_pred             CCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCC--cchhhhhhhcccchhhHHHHH
Q 017977          131 RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWL--SDYCAKVYCLVSFNRGVLVCR  208 (363)
Q Consensus       131 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~--~~~~~~~~~~~~y~~~k~~~~  208 (363)
                                  .......++++++++  .++++||+ ||.+..+     .+.....  ......             +.
T Consensus        78 ------------~~~~~~~~li~Aa~~--agVk~~v~-ss~~~~~-----~~~~~~~p~~~~~~~-------------k~  124 (233)
T PF05368_consen   78 ------------SELEQQKNLIDAAKA--AGVKHFVP-SSFGADY-----DESSGSEPEIPHFDQ-------------KA  124 (233)
T ss_dssp             ------------CHHHHHHHHHHHHHH--HT-SEEEE-SEESSGT-----TTTTTSTTHHHHHHH-------------HH
T ss_pred             ------------hhhhhhhhHHHhhhc--cccceEEE-EEecccc-----cccccccccchhhhh-------------hh
Confidence                        124455699999999  89998885 5442322     1111111  111111             12


Q ss_pred             HHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCC----CC-CCCCCcccc-ccHHHHHHHHHHHhcCCCC
Q 017977          209 EWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGG----PL-GSGQQWFSW-IHLDDIVNLIYEALSNPSY  282 (363)
Q Consensus       209 ~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~-i~v~D~a~a~~~~~~~~~~  282 (363)
                      ..+....  ..+++++++||+.++......   +.+ .......    .+ ++++....+ ++.+|+++++..++.++..
T Consensus       125 ~ie~~l~--~~~i~~t~i~~g~f~e~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~  198 (233)
T PF05368_consen  125 EIEEYLR--ESGIPYTIIRPGFFMENLLPP---FAP-VVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEK  198 (233)
T ss_dssp             HHHHHHH--HCTSEBEEEEE-EEHHHHHTT---THH-TTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGG
T ss_pred             hhhhhhh--hccccceeccccchhhhhhhh---hcc-cccccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHH
Confidence            2222222  238999999999877532110   000 0011111    11 455555566 4999999999999998763


Q ss_pred             --Cc-eEEeeCCCCcCHHHHHHHHHHHhCCC
Q 017977          283 --RG-VINGTAPNPVRLAEMCDHLGNVLGRP  310 (363)
Q Consensus       283 --~g-~~~i~~~~~~s~~el~~~i~~~~g~~  310 (363)
                        .+ .+.+++ +.+|..|+++.+.+.+|++
T Consensus       199 ~~~~~~~~~~~-~~~t~~eia~~~s~~~G~~  228 (233)
T PF05368_consen  199 HNNGKTIFLAG-ETLTYNEIAAILSKVLGKK  228 (233)
T ss_dssp             TTEEEEEEEGG-GEEEHHHHHHHHHHHHTSE
T ss_pred             hcCCEEEEeCC-CCCCHHHHHHHHHHHHCCc
Confidence              34 555555 7799999999999999986

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.79  E-value=6.2e-18  Score=147.58  Aligned_cols=221  Identities=14%  Similarity=0.131  Sum_probs=139.1

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcc-cc----cCCCCCccccCcccccCcchHHhhcc-------CCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-EL----IFPGKKTRFFPGVMIAEEPQWRDCIQ-------GST  118 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~----~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d  118 (363)
                      ++|+||||+|+||+++++.|+++|++|++++|+..+. ..    +........+..+|+.+.+++.++++       .+|
T Consensus         3 k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   82 (256)
T PRK12745          3 PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRID   82 (256)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence            5799999999999999999999999999999875431 11    11111112245689999887766554       579


Q ss_pred             EEEEccCCCCCC-----CCChhhHHHHHHHHHHHHHHHHHHHHhC---CCC-----CCCeEEEeccceecCCcccccccC
Q 017977          119 AVVNLAGTPIGT-----RWSSEIKKEIKESRIRVTSKVVDLINES---PEG-----VRPSVLELVKPKYLMRAAHQEMIT  185 (363)
Q Consensus       119 ~Vi~~a~~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~-----~~~~v~~SS~~~~yg~~~~~e~~~  185 (363)
                      +|||+||.....     ....+..+..+++|+.++.++++++.+.   ..+     ..++|++||..+.++       .+
T Consensus        83 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-------~~  155 (256)
T PRK12745         83 CLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMV-------SP  155 (256)
T ss_pred             EEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccC-------CC
Confidence            999999864221     1234567788999999999998887652   011     456999999854443       12


Q ss_pred             CCcchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc-cchHHHHHHHhCCCCCCCCCccccc
Q 017977          186 WLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAGGPLGSGQQWFSWI  264 (363)
Q Consensus       186 ~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i  264 (363)
                      ....|..+|.....|.      ..+..+.  ...|+++++++|+.+.++..... ..+...+.  .+.     .....+.
T Consensus       156 ~~~~Y~~sK~a~~~~~------~~l~~~~--~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~--~~~-----~~~~~~~  220 (256)
T PRK12745        156 NRGEYCISKAGLSMAA------QLFAARL--AEEGIGVYEVRPGLIKTDMTAPVTAKYDALIA--KGL-----VPMPRWG  220 (256)
T ss_pred             CCcccHHHHHHHHHHH------HHHHHHH--HHhCCEEEEEecCCCcCccccccchhHHhhhh--hcC-----CCcCCCc
Confidence            2335555432211111      1111111  12489999999999988753221 11111111  110     1122477


Q ss_pred             cHHHHHHHHHHHhcCCC--CCc-eEEeeCCCC
Q 017977          265 HLDDIVNLIYEALSNPS--YRG-VINGTAPNP  293 (363)
Q Consensus       265 ~v~D~a~a~~~~~~~~~--~~g-~~~i~~~~~  293 (363)
                      +++|+++++..++....  ..| .|++.++..
T Consensus       221 ~~~d~a~~i~~l~~~~~~~~~G~~~~i~gg~~  252 (256)
T PRK12745        221 EPEDVARAVAALASGDLPYSTGQAIHVDGGLS  252 (256)
T ss_pred             CHHHHHHHHHHHhCCcccccCCCEEEECCCee
Confidence            99999999998886543  234 888887643

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.79  E-value=7e-18  Score=146.69  Aligned_cols=219  Identities=16%  Similarity=0.119  Sum_probs=142.3

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccC----CCCCccccCcccccCcchHHhhcc-------CC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (363)
                      .+++++||||+|+||++++++|+++|++|++++|+........    ..........+|+.+.+++..+++       .+
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   84 (250)
T PRK07774          5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGI   84 (250)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            3468999999999999999999999999999999875432221    111111234679998887766554       58


Q ss_pred             CEEEEccCCCCC------CCCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcc
Q 017977          118 TAVVNLAGTPIG------TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSD  189 (363)
Q Consensus       118 d~Vi~~a~~~~~------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~  189 (363)
                      |+|||+||....      ...+.+..+..+++|+.++.++++++.+.  ..+.+++|++||. ..|+         +.+.
T Consensus        85 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~-~~~~---------~~~~  154 (250)
T PRK07774         85 DYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSST-AAWL---------YSNF  154 (250)
T ss_pred             CEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecc-cccC---------Cccc
Confidence            999999996421      12234556778999999999999988863  1345679999998 4332         2234


Q ss_pred             hhhhhhhcccchhhHHHHHHHHHHHhcc--CCCceEEEEeeceEEeCCCCcccchHHHH-HHHhCCCCCCCCCccccccH
Q 017977          190 YCAKVYCLVSFNRGVLVCREWEGTALKV--NKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHL  266 (363)
Q Consensus       190 ~~~~~~~~~~y~~~k~~~~~~~~~~~~~--~~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v  266 (363)
                      |..+          |.............  ..++.+++++|+.+..+....... .... ....+.+..      -+.++
T Consensus       155 Y~~s----------K~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~-~~~~~~~~~~~~~~------~~~~~  217 (250)
T PRK07774        155 YGLA----------KVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVTP-KEFVADMVKGIPLS------RMGTP  217 (250)
T ss_pred             cHHH----------HHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccCC-HHHHHHHHhcCCCC------CCcCH
Confidence            4444          33333322222111  238999999999988775422111 0111 122222221      25679


Q ss_pred             HHHHHHHHHHhcCCC---CCceEEeeCCCCc
Q 017977          267 DDIVNLIYEALSNPS---YRGVINGTAPNPV  294 (363)
Q Consensus       267 ~D~a~a~~~~~~~~~---~~g~~~i~~~~~~  294 (363)
                      +|+|++++.++....   .+.+|++.+++.+
T Consensus       218 ~d~a~~~~~~~~~~~~~~~g~~~~v~~g~~~  248 (250)
T PRK07774        218 EDLVGMCLFLLSDEASWITGQIFNVDGGQII  248 (250)
T ss_pred             HHHHHHHHHHhChhhhCcCCCEEEECCCeec
Confidence            999999999987643   3348999987654

>PRK06128 oxidoreductase; Provisional

Probab=99.79  E-value=8.9e-18  Score=149.90  Aligned_cols=225  Identities=14%  Similarity=0.076  Sum_probs=142.3

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcc--cc----cCCCCCccccCcccccCcchHHhhcc-------
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA--EL----IFPGKKTRFFPGVMIAEEPQWRDCIQ-------  115 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~----~~~~~~~~~~~~~d~~~~~~~~~~~~-------  115 (363)
                      .+++||||||+|+||+++++.|+++|++|+++.++....  ..    +...........+|+.+.+++.++++       
T Consensus        54 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  133 (300)
T PRK06128         54 QGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELG  133 (300)
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhC
Confidence            347899999999999999999999999999887754321  11    11111112244579998887776654       


Q ss_pred             CCCEEEEccCCCCC----CCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchh
Q 017977          116 GSTAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYC  191 (363)
Q Consensus       116 ~~d~Vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~  191 (363)
                      ++|+|||+||....    ...+.+..+..+++|+.++.++++++.+......++|++||. ..|..      .+....|.
T Consensus       134 ~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~-~~~~~------~~~~~~Y~  206 (300)
T PRK06128        134 GLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSI-QSYQP------SPTLLDYA  206 (300)
T ss_pred             CCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCc-cccCC------CCCchhHH
Confidence            68999999996322    123556788899999999999999998641123579999998 43320      12223455


Q ss_pred             hhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHH-hCCCCCCCCCccccccHHHHH
Q 017977          192 AKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMF-AGGPLGSGQQWFSWIHLDDIV  270 (363)
Q Consensus       192 ~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v~D~a  270 (363)
                      .+|.+...|.++      +.. .+ ...|+++++++||.+.++............... ...++      ..+...+|+|
T Consensus       207 asK~a~~~~~~~------la~-el-~~~gI~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~~p~------~r~~~p~dva  272 (300)
T PRK06128        207 STKAAIVAFTKA------LAK-QV-AEKGIRVNAVAPGPVWTPLQPSGGQPPEKIPDFGSETPM------KRPGQPVEMA  272 (300)
T ss_pred             HHHHHHHHHHHH------HHH-Hh-hhcCcEEEEEEECcCcCCCcccCCCCHHHHHHHhcCCCC------CCCcCHHHHH
Confidence            554332222211      011 11 123899999999999988532111011111111 12222      2367899999


Q ss_pred             HHHHHHhcCCC--CCc-eEEeeCCCCc
Q 017977          271 NLIYEALSNPS--YRG-VINGTAPNPV  294 (363)
Q Consensus       271 ~a~~~~~~~~~--~~g-~~~i~~~~~~  294 (363)
                      .+++.++....  ..| .+++.++..+
T Consensus       273 ~~~~~l~s~~~~~~~G~~~~v~gg~~~  299 (300)
T PRK06128        273 PLYVLLASQESSYVTGEVFGVTGGLLL  299 (300)
T ss_pred             HHHHHHhCccccCccCcEEeeCCCEeC
Confidence            99999887544  234 8888887543

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.79  E-value=3.2e-18  Score=146.57  Aligned_cols=209  Identities=12%  Similarity=0.078  Sum_probs=132.3

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc---CCCEEEEccCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ---GSTAVVNLAGT  126 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~~d~Vi~~a~~  126 (363)
                      ||+++||||+|++|+++++.|+++ ++|++++|+..+...+...........+|+.|.+++.++++   ++|+|||+++.
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~   81 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHNAGV   81 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEECCCc
Confidence            468999999999999999999999 99999999876543322111112255689999998888776   58999999997


Q ss_pred             CCCC---CCChhhHHHHHHHHHHHHH----HHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhccc
Q 017977          127 PIGT---RWSSEIKKEIKESRIRVTS----KVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVS  199 (363)
Q Consensus       127 ~~~~---~~~~~~~~~~~~~n~~~~~----~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~~  199 (363)
                      ....   ....+.....++.|+.+..    ++++++.+   ..+++|++||..+..+       .+....|...      
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~~~v~~ss~~~~~~-------~~~~~~y~~~------  145 (227)
T PRK08219         82 ADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRA---AHGHVVFINSGAGLRA-------NPGWGSYAAS------  145 (227)
T ss_pred             CCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh---CCCeEEEEcchHhcCc-------CCCCchHHHH------
Confidence            4321   2233455667889998854    44444444   3467999998843222       1222344443      


Q ss_pred             chhhHHHHHHHHHHHhccCCC-ceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHHHHHhc
Q 017977          200 FNRGVLVCREWEGTALKVNKD-VRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALS  278 (363)
Q Consensus       200 y~~~k~~~~~~~~~~~~~~~~-~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~  278 (363)
                          |...............+ +++..++|+.+.++....       +....+..    .....+++++|+|++++.+++
T Consensus       146 ----K~a~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~-------~~~~~~~~----~~~~~~~~~~dva~~~~~~l~  210 (227)
T PRK08219        146 ----KFALRALADALREEEPGNVRVTSVHPGRTDTDMQRG-------LVAQEGGE----YDPERYLRPETVAKAVRFAVD  210 (227)
T ss_pred             ----HHHHHHHHHHHHHHhcCCceEEEEecCCccchHhhh-------hhhhhccc----cCCCCCCCHHHHHHHHHHHHc
Confidence                32222222222222124 899999998766542111       10011111    112457999999999999998


Q ss_pred             CCCCCceEEeeC
Q 017977          279 NPSYRGVINGTA  290 (363)
Q Consensus       279 ~~~~~g~~~i~~  290 (363)
                      ++....++++.-
T Consensus       211 ~~~~~~~~~~~~  222 (227)
T PRK08219        211 APPDAHITEVVV  222 (227)
T ss_pred             CCCCCccceEEE
Confidence            766445777654

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.79  E-value=1.2e-18  Score=151.33  Aligned_cols=223  Identities=13%  Similarity=0.049  Sum_probs=138.5

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCc-ccc----cCCCCCccccCcccccCcchHHhhcc-------CC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK-AEL----IFPGKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~----~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (363)
                      .++++||||+|+||++++++|+++|++|++++|+..+ .+.    +...........+|+.+.+++..+++       ++
T Consensus         6 ~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   85 (248)
T PRK07806          6 GKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGGL   85 (248)
T ss_pred             CcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            4689999999999999999999999999999997643 111    11111111244579999888876654       58


Q ss_pred             CEEEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhc
Q 017977          118 TAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCL  197 (363)
Q Consensus       118 d~Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~  197 (363)
                      |+|||+|+....   ....+...+++|+.++.++++++.+......++|++||....+..  ..+..+....        
T Consensus        86 d~vi~~ag~~~~---~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~--~~~~~~~~~~--------  152 (248)
T PRK07806         86 DALVLNASGGME---SGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIP--TVKTMPEYEP--------  152 (248)
T ss_pred             cEEEECCCCCCC---CCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCc--cccCCccccH--------
Confidence            999999986322   122345678899999999999998741123479999986332210  0111111123        


Q ss_pred             ccchhhHHHHHHHHHHHhcc--CCCceEEEEeeceEEeCCCCcc-cchHHHHHHHhCCCCCCCCCccccccHHHHHHHHH
Q 017977          198 VSFNRGVLVCREWEGTALKV--NKDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY  274 (363)
Q Consensus       198 ~~y~~~k~~~~~~~~~~~~~--~~~~~~~ilRp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~  274 (363)
                        |..+|...+.........  ..++++++++|+.+-++..... ....+..  .....    .....+++++|+|++++
T Consensus       153 --Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~--~~~~~----~~~~~~~~~~dva~~~~  224 (248)
T PRK07806        153 --VARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTATLLNRLNPGA--IEARR----EAAGKLYTVSEFAAEVA  224 (248)
T ss_pred             --HHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhhhhccCCHHH--HHHHH----hhhcccCCHHHHHHHHH
Confidence              444454444333322211  2389999999987766521100 0000000  00000    01135899999999999


Q ss_pred             HHhcCCCCCc-eEEeeCCCC
Q 017977          275 EALSNPSYRG-VINGTAPNP  293 (363)
Q Consensus       275 ~~~~~~~~~g-~~~i~~~~~  293 (363)
                      .+++.....| +|++++++.
T Consensus       225 ~l~~~~~~~g~~~~i~~~~~  244 (248)
T PRK07806        225 RAVTAPVPSGHIEYVGGADY  244 (248)
T ss_pred             HHhhccccCccEEEecCccc
Confidence            9998665555 899998763

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.79  E-value=5.3e-18  Score=147.21  Aligned_cols=220  Identities=12%  Similarity=0.027  Sum_probs=140.7

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCC-Cccccc----CCCCCccccCcccccCcchHHhhccC-------C
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR-SKAELI----FPGKKTRFFPGVMIAEEPQWRDCIQG-------S  117 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~~-------~  117 (363)
                      +++++||||+|+||++++++|+++|++|+++.++. ...+..    ........+..+|+.+.+++.++++.       +
T Consensus         6 ~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   85 (247)
T PRK12935          6 GKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGKV   85 (247)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            46899999999999999999999999998776543 222211    11111123456899998888777654       7


Q ss_pred             CEEEEccCCCCCCC---CChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhh
Q 017977          118 TAVVNLAGTPIGTR---WSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCA  192 (363)
Q Consensus       118 d~Vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~  192 (363)
                      |+|||+|+......   ...+..++.+++|+.++.++++++...  ..+..++|++||..+.++       .+....|..
T Consensus        86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-------~~~~~~Y~~  158 (247)
T PRK12935         86 DILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAG-------GFGQTNYSA  158 (247)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCC-------CCCCcchHH
Confidence            99999999743322   233567888999999999999988742  123457999998744333       123345555


Q ss_pred             hhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCccc-chHHHHHHHhCCCCCCCCCccccccHHHHHH
Q 017977          193 KVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALA-KMIPLFMMFAGGPLGSGQQWFSWIHLDDIVN  271 (363)
Q Consensus       193 ~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  271 (363)
                      +|.+...+.+      .+.. .+. ..++++++++|+.+.++...... ....  .....      ...+.+.+++|+++
T Consensus       159 sK~a~~~~~~------~l~~-~~~-~~~i~v~~v~pg~v~t~~~~~~~~~~~~--~~~~~------~~~~~~~~~edva~  222 (247)
T PRK12935        159 AKAGMLGFTK------SLAL-ELA-KTNVTVNAICPGFIDTEMVAEVPEEVRQ--KIVAK------IPKKRFGQADEIAK  222 (247)
T ss_pred             HHHHHHHHHH------HHHH-HHH-HcCcEEEEEEeCCCcChhhhhccHHHHH--HHHHh------CCCCCCcCHHHHHH
Confidence            5433222211      1111 111 23899999999999765321111 1111  11111      12346899999999


Q ss_pred             HHHHHhcCCC--CCceEEeeCCC
Q 017977          272 LIYEALSNPS--YRGVINGTAPN  292 (363)
Q Consensus       272 a~~~~~~~~~--~~g~~~i~~~~  292 (363)
                      +++.+++...  .+..|++.++.
T Consensus       223 ~~~~~~~~~~~~~g~~~~i~~g~  245 (247)
T PRK12935        223 GVVYLCRDGAYITGQQLNINGGL  245 (247)
T ss_pred             HHHHHcCcccCccCCEEEeCCCc
Confidence            9999886543  34489988863

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.79  E-value=5.7e-18  Score=147.61  Aligned_cols=222  Identities=16%  Similarity=0.075  Sum_probs=137.2

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEE-eCCCCccccc----CCCCCccccCcccccCcchHHhhcc---------
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVL-TRSRSKAELI----FPGKKTRFFPGVMIAEEPQWRDCIQ---------  115 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~---------  115 (363)
                      .++|+||||+|+||++++++|+++|++|.++ .|+..+....    ...........+|+.|.+++.++++         
T Consensus         6 ~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~~   85 (254)
T PRK12746          6 GKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQIR   85 (254)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhccc
Confidence            3689999999999999999999999999875 5655432211    1111112245679999888876655         


Q ss_pred             ----CCCEEEEccCCCCCCC---CChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCc
Q 017977          116 ----GSTAVVNLAGTPIGTR---WSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLS  188 (363)
Q Consensus       116 ----~~d~Vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~  188 (363)
                          ++|+|||+||......   ...+..+..+++|+.++.++++++.+......++|++||. ..+.      ..+...
T Consensus        86 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~-~~~~------~~~~~~  158 (254)
T PRK12746         86 VGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSA-EVRL------GFTGSI  158 (254)
T ss_pred             cCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCH-HhcC------CCCCCc
Confidence                4899999999743322   2334456778899999999999988631223579999988 3332      112233


Q ss_pred             chhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHH
Q 017977          189 DYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDD  268 (363)
Q Consensus       189 ~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  268 (363)
                      .|..+|.+...+.++      ...+ . ...++++++++|+.+.++-......-..........     .....+++++|
T Consensus       159 ~Y~~sK~a~~~~~~~------~~~~-~-~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~d  225 (254)
T PRK12746        159 AYGLSKGALNTMTLP------LAKH-L-GERGITVNTIMPGYTKTDINAKLLDDPEIRNFATNS-----SVFGRIGQVED  225 (254)
T ss_pred             chHhhHHHHHHHHHH------HHHH-H-hhcCcEEEEEEECCccCcchhhhccChhHHHHHHhc-----CCcCCCCCHHH
Confidence            455443322222111      1111 1 124899999999999887432110000001111111     11124678999


Q ss_pred             HHHHHHHHhcCCC---CCceEEeeCC
Q 017977          269 IVNLIYEALSNPS---YRGVINGTAP  291 (363)
Q Consensus       269 ~a~a~~~~~~~~~---~~g~~~i~~~  291 (363)
                      +|+++..++..+.   .+.+|++.++
T Consensus       226 va~~~~~l~~~~~~~~~g~~~~i~~~  251 (254)
T PRK12746        226 IADAVAFLASSDSRWVTGQIIDVSGG  251 (254)
T ss_pred             HHHHHHHHcCcccCCcCCCEEEeCCC
Confidence            9999998887643   2348888775

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.78  E-value=1.4e-17  Score=145.68  Aligned_cols=219  Identities=14%  Similarity=0.045  Sum_probs=134.7

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCccc---ccCCCCCccccCcccccCcchHHhhcc-------CCC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE---LIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GST  118 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d  118 (363)
                      .+++++||||+|+||++++++|+++|++|++++|+.....   .+...........+|+.+.+++.++++       ++|
T Consensus         7 ~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   86 (260)
T PRK12823          7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRID   86 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCCe
Confidence            3468999999999999999999999999999999753211   111111112244578988877766554       589


Q ss_pred             EEEEccCCCCC----CCCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhh
Q 017977          119 AVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCA  192 (363)
Q Consensus       119 ~Vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~  192 (363)
                      +|||+||....    .....+..+..+++|+.++..+++++.+.  ..+..++|++||. ..++        +....|..
T Consensus        87 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~-~~~~--------~~~~~Y~~  157 (260)
T PRK12823         87 VLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSI-ATRG--------INRVPYSA  157 (260)
T ss_pred             EEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCc-cccC--------CCCCccHH
Confidence            99999985321    22345556777889998877655555432  1455679999998 4333        11224554


Q ss_pred             hhhhcccchhhHHHHHHHHHHHhc--cCCCceEEEEeeceEEeCCCCc----------ccchHHHH-H-HHhCCCCCCCC
Q 017977          193 KVYCLVSFNRGVLVCREWEGTALK--VNKDVRLALIRIGIVLGKDGGA----------LAKMIPLF-M-MFAGGPLGSGQ  258 (363)
Q Consensus       193 ~~~~~~~y~~~k~~~~~~~~~~~~--~~~~~~~~ilRp~~v~g~~~~~----------~~~~~~~~-~-~~~~~~~~~~~  258 (363)
                      +          |.....+......  ...++++++++|+.++++....          ...+...+ . .....++    
T Consensus       158 s----------K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  223 (260)
T PRK12823        158 A----------KGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLM----  223 (260)
T ss_pred             H----------HHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCc----
Confidence            4          3222222221111  1238999999999999873110          01111111 1 1112222    


Q ss_pred             CccccccHHHHHHHHHHHhcCCC--CCc-eEEeeCCC
Q 017977          259 QWFSWIHLDDIVNLIYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       259 ~~~~~i~v~D~a~a~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                        .-+.+++|+|++++.++....  ..| .+++.+++
T Consensus       224 --~~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg~  258 (260)
T PRK12823        224 --KRYGTIDEQVAAILFLASDEASYITGTVLPVGGGD  258 (260)
T ss_pred             --ccCCCHHHHHHHHHHHcCcccccccCcEEeecCCC
Confidence              125679999999999886543  334 88887664

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.78  E-value=5.9e-18  Score=143.56  Aligned_cols=207  Identities=15%  Similarity=0.105  Sum_probs=142.3

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCC-----ccccCcccccCcchHHhhcc-------
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKK-----TRFFPGVMIAEEPQWRDCIQ-------  115 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~d~~~~~~~~~~~~-------  115 (363)
                      .++++++|||||+.||..+++.|.++|++|+.+.|+.++...+.....     ......+|+.+.+++..+.+       
T Consensus         4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~   83 (265)
T COG0300           4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGG   83 (265)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCC
Confidence            455799999999999999999999999999999999987665533221     12244688988888876653       


Q ss_pred             CCCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcch
Q 017977          116 GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDY  190 (363)
Q Consensus       116 ~~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~  190 (363)
                      .+|++|||||.....   ..+.+...+++++|+.+...+-.++...  ..+..++|.++|.++...       .|....|
T Consensus        84 ~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p-------~p~~avY  156 (265)
T COG0300          84 PIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIP-------TPYMAVY  156 (265)
T ss_pred             cccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCC-------CcchHHH
Confidence            589999999986553   3345667889999999977666655542  256678999999964221       3445567


Q ss_pred             hhhhhhcccchhhHHHHHHHHHHHhcc-CCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHH
Q 017977          191 CAKVYCLVSFNRGVLVCREWEGTALKV-NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDI  269 (363)
Q Consensus       191 ~~~~~~~~~y~~~k~~~~~~~~~~~~~-~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  269 (363)
                      .++|.....|.         +....+. ..|+.++.+.||.+..+-...           .+..........-++..+|+
T Consensus       157 ~ATKa~v~~fS---------eaL~~EL~~~gV~V~~v~PG~~~T~f~~~-----------~~~~~~~~~~~~~~~~~~~v  216 (265)
T COG0300         157 SATKAFVLSFS---------EALREELKGTGVKVTAVCPGPTRTEFFDA-----------KGSDVYLLSPGELVLSPEDV  216 (265)
T ss_pred             HHHHHHHHHHH---------HHHHHHhcCCCeEEEEEecCccccccccc-----------cccccccccchhhccCHHHH
Confidence            76654433333         2222222 238999999999987653211           00000001112347899999


Q ss_pred             HHHHHHHhcCCC
Q 017977          270 VNLIYEALSNPS  281 (363)
Q Consensus       270 a~a~~~~~~~~~  281 (363)
                      |+..+..+.+.+
T Consensus       217 a~~~~~~l~~~k  228 (265)
T COG0300         217 AEAALKALEKGK  228 (265)
T ss_pred             HHHHHHHHhcCC
Confidence            999999998754

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.78  E-value=2.5e-17  Score=144.97  Aligned_cols=220  Identities=11%  Similarity=0.077  Sum_probs=136.2

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc-------CCCEEEE
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVVN  122 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~Vi~  122 (363)
                      +++|+||||+|+||++++++|+++|++|++++|+.........    .....+|+.|.+++.++++       .+|+|||
T Consensus         4 ~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~----~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~   79 (270)
T PRK06179          4 SKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPIPG----VELLELDVTDDASVQAAVDEVIARAGRIDVLVN   79 (270)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccccCC----CeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence            4689999999999999999999999999999998755433211    1255689999998887775       4699999


Q ss_pred             ccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhc
Q 017977          123 LAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCL  197 (363)
Q Consensus       123 ~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~  197 (363)
                      +||.....   ....+..+.++++|+.++.++++++...  ..+.+++|++||..+..+       .+....|..+|...
T Consensus        80 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-------~~~~~~Y~~sK~a~  152 (270)
T PRK06179         80 NAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLP-------APYMALYAASKHAV  152 (270)
T ss_pred             CCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCC-------CCCccHHHHHHHHH
Confidence            99974332   2244566888999999998888885331  156778999999843221       22233455443222


Q ss_pred             ccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc---cchHHHHHHHhC-CCCCCCCCccccccHHHHHHHH
Q 017977          198 VSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL---AKMIPLFMMFAG-GPLGSGQQWFSWIHLDDIVNLI  273 (363)
Q Consensus       198 ~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~---~~~~~~~~~~~~-~~~~~~~~~~~~i~v~D~a~a~  273 (363)
                      ..|.+      ....+ . ...|+++++++|+.+.++.....   ......+..... ...............+|+|+++
T Consensus       153 ~~~~~------~l~~e-l-~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~  224 (270)
T PRK06179        153 EGYSE------SLDHE-V-RQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERAVVSKAVAKAVKKADAPEVVADTV  224 (270)
T ss_pred             HHHHH------HHHHH-H-hhhCcEEEEEeCCCcccccccccCCCCCcchhhHHHHHHHHHHHHhccccCCCHHHHHHHH
Confidence            21111      11111 1 12499999999999987632111   000000000000 0000000011246789999999


Q ss_pred             HHHhcCCCCCceEEe
Q 017977          274 YEALSNPSYRGVING  288 (363)
Q Consensus       274 ~~~~~~~~~~g~~~i  288 (363)
                      +.++..+.....|..
T Consensus       225 ~~~~~~~~~~~~~~~  239 (270)
T PRK06179        225 VKAALGPWPKMRYTA  239 (270)
T ss_pred             HHHHcCCCCCeeEec
Confidence            999987653335543

>PRK06194 hypothetical protein; Provisional

Probab=99.78  E-value=8e-18  Score=149.42  Aligned_cols=223  Identities=11%  Similarity=-0.037  Sum_probs=140.8

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccC----CCCCccccCcccccCcchHHhhcc-------CCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GST  118 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~~d  118 (363)
                      +++||||||+|+||++++++|+++|++|++++|+........    ..........+|+.|.+++.++++       ++|
T Consensus         6 ~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id   85 (287)
T PRK06194          6 GKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAVH   85 (287)
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            468999999999999999999999999999999765433221    111112235679999888887765       479


Q ss_pred             EEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCC------CCeEEEeccceecCCcccccccCCC
Q 017977          119 AVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGV------RPSVLELVKPKYLMRAAHQEMITWL  187 (363)
Q Consensus       119 ~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~------~~~v~~SS~~~~yg~~~~~e~~~~~  187 (363)
                      +|||+||.....   ..+.+..+..+++|+.++.++++++...  ..+.      .++|++||.++.++       .+..
T Consensus        86 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-------~~~~  158 (287)
T PRK06194         86 LLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLA-------PPAM  158 (287)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccC-------CCCC
Confidence            999999975432   2344566778999999999987774331  0222      47999999854333       1233


Q ss_pred             cchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCC---CCCCCCccccc
Q 017977          188 SDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGP---LGSGQQWFSWI  264 (363)
Q Consensus       188 ~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i  264 (363)
                      +.|..+|.+...|.+      .+..+......++.+..+.|+.+..+-...          ..+.+   .+++.+.++++
T Consensus       159 ~~Y~~sK~a~~~~~~------~l~~e~~~~~~~irv~~v~pg~i~t~~~~~----------~~~~~~~~~~~~~~~~~~~  222 (287)
T PRK06194        159 GIYNVSKHAVVSLTE------TLYQDLSLVTDQVGASVLCPYFVPTGIWQS----------ERNRPADLANTAPPTRSQL  222 (287)
T ss_pred             cchHHHHHHHHHHHH------HHHHHHhhcCCCeEEEEEEeCcccCccccc----------cccCchhcccCccccchhh
Confidence            456555432222221      111111111236788888887665442111          11111   14456677888


Q ss_pred             cHHHHHHHHHHHhcCCCCCceEEeeCCCCcCHHHHHHHHHHHhCCC
Q 017977          265 HLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRP  310 (363)
Q Consensus       265 ~v~D~a~a~~~~~~~~~~~g~~~i~~~~~~s~~el~~~i~~~~g~~  310 (363)
                      +++|.+.++....               .++..|+++.+.+.+...
T Consensus       223 ~~~~~~~~~~~~~---------------~~s~~dva~~i~~~~~~~  253 (287)
T PRK06194        223 IAQAMSQKAVGSG---------------KVTAEEVAQLVFDAIRAG  253 (287)
T ss_pred             HHHHHHHhhhhcc---------------CCCHHHHHHHHHHHHHcC
Confidence            8888887754221               168888888888877543

>PLN02253 xanthoxin dehydrogenase

Probab=99.78  E-value=1.1e-17  Score=148.09  Aligned_cols=224  Identities=12%  Similarity=0.011  Sum_probs=141.5

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCC---CCCccccCcccccCcchHHhhcc-------CCCE
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP---GKKTRFFPGVMIAEEPQWRDCIQ-------GSTA  119 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~-------~~d~  119 (363)
                      +++++||||+|+||++++++|+++|++|++++|+....+....   .........+|+.|.+++.++++       ++|+
T Consensus        18 ~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id~   97 (280)
T PLN02253         18 GKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLDI   97 (280)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCCCE
Confidence            4689999999999999999999999999999997654322211   11112245689999988877765       6899


Q ss_pred             EEEccCCCCC-----CCCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhh
Q 017977          120 VVNLAGTPIG-----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCA  192 (363)
Q Consensus       120 Vi~~a~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~  192 (363)
                      |||+||....     ...+.+..+..+++|+.++.++++++.+.  ..+..++|++||.++.++       .+....|..
T Consensus        98 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~-------~~~~~~Y~~  170 (280)
T PLN02253         98 MVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIG-------GLGPHAYTG  170 (280)
T ss_pred             EEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhccc-------CCCCcccHH
Confidence            9999986422     12345667889999999999998887642  123456899988755443       122224554


Q ss_pred             hhhhcccchhhHHHHHHHHHHHhcc--CCCceEEEEeeceEEeCCCCc----c---cchHHHHHH-Hh-CCCCCCCCCcc
Q 017977          193 KVYCLVSFNRGVLVCREWEGTALKV--NKDVRLALIRIGIVLGKDGGA----L---AKMIPLFMM-FA-GGPLGSGQQWF  261 (363)
Q Consensus       193 ~~~~~~~y~~~k~~~~~~~~~~~~~--~~~~~~~ilRp~~v~g~~~~~----~---~~~~~~~~~-~~-~~~~~~~~~~~  261 (363)
                      +          |.....+.......  ..++.+.+++|+.+.++....    .   ......+.. .. ..++     ..
T Consensus       171 s----------K~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-----~~  235 (280)
T PLN02253        171 S----------KHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANL-----KG  235 (280)
T ss_pred             H----------HHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCCCC-----cC
Confidence            4          32222222211111  238999999999998763211    0   011111110 01 1111     11


Q ss_pred             ccccHHHHHHHHHHHhcCCC--CCc-eEEeeCCCCcC
Q 017977          262 SWIHLDDIVNLIYEALSNPS--YRG-VINGTAPNPVR  295 (363)
Q Consensus       262 ~~i~v~D~a~a~~~~~~~~~--~~g-~~~i~~~~~~s  295 (363)
                      ..++++|+|+++..++....  ..| .+++.++...+
T Consensus       236 ~~~~~~dva~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
T PLN02253        236 VELTVDDVANAVLFLASDEARYISGLNLMIDGGFTCT  272 (280)
T ss_pred             CCCCHHHHHHHHHhhcCcccccccCcEEEECCchhhc
Confidence            24789999999999987543  334 77887765443

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.78  E-value=1.2e-17  Score=144.85  Aligned_cols=218  Identities=16%  Similarity=0.097  Sum_probs=140.1

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc---CCCEEEEccCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ---GSTAVVNLAGT  126 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~~d~Vi~~a~~  126 (363)
                      +++++||||+|+||+++++.|+++|++|++++|+.++...+..... .....+|+.+.+++.++++   ++|+|||+|+.
T Consensus         9 ~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~ag~   87 (245)
T PRK07060          9 GKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETG-CEPLRLDVGDDAAIRAALAAAGAFDGLVNCAGI   87 (245)
T ss_pred             CCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC-CeEEEecCCCHHHHHHHHHHhCCCCEEEECCCC
Confidence            4689999999999999999999999999999998765433322111 1134578888887777765   48999999987


Q ss_pred             CCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCC-CCCeEEEeccceecCCcccccccCCCcchhhhhhhcccc
Q 017977          127 PIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVSF  200 (363)
Q Consensus       127 ~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~-~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~~y  200 (363)
                      ....   ....+..+..+++|+.++.++++++.+.  ..+ .+++|++||.++.++       .+....|..+       
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~-------~~~~~~y~~s-------  153 (245)
T PRK07060         88 ASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVG-------LPDHLAYCAS-------  153 (245)
T ss_pred             CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCC-------CCCCcHhHHH-------
Confidence            4321   2234556777889999999999988763  122 357999998844333       1222345444       


Q ss_pred             hhhHHHHHHHHHHHhcc--CCCceEEEEeeceEEeCCCCc-ccchHHHHHHHhCCCCCCCCCccccccHHHHHHHHHHHh
Q 017977          201 NRGVLVCREWEGTALKV--NKDVRLALIRIGIVLGKDGGA-LAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEAL  277 (363)
Q Consensus       201 ~~~k~~~~~~~~~~~~~--~~~~~~~ilRp~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~  277 (363)
                         |.............  ..+++++.+||+.++++.... +.............      ....+++++|+|+++..++
T Consensus       154 ---K~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~d~a~~~~~l~  224 (245)
T PRK07060        154 ---KAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAAI------PLGRFAEVDDVAAPILFLL  224 (245)
T ss_pred             ---HHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCHHHHHHHHhcC------CCCCCCCHHHHHHHHHHHc
Confidence               32222222211111  238999999999999875321 11111111111111      1234899999999999999


Q ss_pred             cCCC--CCc-eEEeeCC
Q 017977          278 SNPS--YRG-VINGTAP  291 (363)
Q Consensus       278 ~~~~--~~g-~~~i~~~  291 (363)
                      ..+.  ..| .+++.++
T Consensus       225 ~~~~~~~~G~~~~~~~g  241 (245)
T PRK07060        225 SDAASMVSGVSLPVDGG  241 (245)
T ss_pred             CcccCCccCcEEeECCC
Confidence            7654  334 6666554

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.78  E-value=9.5e-18  Score=144.78  Aligned_cols=212  Identities=17%  Similarity=0.183  Sum_probs=137.2

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCC--CCccccCcccccCcchHHhhcc-------CCCE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG--KKTRFFPGVMIAEEPQWRDCIQ-------GSTA  119 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~-------~~d~  119 (363)
                      ++++||||||+|+||+++++.|+++|++|++++|++.+.......  ........+|+.|.+++.++++       ++|+
T Consensus         6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   85 (239)
T PRK12828          6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLDA   85 (239)
T ss_pred             CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcCE
Confidence            346899999999999999999999999999999987553221100  0011134578888887776654       5899


Q ss_pred             EEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhhh
Q 017977          120 VVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKV  194 (363)
Q Consensus       120 Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~  194 (363)
                      |||+++.....   ....+.....++.|+.++.++++++.+.  ..+.+++|++||. ..++.      .+....|...|
T Consensus        86 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~-~~~~~------~~~~~~y~~sk  158 (239)
T PRK12828         86 LVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAG-AALKA------GPGMGAYAAAK  158 (239)
T ss_pred             EEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECch-HhccC------CCCcchhHHHH
Confidence            99999864221   2234445677889999999998887532  1467789999998 43321      12223444443


Q ss_pred             hhcccchhhHHHHHHHHHHHh--ccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHH
Q 017977          195 YCLVSFNRGVLVCREWEGTAL--KVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL  272 (363)
Q Consensus       195 ~~~~~y~~~k~~~~~~~~~~~--~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a  272 (363)
                      .          ....+.....  ....++++.++||+.++++.....  .          +   ......+++++|+|++
T Consensus       159 ~----------a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~--~----------~---~~~~~~~~~~~dva~~  213 (239)
T PRK12828        159 A----------GVARLTEALAAELLDRGITVNAVLPSIIDTPPNRAD--M----------P---DADFSRWVTPEQIAAV  213 (239)
T ss_pred             H----------HHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhc--C----------C---chhhhcCCCHHHHHHH
Confidence            2          2111111111  112389999999999998732110  0          0   0111237999999999


Q ss_pred             HHHHhcCCC--CCc-eEEeeCCC
Q 017977          273 IYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       273 ~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      +..++.+..  ..| .+++.+++
T Consensus       214 ~~~~l~~~~~~~~g~~~~~~g~~  236 (239)
T PRK12828        214 IAFLLSDEAQAITGASIPVDGGV  236 (239)
T ss_pred             HHHHhCcccccccceEEEecCCE
Confidence            999997653  234 67776664

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.78  E-value=1.1e-17  Score=145.67  Aligned_cols=223  Identities=16%  Similarity=0.071  Sum_probs=137.3

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCc-ccc----cCCCCCccccCcccccCcchHHhhcc-------CC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK-AEL----IFPGKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~----~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (363)
                      +++|+||||+|+||++++++|+++|++|++..|+... ...    ............+|+.+.+++..+++       ++
T Consensus         6 ~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   85 (252)
T PRK06077          6 DKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYGVA   85 (252)
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcCCC
Confidence            4689999999999999999999999999887765422 111    11111111234578888887766554       67


Q ss_pred             CEEEEccCCCCCCC---CChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhhhh
Q 017977          118 TAVVNLAGTPIGTR---WSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKV  194 (363)
Q Consensus       118 d~Vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~  194 (363)
                      |+|||+||......   ...+..+..+++|+.+..++++++.+......++|++||. ..+.      ..++...|..+|
T Consensus        86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~-~~~~------~~~~~~~Y~~sK  158 (252)
T PRK06077         86 DILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASV-AGIR------PAYGLSIYGAMK  158 (252)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcch-hccC------CCCCchHHHHHH
Confidence            99999999643322   1233346788999999999999888631123579999988 3332      122334555553


Q ss_pred             hhcccchhhHHHHHHHHHHH-hccCCCceEEEEeeceEEeCCCCcccchHHH-HHHHhCCCCCCCCCccccccHHHHHHH
Q 017977          195 YCLVSFNRGVLVCREWEGTA-LKVNKDVRLALIRIGIVLGKDGGALAKMIPL-FMMFAGGPLGSGQQWFSWIHLDDIVNL  272 (363)
Q Consensus       195 ~~~~~y~~~k~~~~~~~~~~-~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~v~D~a~a  272 (363)
                      .+.          ....... .....++.+.+++|+.+.++.......+... ......    .......+++++|+|++
T Consensus       159 ~~~----------~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~dva~~  224 (252)
T PRK06077        159 AAV----------INLTKYLALELAPKIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAE----KFTLMGKILDPEEVAEF  224 (252)
T ss_pred             HHH----------HHHHHHHHHHHhcCCEEEEEeeCCccChHHHhhhhcccccHHHHHH----hcCcCCCCCCHHHHHHH
Confidence            222          2211111 1111279999999999987643211111000 000000    00112358999999999


Q ss_pred             HHHHhcCCCC-CceEEeeCCCC
Q 017977          273 IYEALSNPSY-RGVINGTAPNP  293 (363)
Q Consensus       273 ~~~~~~~~~~-~g~~~i~~~~~  293 (363)
                      ++.++..... +++|++.++..
T Consensus       225 ~~~~~~~~~~~g~~~~i~~g~~  246 (252)
T PRK06077        225 VAAILKIESITGQVFVLDSGES  246 (252)
T ss_pred             HHHHhCccccCCCeEEecCCee
Confidence            9999976554 45899998754

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.77  E-value=9e-18  Score=148.21  Aligned_cols=167  Identities=15%  Similarity=0.119  Sum_probs=112.6

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc--------CCCEE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--------GSTAV  120 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--------~~d~V  120 (363)
                      ++++|+||||+|+||+++++.|+++|++|++++|++.....+....  .....+|+.|.+++..+++        .+|+|
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~~~--~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~l   80 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEAEG--LEAFQLDYAEPESIAALVAQVLELSGGRLDAL   80 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCC--ceEEEccCCCHHHHHHHHHHHHHHcCCCccEE
Confidence            3468999999999999999999999999999999876654432211  1244679998887766553        47999


Q ss_pred             EEccCCCCCCC---CChhhHHHHHHHHHHH----HHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhhh
Q 017977          121 VNLAGTPIGTR---WSSEIKKEIKESRIRV----TSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAK  193 (363)
Q Consensus       121 i~~a~~~~~~~---~~~~~~~~~~~~n~~~----~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~  193 (363)
                      ||+||......   .+.+..+..+++|+.+    ++.+++.+.+  .+..++|++||..+..+       .+....|..+
T Consensus        81 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~--~~~g~iv~isS~~~~~~-------~~~~~~Y~as  151 (277)
T PRK05993         81 FNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRK--QGQGRIVQCSSILGLVP-------MKYRGAYNAS  151 (277)
T ss_pred             EECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhh--cCCCEEEEECChhhcCC-------CCccchHHHH
Confidence            99998643322   2344567789999999    5556666666  66778999998743211       2233455555


Q ss_pred             hhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeC
Q 017977          194 VYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGK  234 (363)
Q Consensus       194 ~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~  234 (363)
                      |.+...|.++       ....+ ...|+++++++||.+-.+
T Consensus       152 K~a~~~~~~~-------l~~el-~~~gi~v~~v~Pg~v~T~  184 (277)
T PRK05993        152 KFAIEGLSLT-------LRMEL-QGSGIHVSLIEPGPIETR  184 (277)
T ss_pred             HHHHHHHHHH-------HHHHh-hhhCCEEEEEecCCccCc
Confidence            4332222211       01011 124899999999998765

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.77  E-value=2.4e-17  Score=143.79  Aligned_cols=221  Identities=15%  Similarity=0.060  Sum_probs=140.4

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCC-CCccccCcccccCcchHHhhcc-------CCCEEE
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV  121 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~d~Vi  121 (363)
                      .++|+||||+|+||+++++.|+++|++|++++|+.......... ........+|+.+.+++.++++       ++|+||
T Consensus        15 ~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi   94 (255)
T PRK06841         15 GKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDILV   94 (255)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEE
Confidence            46899999999999999999999999999999986532211110 1111144578988887776654       579999


Q ss_pred             EccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhhhhh
Q 017977          122 NLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYC  196 (363)
Q Consensus       122 ~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~  196 (363)
                      |++|.....   ....+..+..+++|+.++.++++++...  ..+.+++|++||.++.++       .+....|..+|.+
T Consensus        95 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-------~~~~~~Y~~sK~a  167 (255)
T PRK06841         95 NSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVA-------LERHVAYCASKAG  167 (255)
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccC-------CCCCchHHHHHHH
Confidence            999974321   2234556778999999999999988652  134568999999855444       2223355555433


Q ss_pred             cccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc-cchHHHHHHHhCCCCCCCCCccccccHHHHHHHHHH
Q 017977          197 LVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE  275 (363)
Q Consensus       197 ~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~  275 (363)
                      ...|.++       ....+. ..|+.++.++|+.+..+..... ... .........+      ...+.+++|+|++++.
T Consensus       168 ~~~~~~~-------la~e~~-~~gi~v~~v~pg~v~t~~~~~~~~~~-~~~~~~~~~~------~~~~~~~~~va~~~~~  232 (255)
T PRK06841        168 VVGMTKV-------LALEWG-PYGITVNAISPTVVLTELGKKAWAGE-KGERAKKLIP------AGRFAYPEEIAAAALF  232 (255)
T ss_pred             HHHHHHH-------HHHHHH-hhCeEEEEEEeCcCcCcccccccchh-HHHHHHhcCC------CCCCcCHHHHHHHHHH
Confidence            2222211       111111 1389999999999987642211 000 0001111111      2247899999999999


Q ss_pred             HhcCCC--CCc-eEEeeCCC
Q 017977          276 ALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       276 ~~~~~~--~~g-~~~i~~~~  292 (363)
                      ++....  ..| .+.+.++.
T Consensus       233 l~~~~~~~~~G~~i~~dgg~  252 (255)
T PRK06841        233 LASDAAAMITGENLVIDGGY  252 (255)
T ss_pred             HcCccccCccCCEEEECCCc
Confidence            997644  345 66665553

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.77  E-value=4.8e-17  Score=141.30  Aligned_cols=216  Identities=16%  Similarity=0.089  Sum_probs=137.3

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccc--------cCCCCCccccCcccccCcchHHhhcc------
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL--------IFPGKKTRFFPGVMIAEEPQWRDCIQ------  115 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--------~~~~~~~~~~~~~d~~~~~~~~~~~~------  115 (363)
                      +|+|+||||+|+||++++++|+++|++|++++|.......        .........+..+|+.+.+++.++++      
T Consensus         6 ~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   85 (249)
T PRK12827          6 SRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEEF   85 (249)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            4799999999999999999999999999998875332111        11111112245688988888776653      


Q ss_pred             -CCCEEEEccCCCCC---CCCChhhHHHHHHHHHHHHHHHHHHHH-hC--CCCCCCeEEEeccceecCCcccccccCCCc
Q 017977          116 -GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLIN-ES--PEGVRPSVLELVKPKYLMRAAHQEMITWLS  188 (363)
Q Consensus       116 -~~d~Vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~-~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~  188 (363)
                       ++|+|||++|....   .....+.....+++|+.++.++++++. ..  ..+.+++|++||.+++++       .+...
T Consensus        86 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~-------~~~~~  158 (249)
T PRK12827         86 GRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRG-------NRGQV  158 (249)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCC-------CCCCc
Confidence             58999999997542   223445567789999999999999998 11  145678999999854443       12223


Q ss_pred             chhhhhhhcccchhhHHHHHHHHHHHhc--cCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccH
Q 017977          189 DYCAKVYCLVSFNRGVLVCREWEGTALK--VNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHL  266 (363)
Q Consensus       189 ~~~~~~~~~~~y~~~k~~~~~~~~~~~~--~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  266 (363)
                      .|..+|          ............  ...+++++++||+.+.++.....   .+.-......+.      ..+.++
T Consensus       159 ~y~~sK----------~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~---~~~~~~~~~~~~------~~~~~~  219 (249)
T PRK12827        159 NYAASK----------AGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNA---APTEHLLNPVPV------QRLGEP  219 (249)
T ss_pred             hhHHHH----------HHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCccccc---chHHHHHhhCCC------cCCcCH
Confidence            454443          222222111111  12389999999999998753221   110111111111      124589


Q ss_pred             HHHHHHHHHHhcCCC--CCc-eEEeeCC
Q 017977          267 DDIVNLIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       267 ~D~a~a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      +|+|+++..++....  ..| .+++.++
T Consensus       220 ~~va~~~~~l~~~~~~~~~g~~~~~~~g  247 (249)
T PRK12827        220 DEVAALVAFLVSDAASYVTGQVIPVDGG  247 (249)
T ss_pred             HHHHHHHHHHcCcccCCccCcEEEeCCC
Confidence            999999999886543  334 6676654

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.77  E-value=9.1e-18  Score=145.01  Aligned_cols=199  Identities=15%  Similarity=0.103  Sum_probs=133.4

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccC----CCEEEEccC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQG----STAVVNLAG  125 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~----~d~Vi~~a~  125 (363)
                      |++++||||+|+||++++++|+++|++|++++|+++..+.+...........+|+.|.+++.+++++    .|.+||+||
T Consensus         1 ~~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~~ag   80 (240)
T PRK06101          1 MTAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIFNAG   80 (240)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEEcCc
Confidence            3589999999999999999999999999999998765443322211222456899999988887764    589999998


Q ss_pred             CCCCCC---CChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhcccchh
Q 017977          126 TPIGTR---WSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVSFNR  202 (363)
Q Consensus       126 ~~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~~y~~  202 (363)
                      ......   ...+..+..+++|+.++.++++++...-...+++|++||..+.++       .+....|..+|.+...+.+
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~-------~~~~~~Y~asK~a~~~~~~  153 (240)
T PRK06101         81 DCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELA-------LPRAEAYGASKAAVAYFAR  153 (240)
T ss_pred             ccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccC-------CCCCchhhHHHHHHHHHHH
Confidence            532211   344556778999999999999999863112346899988755443       2223355555432222211


Q ss_pred             hHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHHHHHhcCC
Q 017977          203 GVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNP  280 (363)
Q Consensus       203 ~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~  280 (363)
                      +      +.. .+ ...|+++++++|+.++++......             ...    ...+..+|+|+.++..++..
T Consensus       154 ~------l~~-e~-~~~gi~v~~v~pg~i~t~~~~~~~-------------~~~----~~~~~~~~~a~~i~~~i~~~  206 (240)
T PRK06101        154 T------LQL-DL-RPKGIEVVTVFPGFVATPLTDKNT-------------FAM----PMIITVEQASQEIRAQLARG  206 (240)
T ss_pred             H------HHH-HH-HhcCceEEEEeCCcCCCCCcCCCC-------------CCC----CcccCHHHHHHHHHHHHhcC
Confidence            0      000 11 124899999999999887432110             000    01478999999999999874

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.77  E-value=1.9e-17  Score=144.07  Aligned_cols=219  Identities=16%  Similarity=0.066  Sum_probs=137.8

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCC---CCccccCcccccCcchHHhhcc-------CCCE
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG---KKTRFFPGVMIAEEPQWRDCIQ-------GSTA  119 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~-------~~d~  119 (363)
                      .++|+||||+|+||+++++.|+++|++|++++|++.+.......   .....+..+|+.|.+++..+++       .+|+
T Consensus         5 ~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   84 (251)
T PRK07231          5 GKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVDI   84 (251)
T ss_pred             CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            46899999999999999999999999999999998654332111   1112245689999988877664       5799


Q ss_pred             EEEccCCCCCC----CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhh
Q 017977          120 VVNLAGTPIGT----RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAK  193 (363)
Q Consensus       120 Vi~~a~~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~  193 (363)
                      |||+++.....    ....+..+..+++|+.++.++.+.+...  ..+.+++|++||.++.++       .+....|..+
T Consensus        85 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-------~~~~~~y~~s  157 (251)
T PRK07231         85 LVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRP-------RPGLGWYNAS  157 (251)
T ss_pred             EEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCC-------CCCchHHHHH
Confidence            99999863221    2244566778999999977777766642  145677999999843222       1222344444


Q ss_pred             hhhcccchhhHHHHHHHHHHHhc-c-CCCceEEEEeeceEEeCCCCcc-cchHHHH--HHHhCCCCCCCCCccccccHHH
Q 017977          194 VYCLVSFNRGVLVCREWEGTALK-V-NKDVRLALIRIGIVLGKDGGAL-AKMIPLF--MMFAGGPLGSGQQWFSWIHLDD  268 (363)
Q Consensus       194 ~~~~~~y~~~k~~~~~~~~~~~~-~-~~~~~~~ilRp~~v~g~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~i~v~D  268 (363)
                                |.....+...... . ..+++++.++|+.+.++..... ....+..  .....      .....+++++|
T Consensus       158 ----------k~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~d  221 (251)
T PRK07231        158 ----------KGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLAT------IPLGRLGTPED  221 (251)
T ss_pred             ----------HHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcC------CCCCCCcCHHH
Confidence                      3222222111111 1 1389999999999976532111 0000011  11111      11234789999


Q ss_pred             HHHHHHHHhcCCC--CCc-eEEeeCC
Q 017977          269 IVNLIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       269 ~a~a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      +|++++.++....  ..| .+.+.++
T Consensus       222 va~~~~~l~~~~~~~~~g~~~~~~gg  247 (251)
T PRK07231        222 IANAALFLASDEASWITGVTLVVDGG  247 (251)
T ss_pred             HHHHHHHHhCccccCCCCCeEEECCC
Confidence            9999999997543  345 4555554

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.77  E-value=2.6e-18  Score=150.15  Aligned_cols=220  Identities=13%  Similarity=0.055  Sum_probs=138.1

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCC----CCccccCcccccCcchHHhhcc-------CCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG----KKTRFFPGVMIAEEPQWRDCIQ-------GST  118 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~-------~~d  118 (363)
                      .++|+||||+|+||++++++|+++|++|++++|++...+.....    ........+|+.|.+++..+++       ++|
T Consensus         5 ~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d   84 (258)
T PRK07890          5 GKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGRVD   84 (258)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCCcc
Confidence            46899999999999999999999999999999987543322111    1112245689998887766553       579


Q ss_pred             EEEEccCCCCC----CCCChhhHHHHHHHHHHHHHHHHHHHHhC-CCCCCCeEEEeccceecCCcccccccCCCcchhhh
Q 017977          119 AVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAK  193 (363)
Q Consensus       119 ~Vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~  193 (363)
                      +|||+|+....    .....+..+..+++|+.++..+++++.+. ....+++|++||....++       .+..+.|..+
T Consensus        85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~-------~~~~~~Y~~s  157 (258)
T PRK07890         85 ALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHS-------QPKYGAYKMA  157 (258)
T ss_pred             EEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccC-------CCCcchhHHH
Confidence            99999986322    12345667888999999999999998753 122357999998843221       2223345544


Q ss_pred             hhhcccchhhHHHHHHHHHHHhc--cCCCceEEEEeeceEEeCCCCcc-cch--------HHHHHHHhCCCCCCCCCccc
Q 017977          194 VYCLVSFNRGVLVCREWEGTALK--VNKDVRLALIRIGIVLGKDGGAL-AKM--------IPLFMMFAGGPLGSGQQWFS  262 (363)
Q Consensus       194 ~~~~~~y~~~k~~~~~~~~~~~~--~~~~~~~~ilRp~~v~g~~~~~~-~~~--------~~~~~~~~~~~~~~~~~~~~  262 (363)
                      |.          ...........  ...++++++++|+.++++..... ...        .........     ......
T Consensus       158 K~----------a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~  222 (258)
T PRK07890        158 KG----------ALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAA-----NSDLKR  222 (258)
T ss_pred             HH----------HHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhh-----cCCccc
Confidence            32          22222211111  12389999999999999853210 000        000111100     111224


Q ss_pred             cccHHHHHHHHHHHhcCCC--CCc-eEEeeCC
Q 017977          263 WIHLDDIVNLIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       263 ~i~v~D~a~a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      +.+++|+|+++..+++...  ..| .+.+.++
T Consensus       223 ~~~~~dva~a~~~l~~~~~~~~~G~~i~~~gg  254 (258)
T PRK07890        223 LPTDDEVASAVLFLASDLARAITGQTLDVNCG  254 (258)
T ss_pred             cCCHHHHHHHHHHHcCHhhhCccCcEEEeCCc
Confidence            6889999999999887432  334 4555544

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.77  E-value=7.1e-17  Score=140.09  Aligned_cols=219  Identities=14%  Similarity=0.103  Sum_probs=137.9

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcc-c----ccCCCCCccccCcccccCcchHHhhcc-------C
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-E----LIFPGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~----~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (363)
                      .+++|+||||+|++|+++++.|+++|++|+++.|+..+. .    .+...........+|+.+.+++.++++       +
T Consensus         4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (248)
T PRK05557          4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGG   83 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            346899999999999999999999999999988876531 1    111111112234568988887776654       5


Q ss_pred             CCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchh
Q 017977          117 STAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYC  191 (363)
Q Consensus       117 ~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~  191 (363)
                      +|+|||+++.....   ....+..+..++.|+.++.++++++...  ..+.+++|++||.+++++       .+....|.
T Consensus        84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~-------~~~~~~y~  156 (248)
T PRK05557         84 VDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMG-------NPGQANYA  156 (248)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcC-------CCCCchhH
Confidence            79999999874321   2234456778899999999998888753  134567999999856555       12233444


Q ss_pred             hhhhhcccchhhHHHHHHHHHHHhc--cCCCceEEEEeeceEEeCCCCcc-cchHHHHHHHhCCCCCCCCCccccccHHH
Q 017977          192 AKVYCLVSFNRGVLVCREWEGTALK--VNKDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAGGPLGSGQQWFSWIHLDD  268 (363)
Q Consensus       192 ~~~~~~~~y~~~k~~~~~~~~~~~~--~~~~~~~~ilRp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  268 (363)
                      .+          |.....+......  ...++++++++|+.+.++..... .....  ......+      ...+.+++|
T Consensus       157 ~s----------k~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~~--~~~~~~~------~~~~~~~~~  218 (248)
T PRK05557        157 AS----------KAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDALPEDVKE--AILAQIP------LGRLGQPEE  218 (248)
T ss_pred             HH----------HHHHHHHHHHHHHHhhhhCeEEEEEecCccCCccccccChHHHH--HHHhcCC------CCCCcCHHH
Confidence            44          3222222111111  12389999999998865532211 11111  1111111      123678999


Q ss_pred             HHHHHHHHhcCCC--CCc-eEEeeCCC
Q 017977          269 IVNLIYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       269 ~a~a~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      +++++..++....  ..| .|++.++.
T Consensus       219 va~~~~~l~~~~~~~~~g~~~~i~~~~  245 (248)
T PRK05557        219 IASAVAFLASDEAAYITGQTLHVNGGM  245 (248)
T ss_pred             HHHHHHHHcCcccCCccccEEEecCCc
Confidence            9999988886522  344 88887653

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.77  E-value=1.1e-17  Score=145.69  Aligned_cols=222  Identities=14%  Similarity=0.037  Sum_probs=138.8

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCC---CCccccCcccccCcchHHhhcc-------CCCE
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG---KKTRFFPGVMIAEEPQWRDCIQ-------GSTA  119 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~-------~~d~  119 (363)
                      +++++||||+|+||++|++.|+++|++|++++|+.+........   ........+|+.|.+++.++++       ++|+
T Consensus         5 ~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~   84 (252)
T PRK06138          5 GRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRLDV   84 (252)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            46899999999999999999999999999999987543322111   1112245689999888877654       6899


Q ss_pred             EEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhhh
Q 017977          120 VVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKV  194 (363)
Q Consensus       120 Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~  194 (363)
                      |||+++.....   ....+..+..+++|+.++.++.+++...  ..+.+++|++||.++.++       .+..+.|..+|
T Consensus        85 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~-------~~~~~~Y~~sK  157 (252)
T PRK06138         85 LVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAG-------GRGRAAYVASK  157 (252)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccC-------CCCccHHHHHH
Confidence            99999974332   2344556778999999987776665421  146678999999855444       22334555554


Q ss_pred             hhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc-cch--HHHH-HHHhCCCCCCCCCccccccHHHHH
Q 017977          195 YCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL-AKM--IPLF-MMFAGGPLGSGQQWFSWIHLDDIV  270 (363)
Q Consensus       195 ~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~-~~~--~~~~-~~~~~~~~~~~~~~~~~i~v~D~a  270 (363)
                      .....|.+      .+.. .+. ..+++++++||+.++++..... ...  ...+ ......     .....+++++|+|
T Consensus       158 ~a~~~~~~------~l~~-~~~-~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~d~a  224 (252)
T PRK06138        158 GAIASLTR------AMAL-DHA-TDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRAR-----HPMNRFGTAEEVA  224 (252)
T ss_pred             HHHHHHHH------HHHH-HHH-hcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhc-----CCCCCCcCHHHHH
Confidence            32222211      0011 111 2389999999999988743211 000  0001 111110     1112378999999


Q ss_pred             HHHHHHhcCCC--CCc-eEEeeCC
Q 017977          271 NLIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       271 ~a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      ++++.++.++.  ..| .+.+.++
T Consensus       225 ~~~~~l~~~~~~~~~g~~~~~~~g  248 (252)
T PRK06138        225 QAALFLASDESSFATGTTLVVDGG  248 (252)
T ss_pred             HHHHHHcCchhcCccCCEEEECCC
Confidence            99999997754  345 4555443

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.77  E-value=2.7e-17  Score=142.96  Aligned_cols=221  Identities=11%  Similarity=-0.014  Sum_probs=136.9

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEE-eCCCCccccc----CCCCCccccCcccccCcchHHhhcc-------CC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVL-TRSRSKAELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (363)
                      +++++||||+|+||++++++|+++|++|+++ .|+..+.+..    ...........+|+.|.+++..+++       .+
T Consensus         4 ~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (250)
T PRK08063          4 GKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGRL   83 (250)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            3689999999999999999999999998774 6665443221    1111112244589999888777665       57


Q ss_pred             CEEEEccCCCCCCC---CChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhh
Q 017977          118 TAVVNLAGTPIGTR---WSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCA  192 (363)
Q Consensus       118 d~Vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~  192 (363)
                      |+|||+||.....+   ...+.....+++|+.++.++++++.+.  ..+.+++|++||.++..+       .+....|..
T Consensus        84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-------~~~~~~y~~  156 (250)
T PRK08063         84 DVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRY-------LENYTTVGV  156 (250)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccC-------CCCccHHHH
Confidence            99999998643222   233444567889999999998888753  134568999999743221       122334554


Q ss_pred             hhhhcccchhhHHHHHHHHHHHhc--cCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHH
Q 017977          193 KVYCLVSFNRGVLVCREWEGTALK--VNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIV  270 (363)
Q Consensus       193 ~~~~~~~y~~~k~~~~~~~~~~~~--~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  270 (363)
                      +|          .....+......  ...++++++++|+.+..+...................     ....+++++|+|
T Consensus       157 sK----------~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~dva  221 (250)
T PRK08063        157 SK----------AALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNREELLEDARAKT-----PAGRMVEPEDVA  221 (250)
T ss_pred             HH----------HHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCchHHHHHHhcCC-----CCCCCcCHHHHH
Confidence            43          222222222111  1238999999999997764211111111111111111     112379999999


Q ss_pred             HHHHHHhcCCC---CCceEEeeCCC
Q 017977          271 NLIYEALSNPS---YRGVINGTAPN  292 (363)
Q Consensus       271 ~a~~~~~~~~~---~~g~~~i~~~~  292 (363)
                      ++++.++..+.   .+..+++.++.
T Consensus       222 ~~~~~~~~~~~~~~~g~~~~~~gg~  246 (250)
T PRK08063        222 NAVLFLCSPEADMIRGQTIIVDGGR  246 (250)
T ss_pred             HHHHHHcCchhcCccCCEEEECCCe
Confidence            99999987643   23477777664

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.77  E-value=6.5e-17  Score=139.16  Aligned_cols=214  Identities=20%  Similarity=0.117  Sum_probs=136.2

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc------CCCEEEEc
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ------GSTAVVNL  123 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~------~~d~Vi~~  123 (363)
                      .++|+||||+|+||++++++|+++|++|++++|+.....  ..     ....+|+.+.+++.++++      ++|+|||+
T Consensus         3 ~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~~--~~-----~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~   75 (234)
T PRK07577          3 SRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDDF--PG-----ELFACDLADIEQTAATLAQINEIHPVDAIVNN   75 (234)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccccc--Cc-----eEEEeeCCCHHHHHHHHHHHHHhCCCcEEEEC
Confidence            368999999999999999999999999999999876521  11     145689999888776665      57999999


Q ss_pred             cCCCCCCC---CChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhcc
Q 017977          124 AGTPIGTR---WSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLV  198 (363)
Q Consensus       124 a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~  198 (363)
                      ++......   ...+.....+++|+.++.++.+++...  ..+.+++|++||. ..|+       .+....|..+|.+..
T Consensus        76 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~-~~~~-------~~~~~~Y~~sK~a~~  147 (234)
T PRK07577         76 VGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSR-AIFG-------ALDRTSYSAAKSALV  147 (234)
T ss_pred             CCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccc-cccC-------CCCchHHHHHHHHHH
Confidence            99743322   134556678899999987776665432  1456789999998 5554       122345555432222


Q ss_pred             cchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHH--HHHhCCCCCCCCCccccccHHHHHHHHHHH
Q 017977          199 SFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPLGSGQQWFSWIHLDDIVNLIYEA  276 (363)
Q Consensus       199 ~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~  276 (363)
                      .+.+      .+.. .+. ..|++++++||+.+.++.........+..  ......+.      ..+...+|+|++++.+
T Consensus       148 ~~~~------~~a~-e~~-~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~a~~~~~l  213 (234)
T PRK07577        148 GCTR------TWAL-ELA-EYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASIPM------RRLGTPEEVAAAIAFL  213 (234)
T ss_pred             HHHH------HHHH-HHH-hhCcEEEEEecCcccCcccccccccchhHHHHHhhcCCC------CCCcCHHHHHHHHHHH
Confidence            2211      0111 111 23899999999999876432111100111  11111111      1245789999999999


Q ss_pred             hcCCC--CCc-eEEeeCCC
Q 017977          277 LSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       277 ~~~~~--~~g-~~~i~~~~  292 (363)
                      +..+.  ..| .+.+.++.
T Consensus       214 ~~~~~~~~~g~~~~~~g~~  232 (234)
T PRK07577        214 LSDDAGFITGQVLGVDGGG  232 (234)
T ss_pred             hCcccCCccceEEEecCCc
Confidence            97653  344 66665543

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.77  E-value=5.8e-17  Score=141.62  Aligned_cols=224  Identities=18%  Similarity=0.137  Sum_probs=139.0

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCc-cccc----CCCCCccccCcccccCcchHHhhcc-------
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK-AELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------  115 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-------  115 (363)
                      .++|++|||||+|+||+++++.|+++|++|++++++..+ .+..    ...........+|+.|.+++.++++       
T Consensus         7 ~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~   86 (258)
T PRK09134          7 AAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALG   86 (258)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            345789999999999999999999999999988775432 2111    1111112245679999888877664       


Q ss_pred             CCCEEEEccCCCCC---CCCChhhHHHHHHHHHHHHHHHHHHHHhC-C-CCCCCeEEEeccceecCCcccccccCCCcch
Q 017977          116 GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES-P-EGVRPSVLELVKPKYLMRAAHQEMITWLSDY  190 (363)
Q Consensus       116 ~~d~Vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~  190 (363)
                      .+|+|||+||....   .....+..+..+++|+.++.++++++... . ....++|+++|. ..+.      ..+....|
T Consensus        87 ~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~-~~~~------~~p~~~~Y  159 (258)
T PRK09134         87 PITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQ-RVWN------LNPDFLSY  159 (258)
T ss_pred             CCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECch-hhcC------CCCCchHH
Confidence            47999999986432   12344566788999999999999988763 1 223457777765 2221      01112234


Q ss_pred             hhhhhhcccchhhHHHHHHHHHHHhc-cCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHH
Q 017977          191 CAKVYCLVSFNRGVLVCREWEGTALK-VNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDI  269 (363)
Q Consensus       191 ~~~~~~~~~y~~~k~~~~~~~~~~~~-~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  269 (363)
                      ..+          |.....+.+.... ...++.++.++||.+..........+.   ......+.+      ...+++|+
T Consensus       160 ~~s----------K~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~~~~~~~---~~~~~~~~~------~~~~~~d~  220 (258)
T PRK09134        160 TLS----------KAALWTATRTLAQALAPRIRVNAIGPGPTLPSGRQSPEDFA---RQHAATPLG------RGSTPEEI  220 (258)
T ss_pred             HHH----------HHHHHHHHHHHHHHhcCCcEEEEeecccccCCcccChHHHH---HHHhcCCCC------CCcCHHHH
Confidence            444          4222222222211 112599999999988764321111111   111122221      24779999


Q ss_pred             HHHHHHHhcCCCCCc-eEEeeCCCCcCHH
Q 017977          270 VNLIYEALSNPSYRG-VINGTAPNPVRLA  297 (363)
Q Consensus       270 a~a~~~~~~~~~~~g-~~~i~~~~~~s~~  297 (363)
                      |++++.+++.+...| .+++.++..++|.
T Consensus       221 a~~~~~~~~~~~~~g~~~~i~gg~~~~~~  249 (258)
T PRK09134        221 AAAVRYLLDAPSVTGQMIAVDGGQHLAWL  249 (258)
T ss_pred             HHHHHHHhcCCCcCCCEEEECCCeecccc
Confidence            999999998766555 7787777655553

>PRK05717 oxidoreductase; Validated

Probab=99.76  E-value=3.6e-17  Score=142.62  Aligned_cols=220  Identities=14%  Similarity=0.021  Sum_probs=138.2

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCC-CCccccCcccccCcchHHhhcc-------CCCEE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTAV  120 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~d~V  120 (363)
                      .+++|+||||+|+||+++++.|+++|++|++++|+..+....... .....+..+|+.+.+++.++++       .+|+|
T Consensus         9 ~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l   88 (255)
T PRK05717          9 NGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDAL   88 (255)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            346899999999999999999999999999999876543322111 1112245689999887765543       47999


Q ss_pred             EEccCCCCCC-----CCChhhHHHHHHHHHHHHHHHHHHHHhC-CCCCCCeEEEeccceecCCcccccccCCCcchhhhh
Q 017977          121 VNLAGTPIGT-----RWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKV  194 (363)
Q Consensus       121 i~~a~~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~  194 (363)
                      ||+||.....     ..+.+..+..+++|+.++.++++++.+. .....++|++||..+.++       .+....|..+ 
T Consensus        89 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~-------~~~~~~Y~~s-  160 (255)
T PRK05717         89 VCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQS-------EPDTEAYAAS-  160 (255)
T ss_pred             EECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCC-------CCCCcchHHH-
Confidence            9999974221     1244556789999999999999999742 123356899998854333       1222345544 


Q ss_pred             hhcccchhhHHHHHHHHHHHhcc-CCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHH
Q 017977          195 YCLVSFNRGVLVCREWEGTALKV-NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLI  273 (363)
Q Consensus       195 ~~~~~y~~~k~~~~~~~~~~~~~-~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~  273 (363)
                               |.....+....... ..++++.+++|+.+.++..... ...+..........     ...+.+++|+|.++
T Consensus       161 ---------Kaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~~-~~~~~~~~~~~~~~-----~~~~~~~~~va~~~  225 (255)
T PRK05717        161 ---------KGGLLALTHALAISLGPEIRVNAVSPGWIDARDPSQR-RAEPLSEADHAQHP-----AGRVGTVEDVAAMV  225 (255)
T ss_pred             ---------HHHHHHHHHHHHHHhcCCCEEEEEecccCcCCccccc-cchHHHHHHhhcCC-----CCCCcCHHHHHHHH
Confidence                     32222222222111 2269999999999998753211 01111111111111     12367899999999


Q ss_pred             HHHhcCCC--CCc-eEEeeCC
Q 017977          274 YEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       274 ~~~~~~~~--~~g-~~~i~~~  291 (363)
                      ..+++...  ..| .+.+.++
T Consensus       226 ~~l~~~~~~~~~g~~~~~~gg  246 (255)
T PRK05717        226 AWLLSRQAGFVTGQEFVVDGG  246 (255)
T ss_pred             HHHcCchhcCccCcEEEECCC
Confidence            98886543  234 5666544

>PRK09186 flagellin modification protein A; Provisional

Probab=99.76  E-value=1.9e-17  Score=144.48  Aligned_cols=222  Identities=15%  Similarity=0.061  Sum_probs=135.9

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccC----CC--CCccccCcccccCcchHHhhccC------
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PG--KKTRFFPGVMIAEEPQWRDCIQG------  116 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~--~~~~~~~~~d~~~~~~~~~~~~~------  116 (363)
                      ..++|+||||+|+||+++++.|+++|++|++++|++...+...    ..  .....+..+|+.|.+++.+++++      
T Consensus         3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~   82 (256)
T PRK09186          3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYG   82 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence            3479999999999999999999999999999999876543221    10  11111335799999888777653      


Q ss_pred             -CCEEEEccCCCCC------CCCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecC-CcccccccCC
Q 017977          117 -STAVVNLAGTPIG------TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLM-RAAHQEMITW  186 (363)
Q Consensus       117 -~d~Vi~~a~~~~~------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg-~~~~~e~~~~  186 (363)
                       +|+|||+|+....      ...+.+.....+++|+.++..+++++.+.  ..+.+++|++||.++.++ .....+..+.
T Consensus        83 ~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~  162 (256)
T PRK09186         83 KIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGTSM  162 (256)
T ss_pred             CccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccchhcccccc
Confidence             7999999974321      12334556777889998877666655542  145678999999754443 1111122111


Q ss_pred             --CcchhhhhhhcccchhhHHHHHHHHHHHhc--cCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccc
Q 017977          187 --LSDYCAKVYCLVSFNRGVLVCREWEGTALK--VNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFS  262 (363)
Q Consensus       187 --~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~--~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (363)
                        ...|..          +|............  ...++++++++|+.++++...   .+...+   .....     ...
T Consensus       163 ~~~~~Y~~----------sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~~---~~~~~~---~~~~~-----~~~  221 (256)
T PRK09186        163 TSPVEYAA----------IKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPE---AFLNAY---KKCCN-----GKG  221 (256)
T ss_pred             CCcchhHH----------HHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCCH---HHHHHH---HhcCC-----ccC
Confidence              113443          34222222211111  123899999999988765321   111111   11110     124


Q ss_pred             cccHHHHHHHHHHHhcCCC--CCc-eEEeeCC
Q 017977          263 WIHLDDIVNLIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       263 ~i~v~D~a~a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      +++++|+|++++.++.+..  ..| .+.+.++
T Consensus       222 ~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g  253 (256)
T PRK09186        222 MLDPDDICGTLVFLLSDQSKYITGQNIIVDDG  253 (256)
T ss_pred             CCCHHHhhhhHhheeccccccccCceEEecCC
Confidence            7899999999999997554  345 5555554

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.76  E-value=4.5e-17  Score=141.59  Aligned_cols=219  Identities=16%  Similarity=0.089  Sum_probs=138.3

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccC----CCCCccccCcccccCcchHHhhcc-------CCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GST  118 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~~d  118 (363)
                      ++++|||||+|+||++++++|+++|++|++++|+......+.    ..........+|+.|.+++.++++       ++|
T Consensus         3 ~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~d   82 (250)
T TIGR03206         3 DKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPVD   82 (250)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            468999999999999999999999999999999875543221    111112245678888888777664       589


Q ss_pred             EEEEccCCCCCCC---CChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhh
Q 017977          119 AVVNLAGTPIGTR---WSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAK  193 (363)
Q Consensus       119 ~Vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~  193 (363)
                      +|||+++......   ...+..+..+++|+.++.++++++...  ..+.+++|++||.++.++       .+..+.|..+
T Consensus        83 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~-------~~~~~~Y~~s  155 (250)
T TIGR03206        83 VLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVG-------SSGEAVYAAC  155 (250)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccC-------CCCCchHHHH
Confidence            9999998642211   233445678999999999988887532  145678999999844322       1223345554


Q ss_pred             hhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc-------cchHHHHHHHhCCCCCCCCCccccccH
Q 017977          194 VYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL-------AKMIPLFMMFAGGPLGSGQQWFSWIHL  266 (363)
Q Consensus       194 ~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~i~v  266 (363)
                      |.+...+.+      .+..+ .. ..++++++++|+.++++.....       ..+...+  ....+.      ..+...
T Consensus       156 K~a~~~~~~------~la~~-~~-~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~------~~~~~~  219 (250)
T TIGR03206       156 KGGLVAFSK------TMARE-HA-RHGITVNVVCPGPTDTALLDDICGGAENPEKLREAF--TRAIPL------GRLGQP  219 (250)
T ss_pred             HHHHHHHHH------HHHHH-Hh-HhCcEEEEEecCcccchhHHhhhhccCChHHHHHHH--HhcCCc------cCCcCH
Confidence            322221111      11111 11 1389999999999988742111       0111111  111111      125678


Q ss_pred             HHHHHHHHHHhcCCC--CCc-eEEeeCC
Q 017977          267 DDIVNLIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       267 ~D~a~a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      +|+|+++..++....  ..| ++++.++
T Consensus       220 ~dva~~~~~l~~~~~~~~~g~~~~~~~g  247 (250)
T TIGR03206       220 DDLPGAILFFSSDDASFITGQVLSVSGG  247 (250)
T ss_pred             HHHHHHHHHHcCcccCCCcCcEEEeCCC
Confidence            999999999887644  234 8888765

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.76  E-value=2.7e-17  Score=144.98  Aligned_cols=201  Identities=15%  Similarity=0.133  Sum_probs=131.4

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc-------CCCEEEE
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVVN  122 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~Vi~  122 (363)
                      +++|+||||+|+||+++++.|+++|++|++++|+++................+|+.|.+++.++++       ++|++||
T Consensus         5 ~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~   84 (273)
T PRK07825          5 GKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLVN   84 (273)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            468999999999999999999999999999999876543322111112245689999887765543       5799999


Q ss_pred             ccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhc
Q 017977          123 LAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCL  197 (363)
Q Consensus       123 ~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~  197 (363)
                      +||.....   ....+.....+++|+.++.++++++...  ..+..++|++||.++..+       .+....|..+|...
T Consensus        85 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------~~~~~~Y~asKaa~  157 (273)
T PRK07825         85 NAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIP-------VPGMATYCASKHAV  157 (273)
T ss_pred             CCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCC-------CCCCcchHHHHHHH
Confidence            99974332   2234456778999999988877766532  146678999999854222       22334555554322


Q ss_pred             ccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHHHHHh
Q 017977          198 VSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEAL  277 (363)
Q Consensus       198 ~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~  277 (363)
                      ..|..      ....+ .. ..|+++++++|+.+..+.....             +   ......+++++|+|++++.++
T Consensus       158 ~~~~~------~l~~e-l~-~~gi~v~~v~Pg~v~t~~~~~~-------------~---~~~~~~~~~~~~va~~~~~~l  213 (273)
T PRK07825        158 VGFTD------AARLE-LR-GTGVHVSVVLPSFVNTELIAGT-------------G---GAKGFKNVEPEDVAAAIVGTV  213 (273)
T ss_pred             HHHHH------HHHHH-hh-ccCcEEEEEeCCcCcchhhccc-------------c---cccCCCCCCHHHHHHHHHHHH
Confidence            22211      11111 11 2489999999998765421100             0   011224789999999999999


Q ss_pred             cCCC
Q 017977          278 SNPS  281 (363)
Q Consensus       278 ~~~~  281 (363)
                      .++.
T Consensus       214 ~~~~  217 (273)
T PRK07825        214 AKPR  217 (273)
T ss_pred             hCCC
Confidence            8754

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.76  E-value=8.5e-18  Score=146.88  Aligned_cols=220  Identities=19%  Similarity=0.090  Sum_probs=138.9

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccc---cCCCCCccccCcccccCcchHHhhcc-------CCCE
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL---IFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTA  119 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~  119 (363)
                      .++++||||+|+||+++++.|+++|++|++++|+.+....   +...........+|+.+.+++..+++       ++|+
T Consensus         7 ~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   86 (258)
T PRK08628          7 DKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRIDG   86 (258)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence            4689999999999999999999999999999998765311   11111112245689998888877664       5799


Q ss_pred             EEEccCCCCCC--CCChhhHHHHHHHHHHHHHHHHHHHHhC-CCCCCCeEEEeccceecCCcccccccCCCcchhhhhhh
Q 017977          120 VVNLAGTPIGT--RWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYC  196 (363)
Q Consensus       120 Vi~~a~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~  196 (363)
                      |||+||.....  ....+..+..+++|+.++.++.+++.+. .....++|++||..++++       .+....|..+   
T Consensus        87 vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~-------~~~~~~Y~~s---  156 (258)
T PRK08628         87 LVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTG-------QGGTSGYAAA---  156 (258)
T ss_pred             EEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccC-------CCCCchhHHH---
Confidence            99999963221  2223556778999999999998887653 133467999999854333       1223345444   


Q ss_pred             cccchhhHHHHHHHHHHHhc--cCCCceEEEEeeceEEeCCCCcc-cch---HHHH-HHHhCCCCCCCCCccccccHHHH
Q 017977          197 LVSFNRGVLVCREWEGTALK--VNKDVRLALIRIGIVLGKDGGAL-AKM---IPLF-MMFAGGPLGSGQQWFSWIHLDDI  269 (363)
Q Consensus       197 ~~~y~~~k~~~~~~~~~~~~--~~~~~~~~ilRp~~v~g~~~~~~-~~~---~~~~-~~~~~~~~~~~~~~~~~i~v~D~  269 (363)
                             |.....+......  ...+++++.++|+.++++..... ...   .... ......+.+     ..++.++|+
T Consensus       157 -------K~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~dv  224 (258)
T PRK08628        157 -------KGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIPLG-----HRMTTAEEI  224 (258)
T ss_pred             -------HHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhcCCcc-----ccCCCHHHH
Confidence                   3222222222211  12489999999999998742110 000   0001 111111111     137889999


Q ss_pred             HHHHHHHhcCCC--CCc-eEEeeCC
Q 017977          270 VNLIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       270 a~a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      |+++..++....  ..| .+.+.++
T Consensus       225 a~~~~~l~~~~~~~~~g~~~~~~gg  249 (258)
T PRK08628        225 ADTAVFLLSERSSHTTGQWLFVDGG  249 (258)
T ss_pred             HHHHHHHhChhhccccCceEEecCC
Confidence            999999997653  345 6666554

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.76  E-value=2.6e-17  Score=143.65  Aligned_cols=198  Identities=12%  Similarity=0.050  Sum_probs=131.4

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCC---CccccCcccccCcchHHhhcc-------CCCE
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK---KTRFFPGVMIAEEPQWRDCIQ-------GSTA  119 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~~-------~~d~  119 (363)
                      +|+|+||||+|+||+++++.|+++|++|++++|+...........   ....+..+|+.|.+++.++++       .+|+
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~   81 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV   81 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            368999999999999999999999999999999875543321111   022355689999888877654       3799


Q ss_pred             EEEccCCCCCCC----CChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhh
Q 017977          120 VVNLAGTPIGTR----WSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAK  193 (363)
Q Consensus       120 Vi~~a~~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~  193 (363)
                      |||+||......    .+.+..+..+++|+.++.++++++...  ..+..++|++||..+.++       .+....|..+
T Consensus        82 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~-------~~~~~~Y~as  154 (257)
T PRK07024         82 VIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRG-------LPGAGAYSAS  154 (257)
T ss_pred             EEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCC-------CCCCcchHHH
Confidence            999999743211    234567889999999999877744321  145577999999855444       2233345555


Q ss_pred             hhhcccchhhHHHHHHHHHHHh--ccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHH
Q 017977          194 VYCLVSFNRGVLVCREWEGTAL--KVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVN  271 (363)
Q Consensus       194 ~~~~~~y~~~k~~~~~~~~~~~--~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  271 (363)
                      |.+          .........  ....|+++++++|+.+.++.....             ....    -.++..+|+|+
T Consensus       155 K~a----------~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~-------------~~~~----~~~~~~~~~a~  207 (257)
T PRK07024        155 KAA----------AIKYLESLRVELRPAGVRVVTIAPGYIRTPMTAHN-------------PYPM----PFLMDADRFAA  207 (257)
T ss_pred             HHH----------HHHHHHHHHHHhhccCcEEEEEecCCCcCchhhcC-------------CCCC----CCccCHHHHHH
Confidence            422          222211111  112489999999999987632110             0000    01468999999


Q ss_pred             HHHHHhcCCC
Q 017977          272 LIYEALSNPS  281 (363)
Q Consensus       272 a~~~~~~~~~  281 (363)
                      .++.++.+..
T Consensus       208 ~~~~~l~~~~  217 (257)
T PRK07024        208 RAARAIARGR  217 (257)
T ss_pred             HHHHHHhCCC
Confidence            9999997643

>PRK06196 oxidoreductase; Provisional

Probab=99.76  E-value=5.8e-17  Score=145.66  Aligned_cols=223  Identities=14%  Similarity=0.026  Sum_probs=133.7

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc-------CCCEEE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV  121 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~Vi  121 (363)
                      .+++|+||||+|+||++++++|+++|++|++++|+..................+|+.|.+++.++++       ++|+||
T Consensus        25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li  104 (315)
T PRK06196         25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDILI  104 (315)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence            3468999999999999999999999999999999876543322111112255689999888876653       589999


Q ss_pred             EccCCCCCC-CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhcc
Q 017977          122 NLAGTPIGT-RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLV  198 (363)
Q Consensus       122 ~~a~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~  198 (363)
                      |+||..... ....+..+..+++|+.++..+.+++...  ..+..++|++||.+..++....++... ...+.    ...
T Consensus       105 ~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~-~~~~~----~~~  179 (315)
T PRK06196        105 NNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHF-TRGYD----KWL  179 (315)
T ss_pred             ECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccCc-cCCCC----hHH
Confidence            999964321 2233445778999999976666654432  144567999999843333111111100 00111    112


Q ss_pred             cchhhHHHHHHHHHHHhc--cCCCceEEEEeeceEEeCCCCcccchHHH-HHHHh--CCCCCCCCCccccccHHHHHHHH
Q 017977          199 SFNRGVLVCREWEGTALK--VNKDVRLALIRIGIVLGKDGGALAKMIPL-FMMFA--GGPLGSGQQWFSWIHLDDIVNLI  273 (363)
Q Consensus       199 ~y~~~k~~~~~~~~~~~~--~~~~~~~~ilRp~~v~g~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~i~v~D~a~a~  273 (363)
                      .|..+|.....+......  ...|+++++++||.+.++.......-... .....  +.++.     ..+..++|+|.++
T Consensus       180 ~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~a~~~  254 (315)
T PRK06196        180 AYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREEQVALGWVDEHGNPID-----PGFKTPAQGAATQ  254 (315)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhhhhhhhhhhhhhhhhh-----hhcCCHhHHHHHH
Confidence            355556443333322221  12489999999999998853221110000 00000  00110     0246789999999


Q ss_pred             HHHhcCCC
Q 017977          274 YEALSNPS  281 (363)
Q Consensus       274 ~~~~~~~~  281 (363)
                      +.++..+.
T Consensus       255 ~~l~~~~~  262 (315)
T PRK06196        255 VWAATSPQ  262 (315)
T ss_pred             HHHhcCCc
Confidence            99986544

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.76  E-value=5e-17  Score=141.20  Aligned_cols=221  Identities=17%  Similarity=0.129  Sum_probs=136.4

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCC-CCccccCcccccCcchHHhhc-------cCCCEEE
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCI-------QGSTAVV  121 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~-------~~~d~Vi  121 (363)
                      +++|+||||+|+||++++++|+++|++|++++|+.......... ........+|+.|.+++..++       .++|+||
T Consensus         6 ~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi   85 (249)
T PRK06500          6 GKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDAVF   85 (249)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEE
Confidence            46899999999999999999999999999999986543322111 111123457888777655443       3689999


Q ss_pred             EccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhcc
Q 017977          122 NLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLV  198 (363)
Q Consensus       122 ~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~  198 (363)
                      |+|+.....   .+..+..+..+++|+.++.++++++.+......++|++||..+.|+       .+....|..+|.+..
T Consensus        86 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~-------~~~~~~Y~~sK~a~~  158 (249)
T PRK06500         86 INAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIG-------MPNSSVYAASKAALL  158 (249)
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccC-------CCCccHHHHHHHHHH
Confidence            999874322   2345667889999999999999999853112345788887655555       222345555432222


Q ss_pred             cchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCc---ccchHHHH--HHHhCCCCCCCCCccccccHHHHHHHH
Q 017977          199 SFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA---LAKMIPLF--MMFAGGPLGSGQQWFSWIHLDDIVNLI  273 (363)
Q Consensus       199 ~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~---~~~~~~~~--~~~~~~~~~~~~~~~~~i~v~D~a~a~  273 (363)
                      .+.++      +.. .+ ...|++++++||+.++++....   .......+  ......++.      -+..++|+|+++
T Consensus       159 ~~~~~------la~-e~-~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~va~~~  224 (249)
T PRK06500        159 SLAKT------LSG-EL-LPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLG------RFGTPEEIAKAV  224 (249)
T ss_pred             HHHHH------HHH-Hh-hhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCCC------CCcCHHHHHHHH
Confidence            22111      001 11 1238999999999999873211   01111111  111222221      256899999999


Q ss_pred             HHHhcCCC--CCc-eEEeeCC
Q 017977          274 YEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       274 ~~~~~~~~--~~g-~~~i~~~  291 (363)
                      ..++....  ..| .+.+.++
T Consensus       225 ~~l~~~~~~~~~g~~i~~~gg  245 (249)
T PRK06500        225 LYLASDESAFIVGSEIIVDGG  245 (249)
T ss_pred             HHHcCccccCccCCeEEECCC
Confidence            99887543  223 4555444

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.75  E-value=7.1e-17  Score=140.34  Aligned_cols=218  Identities=13%  Similarity=0.094  Sum_probs=139.3

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccC----CCCCccccCcccccCcchHHhhcc-------CCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GST  118 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~~d  118 (363)
                      .++|+||||+|+||+++++.|+++|++|++++|++.+.....    ..........+|+.|.+++.++++       ++|
T Consensus         7 ~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   86 (250)
T PRK12939          7 GKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGLD   86 (250)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            478999999999999999999999999999999876433221    111112244579998888776663       689


Q ss_pred             EEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhh
Q 017977          119 AVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAK  193 (363)
Q Consensus       119 ~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~  193 (363)
                      +|||++|.....   ....+..+..++.|+.++.++++++.+.  ..+..++|++||..+.++       .+....|..+
T Consensus        87 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-------~~~~~~y~~s  159 (250)
T PRK12939         87 GLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWG-------APKLGAYVAS  159 (250)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccC-------CCCcchHHHH
Confidence            999999974321   2234455677899999999999888652  123457999999744332       1222345444


Q ss_pred             hhhcccchhhHHHHHHHHHHHhc--cCCCceEEEEeeceEEeCCCCccc--chHHHHHHHhCCCCCCCCCccccccHHHH
Q 017977          194 VYCLVSFNRGVLVCREWEGTALK--VNKDVRLALIRIGIVLGKDGGALA--KMIPLFMMFAGGPLGSGQQWFSWIHLDDI  269 (363)
Q Consensus       194 ~~~~~~y~~~k~~~~~~~~~~~~--~~~~~~~~ilRp~~v~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  269 (363)
                      |.+          ..........  ...++.++.++|+.+.++......  .+...+.  ..      .....+++++|+
T Consensus       160 K~~----------~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~--~~------~~~~~~~~~~dv  221 (250)
T PRK12939        160 KGA----------VIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPADERHAYYL--KG------RALERLQVPDDV  221 (250)
T ss_pred             HHH----------HHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCChHHHHHHH--hc------CCCCCCCCHHHH
Confidence            322          2222111111  123899999999988776432211  1111111  11      122347899999


Q ss_pred             HHHHHHHhcCCC--CCc-eEEeeCCC
Q 017977          270 VNLIYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       270 a~a~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      |++++.++....  ..| .+.+.++.
T Consensus       222 a~~~~~l~~~~~~~~~G~~i~~~gg~  247 (250)
T PRK12939        222 AGAVLFLLSDAARFVTGQLLPVNGGF  247 (250)
T ss_pred             HHHHHHHhCccccCccCcEEEECCCc
Confidence            999999997543  344 77776653

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.75  E-value=1.3e-16  Score=141.62  Aligned_cols=223  Identities=12%  Similarity=0.033  Sum_probs=139.3

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcc-cc----cCCCCCccccCcccccCcchHHhhcc-------C
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-EL----IFPGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~----~~~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (363)
                      ++|+||||||+|+||++++++|+++|++|++++|+.... ..    +........+..+|+.+.+++.++++       +
T Consensus        45 ~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~~  124 (290)
T PRK06701         45 KGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELGR  124 (290)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            346899999999999999999999999999999976431 11    11111112244689998887776654       5


Q ss_pred             CCEEEEccCCCCC----CCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhh
Q 017977          117 STAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCA  192 (363)
Q Consensus       117 ~d~Vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~  192 (363)
                      +|+|||+|+....    ...+.+.....+++|+.++.++++++.+......++|++||. ..|..      .+....|..
T Consensus       125 iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~-~~~~~------~~~~~~Y~~  197 (290)
T PRK06701        125 LDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSI-TGYEG------NETLIDYSA  197 (290)
T ss_pred             CCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecc-cccCC------CCCcchhHH
Confidence            7999999986322    123345567789999999999999997631123579999998 33321      122234554


Q ss_pred             hhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHH
Q 017977          193 KVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL  272 (363)
Q Consensus       193 ~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a  272 (363)
                      +|.+...|.++       ....+. ..|++++.++|+.++.+....... -.......     .......+.+++|+|++
T Consensus       198 sK~a~~~l~~~-------la~~~~-~~gIrv~~i~pG~v~T~~~~~~~~-~~~~~~~~-----~~~~~~~~~~~~dva~~  263 (290)
T PRK06701        198 TKGAIHAFTRS-------LAQSLV-QKGIRVNAVAPGPIWTPLIPSDFD-EEKVSQFG-----SNTPMQRPGQPEELAPA  263 (290)
T ss_pred             HHHHHHHHHHH-------HHHHhh-hcCeEEEEEecCCCCCcccccccC-HHHHHHHH-----hcCCcCCCcCHHHHHHH
Confidence            43322222111       111111 138999999999998874321100 00111111     11112347889999999


Q ss_pred             HHHHhcCCC--CCc-eEEeeCCC
Q 017977          273 IYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       273 ~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      ++.++....  ..| .+++.++.
T Consensus       264 ~~~ll~~~~~~~~G~~i~idgg~  286 (290)
T PRK06701        264 YVFLASPDSSYITGQMLHVNGGV  286 (290)
T ss_pred             HHHHcCcccCCccCcEEEeCCCc
Confidence            999997653  344 77777653

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.75  E-value=6.8e-17  Score=140.67  Aligned_cols=220  Identities=13%  Similarity=-0.066  Sum_probs=136.7

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc-------CCCEEEE
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVVN  122 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~Vi~  122 (363)
                      .+++|||||+|+||++++++|+++|++|++++|+....     .........+|+.+.+++.++++       .+|+|||
T Consensus         8 ~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~   82 (252)
T PRK08220          8 GKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFLTQ-----EDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVLVN   82 (252)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecchhhh-----cCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            46899999999999999999999999999999987111     11111244689999888887765       4799999


Q ss_pred             ccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhc
Q 017977          123 LAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCL  197 (363)
Q Consensus       123 ~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~  197 (363)
                      +++.....   ..+.+.....+++|+.++..+++++...  ..+..++|++||.+..++       .+....|..+|.+ 
T Consensus        83 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~-------~~~~~~Y~~sK~a-  154 (252)
T PRK08220         83 AAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVP-------RIGMAAYGASKAA-  154 (252)
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccC-------CCCCchhHHHHHH-
Confidence            99974321   2245567788999999999999887642  134457999998743221       1223345544322 


Q ss_pred             ccchhhHHHHHHHHHHHhcc--CCCceEEEEeeceEEeCCCCccc--chH-HHHHHHhCCCCCCCCCccccccHHHHHHH
Q 017977          198 VSFNRGVLVCREWEGTALKV--NKDVRLALIRIGIVLGKDGGALA--KMI-PLFMMFAGGPLGSGQQWFSWIHLDDIVNL  272 (363)
Q Consensus       198 ~~y~~~k~~~~~~~~~~~~~--~~~~~~~ilRp~~v~g~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~i~v~D~a~a  272 (363)
                               ...+.......  ..++++++++|+.++++......  ... ..........+........+++++|+|++
T Consensus       155 ---------~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  225 (252)
T PRK08220        155 ---------LTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPLGKIARPQEIANA  225 (252)
T ss_pred             ---------HHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhcCCCcccCCHHHHHHH
Confidence                     22221111111  23899999999999988532110  000 00000000000011112358999999999


Q ss_pred             HHHHhcCCC--CCc-eEEeeCC
Q 017977          273 IYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       273 ~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      ++.++....  ..| .+.+.++
T Consensus       226 ~~~l~~~~~~~~~g~~i~~~gg  247 (252)
T PRK08220        226 VLFLASDLASHITLQDIVVDGG  247 (252)
T ss_pred             HHHHhcchhcCccCcEEEECCC
Confidence            999986543  334 5555554

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.75  E-value=4.5e-17  Score=140.61  Aligned_cols=202  Identities=13%  Similarity=0.086  Sum_probs=132.4

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccC----CCCCccccCcccccCcchHHhhcc-------CCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GST  118 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~~d  118 (363)
                      .++++||||+|+||++++++|+++|++|++++|+..+.....    ..........+|+.+.+++.++++       ++|
T Consensus         7 ~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   86 (239)
T PRK07666          7 GKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSID   86 (239)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCcc
Confidence            468999999999999999999999999999999875433221    111112244678888888877665       689


Q ss_pred             EEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhh
Q 017977          119 AVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAK  193 (363)
Q Consensus       119 ~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~  193 (363)
                      +|||+++.....   ....+..+..+++|+.++.++.+++...  ..+.+++|++||..+.++       .+....|..+
T Consensus        87 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~-------~~~~~~Y~~s  159 (239)
T PRK07666         87 ILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKG-------AAVTSAYSAS  159 (239)
T ss_pred             EEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccC-------CCCCcchHHH
Confidence            999999874322   2234556778999999998888887642  145667999999855443       1222345444


Q ss_pred             hhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHH
Q 017977          194 VYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLI  273 (363)
Q Consensus       194 ~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~  273 (363)
                      |.+...|.+      .+..+ . ...|++++++||+.+.++.....           ..+...   ...++..+|+|+++
T Consensus       160 K~a~~~~~~------~~a~e-~-~~~gi~v~~v~pg~v~t~~~~~~-----------~~~~~~---~~~~~~~~~~a~~~  217 (239)
T PRK07666        160 KFGVLGLTE------SLMQE-V-RKHNIRVTALTPSTVATDMAVDL-----------GLTDGN---PDKVMQPEDLAEFI  217 (239)
T ss_pred             HHHHHHHHH------HHHHH-h-hccCcEEEEEecCcccCcchhhc-----------cccccC---CCCCCCHHHHHHHH
Confidence            322211111      11111 1 12489999999999987632110           000011   12468899999999


Q ss_pred             HHHhcCC
Q 017977          274 YEALSNP  280 (363)
Q Consensus       274 ~~~~~~~  280 (363)
                      ..++++.
T Consensus       218 ~~~l~~~  224 (239)
T PRK07666        218 VAQLKLN  224 (239)
T ss_pred             HHHHhCC
Confidence            9999875

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.75  E-value=1.9e-16  Score=137.88  Aligned_cols=217  Identities=18%  Similarity=0.060  Sum_probs=137.4

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc-------CCCEEE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV  121 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~Vi  121 (363)
                      ..++++||||+|+||+++++.|+++|++|++++|+......    ........+|+.+.+++.++++       .+|+||
T Consensus         5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi   80 (252)
T PRK07856          5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPETVD----GRPAEFHAADVRDPDQVAALVDAIVERHGRLDVLV   80 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhhhhc----CCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            34789999999999999999999999999999998754111    1111245689998888877664       469999


Q ss_pred             EccCCCCC---CCCChhhHHHHHHHHHHHHHHHHHHHHhC-C--CCCCCeEEEeccceecCCcccccccCCCcchhhhhh
Q 017977          122 NLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES-P--EGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVY  195 (363)
Q Consensus       122 ~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~--~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~  195 (363)
                      |+||....   .....+..+..+++|+.++..+++++.+. .  .+..++|++||..+..+       .+....|..+|.
T Consensus        81 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~-------~~~~~~Y~~sK~  153 (252)
T PRK07856         81 NNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRP-------SPGTAAYGAAKA  153 (252)
T ss_pred             ECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCC-------CCCCchhHHHHH
Confidence            99986422   12344556788999999999999988652 1  23457999999843222       122344555543


Q ss_pred             hcccchhhHHHHHHHHHHHhc-cCCCceEEEEeeceEEeCCCCcccchHHHHH-HHhCCCCCCCCCccccccHHHHHHHH
Q 017977          196 CLVSFNRGVLVCREWEGTALK-VNKDVRLALIRIGIVLGKDGGALAKMIPLFM-MFAGGPLGSGQQWFSWIHLDDIVNLI  273 (363)
Q Consensus       196 ~~~~y~~~k~~~~~~~~~~~~-~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~D~a~a~  273 (363)
                      +..          .+.+.... ....+.+..++|+.+..+.......-..... .....+.      ..+..++|+|+++
T Consensus       154 a~~----------~l~~~la~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~------~~~~~p~~va~~~  217 (252)
T PRK07856        154 GLL----------NLTRSLAVEWAPKVRVNAVVVGLVRTEQSELHYGDAEGIAAVAATVPL------GRLATPADIAWAC  217 (252)
T ss_pred             HHH----------HHHHHHHHHhcCCeEEEEEEeccccChHHhhhccCHHHHHHHhhcCCC------CCCcCHHHHHHHH
Confidence            222          22111111 1114899999999997763211000001111 1111121      2356799999999


Q ss_pred             HHHhcCCC--CCc-eEEeeCCC
Q 017977          274 YEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       274 ~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      +.++....  ..| .+.+.+|.
T Consensus       218 ~~L~~~~~~~i~G~~i~vdgg~  239 (252)
T PRK07856        218 LFLASDLASYVSGANLEVHGGG  239 (252)
T ss_pred             HHHcCcccCCccCCEEEECCCc
Confidence            99887543  455 66776654

>PRK07985 oxidoreductase; Provisional

Probab=99.74  E-value=2.6e-16  Score=139.87  Aligned_cols=221  Identities=13%  Similarity=0.056  Sum_probs=137.3

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCc--ccccC----CCCCccccCcccccCcchHHhhcc-------C
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK--AELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~--~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (363)
                      .++++||||+|+||+++++.|+++|++|++++|+...  .+.+.    ..........+|+.|.+++.++++       +
T Consensus        49 ~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~  128 (294)
T PRK07985         49 DRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALGG  128 (294)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            3689999999999999999999999999998775432  11111    111112244679998887765543       5


Q ss_pred             CCEEEEccCCCCC----CCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhh
Q 017977          117 STAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCA  192 (363)
Q Consensus       117 ~d~Vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~  192 (363)
                      +|++||+|+....    ...+.+..+..+++|+.++.++++++.+......++|++||..+ +.      ..+....|..
T Consensus       129 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~-~~------~~~~~~~Y~a  201 (294)
T PRK07985        129 LDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQA-YQ------PSPHLLDYAA  201 (294)
T ss_pred             CCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchh-cc------CCCCcchhHH
Confidence            7999999986321    23345667889999999999999998863112257999999833 32      1122234555


Q ss_pred             hhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHH-HHHhCCCCCCCCCccccccHHHHHH
Q 017977          193 KVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVN  271 (363)
Q Consensus       193 ~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~  271 (363)
                      +|.+...+.++       ....+. ..|+++.+++|+.+.++............ ......++      ..+..++|+|+
T Consensus       202 sKaal~~l~~~-------la~el~-~~gIrvn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~------~r~~~pedva~  267 (294)
T PRK07985        202 TKAAILNYSRG-------LAKQVA-EKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPM------KRAGQPAELAP  267 (294)
T ss_pred             HHHHHHHHHHH-------HHHHHh-HhCcEEEEEECCcCccccccccCCCHHHHHHHhccCCC------CCCCCHHHHHH
Confidence            54332222211       111111 23899999999999988421110000111 11111121      13577999999


Q ss_pred             HHHHHhcCCC--CCc-eEEeeCC
Q 017977          272 LIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       272 a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      +++.++....  ..| ++.+.+|
T Consensus       268 ~~~fL~s~~~~~itG~~i~vdgG  290 (294)
T PRK07985        268 VYVYLASQESSYVTAEVHGVCGG  290 (294)
T ss_pred             HHHhhhChhcCCccccEEeeCCC
Confidence            9999987544  344 6666665

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.74  E-value=2.8e-16  Score=137.43  Aligned_cols=222  Identities=16%  Similarity=0.112  Sum_probs=136.7

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhc-------cCCCEEE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI-------QGSTAVV  121 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-------~~~d~Vi  121 (363)
                      ..++|+||||+|+||+++++.|+++|++|++++|+......     .......+|+.|.+++.+++       ..+|+||
T Consensus         8 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi   82 (260)
T PRK06523          8 AGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDDLP-----EGVEFVAADLTTAEGCAAVARAVLERLGGVDILV   82 (260)
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhhcC-----CceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            34799999999999999999999999999999998654221     11124568999888776544       3679999


Q ss_pred             EccCCCCC-----CCCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhhh
Q 017977          122 NLAGTPIG-----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKV  194 (363)
Q Consensus       122 ~~a~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~  194 (363)
                      |+||....     .....+..+..+++|+.++.++.+++...  ..+..++|++||..+..+   .   .+....|..+|
T Consensus        83 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~---~---~~~~~~Y~~sK  156 (260)
T PRK06523         83 HVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLP---L---PESTTAYAAAK  156 (260)
T ss_pred             ECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCC---C---CCCcchhHHHH
Confidence            99985321     12345667788999999988776665432  134567999998832111   0   01223455443


Q ss_pred             hhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc-cch-------HHHH-----HHHhCCCCCCCCCcc
Q 017977          195 YCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL-AKM-------IPLF-----MMFAGGPLGSGQQWF  261 (363)
Q Consensus       195 ~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~-~~~-------~~~~-----~~~~~~~~~~~~~~~  261 (363)
                      .....+.+      . ....+. ..|+++++++|+.+.++..... ..+       ....     ....+.++      .
T Consensus       157 ~a~~~l~~------~-~a~~~~-~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~------~  222 (260)
T PRK06523        157 AALSTYSK------S-LSKEVA-PKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIPL------G  222 (260)
T ss_pred             HHHHHHHH------H-HHHHHh-hcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCcc------C
Confidence            22211111      0 111111 2389999999999988743110 000       0000     00111121      2


Q ss_pred             ccccHHHHHHHHHHHhcCCC--CCc-eEEeeCCCCcC
Q 017977          262 SWIHLDDIVNLIYEALSNPS--YRG-VINGTAPNPVR  295 (363)
Q Consensus       262 ~~i~v~D~a~a~~~~~~~~~--~~g-~~~i~~~~~~s  295 (363)
                      .+..++|+|+++..++....  ..| .+.+.++...+
T Consensus       223 ~~~~~~~va~~~~~l~s~~~~~~~G~~~~vdgg~~~~  259 (260)
T PRK06523        223 RPAEPEEVAELIAFLASDRAASITGTEYVIDGGTVPT  259 (260)
T ss_pred             CCCCHHHHHHHHHHHhCcccccccCceEEecCCccCC
Confidence            25678999999999997543  334 77777765443

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.74  E-value=1.2e-16  Score=139.24  Aligned_cols=223  Identities=14%  Similarity=0.104  Sum_probs=137.3

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcc-cc----cCCCCCccccCcccccCcchHHhhcc-------C
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-EL----IFPGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~----~~~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (363)
                      ..++++||||+|+||++++++|+++|++|++++|+.+.. ..    +...........+|+.|.+++.++++       .
T Consensus         7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   86 (254)
T PRK06114          7 DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGA   86 (254)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            346899999999999999999999999999999976432 11    11111111244579998887776654       4


Q ss_pred             CCEEEEccCCCCC---CCCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchh
Q 017977          117 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYC  191 (363)
Q Consensus       117 ~d~Vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~  191 (363)
                      +|+|||+||....   .....+..+..+++|+.++..+++++.+.  ..+..++|++||.++.++.     ..+..+.|.
T Consensus        87 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-----~~~~~~~Y~  161 (254)
T PRK06114         87 LTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVN-----RGLLQAHYN  161 (254)
T ss_pred             CCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCC-----CCCCcchHH
Confidence            7999999997432   12345567788999999997777765432  1445679999988544331     011123455


Q ss_pred             hhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHH-HHhCCCCCCCCCccccccHHHHH
Q 017977          192 AKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFM-MFAGGPLGSGQQWFSWIHLDDIV  270 (363)
Q Consensus       192 ~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~D~a  270 (363)
                      .+|.+...+.++      +.. .+. ..|+++.+++||.+.++..... ....... .....+++      .+..++|+|
T Consensus       162 ~sKaa~~~l~~~------la~-e~~-~~gi~v~~v~PG~i~t~~~~~~-~~~~~~~~~~~~~p~~------r~~~~~dva  226 (254)
T PRK06114        162 ASKAGVIHLSKS------LAM-EWV-GRGIRVNSISPGYTATPMNTRP-EMVHQTKLFEEQTPMQ------RMAKVDEMV  226 (254)
T ss_pred             HHHHHHHHHHHH------HHH-HHh-hcCeEEEEEeecCccCcccccc-cchHHHHHHHhcCCCC------CCcCHHHHH
Confidence            543322222111      111 111 2389999999999987743211 1111111 11122222      256799999


Q ss_pred             HHHHHHhcCCC--CCc-eEEeeCC
Q 017977          271 NLIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       271 ~a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      ++++.++....  ..| ++.+.+|
T Consensus       227 ~~~~~l~s~~~~~~tG~~i~~dgg  250 (254)
T PRK06114        227 GPAVFLLSDAASFCTGVDLLVDGG  250 (254)
T ss_pred             HHHHHHcCccccCcCCceEEECcC
Confidence            99999987543  344 6666554

>PRK08643 acetoin reductase; Validated

Probab=99.74  E-value=7.9e-17  Score=140.58  Aligned_cols=222  Identities=15%  Similarity=0.081  Sum_probs=135.9

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCC----CCCccccCcccccCcchHHhhcc-------CCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GST  118 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~d  118 (363)
                      +++++||||+|+||+++++.|+++|++|++++|+.........    .........+|+.+.+++.++++       ++|
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   81 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN   81 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            3689999999999999999999999999999998754332211    11112244689999887776654       589


Q ss_pred             EEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CC-CCCCeEEEeccceecCCcccccccCCCcchhh
Q 017977          119 AVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PE-GVRPSVLELVKPKYLMRAAHQEMITWLSDYCA  192 (363)
Q Consensus       119 ~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~-~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~  192 (363)
                      +|||+||.....   ....+..+..+++|+.++..+++++.+.  .. ...++|++||..+.++       .+....|..
T Consensus        82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-------~~~~~~Y~~  154 (256)
T PRK08643         82 VVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVG-------NPELAVYSS  154 (256)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccC-------CCCCchhHH
Confidence            999999864322   1234556778999999988777776642  11 2346899999855444       122334555


Q ss_pred             hhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccc-------hHHH--HHHHhCCCCCCCCCcccc
Q 017977          193 KVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAK-------MIPL--FMMFAGGPLGSGQQWFSW  263 (363)
Q Consensus       193 ~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~-------~~~~--~~~~~~~~~~~~~~~~~~  263 (363)
                      +|.....+.+       .....+ ...|++++.++|+.+.++.......       ....  ....... +    ....+
T Consensus       155 sK~a~~~~~~-------~la~e~-~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~  221 (256)
T PRK08643        155 TKFAVRGLTQ-------TAARDL-ASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKD-I----TLGRL  221 (256)
T ss_pred             HHHHHHHHHH-------HHHHHh-cccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhcc-C----CCCCC
Confidence            5432222221       111111 1248999999999998763211000       0000  0001110 0    11136


Q ss_pred             ccHHHHHHHHHHHhcCCC--CCc-eEEeeCC
Q 017977          264 IHLDDIVNLIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       264 i~v~D~a~a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      ...+|+|+++..++....  ..| .+.+.++
T Consensus       222 ~~~~~va~~~~~L~~~~~~~~~G~~i~vdgg  252 (256)
T PRK08643        222 SEPEDVANCVSFLAGPDSDYITGQTIIVDGG  252 (256)
T ss_pred             cCHHHHHHHHHHHhCccccCccCcEEEeCCC
Confidence            789999999999886543  455 5555554

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.74  E-value=8.3e-17  Score=138.77  Aligned_cols=212  Identities=14%  Similarity=0.103  Sum_probs=135.0

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCC---CccccCcccccCcchHHhhcc-------CCCE
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK---KTRFFPGVMIAEEPQWRDCIQ-------GSTA  119 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~~-------~~d~  119 (363)
                      +++|+||||+|++|++++++|+++|++|++++|++.+........   .......+|+.+.+++.+.++       ++|+
T Consensus         6 ~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   85 (237)
T PRK07326          6 GKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLDV   85 (237)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            368999999999999999999999999999999875543321110   112234578888887776654       6899


Q ss_pred             EEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC-CCCCCCeEEEeccceecCCcccccccCCCcchhhhhh
Q 017977          120 VVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVY  195 (363)
Q Consensus       120 Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~  195 (363)
                      |||+++.....   ....+..+..+++|+.++.++++++.+. ..+.+++|++||..+..+       ......|..+  
T Consensus        86 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~-------~~~~~~y~~s--  156 (237)
T PRK07326         86 LIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNF-------FAGGAAYNAS--  156 (237)
T ss_pred             EEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccC-------CCCCchHHHH--
Confidence            99999864321   1234455678999999999998887642 124467999998732111       1112234443  


Q ss_pred             hcccchhhHHHHHHHHHHHh--ccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHH
Q 017977          196 CLVSFNRGVLVCREWEGTAL--KVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLI  273 (363)
Q Consensus       196 ~~~~y~~~k~~~~~~~~~~~--~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~  273 (363)
                              |+..........  ....|++++++||+.+.++.......                ......+..+|+++++
T Consensus       157 --------k~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~~~----------------~~~~~~~~~~d~a~~~  212 (237)
T PRK07326        157 --------KFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHTPS----------------EKDAWKIQPEDIAQLV  212 (237)
T ss_pred             --------HHHHHHHHHHHHHHhcccCcEEEEEeeccccCcccccccc----------------hhhhccCCHHHHHHHH
Confidence                    322111111111  12248999999999987653211100                0000147899999999


Q ss_pred             HHHhcCCC--CCceEEeeCCCCc
Q 017977          274 YEALSNPS--YRGVINGTAPNPV  294 (363)
Q Consensus       274 ~~~~~~~~--~~g~~~i~~~~~~  294 (363)
                      +.++..+.  ..+.+.+..+.+.
T Consensus       213 ~~~l~~~~~~~~~~~~~~~~~~~  235 (237)
T PRK07326        213 LDLLKMPPRTLPSKIEVRPSRPP  235 (237)
T ss_pred             HHHHhCCccccccceEEecCCCC
Confidence            99998765  3346666555443

>PRK06398 aldose dehydrogenase; Validated

Probab=99.74  E-value=1.9e-16  Score=138.30  Aligned_cols=214  Identities=11%  Similarity=-0.004  Sum_probs=136.1

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc-------CCCEEE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV  121 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~Vi  121 (363)
                      .++++|||||+|+||+++++.|+++|++|++++|+......       .....+|+.|.+++.++++       ++|+||
T Consensus         5 ~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~~-------~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li   77 (258)
T PRK06398          5 KDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYND-------VDYFKVDVSNKEQVIKGIDYVISKYGRIDILV   77 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccCc-------eEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            34799999999999999999999999999999998654321       1245689999888776654       589999


Q ss_pred             EccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhhhhh
Q 017977          122 NLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYC  196 (363)
Q Consensus       122 ~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~  196 (363)
                      |+||.....   ....+..+..+++|+.++..+++++.+.  ..+..++|++||..+..+       .+....|..+|.+
T Consensus        78 ~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-------~~~~~~Y~~sKaa  150 (258)
T PRK06398         78 NNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAV-------TRNAAAYVTSKHA  150 (258)
T ss_pred             ECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccC-------CCCCchhhhhHHH
Confidence            999974322   2244556778999999999888887642  134567999999843111       2233455554322


Q ss_pred             cccchhhHHHHHHHHHHH-hccCCCceEEEEeeceEEeCCCCcc---------cchHHHHHH-HhCCCCCCCCCcccccc
Q 017977          197 LVSFNRGVLVCREWEGTA-LKVNKDVRLALIRIGIVLGKDGGAL---------AKMIPLFMM-FAGGPLGSGQQWFSWIH  265 (363)
Q Consensus       197 ~~~y~~~k~~~~~~~~~~-~~~~~~~~~~ilRp~~v~g~~~~~~---------~~~~~~~~~-~~~~~~~~~~~~~~~i~  265 (363)
                      .          ....... .+...++.++.++||.+..+.....         ......... ....+      ...+..
T Consensus       151 l----------~~~~~~la~e~~~~i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~  214 (258)
T PRK06398        151 V----------LGLTRSIAVDYAPTIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMHP------MKRVGK  214 (258)
T ss_pred             H----------HHHHHHHHHHhCCCCEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhhhcCC------cCCCcC
Confidence            2          2221111 1111259999999998876521110         000000110 11111      123678


Q ss_pred             HHHHHHHHHHHhcCCC--CCc-eEEeeCCC
Q 017977          266 LDDIVNLIYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       266 v~D~a~a~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      ++|+|++++.++....  ..| .+.+.++.
T Consensus       215 p~eva~~~~~l~s~~~~~~~G~~i~~dgg~  244 (258)
T PRK06398        215 PEEVAYVVAFLASDLASFITGECVTVDGGL  244 (258)
T ss_pred             HHHHHHHHHHHcCcccCCCCCcEEEECCcc
Confidence            9999999999887543  344 66666553

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=99.74  E-value=9.6e-17  Score=129.82  Aligned_cols=286  Identities=12%  Similarity=0.088  Sum_probs=185.6

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhC-CC-EEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc--CCCEEEEccC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQAD-NH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAG  125 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~-g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~Vi~~a~  125 (363)
                      ..+|||||+-|.+|..+++.|..+ |- .|+.-+... +.+.....+.   ++-.|+.|...+++++-  .+|.+||..+
T Consensus        44 ~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~K-Pp~~V~~~GP---yIy~DILD~K~L~eIVVn~RIdWL~HfSA  119 (366)
T KOG2774|consen   44 APRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVK-PPANVTDVGP---YIYLDILDQKSLEEIVVNKRIDWLVHFSA  119 (366)
T ss_pred             CCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccC-CchhhcccCC---chhhhhhccccHHHhhcccccceeeeHHH
Confidence            358999999999999999999764 64 455544333 2333333333   66689999999999875  5899999877


Q ss_pred             CCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhcccchhhHH
Q 017977          126 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRGVL  205 (363)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~~y~~~k~  205 (363)
                      ...  ...+.+-....++|+.|..|+++.+.+  ...+ +...|+. +.||........|   +.... -.+.-|+.+| 
T Consensus       120 LLS--AvGE~NVpLA~~VNI~GvHNil~vAa~--~kL~-iFVPSTI-GAFGPtSPRNPTP---dltIQ-RPRTIYGVSK-  188 (366)
T KOG2774|consen  120 LLS--AVGETNVPLALQVNIRGVHNILQVAAK--HKLK-VFVPSTI-GAFGPTSPRNPTP---DLTIQ-RPRTIYGVSK-  188 (366)
T ss_pred             HHH--HhcccCCceeeeecchhhhHHHHHHHH--cCee-Eeecccc-cccCCCCCCCCCC---Ceeee-cCceeechhH-
Confidence            532  223444556778999999999999999  6665 4445555 7788211111111   11000 0122344444 


Q ss_pred             HHHHHHHHHhccCCCceEEEEeeceEEeC---CCCcccchHHHH-HHH-hCCC--CCCCCCccccccHHHHHHHHHHHhc
Q 017977          206 VCREWEGTALKVNKDVRLALIRIGIVLGK---DGGALAKMIPLF-MMF-AGGP--LGSGQQWFSWIHLDDIVNLIYEALS  278 (363)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~ilRp~~v~g~---~~~~~~~~~~~~-~~~-~~~~--~~~~~~~~~~i~v~D~a~a~~~~~~  278 (363)
                      +.++...+.+...+|+++-++|.+.++..   +++.....+..+ .+. +|+.  .-.++.+..+.+.+|+-++++.++.
T Consensus       189 VHAEL~GEy~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCylrpdtrlpmmy~~dc~~~~~~~~~  268 (366)
T KOG2774|consen  189 VHAELLGEYFNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYLRPDTRLPMMYDTDCMASVIQLLA  268 (366)
T ss_pred             HHHHHHHHHHHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcccccCCCccCceeehHHHHHHHHHHHh
Confidence            77888888777777999999999988864   444444444444 222 3332  3567888899999999999999887


Q ss_pred             CCC---CCceEEeeCCCCcCHHHHHHHHHHHhCC-CCCC-CCcHHHHHHHhccCceeeecCcccChhhHH-HcCCCcccc
Q 017977          279 NPS---YRGVINGTAPNPVRLAEMCDHLGNVLGR-PSWL-PVPEFALKAVLGEGAFVVLEGQRVVPARAK-ELGFPFKYR  352 (363)
Q Consensus       279 ~~~---~~g~~~i~~~~~~s~~el~~~i~~~~g~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~lG~~p~~~  352 (363)
                      .+.   ...+||+++ ..++..|+++.+.+...- +..+ +...-.    ..+.     ..+.++.+.++ ++.|+.++.
T Consensus       269 a~~~~lkrr~ynvt~-~sftpee~~~~~~~~~p~~~i~y~~~srq~----iad~-----wp~~~dds~ar~~wh~~h~~~  338 (366)
T KOG2774|consen  269 ADSQSLKRRTYNVTG-FSFTPEEIADAIRRVMPGFEIDYDICTRQS----IADS-----WPMSLDDSEARTEWHEKHSLH  338 (366)
T ss_pred             CCHHHhhhheeeece-eccCHHHHHHHHHhhCCCceeecccchhhh----hhhh-----cccccCchhHhhHHHHhhhhh
Confidence            665   234999988 568999999999988743 2111 111111    1111     23344556664 689998886


Q ss_pred             cHHHHHHHH
Q 017977          353 YVKDALKAI  361 (363)
Q Consensus       353 ~~~~~l~~~  361 (363)
                       +-..+.-+
T Consensus       339 -l~~~i~~~  346 (366)
T KOG2774|consen  339 -LLSIISTV  346 (366)
T ss_pred             -HHHHHHHH
Confidence             66655433

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.74  E-value=1.4e-16  Score=138.26  Aligned_cols=220  Identities=13%  Similarity=0.043  Sum_probs=136.4

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcc--cccCCCCCccccCcccccCcchHHhhcc-------CCCE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA--ELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTA  119 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~  119 (363)
                      .+++|+||||+|+||++++++|+++|++|++++|+....  ..+...........+|+.+.+++..+++       ++|+
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   83 (248)
T TIGR01832         4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHIDI   83 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            347899999999999999999999999999999975321  1111111112245689999888775553       5899


Q ss_pred             EEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCC-CCCeEEEeccceecCCcccccccCCCcchhhh
Q 017977          120 VVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLELVKPKYLMRAAHQEMITWLSDYCAK  193 (363)
Q Consensus       120 Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~-~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~  193 (363)
                      |||+||.....   ....+..+..+++|+.++.++++++.+.  ..+ ..++|++||. ..+..      .+..+.|..+
T Consensus        84 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~-~~~~~------~~~~~~Y~~s  156 (248)
T TIGR01832        84 LVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASM-LSFQG------GIRVPSYTAS  156 (248)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecH-HhccC------CCCCchhHHH
Confidence            99999974321   2234566778999999999999888642  122 4579999988 33321      1223345554


Q ss_pred             hhhcccchhhHHHHHHHHHHHhc--cCCCceEEEEeeceEEeCCCCcccchHHHH-HHHhCCCCCCCCCccccccHHHHH
Q 017977          194 VYCLVSFNRGVLVCREWEGTALK--VNKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIV  270 (363)
Q Consensus       194 ~~~~~~y~~~k~~~~~~~~~~~~--~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a  270 (363)
                      |.+          ...+.+....  ...|+++++++||.+..+.......-.... ......+      ...++.++|+|
T Consensus       157 Kaa----------~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~dva  220 (248)
T TIGR01832       157 KHG----------VAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRADEDRNAAILERIP------AGRWGTPDDIG  220 (248)
T ss_pred             HHH----------HHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccChHHHHHHHhcCC------CCCCcCHHHHH
Confidence            322          2222111111  123899999999999877432110000000 1111111      23589999999


Q ss_pred             HHHHHHhcCCC--CCceEEeeCC
Q 017977          271 NLIYEALSNPS--YRGVINGTAP  291 (363)
Q Consensus       271 ~a~~~~~~~~~--~~g~~~i~~~  291 (363)
                      +++..++....  ..|.+...++
T Consensus       221 ~~~~~l~s~~~~~~~G~~i~~dg  243 (248)
T TIGR01832       221 GPAVFLASSASDYVNGYTLAVDG  243 (248)
T ss_pred             HHHHHHcCccccCcCCcEEEeCC
Confidence            99999997543  3454444443

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.74  E-value=1.3e-16  Score=138.15  Aligned_cols=222  Identities=16%  Similarity=0.131  Sum_probs=138.9

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCC-CCccccCcccccCcchHHhhc-------cCCCEE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCI-------QGSTAV  120 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~-------~~~d~V  120 (363)
                      ++++++||||+|+||+++++.|+++|+.|++.+|+..+.+.+... ........+|+.+.+++.+++       .++|+|
T Consensus         5 ~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   84 (245)
T PRK12936          5 SGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDIL   84 (245)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            346999999999999999999999999999988877554432211 111224457898888877654       358999


Q ss_pred             EEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhhhh
Q 017977          121 VNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVY  195 (363)
Q Consensus       121 i~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~  195 (363)
                      ||+|+.....   ....+..+..+++|+.++.++++++.+.  ..+.+++|++||..+.++       .+....|..+|.
T Consensus        85 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-------~~~~~~Y~~sk~  157 (245)
T PRK12936         85 VNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTG-------NPGQANYCASKA  157 (245)
T ss_pred             EECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcC-------CCCCcchHHHHH
Confidence            9999974321   2244566788999999998888876531  135567999999755554       222334555543


Q ss_pred             hcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHHHH
Q 017977          196 CLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE  275 (363)
Q Consensus       196 ~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~  275 (363)
                      +...+.+      .+ ..... ..++++++++|+.+..+..........  ..... .    .....+...+|+++++..
T Consensus       158 a~~~~~~------~l-a~~~~-~~~i~v~~i~pg~~~t~~~~~~~~~~~--~~~~~-~----~~~~~~~~~~~ia~~~~~  222 (245)
T PRK12936        158 GMIGFSK------SL-AQEIA-TRNVTVNCVAPGFIESAMTGKLNDKQK--EAIMG-A----IPMKRMGTGAEVASAVAY  222 (245)
T ss_pred             HHHHHHH------HH-HHHhh-HhCeEEEEEEECcCcCchhcccChHHH--HHHhc-C----CCCCCCcCHHHHHHHHHH
Confidence            2211111      11 11111 138999999999876543221111100  11111 0    111236679999999998


Q ss_pred             HhcCCC--CCc-eEEeeCCC
Q 017977          276 ALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       276 ~~~~~~--~~g-~~~i~~~~  292 (363)
                      ++....  ..| .+++.++.
T Consensus       223 l~~~~~~~~~G~~~~~~~g~  242 (245)
T PRK12936        223 LASSEAAYVTGQTIHVNGGM  242 (245)
T ss_pred             HcCccccCcCCCEEEECCCc
Confidence            886543  245 78877763

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.74  E-value=4.6e-17  Score=141.38  Aligned_cols=206  Identities=15%  Similarity=0.094  Sum_probs=130.0

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCC-CCccccCcccccCcchHHhhcc-------CCCEEEE
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTAVVN  122 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~d~Vi~  122 (363)
                      |+|+||||+|+||.++++.|+++|++|++++|++.+...+... ........+|+.|.+++.++++       ++|+|||
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~   80 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVN   80 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            6899999999999999999999999999999987654332211 1112244679998887776554       6899999


Q ss_pred             ccCCCCC----CCCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhhhhh
Q 017977          123 LAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYC  196 (363)
Q Consensus       123 ~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~  196 (363)
                      +||....    ...+.+..+..+++|+.++..+++++.+.  ..+.+++|++||.++..+       .+....|..+   
T Consensus        81 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-------~~~~~~Y~~s---  150 (248)
T PRK10538         81 NAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWP-------YAGGNVYGAT---  150 (248)
T ss_pred             CCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCC-------CCCCchhHHH---
Confidence            9986321    12345566788999999966666655431  156678999999843221       1222345444   


Q ss_pred             cccchhhHHHHHHHHHHHhc--cCCCceEEEEeeceEEeCCCCc--ccchHHHHHHHhCCCCCCCCCccccccHHHHHHH
Q 017977          197 LVSFNRGVLVCREWEGTALK--VNKDVRLALIRIGIVLGKDGGA--LAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL  272 (363)
Q Consensus       197 ~~~y~~~k~~~~~~~~~~~~--~~~~~~~~ilRp~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a  272 (363)
                             |............  ...++.+.+++||.+.|+....  .........    .. ..   ...++..+|+|++
T Consensus       151 -------K~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~~~~~----~~-~~---~~~~~~~~dvA~~  215 (248)
T PRK10538        151 -------KAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAE----KT-YQ---NTVALTPEDVSEA  215 (248)
T ss_pred             -------HHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccccchhhccCcHHHHH----hh-cc---ccCCCCHHHHHHH
Confidence                   3222222222211  1238999999999998664311  000000000    00 00   1135789999999


Q ss_pred             HHHHhcCCC
Q 017977          273 IYEALSNPS  281 (363)
Q Consensus       273 ~~~~~~~~~  281 (363)
                      ++.++..+.
T Consensus       216 ~~~l~~~~~  224 (248)
T PRK10538        216 VWWVATLPA  224 (248)
T ss_pred             HHHHhcCCC
Confidence            999997654

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.74  E-value=1e-16  Score=140.30  Aligned_cols=224  Identities=13%  Similarity=0.065  Sum_probs=140.2

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCC-CCccccCcccccCcchHHhhcc-------CCCEE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTAV  120 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~d~V  120 (363)
                      ++++++||||+|+||+++++.|+++|++|++++|+....+..... ........+|+.|.+++.++++       .+|++
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l   84 (261)
T PRK08265          5 AGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDIL   84 (261)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            347999999999999999999999999999999987654332211 1112245689999988876664       57999


Q ss_pred             EEccCCCCC--CCCChhhHHHHHHHHHHHHHHHHHHHHhC-CCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhc
Q 017977          121 VNLAGTPIG--TRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCL  197 (363)
Q Consensus       121 i~~a~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~  197 (363)
                      ||+||....  .....+..+..+++|+.++..+++++... ..+..++|++||.++.++       .+....|..+|...
T Consensus        85 v~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~-------~~~~~~Y~asKaa~  157 (261)
T PRK08265         85 VNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFA-------QTGRWLYPASKAAI  157 (261)
T ss_pred             EECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccC-------CCCCchhHHHHHHH
Confidence            999986322  12345567788999999999998887653 123357999999855443       22233555554332


Q ss_pred             ccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccc-hHHHHHHHhCCCCCCCCCccccccHHHHHHHHHHH
Q 017977          198 VSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAK-MIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEA  276 (363)
Q Consensus       198 ~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~  276 (363)
                      ..+.++      ...+ + ...|+++++++|+.+..+....... -........ ...   .....+...+|+|+++..+
T Consensus       158 ~~~~~~------la~e-~-~~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~-~~~---~p~~r~~~p~dva~~~~~l  225 (261)
T PRK08265        158 RQLTRS------MAMD-L-APDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVA-APF---HLLGRVGDPEEVAQVVAFL  225 (261)
T ss_pred             HHHHHH------HHHH-h-cccCEEEEEEccCCccChhhhhhcccchhHHHHhh-ccc---CCCCCccCHHHHHHHHHHH
Confidence            222211      0111 1 1238999999999887653211000 000000000 000   0111356799999999999


Q ss_pred             hcCCC--CCc-eEEeeCC
Q 017977          277 LSNPS--YRG-VINGTAP  291 (363)
Q Consensus       277 ~~~~~--~~g-~~~i~~~  291 (363)
                      +....  ..| .+.+.++
T Consensus       226 ~s~~~~~~tG~~i~vdgg  243 (261)
T PRK08265        226 CSDAASFVTGADYAVDGG  243 (261)
T ss_pred             cCccccCccCcEEEECCC
Confidence            97543  344 6666665

>PRK08324 short chain dehydrogenase; Validated

Probab=99.74  E-value=7.8e-17  Score=158.71  Aligned_cols=227  Identities=17%  Similarity=0.070  Sum_probs=144.8

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCC---CccccCcccccCcchHHhhcc-------CCC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK---KTRFFPGVMIAEEPQWRDCIQ-------GST  118 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~~-------~~d  118 (363)
                      .+++|+||||+|+||+++++.|+++|++|++++|+...........   .......+|+.|.+++.++++       ++|
T Consensus       421 ~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iD  500 (681)
T PRK08324        421 AGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVD  500 (681)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            4579999999999999999999999999999999876543321110   112244679999888876664       689


Q ss_pred             EEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCC-CCeEEEeccceecCCcccccccCCCcchhh
Q 017977          119 AVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGV-RPSVLELVKPKYLMRAAHQEMITWLSDYCA  192 (363)
Q Consensus       119 ~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~-~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~  192 (363)
                      +|||+||.....   ..+.+..+..+++|+.++.++++++.+.  ..+. .++|++||..+.++       .+....|..
T Consensus       501 vvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~-------~~~~~~Y~a  573 (681)
T PRK08324        501 IVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNP-------GPNFGAYGA  573 (681)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCC-------CCCcHHHHH
Confidence            999999964332   2344566788999999999997777643  1333 67999999844333       122234444


Q ss_pred             hhhhcccchhhHHHHHHHHHHHhcc--CCCceEEEEeeceEE-eCCCCcccchHHHHHHHhCCC-------CCCCCCccc
Q 017977          193 KVYCLVSFNRGVLVCREWEGTALKV--NKDVRLALIRIGIVL-GKDGGALAKMIPLFMMFAGGP-------LGSGQQWFS  262 (363)
Q Consensus       193 ~~~~~~~y~~~k~~~~~~~~~~~~~--~~~~~~~ilRp~~v~-g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~  262 (363)
                      +          |.....+.......  ..|+++++++|+.+| +..... ..+........+..       ...+.....
T Consensus       574 s----------Kaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~  642 (681)
T PRK08324        574 A----------KAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWT-GEWIEARAAAYGLSEEELEEFYRARNLLKR  642 (681)
T ss_pred             H----------HHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCcccc-chhhhhhhhhccCChHHHHHHHHhcCCcCC
Confidence            4          43333332222211  237999999999998 543211 01110000001110       123344567


Q ss_pred             cccHHHHHHHHHHHhc--CCCCCc-eEEeeCCCC
Q 017977          263 WIHLDDIVNLIYEALS--NPSYRG-VINGTAPNP  293 (363)
Q Consensus       263 ~i~v~D~a~a~~~~~~--~~~~~g-~~~i~~~~~  293 (363)
                      +++++|+|+++..++.  .....| ++++.+|..
T Consensus       643 ~v~~~DvA~a~~~l~s~~~~~~tG~~i~vdgG~~  676 (681)
T PRK08324        643 EVTPEDVAEAVVFLASGLLSKTTGAIITVDGGNA  676 (681)
T ss_pred             ccCHHHHHHHHHHHhCccccCCcCCEEEECCCch
Confidence            8999999999999884  233344 899988754

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.74  E-value=9.3e-17  Score=141.27  Aligned_cols=209  Identities=16%  Similarity=0.105  Sum_probs=129.9

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccC----CCCCccccCcccccCcchHHhhcc-------CCCE
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GSTA  119 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~  119 (363)
                      |+|+||||+|+||+++++.|+++|++|++++|+..+.+...    ..........+|+.|.+++.++++       ++|+
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~   80 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV   80 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            47999999999999999999999999999999876543221    111122245679988887776654       6899


Q ss_pred             EEEccCCCCCCC---CChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhhh
Q 017977          120 VVNLAGTPIGTR---WSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKV  194 (363)
Q Consensus       120 Vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~  194 (363)
                      |||+||......   ...+..+..+++|+.++.++.+++...  ..+..++|++||..+..+       .+..+.|..+|
T Consensus        81 lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~-------~~~~~~Y~~sK  153 (270)
T PRK05650         81 IVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQ-------GPAMSSYNVAK  153 (270)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCC-------CCCchHHHHHH
Confidence            999999743322   233455668899998887766665321  145678999998843222       12233454443


Q ss_pred             hhcccchhhHHHHHHHHHHHhcc-CCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHH
Q 017977          195 YCLVSFNRGVLVCREWEGTALKV-NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLI  273 (363)
Q Consensus       195 ~~~~~y~~~k~~~~~~~~~~~~~-~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~  273 (363)
                      .+...|.         +...... ..|+++++++|+.+.++.........+.........     ....+++++|+|+++
T Consensus       154 aa~~~~~---------~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~vA~~i  219 (270)
T PRK05650        154 AGVVALS---------ETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQVGKL-----LEKSPITAADIADYI  219 (270)
T ss_pred             HHHHHHH---------HHHHHHhcccCcEEEEEecCccccCcccccccCchhHHHHHHHH-----hhcCCCCHHHHHHHH
Confidence            2211111         1111111 238999999999998774322111111110000000     012358899999999


Q ss_pred             HHHhcCC
Q 017977          274 YEALSNP  280 (363)
Q Consensus       274 ~~~~~~~  280 (363)
                      +.++++.
T Consensus       220 ~~~l~~~  226 (270)
T PRK05650        220 YQQVAKG  226 (270)
T ss_pred             HHHHhCC
Confidence            9999864

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.74  E-value=1.7e-16  Score=137.81  Aligned_cols=217  Identities=16%  Similarity=0.046  Sum_probs=133.8

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCC-cccc----cCCCCCccccCcccccCcchHHhhcc-------CCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS-KAEL----IFPGKKTRFFPGVMIAEEPQWRDCIQ-------GST  118 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~----~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d  118 (363)
                      ++++||||+|+||++++++|+++|++|+...++.. ....    +...........+|+.|.+++.++++       .+|
T Consensus         3 ~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   82 (248)
T PRK06123          3 KVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRLD   82 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCCC
Confidence            47999999999999999999999999887765432 2111    11111112245689999888877665       579


Q ss_pred             EEEEccCCCCCC----CCChhhHHHHHHHHHHHHHHHHHHHHhC-C-CC---CCCeEEEeccceecCCcccccccCC-Cc
Q 017977          119 AVVNLAGTPIGT----RWSSEIKKEIKESRIRVTSKVVDLINES-P-EG---VRPSVLELVKPKYLMRAAHQEMITW-LS  188 (363)
Q Consensus       119 ~Vi~~a~~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~~---~~~~v~~SS~~~~yg~~~~~e~~~~-~~  188 (363)
                      +|||+|+.....    ....+.....+++|+.++.++++++.+. . ..   ..++|++||.++.++       .+. ..
T Consensus        83 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-------~~~~~~  155 (248)
T PRK06123         83 ALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLG-------SPGEYI  155 (248)
T ss_pred             EEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCC-------CCCCcc
Confidence            999999874321    1234456688999999999988887652 0 11   235899999855554       111 12


Q ss_pred             chhhhhhhcccchhhHHHHHHHHHHHhc--cCCCceEEEEeeceEEeCCCCcccchHHHHHHHh-CCCCCCCCCcccccc
Q 017977          189 DYCAKVYCLVSFNRGVLVCREWEGTALK--VNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFA-GGPLGSGQQWFSWIH  265 (363)
Q Consensus       189 ~~~~~~~~~~~y~~~k~~~~~~~~~~~~--~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~  265 (363)
                      .|..+          |.....+......  ...+++++++||+.++++...... ......... ..++.      -+.+
T Consensus       156 ~Y~~s----------Kaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~-~~~~~~~~~~~~p~~------~~~~  218 (248)
T PRK06123        156 DYAAS----------KGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGG-EPGRVDRVKAGIPMG------RGGT  218 (248)
T ss_pred             chHHH----------HHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccC-CHHHHHHHHhcCCCC------CCcC
Confidence            35444          3222222211111  123899999999999998432110 011111111 12221      1357


Q ss_pred             HHHHHHHHHHHhcCCC--CCc-eEEeeCC
Q 017977          266 LDDIVNLIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       266 v~D~a~a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      ++|+++++..++....  ..| .|++.++
T Consensus       219 ~~d~a~~~~~l~~~~~~~~~g~~~~~~gg  247 (248)
T PRK06123        219 AEEVARAILWLLSDEASYTTGTFIDVSGG  247 (248)
T ss_pred             HHHHHHHHHHHhCccccCccCCEEeecCC
Confidence            8999999999887543  334 7887664

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.73  E-value=3.7e-16  Score=134.58  Aligned_cols=217  Identities=15%  Similarity=0.072  Sum_probs=134.7

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCc-chHHhhccCCCEEEEccCCC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEE-PQWRDCIQGSTAVVNLAGTP  127 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~d~Vi~~a~~~  127 (363)
                      +.++++||||+|+||+++++.|+++|++|++++|+......  .   ......+|+.+. +.+.+.+..+|+|||+|+..
T Consensus         4 ~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~--~---~~~~~~~D~~~~~~~~~~~~~~id~lv~~ag~~   78 (235)
T PRK06550          4 MTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDLS--G---NFHFLQLDLSDDLEPLFDWVPSVDILCNTAGIL   78 (235)
T ss_pred             CCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccccC--C---cEEEEECChHHHHHHHHHhhCCCCEEEECCCCC
Confidence            34689999999999999999999999999999998644211  1   111345677776 44444556789999999853


Q ss_pred             CC----CCCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhcccch
Q 017977          128 IG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVSFN  201 (363)
Q Consensus       128 ~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~~y~  201 (363)
                      ..    .....+..+..+++|+.++.++++++...  ..+..++|++||..+.++       .+....|..+|.+...|.
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-------~~~~~~Y~~sK~a~~~~~  151 (235)
T PRK06550         79 DDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVA-------GGGGAAYTASKHALAGFT  151 (235)
T ss_pred             CCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccC-------CCCCcccHHHHHHHHHHH
Confidence            11    23345567788999999999998888642  134457999998854332       122234555443222221


Q ss_pred             hhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHH-HHhCCCCCCCCCccccccHHHHHHHHHHHhcCC
Q 017977          202 RGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFM-MFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNP  280 (363)
Q Consensus       202 ~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~  280 (363)
                      ++       ....+. ..|+++++++|+.+.++.......-..... .....+      ...+...+|+|++++.++...
T Consensus       152 ~~-------la~~~~-~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~a~~~~~l~s~~  217 (235)
T PRK06550        152 KQ-------LALDYA-KDGIQVFGIAPGAVKTPMTAADFEPGGLADWVARETP------IKRWAEPEEVAELTLFLASGK  217 (235)
T ss_pred             HH-------HHHHhh-hcCeEEEEEeeCCccCcccccccCchHHHHHHhccCC------cCCCCCHHHHHHHHHHHcChh
Confidence            11       111111 238999999999998774321000000001 111112      123678999999999999654


Q ss_pred             C--CCc-eEEeeCC
Q 017977          281 S--YRG-VINGTAP  291 (363)
Q Consensus       281 ~--~~g-~~~i~~~  291 (363)
                      .  ..| ++.+.++
T Consensus       218 ~~~~~g~~~~~~gg  231 (235)
T PRK06550        218 ADYMQGTIVPIDGG  231 (235)
T ss_pred             hccCCCcEEEECCc
Confidence            3  344 5555554

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.73  E-value=3.3e-16  Score=135.73  Aligned_cols=218  Identities=17%  Similarity=0.061  Sum_probs=135.0

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcc-c----ccCCCCCccccCcccccCcchHHhhcc-------C
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-E----LIFPGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~----~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (363)
                      +.++|+||||+|+||+++++.|+++|++|+++.|+..+. .    .+...........+|+.+.+++.++++       +
T Consensus         4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (245)
T PRK12937          4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGR   83 (245)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            346899999999999999999999999998888765321 1    111111112244679999888877765       6


Q ss_pred             CCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhhh
Q 017977          117 STAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAK  193 (363)
Q Consensus       117 ~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~  193 (363)
                      +|+|||+||.....   ....+..+..+++|+.++.++++++.+......++|++||.+...+       .+....|..+
T Consensus        84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~-------~~~~~~Y~~s  156 (245)
T PRK12937         84 IDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALP-------LPGYGPYAAS  156 (245)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCC-------CCCCchhHHH
Confidence            89999999974321   2234556778999999999999888763112357999988733111       2223345444


Q ss_pred             hhhcccchhhHHHHHHHHHHHhc--cCCCceEEEEeeceEEeCCC--CcccchHHHHHHHhCCCCCCCCCccccccHHHH
Q 017977          194 VYCLVSFNRGVLVCREWEGTALK--VNKDVRLALIRIGIVLGKDG--GALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDI  269 (363)
Q Consensus       194 ~~~~~~y~~~k~~~~~~~~~~~~--~~~~~~~~ilRp~~v~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  269 (363)
                      |.          ....+......  ...++.+++++|+.+.++..  ........  ......++      ..+.+++|+
T Consensus       157 K~----------a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~--~~~~~~~~------~~~~~~~d~  218 (245)
T PRK12937        157 KA----------AVEGLVHVLANELRGRGITVNAVAPGPVATELFFNGKSAEQID--QLAGLAPL------ERLGTPEEI  218 (245)
T ss_pred             HH----------HHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccCCHHHHH--HHHhcCCC------CCCCCHHHH
Confidence            32          22222211111  12389999999998876531  11111111  11111121      125678999


Q ss_pred             HHHHHHHhcCCC--CCc-eEEeeCC
Q 017977          270 VNLIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       270 a~a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      |+++..++..+.  ..| .+++.++
T Consensus       219 a~~~~~l~~~~~~~~~g~~~~~~~g  243 (245)
T PRK12937        219 AAAVAFLAGPDGAWVNGQVLRVNGG  243 (245)
T ss_pred             HHHHHHHcCccccCccccEEEeCCC
Confidence            999999887644  334 6666543

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.73  E-value=1.6e-16  Score=137.85  Aligned_cols=221  Identities=13%  Similarity=0.049  Sum_probs=138.6

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEE-eCCCCcccccCC----CCCccccCcccccCcchHHhhcc-------C
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVL-TRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (363)
                      ++++|+||||+|+||+++++.|+++|++|+++ +|+.........    .........+|+.+.+++.++++       +
T Consensus         4 ~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (247)
T PRK05565          4 MGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGK   83 (247)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            34689999999999999999999999999999 887654322211    11112245679998888776664       6


Q ss_pred             CCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchh
Q 017977          117 STAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYC  191 (363)
Q Consensus       117 ~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~  191 (363)
                      +|+|||++|.....   ....+..+..+++|+.++.++++++...  ..+.+++|++||.+..++       .+....|.
T Consensus        84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~-------~~~~~~y~  156 (247)
T PRK05565         84 IDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIG-------ASCEVLYS  156 (247)
T ss_pred             CCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccC-------CCCccHHH
Confidence            89999999974221   2344556788999999988888777642  134567999999855444       12233455


Q ss_pred             hhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHH
Q 017977          192 AKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVN  271 (363)
Q Consensus       192 ~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  271 (363)
                      .+|.+...|.+      .+.. .+. ..|+++++++|+.+.++.......... .......      ....+...+|+++
T Consensus       157 ~sK~a~~~~~~------~~~~-~~~-~~gi~~~~v~pg~v~t~~~~~~~~~~~-~~~~~~~------~~~~~~~~~~va~  221 (247)
T PRK05565        157 ASKGAVNAFTK------ALAK-ELA-PSGIRVNAVAPGAIDTEMWSSFSEEDK-EGLAEEI------PLGRLGKPEEIAK  221 (247)
T ss_pred             HHHHHHHHHHH------HHHH-HHH-HcCeEEEEEEECCccCccccccChHHH-HHHHhcC------CCCCCCCHHHHHH
Confidence            44322211111      1111 111 238999999999987654322111000 0111111      1123678999999


Q ss_pred             HHHHHhcCCC--CCc-eEEeeCC
Q 017977          272 LIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       272 a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      +++.++....  ..| .+++.++
T Consensus       222 ~~~~l~~~~~~~~~g~~~~~~~~  244 (247)
T PRK05565        222 VVLFLASDDASYITGQIITVDGG  244 (247)
T ss_pred             HHHHHcCCccCCccCcEEEecCC
Confidence            9999987644  344 6666554

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.73  E-value=1.7e-16  Score=138.36  Aligned_cols=222  Identities=14%  Similarity=0.093  Sum_probs=139.1

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccC----CCCCccccCcccccCcchHHhhcc-------CC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (363)
                      .++++|||||+|+||++++++|+++|++|++++|+........    ..........+|+.|.+++.++++       .+
T Consensus         8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   87 (254)
T PRK08085          8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPI   87 (254)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence            3468999999999999999999999999999999875533221    111111234579998888776653       47


Q ss_pred             CEEEEccCCCCC---CCCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhh
Q 017977          118 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCA  192 (363)
Q Consensus       118 d~Vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~  192 (363)
                      |+|||++|....   .....+..+..+++|+.++..+++++.+.  ..+..++|++||..+.++       .+..+.|..
T Consensus        88 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-------~~~~~~Y~~  160 (254)
T PRK08085         88 DVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELG-------RDTITPYAA  160 (254)
T ss_pred             CEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccC-------CCCCcchHH
Confidence            999999996422   12345567788999999988888877653  134467999998743332       223345555


Q ss_pred             hhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHH-HhCCCCCCCCCccccccHHHHHH
Q 017977          193 KVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMM-FAGGPLGSGQQWFSWIHLDDIVN  271 (363)
Q Consensus       193 ~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~D~a~  271 (363)
                      +|.+...+.++      +..+ + ...|+++..++||.+.++.............. ....++      ..+...+|+++
T Consensus       161 sK~a~~~~~~~------la~e-~-~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~p~------~~~~~~~~va~  226 (254)
T PRK08085        161 SKGAVKMLTRG------MCVE-L-ARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPA------ARWGDPQELIG  226 (254)
T ss_pred             HHHHHHHHHHH------HHHH-H-HhhCeEEEEEEeCCCCCcchhhhccCHHHHHHHHhcCCC------CCCcCHHHHHH
Confidence            54332222211      1111 1 12389999999999988743211000001111 111221      23678999999


Q ss_pred             HHHHHhcCCC--CCc-eEEeeCC
Q 017977          272 LIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       272 a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      ++..++....  ..| ...+.++
T Consensus       227 ~~~~l~~~~~~~i~G~~i~~dgg  249 (254)
T PRK08085        227 AAVFLSSKASDFVNGHLLFVDGG  249 (254)
T ss_pred             HHHHHhCccccCCcCCEEEECCC
Confidence            9999987543  345 5555544

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.73  E-value=1.1e-16  Score=140.19  Aligned_cols=206  Identities=16%  Similarity=0.123  Sum_probs=131.6

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCccccc----CCCCCccccCcccccCcchHHhhcc-------CCCE
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTA  119 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~  119 (363)
                      ++||||||+|+||+++++.|+++|++|++++|+..+.+..    ...........+|+.|.+++..+++       ++|+
T Consensus         2 ~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   81 (263)
T PRK06181          2 KVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGIDI   81 (263)
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5899999999999999999999999999999986543322    1111112234578989888776664       6899


Q ss_pred             EEEccCCCCCCC---C-ChhhHHHHHHHHHHHHHHHHHHHHhC-CCCCCCeEEEeccceecCCcccccccCCCcchhhhh
Q 017977          120 VVNLAGTPIGTR---W-SSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKV  194 (363)
Q Consensus       120 Vi~~a~~~~~~~---~-~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~  194 (363)
                      |||+++......   . ..+.....+++|+.++.++++.+.+. ..+..++|++||..+.++       .+....|..+|
T Consensus        82 vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~-------~~~~~~Y~~sK  154 (263)
T PRK06181         82 LVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTG-------VPTRSGYAASK  154 (263)
T ss_pred             EEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCC-------CCCccHHHHHH
Confidence            999998643321   1 33345677999999999999998642 123467899998843222       12223455443


Q ss_pred             hhcccchhhHHHHHHHHHHHh--ccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCC-CCCCCccccccHHHHHH
Q 017977          195 YCLVSFNRGVLVCREWEGTAL--KVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPL-GSGQQWFSWIHLDDIVN  271 (363)
Q Consensus       195 ~~~~~y~~~k~~~~~~~~~~~--~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~D~a~  271 (363)
                                ...........  ....++++++++|+.+..+.....   ..    ..+.+. ..+.....+++++|+|+
T Consensus       155 ----------~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~---~~----~~~~~~~~~~~~~~~~~~~~dva~  217 (263)
T PRK06181        155 ----------HALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRA---LD----GDGKPLGKSPMQESKIMSAEECAE  217 (263)
T ss_pred             ----------HHHHHHHHHHHHHhhhcCceEEEEecCccccCcchhh---cc----ccccccccccccccCCCCHHHHHH
Confidence                      22222211111  112389999999999877632110   00    011111 11122236899999999


Q ss_pred             HHHHHhcCC
Q 017977          272 LIYEALSNP  280 (363)
Q Consensus       272 a~~~~~~~~  280 (363)
                      ++..+++..
T Consensus       218 ~i~~~~~~~  226 (263)
T PRK06181        218 AILPAIARR  226 (263)
T ss_pred             HHHHHhhCC
Confidence            999999753

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.73  E-value=2.4e-16  Score=138.94  Aligned_cols=218  Identities=13%  Similarity=0.081  Sum_probs=134.9

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc-------CCCEEEE
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVVN  122 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~Vi~  122 (363)
                      ||+++||||+|+||+++++.|+++|++|++++|+......+....  .....+|+.+.+++.++++       ++|+|||
T Consensus         1 mk~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~   78 (274)
T PRK05693          1 MPVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAAAG--FTAVQLDVNDGAALARLAEELEAEHGGLDVLIN   78 (274)
T ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCC--CeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence            468999999999999999999999999999999876544332211  1244579998887776553       6899999


Q ss_pred             ccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC-CCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhcc
Q 017977          123 LAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLV  198 (363)
Q Consensus       123 ~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~  198 (363)
                      +||.....   ....+..+..+++|+.++.++++++... ..+..++|++||..+.++       .+....|..+|... 
T Consensus        79 ~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~-------~~~~~~Y~~sK~al-  150 (274)
T PRK05693         79 NAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLV-------TPFAGAYCASKAAV-  150 (274)
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCC-------CCCccHHHHHHHHH-
Confidence            99964322   2244566788999999999998887542 123456888888744333       22233455543222 


Q ss_pred             cchhhHHHHHHHHHHHh-c-cCCCceEEEEeeceEEeCCCCcc-----------cchHHHHHHHhCCCCCCCCCcccccc
Q 017977          199 SFNRGVLVCREWEGTAL-K-VNKDVRLALIRIGIVLGKDGGAL-----------AKMIPLFMMFAGGPLGSGQQWFSWIH  265 (363)
Q Consensus       199 ~y~~~k~~~~~~~~~~~-~-~~~~~~~~ilRp~~v~g~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~i~  265 (363)
                               ..+..... . ...|+++++++|+.+.++.....           ..+.+.............   .....
T Consensus       151 ---------~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~  218 (274)
T PRK05693        151 ---------HALSDALRLELAPFGVQVMEVQPGAIASQFASNASREAEQLLAEQSPWWPLREHIQARARASQ---DNPTP  218 (274)
T ss_pred             ---------HHHHHHHHHHhhhhCeEEEEEecCccccccccccccchhhcCCCCCccHHHHHHHHHHHHhcc---CCCCC
Confidence                     22211111 1 12489999999999976532110           011111100000000000   12357


Q ss_pred             HHHHHHHHHHHhcCCCCCceEEee
Q 017977          266 LDDIVNLIYEALSNPSYRGVINGT  289 (363)
Q Consensus       266 v~D~a~a~~~~~~~~~~~g~~~i~  289 (363)
                      .+|+|+.++.+++.+.....+.++
T Consensus       219 ~~~~a~~i~~~~~~~~~~~~~~~g  242 (274)
T PRK05693        219 AAEFARQLLAAVQQSPRPRLVRLG  242 (274)
T ss_pred             HHHHHHHHHHHHhCCCCCceEEec
Confidence            899999999998765544455554

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.73  E-value=1.9e-16  Score=138.14  Aligned_cols=219  Identities=12%  Similarity=0.019  Sum_probs=136.1

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc-------CCCEEE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV  121 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~Vi  121 (363)
                      .+++|+||||+|+||++++++|+++|++|++++|+............. ....+|+.+.+++.++++       ++|+||
T Consensus         6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi   84 (255)
T PRK06057          6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGG-LFVPTDVTDEDAVNALFDTAAETYGSVDIAF   84 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC-cEEEeeCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            347999999999999999999999999999999987654322111110 145689999888877665       579999


Q ss_pred             EccCCCCCC-----CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhhh
Q 017977          122 NLAGTPIGT-----RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKV  194 (363)
Q Consensus       122 ~~a~~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~  194 (363)
                      |+||.....     ..+.+..+..+++|+.++..+++.+...  ..+..++|++||..++++.      .+....|..+ 
T Consensus        85 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~------~~~~~~Y~~s-  157 (255)
T PRK06057         85 NNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGS------ATSQISYTAS-  157 (255)
T ss_pred             ECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCC------CCCCcchHHH-
Confidence            999864211     2234556788999999988777766431  1345578999887555541      0112234444 


Q ss_pred             hhcccchhhHHHHHHHHHH---HhccCCCceEEEEeeceEEeCCCCcc-cchHHHH-HHHhCCCCCCCCCccccccHHHH
Q 017977          195 YCLVSFNRGVLVCREWEGT---ALKVNKDVRLALIRIGIVLGKDGGAL-AKMIPLF-MMFAGGPLGSGQQWFSWIHLDDI  269 (363)
Q Consensus       195 ~~~~~y~~~k~~~~~~~~~---~~~~~~~~~~~ilRp~~v~g~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~  269 (363)
                               |.........   .+. ..|+++++++|+.+.++..... ..-.... ......+.      ..+..++|+
T Consensus       158 ---------Kaal~~~~~~l~~~~~-~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~  221 (255)
T PRK06057        158 ---------KGGVLAMSRELGVQFA-RQGIRVNALCPGPVNTPLLQELFAKDPERAARRLVHVPM------GRFAEPEEI  221 (255)
T ss_pred             ---------HHHHHHHHHHHHHHHH-hhCcEEEEEeeCCcCCchhhhhccCCHHHHHHHHhcCCC------CCCcCHHHH
Confidence                     3221111111   111 2389999999999987743211 0001111 11111111      247889999


Q ss_pred             HHHHHHHhcCCC--CCc-eEEeeCC
Q 017977          270 VNLIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       270 a~a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      ++++..++....  ..| .+.+.++
T Consensus       222 a~~~~~l~~~~~~~~~g~~~~~~~g  246 (255)
T PRK06057        222 AAAVAFLASDDASFITASTFLVDGG  246 (255)
T ss_pred             HHHHHHHhCccccCccCcEEEECCC
Confidence            999988886543  334 6666554

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.73  E-value=1.2e-16  Score=139.60  Aligned_cols=214  Identities=12%  Similarity=0.084  Sum_probs=126.8

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccC----CCCCccccCcccccCcchHHhhcc-CCCEEEEcc
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-GSTAVVNLA  124 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-~~d~Vi~~a  124 (363)
                      +++||||||+|+||+++++.|+++|++|++++|+......+.    ..........+|+.|.+++..++. ++|+|||+|
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~a   81 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNNA   81 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEECC
Confidence            358999999999999999999999999999999865432211    111112244579999999988876 899999999


Q ss_pred             CCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhccc
Q 017977          125 GTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVS  199 (363)
Q Consensus       125 ~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~~  199 (363)
                      +.....   ..+.+..+..+++|+.++.++.+.+.+.  ..+.+++|++||.++.++       .+....|..+|     
T Consensus        82 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~-------~~~~~~Y~~sK-----  149 (257)
T PRK09291         82 GIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLIT-------GPFTGAYCASK-----  149 (257)
T ss_pred             CcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccC-------CCCcchhHHHH-----
Confidence            964322   2234556678889999877666544321  145578999998744322       12223454443     


Q ss_pred             chhhHHHHHHHHHHHh--ccCCCceEEEEeeceEEeCCCCcc-cchHHHHHHHhC-CCCCCCCCccccccHHHHHHHHHH
Q 017977          200 FNRGVLVCREWEGTAL--KVNKDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAG-GPLGSGQQWFSWIHLDDIVNLIYE  275 (363)
Q Consensus       200 y~~~k~~~~~~~~~~~--~~~~~~~~~ilRp~~v~g~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~i~v~D~a~a~~~  275 (363)
                           ...........  ....|++++++||+.+..+..... ..+......... .+..........+..+|+++.++.
T Consensus       150 -----~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (257)
T PRK09291        150 -----HALEAIAEAMHAELKPFGIQVATVNPGPYLTGFNDTMAETPKRWYDPARNFTDPEDLAFPLEQFDPQEMIDAMVE  224 (257)
T ss_pred             -----HHHHHHHHHHHHHHHhcCcEEEEEecCcccccchhhhhhhhhhhcchhhHHHhhhhhhccccCCCHHHHHHHHHH
Confidence                 22222111111  112489999999998754321100 001000000000 000111222345778888888887


Q ss_pred             HhcCC
Q 017977          276 ALSNP  280 (363)
Q Consensus       276 ~~~~~  280 (363)
                      ++..+
T Consensus       225 ~l~~~  229 (257)
T PRK09291        225 VIPAD  229 (257)
T ss_pred             HhcCC
Confidence            77654

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.73  E-value=6.4e-17  Score=141.51  Aligned_cols=207  Identities=11%  Similarity=0.084  Sum_probs=131.6

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCC--CCccccCcccccCcchHHhhcc--------CCCE
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG--KKTRFFPGVMIAEEPQWRDCIQ--------GSTA  119 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~--------~~d~  119 (363)
                      |++++||||+|+||++++++|+++|++|++++|+......+...  .....+..+|+.|.+++.++++        ++|+
T Consensus         1 mk~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~   80 (260)
T PRK08267          1 MKSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDV   80 (260)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCE
Confidence            46899999999999999999999999999999988664433211  1122255689999887776554        4699


Q ss_pred             EEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhhh
Q 017977          120 VVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKV  194 (363)
Q Consensus       120 Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~  194 (363)
                      |||+||.....   ..+.+..+..+++|+.++.++++++...  ..+..++|++||..+.++       .+....|..+|
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-------~~~~~~Y~~sK  153 (260)
T PRK08267         81 LFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYG-------QPGLAVYSATK  153 (260)
T ss_pred             EEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcC-------CCCchhhHHHH
Confidence            99999975332   2234566788999999999998887532  134567999999866555       12223454443


Q ss_pred             hhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHHH
Q 017977          195 YCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY  274 (363)
Q Consensus       195 ~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~  274 (363)
                      .....|.+       .....+. ..++++++++|+.+..+......... ......        ...-.+..+|+|++++
T Consensus       154 aa~~~~~~-------~l~~~~~-~~~i~v~~i~pg~~~t~~~~~~~~~~-~~~~~~--------~~~~~~~~~~va~~~~  216 (260)
T PRK08267        154 FAVRGLTE-------ALDLEWR-RHGIRVADVMPLFVDTAMLDGTSNEV-DAGSTK--------RLGVRLTPEDVAEAVW  216 (260)
T ss_pred             HHHHHHHH-------HHHHHhc-ccCcEEEEEecCCcCCcccccccchh-hhhhHh--------hccCCCCHHHHHHHHH
Confidence            22111111       1111111 23899999999998765321100000 000000        0111366799999999


Q ss_pred             HHhcCC
Q 017977          275 EALSNP  280 (363)
Q Consensus       275 ~~~~~~  280 (363)
                      .++...
T Consensus       217 ~~~~~~  222 (260)
T PRK08267        217 AAVQHP  222 (260)
T ss_pred             HHHhCC
Confidence            999653

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.73  E-value=1.4e-16  Score=138.16  Aligned_cols=217  Identities=16%  Similarity=0.081  Sum_probs=130.9

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEE-eCCCCccccc----CCCCCccccCcccccCcchHHhhcc-------CC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVL-TRSRSKAELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (363)
                      |++|+||||+|+||+++++.|+++|++|+++ .|+..+....    ...........+|+.|.+++.++++       ++
T Consensus         1 ~~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~i   80 (247)
T PRK09730          1 MAIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPL   80 (247)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCC
Confidence            3579999999999999999999999999875 4554332211    1111112245689999988877665       46


Q ss_pred             CEEEEccCCCCC----CCCChhhHHHHHHHHHHHHHHHHHHHHhC-C-C---CCCCeEEEeccceecCCcccccccCC-C
Q 017977          118 TAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES-P-E---GVRPSVLELVKPKYLMRAAHQEMITW-L  187 (363)
Q Consensus       118 d~Vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~---~~~~~v~~SS~~~~yg~~~~~e~~~~-~  187 (363)
                      |+|||+++....    .....+..+..+++|+.++.++++++... . .   ...++|++||.+++++       .+. .
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~-------~~~~~  153 (247)
T PRK09730         81 AALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLG-------APGEY  153 (247)
T ss_pred             CEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccC-------CCCcc
Confidence            899999996422    12233456678999999998777766542 0 1   2345999999855444       111 1


Q ss_pred             cchhhhhhhcccchhhHHHHHHHHHHHh-c-cCCCceEEEEeeceEEeCCCCcccchHHHH-HHHhCCCCCCCCCccccc
Q 017977          188 SDYCAKVYCLVSFNRGVLVCREWEGTAL-K-VNKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWI  264 (363)
Q Consensus       188 ~~~~~~~~~~~~y~~~k~~~~~~~~~~~-~-~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i  264 (363)
                      ..|..+          |.....+..... . ...+++++++||+.++++....... .... ......++.      ...
T Consensus       154 ~~Y~~s----------K~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~~-~~~~~~~~~~~~~~------~~~  216 (247)
T PRK09730        154 VDYAAS----------KGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGE-PGRVDRVKSNIPMQ------RGG  216 (247)
T ss_pred             cchHhH----------HHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCCC-HHHHHHHHhcCCCC------CCc
Confidence            234444          322222211111 1 1238999999999999985321111 1111 111222221      134


Q ss_pred             cHHHHHHHHHHHhcCCC--CCc-eEEeeC
Q 017977          265 HLDDIVNLIYEALSNPS--YRG-VINGTA  290 (363)
Q Consensus       265 ~v~D~a~a~~~~~~~~~--~~g-~~~i~~  290 (363)
                      +++|+|++++.++....  ..| .+.+.+
T Consensus       217 ~~~dva~~~~~~~~~~~~~~~g~~~~~~g  245 (247)
T PRK09730        217 QPEEVAQAIVWLLSDKASYVTGSFIDLAG  245 (247)
T ss_pred             CHHHHHHHHHhhcChhhcCccCcEEecCC
Confidence            78999999999887543  334 555554

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.73  E-value=1.1e-16  Score=138.30  Aligned_cols=205  Identities=12%  Similarity=0.085  Sum_probs=131.3

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCC----CCCccccCcccccCcchHHhhcc-------CC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (363)
                      .|++++||||+|++|+.++++|+++|++|++++|++.+...+..    .........+|+.+.+++..+++       ++
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCP   84 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            45789999999999999999999999999999998765432211    11112244689999887766654       48


Q ss_pred             CEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhh
Q 017977          118 TAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCA  192 (363)
Q Consensus       118 d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~  192 (363)
                      |+|||++|.....   ....+..+..+++|+.++.++++++.+.  ..+..++|++||. ..++      ..+....|..
T Consensus        85 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~-~~~~------~~~~~~~Y~~  157 (241)
T PRK07454         85 DVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSI-AARN------AFPQWGAYCV  157 (241)
T ss_pred             CEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccH-HhCc------CCCCccHHHH
Confidence            9999999864321   2234556778999999988877776432  1445679999998 4332      1122234554


Q ss_pred             hhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHH
Q 017977          193 KVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL  272 (363)
Q Consensus       193 ~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a  272 (363)
                      +|.....+.++       ..... ...|++++++||+.+-.+..... ....        ..    ....++..+|+|++
T Consensus       158 sK~~~~~~~~~-------~a~e~-~~~gi~v~~i~pg~i~t~~~~~~-~~~~--------~~----~~~~~~~~~~va~~  216 (241)
T PRK07454        158 SKAALAAFTKC-------LAEEE-RSHGIRVCTITLGAVNTPLWDTE-TVQA--------DF----DRSAMLSPEQVAQT  216 (241)
T ss_pred             HHHHHHHHHHH-------HHHHh-hhhCCEEEEEecCcccCCccccc-cccc--------cc----ccccCCCHHHHHHH
Confidence            43222221110       00111 12389999999999877642110 0000        00    01135889999999


Q ss_pred             HHHHhcCCC
Q 017977          273 IYEALSNPS  281 (363)
Q Consensus       273 ~~~~~~~~~  281 (363)
                      +..++.++.
T Consensus       217 ~~~l~~~~~  225 (241)
T PRK07454        217 ILHLAQLPP  225 (241)
T ss_pred             HHHHHcCCc
Confidence            999998765

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.72  E-value=3.1e-16  Score=136.72  Aligned_cols=220  Identities=14%  Similarity=0.064  Sum_probs=135.3

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCC----CCCccccCcccccCcchHHhhcc-------CCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GST  118 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~d  118 (363)
                      +++++||||+|+||+++++.|+++|++|++++|++.+.+....    .........+|+.+.+++.++++       .+|
T Consensus         6 ~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   85 (254)
T PRK07478          6 GKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGLD   85 (254)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCC
Confidence            4689999999999999999999999999999998765433211    11112244579998887776664       689


Q ss_pred             EEEEccCCCCC----CCCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhh
Q 017977          119 AVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCA  192 (363)
Q Consensus       119 ~Vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~  192 (363)
                      +|||+||....    ...+.+..+..+++|+.++..+.+++...  ..+..++|++||..+ +.     ...+....|..
T Consensus        86 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~-~~-----~~~~~~~~Y~~  159 (254)
T PRK07478         86 IAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVG-HT-----AGFPGMAAYAA  159 (254)
T ss_pred             EEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHh-hc-----cCCCCcchhHH
Confidence            99999996321    12344556788999998877776654432  145567999998732 11     01122334555


Q ss_pred             hhhhcccchhhHHHHHHHHHHHhcc--CCCceEEEEeeceEEeCCCCcccchHHHHHHHhC-CCCCCCCCccccccHHHH
Q 017977          193 KVYCLVSFNRGVLVCREWEGTALKV--NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAG-GPLGSGQQWFSWIHLDDI  269 (363)
Q Consensus       193 ~~~~~~~y~~~k~~~~~~~~~~~~~--~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~v~D~  269 (363)
                      +|.+          ...........  ..|+.+++++||.+-.+................. .+.      ..+...+|+
T Consensus       160 sK~a----------~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~v  223 (254)
T PRK07478        160 SKAG----------LIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDTPEALAFVAGLHAL------KRMAQPEEI  223 (254)
T ss_pred             HHHH----------HHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCCHHHHHHHHhcCCC------CCCcCHHHH
Confidence            4322          22221111111  2389999999999976632111110010111111 111      235789999


Q ss_pred             HHHHHHHhcCCC--CCc-eEEeeCC
Q 017977          270 VNLIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       270 a~a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      |++++.++....  ..| ++.+.++
T Consensus       224 a~~~~~l~s~~~~~~~G~~~~~dgg  248 (254)
T PRK07478        224 AQAALFLASDAASFVTGTALLVDGG  248 (254)
T ss_pred             HHHHHHHcCchhcCCCCCeEEeCCc
Confidence            999999987543  344 5666554

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.72  E-value=4.6e-16  Score=135.41  Aligned_cols=222  Identities=15%  Similarity=0.125  Sum_probs=131.8

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeC-CCCcccc----cCCCCCccccCcccccCcchHHhhc----------
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTR-SRSKAEL----IFPGKKTRFFPGVMIAEEPQWRDCI----------  114 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~----~~~~~~~~~~~~~d~~~~~~~~~~~----------  114 (363)
                      +++++||||+|+||+++++.|++.|++|.++.+ +......    +...........+|+.+.+++...+          
T Consensus         4 ~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   83 (252)
T PRK12747          4 GKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQNR   83 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhhh
Confidence            468999999999999999999999999988754 3333221    1111111123346787766554322          


Q ss_pred             ---cCCCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCc
Q 017977          115 ---QGSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLS  188 (363)
Q Consensus       115 ---~~~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~  188 (363)
                         .++|+|||+||.....   ....+..+..+++|+.++..+++++.+.-....++|++||..+..+       .+...
T Consensus        84 ~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~-------~~~~~  156 (252)
T PRK12747         84 TGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRIS-------LPDFI  156 (252)
T ss_pred             cCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccC-------CCCch
Confidence               1589999999964221   2234456778899999999999888763112357999999843221       12223


Q ss_pred             chhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHH
Q 017977          189 DYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDD  268 (363)
Q Consensus       189 ~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  268 (363)
                      .|..+|.+...+.++       ....+. ..|+++..+.|+.+.++....... .+........ .   .....+.+++|
T Consensus       157 ~Y~~sKaa~~~~~~~-------la~e~~-~~girvn~v~Pg~v~t~~~~~~~~-~~~~~~~~~~-~---~~~~~~~~~~d  223 (252)
T PRK12747        157 AYSMTKGAINTMTFT-------LAKQLG-ARGITVNAILPGFIKTDMNAELLS-DPMMKQYATT-I---SAFNRLGEVED  223 (252)
T ss_pred             hHHHHHHHHHHHHHH-------HHHHHh-HcCCEEEEEecCCccCchhhhccc-CHHHHHHHHh-c---CcccCCCCHHH
Confidence            455554332222211       111111 238999999999998874321100 0111101000 0   01123788999


Q ss_pred             HHHHHHHHhcCCC--CCc-eEEeeCC
Q 017977          269 IVNLIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       269 ~a~a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      +|+++..++....  ..| .+.+.++
T Consensus       224 va~~~~~l~s~~~~~~~G~~i~vdgg  249 (252)
T PRK12747        224 IADTAAFLASPDSRWVTGQLIDVSGG  249 (252)
T ss_pred             HHHHHHHHcCccccCcCCcEEEecCC
Confidence            9999999886543  344 5666554

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.72  E-value=2.7e-16  Score=136.72  Aligned_cols=222  Identities=11%  Similarity=0.096  Sum_probs=138.2

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcc--cccCCCCCccccCcccccCcchHHhhcc-------CCCE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA--ELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTA  119 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~  119 (363)
                      .+++++||||+|+||++++++|+++|++|++++|+..+.  ..............+|+.+.+++.++++       ++|+
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD~   86 (251)
T PRK12481          7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHIDI   86 (251)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            347899999999999999999999999999998865321  1111111112245689999988877664       5799


Q ss_pred             EEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCC-CCCeEEEeccceecCCcccccccCCCcchhhh
Q 017977          120 VVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLELVKPKYLMRAAHQEMITWLSDYCAK  193 (363)
Q Consensus       120 Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~-~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~  193 (363)
                      +||+||.....   ....+..+..+++|+.++..+.+++.+.  ..+ ..++|++||..+..+       .+..+.|..+
T Consensus        87 lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~-------~~~~~~Y~as  159 (251)
T PRK12481         87 LINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQG-------GIRVPSYTAS  159 (251)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCC-------CCCCcchHHH
Confidence            99999974332   2345667888999999988888877642  122 357999999843222       1223356655


Q ss_pred             hhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHH-HHHhCCCCCCCCCccccccHHHHHHH
Q 017977          194 VYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNL  272 (363)
Q Consensus       194 ~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~a  272 (363)
                      |.+...|.++  +..     .+. ..|+++..++||.+-.+............ ......|.      ..+...+|+|++
T Consensus       160 K~a~~~l~~~--la~-----e~~-~~girvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~------~~~~~peeva~~  225 (251)
T PRK12481        160 KSAVMGLTRA--LAT-----ELS-QYNINVNAIAPGYMATDNTAALRADTARNEAILERIPA------SRWGTPDDLAGP  225 (251)
T ss_pred             HHHHHHHHHH--HHH-----HHh-hcCeEEEEEecCCCccCchhhcccChHHHHHHHhcCCC------CCCcCHHHHHHH
Confidence            5443333221  011     111 24899999999998765322111000000 11111121      126789999999


Q ss_pred             HHHHhcCCC--CCc-eEEeeCC
Q 017977          273 IYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       273 ~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      +..++....  ..| .+.+.++
T Consensus       226 ~~~L~s~~~~~~~G~~i~vdgg  247 (251)
T PRK12481        226 AIFLSSSASDYVTGYTLAVDGG  247 (251)
T ss_pred             HHHHhCccccCcCCceEEECCC
Confidence            999987533  444 5555443

>PRK12743 oxidoreductase; Provisional

Probab=99.72  E-value=6.2e-16  Score=134.91  Aligned_cols=219  Identities=12%  Similarity=0.025  Sum_probs=135.7

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCc-ccc----cCCCCCccccCcccccCcchHHhhcc-------CC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK-AEL----IFPGKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~----~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (363)
                      +++|+||||+|+||+++++.|+++|++|+++.|+..+ ...    +...........+|+.+.+++..+++       .+
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI   81 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            3589999999999999999999999999988765433 211    11111122245689998887766554       57


Q ss_pred             CEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CC-CCCCeEEEeccceecCCcccccccCCCcchh
Q 017977          118 TAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PE-GVRPSVLELVKPKYLMRAAHQEMITWLSDYC  191 (363)
Q Consensus       118 d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~-~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~  191 (363)
                      |+|||++|.....   ....+..+..+++|+.++..+++++...  .. ...++|++||..+..+       .+....|.
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~-------~~~~~~Y~  154 (256)
T PRK12743         82 DVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTP-------LPGASAYT  154 (256)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCC-------CCCcchhH
Confidence            9999999874321   2244567788999999999999887653  11 2357999998743211       22333455


Q ss_pred             hhhhhcccchhhHHHHHHHHHHHhc--cCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHH
Q 017977          192 AKVYCLVSFNRGVLVCREWEGTALK--VNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDI  269 (363)
Q Consensus       192 ~~~~~~~~y~~~k~~~~~~~~~~~~--~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  269 (363)
                      ..|.          ....+......  ...+++++.++|+.+.++.......-.. .......+++      .+.+.+|+
T Consensus       155 ~sK~----------a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~-~~~~~~~~~~------~~~~~~dv  217 (256)
T PRK12743        155 AAKH----------ALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMDDSDVK-PDSRPGIPLG------RPGDTHEI  217 (256)
T ss_pred             HHHH----------HHHHHHHHHHHHhhhhCeEEEEEEeCCccCccccccChHHH-HHHHhcCCCC------CCCCHHHH
Confidence            4432          22222211111  1238999999999999874321111000 0111111221      25689999


Q ss_pred             HHHHHHHhcCCC--CCc-eEEeeCCC
Q 017977          270 VNLIYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       270 a~a~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      ++++..++....  ..| .+.+.++.
T Consensus       218 a~~~~~l~~~~~~~~~G~~~~~dgg~  243 (256)
T PRK12743        218 ASLVAWLCSEGASYTTGQSLIVDGGF  243 (256)
T ss_pred             HHHHHHHhCccccCcCCcEEEECCCc
Confidence            999998886543  345 55555553

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.72  E-value=4e-16  Score=136.38  Aligned_cols=221  Identities=15%  Similarity=0.101  Sum_probs=137.9

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccC----CCCCccccCcccccCcchHHhhcc-------CCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GST  118 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~~d  118 (363)
                      .++++||||+|+||+++++.|+++|++|++++|+.++.+...    ..........+|+.|.+++.++++       ++|
T Consensus        12 ~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~id   91 (259)
T PRK08213         12 GKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGHVD   91 (259)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence            468999999999999999999999999999999875433221    111112245689999888865553       579


Q ss_pred             EEEEccCCCCC---CCCChhhHHHHHHHHHHHHHHHHHHHHhC---CCCCCCeEEEeccceecCCcccccccCCCcchhh
Q 017977          119 AVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES---PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCA  192 (363)
Q Consensus       119 ~Vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~  192 (363)
                      +|||+|+....   .....+..+..++.|+.++.++++++.+.   ..+.+++|++||.++.++..+   ..+....|..
T Consensus        92 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~---~~~~~~~Y~~  168 (259)
T PRK08213         92 ILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPP---EVMDTIAYNT  168 (259)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCc---cccCcchHHH
Confidence            99999986422   12334556778899999999999987651   124567999999744444111   0011234444


Q ss_pred             hhhhcccchhhHHHHHHHHHHHhcc--CCCceEEEEeeceEEeCCCCc-ccchHHHHHHHhCCCCCCCCCccccccHHHH
Q 017977          193 KVYCLVSFNRGVLVCREWEGTALKV--NKDVRLALIRIGIVLGKDGGA-LAKMIPLFMMFAGGPLGSGQQWFSWIHLDDI  269 (363)
Q Consensus       193 ~~~~~~~y~~~k~~~~~~~~~~~~~--~~~~~~~ilRp~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  269 (363)
                      +          |.....+.......  ..++.+.+++|+.+-++.... ...+...  .....++      .-+...+|+
T Consensus       169 s----------Ka~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~--~~~~~~~------~~~~~~~~v  230 (259)
T PRK08213        169 S----------KGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGTLERLGED--LLAHTPL------GRLGDDEDL  230 (259)
T ss_pred             H----------HHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhhhHHHHHH--HHhcCCC------CCCcCHHHH
Confidence            4          33332222222111  238999999999887653221 1111111  1122222      124578999


Q ss_pred             HHHHHHHhcCCC--CCc-eEEeeCC
Q 017977          270 VNLIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       270 a~a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      ++++..++....  ..| .+++.++
T Consensus       231 a~~~~~l~~~~~~~~~G~~~~~~~~  255 (259)
T PRK08213        231 KGAALLLASDASKHITGQILAVDGG  255 (259)
T ss_pred             HHHHHHHhCccccCccCCEEEECCC
Confidence            999988886543  345 6666554

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.72  E-value=3.9e-16  Score=136.75  Aligned_cols=221  Identities=13%  Similarity=0.028  Sum_probs=137.8

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCC----CCCccccCcccccCcchHHhhcc-------CC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (363)
                      .+++++||||+|+||+++++.|+++|++|++++|+....+.+..    ......+..+|+.+.+++.++++       ++
T Consensus         9 ~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   88 (263)
T PRK07814          9 DDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGRL   88 (263)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            34789999999999999999999999999999998755332211    11112244589999888776554       68


Q ss_pred             CEEEEccCCCCC---CCCChhhHHHHHHHHHHHHHHHHHHHHhC--C-CCCCCeEEEeccceecCCcccccccCCCcchh
Q 017977          118 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--P-EGVRPSVLELVKPKYLMRAAHQEMITWLSDYC  191 (363)
Q Consensus       118 d~Vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~-~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~  191 (363)
                      |+|||+|+....   .....+..+..+++|+.++.++.+++.+.  . .+..++|++||..+.++       .+..+.|.
T Consensus        89 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~-------~~~~~~Y~  161 (263)
T PRK07814         89 DIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLA-------GRGFAAYG  161 (263)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCC-------CCCCchhH
Confidence            999999986332   12344567788999999999999998742  0 24567999998754332       23334555


Q ss_pred             hhhhhcccchhhHHHHHHHHHHHhc-cCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHH
Q 017977          192 AKVYCLVSFNRGVLVCREWEGTALK-VNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIV  270 (363)
Q Consensus       192 ~~~~~~~~y~~~k~~~~~~~~~~~~-~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  270 (363)
                      .+|..          .......... ...++.++.++|+.+..+.......-........+. .    ....+..++|+|
T Consensus       162 ~sK~a----------~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~va  226 (263)
T PRK07814        162 TAKAA----------LAHYTRLAALDLCPRIRVNAIAPGSILTSALEVVAANDELRAPMEKA-T----PLRRLGDPEDIA  226 (263)
T ss_pred             HHHHH----------HHHHHHHHHHHHCCCceEEEEEeCCCcCchhhhccCCHHHHHHHHhc-C----CCCCCcCHHHHH
Confidence            55422          2222111111 112689999999988765321110000111111111 0    112356899999


Q ss_pred             HHHHHHhcCCC--CCc-eEEeeCC
Q 017977          271 NLIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       271 ~a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      ++++.++....  ..| .+.+.++
T Consensus       227 ~~~~~l~~~~~~~~~g~~~~~~~~  250 (263)
T PRK07814        227 AAAVYLASPAGSYLTGKTLEVDGG  250 (263)
T ss_pred             HHHHHHcCccccCcCCCEEEECCC
Confidence            99999987542  334 5555543

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=99.72  E-value=2.4e-16  Score=122.95  Aligned_cols=206  Identities=15%  Similarity=0.172  Sum_probs=136.1

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCCCCCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGT  130 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~~~~~  130 (363)
                      |||.|+||||.+|++|+++++++||+|++++|++++........    ..+.|+.|.+++.+.+.+.|+||...+...  
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~~~~~----i~q~Difd~~~~a~~l~g~DaVIsA~~~~~--   74 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAARQGVT----ILQKDIFDLTSLASDLAGHDAVISAFGAGA--   74 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhccccccce----eecccccChhhhHhhhcCCceEEEeccCCC--
Confidence            69999999999999999999999999999999998876542211    445799999999999999999998877531  


Q ss_pred             CCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC-CcccccccCCCc-chhhhhhhcccchhhHHHHH
Q 017977          131 RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM-RAAHQEMITWLS-DYCAKVYCLVSFNRGVLVCR  208 (363)
Q Consensus       131 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg-~~~~~e~~~~~~-~~~~~~~~~~~y~~~k~~~~  208 (363)
                        +. +...    .......+++.++.  .++.|++.+...++.|- +..--.+.|..| .|...         .+ ..+
T Consensus        75 --~~-~~~~----~~k~~~~li~~l~~--agv~RllVVGGAGSL~id~g~rLvD~p~fP~ey~~~---------A~-~~a  135 (211)
T COG2910          75 --SD-NDEL----HSKSIEALIEALKG--AGVPRLLVVGGAGSLEIDEGTRLVDTPDFPAEYKPE---------AL-AQA  135 (211)
T ss_pred             --CC-hhHH----HHHHHHHHHHHHhh--cCCeeEEEEcCccceEEcCCceeecCCCCchhHHHH---------HH-HHH
Confidence              11 1111    22335678888888  89999999999876665 222222223222 34333         00 112


Q ss_pred             HHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHHHHHhcCCCC-CceEE
Q 017977          209 EWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSY-RGVIN  287 (363)
Q Consensus       209 ~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~-~g~~~  287 (363)
                      +... ..+...+++|+.+-|+.++-|+.... .+    +. -+..+-....--+.|..+|.|-+++.-++++.. ...|.
T Consensus       136 e~L~-~Lr~~~~l~WTfvSPaa~f~PGerTg-~y----rl-ggD~ll~n~~G~SrIS~aDYAiA~lDe~E~~~h~rqRft  208 (211)
T COG2910         136 EFLD-SLRAEKSLDWTFVSPAAFFEPGERTG-NY----RL-GGDQLLVNAKGESRISYADYAIAVLDELEKPQHIRQRFT  208 (211)
T ss_pred             HHHH-HHhhccCcceEEeCcHHhcCCccccC-ce----Ee-ccceEEEcCCCceeeeHHHHHHHHHHHHhcccccceeee
Confidence            2222 22333369999999999998854221 11    00 111121112223689999999999999998873 33554


Q ss_pred             e
Q 017977          288 G  288 (363)
Q Consensus       288 i  288 (363)
                      +
T Consensus       209 v  209 (211)
T COG2910         209 V  209 (211)
T ss_pred             e
Confidence            4

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.72  E-value=1.5e-16  Score=143.78  Aligned_cols=217  Identities=14%  Similarity=0.047  Sum_probs=135.7

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccC----CCCCccccCcccccCcchHHhhcc-------CC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (363)
                      .+++|+||||+|+||++++++|+++|++|++++|+....+...    ..........+|+.|.++++++++       .+
T Consensus         7 ~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~i   86 (334)
T PRK07109          7 GRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPI   86 (334)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCC
Confidence            3468999999999999999999999999999999875543221    111112244679999888876654       68


Q ss_pred             CEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhh
Q 017977          118 TAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCA  192 (363)
Q Consensus       118 d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~  192 (363)
                      |++||+|+.....   ....+..+..+++|+.+..++.+++.+.  ..+..++|++||..+ +.      ..+....|..
T Consensus        87 D~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~-~~------~~~~~~~Y~a  159 (334)
T PRK07109         87 DTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALA-YR------SIPLQSAYCA  159 (334)
T ss_pred             CEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhh-cc------CCCcchHHHH
Confidence            9999999964322   2344566778899988876655554432  145577999999843 22      1222345655


Q ss_pred             hhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHH
Q 017977          193 KVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL  272 (363)
Q Consensus       193 ~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a  272 (363)
                      +|.+...|..      .+..+......++.+++++|+.+.++....       .....+..   ......+..++|+|++
T Consensus       160 sK~a~~~~~~------~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~-------~~~~~~~~---~~~~~~~~~pe~vA~~  223 (334)
T PRK07109        160 AKHAIRGFTD------SLRCELLHDGSPVSVTMVQPPAVNTPQFDW-------ARSRLPVE---PQPVPPIYQPEVVADA  223 (334)
T ss_pred             HHHHHHHHHH------HHHHHHhhcCCCeEEEEEeCCCccCchhhh-------hhhhcccc---ccCCCCCCCHHHHHHH
Confidence            5443333321      111222222237999999999987663211       00000000   0111236789999999


Q ss_pred             HHHHhcCCCCCceEEeeC
Q 017977          273 IYEALSNPSYRGVINGTA  290 (363)
Q Consensus       273 ~~~~~~~~~~~g~~~i~~  290 (363)
                      ++.++.++  ...+++++
T Consensus       224 i~~~~~~~--~~~~~vg~  239 (334)
T PRK07109        224 ILYAAEHP--RRELWVGG  239 (334)
T ss_pred             HHHHHhCC--CcEEEeCc
Confidence            99999875  23455554

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.72  E-value=1.4e-16  Score=139.43  Aligned_cols=226  Identities=13%  Similarity=0.010  Sum_probs=139.7

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCC-----CCccccCcccccCcchHHhhcc------CC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KKTRFFPGVMIAEEPQWRDCIQ------GS  117 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~------~~  117 (363)
                      .+++++||||+|.||+++++.|+++|++|++++|+..+.+.....     ........+|+.|.+++.++++      ++
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~i   86 (263)
T PRK08339          7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGEP   86 (263)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCCC
Confidence            346899999999999999999999999999999987553322110     1112245689999988877665      58


Q ss_pred             CEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhh
Q 017977          118 TAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCA  192 (363)
Q Consensus       118 d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~  192 (363)
                      |++||+||.....   ..+.+..+..+++|+.+...+.+++.+.  ..+..++|++||.++..       ..+....|..
T Consensus        87 D~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~-------~~~~~~~y~a  159 (263)
T PRK08339         87 DIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKE-------PIPNIALSNV  159 (263)
T ss_pred             cEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccC-------CCCcchhhHH
Confidence            9999999964332   2345667888999988876666555432  14556799999984311       1222334655


Q ss_pred             hhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCccc-c--------hHHHHHH-HhCCCCCCCCCccc
Q 017977          193 KVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALA-K--------MIPLFMM-FAGGPLGSGQQWFS  262 (363)
Q Consensus       193 ~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~-~--------~~~~~~~-~~~~~~~~~~~~~~  262 (363)
                      +|.+...|.++       ....+. ..|+++..+.||.+..+...... .        .-..... ....|+      ..
T Consensus       160 sKaal~~l~~~-------la~el~-~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~------~r  225 (263)
T PRK08339        160 VRISMAGLVRT-------LAKELG-PKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPL------GR  225 (263)
T ss_pred             HHHHHHHHHHH-------HHHHhc-ccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhccCCc------cc
Confidence            54443333221       111111 23899999999999765211000 0        0000111 111111      23


Q ss_pred             cccHHHHHHHHHHHhcCCC--CCc-eEEeeCCCCcC
Q 017977          263 WIHLDDIVNLIYEALSNPS--YRG-VINGTAPNPVR  295 (363)
Q Consensus       263 ~i~v~D~a~a~~~~~~~~~--~~g-~~~i~~~~~~s  295 (363)
                      +..++|+|+++..++....  ..| .+.+.++...|
T Consensus       226 ~~~p~dva~~v~fL~s~~~~~itG~~~~vdgG~~~~  261 (263)
T PRK08339        226 LGEPEEIGYLVAFLASDLGSYINGAMIPVDGGRLNS  261 (263)
T ss_pred             CcCHHHHHHHHHHHhcchhcCccCceEEECCCcccc
Confidence            6789999999999987543  445 66666554433

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.72  E-value=5.2e-16  Score=134.48  Aligned_cols=219  Identities=13%  Similarity=0.055  Sum_probs=137.3

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCc-cccc----CCCCCccccCcccccCcchHHhhcc-------CCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK-AELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------GST  118 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d  118 (363)
                      ++|+||||+|+||+++++.|+++|++|++++|+..+ ....    ........+..+|+.+.+++.++++       .+|
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id   82 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVD   82 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            589999999999999999999999999999998532 1111    1111112245689999888776654       489


Q ss_pred             EEEEccCCCCC---CCCChhhHHHHHHHHHHHHHHHHHHH----HhCCCCCCCeEEEeccceecCCcccccccCCCcchh
Q 017977          119 AVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYC  191 (363)
Q Consensus       119 ~Vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~  191 (363)
                      +|||+++....   .....+..+..++.|+.++.++.+++    .+  .+..++|++||..+..+       .+..+.|.
T Consensus        83 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~~iv~iss~~~~~~-------~~~~~~Y~  153 (245)
T PRK12824         83 ILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCE--QGYGRIINISSVNGLKG-------QFGQTNYS  153 (245)
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH--hCCeEEEEECChhhccC-------CCCChHHH
Confidence            99999997432   12345667788999999988875544    44  45678999998843221       12233455


Q ss_pred             hhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHH
Q 017977          192 AKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVN  271 (363)
Q Consensus       192 ~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  271 (363)
                      .+|.+...|.+      .+..+ .. ..++++++++|+.+.++.......... .......++      ..+..++|+++
T Consensus       154 ~sK~a~~~~~~------~l~~~-~~-~~~i~v~~v~pg~~~t~~~~~~~~~~~-~~~~~~~~~------~~~~~~~~va~  218 (245)
T PRK12824        154 AAKAGMIGFTK------ALASE-GA-RYGITVNCIAPGYIATPMVEQMGPEVL-QSIVNQIPM------KRLGTPEEIAA  218 (245)
T ss_pred             HHHHHHHHHHH------HHHHH-HH-HhCeEEEEEEEcccCCcchhhcCHHHH-HHHHhcCCC------CCCCCHHHHHH
Confidence            54322222211      11111 11 238999999999998774322111110 011111121      23567899999


Q ss_pred             HHHHHhcCCC---CCceEEeeCCCC
Q 017977          272 LIYEALSNPS---YRGVINGTAPNP  293 (363)
Q Consensus       272 a~~~~~~~~~---~~g~~~i~~~~~  293 (363)
                      ++..++....   .+..+++.++..
T Consensus       219 ~~~~l~~~~~~~~~G~~~~~~~g~~  243 (245)
T PRK12824        219 AVAFLVSEAAGFITGETISINGGLY  243 (245)
T ss_pred             HHHHHcCccccCccCcEEEECCCee
Confidence            9988885433   344888888754

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.72  E-value=2.7e-16  Score=135.70  Aligned_cols=215  Identities=14%  Similarity=0.119  Sum_probs=135.8

Q ss_pred             EEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCc-ccc----cCCCCCccccCcccccCcchHHhhcc-------CCCEE
Q 017977           53 VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK-AEL----IFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAV  120 (363)
Q Consensus        53 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~----~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~V  120 (363)
                      |+|||++|+||+++++.|+++|++|++++|+..+ ...    +...........+|+.|.+++.++++       .+|+|
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL   80 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            6899999999999999999999999999987622 111    11111112245679998888877664       46999


Q ss_pred             EEccCCCCC---CCCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhhhh
Q 017977          121 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVY  195 (363)
Q Consensus       121 i~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~  195 (363)
                      ||+++....   .....+..+..+++|+.++.++++++.+.  ..+.+++|++||.++++|       .+..+.|...| 
T Consensus        81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g-------~~~~~~y~~~k-  152 (239)
T TIGR01830        81 VNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMG-------NAGQANYAASK-  152 (239)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCC-------CCCCchhHHHH-
Confidence            999997432   12344567788999999999999988752  134567999999756665       22233454443 


Q ss_pred             hcccchhhHHHHHHHHHHHhc--cCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHH
Q 017977          196 CLVSFNRGVLVCREWEGTALK--VNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLI  273 (363)
Q Consensus       196 ~~~~y~~~k~~~~~~~~~~~~--~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~  273 (363)
                               .....+......  ...|+.+++++|+.+.++........... ......+.      ..+.+++|+++++
T Consensus       153 ---------~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~~~~~~~-~~~~~~~~------~~~~~~~~~a~~~  216 (239)
T TIGR01830       153 ---------AGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTDKLSEKVKK-KILSQIPL------GRFGTPEEVANAV  216 (239)
T ss_pred             ---------HHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhhhcChHHHH-HHHhcCCc------CCCcCHHHHHHHH
Confidence                     222222111111  12389999999998866532211111100 11111111      2367899999999


Q ss_pred             HHHhcCCC--CCc-eEEeeCC
Q 017977          274 YEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       274 ~~~~~~~~--~~g-~~~i~~~  291 (363)
                      +.++....  ..| +|++.++
T Consensus       217 ~~~~~~~~~~~~g~~~~~~~g  237 (239)
T TIGR01830       217 AFLASDEASYITGQVIHVDGG  237 (239)
T ss_pred             HHHhCcccCCcCCCEEEeCCC
Confidence            98885533  233 8888654

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.72  E-value=4e-16  Score=136.27  Aligned_cols=221  Identities=12%  Similarity=0.108  Sum_probs=137.0

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCccccc----CCCCCccccCcccccCcchHHhhcc-------CC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (363)
                      ..++||||||+|+||+++++.|+++|++|++++|+. ..+..    ...........+|+.+.+++..+++       ++
T Consensus        14 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i   92 (258)
T PRK06935         14 DGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGT-NWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKI   92 (258)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCc-HHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            346899999999999999999999999999999973 22111    1111112245689998888776665       67


Q ss_pred             CEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhh
Q 017977          118 TAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCA  192 (363)
Q Consensus       118 d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~  192 (363)
                      |++||++|.....   ....+..+..+++|+.++..+.+++.+.  ..+..++|++||..+..+       .+..+.|..
T Consensus        93 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------~~~~~~Y~a  165 (258)
T PRK06935         93 DILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQG-------GKFVPAYTA  165 (258)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccC-------CCCchhhHH
Confidence            9999999964321   2234566788999999988777666542  144567999999843222       122345555


Q ss_pred             hhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHH-HHHHhCCCCCCCCCccccccHHHHHH
Q 017977          193 KVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPL-FMMFAGGPLGSGQQWFSWIHLDDIVN  271 (363)
Q Consensus       193 ~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~v~D~a~  271 (363)
                      +|.+...|.++       ....+. ..|++++.++||.+..+........... .......+.      ..+...+|+|+
T Consensus       166 sK~a~~~~~~~-------la~e~~-~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~dva~  231 (258)
T PRK06935        166 SKHGVAGLTKA-------FANELA-AYNIQVNAIAPGYIKTANTAPIRADKNRNDEILKRIPA------GRWGEPDDLMG  231 (258)
T ss_pred             HHHHHHHHHHH-------HHHHhh-hhCeEEEEEEeccccccchhhcccChHHHHHHHhcCCC------CCCCCHHHHHH
Confidence            54332222211       011111 2389999999999887642211000000 011111111      23678899999


Q ss_pred             HHHHHhcCCC--CCc-eEEeeCC
Q 017977          272 LIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       272 a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      ++..++....  ..| ++.+.++
T Consensus       232 ~~~~l~s~~~~~~~G~~i~~dgg  254 (258)
T PRK06935        232 AAVFLASRASDYVNGHILAVDGG  254 (258)
T ss_pred             HHHHHcChhhcCCCCCEEEECCC
Confidence            9999887543  344 6666655

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.72  E-value=7.2e-16  Score=135.93  Aligned_cols=222  Identities=22%  Similarity=0.232  Sum_probs=151.9

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCCCCCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGT  130 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~~~~~  130 (363)
                      |+||||||||++|++++++|+++|++|+++.|++.......   ........|+.+...+...++++|.++++.+... .
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~---~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~~~~~-~   76 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA---GGVEVVLGDLRDPKSLVAGAKGVDGVLLISGLLD-G   76 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc---CCcEEEEeccCCHhHHHHHhccccEEEEEecccc-c
Confidence            58999999999999999999999999999999998876665   2222556789999999999999999999988632 1


Q ss_pred             CCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhcccchhhHHHHHHH
Q 017977          131 RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRGVLVCREW  210 (363)
Q Consensus       131 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~~y~~~k~~~~~~  210 (363)
                      ..      ...........+..+++.   .+.++++++|..+.         +......|...             +...
T Consensus        77 ~~------~~~~~~~~~~~~~a~~a~---~~~~~~~~~s~~~~---------~~~~~~~~~~~-------------~~~~  125 (275)
T COG0702          77 SD------AFRAVQVTAVVRAAEAAG---AGVKHGVSLSVLGA---------DAASPSALARA-------------KAAV  125 (275)
T ss_pred             cc------chhHHHHHHHHHHHHHhc---CCceEEEEeccCCC---------CCCCccHHHHH-------------HHHH
Confidence            10      112222233333333333   24677888877621         11111233322             2223


Q ss_pred             HHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCC-CCCCCccccccHHHHHHHHHHHhcCCC-CCceEEe
Q 017977          211 EGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPL-GSGQQWFSWIHLDDIVNLIYEALSNPS-YRGVING  288 (363)
Q Consensus       211 ~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~D~a~a~~~~~~~~~-~~g~~~i  288 (363)
                      +...  ...|++++++|+..+|.......    .......+.++ ..+....+++..+|++.++..++..+. ...+|.+
T Consensus       126 e~~l--~~sg~~~t~lr~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~d~a~~~~~~l~~~~~~~~~~~l  199 (275)
T COG0702         126 EAAL--RSSGIPYTTLRRAAFYLGAGAAF----IEAAEAAGLPVIPRGIGRLSPIAVDDVAEALAAALDAPATAGRTYEL  199 (275)
T ss_pred             HHHH--HhcCCCeEEEecCeeeeccchhH----HHHHHhhCCceecCCCCceeeeEHHHHHHHHHHHhcCCcccCcEEEc
Confidence            3322  23499999999877776543221    11122233332 222336789999999999999998775 4459999


Q ss_pred             eCCCCcCHHHHHHHHHHHhCCCCCC
Q 017977          289 TAPNPVRLAEMCDHLGNVLGRPSWL  313 (363)
Q Consensus       289 ~~~~~~s~~el~~~i~~~~g~~~~~  313 (363)
                      ++++..+..++++.+.+..|++..+
T Consensus       200 ~g~~~~~~~~~~~~l~~~~gr~~~~  224 (275)
T COG0702         200 AGPEALTLAELASGLDYTIGRPVGL  224 (275)
T ss_pred             cCCceecHHHHHHHHHHHhCCccee
Confidence            9998999999999999999998544

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.72  E-value=7.4e-16  Score=134.12  Aligned_cols=219  Identities=16%  Similarity=0.027  Sum_probs=135.8

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCC----CCCccccCcccccCcchHHhhcc-------CCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GST  118 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~d  118 (363)
                      .++|+||||+|+||.+++++|+++|++|++++|+....+....    .........+|+.+.+++..+++       .+|
T Consensus         8 ~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   87 (252)
T PRK07035          8 GKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRLD   87 (252)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            4689999999999999999999999999999998654332211    11111244578888887765554       589


Q ss_pred             EEEEccCCCCC----CCCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhh
Q 017977          119 AVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCA  192 (363)
Q Consensus       119 ~Vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~  192 (363)
                      +|||+|+....    .....+..+..+++|+.++..+++++.+.  ..+..++|++||..+..+       .+..+.|..
T Consensus        88 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-------~~~~~~Y~~  160 (252)
T PRK07035         88 ILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSP-------GDFQGIYSI  160 (252)
T ss_pred             EEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCC-------CCCCcchHH
Confidence            99999985311    12344556778999999998888777432  145567999988744322       223334555


Q ss_pred             hhhhcccchhhHHHHHHHHHHHhc--cCCCceEEEEeeceEEeCCCCcccchHHHHHH-HhCCCCCCCCCccccccHHHH
Q 017977          193 KVYCLVSFNRGVLVCREWEGTALK--VNKDVRLALIRIGIVLGKDGGALAKMIPLFMM-FAGGPLGSGQQWFSWIHLDDI  269 (363)
Q Consensus       193 ~~~~~~~y~~~k~~~~~~~~~~~~--~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~D~  269 (363)
                      +|.+          ...+......  ...|++++.+.||.+..+.......-...+.. ....+.      ..+..++|+
T Consensus       161 sK~a----------l~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~v  224 (252)
T PRK07035        161 TKAA----------VISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKNDAILKQALAHIPL------RRHAEPSEM  224 (252)
T ss_pred             HHHH----------HHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCCHHHHHHHHccCCC------CCcCCHHHH
Confidence            4432          2222222111  12389999999999876532111000111111 111111      236779999


Q ss_pred             HHHHHHHhcCCC--CCc-eEEeeCC
Q 017977          270 VNLIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       270 a~a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      |+++..++.+..  ..| .+.+.++
T Consensus       225 a~~~~~l~~~~~~~~~g~~~~~dgg  249 (252)
T PRK07035        225 AGAVLYLASDASSYTTGECLNVDGG  249 (252)
T ss_pred             HHHHHHHhCccccCccCCEEEeCCC
Confidence            999999987654  344 5555543

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.71  E-value=4.4e-16  Score=135.78  Aligned_cols=220  Identities=15%  Similarity=0.075  Sum_probs=140.3

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccC----CCCCccccCcccccCcchHHhhcc-------CC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (363)
                      .+++|+||||+|+||+++++.|+++|++|++++|+....+...    ..........+|+.+.+++.++++       ++
T Consensus        10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   89 (255)
T PRK06113         10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGKV   89 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            3579999999999999999999999999999999765533221    111112244689999888766543       57


Q ss_pred             CEEEEccCCCCCC--CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhh
Q 017977          118 TAVVNLAGTPIGT--RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAK  193 (363)
Q Consensus       118 d~Vi~~a~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~  193 (363)
                      |+|||+|+.....  ....+..+..+++|+.++.++++++...  ..+..++|++||..+..+       .+....|..+
T Consensus        90 d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-------~~~~~~Y~~s  162 (255)
T PRK06113         90 DILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENK-------NINMTSYASS  162 (255)
T ss_pred             CEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCC-------CCCcchhHHH
Confidence            9999999964321  2334556777999999999999998632  134457999999843221       2223345555


Q ss_pred             hhhcccchhhHHHHHHHHHHHhc--cCCCceEEEEeeceEEeCCCCcccchHHHH--HHHhCCCCCCCCCccccccHHHH
Q 017977          194 VYCLVSFNRGVLVCREWEGTALK--VNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPLGSGQQWFSWIHLDDI  269 (363)
Q Consensus       194 ~~~~~~y~~~k~~~~~~~~~~~~--~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~v~D~  269 (363)
                      |.+...+.          .....  ...++.++++.|+.+..+.....  ..+.+  ......++      ..+..++|+
T Consensus       163 K~a~~~~~----------~~la~~~~~~~i~v~~v~pg~~~t~~~~~~--~~~~~~~~~~~~~~~------~~~~~~~d~  224 (255)
T PRK06113        163 KAAASHLV----------RNMAFDLGEKNIRVNGIAPGAILTDALKSV--ITPEIEQKMLQHTPI------RRLGQPQDI  224 (255)
T ss_pred             HHHHHHHH----------HHHHHHhhhhCeEEEEEecccccccccccc--cCHHHHHHHHhcCCC------CCCcCHHHH
Confidence            43322222          11111  12389999999999876642211  11111  11111121      236789999


Q ss_pred             HHHHHHHhcCCC--CCc-eEEeeCCCC
Q 017977          270 VNLIYEALSNPS--YRG-VINGTAPNP  293 (363)
Q Consensus       270 a~a~~~~~~~~~--~~g-~~~i~~~~~  293 (363)
                      ++++..++....  ..| .+++.++..
T Consensus       225 a~~~~~l~~~~~~~~~G~~i~~~gg~~  251 (255)
T PRK06113        225 ANAALFLCSPAASWVSGQILTVSGGGV  251 (255)
T ss_pred             HHHHHHHcCccccCccCCEEEECCCcc
Confidence            999999987543  344 777777643

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.71  E-value=2.4e-16  Score=137.84  Aligned_cols=222  Identities=13%  Similarity=0.047  Sum_probs=138.5

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCC------CCCccccCcccccCcchHHhhcc-------
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP------GKKTRFFPGVMIAEEPQWRDCIQ-------  115 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~-------  115 (363)
                      ..++|+||||+|+||+++++.|+++|++|++++|+.+..+....      .........+|+.|.+++.++++       
T Consensus         6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   85 (260)
T PRK07063          6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFG   85 (260)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            34689999999999999999999999999999998765432211      11112244679999888877664       


Q ss_pred             CCCEEEEccCCCCC---CCCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcch
Q 017977          116 GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDY  190 (363)
Q Consensus       116 ~~d~Vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~  190 (363)
                      .+|++||+||....   .....+..+..+++|+.++..+++++.+.  ..+..++|++||..+..+       .+....|
T Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------~~~~~~Y  158 (260)
T PRK07063         86 PLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKI-------IPGCFPY  158 (260)
T ss_pred             CCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccC-------CCCchHH
Confidence            68999999996422   12344566788999999998888887642  134467999998843221       2223345


Q ss_pred             hhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc-c---chHHHHH-HHhCCCCCCCCCcccccc
Q 017977          191 CAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL-A---KMIPLFM-MFAGGPLGSGQQWFSWIH  265 (363)
Q Consensus       191 ~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~-~---~~~~~~~-~~~~~~~~~~~~~~~~i~  265 (363)
                      ..+|.+...+.++       ....+. ..|++++.++||.+-.+..... .   ....... .....+.      ..+..
T Consensus       159 ~~sKaa~~~~~~~-------la~el~-~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~------~r~~~  224 (260)
T PRK07063        159 PVAKHGLLGLTRA-------LGIEYA-ARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPM------KRIGR  224 (260)
T ss_pred             HHHHHHHHHHHHH-------HHHHhC-ccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCCC------CCCCC
Confidence            5554332222211       111111 2389999999999876532110 0   0000011 1111111      12567


Q ss_pred             HHHHHHHHHHHhcCCC--CCc-eEEeeCC
Q 017977          266 LDDIVNLIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       266 v~D~a~a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      .+|+|++++.++....  ..| .+.+.+|
T Consensus       225 ~~~va~~~~fl~s~~~~~itG~~i~vdgg  253 (260)
T PRK07063        225 PEEVAMTAVFLASDEAPFINATCITIDGG  253 (260)
T ss_pred             HHHHHHHHHHHcCccccccCCcEEEECCC
Confidence            9999999999987643  445 5555554

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.71  E-value=6.3e-16  Score=134.90  Aligned_cols=220  Identities=15%  Similarity=0.107  Sum_probs=138.8

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccC----CCCCccccCcccccCcchHHhhcc-------CC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (363)
                      .+++|+||||+|+||+++++.|+++|++|++++|+........    ..........+|+.+.+++..+++       .+
T Consensus        10 ~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   89 (256)
T PRK06124         10 AGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGRL   89 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            4579999999999999999999999999999999875433221    111112245679998887776654       46


Q ss_pred             CEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhh
Q 017977          118 TAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCA  192 (363)
Q Consensus       118 d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~  192 (363)
                      |+|||+++.....   ....+..+..+++|+.++.++.+++.+.  ..+..++|++||..+.++       .+....|..
T Consensus        90 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~-------~~~~~~Y~~  162 (256)
T PRK06124         90 DILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVA-------RAGDAVYPA  162 (256)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccC-------CCCccHhHH
Confidence            9999999964321   2334556778999999998888666532  145677999998844332       122335555


Q ss_pred             hhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc---cchHHHHHHHhCCCCCCCCCccccccHHHH
Q 017977          193 KVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL---AKMIPLFMMFAGGPLGSGQQWFSWIHLDDI  269 (363)
Q Consensus       193 ~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  269 (363)
                      +|.....|.++      +..+ +. ..++++..++|+.+.++.....   ..+...+  ....+.      ..+++++|+
T Consensus       163 sK~a~~~~~~~------la~e-~~-~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~--~~~~~~------~~~~~~~~~  226 (256)
T PRK06124        163 AKQGLTGLMRA------LAAE-FG-PHGITSNAIAPGYFATETNAAMAADPAVGPWL--AQRTPL------GRWGRPEEI  226 (256)
T ss_pred             HHHHHHHHHHH------HHHH-HH-HhCcEEEEEEECCccCcchhhhccChHHHHHH--HhcCCC------CCCCCHHHH
Confidence            54332222211      1111 11 1389999999999998752211   1111111  111111      237899999


Q ss_pred             HHHHHHHhcCCC--CCc-eEEeeCC
Q 017977          270 VNLIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       270 a~a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      +++++.++....  ..| .+.+.++
T Consensus       227 a~~~~~l~~~~~~~~~G~~i~~dgg  251 (256)
T PRK06124        227 AGAAVFLASPAASYVNGHVLAVDGG  251 (256)
T ss_pred             HHHHHHHcCcccCCcCCCEEEECCC
Confidence            999999997654  345 4444443

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.71  E-value=2.3e-16  Score=136.57  Aligned_cols=197  Identities=12%  Similarity=0.026  Sum_probs=130.5

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCC-----CCccccCcccccCcchHHhhcc----CCCEE
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KKTRFFPGVMIAEEPQWRDCIQ----GSTAV  120 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~----~~d~V  120 (363)
                      ||+|+||||+|+||+++++.|+++|++|++++|+.++.+.....     .....+..+|+.+.+++.++++    .+|+|
T Consensus         1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~v   80 (243)
T PRK07102          1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDIV   80 (243)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCEE
Confidence            46899999999999999999999999999999988654332110     1112245679999888877665    46999


Q ss_pred             EEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhhhh
Q 017977          121 VNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVY  195 (363)
Q Consensus       121 i~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~  195 (363)
                      ||++|.....   ..+.+.....+++|+.++.++++++...  ..+.+++|++||..+.++       .+....|..+  
T Consensus        81 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-------~~~~~~Y~~s--  151 (243)
T PRK07102         81 LIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRG-------RASNYVYGSA--  151 (243)
T ss_pred             EECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCC-------CCCCcccHHH--
Confidence            9999864332   2234455678899999999998887652  135677999998844322       1222234443  


Q ss_pred             hcccchhhHHHHHHHHHHHhc--cCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHH
Q 017977          196 CLVSFNRGVLVCREWEGTALK--VNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLI  273 (363)
Q Consensus       196 ~~~~y~~~k~~~~~~~~~~~~--~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~  273 (363)
                              |.....+......  ...|+++++++|+.+.++....             ...  +  ..-+..++|+++++
T Consensus       152 --------K~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~-------------~~~--~--~~~~~~~~~~a~~i  206 (243)
T PRK07102        152 --------KAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAG-------------LKL--P--GPLTAQPEEVAKDI  206 (243)
T ss_pred             --------HHHHHHHHHHHHHHhhccCcEEEEEecCcccChhhhc-------------cCC--C--ccccCCHHHHHHHH
Confidence                    3222222222111  1248999999999998763211             000  0  11257799999999


Q ss_pred             HHHhcCC
Q 017977          274 YEALSNP  280 (363)
Q Consensus       274 ~~~~~~~  280 (363)
                      +.+++++
T Consensus       207 ~~~~~~~  213 (243)
T PRK07102        207 FRAIEKG  213 (243)
T ss_pred             HHHHhCC
Confidence            9999864

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.71  E-value=5.3e-16  Score=135.09  Aligned_cols=218  Identities=14%  Similarity=0.068  Sum_probs=134.5

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCc-ccccCCC-CCccccCcccccCcchHHhhccC--------CCE
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK-AELIFPG-KKTRFFPGVMIAEEPQWRDCIQG--------STA  119 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~--------~d~  119 (363)
                      .++++||||+|+||+++++.|+++|++|+++.++... ...+... ........+|+.+.+++.+++++        +|+
T Consensus         5 ~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id~   84 (253)
T PRK08642          5 EQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPITT   84 (253)
T ss_pred             CCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCeE
Confidence            3689999999999999999999999999887664322 2211110 01122446799988888776642        899


Q ss_pred             EEEccCCCC---------CCCCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCc
Q 017977          120 VVNLAGTPI---------GTRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLS  188 (363)
Q Consensus       120 Vi~~a~~~~---------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~  188 (363)
                      |||+|+...         ....+.+.....+++|+.++.++++++...  ..+..++|++||... ..      ...+.+
T Consensus        85 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~-~~------~~~~~~  157 (253)
T PRK08642         85 VVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLF-QN------PVVPYH  157 (253)
T ss_pred             EEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccc-cC------CCCCcc
Confidence            999998521         112234556778999999999999998642  134567999998621 11      111223


Q ss_pred             chhhhhhhcccchhhHHHHHHHHHHHhcc--CCCceEEEEeeceEEeCCCCcccchHHHHHHH-hCCCCCCCCCcccccc
Q 017977          189 DYCAKVYCLVSFNRGVLVCREWEGTALKV--NKDVRLALIRIGIVLGKDGGALAKMIPLFMMF-AGGPLGSGQQWFSWIH  265 (363)
Q Consensus       189 ~~~~~~~~~~~y~~~k~~~~~~~~~~~~~--~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~  265 (363)
                      .|..+|.          ....+.+.....  ..++.++.++||.+..+....... -...... ...++      ..+.+
T Consensus       158 ~Y~~sK~----------a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~~-~~~~~~~~~~~~~------~~~~~  220 (253)
T PRK08642        158 DYTTAKA----------ALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAATP-DEVFDLIAATTPL------RKVTT  220 (253)
T ss_pred             chHHHHH----------HHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccCC-HHHHHHHHhcCCc------CCCCC
Confidence            4555432          322222222111  238999999999987653211100 0111111 11121      24789


Q ss_pred             HHHHHHHHHHHhcCCC--CCc-eEEeeCC
Q 017977          266 LDDIVNLIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       266 v~D~a~a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      ++|+|+++..++....  ..| .+.+.++
T Consensus       221 ~~~va~~~~~l~~~~~~~~~G~~~~vdgg  249 (253)
T PRK08642        221 PQEFADAVLFFASPWARAVTGQNLVVDGG  249 (253)
T ss_pred             HHHHHHHHHHHcCchhcCccCCEEEeCCC
Confidence            9999999999997543  444 6666655

>PRK09242 tropinone reductase; Provisional

Probab=99.71  E-value=7e-16  Score=134.69  Aligned_cols=221  Identities=12%  Similarity=0.078  Sum_probs=138.1

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCC------CCccccCcccccCcchHHhhcc-------C
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG------KKTRFFPGVMIAEEPQWRDCIQ-------G  116 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~~~-------~  116 (363)
                      .++++||||+|+||+++++.|+++|++|++++|+.+..+.....      ........+|+.+.+++.++++       +
T Consensus         9 ~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   88 (257)
T PRK09242          9 GQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWDG   88 (257)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999999999999999987554322111      1112234579988877665543       5


Q ss_pred             CCEEEEccCCCCC---CCCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchh
Q 017977          117 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYC  191 (363)
Q Consensus       117 ~d~Vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~  191 (363)
                      +|+|||+||....   .....+..+..+++|+.++.++++++.+.  ..+..++|++||.++..+       .+....|.
T Consensus        89 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~-------~~~~~~Y~  161 (257)
T PRK09242         89 LHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTH-------VRSGAPYG  161 (257)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCC-------CCCCcchH
Confidence            7999999996322   23355667888999999999998887532  134567999999843221       22334555


Q ss_pred             hhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHH-HHHhCCCCCCCCCccccccHHHHH
Q 017977          192 AKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIV  270 (363)
Q Consensus       192 ~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a  270 (363)
                      .+|.....|.++  ++.+     +. ..+++++.++|+.+.++............ ......++      .-+...+|++
T Consensus       162 ~sK~a~~~~~~~--la~e-----~~-~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~va  227 (257)
T PRK09242        162 MTKAALLQMTRN--LAVE-----WA-EDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPM------RRVGEPEEVA  227 (257)
T ss_pred             HHHHHHHHHHHH--HHHH-----HH-HhCeEEEEEEECCCCCcccccccCChHHHHHHHhcCCC------CCCcCHHHHH
Confidence            554333222211  0111     11 23899999999999887532211111111 11111121      1245789999


Q ss_pred             HHHHHHhcCCC--CCc-eEEeeCC
Q 017977          271 NLIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       271 ~a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      .++..++....  ..| .+.+.++
T Consensus       228 ~~~~~l~~~~~~~~~g~~i~~~gg  251 (257)
T PRK09242        228 AAVAFLCMPAASYITGQCIAVDGG  251 (257)
T ss_pred             HHHHHHhCcccccccCCEEEECCC
Confidence            99999886532  234 5555543

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.71  E-value=1.1e-15  Score=133.44  Aligned_cols=224  Identities=10%  Similarity=0.010  Sum_probs=134.2

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCccc----cc----CCCCCccccCcccccCcchHHhhcc------
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE----LI----FPGKKTRFFPGVMIAEEPQWRDCIQ------  115 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~~----~~~~~~~~~~~~d~~~~~~~~~~~~------  115 (363)
                      .++++||||+|+||+++++.|+++|++|++++++.....    ..    ...........+|+.+.+++.++++      
T Consensus         8 ~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (257)
T PRK12744          8 GKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAAF   87 (257)
T ss_pred             CcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHhh
Confidence            468999999999999999999999999888876543211    11    0011112244689999888876654      


Q ss_pred             -CCCEEEEccCCCCC---CCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEe-ccceecCCcccccccCCCcch
Q 017977          116 -GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLEL-VKPKYLMRAAHQEMITWLSDY  190 (363)
Q Consensus       116 -~~d~Vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~S-S~~~~yg~~~~~e~~~~~~~~  190 (363)
                       ++|+|||+||....   .....+..+..+++|+.++..+++++.+......++++++ |..+.+.        +....|
T Consensus        88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~~--------~~~~~Y  159 (257)
T PRK12744         88 GRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAFT--------PFYSAY  159 (257)
T ss_pred             CCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcccC--------CCcccc
Confidence             57999999997432   2234556778899999999999999876311234577664 3323221        222345


Q ss_pred             hhhhhhcccchhhHHHHHHHHHHHhcc--CCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHH
Q 017977          191 CAKVYCLVSFNRGVLVCREWEGTALKV--NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDD  268 (363)
Q Consensus       191 ~~~~~~~~~y~~~k~~~~~~~~~~~~~--~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  268 (363)
                      ..+|.+          ...........  ..++++++++||.+.++....... ..............+.....+.+++|
T Consensus       160 ~~sK~a----------~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d  228 (257)
T PRK12744        160 AGSKAP----------VEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEG-AEAVAYHKTAAALSPFSKTGLTDIED  228 (257)
T ss_pred             hhhHHH----------HHHHHHHHHHHhCcCceEEEEEecCccccchhccccc-cchhhcccccccccccccCCCCCHHH
Confidence            444322          22222111111  138999999999997763211100 00000000000011111224789999


Q ss_pred             HHHHHHHHhcCCC-CCc-eEEeeCCC
Q 017977          269 IVNLIYEALSNPS-YRG-VINGTAPN  292 (363)
Q Consensus       269 ~a~a~~~~~~~~~-~~g-~~~i~~~~  292 (363)
                      +|+++..+++... ..| ++++.++.
T Consensus       229 va~~~~~l~~~~~~~~g~~~~~~gg~  254 (257)
T PRK12744        229 IVPFIRFLVTDGWWITGQTILINGGY  254 (257)
T ss_pred             HHHHHHHhhcccceeecceEeecCCc
Confidence            9999999998533 234 77777764

>PRK12742 oxidoreductase; Provisional

Probab=99.71  E-value=8.9e-16  Score=132.33  Aligned_cols=218  Identities=11%  Similarity=0.039  Sum_probs=133.5

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCC-CcccccCCCCCccccCcccccCcchHHhhcc---CCCEEEEcc
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR-SKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ---GSTAVVNLA  124 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~~d~Vi~~a  124 (363)
                      ++++|+||||+|+||+++++.|+++|++|+++.|+. ...+.+..... .....+|+.|.+++.+.++   ++|+|||+|
T Consensus         5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~-~~~~~~D~~~~~~~~~~~~~~~~id~li~~a   83 (237)
T PRK12742          5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETG-ATAVQTDSADRDAVIDVVRKSGALDILVVNA   83 (237)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhC-CeEEecCCCCHHHHHHHHHHhCCCcEEEECC
Confidence            346899999999999999999999999998887643 22222211111 1134578888777766654   489999999


Q ss_pred             CCCCC---CCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhcccch
Q 017977          125 GTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVSFN  201 (363)
Q Consensus       125 ~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~~y~  201 (363)
                      |....   ...+.+..+..+++|+.++..++..+.+......++|++||..+..      ...+....|..+        
T Consensus        84 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~------~~~~~~~~Y~~s--------  149 (237)
T PRK12742         84 GIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDR------MPVAGMAAYAAS--------  149 (237)
T ss_pred             CCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecccccc------CCCCCCcchHHh--------
Confidence            87432   1234556788999999999999777666312345799999873211      011223345444        


Q ss_pred             hhHHHHHHHHHHHhc--cCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHHHHHhcC
Q 017977          202 RGVLVCREWEGTALK--VNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN  279 (363)
Q Consensus       202 ~~k~~~~~~~~~~~~--~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~  279 (363)
                        |............  ...|+.+++++||.+..+...........  .....++      ..+...+|+++++..++..
T Consensus       150 --Kaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~--~~~~~~~------~~~~~p~~~a~~~~~l~s~  219 (237)
T PRK12742        150 --KSALQGMARGLARDFGPRGITINVVQPGPIDTDANPANGPMKDM--MHSFMAI------KRHGRPEEVAGMVAWLAGP  219 (237)
T ss_pred             --HHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCccccccHHHHH--HHhcCCC------CCCCCHHHHHHHHHHHcCc
Confidence              3222222222111  12389999999999977643211111111  1111111      1357899999999999875


Q ss_pred             CC--CCc-eEEeeCC
Q 017977          280 PS--YRG-VINGTAP  291 (363)
Q Consensus       280 ~~--~~g-~~~i~~~  291 (363)
                      ..  ..| .+.+.++
T Consensus       220 ~~~~~~G~~~~~dgg  234 (237)
T PRK12742        220 EASFVTGAMHTIDGA  234 (237)
T ss_pred             ccCcccCCEEEeCCC
Confidence            43  345 5555443

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.71  E-value=4.1e-16  Score=140.32  Aligned_cols=209  Identities=12%  Similarity=0.082  Sum_probs=134.3

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCC----CCCccccCcccccCcchHHhhc-------cCC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCI-------QGS  117 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~-------~~~  117 (363)
                      ..++|+||||+|+||+++++.|+++|++|++++|+....+....    .........+|+.|.+++.+++       .++
T Consensus         6 ~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   85 (330)
T PRK06139          6 HGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGRI   85 (330)
T ss_pred             CCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            34689999999999999999999999999999998765433211    1111223457999988887765       368


Q ss_pred             CEEEEccCCCCCCC---CChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhh
Q 017977          118 TAVVNLAGTPIGTR---WSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCA  192 (363)
Q Consensus       118 d~Vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~  192 (363)
                      |++|||||......   ...+..+..+++|+.++.++.+++...  ..+..++|++||.++..+       .+....|..
T Consensus        86 D~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~-------~p~~~~Y~a  158 (330)
T PRK06139         86 DVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAA-------QPYAAAYSA  158 (330)
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCC-------CCCchhHHH
Confidence            99999999643322   234556778999999998887776532  134457888888743221       222335555


Q ss_pred             hhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHH
Q 017977          193 KVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL  272 (363)
Q Consensus       193 ~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a  272 (363)
                      +|.....|..      .+..+ +....++.++.+.|+.+.++........       .+...   .....+++++|+|++
T Consensus       159 sKaal~~~~~------sL~~E-l~~~~gI~V~~v~Pg~v~T~~~~~~~~~-------~~~~~---~~~~~~~~pe~vA~~  221 (330)
T PRK06139        159 SKFGLRGFSE------ALRGE-LADHPDIHVCDVYPAFMDTPGFRHGANY-------TGRRL---TPPPPVYDPRRVAKA  221 (330)
T ss_pred             HHHHHHHHHH------HHHHH-hCCCCCeEEEEEecCCccCccccccccc-------ccccc---cCCCCCCCHHHHHHH
Confidence            5433322221      11111 1111389999999999988743211110       01111   111236789999999


Q ss_pred             HHHHhcCCC
Q 017977          273 IYEALSNPS  281 (363)
Q Consensus       273 ~~~~~~~~~  281 (363)
                      ++.+++++.
T Consensus       222 il~~~~~~~  230 (330)
T PRK06139        222 VVRLADRPR  230 (330)
T ss_pred             HHHHHhCCC
Confidence            999998754

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.71  E-value=6.5e-16  Score=134.39  Aligned_cols=198  Identities=13%  Similarity=0.083  Sum_probs=125.9

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCC-CEEEEEeCCCCc-ccc----cCCCCC-ccccCcccccCcchHHhhcc------
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSK-AEL----IFPGKK-TRFFPGVMIAEEPQWRDCIQ------  115 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~-~~~----~~~~~~-~~~~~~~d~~~~~~~~~~~~------  115 (363)
                      +.++|+||||+|+||++++++|+++| ++|++++|++++ .+.    +..... ...+..+|+.|.+++.+.++      
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~g   86 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAGG   86 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhcC
Confidence            45689999999999999999999985 999999998875 221    211111 22355689988887654443      


Q ss_pred             CCCEEEEccCCCCCCC--C-ChhhHHHHHHHHHHHHHH----HHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCc
Q 017977          116 GSTAVVNLAGTPIGTR--W-SSEIKKEIKESRIRVTSK----VVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLS  188 (363)
Q Consensus       116 ~~d~Vi~~a~~~~~~~--~-~~~~~~~~~~~n~~~~~~----l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~  188 (363)
                      ++|++||++|......  + ......+.+++|+.++..    +++.+.+  .+..++|++||..+..+       .+...
T Consensus        87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~--~~~~~iv~isS~~g~~~-------~~~~~  157 (253)
T PRK07904         87 DVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRA--QGFGQIIAMSSVAGERV-------RRSNF  157 (253)
T ss_pred             CCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHh--cCCceEEEEechhhcCC-------CCCCc
Confidence            6899999998742211  1 112223568999998776    4556655  56678999999843111       22333


Q ss_pred             chhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHH
Q 017977          189 DYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDD  268 (363)
Q Consensus       189 ~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  268 (363)
                      .|..+|.....|.+      .+..+ . ...++++++++|+.+..+.....          ..        ....+..+|
T Consensus       158 ~Y~~sKaa~~~~~~------~l~~e-l-~~~~i~v~~v~Pg~v~t~~~~~~----------~~--------~~~~~~~~~  211 (253)
T PRK07904        158 VYGSTKAGLDGFYL------GLGEA-L-REYGVRVLVVRPGQVRTRMSAHA----------KE--------APLTVDKED  211 (253)
T ss_pred             chHHHHHHHHHHHH------HHHHH-H-hhcCCEEEEEeeCceecchhccC----------CC--------CCCCCCHHH
Confidence            45555432222221      11111 1 12489999999999987522110          00        012478999


Q ss_pred             HHHHHHHHhcCCC
Q 017977          269 IVNLIYEALSNPS  281 (363)
Q Consensus       269 ~a~a~~~~~~~~~  281 (363)
                      +|+.++..++++.
T Consensus       212 ~A~~i~~~~~~~~  224 (253)
T PRK07904        212 VAKLAVTAVAKGK  224 (253)
T ss_pred             HHHHHHHHHHcCC
Confidence            9999999998654

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=99.70  E-value=4.3e-16  Score=141.37  Aligned_cols=252  Identities=17%  Similarity=0.111  Sum_probs=161.7

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCC---CEEEEEeCCCCcccc---cC------------CC----CCccccCcccccC-
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADN---HQVRVLTRSRSKAEL---IF------------PG----KKTRFFPGVMIAE-  106 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~---~~------------~~----~~~~~~~~~d~~~-  106 (363)
                      .++|+|||||||+|+-|++.|+..-   -+++.+.|.....+.   +.            +.    ........+|+.+ 
T Consensus        12 ~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~~~   91 (467)
T KOG1221|consen   12 NKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDISEP   91 (467)
T ss_pred             CCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccccCc
Confidence            4689999999999999999999753   388888886643210   00            00    0111122345553 


Q ss_pred             -----cchHHhhccCCCEEEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC-----
Q 017977          107 -----EPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM-----  176 (363)
Q Consensus       107 -----~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg-----  176 (363)
                           ..+.....+++|+|||+|+.+   .+++ ..+....+|..|+.++++.|+++ ...+-++++|++.+.-.     
T Consensus        92 ~LGis~~D~~~l~~eV~ivih~AAtv---rFde-~l~~al~iNt~Gt~~~l~lak~~-~~l~~~vhVSTAy~n~~~~~i~  166 (467)
T KOG1221|consen   92 DLGISESDLRTLADEVNIVIHSAATV---RFDE-PLDVALGINTRGTRNVLQLAKEM-VKLKALVHVSTAYSNCNVGHIE  166 (467)
T ss_pred             ccCCChHHHHHHHhcCCEEEEeeeee---ccch-hhhhhhhhhhHhHHHHHHHHHHh-hhhheEEEeehhheeccccccc
Confidence                 345556778899999999974   2233 34567789999999999999997 67788999999863322     


Q ss_pred             Cccccccc--CCC----------cchhhh------hhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCc
Q 017977          177 RAAHQEMI--TWL----------SDYCAK------VYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA  238 (363)
Q Consensus       177 ~~~~~e~~--~~~----------~~~~~~------~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~  238 (363)
                      +.++.+..  ++.          ..+...      ..-...|+.+|   +..|........+++++|+||+.|.......
T Consensus       167 E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTK---al~E~~i~~~~~~lPivIiRPsiI~st~~EP  243 (467)
T KOG1221|consen  167 EKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTK---ALAEMVIQKEAENLPLVIIRPSIITSTYKEP  243 (467)
T ss_pred             ccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehH---hhHHHHHHhhccCCCeEEEcCCceeccccCC
Confidence            22222211  110          001000      01123455555   3344444444458999999999999875444


Q ss_pred             ccchHHHHHH--------HhCCC---CCCCCCccccccHHHHHHHHHHHhcC--CCC----CceEEeeCC--CCcCHHHH
Q 017977          239 LAKMIPLFMM--------FAGGP---LGSGQQWFSWIHLDDIVNLIYEALSN--PSY----RGVINGTAP--NPVRLAEM  299 (363)
Q Consensus       239 ~~~~~~~~~~--------~~~~~---~~~~~~~~~~i~v~D~a~a~~~~~~~--~~~----~g~~~i~~~--~~~s~~el  299 (363)
                      ...|+...+.        ++|.-   ..+.+...++|.+|.++.+++.+.-.  ...    ..+||++++  .+++|.++
T Consensus       244 ~pGWidn~~gp~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~tss~~Np~t~~~~  323 (467)
T KOG1221|consen  244 FPGWIDNLNGPDGVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHLTSSNDNPVTWGDF  323 (467)
T ss_pred             CCCccccCCCCceEEEEeccceEEEEEEccccccceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEecccccCcccHHHH
Confidence            4444332221        11111   15778889999999999999976621  111    239999986  67999999


Q ss_pred             HHHHHHHhCC
Q 017977          300 CDHLGNVLGR  309 (363)
Q Consensus       300 ~~~i~~~~g~  309 (363)
                      .+...+.+..
T Consensus       324 ~e~~~~~~~~  333 (467)
T KOG1221|consen  324 IELALRYFEK  333 (467)
T ss_pred             HHHHHHhccc
Confidence            9999998864

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.70  E-value=7.5e-16  Score=136.82  Aligned_cols=202  Identities=12%  Similarity=0.062  Sum_probs=130.0

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCC----CCCccccCcccccCcchHHhhcc-------CC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (363)
                      ..++|+||||+|+||+++++.|+++|++|++++|+.+..+....    .........+|+.|.+++.++++       ++
T Consensus        39 ~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i  118 (293)
T PRK05866         39 TGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGV  118 (293)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            34689999999999999999999999999999998755332211    11112244679999888877765       78


Q ss_pred             CEEEEccCCCCCCCC-----ChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcch
Q 017977          118 TAVVNLAGTPIGTRW-----SSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDY  190 (363)
Q Consensus       118 d~Vi~~a~~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~  190 (363)
                      |+|||+||.......     ..+..+..+++|+.++.++++++...  ..+..++|++||. +.++     +..+....|
T Consensus       119 d~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~-~~~~-----~~~p~~~~Y  192 (293)
T PRK05866        119 DILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATW-GVLS-----EASPLFSVY  192 (293)
T ss_pred             CEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECCh-hhcC-----CCCCCcchH
Confidence            999999997533221     12344678999999988887776521  1456789999987 3332     112233355


Q ss_pred             hhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHH
Q 017977          191 CAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIV  270 (363)
Q Consensus       191 ~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  270 (363)
                      ..+|.+...|.++       ....+. ..++++++++||.+-.+.......             ..   ....+..+++|
T Consensus       193 ~asKaal~~l~~~-------la~e~~-~~gI~v~~v~pg~v~T~~~~~~~~-------------~~---~~~~~~pe~vA  248 (293)
T PRK05866        193 NASKAALSAVSRV-------IETEWG-DRGVHSTTLYYPLVATPMIAPTKA-------------YD---GLPALTADEAA  248 (293)
T ss_pred             HHHHHHHHHHHHH-------HHHHhc-ccCcEEEEEEcCcccCcccccccc-------------cc---CCCCCCHHHHH
Confidence            5554332222211       111111 238999999999876653211000             00   11246899999


Q ss_pred             HHHHHHhcCC
Q 017977          271 NLIYEALSNP  280 (363)
Q Consensus       271 ~a~~~~~~~~  280 (363)
                      +.++.++++.
T Consensus       249 ~~~~~~~~~~  258 (293)
T PRK05866        249 EWMVTAARTR  258 (293)
T ss_pred             HHHHHHHhcC
Confidence            9999999864

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.70  E-value=2.7e-16  Score=138.99  Aligned_cols=222  Identities=14%  Similarity=0.142  Sum_probs=135.8

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCC----CCCccccCcccccCcchHHhhcc-------CC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (363)
                      ..++++||||+|+||+++++.|+++|++|++++|+....+....    .........+|+.+.+++..+++       .+
T Consensus         9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   88 (278)
T PRK08277          9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPC   88 (278)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            34689999999999999999999999999999998654332211    11112244678988887766553       68


Q ss_pred             CEEEEccCCCCCC------------------CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCC
Q 017977          118 TAVVNLAGTPIGT------------------RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMR  177 (363)
Q Consensus       118 d~Vi~~a~~~~~~------------------~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~  177 (363)
                      |+|||+|+.....                  ....+..+..+++|+.++..+++++.+.  ..+..++|++||..+ +. 
T Consensus        89 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~-~~-  166 (278)
T PRK08277         89 DILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNA-FT-  166 (278)
T ss_pred             CEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchh-cC-
Confidence            9999999953221                  1234567788999999988666555432  144567999998843 22 


Q ss_pred             cccccccCCCcchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCccc-----chHHHHH-HHhC
Q 017977          178 AAHQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALA-----KMIPLFM-MFAG  251 (363)
Q Consensus       178 ~~~~e~~~~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~-----~~~~~~~-~~~~  251 (363)
                           ..+....|..+|.+...+.++       ....+. ..++++..++|+.+.++......     ....... ....
T Consensus       167 -----~~~~~~~Y~~sK~a~~~l~~~-------la~e~~-~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  233 (278)
T PRK08277        167 -----PLTKVPAYSAAKAAISNFTQW-------LAVHFA-KVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILAH  233 (278)
T ss_pred             -----CCCCCchhHHHHHHHHHHHHH-------HHHHhC-ccCeEEEEEEeccCcCcchhhhhccccccchhHHHHHhcc
Confidence                 112233455554322222211       111111 13899999999999887421100     0000111 1111


Q ss_pred             CCCCCCCCccccccHHHHHHHHHHHhcC-CC--CCc-eEEeeCC
Q 017977          252 GPLGSGQQWFSWIHLDDIVNLIYEALSN-PS--YRG-VINGTAP  291 (363)
Q Consensus       252 ~~~~~~~~~~~~i~v~D~a~a~~~~~~~-~~--~~g-~~~i~~~  291 (363)
                      .+      ...+...+|+|++++.++.. ..  ..| .+.+.+|
T Consensus       234 ~p------~~r~~~~~dva~~~~~l~s~~~~~~~tG~~i~vdgG  271 (278)
T PRK08277        234 TP------MGRFGKPEELLGTLLWLADEKASSFVTGVVLPVDGG  271 (278)
T ss_pred             CC------ccCCCCHHHHHHHHHHHcCccccCCcCCCEEEECCC
Confidence            11      12367899999999998876 33  445 6666554

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.70  E-value=9.5e-16  Score=133.12  Aligned_cols=219  Identities=16%  Similarity=0.064  Sum_probs=129.6

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeC-CCCccccc----CCCCCccccCcccccCcchHHhhcc-------CC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTR-SRSKAELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (363)
                      +++|+||||+|+||+.+++.|+++|++|+++.+ +.......    ...........+|+.+.+++.++++       .+
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRL   81 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence            468999999999999999999999999987754 33322211    1111112245678888887765543       58


Q ss_pred             CEEEEccCCCCC----CCCChhhHHHHHHHHHHHHHHHHHHHHhC--CCC---CCCeEEEeccceecCCcccccccCC-C
Q 017977          118 TAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEG---VRPSVLELVKPKYLMRAAHQEMITW-L  187 (363)
Q Consensus       118 d~Vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~---~~~~v~~SS~~~~yg~~~~~e~~~~-~  187 (363)
                      |+|||+||....    .....+..+..+++|+.++..+++++.+.  ..+   ..++|++||.++.++       .+. .
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~-------~~~~~  154 (248)
T PRK06947         82 DALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLG-------SPNEY  154 (248)
T ss_pred             CEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCC-------CCCCC
Confidence            999999996422    12234455778999999998887654432  011   235999998855554       111 1


Q ss_pred             cchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHH-hCCCCCCCCCccccccH
Q 017977          188 SDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMF-AGGPLGSGQQWFSWIHL  266 (363)
Q Consensus       188 ~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v  266 (363)
                      ..|..+|.....|.+       .....+. ..+++++++||+.+..+....... ....... ...+.      -.+..+
T Consensus       155 ~~Y~~sK~~~~~~~~-------~la~~~~-~~~i~v~~i~Pg~v~t~~~~~~~~-~~~~~~~~~~~~~------~~~~~~  219 (248)
T PRK06947        155 VDYAGSKGAVDTLTL-------GLAKELG-PHGVRVNAVRPGLIETEIHASGGQ-PGRAARLGAQTPL------GRAGEA  219 (248)
T ss_pred             cccHhhHHHHHHHHH-------HHHHHhh-hhCcEEEEEeccCcccccccccCC-HHHHHHHhhcCCC------CCCcCH
Confidence            235554332222211       0111111 238999999999998874221100 1111111 11111      114678


Q ss_pred             HHHHHHHHHHhcCCC--CCc-eEEeeC
Q 017977          267 DDIVNLIYEALSNPS--YRG-VINGTA  290 (363)
Q Consensus       267 ~D~a~a~~~~~~~~~--~~g-~~~i~~  290 (363)
                      +|++++++.++.++.  ..| .+.+.+
T Consensus       220 e~va~~~~~l~~~~~~~~~G~~~~~~g  246 (248)
T PRK06947        220 DEVAETIVWLLSDAASYVTGALLDVGG  246 (248)
T ss_pred             HHHHHHHHHHcCccccCcCCceEeeCC
Confidence            999999999987654  345 444443

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.70  E-value=1.5e-15  Score=132.51  Aligned_cols=221  Identities=15%  Similarity=0.056  Sum_probs=134.0

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcc-cccCCCCCccccCcccccCcchHHhhcc-------CCCEEE
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-ELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV  121 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~Vi  121 (363)
                      .|+++||||+|+||+++++.|+++|++|+++.|+..+. ..+... . .....+|+.|.+++.++++       ++|+||
T Consensus         7 ~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~-~-~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li   84 (255)
T PRK06463          7 GKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREK-G-VFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLV   84 (255)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhC-C-CeEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            47899999999999999999999999999887765432 222111 1 2245689999888877654       579999


Q ss_pred             EccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhhhhh
Q 017977          122 NLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYC  196 (363)
Q Consensus       122 ~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~  196 (363)
                      |+||.....   ....+..+..+++|+.++..+.+++.+.  ..+..++|++||.. .++.     ..+....|..+|.+
T Consensus        85 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~-~~~~-----~~~~~~~Y~asKaa  158 (255)
T PRK06463         85 NNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNA-GIGT-----AAEGTTFYAITKAG  158 (255)
T ss_pred             ECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHH-hCCC-----CCCCccHhHHHHHH
Confidence            999874322   2345566788999999965554443321  14556799999983 2220     01122345555433


Q ss_pred             cccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCc--ccc-hHHHHHHH-hCCCCCCCCCccccccHHHHHHH
Q 017977          197 LVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA--LAK-MIPLFMMF-AGGPLGSGQQWFSWIHLDDIVNL  272 (363)
Q Consensus       197 ~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~--~~~-~~~~~~~~-~~~~~~~~~~~~~~i~v~D~a~a  272 (363)
                      ...+.++      ... .+ ...+++++.++|+.+-.+....  ... ........ ...+      ...+..++|+|++
T Consensus       159 ~~~~~~~------la~-e~-~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~va~~  224 (255)
T PRK06463        159 IIILTRR------LAF-EL-GKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTV------LKTTGKPEDIANI  224 (255)
T ss_pred             HHHHHHH------HHH-Hh-hhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCCC------cCCCcCHHHHHHH
Confidence            3222211      011 11 1238999999999886552210  000 00111111 1111      1235789999999


Q ss_pred             HHHHhcCCC--CCc-eEEeeCCC
Q 017977          273 IYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       273 ~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      ++.++....  ..| .+.+.++.
T Consensus       225 ~~~l~s~~~~~~~G~~~~~dgg~  247 (255)
T PRK06463        225 VLFLASDDARYITGQVIVADGGR  247 (255)
T ss_pred             HHHHcChhhcCCCCCEEEECCCe
Confidence            999987543  345 66666653

>PRK08589 short chain dehydrogenase; Validated

Probab=99.70  E-value=6.7e-16  Score=135.89  Aligned_cols=226  Identities=15%  Similarity=0.051  Sum_probs=134.4

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCccccc----CCCCCccccCcccccCcchHHhhcc-------CC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (363)
                      .++++|||||+|+||+++++.|+++|++|++++|+ .+....    ...........+|+.+.+++..+++       .+
T Consensus         5 ~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   83 (272)
T PRK08589          5 ENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRV   83 (272)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence            34689999999999999999999999999999998 433221    1111112245689998887766554       57


Q ss_pred             CEEEEccCCCCC-C---CCChhhHHHHHHHHHHHHHHHHHHHHhC-CCCCCCeEEEeccceecCCcccccccCCCcchhh
Q 017977          118 TAVVNLAGTPIG-T---RWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCA  192 (363)
Q Consensus       118 d~Vi~~a~~~~~-~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~  192 (363)
                      |++||+||.... .   ....+..+..+++|+.++..+++++.+. .....++|++||..+..+       .+....|..
T Consensus        84 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------~~~~~~Y~a  156 (272)
T PRK08589         84 DVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQGGSIINTSSFSGQAA-------DLYRSGYNA  156 (272)
T ss_pred             CEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEeCchhhcCC-------CCCCchHHH
Confidence            999999997422 1   2234556778899999988777776643 112257999999843222       122334555


Q ss_pred             hhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccch-HHHH-HHHhCCCCCCCCCccccccHHHHH
Q 017977          193 KVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKM-IPLF-MMFAGGPLGSGQQWFSWIHLDDIV  270 (363)
Q Consensus       193 ~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~i~v~D~a  270 (363)
                      +|.+...+.++      +.. .+. ..|++++.+.||.+..+........ .... ...... .........+..++|+|
T Consensus       157 sKaal~~l~~~------la~-e~~-~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~va  227 (272)
T PRK08589        157 AKGAVINFTKS------IAI-EYG-RDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFREN-QKWMTPLGRLGKPEEVA  227 (272)
T ss_pred             HHHHHHHHHHH------HHH-Hhh-hcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhh-hhccCCCCCCcCHHHHH
Confidence            44332222110      111 111 2389999999999976632111000 0000 000000 00000111257899999


Q ss_pred             HHHHHHhcCCC--CCc-eEEeeCC
Q 017977          271 NLIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       271 ~a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      +++..++....  ..| .+.+.++
T Consensus       228 ~~~~~l~s~~~~~~~G~~i~vdgg  251 (272)
T PRK08589        228 KLVVFLASDDSSFITGETIRIDGG  251 (272)
T ss_pred             HHHHHHcCchhcCcCCCEEEECCC
Confidence            99999887543  345 5566554

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.70  E-value=1.1e-15  Score=132.95  Aligned_cols=218  Identities=13%  Similarity=0.062  Sum_probs=136.1

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccC----CCCCccccCcccccCcchHHhhcc-------CCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GST  118 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~~d  118 (363)
                      .++++||||+|+||+.+++.|+++|++|++++|+..+.....    ..........+|+.+.+++.++++       .+|
T Consensus         5 ~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   84 (253)
T PRK08217          5 DKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQLN   84 (253)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            468999999999999999999999999999999875432221    111111234678888777765543       479


Q ss_pred             EEEEccCCCCC------------CCCChhhHHHHHHHHHHHHHHHHHHHHhC---CCCCCCeEEEeccceecCCcccccc
Q 017977          119 AVVNLAGTPIG------------TRWSSEIKKEIKESRIRVTSKVVDLINES---PEGVRPSVLELVKPKYLMRAAHQEM  183 (363)
Q Consensus       119 ~Vi~~a~~~~~------------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~~v~~SS~~~~yg~~~~~e~  183 (363)
                      +|||++|....            .....+.....+++|+.++..+.+++.+.   ......+|++||. +.|+       
T Consensus        85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~-~~~~-------  156 (253)
T PRK08217         85 GLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSI-ARAG-------  156 (253)
T ss_pred             EEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccc-cccC-------
Confidence            99999986332            12234556678889999988776654432   0123458888887 5554       


Q ss_pred             cCCCcchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHH-H-HHhCCCCCCCCCcc
Q 017977          184 ITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF-M-MFAGGPLGSGQQWF  261 (363)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~  261 (363)
                      .+....|..+|.+...+.+      .+..+.  ...+++++.++|+.+.++....   ..+.. . .....+      ..
T Consensus       157 ~~~~~~Y~~sK~a~~~l~~------~la~~~--~~~~i~v~~v~pg~v~t~~~~~---~~~~~~~~~~~~~~------~~  219 (253)
T PRK08217        157 NMGQTNYSASKAGVAAMTV------TWAKEL--ARYGIRVAAIAPGVIETEMTAA---MKPEALERLEKMIP------VG  219 (253)
T ss_pred             CCCCchhHHHHHHHHHHHH------HHHHHH--HHcCcEEEEEeeCCCcCccccc---cCHHHHHHHHhcCC------cC
Confidence            2233445554322222111      111111  1248999999999998774322   11211 1 111112      22


Q ss_pred             ccccHHHHHHHHHHHhcCCCCCc-eEEeeCCC
Q 017977          262 SWIHLDDIVNLIYEALSNPSYRG-VINGTAPN  292 (363)
Q Consensus       262 ~~i~v~D~a~a~~~~~~~~~~~g-~~~i~~~~  292 (363)
                      .+.+++|+|+++..++......| ++++.++-
T Consensus       220 ~~~~~~~~a~~~~~l~~~~~~~g~~~~~~gg~  251 (253)
T PRK08217        220 RLGEPEEIAHTVRFIIENDYVTGRVLEIDGGL  251 (253)
T ss_pred             CCcCHHHHHHHHHHHHcCCCcCCcEEEeCCCc
Confidence            46789999999999997644445 88888753

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.69  E-value=4.7e-16  Score=135.06  Aligned_cols=196  Identities=13%  Similarity=0.104  Sum_probs=129.3

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCC----C--CCccccCcccccCcchHHhhcc-------C
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----G--KKTRFFPGVMIAEEPQWRDCIQ-------G  116 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~--~~~~~~~~~d~~~~~~~~~~~~-------~  116 (363)
                      +++++||||+|+||++++++|+++|++|++++|++.+......    .  ........+|+.+.+++.++++       +
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG   81 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            3689999999999999999999999999999998755332211    0  1112244679998887766554       6


Q ss_pred             CCEEEEccCCCCCCC---CChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccC-CCcch
Q 017977          117 STAVVNLAGTPIGTR---WSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMIT-WLSDY  190 (363)
Q Consensus       117 ~d~Vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~-~~~~~  190 (363)
                      +|+|||+||......   ...+.....+++|+.++.++++++...  ..+.+++|++||..+.++       .+ +...|
T Consensus        82 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-------~~~~~~~Y  154 (248)
T PRK08251         82 LDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRG-------LPGVKAAY  154 (248)
T ss_pred             CCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccC-------CCCCcccH
Confidence            899999999743321   234456678999999998888887532  145678999999755444       11 12345


Q ss_pred             hhhhhhcccchhhHHHHHHHHHHHh-c-cCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHH
Q 017977          191 CAKVYCLVSFNRGVLVCREWEGTAL-K-VNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDD  268 (363)
Q Consensus       191 ~~~~~~~~~y~~~k~~~~~~~~~~~-~-~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  268 (363)
                      ..+          |........... . ...++++++++|+.+.++.....           +      . ...++..+|
T Consensus       155 ~~s----------K~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~-----------~------~-~~~~~~~~~  206 (248)
T PRK08251        155 AAS----------KAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKA-----------K------S-TPFMVDTET  206 (248)
T ss_pred             HHH----------HHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhcc-----------c------c-CCccCCHHH
Confidence            444          322222211111 1 12389999999999876532110           0      0 113578999


Q ss_pred             HHHHHHHHhcCC
Q 017977          269 IVNLIYEALSNP  280 (363)
Q Consensus       269 ~a~a~~~~~~~~  280 (363)
                      .|++++.++++.
T Consensus       207 ~a~~i~~~~~~~  218 (248)
T PRK08251        207 GVKALVKAIEKE  218 (248)
T ss_pred             HHHHHHHHHhcC
Confidence            999999999764

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.69  E-value=1.4e-15  Score=133.33  Aligned_cols=222  Identities=14%  Similarity=0.055  Sum_probs=140.5

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccC----CCCCccccCcccccCcchHHhhcc-------CC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (363)
                      .+++++||||+|+||++++++|+++|++|++++|+.++.....    ..........+|+.+.+++..+++       .+
T Consensus         9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   88 (265)
T PRK07097          9 KGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVI   88 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            3468999999999999999999999999999999876543221    111112244689999888877664       47


Q ss_pred             CEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhh
Q 017977          118 TAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCA  192 (363)
Q Consensus       118 d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~  192 (363)
                      |+|||+||.....   ....+.....+++|+.++..+.+++...  ..+..++|++||..+.++       .+....|..
T Consensus        89 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-------~~~~~~Y~~  161 (265)
T PRK07097         89 DILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELG-------RETVSAYAA  161 (265)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCC-------CCCCccHHH
Confidence            9999999974321   2345667888999999988777776542  135567999998755444       223345665


Q ss_pred             hhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccc------hHHHHHH-HhCCCCCCCCCcccccc
Q 017977          193 KVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAK------MIPLFMM-FAGGPLGSGQQWFSWIH  265 (363)
Q Consensus       193 ~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~------~~~~~~~-~~~~~~~~~~~~~~~i~  265 (363)
                      +|.+...+.++       ....+. ..|+.++.++||.+.++.......      ..+.... ....+      ...+..
T Consensus       162 sKaal~~l~~~-------la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~  227 (265)
T PRK07097        162 AKGGLKMLTKN-------IASEYG-EANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTP------AARWGD  227 (265)
T ss_pred             HHHHHHHHHHH-------HHHHhh-hcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCC------ccCCcC
Confidence            54333222211       111111 238999999999998874321100      0001111 11111      123677


Q ss_pred             HHHHHHHHHHHhcCCC--CCc-eEEeeCC
Q 017977          266 LDDIVNLIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       266 v~D~a~a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      .+|+|+++..++....  ..| .+.+.++
T Consensus       228 ~~dva~~~~~l~~~~~~~~~g~~~~~~gg  256 (265)
T PRK07097        228 PEDLAGPAVFLASDASNFVNGHILYVDGG  256 (265)
T ss_pred             HHHHHHHHHHHhCcccCCCCCCEEEECCC
Confidence            8999999999997633  345 5555554

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.69  E-value=9.9e-16  Score=134.43  Aligned_cols=220  Identities=16%  Similarity=0.120  Sum_probs=136.5

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc-------CCCEEE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV  121 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~Vi  121 (363)
                      ..++++||||+|+||+++++.|+++|++|++++|+.......     ......+|+.|.+++.++++       .+|+||
T Consensus         8 ~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li   82 (266)
T PRK06171          8 QGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQHE-----NYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLV   82 (266)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccccC-----ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            346899999999999999999999999999999987654321     11245689999888876654       579999


Q ss_pred             EccCCCCCC------------CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCC
Q 017977          122 NLAGTPIGT------------RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWL  187 (363)
Q Consensus       122 ~~a~~~~~~------------~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~  187 (363)
                      |+||.....            ....+..+..+++|+.++..+++++.+.  ..+..++|++||..+..+       .+..
T Consensus        83 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-------~~~~  155 (266)
T PRK06171         83 NNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEG-------SEGQ  155 (266)
T ss_pred             ECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCC-------CCCC
Confidence            999963221            2345566788999999999999888753  123456999998844322       2223


Q ss_pred             cchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCc--ccc--------hHHHH-HHHhCCCCCC
Q 017977          188 SDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA--LAK--------MIPLF-MMFAGGPLGS  256 (363)
Q Consensus       188 ~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~--~~~--------~~~~~-~~~~~~~~~~  256 (363)
                      ..|..+|.+...+.++      +.. .+. ..|+++.+++||.+.......  ...        ..... ......   .
T Consensus       156 ~~Y~~sK~a~~~l~~~------la~-e~~-~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~  224 (266)
T PRK06171        156 SCYAATKAALNSFTRS------WAK-ELG-KHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKT---S  224 (266)
T ss_pred             chhHHHHHHHHHHHHH------HHH-Hhh-hcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhccc---c
Confidence            4555554332222211      111 111 238999999999885221100  000        00011 111100   0


Q ss_pred             CCCccccccHHHHHHHHHHHhcCCC--CCc-eEEeeCC
Q 017977          257 GQQWFSWIHLDDIVNLIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       257 ~~~~~~~i~v~D~a~a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      ......+...+|+|+++..++....  ..| ++++.++
T Consensus       225 ~~p~~r~~~~~eva~~~~fl~s~~~~~itG~~i~vdgg  262 (266)
T PRK06171        225 TIPLGRSGKLSEVADLVCYLLSDRASYITGVTTNIAGG  262 (266)
T ss_pred             cccCCCCCCHHHhhhheeeeeccccccceeeEEEecCc
Confidence            0111236788999999999987543  344 6666554

>PRK08017 oxidoreductase; Provisional

Probab=99.69  E-value=6.9e-16  Score=134.63  Aligned_cols=205  Identities=13%  Similarity=0.077  Sum_probs=129.3

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhc--------cCCCEEEE
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI--------QGSTAVVN  122 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~--------~~~d~Vi~  122 (363)
                      ++|+||||+|+||+++++.|+++|++|++++|+..+.+......  .....+|+.|.+++.+++        ..+|.+||
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~--~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~   80 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNSLG--FTGILLDLDDPESVERAADEVIALTDNRLYGLFN   80 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHhCC--CeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEE
Confidence            47999999999999999999999999999999876544332211  123457888877665544        24689999


Q ss_pred             ccCCCCCC---CCChhhHHHHHHHHHHHHHHH----HHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhhhhh
Q 017977          123 LAGTPIGT---RWSSEIKKEIKESRIRVTSKV----VDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVY  195 (363)
Q Consensus       123 ~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l----~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~  195 (363)
                      ++|.....   ..+.+..+..++.|+.++.++    ++++.+  .+.+++|++||..+..+       .+....|..+  
T Consensus        81 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~--~~~~~iv~~ss~~~~~~-------~~~~~~Y~~s--  149 (256)
T PRK08017         81 NAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLP--HGEGRIVMTSSVMGLIS-------TPGRGAYAAS--  149 (256)
T ss_pred             CCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhh--cCCCEEEEEcCcccccC-------CCCccHHHHH--
Confidence            99864321   224455678899999988775    555555  56678999998743222       1222344444  


Q ss_pred             hcccchhhHHHHHHHHHHH--hccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCC-CCCCCccccccHHHHHHH
Q 017977          196 CLVSFNRGVLVCREWEGTA--LKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPL-GSGQQWFSWIHLDDIVNL  272 (363)
Q Consensus       196 ~~~~y~~~k~~~~~~~~~~--~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~D~a~a  272 (363)
                              |.....+....  +....++++++++|+.+..+-.......      ....+. ..+...+.+++++|++++
T Consensus       150 --------K~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~d~a~~  215 (256)
T PRK08017        150 --------KYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQT------QSDKPVENPGIAARFTLGPEAVVPK  215 (256)
T ss_pred             --------HHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchhhcccch------hhccchhhhHHHhhcCCCHHHHHHH
Confidence                    43333332211  1122489999999988765421110000      000111 112223457999999999


Q ss_pred             HHHHhcCCCC
Q 017977          273 IYEALSNPSY  282 (363)
Q Consensus       273 ~~~~~~~~~~  282 (363)
                      +..+++++..
T Consensus       216 ~~~~~~~~~~  225 (256)
T PRK08017        216 LRHALESPKP  225 (256)
T ss_pred             HHHHHhCCCC
Confidence            9999987653

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.69  E-value=4e-15  Score=128.22  Aligned_cols=217  Identities=15%  Similarity=0.062  Sum_probs=133.5

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc-------CCCEEEE
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVVN  122 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~Vi~  122 (363)
                      +++++||||+|+||+++++.|+++|++|++++|++.+......... .....+|+.|.+++.++++       ++|++||
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~   80 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAG-AQCIQADFSTNAGIMAFIDELKQHTDGLRAIIH   80 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcC-CEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEE
Confidence            3589999999999999999999999999999998754322111111 1244679998887766543       4899999


Q ss_pred             ccCCCCC---CCCChhhHHHHHHHHHHHHHHHHHHHHhC--CCC--CCCeEEEeccceecCCcccccccCCCcchhhhhh
Q 017977          123 LAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEG--VRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVY  195 (363)
Q Consensus       123 ~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~--~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~  195 (363)
                      +||....   .....+..+..+++|+.++..+.+++.+.  ..+  ..++|++||..+..+       .+....|..+|.
T Consensus        81 ~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~-------~~~~~~Y~asKa  153 (236)
T PRK06483         81 NASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKG-------SDKHIAYAASKA  153 (236)
T ss_pred             CCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccC-------CCCCccHHHHHH
Confidence            9986322   12245667888999999988777666653  122  356899988732111       222335555543


Q ss_pred             hcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHHHH
Q 017977          196 CLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE  275 (363)
Q Consensus       196 ~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~  275 (363)
                      +...+.+         ........++++..++|+.+..+.... .....  ......+++      -+...+|+++++..
T Consensus       154 al~~l~~---------~~a~e~~~~irvn~v~Pg~~~~~~~~~-~~~~~--~~~~~~~~~------~~~~~~~va~~~~~  215 (236)
T PRK06483        154 ALDNMTL---------SFAAKLAPEVKVNSIAPALILFNEGDD-AAYRQ--KALAKSLLK------IEPGEEEIIDLVDY  215 (236)
T ss_pred             HHHHHHH---------HHHHHHCCCcEEEEEccCceecCCCCC-HHHHH--HHhccCccc------cCCCHHHHHHHHHH
Confidence            3222221         111111126999999999885432111 11111  111122221      14568999999999


Q ss_pred             HhcCCCCCc-eEEeeCCC
Q 017977          276 ALSNPSYRG-VINGTAPN  292 (363)
Q Consensus       276 ~~~~~~~~g-~~~i~~~~  292 (363)
                      ++...-..| ++.+.++.
T Consensus       216 l~~~~~~~G~~i~vdgg~  233 (236)
T PRK06483        216 LLTSCYVTGRSLPVDGGR  233 (236)
T ss_pred             HhcCCCcCCcEEEeCccc
Confidence            997544555 66666553

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.69  E-value=1.4e-15  Score=132.45  Aligned_cols=221  Identities=15%  Similarity=0.132  Sum_probs=137.8

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCC----CCCccccCcccccCcchHHhhcc-------CC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (363)
                      ..++++||||+|+||+++++.|+++|++|++++|+....+....    .........+|+.|.+++.++++       .+
T Consensus         8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   87 (253)
T PRK05867          8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGI   87 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            34689999999999999999999999999999998765433211    11112244689999888776654       68


Q ss_pred             CEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCC-CCCeEEEeccceecCCcccccccC-CCcch
Q 017977          118 TAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLELVKPKYLMRAAHQEMIT-WLSDY  190 (363)
Q Consensus       118 d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~-~~~~v~~SS~~~~yg~~~~~e~~~-~~~~~  190 (363)
                      |++||+||.....   ....+..+..+++|+.++..+++++.+.  ..+ ..++|++||..+...      ..+ ....|
T Consensus        88 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~------~~~~~~~~Y  161 (253)
T PRK05867         88 DIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHII------NVPQQVSHY  161 (253)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCC------CCCCCccch
Confidence            9999999974322   2234556778899999999998887642  122 245888887732111      001 12345


Q ss_pred             hhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHH
Q 017977          191 CAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIV  270 (363)
Q Consensus       191 ~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  270 (363)
                      ..+|.+...+.++      +..+ +. ..|+++..++||.+-.+..........  ......+.      ..+..++|+|
T Consensus       162 ~asKaal~~~~~~------la~e-~~-~~gI~vn~i~PG~v~t~~~~~~~~~~~--~~~~~~~~------~r~~~p~~va  225 (253)
T PRK05867        162 CASKAAVIHLTKA------MAVE-LA-PHKIRVNSVSPGYILTELVEPYTEYQP--LWEPKIPL------GRLGRPEELA  225 (253)
T ss_pred             HHHHHHHHHHHHH------HHHH-Hh-HhCeEEEEeecCCCCCcccccchHHHH--HHHhcCCC------CCCcCHHHHH
Confidence            5554333322221      0111 11 238999999999997664321111111  11112222      1367899999


Q ss_pred             HHHHHHhcCCC--CCc-eEEeeCC
Q 017977          271 NLIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       271 ~a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      +++..++....  ..| .+.+.+|
T Consensus       226 ~~~~~L~s~~~~~~tG~~i~vdgG  249 (253)
T PRK05867        226 GLYLYLASEASSYMTGSDIVIDGG  249 (253)
T ss_pred             HHHHHHcCcccCCcCCCeEEECCC
Confidence            99999987543  344 6666655

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.69  E-value=3e-16  Score=141.53  Aligned_cols=183  Identities=13%  Similarity=-0.017  Sum_probs=119.0

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCC----CCCccccCcccccCcchHHhhcc-------CC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (363)
                      ++++|+||||+|+||.++++.|+++|++|++++|+..+......    ......+..+|+.|.+++.++++       .+
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   84 (322)
T PRK07453          5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPL   84 (322)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence            45789999999999999999999999999999998765432211    11112244679999888877664       48


Q ss_pred             CEEEEccCCCCC----CCCChhhHHHHHHHHHHHHHHHHHHHHhC--CCC--CCCeEEEeccceecC----Cccccc--c
Q 017977          118 TAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEG--VRPSVLELVKPKYLM----RAAHQE--M  183 (363)
Q Consensus       118 d~Vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~--~~~~v~~SS~~~~yg----~~~~~e--~  183 (363)
                      |+|||+||....    ...+.+..+..+++|+.++.++++++.+.  ..+  ..++|++||....++    ..+..+  +
T Consensus        85 D~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~~~~  164 (322)
T PRK07453         85 DALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPAPAD  164 (322)
T ss_pred             cEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCCCccc
Confidence            999999996422    12345667888999999999888887653  122  258999999844332    111110  0


Q ss_pred             --cC-------C-------CcchhhhhhhcccchhhHHHHHHHHHHHhcc---CCCceEEEEeeceEEeCC
Q 017977          184 --IT-------W-------LSDYCAKVYCLVSFNRGVLVCREWEGTALKV---NKDVRLALIRIGIVLGKD  235 (363)
Q Consensus       184 --~~-------~-------~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~---~~~~~~~ilRp~~v~g~~  235 (363)
                        ..       .       ...|    .....|..+|.....+.....+.   ..|+.+++++||.|++..
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~  231 (322)
T PRK07453        165 LGDLSGFEAGFKAPISMADGKKF----KPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTP  231 (322)
T ss_pred             hhhhhcchhcccccccccCccCC----CccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCc
Confidence              00       0       0011    12245777775443333322222   238999999999998643

>PRK07069 short chain dehydrogenase; Validated

Probab=99.69  E-value=5.8e-16  Score=134.71  Aligned_cols=218  Identities=15%  Similarity=0.127  Sum_probs=131.6

Q ss_pred             EEEEecCcchHHHHHHHHHHhCCCEEEEEeCC-CCcccccC----CC--CCccccCcccccCcchHHhhcc-------CC
Q 017977           52 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRS-RSKAELIF----PG--KKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (363)
Q Consensus        52 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~~~----~~--~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (363)
                      +|+||||+|+||+++++.|+++|++|++++|+ .+......    ..  ........+|+.|.+++.++++       ++
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   80 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGL   80 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence            48999999999999999999999999999998 43322211    11  0111123568988888766553       57


Q ss_pred             CEEEEccCCCCCC---CCChhhHHHHHHHHHH----HHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcch
Q 017977          118 TAVVNLAGTPIGT---RWSSEIKKEIKESRIR----VTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDY  190 (363)
Q Consensus       118 d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~----~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~  190 (363)
                      |+|||+|+.....   ....+.....+++|+.    .+..+++++.+  .+.+++|++||..+.++       .+..+.|
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~~~ii~~ss~~~~~~-------~~~~~~Y  151 (251)
T PRK07069         81 SVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRA--SQPASIVNISSVAAFKA-------EPDYTAY  151 (251)
T ss_pred             cEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhh--cCCcEEEEecChhhccC-------CCCCchh
Confidence            9999999875332   1233445677889988    66777777776  56678999999843222       1223355


Q ss_pred             hhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccc-hH--HHHH-HHhCCCCCCCCCccccccH
Q 017977          191 CAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAK-MI--PLFM-MFAGGPLGSGQQWFSWIHL  266 (363)
Q Consensus       191 ~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~-~~--~~~~-~~~~~~~~~~~~~~~~i~v  266 (363)
                      ..+|.....+.      ..+..+......+++++.++|+.+.++....... ..  ..+. ...+.+      ...+.++
T Consensus       152 ~~sK~a~~~~~------~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~  219 (251)
T PRK07069        152 NASKAAVASLT------KSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVP------LGRLGEP  219 (251)
T ss_pred             HHHHHHHHHHH------HHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccCC------CCCCcCH
Confidence            55543221111      1111121222236899999999998875321100 00  0111 111111      1235689


Q ss_pred             HHHHHHHHHHhcCCC--CCc-eEEeeC
Q 017977          267 DDIVNLIYEALSNPS--YRG-VINGTA  290 (363)
Q Consensus       267 ~D~a~a~~~~~~~~~--~~g-~~~i~~  290 (363)
                      +|++++++.++..+.  ..| .+.+.+
T Consensus       220 ~~va~~~~~l~~~~~~~~~g~~i~~~~  246 (251)
T PRK07069        220 DDVAHAVLYLASDESRFVTGAELVIDG  246 (251)
T ss_pred             HHHHHHHHHHcCccccCccCCEEEECC
Confidence            999999999876543  334 444443

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.69  E-value=1.5e-15  Score=133.12  Aligned_cols=222  Identities=15%  Similarity=0.078  Sum_probs=136.3

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccC----CCCCccccCcccccCcchHHhhcc-------CC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (363)
                      ..++|+||||+|+||+++++.|+++|++|++++|+.+......    ..........+|+.+.+++.++++       ++
T Consensus         8 ~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~i   87 (264)
T PRK07576          8 AGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGPI   87 (264)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            4468999999999999999999999999999999875533221    111111244679998887876654       47


Q ss_pred             CEEEEccCCCCC---CCCChhhHHHHHHHHHHHHHHHHHHHHhC-CCCCCCeEEEeccceecCCcccccccCCCcchhhh
Q 017977          118 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAK  193 (363)
Q Consensus       118 d~Vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~  193 (363)
                      |+|||+|+....   .....+.....+++|+.++.++++++.+. .....++|++||..+..+       .+....|..+
T Consensus        88 D~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~~-------~~~~~~Y~as  160 (264)
T PRK07576         88 DVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVP-------MPMQAHVCAA  160 (264)
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhccC-------CCCccHHHHH
Confidence            999999985322   12344556778899999999999888753 112357999998743221       2233455555


Q ss_pred             hhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCC-Ccc-cchHHHHHHHhCCCCCCCCCccccccHHHHHH
Q 017977          194 VYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDG-GAL-AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVN  271 (363)
Q Consensus       194 ~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  271 (363)
                      |.....|.++      . ...+. ..+++++.++|+.+.+... ... ..-..........+      ...+...+|+|+
T Consensus       161 K~a~~~l~~~------l-a~e~~-~~gi~v~~v~pg~~~~t~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~dva~  226 (264)
T PRK07576        161 KAGVDMLTRT------L-ALEWG-PEGIRVNSIVPGPIAGTEGMARLAPSPELQAAVAQSVP------LKRNGTKQDIAN  226 (264)
T ss_pred             HHHHHHHHHH------H-HHHhh-hcCeEEEEEecccccCcHHHhhcccCHHHHHHHHhcCC------CCCCCCHHHHHH
Confidence            4332222211      0 11111 1389999999999875321 110 00000001111111      223678999999


Q ss_pred             HHHHHhcCCC--CCc-eEEeeCC
Q 017977          272 LIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       272 a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      +++.++..+.  ..| .+.+.++
T Consensus       227 ~~~~l~~~~~~~~~G~~~~~~gg  249 (264)
T PRK07576        227 AALFLASDMASYITGVVLPVDGG  249 (264)
T ss_pred             HHHHHcChhhcCccCCEEEECCC
Confidence            9999997543  345 4455554

>PRK08264 short chain dehydrogenase; Validated

Probab=99.69  E-value=2.1e-15  Score=130.06  Aligned_cols=191  Identities=17%  Similarity=0.076  Sum_probs=128.4

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCC-EEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc---CCCEEEEccC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ---GSTAVVNLAG  125 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~~d~Vi~~a~  125 (363)
                      .++|+||||+|+||+++++.|+++|+ +|++++|+..+...   .........+|+.|.+++.++++   .+|+|||+++
T Consensus         6 ~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag   82 (238)
T PRK08264          6 GKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDVTDPASVAAAAEAASDVTILVNNAG   82 (238)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecCCCHHHHHHHHHhcCCCCEEEECCC
Confidence            46899999999999999999999998 99999998765443   11112244689999888887776   4799999999


Q ss_pred             CCCC----CCCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhccc
Q 017977          126 TPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVS  199 (363)
Q Consensus       126 ~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~~  199 (363)
                      ....    .....+.....+++|+.++.++++++.+.  ..+..++|++||..+..+       .+....|...      
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~-------~~~~~~y~~s------  149 (238)
T PRK08264         83 IFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVN-------FPNLGTYSAS------  149 (238)
T ss_pred             cCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccC-------CCCchHhHHH------
Confidence            7222    12345666788999999999999987632  145667999998733221       1222334444      


Q ss_pred             chhhHHHHHHHHHHHhc--cCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHHHHHh
Q 017977          200 FNRGVLVCREWEGTALK--VNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEAL  277 (363)
Q Consensus       200 y~~~k~~~~~~~~~~~~--~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~  277 (363)
                          |............  ...+++++++||+.+.++.....                    ....+..+|+++.++..+
T Consensus       150 ----K~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~~~--------------------~~~~~~~~~~a~~~~~~~  205 (238)
T PRK08264        150 ----KAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAAGL--------------------DAPKASPADVARQILDAL  205 (238)
T ss_pred             ----HHHHHHHHHHHHHHhhhcCeEEEEEeCCcccccccccC--------------------CcCCCCHHHHHHHHHHHH
Confidence                3222222221111  12389999999999876531110                    001577889999998888


Q ss_pred             cCC
Q 017977          278 SNP  280 (363)
Q Consensus       278 ~~~  280 (363)
                      ...
T Consensus       206 ~~~  208 (238)
T PRK08264        206 EAG  208 (238)
T ss_pred             hCC
Confidence            753

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.68  E-value=1.1e-15  Score=131.22  Aligned_cols=215  Identities=15%  Similarity=0.018  Sum_probs=137.0

Q ss_pred             EEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCC---CCCccccCcccccCcchHHhhcc---CCCEEEEccCCC
Q 017977           54 SVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP---GKKTRFFPGVMIAEEPQWRDCIQ---GSTAVVNLAGTP  127 (363)
Q Consensus        54 lVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~---~~d~Vi~~a~~~  127 (363)
                      +||||+|+||+++++.|+++|++|++++|+.........   .........+|+.|.+++.++++   .+|++||+++..
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag~~   80 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVITAADT   80 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEECCCCC
Confidence            699999999999999999999999999998654332211   01112245689999999988776   479999999874


Q ss_pred             CCC---CCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhcccchhhH
Q 017977          128 IGT---RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRGV  204 (363)
Q Consensus       128 ~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~~y~~~k  204 (363)
                      ...   ....+..+.++++|+.++.++.++...  .+.+++|++||.++ +.      ..+..+.|..+|..        
T Consensus        81 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~g~iv~~ss~~~-~~------~~~~~~~Y~~sK~a--------  143 (230)
T PRK07041         81 PGGPVRALPLAAAQAAMDSKFWGAYRVARAARI--APGGSLTFVSGFAA-VR------PSASGVLQGAINAA--------  143 (230)
T ss_pred             CCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhh--cCCeEEEEECchhh-cC------CCCcchHHHHHHHH--------
Confidence            332   224456788899999999999996554  45678999998843 22      12233445555332        


Q ss_pred             HHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc--cchHHHHH-HHhCCCCCCCCCccccccHHHHHHHHHHHhcCCC
Q 017977          205 LVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL--AKMIPLFM-MFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS  281 (363)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~  281 (363)
                        .....+.......+++++.++|+.+-++.....  ......+. .....+.      ..+..++|+|++++.++....
T Consensus       144 --~~~~~~~la~e~~~irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~dva~~~~~l~~~~~  215 (230)
T PRK07041        144 --LEALARGLALELAPVRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLPA------RRVGQPEDVANAILFLAANGF  215 (230)
T ss_pred             --HHHHHHHHHHHhhCceEEEEeecccccHHHHhhhccchHHHHHHHHhcCCC------CCCcCHHHHHHHHHHHhcCCC
Confidence              222222111111258899999998865431110  00011111 1111111      124578999999999998654


Q ss_pred             CCc-eEEeeCCCC
Q 017977          282 YRG-VINGTAPNP  293 (363)
Q Consensus       282 ~~g-~~~i~~~~~  293 (363)
                      ..| .|++.++.+
T Consensus       216 ~~G~~~~v~gg~~  228 (230)
T PRK07041        216 TTGSTVLVDGGHA  228 (230)
T ss_pred             cCCcEEEeCCCee
Confidence            444 888887754

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.68  E-value=2.5e-15  Score=125.95  Aligned_cols=192  Identities=18%  Similarity=0.114  Sum_probs=128.9

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc---CCCEEEEccCCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ---GSTAVVNLAGTP  127 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~~d~Vi~~a~~~  127 (363)
                      |+++||||+|+||+++++.|.++ ++|++++|+..             ...+|+.|.++++++++   ++|+|||+||..
T Consensus         1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-------------~~~~D~~~~~~~~~~~~~~~~id~lv~~ag~~   66 (199)
T PRK07578          1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-------------DVQVDITDPASIRALFEKVGKVDAVVSAAGKV   66 (199)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-------------ceEecCCChHHHHHHHHhcCCCCEEEECCCCC
Confidence            58999999999999999999999 99999999753             23479999888877765   689999999964


Q ss_pred             CCC---CCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhcccchhhH
Q 017977          128 IGT---RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRGV  204 (363)
Q Consensus       128 ~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~~y~~~k  204 (363)
                      ...   ....+.....+++|+.++.++.+++.+.......++++||..+..+       .+....|..+|.+...|.+  
T Consensus        67 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~~-------~~~~~~Y~~sK~a~~~~~~--  137 (199)
T PRK07578         67 HFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDEP-------IPGGASAATVNGALEGFVK--  137 (199)
T ss_pred             CCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCCC-------CCCchHHHHHHHHHHHHHH--
Confidence            322   2344556778899999999999988763112346888887743211       2233456655443333321  


Q ss_pred             HHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHHHHHhcCCCCCc
Q 017977          205 LVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRG  284 (363)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~g  284 (363)
                             ....+...|+++..++|+.+-.+..        ..    +..+.    ...++..+|+|+++..+++....++
T Consensus       138 -------~la~e~~~gi~v~~i~Pg~v~t~~~--------~~----~~~~~----~~~~~~~~~~a~~~~~~~~~~~~g~  194 (199)
T PRK07578        138 -------AAALELPRGIRINVVSPTVLTESLE--------KY----GPFFP----GFEPVPAARVALAYVRSVEGAQTGE  194 (199)
T ss_pred             -------HHHHHccCCeEEEEEcCCcccCchh--------hh----hhcCC----CCCCCCHHHHHHHHHHHhccceeeE
Confidence                   1111113489999999998754311        00    00010    1236899999999999998654444


Q ss_pred             eEEe
Q 017977          285 VING  288 (363)
Q Consensus       285 ~~~i  288 (363)
                      ++++
T Consensus       195 ~~~~  198 (199)
T PRK07578        195 VYKV  198 (199)
T ss_pred             Eecc
Confidence            6654

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.68  E-value=9.8e-16  Score=136.43  Aligned_cols=213  Identities=13%  Similarity=0.113  Sum_probs=133.8

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCC---CCccccCcccccCcchHHhhcc-------CCC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG---KKTRFFPGVMIAEEPQWRDCIQ-------GST  118 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~-------~~d  118 (363)
                      .+++|+||||+|.||+++++.|+++|++|++++|+....+.....   ........+|+.|.+++.++++       .+|
T Consensus         8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id   87 (296)
T PRK05872          8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGID   87 (296)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            346899999999999999999999999999999987654332211   1111122379999887766553       589


Q ss_pred             EEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC-CCCCCCeEEEeccceecCCcccccccCCCcchhhhh
Q 017977          119 AVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKV  194 (363)
Q Consensus       119 ~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~  194 (363)
                      +|||+||.....   ..+.+..+..+++|+.++.++++++... .....++|++||.++..+       .+....|..+|
T Consensus        88 ~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~-------~~~~~~Y~asK  160 (296)
T PRK05872         88 VVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAA-------APGMAAYCASK  160 (296)
T ss_pred             EEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCC-------CCCchHHHHHH
Confidence            999999974332   2344556788999999999999988652 122357999998843222       22234555554


Q ss_pred             hhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHh-CCCCCCCCCccccccHHHHHHHH
Q 017977          195 YCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFA-GGPLGSGQQWFSWIHLDDIVNLI  273 (363)
Q Consensus       195 ~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~D~a~a~  273 (363)
                      .....|.++      ... .+. ..|+.++++.|+.+..+...........+.... ..+.    ....++..+|+|+++
T Consensus       161 aal~~~~~~------l~~-e~~-~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~----p~~~~~~~~~va~~i  228 (296)
T PRK05872        161 AGVEAFANA------LRL-EVA-HHGVTVGSAYLSWIDTDLVRDADADLPAFRELRARLPW----PLRRTTSVEKCAAAF  228 (296)
T ss_pred             HHHHHHHHH------HHH-HHH-HHCcEEEEEecCcccchhhhhccccchhHHHHHhhCCC----cccCCCCHHHHHHHH
Confidence            333322221      001 111 238999999999987663211100001111111 1110    112367899999999


Q ss_pred             HHHhcCC
Q 017977          274 YEALSNP  280 (363)
Q Consensus       274 ~~~~~~~  280 (363)
                      ..++.+.
T Consensus       229 ~~~~~~~  235 (296)
T PRK05872        229 VDGIERR  235 (296)
T ss_pred             HHHHhcC
Confidence            9999764

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.68  E-value=1.8e-15  Score=131.85  Aligned_cols=220  Identities=13%  Similarity=0.051  Sum_probs=136.0

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccC----CCCCccccCcccccCcchHHhhcc-------CCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GST  118 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~~d  118 (363)
                      .++|+||||+|+||++++++|+++|++|++++|+.++.....    ..........+|+.+.+++.++++       .+|
T Consensus         7 ~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id   86 (253)
T PRK06172          7 GKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRLD   86 (253)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence            469999999999999999999999999999999876533221    111112244689998888776654       469


Q ss_pred             EEEEccCCCCC----CCCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhh
Q 017977          119 AVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCA  192 (363)
Q Consensus       119 ~Vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~  192 (363)
                      +|||++|....    .....+..+..+++|+.++..+++++...  ..+..++|++||..+..+       .+....|..
T Consensus        87 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~-------~~~~~~Y~~  159 (253)
T PRK06172         87 YAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGA-------APKMSIYAA  159 (253)
T ss_pred             EEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccC-------CCCCchhHH
Confidence            99999996422    12244566788999999987776654421  144567999998843222       122334544


Q ss_pred             hhhhcccchhhHHHHHHHHHHH-hcc-CCCceEEEEeeceEEeCCCCcc-cchHHHHHHH-hCCCCCCCCCccccccHHH
Q 017977          193 KVYCLVSFNRGVLVCREWEGTA-LKV-NKDVRLALIRIGIVLGKDGGAL-AKMIPLFMMF-AGGPLGSGQQWFSWIHLDD  268 (363)
Q Consensus       193 ~~~~~~~y~~~k~~~~~~~~~~-~~~-~~~~~~~ilRp~~v~g~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~i~v~D  268 (363)
                      +|.+          ...+.... ... ..++++..++||.+-.+..... .......... ...++      ..+..++|
T Consensus       160 sKaa----------~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~------~~~~~p~~  223 (253)
T PRK06172        160 SKHA----------VIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHPV------GRIGKVEE  223 (253)
T ss_pred             HHHH----------HHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccChHHHHHHhccCCC------CCccCHHH
Confidence            4322          22221111 111 2389999999999876632211 0001111111 11111      23678999


Q ss_pred             HHHHHHHHhcCCC--CCc-eEEeeCCC
Q 017977          269 IVNLIYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       269 ~a~a~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      +++.+.+++....  ..| .+.+.++.
T Consensus       224 ia~~~~~l~~~~~~~~~G~~i~~dgg~  250 (253)
T PRK06172        224 VASAVLYLCSDGASFTTGHALMVDGGA  250 (253)
T ss_pred             HHHHHHHHhCccccCcCCcEEEECCCc
Confidence            9999999987643  445 66666653

>PRK06484 short chain dehydrogenase; Validated

Probab=99.68  E-value=1.3e-15  Score=146.54  Aligned_cols=223  Identities=16%  Similarity=0.115  Sum_probs=142.9

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCC-CCccccCcccccCcchHHhhcc-------CCCE
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTA  119 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~d~  119 (363)
                      ..+++++||||+|.||+++++.|+++|++|++++|+..+.+.+... ........+|+.|.+++.++++       .+|+
T Consensus       267 ~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  346 (520)
T PRK06484        267 ESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDV  346 (520)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            3457999999999999999999999999999999987654433221 1111234689999988877664       4799


Q ss_pred             EEEccCCCCC----CCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhhhhh
Q 017977          120 VVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVY  195 (363)
Q Consensus       120 Vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~  195 (363)
                      +|||||....    ...+.+..+..+++|+.++.++++++.....+..++|++||.++..+       .+....|..+|.
T Consensus       347 li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------~~~~~~Y~asKa  419 (520)
T PRK06484        347 LVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLA-------LPPRNAYCASKA  419 (520)
T ss_pred             EEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCC-------CCCCchhHHHHH
Confidence            9999996421    12345567889999999999999988764223357999999854332       233345655543


Q ss_pred             hcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccc-hHHHH-HHHhCCCCCCCCCccccccHHHHHHHH
Q 017977          196 CLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAK-MIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLI  273 (363)
Q Consensus       196 ~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~a~  273 (363)
                      +...|.++       ....+. ..|++++.++||.+.++....... -.... ...+..+++      .+..++|+|+++
T Consensus       420 al~~l~~~-------la~e~~-~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~dia~~~  485 (520)
T PRK06484        420 AVTMLSRS-------LACEWA-PAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIPLG------RLGDPEEVAEAI  485 (520)
T ss_pred             HHHHHHHH-------HHHHhh-hhCeEEEEEEeCCccCchhhhhccccHHHHHHHHhcCCCC------CCcCHHHHHHHH
Confidence            33222221       011111 238999999999998764211100 00001 111122221      257899999999


Q ss_pred             HHHhcCCC--CCc-eEEeeCC
Q 017977          274 YEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       274 ~~~~~~~~--~~g-~~~i~~~  291 (363)
                      +.++....  ..| .+.+.++
T Consensus       486 ~~l~s~~~~~~~G~~i~vdgg  506 (520)
T PRK06484        486 AFLASPAASYVNGATLTVDGG  506 (520)
T ss_pred             HHHhCccccCccCcEEEECCC
Confidence            99987543  445 6666555

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.68  E-value=2.5e-15  Score=131.31  Aligned_cols=220  Identities=13%  Similarity=0.083  Sum_probs=135.0

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCC----CCCccccCcccccCcchHHhhcc-------CCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GST  118 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~d  118 (363)
                      .++|+||||+|+||+++++.|+++|++|++++|+.+..+.+..    .........+|+.+.+++.++++       .+|
T Consensus         9 ~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   88 (258)
T PRK06949          9 GKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGTID   88 (258)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence            4799999999999999999999999999999998765433211    11112244578888888777664       589


Q ss_pred             EEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCC--------CCCeEEEeccceecCCcccccccC
Q 017977          119 AVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEG--------VRPSVLELVKPKYLMRAAHQEMIT  185 (363)
Q Consensus       119 ~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~--------~~~~v~~SS~~~~yg~~~~~e~~~  185 (363)
                      +|||+++.....   ....+..+..+++|+.++.++++++...  ...        ..++|++||.++ +.      ..+
T Consensus        89 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~-~~------~~~  161 (258)
T PRK06949         89 ILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAG-LR------VLP  161 (258)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccc-cC------CCC
Confidence            999999964321   2234567788999999999998877631  011        347899998733 21      012


Q ss_pred             CCcchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCcccccc
Q 017977          186 WLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIH  265 (363)
Q Consensus       186 ~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  265 (363)
                      ....|..+|.+...+.+      .+.. .+. ..++++++++||.++++....... .......... +.    ...+..
T Consensus       162 ~~~~Y~~sK~a~~~~~~------~la~-~~~-~~~i~v~~v~pG~v~t~~~~~~~~-~~~~~~~~~~-~~----~~~~~~  227 (258)
T PRK06949        162 QIGLYCMSKAAVVHMTR------AMAL-EWG-RHGINVNAICPGYIDTEINHHHWE-TEQGQKLVSM-LP----RKRVGK  227 (258)
T ss_pred             CccHHHHHHHHHHHHHH------HHHH-HHH-hcCeEEEEEeeCCCcCCcchhccC-hHHHHHHHhc-CC----CCCCcC
Confidence            23345544322221111      1111 111 238999999999999875321100 0111111111 11    123667


Q ss_pred             HHHHHHHHHHHhcCCC--CCc-eEEeeC
Q 017977          266 LDDIVNLIYEALSNPS--YRG-VINGTA  290 (363)
Q Consensus       266 v~D~a~a~~~~~~~~~--~~g-~~~i~~  290 (363)
                      .+|+++++..++....  ..| .+.+.+
T Consensus       228 p~~~~~~~~~l~~~~~~~~~G~~i~~dg  255 (258)
T PRK06949        228 PEDLDGLLLLLAADESQFINGAIISADD  255 (258)
T ss_pred             HHHHHHHHHHHhChhhcCCCCcEEEeCC
Confidence            8999999999987543  455 334433

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.68  E-value=3.7e-15  Score=133.47  Aligned_cols=223  Identities=13%  Similarity=0.034  Sum_probs=126.8

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccc----cCCC--CCccccCcccccCcchHHhhcc-------
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL----IFPG--KKTRFFPGVMIAEEPQWRDCIQ-------  115 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~~--~~~~~~~~~d~~~~~~~~~~~~-------  115 (363)
                      .+++|+||||+|+||+++++.|+++|++|++++|+..+...    +...  .....+..+|+.|.+++.++++       
T Consensus        15 ~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~   94 (306)
T PRK06197         15 SGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAYP   94 (306)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhCC
Confidence            44799999999999999999999999999999998654322    1110  1112244689999887776654       


Q ss_pred             CCCEEEEccCCCCCC-CCChhhHHHHHHHHHHH----HHHHHHHHHhCCCCCCCeEEEeccce-ecCCcccccccCCCcc
Q 017977          116 GSTAVVNLAGTPIGT-RWSSEIKKEIKESRIRV----TSKVVDLINESPEGVRPSVLELVKPK-YLMRAAHQEMITWLSD  189 (363)
Q Consensus       116 ~~d~Vi~~a~~~~~~-~~~~~~~~~~~~~n~~~----~~~l~~~~~~~~~~~~~~v~~SS~~~-~yg~~~~~e~~~~~~~  189 (363)
                      ++|+|||+||..... ....+..+..+++|+.+    +..+++.+.+  .+..++|++||.++ .++..++++..... .
T Consensus        95 ~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~--~~~~~iV~vSS~~~~~~~~~~~~~~~~~~-~  171 (306)
T PRK06197         95 RIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLP--VPGSRVVTVSSGGHRIRAAIHFDDLQWER-R  171 (306)
T ss_pred             CCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhh--CCCCEEEEECCHHHhccCCCCccccCccc-C
Confidence            589999999964322 12234456788999999    5555555555  45678999999852 33322222211100 1


Q ss_pred             hhhhhhhcccchhhHHHHHHHHHHHhcc--CCCceE--EEEeeceEEeCCCCcccchHH-HHHHHhCCCCCCCCCccccc
Q 017977          190 YCAKVYCLVSFNRGVLVCREWEGTALKV--NKDVRL--ALIRIGIVLGKDGGALAKMIP-LFMMFAGGPLGSGQQWFSWI  264 (363)
Q Consensus       190 ~~~~~~~~~~y~~~k~~~~~~~~~~~~~--~~~~~~--~ilRp~~v~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i  264 (363)
                      +.    ....|+.+|.....+.......  ..++++  +.+.||.+..+.......... .+....  ++       -..
T Consensus       172 ~~----~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~~~~~~~~~~~~~~~~--~~-------~~~  238 (306)
T PRK06197        172 YN----RVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELARNLPRALRPVATVLA--PL-------LAQ  238 (306)
T ss_pred             CC----cHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcccccCcHHHHHHHHHHH--hh-------hcC
Confidence            11    0123555554333333222211  125544  455799987664322211111 111110  00       023


Q ss_pred             cHHHHHHHHHHHhcCCC-CCceEE
Q 017977          265 HLDDIVNLIYEALSNPS-YRGVIN  287 (363)
Q Consensus       265 ~v~D~a~a~~~~~~~~~-~~g~~~  287 (363)
                      ..+..+..++.++..+. ..|.|.
T Consensus       239 ~~~~g~~~~~~~~~~~~~~~g~~~  262 (306)
T PRK06197        239 SPEMGALPTLRAATDPAVRGGQYY  262 (306)
T ss_pred             CHHHHHHHHHHHhcCCCcCCCeEE
Confidence            45667777777666554 345444

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.68  E-value=3.9e-15  Score=129.48  Aligned_cols=222  Identities=14%  Similarity=0.000  Sum_probs=136.7

Q ss_pred             CccEEEEecCc--chHHHHHHHHHHhCCCEEEEEeCCCCcccccCCC-CCccccCcccccCcchHHhhcc-------CCC
Q 017977           49 SQMTVSVTGAT--GFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GST  118 (363)
Q Consensus        49 ~~~~vlVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~d  118 (363)
                      .+++++||||+  +.||++++++|+++|++|++++|+........+. ........+|+.|.++++++++       .+|
T Consensus         6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD   85 (252)
T PRK06079          6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVGKID   85 (252)
T ss_pred             CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhCCCC
Confidence            34689999999  7999999999999999999999874221111111 1112245689999888776553       579


Q ss_pred             EEEEccCCCCC-------CCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchh
Q 017977          119 AVVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYC  191 (363)
Q Consensus       119 ~Vi~~a~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~  191 (363)
                      ++||+||....       ...+.+..+..+++|+.++..+.+++.+.-....++|++||.++..+       .+....|.
T Consensus        86 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~-------~~~~~~Y~  158 (252)
T PRK06079         86 GIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSERA-------IPNYNVMG  158 (252)
T ss_pred             EEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCcccc-------CCcchhhH
Confidence            99999996421       12345567788999999999998888764122356899998743111       12233455


Q ss_pred             hhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHH-hCCCCCCCCCccccccHHHHH
Q 017977          192 AKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMF-AGGPLGSGQQWFSWIHLDDIV  270 (363)
Q Consensus       192 ~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v~D~a  270 (363)
                      .+|.+...+.++  +..+     +. ..|+++..+.||.|-.+.......-....... ...+.      ..+..++|+|
T Consensus       159 asKaal~~l~~~--la~e-----l~-~~gI~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------~r~~~pedva  224 (252)
T PRK06079        159 IAKAALESSVRY--LARD-----LG-KKGIRVNAISAGAVKTLAVTGIKGHKDLLKESDSRTVD------GVGVTIEEVG  224 (252)
T ss_pred             HHHHHHHHHHHH--HHHH-----hh-hcCcEEEEEecCcccccccccCCChHHHHHHHHhcCcc------cCCCCHHHHH
Confidence            554443333321  1111     11 23899999999999766321110000111111 11121      1367899999


Q ss_pred             HHHHHHhcCCC--CCc-eEEeeCC
Q 017977          271 NLIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       271 ~a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      +++..++....  ..| ++.+.++
T Consensus       225 ~~~~~l~s~~~~~itG~~i~vdgg  248 (252)
T PRK06079        225 NTAAFLLSDLSTGVTGDIIYVDKG  248 (252)
T ss_pred             HHHHHHhCcccccccccEEEeCCc
Confidence            99999987543  344 5555443

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.67  E-value=4.2e-15  Score=130.57  Aligned_cols=222  Identities=11%  Similarity=0.047  Sum_probs=138.3

Q ss_pred             CccEEEEecCcc--hHHHHHHHHHHhCCCEEEEEeCCCCcc---cccCCCCCccccCcccccCcchHHhhcc-------C
Q 017977           49 SQMTVSVTGATG--FIGRRLVQRLQADNHQVRVLTRSRSKA---ELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (363)
Q Consensus        49 ~~~~vlVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~---~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (363)
                      +.++++||||++  .||++++++|+++|++|++++|+....   ..+...........+|+.|.+++.++++       .
T Consensus         6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   85 (271)
T PRK06505          6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWGK   85 (271)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence            346899999997  999999999999999999999875321   1111111111244689999988876653       5


Q ss_pred             CCEEEEccCCCCC-------CCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcc
Q 017977          117 STAVVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSD  189 (363)
Q Consensus       117 ~d~Vi~~a~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~  189 (363)
                      +|++|||||....       ...+.+..+..+++|+.++.++++++...-....++|++||.++..+       .+....
T Consensus        86 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~~-------~~~~~~  158 (271)
T PRK06505         86 LDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTRV-------MPNYNV  158 (271)
T ss_pred             CCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCcccc-------CCccch
Confidence            7999999996421       12345667788999999999988887764112256999998743221       223345


Q ss_pred             hhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHH-hCCCCCCCCCccccccHHH
Q 017977          190 YCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMF-AGGPLGSGQQWFSWIHLDD  268 (363)
Q Consensus       190 ~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v~D  268 (363)
                      |..+|.+...+.++  +..++     . ..|+++..|.||.+-.+............... ...+++      .+...+|
T Consensus       159 Y~asKaAl~~l~r~--la~el-----~-~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~p~~------r~~~pee  224 (271)
T PRK06505        159 MGVAKAALEASVRY--LAADY-----G-PQGIRVNAISAGPVRTLAGAGIGDARAIFSYQQRNSPLR------RTVTIDE  224 (271)
T ss_pred             hhhhHHHHHHHHHH--HHHHH-----h-hcCeEEEEEecCCccccccccCcchHHHHHHHhhcCCcc------ccCCHHH
Confidence            66665544444332  11111     1 24899999999999775321111100011111 111221      2567999


Q ss_pred             HHHHHHHHhcCCC--CCc-eEEeeCC
Q 017977          269 IVNLIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       269 ~a~a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      +|++++.++....  ..| .+.+.++
T Consensus       225 va~~~~fL~s~~~~~itG~~i~vdgG  250 (271)
T PRK06505        225 VGGSALYLLSDLSSGVTGEIHFVDSG  250 (271)
T ss_pred             HHHHHHHHhCccccccCceEEeecCC
Confidence            9999999987543  345 5555554

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.67  E-value=2.7e-15  Score=131.59  Aligned_cols=221  Identities=16%  Similarity=0.063  Sum_probs=134.6

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccC----CC--CCccccCcccccCcchHHhhcc-------C
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PG--KKTRFFPGVMIAEEPQWRDCIQ-------G  116 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~--~~~~~~~~~d~~~~~~~~~~~~-------~  116 (363)
                      .++++||||+|+||+++++.|+++|++|++++|+..+.....    ..  ........+|+.|.+++.++++       .
T Consensus         8 ~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   87 (265)
T PRK07062          8 GRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFGG   87 (265)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            468999999999999999999999999999999876543221    11  0111234579999888766543       5


Q ss_pred             CCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchh
Q 017977          117 STAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYC  191 (363)
Q Consensus       117 ~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~  191 (363)
                      +|+|||+||.....   ....+.....+++|+.+...+++++...  ..+..++|++||..+..+       .+....|.
T Consensus        88 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------~~~~~~y~  160 (265)
T PRK07062         88 VDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQP-------EPHMVATS  160 (265)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCC-------CCCchHhH
Confidence            79999999964322   2234456778889988877776666542  134567999999843221       12233455


Q ss_pred             hhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCc-cc-------chHHHHHHH---hCCCCCCCCCc
Q 017977          192 AKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA-LA-------KMIPLFMMF---AGGPLGSGQQW  260 (363)
Q Consensus       192 ~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~-~~-------~~~~~~~~~---~~~~~~~~~~~  260 (363)
                      .+|.+...+.++      + ...+. ..|++++.++||.+..+.... ..       .+.......   ...++      
T Consensus       161 asKaal~~~~~~------l-a~e~~-~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~------  226 (265)
T PRK07062        161 AARAGLLNLVKS------L-ATELA-PKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPL------  226 (265)
T ss_pred             HHHHHHHHHHHH------H-HHHhh-hcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCCc------
Confidence            554332222211      1 11111 238999999999987653210 00       000001110   11111      


Q ss_pred             cccccHHHHHHHHHHHhcCCC--CCc-eEEeeCC
Q 017977          261 FSWIHLDDIVNLIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       261 ~~~i~v~D~a~a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      ..+...+|+|+++..++....  ..| ++.+.++
T Consensus       227 ~r~~~p~~va~~~~~L~s~~~~~~tG~~i~vdgg  260 (265)
T PRK07062        227 GRLGRPDEAARALFFLASPLSSYTTGSHIDVSGG  260 (265)
T ss_pred             CCCCCHHHHHHHHHHHhCchhcccccceEEEcCc
Confidence            136789999999999887533  344 6666554

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.67  E-value=4.2e-15  Score=129.43  Aligned_cols=220  Identities=12%  Similarity=0.053  Sum_probs=135.3

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcc--cccCCCCCccccCcccccCcchHHhhcc-------CCCEE
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA--ELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAV  120 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~V  120 (363)
                      +++++||||+|+||++++++|+++|++|++++|+....  ..+...........+|+.|.+++.++++       .+|++
T Consensus        10 ~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D~l   89 (253)
T PRK08993         10 GKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHIDIL   89 (253)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            46899999999999999999999999999988764321  1111111112244689998888877664       58999


Q ss_pred             EEccCCCCC---CCCChhhHHHHHHHHHHHHHHHHHHHHhC--CCC-CCCeEEEeccceecCCcccccccCCCcchhhhh
Q 017977          121 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLELVKPKYLMRAAHQEMITWLSDYCAKV  194 (363)
Q Consensus       121 i~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~-~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~  194 (363)
                      ||+||....   .....+..+..+++|+.++.++++++.+.  ..+ ..++|++||..+..+       .+....|..+|
T Consensus        90 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~-------~~~~~~Y~~sK  162 (253)
T PRK08993         90 VNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQG-------GIRVPSYTASK  162 (253)
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccC-------CCCCcchHHHH
Confidence            999997432   22345678889999999999998887652  122 246899998833221       12223555554


Q ss_pred             hhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHH-HHHhCCCCCCCCCccccccHHHHHHHH
Q 017977          195 YCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLI  273 (363)
Q Consensus       195 ~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~a~  273 (363)
                      .+...+.++       ....+. ..|+++..++||.+-.+.......-.... ......+.      ..+...+|+|+++
T Consensus       163 aa~~~~~~~-------la~e~~-~~gi~v~~v~pG~v~T~~~~~~~~~~~~~~~~~~~~p~------~r~~~p~eva~~~  228 (253)
T PRK08993        163 SGVMGVTRL-------MANEWA-KHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRIPA------GRWGLPSDLMGPV  228 (253)
T ss_pred             HHHHHHHHH-------HHHHhh-hhCeEEEEEeeCcccCcchhhhccchHHHHHHHhcCCC------CCCcCHHHHHHHH
Confidence            332222211       111111 13899999999999776422110000000 11111111      1267799999999


Q ss_pred             HHHhcCCC--CCc-eEEeeC
Q 017977          274 YEALSNPS--YRG-VINGTA  290 (363)
Q Consensus       274 ~~~~~~~~--~~g-~~~i~~  290 (363)
                      ..++....  ..| .+.+.+
T Consensus       229 ~~l~s~~~~~~~G~~~~~dg  248 (253)
T PRK08993        229 VFLASSASDYINGYTIAVDG  248 (253)
T ss_pred             HHHhCccccCccCcEEEECC
Confidence            99997643  345 444443

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.67  E-value=1.7e-15  Score=132.75  Aligned_cols=204  Identities=15%  Similarity=0.145  Sum_probs=129.7

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCC---CCCccccCcccccCcchHHhhcc------CCCEE
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP---GKKTRFFPGVMIAEEPQWRDCIQ------GSTAV  120 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~------~~d~V  120 (363)
                      +++|+||||+|+||+++++.|+++|++|++++|+..+......   ......+..+|+.|.+++.++++      .+|+|
T Consensus         5 ~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~l   84 (263)
T PRK09072          5 DKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGINVL   84 (263)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCEE
Confidence            4689999999999999999999999999999998765433211   11112244689998887766543      57999


Q ss_pred             EEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhhhh
Q 017977          121 VNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVY  195 (363)
Q Consensus       121 i~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~  195 (363)
                      ||+||.....   ....+..+..+++|+.++.++++++.+.  ..+..++|++||..+.++       .+....|..+|.
T Consensus        85 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-------~~~~~~Y~~sK~  157 (263)
T PRK09072         85 INNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIG-------YPGYASYCASKF  157 (263)
T ss_pred             EECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcC-------CCCccHHHHHHH
Confidence            9999874321   2234556778899999999998888642  133456888888744333       122234554432


Q ss_pred             hcccchhhHHHHHHHHHHHhcc-CCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHHH
Q 017977          196 CLVSFNRGVLVCREWEGTALKV-NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY  274 (363)
Q Consensus       196 ~~~~y~~~k~~~~~~~~~~~~~-~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~  274 (363)
                      ....+         ........ ..++.++.+.|+.+.++.....   .   .... ..+     ...+..++|+|++++
T Consensus       158 a~~~~---------~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~---~---~~~~-~~~-----~~~~~~~~~va~~i~  216 (263)
T PRK09072        158 ALRGF---------SEALRRELADTGVRVLYLAPRATRTAMNSEA---V---QALN-RAL-----GNAMDDPEDVAAAVL  216 (263)
T ss_pred             HHHHH---------HHHHHHHhcccCcEEEEEecCcccccchhhh---c---cccc-ccc-----cCCCCCHHHHHHHHH
Confidence            21111         11111111 2389999999998865532110   0   0000 000     113678999999999


Q ss_pred             HHhcCCC
Q 017977          275 EALSNPS  281 (363)
Q Consensus       275 ~~~~~~~  281 (363)
                      .++++..
T Consensus       217 ~~~~~~~  223 (263)
T PRK09072        217 QAIEKER  223 (263)
T ss_pred             HHHhCCC
Confidence            9998753

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.67  E-value=1e-15  Score=133.92  Aligned_cols=223  Identities=17%  Similarity=0.137  Sum_probs=136.9

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCE-EEEEeCCCCcccc----cCCCCCccccCcccccCcchHHhhcc-------C
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQ-VRVLTRSRSKAEL----IFPGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~----~~~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (363)
                      ..++|+||||+|+||+++++.|+++|++ |++++|+..+...    +...........+|+.+.+++.++++       +
T Consensus         5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   84 (260)
T PRK06198          5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFGR   84 (260)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            3468999999999999999999999998 9999998654331    11111111234579998887776654       5


Q ss_pred             CCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCC-CCCeEEEeccceecCCcccccccCCCcch
Q 017977          117 STAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLELVKPKYLMRAAHQEMITWLSDY  190 (363)
Q Consensus       117 ~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~-~~~~v~~SS~~~~yg~~~~~e~~~~~~~~  190 (363)
                      +|+|||+++.....   ....+..+..+++|+.++.++++++.+.  ..+ ..++|++||. ..++.      .+....|
T Consensus        85 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~-~~~~~------~~~~~~Y  157 (260)
T PRK06198         85 LDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSM-SAHGG------QPFLAAY  157 (260)
T ss_pred             CCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCc-ccccC------CCCcchh
Confidence            79999999974322   2244455678999999999998888653  121 3468999988 43331      1222345


Q ss_pred             hhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc----cchH-HHHHHHhCCCCCCCCCcccccc
Q 017977          191 CAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL----AKMI-PLFMMFAGGPLGSGQQWFSWIH  265 (363)
Q Consensus       191 ~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~i~  265 (363)
                      ...|.....|.++      + ...+. ..++.++.++|+.+.++.....    .... ........     ......+++
T Consensus       158 ~~sK~a~~~~~~~------~-a~e~~-~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~  224 (260)
T PRK06198        158 CASKGALATLTRN------A-AYALL-RNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAA-----TQPFGRLLD  224 (260)
T ss_pred             HHHHHHHHHHHHH------H-HHHhc-ccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhc-----cCCccCCcC
Confidence            5443222211110      0 11111 2379999999999988753210    0011 11111111     111234689


Q ss_pred             HHHHHHHHHHHhcCCC--CCc-eEEeeCC
Q 017977          266 LDDIVNLIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       266 v~D~a~a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      ++|+++++..++....  ..| .+.+.++
T Consensus       225 ~~~~a~~~~~l~~~~~~~~~G~~~~~~~~  253 (260)
T PRK06198        225 PDEVARAVAFLLSDESGLMTGSVIDFDQS  253 (260)
T ss_pred             HHHHHHHHHHHcChhhCCccCceEeECCc
Confidence            9999999999886543  234 6666654

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.67  E-value=5.9e-15  Score=127.97  Aligned_cols=218  Identities=15%  Similarity=0.049  Sum_probs=131.8

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCC-CCcccc----cCCCCCccccCcccccCcchHHhhcc-------CC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRS-RSKAEL----IFPGKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~----~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (363)
                      ++.++||||+|+||+++++.|+++|++|++..+. ......    +...........+|+.|.+++.++++       ++
T Consensus         3 ~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   82 (246)
T PRK12938          3 QRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGEI   82 (246)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            3689999999999999999999999999886543 222111    11111111233579998887776654       58


Q ss_pred             CEEEEccCCCCC---CCCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhh
Q 017977          118 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCA  192 (363)
Q Consensus       118 d~Vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~  192 (363)
                      |+|||+|+....   .....+..+.++++|+.++..+.+++.+.  ..+..++|++||..+.++       .+....|..
T Consensus        83 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-------~~~~~~y~~  155 (246)
T PRK12938         83 DVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKG-------QFGQTNYST  155 (246)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCC-------CCCChhHHH
Confidence            999999997432   22345567788999999977766655431  145678999998743322       122334544


Q ss_pred             hhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHH-HHH-hCCCCCCCCCccccccHHHHH
Q 017977          193 KVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF-MMF-AGGPLGSGQQWFSWIHLDDIV  270 (363)
Q Consensus       193 ~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~i~v~D~a  270 (363)
                      .|.+...+.      ..+..+ +. ..+++++.++|+.+.++.....   .+.. ... ...+      ...+..++|++
T Consensus       156 sK~a~~~~~------~~l~~~-~~-~~gi~v~~i~pg~~~t~~~~~~---~~~~~~~~~~~~~------~~~~~~~~~v~  218 (246)
T PRK12938        156 AKAGIHGFT------MSLAQE-VA-TKGVTVNTVSPGYIGTDMVKAI---RPDVLEKIVATIP------VRRLGSPDEIG  218 (246)
T ss_pred             HHHHHHHHH------HHHHHH-hh-hhCeEEEEEEecccCCchhhhc---ChHHHHHHHhcCC------ccCCcCHHHHH
Confidence            432211111      111111 11 2389999999999987743211   1111 111 1111      22357799999


Q ss_pred             HHHHHHhcCCC--CCc-eEEeeCC
Q 017977          271 NLIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       271 ~a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      ++++.++....  ..| .+.+.++
T Consensus       219 ~~~~~l~~~~~~~~~g~~~~~~~g  242 (246)
T PRK12938        219 SIVAWLASEESGFSTGADFSLNGG  242 (246)
T ss_pred             HHHHHHcCcccCCccCcEEEECCc
Confidence            99998886543  334 6666554

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.67  E-value=1.8e-15  Score=131.69  Aligned_cols=221  Identities=14%  Similarity=0.089  Sum_probs=135.8

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCC----CCCccccCcccccCcchHHhhcc-------CCCE
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GSTA  119 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~d~  119 (363)
                      ++++||||+|+||+++++.|+++|++|++++|+..+......    .........+|+.|.+++.++++       .+|+
T Consensus         2 k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   81 (252)
T PRK07677          2 KVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRIDA   81 (252)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCccE
Confidence            689999999999999999999999999999998765432211    11112245679988887776553       5799


Q ss_pred             EEEccCCCCC---CCCChhhHHHHHHHHHHHHHHHHHHHHhC--CCC-CCCeEEEeccceecCCcccccccCCCcchhhh
Q 017977          120 VVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLELVKPKYLMRAAHQEMITWLSDYCAK  193 (363)
Q Consensus       120 Vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~-~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~  193 (363)
                      |||++|....   ...+.+..+..+++|+.++.++++++.+.  ..+ ..++|++||..+..       ..+....|..+
T Consensus        82 lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~-------~~~~~~~Y~~s  154 (252)
T PRK07677         82 LINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWD-------AGPGVIHSAAA  154 (252)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhcc-------CCCCCcchHHH
Confidence            9999985322   23345566889999999999999998542  122 35688888773211       11222345555


Q ss_pred             hhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCC-cccchHHHHH-HHhCCCCCCCCCccccccHHHHHH
Q 017977          194 VYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGG-ALAKMIPLFM-MFAGGPLGSGQQWFSWIHLDDIVN  271 (363)
Q Consensus       194 ~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~D~a~  271 (363)
                      |.+...+.+      . ....+...+|+++..++||.+.++... .....-.... .....++      ..+...+|+++
T Consensus       155 Kaa~~~~~~------~-la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~va~  221 (252)
T PRK07677        155 KAGVLAMTR------T-LAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVPL------GRLGTPEEIAG  221 (252)
T ss_pred             HHHHHHHHH------H-HHHHhCcccCeEEEEEeecccccccccccccCCHHHHHHHhccCCC------CCCCCHHHHHH
Confidence            433222221      1 111122224899999999999854321 1000001111 1111111      13678999999


Q ss_pred             HHHHHhcCCC--CCc-eEEeeCC
Q 017977          272 LIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       272 a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      ++..++....  ..| .+.+.++
T Consensus       222 ~~~~l~~~~~~~~~g~~~~~~gg  244 (252)
T PRK07677        222 LAYFLLSDEAAYINGTCITMDGG  244 (252)
T ss_pred             HHHHHcCccccccCCCEEEECCC
Confidence            9988886532  344 5666554

>TIGR02415 23BDH acetoin reductases

Probab=99.67  E-value=1e-15  Score=133.45  Aligned_cols=221  Identities=19%  Similarity=0.109  Sum_probs=133.9

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccC----CCCCccccCcccccCcchHHhhcc-------CCCE
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GSTA  119 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~  119 (363)
                      ++++||||+|+||+++++.|+++|++|+++.|+........    ..........+|+.|.+++.+++.       .+|+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~   80 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV   80 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            37999999999999999999999999999999865432221    111112244579999888776653       5799


Q ss_pred             EEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCC-CCCeEEEeccceecCCcccccccCCCcchhhh
Q 017977          120 VVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLELVKPKYLMRAAHQEMITWLSDYCAK  193 (363)
Q Consensus       120 Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~-~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~  193 (363)
                      |||+++.....   ..+.+..+..+++|+.++..+++++.+.  ..+ ..++|++||..+.++       .+....|..+
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-------~~~~~~Y~~s  153 (254)
T TIGR02415        81 MVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEG-------NPILSAYSST  153 (254)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCC-------CCCCcchHHH
Confidence            99999864321   2344556788999999988777766542  022 357999998755444       2233345544


Q ss_pred             hhhcccchhhHHHHHHHHHHHh-c-cCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCC-------CCCCccccc
Q 017977          194 VYCLVSFNRGVLVCREWEGTAL-K-VNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLG-------SGQQWFSWI  264 (363)
Q Consensus       194 ~~~~~~y~~~k~~~~~~~~~~~-~-~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~i  264 (363)
                      |.          ....+..... . ...++.+++++|+.+..+....   +........+.+++       .......+.
T Consensus       154 K~----------a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (254)
T TIGR02415       154 KF----------AVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEE---IDEETSEIAGKPIGEGFEEFSSEIALGRPS  220 (254)
T ss_pred             HH----------HHHHHHHHHHHHhcccCeEEEEEecCcccChhhhh---hhhhhhhcccCchHHHHHHHHhhCCCCCCC
Confidence            32          2222211111 1 1238999999999886653211   10000000000000       000111368


Q ss_pred             cHHHHHHHHHHHhcCCC--CCceEEeeCC
Q 017977          265 HLDDIVNLIYEALSNPS--YRGVINGTAP  291 (363)
Q Consensus       265 ~v~D~a~a~~~~~~~~~--~~g~~~i~~~  291 (363)
                      .++|+++++..+++...  ..|.+...++
T Consensus       221 ~~~~~a~~~~~l~~~~~~~~~g~~~~~d~  249 (254)
T TIGR02415       221 EPEDVAGLVSFLASEDSDYITGQSILVDG  249 (254)
T ss_pred             CHHHHHHHHHhhcccccCCccCcEEEecC
Confidence            89999999999998754  3465554443

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.67  E-value=1.7e-15  Score=148.52  Aligned_cols=227  Identities=18%  Similarity=0.079  Sum_probs=136.8

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCC------CCCccccCcccccCcchHHhhcc------
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP------GKKTRFFPGVMIAEEPQWRDCIQ------  115 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~------  115 (363)
                      ..+++||||||+|+||++++++|+++|++|++++|+.........      .........+|+.|.+++.++++      
T Consensus       412 l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~  491 (676)
T TIGR02632       412 LARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAY  491 (676)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            345799999999999999999999999999999998754332211      00111234689999988877765      


Q ss_pred             -CCCEEEEccCCCCCCC---CChhhHHHHHHHHHHHHHHHHHHHHhC--CCC-CCCeEEEeccceecCCcccccccCCCc
Q 017977          116 -GSTAVVNLAGTPIGTR---WSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLELVKPKYLMRAAHQEMITWLS  188 (363)
Q Consensus       116 -~~d~Vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~-~~~~v~~SS~~~~yg~~~~~e~~~~~~  188 (363)
                       ++|+|||+||......   ...+..+..+++|+.+...+.+.+...  ..+ ..++|++||..++++       .+...
T Consensus       492 g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~-------~~~~~  564 (676)
T TIGR02632       492 GGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYA-------GKNAS  564 (676)
T ss_pred             CCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCC-------CCCCH
Confidence             6899999999743322   234456778889998877665444321  022 346999999755544       12223


Q ss_pred             chhhhhhhcccchhhHHHHHHHHHHHhcc--CCCceEEEEeeceEEe-CCCCcccchHHHHHHHhCCC-------CCCCC
Q 017977          189 DYCAKVYCLVSFNRGVLVCREWEGTALKV--NKDVRLALIRIGIVLG-KDGGALAKMIPLFMMFAGGP-------LGSGQ  258 (363)
Q Consensus       189 ~~~~~~~~~~~y~~~k~~~~~~~~~~~~~--~~~~~~~ilRp~~v~g-~~~~~~~~~~~~~~~~~~~~-------~~~~~  258 (363)
                      .|..+          |.....+.......  ..|+++..++|+.++. ..... ..+........+.+       .....
T Consensus       565 aY~aS----------KaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~-~~~~~~~~~~~~~~~~~~~~~~~~r~  633 (676)
T TIGR02632       565 AYSAA----------KAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWD-GEWREERAAAYGIPADELEEHYAKRT  633 (676)
T ss_pred             HHHHH----------HHHHHHHHHHHHHHhcccCeEEEEEECCceecCccccc-ccchhhhhhcccCChHHHHHHHHhcC
Confidence            45444          42323222221111  2389999999999873 22110 00100000000000       00111


Q ss_pred             CccccccHHHHHHHHHHHhcCCC--CCc-eEEeeCCC
Q 017977          259 QWFSWIHLDDIVNLIYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       259 ~~~~~i~v~D~a~a~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      ....+++++|+|+++..++....  ..| ++++.+|.
T Consensus       634 ~l~r~v~peDVA~av~~L~s~~~~~~TG~~i~vDGG~  670 (676)
T TIGR02632       634 LLKRHIFPADIAEAVFFLASSKSEKTTGCIITVDGGV  670 (676)
T ss_pred             CcCCCcCHHHHHHHHHHHhCCcccCCcCcEEEECCCc
Confidence            22346899999999998886433  334 77777764

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.67  E-value=2.8e-15  Score=127.86  Aligned_cols=203  Identities=11%  Similarity=0.093  Sum_probs=133.4

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc----CCCEEEEccCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ----GSTAVVNLAGT  126 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~----~~d~Vi~~a~~  126 (363)
                      |+++||||+|+||+++++.|+++|++|++++|+.++......... .....+|+.|.+++.++++    .+|++||+|+.
T Consensus         1 m~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~-~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ag~   79 (223)
T PRK05884          1 VEVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELD-VDAIVCDNTDPASLEEARGLFPHHLDTIVNVPAP   79 (223)
T ss_pred             CeEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcc-CcEEecCCCCHHHHHHHHHHHhhcCcEEEECCCc
Confidence            489999999999999999999999999999998765443222111 1144579999888877664    58999999974


Q ss_pred             CCC---C---CC--ChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhcc
Q 017977          127 PIG---T---RW--SSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLV  198 (363)
Q Consensus       127 ~~~---~---~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~  198 (363)
                      ...   .   ..  ..+..+..+++|+.++.++++++.+......++|++||. .          .+....|..+|.+..
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~-~----------~~~~~~Y~asKaal~  148 (223)
T PRK05884         80 SWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPE-N----------PPAGSAEAAIKAALS  148 (223)
T ss_pred             cccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecC-C----------CCCccccHHHHHHHH
Confidence            211   0   01  234567889999999999999988641123579999887 2          122345666654444


Q ss_pred             cchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHHHHHhc
Q 017977          199 SFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALS  278 (363)
Q Consensus       199 ~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~  278 (363)
                      .|.++  +..     .+. ..|+++..+.||.+..+..          ......+         .-.++|+++++..++.
T Consensus       149 ~~~~~--la~-----e~~-~~gI~v~~v~PG~v~t~~~----------~~~~~~p---------~~~~~~ia~~~~~l~s  201 (223)
T PRK05884        149 NWTAG--QAA-----VFG-TRGITINAVACGRSVQPGY----------DGLSRTP---------PPVAAEIARLALFLTT  201 (223)
T ss_pred             HHHHH--HHH-----Hhh-hcCeEEEEEecCccCchhh----------hhccCCC---------CCCHHHHHHHHHHHcC
Confidence            33321  111     111 2389999999998865421          0000111         1268999999999887


Q ss_pred             CCC--CCc-eEEeeCCC
Q 017977          279 NPS--YRG-VINGTAPN  292 (363)
Q Consensus       279 ~~~--~~g-~~~i~~~~  292 (363)
                      ...  ..| ++.+.++.
T Consensus       202 ~~~~~v~G~~i~vdgg~  218 (223)
T PRK05884        202 PAARHITGQTLHVSHGA  218 (223)
T ss_pred             chhhccCCcEEEeCCCe
Confidence            543  344 55665543

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.67  E-value=4.1e-15  Score=128.35  Aligned_cols=195  Identities=12%  Similarity=0.101  Sum_probs=124.0

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCCCCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIG  129 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~~~~  129 (363)
                      +++++||||+|+||++++++|+++|++|++++|+..+......... .....+|+.|.+++.+.+.++|++|||||....
T Consensus        14 ~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~~~~-~~~~~~D~~~~~~~~~~~~~iDilVnnAG~~~~   92 (245)
T PRK12367         14 GKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESNDESP-NEWIKWECGKEESLDKQLASLDVLILNHGINPG   92 (245)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhccCC-CeEEEeeCCCHHHHHHhcCCCCEEEECCccCCc
Confidence            4689999999999999999999999999999998632211111111 123457999999998888899999999997433


Q ss_pred             CCCChhhHHHHHHHHHHHHHHHHHHHHhC-CC----CCCCeEEEeccceecCCcccccccCCCcchhhhhhhcccchhhH
Q 017977          130 TRWSSEIKKEIKESRIRVTSKVVDLINES-PE----GVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRGV  204 (363)
Q Consensus       130 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~----~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~~y~~~k  204 (363)
                      ...+.+..+..+++|+.++.++++++.+. ..    +...++..||.++ ..       .+..+.|..+|.+...+.  .
T Consensus        93 ~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~-~~-------~~~~~~Y~aSKaal~~~~--~  162 (245)
T PRK12367         93 GRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAE-IQ-------PALSPSYEISKRLIGQLV--S  162 (245)
T ss_pred             CCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccc-cC-------CCCCchhHHHHHHHHHHH--H
Confidence            34456678889999999999999988763 11    1222444444422 11       112234655543221110  0


Q ss_pred             HHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHHHHHhcCCC
Q 017977          205 LVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS  281 (363)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~  281 (363)
                       +..+..  ......++.+..+.|+.+..+..                +       ...+..+|+|+.++.++.+..
T Consensus       163 -l~~~l~--~e~~~~~i~v~~~~pg~~~t~~~----------------~-------~~~~~~~~vA~~i~~~~~~~~  213 (245)
T PRK12367        163 -LKKNLL--DKNERKKLIIRKLILGPFRSELN----------------P-------IGIMSADFVAKQILDQANLGL  213 (245)
T ss_pred             -HHHHHH--HhhcccccEEEEecCCCcccccC----------------c-------cCCCCHHHHHHHHHHHHhcCC
Confidence             001111  11122378888888877543210                0       125779999999999997654

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.66  E-value=3.5e-15  Score=131.14  Aligned_cols=221  Identities=11%  Similarity=0.031  Sum_probs=136.5

Q ss_pred             ccEEEEecCc--chHHHHHHHHHHhCCCEEEEEeCCCC---cccccCCCCCccccCcccccCcchHHhhcc-------CC
Q 017977           50 QMTVSVTGAT--GFIGRRLVQRLQADNHQVRVLTRSRS---KAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (363)
Q Consensus        50 ~~~vlVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~---~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (363)
                      .++++||||+  +.||+++++.|+++|++|++.+|+..   ..+.+...........+|+.|.+++.++++       .+
T Consensus         5 ~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g~i   84 (274)
T PRK08415          5 GKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLGKI   84 (274)
T ss_pred             CcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            4689999997  79999999999999999999998742   112221111101245689999988776653       57


Q ss_pred             CEEEEccCCCCC-------CCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcch
Q 017977          118 TAVVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDY  190 (363)
Q Consensus       118 d~Vi~~a~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~  190 (363)
                      |++||+||....       ...+.+..+..+++|+.++..+.+++.+.-....++|++||.++..+       .+....|
T Consensus        85 DilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~-------~~~~~~Y  157 (274)
T PRK08415         85 DFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVKY-------VPHYNVM  157 (274)
T ss_pred             CEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCccC-------CCcchhh
Confidence            999999996321       12345667889999999999998888764112257999998743221       1222345


Q ss_pred             hhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHH-HhCCCCCCCCCccccccHHHH
Q 017977          191 CAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMM-FAGGPLGSGQQWFSWIHLDDI  269 (363)
Q Consensus       191 ~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~D~  269 (363)
                      ..+|.+...|.++  ++.+     +. ..|+.+..+.||.+..+.............. ....|+      ..+..++|+
T Consensus       158 ~asKaal~~l~~~--la~e-----l~-~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~pl------~r~~~pedv  223 (274)
T PRK08415        158 GVAKAALESSVRY--LAVD-----LG-KKGIRVNAISAGPIKTLAASGIGDFRMILKWNEINAPL------KKNVSIEEV  223 (274)
T ss_pred             hhHHHHHHHHHHH--HHHH-----hh-hcCeEEEEEecCccccHHHhccchhhHHhhhhhhhCch------hccCCHHHH
Confidence            5555443333321  1111     11 2389999999999876521110010000000 011111      125789999


Q ss_pred             HHHHHHHhcCCC--CCc-eEEeeCC
Q 017977          270 VNLIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       270 a~a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      |++++.++....  ..| .+.+.++
T Consensus       224 a~~v~fL~s~~~~~itG~~i~vdGG  248 (274)
T PRK08415        224 GNSGMYLLSDLSSGVTGEIHYVDAG  248 (274)
T ss_pred             HHHHHHHhhhhhhcccccEEEEcCc
Confidence            999999987543  445 5555554

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.66  E-value=8.1e-15  Score=128.43  Aligned_cols=222  Identities=14%  Similarity=0.024  Sum_probs=133.8

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCccc---ccCCCCCccccCcccccCcchHHhhcc-------CCCE
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE---LIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTA  119 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~  119 (363)
                      .++++||||+|+||+++++.|+++|++|++++|+.....   .+...........+|+.+.+++.++++       .+|+
T Consensus         6 ~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   85 (263)
T PRK08226          6 GKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRIDI   85 (263)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            468999999999999999999999999999999864211   111111112244689998888776654       5799


Q ss_pred             EEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhhh
Q 017977          120 VVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKV  194 (363)
Q Consensus       120 Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~  194 (363)
                      |||+||.....   ....+..+..+++|+.++.++++++.+.  ..+..++|++||..+.+.      ..+....|..+|
T Consensus        86 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~------~~~~~~~Y~~sK  159 (263)
T PRK08226         86 LVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMV------ADPGETAYALTK  159 (263)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccc------CCCCcchHHHHH
Confidence            99999964322   2234455678999999999998887642  134567999988732111      012223455443


Q ss_pred             hhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc------cchHHHH-HHHhCCCCCCCCCccccccHH
Q 017977          195 YCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL------AKMIPLF-MMFAGGPLGSGQQWFSWIHLD  267 (363)
Q Consensus       195 ~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~------~~~~~~~-~~~~~~~~~~~~~~~~~i~v~  267 (363)
                      .+...+.+       .....+. ..+++++.++|+.+.++.....      ....... ....+.|+      ..+..++
T Consensus       160 ~a~~~~~~-------~la~~~~-~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~------~~~~~~~  225 (263)
T PRK08226        160 AAIVGLTK-------SLAVEYA-QSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPL------RRLADPL  225 (263)
T ss_pred             HHHHHHHH-------HHHHHhc-ccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCCC------CCCCCHH
Confidence            22211111       1111111 2389999999999987632110      0001111 11112222      1357899


Q ss_pred             HHHHHHHHHhcCCC--CCc-eEEeeCC
Q 017977          268 DIVNLIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       268 D~a~a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      |+|+++..++....  ..| .+.+.++
T Consensus       226 ~va~~~~~l~~~~~~~~~g~~i~~dgg  252 (263)
T PRK08226        226 EVGELAAFLASDESSYLTGTQNVIDGG  252 (263)
T ss_pred             HHHHHHHHHcCchhcCCcCceEeECCC
Confidence            99999988886432  455 5555544

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.66  E-value=9.5e-15  Score=124.61  Aligned_cols=200  Identities=15%  Similarity=0.044  Sum_probs=132.5

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhc---c--CCCEEEEcc
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI---Q--GSTAVVNLA  124 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~---~--~~d~Vi~~a  124 (363)
                      |++++||||+|+||++++++|+++|++|++++|+.++.+.+....  .....+|+.+.+++.+++   .  .+|+|||++
T Consensus         1 ~~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~~~--~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~a   78 (222)
T PRK06953          1 MKTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQALG--AEALALDVADPASVAGLAWKLDGEALDAAVYVA   78 (222)
T ss_pred             CceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHhcc--ceEEEecCCCHHHHHHHHHHhcCCCCCEEEECC
Confidence            468999999999999999999999999999999876554433221  124568999988887753   2  489999999


Q ss_pred             CCCCCC-----CCChhhHHHHHHHHHHHHHHHHHHHHhC-CCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhcc
Q 017977          125 GTPIGT-----RWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLV  198 (363)
Q Consensus       125 ~~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~  198 (363)
                      +.....     ....+..+..+++|+.++.++++++.+. .....++|++||..+.++..+    ..+...|...     
T Consensus        79 g~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~----~~~~~~Y~~s-----  149 (222)
T PRK06953         79 GVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDAT----GTTGWLYRAS-----  149 (222)
T ss_pred             CcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCccccccccc----CCCccccHHh-----
Confidence            874221     2245667889999999999999998763 122346889988755554111    1111134444     


Q ss_pred             cchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHHHHHhc
Q 017977          199 SFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALS  278 (363)
Q Consensus       199 ~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~  278 (363)
                           |...............+++++.++|+.+..+....                      ...+..++.++.+..++.
T Consensus       150 -----K~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~~~~~----------------------~~~~~~~~~~~~~~~~~~  202 (222)
T PRK06953        150 -----KAALNDALRAASLQARHATCIALHPGWVRTDMGGA----------------------QAALDPAQSVAGMRRVIA  202 (222)
T ss_pred             -----HHHHHHHHHHHhhhccCcEEEEECCCeeecCCCCC----------------------CCCCCHHHHHHHHHHHHH
Confidence                 32222222222222238999999999987763210                      013678899999988876


Q ss_pred             CCC--CCceEE
Q 017977          279 NPS--YRGVIN  287 (363)
Q Consensus       279 ~~~--~~g~~~  287 (363)
                      ...  ..++|.
T Consensus       203 ~~~~~~~~~~~  213 (222)
T PRK06953        203 QATRRDNGRFF  213 (222)
T ss_pred             hcCcccCceEE
Confidence            444  334444

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.66  E-value=5.4e-15  Score=130.20  Aligned_cols=211  Identities=13%  Similarity=0.040  Sum_probs=129.9

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCccccc-----------CCCCCccccCcccccCcchHHhhcc---
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI-----------FPGKKTRFFPGVMIAEEPQWRDCIQ---  115 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----------~~~~~~~~~~~~d~~~~~~~~~~~~---  115 (363)
                      +++++||||+|+||+++++.|+++|++|++++|+......+           ...........+|+.+.+++.++++   
T Consensus         6 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~   85 (273)
T PRK08278          6 GKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKAV   85 (273)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHH
Confidence            46899999999999999999999999999999986532111           0111112244589999988876664   


Q ss_pred             ----CCCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCC
Q 017977          116 ----GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITW  186 (363)
Q Consensus       116 ----~~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~  186 (363)
                          ++|+|||+||.....   ..+.+..+..+++|+.++.++++++...  ..+..++|++||..+.-+     ...+.
T Consensus        86 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~-----~~~~~  160 (273)
T PRK08278         86 ERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDP-----KWFAP  160 (273)
T ss_pred             HHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhccc-----cccCC
Confidence                689999999974322   2334556778999999999999999753  123346888887622100     00022


Q ss_pred             CcchhhhhhhcccchhhHHHHHHHHHHHhcc--CCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccc
Q 017977          187 LSDYCAKVYCLVSFNRGVLVCREWEGTALKV--NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWI  264 (363)
Q Consensus       187 ~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~--~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  264 (363)
                      ...|..+|+          ....+.......  ..++.++.+.|+.++...      ....+  ..+.     .....+.
T Consensus       161 ~~~Y~~sK~----------a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~------~~~~~--~~~~-----~~~~~~~  217 (273)
T PRK08278        161 HTAYTMAKY----------GMSLCTLGLAEEFRDDGIAVNALWPRTTIATA------AVRNL--LGGD-----EAMRRSR  217 (273)
T ss_pred             cchhHHHHH----------HHHHHHHHHHHHhhhcCcEEEEEeCCCccccH------HHHhc--cccc-----ccccccC
Confidence            334555443          322222211111  238999999998433211      00000  0011     1112367


Q ss_pred             cHHHHHHHHHHHhcCCC--CCceEEe
Q 017977          265 HLDDIVNLIYEALSNPS--YRGVING  288 (363)
Q Consensus       265 ~v~D~a~a~~~~~~~~~--~~g~~~i  288 (363)
                      ..+|+|++++.++....  ..|.+.+
T Consensus       218 ~p~~va~~~~~l~~~~~~~~~G~~~~  243 (273)
T PRK08278        218 TPEIMADAAYEILSRPAREFTGNFLI  243 (273)
T ss_pred             CHHHHHHHHHHHhcCccccceeEEEe
Confidence            89999999999987644  4554443

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.66  E-value=7.2e-15  Score=128.48  Aligned_cols=222  Identities=13%  Similarity=0.035  Sum_probs=133.3

Q ss_pred             CccEEEEecC--cchHHHHHHHHHHhCCCEEEEEeCCCCc---ccccCCCCCccccCcccccCcchHHhhcc-------C
Q 017977           49 SQMTVSVTGA--TGFIGRRLVQRLQADNHQVRVLTRSRSK---AELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (363)
Q Consensus        49 ~~~~vlVtGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~~---~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (363)
                      ..++++||||  ++.||+++++.|+++|++|++..|+...   ...+...........+|+.|.+++.++++       +
T Consensus         5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   84 (261)
T PRK08690          5 QGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWDG   84 (261)
T ss_pred             CCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            3468999997  6799999999999999999998775321   11221111111245689999988876653       5


Q ss_pred             CCEEEEccCCCCCC--------CCChhhHHHHHHHHHHHHHHHHHHHHhC-CCCCCCeEEEeccceecCCcccccccCCC
Q 017977          117 STAVVNLAGTPIGT--------RWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLELVKPKYLMRAAHQEMITWL  187 (363)
Q Consensus       117 ~d~Vi~~a~~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~SS~~~~yg~~~~~e~~~~~  187 (363)
                      +|++|||||.....        ....+..+..+++|+.+...+.+++.+. ..+..++|++||.++..+       .+..
T Consensus        85 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~~-------~~~~  157 (261)
T PRK08690         85 LDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRA-------IPNY  157 (261)
T ss_pred             CcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEcccccccC-------CCCc
Confidence            89999999974321        1223345667889999988887776553 122356889888743211       2233


Q ss_pred             cchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHH-HHhCCCCCCCCCccccccH
Q 017977          188 SDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFM-MFAGGPLGSGQQWFSWIHL  266 (363)
Q Consensus       188 ~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v  266 (363)
                      ..|..+|.+...+.++       ....+. ..|+++..+.||.+-.+............. .....|+      ..+..+
T Consensus       158 ~~Y~asKaal~~l~~~-------la~e~~-~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------~r~~~p  223 (261)
T PRK08690        158 NVMGMAKASLEAGIRF-------TAACLG-KEGIRCNGISAGPIKTLAASGIADFGKLLGHVAAHNPL------RRNVTI  223 (261)
T ss_pred             ccchhHHHHHHHHHHH-------HHHHhh-hcCeEEEEEecCcccchhhhcCCchHHHHHHHhhcCCC------CCCCCH
Confidence            4455554333332221       111111 238999999999997653211110011111 1111122      236789


Q ss_pred             HHHHHHHHHHhcCCC--CCc-eEEeeCC
Q 017977          267 DDIVNLIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       267 ~D~a~a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      +|+|+++..++....  ..| .+.+.++
T Consensus       224 eevA~~v~~l~s~~~~~~tG~~i~vdgG  251 (261)
T PRK08690        224 EEVGNTAAFLLSDLSSGITGEITYVDGG  251 (261)
T ss_pred             HHHHHHHHHHhCcccCCcceeEEEEcCC
Confidence            999999999997543  345 5555554

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.66  E-value=7.7e-15  Score=128.30  Aligned_cols=222  Identities=12%  Similarity=0.023  Sum_probs=130.7

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCc-ccc----cCCC-CCccccCcccccCcchHHhhcc-------
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK-AEL----IFPG-KKTRFFPGVMIAEEPQWRDCIQ-------  115 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~----~~~~-~~~~~~~~~d~~~~~~~~~~~~-------  115 (363)
                      .+++++||||+++||+++++.|+++|++|+++.|+..+ .+.    +... ........+|+.|.+++.++++       
T Consensus         7 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   86 (260)
T PRK08416          7 KGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDFD   86 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            34799999999999999999999999999988764432 211    1111 1112244679999887776654       


Q ss_pred             CCCEEEEccCCCCC---------CCCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCccccccc
Q 017977          116 GSTAVVNLAGTPIG---------TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMI  184 (363)
Q Consensus       116 ~~d~Vi~~a~~~~~---------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~  184 (363)
                      .+|++||+|+....         .....+.....+++|+.+...+.+.+.+.  ..+..++|++||.++..+       .
T Consensus        87 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------~  159 (260)
T PRK08416         87 RVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVY-------I  159 (260)
T ss_pred             CccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccC-------C
Confidence            57999999975211         11233455678888988877666655542  134457999999843111       2


Q ss_pred             CCCcchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHH-HHHhCCCCCCCCCcccc
Q 017977          185 TWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSW  263 (363)
Q Consensus       185 ~~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  263 (363)
                      +....|..+|.+...|.++      +.. .+. ..|+++..+.||.+-.+............ ......++      ..+
T Consensus       160 ~~~~~Y~asK~a~~~~~~~------la~-el~-~~gi~v~~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~------~r~  225 (260)
T PRK08416        160 ENYAGHGTSKAAVETMVKY------AAT-ELG-EKNIRVNAVSGGPIDTDALKAFTNYEEVKAKTEELSPL------NRM  225 (260)
T ss_pred             CCcccchhhHHHHHHHHHH------HHH-Hhh-hhCeEEEEEeeCcccChhhhhccCCHHHHHHHHhcCCC------CCC
Confidence            2233555554333222221      011 111 13899999999988655311111100101 11111121      126


Q ss_pred             ccHHHHHHHHHHHhcCCC--CCc-eEEeeCC
Q 017977          264 IHLDDIVNLIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       264 i~v~D~a~a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      ..++|+|.+++.++....  ..| .+.+.++
T Consensus       226 ~~p~~va~~~~~l~~~~~~~~~G~~i~vdgg  256 (260)
T PRK08416        226 GQPEDLAGACLFLCSEKASWLTGQTIVVDGG  256 (260)
T ss_pred             CCHHHHHHHHHHHcChhhhcccCcEEEEcCC
Confidence            789999999999986543  345 5555444

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.66  E-value=4.9e-15  Score=130.47  Aligned_cols=208  Identities=14%  Similarity=0.104  Sum_probs=129.0

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCccccc----CCCC-CccccCcccccCcchHHhhcc-------CCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI----FPGK-KTRFFPGVMIAEEPQWRDCIQ-------GST  118 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~-~~~~~~~~d~~~~~~~~~~~~-------~~d  118 (363)
                      |+++||||+|+||+++++.|+++|++|++++|+.+..+..    .... .......+|+.+.+++.++++       ++|
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD   80 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            4799999999999999999999999999999987543222    1111 111124578888877665543       579


Q ss_pred             EEEEccCCCCC---CCCChhhHHHHHHHHHHHHHHHHHHHHhC--C-CCCCCeEEEeccceecCCcccccccCCCcchhh
Q 017977          119 AVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--P-EGVRPSVLELVKPKYLMRAAHQEMITWLSDYCA  192 (363)
Q Consensus       119 ~Vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~-~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~  192 (363)
                      +|||++|....   ...+.+..+..+++|+.++.++++++...  . ....++|++||..+..+       .+....|..
T Consensus        81 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~-------~~~~~~Y~~  153 (272)
T PRK07832         81 VVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVA-------LPWHAAYSA  153 (272)
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCC-------CCCCcchHH
Confidence            99999986422   22345566788999999999999997532  0 22357999998743222       222334555


Q ss_pred             hhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCccc-----chHHHHHHHhCCCCCCCCCccccccHH
Q 017977          193 KVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALA-----KMIPLFMMFAGGPLGSGQQWFSWIHLD  267 (363)
Q Consensus       193 ~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~i~v~  267 (363)
                      +|.+...+.+      . ....+. ..++++++++||.+.++......     .-..........      .....+..+
T Consensus       154 sK~a~~~~~~------~-l~~e~~-~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~  219 (272)
T PRK07832        154 SKFGLRGLSE------V-LRFDLA-RHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVDR------FRGHAVTPE  219 (272)
T ss_pred             HHHHHHHHHH------H-HHHHhh-hcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHHh------cccCCCCHH
Confidence            5432222211      1 111111 24899999999999877432110     000000000000      011257899


Q ss_pred             HHHHHHHHHhcC
Q 017977          268 DIVNLIYEALSN  279 (363)
Q Consensus       268 D~a~a~~~~~~~  279 (363)
                      |+|++++.++.+
T Consensus       220 ~vA~~~~~~~~~  231 (272)
T PRK07832        220 KAAEKILAGVEK  231 (272)
T ss_pred             HHHHHHHHHHhc
Confidence            999999999964

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.65  E-value=1.1e-14  Score=125.73  Aligned_cols=202  Identities=11%  Similarity=0.032  Sum_probs=125.2

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCC-----CCccccCcccccCc--chHHhh-------c
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KKTRFFPGVMIAEE--PQWRDC-------I  114 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~d~~~~--~~~~~~-------~  114 (363)
                      .+++|+||||+|+||+++++.|+++|++|++++|+....+.....     ........+|+.+.  +++.++       +
T Consensus         5 ~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~   84 (239)
T PRK08703          5 SDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEAT   84 (239)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHHh
Confidence            346899999999999999999999999999999988654322110     01112344677642  333332       2


Q ss_pred             -cCCCEEEEccCCCCC----CCCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCC
Q 017977          115 -QGSTAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWL  187 (363)
Q Consensus       115 -~~~d~Vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~  187 (363)
                       ..+|+|||+||....    .....+.....+++|+.++.++++++.+.  ..+..++|++||..+..+       .+..
T Consensus        85 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~-------~~~~  157 (239)
T PRK08703         85 QGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETP-------KAYW  157 (239)
T ss_pred             CCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccccC-------CCCc
Confidence             467999999996322    12334556678999999988888887653  134567999988633111       1222


Q ss_pred             cchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHH
Q 017977          188 SDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLD  267 (363)
Q Consensus       188 ~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  267 (363)
                      ..|..+|.+...|.+      .+..+ +....++++++++||.|.++.....   .      .+      .....+...+
T Consensus       158 ~~Y~~sKaa~~~~~~------~la~e-~~~~~~i~v~~v~pG~v~t~~~~~~---~------~~------~~~~~~~~~~  215 (239)
T PRK08703        158 GGFGASKAALNYLCK------VAADE-WERFGNLRANVLVPGPINSPQRIKS---H------PG------EAKSERKSYG  215 (239)
T ss_pred             cchHHhHHHHHHHHH------HHHHH-hccCCCeEEEEEecCcccCcccccc---C------CC------CCccccCCHH
Confidence            345555433222211      11111 1111269999999999998853211   0      00      1111356899


Q ss_pred             HHHHHHHHHhcC
Q 017977          268 DIVNLIYEALSN  279 (363)
Q Consensus       268 D~a~a~~~~~~~  279 (363)
                      |++.++..++..
T Consensus       216 ~~~~~~~~~~~~  227 (239)
T PRK08703        216 DVLPAFVWWASA  227 (239)
T ss_pred             HHHHHHHHHhCc
Confidence            999999999974

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.65  E-value=8.3e-15  Score=126.47  Aligned_cols=215  Identities=16%  Similarity=0.101  Sum_probs=133.0

Q ss_pred             EEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcc-ccc----CCCCCccccCcccccCcchHHhhcc-------CCCEE
Q 017977           53 VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-ELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAV  120 (363)
Q Consensus        53 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~V  120 (363)
                      |+||||+|+||.++++.|+++|++|++++|+..+. ...    ...........+|+.|.+++.++++       .+|++
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l   80 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV   80 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            68999999999999999999999999998764321 111    1111112245689998888776554       47999


Q ss_pred             EEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHH-hC--CCCCCCeEEEeccceecCCcccccccCCCcchhhhh
Q 017977          121 VNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLIN-ES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKV  194 (363)
Q Consensus       121 i~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~-~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~  194 (363)
                      ||++|.....   ....+..+..+++|+.++.++++++. ..  ..+..++|++||.++.++       .+....|..+|
T Consensus        81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~-------~~~~~~Y~~sK  153 (239)
T TIGR01831        81 VLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMG-------NRGQVNYSAAK  153 (239)
T ss_pred             EECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccC-------CCCCcchHHHH
Confidence            9999864332   23456678899999999999988763 10  024457999999866555       22233455443


Q ss_pred             hhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHHH
Q 017977          195 YCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY  274 (363)
Q Consensus       195 ~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~  274 (363)
                      .....+.+       .....+. ..|++++.++|+.+.++..........  ......+++      .+...+|+++++.
T Consensus       154 ~a~~~~~~-------~la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~--~~~~~~~~~------~~~~~~~va~~~~  217 (239)
T TIGR01831       154 AGLIGATK-------ALAVELA-KRKITVNCIAPGLIDTEMLAEVEHDLD--EALKTVPMN------RMGQPAEVASLAG  217 (239)
T ss_pred             HHHHHHHH-------HHHHHHh-HhCeEEEEEEEccCccccchhhhHHHH--HHHhcCCCC------CCCCHHHHHHHHH
Confidence            22211111       1111111 138999999999998764322111111  111122221      2567899999999


Q ss_pred             HHhcCCC--CCc-eEEeeC
Q 017977          275 EALSNPS--YRG-VINGTA  290 (363)
Q Consensus       275 ~~~~~~~--~~g-~~~i~~  290 (363)
                      .++....  ..| ...+.+
T Consensus       218 ~l~~~~~~~~~g~~~~~~g  236 (239)
T TIGR01831       218 FLMSDGASYVTRQVISVNG  236 (239)
T ss_pred             HHcCchhcCccCCEEEecC
Confidence            9987543  344 444443

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.65  E-value=1.1e-14  Score=127.20  Aligned_cols=222  Identities=12%  Similarity=0.014  Sum_probs=135.5

Q ss_pred             CccEEEEecCc--chHHHHHHHHHHhCCCEEEEEeCCCCcc---cccCCCCCccccCcccccCcchHHhhcc-------C
Q 017977           49 SQMTVSVTGAT--GFIGRRLVQRLQADNHQVRVLTRSRSKA---ELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (363)
Q Consensus        49 ~~~~vlVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~---~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (363)
                      ..++++||||+  +.||+++++.|+++|++|++++|+....   ..+...........+|+.|.+++.++++       .
T Consensus         9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   88 (258)
T PRK07533          9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWGR   88 (258)
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcCC
Confidence            44789999998  5999999999999999999999975421   1111111112245689999888876653       5


Q ss_pred             CCEEEEccCCCCC-------CCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcc
Q 017977          117 STAVVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSD  189 (363)
Q Consensus       117 ~d~Vi~~a~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~  189 (363)
                      +|++|||||....       ...+.+..+..+++|+.++..+.+++...-....++|++||.++..+       .+....
T Consensus        89 ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~~-------~~~~~~  161 (258)
T PRK07533         89 LDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEKV-------VENYNL  161 (258)
T ss_pred             CCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccccccC-------Cccchh
Confidence            7999999986421       12345567889999999999999987764112246889888743111       122234


Q ss_pred             hhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHH-HHhCCCCCCCCCccccccHHH
Q 017977          190 YCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFM-MFAGGPLGSGQQWFSWIHLDD  268 (363)
Q Consensus       190 ~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~D  268 (363)
                      |..+|.+...+.++       ....+. ..|+.+..+.||.+-.+............. .....++      ..+...+|
T Consensus       162 Y~asKaal~~l~~~-------la~el~-~~gI~Vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------~r~~~p~d  227 (258)
T PRK07533        162 MGPVKAALESSVRY-------LAAELG-PKGIRVHAISPGPLKTRAASGIDDFDALLEDAAERAPL------RRLVDIDD  227 (258)
T ss_pred             hHHHHHHHHHHHHH-------HHHHhh-hcCcEEEEEecCCcCChhhhccCCcHHHHHHHHhcCCc------CCCCCHHH
Confidence            55554333222221       111111 238999999999987653211111111111 1111121      13678999


Q ss_pred             HHHHHHHHhcCCC--CCc-eEEeeCC
Q 017977          269 IVNLIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       269 ~a~a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      +|++++.++....  ..| .+.+.++
T Consensus       228 va~~~~~L~s~~~~~itG~~i~vdgg  253 (258)
T PRK07533        228 VGAVAAFLASDAARRLTGNTLYIDGG  253 (258)
T ss_pred             HHHHHHHHhChhhccccCcEEeeCCc
Confidence            9999999987533  445 5544443

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.65  E-value=1.2e-14  Score=126.93  Aligned_cols=222  Identities=14%  Similarity=0.041  Sum_probs=133.5

Q ss_pred             CccEEEEecCcc--hHHHHHHHHHHhCCCEEEEEeCCCC---cccccCCCCCccccCcccccCcchHHhhcc-------C
Q 017977           49 SQMTVSVTGATG--FIGRRLVQRLQADNHQVRVLTRSRS---KAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (363)
Q Consensus        49 ~~~~vlVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~---~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (363)
                      .+++++||||++  .||+++++.|+++|++|++.+|+..   ..+.+...........+|+.|.++++++++       .
T Consensus         5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   84 (262)
T PRK07984          5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPK   84 (262)
T ss_pred             CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCC
Confidence            346899999985  9999999999999999999888731   112221111112245689999988876653       4


Q ss_pred             CCEEEEccCCCCCC--------CCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCc
Q 017977          117 STAVVNLAGTPIGT--------RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLS  188 (363)
Q Consensus       117 ~d~Vi~~a~~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~  188 (363)
                      +|++||+||.....        ..+.+..+..+++|+.+...+.+++........++|++||.++..+       .+...
T Consensus        85 iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~~-------~~~~~  157 (262)
T PRK07984         85 FDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERA-------IPNYN  157 (262)
T ss_pred             CCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCCC-------CCCcc
Confidence            79999999863221        1234455678899999988888887653112256889988743111       12223


Q ss_pred             chhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHH-HhCCCCCCCCCccccccHH
Q 017977          189 DYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMM-FAGGPLGSGQQWFSWIHLD  267 (363)
Q Consensus       189 ~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~  267 (363)
                      .|..+|.+...+.++       ....+. ..|+++..+.||.+..+.............. ....+.      ..+..++
T Consensus       158 ~Y~asKaal~~l~~~-------la~el~-~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------~r~~~pe  223 (262)
T PRK07984        158 VMGLAKASLEANVRY-------MANAMG-PEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPI------RRTVTIE  223 (262)
T ss_pred             hhHHHHHHHHHHHHH-------HHHHhc-ccCcEEeeeecCcccchHHhcCCchHHHHHHHHHcCCC------cCCCCHH
Confidence            455554333322221       111111 2389999999999876421110011111111 111121      1367899


Q ss_pred             HHHHHHHHHhcCCC--CCc-eEEeeCC
Q 017977          268 DIVNLIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       268 D~a~a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      |+++++..++....  ..| .+.+.++
T Consensus       224 dva~~~~~L~s~~~~~itG~~i~vdgg  250 (262)
T PRK07984        224 DVGNSAAFLCSDLSAGISGEVVHVDGG  250 (262)
T ss_pred             HHHHHHHHHcCcccccccCcEEEECCC
Confidence            99999999987543  445 5555544

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.65  E-value=1.3e-14  Score=126.77  Aligned_cols=221  Identities=10%  Similarity=-0.009  Sum_probs=136.6

Q ss_pred             ccEEEEecCcc--hHHHHHHHHHHhCCCEEEEEeCCCCc---ccccCCCCCccccCcccccCcchHHhhcc-------CC
Q 017977           50 QMTVSVTGATG--FIGRRLVQRLQADNHQVRVLTRSRSK---AELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (363)
Q Consensus        50 ~~~vlVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~---~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (363)
                      ++.++||||++  .||+++++.|+++|++|++.+|+...   ...+...........+|+.|.+++.++++       .+
T Consensus         8 ~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   87 (260)
T PRK06603          8 GKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWGSF   87 (260)
T ss_pred             CcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcCCc
Confidence            46899999997  89999999999999999998887421   11221111111234689999988876663       58


Q ss_pred             CEEEEccCCCCC-------CCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcch
Q 017977          118 TAVVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDY  190 (363)
Q Consensus       118 d~Vi~~a~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~  190 (363)
                      |++||+|+....       ...+.+..+..+++|+.+...+++++.+......++|++||.++..+       .+....|
T Consensus        88 DilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~-------~~~~~~Y  160 (260)
T PRK06603         88 DFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEKV-------IPNYNVM  160 (260)
T ss_pred             cEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCccccC-------CCcccch
Confidence            999999986321       12345667889999999999998887654122257999998743211       2223456


Q ss_pred             hhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHH-HHhCCCCCCCCCccccccHHHH
Q 017977          191 CAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFM-MFAGGPLGSGQQWFSWIHLDDI  269 (363)
Q Consensus       191 ~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~D~  269 (363)
                      ..+|.+...+.++  +..+     +. ..|+.+..+.||.+-.+............. .....|+      ..+...+|+
T Consensus       161 ~asKaal~~l~~~--la~e-----l~-~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------~r~~~pedv  226 (260)
T PRK06603        161 GVAKAALEASVKY--LAND-----MG-ENNIRVNAISAGPIKTLASSAIGDFSTMLKSHAATAPL------KRNTTQEDV  226 (260)
T ss_pred             hhHHHHHHHHHHH--HHHH-----hh-hcCeEEEEEecCcCcchhhhcCCCcHHHHHHHHhcCCc------CCCCCHHHH
Confidence            6665444333321  1111     11 248999999999987652111001001111 1111122      125779999


Q ss_pred             HHHHHHHhcCCC--CCc-eEEeeCC
Q 017977          270 VNLIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       270 a~a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      |+++..++....  ..| .+.+.++
T Consensus       227 a~~~~~L~s~~~~~itG~~i~vdgG  251 (260)
T PRK06603        227 GGAAVYLFSELSKGVTGEIHYVDCG  251 (260)
T ss_pred             HHHHHHHhCcccccCcceEEEeCCc
Confidence            999999997543  345 5555554

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.65  E-value=9.4e-15  Score=128.41  Aligned_cols=221  Identities=10%  Similarity=0.023  Sum_probs=136.2

Q ss_pred             ccEEEEecCc--chHHHHHHHHHHhCCCEEEEEeCCCC---cccccCCCCCccccCcccccCcchHHhhcc-------CC
Q 017977           50 QMTVSVTGAT--GFIGRRLVQRLQADNHQVRVLTRSRS---KAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (363)
Q Consensus        50 ~~~vlVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~---~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (363)
                      .++++||||+  +.||+++++.|+++|++|+++.|+..   ..+.+...........+|+.|.++++++++       .+
T Consensus        10 ~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   89 (272)
T PRK08159         10 GKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKWGKL   89 (272)
T ss_pred             CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence            3689999997  89999999999999999998887632   112221111111235689999888876653       57


Q ss_pred             CEEEEccCCCCC-------CCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcch
Q 017977          118 TAVVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDY  190 (363)
Q Consensus       118 d~Vi~~a~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~  190 (363)
                      |++||+||....       ...+.+..+..+++|+.++..+++++.+.-....++|++||.++..       ..+....|
T Consensus        90 D~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~-------~~p~~~~Y  162 (272)
T PRK08159         90 DFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEK-------VMPHYNVM  162 (272)
T ss_pred             cEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEecccccc-------CCCcchhh
Confidence            999999996421       1234556788999999999999998876412235789998873311       12223345


Q ss_pred             hhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHh-CCCCCCCCCccccccHHHH
Q 017977          191 CAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFA-GGPLGSGQQWFSWIHLDDI  269 (363)
Q Consensus       191 ~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~D~  269 (363)
                      ..+|.+...+.++       ....+. ..|+++..+.||.+..+................ ..|+      ..+...+|+
T Consensus       163 ~asKaal~~l~~~-------la~el~-~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------~r~~~peev  228 (272)
T PRK08159        163 GVAKAALEASVKY-------LAVDLG-PKNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPL------RRTVTIEEV  228 (272)
T ss_pred             hhHHHHHHHHHHH-------HHHHhc-ccCeEEEEeecCCcCCHHHhcCCcchHHHHHHHhCCcc------cccCCHHHH
Confidence            5555443333321       111111 238999999999987642111111000001111 1121      125789999


Q ss_pred             HHHHHHHhcCCC--CCc-eEEeeCC
Q 017977          270 VNLIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       270 a~a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      |++++.++....  ..| .+.+.++
T Consensus       229 A~~~~~L~s~~~~~itG~~i~vdgG  253 (272)
T PRK08159        229 GDSALYLLSDLSRGVTGEVHHVDSG  253 (272)
T ss_pred             HHHHHHHhCccccCccceEEEECCC
Confidence            999999997543  455 5555555

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.64  E-value=4.9e-15  Score=129.81  Aligned_cols=222  Identities=19%  Similarity=0.103  Sum_probs=134.8

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCC-CccccCcccccCcchHHhhcc-------CCCEE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK-KTRFFPGVMIAEEPQWRDCIQ-------GSTAV  120 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~-------~~d~V  120 (363)
                      .+++++||||+|+||+++++.|+++|++|++++|+....+.+.... .......+|+.|.+++..+++       .+|++
T Consensus         5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   84 (263)
T PRK06200          5 HGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCF   84 (263)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            3468999999999999999999999999999999876544332211 112244579988887766653       58999


Q ss_pred             EEccCCCCC-C---CCChh----hHHHHHHHHHHHHHHHHHHHHhC-CCCCCCeEEEeccceecCCcccccccCCCcchh
Q 017977          121 VNLAGTPIG-T---RWSSE----IKKEIKESRIRVTSKVVDLINES-PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYC  191 (363)
Q Consensus       121 i~~a~~~~~-~---~~~~~----~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~  191 (363)
                      ||+||.... .   ....+    ..+..+++|+.++..+++++.+. .....++|++||..+.++       .+....|.
T Consensus        85 i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-------~~~~~~Y~  157 (263)
T PRK06200         85 VGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYP-------GGGGPLYT  157 (263)
T ss_pred             EECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCC-------CCCCchhH
Confidence            999996321 1   11222    24567889999998888888753 122346999998843222       12223455


Q ss_pred             hhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCc--c---cch---HH-HHHHHhCCCCCCCCCccc
Q 017977          192 AKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA--L---AKM---IP-LFMMFAGGPLGSGQQWFS  262 (363)
Q Consensus       192 ~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~--~---~~~---~~-~~~~~~~~~~~~~~~~~~  262 (363)
                      .+|.+...+.+         ........++.+..+.||.+..+....  .   ...   .+ .......     ......
T Consensus       158 ~sK~a~~~~~~---------~la~el~~~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~p~~r  223 (263)
T PRK06200        158 ASKHAVVGLVR---------QLAYELAPKIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAA-----ITPLQF  223 (263)
T ss_pred             HHHHHHHHHHH---------HHHHHHhcCcEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhc-----CCCCCC
Confidence            55433222221         111111125999999999997663211  0   000   01 0111111     011123


Q ss_pred             cccHHHHHHHHHHHhcCC-C--CCc-eEEeeCC
Q 017977          263 WIHLDDIVNLIYEALSNP-S--YRG-VINGTAP  291 (363)
Q Consensus       263 ~i~v~D~a~a~~~~~~~~-~--~~g-~~~i~~~  291 (363)
                      +...+|+|+++..++... .  ..| .+.+.+|
T Consensus       224 ~~~~~eva~~~~fl~s~~~~~~itG~~i~vdgG  256 (263)
T PRK06200        224 APQPEDHTGPYVLLASRRNSRALTGVVINADGG  256 (263)
T ss_pred             CCCHHHHhhhhhheecccccCcccceEEEEcCc
Confidence            678999999999998755 3  344 6666554

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.64  E-value=1.1e-14  Score=125.85  Aligned_cols=219  Identities=16%  Similarity=0.100  Sum_probs=131.4

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCC-CCcccccC----CCCCccccCcccccCcchHHhhcc-------CCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRS-RSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GST  118 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~~d  118 (363)
                      +++|||||+|+||+++++.|+++|++|+++.|+ ........    ..........+|+.|.+++.++++       .+|
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID   80 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence            479999999999999999999999999999883 32221110    011112244678988887766553       589


Q ss_pred             EEEEccCCCCC---CCCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhh
Q 017977          119 AVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAK  193 (363)
Q Consensus       119 ~Vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~  193 (363)
                      +|||++|....   .....+..+..++.|+.++..+++++...  ..+.+++|++||..+..+       .+....|...
T Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~-------~~~~~~y~~s  153 (242)
T TIGR01829        81 VLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKG-------QFGQTNYSAA  153 (242)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCC-------CCCcchhHHH
Confidence            99999986432   12244556778899999977755554321  145678999998744332       1222344444


Q ss_pred             hhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc-cchHHHHHHHhCCCCCCCCCccccccHHHHHHH
Q 017977          194 VYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL  272 (363)
Q Consensus       194 ~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a  272 (363)
                      |.....|.      .....+ +. ..+++++.++|+.+.++..... ......+  ....++.      .+...+|++++
T Consensus       154 k~a~~~~~------~~la~~-~~-~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~--~~~~~~~------~~~~~~~~a~~  217 (242)
T TIGR01829       154 KAGMIGFT------KALAQE-GA-TKGVTVNTISPGYIATDMVMAMREDVLNSI--VAQIPVG------RLGRPEEIAAA  217 (242)
T ss_pred             HHHHHHHH------HHHHHH-hh-hhCeEEEEEeeCCCcCccccccchHHHHHH--HhcCCCC------CCcCHHHHHHH
Confidence            32111111      111111 11 2389999999999987753221 1111111  1122221      25668999999


Q ss_pred             HHHHhcCCC--CCc-eEEeeCCC
Q 017977          273 IYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       273 ~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      +..++..+.  ..| .+.+.++.
T Consensus       218 ~~~l~~~~~~~~~G~~~~~~gg~  240 (242)
T TIGR01829       218 VAFLASEEAGYITGATLSINGGL  240 (242)
T ss_pred             HHHHcCchhcCccCCEEEecCCc
Confidence            988776543  333 77777653

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.64  E-value=1.3e-14  Score=126.78  Aligned_cols=221  Identities=10%  Similarity=0.024  Sum_probs=135.1

Q ss_pred             ccEEEEecC--cchHHHHHHHHHHhCCCEEEEEeCCC---CcccccCCCCCccccCcccccCcchHHhhcc-------CC
Q 017977           50 QMTVSVTGA--TGFIGRRLVQRLQADNHQVRVLTRSR---SKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (363)
Q Consensus        50 ~~~vlVtGa--tG~iG~~l~~~L~~~g~~V~~~~r~~---~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (363)
                      .++++||||  ++.||+++++.|+++|++|++++|..   +....+...........+|+.|.+++.++++       .+
T Consensus         6 ~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   85 (260)
T PRK06997          6 GKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWDGL   85 (260)
T ss_pred             CcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhCCC
Confidence            468999996  67999999999999999999886542   2222211111111245689999988877664       58


Q ss_pred             CEEEEccCCCCCC--------CCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcc
Q 017977          118 TAVVNLAGTPIGT--------RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSD  189 (363)
Q Consensus       118 d~Vi~~a~~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~  189 (363)
                      |++||+||.....        ..+.+..+..+++|+.++..+.+++.+.-....++|++||.++..+       .+....
T Consensus        86 D~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~~-------~~~~~~  158 (260)
T PRK06997         86 DGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERV-------VPNYNT  158 (260)
T ss_pred             cEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccccccC-------CCCcch
Confidence            9999999974221        1234566778999999999998888775222356999998743211       222334


Q ss_pred             hhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHH-HhCCCCCCCCCccccccHHH
Q 017977          190 YCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMM-FAGGPLGSGQQWFSWIHLDD  268 (363)
Q Consensus       190 ~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~D  268 (363)
                      |..+|.+...+.++       ....+. ..|++++.+.||.+-.+........-..... ....|+      ..+..++|
T Consensus       159 Y~asKaal~~l~~~-------la~el~-~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------~r~~~ped  224 (260)
T PRK06997        159 MGLAKASLEASVRY-------LAVSLG-PKGIRANGISAGPIKTLAASGIKDFGKILDFVESNAPL------RRNVTIEE  224 (260)
T ss_pred             HHHHHHHHHHHHHH-------HHHHhc-ccCeEEEEEeeCccccchhccccchhhHHHHHHhcCcc------cccCCHHH
Confidence            66655443333221       111111 2389999999998876421111000000111 111121      12678999


Q ss_pred             HHHHHHHHhcCCC--CCc-eEEeeCC
Q 017977          269 IVNLIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       269 ~a~a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      +++++..+++...  ..| ++.+.++
T Consensus       225 va~~~~~l~s~~~~~itG~~i~vdgg  250 (260)
T PRK06997        225 VGNVAAFLLSDLASGVTGEITHVDSG  250 (260)
T ss_pred             HHHHHHHHhCccccCcceeEEEEcCC
Confidence            9999999987543  444 5555544

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.64  E-value=5.5e-15  Score=129.39  Aligned_cols=220  Identities=16%  Similarity=0.101  Sum_probs=134.8

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCC-CccccCcccccCcchHHhhcc-------CCCEEE
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK-KTRFFPGVMIAEEPQWRDCIQ-------GSTAVV  121 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~-------~~d~Vi  121 (363)
                      +++++||||+|+||+++++.|+++|++|++++|+....+.+.... .......+|+.+.+++.++++       .+|++|
T Consensus         5 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li   84 (262)
T TIGR03325         5 GEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCLI   84 (262)
T ss_pred             CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCEEE
Confidence            468999999999999999999999999999999876544433221 112234578888877766553       579999


Q ss_pred             EccCCCCC-C---CCCh----hhHHHHHHHHHHHHHHHHHHHHhC-CCCCCCeEEEeccceecCCcccccccCCCcchhh
Q 017977          122 NLAGTPIG-T---RWSS----EIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCA  192 (363)
Q Consensus       122 ~~a~~~~~-~---~~~~----~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~  192 (363)
                      |+||.... .   ....    +..+..+++|+.++..+++++.+. .....++|++||..+.++       .+....|..
T Consensus        85 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~~-------~~~~~~Y~~  157 (262)
T TIGR03325        85 PNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYP-------NGGGPLYTA  157 (262)
T ss_pred             ECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceecC-------CCCCchhHH
Confidence            99986321 1   1111    245678999999999999998763 112256888888744332       122335555


Q ss_pred             hhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc-----cch---HHHHHHHhC-CCCCCCCCcccc
Q 017977          193 KVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL-----AKM---IPLFMMFAG-GPLGSGQQWFSW  263 (363)
Q Consensus       193 ~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~-----~~~---~~~~~~~~~-~~~~~~~~~~~~  263 (363)
                      +|.+...+.+         .........+++..+.||.+..+.....     ...   .+....... .|+      ..+
T Consensus       158 sKaa~~~l~~---------~la~e~~~~irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~------~r~  222 (262)
T TIGR03325       158 AKHAVVGLVK---------ELAFELAPYVRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLPI------GRM  222 (262)
T ss_pred             HHHHHHHHHH---------HHHHhhccCeEEEEEecCCCcCCCccccccccccccccccchhhhhhhcCCC------CCC
Confidence            5433322221         1111111249999999999976632110     000   000011111 111      236


Q ss_pred             ccHHHHHHHHHHHhcCCC---CCc-eEEeeCC
Q 017977          264 IHLDDIVNLIYEALSNPS---YRG-VINGTAP  291 (363)
Q Consensus       264 i~v~D~a~a~~~~~~~~~---~~g-~~~i~~~  291 (363)
                      ...+|+|+++..++....   ..| ++.+.++
T Consensus       223 ~~p~eva~~~~~l~s~~~~~~~tG~~i~vdgg  254 (262)
T TIGR03325       223 PDAEEYTGAYVFFATRGDTVPATGAVLNYDGG  254 (262)
T ss_pred             CChHHhhhheeeeecCCCcccccceEEEecCC
Confidence            779999999998887532   345 5555554

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.64  E-value=1.5e-14  Score=126.73  Aligned_cols=216  Identities=15%  Similarity=0.031  Sum_probs=134.0

Q ss_pred             ccEEEEecCcc-hHHHHHHHHHHhCCCEEEEEeCCCCcccccCC-----CC-CccccCcccccCcchHHhhcc-------
Q 017977           50 QMTVSVTGATG-FIGRRLVQRLQADNHQVRVLTRSRSKAELIFP-----GK-KTRFFPGVMIAEEPQWRDCIQ-------  115 (363)
Q Consensus        50 ~~~vlVtGatG-~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----~~-~~~~~~~~d~~~~~~~~~~~~-------  115 (363)
                      .++++||||+| .||+++++.|+++|++|++++|+..+.+....     .. .......+|+.+.+++.++++       
T Consensus        17 ~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   96 (262)
T PRK07831         17 GKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVERLG   96 (262)
T ss_pred             CCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            46899999997 69999999999999999999998755332211     01 112244579988887776654       


Q ss_pred             CCCEEEEccCCCCC---CCCChhhHHHHHHHHHHHHHHHHHHHHhC--CCC-CCCeEEEeccceecCCcccccccCCCcc
Q 017977          116 GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLELVKPKYLMRAAHQEMITWLSD  189 (363)
Q Consensus       116 ~~d~Vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~-~~~~v~~SS~~~~yg~~~~~e~~~~~~~  189 (363)
                      .+|+|||+||....   ...+.+.....+++|+.++..+++++.+.  ..+ ...+|++||..+..+       .+....
T Consensus        97 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~-------~~~~~~  169 (262)
T PRK07831         97 RLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRA-------QHGQAH  169 (262)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCC-------CCCCcc
Confidence            57999999996422   12234556778899999998888887653  122 356888877633211       122334


Q ss_pred             hhhhhhhcccchhhHHHHHHHHHHHh-c-cCCCceEEEEeeceEEeCCCCcc--cchHHHHHHHhCCCCCCCCCcccccc
Q 017977          190 YCAKVYCLVSFNRGVLVCREWEGTAL-K-VNKDVRLALIRIGIVLGKDGGAL--AKMIPLFMMFAGGPLGSGQQWFSWIH  265 (363)
Q Consensus       190 ~~~~~~~~~~y~~~k~~~~~~~~~~~-~-~~~~~~~~ilRp~~v~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~  265 (363)
                      |..+|.+          ...+..... . ..+|+++..++|+.+..+.....  ......  .....++      ..+..
T Consensus       170 Y~~sKaa----------l~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~~~~~~~~--~~~~~~~------~r~~~  231 (262)
T PRK07831        170 YAAAKAG----------VMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVTSAELLDE--LAAREAF------GRAAE  231 (262)
T ss_pred             hHHHHHH----------HHHHHHHHHHHhCccCeEEEEEeeCCccCcccccccCHHHHHH--HHhcCCC------CCCcC
Confidence            5554432          222222111 1 12489999999999988743211  111111  1112222      13677


Q ss_pred             HHHHHHHHHHHhcCCC--CCc-eEEeeC
Q 017977          266 LDDIVNLIYEALSNPS--YRG-VINGTA  290 (363)
Q Consensus       266 v~D~a~a~~~~~~~~~--~~g-~~~i~~  290 (363)
                      .+|+|+++..++....  ..| .+.+.+
T Consensus       232 p~~va~~~~~l~s~~~~~itG~~i~v~~  259 (262)
T PRK07831        232 PWEVANVIAFLASDYSSYLTGEVVSVSS  259 (262)
T ss_pred             HHHHHHHHHHHcCchhcCcCCceEEeCC
Confidence            8999999999887643  344 454444

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.64  E-value=4.2e-14  Score=123.75  Aligned_cols=220  Identities=14%  Similarity=0.027  Sum_probs=132.3

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcc-c----ccCCCCCccccCcccccCcchHHhhcc-------C
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-E----LIFPGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~----~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (363)
                      ..++++||||+|+||+++++.|+++|++|+++.|+..+. .    .+...........+|+.|.+++.++++       .
T Consensus         6 ~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~   85 (261)
T PRK08936          6 EGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFGT   85 (261)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            457999999999999999999999999999988865331 1    111111112244679998887776654       5


Q ss_pred             CCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHH----HHhCCCC-CCCeEEEeccceecCCcccccccCCCc
Q 017977          117 STAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDL----INESPEG-VRPSVLELVKPKYLMRAAHQEMITWLS  188 (363)
Q Consensus       117 ~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~----~~~~~~~-~~~~v~~SS~~~~yg~~~~~e~~~~~~  188 (363)
                      +|++||+|+.....   ....+..+..+++|+.++..++++    +.+  .+ ..++|++||..+..+       .+...
T Consensus        86 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~--~~~~g~iv~~sS~~~~~~-------~~~~~  156 (261)
T PRK08936         86 LDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVE--HDIKGNIINMSSVHEQIP-------WPLFV  156 (261)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh--cCCCcEEEEEccccccCC-------CCCCc
Confidence            79999999974332   223455677899998887655544    444  33 357899998732111       22334


Q ss_pred             chhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCc-ccchHHHHHHHhCCCCCCCCCccccccHH
Q 017977          189 DYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA-LAKMIPLFMMFAGGPLGSGQQWFSWIHLD  267 (363)
Q Consensus       189 ~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  267 (363)
                      .|..+|.+...|.+       .....+. ..|++++.++|+.+.++.... ..............+.      ..+...+
T Consensus       157 ~Y~~sKaa~~~~~~-------~la~e~~-~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~  222 (261)
T PRK08936        157 HYAASKGGVKLMTE-------TLAMEYA-PKGIRVNNIGPGAINTPINAEKFADPKQRADVESMIPM------GYIGKPE  222 (261)
T ss_pred             ccHHHHHHHHHHHH-------HHHHHHh-hcCeEEEEEEECcCCCCccccccCCHHHHHHHHhcCCC------CCCcCHH
Confidence            55555433222221       1111111 238999999999998774321 1110000011111121      2367799


Q ss_pred             HHHHHHHHHhcCCC--CCc-eEEeeCC
Q 017977          268 DIVNLIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       268 D~a~a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      |+++++..++....  ..| .+.+.++
T Consensus       223 ~va~~~~~l~s~~~~~~~G~~i~~d~g  249 (261)
T PRK08936        223 EIAAVAAWLASSEASYVTGITLFADGG  249 (261)
T ss_pred             HHHHHHHHHcCcccCCccCcEEEECCC
Confidence            99999999887543  455 4555444

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.63  E-value=3.2e-15  Score=130.64  Aligned_cols=221  Identities=15%  Similarity=0.083  Sum_probs=130.4

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCC---CCCccccCcccccCcchHHhhcc-------CCCEE
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP---GKKTRFFPGVMIAEEPQWRDCIQ-------GSTAV  120 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~-------~~d~V  120 (363)
                      |+++||||+|.||++++++|+++|++|++++|+.........   .........+|+.|.+++.++++       ++|+|
T Consensus         1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~l   80 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDAL   80 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            589999999999999999999999999999998755332211   01112245689999888876653       68999


Q ss_pred             EEccCCCCC-----CCCChhhHHHHHHHHHHHHHHHHHHHHhC---CCCCCCeEEEeccceecCCcccccccCCCcchhh
Q 017977          121 VNLAGTPIG-----TRWSSEIKKEIKESRIRVTSKVVDLINES---PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCA  192 (363)
Q Consensus       121 i~~a~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~  192 (363)
                      ||+||....     .....+.....+++|+.+...+..++...   ..+..++|++||..+ ..      ..+....|..
T Consensus        81 i~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~-~~------~~~~~~~y~~  153 (259)
T PRK08340         81 VWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSV-KE------PMPPLVLADV  153 (259)
T ss_pred             EECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCccc-CC------CCCCchHHHH
Confidence            999996421     11122334455677877755544433211   034457999998843 11      1223345555


Q ss_pred             hhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCc-ccch-------HHH-H--HHHhCCCCCCCCCcc
Q 017977          193 KVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA-LAKM-------IPL-F--MMFAGGPLGSGQQWF  261 (363)
Q Consensus       193 ~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~-~~~~-------~~~-~--~~~~~~~~~~~~~~~  261 (363)
                      +|.+...+.++       ....+. ..|+.+..+.||.+-.+.... ....       ... .  ......|      ..
T Consensus       154 sKaa~~~~~~~-------la~e~~-~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p------~~  219 (259)
T PRK08340        154 TRAGLVQLAKG-------VSRTYG-GKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERTP------LK  219 (259)
T ss_pred             HHHHHHHHHHH-------HHHHhC-CCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhccCC------cc
Confidence            54443333221       111111 238999999999887663211 0000       000 0  0011111      12


Q ss_pred             ccccHHHHHHHHHHHhcCCC--CCc-eEEeeCCC
Q 017977          262 SWIHLDDIVNLIYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       262 ~~i~v~D~a~a~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      .+...+|+|+++..++....  ..| ++.+.++.
T Consensus       220 r~~~p~dva~~~~fL~s~~~~~itG~~i~vdgg~  253 (259)
T PRK08340        220 RTGRWEELGSLIAFLLSENAEYMLGSTIVFDGAM  253 (259)
T ss_pred             CCCCHHHHHHHHHHHcCcccccccCceEeecCCc
Confidence            36789999999999987543  455 55555553

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.63  E-value=3.6e-15  Score=127.63  Aligned_cols=171  Identities=16%  Similarity=0.149  Sum_probs=116.7

Q ss_pred             CCCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCccccc----CC-CCC-ccccCcccccCcchHHhhc------
Q 017977           47 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI----FP-GKK-TRFFPGVMIAEEPQWRDCI------  114 (363)
Q Consensus        47 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~-~~~-~~~~~~~d~~~~~~~~~~~------  114 (363)
                      ....+.|+|||||..||.+++.+|.++|.+++.+.|...+.+..    .. ... ......+|+.|.+++.+++      
T Consensus         9 ~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~   88 (282)
T KOG1205|consen    9 RLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRH   88 (282)
T ss_pred             HhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHh
Confidence            34457999999999999999999999999988888887665443    11 111 1334568999999888665      


Q ss_pred             -cCCCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCc
Q 017977          115 -QGSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLS  188 (363)
Q Consensus       115 -~~~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~  188 (363)
                       .++|++|||||.....   ..+......++++|+.|+..+.+++...  +.+..++|.+||.++..+       .|..+
T Consensus        89 fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~-------~P~~~  161 (282)
T KOG1205|consen   89 FGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMP-------LPFRS  161 (282)
T ss_pred             cCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccC-------CCccc
Confidence             4789999999986532   2233445668999999988777777654  234478999999975333       44445


Q ss_pred             chhhhhhhcccchhhHHHHHHHHHHHhccC-CC--ceEEEEeeceEEeC
Q 017977          189 DYCAKVYCLVSFNRGVLVCREWEGTALKVN-KD--VRLALIRIGIVLGK  234 (363)
Q Consensus       189 ~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~-~~--~~~~ilRp~~v~g~  234 (363)
                      .|.++|++..+|.         +....+.. .+  +.+ ++.||.|-..
T Consensus       162 ~Y~ASK~Al~~f~---------etLR~El~~~~~~i~i-~V~PG~V~Te  200 (282)
T KOG1205|consen  162 IYSASKHALEGFF---------ETLRQELIPLGTIIII-LVSPGPIETE  200 (282)
T ss_pred             ccchHHHHHHHHH---------HHHHHHhhccCceEEE-EEecCceeec
Confidence            7777776644443         22222221 13  333 6888888654

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.63  E-value=6.8e-15  Score=126.90  Aligned_cols=212  Identities=13%  Similarity=0.036  Sum_probs=131.5

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCC---CCCccccCcccccCcchHHhhcc-------CCCE
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP---GKKTRFFPGVMIAEEPQWRDCIQ-------GSTA  119 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~-------~~d~  119 (363)
                      +++|+||||+|+||+++++.|+++|++|++++|++.....+..   .........+|+.+.+++.++++       ++|.
T Consensus         5 ~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   84 (238)
T PRK05786          5 GKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAIDG   84 (238)
T ss_pred             CcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            4689999999999999999999999999999998765433211   00112244679998887766553       4699


Q ss_pred             EEEccCCCCCC-CCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhcc
Q 017977          120 VVNLAGTPIGT-RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLV  198 (363)
Q Consensus       120 Vi~~a~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~  198 (363)
                      +||+++..... ....+..+..++.|+.+...+++.+.+......++|++||..+.++      ..+....|..+     
T Consensus        85 ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~------~~~~~~~Y~~s-----  153 (238)
T PRK05786         85 LVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYK------ASPDQLSYAVA-----  153 (238)
T ss_pred             EEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhccc------CCCCchHHHHH-----
Confidence            99999853221 1122345667899999988888887764112356888888743222      11222234444     


Q ss_pred             cchhhHHHHHHHHHHHhc--cCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHHHHH
Q 017977          199 SFNRGVLVCREWEGTALK--VNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEA  276 (363)
Q Consensus       199 ~y~~~k~~~~~~~~~~~~--~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~  276 (363)
                           |............  ...+++++++||++++++..... .    +...  .+.     ...++..+|+++++..+
T Consensus       154 -----K~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~~-~----~~~~--~~~-----~~~~~~~~~va~~~~~~  216 (238)
T PRK05786        154 -----KAGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPER-N----WKKL--RKL-----GDDMAPPEDFAKVIIWL  216 (238)
T ss_pred             -----HHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCchh-h----hhhh--ccc-----cCCCCCHHHHHHHHHHH
Confidence                 3222222222111  12389999999999998742110 0    0000  000     11357889999999999


Q ss_pred             hcCCC--CCc-eEEee
Q 017977          277 LSNPS--YRG-VINGT  289 (363)
Q Consensus       277 ~~~~~--~~g-~~~i~  289 (363)
                      +....  ..| .+.+.
T Consensus       217 ~~~~~~~~~g~~~~~~  232 (238)
T PRK05786        217 LTDEADWVDGVVIPVD  232 (238)
T ss_pred             hcccccCccCCEEEEC
Confidence            97543  344 44443

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.62  E-value=2.5e-14  Score=124.68  Aligned_cols=221  Identities=10%  Similarity=-0.000  Sum_probs=133.8

Q ss_pred             ccEEEEecCc--chHHHHHHHHHHhCCCEEEEEeCCCCc---ccccCCC--CCccccCcccccCcchHHhhcc-------
Q 017977           50 QMTVSVTGAT--GFIGRRLVQRLQADNHQVRVLTRSRSK---AELIFPG--KKTRFFPGVMIAEEPQWRDCIQ-------  115 (363)
Q Consensus        50 ~~~vlVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~---~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~-------  115 (363)
                      .++++||||+  +.||++++++|+++|++|++++|+...   .+.+...  ........+|+.|.+++.++++       
T Consensus         7 ~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   86 (257)
T PRK08594          7 GKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEVG   86 (257)
T ss_pred             CCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhCC
Confidence            4689999997  899999999999999999999876422   1111111  1112244689999888776653       


Q ss_pred             CCCEEEEccCCCCC-------CCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCc
Q 017977          116 GSTAVVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLS  188 (363)
Q Consensus       116 ~~d~Vi~~a~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~  188 (363)
                      .+|++|||||....       ...+.+.....+++|+.+...+.+++.+.-....++|++||..+..+       .+...
T Consensus        87 ~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~-------~~~~~  159 (257)
T PRK08594         87 VIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGERV-------VQNYN  159 (257)
T ss_pred             CccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCccC-------CCCCc
Confidence            47999999986421       12234455677899999988888887764112357999998843221       22234


Q ss_pred             chhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHH-HhCCCCCCCCCccccccHH
Q 017977          189 DYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMM-FAGGPLGSGQQWFSWIHLD  267 (363)
Q Consensus       189 ~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~  267 (363)
                      .|..+|.+...+.++  +..+     +. ..|+++..+.||.+..+.............. ....++      ..+...+
T Consensus       160 ~Y~asKaal~~l~~~--la~e-----l~-~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------~r~~~p~  225 (257)
T PRK08594        160 VMGVAKASLEASVKY--LAND-----LG-KDGIRVNAISAGPIRTLSAKGVGGFNSILKEIEERAPL------RRTTTQE  225 (257)
T ss_pred             hhHHHHHHHHHHHHH--HHHH-----hh-hcCCEEeeeecCcccCHhHhhhccccHHHHHHhhcCCc------cccCCHH
Confidence            566555443333221  1111     11 2389999999999876521110000000111 111111      2357899


Q ss_pred             HHHHHHHHHhcCCC--CCc-eEEeeCC
Q 017977          268 DIVNLIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       268 D~a~a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      |+|++++.++....  ..| .+.+.++
T Consensus       226 ~va~~~~~l~s~~~~~~tG~~~~~dgg  252 (257)
T PRK08594        226 EVGDTAAFLFSDLSRGVTGENIHVDSG  252 (257)
T ss_pred             HHHHHHHHHcCcccccccceEEEECCc
Confidence            99999999987543  345 5555443

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.62  E-value=3.1e-15  Score=134.12  Aligned_cols=181  Identities=12%  Similarity=0.041  Sum_probs=116.5

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccC----CC--CCccccCcccccCcchHHhhcc-------
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PG--KKTRFFPGVMIAEEPQWRDCIQ-------  115 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~--~~~~~~~~~d~~~~~~~~~~~~-------  115 (363)
                      .+++++||||+|+||+++++.|+++|++|++++|+.++.+...    ..  .....+..+|+.|.++++++++       
T Consensus        13 ~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~   92 (313)
T PRK05854         13 SGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGR   92 (313)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCC
Confidence            4579999999999999999999999999999999876533221    11  1112245689999888876654       


Q ss_pred             CCCEEEEccCCCCCC--CCChhhHHHHHHHHHHHHHHHHHHHHhC-CCCCCCeEEEeccceecCCcccccccCCCcchhh
Q 017977          116 GSTAVVNLAGTPIGT--RWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCA  192 (363)
Q Consensus       116 ~~d~Vi~~a~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~  192 (363)
                      .+|++||+||.....  ....+..+..+++|+.+...+.+.+... ..+..++|++||.++.++...++.... ...|. 
T Consensus        93 ~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~~~~~~~~~-~~~~~-  170 (313)
T PRK05854         93 PIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGAINWDDLNW-ERSYA-  170 (313)
T ss_pred             CccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCCcCcccccc-cccCc-
Confidence            489999999974321  2344567788999999988777777642 123457999999865554111111000 00111 


Q ss_pred             hhhhcccchhhHHHHHHHHHHHhc----cCCCceEEEEeeceEEeC
Q 017977          193 KVYCLVSFNRGVLVCREWEGTALK----VNKDVRLALIRIGIVLGK  234 (363)
Q Consensus       193 ~~~~~~~y~~~k~~~~~~~~~~~~----~~~~~~~~ilRp~~v~g~  234 (363)
                         ....|..+|.....+......    ...|+.++.+.||.+..+
T Consensus       171 ---~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~  213 (313)
T PRK05854        171 ---GMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTN  213 (313)
T ss_pred             ---chhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccC
Confidence               112355555443333332221    123899999999998765

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.62  E-value=2.8e-14  Score=124.46  Aligned_cols=215  Identities=15%  Similarity=0.024  Sum_probs=131.1

Q ss_pred             ccEEEEecCcc--hHHHHHHHHHHhCCCEEEEEeCCCCcc---------------cccCCCCCccccCcccccCcchHHh
Q 017977           50 QMTVSVTGATG--FIGRRLVQRLQADNHQVRVLTRSRSKA---------------ELIFPGKKTRFFPGVMIAEEPQWRD  112 (363)
Q Consensus        50 ~~~vlVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~---------------~~~~~~~~~~~~~~~d~~~~~~~~~  112 (363)
                      +++|+||||+|  .||.++++.|+++|++|++++|++.+.               ..+........+..+|+.+.+++..
T Consensus         5 ~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   84 (256)
T PRK12748          5 KKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAPNR   84 (256)
T ss_pred             CcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHHHH
Confidence            46899999995  799999999999999999999973211               0010111112345689988887765


Q ss_pred             hcc-------CCCEEEEccCCCCCCC---CChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCccc
Q 017977          113 CIQ-------GSTAVVNLAGTPIGTR---WSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAH  180 (363)
Q Consensus       113 ~~~-------~~d~Vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~  180 (363)
                      +++       .+|+|||+|+......   ...+..+..+++|+.++..+++++.+.  .....++|++||. ..++.   
T Consensus        85 ~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~-~~~~~---  160 (256)
T PRK12748         85 VFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSG-QSLGP---  160 (256)
T ss_pred             HHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCc-cccCC---
Confidence            553       5799999998643222   234556778999999999999998652  1234579999987 32220   


Q ss_pred             ccccCCCcchhhhhhhcccchhhHHHHHHHHHHHhc--cCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCC
Q 017977          181 QEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALK--VNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQ  258 (363)
Q Consensus       181 ~e~~~~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~--~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~  258 (363)
                         .+....|..+|.+          ...+......  ...+++++.++|+.+..+....  .....+  ....+     
T Consensus       161 ---~~~~~~Y~~sK~a----------~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~--~~~~~~--~~~~~-----  218 (256)
T PRK12748        161 ---MPDELAYAATKGA----------IEAFTKSLAPELAEKGITVNAVNPGPTDTGWITE--ELKHHL--VPKFP-----  218 (256)
T ss_pred             ---CCCchHHHHHHHH----------HHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCCh--hHHHhh--hccCC-----
Confidence               1122345444322          2222111111  1238999999999887653221  111111  00111     


Q ss_pred             CccccccHHHHHHHHHHHhcCCC--CCc-eEEeeCC
Q 017977          259 QWFSWIHLDDIVNLIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       259 ~~~~~i~v~D~a~a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                       ...+...+|+|+++..++....  ..| .+++.++
T Consensus       219 -~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d~g  253 (256)
T PRK12748        219 -QGRVGEPVDAARLIAFLVSEEAKWITGQVIHSEGG  253 (256)
T ss_pred             -CCCCcCHHHHHHHHHHHhCcccccccCCEEEecCC
Confidence             1124568999999998886533  334 6666554

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.62  E-value=3.7e-14  Score=126.85  Aligned_cols=217  Identities=16%  Similarity=0.001  Sum_probs=129.6

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCc-ccc----cCCCCCccccCcccccCcchHHhhcc------C
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK-AEL----IFPGKKTRFFPGVMIAEEPQWRDCIQ------G  116 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~----~~~~~~~~~~~~~d~~~~~~~~~~~~------~  116 (363)
                      ..+++++||||+|+||++++++|+++|++|++.+++... .+.    +...........+|+.|.+++.++++      .
T Consensus        10 l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~   89 (306)
T PRK07792         10 LSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGG   89 (306)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCC
Confidence            345799999999999999999999999999999886432 111    11111122245679988887776654      5


Q ss_pred             CCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC-C-C-------CCCCeEEEeccceecCCccccccc
Q 017977          117 STAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES-P-E-------GVRPSVLELVKPKYLMRAAHQEMI  184 (363)
Q Consensus       117 ~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~-------~~~~~v~~SS~~~~yg~~~~~e~~  184 (363)
                      +|+|||+||.....   ....+..+..+++|+.++.++++++... . .       ...++|++||.++..+       .
T Consensus        90 iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------~  162 (306)
T PRK07792         90 LDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVG-------P  162 (306)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccC-------C
Confidence            89999999975332   2345567788999999999999887531 0 0       1246899998744332       2


Q ss_pred             CCCcchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccc
Q 017977          185 TWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWI  264 (363)
Q Consensus       185 ~~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  264 (363)
                      +....|..+|.+...+.++      +..+ + ..+|+.+..+.|+. ..+..   ........    ...   ......+
T Consensus       163 ~~~~~Y~asKaal~~l~~~------la~e-~-~~~gI~vn~i~Pg~-~t~~~---~~~~~~~~----~~~---~~~~~~~  223 (306)
T PRK07792        163 VGQANYGAAKAGITALTLS------AARA-L-GRYGVRANAICPRA-RTAMT---ADVFGDAP----DVE---AGGIDPL  223 (306)
T ss_pred             CCCchHHHHHHHHHHHHHH------HHHH-h-hhcCeEEEEECCCC-CCchh---hhhccccc----hhh---hhccCCC
Confidence            2233565554332222211      0111 1 12489999999973 11100   00000000    000   0112356


Q ss_pred             cHHHHHHHHHHHhcCCC--CCc-eEEeeC
Q 017977          265 HLDDIVNLIYEALSNPS--YRG-VINGTA  290 (363)
Q Consensus       265 ~v~D~a~a~~~~~~~~~--~~g-~~~i~~  290 (363)
                      .++|++.++..++....  ..| +|.+.+
T Consensus       224 ~pe~va~~v~~L~s~~~~~~tG~~~~v~g  252 (306)
T PRK07792        224 SPEHVVPLVQFLASPAAAEVNGQVFIVYG  252 (306)
T ss_pred             CHHHHHHHHHHHcCccccCCCCCEEEEcC
Confidence            89999999998886532  344 555544

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.62  E-value=2.5e-14  Score=130.72  Aligned_cols=110  Identities=18%  Similarity=0.199  Sum_probs=85.9

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCC-CCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP-GKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      .++++|+||||+|+||++++++|.++|++|++++|+.++...... .........+|+.|.+++.+.+.++|++||+||.
T Consensus       176 l~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInnAGi  255 (406)
T PRK07424        176 LKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILIINHGI  255 (406)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEECCCc
Confidence            345799999999999999999999999999999998754322111 1101113457888999999989999999999997


Q ss_pred             CCCCCCChhhHHHHHHHHHHHHHHHHHHHHh
Q 017977          127 PIGTRWSSEIKKEIKESRIRVTSKVVDLINE  157 (363)
Q Consensus       127 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  157 (363)
                      ......+.+..+..+++|+.++.++++++.+
T Consensus       256 ~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp  286 (406)
T PRK07424        256 NVHGERTPEAINKSYEVNTFSAWRLMELFFT  286 (406)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5444555666788999999999999999865

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.62  E-value=2.2e-14  Score=125.23  Aligned_cols=221  Identities=14%  Similarity=0.043  Sum_probs=133.8

Q ss_pred             ccEEEEecCc--chHHHHHHHHHHhCCCEEEEEeCCCCc------ccccCCCCCccccCcccccCcchHHhhcc------
Q 017977           50 QMTVSVTGAT--GFIGRRLVQRLQADNHQVRVLTRSRSK------AELIFPGKKTRFFPGVMIAEEPQWRDCIQ------  115 (363)
Q Consensus        50 ~~~vlVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~------~~~~~~~~~~~~~~~~d~~~~~~~~~~~~------  115 (363)
                      +++++||||+  +.||++++++|+++|++|++..|+...      ...+...........+|+.|.+++.++++      
T Consensus         6 ~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~   85 (258)
T PRK07370          6 GKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQKW   85 (258)
T ss_pred             CcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHHc
Confidence            4689999986  799999999999999999888765431      11121111112245689999988876653      


Q ss_pred             -CCCEEEEccCCCCC-------CCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCC
Q 017977          116 -GSTAVVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWL  187 (363)
Q Consensus       116 -~~d~Vi~~a~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~  187 (363)
                       .+|++|||||....       ...+.+..+..+++|+.++..+.+++.+.-....++|++||.++..+       .+..
T Consensus        86 g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~~-------~~~~  158 (258)
T PRK07370         86 GKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVRA-------IPNY  158 (258)
T ss_pred             CCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccccccC-------Cccc
Confidence             57999999996421       12234556788999999999998887764112257999998743211       1223


Q ss_pred             cchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHH-HhCCCCCCCCCccccccH
Q 017977          188 SDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMM-FAGGPLGSGQQWFSWIHL  266 (363)
Q Consensus       188 ~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~v  266 (363)
                      ..|..+|.+...+.++       ....+. ..|+.++.+.||.+-.+.............. ....++      ..+...
T Consensus       159 ~~Y~asKaal~~l~~~-------la~el~-~~gI~Vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------~r~~~~  224 (258)
T PRK07370        159 NVMGVAKAALEASVRY-------LAAELG-PKNIRVNAISAGPIRTLASSAVGGILDMIHHVEEKAPL------RRTVTQ  224 (258)
T ss_pred             chhhHHHHHHHHHHHH-------HHHHhC-cCCeEEEEEecCcccCchhhccccchhhhhhhhhcCCc------CcCCCH
Confidence            3455554332222211       111111 2489999999999976532111000000111 111111      236778


Q ss_pred             HHHHHHHHHHhcCCC--CCc-eEEeeCC
Q 017977          267 DDIVNLIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       267 ~D~a~a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      +|+++++..++....  ..| .+.+.++
T Consensus       225 ~dva~~~~fl~s~~~~~~tG~~i~vdgg  252 (258)
T PRK07370        225 TEVGNTAAFLLSDLASGITGQTIYVDAG  252 (258)
T ss_pred             HHHHHHHHHHhChhhccccCcEEEECCc
Confidence            999999999987543  344 5555544

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.62  E-value=8.9e-15  Score=127.25  Aligned_cols=218  Identities=11%  Similarity=0.038  Sum_probs=127.2

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCc-ccccCCC-CCccccCcccccCcchHHhhccCC----------
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK-AELIFPG-KKTRFFPGVMIAEEPQWRDCIQGS----------  117 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~----------  117 (363)
                      |++|+||||+|+||++++++|+++|++|++++|+..+ ...+... ........+|+.+.+++..+++.+          
T Consensus         1 ~k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~   80 (251)
T PRK06924          1 MRYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSSIQEDNVS   80 (251)
T ss_pred             CcEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHhcCcccCC
Confidence            4689999999999999999999999999999998732 2221111 112224568999988887766422          


Q ss_pred             -CEEEEccCCCCC----CCCChhhHHHHHHHHHHHHHHHHHHHHhC-C-C-CCCCeEEEeccceecCCcccccccCCCcc
Q 017977          118 -TAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES-P-E-GVRPSVLELVKPKYLMRAAHQEMITWLSD  189 (363)
Q Consensus       118 -d~Vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~-~~~~~v~~SS~~~~yg~~~~~e~~~~~~~  189 (363)
                       .++||++|....    ...+.+.....+++|+.+...+++.+... . . +.+++|++||..+ +      ...+....
T Consensus        81 ~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~-~------~~~~~~~~  153 (251)
T PRK06924         81 SIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAA-K------NPYFGWSA  153 (251)
T ss_pred             ceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhh-c------CCCCCcHH
Confidence             278999986322    12345566778889999876666655442 1 2 3457999998732 1      11223334


Q ss_pred             hhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc----cchHHHHHHHhCCCCCCCCCcccccc
Q 017977          190 YCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL----AKMIPLFMMFAGGPLGSGQQWFSWIH  265 (363)
Q Consensus       190 ~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~i~  265 (363)
                      |..+|.+...+.+      .+..+......++++..++||.+-.+.....    ............. ..    ...+..
T Consensus       154 Y~~sKaa~~~~~~------~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~  222 (251)
T PRK06924        154 YCSSKAGLDMFTQ------TVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFITL-KE----EGKLLS  222 (251)
T ss_pred             HhHHHHHHHHHHH------HHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHHHHH-hh----cCCcCC
Confidence            5554432222211      1111111122489999999998865531100    0000000000000 00    012688


Q ss_pred             HHHHHHHHHHHhcCC-CCCce
Q 017977          266 LDDIVNLIYEALSNP-SYRGV  285 (363)
Q Consensus       266 v~D~a~a~~~~~~~~-~~~g~  285 (363)
                      ++|+|++++.++... ...|.
T Consensus       223 ~~dva~~~~~l~~~~~~~~G~  243 (251)
T PRK06924        223 PEYVAKALRNLLETEDFPNGE  243 (251)
T ss_pred             HHHHHHHHHHHHhcccCCCCC
Confidence            999999999999763 34453

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.61  E-value=1.8e-14  Score=127.69  Aligned_cols=219  Identities=18%  Similarity=0.098  Sum_probs=133.6

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCC---------Ccccc----cCCCCCccccCcccccCcchHHhhcc
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR---------SKAEL----IFPGKKTRFFPGVMIAEEPQWRDCIQ  115 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~---------~~~~~----~~~~~~~~~~~~~d~~~~~~~~~~~~  115 (363)
                      +.++++||||++.||+++++.|+++|++|++++|+.         .....    +...........+|+.|.+++.++++
T Consensus         5 ~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~   84 (286)
T PRK07791          5 DGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLVD   84 (286)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHH
Confidence            346899999999999999999999999999998765         22111    11111112244579999887766553


Q ss_pred             -------CCCEEEEccCCCCC---CCCChhhHHHHHHHHHHHHHHHHHHHHhC-C-C---C---CCCeEEEeccceecCC
Q 017977          116 -------GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES-P-E---G---VRPSVLELVKPKYLMR  177 (363)
Q Consensus       116 -------~~d~Vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~---~---~~~~v~~SS~~~~yg~  177 (363)
                             .+|++||+||....   .....+..+..+++|+.++..+++++... . .   +   ..++|++||.++..+ 
T Consensus        85 ~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~-  163 (286)
T PRK07791         85 AAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQG-  163 (286)
T ss_pred             HHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCcC-
Confidence                   57999999997432   22345667889999999998888777532 0 1   1   246999998754333 


Q ss_pred             cccccccCCCcchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCC
Q 017977          178 AAHQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSG  257 (363)
Q Consensus       178 ~~~~e~~~~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~  257 (363)
                            .+....|..+|.+...+.++  +..++     . ..|++++.|.|+ +..+..   ......   ....+   +
T Consensus       164 ------~~~~~~Y~asKaal~~l~~~--la~el-----~-~~gIrVn~v~Pg-~~T~~~---~~~~~~---~~~~~---~  219 (286)
T PRK07791        164 ------SVGQGNYSAAKAGIAALTLV--AAAEL-----G-RYGVTVNAIAPA-ARTRMT---ETVFAE---MMAKP---E  219 (286)
T ss_pred             ------CCCchhhHHHHHHHHHHHHH--HHHHH-----H-HhCeEEEEECCC-CCCCcc---hhhHHH---HHhcC---c
Confidence                  22334566665443333321  11111     1 138999999998 422211   111111   11111   0


Q ss_pred             CCccccccHHHHHHHHHHHhcCCC--CCc-eEEeeCCC
Q 017977          258 QQWFSWIHLDDIVNLIYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       258 ~~~~~~i~v~D~a~a~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      .....+...+|+|++++.++....  ..| .+.+.++.
T Consensus       220 ~~~~~~~~pedva~~~~~L~s~~~~~itG~~i~vdgG~  257 (286)
T PRK07791        220 EGEFDAMAPENVSPLVVWLGSAESRDVTGKVFEVEGGK  257 (286)
T ss_pred             ccccCCCCHHHHHHHHHHHhCchhcCCCCcEEEEcCCc
Confidence            111235689999999999987533  455 55555543

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.61  E-value=6e-15  Score=127.66  Aligned_cols=167  Identities=14%  Similarity=0.086  Sum_probs=108.1

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc-----------CCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-----------GST  118 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-----------~~d  118 (363)
                      ||+|+||||+|+||++++++|+++|++|++++|+..+... ...........+|+.+.+++.+++.           .+|
T Consensus         1 ~~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (243)
T PRK07023          1 AVRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSLA-AAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRV   79 (243)
T ss_pred             CceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchhhh-hccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCce
Confidence            5799999999999999999999999999999998654221 1111112244689999887776332           468


Q ss_pred             EEEEccCCCCC-C---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhh
Q 017977          119 AVVNLAGTPIG-T---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCA  192 (363)
Q Consensus       119 ~Vi~~a~~~~~-~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~  192 (363)
                      ++||+++.... .   ..+.+..+..+++|+.++..+.+.+.+.  ..+.+++|++||.++ +.      ..+....|..
T Consensus        80 ~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~-~~------~~~~~~~Y~~  152 (243)
T PRK07023         80 LLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAA-RN------AYAGWSVYCA  152 (243)
T ss_pred             EEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhh-cC------CCCCchHHHH
Confidence            99999986432 1   2234556788899999977666655542  134567999999832 21      0112223444


Q ss_pred             hhhhcccchhhHHHHHHHHHHHhc-cCCCceEEEEeeceEEeC
Q 017977          193 KVYCLVSFNRGVLVCREWEGTALK-VNKDVRLALIRIGIVLGK  234 (363)
Q Consensus       193 ~~~~~~~y~~~k~~~~~~~~~~~~-~~~~~~~~ilRp~~v~g~  234 (363)
                      +          |...+........ ...++++..++|+.+-.+
T Consensus       153 s----------K~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~  185 (243)
T PRK07023        153 T----------KAALDHHARAVALDANRALRIVSLAPGVVDTG  185 (243)
T ss_pred             H----------HHHHHHHHHHHHhcCCCCcEEEEecCCccccH
Confidence            3          4222222222222 223899999999988554

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.60  E-value=8.9e-14  Score=120.66  Aligned_cols=201  Identities=13%  Similarity=0.096  Sum_probs=124.1

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccC----CCC-CccccCccccc--CcchHHh-------hc
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGK-KTRFFPGVMIA--EEPQWRD-------CI  114 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~-~~~~~~~~d~~--~~~~~~~-------~~  114 (363)
                      ..++|+||||+|+||.+++++|++.|++|++++|+..+...+.    ... ....+..+|+.  +.+++.+       .+
T Consensus        11 ~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~   90 (247)
T PRK08945         11 KDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEEQF   90 (247)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHHHh
Confidence            4469999999999999999999999999999999875532221    111 11112234554  3443333       33


Q ss_pred             cCCCEEEEccCCCCC----CCCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCc
Q 017977          115 QGSTAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLS  188 (363)
Q Consensus       115 ~~~d~Vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~  188 (363)
                      ..+|+|||+|+....    .....+..+..+++|+.++.++++++...  ..+.+++|++||..+.++       .+...
T Consensus        91 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~-------~~~~~  163 (247)
T PRK08945         91 GRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQG-------RANWG  163 (247)
T ss_pred             CCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCC-------CCCCc
Confidence            468999999986322    12334566788999999988888877431  146678999998744332       12223


Q ss_pred             chhhhhhhcccchhhHHHHHHHHHHHhc--cCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccH
Q 017977          189 DYCAKVYCLVSFNRGVLVCREWEGTALK--VNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHL  266 (363)
Q Consensus       189 ~~~~~~~~~~~y~~~k~~~~~~~~~~~~--~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  266 (363)
                      .|..+          |............  ...++++++++|+.+-++....   ..      ...      ....+...
T Consensus       164 ~Y~~s----------K~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~---~~------~~~------~~~~~~~~  218 (247)
T PRK08945        164 AYAVS----------KFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRAS---AF------PGE------DPQKLKTP  218 (247)
T ss_pred             ccHHH----------HHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhh---hc------Ccc------cccCCCCH
Confidence            44444          3222222221111  1138999999999886652110   00      000      01136789


Q ss_pred             HHHHHHHHHHhcCCC
Q 017977          267 DDIVNLIYEALSNPS  281 (363)
Q Consensus       267 ~D~a~a~~~~~~~~~  281 (363)
                      +|+++++..++....
T Consensus       219 ~~~~~~~~~~~~~~~  233 (247)
T PRK08945        219 EDIMPLYLYLMGDDS  233 (247)
T ss_pred             HHHHHHHHHHhCccc
Confidence            999999999886543

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.60  E-value=7.1e-14  Score=120.32  Aligned_cols=213  Identities=10%  Similarity=0.044  Sum_probs=130.2

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCC--CEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhh---ccCCCEEEEccC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC---IQGSTAVVNLAG  125 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~---~~~~d~Vi~~a~  125 (363)
                      |+|+||||+|+||++++++|+++|  +.|....|+......    .....+..+|+.+.++++++   +.++|+|||+||
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~~~----~~~~~~~~~Dls~~~~~~~~~~~~~~id~li~~aG   76 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPDFQ----HDNVQWHALDVTDEAEIKQLSEQFTQLDWLINCVG   76 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccccc----cCceEEEEecCCCHHHHHHHHHhcCCCCEEEECCc
Confidence            589999999999999999999985  566666675533211    11122456899888776554   457899999999


Q ss_pred             CCCCC---------CCChhhHHHHHHHHHHHHHHHHHHHHhC-C-CCCCCeEEEeccceecCCcccccccCCCcchhhhh
Q 017977          126 TPIGT---------RWSSEIKKEIKESRIRVTSKVVDLINES-P-EGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKV  194 (363)
Q Consensus       126 ~~~~~---------~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~  194 (363)
                      .....         ..+.+.....+++|+.+...+.+++.+. . .+..+++++||..+...    .+..+....|..+|
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~~----~~~~~~~~~Y~asK  152 (235)
T PRK09009         77 MLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSIS----DNRLGGWYSYRASK  152 (235)
T ss_pred             cccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecccccc----cCCCCCcchhhhhH
Confidence            75321         1123445678899999988888887763 1 23456888887532111    11122233566555


Q ss_pred             hhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHHH
Q 017977          195 YCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY  274 (363)
Q Consensus       195 ~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~  274 (363)
                      .+...|.++      +..+......++.+..+.||.+..+.....         ....+      ...++..+|+|+++.
T Consensus       153 ~a~~~~~~~------la~e~~~~~~~i~v~~v~PG~v~t~~~~~~---------~~~~~------~~~~~~~~~~a~~~~  211 (235)
T PRK09009        153 AALNMFLKT------LSIEWQRSLKHGVVLALHPGTTDTALSKPF---------QQNVP------KGKLFTPEYVAQCLL  211 (235)
T ss_pred             HHHHHHHHH------HHHHhhcccCCeEEEEEcccceecCCCcch---------hhccc------cCCCCCHHHHHHHHH
Confidence            443333221      111111111389999999999877643210         01111      122578999999999


Q ss_pred             HHhcCCC--CCceEEeeCCC
Q 017977          275 EALSNPS--YRGVINGTAPN  292 (363)
Q Consensus       275 ~~~~~~~--~~g~~~i~~~~  292 (363)
                      .++....  ..|.+....++
T Consensus       212 ~l~~~~~~~~~g~~~~~~g~  231 (235)
T PRK09009        212 GIIANATPAQSGSFLAYDGE  231 (235)
T ss_pred             HHHHcCChhhCCcEEeeCCc
Confidence            9997754  45544444433

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.60  E-value=1.3e-14  Score=124.06  Aligned_cols=173  Identities=13%  Similarity=0.041  Sum_probs=110.9

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc-----CCCEEEEcc
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-----GSTAVVNLA  124 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-----~~d~Vi~~a  124 (363)
                      |++|+||||+|++|++++++|+++|++|++++|++.......... ......+|+.|.+++.++++     ++|+|||+|
T Consensus         1 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~a   79 (225)
T PRK08177          1 KRTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQALP-GVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNA   79 (225)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHhcc-ccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcC
Confidence            368999999999999999999999999999999986654332211 12244578888887776655     589999999


Q ss_pred             CCCCC-----CCCChhhHHHHHHHHHHHHHHHHHHHHhC-CCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhcc
Q 017977          125 GTPIG-----TRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLV  198 (363)
Q Consensus       125 ~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~  198 (363)
                      |....     .....+.....+++|+.++..+++++.+. ..+...++++||..+..+   . ......+.|..+|.+..
T Consensus        80 g~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~g~~~---~-~~~~~~~~Y~~sK~a~~  155 (225)
T PRK08177         80 GISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQLGSVE---L-PDGGEMPLYKASKAALN  155 (225)
T ss_pred             cccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCccccc---c-CCCCCccchHHHHHHHH
Confidence            87422     12234556778899999999999988753 223345777776522111   0 01112234555432222


Q ss_pred             cchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCC
Q 017977          199 SFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKD  235 (363)
Q Consensus       199 ~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~  235 (363)
                      .|.+      .... .+. ..++.++.++||.+-.+.
T Consensus       156 ~~~~------~l~~-e~~-~~~i~v~~i~PG~i~t~~  184 (225)
T PRK08177        156 SMTR------SFVA-ELG-EPTLTVLSMHPGWVKTDM  184 (225)
T ss_pred             HHHH------HHHH-Hhh-cCCeEEEEEcCCceecCC
Confidence            2211      0001 111 238999999999987664

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.60  E-value=8.4e-14  Score=121.70  Aligned_cols=220  Identities=16%  Similarity=0.083  Sum_probs=134.1

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCC----C-CCccccCcccccCcchHHhhcc---CCCEEE
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----G-KKTRFFPGVMIAEEPQWRDCIQ---GSTAVV  121 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~-~~~~~~~~~d~~~~~~~~~~~~---~~d~Vi  121 (363)
                      .++++||||+|.||+++++.|+++|++|++++|+..+......    . ........+|+.+.+++.++++   .+|++|
T Consensus         7 ~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~lv   86 (259)
T PRK06125          7 GKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDIDILV   86 (259)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCCEEE
Confidence            4699999999999999999999999999999998765433211    1 1111244578888888876654   589999


Q ss_pred             EccCCCCC---CCCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhhhhh
Q 017977          122 NLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYC  196 (363)
Q Consensus       122 ~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~  196 (363)
                      |++|....   .....+..+..+++|+.+...+.+++.+.  ..+..++|++||..+..+       .+....|..+|.+
T Consensus        87 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~-------~~~~~~y~ask~a  159 (259)
T PRK06125         87 NNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGENP-------DADYICGSAGNAA  159 (259)
T ss_pred             ECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccCC-------CCCchHhHHHHHH
Confidence            99986432   22345566788999999988888877532  133456888888743111       1111233333322


Q ss_pred             cccchhhHHHHHHHHHHHh-ccCCCceEEEEeeceEEeCCCCccc------ch--HHHH-HHHhCCCCCCCCCccccccH
Q 017977          197 LVSFNRGVLVCREWEGTAL-KVNKDVRLALIRIGIVLGKDGGALA------KM--IPLF-MMFAGGPLGSGQQWFSWIHL  266 (363)
Q Consensus       197 ~~~y~~~k~~~~~~~~~~~-~~~~~~~~~ilRp~~v~g~~~~~~~------~~--~~~~-~~~~~~~~~~~~~~~~~i~v  266 (363)
                      ...|.         ..... ....|++++.++||.+..+......      .+  ...+ ......+.      ..+..+
T Consensus       160 l~~~~---------~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~  224 (259)
T PRK06125        160 LMAFT---------RALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAGLPL------GRPATP  224 (259)
T ss_pred             HHHHH---------HHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHhccCCc------CCCcCH
Confidence            21111         11111 1224899999999998766211000      00  0000 00111111      136789


Q ss_pred             HHHHHHHHHHhcCCC--CCc-eEEeeCC
Q 017977          267 DDIVNLIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       267 ~D~a~a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      +|+|++++.++....  ..| .+.+.++
T Consensus       225 ~~va~~~~~l~~~~~~~~~G~~i~vdgg  252 (259)
T PRK06125        225 EEVADLVAFLASPRSGYTSGTVVTVDGG  252 (259)
T ss_pred             HHHHHHHHHHcCchhccccCceEEecCC
Confidence            999999999986543  355 5566554

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.59  E-value=4.9e-14  Score=119.58  Aligned_cols=206  Identities=14%  Similarity=0.072  Sum_probs=143.5

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCC---CccccCcccccCcchHHhhcc-------CC
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK---KTRFFPGVMIAEEPQWRDCIQ-------GS  117 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~~-------~~  117 (363)
                      ..+..||||||.+.+|+.++.+++++|.++.+.+.+.....+..+..   +......+|+.+.+++.+..+       ++
T Consensus        36 v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G~V  115 (300)
T KOG1201|consen   36 VSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVGDV  115 (300)
T ss_pred             ccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcCCc
Confidence            34568999999999999999999999999999999886643321111   123345689999887766543       68


Q ss_pred             CEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhh
Q 017977          118 TAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCA  192 (363)
Q Consensus       118 d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~  192 (363)
                      |++||+||.....   ..+++.-+..+++|+.+.....++....  ..+..++|-++|..+..|       .+...+|++
T Consensus       116 ~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g-------~~gl~~Yca  188 (300)
T KOG1201|consen  116 DILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFG-------PAGLADYCA  188 (300)
T ss_pred             eEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccC-------Cccchhhhh
Confidence            9999999986552   3345566788999999987776666543  246678999999877555       445567888


Q ss_pred             hhhhcccchhhHHHHHHHHHHHhccC-CCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHH
Q 017977          193 KVYCLVSFNRGVLVCREWEGTALKVN-KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVN  271 (363)
Q Consensus       193 ~~~~~~~y~~~k~~~~~~~~~~~~~~-~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  271 (363)
                      +|++..+|..+      ...+..... .|++.+.+.|+.+=...-             .+ . ..-...+..+..+.+|+
T Consensus       189 SK~a~vGfhes------L~~EL~~~~~~~IktTlv~P~~i~Tgmf-------------~~-~-~~~~~l~P~L~p~~va~  247 (300)
T KOG1201|consen  189 SKFAAVGFHES------LSMELRALGKDGIKTTLVCPYFINTGMF-------------DG-A-TPFPTLAPLLEPEYVAK  247 (300)
T ss_pred             hHHHHHHHHHH------HHHHHHhcCCCCeeEEEEeeeecccccc-------------CC-C-CCCccccCCCCHHHHHH
Confidence            88777666543      222222222 379999999987652210             00 0 01122356789999999


Q ss_pred             HHHHHhcCCC
Q 017977          272 LIYEALSNPS  281 (363)
Q Consensus       272 a~~~~~~~~~  281 (363)
                      .++.++..+.
T Consensus       248 ~Iv~ai~~n~  257 (300)
T KOG1201|consen  248 RIVEAILTNQ  257 (300)
T ss_pred             HHHHHHHcCC
Confidence            9999998765

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.59  E-value=1.2e-13  Score=120.47  Aligned_cols=221  Identities=15%  Similarity=0.046  Sum_probs=133.1

Q ss_pred             ccEEEEecC--cchHHHHHHHHHHhCCCEEEEEeCCCC--cccccCCC-CCccccCcccccCcchHHhhcc-------CC
Q 017977           50 QMTVSVTGA--TGFIGRRLVQRLQADNHQVRVLTRSRS--KAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (363)
Q Consensus        50 ~~~vlVtGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~--~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (363)
                      .++++||||  ++.||.++++.|+++|++|++++|+..  ..+.+... ........+|+.|.+++.++++       ++
T Consensus         7 ~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i   86 (256)
T PRK07889          7 GKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVDGL   86 (256)
T ss_pred             CCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            468999999  899999999999999999999988642  12222111 1112245689999888776653       58


Q ss_pred             CEEEEccCCCCC-------CCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcch
Q 017977          118 TAVVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDY  190 (363)
Q Consensus       118 d~Vi~~a~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~  190 (363)
                      |++||+||....       ...+.+..+..+++|+.++..+.+++...-....++|++|+. +.       ...+....|
T Consensus        87 D~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~-~~-------~~~~~~~~Y  158 (256)
T PRK07889         87 DGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFD-AT-------VAWPAYDWM  158 (256)
T ss_pred             cEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeec-cc-------ccCCccchh
Confidence            999999997421       112334556679999999999888887641122468888765 21       111222334


Q ss_pred             hhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHH-HHhCCCCCCCCCccccccHHHH
Q 017977          191 CAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFM-MFAGGPLGSGQQWFSWIHLDDI  269 (363)
Q Consensus       191 ~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~D~  269 (363)
                      ..+|.+...+.++  +..+     +. ..|++++.+.||.+-.+............. .....+++     +.+..++|+
T Consensus       159 ~asKaal~~l~~~--la~e-----l~-~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~-----~~~~~p~ev  225 (256)
T PRK07889        159 GVAKAALESTNRY--LARD-----LG-PRGIRVNLVAAGPIRTLAAKAIPGFELLEEGWDERAPLG-----WDVKDPTPV  225 (256)
T ss_pred             HHHHHHHHHHHHH--HHHH-----hh-hcCeEEEeeccCcccChhhhcccCcHHHHHHHHhcCccc-----cccCCHHHH
Confidence            5555443333321  1111     11 238999999999997653211100000001 11111111     135789999


Q ss_pred             HHHHHHHhcCCC--CCc-eEEeeCC
Q 017977          270 VNLIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       270 a~a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      |++++.++....  ..| ++.+.++
T Consensus       226 A~~v~~l~s~~~~~~tG~~i~vdgg  250 (256)
T PRK07889        226 ARAVVALLSDWFPATTGEIVHVDGG  250 (256)
T ss_pred             HHHHHHHhCcccccccceEEEEcCc
Confidence            999999997643  345 4555443

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.59  E-value=3.2e-14  Score=127.70  Aligned_cols=199  Identities=15%  Similarity=0.074  Sum_probs=124.3

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCC------CCccccCcccccC--cch---HHhhccC--
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG------KKTRFFPGVMIAE--EPQ---WRDCIQG--  116 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~------~~~~~~~~~d~~~--~~~---~~~~~~~--  116 (363)
                      ++.++||||||+||++++++|+++|++|++++|++++.+.....      ........+|+.+  .+.   +.+.+.+  
T Consensus        53 g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~d  132 (320)
T PLN02780         53 GSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGLD  132 (320)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCCC
Confidence            46899999999999999999999999999999988664432111      0111123456663  222   2333343  


Q ss_pred             CCEEEEccCCCCC-----CCCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcc
Q 017977          117 STAVVNLAGTPIG-----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSD  189 (363)
Q Consensus       117 ~d~Vi~~a~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~  189 (363)
                      +|++||+||....     ...+.+..+..+++|+.++..+.+++...  ..+..++|++||.++.+..     ..|....
T Consensus       133 idilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~-----~~p~~~~  207 (320)
T PLN02780        133 VGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIP-----SDPLYAV  207 (320)
T ss_pred             ccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCC-----CCccchH
Confidence            5699999997422     12344556778999999999888887642  1455679999998432210     0122345


Q ss_pred             hhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHH
Q 017977          190 YCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDI  269 (363)
Q Consensus       190 ~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  269 (363)
                      |..+|.+...|.++      ...+ +. ..|++++.++||.+-.+....           ..       ...-....+++
T Consensus       208 Y~aSKaal~~~~~~------L~~E-l~-~~gI~V~~v~PG~v~T~~~~~-----------~~-------~~~~~~~p~~~  261 (320)
T PLN02780        208 YAATKAYIDQFSRC------LYVE-YK-KSGIDVQCQVPLYVATKMASI-----------RR-------SSFLVPSSDGY  261 (320)
T ss_pred             HHHHHHHHHHHHHH------HHHH-Hh-ccCeEEEEEeeCceecCcccc-----------cC-------CCCCCCCHHHH
Confidence            66554433333221      1111 11 238999999999997653210           00       00113578999


Q ss_pred             HHHHHHHhcC
Q 017977          270 VNLIYEALSN  279 (363)
Q Consensus       270 a~a~~~~~~~  279 (363)
                      |+.++..+..
T Consensus       262 A~~~~~~~~~  271 (320)
T PLN02780        262 ARAALRWVGY  271 (320)
T ss_pred             HHHHHHHhCC
Confidence            9999999864

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=99.58  E-value=6.9e-14  Score=125.14  Aligned_cols=213  Identities=20%  Similarity=0.124  Sum_probs=124.2

Q ss_pred             CCCCCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccc---cCcccccC-cchHHhhcc----C
Q 017977           45 TQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRF---FPGVMIAE-EPQWRDCIQ----G  116 (363)
Q Consensus        45 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~---~~~~d~~~-~~~~~~~~~----~  116 (363)
                      ..+..+++|+|+||||.+|+-+++.|+++|+.|+++.|+.+....+........   ....+... .+.+.....    .
T Consensus        74 ~~~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~~  153 (411)
T KOG1203|consen   74 NNSKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAVPKG  153 (411)
T ss_pred             CCCCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhcccccccccceeeeccccccchhhhhhhhcccc
Confidence            344556799999999999999999999999999999999988776644100000   01112222 222222222    2


Q ss_pred             CCEEEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhhhhhh
Q 017977          117 STAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYC  196 (363)
Q Consensus       117 ~d~Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~  196 (363)
                      ..+++-+++.....    ++...-..+...|++|+++||+.  .+++++|++|+.+. -     +-+.++...+...   
T Consensus       154 ~~~v~~~~ggrp~~----ed~~~p~~VD~~g~knlvdA~~~--aGvk~~vlv~si~~-~-----~~~~~~~~~~~~~---  218 (411)
T KOG1203|consen  154 VVIVIKGAGGRPEE----EDIVTPEKVDYEGTKNLVDACKK--AGVKRVVLVGSIGG-T-----KFNQPPNILLLNG---  218 (411)
T ss_pred             ceeEEecccCCCCc----ccCCCcceecHHHHHHHHHHHHH--hCCceEEEEEeecC-c-----ccCCCchhhhhhh---
Confidence            34666666542111    11122335778999999999999  89999999998842 0     1111111111000   


Q ss_pred             cccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHHHHH
Q 017977          197 LVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEA  276 (363)
Q Consensus       197 ~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~  276 (363)
                             ...+.+...+.+....|++++||||+...-..++.........     ......+..--.+.-.|+|+.++.+
T Consensus       219 -------~~~~~k~~~e~~~~~Sgl~ytiIR~g~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~i~r~~vael~~~a  286 (411)
T KOG1203|consen  219 -------LVLKAKLKAEKFLQDSGLPYTIIRPGGLEQDTGGQREVVVDDE-----KELLTVDGGAYSISRLDVAELVAKA  286 (411)
T ss_pred             -------hhhHHHHhHHHHHHhcCCCcEEEeccccccCCCCcceecccCc-----cccccccccceeeehhhHHHHHHHH
Confidence                   1123333344444456999999999988765443211111000     0011111111368889999999999


Q ss_pred             hcCCCCCc
Q 017977          277 LSNPSYRG  284 (363)
Q Consensus       277 ~~~~~~~g  284 (363)
                      +.+....+
T Consensus       287 ll~~~~~~  294 (411)
T KOG1203|consen  287 LLNEAATF  294 (411)
T ss_pred             Hhhhhhcc
Confidence            98877433

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.58  E-value=1.1e-13  Score=121.53  Aligned_cols=219  Identities=15%  Similarity=0.083  Sum_probs=127.5

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCC-Cccccc----CC-CCCccccCcccccCcchH----Hhhc------
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR-SKAELI----FP-GKKTRFFPGVMIAEEPQW----RDCI------  114 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~----~~-~~~~~~~~~~d~~~~~~~----~~~~------  114 (363)
                      ..++||||+|+||+++++.|+++|++|++++|+. ......    .. .........+|+.|.+++    .+.+      
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~   81 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA   81 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence            3799999999999999999999999999987653 222211    11 011112345799988754    2222      


Q ss_pred             -cCCCEEEEccCCCCCCCC---Ch-----------hhHHHHHHHHHHHHHHHHHHHHhCC--C------CCCCeEEEecc
Q 017977          115 -QGSTAVVNLAGTPIGTRW---SS-----------EIKKEIKESRIRVTSKVVDLINESP--E------GVRPSVLELVK  171 (363)
Q Consensus       115 -~~~d~Vi~~a~~~~~~~~---~~-----------~~~~~~~~~n~~~~~~l~~~~~~~~--~------~~~~~v~~SS~  171 (363)
                       .++|+||||||.......   ..           ......+++|+.++..+++++.+..  .      +...+|++||.
T Consensus        82 ~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~  161 (267)
T TIGR02685        82 FGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDA  161 (267)
T ss_pred             cCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehhh
Confidence             368999999996432111   11           1245789999999999988876431  1      11246777765


Q ss_pred             ceecCCcccccccCCCcchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhC
Q 017977          172 PKYLMRAAHQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAG  251 (363)
Q Consensus       172 ~~~yg~~~~~e~~~~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~  251 (363)
                      .+       ....+....|..+|.+...|.++       ....+. ..|+++++++|+.+..+.... ......+  ...
T Consensus       162 ~~-------~~~~~~~~~Y~asK~a~~~~~~~-------la~e~~-~~gi~v~~v~PG~~~~~~~~~-~~~~~~~--~~~  223 (267)
T TIGR02685       162 MT-------DQPLLGFTMYTMAKHALEGLTRS-------AALELA-PLQIRVNGVAPGLSLLPDAMP-FEVQEDY--RRK  223 (267)
T ss_pred             hc-------cCCCcccchhHHHHHHHHHHHHH-------HHHHHh-hhCeEEEEEecCCccCccccc-hhHHHHH--HHh
Confidence            22       11123334566554433222221       011111 238999999999987653211 1111111  111


Q ss_pred             CCCCCCCCccccccHHHHHHHHHHHhcCCC--CCc-eEEeeCCC
Q 017977          252 GPLGSGQQWFSWIHLDDIVNLIYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       252 ~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      .+++     ..+...+|++++++.++....  ..| .+.+.++.
T Consensus       224 ~~~~-----~~~~~~~~va~~~~~l~~~~~~~~~G~~~~v~gg~  262 (267)
T TIGR02685       224 VPLG-----QREASAEQIADVVIFLVSPKAKYITGTCIKVDGGL  262 (267)
T ss_pred             CCCC-----cCCCCHHHHHHHHHHHhCcccCCcccceEEECCce
Confidence            1211     125689999999999987643  345 55665553

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.58  E-value=6.5e-14  Score=123.37  Aligned_cols=229  Identities=16%  Similarity=0.059  Sum_probs=132.9

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccC----CCCCccccCcccccCcchHHhhcc------CCCEE
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ------GSTAV  120 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~------~~d~V  120 (363)
                      +.++|||| |+||+++++.|. +|++|++++|+..+.+...    ..........+|+.|.+++.++++      .+|+|
T Consensus         3 k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~l   80 (275)
T PRK06940          3 EVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTGL   80 (275)
T ss_pred             CEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCEE
Confidence            57899997 799999999996 7999999999875433221    111112245689999888876664      58999


Q ss_pred             EEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCc-------c---cccccCCCcch
Q 017977          121 VNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRA-------A---HQEMITWLSDY  190 (363)
Q Consensus       121 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~-------~---~~e~~~~~~~~  190 (363)
                      ||+||...    .....+.++++|+.++.++++++.+......++|++||.++.....       .   ++.......++
T Consensus        81 i~nAG~~~----~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (275)
T PRK06940         81 VHTAGVSP----SQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEELLSLPF  156 (275)
T ss_pred             EECCCcCC----chhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhcccccccccccccccc
Confidence            99999731    2345788999999999999999876411124567788774332210       0   00000000000


Q ss_pred             hhh---hhhcccchhhHHHHHHHHHHH-hc-cCCCceEEEEeeceEEeCCCCc-ccch-HHHH-HHHhCCCCCCCCCccc
Q 017977          191 CAK---VYCLVSFNRGVLVCREWEGTA-LK-VNKDVRLALIRIGIVLGKDGGA-LAKM-IPLF-MMFAGGPLGSGQQWFS  262 (363)
Q Consensus       191 ~~~---~~~~~~y~~~k~~~~~~~~~~-~~-~~~~~~~~ilRp~~v~g~~~~~-~~~~-~~~~-~~~~~~~~~~~~~~~~  262 (363)
                      ...   ......|..+|.....+.... .. ...|+.++.+.||.+..+.... .... .... ......++      ..
T Consensus       157 ~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~------~r  230 (275)
T PRK06940        157 LQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAKSPA------GR  230 (275)
T ss_pred             ccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHHHhhhCCc------cc
Confidence            000   001233555554432222211 11 1238999999999997763211 1000 0001 11111122      13


Q ss_pred             cccHHHHHHHHHHHhcCCC--CCc-eEEeeCC
Q 017977          263 WIHLDDIVNLIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       263 ~i~v~D~a~a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      +...+|+|+++..++....  ..| .+.+.++
T Consensus       231 ~~~peeia~~~~fL~s~~~~~itG~~i~vdgg  262 (275)
T PRK06940        231 PGTPDEIAALAEFLMGPRGSFITGSDFLVDGG  262 (275)
T ss_pred             CCCHHHHHHHHHHHcCcccCcccCceEEEcCC
Confidence            6789999999999886543  345 5666554

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.57  E-value=3.7e-14  Score=140.37  Aligned_cols=201  Identities=13%  Similarity=0.076  Sum_probs=131.8

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccC----CCCCccccCcccccCcchHHhhcc-------CC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (363)
                      .+++++||||+|+||+++++.|+++|++|++++|+.+......    ..........+|+.|.+++.++++       ++
T Consensus       370 ~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i  449 (657)
T PRK07201        370 VGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGHV  449 (657)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            3568999999999999999999999999999999876543321    111112244689999988877665       58


Q ss_pred             CEEEEccCCCCCCCC-----ChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcch
Q 017977          118 TAVVNLAGTPIGTRW-----SSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDY  190 (363)
Q Consensus       118 d~Vi~~a~~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~  190 (363)
                      |+|||+||.......     ..+..+..+++|+.++.++++++...  ..+..++|++||. +.+..      .+..+.|
T Consensus       450 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~-~~~~~------~~~~~~Y  522 (657)
T PRK07201        450 DYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSI-GVQTN------APRFSAY  522 (657)
T ss_pred             CEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECCh-hhcCC------CCCcchH
Confidence            999999996422111     12456788999999988887776432  1456789999998 43321      2233456


Q ss_pred             hhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHH
Q 017977          191 CAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIV  270 (363)
Q Consensus       191 ~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  270 (363)
                      ..+|.+...+.++  +..+     +. ..|+.+++++||.+..+.......            .    .....+..+++|
T Consensus       523 ~~sK~a~~~~~~~--la~e-----~~-~~~i~v~~v~pg~v~T~~~~~~~~------------~----~~~~~~~~~~~a  578 (657)
T PRK07201        523 VASKAALDAFSDV--AASE-----TL-SDGITFTTIHMPLVRTPMIAPTKR------------Y----NNVPTISPEEAA  578 (657)
T ss_pred             HHHHHHHHHHHHH--HHHH-----HH-hhCCcEEEEECCcCcccccCcccc------------c----cCCCCCCHHHHH
Confidence            6554333322211  0111     11 238999999999998764221100            0    011257899999


Q ss_pred             HHHHHHhcCC
Q 017977          271 NLIYEALSNP  280 (363)
Q Consensus       271 ~a~~~~~~~~  280 (363)
                      +.++..+.+.
T Consensus       579 ~~i~~~~~~~  588 (657)
T PRK07201        579 DMVVRAIVEK  588 (657)
T ss_pred             HHHHHHHHhC
Confidence            9999987653

>PRK05855 short chain dehydrogenase; Validated

Probab=99.57  E-value=7.4e-14  Score=136.37  Aligned_cols=214  Identities=15%  Similarity=0.027  Sum_probs=132.7

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccC----CCCCccccCcccccCcchHHhhcc-------C
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (363)
                      ...++++||||+|+||++++++|+++|++|++++|+..+.+...    ..........+|+.|.+++.++++       .
T Consensus       313 ~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~  392 (582)
T PRK05855        313 FSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGV  392 (582)
T ss_pred             CCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence            34568999999999999999999999999999999875543321    111112245689999988877664       4


Q ss_pred             CCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCC-CCCeEEEeccceecCCcccccccCCCcch
Q 017977          117 STAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLELVKPKYLMRAAHQEMITWLSDY  190 (363)
Q Consensus       117 ~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~-~~~~v~~SS~~~~yg~~~~~e~~~~~~~~  190 (363)
                      +|+||||||.....   ....+..+..+++|+.++.++.+++...  ..+ ..++|++||.+ .|.      ..+....|
T Consensus       393 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~-~~~------~~~~~~~Y  465 (582)
T PRK05855        393 PDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAA-AYA------PSRSLPAY  465 (582)
T ss_pred             CcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChh-hcc------CCCCCcHH
Confidence            79999999975432   2345566788999999999988876542  122 35799999983 332      11233456


Q ss_pred             hhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCccc--ch----HHHHHHHhCCCCCCCCCccccc
Q 017977          191 CAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALA--KM----IPLFMMFAGGPLGSGQQWFSWI  264 (363)
Q Consensus       191 ~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~--~~----~~~~~~~~~~~~~~~~~~~~~i  264 (363)
                      ..+|.+...+.+       .....+. ..|+++++++||.+-.+......  ..    ...........+     .....
T Consensus       466 ~~sKaa~~~~~~-------~l~~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~  532 (582)
T PRK05855        466 ATSKAAVLMLSE-------CLRAELA-AAGIGVTAICPGFVDTNIVATTRFAGADAEDEARRRGRADKLY-----QRRGY  532 (582)
T ss_pred             HHHHHHHHHHHH-------HHHHHhc-ccCcEEEEEEeCCCcccchhccccCCcccchhhhHHhhhhhhc-----cccCC
Confidence            555433222211       1111111 23899999999988665211100  00    000000000000     01135


Q ss_pred             cHHHHHHHHHHHhcCCC
Q 017977          265 HLDDIVNLIYEALSNPS  281 (363)
Q Consensus       265 ~v~D~a~a~~~~~~~~~  281 (363)
                      ..+|+|++++.++.++.
T Consensus       533 ~p~~va~~~~~~~~~~~  549 (582)
T PRK05855        533 GPEKVAKAIVDAVKRNK  549 (582)
T ss_pred             CHHHHHHHHHHHHHcCC
Confidence            68999999999998754

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.56  E-value=5.1e-13  Score=116.49  Aligned_cols=217  Identities=11%  Similarity=0.020  Sum_probs=128.5

Q ss_pred             CccEEEEecCcc--hHHHHHHHHHHhCCCEEEEEeCCCCc-----------c----cccCCCCCccccCcccccCcchHH
Q 017977           49 SQMTVSVTGATG--FIGRRLVQRLQADNHQVRVLTRSRSK-----------A----ELIFPGKKTRFFPGVMIAEEPQWR  111 (363)
Q Consensus        49 ~~~~vlVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~-----------~----~~~~~~~~~~~~~~~d~~~~~~~~  111 (363)
                      .+++|+||||+|  .||++++++|+++|++|++++|....           .    ..+...........+|+.+.+++.
T Consensus         5 ~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i~   84 (256)
T PRK12859          5 KNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDAPK   84 (256)
T ss_pred             CCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHH
Confidence            346899999995  89999999999999999988643210           0    011111111223457888888887


Q ss_pred             hhcc-------CCCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcc
Q 017977          112 DCIQ-------GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAA  179 (363)
Q Consensus       112 ~~~~-------~~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~  179 (363)
                      ++++       .+|+|||+||.....   ..+.+..+..+++|+.+...+..++.+.  ..+..++|++||..+..    
T Consensus        85 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----  160 (256)
T PRK12859         85 ELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQG----  160 (256)
T ss_pred             HHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCC----
Confidence            6664       479999999864332   2345566778999999988776555432  13445799999984311    


Q ss_pred             cccccCCCcchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCC
Q 017977          180 HQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQ  259 (363)
Q Consensus       180 ~~e~~~~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (363)
                         ..+....|..+|.+...+.+      .+..+ +. ..+++++.++|+.+-.+....  .....  .....++     
T Consensus       161 ---~~~~~~~Y~~sK~a~~~l~~------~la~~-~~-~~~i~v~~v~PG~i~t~~~~~--~~~~~--~~~~~~~-----  220 (256)
T PRK12859        161 ---PMVGELAYAATKGAIDALTS------SLAAE-VA-HLGITVNAINPGPTDTGWMTE--EIKQG--LLPMFPF-----  220 (256)
T ss_pred             ---CCCCchHHHHHHHHHHHHHH------HHHHH-hh-hhCeEEEEEEEccccCCCCCH--HHHHH--HHhcCCC-----
Confidence               12223345555433222211      11111 11 238999999999987653211  11111  1111111     


Q ss_pred             ccccccHHHHHHHHHHHhcCCC--CCc-eEEeeC
Q 017977          260 WFSWIHLDDIVNLIYEALSNPS--YRG-VINGTA  290 (363)
Q Consensus       260 ~~~~i~v~D~a~a~~~~~~~~~--~~g-~~~i~~  290 (363)
                       ..+...+|+|+++..++....  ..| .+.+.+
T Consensus       221 -~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dg  253 (256)
T PRK12859        221 -GRIGEPKDAARLIKFLASEEAEWITGQIIHSEG  253 (256)
T ss_pred             -CCCcCHHHHHHHHHHHhCccccCccCcEEEeCC
Confidence             125678999999999886543  345 444433

>PRK05599 hypothetical protein; Provisional

Probab=99.56  E-value=5.9e-14  Score=121.61  Aligned_cols=206  Identities=14%  Similarity=0.111  Sum_probs=128.0

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCccccc----CCCCC-ccccCcccccCcchHHhhcc-------CCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI----FPGKK-TRFFPGVMIAEEPQWRDCIQ-------GST  118 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~~-~~~~~~~d~~~~~~~~~~~~-------~~d  118 (363)
                      |+++||||++.||++++++|. +|++|++++|+.++.+..    ..... ......+|+.|.++++++++       .+|
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id   79 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS   79 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence            579999999999999999998 599999999987654332    11111 12245689999887776543       589


Q ss_pred             EEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCC-CCCeEEEeccceecCCcccccccCCCcchhh
Q 017977          119 AVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLELVKPKYLMRAAHQEMITWLSDYCA  192 (363)
Q Consensus       119 ~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~-~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~  192 (363)
                      ++||+||.....   ........+++++|+.+...++.++.+.  ..+ ..++|++||..+..+       .+....|..
T Consensus        80 ~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~-------~~~~~~Y~a  152 (246)
T PRK05599         80 LAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRA-------RRANYVYGS  152 (246)
T ss_pred             EEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccC-------CcCCcchhh
Confidence            999999974321   1223334456778888876665544321  022 357999999844222       223345666


Q ss_pred             hhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHH
Q 017977          193 KVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL  272 (363)
Q Consensus       193 ~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a  272 (363)
                      +|.+...|.++      +.. .+. ..|+.++.+.||.+..+.....            .+    . . -....+|+|++
T Consensus       153 sKaa~~~~~~~------la~-el~-~~~I~v~~v~PG~v~T~~~~~~------------~~----~-~-~~~~pe~~a~~  206 (246)
T PRK05599        153 TKAGLDAFCQG------LAD-SLH-GSHVRLIIARPGFVIGSMTTGM------------KP----A-P-MSVYPRDVAAA  206 (246)
T ss_pred             HHHHHHHHHHH------HHH-Hhc-CCCceEEEecCCcccchhhcCC------------CC----C-C-CCCCHHHHHHH
Confidence            65443333221      111 111 2389999999999876521100            00    0 0 02578999999


Q ss_pred             HHHHhcCCCCCceEEeeC
Q 017977          273 IYEALSNPSYRGVINGTA  290 (363)
Q Consensus       273 ~~~~~~~~~~~g~~~i~~  290 (363)
                      ++.++.+....+.+.+..
T Consensus       207 ~~~~~~~~~~~~~~~~~~  224 (246)
T PRK05599        207 VVSAITSSKRSTTLWIPG  224 (246)
T ss_pred             HHHHHhcCCCCceEEeCc
Confidence            999998765444555554

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.55  E-value=1.7e-13  Score=129.36  Aligned_cols=220  Identities=13%  Similarity=0.022  Sum_probs=134.0

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcc--cccCCCCCccccCcccccCcchHHhhcc-------CCCE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA--ELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTA  119 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~  119 (363)
                      ..++++||||+|+||+.+++.|.++|++|++++|.....  ........ .....+|+.|.+++..+++       ++|+
T Consensus       209 ~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~-~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~  287 (450)
T PRK08261        209 AGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVG-GTALALDITAPDAPARIAEHLAERHGGLDI  287 (450)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcC-CeEEEEeCCCHHHHHHHHHHHHHhCCCCCE
Confidence            346899999999999999999999999999999854321  11111111 1144579998887766554       5899


Q ss_pred             EEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhhh
Q 017977          120 VVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKV  194 (363)
Q Consensus       120 Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~  194 (363)
                      |||+||.....   ..+.+..+..+++|+.++.++.+++...  .....++|++||.+++++       .+....|...|
T Consensus       288 vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g-------~~~~~~Y~asK  360 (450)
T PRK08261        288 VVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAG-------NRGQTNYAASK  360 (450)
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCC-------CCCChHHHHHH
Confidence            99999974332   2345567788999999999999999762  123367999999855443       12233555554


Q ss_pred             hhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHHH
Q 017977          195 YCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY  274 (363)
Q Consensus       195 ~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~  274 (363)
                      .....|.+      .+.. .+. ..++.+..+.|+.+-.+............. ..-.++.      .....+|+++++.
T Consensus       361 aal~~~~~------~la~-el~-~~gi~v~~v~PG~i~t~~~~~~~~~~~~~~-~~~~~l~------~~~~p~dva~~~~  425 (450)
T PRK08261        361 AGVIGLVQ------ALAP-LLA-ERGITINAVAPGFIETQMTAAIPFATREAG-RRMNSLQ------QGGLPVDVAETIA  425 (450)
T ss_pred             HHHHHHHH------HHHH-HHh-hhCcEEEEEEeCcCcchhhhccchhHHHHH-hhcCCcC------CCCCHHHHHHHHH
Confidence            32222221      1111 111 238999999999875432111100000000 0001111      1245789999999


Q ss_pred             HHhcCCC--CCc-eEEeeCC
Q 017977          275 EALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       275 ~~~~~~~--~~g-~~~i~~~  291 (363)
                      .+++...  ..| ++.++++
T Consensus       426 ~l~s~~~~~itG~~i~v~g~  445 (450)
T PRK08261        426 WLASPASGGVTGNVVRVCGQ  445 (450)
T ss_pred             HHhChhhcCCCCCEEEECCC
Confidence            9886433  345 6666553

>PRK06484 short chain dehydrogenase; Validated

Probab=99.55  E-value=1.6e-13  Score=132.12  Aligned_cols=210  Identities=19%  Similarity=0.149  Sum_probs=133.0

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCC-CCccccCcccccCcchHHhhcc-------CCCEEE
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV  121 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~d~Vi  121 (363)
                      .++++||||++.||+++++.|+++|++|++++|+.+........ ........+|+.+.+++.++++       ++|++|
T Consensus         5 ~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~li   84 (520)
T PRK06484          5 SRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDVLV   84 (520)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCEEE
Confidence            46899999999999999999999999999999987664433221 1112245689999888776654       589999


Q ss_pred             EccCCCCC-----CCCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCC-CCeEEEeccceecCCcccccccCCCcchhhh
Q 017977          122 NLAGTPIG-----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGV-RPSVLELVKPKYLMRAAHQEMITWLSDYCAK  193 (363)
Q Consensus       122 ~~a~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~-~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~  193 (363)
                      |+||....     ...+.+..+..+++|+.++..+++++.+.  ..+. .++|++||..+.++       .+....|..+
T Consensus        85 ~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~-------~~~~~~Y~as  157 (520)
T PRK06484         85 NNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVA-------LPKRTAYSAS  157 (520)
T ss_pred             ECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCC-------CCCCchHHHH
Confidence            99986211     13345667889999999999988888763  1222 37999999854332       2223456655


Q ss_pred             hhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccc--hHHHHHHHhCCCCCCCCCccccccHHHHHH
Q 017977          194 VYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAK--MIPLFMMFAGGPLGSGQQWFSWIHLDDIVN  271 (363)
Q Consensus       194 ~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  271 (363)
                      |.+...+.++  +.    .+ +. ..+++++.++|+.+..+.......  ...........+.      ..+...+|+++
T Consensus       158 Kaal~~l~~~--la----~e-~~-~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~va~  223 (520)
T PRK06484        158 KAAVISLTRS--LA----CE-WA-AKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRSRIPL------GRLGRPEEIAE  223 (520)
T ss_pred             HHHHHHHHHH--HH----HH-hh-hhCeEEEEEccCCcCchhhhhhcccchhhhHHHHhcCCC------CCCcCHHHHHH
Confidence            4433333221  01    11 11 238999999999886653211000  0000000111111      12567899999


Q ss_pred             HHHHHhcCC
Q 017977          272 LIYEALSNP  280 (363)
Q Consensus       272 a~~~~~~~~  280 (363)
                      ++..++...
T Consensus       224 ~v~~l~~~~  232 (520)
T PRK06484        224 AVFFLASDQ  232 (520)
T ss_pred             HHHHHhCcc
Confidence            999888753

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=99.54  E-value=7e-13  Score=104.59  Aligned_cols=217  Identities=18%  Similarity=0.179  Sum_probs=148.2

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCccccc---CCCCCccccCcccccCcchHHhhcc-------CCCEE
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI---FPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAV  120 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~V  120 (363)
                      +.++||||+..||++++..|.+.|++|.+.+++....+..   ++.........+|+.+.++.+..++       .++++
T Consensus        15 k~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~psvl   94 (256)
T KOG1200|consen   15 KVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPSVL   94 (256)
T ss_pred             ceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCCcEE
Confidence            5799999999999999999999999999999988654432   1221122244578887776655443       57999


Q ss_pred             EEccCCCCC---CCCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCC--CCeEEEeccceecCCcccccccCCCcchhhh
Q 017977          121 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGV--RPSVLELVKPKYLMRAAHQEMITWLSDYCAK  193 (363)
Q Consensus       121 i~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~--~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~  193 (363)
                      ++|||..-+   .+..++.++..+.+|+.|.....+++.+.  ..+.  -.+|.+||.-+..|       ......|.++
T Consensus        95 VncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiG-------N~GQtnYAAs  167 (256)
T KOG1200|consen   95 VNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIG-------NFGQTNYAAS  167 (256)
T ss_pred             EEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccc-------cccchhhhhh
Confidence            999998755   34567888999999999988777776653  1222  26999998854333       2234578888


Q ss_pred             hhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHH--HHHhCCCCCCCCCccccccHHHHHH
Q 017977          194 VYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPLGSGQQWFSWIHLDDIVN  271 (363)
Q Consensus       194 ~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~v~D~a~  271 (363)
                      |.....|+++  ++.+...      .++++..+.||+|-.|....   +-+..  .+....|.+.      +=..+|+|.
T Consensus       168 K~GvIgftkt--aArEla~------knIrvN~VlPGFI~tpMT~~---mp~~v~~ki~~~iPmgr------~G~~EevA~  230 (256)
T KOG1200|consen  168 KGGVIGFTKT--AARELAR------KNIRVNVVLPGFIATPMTEA---MPPKVLDKILGMIPMGR------LGEAEEVAN  230 (256)
T ss_pred             cCceeeeeHH--HHHHHhh------cCceEeEeccccccChhhhh---cCHHHHHHHHccCCccc------cCCHHHHHH
Confidence            8777777754  2222222      38999999999998875322   11111  3333344432      455899999


Q ss_pred             HHHHHhcCCC--CCc-eEEeeCC
Q 017977          272 LIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       272 a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      .+..+.....  ..| .+.+.+|
T Consensus       231 ~V~fLAS~~ssYiTG~t~evtGG  253 (256)
T KOG1200|consen  231 LVLFLASDASSYITGTTLEVTGG  253 (256)
T ss_pred             HHHHHhccccccccceeEEEecc
Confidence            9998886544  233 7777665

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.53  E-value=4.8e-13  Score=120.10  Aligned_cols=229  Identities=13%  Similarity=0.034  Sum_probs=133.6

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCC-CEEEEEeCCCCcccccCC----CCCccccCcccccCcchHHhhc-------cCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCI-------QGS  117 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~-------~~~  117 (363)
                      +++++||||++.||+++++.|+++| ++|++++|+..+......    .........+|+.+.+++++++       .++
T Consensus         3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   82 (314)
T TIGR01289         3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPL   82 (314)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            3589999999999999999999999 999999998765432211    1111123457998888776554       358


Q ss_pred             CEEEEccCCCCC----CCCChhhHHHHHHHHHHHHHHHHHHHHhC-C-CC--CCCeEEEeccceecC---C---cccccc
Q 017977          118 TAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES-P-EG--VRPSVLELVKPKYLM---R---AAHQEM  183 (363)
Q Consensus       118 d~Vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~~--~~~~v~~SS~~~~yg---~---~~~~e~  183 (363)
                      |++||+||....    ...+.+..+..+++|+.++..+++++... . .+  ..++|++||..+...   .   .+.+..
T Consensus        83 D~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~  162 (314)
T TIGR01289        83 DALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKANLG  162 (314)
T ss_pred             CEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCccccc
Confidence            999999996322    12345567888999999988776665543 1 21  358999999843211   0   000000


Q ss_pred             cCC--------------CcchhhhhhhcccchhhHHHHHHHHHHHhcc---CCCceEEEEeeceEEeCCC-CcccchH-H
Q 017977          184 ITW--------------LSDYCAKVYCLVSFNRGVLVCREWEGTALKV---NKDVRLALIRIGIVLGKDG-GALAKMI-P  244 (363)
Q Consensus       184 ~~~--------------~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~---~~~~~~~ilRp~~v~g~~~-~~~~~~~-~  244 (363)
                      +..              ...|    .....|..+|.....+.......   ..++.++.++||.|..... ....... .
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~----~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~~~~~~~  238 (314)
T TIGR01289       163 DLSGLAAGFKAPIAMIDGKEF----KGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHVPLFRT  238 (314)
T ss_pred             ccccccccCCCcccccCCCCc----chhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccccHHHHH
Confidence            000              0011    11234666665433332222221   2379999999999853322 1111111 1


Q ss_pred             HHHHHhCCCCCCCCCccccccHHHHHHHHHHHhcCCC--CCceEEe
Q 017977          245 LFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS--YRGVING  288 (363)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~--~~g~~~i  288 (363)
                      .+.......      ...+..+++.|+.++.++....  .+|.|.-
T Consensus       239 ~~~~~~~~~------~~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~  278 (314)
T TIGR01289       239 LFPPFQKYI------TKGYVSEEEAGERLAQVVSDPKLKKSGVYWS  278 (314)
T ss_pred             HHHHHHHHH------hccccchhhhhhhhHHhhcCcccCCCceeee
Confidence            111000000      0125679999999998886543  3455554

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.50  E-value=2.8e-13  Score=111.03  Aligned_cols=161  Identities=15%  Similarity=0.078  Sum_probs=107.6

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCC-EEEEEeCCCCccccc-------CCCCCccccCcccccCcchHHhhcc-------
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELI-------FPGKKTRFFPGVMIAEEPQWRDCIQ-------  115 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~-------~~~~~~~~~~~~d~~~~~~~~~~~~-------  115 (363)
                      ++++||||+|++|.+++++|+++|+ .|+.+.|+.......       ...........+|+.+.+++.++++       
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG   80 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            3799999999999999999999986 688888876543211       1111111234578888777766554       


Q ss_pred             CCCEEEEccCCCCC---CCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhh
Q 017977          116 GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCA  192 (363)
Q Consensus       116 ~~d~Vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~  192 (363)
                      .+|.|||+++....   .....+..+..++.|+.++.++++++..  .+.+++|++||.++.++       .+....|..
T Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~ii~~ss~~~~~~-------~~~~~~y~~  151 (180)
T smart00822       81 PLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRD--LPLDFFVLFSSVAGVLG-------NPGQANYAA  151 (180)
T ss_pred             CeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhcc--CCcceEEEEccHHHhcC-------CCCchhhHH
Confidence            46999999986422   2234455678899999999999999987  67788999998855444       122223433


Q ss_pred             hhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEE
Q 017977          193 KVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVL  232 (363)
Q Consensus       193 ~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~  232 (363)
                      +          |.....+. .... ..+++++.+.|+.+-
T Consensus       152 s----------k~~~~~~~-~~~~-~~~~~~~~~~~g~~~  179 (180)
T smart00822      152 A----------NAFLDALA-AHRR-ARGLPATSINWGAWA  179 (180)
T ss_pred             H----------HHHHHHHH-HHHH-hcCCceEEEeecccc
Confidence            3          32222222 2222 238889999888754

It uses NADPH to reduce the keto group to a hydroxy group.

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.48  E-value=6e-13  Score=118.73  Aligned_cols=215  Identities=13%  Similarity=-0.040  Sum_probs=126.2

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCc----------ccc----cCCCCCccccCcccccCcchHHhhc
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK----------AEL----IFPGKKTRFFPGVMIAEEPQWRDCI  114 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~----------~~~----~~~~~~~~~~~~~d~~~~~~~~~~~  114 (363)
                      ..++++||||++.||+++++.|++.|++|++++|+..+          ...    +...........+|+.|.+++++++
T Consensus         7 ~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~   86 (305)
T PRK08303          7 RGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRALV   86 (305)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence            34789999999999999999999999999999997532          111    1111111224568999988877665


Q ss_pred             c-------CCCEEEEcc-CCCC-----C--CCCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCC
Q 017977          115 Q-------GSTAVVNLA-GTPI-----G--TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMR  177 (363)
Q Consensus       115 ~-------~~d~Vi~~a-~~~~-----~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~  177 (363)
                      +       .+|++||+| +...     .  .....+.....+++|+.+...+++++.+.  ..+..++|++||..+.++.
T Consensus        87 ~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~~~~~  166 (305)
T PRK08303         87 ERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTAEYNA  166 (305)
T ss_pred             HHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCccccccC
Confidence            3       589999999 6310     1  11233455677889999988887777654  1334579999986332220


Q ss_pred             cccccccCCCcchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCC-cccchHHHH-HHHhCCCCC
Q 017977          178 AAHQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGG-ALAKMIPLF-MMFAGGPLG  255 (363)
Q Consensus       178 ~~~~e~~~~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~-~~~~~~~~~-~~~~~~~~~  255 (363)
                          ...+....|..+|.+...++++       ....+. ..|+.+..|.||.+-.+... ....--..+ ......+. 
T Consensus       167 ----~~~~~~~~Y~asKaal~~lt~~-------La~el~-~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~p~-  233 (305)
T PRK08303        167 ----THYRLSVFYDLAKTSVNRLAFS-------LAHELA-PHGATAVALTPGWLRSEMMLDAFGVTEENWRDALAKEPH-  233 (305)
T ss_pred             ----cCCCCcchhHHHHHHHHHHHHH-------HHHHhh-hcCcEEEEecCCccccHHHHHhhccCccchhhhhccccc-
Confidence                0011223465555443333221       111111 23899999999988654210 000000000 00000110 


Q ss_pred             CCCCccccccHHHHHHHHHHHhcCC
Q 017977          256 SGQQWFSWIHLDDIVNLIYEALSNP  280 (363)
Q Consensus       256 ~~~~~~~~i~v~D~a~a~~~~~~~~  280 (363)
                          ..-+...+|+|++++.++..+
T Consensus       234 ----~~~~~~peevA~~v~fL~s~~  254 (305)
T PRK08303        234 ----FAISETPRYVGRAVAALAADP  254 (305)
T ss_pred             ----cccCCCHHHHHHHHHHHHcCc
Confidence                112347999999999999765

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.47  E-value=4.7e-13  Score=116.73  Aligned_cols=205  Identities=13%  Similarity=0.018  Sum_probs=124.5

Q ss_pred             EEEEecCcchHHHHHHHHHHh----CCCEEEEEeCCCCcccccCC------CCCccccCcccccCcchHHhhccC-----
Q 017977           52 TVSVTGATGFIGRRLVQRLQA----DNHQVRVLTRSRSKAELIFP------GKKTRFFPGVMIAEEPQWRDCIQG-----  116 (363)
Q Consensus        52 ~vlVtGatG~iG~~l~~~L~~----~g~~V~~~~r~~~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~~-----  116 (363)
                      .++||||+|.||.+++++|++    .|++|++++|+....+....      .........+|+.+.+++.++++.     
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   81 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP   81 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence            589999999999999999997    79999999998765433211      011122446799998877765531     


Q ss_pred             ------CCEEEEccCCCCCC--C----CChhhHHHHHHHHHHHHHHHHHHHHhC-C-C-C-CCCeEEEeccceecCCccc
Q 017977          117 ------STAVVNLAGTPIGT--R----WSSEIKKEIKESRIRVTSKVVDLINES-P-E-G-VRPSVLELVKPKYLMRAAH  180 (363)
Q Consensus       117 ------~d~Vi~~a~~~~~~--~----~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~-~-~~~~v~~SS~~~~yg~~~~  180 (363)
                            .|+|||+||.....  .    ...+..+..+++|+.++..+.+++.+. . . + ..++|++||.++..+    
T Consensus        82 g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~----  157 (256)
T TIGR01500        82 RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQP----  157 (256)
T ss_pred             ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCC----
Confidence                  25899999863221  1    123456789999999988887776653 1 1 2 246999998843221    


Q ss_pred             ccccCCCcchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc------cchHHHHHHHhCCCC
Q 017977          181 QEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL------AKMIPLFMMFAGGPL  254 (363)
Q Consensus       181 ~e~~~~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~------~~~~~~~~~~~~~~~  254 (363)
                         .+....|..+|.+...+.++      +.. .+ ...++.++.+.||.+-.+.....      ......+.  ...+.
T Consensus       158 ---~~~~~~Y~asKaal~~l~~~------la~-e~-~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~--~~~~~  224 (256)
T TIGR01500       158 ---FKGWALYCAGKAARDMLFQV------LAL-EE-KNPNVRVLNYAPGVLDTDMQQQVREESVDPDMRKGLQ--ELKAK  224 (256)
T ss_pred             ---CCCchHHHHHHHHHHHHHHH------HHH-Hh-cCCCeEEEEecCCcccchHHHHHHHhcCChhHHHHHH--HHHhc
Confidence               12233455554332222211      111 11 12389999999999865521100      00111110  00111


Q ss_pred             CCCCCccccccHHHHHHHHHHHhcC
Q 017977          255 GSGQQWFSWIHLDDIVNLIYEALSN  279 (363)
Q Consensus       255 ~~~~~~~~~i~v~D~a~a~~~~~~~  279 (363)
                            -.+..++|+|++++.++++
T Consensus       225 ------~~~~~p~eva~~~~~l~~~  243 (256)
T TIGR01500       225 ------GKLVDPKVSAQKLLSLLEK  243 (256)
T ss_pred             ------CCCCCHHHHHHHHHHHHhc
Confidence                  1267899999999999964

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=99.47  E-value=8.9e-12  Score=110.33  Aligned_cols=222  Identities=12%  Similarity=0.013  Sum_probs=129.0

Q ss_pred             CCccEEEEecC--cchHHHHHHHHHHhCCCEEEEEeCCCCcccccC--------------CCCC---ccccCcccc--cC
Q 017977           48 ASQMTVSVTGA--TGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF--------------PGKK---TRFFPGVMI--AE  106 (363)
Q Consensus        48 ~~~~~vlVtGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------------~~~~---~~~~~~~d~--~~  106 (363)
                      ..+++++||||  +..||.++++.|.+.|.+|++ .|.....+...              ....   ......+|+  .+
T Consensus         7 l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   85 (303)
T PLN02730          7 LRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFDT   85 (303)
T ss_pred             CCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecCc
Confidence            45679999999  899999999999999999988 55433211110              0000   011334566  22


Q ss_pred             cc------------------hHHhhc-------cCCCEEEEccCCCC---C--CCCChhhHHHHHHHHHHHHHHHHHHHH
Q 017977          107 EP------------------QWRDCI-------QGSTAVVNLAGTPI---G--TRWSSEIKKEIKESRIRVTSKVVDLIN  156 (363)
Q Consensus       107 ~~------------------~~~~~~-------~~~d~Vi~~a~~~~---~--~~~~~~~~~~~~~~n~~~~~~l~~~~~  156 (363)
                      .+                  ++.+++       ..+|++|||||...   .  ...+.+..+..+++|+.++..+++++.
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~~  165 (303)
T PLN02730         86 PEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFG  165 (303)
T ss_pred             cccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence            22                  444443       35899999996421   1  234556778899999999999988887


Q ss_pred             hC-CCCCCCeEEEeccceecCCcccccccCCC-cchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeC
Q 017977          157 ES-PEGVRPSVLELVKPKYLMRAAHQEMITWL-SDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGK  234 (363)
Q Consensus       157 ~~-~~~~~~~v~~SS~~~~yg~~~~~e~~~~~-~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~  234 (363)
                      +. ..+ .++|++||..+..+       .+.. ..|..+|.+...+.++       ....+....|+++..|.||.+-.+
T Consensus       166 p~m~~~-G~II~isS~a~~~~-------~p~~~~~Y~asKaAl~~l~~~-------la~El~~~~gIrVn~V~PG~v~T~  230 (303)
T PLN02730        166 PIMNPG-GASISLTYIASERI-------IPGYGGGMSSAKAALESDTRV-------LAFEAGRKYKIRVNTISAGPLGSR  230 (303)
T ss_pred             HHHhcC-CEEEEEechhhcCC-------CCCCchhhHHHHHHHHHHHHH-------HHHHhCcCCCeEEEEEeeCCccCc
Confidence            74 223 57999998743211       1211 2355554333222211       111111114899999999998766


Q ss_pred             CCCcccchHHHHHH-HhCCCCCCCCCccccccHHHHHHHHHHHhcCCC--CCc-eEEeeCC
Q 017977          235 DGGALAKMIPLFMM-FAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       235 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      ........-..... ....++      ..+...+|++.+++.++....  ..| .+.+.++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~pl------~r~~~peevA~~~~fLaS~~a~~itG~~l~vdGG  285 (303)
T PLN02730        231 AAKAIGFIDDMIEYSYANAPL------QKELTADEVGNAAAFLASPLASAITGATIYVDNG  285 (303)
T ss_pred             hhhcccccHHHHHHHHhcCCC------CCCcCHHHHHHHHHHHhCccccCccCCEEEECCC
Confidence            32211000011111 111121      125679999999999997543  344 5555444

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=99.47  E-value=6.1e-13  Score=105.97  Aligned_cols=170  Identities=14%  Similarity=0.121  Sum_probs=119.8

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc-------CCCEEEE
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVVN  122 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~Vi~  122 (363)
                      +.+||||||+..||..|+++|.+.|.+|++..|+.....+............+|+.|.++.+++++       ..+++||
T Consensus         5 gnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvliN   84 (245)
T COG3967           5 GNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVLIN   84 (245)
T ss_pred             CcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchheeee
Confidence            458999999999999999999999999999999998876655443333344589999887776653       5799999


Q ss_pred             ccCCCCCCCCC-----hhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhhhh
Q 017977          123 LAGTPIGTRWS-----SEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVY  195 (363)
Q Consensus       123 ~a~~~~~~~~~-----~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~  195 (363)
                      |||.....+..     .+..++-+++|+.++.+|..++..+  +.....+|.+||.-+.-+       ....|.|+++|-
T Consensus        85 NAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvP-------m~~~PvYcaTKA  157 (245)
T COG3967          85 NAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVP-------MASTPVYCATKA  157 (245)
T ss_pred             cccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCc-------ccccccchhhHH
Confidence            99986443222     2334567789999998888777764  234455888888732111       123457888876


Q ss_pred             hcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeC
Q 017977          196 CLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGK  234 (363)
Q Consensus       196 ~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~  234 (363)
                      +...|+.+       .++.... .++.+.-+-|+.|-.+
T Consensus       158 aiHsyt~a-------LR~Qlk~-t~veVIE~~PP~V~t~  188 (245)
T COG3967         158 AIHSYTLA-------LREQLKD-TSVEVIELAPPLVDTT  188 (245)
T ss_pred             HHHHHHHH-------HHHHhhh-cceEEEEecCCceecC
Confidence            65555431       1222222 2799999999998875

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=99.47  E-value=7.6e-13  Score=107.08  Aligned_cols=204  Identities=19%  Similarity=0.181  Sum_probs=139.2

Q ss_pred             EEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCCCCCCC
Q 017977           52 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGTR  131 (363)
Q Consensus        52 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~~~~~~  131 (363)
                      ++++.|+.||.|+++++.....++.|-.+.|+..+...... ..-..+..++....+-+...+.+...++-+++..    
T Consensus        54 ~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~k~~l~sw-~~~vswh~gnsfssn~~k~~l~g~t~v~e~~ggf----  128 (283)
T KOG4288|consen   54 WTLVLGGNPFSGSEVLKNATNVVHSVGILSENENKQTLSSW-PTYVSWHRGNSFSSNPNKLKLSGPTFVYEMMGGF----  128 (283)
T ss_pred             HHhhhcCCCcchHHHHHHHHhhceeeeEeecccCcchhhCC-CcccchhhccccccCcchhhhcCCcccHHHhcCc----
Confidence            68999999999999999999999999999999764322211 1111245566666666777788899999888752    


Q ss_pred             CChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCC--cchhhhhhhcccchhhHHHHHH
Q 017977          132 WSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWL--SDYCAKVYCLVSFNRGVLVCRE  209 (363)
Q Consensus       132 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~--~~~~~~~~~~~~y~~~k~~~~~  209 (363)
                         .+...+...|-....+.++++.+  .++++|||+|..  .||       .++.  .-|...             +++
T Consensus       129 ---gn~~~m~~ing~ani~a~kaa~~--~gv~~fvyISa~--d~~-------~~~~i~rGY~~g-------------KR~  181 (283)
T KOG4288|consen  129 ---GNIILMDRINGTANINAVKAAAK--AGVPRFVYISAH--DFG-------LPPLIPRGYIEG-------------KRE  181 (283)
T ss_pred             ---cchHHHHHhccHhhHHHHHHHHH--cCCceEEEEEhh--hcC-------CCCccchhhhcc-------------chH
Confidence               23456777888888899999999  899999999975  222       1211  123333             355


Q ss_pred             HHHHHhccCCCceEEEEeeceEEeCCC--Ccc------cchHHHHHHHhCCCC----CCCCCccccccHHHHHHHHHHHh
Q 017977          210 WEGTALKVNKDVRLALIRIGIVLGKDG--GAL------AKMIPLFMMFAGGPL----GSGQQWFSWIHLDDIVNLIYEAL  277 (363)
Q Consensus       210 ~~~~~~~~~~~~~~~ilRp~~v~g~~~--~~~------~~~~~~~~~~~~~~~----~~~~~~~~~i~v~D~a~a~~~~~  277 (363)
                      .|.+..... +..-+++|||++||...  +..      ...+........+++    --+......+.++++|.+.+.++
T Consensus       182 AE~Ell~~~-~~rgiilRPGFiyg~R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg~l~~ppvnve~VA~aal~ai  260 (283)
T KOG4288|consen  182 AEAELLKKF-RFRGIILRPGFIYGTRNVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLGPLLAPPVNVESVALAALKAI  260 (283)
T ss_pred             HHHHHHHhc-CCCceeeccceeecccccCcccccHHhhhhhHHHHHHhhhchhhcCcccccccCCCcCHHHHHHHHHHhc
Confidence            566665554 68999999999999843  111      111111111111121    23344567899999999999999


Q ss_pred             cCCCCCceEEe
Q 017977          278 SNPSYRGVING  288 (363)
Q Consensus       278 ~~~~~~g~~~i  288 (363)
                      ++++..|++.+
T Consensus       261 ~dp~f~Gvv~i  271 (283)
T KOG4288|consen  261 EDPDFKGVVTI  271 (283)
T ss_pred             cCCCcCceeeH
Confidence            99986665543

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=99.46  E-value=5.3e-12  Score=109.74  Aligned_cols=226  Identities=15%  Similarity=0.050  Sum_probs=139.8

Q ss_pred             CCCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCC-------CCccccCcccccCcchHHhhc-----
Q 017977           47 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-------KKTRFFPGVMIAEEPQWRDCI-----  114 (363)
Q Consensus        47 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-------~~~~~~~~~d~~~~~~~~~~~-----  114 (363)
                      ...++.++||||+..||++++.+|.+.|.+|++.+|+.+........       ........+|+.+.++.++++     
T Consensus         5 ~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~   84 (270)
T KOG0725|consen    5 RLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVE   84 (270)
T ss_pred             cCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHH
Confidence            34567999999999999999999999999999999998764322111       111223457888776555443     


Q ss_pred             ---cCCCEEEEccCCCCC----CCCChhhHHHHHHHHHH-HHHHHHHHHHhC--CCCCCCeEEEeccceecCCccccccc
Q 017977          115 ---QGSTAVVNLAGTPIG----TRWSSEIKKEIKESRIR-VTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMI  184 (363)
Q Consensus       115 ---~~~d~Vi~~a~~~~~----~~~~~~~~~~~~~~n~~-~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~  184 (363)
                         .++|++||+||....    .+.+++..+.++++|+. +...+..++..+  ..+...++++||.++..+       .
T Consensus        85 ~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~-------~  157 (270)
T KOG0725|consen   85 KFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGP-------G  157 (270)
T ss_pred             HhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccC-------C
Confidence               358999999997543    34567778899999999 466666666654  234555777777743211       1


Q ss_pred             CCC-cchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCC--CcccchHHHHHHH--hCCCCCCCCC
Q 017977          185 TWL-SDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDG--GALAKMIPLFMMF--AGGPLGSGQQ  259 (363)
Q Consensus       185 ~~~-~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~--~~~~~~~~~~~~~--~~~~~~~~~~  259 (363)
                      +.. ..|..+|.+...++++  ++.++..      .|+++..+-||.+..+..  .........+...  ....+.    
T Consensus       158 ~~~~~~Y~~sK~al~~ltr~--lA~El~~------~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~p----  225 (270)
T KOG0725|consen  158 PGSGVAYGVSKAALLQLTRS--LAKELAK------HGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKGAVP----  225 (270)
T ss_pred             CCCcccchhHHHHHHHHHHH--HHHHHhh------cCcEEEEeecCcEeCCccccccccchhhHHhhhhccccccc----
Confidence            122 4566665544444332  1222222      489999999999988751  1111111111111  111111    


Q ss_pred             ccccccHHHHHHHHHHHhcCCC--CCc-eEEeeCC
Q 017977          260 WFSWIHLDDIVNLIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       260 ~~~~i~v~D~a~a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      .-.+...+|++.++..++....  ..| .+.+.++
T Consensus       226 ~gr~g~~~eva~~~~fla~~~asyitG~~i~vdgG  260 (270)
T KOG0725|consen  226 LGRVGTPEEVAEAAAFLASDDASYITGQTIIVDGG  260 (270)
T ss_pred             cCCccCHHHHHHhHHhhcCcccccccCCEEEEeCC
Confidence            1136779999999998887653  333 5555544

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.44  E-value=1.8e-12  Score=110.68  Aligned_cols=167  Identities=11%  Similarity=0.026  Sum_probs=106.9

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccC----CCCCccccCcccccCcchHHhhc-------c-CC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCI-------Q-GS  117 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~-------~-~~  117 (363)
                      +++++||||++.||+++++.|+++|++|+++.|+.+..+...    ..........+|+.+.+++.+++       . .+
T Consensus         5 ~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~i   84 (227)
T PRK08862          5 SSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRAP   84 (227)
T ss_pred             CeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence            468999999999999999999999999999999886643321    11111223457888888776554       3 58


Q ss_pred             CEEEEccCCCCC-C---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCC-CCCeEEEeccceecCCcccccccCCCcch
Q 017977          118 TAVVNLAGTPIG-T---RWSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLELVKPKYLMRAAHQEMITWLSDY  190 (363)
Q Consensus       118 d~Vi~~a~~~~~-~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~-~~~~v~~SS~~~~yg~~~~~e~~~~~~~~  190 (363)
                      |++||+||.... .   ..+.+.....+++|+.++..+++++.+.  ..+ ...+|++||..+          .+....|
T Consensus        85 D~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~----------~~~~~~Y  154 (227)
T PRK08862         85 DVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDD----------HQDLTGV  154 (227)
T ss_pred             CEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCC----------CCCcchh
Confidence            999999974221 1   1233344556777888877665554432  122 357999998621          1223456


Q ss_pred             hhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeC
Q 017977          191 CAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGK  234 (363)
Q Consensus       191 ~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~  234 (363)
                      ..+|.+...|.++  +..+     +. ..++++..|.||.+-.+
T Consensus       155 ~asKaal~~~~~~--la~e-----l~-~~~Irvn~v~PG~i~t~  190 (227)
T PRK08862        155 ESSNALVSGFTHS--WAKE-----LT-PFNIRVGGVVPSIFSAN  190 (227)
T ss_pred             HHHHHHHHHHHHH--HHHH-----Hh-hcCcEEEEEecCcCcCC
Confidence            6655443333321  1111     11 24899999999988776

>PLN00015 protochlorophyllide reductase

Probab=99.44  E-value=2.5e-12  Score=115.24  Aligned_cols=228  Identities=11%  Similarity=0.017  Sum_probs=130.6

Q ss_pred             EEecCcchHHHHHHHHHHhCC-CEEEEEeCCCCcccccCC----CCCccccCcccccCcchHHhhcc-------CCCEEE
Q 017977           54 SVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV  121 (363)
Q Consensus        54 lVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~d~Vi  121 (363)
                      +||||++.||.+++++|+++| ++|++++|+..+......    .........+|+.|.+++.++++       .+|++|
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI   80 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV   80 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence            699999999999999999999 999999998755432211    11112234679999888766553       579999


Q ss_pred             EccCCCCC----CCCChhhHHHHHHHHHHHHHHHHHHHHhC--CCC--CCCeEEEeccceecC----Ccc----cccc--
Q 017977          122 NLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEG--VRPSVLELVKPKYLM----RAA----HQEM--  183 (363)
Q Consensus       122 ~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~--~~~~v~~SS~~~~yg----~~~----~~e~--  183 (363)
                      |+||....    ...+.+..+..+++|+.++..+++++.+.  ..+  ..++|++||..+..+    ..+    ++.-  
T Consensus        81 nnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~  160 (308)
T PLN00015         81 CNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRG  160 (308)
T ss_pred             ECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhhhhh
Confidence            99996422    12345567789999999988776665543  133  357999999843211    000    0000  


Q ss_pred             ------cCCCcch--hhhhhhcccchhhHHHHHHHHHHHhcc---CCCceEEEEeeceEEeCCC-CcccchHHHH-HHHh
Q 017977          184 ------ITWLSDY--CAKVYCLVSFNRGVLVCREWEGTALKV---NKDVRLALIRIGIVLGKDG-GALAKMIPLF-MMFA  250 (363)
Q Consensus       184 ------~~~~~~~--~~~~~~~~~y~~~k~~~~~~~~~~~~~---~~~~~~~ilRp~~v~g~~~-~~~~~~~~~~-~~~~  250 (363)
                            ......+  .........|..+|.....+.......   ..|+.++.++||.|..... .......... ....
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~~~~~~~~~  240 (308)
T PLN00015        161 LAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFRLLFPPFQ  240 (308)
T ss_pred             hhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccccHHHHHHHHHHH
Confidence                  0000000  000012234777775533332222221   1389999999999954322 1111111100 0000


Q ss_pred             CCCCCCCCCccccccHHHHHHHHHHHhcCCC--CCceEE
Q 017977          251 GGPLGSGQQWFSWIHLDDIVNLIYEALSNPS--YRGVIN  287 (363)
Q Consensus       251 ~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~--~~g~~~  287 (363)
                      ..+.      ..+..+++.|+.++.++....  ..|.|.
T Consensus       241 ~~~~------~~~~~pe~~a~~~~~l~~~~~~~~~G~~~  273 (308)
T PLN00015        241 KYIT------KGYVSEEEAGKRLAQVVSDPSLTKSGVYW  273 (308)
T ss_pred             HHHh------cccccHHHhhhhhhhhccccccCCCcccc
Confidence            0000      124678999999998886543  345443

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.42  E-value=6.4e-12  Score=107.30  Aligned_cols=168  Identities=18%  Similarity=0.175  Sum_probs=118.5

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCC--ccccCcccccCcchHHhhcc---------CC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKK--TRFFPGVMIAEEPQWRDCIQ---------GS  117 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~---------~~  117 (363)
                      +.+-|+|||+....|+.|+++|.++|+.|++-+-.++..+.+.....  .-.....|++++++++++.+         +.
T Consensus        28 ~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~gL  107 (322)
T KOG1610|consen   28 SDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGEDGL  107 (322)
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhcccccc
Confidence            34579999999999999999999999999999976665554433221  11133689999999987764         45


Q ss_pred             CEEEEccCCCCC---CCC-ChhhHHHHHHHHHHHHHHHHHHHHhC-CCCCCCeEEEeccceecCCcccccccCCCcchhh
Q 017977          118 TAVVNLAGTPIG---TRW-SSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCA  192 (363)
Q Consensus       118 d~Vi~~a~~~~~---~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~  192 (363)
                      -.||||||....   .+| ..+.....+++|+.|+.++..++..+ +....|+|++||.++       .-..|..-+|..
T Consensus       108 wglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~G-------R~~~p~~g~Y~~  180 (322)
T KOG1610|consen  108 WGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLG-------RVALPALGPYCV  180 (322)
T ss_pred             eeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEeccccc-------CccCcccccchh
Confidence            799999995422   233 34566888999999999988888877 455668999999854       233445556777


Q ss_pred             hhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceE
Q 017977          193 KVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIV  231 (363)
Q Consensus       193 ~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v  231 (363)
                      +|++...|.-+      ...+  ...+|+++.++-||.+
T Consensus       181 SK~aVeaf~D~------lR~E--L~~fGV~VsiiePG~f  211 (322)
T KOG1610|consen  181 SKFAVEAFSDS------LRRE--LRPFGVKVSIIEPGFF  211 (322)
T ss_pred             hHHHHHHHHHH------HHHH--HHhcCcEEEEeccCcc
Confidence            76554444321      1111  1124999999999943

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.41  E-value=2.6e-12  Score=113.35  Aligned_cols=226  Identities=14%  Similarity=0.021  Sum_probs=140.9

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCccccc----CCC--CCccccCcccccCcchHHhhcc------
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI----FPG--KKTRFFPGVMIAEEPQWRDCIQ------  115 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~--~~~~~~~~~d~~~~~~~~~~~~------  115 (363)
                      ...+.++|||||+.||.++++.|+++|.+|+..+|+.......    ...  .....+..+|+.+.+++..+.+      
T Consensus        33 ~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~  112 (314)
T KOG1208|consen   33 LSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKE  112 (314)
T ss_pred             CCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcC
Confidence            3346899999999999999999999999999999998553322    211  1112245689998888776553      


Q ss_pred             -CCCEEEEccCCCCCCC-CChhhHHHHHHHHHHHHHHHHHHHHhC-C-CCCCCeEEEeccceecCCcccccccCCC-cch
Q 017977          116 -GSTAVVNLAGTPIGTR-WSSEIKKEIKESRIRVTSKVVDLINES-P-EGVRPSVLELVKPKYLMRAAHQEMITWL-SDY  190 (363)
Q Consensus       116 -~~d~Vi~~a~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~~~~~~v~~SS~~~~yg~~~~~e~~~~~-~~~  190 (363)
                       ..|++|++||...... ...+..+..+.+|..|...+.+.+... + ....|+|++||..+ .....++.-.... ..|
T Consensus       113 ~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~-~~~~~~~~l~~~~~~~~  191 (314)
T KOG1208|consen  113 GPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILG-GGKIDLKDLSGEKAKLY  191 (314)
T ss_pred             CCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccc-cCccchhhccchhccCc
Confidence             5699999999865543 233456889999999977776666543 1 23378999999843 1111111111111 112


Q ss_pred             hhhhhhcccchhhHHHHHHHHHHHhccCC-CceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHH
Q 017977          191 CAKVYCLVSFNRGVLVCREWEGTALKVNK-DVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDI  269 (363)
Q Consensus       191 ~~~~~~~~~y~~~k~~~~~~~~~~~~~~~-~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  269 (363)
                      ...    ..|+.+|........+..+... |+.+..+.||.+.++.-.....+...+...-..++        +-..++.
T Consensus       192 ~~~----~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~l~r~~~~~~~l~~~l~~~~--------~ks~~~g  259 (314)
T KOG1208|consen  192 SSD----AAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTGLSRVNLLLRLLAKKLSWPL--------TKSPEQG  259 (314)
T ss_pred             cch----hHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCcccccceecchHHHHHHHHHHHHHh--------ccCHHHH
Confidence            221    1377777555445444444433 89999999999988754332222222211111110        1257788


Q ss_pred             HHHHHHHhcCCC---CCceE
Q 017977          270 VNLIYEALSNPS---YRGVI  286 (363)
Q Consensus       270 a~a~~~~~~~~~---~~g~~  286 (363)
                      |+..+.++.+++   ..|.|
T Consensus       260 a~t~~~~a~~p~~~~~sg~y  279 (314)
T KOG1208|consen  260 AATTCYAALSPELEGVSGKY  279 (314)
T ss_pred             hhheehhccCccccCccccc
Confidence            888888887775   34455

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.40  E-value=8.9e-13  Score=107.15  Aligned_cols=142  Identities=20%  Similarity=0.108  Sum_probs=101.4

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCC-CEEEEEeCC--CCccccc----CCCCCccccCcccccCcchHHhhcc-------C
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRS--RSKAELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~--~~~~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (363)
                      |+|+||||+|.||+.+++.|+++| +.|+++.|+  .+....+    ...........+|+.+.++++++++       .
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            479999999999999999999995 688888988  2222211    2122222344588888888776664       5


Q ss_pred             CCEEEEccCCCCCCCC---ChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhhh
Q 017977          117 STAVVNLAGTPIGTRW---SSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAK  193 (363)
Q Consensus       117 ~d~Vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~  193 (363)
                      +|++||++|.......   ..+..+..+++|+.+...+.+++..  .+..++|++||..+..+       .+....|..+
T Consensus        81 ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~--~~~g~iv~~sS~~~~~~-------~~~~~~Y~as  151 (167)
T PF00106_consen   81 LDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP--QGGGKIVNISSIAGVRG-------SPGMSAYSAS  151 (167)
T ss_dssp             ESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH--HTTEEEEEEEEGGGTSS-------STTBHHHHHH
T ss_pred             ccccccccccccccccccccchhhhhccccccceeeeeeehhee--ccccceEEecchhhccC-------CCCChhHHHH
Confidence            7999999998654222   2355678899999999999999998  66778999999865332       3444566666


Q ss_pred             hhhcccch
Q 017977          194 VYCLVSFN  201 (363)
Q Consensus       194 ~~~~~~y~  201 (363)
                      |.+...|.
T Consensus       152 kaal~~~~  159 (167)
T PF00106_consen  152 KAALRGLT  159 (167)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            55444443

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=99.40  E-value=6.7e-12  Score=101.80  Aligned_cols=217  Identities=13%  Similarity=0.059  Sum_probs=144.0

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccc---cCCC--CCccccCcccccCcchHHhhcc-------C
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL---IFPG--KKTRFFPGVMIAEEPQWRDCIQ-------G  116 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~~~--~~~~~~~~~d~~~~~~~~~~~~-------~  116 (363)
                      .++++++||+.|.||+.+.++|+++|..+.++..+.+..+.   +...  .....+..+|+++..++++.++       .
T Consensus         4 tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg~   83 (261)
T KOG4169|consen    4 TGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFGT   83 (261)
T ss_pred             cCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhCc
Confidence            35789999999999999999999999888888766554322   1111  1123366789999888877765       4


Q ss_pred             CCEEEEccCCCCCCCCChhhHHHHHHHHHHHH----HHHHHHHHhCCC-CCCCeEEEeccceecCCcccccccCCCcchh
Q 017977          117 STAVVNLAGTPIGTRWSSEIKKEIKESRIRVT----SKVVDLINESPE-GVRPSVLELVKPKYLMRAAHQEMITWLSDYC  191 (363)
Q Consensus       117 ~d~Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~----~~l~~~~~~~~~-~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~  191 (363)
                      +|++||.||..     .+.+.+..+.+|+.|.    ...+..+.+... ...-+|.+||..+.+       ..|..|.|.
T Consensus        84 iDIlINgAGi~-----~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~-------P~p~~pVY~  151 (261)
T KOG4169|consen   84 IDILINGAGIL-----DDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLD-------PMPVFPVYA  151 (261)
T ss_pred             eEEEEcccccc-----cchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccC-------ccccchhhh
Confidence            79999999974     4666888999998874    445666655311 122377888775433       356678999


Q ss_pred             hhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCC------CcccchHHHH-HHHhCCCCCCCCCccccc
Q 017977          192 AKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDG------GALAKMIPLF-MMFAGGPLGSGQQWFSWI  264 (363)
Q Consensus       192 ~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~------~~~~~~~~~~-~~~~~~~~~~~~~~~~~i  264 (363)
                      ++|.....|+||-     .....+.+ .|+.+..++|+.+-..-.      +.+-..-..+ ..++.         ..--
T Consensus       152 AsKaGVvgFTRSl-----a~~ayy~~-sGV~~~avCPG~t~t~l~~~~~~~~~~~e~~~~~~~~l~~---------~~~q  216 (261)
T KOG4169|consen  152 ASKAGVVGFTRSL-----ADLAYYQR-SGVRFNAVCPGFTRTDLAENIDASGGYLEYSDSIKEALER---------APKQ  216 (261)
T ss_pred             hcccceeeeehhh-----hhhhhHhh-cCEEEEEECCCcchHHHHHHHHhcCCcccccHHHHHHHHH---------cccC
Confidence            9999999999863     12223333 499999999998754311      1111111111 11111         1134


Q ss_pred             cHHHHHHHHHHHhcCCCCCceEEeeCCC
Q 017977          265 HLDDIVNLIYEALSNPSYRGVINGTAPN  292 (363)
Q Consensus       265 ~v~D~a~a~~~~~~~~~~~g~~~i~~~~  292 (363)
                      ...+++..++.+++.+..+.+|.+..+.
T Consensus       217 ~~~~~a~~~v~aiE~~~NGaiw~v~~g~  244 (261)
T KOG4169|consen  217 SPACCAINIVNAIEYPKNGAIWKVDSGS  244 (261)
T ss_pred             CHHHHHHHHHHHHhhccCCcEEEEecCc
Confidence            5789999999999986644477777664

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=99.38  E-value=1.8e-12  Score=100.63  Aligned_cols=157  Identities=18%  Similarity=0.148  Sum_probs=109.5

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCC--CEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      +++|.++|.||||-.|+.|++.+++.+  -+|+++.|+...........   ....+|+..-+++...+++.|+.|++.|
T Consensus        16 mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at~k~v---~q~~vDf~Kl~~~a~~~qg~dV~FcaLg   92 (238)
T KOG4039|consen   16 MQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPATDKVV---AQVEVDFSKLSQLATNEQGPDVLFCALG   92 (238)
T ss_pred             hhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCcccccee---eeEEechHHHHHHHhhhcCCceEEEeec
Confidence            345789999999999999999999988  49999999863322211111   1233566666777788889999999988


Q ss_pred             CCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhcccchhhHH
Q 017977          126 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRGVL  205 (363)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~~y~~~k~  205 (363)
                      .+-...    ..+.++.+.-.....+.+++++  .|+++|+.+||.++           .+.+.|...        .   
T Consensus        93 TTRgka----GadgfykvDhDyvl~~A~~AKe--~Gck~fvLvSS~GA-----------d~sSrFlY~--------k---  144 (238)
T KOG4039|consen   93 TTRGKA----GADGFYKVDHDYVLQLAQAAKE--KGCKTFVLVSSAGA-----------DPSSRFLYM--------K---  144 (238)
T ss_pred             cccccc----ccCceEeechHHHHHHHHHHHh--CCCeEEEEEeccCC-----------Ccccceeee--------e---
Confidence            643211    1234555556666688999999  89999999999953           222233211        1   


Q ss_pred             HHHHHHHHHhccCCCceEEEEeeceEEeCCC
Q 017977          206 VCREWEGTALKVNKDVRLALIRIGIVLGKDG  236 (363)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~  236 (363)
                      ++.+.++...... --+++|+|||.+.|...
T Consensus       145 ~KGEvE~~v~eL~-F~~~~i~RPG~ll~~R~  174 (238)
T KOG4039|consen  145 MKGEVERDVIELD-FKHIIILRPGPLLGERT  174 (238)
T ss_pred             ccchhhhhhhhcc-ccEEEEecCcceecccc
Confidence            4566666666554 34799999999999854

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.34  E-value=2.9e-10  Score=100.72  Aligned_cols=223  Identities=8%  Similarity=-0.041  Sum_probs=124.5

Q ss_pred             CccEEEEecCc--chHHHHHHHHHHhCCCEEEEEeCCC--------CcccccC-----CCCC-----ccccCcccccCcc
Q 017977           49 SQMTVSVTGAT--GFIGRRLVQRLQADNHQVRVLTRSR--------SKAELIF-----PGKK-----TRFFPGVMIAEEP  108 (363)
Q Consensus        49 ~~~~vlVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~--------~~~~~~~-----~~~~-----~~~~~~~d~~~~~  108 (363)
                      .+++++||||+  ..||+++++.|+++|++|++.++.+        .......     ....     .......|+.+.+
T Consensus         7 ~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~   86 (299)
T PRK06300          7 TGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFDTPE   86 (299)
T ss_pred             CCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhhhcCCCE
Confidence            45789999995  8999999999999999999976531        0000000     0000     0000112333332


Q ss_pred             ------------------hHHhhc-------cCCCEEEEccCCCC--C---CCCChhhHHHHHHHHHHHHHHHHHHHHhC
Q 017977          109 ------------------QWRDCI-------QGSTAVVNLAGTPI--G---TRWSSEIKKEIKESRIRVTSKVVDLINES  158 (363)
Q Consensus       109 ------------------~~~~~~-------~~~d~Vi~~a~~~~--~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  158 (363)
                                        ++++++       ..+|++||+||...  .   ...+.+..+..+++|+.+..++++++.+.
T Consensus        87 ~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~p~  166 (299)
T PRK06300         87 DVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGPI  166 (299)
T ss_pred             EeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence                              233333       35899999997532  1   23345667889999999999999998875


Q ss_pred             CCCCCCeEEEeccceecCCcccccccCCCc-chhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCC
Q 017977          159 PEGVRPSVLELVKPKYLMRAAHQEMITWLS-DYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGG  237 (363)
Q Consensus       159 ~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~-~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~  237 (363)
                      -....++|++||..+..+       .+... .|..+|.+...+.+       .....+....|+.+..|.||.+-.+...
T Consensus       167 m~~~G~ii~iss~~~~~~-------~p~~~~~Y~asKaAl~~lt~-------~la~el~~~~gIrVn~V~PG~v~T~~~~  232 (299)
T PRK06300        167 MNPGGSTISLTYLASMRA-------VPGYGGGMSSAKAALESDTK-------VLAWEAGRRWGIRVNTISAGPLASRAGK  232 (299)
T ss_pred             hhcCCeEEEEeehhhcCc-------CCCccHHHHHHHHHHHHHHH-------HHHHHhCCCCCeEEEEEEeCCccChhhh
Confidence            112245888887643221       12111 35555433222221       1111111113899999999998765321


Q ss_pred             cccchHHHHHHH-hCCCCCCCCCccccccHHHHHHHHHHHhcCCC--CCc-eEEeeCC
Q 017977          238 ALAKMIPLFMMF-AGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       238 ~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      ............ ...++      -.+...+|+++++.+++....  ..| ++.+.++
T Consensus       233 ~~~~~~~~~~~~~~~~p~------~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG  284 (299)
T PRK06300        233 AIGFIERMVDYYQDWAPL------PEPMEAEQVGAAAAFLVSPLASAITGETLYVDHG  284 (299)
T ss_pred             cccccHHHHHHHHhcCCC------CCCcCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence            110000111111 11121      125679999999999887543  344 5555544

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.33  E-value=2.9e-11  Score=103.10  Aligned_cols=205  Identities=17%  Similarity=0.132  Sum_probs=132.9

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCc------cccCcccccCcchHHhhcc-------CC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKT------RFFPGVMIAEEPQWRDCIQ-------GS  117 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~------~~~~~~d~~~~~~~~~~~~-------~~  117 (363)
                      .+|+|||++..+|..++.++..+|++|.++.|+..+..+.......      +.+..+|+.|.++....++       .+
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~  113 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPI  113 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCc
Confidence            4899999999999999999999999999999998775543322211      1244577877777766654       36


Q ss_pred             CEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC---CCCCCCeEEEeccceecCCcccccccCCCcchh
Q 017977          118 TAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES---PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYC  191 (363)
Q Consensus       118 d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~  191 (363)
                      |.+|||||.....   +.+.+.-+..+++|..++.+++.++...   +.+..+++++||..+.+|       -...+.|.
T Consensus       114 d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~-------i~GysaYs  186 (331)
T KOG1210|consen  114 DNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLG-------IYGYSAYS  186 (331)
T ss_pred             ceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcC-------cccccccc
Confidence            9999999986553   3445566778999999999998877653   122237888888865443       11122333


Q ss_pred             hhhhhcccchhhHHHHHHH-HHHHhcc-CCCceEEEEeeceEEeCCCCcccchHHHH-HHHhCCCCCCCCCccccccHHH
Q 017977          192 AKVYCLVSFNRGVLVCREW-EGTALKV-NKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDD  268 (363)
Q Consensus       192 ~~~~~~~~y~~~k~~~~~~-~~~~~~~-~~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D  268 (363)
                      .+          |+...-. +....+. .+++.++..-|+.+-.|+-..-+...|.. .+.++     +   -+.+.-++
T Consensus       187 ~s----------K~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~En~tkP~~t~ii~g-----~---ss~~~~e~  248 (331)
T KOG1210|consen  187 PS----------KFALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFERENKTKPEETKIIEG-----G---SSVIKCEE  248 (331)
T ss_pred             cH----------HHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCccccccccCchheeeecC-----C---CCCcCHHH
Confidence            33          2221111 1111111 23899999999988888543323333322 11111     1   23588999


Q ss_pred             HHHHHHHHhcCC
Q 017977          269 IVNLIYEALSNP  280 (363)
Q Consensus       269 ~a~a~~~~~~~~  280 (363)
                      +|.+++.-+.+.
T Consensus       249 ~a~~~~~~~~rg  260 (331)
T KOG1210|consen  249 MAKAIVKGMKRG  260 (331)
T ss_pred             HHHHHHhHHhhc
Confidence            999999877653

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.33  E-value=3.6e-12  Score=102.06  Aligned_cols=169  Identities=12%  Similarity=-0.013  Sum_probs=112.9

Q ss_pred             ccEEEEecC-cchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc--------CCCEE
Q 017977           50 QMTVSVTGA-TGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--------GSTAV  120 (363)
Q Consensus        50 ~~~vlVtGa-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--------~~d~V  120 (363)
                      .++|||||+ .|.||.+|+++|.+.|+.|++..|+.++...+...... ....+|+.+++++.+...        +.|.+
T Consensus         7 ~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl-~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L   85 (289)
T KOG1209|consen    7 PKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGL-KPYKLDVSKPEEVVTVSGEVRANPDGKLDLL   85 (289)
T ss_pred             CCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCC-eeEEeccCChHHHHHHHHHHhhCCCCceEEE
Confidence            368999886 69999999999999999999999999887665422110 023589998887766543        46999


Q ss_pred             EEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC-CCCCCCeEEEeccceecCCcccccccCCCcchhhhhhh
Q 017977          121 VNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYC  196 (363)
Q Consensus       121 i~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~  196 (363)
                      +|+||.+...   +.....-+..+++|+.|..+..+++... ......+|++.|..+ |-      ..|....|.++|.+
T Consensus        86 ~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~-~v------pfpf~~iYsAsKAA  158 (289)
T KOG1209|consen   86 YNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAG-VV------PFPFGSIYSASKAA  158 (289)
T ss_pred             EcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeE-Ee------ccchhhhhhHHHHH
Confidence            9999986442   2234456788999999988887777653 123445999999843 22      12334456665433


Q ss_pred             cccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeC
Q 017977          197 LVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGK  234 (363)
Q Consensus       197 ~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~  234 (363)
                      ...|+++        .......+|++++.+-+|.|-..
T Consensus       159 ihay~~t--------LrlEl~PFgv~Vin~itGGv~T~  188 (289)
T KOG1209|consen  159 IHAYART--------LRLELKPFGVRVINAITGGVATD  188 (289)
T ss_pred             HHHhhhh--------cEEeeeccccEEEEecccceecc
Confidence            2222211        01111224899999999888654

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.31  E-value=3e-11  Score=99.32  Aligned_cols=158  Identities=13%  Similarity=0.107  Sum_probs=101.7

Q ss_pred             EEEEecCcchHHHHHHHHHHhCC-CEEEEEeCCCCcc-------cccCCCCCccccCcccccCcchHHhhcc-------C
Q 017977           52 TVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKA-------ELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (363)
Q Consensus        52 ~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~-------~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (363)
                      +++||||+|.||..+++.|+++| .+|+++.|+....       ..+...........+|+.|.+++.++++       .
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~   81 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP   81 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence            58999999999999999999997 4899999993211       1122223333456789999999888774       4


Q ss_pred             CCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhhh
Q 017977          117 STAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAK  193 (363)
Q Consensus       117 ~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~  193 (363)
                      ++.|||+|+...+.   ..+.+..+..+..-+.++.+|.+++..  ...+.+|++||.++++|       .+....|...
T Consensus        82 i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~--~~l~~~i~~SSis~~~G-------~~gq~~YaaA  152 (181)
T PF08659_consen   82 IDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALEN--RPLDFFILFSSISSLLG-------GPGQSAYAAA  152 (181)
T ss_dssp             EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTT--TTTSEEEEEEEHHHHTT--------TTBHHHHHH
T ss_pred             cceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhc--CCCCeEEEECChhHhcc-------CcchHhHHHH
Confidence            58999999986442   234455667788899999999999988  78888999999977776       3344456543


Q ss_pred             hhhcccchhhHHHHHHHHHHHhccCCCceEEEEeece
Q 017977          194 VYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGI  230 (363)
Q Consensus       194 ~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~  230 (363)
                      +           ..........+. .|.+++.+.-+.
T Consensus       153 N-----------~~lda~a~~~~~-~g~~~~sI~wg~  177 (181)
T PF08659_consen  153 N-----------AFLDALARQRRS-RGLPAVSINWGA  177 (181)
T ss_dssp             H-----------HHHHHHHHHHHH-TTSEEEEEEE-E
T ss_pred             H-----------HHHHHHHHHHHh-CCCCEEEEEccc
Confidence            1           111222222222 388888887664

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=99.30  E-value=2.4e-12  Score=111.24  Aligned_cols=214  Identities=16%  Similarity=0.095  Sum_probs=132.4

Q ss_pred             cCc--chHHHHHHHHHHhCCCEEEEEeCCCCcc----cccCCCCCccccCcccccCcchHHhhc--------cCCCEEEE
Q 017977           57 GAT--GFIGRRLVQRLQADNHQVRVLTRSRSKA----ELIFPGKKTRFFPGVMIAEEPQWRDCI--------QGSTAVVN  122 (363)
Q Consensus        57 Gat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~----~~~~~~~~~~~~~~~d~~~~~~~~~~~--------~~~d~Vi~  122 (363)
                      |++  +.||+++++.|+++|++|++++|+..+.    ..+....... ...+|+.+.+++..++        ..+|++||
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~   79 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAE-VIQCDLSDEESVEALFDEAVERFGGRIDILVN   79 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSE-EEESCTTSHHHHHHHHHHHHHHHCSSESEEEE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCc-eEeecCcchHHHHHHHHHHHhhcCCCeEEEEe
Confidence            566  9999999999999999999999998762    2222211111 3568998888777663        46799999


Q ss_pred             ccCCCCC----CC---CChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhhhhh
Q 017977          123 LAGTPIG----TR---WSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVY  195 (363)
Q Consensus       123 ~a~~~~~----~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~  195 (363)
                      +++....    .+   .+.+.....+++|+.+...+++++.+.......+|++||.++       ....+....|...|.
T Consensus        80 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~-------~~~~~~~~~y~~sKa  152 (241)
T PF13561_consen   80 NAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAA-------QRPMPGYSAYSASKA  152 (241)
T ss_dssp             EEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGG-------TSBSTTTHHHHHHHH
T ss_pred             cccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhh-------cccCccchhhHHHHH
Confidence            9987543    11   234566788999999999888888653112356899998842       111222234554443


Q ss_pred             hcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHH-HHHhCCCCCCCCCccccccHHHHHHHHH
Q 017977          196 CLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIY  274 (363)
Q Consensus       196 ~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~a~~  274 (363)
                      +...+.+       .....+...+|+++..|.||.+..+........-... ......|++      .+...+|+|+++.
T Consensus       153 al~~l~r-------~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~~~~~~~pl~------r~~~~~evA~~v~  219 (241)
T PF13561_consen  153 ALEGLTR-------SLAKELAPKKGIRVNAVSPGPIETPMTERIPGNEEFLEELKKRIPLG------RLGTPEEVANAVL  219 (241)
T ss_dssp             HHHHHHH-------HHHHHHGGHGTEEEEEEEESSBSSHHHHHHHTHHHHHHHHHHHSTTS------SHBEHHHHHHHHH
T ss_pred             HHHHHHH-------HHHHHhccccCeeeeeecccceeccchhccccccchhhhhhhhhccC------CCcCHHHHHHHHH
Confidence            3322221       1122222213899999999998865321111111111 112223332      2578999999999


Q ss_pred             HHhcCCC--CCc-eEEeeCC
Q 017977          275 EALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       275 ~~~~~~~--~~g-~~~i~~~  291 (363)
                      .++....  ..| ++.+.+|
T Consensus       220 fL~s~~a~~itG~~i~vDGG  239 (241)
T PF13561_consen  220 FLASDAASYITGQVIPVDGG  239 (241)
T ss_dssp             HHHSGGGTTGTSEEEEESTT
T ss_pred             HHhCccccCccCCeEEECCC
Confidence            9998653  455 5555554

...

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.28  E-value=4.9e-11  Score=103.66  Aligned_cols=170  Identities=15%  Similarity=0.074  Sum_probs=109.9

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCc--ccccCCCC-----CccccCcccccC-cchHHhhcc----
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK--AELIFPGK-----KTRFFPGVMIAE-EPQWRDCIQ----  115 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~--~~~~~~~~-----~~~~~~~~d~~~-~~~~~~~~~----  115 (363)
                      .++++|+||||++.||+++++.|+++|++|+++.|+...  .+......     .......+|+.+ .+++..+++    
T Consensus         3 ~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~   82 (251)
T COG1028           3 LSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEE   82 (251)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHH
Confidence            345789999999999999999999999999988887654  11111100     112234478887 666654443    


Q ss_pred             ---CCCEEEEccCCCC----CCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCC-C
Q 017977          116 ---GSTAVVNLAGTPI----GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITW-L  187 (363)
Q Consensus       116 ---~~d~Vi~~a~~~~----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~-~  187 (363)
                         ++|++||+||...    ......+..+..+++|+.+...+.+++.+... .+++|++||..+. .       .+. .
T Consensus        83 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~-~~~Iv~isS~~~~-~-------~~~~~  153 (251)
T COG1028          83 EFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMK-KQRIVNISSVAGL-G-------GPPGQ  153 (251)
T ss_pred             HcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhh-hCeEEEECCchhc-C-------CCCCc
Confidence               4899999999743    12334567788999999999988886655311 1179999998532 1       122 2


Q ss_pred             cchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeC
Q 017977          188 SDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGK  234 (363)
Q Consensus       188 ~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~  234 (363)
                      ..|..+|.+...+..+       .. ......|+.+..+.||.+-.+
T Consensus       154 ~~Y~~sK~al~~~~~~-------l~-~e~~~~gi~v~~v~PG~~~t~  192 (251)
T COG1028         154 AAYAASKAALIGLTKA-------LA-LELAPRGIRVNAVAPGYIDTP  192 (251)
T ss_pred             chHHHHHHHHHHHHHH-------HH-HHHhhhCcEEEEEEeccCCCc
Confidence            4666665443333221       11 111123899999999955433

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=99.27  E-value=1.2e-10  Score=94.68  Aligned_cols=209  Identities=14%  Similarity=0.113  Sum_probs=125.0

Q ss_pred             cEEEEecCcchHHHHHHHHHHhC-CCEE-EEEeCCCCcccccCCC----CCccccCcccccCcchHHhhcc---------
Q 017977           51 MTVSVTGATGFIGRRLVQRLQAD-NHQV-RVLTRSRSKAELIFPG----KKTRFFPGVMIAEEPQWRDCIQ---------  115 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~-g~~V-~~~~r~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~---------  115 (363)
                      +.|+||||+..||.-|+++|++. |.++ ++..|+++........    ........+|+++.+++.++.+         
T Consensus         4 ksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~~   83 (249)
T KOG1611|consen    4 KSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGSD   83 (249)
T ss_pred             ccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhcccC
Confidence            56999999999999999999975 5555 4555656653222111    1222244688888877776553         


Q ss_pred             CCCEEEEccCCCCCC----CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCC-----------CeEEEeccceecCCc
Q 017977          116 GSTAVVNLAGTPIGT----RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVR-----------PSVLELVKPKYLMRA  178 (363)
Q Consensus       116 ~~d~Vi~~a~~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~-----------~~v~~SS~~~~yg~~  178 (363)
                      +.+.+|++||.....    .......-..+++|..++..+.+++..+  ....+           .+|++||.++-.+  
T Consensus        84 GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~~--  161 (249)
T KOG1611|consen   84 GLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSIG--  161 (249)
T ss_pred             CceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccccC--
Confidence            679999999975332    1233445677899999987776666543  12222           5888998853111  


Q ss_pred             ccccccCCCcchhhhhhhcccchhhHHHHHHHHHHHhcc--CCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCC
Q 017977          179 AHQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKV--NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGS  256 (363)
Q Consensus       179 ~~~e~~~~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~--~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  256 (363)
                         - ..   +     +...+|..+|.+.....+.....  ..++-++.++||+|-...++.                  
T Consensus       162 ---~-~~---~-----~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg~------------------  211 (249)
T KOG1611|consen  162 ---G-FR---P-----GGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGGK------------------  211 (249)
T ss_pred             ---C-CC---C-----cchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCCC------------------
Confidence               0 01   1     11122444443322222222111  237899999999998664431                  


Q ss_pred             CCCccccccHHHHHHHHHHHhcCC--CCCceEEeeCCCCcC
Q 017977          257 GQQWFSWIHLDDIVNLIYEALSNP--SYRGVINGTAPNPVR  295 (363)
Q Consensus       257 ~~~~~~~i~v~D~a~a~~~~~~~~--~~~g~~~i~~~~~~s  295 (363)
                          -..+.+++-+..++..+.+-  ..+|.|.-.++.+++
T Consensus       212 ----~a~ltveeSts~l~~~i~kL~~~hnG~ffn~dlt~ip  248 (249)
T KOG1611|consen  212 ----KAALTVEESTSKLLASINKLKNEHNGGFFNRDGTPIP  248 (249)
T ss_pred             ----CcccchhhhHHHHHHHHHhcCcccCcceEccCCCcCC
Confidence                13577888888888877643  355655544444443

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.27  E-value=8e-12  Score=96.81  Aligned_cols=211  Identities=18%  Similarity=0.141  Sum_probs=136.0

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCc-cccCcccccCcchHHhhccC---CCEEEEcc
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKT-RFFPGVMIAEEPQWRDCIQG---STAVVNLA  124 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~---~d~Vi~~a  124 (363)
                      .+..|++||+.-.||+.+++.|.+.|.+|+++.|++.....+..+... +.-..+|+.+.+.+.+.+..   +|.++|+|
T Consensus         6 aG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~~v~pidgLVNNA   85 (245)
T KOG1207|consen    6 AGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETPSLIIPIVGDLSAWEALFKLLVPVFPIDGLVNNA   85 (245)
T ss_pred             cceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCCcceeeeEecccHHHHHHHhhcccCchhhhhccc
Confidence            346899999999999999999999999999999999887665443321 22345677777777776653   69999999


Q ss_pred             CCCCCCCCC---hhhHHHHHHHHHHHHHHHHHHHHhC---CCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhcc
Q 017977          125 GTPIGTRWS---SEIKKEIKESRIRVTSKVVDLINES---PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLV  198 (363)
Q Consensus       125 ~~~~~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~  198 (363)
                      |.....++.   ++..+..|++|+.+..++.+...+-   +.-...+|.+||.++...       ....+.|+++|.+  
T Consensus        86 gvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~-------~~nHtvYcatKaA--  156 (245)
T KOG1207|consen   86 GVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRP-------LDNHTVYCATKAA--  156 (245)
T ss_pred             hhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccc-------cCCceEEeecHHH--
Confidence            986554433   3444567889999988777764331   133345999999853111       1123456665311  


Q ss_pred             cchhhHHHHHHHHHHHhccCC-CceEEEEeeceEEeCCC-CcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHHHHH
Q 017977          199 SFNRGVLVCREWEGTALKVNK-DVRLALIRIGIVLGKDG-GALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEA  276 (363)
Q Consensus       199 ~y~~~k~~~~~~~~~~~~~~~-~~~~~ilRp~~v~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~  276 (363)
                             +-........+... .+++..+.|..++...+ .+++.--..-..+...|+.      .|..++.+..|+..+
T Consensus       157 -------LDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~K~k~mL~riPl~------rFaEV~eVVnA~lfL  223 (245)
T KOG1207|consen  157 -------LDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDPDKKKKMLDRIPLK------RFAEVDEVVNAVLFL  223 (245)
T ss_pred             -------HHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCCchhccchhhhCchh------hhhHHHHHHhhheee
Confidence                   11111222222222 78999999999987643 2222221111222233332      378899999999999


Q ss_pred             hcCCC
Q 017977          277 LSNPS  281 (363)
Q Consensus       277 ~~~~~  281 (363)
                      +....
T Consensus       224 LSd~s  228 (245)
T KOG1207|consen  224 LSDNS  228 (245)
T ss_pred             eecCc
Confidence            87765

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.22  E-value=3.9e-10  Score=97.40  Aligned_cols=208  Identities=10%  Similarity=0.003  Sum_probs=120.2

Q ss_pred             HHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc----CCCEEEEccCCCCCCCCChhhHHHHH
Q 017977           66 LVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ----GSTAVVNLAGTPIGTRWSSEIKKEIK  141 (363)
Q Consensus        66 l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~----~~d~Vi~~a~~~~~~~~~~~~~~~~~  141 (363)
                      +++.|+++|++|++++|+......       .....+|+.|.+++.++++    ++|+|||+||...     ....+..+
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~~-------~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~-----~~~~~~~~   68 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMTL-------DGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPG-----TAPVELVA   68 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhhh-------hHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCC-----CCCHHHhh
Confidence            478899999999999998765321       1145689999998887775    5899999999641     22367889


Q ss_pred             HHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCC---cccccc----c--CCCcchh--hhhhhcccchhhHHHHHHH
Q 017977          142 ESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMR---AAHQEM----I--TWLSDYC--AKVYCLVSFNRGVLVCREW  210 (363)
Q Consensus       142 ~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~---~~~~e~----~--~~~~~~~--~~~~~~~~y~~~k~~~~~~  210 (363)
                      ++|+.++..+++++.+.-....++|++||. ..|+.   .+..+.    .  .....+.  ........|..+|.....+
T Consensus        69 ~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~  147 (241)
T PRK12428         69 RVNFLGLRHLTEALLPRMAPGGAIVNVASL-AGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEALILW  147 (241)
T ss_pred             hhchHHHHHHHHHHHHhccCCcEEEEeCcH-HhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHHHHHHH
Confidence            999999999999998631123579999998 44430   000000    0  0000000  0001112344445433332


Q ss_pred             HHHHh---ccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHHHHHhcCCC--CCc-
Q 017977          211 EGTAL---KVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS--YRG-  284 (363)
Q Consensus       211 ~~~~~---~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~--~~g-  284 (363)
                      .....   ....|+++++++||.+.++........... .......    .....+...+|+|++++.++....  ..| 
T Consensus       148 ~~~la~~e~~~~girvn~v~PG~v~T~~~~~~~~~~~~-~~~~~~~----~~~~~~~~pe~va~~~~~l~s~~~~~~~G~  222 (241)
T PRK12428        148 TMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSMLGQ-ERVDSDA----KRMGRPATADEQAAVLVFLCSDAARWINGV  222 (241)
T ss_pred             HHHHHHHhhhccCeEEEEeecCCccCcccccchhhhhh-Hhhhhcc----cccCCCCCHHHHHHHHHHHcChhhcCccCc
Confidence            22222   122489999999999988743211110000 0000000    011125779999999999886433  344 


Q ss_pred             eEEeeCC
Q 017977          285 VINGTAP  291 (363)
Q Consensus       285 ~~~i~~~  291 (363)
                      .+.+.++
T Consensus       223 ~i~vdgg  229 (241)
T PRK12428        223 NLPVDGG  229 (241)
T ss_pred             EEEecCc
Confidence            4444443

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.12  E-value=7.4e-10  Score=120.78  Aligned_cols=167  Identities=13%  Similarity=0.062  Sum_probs=113.9

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhC-CCEEEEEeCCCCcc----------------------------------------
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKA----------------------------------------   87 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~----------------------------------------   87 (363)
                      +.+++|||||+|.||..++++|+++ |++|++++|++...                                        
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            3568999999999999999999988 69999999983100                                        


Q ss_pred             -----------cccCCCCCccccCcccccCcchHHhhcc------CCCEEEEccCCCCCC---CCChhhHHHHHHHHHHH
Q 017977           88 -----------ELIFPGKKTRFFPGVMIAEEPQWRDCIQ------GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRV  147 (363)
Q Consensus        88 -----------~~~~~~~~~~~~~~~d~~~~~~~~~~~~------~~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~  147 (363)
                                 ..+...+....+..+|+.|.+++.++++      ++|.|||+||.....   ....+..+..+++|+.|
T Consensus      2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G 2155 (2582)
T TIGR02813      2076 VLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDG 2155 (2582)
T ss_pred             cchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHH
Confidence                       0000011112245689999888876664      479999999975432   33556678899999999


Q ss_pred             HHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEe
Q 017977          148 TSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIR  227 (363)
Q Consensus       148 ~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilR  227 (363)
                      +.++++++..  ...+++|++||..+.+|       .+....|...|.          ..............+++++.+.
T Consensus      2156 ~~~Ll~al~~--~~~~~IV~~SSvag~~G-------~~gqs~YaaAka----------aL~~la~~la~~~~~irV~sI~ 2216 (2582)
T TIGR02813      2156 LLSLLAALNA--ENIKLLALFSSAAGFYG-------NTGQSDYAMSND----------ILNKAALQLKALNPSAKVMSFN 2216 (2582)
T ss_pred             HHHHHHHHHH--hCCCeEEEEechhhcCC-------CCCcHHHHHHHH----------HHHHHHHHHHHHcCCcEEEEEE
Confidence            9999999987  56678999999876665       222335555431          1111111111112268999999


Q ss_pred             eceEEeC
Q 017977          228 IGIVLGK  234 (363)
Q Consensus       228 p~~v~g~  234 (363)
                      ||.+-+.
T Consensus      2217 wG~wdtg 2223 (2582)
T TIGR02813      2217 WGPWDGG 2223 (2582)
T ss_pred             CCeecCC
Confidence            9987654

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PTZ00325 malate dehydrogenase; Provisional

Probab=99.08  E-value=2e-09  Score=95.52  Aligned_cols=121  Identities=15%  Similarity=0.180  Sum_probs=87.6

Q ss_pred             CCCCccEEEEecCcchHHHHHHHHHHhCC--CEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEc
Q 017977           46 QKASQMTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNL  123 (363)
Q Consensus        46 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~  123 (363)
                      +..+|+||+|+|++|.||+.++..|..++  .++..++++......+-...........+.+|..++.+.++++|+||++
T Consensus         4 ~~~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~a~Dl~~~~~~~~v~~~td~~~~~~~l~gaDvVVit   83 (321)
T PTZ00325          4 SALKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVAADLSHIDTPAKVTGYADGELWEKALRGADLVLIC   83 (321)
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCcccccchhhcCcCceEEEecCCCchHHHhCCCCEEEEC
Confidence            44567799999999999999999998655  6899999933222111100000001112344555667889999999999


Q ss_pred             cCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEecc
Q 017977          124 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVK  171 (363)
Q Consensus       124 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~  171 (363)
                      +|.+..   ......+.+..|+..++++++++.+  .+.+++|+++|-
T Consensus        84 aG~~~~---~~~tR~dll~~N~~i~~~i~~~i~~--~~~~~iviv~SN  126 (321)
T PTZ00325         84 AGVPRK---PGMTRDDLFNTNAPIVRDLVAAVAS--SAPKAIVGIVSN  126 (321)
T ss_pred             CCCCCC---CCCCHHHHHHHHHHHHHHHHHHHHH--HCCCeEEEEecC
Confidence            998532   2234678899999999999999999  899999999988

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.01  E-value=1.1e-09  Score=93.72  Aligned_cols=168  Identities=17%  Similarity=0.107  Sum_probs=107.1

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCC-----CCccccCcccccCcch----HHhhccC--CCE
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KKTRFFPGVMIAEEPQ----WRDCIQG--STA  119 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~d~~~~~~----~~~~~~~--~d~  119 (363)
                      .-..|||||..||++.+++|+++|++|+.+.|+.++.+....+     ........+|+.+.+.    +.+.+.+  +.+
T Consensus        50 ~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~VgI  129 (312)
T KOG1014|consen   50 SWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLDVGI  129 (312)
T ss_pred             CEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCceEE
Confidence            4799999999999999999999999999999999886544321     1122344678887665    4444554  578


Q ss_pred             EEEccCCCCCCC-----CChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhh
Q 017977          120 VVNLAGTPIGTR-----WSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCA  192 (363)
Q Consensus       120 Vi~~a~~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~  192 (363)
                      +|||+|...+.+     ........++.+|+.++..+.+.....  ..+...+|++||.++..+       .|....|..
T Consensus       130 LVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p-------~p~~s~ysa  202 (312)
T KOG1014|consen  130 LVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIP-------TPLLSVYSA  202 (312)
T ss_pred             EEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEecccccccc-------ChhHHHHHH
Confidence            999999754321     112233556778888866665555542  145556899999855222       222234444


Q ss_pred             hhhhcccchhhHHHHHHH-HHHHhccC-CCceEEEEeeceEEeCC
Q 017977          193 KVYCLVSFNRGVLVCREW-EGTALKVN-KDVRLALIRIGIVLGKD  235 (363)
Q Consensus       193 ~~~~~~~y~~~k~~~~~~-~~~~~~~~-~~~~~~ilRp~~v~g~~  235 (363)
                      +          |.....+ .....+.+ .|+.+..+-|..|-++.
T Consensus       203 s----------K~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm  237 (312)
T KOG1014|consen  203 S----------KAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKM  237 (312)
T ss_pred             H----------HHHHHHHHHHHHHHHHhcCeEEEEeehhheeccc
Confidence            3          3211111 11111111 29999999999998774

>PLN00106 malate dehydrogenase

Probab=98.95  E-value=1.3e-08  Score=90.38  Aligned_cols=116  Identities=14%  Similarity=0.158  Sum_probs=85.3

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCC--CEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCCCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPI  128 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~~~  128 (363)
                      .||+|||++|.||..++..|..++  .++..+++++.....+-...........++.+.+++.+.++++|+|||+||.+.
T Consensus        19 ~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~a~Dl~~~~~~~~i~~~~~~~d~~~~l~~aDiVVitAG~~~   98 (323)
T PLN00106         19 FKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGVAADVSHINTPAQVRGFLGDDQLGDALKGADLVIIPAGVPR   98 (323)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCeeEchhhhCCcCceEEEEeCCCCHHHHcCCCCEEEEeCCCCC
Confidence            499999999999999999999766  489999997732211110000000111244456678889999999999999853


Q ss_pred             CCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEecc
Q 017977          129 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVK  171 (363)
Q Consensus       129 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~  171 (363)
                      .   ......+.+..|+...+++++++.+  .+.+.+|+++|-
T Consensus        99 ~---~g~~R~dll~~N~~i~~~i~~~i~~--~~p~aivivvSN  136 (323)
T PLN00106         99 K---PGMTRDDLFNINAGIVKTLCEAVAK--HCPNALVNIISN  136 (323)
T ss_pred             C---CCCCHHHHHHHHHHHHHHHHHHHHH--HCCCeEEEEeCC
Confidence            3   2234678999999999999999999  778888888876

>PRK06720 hypothetical protein; Provisional

Probab=98.91  E-value=5.5e-09  Score=84.46  Aligned_cols=80  Identities=19%  Similarity=0.165  Sum_probs=58.9

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccc----cCCCCCccccCcccccCcchHHhhc-------cCC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL----IFPGKKTRFFPGVMIAEEPQWRDCI-------QGS  117 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~~~~~~~~~~~d~~~~~~~~~~~-------~~~  117 (363)
                      .++.++||||+|.||+.+++.|.+.|++|++++|+......    +...........+|+.+.+++.+++       .++
T Consensus        15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~i   94 (169)
T PRK06720         15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSRI   94 (169)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            34689999999999999999999999999999998654322    1111111223467888877776544       368


Q ss_pred             CEEEEccCCCC
Q 017977          118 TAVVNLAGTPI  128 (363)
Q Consensus       118 d~Vi~~a~~~~  128 (363)
                      |++||+||...
T Consensus        95 DilVnnAG~~~  105 (169)
T PRK06720         95 DMLFQNAGLYK  105 (169)
T ss_pred             CEEEECCCcCC
Confidence            99999999744

>PRK08309 short chain dehydrogenase; Provisional

Probab=98.90  E-value=2.6e-08  Score=80.99  Aligned_cols=99  Identities=16%  Similarity=0.093  Sum_probs=72.8

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCC---CCCccccCcccccCcchHHhhcc-------CCCEE
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP---GKKTRFFPGVMIAEEPQWRDCIQ-------GSTAV  120 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~-------~~d~V  120 (363)
                      |+++|||||||+|. +++.|.++|++|++++|++.....+..   .........+|+.|.+++.++++       .+|.+
T Consensus         1 m~vlVtGGtG~gg~-la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~l   79 (177)
T PRK08309          1 MHALVIGGTGMLKR-VSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLA   79 (177)
T ss_pred             CEEEEECcCHHHHH-HHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEE
Confidence            58999999998876 999999999999999998755433221   11112234579999988877664       45778


Q ss_pred             EEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCC----CeEEEecc
Q 017977          121 VNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVR----PSVLELVK  171 (363)
Q Consensus       121 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~----~~v~~SS~  171 (363)
                      |+.+..                   .++.++..+|++  .+++    +++++-.+
T Consensus        80 v~~vh~-------------------~~~~~~~~~~~~--~gv~~~~~~~~h~~gs  113 (177)
T PRK08309         80 VAWIHS-------------------SAKDALSVVCRE--LDGSSETYRLFHVLGS  113 (177)
T ss_pred             EEeccc-------------------cchhhHHHHHHH--HccCCCCceEEEEeCC
Confidence            866643                   346689999999  7887    78887755

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=98.88  E-value=2.8e-08  Score=88.90  Aligned_cols=104  Identities=12%  Similarity=0.167  Sum_probs=73.7

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCC-------CEEEEEeCCCCc--ccccCCCCCc-c-ccCcccccCcchHHhhccCCCE
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADN-------HQVRVLTRSRSK--AELIFPGKKT-R-FFPGVMIAEEPQWRDCIQGSTA  119 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~--~~~~~~~~~~-~-~~~~~d~~~~~~~~~~~~~~d~  119 (363)
                      .||+||||+|++|++++..|+..+       .+|++++++...  .......... . ... .++....++.+.++++|+
T Consensus         3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~~~~~-~~~~~~~~~~~~l~~aDi   81 (325)
T cd01336           3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCAFPLL-KSVVATTDPEEAFKDVDV   81 (325)
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhcccccc-CCceecCCHHHHhCCCCE
Confidence            589999999999999999999844       589999996642  1111100000 0 011 134345667788999999


Q ss_pred             EEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhC
Q 017977          120 VVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES  158 (363)
Q Consensus       120 Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  158 (363)
                      |||+||.+...   .....+.++.|+.-.+.+.+.+.+.
T Consensus        82 VI~tAG~~~~~---~~~R~~l~~~N~~i~~~i~~~i~~~  117 (325)
T cd01336          82 AILVGAMPRKE---GMERKDLLKANVKIFKEQGEALDKY  117 (325)
T ss_pred             EEEeCCcCCCC---CCCHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999985332   2345789999999999999999883

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.72  E-value=4e-07  Score=74.42  Aligned_cols=206  Identities=13%  Similarity=0.011  Sum_probs=121.1

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCE--EEEEeCCCCcccccCCCC-CccccCcccccCcchHHhhcc-------CCCE
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQ--VRVLTRSRSKAELIFPGK-KTRFFPGVMIAEEPQWRDCIQ-------GSTA  119 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~-------~~d~  119 (363)
                      .+-+||||++..||.-+++.+.+++-+  +.+..|...+...+.... ........|++....+.+..+       +-|.
T Consensus         6 r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~gkr~i   85 (253)
T KOG1204|consen    6 RKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAELEGLKVAYGDDFVHVVGDITEEQLLGALREAPRKKGGKRDI   85 (253)
T ss_pred             ceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhcccccccceEEEecCCcceechHHHHHHHHHHHHhhhhhcCCceeE
Confidence            346899999999999999999988754  444455444422221110 111112234444333332222       4699


Q ss_pred             EEEccCCCCCC------CCChhhHHHHHHHHHHHHHHHHHHHHhC-CCC--CCCeEEEeccceecCCcccccccCCCcch
Q 017977          120 VVNLAGTPIGT------RWSSEIKKEIKESRIRVTSKVVDLINES-PEG--VRPSVLELVKPKYLMRAAHQEMITWLSDY  190 (363)
Q Consensus       120 Vi~~a~~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~--~~~~v~~SS~~~~yg~~~~~e~~~~~~~~  190 (363)
                      |||+||...+.      ..+.+....+++.|+.+...+...+.+. ...  .+.+|++||.+++-          |.+. 
T Consensus        86 iI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~----------p~~~-  154 (253)
T KOG1204|consen   86 IIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVR----------PFSS-  154 (253)
T ss_pred             EEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhc----------cccH-
Confidence            99999986552      2344567889999999988888777654 222  36699999985421          1111 


Q ss_pred             hhhhhhcccchhhHHHHHHHHHHHhccCC-CceEEEEeeceEEeCCC---Ccccc----hHHHHHHHhCCCCCCCCCccc
Q 017977          191 CAKVYCLVSFNRGVLVCREWEGTALKVNK-DVRLALIRIGIVLGKDG---GALAK----MIPLFMMFAGGPLGSGQQWFS  262 (363)
Q Consensus       191 ~~~~~~~~~y~~~k~~~~~~~~~~~~~~~-~~~~~ilRp~~v~g~~~---~~~~~----~~~~~~~~~~~~~~~~~~~~~  262 (363)
                            ++.|..+|.+...+.......+. ++.+..++||.+=.+.+   ...++    ....++.+..        .-.
T Consensus       155 ------wa~yc~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el~~--------~~~  220 (253)
T KOG1204|consen  155 ------WAAYCSSKAARNMYFMVLASEEPFDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFKELKE--------SGQ  220 (253)
T ss_pred             ------HHHhhhhHHHHHHHHHHHhhcCccceeEEEccCCcccchhHHHHhhccCCCHHHHHHHHHHHh--------cCC
Confidence                  12244445444444444444443 89999999998865532   11111    1222222111        113


Q ss_pred             cccHHHHHHHHHHHhcCC
Q 017977          263 WIHLDDIVNLIYEALSNP  280 (363)
Q Consensus       263 ~i~v~D~a~a~~~~~~~~  280 (363)
                      +++..+.|+.+..++++.
T Consensus       221 ll~~~~~a~~l~~L~e~~  238 (253)
T KOG1204|consen  221 LLDPQVTAKVLAKLLEKG  238 (253)
T ss_pred             cCChhhHHHHHHHHHHhc
Confidence            678888999999888875

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.72  E-value=2.8e-08  Score=89.44  Aligned_cols=92  Identities=22%  Similarity=0.195  Sum_probs=74.2

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCC-CEEEEEeCCCCcccccCCCC-CccccCcccccCcchHHhhccCCCEEEEccCCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGK-KTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  127 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~~  127 (363)
                      ||+|+|+|+ |+||+.++..|+++| .+|++.+|+.++..+..... .......+|..|.+++.+++++.|+||+++...
T Consensus         1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~~   79 (389)
T COG1748           1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPPF   79 (389)
T ss_pred             CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCch
Confidence            579999998 999999999999998 99999999988876654332 223356789999999999999999999999763


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCC
Q 017977          128 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVR  163 (363)
Q Consensus       128 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~  163 (363)
                      .                   ..+++++|.+  .++.
T Consensus        80 ~-------------------~~~i~ka~i~--~gv~   94 (389)
T COG1748          80 V-------------------DLTILKACIK--TGVD   94 (389)
T ss_pred             h-------------------hHHHHHHHHH--hCCC
Confidence            1                   1268888888  5654

>PRK05086 malate dehydrogenase; Provisional

Probab=98.64  E-value=3.9e-07  Score=81.21  Aligned_cols=113  Identities=16%  Similarity=0.208  Sum_probs=79.3

Q ss_pred             cEEEEecCcchHHHHHHHHHHh---CCCEEEEEeCCCCcccccCCCCCccccC-cccc--cCcchHHhhccCCCEEEEcc
Q 017977           51 MTVSVTGATGFIGRRLVQRLQA---DNHQVRVLTRSRSKAELIFPGKKTRFFP-GVMI--AEEPQWRDCIQGSTAVVNLA  124 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~---~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~d~--~~~~~~~~~~~~~d~Vi~~a  124 (363)
                      |||+|+||+|.+|++++..|..   .++++.+++|++.. .........  .. ...+  .+.+++.+.++++|+||.++
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~-~g~alDl~~--~~~~~~i~~~~~~d~~~~l~~~DiVIita   77 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVT-PGVAVDLSH--IPTAVKIKGFSGEDPTPALEGADVVLISA   77 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCC-cceehhhhc--CCCCceEEEeCCCCHHHHcCCCCEEEEcC
Confidence            6999999999999999998854   34688888987532 110000000  00 0111  12456667789999999999


Q ss_pred             CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEecc
Q 017977          125 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVK  171 (363)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~  171 (363)
                      |.....   .....+.+..|.....++++++.+  .+.+++|.+.|=
T Consensus        78 G~~~~~---~~~R~dll~~N~~i~~~ii~~i~~--~~~~~ivivvsN  119 (312)
T PRK05086         78 GVARKP---GMDRSDLFNVNAGIVKNLVEKVAK--TCPKACIGIITN  119 (312)
T ss_pred             CCCCCC---CCCHHHHHHHHHHHHHHHHHHHHH--hCCCeEEEEccC
Confidence            985432   234678899999999999999999  777877777764

>PRK09620 hypothetical protein; Provisional

Probab=98.58  E-value=1.3e-07  Score=79.98  Aligned_cols=78  Identities=19%  Similarity=0.128  Sum_probs=50.7

Q ss_pred             CccEEEEecCc----------------chHHHHHHHHHHhCCCEEEEEeCCCCcccc-cCCCCCccccCcccccCcchHH
Q 017977           49 SQMTVSVTGAT----------------GFIGRRLVQRLQADNHQVRVLTRSRSKAEL-IFPGKKTRFFPGVMIAEEPQWR  111 (363)
Q Consensus        49 ~~~~vlVtGat----------------G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~d~~~~~~~~  111 (363)
                      .+++||||+|.                ||+|++|+++|+++|++|+++++....... ........ ....+....+.+.
T Consensus         2 ~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~~~~~~~~~-~V~s~~d~~~~l~   80 (229)
T PRK09620          2 KGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPNDINNQLELH-PFEGIIDLQDKMK   80 (229)
T ss_pred             CCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCcccCCceeEE-EEecHHHHHHHHH
Confidence            35789999886                999999999999999999999875432111 11010000 1111111224666


Q ss_pred             hhcc--CCCEEEEccCCC
Q 017977          112 DCIQ--GSTAVVNLAGTP  127 (363)
Q Consensus       112 ~~~~--~~d~Vi~~a~~~  127 (363)
                      +.+.  ++|+|||+|+..
T Consensus        81 ~~~~~~~~D~VIH~AAvs   98 (229)
T PRK09620         81 SIITHEKVDAVIMAAAGS   98 (229)
T ss_pred             HHhcccCCCEEEECcccc
Confidence            6674  689999999973

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.53  E-value=2.4e-07  Score=78.70  Aligned_cols=70  Identities=13%  Similarity=0.212  Sum_probs=45.2

Q ss_pred             EEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCc----chHHhhccCCCEEEEccCCC
Q 017977           53 VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEE----PQWRDCIQGSTAVVNLAGTP  127 (363)
Q Consensus        53 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~----~~~~~~~~~~d~Vi~~a~~~  127 (363)
                      ++=-.+|||+|++|+++|+++|++|++++|...........     .....+...    +.+.+.+.++|+|||+||..
T Consensus        19 ~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~~~~~~-----v~~i~v~s~~~m~~~l~~~~~~~DivIh~AAvs   92 (229)
T PRK06732         19 GITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVKPEPHPN-----LSIIEIENVDDLLETLEPLVKDHDVLIHSMAVS   92 (229)
T ss_pred             eecCccchHHHHHHHHHHHhCCCEEEEEECcccccCCCCCC-----eEEEEEecHHHHHHHHHHHhcCCCEEEeCCccC
Confidence            33335689999999999999999999999764321100000     001112222    34455667899999999974

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.53  E-value=5.7e-07  Score=70.04  Aligned_cols=221  Identities=18%  Similarity=0.150  Sum_probs=135.0

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccC-CCCCccccCcccccCcchHHhhcc-------CCCEE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF-PGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAV  120 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~V  120 (363)
                      .....+||||...+|+..++.|.+.|..|..++-..++..... +.+....+.-.|+++++++..++.       ..|+.
T Consensus         8 kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld~~   87 (260)
T KOG1199|consen    8 KGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDAL   87 (260)
T ss_pred             cCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccceeee
Confidence            3346899999999999999999999999999998887755433 333334466689999888887764       46999


Q ss_pred             EEccCCCCC---------CCCChhhHHHHHHHHHHHHHHHHHHHHhC------CCCCCCeEEEeccc-eecCCccccccc
Q 017977          121 VNLAGTPIG---------TRWSSEIKKEIKESRIRVTSKVVDLINES------PEGVRPSVLELVKP-KYLMRAAHQEMI  184 (363)
Q Consensus       121 i~~a~~~~~---------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~~~~v~~SS~~-~~yg~~~~~e~~  184 (363)
                      +||||....         .....++.+..+++|+.|+.|+++.....      ..+.+|-|.+-+.+ ..|.      ..
T Consensus        88 vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafd------gq  161 (260)
T KOG1199|consen   88 VNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFD------GQ  161 (260)
T ss_pred             eeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeec------Cc
Confidence            999997533         12234566778899999999998866532      12344545555442 3222      01


Q ss_pred             CCCcchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccc
Q 017977          185 TWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWI  264 (363)
Q Consensus       185 ~~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  264 (363)
                      .....|.++|.+...-+.       -...... ..|+++..+-|+.+-.|-...+..-...|   ..+.+..+.   .+-
T Consensus       162 ~gqaaysaskgaivgmtl-------piardla-~~gir~~tiapglf~tpllsslpekv~~f---la~~ipfps---rlg  227 (260)
T KOG1199|consen  162 TGQAAYSASKGAIVGMTL-------PIARDLA-GDGIRFNTIAPGLFDTPLLSSLPEKVKSF---LAQLIPFPS---RLG  227 (260)
T ss_pred             cchhhhhcccCceEeeec-------hhhhhcc-cCceEEEeecccccCChhhhhhhHHHHHH---HHHhCCCch---hcC
Confidence            112344444332221110       0111111 12899999999877666443322222222   111222222   245


Q ss_pred             cHHHHHHHHHHHhcCCCCCc-eEEee
Q 017977          265 HLDDIVNLIYEALSNPSYRG-VINGT  289 (363)
Q Consensus       265 ~v~D~a~a~~~~~~~~~~~g-~~~i~  289 (363)
                      +..+.+..+..+++++-.+| ++-+.
T Consensus       228 ~p~eyahlvqaiienp~lngevir~d  253 (260)
T KOG1199|consen  228 HPHEYAHLVQAIIENPYLNGEVIRFD  253 (260)
T ss_pred             ChHHHHHHHHHHHhCcccCCeEEEec
Confidence            67777888888888887666 54443

>cd00704 MDH Malate dehydrogenase

Probab=98.48  E-value=1.8e-06  Score=77.18  Aligned_cols=101  Identities=15%  Similarity=0.231  Sum_probs=70.6

Q ss_pred             EEEEecCcchHHHHHHHHHHhCC-------CEEEEEeCCC--CcccccCCCCCc---cccCcccccCcchHHhhccCCCE
Q 017977           52 TVSVTGATGFIGRRLVQRLQADN-------HQVRVLTRSR--SKAELIFPGKKT---RFFPGVMIAEEPQWRDCIQGSTA  119 (363)
Q Consensus        52 ~vlVtGatG~iG~~l~~~L~~~g-------~~V~~~~r~~--~~~~~~~~~~~~---~~~~~~d~~~~~~~~~~~~~~d~  119 (363)
                      ||.|+||+|.+|+.++..|+..|       +++..++++.  +...........   .......+.  ....+.++++|+
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~~~Dl~d~~~~~~~~~~i~--~~~~~~~~~aDi   79 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGVVMELQDCAFPLLKGVVIT--TDPEEAFKDVDV   79 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccceeeeehhhhcccccCCcEEe--cChHHHhCCCCE
Confidence            79999999999999999999765       2599999876  322111100000   000111221  345678899999


Q ss_pred             EEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHh
Q 017977          120 VVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINE  157 (363)
Q Consensus       120 Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  157 (363)
                      |||+||.+..   ..+...+.+..|....+.+...+.+
T Consensus        80 VVitAG~~~~---~g~tR~dll~~N~~i~~~i~~~i~~  114 (323)
T cd00704          80 AILVGAFPRK---PGMERADLLRKNAKIFKEQGEALNK  114 (323)
T ss_pred             EEEeCCCCCC---cCCcHHHHHHHhHHHHHHHHHHHHH
Confidence            9999998533   2335678999999999999999999

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=98.46  E-value=5.8e-07  Score=74.52  Aligned_cols=178  Identities=14%  Similarity=0.049  Sum_probs=106.0

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCC-----CEEEEEeCCCCccccc----CCC----CCccccCcccccCcchHHhh---
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADN-----HQVRVLTRSRSKAELI----FPG----KKTRFFPGVMIAEEPQWRDC---  113 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g-----~~V~~~~r~~~~~~~~----~~~----~~~~~~~~~d~~~~~~~~~~---  113 (363)
                      .+.++|||++..+|-+|+++|++..     .++.+.+|+.++.+..    +..    .....+..+|+.+-.++..+   
T Consensus         3 RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~d   82 (341)
T KOG1478|consen    3 RKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKD   82 (341)
T ss_pred             ceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHH
Confidence            3568999999999999999999864     3678889988775432    111    11111334666655444433   


Q ss_pred             ----ccCCCEEEEccCCCCCCCCC------------------------------hhhHHHHHHHHHHHHHHHHHHHHhC-
Q 017977          114 ----IQGSTAVVNLAGTPIGTRWS------------------------------SEIKKEIKESRIRVTSKVVDLINES-  158 (363)
Q Consensus       114 ----~~~~d~Vi~~a~~~~~~~~~------------------------------~~~~~~~~~~n~~~~~~l~~~~~~~-  158 (363)
                          ++..|.|+-+||........                              .+.-..++++|+.|..-+++.+... 
T Consensus        83 i~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pll  162 (341)
T KOG1478|consen   83 IKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPLL  162 (341)
T ss_pred             HHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhHh
Confidence                45679999999874332111                              2345678999999988877776654 


Q ss_pred             -CCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhcccchhhHHHHHHHHHHHhccCC--CceEEEEeeceEEeCC
Q 017977          159 -PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNK--DVRLALIRIGIVLGKD  235 (363)
Q Consensus       159 -~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~--~~~~~ilRp~~v~g~~  235 (363)
                       .....++|.+||..+       +...-...++.-. ....-|..+|++........++...  |+.-.++.||......
T Consensus       163 ~~~~~~~lvwtSS~~a-------~kk~lsleD~q~~-kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt~~  234 (341)
T KOG1478|consen  163 CHSDNPQLVWTSSRMA-------RKKNLSLEDFQHS-KGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFTTNS  234 (341)
T ss_pred             hcCCCCeEEEEeeccc-------ccccCCHHHHhhh-cCCCCcchhHHHHHHHHHHHhccccccchhhhcccCceeecch
Confidence             234447999998732       1111111111111 1122244445444444444333322  7888999999877653

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=98.42  E-value=4.9e-07  Score=70.72  Aligned_cols=114  Identities=17%  Similarity=0.186  Sum_probs=76.3

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCC--CEEEEEeCCCCcccccCCCCCc-cccCcccccCcchHHhhccCCCEEEEccCCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPGKKT-RFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  127 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~~  127 (363)
                      |||.|+|++|.+|++++-.|...+  .++..++++............. ......+..-.....+.++++|+||-+||.+
T Consensus         1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~~aDivvitag~~   80 (141)
T PF00056_consen    1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSGDYEALKDADIVVITAGVP   80 (141)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEESSGGGGTTESEEEETTSTS
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhcccccccccccccccccccEEEEecccc
Confidence            699999999999999999999887  5899999986543221100000 0000011111223456678999999999975


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEe
Q 017977          128 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLEL  169 (363)
Q Consensus       128 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~S  169 (363)
                      ..   ......+.++.|..-.+.+.+.+.+  .+.+.++.+-
T Consensus        81 ~~---~g~sR~~ll~~N~~i~~~~~~~i~~--~~p~~~vivv  117 (141)
T PF00056_consen   81 RK---PGMSRLDLLEANAKIVKEIAKKIAK--YAPDAIVIVV  117 (141)
T ss_dssp             SS---TTSSHHHHHHHHHHHHHHHHHHHHH--HSTTSEEEE-
T ss_pred             cc---ccccHHHHHHHhHhHHHHHHHHHHH--hCCccEEEEe
Confidence            32   2234678889999999999999999  4544444443

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=98.39  E-value=5e-06  Score=74.32  Aligned_cols=169  Identities=13%  Similarity=0.111  Sum_probs=98.5

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCC-------EEEEEeCCCCc--ccccCCCCCc---cccCcccccCcchHHhhccCCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNH-------QVRVLTRSRSK--AELIFPGKKT---RFFPGVMIAEEPQWRDCIQGST  118 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~--~~~~~~~~~~---~~~~~~d~~~~~~~~~~~~~~d  118 (363)
                      +||.|+|++|.+|..++..|+..|.       ++..+++....  ..........   .....+.+.  ....+.++++|
T Consensus         3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~--~~~~~~~~daD   80 (322)
T cd01338           3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVIT--DDPNVAFKDAD   80 (322)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEe--cCcHHHhCCCC
Confidence            6999999999999999999998774       79999985433  2211111100   000112232  23346789999


Q ss_pred             EEEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCC-CC-eEEEeccceecCCcccccc--cCCCcchhhhh
Q 017977          119 AVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGV-RP-SVLELVKPKYLMRAAHQEM--ITWLSDYCAKV  194 (363)
Q Consensus       119 ~Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~-~v~~SS~~~~yg~~~~~e~--~~~~~~~~~~~  194 (363)
                      +||.+||.+..   ......+.++.|+.-.+.+.+.+.+  ... .. ++.+|.-..+.-.......  .|+..      
T Consensus        81 ivvitaG~~~k---~g~tR~dll~~N~~i~~~i~~~i~~--~~~~~~iiivvsNPvD~~t~~~~k~sg~~p~~~------  149 (322)
T cd01338          81 WALLVGAKPRG---PGMERADLLKANGKIFTAQGKALND--VASRDVKVLVVGNPCNTNALIAMKNAPDIPPDN------  149 (322)
T ss_pred             EEEEeCCCCCC---CCCcHHHHHHHHHHHHHHHHHHHHh--hCCCCeEEEEecCcHHHHHHHHHHHcCCCChHh------
Confidence            99999998533   2334678899999999999999998  442 33 4444321000000000000  11111      


Q ss_pred             hhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCC
Q 017977          195 YCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGG  237 (363)
Q Consensus       195 ~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~  237 (363)
                          -|+.+++..+. .+.......+++...+|...|||+++.
T Consensus       150 ----ViG~t~LDs~R-l~~~la~~lgv~~~~v~~~~V~GeHG~  187 (322)
T cd01338         150 ----FTAMTRLDHNR-AKSQLAKKAGVPVTDVKNMVIWGNHSP  187 (322)
T ss_pred             ----eEEehHHHHHH-HHHHHHHHhCcChhHeEEEEEEeCCcc
Confidence                12223322222 222333334899999999999999854

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=98.37  E-value=2.4e-06  Score=73.43  Aligned_cols=92  Identities=16%  Similarity=0.162  Sum_probs=68.8

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc--CCCEEEEccCCCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGTPI  128 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~Vi~~a~~~~  128 (363)
                      |+|||+||||. |+.|++.|.+.|++|++..++......+......  ....+..+.+++.+.++  ++|+||+++... 
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~~g~~--~v~~g~l~~~~l~~~l~~~~i~~VIDAtHPf-   76 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPIHQAL--TVHTGALDPQELREFLKRHSIDILVDATHPF-   76 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccccCCc--eEEECCCCHHHHHHHHHhcCCCEEEEcCCHH-
Confidence            68999999999 9999999999999999999998765554433210  12234557777877775  589999998751 


Q ss_pred             CCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCC
Q 017977          129 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVR  163 (363)
Q Consensus       129 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~  163 (363)
                                     -.....++.++|.+  .++.
T Consensus        77 ---------------A~~is~~a~~a~~~--~~ip   94 (256)
T TIGR00715        77 ---------------AAQITTNATAVCKE--LGIP   94 (256)
T ss_pred             ---------------HHHHHHHHHHHHHH--hCCc
Confidence                           11335689999999  6776

This enzyme was found to be a monomer by gel filtration.

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=98.32  E-value=7.8e-06  Score=73.14  Aligned_cols=95  Identities=13%  Similarity=0.141  Sum_probs=68.9

Q ss_pred             EEEEecCcchHHHHHHHHHHhCCC-------EEEEEeCCCCcccccCCCCCccccCcccccCcc-----------hHHhh
Q 017977           52 TVSVTGATGFIGRRLVQRLQADNH-------QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEP-----------QWRDC  113 (363)
Q Consensus        52 ~vlVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~-----------~~~~~  113 (363)
                      ||.|+||+|.+|++++..|...|.       +++.+++++......        ....|+.|..           ...+.
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~~a~--------g~~~Dl~d~~~~~~~~~~~~~~~~~~   72 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMKVLE--------GVVMELMDCAFPLLDGVVPTHDPAVA   72 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcccccc--------eeEeehhcccchhcCceeccCChHHH
Confidence            589999999999999999997542       699999865431100        1112222221           34567


Q ss_pred             ccCCCEEEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHh
Q 017977          114 IQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINE  157 (363)
Q Consensus       114 ~~~~d~Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  157 (363)
                      ++++|+||++||.+..   ..+...+.+..|+.-.+.+.+.+.+
T Consensus        73 ~~~aDiVVitAG~~~~---~~~tr~~ll~~N~~i~k~i~~~i~~  113 (324)
T TIGR01758        73 FTDVDVAILVGAFPRK---EGMERRDLLSKNVKIFKEQGRALDK  113 (324)
T ss_pred             hCCCCEEEEcCCCCCC---CCCcHHHHHHHHHHHHHHHHHHHHh
Confidence            8999999999998533   2233678899999999999999999

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.27  E-value=1.1e-06  Score=78.20  Aligned_cols=72  Identities=26%  Similarity=0.381  Sum_probs=54.5

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhC-C-CEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQAD-N-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~-g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      ..+++|+||||+|+||+.++++|+++ | .+++++.|+..+...+...     +...++.   ++.+++.++|+|||+++
T Consensus       153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~e-----l~~~~i~---~l~~~l~~aDiVv~~ts  224 (340)
T PRK14982        153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAE-----LGGGKIL---SLEEALPEADIVVWVAS  224 (340)
T ss_pred             cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHH-----hccccHH---hHHHHHccCCEEEECCc
Confidence            45579999999999999999999864 5 6999999987665544322     1122333   46678889999999998


Q ss_pred             CC
Q 017977          126 TP  127 (363)
Q Consensus       126 ~~  127 (363)
                      .+
T Consensus       225 ~~  226 (340)
T PRK14982        225 MP  226 (340)
T ss_pred             CC
Confidence            74

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.24  E-value=9.8e-07  Score=73.40  Aligned_cols=78  Identities=19%  Similarity=0.242  Sum_probs=57.6

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCC---ccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKK---TRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      ..++++|+||+|.+|+.+++.|.+.|++|++++|+..+...+.....   ......+|..+.+++.+.++++|+||++..
T Consensus        27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi~at~  106 (194)
T cd01078          27 KGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVFAAGA  106 (194)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEEECCC
Confidence            34699999999999999999999999999999998765433321100   000223456677778888999999998776


Q ss_pred             C
Q 017977          126 T  126 (363)
Q Consensus       126 ~  126 (363)
                      .
T Consensus       107 ~  107 (194)
T cd01078         107 A  107 (194)
T ss_pred             C
Confidence            4

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.22  E-value=1.5e-06  Score=80.44  Aligned_cols=73  Identities=25%  Similarity=0.306  Sum_probs=56.2

Q ss_pred             EEEecCcchHHHHHHHHHHhCC-C-EEEEEeCCCCcccccCC--CCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           53 VSVTGATGFIGRRLVQRLQADN-H-QVRVLTRSRSKAELIFP--GKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        53 vlVtGatG~iG~~l~~~L~~~g-~-~V~~~~r~~~~~~~~~~--~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      |+|+|| |++|+.+++.|++++ + +|.+.+|+..+.+.+..  .........+|+.|.+++.++++++|+||||++.
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp   77 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGP   77 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSG
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCcc
Confidence            799999 999999999999986 4 89999999988665543  2223335568999999999999999999999986

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=98.17  E-value=2.6e-05  Score=69.57  Aligned_cols=116  Identities=17%  Similarity=0.190  Sum_probs=74.7

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCC--EEEEEeCCC--CcccccCCCCCc---cccCcccccCcchHHhhccCCCEEEEc
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSR--SKAELIFPGKKT---RFFPGVMIAEEPQWRDCIQGSTAVVNL  123 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~--~~~~~~~~~~~~---~~~~~~d~~~~~~~~~~~~~~d~Vi~~  123 (363)
                      |||.|+|++|.+|..++..|+..|+  +|++++|..  +...........   ......++.-..++. .+.++|+||-+
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~i~~~~d~~-~l~~aDiViit   79 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIKISSDLS-DVAGSDIVIIT   79 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCcEEEECCCHH-HhCCCCEEEEe
Confidence            6899999999999999999999986  599999954  222111100000   000111232222344 48999999999


Q ss_pred             cCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEecc
Q 017977          124 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVK  171 (363)
Q Consensus       124 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~  171 (363)
                      +|.+..   ......+.++.|....+.+++.+.+.. ....+|.+++.
T Consensus        80 ag~p~~---~~~~r~dl~~~n~~i~~~~~~~i~~~~-~~~~viv~~np  123 (309)
T cd05294          80 AGVPRK---EGMSRLDLAKKNAKIVKKYAKQIAEFA-PDTKILVVTNP  123 (309)
T ss_pred             cCCCCC---CCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEeCCc
Confidence            997532   222346788899999999999998841 22235555543

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=98.14  E-value=5.9e-06  Score=70.15  Aligned_cols=67  Identities=19%  Similarity=0.362  Sum_probs=46.5

Q ss_pred             EEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhc-------cCCCEEEEccC
Q 017977           53 VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI-------QGSTAVVNLAG  125 (363)
Q Consensus        53 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-------~~~d~Vi~~a~  125 (363)
                      .+=-.++|++|++++++|+++|++|+++++.... .   ...    ...+|+.+.++..+++       .++|++||+||
T Consensus        18 ~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~l-~---~~~----~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnnAg   89 (227)
T TIGR02114        18 SITNHSTGHLGKIITETFLSAGHEVTLVTTKRAL-K---PEP----HPNLSIREIETTKDLLITLKELVQEHDILIHSMA   89 (227)
T ss_pred             eecCCcccHHHHHHHHHHHHCCCEEEEEcChhhc-c---ccc----CCcceeecHHHHHHHHHHHHHHcCCCCEEEECCE
Confidence            3333458999999999999999999998863211 1   100    2246777766555443       46899999999


Q ss_pred             CC
Q 017977          126 TP  127 (363)
Q Consensus       126 ~~  127 (363)
                      ..
T Consensus        90 v~   91 (227)
T TIGR02114        90 VS   91 (227)
T ss_pred             ec
Confidence            64

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.14  E-value=5.7e-06  Score=75.94  Aligned_cols=73  Identities=11%  Similarity=0.133  Sum_probs=55.8

Q ss_pred             CCccEEEEecC----------------cchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHH
Q 017977           48 ASQMTVSVTGA----------------TGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWR  111 (363)
Q Consensus        48 ~~~~~vlVtGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~  111 (363)
                      ..+++|+||||                +|.+|.+++++|.++|++|++++++... .. ..  .   ...+|+.+.+++.
T Consensus       186 l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~~-~~-~~--~---~~~~dv~~~~~~~  258 (399)
T PRK05579        186 LAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVNL-PT-PA--G---VKRIDVESAQEML  258 (399)
T ss_pred             cCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCccc-cC-CC--C---cEEEccCCHHHHH
Confidence            45679999999                9999999999999999999999987631 11 11  1   2346777776666


Q ss_pred             hhc----cCCCEEEEccCCC
Q 017977          112 DCI----QGSTAVVNLAGTP  127 (363)
Q Consensus       112 ~~~----~~~d~Vi~~a~~~  127 (363)
                      +.+    .++|++||+||..
T Consensus       259 ~~v~~~~~~~DilI~~Aav~  278 (399)
T PRK05579        259 DAVLAALPQADIFIMAAAVA  278 (399)
T ss_pred             HHHHHhcCCCCEEEEccccc
Confidence            554    4689999999974

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=98.11  E-value=4.8e-05  Score=67.44  Aligned_cols=109  Identities=15%  Similarity=0.208  Sum_probs=75.0

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCC--CEEEEEeCCCCcccccCCCCCccccCccccc---CcchHHhhccCCCEEEEccC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPGKKTRFFPGVMIA---EEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~---~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      |||.|+|++|.+|++++-.|+..|  .++..++.+......+-....   .....+.   ..+++.+.++++|+||-+||
T Consensus         1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~~a~g~alDL~~~---~~~~~i~~~~~~~~~y~~~~daDivvitaG   77 (310)
T cd01337           1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIVNTPGVAADLSHI---NTPAKVTGYLGPEELKKALKGADVVVIPAG   77 (310)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecCccceeehHhHhC---CCcceEEEecCCCchHHhcCCCCEEEEeCC
Confidence            589999999999999999999887  489999887211111100000   0112232   22345678999999999999


Q ss_pred             CCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEE
Q 017977          126 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVL  167 (363)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~  167 (363)
                      .+..   ......+.++.|..-.+.+.+.+.+  .+.+.++.
T Consensus        78 ~~~k---~g~tR~dll~~N~~i~~~i~~~i~~--~~p~a~vi  114 (310)
T cd01337          78 VPRK---PGMTRDDLFNINAGIVRDLATAVAK--ACPKALIL  114 (310)
T ss_pred             CCCC---CCCCHHHHHHHHHHHHHHHHHHHHH--hCCCeEEE
Confidence            8533   2335678999999999999999998  44443343

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=98.04  E-value=3.2e-05  Score=70.70  Aligned_cols=99  Identities=14%  Similarity=0.134  Sum_probs=63.4

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhC-CCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHh-hccCCCEEEEccC
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRD-CIQGSTAVVNLAG  125 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~~~~d~Vi~~a~  125 (363)
                      .++|||.|.||||++|+.|++.|.++ +++|..+.++.+....+.....  .....+..+.++++. .++++|+||.+.+
T Consensus        36 ~~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG~~i~~~~~--~l~~~~~~~~~~~~~~~~~~~DvVf~Alp  113 (381)
T PLN02968         36 EEKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAGQSFGSVFP--HLITQDLPNLVAVKDADFSDVDAVFCCLP  113 (381)
T ss_pred             ccccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcCCCchhhCc--cccCccccceecCCHHHhcCCCEEEEcCC
Confidence            45679999999999999999999998 6799999886544332211110  011223333333332 2578999998765


Q ss_pred             CCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEecc
Q 017977          126 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVK  171 (363)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~  171 (363)
                      .                   ....+++..+ +  .+ .++|-+|+.
T Consensus       114 ~-------------------~~s~~i~~~~-~--~g-~~VIDlSs~  136 (381)
T PLN02968        114 H-------------------GTTQEIIKAL-P--KD-LKIVDLSAD  136 (381)
T ss_pred             H-------------------HHHHHHHHHH-h--CC-CEEEEcCch
Confidence            3                   1234666665 3  34 458888877

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=97.98  E-value=1.7e-05  Score=71.43  Aligned_cols=79  Identities=11%  Similarity=-0.010  Sum_probs=56.1

Q ss_pred             CCccEEEEecCcchHHHH--HHHHHHhCCCEEEEEeCCCCcc---------------cc-cCCCCCccccCcccccCcch
Q 017977           48 ASQMTVSVTGATGFIGRR--LVQRLQADNHQVRVLTRSRSKA---------------EL-IFPGKKTRFFPGVMIAEEPQ  109 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~--l~~~L~~~g~~V~~~~r~~~~~---------------~~-~~~~~~~~~~~~~d~~~~~~  109 (363)
                      ..++++||||+++.+|.+  +++.| +.|.+|.++++...+.               .. ............+|+.+.++
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~  117 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEI  117 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence            445799999999999999  89999 9999999988533111               11 11111112234679998877


Q ss_pred             HHhhcc-------CCCEEEEccCCC
Q 017977          110 WRDCIQ-------GSTAVVNLAGTP  127 (363)
Q Consensus       110 ~~~~~~-------~~d~Vi~~a~~~  127 (363)
                      +.++++       ++|++||++|.+
T Consensus       118 v~~lie~I~e~~G~IDiLVnSaA~~  142 (398)
T PRK13656        118 KQKVIELIKQDLGQVDLVVYSLASP  142 (398)
T ss_pred             HHHHHHHHHHhcCCCCEEEECCccC
Confidence            765553       689999999986

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=97.97  E-value=3.5e-05  Score=69.58  Aligned_cols=70  Identities=24%  Similarity=0.332  Sum_probs=47.0

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCC---EEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNH---QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      ||+|+|.||||++|+.|++.|.++||   ++.++.+..+....+....     ....+.|.+.  ..++++|+||.+++.
T Consensus         1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~~~g-----~~i~v~d~~~--~~~~~vDvVf~A~g~   73 (334)
T PRK14874          1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELSFKG-----KELKVEDLTT--FDFSGVDIALFSAGG   73 (334)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeeeeCC-----ceeEEeeCCH--HHHcCCCEEEECCCh
Confidence            47999999999999999999999876   5588877765544332111     1112222221  234689999988764

>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.97  E-value=7.5e-05  Score=67.07  Aligned_cols=70  Identities=23%  Similarity=0.303  Sum_probs=44.6

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCC---EEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNH---QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      +|++|+|+||||++|+.|++.|.+++|   ++..+....+....+...     ...+++.+.+...  ++++|+||.+++
T Consensus         3 ~~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~~~aG~~l~~~-----~~~l~~~~~~~~~--~~~vD~vFla~p   75 (336)
T PRK05671          3 QPLDIAVVGATGTVGEALVQILEERDFPVGTLHLLASSESAGHSVPFA-----GKNLRVREVDSFD--FSQVQLAFFAAG   75 (336)
T ss_pred             CCCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECcccCCCeeccC-----CcceEEeeCChHH--hcCCCEEEEcCC
Confidence            457999999999999999999998766   444444333222222111     1224554444332  578999998765

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=97.95  E-value=0.00011  Score=65.70  Aligned_cols=104  Identities=16%  Similarity=0.224  Sum_probs=71.4

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCC-------EEEEEeCCCCc--ccccCCCCC--c-cccCcccccCcchHHhhccCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNH-------QVRVLTRSRSK--AELIFPGKK--T-RFFPGVMIAEEPQWRDCIQGS  117 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~--~~~~~~~~~--~-~~~~~~d~~~~~~~~~~~~~~  117 (363)
                      +.||.|+|++|++|++++-.|+..|.       ++..+++....  .........  . .......+.  ....+.++++
T Consensus         3 p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~--~~~~~~~~da   80 (323)
T TIGR01759         3 PVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVAT--TDPEEAFKDV   80 (323)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEEe--cChHHHhCCC
Confidence            46999999999999999999998873       79999886522  211110000  0 001111222  2334678899


Q ss_pred             CEEEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhC
Q 017977          118 TAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES  158 (363)
Q Consensus       118 d~Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  158 (363)
                      |+||.+||.+..   ......+.+..|..-.+.+.+.+.+.
T Consensus        81 DvVVitAG~~~k---~g~tR~dll~~Na~i~~~i~~~i~~~  118 (323)
T TIGR01759        81 DAALLVGAFPRK---PGMERADLLSKNGKIFKEQGKALNKV  118 (323)
T ss_pred             CEEEEeCCCCCC---CCCcHHHHHHHHHHHHHHHHHHHHhh
Confidence            999999997532   23456789999999999999999993

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=97.95  E-value=0.00012  Score=65.03  Aligned_cols=108  Identities=18%  Similarity=0.224  Sum_probs=74.4

Q ss_pred             EEEEecCcchHHHHHHHHHHhCCC--EEEEEeCCCCcccccCCCCCccccCcccccC---cchHHhhccCCCEEEEccCC
Q 017977           52 TVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGKKTRFFPGVMIAE---EPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        52 ~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~---~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      ||.|+|++|.+|.+++-.|+..+.  ++..+++++.....+-....   .....+..   .+++.+.++++|+||-+||.
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a~g~a~DL~~~---~~~~~i~~~~~~~~~~~~~~daDivvitaG~   77 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGAAGVAADLSHI---PTAASVKGFSGEEGLENALKGADVVVIPAGV   77 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCCCcEEEchhhcC---CcCceEEEecCCCchHHHcCCCCEEEEeCCC
Confidence            589999999999999999988874  89999987732221111100   11123321   23456789999999999997


Q ss_pred             CCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEE
Q 017977          127 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVL  167 (363)
Q Consensus       127 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~  167 (363)
                      +..   ......+.+..|..-.+.+.+.+.+  .+.+.+++
T Consensus        78 ~~~---~g~~R~dll~~N~~I~~~i~~~i~~--~~p~~iii  113 (312)
T TIGR01772        78 PRK---PGMTRDDLFNVNAGIVKDLVAAVAE--SCPKAMIL  113 (312)
T ss_pred             CCC---CCccHHHHHHHhHHHHHHHHHHHHH--hCCCeEEE
Confidence            533   2334678899999999999999998  44443333

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.94  E-value=5.3e-06  Score=64.47  Aligned_cols=76  Identities=18%  Similarity=0.182  Sum_probs=57.9

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCE-EEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQ-VRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      ...++|+|+|+ |..|+.++..|.+.|.+ |+++.|+.++.+.+.....   ...+.+.+.+++.+.+.++|+||++.+.
T Consensus        10 l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~---~~~~~~~~~~~~~~~~~~~DivI~aT~~   85 (135)
T PF01488_consen   10 LKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFG---GVNIEAIPLEDLEEALQEADIVINATPS   85 (135)
T ss_dssp             GTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHT---GCSEEEEEGGGHCHHHHTESEEEE-SST
T ss_pred             cCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcC---ccccceeeHHHHHHHHhhCCeEEEecCC
Confidence            34579999996 99999999999999975 9999999887665543211   1234556667777888999999999876


Q ss_pred             C
Q 017977          127 P  127 (363)
Q Consensus       127 ~  127 (363)
                      +
T Consensus        86 ~   86 (135)
T PF01488_consen   86 G   86 (135)
T ss_dssp             T
T ss_pred             C
Confidence            4

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=97.94  E-value=0.0011  Score=54.71  Aligned_cols=221  Identities=10%  Similarity=0.021  Sum_probs=121.0

Q ss_pred             CCccEEEEecCc--chHHHHHHHHHHhCCCEEEEEeCCCCc---ccccCCCCCccccCcccccCcchHHhhcc-------
Q 017977           48 ASQMTVSVTGAT--GFIGRRLVQRLQADNHQVRVLTRSRSK---AELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------  115 (363)
Q Consensus        48 ~~~~~vlVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~---~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------  115 (363)
                      ..+|++||+|-.  .-|+..|++.|.++|.++......+.-   ..++.+.........+|+.+.+++...+.       
T Consensus         4 L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~~g   83 (259)
T COG0623           4 LEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKKKWG   83 (259)
T ss_pred             cCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHHhhC
Confidence            346899999975  469999999999999998888766522   22333332222245689999888877764       


Q ss_pred             CCCEEEEccCCCCC----CC---CChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCc
Q 017977          116 GSTAVVNLAGTPIG----TR---WSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLS  188 (363)
Q Consensus       116 ~~d~Vi~~a~~~~~----~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~  188 (363)
                      +.|.++|+.+....    ..   .+.+.....+++...+...+.++++.+..+...+|-++=    +|    .|.  ..|
T Consensus        84 ~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtY----lg----s~r--~vP  153 (259)
T COG0623          84 KLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTY----LG----SER--VVP  153 (259)
T ss_pred             cccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEe----cc----cee--ecC
Confidence            57999999987432    11   223344445556666666777777776333333443332    22    121  123


Q ss_pred             chhhhhhhcccchhhHHHHHHHHHHHhcc---CCCceEEEEeeceEEeCCCCcccchHHHHHHH-hCCCCCCCCCccccc
Q 017977          189 DYCAKVYCLVSFNRGVLVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMF-AGGPLGSGQQWFSWI  264 (363)
Q Consensus       189 ~~~~~~~~~~~y~~~k~~~~~~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i  264 (363)
                      .|..-       +..| ...+........   ..|+++.-+--|.|-.-.......+...+... ...|+      +.-+
T Consensus       154 nYNvM-------GvAK-AaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI~~f~~~l~~~e~~aPl------~r~v  219 (259)
T COG0623         154 NYNVM-------GVAK-AALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGIGDFRKMLKENEANAPL------RRNV  219 (259)
T ss_pred             CCchh-------HHHH-HHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhccccHHHHHHHHHhhCCc------cCCC
Confidence            44321       1111 111111111111   12777777766655332111111222222211 12222      2356


Q ss_pred             cHHHHHHHHHHHhcCCC---CCceEEeeCCC
Q 017977          265 HLDDIVNLIYEALSNPS---YRGVINGTAPN  292 (363)
Q Consensus       265 ~v~D~a~a~~~~~~~~~---~~g~~~i~~~~  292 (363)
                      ..+||+.....++..-.   .+.+.++.+|-
T Consensus       220 t~eeVG~tA~fLlSdLssgiTGei~yVD~G~  250 (259)
T COG0623         220 TIEEVGNTAAFLLSDLSSGITGEIIYVDSGY  250 (259)
T ss_pred             CHHHhhhhHHHHhcchhcccccceEEEcCCc
Confidence            79999999888886543   34477777763

>PRK05442 malate dehydrogenase; Provisional

Probab=97.92  E-value=0.00013  Score=65.33  Aligned_cols=106  Identities=20%  Similarity=0.277  Sum_probs=72.0

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCC-------EEEEEeCCCCc--ccccCCCCCc---cccCcccccCcchHHhhcc
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNH-------QVRVLTRSRSK--AELIFPGKKT---RFFPGVMIAEEPQWRDCIQ  115 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~--~~~~~~~~~~---~~~~~~d~~~~~~~~~~~~  115 (363)
                      .+++||.|+|++|.+|..++-.|+..|.       ++..+++++..  ..........   .......+.  ....+.++
T Consensus         2 ~~~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i~--~~~y~~~~   79 (326)
T PRK05442          2 KAPVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVIT--DDPNVAFK   79 (326)
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEEe--cChHHHhC
Confidence            3457999999999999999999988663       78999886532  2111110000   000112222  23346788


Q ss_pred             CCCEEEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhC
Q 017977          116 GSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES  158 (363)
Q Consensus       116 ~~d~Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  158 (363)
                      ++|+||-+||.+..   ......+.+..|..-.+.+.+.+.+.
T Consensus        80 daDiVVitaG~~~k---~g~tR~dll~~Na~i~~~i~~~i~~~  119 (326)
T PRK05442         80 DADVALLVGARPRG---PGMERKDLLEANGAIFTAQGKALNEV  119 (326)
T ss_pred             CCCEEEEeCCCCCC---CCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999997532   23456789999999999999999983

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=97.91  E-value=4.4e-05  Score=58.35  Aligned_cols=73  Identities=14%  Similarity=0.182  Sum_probs=45.1

Q ss_pred             cEEEEecCcchHHHHHHHHHHh-CCCEEEEE-eCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEcc
Q 017977           51 MTVSVTGATGFIGRRLVQRLQA-DNHQVRVL-TRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA  124 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~-~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a  124 (363)
                      |||+|.|++|.+|+.+++.+.+ .++++.+. +|++++... .............+.-.++++++++.+|+||.+.
T Consensus         1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g-~d~g~~~~~~~~~~~v~~~l~~~~~~~DVvIDfT   75 (124)
T PF01113_consen    1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVG-KDVGELAGIGPLGVPVTDDLEELLEEADVVIDFT   75 (124)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTT-SBCHHHCTSST-SSBEBS-HHHHTTH-SEEEEES
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCccccc-chhhhhhCcCCcccccchhHHHhcccCCEEEEcC
Confidence            6899999999999999999998 67886665 454422111 0000000001122223467888888899999887

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.87  E-value=1.5e-05  Score=68.98  Aligned_cols=76  Identities=16%  Similarity=0.201  Sum_probs=61.2

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  127 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~~  127 (363)
                      ..++|-||+||.|..++++|+.+|.+-....|+..+...+....... +....+.+++.+++.+.+..+|+||+|..
T Consensus         7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~~-~~~~p~~~p~~~~~~~~~~~VVlncvGPy   82 (382)
T COG3268           7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGPE-AAVFPLGVPAALEAMASRTQVVLNCVGPY   82 (382)
T ss_pred             eeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCcc-ccccCCCCHHHHHHHHhcceEEEeccccc
Confidence            47999999999999999999999999988899988876544332211 33355556889999999999999999974

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.87  E-value=0.0001  Score=65.83  Aligned_cols=110  Identities=20%  Similarity=0.257  Sum_probs=74.6

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCC--CEEEEEeCCCCcccccCCCCCccc---cCcccccCcchHHhhccCCCEEEEccC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPGKKTRF---FPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~---~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      +||.|+|+ |.+|+.++..|+..|  ++|.+++|+...............   .....+. ...+. .+.++|+||.++|
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~-~~~~~-~l~~aDIVIitag   77 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIK-AGDYS-DCKDADIVVITAG   77 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEE-cCCHH-HhCCCCEEEEccC
Confidence            37999995 999999999999998  689999998876543322110000   0011121 12333 4689999999999


Q ss_pred             CCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEE
Q 017977          126 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLE  168 (363)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~  168 (363)
                      .+..   ......+.+..|..-.+.+.+.+.+  ...+.+|++
T Consensus        78 ~~~~---~g~~R~dll~~N~~i~~~~~~~i~~--~~~~~~viv  115 (306)
T cd05291          78 APQK---PGETRLDLLEKNAKIMKSIVPKIKA--SGFDGIFLV  115 (306)
T ss_pred             CCCC---CCCCHHHHHHHHHHHHHHHHHHHHH--hCCCeEEEE
Confidence            7533   2334678899999999999999998  443434433

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=97.85  E-value=0.00014  Score=64.95  Aligned_cols=111  Identities=18%  Similarity=0.228  Sum_probs=75.3

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCC--EEEEEeCCCCcccccCCCCCc--cccCcccccCcchHHhhccCCCEEEEccC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGKKT--RFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      .+||.|+|+ |.+|..++-.|+..|.  ++..++++.............  .......+. .+.+ +.++++|+||.+||
T Consensus         6 ~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~-~~~~-~~~~~adivIitag   82 (315)
T PRK00066          6 HNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIY-AGDY-SDCKDADLVVITAG   82 (315)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEE-eCCH-HHhCCCCEEEEecC
Confidence            369999997 9999999999999886  899999977653222111000  001122333 2334 34799999999999


Q ss_pred             CCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEE
Q 017977          126 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLE  168 (363)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~  168 (363)
                      .+..   ......+.+..|..-.+.+++.+.+  .+.+.++++
T Consensus        83 ~~~k---~g~~R~dll~~N~~i~~~i~~~i~~--~~~~~~viv  120 (315)
T PRK00066         83 APQK---PGETRLDLVEKNLKIFKSIVGEVMA--SGFDGIFLV  120 (315)
T ss_pred             CCCC---CCCCHHHHHHHHHHHHHHHHHHHHH--hCCCeEEEE
Confidence            8533   2234578899999999999999998  444444433

>PF08338 DUF1731: Domain of unknown function (DUF1731); InterPro: IPR013549 This domain of unknown function appears towards the C terminus of proteins of the NAD dependent epimerase/dehydratase family (IPR001509 from INTERPRO) in bacteria, eukaryotes and archaea

Probab=97.83  E-value=9.3e-06  Score=50.02  Aligned_cols=48  Identities=46%  Similarity=0.780  Sum_probs=25.2

Q ss_pred             CcHHHHHHHhccCceeeecCcccChhhHHHcCCCcccccHHHHHHHHh
Q 017977          315 VPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIM  362 (363)
Q Consensus       315 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~p~~~~~~~~l~~~~  362 (363)
                      +|.|..+.++|++...++.++++.+.|+.+.||+++|+++++++++++
T Consensus         1 vP~~~lkl~lGe~a~lll~~q~v~P~kL~~~GF~F~~p~l~~AL~~ll   48 (48)
T PF08338_consen    1 VPAFALKLLLGEMAELLLASQRVSPKKLLEAGFQFRYPTLEEALRDLL   48 (48)
T ss_dssp             -------------GGGGG-EEEE--HHHHHTT---S-SSHHHHHHH--
T ss_pred             CCHHHHHHHHHHHHHHHhCCCeecChHHHHCCCcccCCCHHHHHhccC
Confidence            477888888999999999999999999999999999999999999875

Many of the proteins in which it is found are involved in cell-division inhibition. ; PDB: 3OH8_A.

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=97.83  E-value=1.1e-05  Score=70.39  Aligned_cols=76  Identities=20%  Similarity=0.290  Sum_probs=60.5

Q ss_pred             EEEEecCcchHHHHHHHHHHh----CCCEEEEEeCCCCcccccCCC--------CCccccCcccccCcchHHhhccCCCE
Q 017977           52 TVSVTGATGFIGRRLVQRLQA----DNHQVRVLTRSRSKAELIFPG--------KKTRFFPGVMIAEEPQWRDCIQGSTA  119 (363)
Q Consensus        52 ~vlVtGatG~iG~~l~~~L~~----~g~~V~~~~r~~~~~~~~~~~--------~~~~~~~~~d~~~~~~~~~~~~~~d~  119 (363)
                      .++|.|||||.|.++++++++    .|...-+..|+..+..+.++.        ........+|..|++++.+..+.+.+
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~~~v   86 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQARV   86 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhhhEE
Confidence            699999999999999999998    688899999998775443211        11111334788899999999999999


Q ss_pred             EEEccCCC
Q 017977          120 VVNLAGTP  127 (363)
Q Consensus       120 Vi~~a~~~  127 (363)
                      |+||+|+.
T Consensus        87 ivN~vGPy   94 (423)
T KOG2733|consen   87 IVNCVGPY   94 (423)
T ss_pred             EEeccccc
Confidence            99999963

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=97.82  E-value=7.2e-05  Score=63.48  Aligned_cols=75  Identities=23%  Similarity=0.384  Sum_probs=59.1

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhh-ccCCCEEEEccCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC-IQGSTAVVNLAGT  126 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~d~Vi~~a~~  126 (363)
                      |+++|.|+ |.+|+.+++.|.+.||+|.++++++.................+|-++.+.++++ ++++|+++-+.+.
T Consensus         1 m~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~~   76 (225)
T COG0569           1 MKIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAATGN   76 (225)
T ss_pred             CEEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEeeCC
Confidence            68999995 999999999999999999999999988665333211112344688899999887 7899999977664

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=97.80  E-value=0.00017  Score=65.45  Aligned_cols=74  Identities=16%  Similarity=0.220  Sum_probs=46.3

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhC-CCEEEEEeCCCCcccccCCCCC-ccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIFPGKK-TRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      |++|+|+||||++|+.+++.|.++ ++++.++.++.+....+..... .......++.+.+..  .++++|+||.|..
T Consensus         2 m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~--~~~~vD~Vf~alP   77 (343)
T PRK00436          2 MIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSSAGKPLSDVHPHLRGLVDLVLEPLDPE--ILAGADVVFLALP   77 (343)
T ss_pred             CeEEEEECCCCHHHHHHHHHHHcCCCceEEEEECccccCcchHHhCcccccccCceeecCCHH--HhcCCCEEEECCC
Confidence            579999999999999999999986 6788887764433222211100 000112233333332  4578999998765

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=97.80  E-value=8.8e-05  Score=56.47  Aligned_cols=72  Identities=21%  Similarity=0.296  Sum_probs=41.9

Q ss_pred             EEEEecCcchHHHHHHHHHHhCC-CEEEEE-eCCCCcccccCCCCC-ccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           52 TVSVTGATGFIGRRLVQRLQADN-HQVRVL-TRSRSKAELIFPGKK-TRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        52 ~vlVtGatG~iG~~l~~~L~~~g-~~V~~~-~r~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      ||.|+||||++|+.|++.|.++. +++..+ .++.+....+..... ......+.+.+  .-.+.+.++|+||.|.+
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dvvf~a~~   75 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVED--ADPEELSDVDVVFLALP   75 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEE--TSGHHHTTESEEEE-SC
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEee--cchhHhhcCCEEEecCc
Confidence            69999999999999999999964 465554 444423322221110 00011222223  22334589999998875

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>PRK06223 malate dehydrogenase; Reviewed

Probab=97.79  E-value=0.00026  Score=63.39  Aligned_cols=113  Identities=17%  Similarity=0.167  Sum_probs=73.5

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCC-EEEEEeCCCCcccccCC---CCCccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFP---GKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      ||||.|+|+ |.+|..++..++..|. +|++++++++.......   ...........+....++ +.++++|+||.+++
T Consensus         2 ~~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~-~~~~~aDiVii~~~   79 (307)
T PRK06223          2 RKKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITGTNDY-EDIAGSDVVVITAG   79 (307)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEeCCCH-HHHCCCCEEEECCC
Confidence            479999998 9999999999998875 99999997755322111   000000111222222334 45789999999998


Q ss_pred             CCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCC-eEEEe
Q 017977          126 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRP-SVLEL  169 (363)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~v~~S  169 (363)
                      .+...   .....+.+..|+...+.+++.+.+  ...+. +|.++
T Consensus        80 ~p~~~---~~~r~~~~~~n~~i~~~i~~~i~~--~~~~~~viv~t  119 (307)
T PRK06223         80 VPRKP---GMSRDDLLGINAKIMKDVAEGIKK--YAPDAIVIVVT  119 (307)
T ss_pred             CCCCc---CCCHHHHHHHHHHHHHHHHHHHHH--HCCCeEEEEec
Confidence            75332   223456777888888899998888  33333 44444

>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]

Probab=97.77  E-value=0.00028  Score=59.75  Aligned_cols=114  Identities=16%  Similarity=0.149  Sum_probs=72.9

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCC--CEEEEEeCCCCc--ccccCCCCCccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSK--AELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~--~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      +-||.|.||.|.||+.|.-.|....  -+....+....+  ...+.....  ...-..+.-.+.++++++++|+|+--||
T Consensus        28 ~~KVAvlGAaGGIGQPLSLLlK~np~Vs~LaLYDi~~~~GVaaDlSHI~T--~s~V~g~~g~~~L~~al~~advVvIPAG  105 (345)
T KOG1494|consen   28 GLKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIANTPGVAADLSHINT--NSSVVGFTGADGLENALKGADVVVIPAG  105 (345)
T ss_pred             cceEEEEecCCccCccHHHHHhcCcccceeeeeecccCCcccccccccCC--CCceeccCChhHHHHHhcCCCEEEecCC
Confidence            3599999999999999887666432  133333333222  111111000  0111344456799999999999999999


Q ss_pred             CCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEe
Q 017977          126 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLEL  169 (363)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~S  169 (363)
                      .+-.   .-...++.|++|..-.+.|..++.++ .....+.++|
T Consensus       106 VPRK---PGMTRDDLFn~NAgIv~~l~~aia~~-cP~A~i~vIs  145 (345)
T KOG1494|consen  106 VPRK---PGMTRDDLFNINAGIVKTLAAAIAKC-CPNALILVIS  145 (345)
T ss_pred             CCCC---CCCcHHHhhhcchHHHHHHHHHHHhh-CccceeEeec
Confidence            8633   33345789999999999999999984 1222244555

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=97.75  E-value=0.00047  Score=60.67  Aligned_cols=113  Identities=21%  Similarity=0.262  Sum_probs=75.7

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCC--CEEEEEeCCCCcccccCCCCCccc-c--CcccccCcchHHhhccCCCEEEEccC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPGKKTRF-F--PGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~-~--~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      |||.|+|+ |+||+.++-.|+.++  .++..+++................ .  ....+..... .+.++++|+|+-+||
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~~~-y~~~~~aDiVvitAG   78 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGDGD-YEDLKGADIVVITAG   78 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecCCC-hhhhcCCCEEEEeCC
Confidence            58999999 999999999998775  489999998443322111110000 1  1122323222 456889999999999


Q ss_pred             CCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEec
Q 017977          126 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELV  170 (363)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS  170 (363)
                      .+-.   ......+.++.|..-.+.+.+.+.+  ...+.++++-|
T Consensus        79 ~prK---pGmtR~DLl~~Na~I~~~i~~~i~~--~~~d~ivlVvt  118 (313)
T COG0039          79 VPRK---PGMTRLDLLEKNAKIVKDIAKAIAK--YAPDAIVLVVT  118 (313)
T ss_pred             CCCC---CCCCHHHHHHhhHHHHHHHHHHHHh--hCCCeEEEEec
Confidence            8633   2334678999999999999999999  44444554443

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=97.73  E-value=0.00014  Score=65.02  Aligned_cols=75  Identities=19%  Similarity=0.135  Sum_probs=50.0

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccC-----------CCCCcc----ccCcccccCcchHHhhc
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF-----------PGKKTR----FFPGVMIAEEPQWRDCI  114 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----------~~~~~~----~~~~~d~~~~~~~~~~~  114 (363)
                      +|+|.|+| .|.+|..++..|++.|++|++++|++...+...           ......    ...-..+.-..++.+++
T Consensus         2 ~~~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~i~~~~~~~~a~   80 (308)
T PRK06129          2 MGSVAIIG-AGLIGRAWAIVFARAGHEVRLWDADPAAAAAAPAYIAGRLEDLAAFDLLDGEAPDAVLARIRVTDSLADAV   80 (308)
T ss_pred             CcEEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCchhhHHHHhcCeEEECcHHHhh
Confidence            36899999 799999999999999999999999876443211           110000    00000111223566778


Q ss_pred             cCCCEEEEccC
Q 017977          115 QGSTAVVNLAG  125 (363)
Q Consensus       115 ~~~d~Vi~~a~  125 (363)
                      +++|+|+.+..
T Consensus        81 ~~ad~Vi~avp   91 (308)
T PRK06129         81 ADADYVQESAP   91 (308)
T ss_pred             CCCCEEEECCc
Confidence            89999998874

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=97.72  E-value=0.00046  Score=59.97  Aligned_cols=67  Identities=18%  Similarity=0.305  Sum_probs=47.5

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhC-CCEEEEEe-CCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQAD-NHQVRVLT-RSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      ||+|.|+|++|.+|+.+++.+.+. +.++.++. +++......         ...++...+++.++++++|+||.++.
T Consensus         1 ~mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~~~---------~~~~i~~~~dl~~ll~~~DvVid~t~   69 (257)
T PRK00048          1 MIKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLVGQ---------GALGVAITDDLEAVLADADVLIDFTT   69 (257)
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcccccc---------CCCCccccCCHHHhccCCCEEEECCC
Confidence            479999999999999999998864 68887754 444332221         11234445667777778999998884

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=97.68  E-value=0.00037  Score=62.13  Aligned_cols=111  Identities=14%  Similarity=0.174  Sum_probs=73.8

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCC--CEEEEEeCCCCcccccCCCCCc-cccC-cccccCcchHHhhccCCCEEEEccC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPGKKT-RFFP-GVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~-~~~~-~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      .+||.|+|+ |.+|..++-.|+..|  -++..++++............. ..+. ...+....+++. ++++|+||-+||
T Consensus         3 ~~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~~dy~~-~~~adivvitaG   80 (312)
T cd05293           3 RNKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEADKDYSV-TANSKVVIVTAG   80 (312)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEECCCHHH-hCCCCEEEECCC
Confidence            369999996 999999999998877  4899999877543221110000 0011 113332344553 799999999999


Q ss_pred             CCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEE
Q 017977          126 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVL  167 (363)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~  167 (363)
                      .+..   ......+.+..|..-.+.+.+.+.+  .+.+.+++
T Consensus        81 ~~~k---~g~~R~dll~~N~~i~~~~~~~i~~--~~p~~~vi  117 (312)
T cd05293          81 ARQN---EGESRLDLVQRNVDIFKGIIPKLVK--YSPNAILL  117 (312)
T ss_pred             CCCC---CCCCHHHHHHHHHHHHHHHHHHHHH--hCCCcEEE
Confidence            7532   2234678899999999999999999  44443333

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=97.68  E-value=0.00011  Score=67.22  Aligned_cols=103  Identities=14%  Similarity=0.169  Sum_probs=68.6

Q ss_pred             CCccEEEEecC----------------cchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchH-
Q 017977           48 ASQMTVSVTGA----------------TGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW-  110 (363)
Q Consensus        48 ~~~~~vlVtGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~-  110 (363)
                      ..+++|+||||                ||.+|.+++++|.++|++|+.+.+......  ...     ...+|+.+.+++ 
T Consensus       183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~~--~~~-----~~~~~v~~~~~~~  255 (390)
T TIGR00521       183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLLT--PPG-----VKSIKVSTAEEML  255 (390)
T ss_pred             cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccCC--CCC-----cEEEEeccHHHHH
Confidence            45679999999                467999999999999999999987664321  111     234677777666 


Q ss_pred             Hhhc----cCCCEEEEccCCCCCCCCC---hhhH--HHHHHHHHHHHHHHHHHHHh
Q 017977          111 RDCI----QGSTAVVNLAGTPIGTRWS---SEIK--KEIKESRIRVTSKVVDLINE  157 (363)
Q Consensus       111 ~~~~----~~~d~Vi~~a~~~~~~~~~---~~~~--~~~~~~n~~~~~~l~~~~~~  157 (363)
                      +.++    .++|++|++||..-.....   ....  ...+..|+..+..++..+.+
T Consensus       256 ~~~~~~~~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~~  311 (390)
T TIGR00521       256 EAALNELAKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVRK  311 (390)
T ss_pred             HHHHHhhcccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHHHh
Confidence            4333    4689999999974221111   0001  12234666777788888876

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>PLN02602 lactate dehydrogenase

Probab=97.66  E-value=0.00065  Score=61.41  Aligned_cols=102  Identities=17%  Similarity=0.270  Sum_probs=70.1

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCC--EEEEEeCCCCcccccCCCCC--ccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGKK--TRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      +||.|+|+ |.+|..++-.|+..|.  ++..++.+............  ........+....+++ .++++|+||-+||.
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i~~~~dy~-~~~daDiVVitAG~  115 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKILASTDYA-VTAGSDLCIVTAGA  115 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEEEeCCCHH-HhCCCCEEEECCCC
Confidence            69999996 9999999999998773  89999987754322111100  0001112333222343 38899999999997


Q ss_pred             CCCCCCChhhHHHHHHHHHHHHHHHHHHHHh
Q 017977          127 PIGTRWSSEIKKEIKESRIRVTSKVVDLINE  157 (363)
Q Consensus       127 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  157 (363)
                      +..   ......+.+..|+.-.+.+.+.+.+
T Consensus       116 ~~k---~g~tR~dll~~N~~I~~~i~~~I~~  143 (350)
T PLN02602        116 RQI---PGESRLNLLQRNVALFRKIIPELAK  143 (350)
T ss_pred             CCC---cCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            533   2234578889999999999999998

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=97.65  E-value=0.00028  Score=61.65  Aligned_cols=103  Identities=13%  Similarity=0.138  Sum_probs=71.8

Q ss_pred             EEEecCcchHHHHHHHHHHhCC----CEEEEEeCCCCcccccCCCCCcc-cc-CcccccCcchHHhhccCCCEEEEccCC
Q 017977           53 VSVTGATGFIGRRLVQRLQADN----HQVRVLTRSRSKAELIFPGKKTR-FF-PGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        53 vlVtGatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~-~~-~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      |.|+||+|.+|..++..|+..|    .+|..+++++............. .. ....+.-.++..+.++++|+||.+++.
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~~~d~~~~~~~aDiVv~t~~~   80 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSITDDPYEAFKDADVVIITAGV   80 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEECCchHHHhCCCCEEEECCCC
Confidence            5799999999999999999988    79999999875533221111000 00 112333344566788999999999987


Q ss_pred             CCCCCCChhhHHHHHHHHHHHHHHHHHHHHhC
Q 017977          127 PIGTRWSSEIKKEIKESRIRVTSKVVDLINES  158 (363)
Q Consensus       127 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  158 (363)
                      +..   ...........|+...+.+++.+.+.
T Consensus        81 ~~~---~g~~r~~~~~~n~~i~~~i~~~i~~~  109 (263)
T cd00650          81 GRK---PGMGRLDLLKRNVPIVKEIGDNIEKY  109 (263)
T ss_pred             CCC---cCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            533   22234567788999999999999983

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=97.63  E-value=0.00052  Score=61.32  Aligned_cols=109  Identities=21%  Similarity=0.323  Sum_probs=73.5

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCC--CEEEEEeCCCCcccc----cCCCCCccccCcccccCcchHHhhccCCCEEEEcc
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAEL----IFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA  124 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~----~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a  124 (363)
                      |||.|+|+ |.+|..++..|+..|  .+|.+++++......    +.....  ......+. ..++ +.++++|+||.++
T Consensus         1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~--~~~~~~i~-~~d~-~~l~~aDiViita   75 (308)
T cd05292           1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTP--FVKPVRIY-AGDY-ADCKGADVVVITA   75 (308)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHcccc--ccCCeEEe-eCCH-HHhCCCCEEEEcc
Confidence            58999997 999999999999999  689999998754332    111110  00111122 1233 4588999999999


Q ss_pred             CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEe
Q 017977          125 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLEL  169 (363)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~S  169 (363)
                      +.+..   ......+.+..|+...+.+++.+.+  .+.+-++++-
T Consensus        76 ~~~~~---~~~~r~dl~~~n~~i~~~~~~~l~~--~~~~giiiv~  115 (308)
T cd05292          76 GANQK---PGETRLDLLKRNVAIFKEIIPQILK--YAPDAILLVV  115 (308)
T ss_pred             CCCCC---CCCCHHHHHHHHHHHHHHHHHHHHH--HCCCeEEEEe
Confidence            87532   2234567788899999999999988  4434344444

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=97.61  E-value=7.3e-05  Score=66.12  Aligned_cols=77  Identities=14%  Similarity=0.125  Sum_probs=54.5

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCE-EEEEeCCC---CcccccCCCC----CccccCcccccCcchHHhhccCCCEE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQ-VRVLTRSR---SKAELIFPGK----KTRFFPGVMIAEEPQWRDCIQGSTAV  120 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~---~~~~~~~~~~----~~~~~~~~d~~~~~~~~~~~~~~d~V  120 (363)
                      ..++++|+|| |.+|++++..|.+.|.+ |++++|+.   ++.+.+.+..    .......+|+.+.+++.+.++.+|+|
T Consensus       125 ~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~Dil  203 (289)
T PRK12548        125 KGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSDIL  203 (289)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCCEE
Confidence            4568999998 89999999999999985 99999986   3332221110    00012235666666777778889999


Q ss_pred             EEccCC
Q 017977          121 VNLAGT  126 (363)
Q Consensus       121 i~~a~~  126 (363)
                      ||+...
T Consensus       204 INaTp~  209 (289)
T PRK12548        204 VNATLV  209 (289)
T ss_pred             EEeCCC
Confidence            998765

>PTZ00117 malate dehydrogenase; Provisional

Probab=97.60  E-value=0.00074  Score=60.59  Aligned_cols=114  Identities=15%  Similarity=0.114  Sum_probs=75.9

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCC-CEEEEEeCCCCcccccCC---CCCccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFP---GKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      .+||.|+|| |.+|..++..|+..| .++..++++.+.......   ...........+....+++ .++++|+||.+++
T Consensus         5 ~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~~~d~~-~l~~ADiVVitag   82 (319)
T PTZ00117          5 RKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILGTNNYE-DIKDSDVVVITAG   82 (319)
T ss_pred             CcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEeCCCHH-HhCCCCEEEECCC
Confidence            469999997 999999999999888 689999998754321110   0000001112333334565 7799999999998


Q ss_pred             CCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCC-eEEEec
Q 017977          126 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRP-SVLELV  170 (363)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~v~~SS  170 (363)
                      .+...   .....+.+..|..-.+.+++.+.+  ...+. ++++|-
T Consensus        83 ~~~~~---g~~r~dll~~n~~i~~~i~~~i~~--~~p~a~vivvsN  123 (319)
T PTZ00117         83 VQRKE---EMTREDLLTINGKIMKSVAESVKK--YCPNAFVICVTN  123 (319)
T ss_pred             CCCCC---CCCHHHHHHHHHHHHHHHHHHHHH--HCCCeEEEEecC
Confidence            75332   223567888899888899999988  44444 555543

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=97.57  E-value=0.00044  Score=62.78  Aligned_cols=98  Identities=13%  Similarity=0.163  Sum_probs=57.0

Q ss_pred             cEEEEecCcchHHHHHHHHHHhC-CCEEEEE-eCCCCcccccCCCCC-ccccCcccccCcchHHhhccCCCEEEEccCCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQAD-NHQVRVL-TRSRSKAELIFPGKK-TRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  127 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~~  127 (363)
                      |+|.|+||||++|+.+++.|.++ ++++..+ +++.+....+..... .......++.+. +..++++++|+||.|....
T Consensus         1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~sagk~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~DvVf~alP~~   79 (346)
T TIGR01850         1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRESAGKPVSEVHPHLRGLVDLNLEPI-DEEEIAEDADVVFLALPHG   79 (346)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchhcCCChHHhCccccccCCceeecC-CHHHhhcCCCEEEECCCch
Confidence            58999999999999999999986 5688854 544322221111000 000111223222 2344446899999887541


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEecc
Q 017977          128 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVK  171 (363)
Q Consensus       128 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~  171 (363)
                                         ....++..+.+  .+ +++|=.|+.
T Consensus        80 -------------------~s~~~~~~~~~--~G-~~VIDlS~~  101 (346)
T TIGR01850        80 -------------------VSAELAPELLA--AG-VKVIDLSAD  101 (346)
T ss_pred             -------------------HHHHHHHHHHh--CC-CEEEeCChh
Confidence                               22356666655  45 446767765

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]

Probab=97.56  E-value=5.9e-05  Score=61.89  Aligned_cols=78  Identities=24%  Similarity=0.369  Sum_probs=46.1

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCc-----------ccccCcchHHhhccCCCE
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPG-----------VMIAEEPQWRDCIQGSTA  119 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-----------~d~~~~~~~~~~~~~~d~  119 (363)
                      |||.|+| .||+|..++..|.+.||+|++++.++...+.+........-.+           ..+.-..++.+++.++|+
T Consensus         1 M~I~ViG-lGyvGl~~A~~lA~~G~~V~g~D~~~~~v~~l~~g~~p~~E~~l~~ll~~~~~~~~l~~t~~~~~ai~~adv   79 (185)
T PF03721_consen    1 MKIAVIG-LGYVGLPLAAALAEKGHQVIGVDIDEEKVEALNNGELPIYEPGLDELLKENVSAGRLRATTDIEEAIKDADV   79 (185)
T ss_dssp             -EEEEE---STTHHHHHHHHHHTTSEEEEE-S-HHHHHHHHTTSSSS-CTTHHHHHHHHHHTTSEEEESEHHHHHHH-SE
T ss_pred             CEEEEEC-CCcchHHHHHHHHhCCCEEEEEeCChHHHHHHhhccccccccchhhhhccccccccchhhhhhhhhhhccce
Confidence            7999998 7999999999999999999999999876555433221000001           122223455566778899


Q ss_pred             EEEccCCCCC
Q 017977          120 VVNLAGTPIG  129 (363)
Q Consensus       120 Vi~~a~~~~~  129 (363)
                      +|-|.+.+..
T Consensus        80 ~~I~VpTP~~   89 (185)
T PF03721_consen   80 VFICVPTPSD   89 (185)
T ss_dssp             EEE----EBE
T ss_pred             EEEecCCCcc
Confidence            9988876533

The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent

Probab=97.56  E-value=0.0011  Score=59.11  Aligned_cols=102  Identities=20%  Similarity=0.216  Sum_probs=69.5

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCC-EEEEEeCCCCccccc----CCCCCccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELI----FPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      |||.|+|+ |++|..++..|+..|+ +|+++++........    ..... .......+.-..++.+ +.++|+||-+++
T Consensus         2 ~KV~VIGa-G~vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~~~~~-~~~~~~~i~~t~d~~~-~~~aDiVIitag   78 (305)
T TIGR01763         2 KKISVIGA-GFVGATTAFRLAEKELADLVLLDVVEGIPQGKALDMYEASP-VGGFDTKVTGTNNYAD-TANSDIVVITAG   78 (305)
T ss_pred             CEEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhhhhhh-ccCCCcEEEecCCHHH-hCCCCEEEEcCC
Confidence            68999996 9999999999999886 899999865432211    11100 0001112322244554 688999999999


Q ss_pred             CCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhC
Q 017977          126 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINES  158 (363)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  158 (363)
                      .+...   .....+.+..|....+.+++.+.+.
T Consensus        79 ~p~~~---~~sR~~l~~~N~~iv~~i~~~I~~~  108 (305)
T TIGR01763        79 LPRKP---GMSREDLLSMNAGIVREVTGRIMEH  108 (305)
T ss_pred             CCCCc---CCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            75332   2245678889999999999998883

The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=97.53  E-value=0.0013  Score=58.95  Aligned_cols=118  Identities=13%  Similarity=0.089  Sum_probs=75.3

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCC-EEEEEeCCCCcccccC----CCCCccccCcccccCcchHHhhccCCCEEEE
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQGSTAVVN  122 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~  122 (363)
                      ..++||.|+| +|.+|..++..++..|. +|..++++++......    .... .......+.-..++ +.++++|+||.
T Consensus         4 ~~~~KI~IIG-aG~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~-~~~~~~~I~~~~d~-~~l~~aDiVI~   80 (321)
T PTZ00082          4 IKRRKISLIG-SGNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNV-IAGSNSKVIGTNNY-EDIAGSDVVIV   80 (321)
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhh-ccCCCeEEEECCCH-HHhCCCCEEEE
Confidence            3456999999 59999999999998885 8999999887532110    0000 00001223322345 46799999999


Q ss_pred             ccCCCCCCCC--ChhhHHHHHHHHHHHHHHHHHHHHhCCCCCC-CeEEEec
Q 017977          123 LAGTPIGTRW--SSEIKKEIKESRIRVTSKVVDLINESPEGVR-PSVLELV  170 (363)
Q Consensus       123 ~a~~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~v~~SS  170 (363)
                      +++.+.....  .+....+.+..|+.-.+.+++.+.+  ...+ .++.+|-
T Consensus        81 tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~--~~p~a~~iv~sN  129 (321)
T PTZ00082         81 TAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKK--YCPNAFVIVITN  129 (321)
T ss_pred             CCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHH--HCCCeEEEEecC
Confidence            9987532111  0003467778899888999999988  3433 3555553

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=97.51  E-value=0.0014  Score=60.76  Aligned_cols=103  Identities=17%  Similarity=0.232  Sum_probs=72.1

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhC-------CC--EEEEEeCCCCcccccCCCCCccc--c-CcccccCcchHHhhccCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQAD-------NH--QVRVLTRSRSKAELIFPGKKTRF--F-PGVMIAEEPQWRDCIQGS  117 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~-------g~--~V~~~~r~~~~~~~~~~~~~~~~--~-~~~d~~~~~~~~~~~~~~  117 (363)
                      .-||.|+|++|.+|.+++-.|+..       |.  ++..++++.+.............  + ..+.+.. +. .+.++++
T Consensus       100 ~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~~-~~-ye~~kda  177 (444)
T PLN00112        100 LINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIGI-DP-YEVFQDA  177 (444)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEec-CC-HHHhCcC
Confidence            358999999999999999999987       54  78888988776443211110000  1 1112111 22 3568899


Q ss_pred             CEEEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHh
Q 017977          118 TAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINE  157 (363)
Q Consensus       118 d~Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  157 (363)
                      |+||-.||.+..   ......+.++.|..-.+.+.+.+.+
T Consensus       178 DiVVitAG~prk---pG~tR~dLl~~N~~I~k~i~~~I~~  214 (444)
T PLN00112        178 EWALLIGAKPRG---PGMERADLLDINGQIFAEQGKALNE  214 (444)
T ss_pred             CEEEECCCCCCC---CCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            999999998533   2334678999999999999999988

>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.50  E-value=0.00069  Score=61.68  Aligned_cols=37  Identities=35%  Similarity=0.588  Sum_probs=30.9

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCC-EEEEEeCCCCc
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSK   86 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~   86 (363)
                      |++|+|+||||++|+.|++.|.++.. ++.++.++.+.
T Consensus         3 ~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~~~   40 (349)
T PRK08664          3 KLKVGILGATGMVGQRFVQLLANHPWFEVTALAASERS   40 (349)
T ss_pred             CcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcChhh
Confidence            47999999999999999999998754 88888565533

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.49  E-value=0.00029  Score=57.59  Aligned_cols=68  Identities=12%  Similarity=0.231  Sum_probs=39.3

Q ss_pred             EEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchH----HhhccCCCEEEEccCCC
Q 017977           53 VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW----RDCIQGSTAVVNLAGTP  127 (363)
Q Consensus        53 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~----~~~~~~~d~Vi~~a~~~  127 (363)
                      .+=--.||..|.+|++++..+|++|+.+.....- ... ..     ...+++...+++    .+.++++|++||+|+..
T Consensus        22 ~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~~-~~p-~~-----~~~i~v~sa~em~~~~~~~~~~~Di~I~aAAVs   93 (185)
T PF04127_consen   22 FITNRSSGKMGAALAEEAARRGAEVTLIHGPSSL-PPP-PG-----VKVIRVESAEEMLEAVKELLPSADIIIMAAAVS   93 (185)
T ss_dssp             EEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS------TT-----EEEEE-SSHHHHHHHHHHHGGGGSEEEE-SB--
T ss_pred             EecCCCcCHHHHHHHHHHHHCCCEEEEEecCccc-ccc-cc-----ceEEEecchhhhhhhhccccCcceeEEEecchh
Confidence            3333458999999999999999999999987421 111 00     222344444433    34455789999999973

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>PLN02383 aspartate semialdehyde dehydrogenase

Probab=97.46  E-value=0.0011  Score=59.98  Aligned_cols=71  Identities=20%  Similarity=0.312  Sum_probs=42.8

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCC---EEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNH---QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      +.++|.|.||||++|+.|++.|.+++|   ++..+....+........     .....+.+.+  .+.++++|+||.+++
T Consensus         6 ~~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~rsaGk~~~~~-----~~~~~v~~~~--~~~~~~~D~vf~a~p   78 (344)
T PLN02383          6 NGPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASARSAGKKVTFE-----GRDYTVEELT--EDSFDGVDIALFSAG   78 (344)
T ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEccCCCCCeeeec-----CceeEEEeCC--HHHHcCCCEEEECCC
Confidence            346999999999999999999999877   444443332222221111     1111121111  134578999998876


Q ss_pred             C
Q 017977          126 T  126 (363)
Q Consensus       126 ~  126 (363)
                      .
T Consensus        79 ~   79 (344)
T PLN02383         79 G   79 (344)
T ss_pred             c
Confidence            4

>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)

Probab=97.36  E-value=0.00056  Score=61.83  Aligned_cols=68  Identities=22%  Similarity=0.343  Sum_probs=43.9

Q ss_pred             EEEEecCcchHHHHHHHHHHhCCCEEE---EEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           52 TVSVTGATGFIGRRLVQRLQADNHQVR---VLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        52 ~vlVtGatG~iG~~l~~~L~~~g~~V~---~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      +|+|.||||++|+.|++.|.+++|.+.   .+.+..+....+...     .....+.+.+  ...+.++|+||.+++.
T Consensus         1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g~~~~~~-----~~~~~~~~~~--~~~~~~~D~v~~a~g~   71 (339)
T TIGR01296         1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRSAGRKVTFK-----GKELEVNEAK--IESFEGIDIALFSAGG   71 (339)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccccCCCeeeeC-----CeeEEEEeCC--hHHhcCCCEEEECCCH
Confidence            589999999999999999999887644   444655443333211     1111222222  2345789999998875

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.

>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase

Probab=97.36  E-value=0.0013  Score=61.51  Aligned_cols=76  Identities=24%  Similarity=0.426  Sum_probs=52.7

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCc-----------ccccCcchHHhhccCCCE
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPG-----------VMIAEEPQWRDCIQGSTA  119 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-----------~d~~~~~~~~~~~~~~d~  119 (363)
                      |+|.|+| .|++|..++..|.+.||+|+++++++.+.+.+..........+           ..+.-..++.++++++|+
T Consensus         1 mkI~vIG-lG~~G~~lA~~La~~G~~V~~~d~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~g~l~~~~~~~~~~~~adv   79 (411)
T TIGR03026         1 MKIAVIG-LGYVGLPLAALLADLGHEVTGVDIDQEKVDKLNKGKSPIYEPGLDELLAKALAAGRLRATTDYEDAIRDADV   79 (411)
T ss_pred             CEEEEEC-CCchhHHHHHHHHhcCCeEEEEECCHHHHHHhhcCCCCCCCCCHHHHHHHhhhcCCeEEECCHHHHHhhCCE
Confidence            5899999 6999999999999999999999999877655443211000000           012222345667788999


Q ss_pred             EEEccCCC
Q 017977          120 VVNLAGTP  127 (363)
Q Consensus       120 Vi~~a~~~  127 (363)
                      ||-+...+
T Consensus        80 vii~vpt~   87 (411)
T TIGR03026        80 IIICVPTP   87 (411)
T ss_pred             EEEEeCCC
Confidence            99888754

All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.

>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]

Probab=97.34  E-value=0.0013  Score=58.93  Aligned_cols=78  Identities=26%  Similarity=0.416  Sum_probs=56.3

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCccc-----------ccCcchHHhhccCCCE
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVM-----------IAEEPQWRDCIQGSTA  119 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d-----------~~~~~~~~~~~~~~d~  119 (363)
                      |||.|.| +||+|.-.+..|.+.||+|++++.++.+.+.+.....-..-.+++           +.=..++++++++.|+
T Consensus         1 MkI~viG-tGYVGLv~g~~lA~~GHeVv~vDid~~KV~~ln~g~~PI~EpgLe~ll~~~~~~gRl~fTtd~~~a~~~adv   79 (414)
T COG1004           1 MKITVIG-TGYVGLVTGACLAELGHEVVCVDIDESKVELLNKGISPIYEPGLEELLKENLASGRLRFTTDYEEAVKDADV   79 (414)
T ss_pred             CceEEEC-CchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHhCCCCCCcCccHHHHHHhccccCcEEEEcCHHHHHhcCCE
Confidence            7999999 899999999999999999999999988765544332111111111           2223456778889999


Q ss_pred             EEEccCCCCC
Q 017977          120 VVNLAGTPIG  129 (363)
Q Consensus       120 Vi~~a~~~~~  129 (363)
                      +|-+.|-+..
T Consensus        80 ~fIavgTP~~   89 (414)
T COG1004          80 VFIAVGTPPD   89 (414)
T ss_pred             EEEEcCCCCC
Confidence            9998886543

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=97.33  E-value=0.0017  Score=60.60  Aligned_cols=40  Identities=25%  Similarity=0.331  Sum_probs=36.1

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCccccc
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI   90 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~   90 (363)
                      +|+|.|+| .|++|..++..|++.||+|+++++++...+.+
T Consensus         3 ~~kI~VIG-lG~~G~~~A~~La~~G~~V~~~D~~~~~v~~l   42 (415)
T PRK11064          3 FETISVIG-LGYIGLPTAAAFASRQKQVIGVDINQHAVDTI   42 (415)
T ss_pred             ccEEEEEC-cchhhHHHHHHHHhCCCEEEEEeCCHHHHHHH
Confidence            47999999 69999999999999999999999998876654

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=97.32  E-value=0.00018  Score=57.87  Aligned_cols=66  Identities=20%  Similarity=0.229  Sum_probs=50.4

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      ||+|.++| .|-+|+.+++.|++.||+|++.+|++++.+.+...         ...-.++..++++++|+||-+..
T Consensus         1 m~~Ig~IG-lG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~---------g~~~~~s~~e~~~~~dvvi~~v~   66 (163)
T PF03446_consen    1 MMKIGFIG-LGNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEA---------GAEVADSPAEAAEQADVVILCVP   66 (163)
T ss_dssp             -BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHT---------TEEEESSHHHHHHHBSEEEE-SS
T ss_pred             CCEEEEEc-hHHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHh---------hhhhhhhhhhHhhcccceEeecc
Confidence            68999999 59999999999999999999999998776665432         13334567777888899997765

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PRK08655 prephenate dehydrogenase; Provisional

Probab=97.29  E-value=0.00088  Score=62.83  Aligned_cols=67  Identities=22%  Similarity=0.278  Sum_probs=48.7

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      |+|+|+||+|.+|..+++.|.+.|++|++++|++..........      ++..  ..+..+.+.++|+||-+..
T Consensus         1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~------gv~~--~~~~~e~~~~aDvVIlavp   67 (437)
T PRK08655          1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKEL------GVEY--ANDNIDAAKDADIVIISVP   67 (437)
T ss_pred             CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHc------CCee--ccCHHHHhccCCEEEEecC
Confidence            58999999999999999999999999999999875532221111      1111  2234556778899997764

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=97.27  E-value=0.00064  Score=69.36  Aligned_cols=78  Identities=15%  Similarity=0.122  Sum_probs=58.0

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCC-CE-------------EEEEeCCCCcccccCCCCCccccCcccccCcchHHhh
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADN-HQ-------------VRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC  113 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g-~~-------------V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~  113 (363)
                      ..|++|+|+|+ |++|+.+++.|.+.+ ++             |.+.+++....+.+...........+|+.|.+++.++
T Consensus       567 ~~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~lDv~D~e~L~~~  645 (1042)
T PLN02819        567 KKSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSDSESLLKY  645 (1042)
T ss_pred             ccCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEeecCCHHHHHHh
Confidence            34679999996 999999999998753 33             7788887766554433211111356788899999998


Q ss_pred             ccCCCEEEEccCC
Q 017977          114 IQGSTAVVNLAGT  126 (363)
Q Consensus       114 ~~~~d~Vi~~a~~  126 (363)
                      ++++|+||.+...
T Consensus       646 v~~~DaVIsalP~  658 (1042)
T PLN02819        646 VSQVDVVISLLPA  658 (1042)
T ss_pred             hcCCCEEEECCCc
Confidence            8999999999865

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=97.26  E-value=0.0014  Score=59.83  Aligned_cols=104  Identities=16%  Similarity=0.242  Sum_probs=68.1

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCC-----EEEE--E--eCCCCcccccCCCCCc---cccCcccccCcchHHhhccCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNH-----QVRV--L--TRSRSKAELIFPGKKT---RFFPGVMIAEEPQWRDCIQGS  117 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~-----~V~~--~--~r~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~~~~~~~  117 (363)
                      .-||.|+|++|.+|.+++-.|+..|.     +|..  +  +++.+...........   .....+.+.. +. .+.++++
T Consensus        44 p~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~~-~~-y~~~kda  121 (387)
T TIGR01757        44 TVNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIGI-DP-YEVFEDA  121 (387)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEec-CC-HHHhCCC
Confidence            35999999999999999999998763     2333  3  6655543221111000   0011122222 22 3568899


Q ss_pred             CEEEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhC
Q 017977          118 TAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES  158 (363)
Q Consensus       118 d~Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  158 (363)
                      |+||-+||.+..   ......+.+..|+.-.+.+...+.+.
T Consensus       122 DIVVitAG~prk---pg~tR~dll~~N~~I~k~i~~~I~~~  159 (387)
T TIGR01757       122 DWALLIGAKPRG---PGMERADLLDINGQIFADQGKALNAV  159 (387)
T ss_pred             CEEEECCCCCCC---CCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999998532   23456789999999999999999984

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=97.25  E-value=0.00045  Score=56.67  Aligned_cols=68  Identities=25%  Similarity=0.254  Sum_probs=46.8

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEcc
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA  124 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a  124 (363)
                      ||++.|.| +|.||..|+..|.+.||+|+.-.|+.++........     .. -.....+..++.+.+|+||-..
T Consensus         1 m~~~~i~G-tGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~-----l~-~~i~~~~~~dA~~~aDVVvLAV   68 (211)
T COG2085           1 MMIIAIIG-TGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAA-----LG-PLITGGSNEDAAALADVVVLAV   68 (211)
T ss_pred             CcEEEEec-cChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHh-----hc-cccccCChHHHHhcCCEEEEec
Confidence            45666666 899999999999999999999977766533221110     00 1134445667788899999554

>PRK08040 putative semialdehyde dehydrogenase; Provisional

Probab=97.24  E-value=0.0021  Score=57.70  Aligned_cols=71  Identities=20%  Similarity=0.250  Sum_probs=44.8

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCC---CEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADN---HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      ..++|.|.||||++|+.|++.|.++.   .++..+....+....+...     .....+.+.+.  ..+.++|+||.+++
T Consensus         3 ~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~~saG~~~~~~-----~~~~~v~~~~~--~~~~~~Dvvf~a~p   75 (336)
T PRK08040          3 EGWNIALLGATGAVGEALLELLAERQFPVGELYALASEESAGETLRFG-----GKSVTVQDAAE--FDWSQAQLAFFVAG   75 (336)
T ss_pred             CCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEccCcCCceEEEC-----CcceEEEeCch--hhccCCCEEEECCC
Confidence            45799999999999999999999954   3677665544333332211     11122222222  22468999998875


Q ss_pred             C
Q 017977          126 T  126 (363)
Q Consensus       126 ~  126 (363)
                      .
T Consensus        76 ~   76 (336)
T PRK08040         76 R   76 (336)
T ss_pred             H
Confidence            3

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=97.23  E-value=0.002  Score=57.56  Aligned_cols=76  Identities=14%  Similarity=0.108  Sum_probs=50.7

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCC-----------CCCccccCcccccCcchHHhhccCCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP-----------GKKTRFFPGVMIAEEPQWRDCIQGST  118 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----------~~~~~~~~~~d~~~~~~~~~~~~~~d  118 (363)
                      .++|.|+| +|.+|+.++..|+..|++|++.++++........           ...........+.-..++++++.++|
T Consensus         7 i~~VaVIG-aG~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~l~~av~~aD   85 (321)
T PRK07066          7 IKTFAAIG-SGVIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFVATIEACVADAD   85 (321)
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCCHHHHhcCCC
Confidence            46899999 5999999999999999999999998754332110           00000000011122335778889999


Q ss_pred             EEEEccCC
Q 017977          119 AVVNLAGT  126 (363)
Q Consensus       119 ~Vi~~a~~  126 (363)
                      .||-+...
T Consensus        86 lViEavpE   93 (321)
T PRK07066         86 FIQESAPE   93 (321)
T ss_pred             EEEECCcC
Confidence            99988643

>PLN02353 probable UDP-glucose 6-dehydrogenase

Probab=97.23  E-value=0.0022  Score=60.51  Aligned_cols=78  Identities=14%  Similarity=0.233  Sum_probs=53.3

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhC--CCEEEEEeCCCCcccccCCCCCccccCcc----------cccCcchHHhhccCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQAD--NHQVRVLTRSRSKAELIFPGKKTRFFPGV----------MIAEEPQWRDCIQGS  117 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~----------d~~~~~~~~~~~~~~  117 (363)
                      ||+|.|+| .|++|..++..|.+.  |++|++++.++.+.+.+........-.++          .+.-..++.+.++++
T Consensus         1 ~m~I~ViG-~GyvGl~~A~~lA~~g~g~~V~gvD~~~~~v~~l~~g~~~~~e~gl~ell~~~~~~~l~~t~~~~~~i~~a   79 (473)
T PLN02353          1 MVKICCIG-AGYVGGPTMAVIALKCPDIEVVVVDISVPRIDAWNSDQLPIYEPGLDEVVKQCRGKNLFFSTDVEKHVAEA   79 (473)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhcCCCCeEEEEECCHHHHHHHHcCCCccCCCCHHHHHHHhhcCCEEEEcCHHHHHhcC
Confidence            57999998 699999999999988  48899999988776654332211000010          011223345667889


Q ss_pred             CEEEEccCCCC
Q 017977          118 TAVVNLAGTPI  128 (363)
Q Consensus       118 d~Vi~~a~~~~  128 (363)
                      |++|-|.+.+.
T Consensus        80 dvi~I~V~TP~   90 (473)
T PLN02353         80 DIVFVSVNTPT   90 (473)
T ss_pred             CEEEEEeCCCC
Confidence            99999987654

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=97.22  E-value=0.0027  Score=56.52  Aligned_cols=112  Identities=13%  Similarity=0.187  Sum_probs=72.8

Q ss_pred             EEEEecCcchHHHHHHHHHHhCCC--EEEEEeCCCCccccc----CCCCCccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           52 TVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELI----FPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        52 ~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      ||.|+|+ |.+|..++-.|+..|.  ++..++.+.......    ...........+.+.. .+ .+.++++|+||-+||
T Consensus         1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~-~~-y~~~~~aDivvitaG   77 (307)
T cd05290           1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRA-GD-YDDCADADIIVITAG   77 (307)
T ss_pred             CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEE-CC-HHHhCCCCEEEECCC
Confidence            5899997 9999999999998874  899999876543221    1110000001122321 22 356889999999999


Q ss_pred             CCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEe
Q 017977          126 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLEL  169 (363)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~S  169 (363)
                      .+.....+. ...+.+..|..-.+.+.+.+.+  .+...++.+-
T Consensus        78 ~~~kpg~tr-~R~dll~~N~~I~~~i~~~i~~--~~p~~i~ivv  118 (307)
T cd05290          78 PSIDPGNTD-DRLDLAQTNAKIIREIMGNITK--VTKEAVIILI  118 (307)
T ss_pred             CCCCCCCCc-hHHHHHHHHHHHHHHHHHHHHH--hCCCeEEEEe
Confidence            753321110 1478899999999999999999  4544444433

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd05295 MDH_like Malate dehydrogenase-like

Probab=97.21  E-value=0.0012  Score=61.27  Aligned_cols=115  Identities=14%  Similarity=0.134  Sum_probs=72.1

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhC---C----CEEEEEeCC--CCccccc----CCCCCccccCcccccCcchHHhhccC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQAD---N----HQVRVLTRS--RSKAELI----FPGKKTRFFPGVMIAEEPQWRDCIQG  116 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~---g----~~V~~~~r~--~~~~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~~  116 (363)
                      .-+|+||||+|.||.+|+-.+++-   |    ..++.++..  .......    .... ......+.++.  .-.+.+++
T Consensus       123 p~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a-~pll~~v~i~~--~~~ea~~d  199 (452)
T cd05295         123 PLQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLA-FPLLRGISVTT--DLDVAFKD  199 (452)
T ss_pred             ceEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhH-HhhcCCcEEEE--CCHHHhCC
Confidence            358999999999999999999872   3    245556653  2221110    0000 00011133332  23467899


Q ss_pred             CCEEEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEec
Q 017977          117 STAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELV  170 (363)
Q Consensus       117 ~d~Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS  170 (363)
                      +|+||-+||.+..   ......+.++.|..-.+.+.+++.+....-.+++.+.|
T Consensus       200 aDvvIitag~prk---~G~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~t  250 (452)
T cd05295         200 AHVIVLLDDFLIK---EGEDLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGR  250 (452)
T ss_pred             CCEEEECCCCCCC---cCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeC
Confidence            9999999997533   23346788999999999999999984221144555553

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.18  E-value=0.00072  Score=59.60  Aligned_cols=70  Identities=20%  Similarity=0.147  Sum_probs=52.4

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      ...++|+|+|. |.+|+.+++.|...|.+|++++|++.........       +....+.+++.+.++++|+||++..
T Consensus       149 l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~~~-------g~~~~~~~~l~~~l~~aDiVint~P  218 (287)
T TIGR02853       149 IHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLARITEM-------GLIPFPLNKLEEKVAEIDIVINTIP  218 (287)
T ss_pred             CCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHC-------CCeeecHHHHHHHhccCCEEEECCC
Confidence            34579999996 9999999999999999999999987654332211       1222344567778889999999764

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=97.17  E-value=0.0031  Score=56.12  Aligned_cols=109  Identities=17%  Similarity=0.185  Sum_probs=72.0

Q ss_pred             EEEecCcchHHHHHHHHHHhCC--CEEEEEeCCCCcccccCCCCCcccc--CcccccCcchHHhhccCCCEEEEccCCCC
Q 017977           53 VSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPGKKTRFF--PGVMIAEEPQWRDCIQGSTAVVNLAGTPI  128 (363)
Q Consensus        53 vlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~--~~~d~~~~~~~~~~~~~~d~Vi~~a~~~~  128 (363)
                      |.|+|+ |.+|..++-.|+..|  .++.+++++.+..............  ....+....++ +.++++|+||.++|.+.
T Consensus         1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~~~~-~~l~~aDiVIitag~p~   78 (300)
T cd00300           1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRGGDY-ADAADADIVVITAGAPR   78 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEECCCH-HHhCCCCEEEEcCCCCC
Confidence            468895 899999999999988  6899999987654322211110000  01112112223 47899999999999753


Q ss_pred             CCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEE
Q 017977          129 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLE  168 (363)
Q Consensus       129 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~  168 (363)
                      .   ......+.+..|+.-.+.+.+.+.+  ...+.+|++
T Consensus        79 ~---~~~~R~~l~~~n~~i~~~~~~~i~~--~~p~~~viv  113 (300)
T cd00300          79 K---PGETRLDLINRNAPILRSVITNLKK--YGPDAIILV  113 (300)
T ss_pred             C---CCCCHHHHHHHHHHHHHHHHHHHHH--hCCCeEEEE
Confidence            3   2234578888999999999999998  444434433

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.15  E-value=0.00049  Score=65.30  Aligned_cols=73  Identities=15%  Similarity=0.217  Sum_probs=56.2

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhh-ccCCCEEEEccC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC-IQGSTAVVNLAG  125 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~d~Vi~~a~  125 (363)
                      |+|+|+|+ |.+|+++++.|.+.|++|+++++++........... .....+|..+.+.+.++ ++++|+||-+..
T Consensus         1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~~~-~~~~~gd~~~~~~l~~~~~~~a~~vi~~~~   74 (453)
T PRK09496          1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDRLD-VRTVVGNGSSPDVLREAGAEDADLLIAVTD   74 (453)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhhcC-EEEEEeCCCCHHHHHHcCCCcCCEEEEecC
Confidence            58999997 999999999999999999999998876555433111 11334577787888777 788999987654

>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]

Probab=97.12  E-value=0.0053  Score=52.17  Aligned_cols=75  Identities=17%  Similarity=0.170  Sum_probs=44.0

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCC-CEEE-EEeCCCCccccc--CCCCCccccCcccccCcchHHhhccCCCEEEEcc
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADN-HQVR-VLTRSRSKAELI--FPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA  124 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~-~~~r~~~~~~~~--~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a  124 (363)
                      +||||.|.|++|.+|+.|++.+.+.+ .++. +++|..+.....  -+... ....++-+.  +++.....++|++|.+.
T Consensus         1 ~~iki~V~Ga~GRMG~~ii~~v~~~~~~~L~aa~~~~~~~~~g~d~ge~~g-~~~~gv~v~--~~~~~~~~~~DV~IDFT   77 (266)
T COG0289           1 SMIKVAVAGASGRMGRTLIRAVLEAPDLELVAAFDRPGSLSLGSDAGELAG-LGLLGVPVT--DDLLLVKADADVLIDFT   77 (266)
T ss_pred             CCceEEEEcCCChHHHHHHHHHhcCCCceEEEEEecCCccccccchhhhcc-ccccCceee--cchhhcccCCCEEEECC
Confidence            36899999999999999999999865 5544 445655432110  00000 001112222  22444556788888776


Q ss_pred             CC
Q 017977          125 GT  126 (363)
Q Consensus       125 ~~  126 (363)
                      .+
T Consensus        78 ~P   79 (266)
T COG0289          78 TP   79 (266)
T ss_pred             Cc
Confidence            54

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.12  E-value=0.00069  Score=54.00  Aligned_cols=73  Identities=14%  Similarity=0.111  Sum_probs=50.7

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCC-CEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  127 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~~  127 (363)
                      .++|+|+|+ |.+|+.+++.|.+.| ++|++++|+.+............ ....+   ..+..+.++++|+||.+....
T Consensus        19 ~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~Dvvi~~~~~~   92 (155)
T cd01065          19 GKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGEL-GIAIA---YLDLEELLAEADLIINTTPVG   92 (155)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhc-cccee---ecchhhccccCCEEEeCcCCC
Confidence            468999996 999999999999986 89999999876654432221100 00112   233445578999999998764

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.12  E-value=0.00065  Score=59.82  Aligned_cols=75  Identities=12%  Similarity=0.158  Sum_probs=52.4

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCC-CEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      ...++|+|+|+ |.+|++++..|.+.| .+|++++|+.++.+.+......  ...+.+ +. ...+.+.++|+||++...
T Consensus       121 ~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~--~~~~~~-~~-~~~~~~~~~DivInaTp~  195 (278)
T PRK00258        121 LKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGA--LGKAEL-DL-ELQEELADFDLIINATSA  195 (278)
T ss_pred             CCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhh--ccceee-cc-cchhccccCCEEEECCcC
Confidence            34568999996 999999999999999 7999999998765544322110  001222 11 234566789999999876


Q ss_pred             C
Q 017977          127 P  127 (363)
Q Consensus       127 ~  127 (363)
                      .
T Consensus       196 g  196 (278)
T PRK00258        196 G  196 (278)
T ss_pred             C
Confidence            4

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=97.11  E-value=0.00096  Score=59.18  Aligned_cols=69  Identities=20%  Similarity=0.138  Sum_probs=52.4

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      ..++|+|+|. |.+|+.++..|...|.+|++++|++.........       +.+....+++.+.+.++|+||+++.
T Consensus       151 ~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~~-------G~~~~~~~~l~~~l~~aDiVI~t~p  219 (296)
T PRK08306        151 HGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLARITEM-------GLSPFHLSELAEEVGKIDIIFNTIP  219 (296)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHc-------CCeeecHHHHHHHhCCCCEEEECCC
Confidence            4579999995 9999999999999999999999997553332211       1233344567788889999999763

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.10  E-value=0.0011  Score=62.76  Aligned_cols=74  Identities=19%  Similarity=0.148  Sum_probs=47.3

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCc-ccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK-AELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  127 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~~  127 (363)
                      .++|+|+|+++ +|..+++.|++.|++|++++++... .........   ..++++...+...+...++|+||++++..
T Consensus         5 ~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~~~~d~vv~~~g~~   79 (450)
T PRK14106          5 GKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELG---ELGIELVLGEYPEEFLEGVDLVVVSPGVP   79 (450)
T ss_pred             CCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHH---hcCCEEEeCCcchhHhhcCCEEEECCCCC
Confidence            46899999866 9999999999999999999997532 111000000   00122221111124456799999999863

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.08  E-value=0.0057  Score=55.30  Aligned_cols=104  Identities=13%  Similarity=0.144  Sum_probs=63.8

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCC-EEEEEeCCCCcccccCCCC-----C-----------------ccccCcccc--
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGK-----K-----------------TRFFPGVMI--  104 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~-----~-----------------~~~~~~~d~--  104 (363)
                      ..+|+|.|+ |.+|+++++.|...|. ++.+++++.-+...+....     .                 ......++.  
T Consensus        24 ~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~~~~  102 (339)
T PRK07688         24 EKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVEAIV  102 (339)
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEEEEe
Confidence            358999996 9999999999999997 8999998742211110000     0                 000000101  


Q ss_pred             --cCcchHHhhccCCCEEEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC
Q 017977          105 --AEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM  176 (363)
Q Consensus       105 --~~~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg  176 (363)
                        .+.+.+.++++++|+||.+...                  ...-..+-++|.+  .++ ++|+.++. +.||
T Consensus       103 ~~~~~~~~~~~~~~~DlVid~~Dn------------------~~~r~~ln~~~~~--~~i-P~i~~~~~-g~~G  154 (339)
T PRK07688        103 QDVTAEELEELVTGVDLIIDATDN------------------FETRFIVNDAAQK--YGI-PWIYGACV-GSYG  154 (339)
T ss_pred             ccCCHHHHHHHHcCCCEEEEcCCC------------------HHHHHHHHHHHHH--hCC-CEEEEeee-eeee
Confidence              1334556677888999877542                  2222356677777  554 48887776 6666

>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated

Probab=97.07  E-value=0.0027  Score=60.71  Aligned_cols=75  Identities=15%  Similarity=0.145  Sum_probs=50.7

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCC----------CCccccC-cccccCcchHHhhccCCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG----------KKTRFFP-GVMIAEEPQWRDCIQGST  118 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----------~~~~~~~-~~d~~~~~~~~~~~~~~d  118 (363)
                      .|+|.|+| +|.+|..++..|+..|++|++.+++++..+.+...          ....... ...+.-.+++.++++++|
T Consensus         4 i~kIavIG-~G~MG~~iA~~la~~G~~V~v~D~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~~~~~~~ea~~~aD   82 (495)
T PRK07531          4 IMKAACIG-GGVIGGGWAARFLLAGIDVAVFDPHPEAERIIGEVLANAERAYAMLTDAPLPPEGRLTFCASLAEAVAGAD   82 (495)
T ss_pred             cCEEEEEC-cCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHhhhccchhhhhhceEeeCCHHHHhcCCC
Confidence            46899998 69999999999999999999999988664432100          0000000 001222345677889999


Q ss_pred             EEEEccC
Q 017977          119 AVVNLAG  125 (363)
Q Consensus       119 ~Vi~~a~  125 (363)
                      +||-+..
T Consensus        83 ~Vieavp   89 (495)
T PRK07531         83 WIQESVP   89 (495)
T ss_pred             EEEEcCc
Confidence            9997664

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=97.07  E-value=0.0015  Score=60.00  Aligned_cols=56  Identities=21%  Similarity=0.297  Sum_probs=45.2

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      +.+++|.|+||.|.+|..++..|.+.|++|++++|+..                      +...+.+.++|+||-+..
T Consensus        96 ~~~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~~~----------------------~~~~~~~~~aDlVilavP  151 (374)
T PRK11199         96 PDLRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQDDW----------------------DRAEDILADAGMVIVSVP  151 (374)
T ss_pred             cccceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCCcc----------------------hhHHHHHhcCCEEEEeCc
Confidence            35579999999999999999999999999999998531                      123455678898887764

>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=97.06  E-value=0.0066  Score=54.37  Aligned_cols=54  Identities=22%  Similarity=0.367  Sum_probs=43.6

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      ..|+|.|+| +|.+|+++++.|.+.||+|++.+|+..                      +++.++++++|+||-+..
T Consensus         3 ~~m~I~iiG-~G~~G~~lA~~l~~~G~~V~~~~r~~~----------------------~~~~~~~~~advvi~~vp   56 (308)
T PRK14619          3 QPKTIAILG-AGAWGSTLAGLASANGHRVRVWSRRSG----------------------LSLAAVLADADVIVSAVS   56 (308)
T ss_pred             CCCEEEEEC-ccHHHHHHHHHHHHCCCEEEEEeCCCC----------------------CCHHHHHhcCCEEEEECC
Confidence            347999998 699999999999999999999999753                      234456677888886653

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=97.05  E-value=0.00087  Score=51.05  Aligned_cols=69  Identities=22%  Similarity=0.269  Sum_probs=41.1

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEe-CCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLT-RSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      ...++|-|+|+ |.+|.+|++.|.+.||+|..+. |+....+.....     .....+.   .+.+.++.+|+||-+..
T Consensus         8 ~~~l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~-----~~~~~~~---~~~~~~~~aDlv~iavp   77 (127)
T PF10727_consen    8 AARLKIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAF-----IGAGAIL---DLEEILRDADLVFIAVP   77 (127)
T ss_dssp             ----EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC-------TT--------TTGGGCC-SEEEE-S-
T ss_pred             CCccEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCcccccccccc-----ccccccc---ccccccccCCEEEEEec
Confidence            34579999996 9999999999999999999885 554443333221     1122222   23455778899996654

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=97.03  E-value=0.00097  Score=61.80  Aligned_cols=75  Identities=20%  Similarity=0.217  Sum_probs=57.5

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCC-CEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      ...++|+|+|+ |.+|+.+++.|.+.| .+|+++.|+..+...+...     +........+++.+.+.++|+||++.+.
T Consensus       179 l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~-----~~~~~~~~~~~l~~~l~~aDiVI~aT~a  252 (414)
T PRK13940        179 ISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSA-----FRNASAHYLSELPQLIKKADIIIAAVNV  252 (414)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHH-----hcCCeEecHHHHHHHhccCCEEEECcCC
Confidence            44579999995 999999999999999 4899999998766555432     1112344556777888999999999987


Q ss_pred             CC
Q 017977          127 PI  128 (363)
Q Consensus       127 ~~  128 (363)
                      +.
T Consensus       253 ~~  254 (414)
T PRK13940        253 LE  254 (414)
T ss_pred             CC
Confidence            53

>PRK15057 UDP-glucose 6-dehydrogenase; Provisional

Probab=97.03  E-value=0.0043  Score=57.23  Aligned_cols=75  Identities=16%  Similarity=0.207  Sum_probs=49.8

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCcccc---------CcccccCcchHHhhccCCCEEE
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFF---------PGVMIAEEPQWRDCIQGSTAVV  121 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~---------~~~d~~~~~~~~~~~~~~d~Vi  121 (363)
                      |+|.|+| .|++|..++..|. .||+|+++++++.+.+.+........-         ....+....+..+++.++|+||
T Consensus         1 mkI~VIG-lGyvGl~~A~~lA-~G~~VigvD~d~~kv~~l~~g~~~~~e~~l~~~l~~~~~~l~~t~~~~~~~~~ad~vi   78 (388)
T PRK15057          1 MKITISG-TGYVGLSNGLLIA-QNHEVVALDILPSRVAMLNDRISPIVDKEIQQFLQSDKIHFNATLDKNEAYRDADYVI   78 (388)
T ss_pred             CEEEEEC-CCHHHHHHHHHHH-hCCcEEEEECCHHHHHHHHcCCCCCCCcCHHHHHHhCCCcEEEecchhhhhcCCCEEE
Confidence            5899998 7999999996665 599999999998876655432110000         0112222233455668899999


Q ss_pred             EccCCC
Q 017977          122 NLAGTP  127 (363)
Q Consensus       122 ~~a~~~  127 (363)
                      -+...+
T Consensus        79 i~Vpt~   84 (388)
T PRK15057         79 IATPTD   84 (388)
T ss_pred             EeCCCC
Confidence            887653

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=97.03  E-value=0.0028  Score=50.95  Aligned_cols=59  Identities=20%  Similarity=0.310  Sum_probs=48.5

Q ss_pred             CCCCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           46 QKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        46 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      .....++|+|+|+.+.+|..+++.|.++|.+|+++.|+.                       +++.+.+.++|+||.+.+
T Consensus        40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~-----------------------~~l~~~l~~aDiVIsat~   96 (168)
T cd01080          40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT-----------------------KNLKEHTKQADIVIVAVG   96 (168)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc-----------------------hhHHHHHhhCCEEEEcCC
Confidence            345567999999866789999999999999999988752                       345677889999998888


Q ss_pred             CC
Q 017977          126 TP  127 (363)
Q Consensus       126 ~~  127 (363)
                      .+
T Consensus        97 ~~   98 (168)
T cd01080          97 KP   98 (168)
T ss_pred             CC
Confidence            64

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=97.01  E-value=0.0011  Score=55.15  Aligned_cols=71  Identities=17%  Similarity=0.178  Sum_probs=48.7

Q ss_pred             CCCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           47 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        47 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      ...+|+|+|+|. |.+|+++++.|.+.|++|++.+++..........     + +....+.+++..  .++|+++.+|..
T Consensus        25 ~l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~-----~-g~~~v~~~~l~~--~~~Dv~vp~A~~   95 (200)
T cd01075          25 SLEGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEAVARAAEL-----F-GATVVAPEEIYS--VDADVFAPCALG   95 (200)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH-----c-CCEEEcchhhcc--ccCCEEEecccc
Confidence            345579999996 8999999999999999999999887554433221     1 122223332221  279999988753

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.99  E-value=0.0017  Score=58.75  Aligned_cols=77  Identities=21%  Similarity=0.127  Sum_probs=52.2

Q ss_pred             CCCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc----CCCEEEE
Q 017977           47 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ----GSTAVVN  122 (363)
Q Consensus        47 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~----~~d~Vi~  122 (363)
                      ...++.|||.||+|.+|++.++-+...|..+++.+++.+..+..+..+.   ...+|+.+++..+...+    ++|+|+.
T Consensus       155 ~~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k~lGA---d~vvdy~~~~~~e~~kk~~~~~~DvVlD  231 (347)
T KOG1198|consen  155 LSKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVKKLGA---DEVVDYKDENVVELIKKYTGKGVDVVLD  231 (347)
T ss_pred             cCCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHHHcCC---cEeecCCCHHHHHHHHhhcCCCccEEEE
Confidence            3455799999999999999999999999444444555544444333221   23367766554444433    5899999


Q ss_pred             ccCC
Q 017977          123 LAGT  126 (363)
Q Consensus       123 ~a~~  126 (363)
                      |.+.
T Consensus       232 ~vg~  235 (347)
T KOG1198|consen  232 CVGG  235 (347)
T ss_pred             CCCC
Confidence            9986

>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins

Probab=96.98  E-value=0.0057  Score=54.52  Aligned_cols=100  Identities=20%  Similarity=0.254  Sum_probs=65.7

Q ss_pred             EEEecCcchHHHHHHHHHHhCCC-EEEEEeCCCCccccc----CCCCCccccCcccccCcchHHhhccCCCEEEEccCCC
Q 017977           53 VSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELI----FPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  127 (363)
Q Consensus        53 vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~~  127 (363)
                      |.|+|+ |.+|..++..|+..|. +|++++++++.....    ..... .......+....++ +.++++|+||.+++.+
T Consensus         1 I~IIGa-G~vG~~ia~~la~~~l~eV~L~Di~e~~~~g~~~dl~~~~~-~~~~~~~I~~t~d~-~~l~dADiVIit~g~p   77 (300)
T cd01339           1 ISIIGA-GNVGATLAQLLALKELGDVVLLDIVEGLPQGKALDISQAAP-ILGSDTKVTGTNDY-EDIAGSDVVVITAGIP   77 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhCCCcEEEEEeCCCcHHHHHHHHHHHhhh-hcCCCeEEEEcCCH-HHhCCCCEEEEecCCC
Confidence            579997 9999999999998876 999999987543211    11000 00011222222234 3589999999999875


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHHHHHHHhC
Q 017977          128 IGTRWSSEIKKEIKESRIRVTSKVVDLINES  158 (363)
Q Consensus       128 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  158 (363)
                      ....   ....+.+..|+...+.+++.+.+.
T Consensus        78 ~~~~---~~r~e~~~~n~~i~~~i~~~i~~~  105 (300)
T cd01339          78 RKPG---MSRDDLLGTNAKIVKEVAENIKKY  105 (300)
T ss_pred             CCcC---CCHHHHHHHHHHHHHHHHHHHHHH
Confidence            3322   234456677888888999988883

Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.97  E-value=0.0011  Score=54.13  Aligned_cols=70  Identities=23%  Similarity=0.134  Sum_probs=50.2

Q ss_pred             CCCCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           46 QKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        46 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      .....++|.|+| .|-||+.+++.|..-|.+|++++|.........       .   ......++++++..+|+|+.+..
T Consensus        32 ~~l~g~tvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~-------~---~~~~~~~l~ell~~aDiv~~~~p  100 (178)
T PF02826_consen   32 RELRGKTVGIIG-YGRIGRAVARRLKAFGMRVIGYDRSPKPEEGAD-------E---FGVEYVSLDELLAQADIVSLHLP  100 (178)
T ss_dssp             S-STTSEEEEES-TSHHHHHHHHHHHHTT-EEEEEESSCHHHHHHH-------H---TTEEESSHHHHHHH-SEEEE-SS
T ss_pred             cccCCCEEEEEE-EcCCcCeEeeeeecCCceeEEecccCChhhhcc-------c---ccceeeehhhhcchhhhhhhhhc
Confidence            344567999999 699999999999999999999999887644110       0   11134467788889999987776


Q ss_pred             C
Q 017977          126 T  126 (363)
Q Consensus       126 ~  126 (363)
                      .
T Consensus       101 l  101 (178)
T PF02826_consen  101 L  101 (178)
T ss_dssp             S
T ss_pred             c
Confidence            4

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.97  E-value=0.0041  Score=54.94  Aligned_cols=39  Identities=23%  Similarity=0.269  Sum_probs=34.6

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccc
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL   89 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~   89 (363)
                      +.+|.|+|+ |.+|..++..|+..|++|++++++++..+.
T Consensus         5 ~~~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~~~~   43 (286)
T PRK07819          5 IQRVGVVGA-GQMGAGIAEVCARAGVDVLVFETTEELATA   43 (286)
T ss_pred             ccEEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHHHHHH
Confidence            358999995 999999999999999999999999877544

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=96.97  E-value=0.0094  Score=46.22  Aligned_cols=99  Identities=13%  Similarity=0.196  Sum_probs=59.5

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCC-EEEEEeCCCCcccccCCCCC----ccc--------------cCccccc------
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKK----TRF--------------FPGVMIA------  105 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~----~~~--------------~~~~d~~------  105 (363)
                      ++|+|.| .|.+|+.+++.|...|. ++++++.+.-+...+....-    ...              .+.+++.      
T Consensus         3 ~~v~iiG-~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~~   81 (135)
T PF00899_consen    3 KRVLIIG-AGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEKI   81 (135)
T ss_dssp             -EEEEES-TSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESHC
T ss_pred             CEEEEEC-cCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeeccc
Confidence            5899999 59999999999999996 88998876543322221100    000              0001111      


Q ss_pred             CcchHHhhccCCCEEEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEecc
Q 017977          106 EEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVK  171 (363)
Q Consensus       106 ~~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~  171 (363)
                      +.+.+.+.++++|+||.+...                  ......+-+.|.+  .+. ++|..+..
T Consensus        82 ~~~~~~~~~~~~d~vi~~~d~------------------~~~~~~l~~~~~~--~~~-p~i~~~~~  126 (135)
T PF00899_consen   82 DEENIEELLKDYDIVIDCVDS------------------LAARLLLNEICRE--YGI-PFIDAGVN  126 (135)
T ss_dssp             SHHHHHHHHHTSSEEEEESSS------------------HHHHHHHHHHHHH--TT--EEEEEEEE
T ss_pred             ccccccccccCCCEEEEecCC------------------HHHHHHHHHHHHH--cCC-CEEEEEee
Confidence            334566677789999987653                  1222356677877  454 47766655

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms)

Probab=96.97  E-value=0.0046  Score=56.16  Aligned_cols=34  Identities=32%  Similarity=0.549  Sum_probs=28.7

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCC-CEEEEEeCCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSR   84 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~   84 (363)
                      |+|.|+|++|++|++|++.|.+++ .+|..+..+.
T Consensus         1 ~kVaIvGatG~~G~~L~~~l~~~~~~~l~~v~~~~   35 (341)
T TIGR00978         1 MRVAVLGATGLVGQKFVKLLAKHPYFELAKVVASP   35 (341)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCceEEEEEECh
Confidence            589999999999999999998876 5888885433

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.

>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=96.95  E-value=0.0052  Score=55.69  Aligned_cols=69  Identities=17%  Similarity=0.308  Sum_probs=40.7

Q ss_pred             ccEEEEecCcchHHHHHHHHHHh-CCCE---EEEEeCCCCcccccCCCCCccccCc--ccccCcchHHhhccCCCEEEEc
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQA-DNHQ---VRVLTRSRSKAELIFPGKKTRFFPG--VMIAEEPQWRDCIQGSTAVVNL  123 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~-~g~~---V~~~~r~~~~~~~~~~~~~~~~~~~--~d~~~~~~~~~~~~~~d~Vi~~  123 (363)
                      |++|.|.||||++|+.+++.|++ +++.   ++.++...+.... ..      +.+  ..+.+..+. ..+.++|+||.+
T Consensus         1 m~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss~~sg~~~-~~------f~g~~~~v~~~~~~-~~~~~~Divf~a   72 (369)
T PRK06598          1 MKKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFSTSQAGGAA-PS------FGGKEGTLQDAFDI-DALKKLDIIITC   72 (369)
T ss_pred             CeEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecchhhCCcc-cc------cCCCcceEEecCCh-hHhcCCCEEEEC
Confidence            47999999999999999995655 5565   6665543222111 11      111  111111111 234789999988


Q ss_pred             cCC
Q 017977          124 AGT  126 (363)
Q Consensus       124 a~~  126 (363)
                      ++.
T Consensus        73 ~~~   75 (369)
T PRK06598         73 QGG   75 (369)
T ss_pred             CCH
Confidence            864

>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional

Probab=96.93  E-value=0.006  Score=54.92  Aligned_cols=70  Identities=24%  Similarity=0.370  Sum_probs=42.9

Q ss_pred             ccEEEEecCcchHHHHHHHHHHh-CCCE---EEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQA-DNHQ---VRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~-~g~~---V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      .++|.|.||||++|+.+++.|.+ +.+.   +..+....+......-.     .....+.+.+ . ..+.++|+||.+++
T Consensus         5 ~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~~saGk~~~~~-----~~~l~v~~~~-~-~~~~~~Divf~a~~   77 (347)
T PRK06728          5 GYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSKRSAGKTVQFK-----GREIIIQEAK-I-NSFEGVDIAFFSAG   77 (347)
T ss_pred             CCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECcccCCCCeeeC-----CcceEEEeCC-H-HHhcCCCEEEECCC
Confidence            36999999999999999999995 5666   55555443332222111     0112222222 1 23478999998876


Q ss_pred             C
Q 017977          126 T  126 (363)
Q Consensus       126 ~  126 (363)
                      .
T Consensus        78 ~   78 (347)
T PRK06728         78 G   78 (347)
T ss_pred             h
Confidence            4

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=96.93  E-value=0.008  Score=50.17  Aligned_cols=105  Identities=10%  Similarity=0.101  Sum_probs=63.4

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCC-EEEEEeCCCCcccccCCC-----CC-------------ccccCcccc-----
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPG-----KK-------------TRFFPGVMI-----  104 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~-----~~-------------~~~~~~~d~-----  104 (363)
                      ...+|+|.| .|.+|+++++.|...|. ++++++.+.-+...+...     ..             ......+++     
T Consensus        20 ~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~   98 (202)
T TIGR02356        20 LNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALKE   98 (202)
T ss_pred             cCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEehh
Confidence            335899999 69999999999999996 899998874221111000     00             000001111     


Q ss_pred             -cCcchHHhhccCCCEEEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC
Q 017977          105 -AEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM  176 (363)
Q Consensus       105 -~~~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg  176 (363)
                       .+.+.+.+.++++|+||.+...                  ......+-+.|.+  .++ ++|+.+.. +.+|
T Consensus        99 ~i~~~~~~~~~~~~D~Vi~~~d~------------------~~~r~~l~~~~~~--~~i-p~i~~~~~-g~~G  149 (202)
T TIGR02356        99 RVTAENLELLINNVDLVLDCTDN------------------FATRYLINDACVA--LGT-PLISAAVV-GFGG  149 (202)
T ss_pred             cCCHHHHHHHHhCCCEEEECCCC------------------HHHHHHHHHHHHH--cCC-CEEEEEec-cCeE
Confidence             1334566778899999987643                  1112245677777  554 48877765 5555

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain

Probab=96.92  E-value=0.0062  Score=46.30  Aligned_cols=73  Identities=21%  Similarity=0.238  Sum_probs=42.4

Q ss_pred             EEEEecCcchHHHHHHHHHHh-CCCEEEEE-eCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           52 TVSVTGATGFIGRRLVQRLQA-DNHQVRVL-TRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        52 ~vlVtGatG~iG~~l~~~L~~-~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      ++.|+|++|.+|+.+++.|.+ .++++.++ +|+.+.................+..+.+.+.  ..++|+||-+.+.
T Consensus         1 ki~iiG~~g~~g~~~~~~l~~~~~~~l~av~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~DvV~~~~~~   75 (122)
T smart00859        1 KVAIVGATGYVGQELLRLLAEHPDFEVVALAASARSAGKRVSEAGPHLKGEVVLELEPEDFE--ELAVDIVFLALPH   75 (122)
T ss_pred             CEEEECCCChHHHHHHHHHhcCCCceEEEEEechhhcCcCHHHHCcccccccccccccCChh--hcCCCEEEEcCCc
Confidence            589999999999999999998 47888888 4433222221111000000001112223333  2578999988764

The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=96.92  E-value=0.001  Score=56.31  Aligned_cols=74  Identities=20%  Similarity=0.202  Sum_probs=49.0

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCC-ccccCccc--ccCcchHHhhccCCCEEEEccC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKK-TRFFPGVM--IAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~d--~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      |+|.|+||+|.+|..++..|.+.|++|.+.+|++++...+..... .....+++  +. .....+.++++|+||-+..
T Consensus         1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~~~~~~~~~g~~~~~~-~~~~~ea~~~aDvVilavp   77 (219)
T TIGR01915         1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAKALEELGHGGSDIKVT-GADNAEAAKRADVVILAVP   77 (219)
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHHHHhhccccCCCceEE-EeChHHHHhcCCEEEEECC
Confidence            589999999999999999999999999999998766543321100 00000111  11 1123456778999997664

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=96.91  E-value=0.01  Score=53.70  Aligned_cols=35  Identities=20%  Similarity=0.307  Sum_probs=30.7

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCC-EEEEEeCCC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSR   84 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~   84 (363)
                      ..++|+|+|+ |.+|+++++.|...|. ++++++++.
T Consensus        23 ~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~   58 (338)
T PRK12475         23 REKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDY   58 (338)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence            3468999995 8899999999999997 899999875

>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional

Probab=96.91  E-value=0.0074  Score=53.56  Aligned_cols=57  Identities=14%  Similarity=0.261  Sum_probs=40.0

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCC-EEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      |++|.|.||||++|..|++.|.++.+ ++..+..+...                ++   ......+.++|+||.+..
T Consensus         2 ~~~VaIvGAtGy~G~eLlrlL~~hp~~~l~~~~s~~~~----------------~~---~~~~~~~~~~DvvFlalp   59 (313)
T PRK11863          2 KPKVFIDGEAGTTGLQIRERLAGRSDIELLSIPEAKRK----------------DA---AARRELLNAADVAILCLP   59 (313)
T ss_pred             CcEEEEECCCCHHHHHHHHHHhcCCCeEEEEEecCCCC----------------cc---cCchhhhcCCCEEEECCC
Confidence            56999999999999999999998864 56655544322                11   112234567999997764

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.88  E-value=0.0028  Score=56.17  Aligned_cols=75  Identities=15%  Similarity=0.151  Sum_probs=50.1

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCC--------CccccCc--------ccccCcchHHhh
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK--------KTRFFPG--------VMIAEEPQWRDC  113 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~--------~~~~~~~--------~d~~~~~~~~~~  113 (363)
                      .++|.|+|+ |.+|..++..|++.|++|+++++++...+......        .......        ..+.-.+++.++
T Consensus         3 ~~kIaViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~d~~~a   81 (287)
T PRK08293          3 IKNVTVAGA-GVLGSQIAFQTAFHGFDVTIYDISDEALEKAKERIAKLADRYVRDLEATKEAPAEAALNRITLTTDLAEA   81 (287)
T ss_pred             ccEEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhHHHHHcCeEEeCCHHHH
Confidence            368999995 99999999999999999999999876533321100        0000000        011123457777


Q ss_pred             ccCCCEEEEccC
Q 017977          114 IQGSTAVVNLAG  125 (363)
Q Consensus       114 ~~~~d~Vi~~a~  125 (363)
                      ++++|+||-+..
T Consensus        82 ~~~aDlVieavp   93 (287)
T PRK08293         82 VKDADLVIEAVP   93 (287)
T ss_pred             hcCCCEEEEecc
Confidence            899999998875

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.88  E-value=0.004  Score=59.08  Aligned_cols=77  Identities=18%  Similarity=0.234  Sum_probs=56.1

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHh-hccCCCEEEEccC
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRD-CIQGSTAVVNLAG  125 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~~~~d~Vi~~a~  125 (363)
                      ..+++|+|+|+ |.+|+.+++.|.+.|++|++++++++..+.+...........+|..+.+.+.+ .++++|+||-+..
T Consensus       229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~~~~~~i~gd~~~~~~L~~~~~~~a~~vi~~~~  306 (453)
T PRK09496        229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEELPNTLVLHGDGTDQELLEEEGIDEADAFIALTN  306 (453)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHCCCCeEEECCCCCHHHHHhcCCccCCEEEECCC
Confidence            34679999996 99999999999999999999999987655443321111133457778877754 4568899985543

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)

Probab=96.86  E-value=0.0047  Score=55.00  Aligned_cols=68  Identities=15%  Similarity=0.244  Sum_probs=50.1

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      |+|.|+| .|.+|..+++.|.+.|++|.+.+|++++.+.+.....      ....+.+++.+.++++|+||-+..
T Consensus         1 M~Ig~IG-lG~mG~~la~~L~~~g~~V~~~dr~~~~~~~l~~~g~------~~~~s~~~~~~~~~~~dvIi~~vp   68 (298)
T TIGR00872         1 MQLGLIG-LGRMGANIVRRLAKRGHDCVGYDHDQDAVKAMKEDRT------TGVANLRELSQRLSAPRVVWVMVP   68 (298)
T ss_pred             CEEEEEc-chHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCC------cccCCHHHHHhhcCCCCEEEEEcC
Confidence            5899999 6999999999999999999999999877665543211      112233445555667899987754

This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.

>TIGR00036 dapB dihydrodipicolinate reductase

Probab=96.84  E-value=0.013  Score=51.25  Aligned_cols=33  Identities=30%  Similarity=0.473  Sum_probs=28.3

Q ss_pred             ccEEEEecCcchHHHHHHHHHHh-CCCEEEEEeC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQA-DNHQVRVLTR   82 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~-~g~~V~~~~r   82 (363)
                      ||||.|+|++|.+|+.+++.+.+ .+.++.++..
T Consensus         1 ~ikV~IiGa~G~MG~~i~~~i~~~~~~elvav~d   34 (266)
T TIGR00036         1 TIKVAVAGAAGRMGRELIKAALAAEGLQLVAAFE   34 (266)
T ss_pred             CeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEe
Confidence            36999999999999999999986 5788877654

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.83  E-value=0.0016  Score=58.25  Aligned_cols=73  Identities=21%  Similarity=0.291  Sum_probs=54.5

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCC-CEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      ...++|+|+|+ |-+|+.+++.|.+.| .+|++++|++.+...+....      +.+..+.+++.+.+.++|+||.+.+.
T Consensus       176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~------g~~~~~~~~~~~~l~~aDvVi~at~~  248 (311)
T cd05213         176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKEL------GGNAVPLDELLELLNEADVVISATGA  248 (311)
T ss_pred             ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHc------CCeEEeHHHHHHHHhcCCEEEECCCC
Confidence            34579999996 999999999999876 78999999887654443321      12344445677778889999999876


Q ss_pred             C
Q 017977          127 P  127 (363)
Q Consensus       127 ~  127 (363)
                      +
T Consensus       249 ~  249 (311)
T cd05213         249 P  249 (311)
T ss_pred             C
Confidence            3

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PF13950 Epimerase_Csub: UDP-glucose 4-epimerase C-term subunit; PDB: 1EK5_A 1I3K_B 1I3M_B 1HZJ_A 1EK6_A 1I3N_A 1I3L_A 2CNB_B 1GY8_D 1NAI_A

Probab=96.83  E-value=0.00037  Score=45.67  Aligned_cols=50  Identities=24%  Similarity=0.355  Sum_probs=24.1

Q ss_pred             HHHHhCCCCCCCCcHHHHHHHhccCceeeecCcccChhhHH-HcCCCcccccHHHHHHHHh
Q 017977          303 LGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAK-ELGFPFKYRYVKDALKAIM  362 (363)
Q Consensus       303 i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~lG~~p~~~~~~~~l~~~~  362 (363)
                      ++++.|++..+.+-+    ...|+...++.     |++|++ .|||+|+++ +++++++++
T Consensus         2 ~e~vtG~~i~~~~~~----rR~GD~~~~~A-----d~~kA~~~LgW~p~~~-L~~~i~~~w   52 (62)
T PF13950_consen    2 FEKVTGKKIPVEYAP----RRPGDPAHLVA-----DISKAREELGWKPKYS-LEDMIRDAW   52 (62)
T ss_dssp             HHHHHTS---EEEE-------TT--SEE-B-------HHHHHHC----SSS-HHHHHHHHH
T ss_pred             cHHHHCCCCCceECC----CCCCchhhhhC-----CHHHHHHHhCCCcCCC-HHHHHHHHH
Confidence            567777763322211    12444444443     489996 599999996 999999875

...

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=96.82  E-value=0.0017  Score=51.92  Aligned_cols=73  Identities=21%  Similarity=0.419  Sum_probs=47.9

Q ss_pred             EEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCc-cccCcc----cccCcchHHhhccCCCEEEEccC
Q 017977           52 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKT-RFFPGV----MIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        52 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~----d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      ||.|+|| |-.|.+++..|.++|++|+...|++...+.+...... ....+.    .+.-..+++++++++|+||-+..
T Consensus         1 KI~ViGa-G~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~dl~~a~~~ad~IiiavP   78 (157)
T PF01210_consen    1 KIAVIGA-GNWGTALAALLADNGHEVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATTDLEEALEDADIIIIAVP   78 (157)
T ss_dssp             EEEEESS-SHHHHHHHHHHHHCTEEEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEESSHHHHHTT-SEEEE-S-
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccccCHHHHhCcccEEEeccc
Confidence            6899995 9999999999999999999999987554333221110 001111    11123567888999999996543

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.81  E-value=0.0026  Score=57.09  Aligned_cols=75  Identities=16%  Similarity=0.126  Sum_probs=49.3

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCC----CccccCc------ccccCcchHHhhccCCCE
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK----KTRFFPG------VMIAEEPQWRDCIQGSTA  119 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~----~~~~~~~------~d~~~~~~~~~~~~~~d~  119 (363)
                      .++|.|+|+ |.+|..++..|++.|++|++++++.+..+......    .......      ..+.-.++..+.++++|+
T Consensus         4 ~~~I~vIGa-G~mG~~iA~~l~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~aDl   82 (311)
T PRK06130          4 IQNLAIIGA-GTMGSGIAALFARKGLQVVLIDVMEGALERARGVIERALGVYAPLGIASAGMGRIRMEAGLAAAVSGADL   82 (311)
T ss_pred             ccEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHhhhcccHHHHhhceEEeCCHHHHhccCCE
Confidence            468999995 99999999999999999999999876644332100    0000000      001112345566788999


Q ss_pred             EEEccC
Q 017977          120 VVNLAG  125 (363)
Q Consensus       120 Vi~~a~  125 (363)
                      ||-+..
T Consensus        83 Vi~av~   88 (311)
T PRK06130         83 VIEAVP   88 (311)
T ss_pred             EEEecc
Confidence            997764

>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed

Probab=96.81  E-value=0.0033  Score=57.94  Aligned_cols=68  Identities=15%  Similarity=0.154  Sum_probs=52.3

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEE
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVN  122 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~  122 (363)
                      |++|+|+|+ |.+|+.++..+.+.|++|++++.++..........    ....++.|.+.+.++++.+|+|..
T Consensus         2 ~~~igilG~-Gql~~ml~~aa~~lG~~v~~~d~~~~~pa~~~ad~----~~~~~~~D~~~l~~~a~~~dvit~   69 (372)
T PRK06019          2 MKTIGIIGG-GQLGRMLALAAAPLGYKVIVLDPDPDSPAAQVADE----VIVADYDDVAALRELAEQCDVITY   69 (372)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchhHhCce----EEecCCCCHHHHHHHHhcCCEEEe
Confidence            568999996 89999999999999999999998764422211111    333577888899999999998753

>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated

Probab=96.79  E-value=0.0022  Score=57.95  Aligned_cols=75  Identities=19%  Similarity=0.346  Sum_probs=49.8

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCcccc-Ccc----cccCcchHHhhccCCCEEEEcc
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFF-PGV----MIAEEPQWRDCIQGSTAVVNLA  124 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~----d~~~~~~~~~~~~~~d~Vi~~a  124 (363)
                      ||+|.|+| .|.+|..++..|.+.|++|.+++|++...+.+......... ...    ...-..+..+.++++|+||-+.
T Consensus         1 mmkI~iiG-~G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~v   79 (325)
T PRK00094          1 MMKIAVLG-AGSWGTALAIVLARNGHDVTLWARDPEQAAEINADRENPRYLPGIKLPDNLRATTDLAEALADADLILVAV   79 (325)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccCCCCcCCCCeEEeCCHHHHHhCCCEEEEeC
Confidence            57999999 59999999999999999999999987554433221100000 000    1112234556678899999776


Q ss_pred             C
Q 017977          125 G  125 (363)
Q Consensus       125 ~  125 (363)
                      .
T Consensus        80 ~   80 (325)
T PRK00094         80 P   80 (325)
T ss_pred             C
Confidence            4

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.77  E-value=0.0043  Score=58.76  Aligned_cols=74  Identities=15%  Similarity=0.054  Sum_probs=46.3

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc-CCCEEEEccCCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-GSTAVVNLAGTP  127 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~d~Vi~~a~~~  127 (363)
                      +++|+|||+.| +|...++.|++.|++|.+.+++............   ..++++.....-...+. ++|.||..+|.+
T Consensus         5 ~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~---~~g~~~~~~~~~~~~~~~~~d~vV~s~gi~   79 (447)
T PRK02472          5 NKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELL---EEGIKVICGSHPLELLDEDFDLMVKNPGIP   79 (447)
T ss_pred             CCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHH---hcCCEEEeCCCCHHHhcCcCCEEEECCCCC
Confidence            46899999977 9999999999999999999976533221100000   01122221111112234 489999999874

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.74  E-value=0.002  Score=57.07  Aligned_cols=74  Identities=12%  Similarity=0.175  Sum_probs=50.5

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCcc--------ccCc-------ccccCcchHHhhcc
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTR--------FFPG-------VMIAEEPQWRDCIQ  115 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~--------~~~~-------~d~~~~~~~~~~~~  115 (363)
                      ++|.|+|+ |.+|..++..|++.|++|++++++++..+.........        ....       ..+.-.+++.+.++
T Consensus         2 ~~V~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~   80 (288)
T PRK09260          2 EKLVVVGA-GVMGRGIAYVFAVSGFQTTLVDIKQEQLESAQQEIASIFEQGVARGKLTEAARQAALARLSYSLDLKAAVA   80 (288)
T ss_pred             cEEEEECc-cHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCcHHHhhc
Confidence            57999996 99999999999999999999999887654432100000        0000       00112345667788


Q ss_pred             CCCEEEEccC
Q 017977          116 GSTAVVNLAG  125 (363)
Q Consensus       116 ~~d~Vi~~a~  125 (363)
                      ++|+||-+..
T Consensus        81 ~aD~Vi~avp   90 (288)
T PRK09260         81 DADLVIEAVP   90 (288)
T ss_pred             CCCEEEEecc
Confidence            9999998875

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.73  E-value=0.0023  Score=59.71  Aligned_cols=73  Identities=15%  Similarity=0.214  Sum_probs=54.1

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCC-CEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      ...++|+|+|+ |.+|+.+++.|...| .+|++++|+..+...+.....      ....+.+++.+.+.++|+||.+.+.
T Consensus       178 l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g------~~~i~~~~l~~~l~~aDvVi~aT~s  250 (417)
T TIGR01035       178 LKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELG------GEAVKFEDLEEYLAEADIVISSTGA  250 (417)
T ss_pred             ccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcC------CeEeeHHHHHHHHhhCCEEEECCCC
Confidence            34569999996 999999999999999 799999998866543322211      1223345677778899999998775


Q ss_pred             C
Q 017977          127 P  127 (363)
Q Consensus       127 ~  127 (363)
                      +
T Consensus       251 ~  251 (417)
T TIGR01035       251 P  251 (417)
T ss_pred             C
Confidence            3

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=96.72  E-value=0.0014  Score=53.62  Aligned_cols=99  Identities=15%  Similarity=0.206  Sum_probs=56.7

Q ss_pred             EEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCc--------cccC------cc-cccCcchHHhhccC
Q 017977           52 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKT--------RFFP------GV-MIAEEPQWRDCIQG  116 (363)
Q Consensus        52 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~--------~~~~------~~-d~~~~~~~~~~~~~  116 (363)
                      +|.|+|+ |.+|+.++..++..|++|+.++++++..+........        ....      .. .+.-..++.++. +
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~i~~~~dl~~~~-~   78 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIERLLDRLVRKGRLSQEEADAALARISFTTDLEEAV-D   78 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHHHHHHHHHHTTTTTHHHHHHHHHTEEEESSGGGGC-T
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHHHHHhhhhhhccchhhhhhhhhhhcccccCHHHHh-h
Confidence            6899996 9999999999999999999999988653321110000        0000      00 111123455555 8


Q ss_pred             CCEEEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEecc
Q 017977          117 STAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVK  171 (363)
Q Consensus       117 ~d~Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~  171 (363)
                      +|.||-+..-                 ++..-+.++..+.+.  -...-|+.|.+
T Consensus        79 adlViEai~E-----------------~l~~K~~~~~~l~~~--~~~~~ilasnT  114 (180)
T PF02737_consen   79 ADLVIEAIPE-----------------DLELKQELFAELDEI--CPPDTILASNT  114 (180)
T ss_dssp             ESEEEE-S-S-----------------SHHHHHHHHHHHHCC--S-TTSEEEE--
T ss_pred             hheehhhccc-----------------cHHHHHHHHHHHHHH--hCCCceEEecC
Confidence            9999988743                 233445677777762  22345666665

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=96.72  E-value=0.0017  Score=57.22  Aligned_cols=76  Identities=17%  Similarity=0.225  Sum_probs=52.6

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCC-EEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      ..++|+|+|+ |..|++++..|.+.|. +|++++|+..+.+.+....... +....+...+++.+.+.++|+||++...
T Consensus       126 ~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~-~~~~~~~~~~~~~~~~~~aDiVInaTp~  202 (284)
T PRK12549        126 SLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNAR-FPAARATAGSDLAAALAAADGLVHATPT  202 (284)
T ss_pred             cCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhh-CCCeEEEeccchHhhhCCCCEEEECCcC
Confidence            3468999995 8899999999999996 8999999987765543221000 1112233334455567889999999643

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=96.71  E-value=0.018  Score=49.36  Aligned_cols=36  Identities=22%  Similarity=0.217  Sum_probs=30.0

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCC-EEEEEeCCCCc
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSK   86 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~   86 (363)
                      ..+|+|.| .|.+|+++++.|...|. ++++++.+.-+
T Consensus        24 ~~~VlvvG-~GglGs~va~~La~~Gvg~i~lvD~D~ve   60 (240)
T TIGR02355        24 ASRVLIVG-LGGLGCAASQYLAAAGVGNLTLLDFDTVS   60 (240)
T ss_pred             CCcEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCCccc
Confidence            35899999 59999999999999994 78888876533

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=96.71  E-value=0.0028  Score=57.32  Aligned_cols=75  Identities=21%  Similarity=0.310  Sum_probs=50.0

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCc-cccCcc----cccCcchHHhhccCCCEEEEcc
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKT-RFFPGV----MIAEEPQWRDCIQGSTAVVNLA  124 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~----d~~~~~~~~~~~~~~d~Vi~~a  124 (363)
                      +|+|.|+| +|-+|..++..|++.||+|++++|+++..+.+...... ....+.    .+.-.++..+.++++|+||-+.
T Consensus         4 ~m~I~iIG-~G~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~~~aD~Vi~~v   82 (328)
T PRK14618          4 GMRVAVLG-AGAWGTALAVLAASKGVPVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEALAGADFAVVAV   82 (328)
T ss_pred             CCeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHHcCCCEEEEEC
Confidence            57999998 59999999999999999999999987654433221000 000011    1222335566678899998776


Q ss_pred             C
Q 017977          125 G  125 (363)
Q Consensus       125 ~  125 (363)
                      .
T Consensus        83 ~   83 (328)
T PRK14618         83 P   83 (328)
T ss_pred             c
Confidence            4

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.67  E-value=0.0027  Score=59.45  Aligned_cols=73  Identities=22%  Similarity=0.291  Sum_probs=54.3

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCC-EEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      ...++|+|+|+ |-+|+.+++.|...|. +|++++|++.....+....      +.+..+.+++.+.+.++|+||.+.+.
T Consensus       180 ~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~------g~~~~~~~~~~~~l~~aDvVI~aT~s  252 (423)
T PRK00045        180 LSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEF------GGEAIPLDELPEALAEADIVISSTGA  252 (423)
T ss_pred             ccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc------CCcEeeHHHHHHHhccCCEEEECCCC
Confidence            34579999995 9999999999999996 8999999876654433221      12334445667778899999999875


Q ss_pred             C
Q 017977          127 P  127 (363)
Q Consensus       127 ~  127 (363)
                      +
T Consensus       253 ~  253 (423)
T PRK00045        253 P  253 (423)
T ss_pred             C
Confidence            3

>PRK11559 garR tartronate semialdehyde reductase; Provisional

Probab=96.67  E-value=0.0026  Score=56.64  Aligned_cols=66  Identities=14%  Similarity=0.293  Sum_probs=49.6

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      +|+|.|+| .|.+|..+++.|.+.|++|.+.+|++.+.+.....       +.  .-.+++.++++++|+||-+..
T Consensus         2 ~~~IgviG-~G~mG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~-------g~--~~~~~~~e~~~~~d~vi~~vp   67 (296)
T PRK11559          2 TMKVGFIG-LGIMGKPMSKNLLKAGYSLVVYDRNPEAVAEVIAA-------GA--ETASTAKAVAEQCDVIITMLP   67 (296)
T ss_pred             CceEEEEc-cCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHC-------CC--eecCCHHHHHhcCCEEEEeCC
Confidence            46899999 69999999999999999999999988665443221       11  122345666788999997764

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=96.66  E-value=0.0015  Score=47.26  Aligned_cols=66  Identities=24%  Similarity=0.350  Sum_probs=47.4

Q ss_pred             EEEEecCcchHHHHHHHHHHhCC---CEEEEE-eCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           52 TVSVTGATGFIGRRLVQRLQADN---HQVRVL-TRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        52 ~vlVtGatG~iG~~l~~~L~~~g---~~V~~~-~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      ||.|+| +|.+|.+|++.|++.|   ++|..+ .|++++...+....      ...+.. .+..++++.+|+||-+.-
T Consensus         1 kI~iIG-~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~------~~~~~~-~~~~~~~~~advvilav~   70 (96)
T PF03807_consen    1 KIGIIG-AGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEY------GVQATA-DDNEEAAQEADVVILAVK   70 (96)
T ss_dssp             EEEEES-TSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHC------TTEEES-EEHHHHHHHTSEEEE-S-
T ss_pred             CEEEEC-CCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhh------cccccc-CChHHhhccCCEEEEEEC
Confidence            578886 7999999999999999   999965 88887766553321      122222 246667788999997764

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]

Probab=96.66  E-value=0.012  Score=52.01  Aligned_cols=74  Identities=23%  Similarity=0.453  Sum_probs=53.9

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCc-cccCcc----cccCcchHHhhccCCCEEEEcc
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKT-RFFPGV----MIAEEPQWRDCIQGSTAVVNLA  124 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~----d~~~~~~~~~~~~~~d~Vi~~a  124 (363)
                      +|+|.|+|+ |--|.+|+..|.+.||+|+.-.|++.....+...... ....++    ++.-..++.++++++|+|+-..
T Consensus         1 ~~kI~ViGa-GswGTALA~~la~ng~~V~lw~r~~~~~~~i~~~~~N~~yLp~i~lp~~l~at~Dl~~a~~~ad~iv~av   79 (329)
T COG0240           1 MMKIAVIGA-GSWGTALAKVLARNGHEVRLWGRDEEIVAEINETRENPKYLPGILLPPNLKATTDLAEALDGADIIVIAV   79 (329)
T ss_pred             CceEEEEcC-ChHHHHHHHHHHhcCCeeEEEecCHHHHHHHHhcCcCccccCCccCCcccccccCHHHHHhcCCEEEEEC
Confidence            479999995 9999999999999999999999988665554433211 112221    2333567888899999998654

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=96.63  E-value=0.0025  Score=55.89  Aligned_cols=74  Identities=18%  Similarity=0.170  Sum_probs=49.0

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCCC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  127 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~~  127 (363)
                      ..++++|+|+ |.+|++++..|.+.|++|++++|+..+.+.+......  .......+.++  ..+.++|+||++.+..
T Consensus       116 ~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~--~~~~~~~~~~~--~~~~~~DivInatp~g  189 (270)
T TIGR00507       116 PNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQR--YGEIQAFSMDE--LPLHRVDLIINATSAG  189 (270)
T ss_pred             cCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhh--cCceEEechhh--hcccCccEEEECCCCC
Confidence            3468999997 8999999999999999999999987665443222100  00011111111  1235789999999763

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=96.62  E-value=0.0051  Score=54.42  Aligned_cols=75  Identities=12%  Similarity=0.174  Sum_probs=44.4

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCC-CEEEEEeCCCCcccccCCCCC-ccccCcccc--cCcchHHhhccCCCEEEEcc
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKK-TRFFPGVMI--AEEPQWRDCIQGSTAVVNLA  124 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~-~~~~~~~d~--~~~~~~~~~~~~~d~Vi~~a  124 (363)
                      +|+||.|.||+|+.|..|++.|..+. .++..++.+......+..... ........+  .|.+.+  ..++||+||-+.
T Consensus         1 ~~~kV~IvGasGYtG~EL~rlL~~Hp~ve~~~~ss~~~~g~~~~~~~p~l~g~~~l~~~~~~~~~~--~~~~~DvvFlal   78 (349)
T COG0002           1 MMIKVGIVGASGYTGLELLRLLAGHPDVELILISSRERAGKPVSDVHPNLRGLVDLPFQTIDPEKI--ELDECDVVFLAL   78 (349)
T ss_pred             CCceEEEEcCCCCcHHHHHHHHhcCCCeEEEEeechhhcCCchHHhCcccccccccccccCChhhh--hcccCCEEEEec
Confidence            36799999999999999999999875 476666554433222221111 000111111  122322  356799999776


Q ss_pred             C
Q 017977          125 G  125 (363)
Q Consensus       125 ~  125 (363)
                      .
T Consensus        79 P   79 (349)
T COG0002          79 P   79 (349)
T ss_pred             C
Confidence            4

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=96.62  E-value=0.004  Score=55.76  Aligned_cols=71  Identities=14%  Similarity=0.098  Sum_probs=49.4

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCC--EEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      ++.++|.|+| .|.+|..++..|.+.|+  +|++++|++...+......    .  .+. -..+..+.++++|+||.+..
T Consensus         4 ~~~~~I~IIG-~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g----~--~~~-~~~~~~~~~~~aDvViiavp   75 (307)
T PRK07502          4 PLFDRVALIG-IGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELG----L--GDR-VTTSAAEAVKGADLVILCVP   75 (307)
T ss_pred             cCCcEEEEEe-eCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCC----C--Cce-ecCCHHHHhcCCCEEEECCC
Confidence            3446899999 79999999999999884  8999999876544332211    0  011 11234556788999998875


Q ss_pred             C
Q 017977          126 T  126 (363)
Q Consensus       126 ~  126 (363)
                      .
T Consensus        76 ~   76 (307)
T PRK07502         76 V   76 (307)
T ss_pred             H
Confidence            3

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=96.61  E-value=0.02  Score=48.79  Aligned_cols=104  Identities=14%  Similarity=0.085  Sum_probs=61.7

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCC-EEEEEeCCCCcccccCC-----CCCc---------------cccCccccc---
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFP-----GKKT---------------RFFPGVMIA---  105 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~-----~~~~---------------~~~~~~d~~---  105 (363)
                      ..+|+|.| .|.+|+++++.|...|. ++++++.+.-+...+..     ....               .....++..   
T Consensus        21 ~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~~~   99 (228)
T cd00757          21 NARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAYNER   99 (228)
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEecce
Confidence            35899999 69999999999999995 77777765422111110     0000               000111111   


Q ss_pred             -CcchHHhhccCCCEEEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC
Q 017977          106 -EEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM  176 (363)
Q Consensus       106 -~~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg  176 (363)
                       +.+.+.+.++++|+||.+....                  ..-..+-++|.+  .++ ++|+.+.. +.+|
T Consensus       100 i~~~~~~~~~~~~DvVi~~~d~~------------------~~r~~l~~~~~~--~~i-p~i~~g~~-g~~g  149 (228)
T cd00757         100 LDAENAEELIAGYDLVLDCTDNF------------------ATRYLINDACVK--LGK-PLVSGAVL-GFEG  149 (228)
T ss_pred             eCHHHHHHHHhCCCEEEEcCCCH------------------HHHHHHHHHHHH--cCC-CEEEEEec-cCEE
Confidence             2345566788899999886531                  112246677777  554 58877655 5455

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PLN02545 3-hydroxybutyryl-CoA dehydrogenase

Probab=96.61  E-value=0.0088  Score=53.22  Aligned_cols=39  Identities=26%  Similarity=0.308  Sum_probs=34.2

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCccc
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE   88 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~   88 (363)
                      .+++|.|+|+ |.+|..++..|+..|++|++++++++..+
T Consensus         3 ~~~~V~vIG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~   41 (295)
T PLN02545          3 EIKKVGVVGA-GQMGSGIAQLAAAAGMDVWLLDSDPAALS   41 (295)
T ss_pred             CcCEEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCHHHHH
Confidence            3468999995 99999999999999999999999886643

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=96.60  E-value=0.0073  Score=52.22  Aligned_cols=100  Identities=16%  Similarity=0.152  Sum_probs=70.4

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccC-cccccCcchHHhhc-----cCCCEEEE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFP-GVMIAEEPQWRDCI-----QGSTAVVN  122 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~d~~~~~~~~~~~-----~~~d~Vi~  122 (363)
                      .+.+|+|+||+|-+|+-..+...-.|++|+++.-++++...+.+...   +. .+|.... ++.+.+     +++|+.|.
T Consensus       150 ~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lG---fD~~idyk~~-d~~~~L~~a~P~GIDvyfe  225 (340)
T COG2130         150 AGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELG---FDAGIDYKAE-DFAQALKEACPKGIDVYFE  225 (340)
T ss_pred             CCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcC---CceeeecCcc-cHHHHHHHHCCCCeEEEEE
Confidence            34689999999999999888888889999999999999887766433   22 3455444 344333     47899999


Q ss_pred             ccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC
Q 017977          123 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM  176 (363)
Q Consensus       123 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg  176 (363)
                      |.|.                       .+++++.....--.|++.+.-. +-|+
T Consensus       226 NVGg-----------------------~v~DAv~~~ln~~aRi~~CG~I-S~YN  255 (340)
T COG2130         226 NVGG-----------------------EVLDAVLPLLNLFARIPVCGAI-SQYN  255 (340)
T ss_pred             cCCc-----------------------hHHHHHHHhhccccceeeeeeh-hhcC
Confidence            9986                       3444444431223457777776 5565

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=96.59  E-value=0.0032  Score=56.76  Aligned_cols=74  Identities=28%  Similarity=0.234  Sum_probs=50.6

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcc---hHHhhcc--CCCEEEEcc
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEP---QWRDCIQ--GSTAVVNLA  124 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~~~--~~d~Vi~~a  124 (363)
                      ..+|||+||+|.+|...++.+...|..+++++.++.+.+.......   ...+++.+.+   .+.+...  ++|+|+...
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~~lGA---d~vi~y~~~~~~~~v~~~t~g~gvDvv~D~v  219 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLELLKELGA---DHVINYREEDFVEQVRELTGGKGVDVVLDTV  219 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHhcCC---CEEEcCCcccHHHHHHHHcCCCCceEEEECC
Confidence            5699999999999999999999999777777766665554433322   1223444433   2223332  589999998


Q ss_pred             CC
Q 017977          125 GT  126 (363)
Q Consensus       125 ~~  126 (363)
                      |.
T Consensus       220 G~  221 (326)
T COG0604         220 GG  221 (326)
T ss_pred             CH
Confidence            75

>COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism]

Probab=96.59  E-value=0.0057  Score=54.46  Aligned_cols=68  Identities=15%  Similarity=0.152  Sum_probs=53.1

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEE
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVN  122 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~  122 (363)
                      |++|.|+|| |.+|+-++.+....|++|++++-+++.........    ....++.|.+.++++.+.+|+|-.
T Consensus         1 ~~tvgIlGG-GQLgrMm~~aa~~lG~~v~vLdp~~~~PA~~va~~----~i~~~~dD~~al~ela~~~DViT~   68 (375)
T COG0026           1 MKTVGILGG-GQLGRMMALAAARLGIKVIVLDPDADAPAAQVADR----VIVAAYDDPEALRELAAKCDVITY   68 (375)
T ss_pred             CCeEEEEcC-cHHHHHHHHHHHhcCCEEEEecCCCCCchhhcccc----eeecCCCCHHHHHHHHhhCCEEEE
Confidence            468999996 99999999999999999999997665533322211    344567789999999999998853

>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated

Probab=96.59  E-value=0.006  Score=56.77  Aligned_cols=74  Identities=15%  Similarity=0.160  Sum_probs=52.9

Q ss_pred             CCCCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc--CCCEEEEc
Q 017977           46 QKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNL  123 (363)
Q Consensus        46 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~Vi~~  123 (363)
                      ..+.+|+|+|+|+ |.+|+.++..+.+.|++|++++.++..........    ...+|..|.+.+.++++  ++|+|+..
T Consensus         8 ~~~~~~~ilIiG~-g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~~ad~----~~~~~~~d~~~l~~~~~~~~id~vi~~   82 (395)
T PRK09288          8 LSPSATRVMLLGS-GELGKEVAIEAQRLGVEVIAVDRYANAPAMQVAHR----SHVIDMLDGDALRAVIEREKPDYIVPE   82 (395)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchHHhhhh----eEECCCCCHHHHHHHHHHhCCCEEEEe
Confidence            3345679999995 89999999999999999999998775422211110    22356667777877777  78998854


Q ss_pred             c
Q 017977          124 A  124 (363)
Q Consensus       124 a  124 (363)
                      .
T Consensus        83 ~   83 (395)
T PRK09288         83 I   83 (395)
T ss_pred             e
Confidence            3

>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=96.57  E-value=0.022  Score=50.44  Aligned_cols=26  Identities=35%  Similarity=0.618  Sum_probs=23.5

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNH   75 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~   75 (363)
                      +++|.|.||||-+|+.+++.|.++.+
T Consensus         1 ~~~VavvGATG~VG~~~~~~L~e~~f   26 (334)
T COG0136           1 KLNVAVLGATGAVGQVLLELLEERHF   26 (334)
T ss_pred             CcEEEEEeccchHHHHHHHHHHhcCC
Confidence            46899999999999999999999754

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.57  E-value=0.0095  Score=52.28  Aligned_cols=57  Identities=14%  Similarity=0.274  Sum_probs=45.8

Q ss_pred             CCCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           47 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        47 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      ...+++|+|+|++|.+|+.++..|+++|.+|+++.|..                       ..+.+.++++|+||++.|.
T Consensus       156 ~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t-----------------------~~L~~~~~~aDIvI~AtG~  212 (283)
T PRK14192        156 ELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRT-----------------------QNLPELVKQADIIVGAVGK  212 (283)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCc-----------------------hhHHHHhccCCEEEEccCC
Confidence            45567999999999999999999999999998887621                       1244455788999999875

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=96.56  E-value=0.0097  Score=54.45  Aligned_cols=36  Identities=19%  Similarity=0.287  Sum_probs=30.4

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCC-EEEEEeCCC
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSR   84 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~   84 (363)
                      ....+|+|+| .|.+|.++++.|...|. ++++++.+.
T Consensus        39 l~~~~VliiG-~GglG~~v~~~La~~Gvg~i~ivD~D~   75 (370)
T PRK05600         39 LHNARVLVIG-AGGLGCPAMQSLASAGVGTITLIDDDT   75 (370)
T ss_pred             hcCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCCE
Confidence            3345899999 59999999999999995 888888764

>PLN00203 glutamyl-tRNA reductase

Probab=96.56  E-value=0.0037  Score=59.59  Aligned_cols=76  Identities=18%  Similarity=0.243  Sum_probs=55.7

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCC-EEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      ...++|+|+|+ |-+|+.+++.|...|. +|+++.|+..+...+.....   ...+.+...+++.+.+.++|+||.+.+.
T Consensus       264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~---g~~i~~~~~~dl~~al~~aDVVIsAT~s  339 (519)
T PLN00203        264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFP---DVEIIYKPLDEMLACAAEADVVFTSTSS  339 (519)
T ss_pred             CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhC---CCceEeecHhhHHHHHhcCCEEEEccCC
Confidence            34579999997 9999999999999996 79999999877655543211   0112333445667788899999988765


Q ss_pred             C
Q 017977          127 P  127 (363)
Q Consensus       127 ~  127 (363)
                      +
T Consensus       340 ~  340 (519)
T PLN00203        340 E  340 (519)
T ss_pred             C
Confidence            3

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=96.54  E-value=0.0034  Score=55.32  Aligned_cols=66  Identities=23%  Similarity=0.257  Sum_probs=46.9

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      |+|.|+| .|.+|..++..|.+.|++|.+++|++...+.......      .+.... .. +.+.++|+||-+..
T Consensus         1 m~I~IIG-~G~mG~sla~~L~~~g~~V~~~d~~~~~~~~a~~~g~------~~~~~~-~~-~~~~~aDlVilavp   66 (279)
T PRK07417          1 MKIGIVG-LGLIGGSLGLDLRSLGHTVYGVSRRESTCERAIERGL------VDEAST-DL-SLLKDCDLVILALP   66 (279)
T ss_pred             CeEEEEe-ecHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCC------cccccC-CH-hHhcCCCEEEEcCC
Confidence            5899999 7999999999999999999999998765544332210      111111 12 34678999997764

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.54  E-value=0.025  Score=51.64  Aligned_cols=34  Identities=21%  Similarity=0.353  Sum_probs=29.5

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCC-EEEEEeCCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSR   84 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~   84 (363)
                      ..+|+|.|+ |.+|+++++.|...|. ++++++.+.
T Consensus        28 ~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~   62 (355)
T PRK05597         28 DAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDT   62 (355)
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            358999995 9999999999999995 788888765

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.51  E-value=0.01  Score=51.84  Aligned_cols=58  Identities=17%  Similarity=0.330  Sum_probs=48.4

Q ss_pred             CCCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           47 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        47 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      ...+++|+|+|.++.+|+.++..|.++|..|+++.+..                       ..+.+.++++|+||.+.|.
T Consensus       155 ~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t-----------------------~~l~~~~~~ADIVIsAvg~  211 (286)
T PRK14175        155 DLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS-----------------------KDMASYLKDADVIVSAVGK  211 (286)
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc-----------------------hhHHHHHhhCCEEEECCCC
Confidence            45567999999999999999999999999999987632                       2466778889999988886


Q ss_pred             C
Q 017977          127 P  127 (363)
Q Consensus       127 ~  127 (363)
                      +
T Consensus       212 p  212 (286)
T PRK14175        212 P  212 (286)
T ss_pred             C
Confidence            4

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=96.51  E-value=0.0086  Score=54.04  Aligned_cols=75  Identities=16%  Similarity=0.070  Sum_probs=50.5

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhc-----cCCCEEEEc
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI-----QGSTAVVNL  123 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-----~~~d~Vi~~  123 (363)
                      ...+|+|+||+|.+|..+++.+...|.+|++++++.++.+.....+.   ..-+|..+.+.+.+.+     .++|+|+.+
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~~lGa---~~vi~~~~~~~~~~~~~~~~~~gvdvv~d~  214 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLKKLGF---DVAFNYKTVKSLEETLKKASPDGYDCYFDN  214 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCC---CEEEeccccccHHHHHHHhCCCCeEEEEEC
Confidence            34689999999999999999999999999999988766554433221   1112222222232222     258999998


Q ss_pred             cCC
Q 017977          124 AGT  126 (363)
Q Consensus       124 a~~  126 (363)
                      .|.
T Consensus       215 ~G~  217 (325)
T TIGR02825       215 VGG  217 (325)
T ss_pred             CCH
Confidence            874

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=96.49  E-value=0.027  Score=46.81  Aligned_cols=33  Identities=21%  Similarity=0.316  Sum_probs=29.9

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCC-EEEEEeCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRS   83 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~   83 (363)
                      ..+|+|.|+ |.+|+.++..|...|. ++++++++
T Consensus        21 ~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        21 QATVAICGL-GGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             CCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            358999995 9999999999999997 79999987

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.49  E-value=0.012  Score=52.26  Aligned_cols=39  Identities=23%  Similarity=0.231  Sum_probs=34.1

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccc
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL   89 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~   89 (363)
                      .++|.|+|+ |.+|..++..|+..|++|++++|+++..+.
T Consensus         4 ~~kI~vIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~   42 (292)
T PRK07530          4 IKKVGVIGA-GQMGNGIAHVCALAGYDVLLNDVSADRLEA   42 (292)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHH
Confidence            368999995 999999999999999999999998765443

>PRK08328 hypothetical protein; Provisional

Probab=96.49  E-value=0.031  Score=47.67  Aligned_cols=34  Identities=21%  Similarity=0.346  Sum_probs=29.1

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCC-EEEEEeCCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSR   84 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~   84 (363)
                      ..+|+|.| .|.+|+++++.|...|. ++++++.+.
T Consensus        27 ~~~VlIiG-~GGlGs~ia~~La~~Gvg~i~lvD~D~   61 (231)
T PRK08328         27 KAKVAVVG-VGGLGSPVAYYLAAAGVGRILLIDEQT   61 (231)
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence            35899999 59999999999999994 788887654

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=96.47  E-value=0.044  Score=42.91  Aligned_cols=32  Identities=16%  Similarity=0.305  Sum_probs=28.2

Q ss_pred             EEEEecCcchHHHHHHHHHHhCCC-EEEEEeCCC
Q 017977           52 TVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSR   84 (363)
Q Consensus        52 ~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~   84 (363)
                      +|+|.|+ |.+|.++++.|...|. ++.+++.+.
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~   33 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDT   33 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCC
Confidence            5899995 9999999999999996 788888764

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=96.47  E-value=0.025  Score=48.72  Aligned_cols=35  Identities=23%  Similarity=0.215  Sum_probs=29.8

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCC-EEEEEeCCC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSR   84 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~   84 (363)
                      ...+|+|.|+ |.+|+++++.|...|. ++++++.+.
T Consensus        31 ~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~   66 (245)
T PRK05690         31 KAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDT   66 (245)
T ss_pred             cCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCE
Confidence            3468999996 9999999999999995 788887654

>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional

Probab=96.47  E-value=0.0048  Score=54.90  Aligned_cols=65  Identities=14%  Similarity=0.269  Sum_probs=49.7

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      ++|.|+| .|.+|..++..|++.|++|.+.+|++.+.+.+....       .  ....+..++++++|+||-+..
T Consensus         2 ~~Ig~IG-lG~mG~~mA~~l~~~G~~V~v~d~~~~~~~~~~~~g-------~--~~~~s~~~~~~~aDvVi~~vp   66 (296)
T PRK15461          2 AAIAFIG-LGQMGSPMASNLLKQGHQLQVFDVNPQAVDALVDKG-------A--TPAASPAQAAAGAEFVITMLP   66 (296)
T ss_pred             CeEEEEe-eCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHcC-------C--cccCCHHHHHhcCCEEEEecC
Confidence            5899999 799999999999999999999999987765543221       1  122345566788999997764

>PRK15182 Vi polysaccharide biosynthesis protein TviB; Provisional

Probab=96.45  E-value=0.017  Score=54.04  Aligned_cols=75  Identities=15%  Similarity=0.191  Sum_probs=50.0

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCc-------ccccCcchHHhhccCCCEEEEc
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPG-------VMIAEEPQWRDCIQGSTAVVNL  123 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-------~d~~~~~~~~~~~~~~d~Vi~~  123 (363)
                      |+|.|+| .|++|..++..|.+ ||+|+++++++.+.+.+........-..       ..+. ...-.+.++++|++|-|
T Consensus         7 mkI~vIG-lGyvGlpmA~~la~-~~~V~g~D~~~~~ve~l~~G~~~~~e~~~~~l~~~g~l~-~t~~~~~~~~advvii~   83 (425)
T PRK15182          7 VKIAIIG-LGYVGLPLAVEFGK-SRQVVGFDVNKKRILELKNGVDVNLETTEEELREARYLK-FTSEIEKIKECNFYIIT   83 (425)
T ss_pred             CeEEEEC-cCcchHHHHHHHhc-CCEEEEEeCCHHHHHHHHCcCCCCCCCCHHHHHhhCCee-EEeCHHHHcCCCEEEEE
Confidence            7999998 79999999999777 6999999999988776652211000000       0011 11112347789999988


Q ss_pred             cCCCC
Q 017977          124 AGTPI  128 (363)
Q Consensus       124 a~~~~  128 (363)
                      .+.+.
T Consensus        84 Vptp~   88 (425)
T PRK15182         84 VPTPI   88 (425)
T ss_pred             cCCCC
Confidence            87653

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=96.44  E-value=0.016  Score=51.88  Aligned_cols=67  Identities=21%  Similarity=0.337  Sum_probs=51.5

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      ...++|.|.| .|.||+.+++.|..-|++|++++|.......         ..  .+...+++.++++++|+|+.+...
T Consensus       134 l~g~tvgIvG-~G~IG~~vA~~l~afG~~V~~~~~~~~~~~~---------~~--~~~~~~~l~e~l~~aDvvv~~lPl  200 (312)
T PRK15469        134 REDFTIGILG-AGVLGSKVAQSLQTWGFPLRCWSRSRKSWPG---------VQ--SFAGREELSAFLSQTRVLINLLPN  200 (312)
T ss_pred             cCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCCCCCC---------ce--eecccccHHHHHhcCCEEEECCCC
Confidence            3457999999 7999999999999999999999986543211         01  112345788999999999988764

>PRK08223 hypothetical protein; Validated

Probab=96.42  E-value=0.048  Score=47.71  Aligned_cols=34  Identities=15%  Similarity=0.143  Sum_probs=29.0

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCC-EEEEEeCCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSR   84 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~   84 (363)
                      ..+|+|.| .|.+|.++++.|...|. ++.+++.+.
T Consensus        27 ~s~VlIvG-~GGLGs~va~~LA~aGVG~i~lvD~D~   61 (287)
T PRK08223         27 NSRVAIAG-LGGVGGIHLLTLARLGIGKFTIADFDV   61 (287)
T ss_pred             cCCEEEEC-CCHHHHHHHHHHHHhCCCeEEEEeCCC
Confidence            35899999 59999999999999994 788888764

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=96.40  E-value=0.046  Score=45.42  Aligned_cols=33  Identities=15%  Similarity=0.285  Sum_probs=28.2

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCC-EEEEEeCCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSR   84 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~   84 (363)
                      .+|+|.|+. .+|.++++.|...|. ++++++.+.
T Consensus        20 s~VlviG~g-glGsevak~L~~~GVg~i~lvD~d~   53 (198)
T cd01485          20 AKVLIIGAG-ALGAEIAKNLVLAGIDSITIVDHRL   53 (198)
T ss_pred             CcEEEECCC-HHHHHHHHHHHHcCCCEEEEEECCc
Confidence            589999965 599999999999994 788888764

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form

Probab=96.39  E-value=0.027  Score=49.73  Aligned_cols=55  Identities=13%  Similarity=0.216  Sum_probs=38.9

Q ss_pred             EEEEecCcchHHHHHHHHHHhCC-CEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           52 TVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        52 ~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      ||.|.||+||.|..|++.|..+. .++..+.-+..                .+   ..+..++++++|+||.+..
T Consensus         3 ~v~IvGasGy~G~el~rlL~~HP~~el~~l~s~~~----------------~~---~~~~~~~~~~~D~vFlalp   58 (310)
T TIGR01851         3 KVFIDGEAGTTGLQIRERLSGRDDIELLSIAPDRR----------------KD---AAERAKLLNAADVAILCLP   58 (310)
T ss_pred             eEEEECCCChhHHHHHHHHhCCCCeEEEEEecccc----------------cC---cCCHhHhhcCCCEEEECCC
Confidence            79999999999999999999975 35655543321                11   1123355678999997764

This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment.

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=96.39  E-value=0.0072  Score=54.91  Aligned_cols=75  Identities=21%  Similarity=0.156  Sum_probs=50.4

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCC-CCCccccCcccccCcchHHhhc-----cCCCEEEE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP-GKKTRFFPGVMIAEEPQWRDCI-----QGSTAVVN  122 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~-----~~~d~Vi~  122 (363)
                      .+.+|+|+||+|.+|..+++.+...|.+|++++++..+.+.+.. .+.   ...++..+.+.+.+.+     .++|+||+
T Consensus       151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa---~~vi~~~~~~~~~~~i~~~~~~gvd~v~d  227 (338)
T cd08295         151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGF---DDAFNYKEEPDLDAALKRYFPNGIDIYFD  227 (338)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC---ceeEEcCCcccHHHHHHHhCCCCcEEEEE
Confidence            34689999999999999999999999999999988766554433 111   1112322222232221     36899999


Q ss_pred             ccCC
Q 017977          123 LAGT  126 (363)
Q Consensus       123 ~a~~  126 (363)
                      +.|.
T Consensus       228 ~~g~  231 (338)
T cd08295         228 NVGG  231 (338)
T ss_pred             CCCH
Confidence            8763

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PRK11880 pyrroline-5-carboxylate reductase; Reviewed

Probab=96.39  E-value=0.0043  Score=54.32  Aligned_cols=66  Identities=20%  Similarity=0.209  Sum_probs=47.5

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCC---CEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEcc
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADN---HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA  124 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a  124 (363)
                      ||+|.|+| +|.+|..++..|.+.|   ++|.+++|++...+.+....      ++.+.  ++..+.++++|+||-+.
T Consensus         2 mm~I~iIG-~G~mG~~la~~l~~~g~~~~~v~v~~r~~~~~~~~~~~~------g~~~~--~~~~~~~~~advVil~v   70 (267)
T PRK11880          2 MKKIGFIG-GGNMASAIIGGLLASGVPAKDIIVSDPSPEKRAALAEEY------GVRAA--TDNQEAAQEADVVVLAV   70 (267)
T ss_pred             CCEEEEEe-chHHHHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhc------CCeec--CChHHHHhcCCEEEEEc
Confidence            67999999 5999999999999988   78999999876654432211      12222  23445567899999665

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=96.39  E-value=0.0039  Score=46.87  Aligned_cols=70  Identities=23%  Similarity=0.240  Sum_probs=52.4

Q ss_pred             EEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhh-ccCCCEEEEccC
Q 017977           53 VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC-IQGSTAVVNLAG  125 (363)
Q Consensus        53 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~d~Vi~~a~  125 (363)
                      |+|.|. |-+|+.+++.|.+.+.+|+++++++..........  .....+|..+.+.+.++ +++++.|+-+..
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~~--~~~i~gd~~~~~~l~~a~i~~a~~vv~~~~   71 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELREEG--VEVIYGDATDPEVLERAGIEKADAVVILTD   71 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTT--SEEEES-TTSHHHHHHTTGGCESEEEEESS
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhcc--cccccccchhhhHHhhcCccccCEEEEccC
Confidence            678885 89999999999997779999999987755544332  11445788888888764 578899986664

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.38  E-value=0.012  Score=51.91  Aligned_cols=37  Identities=22%  Similarity=0.283  Sum_probs=33.4

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcc
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA   87 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~   87 (363)
                      +++|.|+|+ |.+|..++..|++.|++|++++++++..
T Consensus         3 ~~kI~VIG~-G~mG~~ia~~la~~g~~V~~~d~~~~~~   39 (282)
T PRK05808          3 IQKIGVIGA-GTMGNGIAQVCAVAGYDVVMVDISDAAV   39 (282)
T ss_pred             ccEEEEEcc-CHHHHHHHHHHHHCCCceEEEeCCHHHH
Confidence            458999995 9999999999999999999999987665

>TIGR00518 alaDH alanine dehydrogenase

Probab=96.37  E-value=0.0061  Score=55.92  Aligned_cols=74  Identities=9%  Similarity=0.086  Sum_probs=53.9

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      ..+|+|+|+ |-+|+..++.|...|.+|++++|++.+.+.+......  ....+..+.+.+.+.+.++|+||++++.
T Consensus       167 ~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~--~v~~~~~~~~~l~~~l~~aDvVI~a~~~  240 (370)
T TIGR00518       167 PGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGG--RIHTRYSNAYEIEDAVKRADLLIGAVLI  240 (370)
T ss_pred             CceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCc--eeEeccCCHHHHHHHHccCCEEEEcccc
Confidence            457999986 9999999999999999999999987654433221110  1112334556788888999999998854

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial

Probab=96.35  E-value=0.029  Score=50.82  Aligned_cols=70  Identities=17%  Similarity=0.233  Sum_probs=41.7

Q ss_pred             cEEEEecCcchHHHHHHHHHH-hCCCE---EEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQ-ADNHQ---VRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~-~~g~~---V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      |+|.|.||||-+|+.+++.|. ++++.   ++.++-..+......-.     .....+.+.+.. +.+.++|++|.+++.
T Consensus         1 ~~VavvGATG~VG~~ll~~L~~e~~fp~~~~~~~ss~~s~g~~~~f~-----~~~~~v~~~~~~-~~~~~vDivffa~g~   74 (366)
T TIGR01745         1 KNVGLVGWRGMVGSVLMQRMQEERDFDAIRPVFFSTSQLGQAAPSFG-----GTTGTLQDAFDI-DALKALDIIITCQGG   74 (366)
T ss_pred             CeEEEEcCcCHHHHHHHHHHHhCCCCccccEEEEEchhhCCCcCCCC-----CCcceEEcCccc-ccccCCCEEEEcCCH
Confidence            479999999999999999999 66654   44444332222211111     011122222211 246789999999874

>PRK13304 L-aspartate dehydrogenase; Reviewed

Probab=96.34  E-value=0.016  Score=50.53  Aligned_cols=68  Identities=16%  Similarity=0.210  Sum_probs=45.0

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhC--CCEEE-EEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQAD--NHQVR-VLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~-~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      ||+|.|+| +|.+|+.+++.|.+.  ++++. +++|++++.......        .+..-.+++++++.++|+|+.++..
T Consensus         1 mmrIgIIG-~G~iG~~ia~~l~~~~~~~elv~v~d~~~~~a~~~a~~--------~~~~~~~~~~ell~~~DvVvi~a~~   71 (265)
T PRK13304          1 MLKIGIVG-CGAIASLITKAILSGRINAELYAFYDRNLEKAENLASK--------TGAKACLSIDELVEDVDLVVECASV   71 (265)
T ss_pred             CCEEEEEC-ccHHHHHHHHHHHcCCCCeEEEEEECCCHHHHHHHHHh--------cCCeeECCHHHHhcCCCEEEEcCCh
Confidence            47999999 699999999999876  46654 455655444332221        1111223466666889999999753

>PLN02712 arogenate dehydrogenase

Probab=96.32  E-value=0.012  Score=58.24  Aligned_cols=39  Identities=26%  Similarity=0.440  Sum_probs=33.7

Q ss_pred             CCCCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCC
Q 017977           46 QKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS   85 (363)
Q Consensus        46 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   85 (363)
                      ....+|+|.|+| .|.+|+.+++.|.+.|++|++++|+..
T Consensus        48 ~~~~~~kIgIIG-~G~mG~slA~~L~~~G~~V~~~dr~~~   86 (667)
T PLN02712         48 DNTTQLKIAIIG-FGNYGQFLAKTLISQGHTVLAHSRSDH   86 (667)
T ss_pred             ccCCCCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence            334457999999 699999999999999999999999743

>PRK08057 cobalt-precorrin-6x reductase; Reviewed

Probab=96.31  E-value=0.04  Score=47.33  Aligned_cols=93  Identities=11%  Similarity=0.069  Sum_probs=63.2

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc--CCCEEEEccCCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGTP  127 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~Vi~~a~~~  127 (363)
                      |++|+|+|||+ =|+.|++.|.+.|+.|++..-........ ....   ....-+.+.+.+.+.++  ++++||....+.
T Consensus         2 ~~~IlvlgGT~-egr~la~~L~~~g~~v~~Svat~~g~~~~-~~~~---v~~G~l~~~~~l~~~l~~~~i~~VIDATHPf   76 (248)
T PRK08057          2 MPRILLLGGTS-EARALARALAAAGVDIVLSLAGRTGGPAD-LPGP---VRVGGFGGAEGLAAYLREEGIDLVIDATHPY   76 (248)
T ss_pred             CceEEEEechH-HHHHHHHHHHhCCCeEEEEEccCCCCccc-CCce---EEECCCCCHHHHHHHHHHCCCCEEEECCCcc
Confidence            56899999865 79999999999999888776655333111 1100   12233447788888886  789999887641


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCe
Q 017977          128 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPS  165 (363)
Q Consensus       128 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  165 (363)
                           .           ..-.+++.++|.+  .++.-+
T Consensus        77 -----A-----------~~is~~a~~ac~~--~~ipyi   96 (248)
T PRK08057         77 -----A-----------AQISANAAAACRA--LGIPYL   96 (248)
T ss_pred             -----H-----------HHHHHHHHHHHHH--hCCcEE
Confidence                 1           2235689999999  677633

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.30  E-value=0.015  Score=51.17  Aligned_cols=58  Identities=17%  Similarity=0.284  Sum_probs=47.9

Q ss_pred             CCCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           47 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        47 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      ...+++|.|+|.+|.+|+.++..|+++|+.|+++.|...                       ++.+..+++|+||-+.+.
T Consensus       156 ~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~-----------------------~l~e~~~~ADIVIsavg~  212 (301)
T PRK14194        156 DLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRST-----------------------DAKALCRQADIVVAAVGR  212 (301)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCC-----------------------CHHHHHhcCCEEEEecCC
Confidence            445689999999999999999999999999999876432                       356667788999988876


Q ss_pred             C
Q 017977          127 P  127 (363)
Q Consensus       127 ~  127 (363)
                      +
T Consensus       213 ~  213 (301)
T PRK14194        213 P  213 (301)
T ss_pred             h
Confidence            3

>PRK06444 prephenate dehydrogenase; Provisional

Probab=96.30  E-value=0.0088  Score=49.42  Aligned_cols=28  Identities=29%  Similarity=0.387  Sum_probs=26.6

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEE
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVR   78 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~   78 (363)
                      |+|.|+||+|.+|+.++..|.+.|+.|+
T Consensus         1 ~~~~iiG~~G~mG~~~~~~~~~~g~~v~   28 (197)
T PRK06444          1 MMEIIIGKNGRLGRVLCSILDDNGLGVY   28 (197)
T ss_pred             CEEEEEecCCcHHHHHHHHHHhCCCEEE
Confidence            5899999999999999999999999986

>COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only]

Probab=96.30  E-value=0.022  Score=47.18  Aligned_cols=67  Identities=22%  Similarity=0.280  Sum_probs=44.8

Q ss_pred             cEEEEecCcchHHHHHHHHHHhC--CC-EEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQAD--NH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~--g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      |+|.|+| +|.||..|++.+...  +. .|.+.+|+.++...+...     +...   ...++.+++.+.|.|+-+|+.
T Consensus         1 l~vgiVG-cGaIG~~l~e~v~~~~~~~e~v~v~D~~~ek~~~~~~~-----~~~~---~~s~ide~~~~~DlvVEaAS~   70 (255)
T COG1712           1 LKVGIVG-CGAIGKFLLELVRDGRVDFELVAVYDRDEEKAKELEAS-----VGRR---CVSDIDELIAEVDLVVEAASP   70 (255)
T ss_pred             CeEEEEe-ccHHHHHHHHHHhcCCcceeEEEEecCCHHHHHHHHhh-----cCCC---ccccHHHHhhccceeeeeCCH
Confidence            5799999 799999999888754  34 456667777666554433     1111   224566666778888888764

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=96.30  E-value=0.0061  Score=53.72  Aligned_cols=75  Identities=15%  Similarity=0.093  Sum_probs=51.7

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCC-EEEEEeCCCCcccccCCCCCccccCcc-cccCcchHHhhccCCCEEEEccCC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGV-MIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      ..++|+|+|+ |..|++++..|.+.|. +|+++.|+.++.+.+......  ...+ .+...+++...+.++|+|||+...
T Consensus       124 ~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~--~~~~~~~~~~~~~~~~~~~~DiVInaTp~  200 (282)
T TIGR01809       124 AGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQ--VGVITRLEGDSGGLAIEKAAEVLVSTVPA  200 (282)
T ss_pred             CCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhh--cCcceeccchhhhhhcccCCCEEEECCCC
Confidence            4568999995 9999999999999996 799999998776655332110  0001 111113344556789999999875

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>TIGR01771 L-LDH-NAD L-lactate dehydrogenase

Probab=96.28  E-value=0.02  Score=50.82  Aligned_cols=98  Identities=18%  Similarity=0.197  Sum_probs=65.6

Q ss_pred             EecCcchHHHHHHHHHHhCCC--EEEEEeCCCCcccccCCCCCc---cccCcccccCcchHHhhccCCCEEEEccCCCCC
Q 017977           55 VTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGKKT---RFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIG  129 (363)
Q Consensus        55 VtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~~~~  129 (363)
                      |+| +|.+|..++-.|+..+.  ++..++++.............   .......+.. .. .+.++++|+||-+||.+..
T Consensus         1 iIG-aG~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~~-~~-~~~~~daDivVitag~~rk   77 (299)
T TIGR01771         1 IIG-AGNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIRS-GD-YSDCKDADLVVITAGAPQK   77 (299)
T ss_pred             CCC-cCHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEec-CC-HHHHCCCCEEEECCCCCCC
Confidence            467 49999999999998774  799999876543221110000   0001123332 22 3568899999999997533


Q ss_pred             CCCChhhHHHHHHHHHHHHHHHHHHHHhC
Q 017977          130 TRWSSEIKKEIKESRIRVTSKVVDLINES  158 (363)
Q Consensus       130 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  158 (363)
                         ......+.+..|..-.+.+.+.+.+.
T Consensus        78 ---~g~~R~dll~~N~~i~~~~~~~i~~~  103 (299)
T TIGR01771        78 ---PGETRLELVGRNVRIMKSIVPEVVKS  103 (299)
T ss_pred             ---CCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence               22346788999999999999999983

This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.

>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=96.26  E-value=0.014  Score=51.75  Aligned_cols=37  Identities=19%  Similarity=0.363  Sum_probs=33.2

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCccc
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE   88 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~   88 (363)
                      ++|.|+|+ |.+|..++..|+..|++|+++++++...+
T Consensus         4 ~~I~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~l~   40 (291)
T PRK06035          4 KVIGVVGS-GVMGQGIAQVFARTGYDVTIVDVSEEILK   40 (291)
T ss_pred             cEEEEECc-cHHHHHHHHHHHhcCCeEEEEeCCHHHHH
Confidence            58999995 99999999999999999999999886643

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.26  E-value=0.0099  Score=49.55  Aligned_cols=70  Identities=13%  Similarity=0.104  Sum_probs=45.7

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcc-cccCCCCCccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-ELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      ..++|+|+|| |-+|...++.|++.|++|+++++...+. ..+....      .+.+.....-...++++|.||-+.+
T Consensus         9 ~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~~~------~i~~~~~~~~~~~l~~adlViaaT~   79 (202)
T PRK06718          9 SNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPELTENLVKLVEEG------KIRWKQKEFEPSDIVDAFLVIAATN   79 (202)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHHhCC------CEEEEecCCChhhcCCceEEEEcCC
Confidence            4479999996 9999999999999999999998754332 1211111      1222222222344678898886554

>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase

Probab=96.25  E-value=0.0052  Score=54.60  Aligned_cols=64  Identities=16%  Similarity=0.236  Sum_probs=48.4

Q ss_pred             EEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           52 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        52 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      +|.|+| .|.+|..++..|++.|++|++.+|++.+.+.+....         ....++..++++++|+||-+..
T Consensus         1 ~IgvIG-~G~mG~~iA~~l~~~G~~V~~~dr~~~~~~~~~~~g---------~~~~~~~~~~~~~aDivi~~vp   64 (291)
T TIGR01505         1 KVGFIG-LGIMGSPMSINLAKAGYQLHVTTIGPEVADELLAAG---------AVTAETARQVTEQADVIFTMVP   64 (291)
T ss_pred             CEEEEE-ecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCC---------CcccCCHHHHHhcCCEEEEecC
Confidence            478898 699999999999999999999999986655443221         1122345677888999998764

This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.

>PRK07574 formate dehydrogenase; Provisional

Probab=96.25  E-value=0.013  Score=53.74  Aligned_cols=70  Identities=19%  Similarity=0.221  Sum_probs=51.8

Q ss_pred             CCCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           47 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        47 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      ....|+|.|+| .|-||+.+++.|..-|.+|++++|...+......         .++.-..+++++++.+|+|+.+...
T Consensus       189 ~L~gktVGIvG-~G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~~---------~g~~~~~~l~ell~~aDvV~l~lPl  258 (385)
T PRK07574        189 DLEGMTVGIVG-AGRIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQE---------LGLTYHVSFDSLVSVCDVVTIHCPL  258 (385)
T ss_pred             ecCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEECCCCCchhhHhh---------cCceecCCHHHHhhcCCEEEEcCCC
Confidence            34568999999 6999999999999999999999987633221110         1222234688889999999977754

>PRK13302 putative L-aspartate dehydrogenase; Provisional

Probab=96.25  E-value=0.03  Score=49.06  Aligned_cols=70  Identities=17%  Similarity=0.242  Sum_probs=45.6

Q ss_pred             CccEEEEecCcchHHHHHHHHHHh--CCCEEEEE-eCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQA--DNHQVRVL-TRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~--~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      .+++|.|+| +|.+|+.+++.|.+  .++++.++ +|++.+.......     +...  .-.+++++++.++|+|+-++.
T Consensus         5 ~~irIGIIG-~G~IG~~~a~~L~~~~~~~el~aV~dr~~~~a~~~a~~-----~g~~--~~~~~~eell~~~D~Vvi~tp   76 (271)
T PRK13302          5 PELRVAIAG-LGAIGKAIAQALDRGLPGLTLSAVAVRDPQRHADFIWG-----LRRP--PPVVPLDQLATHADIVVEAAP   76 (271)
T ss_pred             CeeEEEEEC-ccHHHHHHHHHHHhcCCCeEEEEEECCCHHHHHHHHHh-----cCCC--cccCCHHHHhcCCCEEEECCC
Confidence            347999999 69999999999987  37888755 5555443332211     0000  112345566778999998876


Q ss_pred             C
Q 017977          126 T  126 (363)
Q Consensus       126 ~  126 (363)
                      .
T Consensus        77 ~   77 (271)
T PRK13302         77 A   77 (271)
T ss_pred             c
Confidence            4

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=96.23  E-value=0.0067  Score=54.74  Aligned_cols=71  Identities=27%  Similarity=0.334  Sum_probs=48.7

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhh---ccCCCEEEEccCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC---IQGSTAVVNLAGT  126 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~---~~~~d~Vi~~a~~  126 (363)
                      ..+|+|+||+|.+|..+++.+...|.+|+++++++...+.+.....      .++.+.+.+.+.   +.++|.|+++++.
T Consensus       163 ~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~d~v~~~~g~  236 (332)
T cd08259         163 GDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILKELGA------DYVIDGSKFSEDVKKLGGADVVIELVGS  236 (332)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHcCC------cEEEecHHHHHHHHhccCCCEEEECCCh
Confidence            4589999999999999999999999999999987755443321110      112222112222   2378999999874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=96.19  E-value=0.045  Score=47.36  Aligned_cols=100  Identities=18%  Similarity=0.096  Sum_probs=69.6

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccC-cccccCcchHHhhcc-----CCCEEEEc
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFP-GVMIAEEPQWRDCIQ-----GSTAVVNL  123 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~d~~~~~~~~~~~~-----~~d~Vi~~  123 (363)
                      +.+|+|.||+|-+|+-+-+-..-.|+.|++.+-+.++...+.....   +. .+++-++..+.++++     ++|+-|.+
T Consensus       154 geTv~VSaAsGAvGql~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~G---~d~afNYK~e~~~~~aL~r~~P~GIDiYfeN  230 (343)
T KOG1196|consen  154 GETVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSKEKVDLLKTKFG---FDDAFNYKEESDLSAALKRCFPEGIDIYFEN  230 (343)
T ss_pred             CCEEEEeeccchhHHHHHHHHHhcCCEEEEecCChhhhhhhHhccC---CccceeccCccCHHHHHHHhCCCcceEEEec
Confidence            3689999999999999888888899999999999888776655432   22 345555545555553     78999999


Q ss_pred             cCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC
Q 017977          124 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM  176 (363)
Q Consensus       124 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg  176 (363)
                      .|..            +       ...++..+..    -.|++.+.-. +.|.
T Consensus       231 VGG~------------~-------lDavl~nM~~----~gri~~CG~I-SqYN  259 (343)
T KOG1196|consen  231 VGGK------------M-------LDAVLLNMNL----HGRIAVCGMI-SQYN  259 (343)
T ss_pred             cCcH------------H-------HHHHHHhhhh----ccceEeeeee-hhcc
Confidence            8851            0       1134444444    3468888766 6665

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=96.18  E-value=0.047  Score=44.36  Aligned_cols=32  Identities=16%  Similarity=0.325  Sum_probs=28.5

Q ss_pred             EEEEecCcchHHHHHHHHHHhCCC-EEEEEeCCC
Q 017977           52 TVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSR   84 (363)
Q Consensus        52 ~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~   84 (363)
                      +|+|.| .|.+|..+++.|...|. +++.++.+.
T Consensus         1 ~VlViG-~GglGs~ia~~La~~Gvg~i~lvD~D~   33 (174)
T cd01487           1 KVGIAG-AGGLGSNIAVLLARSGVGNLKLVDFDV   33 (174)
T ss_pred             CEEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            589999 59999999999999996 699998875

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=96.16  E-value=0.0076  Score=55.22  Aligned_cols=73  Identities=18%  Similarity=0.297  Sum_probs=61.3

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCC-CEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      ...++|||+|| |=+|.-++++|.++| .+|+++.|...+...+....      ++++...+++...+..+|+||-+.+.
T Consensus       176 L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~------~~~~~~l~el~~~l~~~DvVissTsa  248 (414)
T COG0373         176 LKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKL------GAEAVALEELLEALAEADVVISSTSA  248 (414)
T ss_pred             cccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHh------CCeeecHHHHHHhhhhCCEEEEecCC
Confidence            34568999995 999999999999999 79999999998887765532      26777888888999999999998876


Q ss_pred             C
Q 017977          127 P  127 (363)
Q Consensus       127 ~  127 (363)
                      +
T Consensus       249 ~  249 (414)
T COG0373         249 P  249 (414)
T ss_pred             C
Confidence            5

>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=96.16  E-value=0.025  Score=50.36  Aligned_cols=65  Identities=15%  Similarity=0.287  Sum_probs=45.8

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccC---CCEEEEccC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQG---STAVVNLAG  125 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~---~d~Vi~~a~  125 (363)
                      |+|.|+| .|.+|..+++.|++.|++|.+.+|++++.+.+...       +...  .++.++++++   +|+||-+..
T Consensus         1 m~Ig~IG-lG~mG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~-------g~~~--~~s~~~~~~~~~~advVi~~vp   68 (299)
T PRK12490          1 MKLGLIG-LGKMGGNMAERLREDGHEVVGYDVNQEAVDVAGKL-------GITA--RHSLEELVSKLEAPRTIWVMVP   68 (299)
T ss_pred             CEEEEEc-ccHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHC-------CCee--cCCHHHHHHhCCCCCEEEEEec
Confidence            4799998 79999999999999999999999988665544321       1111  2234444443   688887654

>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]

Probab=96.13  E-value=0.014  Score=51.04  Aligned_cols=68  Identities=24%  Similarity=0.344  Sum_probs=47.5

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCc---chHHhhccCCCEEEEccC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEE---PQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~---~~~~~~~~~~d~Vi~~a~  125 (363)
                      +|+|+|.| .|.+|+.+++.|.++|+.|.++.++.+........       ..++.|.   +.......++|+||-+..
T Consensus         3 ~~~v~IvG-~GliG~s~a~~l~~~g~~v~i~g~d~~~~~~~~a~-------~lgv~d~~~~~~~~~~~~~aD~VivavP   73 (279)
T COG0287           3 SMKVGIVG-LGLMGGSLARALKEAGLVVRIIGRDRSAATLKAAL-------ELGVIDELTVAGLAEAAAEADLVIVAVP   73 (279)
T ss_pred             CcEEEEEC-CchHHHHHHHHHHHcCCeEEEEeecCcHHHHHHHh-------hcCcccccccchhhhhcccCCEEEEecc
Confidence            45788888 89999999999999999998888877654332211       1334333   222556677899997664

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.11  E-value=0.047  Score=50.36  Aligned_cols=34  Identities=18%  Similarity=0.244  Sum_probs=29.5

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCC-EEEEEeCC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRS   83 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~   83 (363)
                      ...+|+|.| +|.+|+++++.|...|. ++++++++
T Consensus       134 ~~~~VlvvG-~GG~Gs~ia~~La~~Gvg~i~lvD~d  168 (376)
T PRK08762        134 LEARVLLIG-AGGLGSPAALYLAAAGVGTLGIVDHD  168 (376)
T ss_pred             hcCcEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            345899998 59999999999999996 78888887

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=96.11  E-value=0.017  Score=53.63  Aligned_cols=68  Identities=21%  Similarity=0.182  Sum_probs=50.4

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      ..+++|+|+| .|.+|+.++..|...|.+|+++++++.+.......       ++++.   .+.++++++|+||.+.+.
T Consensus       210 l~Gk~VlViG-~G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~~-------G~~v~---~l~eal~~aDVVI~aTG~  277 (425)
T PRK05476        210 IAGKVVVVAG-YGDVGKGCAQRLRGLGARVIVTEVDPICALQAAMD-------GFRVM---TMEEAAELGDIFVTATGN  277 (425)
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEcCCchhhHHHHhc-------CCEec---CHHHHHhCCCEEEECCCC
Confidence            3457999999 59999999999999999999999987654322111       22322   245667899999987753

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=96.10  E-value=0.05  Score=50.43  Aligned_cols=34  Identities=21%  Similarity=0.228  Sum_probs=28.9

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCC-EEEEEeCCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSR   84 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~   84 (363)
                      ..+|+|+| .|.+|.++++.|...|. ++++++.+.
T Consensus        42 ~~~VlviG-~GGlGs~va~~La~~Gvg~i~lvD~D~   76 (392)
T PRK07878         42 NARVLVIG-AGGLGSPTLLYLAAAGVGTLGIVEFDV   76 (392)
T ss_pred             cCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCE
Confidence            35899999 59999999999999995 788887654

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=96.09  E-value=0.062  Score=45.17  Aligned_cols=34  Identities=15%  Similarity=0.330  Sum_probs=29.5

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCC-EEEEEeCCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSR   84 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~   84 (363)
                      ..+|+|.| .|.+|..+++.|...|. ++++++.+.
T Consensus        28 ~~~V~ViG-~GglGs~ia~~La~~Gvg~i~lvD~D~   62 (212)
T PRK08644         28 KAKVGIAG-AGGLGSNIAVALARSGVGNLKLVDFDV   62 (212)
T ss_pred             CCCEEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            35899999 59999999999999995 688888873

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=96.05  E-value=0.022  Score=45.40  Aligned_cols=32  Identities=25%  Similarity=0.325  Sum_probs=29.1

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEe
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLT   81 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~   81 (363)
                      .+++|+|.|| |-+|...++.|++.|++|++++
T Consensus        12 ~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIs   43 (157)
T PRK06719         12 HNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVS   43 (157)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEc
Confidence            3469999996 9999999999999999999995

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=96.04  E-value=0.013  Score=52.34  Aligned_cols=73  Identities=25%  Similarity=0.199  Sum_probs=53.9

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      ++.+|+|+|+ |.+|..-++.+...|.+|++++|++++.+...+.+.   ...++..|.+..+..-+.+|+||.+++
T Consensus       166 pG~~V~I~G~-GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~lGA---d~~i~~~~~~~~~~~~~~~d~ii~tv~  238 (339)
T COG1064         166 PGKWVAVVGA-GGLGHMAVQYAKAMGAEVIAITRSEEKLELAKKLGA---DHVINSSDSDALEAVKEIADAIIDTVG  238 (339)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHhCC---cEEEEcCCchhhHHhHhhCcEEEECCC
Confidence            3469999997 599999999999999999999999988765544332   122333345555544445899999987

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=96.03  E-value=0.0091  Score=57.46  Aligned_cols=72  Identities=14%  Similarity=0.116  Sum_probs=48.4

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhh-ccCCCEEEEccCCC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC-IQGSTAVVNLAGTP  127 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~d~Vi~~a~~~  127 (363)
                      ..++++|+|+ |.+|++++..|.+.|++|++++|+.++.+.+.....      ......+++.+. ....|+|||+....
T Consensus       378 ~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l~------~~~~~~~~~~~~~~~~~diiINtT~vG  450 (529)
T PLN02520        378 AGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAVG------GQALTLADLENFHPEEGMILANTTSVG  450 (529)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhC------CceeeHhHhhhhccccCeEEEecccCC
Confidence            3468999998 899999999999999999999998766554432211      111222222222 23568899887653

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=96.02  E-value=0.083  Score=43.86  Aligned_cols=34  Identities=12%  Similarity=0.224  Sum_probs=28.5

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCC-EEEEEeCCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSR   84 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~   84 (363)
                      ..+|+|.|+ |.+|.++++.|...|. ++++++.+.
T Consensus        21 ~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d~   55 (197)
T cd01492          21 SARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDRT   55 (197)
T ss_pred             hCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECCc
Confidence            358999996 5599999999999995 788888764

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]

Probab=96.00  E-value=0.021  Score=39.64  Aligned_cols=35  Identities=34%  Similarity=0.504  Sum_probs=31.4

Q ss_pred             EEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcc
Q 017977           52 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA   87 (363)
Q Consensus        52 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~   87 (363)
                      +|+|.|| |++|-.++..|.+.|.+|+++.|++...
T Consensus         1 ~vvViGg-G~ig~E~A~~l~~~g~~vtli~~~~~~~   35 (80)
T PF00070_consen    1 RVVVIGG-GFIGIELAEALAELGKEVTLIERSDRLL   35 (80)
T ss_dssp             EEEEESS-SHHHHHHHHHHHHTTSEEEEEESSSSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHhCcEEEEEeccchhh
Confidence            5889995 9999999999999999999999988553

Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=96.00  E-value=0.021  Score=53.67  Aligned_cols=73  Identities=12%  Similarity=0.118  Sum_probs=49.0

Q ss_pred             CCccEEEEecC----------------cchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHH
Q 017977           48 ASQMTVSVTGA----------------TGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWR  111 (363)
Q Consensus        48 ~~~~~vlVtGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~  111 (363)
                      ..+++||||+|                ||..|.+|++++..+|++|+.+.-...- ... ..     ...+.+....++.
T Consensus       254 l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~~-~~p-~~-----v~~i~V~ta~eM~  326 (475)
T PRK13982        254 LAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVDL-ADP-QG-----VKVIHVESARQML  326 (475)
T ss_pred             cCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcCC-CCC-CC-----ceEEEecCHHHHH
Confidence            56789999986                7999999999999999999999743321 110 00     1113344444444


Q ss_pred             hhcc---CCCEEEEccCCC
Q 017977          112 DCIQ---GSTAVVNLAGTP  127 (363)
Q Consensus       112 ~~~~---~~d~Vi~~a~~~  127 (363)
                      +++.   ..|++|++|+..
T Consensus       327 ~av~~~~~~Di~I~aAAVa  345 (475)
T PRK13982        327 AAVEAALPADIAIFAAAVA  345 (475)
T ss_pred             HHHHhhCCCCEEEEecccc
Confidence            3332   379999999973

>PRK12491 pyrroline-5-carboxylate reductase; Reviewed

Probab=95.99  E-value=0.021  Score=50.10  Aligned_cols=66  Identities=12%  Similarity=0.137  Sum_probs=46.7

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCC----EEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNH----QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~----~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      |+|.++| +|.+|.++++.|++.|+    +|++.+|+..+.+.+....      ++...  ++..+.++++|+||-+.-
T Consensus         3 ~~IgfIG-~G~MG~aia~~L~~~g~~~~~~I~v~~r~~~~~~~l~~~~------g~~~~--~~~~e~~~~aDiIiLavk   72 (272)
T PRK12491          3 KQIGFIG-CGNMGIAMIGGMINKNIVSPDQIICSDLNVSNLKNASDKY------GITIT--TNNNEVANSADILILSIK   72 (272)
T ss_pred             CeEEEEC-ccHHHHHHHHHHHHCCCCCCceEEEECCCHHHHHHHHHhc------CcEEe--CCcHHHHhhCCEEEEEeC
Confidence            5899999 79999999999999874    7999998876655433211      12222  234455678899997654

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=95.98  E-value=0.041  Score=42.74  Aligned_cols=58  Identities=24%  Similarity=0.265  Sum_probs=47.0

Q ss_pred             CCCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           47 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        47 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      ...+++|+|.|.+.-+|+.|+..|.++|..|+.+.++..                       ++++.++++|+||-..+.
T Consensus        25 ~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~-----------------------~l~~~v~~ADIVvsAtg~   81 (140)
T cd05212          25 RLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTI-----------------------QLQSKVHDADVVVVGSPK   81 (140)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCc-----------------------CHHHHHhhCCEEEEecCC
Confidence            445679999999999999999999999999999875331                       355567888999888776


Q ss_pred             C
Q 017977          127 P  127 (363)
Q Consensus       127 ~  127 (363)
                      +
T Consensus        82 ~   82 (140)
T cd05212          82 P   82 (140)
T ss_pred             C
Confidence            3

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase

Probab=95.98  E-value=0.05  Score=44.38  Aligned_cols=78  Identities=17%  Similarity=0.209  Sum_probs=52.0

Q ss_pred             CCCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccC-cchHHhhccCCCEEEEccC
Q 017977           47 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAE-EPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        47 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~d~Vi~~a~  125 (363)
                      ...+++|+|+|-+..+|+.|+..|+++|..|+.++.+............   .......| ..++.+.++.+|+||-++|
T Consensus        59 ~l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~~~~~~~~~~~~~~~---hs~t~~~~~~~~l~~~~~~ADIVIsAvG  135 (197)
T cd01079          59 RLYGKTITIINRSEVVGRPLAALLANDGARVYSVDINGIQVFTRGESIR---HEKHHVTDEEAMTLDCLSQSDVVITGVP  135 (197)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEEecCcccccccccccc---cccccccchhhHHHHHhhhCCEEEEccC
Confidence            4556899999999999999999999999999988654422110000000   00111112 2246778889999998888


Q ss_pred             CC
Q 017977          126 TP  127 (363)
Q Consensus       126 ~~  127 (363)
                      .+
T Consensus       136 ~~  137 (197)
T cd01079         136 SP  137 (197)
T ss_pred             CC
Confidence            74

The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=95.96  E-value=0.022  Score=51.32  Aligned_cols=66  Identities=17%  Similarity=0.192  Sum_probs=50.0

Q ss_pred             CCCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           47 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        47 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      ....|+|.|+| .|.+|+.+++.|...|++|++.+|++.....         .  ..  -.+++.++++++|+|+-+...
T Consensus       143 ~l~g~~VgIIG-~G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~---------~--~~--~~~~l~ell~~aDiVil~lP~  208 (330)
T PRK12480        143 PVKNMTVAIIG-TGRIGAATAKIYAGFGATITAYDAYPNKDLD---------F--LT--YKDSVKEAIKDADIISLHVPA  208 (330)
T ss_pred             ccCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEeCChhHhhh---------h--hh--ccCCHHHHHhcCCEEEEeCCC
Confidence            34567999999 6999999999999999999999987643211         0  11  123577889999999876654

>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]

Probab=95.93  E-value=0.015  Score=50.73  Aligned_cols=66  Identities=18%  Similarity=0.327  Sum_probs=49.9

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccc-cCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL-IFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      ++|.++| .|-.|..++..|++.||+|++.+|++++... ....+       ...  .++..++..++|+||-+...
T Consensus         1 ~kIafIG-LG~MG~pmA~~L~~aG~~v~v~~r~~~ka~~~~~~~G-------a~~--a~s~~eaa~~aDvVitmv~~   67 (286)
T COG2084           1 MKIAFIG-LGIMGSPMAANLLKAGHEVTVYNRTPEKAAELLAAAG-------ATV--AASPAEAAAEADVVITMLPD   67 (286)
T ss_pred             CeEEEEc-CchhhHHHHHHHHHCCCEEEEEeCChhhhhHHHHHcC-------Ccc--cCCHHHHHHhCCEEEEecCC
Confidence            4789999 8999999999999999999999999988433 32211       122  22346677889999988764

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=95.93  E-value=0.01  Score=56.39  Aligned_cols=70  Identities=13%  Similarity=0.175  Sum_probs=48.2

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      ..++++|+|+ |.+|++++..|.+.|++|.+++|+..+.+.+.....      ....+.+++. .+.++|+||++...
T Consensus       331 ~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~~------~~~~~~~~~~-~l~~~DiVInatP~  400 (477)
T PRK09310        331 NNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASRCQ------GKAFPLESLP-ELHRIDIIINCLPP  400 (477)
T ss_pred             CCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc------cceechhHhc-ccCCCCEEEEcCCC
Confidence            4468999995 999999999999999999999998765544322110      0111112222 24678999999865

>PLN02256 arogenate dehydrogenase

Probab=95.92  E-value=0.018  Score=51.26  Aligned_cols=67  Identities=18%  Similarity=0.229  Sum_probs=45.8

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhc-cCCCEEEEccC
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI-QGSTAVVNLAG  125 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-~~~d~Vi~~a~  125 (363)
                      +.+|+|.|+| .|.+|..+++.|.+.|++|++++++... ......       ++  ....+..+++ .++|+||-+..
T Consensus        34 ~~~~kI~IIG-~G~mG~slA~~L~~~G~~V~~~d~~~~~-~~a~~~-------gv--~~~~~~~e~~~~~aDvVilavp  101 (304)
T PLN02256         34 SRKLKIGIVG-FGNFGQFLAKTFVKQGHTVLATSRSDYS-DIAAEL-------GV--SFFRDPDDFCEEHPDVVLLCTS  101 (304)
T ss_pred             CCCCEEEEEe-eCHHHHHHHHHHHhCCCEEEEEECccHH-HHHHHc-------CC--eeeCCHHHHhhCCCCEEEEecC
Confidence            3457999999 6999999999999999999999988632 111110       11  1123344444 46899997664

>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A

Probab=95.92  E-value=0.057  Score=40.57  Aligned_cols=86  Identities=20%  Similarity=0.203  Sum_probs=51.5

Q ss_pred             cEEEEecCc---chHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCCC
Q 017977           51 MTVSVTGAT---GFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  127 (363)
Q Consensus        51 ~~vlVtGat---G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~~  127 (363)
                      ++|.|.|++   +..|..+++.|.+.|++|+.+.-......              ...-..++.+.-..+|.++-+... 
T Consensus         1 ksiAVvGaS~~~~~~g~~v~~~l~~~G~~v~~Vnp~~~~i~--------------G~~~y~sl~e~p~~iDlavv~~~~-   65 (116)
T PF13380_consen    1 KSIAVVGASDNPGKFGYRVLRNLKAAGYEVYPVNPKGGEIL--------------GIKCYPSLAEIPEPIDLAVVCVPP-   65 (116)
T ss_dssp             -EEEEET--SSTTSHHHHHHHHHHHTT-EEEEESTTCSEET--------------TEE-BSSGGGCSST-SEEEE-S-H-
T ss_pred             CEEEEEcccCCCCChHHHHHHHHHhCCCEEEEECCCceEEC--------------cEEeeccccCCCCCCCEEEEEcCH-
Confidence            479999998   77999999999999999999865442211              111223344423567888866542 


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEecc
Q 017977          128 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVK  171 (363)
Q Consensus       128 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~  171 (363)
                                        ..+..+++.|.+  .+++.+++.++.
T Consensus        66 ------------------~~~~~~v~~~~~--~g~~~v~~~~g~   89 (116)
T PF13380_consen   66 ------------------DKVPEIVDEAAA--LGVKAVWLQPGA   89 (116)
T ss_dssp             ------------------HHHHHHHHHHHH--HT-SEEEE-TTS
T ss_pred             ------------------HHHHHHHHHHHH--cCCCEEEEEcch
Confidence                              123367778877  688888887764

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=95.92  E-value=0.013  Score=53.46  Aligned_cols=75  Identities=20%  Similarity=0.154  Sum_probs=49.7

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccC-CCCCccccCcccccCcchHHhhc-----cCCCEEEE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF-PGKKTRFFPGVMIAEEPQWRDCI-----QGSTAVVN  122 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~-----~~~d~Vi~  122 (363)
                      ...+|+|+||+|.+|..+++.+...|.+|++++++..+.+... ..+.   ...+|..+.+.+.+.+     .++|+||.
T Consensus       158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa---~~vi~~~~~~~~~~~i~~~~~~gvD~v~d  234 (348)
T PLN03154        158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGF---DEAFNYKEEPDLDAALKRYFPEGIDIYFD  234 (348)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCC---CEEEECCCcccHHHHHHHHCCCCcEEEEE
Confidence            3468999999999999999999999999999988776655432 1111   1112322222232222     26899999


Q ss_pred             ccCC
Q 017977          123 LAGT  126 (363)
Q Consensus       123 ~a~~  126 (363)
                      +.|.
T Consensus       235 ~vG~  238 (348)
T PLN03154        235 NVGG  238 (348)
T ss_pred             CCCH
Confidence            8873

>PLN03139 formate dehydrogenase; Provisional

Probab=95.91  E-value=0.023  Score=52.17  Aligned_cols=70  Identities=26%  Similarity=0.196  Sum_probs=51.2

Q ss_pred             CCCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           47 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        47 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      ...+++|.|+| .|.||+.+++.|..-|.+|.+++|...+.+....         ..+...++++++++.+|+|+.+...
T Consensus       196 ~L~gktVGIVG-~G~IG~~vA~~L~afG~~V~~~d~~~~~~~~~~~---------~g~~~~~~l~ell~~sDvV~l~lPl  265 (386)
T PLN03139        196 DLEGKTVGTVG-AGRIGRLLLQRLKPFNCNLLYHDRLKMDPELEKE---------TGAKFEEDLDAMLPKCDVVVINTPL  265 (386)
T ss_pred             CCCCCEEEEEe-ecHHHHHHHHHHHHCCCEEEEECCCCcchhhHhh---------cCceecCCHHHHHhhCCEEEEeCCC
Confidence            45568999999 7999999999999999999999887533221111         1122234688889999999977643

>PRK08818 prephenate dehydrogenase; Provisional

Probab=95.89  E-value=0.029  Score=51.14  Aligned_cols=56  Identities=20%  Similarity=0.183  Sum_probs=42.7

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhC-CCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      .++|.|+|.+|.+|..+++.|.+. |++|+++++....                    .....+.+.++|+||-|..
T Consensus         4 ~~~I~IIGl~GliGgslA~alk~~~~~~V~g~D~~d~~--------------------~~~~~~~v~~aDlVilavP   60 (370)
T PRK08818          4 QPVVGIVGSAGAYGRWLARFLRTRMQLEVIGHDPADPG--------------------SLDPATLLQRADVLIFSAP   60 (370)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCCEEEEEcCCccc--------------------cCCHHHHhcCCCEEEEeCC
Confidence            369999999999999999999975 8999999874110                    1123456778899987764

>PRK13243 glyoxylate reductase; Reviewed

Probab=95.88  E-value=0.021  Score=51.61  Aligned_cols=68  Identities=16%  Similarity=0.147  Sum_probs=50.7

Q ss_pred             CCCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           47 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        47 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      ...+++|.|+| .|.||+.+++.|...|.+|++++|........        ..+..   ..++.++++++|+|+.+...
T Consensus       147 ~L~gktvgIiG-~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~--------~~~~~---~~~l~ell~~aDiV~l~lP~  214 (333)
T PRK13243        147 DVYGKTIGIIG-FGRIGQAVARRAKGFGMRILYYSRTRKPEAEK--------ELGAE---YRPLEELLRESDFVSLHVPL  214 (333)
T ss_pred             CCCCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEECCCCChhhHH--------HcCCE---ecCHHHHHhhCCEEEEeCCC
Confidence            44568999999 59999999999999999999999875432110        01111   23577889999999987754

>PLN02928 oxidoreductase family protein

Probab=95.87  E-value=0.032  Score=50.72  Aligned_cols=78  Identities=18%  Similarity=0.059  Sum_probs=52.6

Q ss_pred             CCCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccC---CCCCccccCcccccCcchHHhhccCCCEEEEc
Q 017977           47 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF---PGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNL  123 (363)
Q Consensus        47 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~  123 (363)
                      ...+++|.|+| .|-||+.+++.|..-|.+|++++|+..+.....   +........ .......++.+++.++|+|+.+
T Consensus       156 ~l~gktvGIiG-~G~IG~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~L~ell~~aDiVvl~  233 (347)
T PLN02928        156 TLFGKTVFILG-YGAIGIELAKRLRPFGVKLLATRRSWTSEPEDGLLIPNGDVDDLV-DEKGGHEDIYEFAGEADIVVLC  233 (347)
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHhhCCCEEEEECCCCChhhhhhhccccccccccc-cccCcccCHHHHHhhCCEEEEC
Confidence            45568999999 699999999999999999999998743221110   000000000 0111456788999999999987


Q ss_pred             cCC
Q 017977          124 AGT  126 (363)
Q Consensus       124 a~~  126 (363)
                      ...
T Consensus       234 lPl  236 (347)
T PLN02928        234 CTL  236 (347)
T ss_pred             CCC
Confidence            764

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.86  E-value=0.03  Score=49.28  Aligned_cols=57  Identities=25%  Similarity=0.412  Sum_probs=46.7

Q ss_pred             CCCccEEEEecCcchHHHHHHHHHHhCCCEEEEEe-CCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           47 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLT-RSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        47 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      ...+++|+|+|-+|.+|+.++..|+++|+.|++.. |+.                        .+.+..+.+|+||-+.+
T Consensus       155 ~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~------------------------~l~e~~~~ADIVIsavg  210 (296)
T PRK14188        155 DLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTR------------------------DLPAVCRRADILVAAVG  210 (296)
T ss_pred             CCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCC------------------------CHHHHHhcCCEEEEecC
Confidence            34568999999999999999999999999999984 432                        14566778899998887


Q ss_pred             CC
Q 017977          126 TP  127 (363)
Q Consensus       126 ~~  127 (363)
                      .+
T Consensus       211 ~~  212 (296)
T PRK14188        211 RP  212 (296)
T ss_pred             Ch
Confidence            63

>PTZ00142 6-phosphogluconate dehydrogenase; Provisional

Probab=95.85  E-value=0.029  Score=53.07  Aligned_cols=41  Identities=17%  Similarity=0.361  Sum_probs=36.3

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF   91 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~   91 (363)
                      |.+|.|+| .|-+|..++..|+++||+|.+.+|+++..+.+.
T Consensus         1 ~~~IgvIG-LG~MG~~lA~nL~~~G~~V~v~dr~~~~~~~l~   41 (470)
T PTZ00142          1 MSDIGLIG-LAVMGQNLALNIASRGFKISVYNRTYEKTEEFV   41 (470)
T ss_pred             CCEEEEEe-EhHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH
Confidence            35799999 799999999999999999999999998866554

>PRK04207 glyceraldehyde-3-phosphate dehydrogenase; Provisional

Probab=95.85  E-value=0.086  Score=47.81  Aligned_cols=76  Identities=18%  Similarity=0.270  Sum_probs=44.9

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhC-CCEEEEEeCCCCc-ccccCCCC--Cc-------cc-cCcccccCcchHHhhccCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSK-AELIFPGK--KT-------RF-FPGVMIAEEPQWRDCIQGS  117 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~-~~~~~~~~--~~-------~~-~~~~d~~~~~~~~~~~~~~  117 (363)
                      |+||.|.|+ |.+|+.+++.+.++ +.++.++...... ...+....  ..       .. +....+.-.+.+.+.+.++
T Consensus         1 ~ikVaI~G~-GrIGr~va~al~~~~d~eLvav~d~~~~~~~~la~~~G~~~~~~~~~~~~~~~~~~i~V~~~~~el~~~v   79 (341)
T PRK04207          1 MIKVGVNGY-GTIGKRVADAVAAQPDMELVGVAKTKPDYEARVAVEKGYPLYVADPEREKAFEEAGIPVAGTIEDLLEKA   79 (341)
T ss_pred             CeEEEEECC-CHHHHHHHHHHhcCCCcEEEEEECCChHHHHHHHHhcCCCccccCccccccccCCceEEcCChhHhhccC
Confidence            469999998 99999999998864 5788888753321 11110000  00       00 0001111123455666789


Q ss_pred             CEEEEccCC
Q 017977          118 TAVVNLAGT  126 (363)
Q Consensus       118 d~Vi~~a~~  126 (363)
                      |+||.+++.
T Consensus        80 DVVIdaT~~   88 (341)
T PRK04207         80 DIVVDATPG   88 (341)
T ss_pred             CEEEECCCc
Confidence            999999865

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=95.82  E-value=0.017  Score=52.11  Aligned_cols=74  Identities=18%  Similarity=0.089  Sum_probs=49.8

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcc---hHHhhc-cCCCEEEEccC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEP---QWRDCI-QGSTAVVNLAG  125 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~~-~~~d~Vi~~a~  125 (363)
                      ..+|+|+||+|.+|..+++.+...|.+|+++++++++.+.+...+.   ..-+|..+.+   .+.+.. .++|+|+++.+
T Consensus       144 g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~~Ga---~~vi~~~~~~~~~~v~~~~~~gvd~vld~~g  220 (329)
T cd08294         144 GETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKELGF---DAVFNYKTVSLEEALKEAAPDGIDCYFDNVG  220 (329)
T ss_pred             CCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCC---CEEEeCCCccHHHHHHHHCCCCcEEEEECCC
Confidence            4689999999999999999999999999999988766554433211   1112222222   122221 36899999876


Q ss_pred             C
Q 017977          126 T  126 (363)
Q Consensus       126 ~  126 (363)
                      .
T Consensus       221 ~  221 (329)
T cd08294         221 G  221 (329)
T ss_pred             H
Confidence            3

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	363
3oh8_A	516	Crystal Structure Of The Nucleoside-Diphosphate Sug		2e-35
4b4o_A	298	Crystal Structure Of Human Epimerase Family Protein		3e-27

>pdb|3OH8|A Chain A, Crystal Structure Of The Nucleoside-Diphosphate Sugar Epimerase From Corynebacterium Glutamicum. Northeast Structural Genomics Consortium Target Cgr91 Length = 516

Iteration: 1
 Score =  146 bits (368), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 103/319 (32%), Positives = 155/319 (48%), Gaps = 33/319 (10%)
Query: 47  KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAE 106
             S +TV++TG+ G +GR L  +LQ   H+V  L R   K     PGK  RF+  +  A 
Sbjct: 144 DGSPLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPK-----PGK--RFWDPLNPAS 196
Query: 107 EPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSV 166
                D + G+  +V+LAG PI  R++   K+ I+ESR+  T  + +L+ ES +    + 
Sbjct: 197 -----DLLDGADVLVHLAGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCT--TX 249
Query: 167 LELVKPKYLMRAAHQEMITWLS----DYCAKVYCLVSFNRGVLVCREWE-GTALKVNKDV 221
           +      +       E++T  S    D+ A+            VCR+WE  TA   +   
Sbjct: 250 ISASAVGFYGHDRGDEILTEESESGDDFLAE------------VCRDWEHATAPASDAGK 297
Query: 222 RLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS 281
           R+A IR G+ L   GG L  +  LF    GG  G G  WFSWI +DD+ ++ Y A+ +  
Sbjct: 298 RVAFIRTGVALSGRGGXLPLLKTLFSTGLGGKFGDGTSWFSWIAIDDLTDIYYRAIVDAQ 357
Query: 282 YRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLG-EGA-FVVLEGQRVVP 339
             G IN  APNPV  A+    L     RP+++ +P    K +LG +GA  + L  QR  P
Sbjct: 358 ISGPINAVAPNPVSNADXTKILATSXHRPAFIQIPSLGPKILLGSQGAEELALASQRTAP 417
Query: 340 ARAKELGFPFKYRYVKDAL 358
           A  + L   F+Y  +  A+
Sbjct: 418 AALENLSHTFRYTDIGAAI 436

>pdb|4B4O|A Chain A, Crystal Structure Of Human Epimerase Family Protein Sdr39u1 (Isoform2) With Nadph Length = 298

Iteration: 1
 Score =  119 bits (297), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 100/313 (31%), Positives = 150/313 (47%), Gaps = 28/313 (8%)
Query: 53  VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRD 112
           V V G TGFIG  L Q L A  H+V +++R         PG      PG +  +E     
Sbjct: 3   VLVGGGTGFIGTALTQLLNARGHEVTLVSRK--------PG------PGRITWDELA-AS 47
Query: 113 CIQGSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLEL 169
            +    A VNLAG  I     RW+   +KE+  SR+  T  +   I ++P+  +  VL  
Sbjct: 48  GLPSCDAAVNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVL-- 105
Query: 170 VKPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIG 229
                   A +Q  +T   D  +       F+    +  +WE  A       R  ++R G
Sbjct: 106 ----VTGVAYYQPSLTAEYDEDSPGGDFDFFSN---LVTKWEAAARLPGDSTRQVVVRSG 158
Query: 230 IVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGT 289
           +VLG+ GGA    +  F +  GGP+GSG Q+F WIH+ D+  ++  AL      GV+NG 
Sbjct: 159 VVLGRGGGAXGHXLLPFRLGLGGPIGSGHQFFPWIHIGDLAGILTHALEANHVHGVLNGV 218
Query: 290 APNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLG-EGAFVVLEGQRVVPARAKELGFP 348
           AP+    AE     G  LGR +++P+P   ++AV G + A  +LEGQ+V+P R    G+ 
Sbjct: 219 APSSATNAEFAQTFGAALGRRAFIPLPSAVVQAVFGRQRAIXLLEGQKVIPRRTLATGYQ 278
Query: 349 FKYRYVKDALKAI 361
           + +  +  ALK I
Sbjct: 279 YSFPELGAALKEI 291

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	363
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	1e-116
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	2e-18
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	2e-16
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	8e-16
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	1e-15
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	1e-15
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	1e-14
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	2e-07
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	5e-14
1xq6_A	253	Unknown protein; structural genomics, protein stru	9e-14
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	7e-13
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	2e-12
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	2e-10
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	2e-10
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	4e-10
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	2e-09
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	1e-08
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	1e-08
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	1e-08
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	4e-08
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	4e-08
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	1e-07
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	1e-07
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	2e-07
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	3e-07
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	3e-05
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	5e-07
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	6e-07
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	9e-07
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	1e-06
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	1e-06
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	2e-06
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	2e-06
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	3e-06
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	4e-06
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	5e-06
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	3e-04
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	6e-06
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	7e-06
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	7e-06
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	1e-05
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	2e-05
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	2e-05
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	2e-05
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	3e-05
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	5e-05
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	8e-05
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	9e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	9e-05
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	1e-04
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	2e-04
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	2e-04
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	5e-04
2yjz_A	201	Metalloreductase steap4; oxidoreductase, metabolic	5e-04
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	8e-04

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} Length = 516

 Score =  345 bits (888), Expect = e-116
 Identities = 94/338 (27%), Positives = 144/338 (42%), Gaps = 59/338 (17%)

Query: 44  HTQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVM 103
                S +TV++TG+ G +GR L  +LQ   H+V  L R   K    F            
Sbjct: 141 TLFDGSPLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPGKRFWDPLN------- 193

Query: 104 IAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVR 163
                   D + G+  +V+LAG PI  R++   K+ I+ESR+  T  + +L+ ES     
Sbjct: 194 -----PASDLLDGADVLVHLAGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAEST---- 244

Query: 164 PSVLELVKPKYLMRA---------AHQEMIT--------WLSDYCAKVYCLVSFNRGVLV 206
                  +   ++ A            E++T        +L++                V
Sbjct: 245 -------QCTTMISASAVGFYGHDRGDEILTEESESGDDFLAE----------------V 281

Query: 207 CREWEGTALKVNKD-VRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIH 265
           CR+WE      +    R+A IR G+ L   GG L  +  LF    GG  G G  WFSWI 
Sbjct: 282 CRDWEHATAPASDAGKRVAFIRTGVALSGRGGMLPLLKTLFSTGLGGKFGDGTSWFSWIA 341

Query: 266 LDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLG 325
           +DD+ ++ Y A+ +    G IN  APNPV  A+M   L   + RP+++ +P    K +LG
Sbjct: 342 IDDLTDIYYRAIVDAQISGPINAVAPNPVSNADMTKILATSMHRPAFIQIPSLGPKILLG 401

Query: 326 EGA--FVVLEGQRVVPARAKELGFPFKYRYVKDALKAI 361
                 + L  QR  PA  + L   F+Y  +  A+   
Sbjct: 402 SQGAEELALASQRTAPAALENLSHTFRYTDIGAAIAHE 439

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} Length = 286

 Score = 83.4 bits (206), Expect = 2e-18
 Identities = 64/329 (19%), Positives = 111/329 (33%), Gaps = 64/329 (19%)

Query: 48  ASQMT--VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIA 105
           ++ MT  +   G  G+  R L + L     ++   +R+  + E I          G    
Sbjct: 1   SNAMTGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRAS-------GAEPL 52

Query: 106 EEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPS 165
             P     + G T ++                                 I+ +P+     
Sbjct: 53  LWPGEEPSLDGVTHLL---------------------------------ISTAPDSGGDP 79

Query: 166 VLELVKPKYLMRAAHQEMITWLS------DYCAKVY-----CLVSFNRGVLVCREWEGTA 214
           VL  +  +   RAA    + +LS      D+             +  RG       +   
Sbjct: 80  VLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPTAARGRWRVMAEQ--Q 137

Query: 215 LKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY 274
            +   ++ L + R+  + G   G  +K+    +     P     Q FS IH++DI  ++ 
Sbjct: 138 WQAVPNLPLHVFRLAGIYGPGRGPFSKLGKGGIRRIIKP----GQVFSRIHVEDIAQVLA 193

Query: 275 EALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFV-VLE 333
            +++ P    V N     PV   ++  +   + G P  LP      KA L   A     E
Sbjct: 194 ASMARPDPGAVYNVCDDEPVPPQDVIAYAAELQGLP--LPPAVDFDKADLTPMARSFYSE 251

Query: 334 GQRVVPARAK-ELGFPFKYRYVKDALKAI 361
            +RV   R K ELG   KY   +  L+A+
Sbjct: 252 NKRVRNDRIKEELGVRLKYPNYRVGLEAL 280

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224

 Score = 76.6 bits (188), Expect = 2e-16
 Identities = 36/234 (15%), Positives = 71/234 (30%), Gaps = 27/234 (11%)

Query: 51  MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 110
           M ++V GATG  G  +V   +   H+V  + R   KA     G        ++       
Sbjct: 1   MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADR-LGATVA---TLVKEPLVLT 56

Query: 111 RDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELV 170
              +    AVV+    P G+              +   + +V L+  S        +   
Sbjct: 57  EADLDSVDAVVDALSVPWGSGRG--------YLHLDFATHLVSLLRNS--DTLAVFILGS 106

Query: 171 KPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGI 230
               +  A H  ++ +     ++ +          + + +E   L++N +V    I    
Sbjct: 107 ASLAMPGADHPMILDFPESAASQPW------YDGALYQYYEYQFLQMNANVNWIGISPSE 160

Query: 231 VLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRG 284
                                  L  G+   S I   ++   I + L +P+   
Sbjct: 161 AFPSGPATSYV-------AGKDTLLVGEDGQSHITTGNMALAILDQLEHPTAIR 207

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score = 76.6 bits (189), Expect = 8e-16
 Identities = 39/293 (13%), Positives = 96/293 (32%), Gaps = 39/293 (13%)

Query: 45  TQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMI 104
           ++  + +  +V GATG +G    + ++A  H + ++ R  S+ +      +        +
Sbjct: 8   SRPGAHVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQR-LAYLEPECRVA-EM 65

Query: 105 AEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVR- 163
            +       ++G   V+  AG            +E   S +  T+       ++   V  
Sbjct: 66  LDHAGLERALRGLDGVIFSAGY---YPSRPRRWQEEVASALGQTNPFYAACLQA--RVPR 120

Query: 164 ------PSVLELVKPKYLMR--AAHQEMITWLSDYC-AKVYCLVSFNRGVLVCREWEGTA 214
                    +              +  + +  S Y   K                 +  A
Sbjct: 121 ILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWAL--------------DEQA 166

Query: 215 LKVNKD-VRLALIRIGIVLG-KDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL 272
            +  ++ + + +   G+VLG  D G     + +  +  G          + I   +    
Sbjct: 167 REQARNGLPVVIGIPGMVLGELDIGPTTGRV-ITAIGNGEMTHYVAGQRNVIDAAEAGRG 225

Query: 273 IYEALSNPSYRG--VINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAV 323
           +  AL         ++ G   + + +A++   +  +LG+P+  P+     +A+
Sbjct: 226 LLMALERGRIGERYLLTG---HNLEMADLTRRIAELLGQPAPQPMSMAMARAL 275

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219

 Score = 74.3 bits (183), Expect = 1e-15
 Identities = 13/77 (16%), Positives = 33/77 (42%), Gaps = 3/77 (3%)

Query: 51  MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 110
           M + + G+TG +G+ L++ L   ++Q+    R   +          +     +     + 
Sbjct: 1   MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY---NNVKAVHFDVDWTPEEM 57

Query: 111 RDCIQGSTAVVNLAGTP 127
              + G  A++N++G+ 
Sbjct: 58  AKQLHGMDAIINVSGSG 74

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236

 Score = 74.3 bits (183), Expect = 1e-15
 Identities = 17/86 (19%), Positives = 29/86 (33%), Gaps = 3/86 (3%)

Query: 41  TSDHTQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFP 100
           +         M V V GA G + R L+  L+   H+   + R+  +   +     +    
Sbjct: 12  SGRENLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVV 71

Query: 101 GVMIAEEPQWRDCIQGSTAVVNLAGT 126
                 E  +        AVV  AG+
Sbjct: 72  A---NLEEDFSHAFASIDAVVFAAGS 94

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286

 Score = 72.0 bits (177), Expect = 1e-14
 Identities = 18/147 (12%), Positives = 40/147 (27%), Gaps = 20/147 (13%)

Query: 220 DVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN 279
                ++R   + G     + +              +   W + IH DD    I   +  
Sbjct: 146 AYSSTILRFSGIYGPGRLRMIRQA-----QTPEQWPARNAWTNRIHRDDGAAFIAYLIQQ 200

Query: 280 PSY---RGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQR 336
            S+     +   T   P+ + ++   L +  G                          ++
Sbjct: 201 RSHAVPERLYIVTDNQPLPVHDLLRWLADRQGIAYPAGATPPV------------QGNKK 248

Query: 337 VVPARAKELGFPFKYRYVKDALKAIMS 363
           +  AR    G+   Y        A+++
Sbjct: 249 LSNARLLASGYQLIYPDYVSGYGALLA 275

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286

 Score = 50.9 bits (122), Expect = 2e-07
 Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 1/41 (2%)

Query: 49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL 89
          S   + + G  G +G  L +RL A  H+V  L RS      
Sbjct: 2  SLSKILIAGC-GDLGLELARRLTAQGHEVTGLRRSAQPMPA 41

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227

 Score = 69.7 bits (171), Expect = 5e-14
 Identities = 29/242 (11%), Positives = 73/242 (30%), Gaps = 36/242 (14%)

Query: 48  ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEE 107
                + + GA+GF+G  L+        +V  + R   K ++       +      ++  
Sbjct: 2   EKVKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIENEH--LKVKKAD-VSSL 58

Query: 108 PQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVL 167
            +  +  +G+ AV++                +I +  I+V   ++D + ++  GV   + 
Sbjct: 59  DEVCEVCKGADAVISAFNPGWN-------NPDIYDETIKVYLTIIDGVKKA--GVNRFL- 108

Query: 168 ELVKPKYL-----MRAAHQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVR 222
                  +     +  A    +    +    +         V    E+    L   K++ 
Sbjct: 109 ------MVGGAGSLFIAPGLRLMDSGEVPENILPG------VKALGEFYLNFLMKEKEID 156

Query: 223 LALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSY 282
                    +   G    +            +       S I ++D    + + L +P +
Sbjct: 157 WVFFSPAADMR-PGVRTGRYR-----LGKDDMIVDIVGNSHISVEDYAAAMIDELEHPKH 210

Query: 283 RG 284
             
Sbjct: 211 HQ 212

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253

 Score = 69.5 bits (170), Expect = 9e-14
 Identities = 43/274 (15%), Positives = 82/274 (29%), Gaps = 35/274 (12%)

Query: 48  ASQMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGKKTRFFPGVMIA 105
           A+  TV VTGA+G  G+ + ++L+  +     + L RS    E I             I 
Sbjct: 2   ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGD---IT 58

Query: 106 EEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPS 165
           +        QG  A+V L       +   +  K  +                  +G  P 
Sbjct: 59  DADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPE------------FIFEDGQYPE 106

Query: 166 VLELVKPKYLMRAAHQE------MITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNK 219
            ++ +  K  + AA         ++  +             N  +LV +      L  + 
Sbjct: 107 QVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLA-DS 165

Query: 220 DVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN 279
                +IR G +L K+GG    ++            +       +   D+  +  +AL  
Sbjct: 166 GTPYTIIRAGGLLDKEGGVRELLVGKDDELLQTDTKT-------VPRADVAEVCIQALLF 218

Query: 280 PSYRG----VINGTAPNPVRLAEMCDHLGNVLGR 309
              +     + +          +       V  R
Sbjct: 219 EEAKNKAFDLGSKPEGTSTPTKDFKALFSQVTSR 252

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206

 Score = 65.8 bits (161), Expect = 7e-13
 Identities = 17/84 (20%), Positives = 30/84 (35%), Gaps = 12/84 (14%)

Query: 49  SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMI---- 104
           +   +++ GATG  G   + +     ++V VL R  S+     P           +    
Sbjct: 2   AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGP-------RPAHVVVGD 54

Query: 105 AEEPQW-RDCIQGSTAVVNLAGTP 127
             +       + G  AV+ L GT 
Sbjct: 55  VLQAADVDKTVAGQDAVIVLLGTR 78

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221

 Score = 64.6 bits (157), Expect = 2e-12
 Identities = 27/234 (11%), Positives = 62/234 (26%), Gaps = 29/234 (12%)

Query: 51  MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 110
           M + + GATG  G R+++  +   H+V  + R+  K               +        
Sbjct: 1   MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTHKDINI-----LQKDIFDLT 55

Query: 111 RDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELV 170
              +     VV+  G             +  E  +     ++ ++N +       +L + 
Sbjct: 56  LSDLSDQNVVVDAYGIS----------PDEAEKHVTSLDHLISVLNGT--VSPR-LLVVG 102

Query: 171 KPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGI 230
               L        +          Y   +         +          +     I    
Sbjct: 103 GAASLQIDEDGNTLLESKGLREAPYYPTARA-----QAKQLEHLKSHQAEFSWTYISPSA 157

Query: 231 VLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRG 284
           +    G               G  G+     S+I ++D    + + +  P++  
Sbjct: 158 MFE-PGERTGDYQIGKDHLLFGSDGN-----SFISMEDYAIAVLDEIERPNHLN 205

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236

 Score = 59.4 bits (144), Expect = 2e-10
 Identities = 14/92 (15%), Positives = 26/92 (28%), Gaps = 13/92 (14%)

Query: 42  SDHTQKASQMTVSVTGATGFIGRRLVQRL-QADNHQVRVLTRSRSKAELIFPGKKTRFFP 100
            +   +     V + GA G I R ++ +L      +  +  R  +K    +P        
Sbjct: 15  ENLYFQGHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYP-------T 67

Query: 101 GVMIAE-----EPQWRDCIQGSTAVVNLAGTP 127
              I           +  +QG   V       
Sbjct: 68  NSQIIMGDVLNHAALKQAMQGQDIVYANLTGE 99

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364

 Score = 60.5 bits (146), Expect = 2e-10
 Identities = 38/289 (13%), Positives = 89/289 (30%), Gaps = 32/289 (11%)

Query: 55  VTGATGFIGRRLVQRLQADNH-----QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQ 109
           + G TG IG  L + L   +      +V  + R    A          +     I++   
Sbjct: 6   IVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPA--WHEDNPINYVQCD-ISDPDD 62

Query: 110 WRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLEL 169
            +  +   T V ++         S+E  +E  E+  ++   V+D +  +   ++   L+ 
Sbjct: 63  SQAKLSPLTDVTHVFYV-TWANRSTE--QENCEANSKMFRNVLDAVIPNCPNLKHISLQT 119

Query: 170 VKPKYLMR----AAHQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLAL 225
            +  Y+         +      ++   ++  +  +     +  E         + +  ++
Sbjct: 120 GRKHYMGPFESYGKIESHDPPYTEDLPRLKYMNFYYDLEDIMLEEVEKK----EGLTWSV 175

Query: 226 IRIGIVLGKDGGALAKMIPLFMMFA------GGPL---GSGQQWFSWIHLDDIVNLIYE- 275
            R G + G    ++  ++    ++A      G  L   G    W  +    D   +    
Sbjct: 176 HRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLIAEHH 235

Query: 276 --ALSNPSYRG-VINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALK 321
             A  +P  +    N +  +  +       L    G           LK
Sbjct: 236 IWAAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGVECGEYEEGVDLK 284

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242

 Score = 58.7 bits (142), Expect = 4e-10
 Identities = 16/78 (20%), Positives = 25/78 (32%)

Query: 49  SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEP 108
              +V + GA+G  GR L++ +       +V    R K        K      V   +  
Sbjct: 17  QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLD 76

Query: 109 QWRDCIQGSTAVVNLAGT 126
            +    QG        GT
Sbjct: 77  DYASAFQGHDVGFCCLGT 94

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 215

 Score = 56.2 bits (136), Expect = 2e-09
 Identities = 16/89 (17%), Positives = 28/89 (31%), Gaps = 6/89 (6%)

Query: 47  KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAE 106
            ++   V + GATG  G  L+ R+ ++    +V+  +R    L    +        +   
Sbjct: 2   HSTPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARK--ALAEHPR----LDNPVGPL 55

Query: 107 EPQWRDCIQGSTAVVNLAGTPIGTRWSSE 135
                             GT I    S E
Sbjct: 56  AELLPQLDGSIDTAFCCLGTTIKEAGSEE 84

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267

 Score = 54.3 bits (131), Expect = 1e-08
 Identities = 17/74 (22%), Positives = 28/74 (37%), Gaps = 5/74 (6%)

Query: 55  VTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI 114
           VTGA G +GR + +RL      +R+   S         G          +A+       +
Sbjct: 8   VTGAAGQLGRVMRERLAPMAEILRLADLSPLDP----AGPNEECVQC-DLADANAVNAMV 62

Query: 115 QGSTAVVNLAGTPI 128
            G   +V+L G  +
Sbjct: 63  AGCDGIVHLGGISV 76

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313

 Score = 54.9 bits (132), Expect = 1e-08
 Identities = 41/297 (13%), Positives = 92/297 (30%), Gaps = 50/297 (16%)

Query: 48  ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFP-GVMIAE 106
             +  V + G TG+IG+R+V    +  H   VL R    + +        F   G  + E
Sbjct: 2   DKKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIE 61

Query: 107 -----EPQWRDCIQGSTAVVN-LAGTPIGTRWSSEIK-----KEIKESRIRVTSKVVDLI 155
                  +  D ++    V++ LAG  +      ++K     KE    +  + S+     
Sbjct: 62  ASLDDHQRLVDALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDP 121

Query: 156 NESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTAL 215
           +     ++P  +  +  + + RA     I +             +  G L   + +G  +
Sbjct: 122 DIMEHALQPGSITFIDKRKVRRAIEAASIPYTYVSS---NMFAGYFAGSL--AQLDGHMM 176

Query: 216 KVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE 275
                V +                               G G     W+  DD+     +
Sbjct: 177 PPRDKVLI------------------------------YGDGNVKGIWVDEDDVGTYTIK 206

Query: 276 ALSNPS--YRGVINGTAPNPVRLAEMCDHLGNVLGRPSW-LPVPEFALKAVLGEGAF 329
           ++ +P    + +      N +   E+      +  +    + +      A + + ++
Sbjct: 207 SIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSEQNLDKIYISSQDFLADMKDKSY 263

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A Length = 369

 Score = 54.9 bits (132), Expect = 1e-08
 Identities = 49/277 (17%), Positives = 86/277 (31%), Gaps = 59/277 (21%)

Query: 51  MTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQ 109
           M + +TGA GF+G+ L   L +  +H +  + R   + EL                    
Sbjct: 1   MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQTKEEEL-------------------- 40

Query: 110 WRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLEL 169
               +  +  +V+LAG         E  KE     +     V+D++  +           
Sbjct: 41  -ESALLKADFIVHLAGVN-----RPEHDKEFSLGNVSYLDHVLDILTRNT---------- 84

Query: 170 VKPKYLMRAAHQEMITWLSDY-CAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRI 228
            KP  L+ ++ Q   T  + Y  +K+              E             + + R 
Sbjct: 85  KKPAILLSSSIQA--TQDNPYGESKLQG------------EQLLREYAEEYGNTVYIYRW 130

Query: 229 GIVLGKDG-GALAKMIPLF--MMFAGGPL--GSGQQWFSWIHLDDIVNLIYEALSNPSYR 283
             + GK        +I  F   +     +         +  ++DDIV  I  A+      
Sbjct: 131 PNLFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKRAIEGTPTI 190

Query: 284 --GVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEF 318
             GV        V L E+ D L           +P+ 
Sbjct: 191 ENGVPTVPNVFKVTLGEIVDLLYKFKQSRLDRTLPKL 227

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308

 Score = 53.4 bits (128), Expect = 4e-08
 Identities = 16/87 (18%), Positives = 33/87 (37%), Gaps = 7/87 (8%)

Query: 48  ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFF--PGVMI- 104
            S+  + + GATG+IGR + +      H   +L R  + +      +    F   G  I 
Sbjct: 2   GSRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIV 61

Query: 105 ----AEEPQWRDCIQGSTAVVNLAGTP 127
                +     + ++    V++  G+ 
Sbjct: 62  HGSIDDHASLVEAVKNVDVVISTVGSL 88

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} Length = 289

 Score = 53.1 bits (128), Expect = 4e-08
 Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 1/43 (2%)

Query: 51 MTVSVTGATGFIGRRLVQRL-QADNHQVRVLTRSRSKAELIFP 92
          M + +TGATG +G  +  +          +  R+  K    + 
Sbjct: 1  MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWR 43

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267

 Score = 51.2 bits (123), Expect = 1e-07
 Identities = 16/75 (21%), Positives = 28/75 (37%), Gaps = 7/75 (9%)

Query: 55  VTGATGFIGRRLVQRLQADNHQVRVLTR-SRSKAELIFPGKKTRFFPGVMIAEEPQWRDC 113
           VTGA G +G  +   L    H+VR+        AE               +A+     D 
Sbjct: 7   VTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAAEAHE-----EIVAC-DLADAQAVHDL 60

Query: 114 IQGSTAVVNLAGTPI 128
           ++    +++L G  +
Sbjct: 61  VKDCDGIIHLGGVSV 75

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287

 Score = 51.1 bits (123), Expect = 1e-07
 Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 2/44 (4%)

Query: 51 MTVSVTGATGFIGRRLVQRLQA--DNHQVRVLTRSRSKAELIFP 92
           +++VTGATG +G  ++Q L       Q+  + R+  KA  +  
Sbjct: 1  FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLAD 44

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221

 Score = 50.4 bits (120), Expect = 2e-07
 Identities = 21/151 (13%), Positives = 44/151 (29%), Gaps = 20/151 (13%)

Query: 48  ASQMT--VSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIFPGKKTRFFPGVMI 104
           ++ M   +++ GA G I + L   L    +  + +  R            +      V +
Sbjct: 1   SNAMYXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRI----PPEIIDHERVTV 56

Query: 105 AE-----EPQWRDCIQGSTAV-VNLAGTPIGTRWSSEIKKEIKESRIR--VTSKVVDLIN 156
            E            +  +  V V    +         I K +    IR  +   +  L  
Sbjct: 57  IEGSFQNPGXLEQAVTNAEVVFVGAMESGSDMA---SIVKALSRXNIRRVIGVSMAGLSG 113

Query: 157 ESPEGVRPSVLELVKPKYLMRAAHQEMITWL 187
           E P  +     + +   Y+     ++    L
Sbjct: 114 EFPVALEKWTFDNLPISYV--QGERQARNVL 142

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311

 Score = 50.3 bits (121), Expect = 3e-07
 Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 8/75 (10%)

Query: 51  MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMI-AEEPQ 109
           + ++VTG TGF+G+ +V+ ++ D +   +LTRS          K    +   +       
Sbjct: 3   LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIG-------NKAINDYEYRVSDYTLED 55

Query: 110 WRDCIQGSTAVVNLA 124
             + +    AVV+LA
Sbjct: 56  LINQLNDVDAVVHLA 70

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311

 Score = 44.1 bits (105), Expect = 3e-05
 Identities = 15/77 (19%), Positives = 26/77 (33%), Gaps = 7/77 (9%)

Query: 241 KMIPLFM--MFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSNPSYRGVIN-GTAPNPV 294
            MI  F    F G  L    +      +++  D    +  AL      G  N G+  + +
Sbjct: 172 YMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEKVSGTFNIGSG-DAL 230

Query: 295 RLAEMCDHLGNVLGRPS 311
              E+ + + N  G   
Sbjct: 231 TNYEVANTINNAFGNKD 247

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} Length = 322

 Score = 49.9 bits (120), Expect = 5e-07
 Identities = 55/334 (16%), Positives = 111/334 (33%), Gaps = 67/334 (20%)

Query: 52  TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE------LIFPGKKTR--FFPGVM 103
            V VTG TGF+G  +++ L  + + V    R+  + +         PG   +  FF    
Sbjct: 3   RVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNAD- 61

Query: 104 IAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVR 163
           ++    +   I+G   + + A +PI     SE ++ + +  +     ++     S   V+
Sbjct: 62  LSNPDSFAAAIEGCVGIFHTA-SPIDFA-VSEPEEIVTKRTVDGALGILKACVNSK-TVK 118

Query: 164 --------PSVLELVKPKYLMRAAH-------QEMITWLSDYC-AKVYCLVSFNRGVLVC 207
                    +V    K K ++  +        + +  +  +Y  +K              
Sbjct: 119 RFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGWNYAVSKTLA----------- 167

Query: 208 REWEGTALKVNKDVRLALIRI--GIVLGKDGGALAKMIP-----LFMMFAGGPLGSGQQW 260
              E   L+  +   + ++ +    ++   G  +   +P       ++  G     G   
Sbjct: 168 ---EKAVLEFGEQNGIDVVTLILPFIV---GRFVCPKLPDSIEKALVLVLGKKEQIGVTR 221

Query: 261 FSWIHLDDIVNLIYEALSNPSYRGVING---TAPNPVRLAEMCDHLGNVLGRPSWLPVPE 317
           F  +H+DD+       L N        G    +P  V + EM   L            PE
Sbjct: 222 FHMVHVDDVARAHIYLLENSV----PGGRYNCSPFIVPIEEMSQLLSAKY--------PE 269

Query: 318 FALKAVLGEGAFVVLEGQRVVPARAKELGFPFKY 351
           + +  V             +   +  + GF FKY
Sbjct: 270 YQILTVDELKEIKGARLPDLNTKKLVDAGFDFKY 303

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318

 Score = 49.5 bits (118), Expect = 6e-07
 Identities = 15/88 (17%), Positives = 33/88 (37%), Gaps = 8/88 (9%)

Query: 45  TQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMI 104
            +   +  + + G TG+IG  +V+      H   V TR  S    +    ++    G +I
Sbjct: 6   EENGMKSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSL---GAII 62

Query: 105 AE-----EPQWRDCIQGSTAVVNLAGTP 127
            +       +  + ++    V++    P
Sbjct: 63  VKGELDEHEKLVELMKKVDVVISALAFP 90

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346

 Score = 49.3 bits (117), Expect = 9e-07
 Identities = 13/54 (24%), Positives = 21/54 (38%)

Query: 53  VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAE 106
           V + GATGFIG+ +       +    +L R   ++       K     G +I  
Sbjct: 13  VLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVY 66

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* Length = 352

 Score = 48.7 bits (116), Expect = 1e-06
 Identities = 13/36 (36%), Positives = 17/36 (47%)

Query: 52 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA 87
          T++V GATG  G  L++   A  H VR    S    
Sbjct: 7  TIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGL 42

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* Length = 351

 Score = 48.8 bits (117), Expect = 1e-06
 Identities = 19/97 (19%), Positives = 32/97 (32%), Gaps = 13/97 (13%)

Query: 39  FCTSDHTQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRV-----------LTRSRSKA 87
           +         S  T  +TG  GFIG  L+++L   N  V             L   ++  
Sbjct: 14  YEEITQQLIFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLV 73

Query: 88  ELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA 124
                  +  F  G  I +       ++G   V++ A
Sbjct: 74  STE-QWSRFCFIEG-DIRDLTTCEQVMKGVDHVLHQA 108

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} Length = 321

 Score = 47.9 bits (115), Expect = 2e-06
 Identities = 12/36 (33%), Positives = 18/36 (50%)

Query: 45 TQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVL 80
           +   +  + +TG  GFIG  L + L A   +V VL
Sbjct: 2  QRNTLKHRILITGGAGFIGGHLARALVASGEEVTVL 37

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Length = 321

 Score = 48.0 bits (114), Expect = 2e-06
 Identities = 17/88 (19%), Positives = 33/88 (37%), Gaps = 8/88 (9%)

Query: 48  ASQMT-VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFF--PGVMI 104
            S M  + + G TG+IG+ +V+   + +H   +  R  +        +    F   GV I
Sbjct: 1   GSHMEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTI 60

Query: 105 AE-----EPQWRDCIQGSTAVVNLAGTP 127
            E       +    ++    V++    P
Sbjct: 61  IEGEMEEHEKMVSVLKQVDIVISALPFP 88

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* Length = 286

 Score = 47.3 bits (113), Expect = 3e-06
 Identities = 11/40 (27%), Positives = 22/40 (55%), Gaps = 2/40 (5%)

Query: 55 VTGATGFIGRRLVQRLQA--DNHQVRVLTRSRSKAELIFP 92
          +TGATG +G  +++ L       Q+  + R+ +KA+ +  
Sbjct: 4  ITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAA 43

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307

 Score = 46.8 bits (111), Expect = 4e-06
 Identities = 19/89 (21%), Positives = 29/89 (32%), Gaps = 12/89 (13%)

Query: 49  SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFP-----GVM 103
           ++  + + G TG IGR +V       +    L R    A    P  K          GV+
Sbjct: 1   TENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAA--NPETKEELIDNYQSLGVI 58

Query: 104 IAE-----EPQWRDCIQGSTAVVNLAGTP 127
           + E            I+    V+  AG  
Sbjct: 59  LLEGDINDHETLVKAIKQVDIVICAAGRL 87

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333

 Score = 46.9 bits (112), Expect = 5e-06
 Identities = 8/30 (26%), Positives = 13/30 (43%)

Query: 51 MTVSVTGATGFIGRRLVQRLQADNHQVRVL 80
            V +TG  G IG  + + L     +V  +
Sbjct: 22 KKVFITGICGQIGSHIAELLLERGDKVVGI 51

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333

 Score = 41.5 bits (98), Expect = 3e-04
 Identities = 14/81 (17%), Positives = 30/81 (37%), Gaps = 6/81 (7%)

Query: 242 MIPLFM--MFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVIN-GTAPNPVRLAE 298
            +P+F   +  G      +    ++ + D+      A+    + G  +  +    V + E
Sbjct: 198 PLPIFFQRLSEGKKCFVTKARRDFVFVKDLARATVRAVDGVGH-GAYHFSSG-TDVAIKE 255

Query: 299 MCDHLGNVLGRPSWLPVPEFA 319
           + D +   +  PS  P PE  
Sbjct: 256 LYDAVVEAMALPS-YPEPEIR 275

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Length = 330

 Score = 46.4 bits (111), Expect = 6e-06
 Identities = 14/62 (22%), Positives = 27/62 (43%), Gaps = 1/62 (1%)

Query: 41  TSDHTQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTR-SRSKAELIFPGKKTRFF 99
           +S    + S M + +TG  G +G  L++      H++ V+   +  K E++ P       
Sbjct: 11  SSGLVPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVI 70

Query: 100 PG 101
            G
Sbjct: 71  EG 72

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A Length = 299

 Score = 46.2 bits (110), Expect = 7e-06
 Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 1/41 (2%)

Query: 48 ASQMTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKA 87
            +  V V G TG  G  + + L  D   +VRV+TR+  K 
Sbjct: 3  VDKKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKK 43

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A Length = 342

 Score = 46.5 bits (111), Expect = 7e-06
 Identities = 20/79 (25%), Positives = 35/79 (44%), Gaps = 6/79 (7%)

Query: 52  TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE-----LIFPGKKTRFFPGVM-IA 105
            V VTGA GF+   +V++L    ++VR   RS SK                    V  + 
Sbjct: 13  LVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDML 72

Query: 106 EEPQWRDCIQGSTAVVNLA 124
           ++  + + I+G+  V ++A
Sbjct: 73  KQGAYDEVIKGAAGVAHIA 91

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* Length = 337

 Score = 45.3 bits (108), Expect = 1e-05
 Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 8/80 (10%)

Query: 52  TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI-----FPGKKTR--FFPGVMI 104
           TV VTGA+GFIG  LV RL    + VR   R  +  + +      P  +T    +    +
Sbjct: 7   TVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKAD-L 65

Query: 105 AEEPQWRDCIQGSTAVVNLA 124
           A+E  + + I+G T V ++A
Sbjct: 66  ADEGSFDEAIKGCTGVFHVA 85

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* Length = 379

 Score = 45.4 bits (108), Expect = 2e-05
 Identities = 11/32 (34%), Positives = 18/32 (56%)

Query: 49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVL 80
            + +S+TGA GFI   + +RL+ + H V   
Sbjct: 28 ENLKISITGAGGFIASHIARRLKHEGHYVIAS 59

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352

 Score = 45.0 bits (107), Expect = 2e-05
 Identities = 19/89 (21%), Positives = 28/89 (31%), Gaps = 13/89 (14%)

Query: 47  KASQMTVSVTGATGFIGRRLVQRLQADNHQVRV-----------LTRSRSKAELIFPGKK 95
            A      +TG  GFIG  L++ L   + +V             L   RS          
Sbjct: 24  PAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEK-QWSN 82

Query: 96  TRFFPGVMIAEEPQWRDCIQGSTAVVNLA 124
            +F  G  I       +   G   V++ A
Sbjct: 83  FKFIQG-DIRNLDDCNNACAGVDYVLHQA 110

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A Length = 338

 Score = 44.9 bits (107), Expect = 2e-05
 Identities = 19/90 (21%), Positives = 32/90 (35%), Gaps = 8/90 (8%)

Query: 45  TQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI-----FPGKKT-RF 98
                + T  V G TGF+   LV+ L    + V    R     + +            + 
Sbjct: 4   QHPIGKKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKI 63

Query: 99  FPGVMIAEEPQWRDCIQGSTAVVNLAGTPI 128
           F    + +E  +   I G   V ++A TP+
Sbjct: 64  FRAD-LTDELSFEAPIAGCDFVFHVA-TPV 91

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} PDB: 3icp_A* 3aw9_A* Length = 312

 Score = 44.5 bits (106), Expect = 3e-05
 Identities = 13/30 (43%), Positives = 18/30 (60%)

Query: 51 MTVSVTGATGFIGRRLVQRLQADNHQVRVL 80
          M + VTG  GFIG  LV +L    ++V V+
Sbjct: 1  MRIVVTGGAGFIGSHLVDKLVELGYEVVVV 30

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* Length = 311

 Score = 43.7 bits (104), Expect = 5e-05
 Identities = 15/30 (50%), Positives = 18/30 (60%)

Query: 51 MTVSVTGATGFIGRRLVQRLQADNHQVRVL 80
          M V VTG  GFIG  +V+ L A   +V VL
Sbjct: 1  MRVLVTGGAGFIGSHIVEDLLARGLEVAVL 30

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377

 Score = 43.1 bits (102), Expect = 8e-05
 Identities = 16/88 (18%), Positives = 33/88 (37%), Gaps = 5/88 (5%)

Query: 229 GIVLGKDGGALAKMIPLFM--MFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSNPSYR 283
           G   G        + P F+     G PL     G     +I ++D+ N +    ++ +  
Sbjct: 221 GRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRDFIFVEDVANGLIACAADGTPG 280

Query: 284 GVINGTAPNPVRLAEMCDHLGNVLGRPS 311
           GV N  +     +A++   +  + G  +
Sbjct: 281 GVYNIASGKETSIADLATKINEITGNNT 308

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* Length = 212

 Score = 42.1 bits (98), Expect = 9e-05
 Identities = 15/59 (25%), Positives = 26/59 (44%)

Query: 51  MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQ 109
           M V++ G TG +G+ L  RL    H++ V +R   KAE      +       +   + +
Sbjct: 1   MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNE 59

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 43.7 bits (102), Expect = 9e-05
 Identities = 33/219 (15%), Positives = 66/219 (30%), Gaps = 64/219 (29%)

Query: 133 SSEIKKEIKE-SRIRVTSKVVDLINESPE-GVRPSVLELVKPKY--LMRAAHQEMITWLS 188
             EI   I     +  T ++   +    E  V+  V E+++  Y  LM     E      
Sbjct: 48  KEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSM 107

Query: 189 DYCAKVYCL-VSFNRGVL-----VCREWEGTALKVNKDVRLALIRI----GIVLGKDGGA 238
                +      +N   +     V R       +    +R AL+ +     +++  DG  
Sbjct: 108 MTRMYIEQRDRLYNDNQVFAKYNVSRL------QPYLKLRQALLELRPAKNVLI--DG-- 157

Query: 239 LAKMIPLFMMFAGGPLGSGQQW--------------FS----WIHL--DDIVNLIYEALS 278
                    +     LGSG+ W                    W++L   +    + E L 
Sbjct: 158 ---------V-----LGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQ 203

Query: 279 N------PSYRGVINGTAPNPVRLAEMCDHLGNVLGRPS 311
                  P++    + ++   +R+  +   L  +L    
Sbjct: 204 KLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKP 242

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} Length = 362

 Score = 42.3 bits (100), Expect = 1e-04
 Identities = 11/39 (28%), Positives = 18/39 (46%), Gaps = 2/39 (5%)

Query: 44 HTQKASQMTVSVTGATGFIGRRLVQRLQADN--HQVRVL 80
             +    T+ +TG  GF+G  L    Q ++   +V VL
Sbjct: 4  IDDELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVL 42

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342

 Score = 42.0 bits (99), Expect = 2e-04
 Identities = 11/37 (29%), Positives = 19/37 (51%), Gaps = 7/37 (18%)

Query: 51 MTVSVTGATGFIGRRLVQRLQAD-------NHQVRVL 80
          M +++ GA G +GR+L QRL  D         +  ++
Sbjct: 15 MHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLI 51

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 Length = 660

 Score = 41.9 bits (99), Expect = 2e-04
 Identities = 19/94 (20%), Positives = 31/94 (32%), Gaps = 3/94 (3%)

Query: 38  VFCTSDHTQKASQMTVSVTGATGFIGRRLVQR-LQADNHQVRVLTRSRSKAELIFPGKKT 96
              +        +  V + G  GFIG  L +R L+ D+++V  L                
Sbjct: 303 RLNSQPACTARRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHF 362

Query: 97  RFFPGVMIAEEPQWRDCIQGSTAVVNLAG--TPI 128
            F  G +          ++    V+ L    TPI
Sbjct: 363 HFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPI 396

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} Length = 313

 Score = 40.6 bits (96), Expect = 5e-04
 Identities = 10/30 (33%), Positives = 20/30 (66%), Gaps = 1/30 (3%)

Query: 51 MTVSVTGATGFIGRRLVQRLQADNHQVRVL 80
            + VTG  GFIG  +V +L ++++++ V+
Sbjct: 2  SLIVVTGGAGFIGSHVVDKL-SESNEIVVI 30

>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus} Length = 201

 Score = 39.6 bits (92), Expect = 5e-04
 Identities = 11/46 (23%), Positives = 20/46 (43%), Gaps = 1/46 (2%)

Query: 48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG 93
            Q  V + G TG  G+ L  ++    + V   +R+   + L+  G
Sbjct: 17 EKQGVVCIFG-TGDFGKSLGLKMLQCGYSVVFGSRNPQVSSLLPRG 61

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317

 Score = 40.0 bits (94), Expect = 8e-04
 Identities = 10/26 (38%), Positives = 14/26 (53%)

Query: 55 VTGATGFIGRRLVQRLQADNHQVRVL 80
          VTG++G IG  LV  L     +  V+
Sbjct: 4  VTGSSGQIGTELVPYLAEKYGKKNVI 29

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	363
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	100.0
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	100.0
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	100.0
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	100.0
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	100.0
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	100.0
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	100.0
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	100.0
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	100.0
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	100.0
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	100.0
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	100.0
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	100.0
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	100.0
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	100.0
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	100.0
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	100.0
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	100.0
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	100.0
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	100.0
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	100.0
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	100.0
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	100.0
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	100.0
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	100.0
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	100.0
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	100.0
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	100.0
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	100.0
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	100.0
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	100.0
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	100.0
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	100.0
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	100.0
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	100.0
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	100.0
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	100.0
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	100.0
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	100.0
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	100.0
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	100.0
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	100.0
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	100.0
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	100.0
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	100.0
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	100.0
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	100.0
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	100.0
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	100.0
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	100.0
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	100.0
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	100.0
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	100.0
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	100.0
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	100.0
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	100.0
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	100.0
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	100.0
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	100.0
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.98
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.98
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.98
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.97
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.97
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.97
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.97
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.97
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.97
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.96
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.96
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.96
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.96
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.96
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.96
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.96
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.96
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.95
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.95
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.94
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.93
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.92
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.92
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.92
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.92
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.91
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.91
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.91
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.9
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.9
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.9
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.9
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.89
1spx_A	278	Short-chain reductase family member (5L265); paral	99.89
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.89
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.89
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.89
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.88
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.88
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.88
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.88
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.88
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.87
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.87
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.87
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.87
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.87
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.87
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.87
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.87
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.86
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.86
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.86
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.86
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.86
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.86
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.86
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.86
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.86
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.86
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.86
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.86
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.86
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.86
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.85
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.85
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.85
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.85
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.85
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.85
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.85
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.85
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.85
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.85
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.85
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.85
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.85
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.85
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.85
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.85
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.85
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.85
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.85
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.85
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.85
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.85
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.85
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.85
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.85
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.85
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.85
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.85
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.85
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.85
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.85
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.85
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.85
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.85
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.85
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.85
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.85
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.85
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.84
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.84
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.84
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.84
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.84
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.84
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.84
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.84
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.84
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.84
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.84
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.84
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.84
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.84
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.84
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.84
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.84
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.84
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.84
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.84
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.84
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.84
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	99.84
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.84
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.84
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.84
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.84
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.84
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.84
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.84
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.84
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.84
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.84
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.84
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.83
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.83
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.83
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.83
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.83
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.83
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.83
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.83
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.83
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.83
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.83
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.83
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.83
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.83
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.83
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.83
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.83
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.83
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.83
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.83
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.83
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.83
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.83
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.82
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.82
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.82
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.82
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.82
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.82
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.82
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.82
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.82
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.82
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.82
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.82
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.82
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.82
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.82
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.82
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.82
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.82
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.82
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.82
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.82
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.82
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.82
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.82
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.81
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.81
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.81
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.81
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.81
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.81
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.81
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.81
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.81
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.81
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.81
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.81
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.81
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.8
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.8
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.8
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	99.8
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.8
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.8
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.8
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	99.8
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.8
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.8
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.8
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.8
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.79
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.79
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	99.79
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.79
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.79
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.78
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.78
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	99.78
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	99.78
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.77
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.77
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.77
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.77
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.76
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	99.76
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.76
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.76
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.76
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.76
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.75
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.75
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.74
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.74
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.73
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.73
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.72
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.71
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.7
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.7
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.7
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.69
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.66
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.63
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.62
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.6
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.6
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.59
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.5
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.45
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.34
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	99.32
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.3
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.29
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	99.26
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.26
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.2
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	99.18
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	99.12
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	99.06
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	99.05
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	99.01
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	98.93
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	98.79
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.71
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.67
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	98.66
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	98.61
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	98.55
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.52
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.51
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	98.51
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	98.49
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.48
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.43
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	98.34
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	98.34
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.27
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	98.17
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	98.15
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.09
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	98.09
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.08
2nqt_A	352	N-acetyl-gamma-glutamyl-phosphate reductase; apopr	98.08
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	98.06
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	98.06
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	98.02
2ozp_A	345	N-acetyl-gamma-glutamyl-phosphate reductase; amino	98.02
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	98.0
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	98.0
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	97.99
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	97.97
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.97
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.96
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	97.96
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.93
3tl2_A	315	Malate dehydrogenase; center for structural genomi	97.92
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	97.9
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.9
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	97.88
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	97.88
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	97.85
2hjs_A	340	USG-1 protein homolog; aspartate-semialdehyde dehy	97.85
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	97.83
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	97.81
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	97.8
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	97.77
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	97.77
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	97.76
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.76
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	97.76
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	97.73
3ijp_A	288	DHPR, dihydrodipicolinate reductase; ssgcid, SBRI,	97.73
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	97.72
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	97.72
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	97.7
1xyg_A	359	Putative N-acetyl-gamma-glutamyl-phosphate reduct;	97.68
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	97.67
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	97.67
1lld_A	319	L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N	97.66
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	97.65
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	97.65
3pwk_A	366	Aspartate-semialdehyde dehydrogenase; NADP binding	97.65
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	97.65
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	97.63
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	97.61
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	97.61
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	97.61
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	97.59
3dr3_A	337	N-acetyl-gamma-glutamyl-phosphate reductase; csgid	97.58
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	97.57
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	97.57
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	97.57
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	97.56
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	97.55
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.54
2r00_A	336	Aspartate-semialdehyde dehydrogenase; conformation	97.54
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	97.54
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.51
4a7p_A	446	UDP-glucose dehydrogenase; oxidoreductase, carbohy	97.51
3qha_A	296	Putative oxidoreductase; seattle structural genomi	97.5
1mv8_A	436	GMD, GDP-mannose 6-dehydrogenase; rossman fold, do	97.46
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	97.44
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	97.44
7mdh_A	375	Protein (malate dehydrogenase); chloroplastic mala	97.43
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	97.42
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	97.41
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	97.41
2y0c_A	478	BCEC, UDP-glucose dehydrogenase; oxidoreductase, c	97.41
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.4
4huj_A	220	Uncharacterized protein; PSI-biology, nysgrc, stru	97.39
3vtf_A	444	UDP-glucose 6-dehydrogenase; two discrete alpha/be	97.39
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	97.36
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	97.36
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.36
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	97.35
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	97.34
3pid_A	432	UDP-glucose 6-dehydrogenase; rossmann fold, oxidor	97.34
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	97.33
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	97.33
1y81_A	138	Conserved hypothetical protein; hyperthermophIle,	97.33
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	97.32
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.32
1ys4_A	354	Aspartate-semialdehyde dehydrogenase; oxidoreducta	97.32
3g79_A	478	NDP-N-acetyl-D-galactosaminuronic acid dehydrogen;	97.31
1hyh_A	309	L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2	97.31
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	97.29
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	97.29
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.29
3qy9_A	243	DHPR, dihydrodipicolinate reductase; rossmann fold	97.28
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	97.26
3tz6_A	344	Aspartate-semialdehyde dehydrogenase; asadh, ASD,	97.26
2i6t_A	303	Ubiquitin-conjugating enzyme E2-like isoform A; L-	97.26
4g65_A	461	TRK system potassium uptake protein TRKA; structur	97.25
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.25
2ep5_A	350	350AA long hypothetical aspartate-semialdehyde deh	97.24
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.24
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	97.23
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	97.23
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	97.23
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	97.22
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	97.21
2dpo_A	319	L-gulonate 3-dehydrogenase; structural genomics, N	97.2
4dpk_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	97.2
4dpl_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	97.2
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.2
3uw3_A	377	Aspartate-semialdehyde dehydrogenase; structural g	97.19
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.19
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	97.17
2o3j_A	481	UDP-glucose 6-dehydrogenase; structural genomics,	97.17
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	97.17
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	97.16
1t4b_A	367	Aspartate-semialdehyde dehydrogenase; asadh, HOSR,	97.16
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	97.15
3pzr_A	370	Aspartate-semialdehyde dehydrogenase; NADP, oxidor	97.15
2ahr_A	259	Putative pyrroline carboxylate reductase; pyrrolin	97.13
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	97.12
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	97.12
2d4a_B	308	Malate dehydrogenase; archaea, hyperthermophIle, o	97.12
4gbj_A	297	6-phosphogluconate dehydrogenase NAD-binding; stru	97.11
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	97.1
3k96_A	356	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA	97.1
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	97.09
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	97.08
3dtt_A	245	NADP oxidoreductase; structural genomics, joint ce	97.07
2q3e_A	467	UDP-glucose 6-dehydrogenase; hexamer, structural g	97.06
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.06
3qsg_A	312	NAD-binding phosphogluconate dehydrogenase-like P;	97.06
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	97.04
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	97.04
3hsk_A	381	Aspartate-semialdehyde dehydrogenase; candida albi	97.03
1yb4_A	295	Tartronic semialdehyde reductase; structural genom	97.03
3cky_A	301	2-hydroxymethyl glutarate dehydrogenase; rossmann	97.02
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	97.02
2cvz_A	289	Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase;	97.01
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	97.01
1bg6_A	359	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L	96.99
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	96.99
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	96.98
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	96.98
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	96.97
1ks9_A	291	KPA reductase;, 2-dehydropantoate 2-reductase; PAN	96.96
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	96.96
4gwg_A	484	6-phosphogluconate dehydrogenase, decarboxylating;	96.96
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.95
2uyy_A	316	N-PAC protein; long-chain dehydrogenase, cytokine;	96.95
3obb_A	300	Probable 3-hydroxyisobutyrate dehydrogenase; struc	96.94
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	96.94
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	96.93
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	96.88
2f1k_A	279	Prephenate dehydrogenase; tyrosine synthesis, X-RA	96.88
1txg_A	335	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxid	96.87
3ado_A	319	Lambda-crystallin; L-gulonate 3-dehydrogenase, str	96.87
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	96.87
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	96.86
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	96.84
4e4t_A	419	Phosphoribosylaminoimidazole carboxylase, ATPase;	96.84
2d59_A	144	Hypothetical protein PH1109; COA binding, structur	96.83
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	96.81
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	96.81
3gt0_A	247	Pyrroline-5-carboxylate reductase; structural geno	96.81
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	96.8
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	96.77
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	96.76

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=100.00  E-value=1.3e-45  Score=328.42  Aligned_cols=285  Identities=34%  Similarity=0.583  Sum_probs=229.8

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCCCCC-
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIG-  129 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~~~~-  129 (363)
                      |||||||||||||++|+++|+++||+|++++|++.+.               ++...+...+.++++|+|||+|+.... 
T Consensus         1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~---------------~~~~~~~~~~~l~~~d~vihla~~~i~~   65 (298)
T 4b4o_A            1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPG---------------RITWDELAASGLPSCDAAVNLAGENILN   65 (298)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT---------------EEEHHHHHHHCCCSCSEEEECCCCCSSC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcC---------------eeecchhhHhhccCCCEEEEeccCcccc
Confidence            7999999999999999999999999999999976432               111112234567899999999986433 


Q ss_pred             --CCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC---CcccccccCCCcc-hhhhhhhcccchhh
Q 017977          130 --TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM---RAAHQEMITWLSD-YCAKVYCLVSFNRG  203 (363)
Q Consensus       130 --~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg---~~~~~e~~~~~~~-~~~~~~~~~~y~~~  203 (363)
                        ..+.......+++.|+.++.+|++++.......+.+|+.||. ++||   ..+.+|+++..+. +...          
T Consensus        66 ~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~-~vyg~~~~~~~~E~~p~~~~~~~~~----------  134 (298)
T 4b4o_A           66 PLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGV-AYYQPSLTAEYDEDSPGGDFDFFSN----------  134 (298)
T ss_dssp             TTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEG-GGSCCCSSCCBCTTCCCSCSSHHHH----------
T ss_pred             hhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeee-eeecCCCCCcccccCCccccchhHH----------
Confidence              245677778899999999999999999832233336666777 8999   5678888775543 3333          


Q ss_pred             HHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHHHHHhcCCCCC
Q 017977          204 VLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYR  283 (363)
Q Consensus       204 k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~  283 (363)
                        .+..++.+......+++++++||+.||||+++....+........+..++++++.++|||++|+|+++..+++++...
T Consensus       135 --~~~~~e~~~~~~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~ihv~Dva~a~~~~~~~~~~~  212 (298)
T 4b4o_A          135 --LVTKWEAAARLPGDSTRQVVVRSGVVLGRGGGAMGHMLLPFRLGLGGPIGSGHQFFPWIHIGDLAGILTHALEANHVH  212 (298)
T ss_dssp             --HHHHHHHHHCCSSSSSEEEEEEECEEECTTSHHHHHHHHHHHTTCCCCBTTSCSBCCEEEHHHHHHHHHHHHHCTTCC
T ss_pred             --HHHHHHHHHHhhccCCceeeeeeeeEEcCCCCchhHHHHHHhcCCcceecccCceeecCcHHHHHHHHHHHHhCCCCC
Confidence              455666665555568999999999999998766555554445455556689999999999999999999999998888


Q ss_pred             ceEEeeCCCCcCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhccC-ceeeecCcccChhhHHHcCCCcccccHHHHHHHHh
Q 017977          284 GVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEG-AFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIM  362 (363)
Q Consensus       284 g~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~k~~~lG~~p~~~~~~~~l~~~~  362 (363)
                      |+||+++++++|++|+++.+++.+|++..+++|.|..+..++++ ...++.+++++++|++++||+|+|++++++|++++
T Consensus       213 g~yn~~~~~~~t~~e~~~~ia~~lgrp~~~pvP~~~~~~~~g~~~~~~~l~~~rv~~~kl~~~Gf~f~yp~l~~al~~l~  292 (298)
T 4b4o_A          213 GVLNGVAPSSATNAEFAQTFGAALGRRAFIPLPSAVVQAVFGRQRAIMLLEGQKVIPRRTLATGYQYSFPELGAALKEIA  292 (298)
T ss_dssp             EEEEESCSCCCBHHHHHHHHHHHHTCCCCCCBCHHHHHHHHCHHHHHHHHCCCCBCCHHHHHTTCCCSCCSHHHHHHHHH
T ss_pred             CeEEEECCCccCHHHHHHHHHHHhCcCCcccCCHHHHHHHhcchhHHHhhCCCEEcHHHHHHCCCCCCCCCHHHHHHHHH
Confidence            89999999999999999999999999988999999999888744 44566788999999999999999999999999987


Q ss_pred             C
Q 017977          363 S  363 (363)
Q Consensus       363 ~  363 (363)
                      +
T Consensus       293 ~  293 (298)
T 4b4o_A          293 E  293 (298)
T ss_dssp             H
T ss_pred             H
Confidence            4

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=100.00  E-value=6.9e-41  Score=319.04  Aligned_cols=287  Identities=31%  Similarity=0.532  Sum_probs=204.5

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCCCCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIG  129 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~~~~  129 (363)
                      +|+|||||||||||++|++.|+++|++|++++|+..+...          ...|+.+  .+.++++++|+|||+|+....
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~~----------v~~d~~~--~~~~~l~~~D~Vih~A~~~~~  214 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPGK----------RFWDPLN--PASDLLDGADVLVHLAGEPIF  214 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTTC----------EECCTTS--CCTTTTTTCSEEEECCCC---
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCccc----------eeecccc--hhHHhcCCCCEEEECCCCccc
Confidence            6899999999999999999999999999999998765321          2244443  356677899999999997544


Q ss_pred             CCCChhhHHHHHHHHHHHHHHHHHH-HHhCCCCCCCeEEEeccceecC----CcccccccCCCcchhhhhhhcccchhhH
Q 017977          130 TRWSSEIKKEIKESRIRVTSKVVDL-INESPEGVRPSVLELVKPKYLM----RAAHQEMITWLSDYCAKVYCLVSFNRGV  204 (363)
Q Consensus       130 ~~~~~~~~~~~~~~n~~~~~~l~~~-~~~~~~~~~~~v~~SS~~~~yg----~~~~~e~~~~~~~~~~~~~~~~~y~~~k  204 (363)
                      ..+.......++++|+.++.+++++ +..  .+++++||+||. ++||    ..+++|+.+....+...           
T Consensus       215 ~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~--~~~~r~V~~SS~-~vyg~~~~~~~~~E~~~~~~~~y~~-----------  280 (516)
T 3oh8_A          215 GRFNDSHKEAIRESRVLPTKFLAELVAES--TQCTTMISASAV-GFYGHDRGDEILTEESESGDDFLAE-----------  280 (516)
T ss_dssp             --CCGGGHHHHHHHTHHHHHHHHHHHHHC--SSCCEEEEEEEG-GGGCSEEEEEEECTTSCCCSSHHHH-----------
T ss_pred             cccchhHHHHHHHHHHHHHHHHHHHHHhc--CCCCEEEEeCcc-eEecCCCCCCccCCCCCCCcChHHH-----------
Confidence            4566777889999999999999999 555  678899999999 8898    35678877653332222           


Q ss_pred             HHHHHHHHHHh-ccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHHHHHhcCCCCC
Q 017977          205 LVCREWEGTAL-KVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYR  283 (363)
Q Consensus       205 ~~~~~~~~~~~-~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~  283 (363)
                       .+.+++.... ....|++++++||+++||+..+....+...+.......++++++.+++||++|+|++++.+++++...
T Consensus       281 -~~~~~E~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~g~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~  359 (516)
T 3oh8_A          281 -VCRDWEHATAPASDAGKRVAFIRTGVALSGRGGMLPLLKTLFSTGLGGKFGDGTSWFSWIAIDDLTDIYYRAIVDAQIS  359 (516)
T ss_dssp             -HHHHHHHTTHHHHHTTCEEEEEEECEEEBTTBSHHHHHHHTTC---CCCCTTSCCEECEEEHHHHHHHHHHHHHCTTCC
T ss_pred             -HHHHHHHHHHHHHhCCCCEEEEEeeEEECCCCChHHHHHHHHHhCCCcccCCCCceEceEeHHHHHHHHHHHHhCcccC
Confidence             2233332221 12248999999999999998543332222222222334578889999999999999999999988777


Q ss_pred             ceEEeeCCCCcCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhccC--ceeeecCcccChhhHHHcCCCcccccHHHHHHHH
Q 017977          284 GVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEG--AFVVLEGQRVVPARAKELGFPFKYRYVKDALKAI  361 (363)
Q Consensus       284 g~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~k~~~lG~~p~~~~~~~~l~~~  361 (363)
                      |+||+++++++++.|+++.+.+.+|++..+++|.+..+..+++.  ......+.+++++|+++|||+|++++++++|+++
T Consensus       360 g~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~kl~~lG~~~~~~~l~e~l~~~  439 (516)
T 3oh8_A          360 GPINAVAPNPVSNADMTKILATSMHRPAFIQIPSLGPKILLGSQGAEELALASQRTAPAALENLSHTFRYTDIGAAIAHE  439 (516)
T ss_dssp             EEEEESCSCCEEHHHHHHHTTC---------------------CCGGGGGGCEEEECCHHHHHTTCCCSCSSHHHHHHHH
T ss_pred             CcEEEECCCCCCHHHHHHHHHHHhCCCCCCCCCHHHHHHHhCCchhHHHhhcCCeechHHHHHCCCCCCCCCHHHHHHHH
Confidence            89999999999999999999999999877788888777766766  5556667888899999999999998899999998


Q ss_pred             hC
Q 017977          362 MS  363 (363)
Q Consensus       362 ~~  363 (363)
                      ++
T Consensus       440 l~  441 (516)
T 3oh8_A          440 LG  441 (516)
T ss_dssp             HT
T ss_pred             hC
Confidence            74

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=100.00  E-value=2.5e-40  Score=296.10  Aligned_cols=280  Identities=20%  Similarity=0.214  Sum_probs=214.1

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCCCCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIG  129 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~~~~  129 (363)
                      +|+|||||||||||++|+++|+++|++|++++|++.... +.    ......+|+. .+++.++++++|+|||+|+....
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~----~~~~~~~Dl~-~~~~~~~~~~~d~Vih~a~~~~~   75 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-IN----DYEYRVSDYT-LEDLINQLNDVDAVVHLAATRGS   75 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC----------CCEEEECCCC-HHHHHHHTTTCSEEEECCCCCCS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-CC----ceEEEEcccc-HHHHHHhhcCCCEEEEccccCCC
Confidence            479999999999999999999999999999999943333 22    1225568998 99999999999999999997433


Q ss_pred             CCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC---CcccccccCCCcchhhhhhhcccchhhHHH
Q 017977          130 TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM---RAAHQEMITWLSDYCAKVYCLVSFNRGVLV  206 (363)
Q Consensus       130 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg---~~~~~e~~~~~~~~~~~~~~~~~y~~~k~~  206 (363)
                      .     ++...+++|+.++.++++++.+  .+++++||+||. ++||   ..+++|+.+..+.        ..|+.+|+.
T Consensus        76 ~-----~~~~~~~~n~~~~~~ll~a~~~--~~~~r~v~~SS~-~vyg~~~~~~~~E~~~~~p~--------~~Y~~sK~~  139 (311)
T 3m2p_A           76 Q-----GKISEFHDNEILTQNLYDACYE--NNISNIVYASTI-SAYSDETSLPWNEKELPLPD--------LMYGVSKLA  139 (311)
T ss_dssp             S-----SCGGGTHHHHHHHHHHHHHHHH--TTCCEEEEEEEG-GGCCCGGGCSBCTTSCCCCS--------SHHHHHHHH
T ss_pred             C-----ChHHHHHHHHHHHHHHHHHHHH--cCCCEEEEEccH-HHhCCCCCCCCCCCCCCCCC--------chhHHHHHH
Confidence            2     3456788999999999999999  789999999998 8998   4677887764331        225555655


Q ss_pred             HHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHH--HHHhCCCC---CCCCCccccccHHHHHHHHHHHhcCCC
Q 017977          207 CREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSNPS  281 (363)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~D~a~a~~~~~~~~~  281 (363)
                      .+......... .+++++++||+.+||+..... .+++.+  ....+.++   +++++.++++|++|+|++++.+++++.
T Consensus       140 ~E~~~~~~~~~-~g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~  217 (311)
T 3m2p_A          140 CEHIGNIYSRK-KGLCIKNLRFAHLYGFNEKNN-YMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEK  217 (311)
T ss_dssp             HHHHHHHHHHH-SCCEEEEEEECEEECSCC--C-CHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTTCTT
T ss_pred             HHHHHHHHHHH-cCCCEEEEeeCceeCcCCCCC-CHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHHhcCC
Confidence            55554444433 499999999999999976532 233322  33445553   678889999999999999999998876


Q ss_pred             CCceEEeeCCCCcCHHHHHHHHHHHhCCCCCC-CCcHHHHHHHhccCceeeecCcccChhhHHH-cCCCcccccHHHHHH
Q 017977          282 YRGVINGTAPNPVRLAEMCDHLGNVLGRPSWL-PVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYRYVKDALK  359 (363)
Q Consensus       282 ~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lG~~p~~~~~~~~l~  359 (363)
                      .+++||+++++++++.|+++.+.+.+|.+..+ ..|.+         .........++++|+++ |||+|+++ ++++|+
T Consensus       218 ~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~---------~~~~~~~~~~d~~k~~~~lG~~p~~~-~~~~l~  287 (311)
T 3m2p_A          218 VSGTFNIGSGDALTNYEVANTINNAFGNKDNLLVKNPN---------ANEGIHSSYMDSSKAKELLDFSTDYN-FATAVE  287 (311)
T ss_dssp             CCEEEEECCSCEECHHHHHHHHHHHTTCTTCEEECSSS---------BCCSCCCBCBCCHHHHHHSCCCCSCC-HHHHHH
T ss_pred             CCCeEEeCCCCcccHHHHHHHHHHHhCCCCcceecCCC---------CCCCcCceecCHHHHHHHhCCCcccC-HHHHHH
Confidence            67799999999999999999999999987322 11110         11122456678999976 99999996 999999


Q ss_pred             HHhC
Q 017977          360 AIMS  363 (363)
Q Consensus       360 ~~~~  363 (363)
                      ++++
T Consensus       288 ~~~~  291 (311)
T 3m2p_A          288 EIHL  291 (311)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9863

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=100.00  E-value=2.4e-40  Score=296.51  Aligned_cols=288  Identities=18%  Similarity=0.254  Sum_probs=207.5

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCCCCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIG  129 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~~~~  129 (363)
                      ||+|||||||||||++|+++|+++|+.|.+..|+..........   .....+|+.+ +++.++++++|+|||+|+.. .
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~---~~~~~~Dl~~-~~~~~~~~~~d~vih~a~~~-~   75 (313)
T 3ehe_A            1 MSLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEFVNEA---ARLVKADLAA-DDIKDYLKGAEEVWHIAANP-D   75 (313)
T ss_dssp             --CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGGSCTT---EEEECCCTTT-SCCHHHHTTCSEEEECCCCC-C
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChhhcCCC---cEEEECcCCh-HHHHHHhcCCCEEEECCCCC-C
Confidence            57899999999999999999999995444444443333222111   2245689988 88999999999999999964 2


Q ss_pred             CCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC---CcccccccCCCcchhhhhhhcccchhhHHH
Q 017977          130 TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM---RAAHQEMITWLSDYCAKVYCLVSFNRGVLV  206 (363)
Q Consensus       130 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg---~~~~~e~~~~~~~~~~~~~~~~~y~~~k~~  206 (363)
                      .......++..+++|+.++.++++++.+  .+++++||+||. ++||   ..+++|+.+..+.        ..|+.+|+.
T Consensus        76 ~~~~~~~~~~~~~~nv~~~~~l~~~~~~--~~~~~iv~~SS~-~vyg~~~~~~~~E~~~~~~~--------~~Y~~sK~~  144 (313)
T 3ehe_A           76 VRIGAENPDEIYRNNVLATYRLLEAMRK--AGVSRIVFTSTS-TVYGEAKVIPTPEDYPTHPI--------SLYGASKLA  144 (313)
T ss_dssp             CC-CCCCHHHHHHHHHHHHHHHHHHHHH--HTCCEEEEECCG-GGGCSCSSSSBCTTSCCCCC--------SHHHHHHHH
T ss_pred             hhhhhhCHHHHHHHHHHHHHHHHHHHHH--cCCCeEEEeCch-HHhCcCCCCCCCCCCCCCCC--------CHHHHHHHH
Confidence            3445566789999999999999999998  788899999999 8998   4567776653221        124445544


Q ss_pred             HHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHH-H-HHHhC-CC---CCCCCCccccccHHHHHHHHHHHhcCC
Q 017977          207 CREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPL-F-MMFAG-GP---LGSGQQWFSWIHLDDIVNLIYEALSNP  280 (363)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~-~-~~~~~-~~---~~~~~~~~~~i~v~D~a~a~~~~~~~~  280 (363)
                      .+......... .|++++++||+++|||....  .++.. + ....+ .+   ++++.+.++++|++|+|++++.+++..
T Consensus       145 ~e~~~~~~~~~-~g~~~~ilRp~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~  221 (313)
T 3ehe_A          145 CEALIESYCHT-FDMQAWIYRFANVIGRRSTH--GVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLRGD  221 (313)
T ss_dssp             HHHHHHHHHHH-TTCEEEEEECSCEESTTCCC--SHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHh-cCCCEEEEeeccccCcCCCc--ChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhccC
Confidence            44444443333 49999999999999997643  22222 2 23333 22   378889999999999999999999855


Q ss_pred             CCCceEEeeCCCCcCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhccCceeeecCcccChhhHHHcCCCcccccHHHHHHH
Q 017977          281 SYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKA  360 (363)
Q Consensus       281 ~~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~p~~~~~~~~l~~  360 (363)
                      ..+++||+++++++++.|+++.+.+.+|.+..+..+.... ...++     .....++++|+++|||+|+++ ++|+|++
T Consensus       222 ~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~-~~~~~-----~~~~~~d~~k~~~lG~~p~~~-~~e~l~~  294 (313)
T 3ehe_A          222 ERVNIFNIGSEDQIKVKRIAEIVCEELGLSPRFRFTGGDR-GWKGD-----VPVMLLSIEKLKRLGWKPRYN-SEEAVRM  294 (313)
T ss_dssp             SSEEEEECCCSCCEEHHHHHHHHHHHTTCCCEEEEC------------------CCBCCHHHHHHTCCCSCC-HHHHHHH
T ss_pred             CCCceEEECCCCCeeHHHHHHHHHHHhCCCCceEECCCcc-CCccc-----cceeccCHHHHHHcCCCCCCC-HHHHHHH
Confidence            5667999999999999999999999999874433222100 00111     123557899998899999997 9999999


Q ss_pred             HhC
Q 017977          361 IMS  363 (363)
Q Consensus       361 ~~~  363 (363)
                      +++
T Consensus       295 ~~~  297 (313)
T 3ehe_A          295 AVR  297 (313)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            863

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=100.00  E-value=7.7e-41  Score=304.49  Aligned_cols=297  Identities=15%  Similarity=0.113  Sum_probs=218.8

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCC----CC-----CccccCcccccCcchHHhhccCCCE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GK-----KTRFFPGVMIAEEPQWRDCIQGSTA  119 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~-----~~~~~~~~d~~~~~~~~~~~~~~d~  119 (363)
                      ++|+|||||||||||++|+++|+++|++|++++|+.........    ..     ....+..+|+.|.+++.++++++|+
T Consensus        24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~  103 (351)
T 3ruf_A           24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGVDH  103 (351)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTCSE
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCCCE
Confidence            45799999999999999999999999999999998754322110    00     1112456899999999999999999


Q ss_pred             EEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC---CcccccccCCCcchhhhhhh
Q 017977          120 VVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM---RAAHQEMITWLSDYCAKVYC  196 (363)
Q Consensus       120 Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg---~~~~~e~~~~~~~~~~~~~~  196 (363)
                      |||+|+.. .......++...+++|+.++.+++++|.+  .++++|||+||. ++||   ..+++|+.+..+.       
T Consensus       104 Vih~A~~~-~~~~~~~~~~~~~~~nv~~~~~ll~a~~~--~~~~~~v~~SS~-~vyg~~~~~~~~E~~~~~p~-------  172 (351)
T 3ruf_A          104 VLHQAALG-SVPRSIVDPITTNATNITGFLNILHAAKN--AQVQSFTYAASS-STYGDHPALPKVEENIGNPL-------  172 (351)
T ss_dssp             EEECCCCC-CHHHHHHCHHHHHHHHTHHHHHHHHHHHH--TTCSEEEEEEEG-GGGTTCCCSSBCTTCCCCCC-------
T ss_pred             EEECCccC-CcchhhhCHHHHHHHHHHHHHHHHHHHHH--cCCCEEEEEecH-HhcCCCCCCCCccCCCCCCC-------
Confidence            99999963 22233445677899999999999999999  789999999999 8998   4577887764321       


Q ss_pred             cccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc---cchHHHH--HHHhCCCC---CCCCCccccccHHH
Q 017977          197 LVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL---AKMIPLF--MMFAGGPL---GSGQQWFSWIHLDD  268 (363)
Q Consensus       197 ~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~---~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~D  268 (363)
                       ..|+.+|+..+......... .|++++++||+++||+.....   ..+++.+  ....+.++   +++++.++++|++|
T Consensus       173 -~~Y~~sK~~~E~~~~~~~~~-~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~D  250 (351)
T 3ruf_A          173 -SPYAVTKYVNEIYAQVYART-YGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDN  250 (351)
T ss_dssp             -SHHHHHHHHHHHHHHHHHHH-HCCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHH
T ss_pred             -ChhHHHHHHHHHHHHHHHHH-hCCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHH
Confidence             22455565445444433333 389999999999999975332   2334333  44556554   77889999999999


Q ss_pred             HHHHHHHHhcCC-C-CCceEEeeCCCCcCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhccCceeeecCcccChhhHHH-c
Q 017977          269 IVNLIYEALSNP-S-YRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-L  345 (363)
Q Consensus       269 ~a~a~~~~~~~~-~-~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-l  345 (363)
                      +|++++.++.+. . .+++||+++++++++.|+++.+.+.+|.+.......    ...............++++|+++ |
T Consensus       251 va~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~----~~~~~~~~~~~~~~~~d~~k~~~~l  326 (351)
T 3ruf_A          251 VIQMNILSALAKDSAKDNIYNVAVGDRTTLNELSGYIYDELNLIHHIDKLS----IKYREFRSGDVRHSQADVTKAIDLL  326 (351)
T ss_dssp             HHHHHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHTTCCC---------EEECCCTTCCSBCCBCCHHHHHHH
T ss_pred             HHHHHHHHHhhccccCCCEEEeCCCCcccHHHHHHHHHHHhCccccccccc----ccccCCCCCccceeeeCHHHHHHHh
Confidence            999999999873 2 556999999999999999999999999853221100    00111111112345678999975 9


Q ss_pred             CCCcccccHHHHHHHHhC
Q 017977          346 GFPFKYRYVKDALKAIMS  363 (363)
Q Consensus       346 G~~p~~~~~~~~l~~~~~  363 (363)
                      ||+|+++ ++++|+++++
T Consensus       327 G~~p~~~-~~~~l~~~~~  343 (351)
T 3ruf_A          327 KYRPNIK-IREGLRLSMP  343 (351)
T ss_dssp             CCCCCCC-HHHHHHHHHH
T ss_pred             CCCCCCC-HHHHHHHHHH
Confidence            9999997 9999999863

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=100.00  E-value=6.7e-40  Score=297.69  Aligned_cols=294  Identities=16%  Similarity=0.174  Sum_probs=212.6

Q ss_pred             CCCCccEEEEecCcchHHHHHHHHHHhCC--CEEEEEeCCCCcc--cccCCC--CCccccCcccccCcchHHhhccC--C
Q 017977           46 QKASQMTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKA--ELIFPG--KKTRFFPGVMIAEEPQWRDCIQG--S  117 (363)
Q Consensus        46 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~--~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~--~  117 (363)
                      ...++|+|||||||||||++|+++|+++|  ++|++++|.....  ..+...  .....+..+|+.|.+++.+++++  +
T Consensus        20 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   99 (346)
T 4egb_A           20 FQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKERDV   99 (346)
T ss_dssp             ----CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHTC
T ss_pred             cccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhcCC
Confidence            33556899999999999999999999999  7888888865322  111111  11222456899999999999987  9


Q ss_pred             CEEEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC----CcccccccCCCcchhhh
Q 017977          118 TAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM----RAAHQEMITWLSDYCAK  193 (363)
Q Consensus       118 d~Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg----~~~~~e~~~~~~~~~~~  193 (363)
                      |+|||+|+.... ......+..++++|+.++.+++++|.+  .+++++||+||. ++||    ..+++|+.+..+.    
T Consensus       100 d~Vih~A~~~~~-~~~~~~~~~~~~~nv~~~~~ll~a~~~--~~~~~~v~~SS~-~vy~~~~~~~~~~E~~~~~p~----  171 (346)
T 4egb_A          100 QVIVNFAAESHV-DRSIENPIPFYDTNVIGTVTLLELVKK--YPHIKLVQVSTD-EVYGSLGKTGRFTEETPLAPN----  171 (346)
T ss_dssp             CEEEECCCCC----------CHHHHHHTHHHHHHHHHHHH--STTSEEEEEEEG-GGGCCCCSSCCBCTTSCCCCC----
T ss_pred             CEEEECCcccch-hhhhhCHHHHHHHHHHHHHHHHHHHHh--cCCCEEEEeCch-HHhCCCCcCCCcCCCCCCCCC----
Confidence            999999997432 334456678899999999999999999  788999999999 8998    3467777764321    


Q ss_pred             hhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHH--HHHhCCCC---CCCCCccccccHHH
Q 017977          194 VYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL---GSGQQWFSWIHLDD  268 (363)
Q Consensus       194 ~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~D  268 (363)
                          ..|+.+|+..+......... .+++++++||+.+|||..... .+++.+  ....+.++   +++.+.+++||++|
T Consensus       172 ----~~Y~~sK~~~E~~~~~~~~~-~g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  245 (346)
T 4egb_A          172 ----SPYSSSKASADMIALAYYKT-YQLPVIVTRCSNNYGPYQYPE-KLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTD  245 (346)
T ss_dssp             ----SHHHHHHHHHHHHHHHHHHH-HCCCEEEEEECEEESTTCCTT-SHHHHHHHHHHTTCCCEEETTSCCEECEEEHHH
T ss_pred             ----ChhHHHHHHHHHHHHHHHHH-hCCCEEEEeecceeCcCCCcc-chHHHHHHHHHcCCCceeeCCCCeEEeeEEHHH
Confidence                22555565555444443333 389999999999999976432 233333  34455554   77888999999999


Q ss_pred             HHHHHHHHhcCCCCCceEEeeCCCCcCHHHHHHHHHHHhCCCCC-CCCcHHHHHHHhccCceeeecCcccChhhHH-HcC
Q 017977          269 IVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSW-LPVPEFALKAVLGEGAFVVLEGQRVVPARAK-ELG  346 (363)
Q Consensus       269 ~a~a~~~~~~~~~~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~lG  346 (363)
                      +|++++.+++++..+++||+++++++++.|+++.+.+.+|.+.. +...         ...........++++|++ .||
T Consensus       246 va~a~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~---------~~~~~~~~~~~~d~~k~~~~lG  316 (346)
T 4egb_A          246 HCSAIDVVLHKGRVGEVYNIGGNNEKTNVEVVEQIITLLGKTKKDIEYV---------TDRLGHDRRYAINAEKMKNEFD  316 (346)
T ss_dssp             HHHHHHHHHHHCCTTCEEEECCSCCEEHHHHHHHHHHHHTCCGGGCEEE---------CC--CCCSCCCBCCHHHHHHHC
T ss_pred             HHHHHHHHHhcCCCCCEEEECCCCceeHHHHHHHHHHHhCCCccccccc---------CCCCCCcceeeccHHHHHHHcC
Confidence            99999999988776669999999999999999999999998732 1110         000111133457899996 599


Q ss_pred             CCcccccHHHHHHHHhC
Q 017977          347 FPFKYRYVKDALKAIMS  363 (363)
Q Consensus       347 ~~p~~~~~~~~l~~~~~  363 (363)
                      |+|+++ ++++|+++++
T Consensus       317 ~~p~~~-~~e~l~~~~~  332 (346)
T 4egb_A          317 WEPKYT-FEQGLQETVQ  332 (346)
T ss_dssp             CCCCCC-HHHHHHHHHH
T ss_pred             CCCCCC-HHHHHHHHHH
Confidence            999997 9999999863

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=100.00  E-value=3.5e-39  Score=288.75  Aligned_cols=288  Identities=19%  Similarity=0.201  Sum_probs=209.4

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCCCCCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGT  130 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~~~~~  130 (363)
                      |+|||||||||||++|+++|+++|++|++++|+..........  ......+|+.|.+ +.+++++ |+|||+|+.. ..
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~Dl~d~~-~~~~~~~-d~vih~A~~~-~~   75 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFVNP--SAELHVRDLKDYS-WGAGIKG-DVVFHFAANP-EV   75 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGSCT--TSEEECCCTTSTT-TTTTCCC-SEEEECCSSC-SS
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhcCC--CceEEECccccHH-HHhhcCC-CEEEECCCCC-Cc
Confidence            6899999999999999999999999999999987665443311  1224567999988 8888888 9999999963 23


Q ss_pred             CCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC---CcccccccCCCcchhhhhhhcccchhhHHHH
Q 017977          131 RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM---RAAHQEMITWLSDYCAKVYCLVSFNRGVLVC  207 (363)
Q Consensus       131 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg---~~~~~e~~~~~~~~~~~~~~~~~y~~~k~~~  207 (363)
                      ......+...+++|+.++.++++++.+  .+++++||+||. ++||   ..+++|+.+..+.        +.|+.+|+..
T Consensus        76 ~~~~~~~~~~~~~n~~~~~~l~~a~~~--~~~~~iv~~SS~-~vyg~~~~~~~~e~~~~~p~--------~~Y~~sK~~~  144 (312)
T 3ko8_A           76 RLSTTEPIVHFNENVVATFNVLEWARQ--TGVRTVVFASSS-TVYGDADVIPTPEEEPYKPI--------SVYGAAKAAG  144 (312)
T ss_dssp             SGGGSCHHHHHHHHHHHHHHHHHHHHH--HTCCEEEEEEEG-GGGCSCSSSSBCTTSCCCCC--------SHHHHHHHHH
T ss_pred             hhhhhCHHHHHHHHHHHHHHHHHHHHH--cCCCEEEEeCcH-HHhCCCCCCCCCCCCCCCCC--------ChHHHHHHHH
Confidence            445566788999999999999999999  788899999999 8998   4567777654221        2245556444


Q ss_pred             HHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHH-HH-HHHhC-CC---CCCCCCccccccHHHHHHHHHHHhcC--
Q 017977          208 REWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIP-LF-MMFAG-GP---LGSGQQWFSWIHLDDIVNLIYEALSN--  279 (363)
Q Consensus       208 ~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~-~~-~~~~~-~~---~~~~~~~~~~i~v~D~a~a~~~~~~~--  279 (363)
                      +......... .+++++++||+++|||....  .++. .+ ....+ .+   ++++.+.++++|++|+|++++.++++  
T Consensus       145 e~~~~~~~~~-~g~~~~~lrp~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~  221 (312)
T 3ko8_A          145 EVMCATYARL-FGVRCLAVRYANVVGPRLRH--GVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFE  221 (312)
T ss_dssp             HHHHHHHHHH-HCCEEEEEEECEEECTTCCS--SHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHH-hCCCEEEEeeccccCcCCCC--ChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHhcc
Confidence            4444433333 38999999999999997543  2222 22 22333 22   37788899999999999999999987  


Q ss_pred             -C-CCCceEEeeCCCCcCHHHHHHHHHHHhCCCCCCC-CcHHHHHH-HhccCceeeecCcccChhhHH-HcCCCcccccH
Q 017977          280 -P-SYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLP-VPEFALKA-VLGEGAFVVLEGQRVVPARAK-ELGFPFKYRYV  354 (363)
Q Consensus       280 -~-~~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~k~~-~lG~~p~~~~~  354 (363)
                       . ..+++||+++++++++.|+++.+.+.+|.+..+. .|...... ...+     .....++++|++ .|||+|+++ +
T Consensus       222 ~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~-----~~~~~~d~~k~~~~lG~~p~~~-~  295 (312)
T 3ko8_A          222 EMDAPFLALNVGNVDAVRVLDIAQIVAEVLGLRPEIRLVPSTPDGRGWPGD-----VKYMTLAVTKLMKLTGWRPTMT-S  295 (312)
T ss_dssp             HSCCSEEEEEESCSSCEEHHHHHHHHHHHHTCCCEEEEC----------CC-----CSEECBCCHHHHHHHCCCCSSC-H
T ss_pred             ccCCCCcEEEEcCCCceeHHHHHHHHHHHhCCCCceeecCccccccCCCCC-----ccccccCHHHHHHHhCCCCCCC-H
Confidence             3 3556999999999999999999999999874322 22211110 1111     123457799994 699999997 9


Q ss_pred             HHHHHHHhC
Q 017977          355 KDALKAIMS  363 (363)
Q Consensus       355 ~~~l~~~~~  363 (363)
                      +++|+++++
T Consensus       296 ~~~l~~~~~  304 (312)
T 3ko8_A          296 AEAVKKTAE  304 (312)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999999863

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=100.00  E-value=2.1e-40  Score=303.92  Aligned_cols=306  Identities=12%  Similarity=0.111  Sum_probs=217.1

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhC-CCEEEEEeCCCCcccccCCCCCccccCccccc-CcchHHhhccCCCEEEEccC
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIA-EEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      ++||+|||||||||||++|+++|+++ |++|++++|+..+...+..... ..+..+|+. |.+.+.++++++|+|||+|+
T Consensus        22 m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~-v~~~~~Dl~~d~~~~~~~~~~~d~Vih~A~  100 (372)
T 3slg_A           22 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHER-MHFFEGDITINKEWVEYHVKKCDVILPLVA  100 (372)
T ss_dssp             -CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTT-EEEEECCTTTCHHHHHHHHHHCSEEEECBC
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCC-eEEEeCccCCCHHHHHHHhccCCEEEEcCc
Confidence            45689999999999999999999998 9999999999876554432221 224568999 88999999999999999999


Q ss_pred             CCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC---CcccccccCCCcchhhhhhhcccchh
Q 017977          126 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM---RAAHQEMITWLSDYCAKVYCLVSFNR  202 (363)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg---~~~~~e~~~~~~~~~~~~~~~~~y~~  202 (363)
                      .... .....++...+++|+.++.+++++|.+  .+ +++||+||. ++||   ..+++|+.++... .......+.|+.
T Consensus       101 ~~~~-~~~~~~~~~~~~~nv~~~~~ll~a~~~--~~-~~~v~~SS~-~vyg~~~~~~~~e~~~~~~~-~p~~~p~~~Y~~  174 (372)
T 3slg_A          101 IATP-ATYVKQPLRVFELDFEANLPIVRSAVK--YG-KHLVFPSTS-EVYGMCADEQFDPDASALTY-GPINKPRWIYAC  174 (372)
T ss_dssp             CCCH-HHHHHCHHHHHHHHTTTTHHHHHHHHH--HT-CEEEEECCG-GGGBSCCCSSBCTTTCCEEE-CCTTCTTHHHHH
T ss_pred             cccH-HHHhhCHHHHHHHHHHHHHHHHHHHHH--hC-CcEEEeCcH-HHhCCCCCCCCCcccccccc-CCCCCCCCcHHH
Confidence            7422 122345678889999999999999999  67 889999998 8999   4466676643110 000011123666


Q ss_pred             hHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCc-------ccchHHHH--HHHhCCCC---CCCCCccccccHHHHH
Q 017977          203 GVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA-------LAKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIV  270 (363)
Q Consensus       203 ~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~-------~~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~D~a  270 (363)
                      +|+..+........ . +++++++||+++|||....       ...++..+  ....+.++   +++++.++++|++|+|
T Consensus       175 sK~~~E~~~~~~~~-~-g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva  252 (372)
T 3slg_A          175 SKQLMDRVIWGYGM-E-GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVDDGI  252 (372)
T ss_dssp             HHHHHHHHHHHHHT-T-TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEECEEHHHHH
T ss_pred             HHHHHHHHHHHHHH-C-CCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEEEEEEHHHHH
Confidence            66555555444433 3 8999999999999997532       12334333  44455554   5678899999999999


Q ss_pred             HHHHHHhcCCC---CCceEEeeCC-CCcCHHHHHHHHHHHhCCCCCCCCcHHHHHH------HhccCceeeecCcccChh
Q 017977          271 NLIYEALSNPS---YRGVINGTAP-NPVRLAEMCDHLGNVLGRPSWLPVPEFALKA------VLGEGAFVVLEGQRVVPA  340 (363)
Q Consensus       271 ~a~~~~~~~~~---~~g~~~i~~~-~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~  340 (363)
                      ++++.+++++.   .+++||++++ +++++.|+++.+.+.+|.+..+.........      .+............++++
T Consensus       253 ~a~~~~~~~~~~~~~~~~~ni~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  332 (372)
T 3slg_A          253 SALMKIIENSNGVATGKIYNIGNPNNNFSVRELANKMLELAAEFPEYADSAKRVKLVETTSGAYYGNGYQDVQNRVPKIE  332 (372)
T ss_dssp             HHHHHHHHCGGGTTTTEEEEECCTTCEEEHHHHHHHHHHHHHHCTTTHHHHHTCCEEEC-------------CCCCBCCH
T ss_pred             HHHHHHHhcccCcCCCceEEeCCCCCCccHHHHHHHHHHHhCCCcccccccccceeeeccccccccCCccccceeecCHH
Confidence            99999998864   4569999994 8999999999999999976322110000000      000000012234566899


Q ss_pred             hHHH-cCCCcccccHHHHHHHHhC
Q 017977          341 RAKE-LGFPFKYRYVKDALKAIMS  363 (363)
Q Consensus       341 k~~~-lG~~p~~~~~~~~l~~~~~  363 (363)
                      |+++ |||+|+++ ++++|+++++
T Consensus       333 k~~~~lG~~p~~~-l~e~l~~~~~  355 (372)
T 3slg_A          333 NTMQELGWAPQFT-FDDALRQIFE  355 (372)
T ss_dssp             HHHHHHTCCCCCC-HHHHHHHHHH
T ss_pred             HHHHHcCCCCCCC-HHHHHHHHHH
Confidence            9975 99999997 9999999863

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=100.00  E-value=1e-39  Score=296.64  Aligned_cols=281  Identities=19%  Similarity=0.205  Sum_probs=212.2

Q ss_pred             CCCCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           46 QKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        46 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      ...++|+|||||||||||++|+++|+++|++|++++|++..     ..   ..+..+|+.|.+++.++++++|+|||+|+
T Consensus        15 ~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-----~~---~~~~~~Dl~d~~~~~~~~~~~d~vih~A~   86 (347)
T 4id9_A           15 VPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-----TG---GEEVVGSLEDGQALSDAIMGVSAVLHLGA   86 (347)
T ss_dssp             ------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-----SC---CSEEESCTTCHHHHHHHHTTCSEEEECCC
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-----CC---ccEEecCcCCHHHHHHHHhCCCEEEECCc
Confidence            33455799999999999999999999999999999998765     11   12556899999999999999999999999


Q ss_pred             CCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC-----CcccccccCCCcchhhhhhhcccc
Q 017977          126 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM-----RAAHQEMITWLSDYCAKVYCLVSF  200 (363)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg-----~~~~~e~~~~~~~~~~~~~~~~~y  200 (363)
                      ...   ......+..+++|+.++.+++++|.+  .+++++||+||. ++||     ..+++|+.+..+        ...|
T Consensus        87 ~~~---~~~~~~~~~~~~nv~~~~~ll~a~~~--~~~~~~V~~SS~-~vyg~~~~~~~~~~E~~~~~~--------~~~Y  152 (347)
T 4id9_A           87 FMS---WAPADRDRMFAVNVEGTRRLLDAASA--AGVRRFVFASSG-EVYPENRPEFLPVTEDHPLCP--------NSPY  152 (347)
T ss_dssp             CCC---SSGGGHHHHHHHHTHHHHHHHHHHHH--TTCSEEEEEEEG-GGTTTTSCSSSSBCTTSCCCC--------CSHH
T ss_pred             ccC---cchhhHHHHHHHHHHHHHHHHHHHHH--cCCCeEEEECCH-HHhCCCCCCCCCcCCCCCCCC--------CChH
Confidence            742   23344588999999999999999999  789999999999 8998     345677665332        1225


Q ss_pred             hhhHHHHHHHHHHHhccCCCceEEEEeeceEE-------------eCCCCcc----------cchHHHH--HHHhCCCC-
Q 017977          201 NRGVLVCREWEGTALKVNKDVRLALIRIGIVL-------------GKDGGAL----------AKMIPLF--MMFAGGPL-  254 (363)
Q Consensus       201 ~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~-------------g~~~~~~----------~~~~~~~--~~~~~~~~-  254 (363)
                      +.+|+..+......... .+++++++||+.+|             ||.....          ..++..+  ....+.++ 
T Consensus       153 ~~sK~~~E~~~~~~~~~-~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (347)
T 4id9_A          153 GLTKLLGEELVRFHQRS-GAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPSH  231 (347)
T ss_dssp             HHHHHHHHHHHHHHHHH-SSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSCCE
T ss_pred             HHHHHHHHHHHHHHHHh-cCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCCCeE
Confidence            55565555554444333 48999999999999             7653221          2333333  33445443 


Q ss_pred             --CCCCCcccc----ccHHHHHHHHHHHhcCCC-CCceEEeeCCCCcCHHHHHHHHHHHhCCCCCC-CCcHHHHHHHhcc
Q 017977          255 --GSGQQWFSW----IHLDDIVNLIYEALSNPS-YRGVINGTAPNPVRLAEMCDHLGNVLGRPSWL-PVPEFALKAVLGE  326 (363)
Q Consensus       255 --~~~~~~~~~----i~v~D~a~a~~~~~~~~~-~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~~-~~~~~~~~~~~~~  326 (363)
                        +++.+.+++    +|++|+|++++.+++++. .+++||+++++++++.|+++.+.+.+|.+..+ ..|..        
T Consensus       232 ~~g~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~--------  303 (347)
T 4id9_A          232 ILARNENGRPFRMHITDTRDMVAGILLALDHPEAAGGTFNLGADEPADFAALLPKIAALTGLPIVTVDFPGD--------  303 (347)
T ss_dssp             EEEECTTCCBCEECEEEHHHHHHHHHHHHHCGGGTTEEEEESCSSCEEHHHHHHHHHHHHCCCEEEEECSSC--------
T ss_pred             EeCCCCcccCCccCcEeHHHHHHHHHHHhcCcccCCCeEEECCCCcccHHHHHHHHHHHhCCCCceeeCCCc--------
Confidence              567788899    999999999999999874 56699999999999999999999999986321 12211        


Q ss_pred             CceeeecCcccChhhHHH-cCCCcccccHHHHHHHHhC
Q 017977          327 GAFVVLEGQRVVPARAKE-LGFPFKYRYVKDALKAIMS  363 (363)
Q Consensus       327 ~~~~~~~~~~~~~~k~~~-lG~~p~~~~~~~~l~~~~~  363 (363)
                      .     ....++++|+++ |||+|+++ ++++|+++++
T Consensus       304 ~-----~~~~~d~~k~~~~lG~~p~~~-~~~~l~~~~~  335 (347)
T 4id9_A          304 G-----VYYHTSNERIRNTLGFEAEWT-MDRMLEEAAT  335 (347)
T ss_dssp             C-----CBCCBCCHHHHHHHCCCCCCC-HHHHHHHHHH
T ss_pred             c-----cccccCHHHHHHHhCCCCCCC-HHHHHHHHHH
Confidence            0     145678999975 99999997 9999999863

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=100.00  E-value=1.1e-39  Score=288.38  Aligned_cols=267  Identities=15%  Similarity=0.125  Sum_probs=204.0

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccC-CCEEEEccCCC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQG-STAVVNLAGTP  127 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-~d~Vi~~a~~~  127 (363)
                      +||+||||| +||||++|+++|+++|++|++++|+.+....   .   ..+..+|+.|.+++.+++++ +|+|||+|+..
T Consensus         2 ~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~---~~~~~~Dl~d~~~~~~~~~~~~d~vih~a~~~   74 (286)
T 3gpi_A            2 SLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPMPA---G---VQTLIADVTRPDTLASIVHLRPEILVYCVAAS   74 (286)
T ss_dssp             CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCCCT---T---CCEEECCTTCGGGCTTGGGGCCSEEEECHHHH
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccccc---C---CceEEccCCChHHHHHhhcCCCCEEEEeCCCC
Confidence            357999999 5999999999999999999999998765321   1   12556899999999999987 99999999852


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC---CcccccccCCCcchhhhhhhcccchhhH
Q 017977          128 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM---RAAHQEMITWLSDYCAKVYCLVSFNRGV  204 (363)
Q Consensus       128 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg---~~~~~e~~~~~~~~~~~~~~~~~y~~~k  204 (363)
                            ...++..+++|+.++.+++++|.+  .++++|||+||. ++||   ..+++|+.+..+.        +.|+.+|
T Consensus        75 ------~~~~~~~~~~n~~~~~~ll~a~~~--~~~~~~v~~SS~-~vyg~~~~~~~~E~~~~~p~--------~~Y~~sK  137 (286)
T 3gpi_A           75 ------EYSDEHYRLSYVEGLRNTLSALEG--APLQHVFFVSST-GVYGQEVEEWLDEDTPPIAK--------DFSGKRM  137 (286)
T ss_dssp             ------HHC-----CCSHHHHHHHHHHTTT--SCCCEEEEEEEG-GGCCCCCSSEECTTSCCCCC--------SHHHHHH
T ss_pred             ------CCCHHHHHHHHHHHHHHHHHHHhh--CCCCEEEEEccc-EEEcCCCCCCCCCCCCCCCC--------ChhhHHH
Confidence                  234567888999999999999998  788999999999 8999   4567887764321        1244444


Q ss_pred             HHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHHHHHhcC---CC
Q 017977          205 LVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN---PS  281 (363)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~---~~  281 (363)
                      +..+..    ..  . ++++++||+++||+....   ++..+.  .....+.+++.++++|++|+|++++.++++   ..
T Consensus       138 ~~~E~~----~~--~-~~~~ilR~~~v~G~~~~~---~~~~~~--~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~  205 (286)
T 3gpi_A          138 LEAEAL----LA--A-YSSTILRFSGIYGPGRLR---MIRQAQ--TPEQWPARNAWTNRIHRDDGAAFIAYLIQQRSHAV  205 (286)
T ss_dssp             HHHHHH----GG--G-SSEEEEEECEEEBTTBCH---HHHHTT--CGGGSCSSBCEECEEEHHHHHHHHHHHHHHHTTSC
T ss_pred             HHHHHH----Hh--c-CCeEEEecccccCCCchh---HHHHHH--hcccCCCcCceeEEEEHHHHHHHHHHHHhhhccCC
Confidence            333333    11  2 899999999999997642   222221  111236778889999999999999999987   34


Q ss_pred             CCceEEeeCCCCcCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhccCceeeecCcccChhhHHHcCCCcccccHHHHHHHH
Q 017977          282 YRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAI  361 (363)
Q Consensus       282 ~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~p~~~~~~~~l~~~  361 (363)
                      .+++||+++++++++.|+++.+.+.+|.+..+..+.            .......++++|+++|||+|++++|+|+|+++
T Consensus       206 ~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~------------~~~~~~~~d~~k~~~lG~~p~~~~l~e~l~~~  273 (286)
T 3gpi_A          206 PERLYIVTDNQPLPVHDLLRWLADRQGIAYPAGATP------------PVQGNKKLSNARLLASGYQLIYPDYVSGYGAL  273 (286)
T ss_dssp             CCSEEEECCSCCEEHHHHHHHHHHHTTCCCCCSCCC------------CBCSSCEECCHHHHHTTCCCSSCSHHHHHHHH
T ss_pred             CCceEEEeCCCCCCHHHHHHHHHHHcCCCCCCCCCc------------ccCCCeEeeHHHHHHcCCCCcCCcHHHHHHHH
Confidence            677999999999999999999999999875443332            11245668899999999999995599999998


Q ss_pred             hC
Q 017977          362 MS  363 (363)
Q Consensus       362 ~~  363 (363)
                      ++
T Consensus       274 ~~  275 (286)
T 3gpi_A          274 LA  275 (286)
T ss_dssp             HH
T ss_pred             HH
Confidence            63

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=1.3e-39  Score=295.12  Aligned_cols=292  Identities=17%  Similarity=0.170  Sum_probs=214.8

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCC-----CCccccCcccccCcchHHhhcc--CCCEEE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KKTRFFPGVMIAEEPQWRDCIQ--GSTAVV  121 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~--~~d~Vi  121 (363)
                      .+|+||||||+||||++|+++|+++|++|++++|+..........     .....+..+|+.|.+++.++++  ++|+||
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi   83 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAAI   83 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEE
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEE
Confidence            457999999999999999999999999999999987654322100     0111245689999999999998  899999


Q ss_pred             EccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC---CcccccccCCCcchhhhhhhcc
Q 017977          122 NLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM---RAAHQEMITWLSDYCAKVYCLV  198 (363)
Q Consensus       122 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg---~~~~~e~~~~~~~~~~~~~~~~  198 (363)
                      |+|+.... ......+...+++|+.++.++++++.+  .+++++|++||. ++||   ..+++|+.+..+        .+
T Consensus        84 h~A~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~iv~~SS~-~~~g~~~~~~~~e~~~~~~--------~~  151 (341)
T 3enk_A           84 HFAALKAV-GESVAKPIEYYRNNLDSLLSLLRVMRE--RAVKRIVFSSSA-TVYGVPERSPIDETFPLSA--------TN  151 (341)
T ss_dssp             ECCCCCCH-HHHHHCHHHHHHHHHHHHHHHHHHHHH--TTCCEEEEEEEG-GGBCSCSSSSBCTTSCCBC--------SS
T ss_pred             ECcccccc-CccccChHHHHHHHHHHHHHHHHHHHh--CCCCEEEEEecc-eEecCCCCCCCCCCCCCCC--------CC
Confidence            99997422 223344568899999999999999999  788899999998 8898   456777766432        12


Q ss_pred             cchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCc---------ccchHHHH-HHHhC--CCC---C------CC
Q 017977          199 SFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA---------LAKMIPLF-MMFAG--GPL---G------SG  257 (363)
Q Consensus       199 ~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~---------~~~~~~~~-~~~~~--~~~---~------~~  257 (363)
                      .|+.+|+..+...........+++++++||+++|||....         ...+++.+ ....+  .++   +      ++
T Consensus       152 ~Y~~sK~~~e~~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g  231 (341)
T 3enk_A          152 PYGQTKLMAEQILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDG  231 (341)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTTS
T ss_pred             hhHHHHHHHHHHHHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCCC
Confidence            2555665555555544444336999999999999995311         13344444 22333  222   3      78


Q ss_pred             CCccccccHHHHHHHHHHHhcCC---CCCceEEeeCCCCcCHHHHHHHHHHHhCCCCCCC-CcHHHHHHHhccCceeeec
Q 017977          258 QQWFSWIHLDDIVNLIYEALSNP---SYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLP-VPEFALKAVLGEGAFVVLE  333 (363)
Q Consensus       258 ~~~~~~i~v~D~a~a~~~~~~~~---~~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~  333 (363)
                      ++.++++|++|+|++++.++++.   ..+++||+++++++++.|+++.+.+.+|.+..+. .|.     ..++     ..
T Consensus       232 ~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~-----~~~~-----~~  301 (341)
T 3enk_A          232 TGVRDYIHVVDLARGHIAALDALERRDASLTVNLGTGRGYSVLEVVRAFEKASGRAVPYELVAR-----RPGD-----VA  301 (341)
T ss_dssp             SCEECEEEHHHHHHHHHHHHHHHHHHTSCEEEEESCSCCEEHHHHHHHHHHHHCSCCCEEEECC-----CTTC-----CS
T ss_pred             CeeEeeEEHHHHHHHHHHHHHhhhcCCcceEEEeCCCCceeHHHHHHHHHHHhCCCcceeeCCC-----CCCC-----cc
Confidence            88999999999999999999762   3566999999999999999999999999873321 111     0111     12


Q ss_pred             CcccChhhHH-HcCCCcccccHHHHHHHHhC
Q 017977          334 GQRVVPARAK-ELGFPFKYRYVKDALKAIMS  363 (363)
Q Consensus       334 ~~~~~~~k~~-~lG~~p~~~~~~~~l~~~~~  363 (363)
                      ...++++|++ +|||+|+++ ++++|+++++
T Consensus       302 ~~~~d~~k~~~~lG~~p~~~-l~~~l~~~~~  331 (341)
T 3enk_A          302 ECYANPAAAAETIGWKAERD-LERMCADHWR  331 (341)
T ss_dssp             EECBCCHHHHHHHCCCCCCC-HHHHHHHHHH
T ss_pred             ccccCHHHHHHHcCCCCCCC-HHHHHHHHHH
Confidence            3456799996 599999997 9999999863

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=100.00  E-value=4.3e-38  Score=287.52  Aligned_cols=285  Identities=14%  Similarity=0.095  Sum_probs=210.4

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHh--CCCEEEEEeCCCCc------------ccccCCCCCccccCcccccCcchHHhh
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQA--DNHQVRVLTRSRSK------------AELIFPGKKTRFFPGVMIAEEPQWRDC  113 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~--~g~~V~~~~r~~~~------------~~~~~~~~~~~~~~~~d~~~~~~~~~~  113 (363)
                      .++|+||||||+||||++|+++|++  +|++|++++|+...            ....... ....+..+|+.|.+++.++
T Consensus         8 ~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~d~~~~~~~   86 (362)
T 3sxp_A            8 LENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIG-FKGEVIAADINNPLDLRRL   86 (362)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTT-CCSEEEECCTTCHHHHHHH
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccc-cCceEEECCCCCHHHHHHh
Confidence            4568999999999999999999999  99999999997651            1110111 1112456899999999998


Q ss_pred             -ccCCCEEEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC--CcccccccCCCcch
Q 017977          114 -IQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM--RAAHQEMITWLSDY  190 (363)
Q Consensus       114 -~~~~d~Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg--~~~~~e~~~~~~~~  190 (363)
                       ..++|+|||+|+...   .....++..+++|+.++.++++++.+  .+++ +||+||. ++||  ..+++|+.+..+. 
T Consensus        87 ~~~~~D~vih~A~~~~---~~~~~~~~~~~~Nv~gt~~ll~aa~~--~~~~-~V~~SS~-~vyg~~~~~~~E~~~~~p~-  158 (362)
T 3sxp_A           87 EKLHFDYLFHQAAVSD---TTMLNQELVMKTNYQAFLNLLEIARS--KKAK-VIYASSA-GVYGNTKAPNVVGKNESPE-  158 (362)
T ss_dssp             TTSCCSEEEECCCCCG---GGCCCHHHHHHHHTHHHHHHHHHHHH--TTCE-EEEEEEG-GGGCSCCSSBCTTSCCCCS-
T ss_pred             hccCCCEEEECCccCC---ccccCHHHHHHHHHHHHHHHHHHHHH--cCCc-EEEeCcH-HHhCCCCCCCCCCCCCCCC-
Confidence             789999999999632   23456788999999999999999999  7777 9999998 8999  4477887764321 


Q ss_pred             hhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc---cchHHHH--HHHhCCCC---CCCCCccc
Q 017977          191 CAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL---AKMIPLF--MMFAGGPL---GSGQQWFS  262 (363)
Q Consensus       191 ~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~---~~~~~~~--~~~~~~~~---~~~~~~~~  262 (363)
                             +.|+.+|+..+....... .  .++++++||+++|||+....   ..++..+  ....+.++   +++.+.++
T Consensus       159 -------~~Y~~sK~~~E~~~~~~~-~--~~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  228 (362)
T 3sxp_A          159 -------NVYGFSKLCMDEFVLSHS-N--DNVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRD  228 (362)
T ss_dssp             -------SHHHHHHHHHHHHHHHTT-T--TSCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCEEE
T ss_pred             -------ChhHHHHHHHHHHHHHHh-c--cCCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeEEc
Confidence                   124444544333333222 1  38999999999999986432   1333333  33445443   66778899


Q ss_pred             cccHHHHHHHHHHHhcCCCCCceEEeeCCCCcCHHHHHHHHHHHhCCCC-CCCCcHHHHHHHhccCceeeecCcccChhh
Q 017977          263 WIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPS-WLPVPEFALKAVLGEGAFVVLEGQRVVPAR  341 (363)
Q Consensus       263 ~i~v~D~a~a~~~~~~~~~~~g~~~i~~~~~~s~~el~~~i~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k  341 (363)
                      ++|++|+|++++.+++.+. .|+||+++++++++.|+++.+.+.+| +. ....|...         ........++++|
T Consensus       229 ~i~v~Dva~ai~~~~~~~~-~g~~~i~~~~~~s~~e~~~~i~~~~g-~~~~~~~~~~~---------~~~~~~~~~d~~k  297 (362)
T 3sxp_A          229 FVYIEDVIQANVKAMKAQK-SGVYNVGYSQARSYNEIVSILKEHLG-DFKVTYIKNPY---------AFFQKHTQAHIEP  297 (362)
T ss_dssp             CEEHHHHHHHHHHHTTCSS-CEEEEESCSCEEEHHHHHHHHHHHHC-CCEEECCC----------------CCCCBCCHH
T ss_pred             cEEHHHHHHHHHHHHhcCC-CCEEEeCCCCCccHHHHHHHHHHHcC-CCceEECCCCC---------cCcccceecCHHH
Confidence            9999999999999998775 45999999999999999999999999 52 22233221         1112456678999


Q ss_pred             HH-HcCCCcccccHHHHHHHHhC
Q 017977          342 AK-ELGFPFKYRYVKDALKAIMS  363 (363)
Q Consensus       342 ~~-~lG~~p~~~~~~~~l~~~~~  363 (363)
                      ++ .|||+|+++ ++++|+++++
T Consensus       298 ~~~~lG~~p~~~-l~e~l~~~~~  319 (362)
T 3sxp_A          298 TILDLDYTPLYD-LESGIKDYLP  319 (362)
T ss_dssp             HHHHHCCCCCCC-HHHHHHHHHH
T ss_pred             HHHHhCCCCCCC-HHHHHHHHHH
Confidence            95 699999997 9999999863

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=100.00  E-value=2e-38  Score=287.51  Aligned_cols=295  Identities=18%  Similarity=0.145  Sum_probs=208.8

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCCCC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPI  128 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~~~  128 (363)
                      ++|+|||||||||||++|+++|+++|++|++++|++.+...+...  ......+|+.|.+++.++++++|+|||+|+...
T Consensus        12 ~~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~--~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~   89 (342)
T 2x4g_A           12 AHVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYL--EPECRVAEMLDHAGLERALRGLDGVIFSAGYYP   89 (342)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGGG--CCEEEECCTTCHHHHHHHTTTCSEEEEC-----
T ss_pred             cCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhccC--CeEEEEecCCCHHHHHHHHcCCCEEEECCccCc
Confidence            347999999999999999999999999999999988765433210  112446799999999999999999999999632


Q ss_pred             CCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC--Cc--ccccccCCCcchhhhhhhcccchhhH
Q 017977          129 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM--RA--AHQEMITWLSDYCAKVYCLVSFNRGV  204 (363)
Q Consensus       129 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg--~~--~~~e~~~~~~~~~~~~~~~~~y~~~k  204 (363)
                         ........++++|+.++.+++++|.+  .+++++||+||. ++|+  ..  ..+|+.+..+...    ....|+.+|
T Consensus        90 ---~~~~~~~~~~~~n~~~~~~l~~a~~~--~~~~~~v~~SS~-~~~~~~~~~~~~~E~~~~~p~~~----~~~~Y~~sK  159 (342)
T 2x4g_A           90 ---SRPRRWQEEVASALGQTNPFYAACLQ--ARVPRILYVGSA-YAMPRHPQGLPGHEGLFYDSLPS----GKSSYVLCK  159 (342)
T ss_dssp             ----------CHHHHHHHHHHHHHHHHHH--HTCSCEEEECCG-GGSCCCTTSSCBCTTCCCSSCCT----TSCHHHHHH
T ss_pred             ---CCCCCHHHHHHHHHHHHHHHHHHHHH--cCCCeEEEECCH-HhhCcCCCCCCCCCCCCCCcccc----ccChHHHHH
Confidence               22345677899999999999999999  788999999999 8888  21  2367666443110    012356666


Q ss_pred             HHHHHHHHHHhccCCCceEEEEeeceEEeCCC-Cc-ccchHHHHHHHhCCCCCCCCCccccccHHHHHHHHHHHhcCCCC
Q 017977          205 LVCREWEGTALKVNKDVRLALIRIGIVLGKDG-GA-LAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSY  282 (363)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~  282 (363)
                      +..+........ . +++++++||+.+||+.. .. ...++.  ....+..+.-+++.+++++++|+|++++.+++++..
T Consensus       160 ~~~e~~~~~~~~-~-g~~~~ilrp~~v~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~  235 (342)
T 2x4g_A          160 WALDEQAREQAR-N-GLPVVIGIPGMVLGELDIGPTTGRVIT--AIGNGEMTHYVAGQRNVIDAAEAGRGLLMALERGRI  235 (342)
T ss_dssp             HHHHHHHHHHHH-T-TCCEEEEEECEEECSCCSSCSTTHHHH--HHHTTCCCEEECCEEEEEEHHHHHHHHHHHHHHSCT
T ss_pred             HHHHHHHHHHhh-c-CCcEEEEeCCceECCCCccccHHHHHH--HHHcCCCccccCCCcceeeHHHHHHHHHHHHhCCCC
Confidence            555555444333 4 89999999999999976 21 222222  223444331156788999999999999999987666


Q ss_pred             CceEEeeCCCCcCHHHHHHHHHHHhCCCCCCCCcHHHHHHHh----------c-------cCceeeecCcccChhhHHH-
Q 017977          283 RGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVL----------G-------EGAFVVLEGQRVVPARAKE-  344 (363)
Q Consensus       283 ~g~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~----------~-------~~~~~~~~~~~~~~~k~~~-  344 (363)
                      +++||+++++ +++.|+++.+.+.+|.+..+++|.+......          +       +..........++++|+++ 
T Consensus       236 g~~~~v~~~~-~s~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~  314 (342)
T 2x4g_A          236 GERYLLTGHN-LEMADLTRRIAELLGQPAPQPMSMAMARALATLGRLRYRVSGQLPLLDETAIEVMAGGQFLDGRKAREE  314 (342)
T ss_dssp             TCEEEECCEE-EEHHHHHHHHHHHHTCCCCEEECHHHHHHHHHHHHC----------------CCTTCCCCBCCHHHHHH
T ss_pred             CceEEEcCCc-ccHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHhcCcccChHHHHHh
Confidence            6699999999 9999999999999998743356666543221          1       0011112356678999975 


Q ss_pred             cCC-CcccccHHHHHHHHh
Q 017977          345 LGF-PFKYRYVKDALKAIM  362 (363)
Q Consensus       345 lG~-~p~~~~~~~~l~~~~  362 (363)
                      ||| +| ++ ++++|++++
T Consensus       315 lG~~~p-~~-~~~~l~~~~  331 (342)
T 2x4g_A          315 LGFFST-TA-LDDTLLRAI  331 (342)
T ss_dssp             HCCCCC-SC-HHHHHHHHH
T ss_pred             CCCCCC-CC-HHHHHHHHH
Confidence            999 99 65 999999876

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=100.00  E-value=3.4e-38  Score=289.64  Aligned_cols=291  Identities=19%  Similarity=0.225  Sum_probs=207.4

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCC-CEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      ..+|+|||||||||||++|+++|+++| ++|++++|+..................+|+.|.+++.++++++|+|||+|+.
T Consensus        30 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vih~A~~  109 (377)
T 2q1s_A           30 LANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASLQDEYDYVFHLATY  109 (377)
T ss_dssp             GTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHCCSCCSEEEECCCC
T ss_pred             hCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHHHhhCCCEEEECCCc
Confidence            345799999999999999999999999 9999999987653222211111224467999999999999999999999996


Q ss_pred             CCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCC-CCCCeEEEeccceecC---Ccccc--ccc---CC-Ccchhhhhhh
Q 017977          127 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPE-GVRPSVLELVKPKYLM---RAAHQ--EMI---TW-LSDYCAKVYC  196 (363)
Q Consensus       127 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~v~~SS~~~~yg---~~~~~--e~~---~~-~~~~~~~~~~  196 (363)
                      ... ......+...+++|+.++.+++++|.+  . +++++||+||. ++||   ..+++  |+.   +. .+        
T Consensus       110 ~~~-~~~~~~~~~~~~~nv~~~~~ll~a~~~--~~~~~~~V~~SS~-~vyg~~~~~~~~~~E~~~~~~~~~~--------  177 (377)
T 2q1s_A          110 HGN-QSSIHDPLADHENNTLTTLKLYERLKH--FKRLKKVVYSAAG-CSIAEKTFDDAKATEETDIVSLHNN--------  177 (377)
T ss_dssp             SCH-HHHHHCHHHHHHHHTHHHHHHHHHHTT--CSSCCEEEEEEEC---------------CCCCCCCSSCC--------
T ss_pred             cCc-hhhhhCHHHHHHHHHHHHHHHHHHHHH--hCCCCeEEEeCCH-HHcCCCCCCCcCcccccccccccCC--------
Confidence            321 112345678999999999999999998  7 88899999998 8998   33566  665   22 11        


Q ss_pred             cccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCC---------Ccc---cchHHHH--HHHhCCCC---CCCCC
Q 017977          197 LVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDG---------GAL---AKMIPLF--MMFAGGPL---GSGQQ  259 (363)
Q Consensus       197 ~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~---------~~~---~~~~~~~--~~~~~~~~---~~~~~  259 (363)
                      ...|+.+|+..+......... .+++++++||+.+||+..         ...   ..+++.+  ....+.++   +++++
T Consensus       178 ~~~Y~~sK~~~E~~~~~~~~~-~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~  256 (377)
T 2q1s_A          178 DSPYSMSKIFGEFYSVYYHKQ-HQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVA  256 (377)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHH-HCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGCC
T ss_pred             CCchHHHHHHHHHHHHHHHHH-hCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCCCe
Confidence            122455554444444333322 389999999999999976         220   2333333  33455543   56678


Q ss_pred             ccccccHHHHHHH-HHHHhcCCCCCceEEeeCCCCcCHHHHHHHHHHHhCCCCCC-CCcHHHHHHHhccCceeeecCccc
Q 017977          260 WFSWIHLDDIVNL-IYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWL-PVPEFALKAVLGEGAFVVLEGQRV  337 (363)
Q Consensus       260 ~~~~i~v~D~a~a-~~~~~~~~~~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  337 (363)
                      .+++++++|+|++ ++.+++++. .|+||+++++++++.|+++.+.+.+|.+..+ ..|..     .++..    ....+
T Consensus       257 ~~~~i~v~Dva~a~i~~~~~~~~-~g~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~-----~~~~~----~~~~~  326 (377)
T 2q1s_A          257 TRDFIFVEDVANGLIACAADGTP-GGVYNIASGKETSIADLATKINEITGNNTELDRLPKR-----PWDNS----GKRFG  326 (377)
T ss_dssp             EECCEEHHHHHHHHHHHHHHCCT-TEEEECCCCCCEEHHHHHHHHHHHHTCCSCCCCCCCC-----GGGCC-----CCCC
T ss_pred             EEeeEEHHHHHHHHHHHHHhcCC-CCeEEecCCCceeHHHHHHHHHHHhCCCCCceeCCCC-----ccccc----ccccc
Confidence            8999999999999 999998766 4599999999999999999999999987332 22210     11110    14667


Q ss_pred             ChhhHH-HcCCCcccccHHHHHHHHh
Q 017977          338 VPARAK-ELGFPFKYRYVKDALKAIM  362 (363)
Q Consensus       338 ~~~k~~-~lG~~p~~~~~~~~l~~~~  362 (363)
                      +++|++ .|||+|+++ ++|+|++++
T Consensus       327 d~~k~~~~lG~~p~~~-l~e~l~~~~  351 (377)
T 2q1s_A          327 SPEKARRELGFSADVS-IDDGLRKTI  351 (377)
T ss_dssp             CCHHHHHHHCCCCCCC-HHHHHHHHH
T ss_pred             CHHHHHHHcCCCCCCC-HHHHHHHHH
Confidence            899996 599999997 999999876

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=100.00  E-value=4.3e-38  Score=286.41  Aligned_cols=294  Identities=16%  Similarity=0.083  Sum_probs=213.2

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccc-cC---CC-----CCccccCcccccCcchHHhhccCCCE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL-IF---PG-----KKTRFFPGVMIAEEPQWRDCIQGSTA  119 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~---~~-----~~~~~~~~~d~~~~~~~~~~~~~~d~  119 (363)
                      .||+|||||||||||++|+++|+++|++|++++|+...... +.   ..     .....+..+|+.|.+++.++++++|+
T Consensus        26 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~  105 (352)
T 1sb8_A           26 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVDY  105 (352)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCSE
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCCCE
Confidence            45799999999999999999999999999999997643111 00   00     01112445799999999999999999


Q ss_pred             EEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC---CcccccccCCCcchhhhhhh
Q 017977          120 VVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM---RAAHQEMITWLSDYCAKVYC  196 (363)
Q Consensus       120 Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg---~~~~~e~~~~~~~~~~~~~~  196 (363)
                      |||+|+.... ......++..+++|+.++.++++++.+  .+++++||+||. ++|+   ..+++|+.+..+.       
T Consensus       106 vih~A~~~~~-~~~~~~~~~~~~~n~~~~~~l~~a~~~--~~~~~~v~~SS~-~~~~~~~~~~~~E~~~~~~~-------  174 (352)
T 1sb8_A          106 VLHQAALGSV-PRSINDPITSNATNIDGFLNMLIAARD--AKVQSFTYAASS-STYGDHPGLPKVEDTIGKPL-------  174 (352)
T ss_dssp             EEECCSCCCH-HHHHHCHHHHHHHHTHHHHHHHHHHHH--TTCSEEEEEEEG-GGGTTCCCSSBCTTCCCCCC-------
T ss_pred             EEECCcccCc-hhhhhCHHHHHHHHHHHHHHHHHHHHH--cCCCEEEEeccH-HhcCCCCCCCCCCCCCCCCC-------
Confidence            9999996321 112345678899999999999999999  788899999999 8888   3467777664321       


Q ss_pred             cccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCc---ccchHHHH--HHHhCCCC---CCCCCccccccHHH
Q 017977          197 LVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA---LAKMIPLF--MMFAGGPL---GSGQQWFSWIHLDD  268 (363)
Q Consensus       197 ~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~---~~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~D  268 (363)
                       ..|+.+|+..+......... .+++++++||+.+||+....   ...+++.+  ....+.++   +++++.+++++++|
T Consensus       175 -~~Y~~sK~~~e~~~~~~~~~-~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~D  252 (352)
T 1sb8_A          175 -SPYAVTKYVNELYADVFSRC-YGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIEN  252 (352)
T ss_dssp             -SHHHHHHHHHHHHHHHHHHH-HCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHH
T ss_pred             -ChhHHHHHHHHHHHHHHHHH-cCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHH
Confidence             22455554444444333322 38999999999999997532   12333332  33456554   67788899999999


Q ss_pred             HHHHHHHHhcCC-C-CCceEEeeCCCCcCHHHHHHHHHHHh---CCCCCCCCcHHHHHHHhccCceeeecCcccChhhHH
Q 017977          269 IVNLIYEALSNP-S-YRGVINGTAPNPVRLAEMCDHLGNVL---GRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAK  343 (363)
Q Consensus       269 ~a~a~~~~~~~~-~-~~g~~~i~~~~~~s~~el~~~i~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~  343 (363)
                      +|++++.++... . .+++||+++++++++.|+++.+.+.+   |.+.... |.      +............++++|++
T Consensus       253 va~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~g~~~~~~-~~------~~~~~~~~~~~~~~d~~k~~  325 (352)
T 1sb8_A          253 TVQANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHRE-PV------YRDFREGDVRHSLADISKAA  325 (352)
T ss_dssp             HHHHHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCCCCC-CE------EECCCTTCCSBCCBCCHHHH
T ss_pred             HHHHHHHHHhccccCCCceEEeCCCCCccHHHHHHHHHHHHHhcCCCCCCC-ce------ecCCCccchhhccCCHHHHH
Confidence            999999998763 2 45699999999999999999999999   8764321 11      00000001134557899996


Q ss_pred             -HcCCCcccccHHHHHHHHhC
Q 017977          344 -ELGFPFKYRYVKDALKAIMS  363 (363)
Q Consensus       344 -~lG~~p~~~~~~~~l~~~~~  363 (363)
                       +|||+|+++ ++|+|+++++
T Consensus       326 ~~lG~~p~~~-~~e~l~~~~~  345 (352)
T 1sb8_A          326 KLLGYAPKYD-VSAGVALAMP  345 (352)
T ss_dssp             HHTCCCCCCC-HHHHHHHHHH
T ss_pred             HHhCCCCCCC-HHHHHHHHHH
Confidence             499999997 9999998863

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=100.00  E-value=3.8e-38  Score=289.50  Aligned_cols=289  Identities=18%  Similarity=0.178  Sum_probs=212.2

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCCCC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPI  128 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~~~  128 (363)
                      .||+||||||+||||++|+++|+++|++|++++|+.........  ....+..+|+.|.+++.++++++|+|||+|+...
T Consensus        28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~~~  105 (379)
T 2c5a_A           28 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDM--FCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMG  105 (379)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGG--TCSEEEECCTTSHHHHHHHHTTCSEEEECCCCCC
T ss_pred             cCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhcc--CCceEEECCCCCHHHHHHHhCCCCEEEECceecC
Confidence            56899999999999999999999999999999998765432211  1112446799999999999999999999999742


Q ss_pred             CCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCC--------cccccccCCCcchhhhhhhcccc
Q 017977          129 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMR--------AAHQEMITWLSDYCAKVYCLVSF  200 (363)
Q Consensus       129 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~--------~~~~e~~~~~~~~~~~~~~~~~y  200 (363)
                      ...+.......++++|+.++.++++++.+  .++++|||+||. ++|+.        .+++|+.+....      ....|
T Consensus       106 ~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~--~~~~~~V~~SS~-~v~~~~~~~~~~~~~~~E~~~~~~~------~~~~Y  176 (379)
T 2c5a_A          106 GMGFIQSNHSVIMYNNTMISFNMIEAARI--NGIKRFFYASSA-CIYPEFKQLETTNVSLKESDAWPAE------PQDAF  176 (379)
T ss_dssp             CHHHHTTCHHHHHHHHHHHHHHHHHHHHH--TTCSEEEEEEEG-GGSCGGGSSSSSSCEECGGGGSSBC------CSSHH
T ss_pred             cccccccCHHHHHHHHHHHHHHHHHHHHH--cCCCEEEEEeeh-heeCCCCCCCccCCCcCcccCCCCC------CCChh
Confidence            21111345678899999999999999999  788899999998 88882        235565421100      01235


Q ss_pred             hhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc---cchHHHH--HHHhCCC----CCCCCCccccccHHHHHH
Q 017977          201 NRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL---AKMIPLF--MMFAGGP----LGSGQQWFSWIHLDDIVN  271 (363)
Q Consensus       201 ~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~---~~~~~~~--~~~~~~~----~~~~~~~~~~i~v~D~a~  271 (363)
                      +.+|+..+......... .+++++++||+.+||+.....   ..++..+  ....+.+    ++++.+.++++|++|+|+
T Consensus       177 ~~sK~~~E~~~~~~~~~-~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~  255 (379)
T 2c5a_A          177 GLEKLATEELCKHYNKD-FGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVE  255 (379)
T ss_dssp             HHHHHHHHHHHHHHHHH-HCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHH-HCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeEEEEEHHHHHH
Confidence            55565444444333332 389999999999999975321   1123322  3334554    267788899999999999


Q ss_pred             HHHHHhcCCCCCceEEeeCCCCcCHHHHHHHHHHHhCCCCCC-CCcHHHHHHHhccCceeeecCcccChhhHHH-cCCCc
Q 017977          272 LIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWL-PVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPF  349 (363)
Q Consensus       272 a~~~~~~~~~~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lG~~p  349 (363)
                      +++.+++++ .+++||+++++++++.|+++.+.+.+|.+..+ .+|.+.           ......++++|+++ |||+|
T Consensus       256 ai~~~l~~~-~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~~-----------~~~~~~~d~~k~~~~lG~~p  323 (379)
T 2c5a_A          256 GVLRLTKSD-FREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPGPE-----------GVRGRNSDNNLIKEKLGWAP  323 (379)
T ss_dssp             HHHHHHHSS-CCSCEEECCCCCEEHHHHHHHHHHTTTCCCCEEEECCCC-----------CCSBCEECCHHHHHHHSCCC
T ss_pred             HHHHHhhcc-CCCeEEeCCCCccCHHHHHHHHHHHhCCCCceeeCCCCC-----------CcccccCCHHHHHHHhCCCC
Confidence            999999876 46799999999999999999999999986322 222110           01234578899965 99999


Q ss_pred             ccccHHHHHHHHh
Q 017977          350 KYRYVKDALKAIM  362 (363)
Q Consensus       350 ~~~~~~~~l~~~~  362 (363)
                      +++ ++++|++++
T Consensus       324 ~~~-l~e~l~~~~  335 (379)
T 2c5a_A          324 NMR-LKEGLRITY  335 (379)
T ss_dssp             CCC-HHHHHHHHH
T ss_pred             CCC-HHHHHHHHH
Confidence            997 999999886

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=100.00  E-value=6.4e-38  Score=280.43  Aligned_cols=286  Identities=19%  Similarity=0.199  Sum_probs=207.9

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc--CCCEEEEccCCCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGTPI  128 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~Vi~~a~~~~  128 (363)
                      |+||||||+||||++|+++|+++|++|++++|..........  .......+|+.|.+++.++++  ++|+|||+|+...
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~   78 (311)
T 2p5y_A            1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENVP--KGVPFFRVDLRDKEGVERAFREFRPTHVSHQAAQAS   78 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGGGSC--TTCCEECCCTTCHHHHHHHHHHHCCSEEEECCSCCC
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchhhcc--cCeEEEECCCCCHHHHHHHHHhcCCCEEEECccccC
Confidence            589999999999999999999999999999985533221111  111245679999999998888  8999999998632


Q ss_pred             CCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCC----cccccccCCCcchhhhhhhcccchhhH
Q 017977          129 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMR----AAHQEMITWLSDYCAKVYCLVSFNRGV  204 (363)
Q Consensus       129 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~----~~~~e~~~~~~~~~~~~~~~~~y~~~k  204 (363)
                      . ..+...+...+++|+.++.++++++.+  .+++++|++||.+++||.    .+++|+.+..+.        ..|+.+|
T Consensus        79 ~-~~~~~~~~~~~~~N~~g~~~l~~a~~~--~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~--------~~Y~~sK  147 (311)
T 2p5y_A           79 V-KVSVEDPVLDFEVNLLGGLNLLEACRQ--YGVEKLVFASTGGAIYGEVPEGERAEETWPPRPK--------SPYAASK  147 (311)
T ss_dssp             H-HHHHHCHHHHHHHHTHHHHHHHHHHHH--TTCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCC--------SHHHHHH
T ss_pred             c-hhhhhCHHHHHHHHHHHHHHHHHHHHH--hCCCEEEEeCCChhhcCCCCCCCCcCCCCCCCCC--------ChHHHHH
Confidence            1 122345677899999999999999998  788899999998667763    366676553221        1244455


Q ss_pred             HHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc--cchHHHH--HHHhCCCC--------CCCCCccccccHHHHHHH
Q 017977          205 LVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL--AKMIPLF--MMFAGGPL--------GSGQQWFSWIHLDDIVNL  272 (363)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~--~~~~~~~--~~~~~~~~--------~~~~~~~~~i~v~D~a~a  272 (363)
                      ...+......... .+++++++||+++|||.....  ..+++.+  ....+.++        +++.+.++++|++|+|++
T Consensus       148 ~~~e~~~~~~~~~-~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a  226 (311)
T 2p5y_A          148 AAFEHYLSVYGQS-YGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAEA  226 (311)
T ss_dssp             HHHHHHHHHHHHH-HCCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHHHHHHH
T ss_pred             HHHHHHHHHHHHH-cCCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHHHHHHH
Confidence            4444443333222 389999999999999975321  2233332  23345442        566788999999999999


Q ss_pred             HHHHhcCCCCCceEEeeCCCCcCHHHHHHHHHHHhCCCCCC-CCcHHHHHHHhccCceeeecCcccChhhHHHcCCCccc
Q 017977          273 IYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWL-PVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKY  351 (363)
Q Consensus       273 ~~~~~~~~~~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~p~~  351 (363)
                      ++.+++++  +++||+++++++++.|+++.+.+.+|.+..+ ..|..     .++     .....++++|+++|||+|++
T Consensus       227 ~~~~~~~~--~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~-----~~~-----~~~~~~d~~k~~~lg~~p~~  294 (311)
T 2p5y_A          227 HALALFSL--EGIYNVGTGEGHTTREVLMAVAEAAGKAPEVQPAPPR-----PGD-----LERSVLSPLKLMAHGWRPKV  294 (311)
T ss_dssp             HHHHHHHC--CEEEEESCSCCEEHHHHHHHHHHHHTCCCCEEEECCC-----TTC-----CSBCCBCCHHHHTTTCCCSS
T ss_pred             HHHHHhCC--CCEEEeCCCCCccHHHHHHHHHHHhCCCCCceeCCCC-----ccc-----hhhccCCHHHHHHCCCCCCC
Confidence            99999764  6799999999999999999999999976322 11110     111     12456789999779999999


Q ss_pred             ccHHHHHHHHhC
Q 017977          352 RYVKDALKAIMS  363 (363)
Q Consensus       352 ~~~~~~l~~~~~  363 (363)
                      + ++++|+++++
T Consensus       295 ~-~~~~l~~~~~  305 (311)
T 2p5y_A          295 G-FQEGIRLTVD  305 (311)
T ss_dssp             C-HHHHHHHHHH
T ss_pred             C-HHHHHHHHHH
Confidence            6 9999998863

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=100.00  E-value=5.6e-38  Score=281.49  Aligned_cols=286  Identities=13%  Similarity=0.087  Sum_probs=207.3

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccC--CCEEEEccC
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQG--STAVVNLAG  125 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--~d~Vi~~a~  125 (363)
                      .+||+|||||||||||++|+++|+++|+      +........       ....+|+.|.+++.+++++  +|+|||+|+
T Consensus         4 ~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~~~~~~-------~~~~~D~~d~~~~~~~~~~~~~d~Vih~A~   70 (319)
T 4b8w_A            4 FQSMRILVTGGSGLVGKAIQKVVADGAG------LPGEDWVFV-------SSKDADLTDTAQTRALFEKVQPTHVIHLAA   70 (319)
T ss_dssp             CCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTCEEEEC-------CTTTCCTTSHHHHHHHHHHSCCSEEEECCC
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhcCC------ccccccccc-------CceecccCCHHHHHHHHhhcCCCEEEECce
Confidence            3568999999999999999999999998      221111111       1445899999999999987  999999999


Q ss_pred             CCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC---CcccccccCCCcchhhhhhhcccchh
Q 017977          126 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM---RAAHQEMITWLSDYCAKVYCLVSFNR  202 (363)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg---~~~~~e~~~~~~~~~~~~~~~~~y~~  202 (363)
                      ...........+...+++|+.++.+++++|.+  .+++++||+||. ++||   ..+++|+.+........   ...|+.
T Consensus        71 ~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~--~~~~~~v~~SS~-~vyg~~~~~~~~E~~~~~~~~~p~---~~~Y~~  144 (319)
T 4b8w_A           71 MVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFE--VGARKVVSCLST-CIFPDKTTYPIDETMIHNGPPHNS---NFGYSY  144 (319)
T ss_dssp             CCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHH--TTCSEEEEECCG-GGSCSSCCSSBCGGGGGBSCCCSS---SHHHHH
T ss_pred             ecccccccccCHHHHHHHHHHHHHHHHHHHHH--cCCCeEEEEcch-hhcCCCCCCCccccccccCCCCCC---cchHHH
Confidence            74322223345678899999999999999999  789999999999 8998   45778876321000000   012555


Q ss_pred             hHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCc---ccchHHHH--H----HHhCCCC---CCCCCccccccHHHHH
Q 017977          203 GVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA---LAKMIPLF--M----MFAGGPL---GSGQQWFSWIHLDDIV  270 (363)
Q Consensus       203 ~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~---~~~~~~~~--~----~~~~~~~---~~~~~~~~~i~v~D~a  270 (363)
                      +|+..+......... .+++++++||+++|||....   ...+++.+  .    ...+.++   +++++.++++|++|+|
T Consensus       145 sK~~~E~~~~~~~~~-~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva  223 (319)
T 4b8w_A          145 AKRMIDVQNRAYFQQ-YGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLA  223 (319)
T ss_dssp             HHHHHHHHHHHHHHH-HCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEEHHHHH
T ss_pred             HHHHHHHHHHHHHHh-hCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCeeEEEEeHHHHH
Confidence            565555544443333 38999999999999997632   12233332  2    3456554   7788999999999999


Q ss_pred             HHHHHHhcCCC--CCceEEeeCCCCcCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhccCceeeecCcccChhhHHH-cCC
Q 017977          271 NLIYEALSNPS--YRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGF  347 (363)
Q Consensus       271 ~a~~~~~~~~~--~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lG~  347 (363)
                      ++++.+++++.  .+++||+++++++++.|+++.+.+.+|.+..+....         ..........++++|+++ |||
T Consensus       224 ~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~---------~~~~~~~~~~~d~~k~~~~lg~  294 (319)
T 4b8w_A          224 QLFIWVLREYNEVEPIILSVGEEDEVSIKEAAEAVVEAMDFHGEVTFDT---------TKSDGQFKKTASNSKLRTYLPD  294 (319)
T ss_dssp             HHHHHHHHHCCCSSCEEECCCGGGCEEHHHHHHHHHHHTTCCSCEEEET---------TSCCCCSCCCBCCHHHHHHCTT
T ss_pred             HHHHHHHhccccCCceEEEecCCCceeHHHHHHHHHHHhCCCCcEEeCC---------CCCcCcccccCCHHHHHHhcCC
Confidence            99999998744  344999999999999999999999999874321110         001111334678999976 999


Q ss_pred             CcccccHHHHHHHHhC
Q 017977          348 PFKYRYVKDALKAIMS  363 (363)
Q Consensus       348 ~p~~~~~~~~l~~~~~  363 (363)
                      .|+++ ++++|+++++
T Consensus       295 ~p~~~-~~~~l~~~~~  309 (319)
T 4b8w_A          295 FRFTP-FKQAVKETCA  309 (319)
T ss_dssp             CCCCC-HHHHHHHHHH
T ss_pred             CCCCC-HHHHHHHHHH
Confidence            99997 9999999863

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=100.00  E-value=6.1e-38  Score=281.83  Aligned_cols=280  Identities=11%  Similarity=0.097  Sum_probs=207.8

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc--CCCEEEEccCCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGTP  127 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~Vi~~a~~~  127 (363)
                      +|+||||||+||||++|+++|+++|++|++++|+.                .+|+.|.+++.++++  ++|+|||+|+..
T Consensus         3 ~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~----------------~~D~~d~~~~~~~~~~~~~d~vih~a~~~   66 (321)
T 1e6u_A            3 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD----------------ELNLLDSRAVHDFFASERIDQVYLAAAKV   66 (321)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT----------------TCCTTCHHHHHHHHHHHCCSEEEECCCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc----------------cCCccCHHHHHHHHHhcCCCEEEEcCeec
Confidence            47999999999999999999999999999988752                268889999999998  899999999974


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC---CcccccccCCCcchhhhhhhcccchhhH
Q 017977          128 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM---RAAHQEMITWLSDYCAKVYCLVSFNRGV  204 (363)
Q Consensus       128 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg---~~~~~e~~~~~~~~~~~~~~~~~y~~~k  204 (363)
                      .........+...+++|+.++.+++++|.+  .+++++||+||. ++||   ..+++|+.+.......   ....|+.+|
T Consensus        67 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~~v~~SS~-~vyg~~~~~~~~E~~~~~~~~~p---~~~~Y~~sK  140 (321)
T 1e6u_A           67 GGIVANNTYPADFIYQNMMIESNIIHAAHQ--NDVNKLLFLGSS-CIYPKLAKQPMAESELLQGTLEP---TNEPYAIAK  140 (321)
T ss_dssp             CCHHHHHHCHHHHHHHHHHHHHHHHHHHHH--TTCCEEEEECCG-GGSCTTCCSSBCGGGTTSSCCCG---GGHHHHHHH
T ss_pred             CCcchhhhCHHHHHHHHHHHHHHHHHHHHH--hCCCeEEEEccH-HHcCCCCCCCcCccccccCCCCC---CCCccHHHH
Confidence            211122345678899999999999999999  788899999999 8898   4567776632101000   012366666


Q ss_pred             HHHHHHHHHHhccCCCceEEEEeeceEEeCCCCc---ccchHHHH--HHH----hC-CC---CCCCCCccccccHHHHHH
Q 017977          205 LVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA---LAKMIPLF--MMF----AG-GP---LGSGQQWFSWIHLDDIVN  271 (363)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~---~~~~~~~~--~~~----~~-~~---~~~~~~~~~~i~v~D~a~  271 (363)
                      +..+......... .+++++++||+.+||+....   ...+++.+  ...    .+ .+   ++++++.++++|++|+|+
T Consensus       141 ~~~E~~~~~~~~~-~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v~Dva~  219 (321)
T 1e6u_A          141 IAGIKLCESYNRQ-YGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAA  219 (321)
T ss_dssp             HHHHHHHHHHHHH-HCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHH
T ss_pred             HHHHHHHHHHHHH-hCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEHHHHHH
Confidence            5555544443322 38999999999999997642   11233322  111    23 33   267888999999999999


Q ss_pred             HHHHHhcCCCC---------CceEEeeCCCCcCHHHHHHHHHHHhCCCCCC-CCcHHHHHHHhccCceeeecCcccChhh
Q 017977          272 LIYEALSNPSY---------RGVINGTAPNPVRLAEMCDHLGNVLGRPSWL-PVPEFALKAVLGEGAFVVLEGQRVVPAR  341 (363)
Q Consensus       272 a~~~~~~~~~~---------~g~~~i~~~~~~s~~el~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k  341 (363)
                      +++.+++++..         +++||+++++++++.|+++.+.+.+|.+..+ ..|.          .........++++|
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~----------~~~~~~~~~~d~~k  289 (321)
T 1e6u_A          220 ASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDAS----------KPDGTPRKLLDVTR  289 (321)
T ss_dssp             HHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSEEEEETT----------SCCCCSBCCBCCHH
T ss_pred             HHHHHHhCcccccccccccCCceEEeCCCCCccHHHHHHHHHHHhCCCCceEeCCC----------CCCCcccccCCHHH
Confidence            99999987654         4799999999999999999999999986322 1110          00112345678999


Q ss_pred             HHHcCCCcccccHHHHHHHHhC
Q 017977          342 AKELGFPFKYRYVKDALKAIMS  363 (363)
Q Consensus       342 ~~~lG~~p~~~~~~~~l~~~~~  363 (363)
                      +++|||+|+++ ++++|+++++
T Consensus       290 ~~~lG~~p~~~-~~~~l~~~~~  310 (321)
T 1e6u_A          290 LHQLGWYHEIS-LEAGLASTYQ  310 (321)
T ss_dssp             HHHTTCCCCCC-HHHHHHHHHH
T ss_pred             HHhcCCccCCc-HHHHHHHHHH
Confidence            97799999997 9999998863

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=100.00  E-value=1.4e-37  Score=280.48  Aligned_cols=282  Identities=16%  Similarity=0.186  Sum_probs=203.5

Q ss_pred             CCCCCCCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc--CCCEE
Q 017977           43 DHTQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAV  120 (363)
Q Consensus        43 ~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~V  120 (363)
                      .++....+|+||||||+||||++|+++|+++|++|++++|+..................+|+.|.+++.++++  ++|+|
T Consensus        13 ~~~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~~~D~v   92 (330)
T 2pzm_A           13 GLVPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSFKPTHV   92 (330)
T ss_dssp             -CCSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             CCcccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhcCCCEE
Confidence            3445556689999999999999999999999999999999765433211111112245679999999999998  99999


Q ss_pred             EEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCc-----ccccccCCCcchhhhhh
Q 017977          121 VNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRA-----AHQEMITWLSDYCAKVY  195 (363)
Q Consensus       121 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~-----~~~e~~~~~~~~~~~~~  195 (363)
                      ||+|+.....  +...++  +++|+.++.++++++.+  .+++++|++||. ++|+..     +++|+..+...|     
T Consensus        93 ih~A~~~~~~--~~~~~~--~~~N~~~~~~l~~a~~~--~~~~~iV~~SS~-~~~~~~~~~~~~~~E~~~~~~~Y-----  160 (330)
T 2pzm_A           93 VHSAAAYKDP--DDWAED--AATNVQGSINVAKAASK--AGVKRLLNFQTA-LCYGRPATVPIPIDSPTAPFTSY-----  160 (330)
T ss_dssp             EECCCCCSCT--TCHHHH--HHHHTHHHHHHHHHHHH--HTCSEEEEEEEG-GGGCSCSSSSBCTTCCCCCCSHH-----
T ss_pred             EECCccCCCc--cccChh--HHHHHHHHHHHHHHHHH--cCCCEEEEecCH-HHhCCCccCCCCcCCCCCCCChH-----
Confidence            9999974321  233334  89999999999999998  788899999999 888832     666665222334     


Q ss_pred             hcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHH--HHHhCCC-CCCCCCccccccHHHHHH-
Q 017977          196 CLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGP-LGSGQQWFSWIHLDDIVN-  271 (363)
Q Consensus       196 ~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~i~v~D~a~-  271 (363)
                           +.+|+..+....   .  .+++++++||+++|||+..  ..++..+  ....+.. ++++. .+++++++|+|+ 
T Consensus       161 -----~~sK~~~e~~~~---~--~~~~~~~iR~~~v~gp~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~Dva~~  227 (330)
T 2pzm_A          161 -----GISKTAGEAFLM---M--SDVPVVSLRLANVTGPRLA--IGPIPTFYKRLKAGQKCFCSDT-VRDFLDMSDFLAI  227 (330)
T ss_dssp             -----HHHHHHHHHHHH---T--CSSCEEEEEECEEECTTCC--SSHHHHHHHHHHTTCCCCEESC-EECEEEHHHHHHH
T ss_pred             -----HHHHHHHHHHHH---H--cCCCEEEEeeeeeECcCCC--CCHHHHHHHHHHcCCEEeCCCC-EecceeHHHHHHH
Confidence                 444433332222   2  2899999999999999852  2233222  2223332 34445 789999999999 


Q ss_pred             HHHHHhcCCCCCceEEeeCCCCcCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhccCceeeecCcccChhhH-----HHcC
Q 017977          272 LIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARA-----KELG  346 (363)
Q Consensus       272 a~~~~~~~~~~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~-----~~lG  346 (363)
                      +++.+++++. +++||+++++++++.|+++.+.+.+|.+.....|.+.      +     .....++++|+     ++||
T Consensus       228 a~~~~~~~~~-g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~------~-----~~~~~~d~~k~~~~~l~~lG  295 (330)
T 2pzm_A          228 ADLSLQEGRP-TGVFNVSTGEGHSIKEVFDVVLDYVGATLAEPVPVVA------P-----GADDVPSVVLDPSKTETEFG  295 (330)
T ss_dssp             HHHHTSTTCC-CEEEEESCSCCEEHHHHHHHHHHHHTCCCSSCCCEEC------C-----CTTSCSEECBCCHHHHHHHC
T ss_pred             HHHHHhhcCC-CCEEEeCCCCCCCHHHHHHHHHHHhCCCCceeCCCCc------c-----hhhccCCHHHHhhchHHHcC
Confidence            9999998765 6799999999999999999999999987222222210      1     12334455555     7899


Q ss_pred             CCcccccHHHHHHHHh
Q 017977          347 FPFKYRYVKDALKAIM  362 (363)
Q Consensus       347 ~~p~~~~~~~~l~~~~  362 (363)
                      |+|+++ ++++|++++
T Consensus       296 ~~p~~~-~~~~l~~~~  310 (330)
T 2pzm_A          296 WKAKVD-FKDTITGQL  310 (330)
T ss_dssp             CCCCCC-HHHHHHHHH
T ss_pred             CcccCC-HHHHHHHHH
Confidence            999986 999999886

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=100.00  E-value=7.6e-38  Score=281.20  Aligned_cols=289  Identities=15%  Similarity=0.079  Sum_probs=209.3

Q ss_pred             CCCCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccC--CCEEEEc
Q 017977           46 QKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQG--STAVVNL  123 (363)
Q Consensus        46 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--~d~Vi~~  123 (363)
                      ...++|+||||||+||||++|+++|+++|++|++++|+... ..+     ...+..+|+.|.+++.+++++  +|+|||+
T Consensus         8 ~~~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~l-----~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   81 (321)
T 2pk3_A            8 HHHGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KLP-----NVEMISLDIMDSQRVKKVISDIKPDYIFHL   81 (321)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CCT-----TEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             cccCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-ccc-----eeeEEECCCCCHHHHHHHHHhcCCCEEEEc
Confidence            34456899999999999999999999999999999998765 221     122446799999999998886  8999999


Q ss_pred             cCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCC-----cccccccCCCcchhhhhhhcc
Q 017977          124 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMR-----AAHQEMITWLSDYCAKVYCLV  198 (363)
Q Consensus       124 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~-----~~~~e~~~~~~~~~~~~~~~~  198 (363)
                      |+.... ..........+++|+.++.++++++.+. .+++++||+||. ++||.     .+++|+.+..+        ..
T Consensus        82 A~~~~~-~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~~~~iv~~SS~-~v~g~~~~~~~~~~E~~~~~~--------~~  150 (321)
T 2pk3_A           82 AAKSSV-KDSWLNKKGTFSTNVFGTLHVLDAVRDS-NLDCRILTIGSS-EEYGMILPEESPVSEENQLRP--------MS  150 (321)
T ss_dssp             CSCCCH-HHHTTCHHHHHHHHHHHHHHHHHHHHHH-TCCCEEEEEEEG-GGTBSCCGGGCSBCTTSCCBC--------CS
T ss_pred             Ccccch-hhhhhcHHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEEccH-HhcCCCCCCCCCCCCCCCCCC--------CC
Confidence            997421 1122356789999999999999999762 257899999999 88872     35667655322        12


Q ss_pred             cchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHH--HHHh---C--CC---CCCCCCccccccHHH
Q 017977          199 SFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFA---G--GP---LGSGQQWFSWIHLDD  268 (363)
Q Consensus       199 ~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~--~~~~---~--~~---~~~~~~~~~~i~v~D  268 (363)
                      .|+.+|+..+......... .|++++++||+++|||..... .+++.+  ....   +  .+   ++++.+.+++++++|
T Consensus       151 ~Y~~sK~~~E~~~~~~~~~-~gi~~~ilrp~~v~g~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~D  228 (321)
T 2pk3_A          151 PYGVSKASVGMLARQYVKA-YGMDIIHTRTFNHIGPGQSLG-FVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRD  228 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHHH-HCCEEEEEEECEEECTTCCTT-SHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHH
T ss_pred             ccHHHHHHHHHHHHHHHHH-cCCCEEEEEeCcccCcCCCCC-chHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHH
Confidence            2555564444444433322 389999999999999976431 222222  2222   4  23   267778899999999


Q ss_pred             HHHHHHHHhcCCCCCceEEeeCCCCcCHHHHHHHHHHHhCCCCCC-CCcHHHHHHHhccCceeeecCcccChhhHHH-cC
Q 017977          269 IVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWL-PVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LG  346 (363)
Q Consensus       269 ~a~a~~~~~~~~~~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lG  346 (363)
                      +|++++.+++++..+++||+++++++++.|+++.+.+.+|.+..+ ..|.+        ..........++++|+++ ||
T Consensus       229 va~a~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~--------~~~~~~~~~~~d~~k~~~~lG  300 (321)
T 2pk3_A          229 IVQAYWLLSQYGKTGDVYNVCSGIGTRIQDVLDLLLAMANVKIDTELNPLQ--------LRPSEVPTLIGSNKRLKDSTG  300 (321)
T ss_dssp             HHHHHHHHHHHCCTTCEEEESCSCEEEHHHHHHHHHHHSSSCCEEEECGGG--------CCSSCCSBCCBCCHHHHHHHC
T ss_pred             HHHHHHHHHhCCCCCCeEEeCCCCCeeHHHHHHHHHHHhCCCCceeecccc--------CCCcccchhccCHHHHHHHcC
Confidence            999999999876556799999999999999999999999986322 22211        001112346678999975 89


Q ss_pred             CCcccccHHHHHHHHh
Q 017977          347 FPFKYRYVKDALKAIM  362 (363)
Q Consensus       347 ~~p~~~~~~~~l~~~~  362 (363)
                      |+|+++ ++++|++++
T Consensus       301 ~~p~~~-~~e~l~~~~  315 (321)
T 2pk3_A          301 WKPRIP-LEKSLFEIL  315 (321)
T ss_dssp             CCCCSC-HHHHHHHHH
T ss_pred             CCcCCC-HHHHHHHHH
Confidence            999996 999999886

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=100.00  E-value=1.9e-37  Score=279.75  Aligned_cols=288  Identities=17%  Similarity=0.194  Sum_probs=209.8

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc--CCCEEEEccCCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGTP  127 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~Vi~~a~~~  127 (363)
                      ||+||||||+||||++|+++|+++|++|++++|+..........  ......+|+.|.+++.++++  ++|+|||+|+..
T Consensus         1 M~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~d~vih~a~~~   78 (330)
T 2c20_A            1 MNSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAITE--GAKFYNGDLRDKAFLRDVFTQENIEAVMHFAADS   78 (330)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCT--TSEEEECCTTCHHHHHHHHHHSCEEEEEECCCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchhhcCC--CcEEEECCCCCHHHHHHHHhhcCCCEEEECCccc
Confidence            57999999999999999999999999999999976543222111  11244679999999999998  899999999974


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC---CcccccccCCCcchhhhhhhcccchhhH
Q 017977          128 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM---RAAHQEMITWLSDYCAKVYCLVSFNRGV  204 (363)
Q Consensus       128 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg---~~~~~e~~~~~~~~~~~~~~~~~y~~~k  204 (363)
                      .. ..+...++..+++|+.++.+++++|.+  .+++++||+||. ++|+   ..+++|+.+..+        ...|+.+|
T Consensus        79 ~~-~~~~~~~~~~~~~n~~~~~~l~~a~~~--~~~~~~v~~Ss~-~~~~~~~~~~~~E~~~~~~--------~~~Y~~sK  146 (330)
T 2c20_A           79 LV-GVSMEKPLQYYNNNVYGALCLLEVMDE--FKVDKFIFSSTA-ATYGEVDVDLITEETMTNP--------TNTYGETK  146 (330)
T ss_dssp             CH-HHHHHSHHHHHHHHHHHHHHHHHHHHH--TTCCEEEEECCG-GGGCSCSSSSBCTTSCCCC--------SSHHHHHH
T ss_pred             Cc-cccccCHHHHHHHHhHHHHHHHHHHHH--cCCCEEEEeCCc-eeeCCCCCCCCCcCCCCCC--------CChHHHHH
Confidence            21 112345678899999999999999999  788899999998 8898   457778776422        12255556


Q ss_pred             HHHHHHHHHHhccCCCceEEEEeeceEEeCCCC--------cccchHHHH-HHHhC--CCC---C------CCCCccccc
Q 017977          205 LVCREWEGTALKVNKDVRLALIRIGIVLGKDGG--------ALAKMIPLF-MMFAG--GPL---G------SGQQWFSWI  264 (363)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~--------~~~~~~~~~-~~~~~--~~~---~------~~~~~~~~i  264 (363)
                      +..+........ ..+++++++||+++||+...        ....+++.+ ....+  .++   +      ++++.++++
T Consensus       147 ~~~e~~~~~~~~-~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v  225 (330)
T 2c20_A          147 LAIEKMLHWYSQ-ASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYI  225 (330)
T ss_dssp             HHHHHHHHHHHH-TSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECEE
T ss_pred             HHHHHHHHHHHH-HhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEeeE
Confidence            555544444333 34899999999999999631        123344444 22222  222   2      567889999


Q ss_pred             cHHHHHHHHHHHhcCCC---CCceEEeeCCCCcCHHHHHHHHHHHhCCCCCCC-CcHHHHHHHhccCceeeecCcccChh
Q 017977          265 HLDDIVNLIYEALSNPS---YRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLP-VPEFALKAVLGEGAFVVLEGQRVVPA  340 (363)
Q Consensus       265 ~v~D~a~a~~~~~~~~~---~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  340 (363)
                      |++|+|++++.+++++.   .+++||+++++++++.|+++.+.+.+|.+..+. .|..     .++.     ....++++
T Consensus       226 ~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~-----~~~~-----~~~~~d~~  295 (330)
T 2c20_A          226 HVEDLVAAHFLGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREVTNHEIPAEVAPRR-----AGDP-----ARLVASSQ  295 (330)
T ss_dssp             EHHHHHHHHHHHHHHHHTTCCCEEEECCCTTCBCHHHHHHHHHHHTTSCCCEEEECCC-----SSCC-----SEECBCCH
T ss_pred             eHHHHHHHHHHHHhccccCCCCCeEEeCCCCCccHHHHHHHHHHHhCCCCceeeCCCC-----CCcc-----cccccCHH
Confidence            99999999999987542   256999999999999999999999999763221 1100     1111     23456789


Q ss_pred             hHH-HcCCCcccccHHHHHHHHh
Q 017977          341 RAK-ELGFPFKYRYVKDALKAIM  362 (363)
Q Consensus       341 k~~-~lG~~p~~~~~~~~l~~~~  362 (363)
                      |++ .|||+|++++++++|++++
T Consensus       296 k~~~~lG~~p~~~~l~~~l~~~~  318 (330)
T 2c20_A          296 KAKEKLGWDPRYVNVKTIIEHAW  318 (330)
T ss_dssp             HHHHHHCCCCSCCCHHHHHHHHH
T ss_pred             HHHHHhCCCCccCCHHHHHHHHH
Confidence            996 5999999944999999886

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=100.00  E-value=1.8e-37  Score=281.88  Aligned_cols=289  Identities=14%  Similarity=0.102  Sum_probs=208.5

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhC--CCEEEEEeCCCCcc--cccCCC-CCccccCcccccCcchHHhhccCCCEEEEcc
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQAD--NHQVRVLTRSRSKA--ELIFPG-KKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA  124 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~--~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a  124 (363)
                      ||+||||||+||||++|+++|+++  |++|++++|+....  ..+... .....+..+|+.|.+++.++++++|+|||+|
T Consensus         4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A   83 (348)
T 1oc2_A            4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHYA   83 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred             CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHHHHHhhcCCEEEECC
Confidence            579999999999999999999998  89999999975321  111110 0112244579999999999999999999999


Q ss_pred             CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC-C--------------cccccccCCCcc
Q 017977          125 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM-R--------------AAHQEMITWLSD  189 (363)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg-~--------------~~~~e~~~~~~~  189 (363)
                      +.... ..+....+.++++|+.++.+++++|.+  .++ ++||+||. ++|| .              .+++|+.+..+ 
T Consensus        84 ~~~~~-~~~~~~~~~~~~~Nv~g~~~l~~a~~~--~~~-~~v~~SS~-~vyg~~~~~~~~~~~~~~~~~~~~E~~~~~~-  157 (348)
T 1oc2_A           84 AESHN-DNSLNDPSPFIHTNFIGTYTLLEAARK--YDI-RFHHVSTD-EVYGDLPLREDLPGHGEGPGEKFTAETNYNP-  157 (348)
T ss_dssp             SCCCH-HHHHHCCHHHHHHHTHHHHHHHHHHHH--HTC-EEEEEEEG-GGGCCBCCGGGSTTTTCSTTSSBCTTSCCCC-
T ss_pred             cccCc-cchhhCHHHHHHHHHHHHHHHHHHHHH--hCC-eEEEeccc-ceeCCCcccccccccccccCCCcCCCCCCCC-
Confidence            97421 112234567899999999999999999  676 89999999 8888 2              45666654321 


Q ss_pred             hhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHH--HHHhCCCC---CCCCCccccc
Q 017977          190 YCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL---GSGQQWFSWI  264 (363)
Q Consensus       190 ~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~i  264 (363)
                             ...|+.+|+..+......... .+++++++||+.+||+.... ..+++.+  ....+.++   +++.+.++++
T Consensus       158 -------~~~Y~~sK~~~e~~~~~~~~~-~gi~~~ilrp~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  228 (348)
T 1oc2_A          158 -------SSPYSSTKAASDLIVKAWVRS-FGVKATISNCSNNYGPYQHI-EKFIPRQITNILAGIKPKLYGEGKNVRDWI  228 (348)
T ss_dssp             -------CSHHHHHHHHHHHHHHHHHHH-HCCEEEEEEECCEESTTCCT-TSHHHHHHHHHHHTCCCEEETTSCCEEECE
T ss_pred             -------CCccHHHHHHHHHHHHHHHHH-hCCCEEEEeeceeeCCCCCc-cchHHHHHHHHHcCCCceEecCCCceEeeE
Confidence                   122555564444444333322 38999999999999997632 1223222  33445543   6777889999


Q ss_pred             cHHHHHHHHHHHhcCCCCCceEEeeCCCCcCHHHHHHHHHHHhCCCCC-CCCcHHHHHHHhccCceeeecCcccChhhHH
Q 017977          265 HLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSW-LPVPEFALKAVLGEGAFVVLEGQRVVPARAK  343 (363)
Q Consensus       265 ~v~D~a~a~~~~~~~~~~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~  343 (363)
                      |++|+|++++.+++.+..+++||+++++++++.|+++.+.+.+|.+.. +...        .... .......++++|++
T Consensus       229 ~v~Dva~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~--------~~~~-~~~~~~~~d~~k~~  299 (348)
T 1oc2_A          229 HTNDHSTGVWAILTKGRMGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHV--------TDRA-GHDLRYAIDASKLR  299 (348)
T ss_dssp             EHHHHHHHHHHHHHHCCTTCEEEECCSCEEEHHHHHHHHHHHTTCCTTCSEEE--------CCCT-TCCCBCCBCCHHHH
T ss_pred             EHHHHHHHHHHHhhCCCCCCeEEeCCCCCCCHHHHHHHHHHHhCCCccccccC--------CCCC-CcccccccCHHHHH
Confidence            999999999999976655569999999999999999999999998632 1100        0000 00123457899996


Q ss_pred             H-cCCCcccccHHHHHHHHh
Q 017977          344 E-LGFPFKYRYVKDALKAIM  362 (363)
Q Consensus       344 ~-lG~~p~~~~~~~~l~~~~  362 (363)
                      + |||+|++++++++|++++
T Consensus       300 ~~lG~~p~~~~~~~~l~~~~  319 (348)
T 1oc2_A          300 DELGWTPQFTDFSEGLEETI  319 (348)
T ss_dssp             HHHCCCCSCCCHHHHHHHHH
T ss_pred             HHcCCCCCCCcHHHHHHHHH
Confidence            5 999999866999999876

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=100.00  E-value=3.2e-37  Score=278.90  Aligned_cols=289  Identities=16%  Similarity=0.136  Sum_probs=206.0

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCC--CEEEEEeCCCCc--ccccCCC--CCccccCcccccCcchHHhhccCCCEEEEc
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSK--AELIFPG--KKTRFFPGVMIAEEPQWRDCIQGSTAVVNL  123 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~--~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~  123 (363)
                      +|+||||||+||||++|+++|+++|  ++|++++|+...  ...+...  ........+|+.|.+++.+++.++|+|||+
T Consensus         3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~   82 (336)
T 2hun_A            3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELVRKVDGVVHL   82 (336)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHTCSEEEEC
T ss_pred             CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHHhhCCCEEEEC
Confidence            3689999999999999999999986  999999997522  2222111  111224457999999999999999999999


Q ss_pred             cCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCC-CCeEEEeccceecC---CcccccccCCCcchhhhhhhccc
Q 017977          124 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGV-RPSVLELVKPKYLM---RAAHQEMITWLSDYCAKVYCLVS  199 (363)
Q Consensus       124 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~v~~SS~~~~yg---~~~~~e~~~~~~~~~~~~~~~~~  199 (363)
                      |+... ...+....+.++++|+.++.++++++.+  .+. +++||+||. ++||   ..+++|+.+..+        ...
T Consensus        83 A~~~~-~~~~~~~~~~~~~~Nv~g~~~l~~a~~~--~~~~~~iv~~SS~-~vyg~~~~~~~~E~~~~~~--------~~~  150 (336)
T 2hun_A           83 AAESH-VDRSISSPEIFLHSNVIGTYTLLESIRR--ENPEVRFVHVSTD-EVYGDILKGSFTENDRLMP--------SSP  150 (336)
T ss_dssp             CCCCC-HHHHHHCTHHHHHHHHHHHHHHHHHHHH--HCTTSEEEEEEEG-GGGCCCSSSCBCTTBCCCC--------CSH
T ss_pred             CCCcC-hhhhhhCHHHHHHHHHHHHHHHHHHHHH--hCCCcEEEEeccH-HHHCCCCCCCcCCCCCCCC--------CCc
Confidence            99742 1112334567899999999999999998  454 689999999 8898   346777665322        122


Q ss_pred             chhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHH--HHHhCCCC---CCCCCccccccHHHHHHHHH
Q 017977          200 FNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIY  274 (363)
Q Consensus       200 y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~D~a~a~~  274 (363)
                      |+.+|...+......... .+++++++||+.+||+.... ..+++.+  ....+.++   +++.+.++++|++|+|++++
T Consensus       151 Y~~sK~~~e~~~~~~~~~-~~~~~~ilrp~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~  228 (336)
T 2hun_A          151 YSATKAASDMLVLGWTRT-YNLNASITRCTNNYGPYQFP-EKLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIE  228 (336)
T ss_dssp             HHHHHHHHHHHHHHHHHH-TTCEEEEEEECEEESTTCCT-TSHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHH-hCCCEEEEeeeeeeCcCCCc-CchHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHHHH
Confidence            555564444444433333 48999999999999997532 1233322  33444443   67778899999999999999


Q ss_pred             HHhcCCCCCceEEeeCCCCcCHHHHHHHHHHHhCCCCC-CCCcHHHHHHHhccCceeeecCcccChhhHHH-cCCCcccc
Q 017977          275 EALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSW-LPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYR  352 (363)
Q Consensus       275 ~~~~~~~~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lG~~p~~~  352 (363)
                      .++++...+++||+++++++++.|+++.+.+.+|.+.. +....    ...++     .....++++|+++ |||+|+++
T Consensus       229 ~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~----~~~~~-----~~~~~~d~~k~~~~lG~~p~~~  299 (336)
T 2hun_A          229 LVLLKGESREIYNISAGEEKTNLEVVKIILRLMGKGEELIELVE----DRPGH-----DLRYSLDSWKITRDLKWRPKYT  299 (336)
T ss_dssp             HHHHHCCTTCEEEECCSCEECHHHHHHHHHHHTTCCSTTEEEEC----CCTTC-----CCCCCBCCHHHHHHHCCCCSSC
T ss_pred             HHHhCCCCCCEEEeCCCCcccHHHHHHHHHHHhCCCcccccccC----CCCCc-----hhhhcCCHHHHHHHhCCCCCCC
Confidence            99976655669999999999999999999999998632 11000    00000     1234578999975 99999997


Q ss_pred             cHHHHHHHHh
Q 017977          353 YVKDALKAIM  362 (363)
Q Consensus       353 ~~~~~l~~~~  362 (363)
                       ++++|++++
T Consensus       300 -~~~~l~~~~  308 (336)
T 2hun_A          300 -FDEGIKKTI  308 (336)
T ss_dssp             -HHHHHHHHH
T ss_pred             -HHHHHHHHH
Confidence             999999886

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=100.00  E-value=3.7e-37  Score=278.65  Aligned_cols=288  Identities=19%  Similarity=0.184  Sum_probs=208.2

Q ss_pred             cEEEEecCcchHHHHHHHHHHhC---C---CEEEEEeCCCCc--ccccCC--CCCccccCcccccCcchHHhhccCCCEE
Q 017977           51 MTVSVTGATGFIGRRLVQRLQAD---N---HQVRVLTRSRSK--AELIFP--GKKTRFFPGVMIAEEPQWRDCIQGSTAV  120 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~---g---~~V~~~~r~~~~--~~~~~~--~~~~~~~~~~d~~~~~~~~~~~~~~d~V  120 (363)
                      |+|||||||||||++|+++|+++   |   ++|++++|+...  ...+..  ......+..+|+.|.+++.+++.++|+|
T Consensus         1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~V   80 (337)
T 1r6d_A            1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAI   80 (337)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCEE
T ss_pred             CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHHHhcCCCEE
Confidence            58999999999999999999997   8   999999997532  111111  0111224457999999999999999999


Q ss_pred             EEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC---CcccccccCCCcchhhhhhhc
Q 017977          121 VNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM---RAAHQEMITWLSDYCAKVYCL  197 (363)
Q Consensus       121 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg---~~~~~e~~~~~~~~~~~~~~~  197 (363)
                      ||+|+.... ..+...++.++++|+.++.++++++.+  .+++++||+||. ++||   ..+++|+.+..+        .
T Consensus        81 ih~A~~~~~-~~~~~~~~~~~~~Nv~~~~~l~~a~~~--~~~~~~v~~SS~-~vyg~~~~~~~~E~~~~~~--------~  148 (337)
T 1r6d_A           81 VHFAAESHV-DRSIAGASVFTETNVQGTQTLLQCAVD--AGVGRVVHVSTN-QVYGSIDSGSWTESSPLEP--------N  148 (337)
T ss_dssp             EECCSCCCH-HHHHHCCHHHHHHHTHHHHHHHHHHHH--TTCCEEEEEEEG-GGGCCCSSSCBCTTSCCCC--------C
T ss_pred             EECCCccCc-hhhhhCHHHHHHHHHHHHHHHHHHHHH--cCCCEEEEecch-HHhCCCCCCCCCCCCCCCC--------C
Confidence            999996421 112234567899999999999999999  788899999999 8898   346677655322        1


Q ss_pred             ccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHH--HHHhCCCC---CCCCCccccccHHHHHHH
Q 017977          198 VSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNL  272 (363)
Q Consensus       198 ~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~D~a~a  272 (363)
                      ..|+.+|+..+......... .+++++++||+.+||+.... ..+++.+  ....+.++   +++++.++++|++|+|++
T Consensus       149 ~~Y~~sK~~~e~~~~~~~~~-~g~~~~ilrp~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a  226 (337)
T 1r6d_A          149 SPYAASKAGSDLVARAYHRT-YGLDVRITRCCNNYGPYQHP-EKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRG  226 (337)
T ss_dssp             SHHHHHHHHHHHHHHHHHHH-HCCCEEEEEECEEECTTCCT-TSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHH-HCCCEEEEEeeeeECCCCCC-CChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHHH
Confidence            22555554444443333322 38999999999999997532 2233322  33445443   677788999999999999


Q ss_pred             HHHHhcCCCCCceEEeeCCCCcCHHHHHHHHHHHhCCCCC-CCCcHHHHHHHhccCceeeecCcccChhhHHH-cCCCcc
Q 017977          273 IYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSW-LPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFK  350 (363)
Q Consensus       273 ~~~~~~~~~~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lG~~p~  350 (363)
                      ++.+++++..+++||+++++++++.|+++.+.+.+|.+.. +..        .... ........++++|+++ |||+|+
T Consensus       227 ~~~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~--------~~~~-~~~~~~~~~d~~k~~~~lG~~p~  297 (337)
T 1r6d_A          227 IALVLAGGRAGEIYHIGGGLELTNRELTGILLDSLGADWSSVRK--------VADR-KGHDLRYSLDGGKIERELGYRPQ  297 (337)
T ss_dssp             HHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHTCCGGGEEE--------ECCC-TTCCCBCCBCCHHHHHHHCCCCC
T ss_pred             HHHHHhCCCCCCEEEeCCCCCccHHHHHHHHHHHhCCCccccee--------cCCC-CCCcceeecCHHHHHHHcCCCCC
Confidence            9999986655669999999999999999999999998621 100        0000 0001123478999965 999999


Q ss_pred             cccHHHHHHHHh
Q 017977          351 YRYVKDALKAIM  362 (363)
Q Consensus       351 ~~~~~~~l~~~~  362 (363)
                      ++ ++++|++++
T Consensus       298 ~~-~~e~l~~~~  308 (337)
T 1r6d_A          298 VS-FADGLARTV  308 (337)
T ss_dssp             SC-HHHHHHHHH
T ss_pred             CC-HHHHHHHHH
Confidence            97 999999876

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=100.00  E-value=1.3e-37  Score=283.89  Aligned_cols=293  Identities=17%  Similarity=0.152  Sum_probs=210.0

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCC---CCCccccCcccccCcchHHhhccC--CCEEEEc
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP---GKKTRFFPGVMIAEEPQWRDCIQG--STAVVNL  123 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~--~d~Vi~~  123 (363)
                      .+|+||||||+||||++|+++|+++|++|++++|+......+..   ......+..+|+.|.+++.+++++  +|+|||+
T Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   87 (357)
T 1rkx_A            8 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHM   87 (357)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhcCCCEEEEC
Confidence            34799999999999999999999999999999998765432211   011122456799999999998886  8999999


Q ss_pred             cCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCC-CCCeEEEeccceecCC----cccccccCCCcchhhhhhhcc
Q 017977          124 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEG-VRPSVLELVKPKYLMR----AAHQEMITWLSDYCAKVYCLV  198 (363)
Q Consensus       124 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~v~~SS~~~~yg~----~~~~e~~~~~~~~~~~~~~~~  198 (363)
                      |+... ...........+++|+.++.+++++|.+  .+ ++++||+||. ++||.    .+++|+.+..+        ..
T Consensus        88 A~~~~-~~~~~~~~~~~~~~n~~~~~~l~~a~~~--~~~~~~~v~~SS~-~vyg~~~~~~~~~E~~~~~~--------~~  155 (357)
T 1rkx_A           88 AAQPL-VRLSYSEPVETYSTNVMGTVYLLEAIRH--VGGVKAVVNITSD-KCYDNKEWIWGYRENEAMGG--------YD  155 (357)
T ss_dssp             CSCCC-HHHHHHCHHHHHHHHTHHHHHHHHHHHH--HCCCCEEEEECCG-GGBCCCCSSSCBCTTSCBCC--------SS
T ss_pred             CCCcc-cccchhCHHHHHHHHHHHHHHHHHHHHH--hCCCCeEEEecCH-HHhCCCCcCCCCCCCCCCCC--------CC
Confidence            99632 1122345678899999999999999998  55 7899999999 88982    25666654321        12


Q ss_pred             cchhhHHHHHHHHHHHhcc--------CCCceEEEEeeceEEeCCCCcccchHHHH--HHHhCCC--CCCCCCccccccH
Q 017977          199 SFNRGVLVCREWEGTALKV--------NKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGP--LGSGQQWFSWIHL  266 (363)
Q Consensus       199 ~y~~~k~~~~~~~~~~~~~--------~~~~~~~ilRp~~v~g~~~~~~~~~~~~~--~~~~~~~--~~~~~~~~~~i~v  266 (363)
                      .|+.+|+..+.........        ..+++++++||+.+|||+......+++.+  ....+.+  ++.+++.++++|+
T Consensus       156 ~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~v  235 (357)
T 1rkx_A          156 PYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHV  235 (357)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCEET
T ss_pred             ccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEECCCCCeeccEeH
Confidence            2455554444444333222        12899999999999999763323344433  3334554  3566788999999


Q ss_pred             HHHHHHHHHHhcC----C-CCCceEEeeCC--CCcCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhccCceeeecCcccCh
Q 017977          267 DDIVNLIYEALSN----P-SYRGVINGTAP--NPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVP  339 (363)
Q Consensus       267 ~D~a~a~~~~~~~----~-~~~g~~~i~~~--~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  339 (363)
                      +|+|++++.++.+    + ..+++||++++  +++++.|+++.+.+.+|.+..+..+... .  ..     ......+++
T Consensus       236 ~Dva~a~~~~~~~~~~~~~~~~~~~ni~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~-~--~~-----~~~~~~~d~  307 (357)
T 1rkx_A          236 LEPLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLDGNA-H--PH-----EAHYLKLDC  307 (357)
T ss_dssp             HHHHHHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC---------------CCCCCCBCC
T ss_pred             HHHHHHHHHHHHhhhhcCCCCCceEEECCCCCCcccHHHHHHHHHHHhCCCCccccCCCC-C--Cc-----CcccccCCH
Confidence            9999999998874    2 34679999974  6899999999999999987443332210 0  11     123456789


Q ss_pred             hhHHH-cCCCcccccHHHHHHHHh
Q 017977          340 ARAKE-LGFPFKYRYVKDALKAIM  362 (363)
Q Consensus       340 ~k~~~-lG~~p~~~~~~~~l~~~~  362 (363)
                      +|+++ |||+|+++ ++++|++++
T Consensus       308 ~k~~~~lG~~p~~~-l~e~l~~~~  330 (357)
T 1rkx_A          308 SKAKMQLGWHPRWN-LNTTLEYIV  330 (357)
T ss_dssp             HHHHHHHCCCCCCC-HHHHHHHHH
T ss_pred             HHHHHHhCCCcCCc-HHHHHHHHH
Confidence            99975 99999997 999999876

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=100.00  E-value=3.8e-37  Score=279.40  Aligned_cols=303  Identities=15%  Similarity=0.140  Sum_probs=211.1

Q ss_pred             cEEEEecCcchHHHHHHHHHHhC-CCEEEEEeCCCCcccccCCCCCccccCcccccCc-chHHhhccCCCEEEEccCCCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEE-PQWRDCIQGSTAVVNLAGTPI  128 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~d~Vi~~a~~~~  128 (363)
                      |+|||||||||||++|+++|+++ |++|++++|+..+...+..... ..+..+|+.|. +.+.++++++|+|||+|+...
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~D~~~~~~~~~~~~~~~d~vih~A~~~~   79 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPH-FHFVEGDISIHSEWIEYHVKKCDVVLPLVAIAT   79 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTT-EEEEECCTTTCSHHHHHHHHHCSEEEECBCCCC
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhcCCC-eEEEeccccCcHHHHHhhccCCCEEEEcccccC
Confidence            58999999999999999999998 8999999998866544332211 22445788874 568888899999999999642


Q ss_pred             CCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC---CcccccccCCCcchhhhhhhcccchhhHH
Q 017977          129 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM---RAAHQEMITWLSDYCAKVYCLVSFNRGVL  205 (363)
Q Consensus       129 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg---~~~~~e~~~~~~~~~~~~~~~~~y~~~k~  205 (363)
                      . .....+....+++|+.++.++++++.+  .+ +++||+||. ++||   ..+++|+.+...... .....+.|+.+|+
T Consensus        80 ~-~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~-~~~v~~SS~-~v~g~~~~~~~~e~~~~~~~~~-~~~~~~~Y~~sK~  153 (345)
T 2bll_A           80 P-IEYTRNPLRVFELDFEENLRIIRYCVK--YR-KRIIFPSTS-EVYGMCSDKYFDEDHSNLIVGP-VNKPRWIYSVSKQ  153 (345)
T ss_dssp             H-HHHHHSHHHHHHHHTHHHHHHHHHHHH--TT-CEEEEECCG-GGGBTCCCSSBCTTTCCCBCCC-TTCGGGHHHHHHH
T ss_pred             c-cchhcCHHHHHHHHHHHHHHHHHHHHH--hC-CeEEEEecH-HHcCCCCCCCcCCcccccccCc-ccCcccccHHHHH
Confidence            1 112235677899999999999999999  66 889999998 8898   345677654311000 0011234666675


Q ss_pred             HHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc-------cchHHHH--HHHhCCCC---CCCCCccccccHHHHHHHH
Q 017977          206 VCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL-------AKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLI  273 (363)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~-------~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~D~a~a~  273 (363)
                      ..+......... .+++++++||+.+||+.....       ...+..+  ....+.++   +++++.++++|++|+|+++
T Consensus       154 ~~e~~~~~~~~~-~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~  232 (345)
T 2bll_A          154 LLDRVIWAYGEK-EGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEAL  232 (345)
T ss_dssp             HHHHHHHHHHHH-HCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHH
T ss_pred             HHHHHHHHHHHh-cCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEHHHHHHHH
Confidence            555554443333 389999999999999975321       1223322  34455553   5677889999999999999


Q ss_pred             HHHhcCCC---CCceEEeeCCC-CcCHHHHHHHHHHHhCCCCC-CCCcHHH------HHHHhccCceeeecCcccChhhH
Q 017977          274 YEALSNPS---YRGVINGTAPN-PVRLAEMCDHLGNVLGRPSW-LPVPEFA------LKAVLGEGAFVVLEGQRVVPARA  342 (363)
Q Consensus       274 ~~~~~~~~---~~g~~~i~~~~-~~s~~el~~~i~~~~g~~~~-~~~~~~~------~~~~~~~~~~~~~~~~~~~~~k~  342 (363)
                      +.+++++.   .+++||+++++ ++++.|+++.+.+.+|.+.. +..|.+.      ....++. .........++++|+
T Consensus       233 ~~~~~~~~~~~~g~~~~i~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~k~  311 (345)
T 2bll_A          233 YRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGK-GYQDVEHRKPSIRNA  311 (345)
T ss_dssp             HHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGGSCCCCCEEEC-------------CCCCCBCCHHH
T ss_pred             HHHHhhccccCCCceEEeCCCCCCCCHHHHHHHHHHHhCCCcccccCccccccccccchhhccc-cccchhhhcccHHHH
Confidence            99998763   34599999986 89999999999999987632 2222110      0000000 000123456789999


Q ss_pred             H-HcCCCcccccHHHHHHHHhC
Q 017977          343 K-ELGFPFKYRYVKDALKAIMS  363 (363)
Q Consensus       343 ~-~lG~~p~~~~~~~~l~~~~~  363 (363)
                      + +|||+|+++ ++++|+++++
T Consensus       312 ~~~lG~~p~~~-l~~~l~~~~~  332 (345)
T 2bll_A          312 HRCLDWEPKID-MQETIDETLD  332 (345)
T ss_dssp             HHHHCCCCCCC-HHHHHHHHHH
T ss_pred             HHhcCCCcccc-HHHHHHHHHH
Confidence            6 499999997 9999999863

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=100.00  E-value=7.7e-38  Score=276.74  Aligned_cols=268  Identities=12%  Similarity=0.071  Sum_probs=203.9

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc--CCCEEEEccCCCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGTPI  128 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~Vi~~a~~~~  128 (363)
                      |+|||||||||||++|++.|+++|++|++++|.                 .+|+.|.+++.++++  ++|+|||+|+...
T Consensus         6 m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~-----------------~~D~~d~~~~~~~~~~~~~d~vi~~a~~~~   68 (287)
T 3sc6_A            6 ERVIITGANGQLGKQLQEELNPEEYDIYPFDKK-----------------LLDITNISQVQQVVQEIRPHIIIHCAAYTK   68 (287)
T ss_dssp             EEEEEESTTSHHHHHHHHHSCTTTEEEEEECTT-----------------TSCTTCHHHHHHHHHHHCCSEEEECCCCCC
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCEEEEeccc-----------------ccCCCCHHHHHHHHHhcCCCEEEECCcccC
Confidence            599999999999999999999999999999992                 268999999999988  6999999999742


Q ss_pred             CCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC---CcccccccCCCcchhhhhhhcccchhhHH
Q 017977          129 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM---RAAHQEMITWLSDYCAKVYCLVSFNRGVL  205 (363)
Q Consensus       129 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg---~~~~~e~~~~~~~~~~~~~~~~~y~~~k~  205 (363)
                      . ......+...+++|+.++.++++++.+  .++ ++||+||. ++|+   ..+++|+.+..+.        +.|+.+|+
T Consensus        69 ~-~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~-~~v~~SS~-~vy~~~~~~~~~E~~~~~p~--------~~Y~~sK~  135 (287)
T 3sc6_A           69 V-DQAEKERDLAYVINAIGARNVAVASQL--VGA-KLVYISTD-YVFQGDRPEGYDEFHNPAPI--------NIYGASKY  135 (287)
T ss_dssp             H-HHHTTCHHHHHHHHTHHHHHHHHHHHH--HTC-EEEEEEEG-GGSCCCCSSCBCTTSCCCCC--------SHHHHHHH
T ss_pred             h-HHHhcCHHHHHHHHHHHHHHHHHHHHH--cCC-eEEEEchh-hhcCCCCCCCCCCCCCCCCC--------CHHHHHHH
Confidence            2 222245788999999999999999999  677 59999999 8998   4678888765331        12444454


Q ss_pred             HHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHH--HHHhCCCC-CCCCCccccccHHHHHHHHHHHhcCCCC
Q 017977          206 VCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL-GSGQQWFSWIHLDDIVNLIYEALSNPSY  282 (363)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~i~v~D~a~a~~~~~~~~~~  282 (363)
                      ..+.....   .  +.+++++||+.+|||....   ++..+  ....+.++ ..+++.++++|++|+|++++.+++++. 
T Consensus       136 ~~E~~~~~---~--~~~~~ilR~~~v~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~-  206 (287)
T 3sc6_A          136 AGEQFVKE---L--HNKYFIVRTSWLYGKYGNN---FVKTMIRLGKEREEISVVADQIGSPTYVADLNVMINKLIHTSL-  206 (287)
T ss_dssp             HHHHHHHH---H--CSSEEEEEECSEECSSSCC---HHHHHHHHHTTCSEEEEECSCEECCEEHHHHHHHHHHHHTSCC-
T ss_pred             HHHHHHHH---h--CCCcEEEeeeeecCCCCCc---HHHHHHHHHHcCCCeEeecCcccCceEHHHHHHHHHHHHhCCC-
Confidence            33333322   1  3478999999999986532   23322  22334443 234578999999999999999999877 


Q ss_pred             CceEEeeCCCCcCHHHHHHHHHHHhCCCCC-CCCcHHHHHHHhccCceeeecCcccChhhHHHcCCCcccccHHHHHHHH
Q 017977          283 RGVINGTAPNPVRLAEMCDHLGNVLGRPSW-LPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAI  361 (363)
Q Consensus       283 ~g~~~i~~~~~~s~~el~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~p~~~~~~~~l~~~  361 (363)
                      +|+||+++++++++.|+++.+.+.+|.+.. .++|.........     ......++++|+++|||.|+++ ++++|+++
T Consensus       207 ~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~-----~~~~~~~d~~k~~~lg~~p~~~-~~~~l~~~  280 (287)
T 3sc6_A          207 YGTYHVSNTGSCSWFEFAKKIFSYANMKVNVLPVSTEEFGAAAA-----RPKYSIFQHNMLRLNGFLQMPS-WEEGLERF  280 (287)
T ss_dssp             CEEEECCCBSCEEHHHHHHHHHHHHTCCCEEEEECHHHHCCSSC-----CCSBCCBCCHHHHHTTCCCCCB-HHHHHHHH
T ss_pred             CCeEEEcCCCcccHHHHHHHHHHHcCCCcceeeeehhhcCcccC-----CCCcccccHHHHHhhCCCCCcc-HHHHHHHH
Confidence            789999999999999999999999998733 2344433211111     1133557899999999999997 99999998


Q ss_pred             hC
Q 017977          362 MS  363 (363)
Q Consensus       362 ~~  363 (363)
                      ++
T Consensus       281 ~~  282 (287)
T 3sc6_A          281 FI  282 (287)
T ss_dssp             HH
T ss_pred             HH
Confidence            63

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=100.00  E-value=3e-37  Score=278.94  Aligned_cols=296  Identities=13%  Similarity=0.060  Sum_probs=209.7

Q ss_pred             CCCCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCccc--cc--CCCCCccccCcccccCcchHHhhccC--CCE
Q 017977           46 QKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE--LI--FPGKKTRFFPGVMIAEEPQWRDCIQG--STA  119 (363)
Q Consensus        46 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~--~~~~~~~~~~~~d~~~~~~~~~~~~~--~d~  119 (363)
                      ...++|+||||||+||||++|+++|+++|++|++++|+.....  .+  ........+..+|+.|.+++.+++++  +|+
T Consensus        10 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~   89 (335)
T 1rpn_A           10 HGSMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQE   89 (335)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             ccccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHcCCCE
Confidence            3445679999999999999999999999999999999876421  00  00011112445799999999998885  699


Q ss_pred             EEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCC-CCeEEEeccceecC---CcccccccCCCcchhhhhh
Q 017977          120 VVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGV-RPSVLELVKPKYLM---RAAHQEMITWLSDYCAKVY  195 (363)
Q Consensus       120 Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~v~~SS~~~~yg---~~~~~e~~~~~~~~~~~~~  195 (363)
                      |||+|+.... ......+...+++|+.++.++++++.+  .++ +++||+||. ++||   ..+++|+.+..+.      
T Consensus        90 Vih~A~~~~~-~~~~~~~~~~~~~n~~~~~~l~~a~~~--~~~~~~~v~~SS~-~v~g~~~~~~~~E~~~~~p~------  159 (335)
T 1rpn_A           90 VYNLAAQSFV-GASWNQPVTTGVVDGLGVTHLLEAIRQ--FSPETRFYQASTS-EMFGLIQAERQDENTPFYPR------  159 (335)
T ss_dssp             EEECCSCCCH-HHHTTSHHHHHHHHTHHHHHHHHHHHH--HCTTSEEEEEEEG-GGGCSCSSSSBCTTSCCCCC------
T ss_pred             EEECccccch-hhhhhChHHHHHHHHHHHHHHHHHHHH--hCCCCeEEEEeCH-HHhCCCCCCCCCcccCCCCC------
Confidence            9999996421 111334678899999999999999998  675 889999998 8898   3467777664321      


Q ss_pred             hcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCc--ccchHHH-H-HHHhCCC----CCCCCCccccccHH
Q 017977          196 CLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA--LAKMIPL-F-MMFAGGP----LGSGQQWFSWIHLD  267 (363)
Q Consensus       196 ~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~--~~~~~~~-~-~~~~~~~----~~~~~~~~~~i~v~  267 (363)
                        +.|+.+|+..+......... .+++++++||+++|||+...  ....+.. + ....+..    ++++++.++++|++
T Consensus       160 --~~Y~~sK~~~e~~~~~~~~~-~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~  236 (335)
T 1rpn_A          160 --SPYGVAKLYGHWITVNYRES-FGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAG  236 (335)
T ss_dssp             --SHHHHHHHHHHHHHHHHHHH-HCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHH
T ss_pred             --ChhHHHHHHHHHHHHHHHHH-cCCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEHH
Confidence              22555565444444433322 38999999999999997532  1122222 2 3344542    26778899999999


Q ss_pred             HHHHHHHHHhcCCCCCceEEeeCCCCcCHHHHHHHHHHHhCCCCC--CCCcHHHHHHHhccCceeeecCcccChhhHHH-
Q 017977          268 DIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSW--LPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-  344 (363)
Q Consensus       268 D~a~a~~~~~~~~~~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-  344 (363)
                      |+|++++.+++++. .++||+++++++++.|+++.+.+.+|.+..  ++.+..    ..   .........++++|+++ 
T Consensus       237 Dva~a~~~~~~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~----~~---~~~~~~~~~~d~~k~~~~  308 (335)
T 1rpn_A          237 DYVEAMWLMLQQDK-ADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPA----FF---RPAEVDVLLGNPAKAQRV  308 (335)
T ss_dssp             HHHHHHHHHHHSSS-CCCEEECCSCEEEHHHHHHHHHHTTTCCGGGTEEECGG----GC---CSSCCCBCCBCTHHHHHH
T ss_pred             HHHHHHHHHHhcCC-CCEEEEeCCCCccHHHHHHHHHHHhCCCcccccccccc----cc---CCCcchhhcCCHHHHHHh
Confidence            99999999998765 589999999999999999999999998621  111110    00   00111234568999964 


Q ss_pred             cCCCcccccHHHHHHHHhC
Q 017977          345 LGFPFKYRYVKDALKAIMS  363 (363)
Q Consensus       345 lG~~p~~~~~~~~l~~~~~  363 (363)
                      |||+|+++ ++++|+++++
T Consensus       309 lG~~p~~~-l~e~l~~~~~  326 (335)
T 1rpn_A          309 LGWKPRTS-LDELIRMMVE  326 (335)
T ss_dssp             HCCCCCSC-HHHHHHHHHH
T ss_pred             cCCCcCCC-HHHHHHHHHH
Confidence            99999996 9999998863

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=100.00  E-value=1.8e-36  Score=276.22  Aligned_cols=285  Identities=13%  Similarity=0.121  Sum_probs=210.3

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCC-CEEEEEeCCCCcccc-cCCCCCccccCcccccCcchHHhhcc-----CCCEEE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAEL-IFPGKKTRFFPGVMIAEEPQWRDCIQ-----GSTAVV  121 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~-~~~~~~~~~~~~~d~~~~~~~~~~~~-----~~d~Vi  121 (363)
                      .+|+|||||||||||++|+++|+++| ++|++++|+...... .....    ...+|+.|.+.+..+++     ++|+||
T Consensus        45 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~----~~~~d~~~~~~~~~~~~~~~~~~~d~Vi  120 (357)
T 2x6t_A           45 EGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDL----NIADYMDKEDFLIQIMAGEEFGDVEAIF  120 (357)
T ss_dssp             ---CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGGGGGTTTS----CCSEEEEHHHHHHHHHTTCCCSSCCEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcchhhcccCc----eEeeecCcHHHHHHHHhhcccCCCCEEE
Confidence            34789999999999999999999999 999999998755311 11111    14578888888888887     599999


Q ss_pred             EccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC---CcccccccCCCcchhhhhhhcc
Q 017977          122 NLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM---RAAHQEMITWLSDYCAKVYCLV  198 (363)
Q Consensus       122 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg---~~~~~e~~~~~~~~~~~~~~~~  198 (363)
                      |+|+....   .....+.++++|+.++.++++++.+  .++ ++||+||. ++||   ..+++|+.+..+        ..
T Consensus       121 h~A~~~~~---~~~~~~~~~~~n~~~~~~ll~a~~~--~~~-r~V~~SS~-~v~g~~~~~~~~E~~~~~p--------~~  185 (357)
T 2x6t_A          121 HEGACSST---TEWDGKYMMDNNYQYSKELLHYCLE--REI-PFLYASSA-ATYGGRTSDFIESREYEKP--------LN  185 (357)
T ss_dssp             ECCSCCCT---TCCCHHHHHHHTHHHHHHHHHHHHH--HTC-CEEEEEEG-GGGCSCSSCCCSSGGGCCC--------SS
T ss_pred             ECCcccCC---ccCCHHHHHHHHHHHHHHHHHHHHH--cCC-eEEEEcch-HHhCCCCCCCcCCcCCCCC--------CC
Confidence            99997432   3345678999999999999999998  677 89999999 8898   336777765432        12


Q ss_pred             cchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCc---ccchHHHH--HHHhCCCC---CCCCC-ccccccHHHH
Q 017977          199 SFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA---LAKMIPLF--MMFAGGPL---GSGQQ-WFSWIHLDDI  269 (363)
Q Consensus       199 ~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~---~~~~~~~~--~~~~~~~~---~~~~~-~~~~i~v~D~  269 (363)
                      .|+.+|+..+......... .+++++++||+.+|||....   ...++..+  ....+.++   +++.+ .+++++++|+
T Consensus       186 ~Y~~sK~~~E~~~~~~~~~-~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv  264 (357)
T 2x6t_A          186 VFGYSKFLFDEYVRQILPE-ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDV  264 (357)
T ss_dssp             HHHHHHHHHHHHHHHHGGG-CSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEEHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHH-cCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEccEEHHHH
Confidence            3555665555554444333 48999999999999997532   12333333  33445443   56677 8899999999


Q ss_pred             HHHHHHHhcCCCCCceEEeeCCCCcCHHHHHHHHHHHhCCC--CCCCCcHHHHHHHhccCceeeecCcccChhhHHHcCC
Q 017977          270 VNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRP--SWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGF  347 (363)
Q Consensus       270 a~a~~~~~~~~~~~g~~~i~~~~~~s~~el~~~i~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~  347 (363)
                      |++++.+++++. +++||+++++++++.|+++.+.+.+|.+  ...+.|.+.        ..........+++|+++|||
T Consensus       265 a~ai~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~--------~~~~~~~~~~~~~k~~~lG~  335 (357)
T 2x6t_A          265 ADVNLWFLENGV-SGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKL--------KGRYQAFTQADLTNLRAAGY  335 (357)
T ss_dssp             HHHHHHHHHHCC-CEEEEESCSCCEEHHHHHHHHHHHHTCCCCEEECCCGGG--------TTSCCSBCCCCCHHHHHTTC
T ss_pred             HHHHHHHHhcCC-CCeEEecCCCcccHHHHHHHHHHHcCCCCceecCCCccc--------ccccccccccCHHHHHHcCC
Confidence            999999998776 7799999999999999999999999986  122444321        01112345567899988999


Q ss_pred             -CcccccHHHHHHHHhC
Q 017977          348 -PFKYRYVKDALKAIMS  363 (363)
Q Consensus       348 -~p~~~~~~~~l~~~~~  363 (363)
                       .|.++ ++++|+++++
T Consensus       336 ~~~~~~-l~e~l~~~~~  351 (357)
T 2x6t_A          336 DKPFKT-VAEGVTEYMA  351 (357)
T ss_dssp             CCCCCC-HHHHHHHHHH
T ss_pred             CCCCCC-HHHHHHHHHH
Confidence             78776 9999998863

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=100.00  E-value=4.1e-37  Score=278.96  Aligned_cols=294  Identities=16%  Similarity=0.160  Sum_probs=200.6

Q ss_pred             CCCCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           46 QKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        46 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      ....+|+|||||||||||++|+++|+++|++|++++|+............  ...++++...|.....+.++|+|||+|+
T Consensus        23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~d~vih~A~  100 (343)
T 2b69_A           23 MEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWI--GHENFELINHDVVEPLYIEVDQIYHLAS  100 (343)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGT--TCTTEEEEECCTTSCCCCCCSEEEECCS
T ss_pred             cccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhc--cCCceEEEeCccCChhhcCCCEEEECcc
Confidence            44456899999999999999999999999999999997543221110000  0112333333333334678999999999


Q ss_pred             CCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC---CcccccccCCC-cchhhhhhhcccch
Q 017977          126 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM---RAAHQEMITWL-SDYCAKVYCLVSFN  201 (363)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg---~~~~~e~~~~~-~~~~~~~~~~~~y~  201 (363)
                      ..... ....++...+++|+.++.+++++|.+  .++ ++||+||. ++||   ..+++|+.+.. .+..    ....|+
T Consensus       101 ~~~~~-~~~~~~~~~~~~n~~~~~~l~~a~~~--~~~-~~v~~SS~-~v~g~~~~~~~~E~~~~~~~~~~----~~~~Y~  171 (343)
T 2b69_A          101 PASPP-NYMYNPIKTLKTNTIGTLNMLGLAKR--VGA-RLLLASTS-EVYGDPEVHPQSEDYWGHVNPIG----PRACYD  171 (343)
T ss_dssp             CCSHH-HHTTCHHHHHHHHHHHHHHHHHHHHH--HTC-EEEEEEEG-GGGBSCSSSSBCTTCCCBCCSSS----TTHHHH
T ss_pred             ccCch-hhhhCHHHHHHHHHHHHHHHHHHHHH--hCC-cEEEECcH-HHhCCCCCCCCcccccccCCCCC----CCCchH
Confidence            64221 11234567899999999999999998  665 79999998 8898   34666664211 0000    112356


Q ss_pred             hhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc-cchHHHH--HHHhCCCC---CCCCCccccccHHHHHHHHHH
Q 017977          202 RGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL-AKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIYE  275 (363)
Q Consensus       202 ~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~-~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~D~a~a~~~  275 (363)
                      .+|+..+......... .+++++++||+.+||+..... ..++..+  ....+.++   +++++.+++++++|+|++++.
T Consensus       172 ~sK~~~E~~~~~~~~~-~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~  250 (343)
T 2b69_A          172 EGKRVAETMCYAYMKQ-EGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVA  250 (343)
T ss_dssp             HHHHHHHHHHHHHHHH-HCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHH-hCCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHHHHH
Confidence            6665555544433332 389999999999999965321 2233322  33455553   677888999999999999999


Q ss_pred             HhcCCCCCceEEeeCCCCcCHHHHHHHHHHHhCCCCCC-CCcHHHHHHHhccCceeeecCcccChhhHH-HcCCCccccc
Q 017977          276 ALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWL-PVPEFALKAVLGEGAFVVLEGQRVVPARAK-ELGFPFKYRY  353 (363)
Q Consensus       276 ~~~~~~~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~lG~~p~~~~  353 (363)
                      +++.+. +++||+++++++++.|+++.+.+.+|.+..+ ..|...     .+     ......+++|++ .|||+|+++ 
T Consensus       251 ~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~~-----~~-----~~~~~~d~~k~~~~lG~~p~~~-  318 (343)
T 2b69_A          251 LMNSNV-SSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQ-----DD-----PQKRKPDIKKAKLMLGWEPVVP-  318 (343)
T ss_dssp             HHTSSC-CSCEEESCCCEEEHHHHHHHHHHHHTCCCCEEEECCCT-----TC-----CCCCCBCCHHHHHHHCCCCCSC-
T ss_pred             HHhcCC-CCeEEecCCCCCcHHHHHHHHHHHhCCCCCceeCCCCC-----CC-----CceecCCHHHHHHHcCCCCCCC-
Confidence            997653 6799999999999999999999999986322 112110     00     123556889996 599999987 


Q ss_pred             HHHHHHHHhC
Q 017977          354 VKDALKAIMS  363 (363)
Q Consensus       354 ~~~~l~~~~~  363 (363)
                      ++|+|+++++
T Consensus       319 l~e~l~~~~~  328 (343)
T 2b69_A          319 LEEGLNKAIH  328 (343)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999998863

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=100.00  E-value=1.5e-36  Score=274.15  Aligned_cols=283  Identities=14%  Similarity=0.088  Sum_probs=202.4

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccC--CCEEEEccC
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQG--STAVVNLAG  125 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--~d~Vi~~a~  125 (363)
                      ..||+||||||+||||++|+++|+++|++|++++|+..................+|+.|.+++.+++++  +|+|||+|+
T Consensus        19 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih~A~   98 (333)
T 2q1w_A           19 SHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGDLQPDAVVHTAA   98 (333)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhccCCcEEEECce
Confidence            456899999999999999999999999999999998654322221111122456799999999999988  999999999


Q ss_pred             CCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC----Cc--ccccccCCC-cchhhhhhhcc
Q 017977          126 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM----RA--AHQEMITWL-SDYCAKVYCLV  198 (363)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg----~~--~~~e~~~~~-~~~~~~~~~~~  198 (363)
                      .....  ...+++  +++|+.++.++++++.+  .+++++|++||. ++|+    ..  +++|+..+. ..         
T Consensus        99 ~~~~~--~~~~~~--~~~N~~~~~~l~~a~~~--~~~~~iV~~SS~-~~~g~~~~~~~~~~~E~~~p~~~~---------  162 (333)
T 2q1w_A           99 SYKDP--DDWYND--TLTNCVGGSNVVQAAKK--NNVGRFVYFQTA-LCYGVKPIQQPVRLDHPRNPANSS---------  162 (333)
T ss_dssp             CCSCT--TCHHHH--HHHHTHHHHHHHHHHHH--TTCSEEEEEEEG-GGGCSCCCSSSBCTTSCCCCTTCH---------
T ss_pred             ecCCC--ccCChH--HHHHHHHHHHHHHHHHH--hCCCEEEEECcH-HHhCCCcccCCCCcCCCCCCCCCc---------
Confidence            74321  233333  89999999999999999  788899999998 7886    21  455554222 23         


Q ss_pred             cchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHH--HHHhCCCC-CCCCCccccccHHHHHHHHHH
Q 017977          199 SFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL-GSGQQWFSWIHLDDIVNLIYE  275 (363)
Q Consensus       199 ~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~i~v~D~a~a~~~  275 (363)
                       |+.+|+..+......+    . +++++||+++|||...  ..+++.+  ....+..+ + +.+.+++++++|+|++++.
T Consensus       163 -Y~~sK~~~E~~~~~s~----~-~~~ilR~~~v~gp~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~i~v~Dva~ai~~  233 (333)
T 2q1w_A          163 -YAISKSANEDYLEYSG----L-DFVTFRLANVVGPRNV--SGPLPIFFQRLSEGKKCFV-TKARRDFVFVKDLARATVR  233 (333)
T ss_dssp             -HHHHHHHHHHHHHHHT----C-CEEEEEESEEESTTCC--SSHHHHHHHHHHTTCCCEE-EECEECEEEHHHHHHHHHH
T ss_pred             -hHHHHHHHHHHHHhhh----C-CeEEEeeceEECcCCc--CcHHHHHHHHHHcCCeeeC-CCceEeeEEHHHHHHHHHH
Confidence             4444543333332201    1 8999999999999832  2233322  22333333 4 5677899999999999999


Q ss_pred             HhcCCCCCceEEeeCCCCcCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhccCceeeecCcccChhhHHHcCCCcccccHH
Q 017977          276 ALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVK  355 (363)
Q Consensus       276 ~~~~~~~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~p~~~~~~  355 (363)
                      +++++. +++||+++++++++.|+++.+.+.+|.+.....|...      +..........++++|++++||+|+++ ++
T Consensus       234 ~~~~~~-g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~------~~~~~~~~~~~~d~~k~~~~G~~p~~~-~~  305 (333)
T 2q1w_A          234 AVDGVG-HGAYHFSSGTDVAIKELYDAVVEAMALPSYPEPEIRE------LGPDDAPSILLDPSRTIQDFGKIEFTP-LK  305 (333)
T ss_dssp             HHTTCC-CEEEECSCSCCEEHHHHHHHHHHHTTCSSCCCCEEEE------CCTTSCCCCCBCCHHHHHHHCCCCCCC-HH
T ss_pred             HHhcCC-CCEEEeCCCCCccHHHHHHHHHHHhCCCCceeCCCCC------cccccccccccCCHHHHHhcCCCcCCC-HH
Confidence            998776 6799999999999999999999999986111222110      111112245677899997669999997 99


Q ss_pred             HHHHHHhC
Q 017977          356 DALKAIMS  363 (363)
Q Consensus       356 ~~l~~~~~  363 (363)
                      ++|+++++
T Consensus       306 ~~l~~~~~  313 (333)
T 2q1w_A          306 ETVAAAVA  313 (333)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99998763

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=100.00  E-value=1.6e-36  Score=271.20  Aligned_cols=281  Identities=12%  Similarity=0.120  Sum_probs=195.1

Q ss_pred             EEEEecCcchHHHHHHHHHHhCC-CEEEEEeCCCCccc--ccCCCCCccccCcccccCcchHHhhccC-----CCEEEEc
Q 017977           52 TVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAE--LIFPGKKTRFFPGVMIAEEPQWRDCIQG-----STAVVNL  123 (363)
Q Consensus        52 ~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~--~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~d~Vi~~  123 (363)
                      +|||||||||||++|+++|+++| ++|++++|+.....  .+...     ...+|+.+.+.+..++++     +|+|||+
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~-----~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~   75 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDL-----NIADYMDKEDFLIQIMAGEEFGDVEAIFHE   75 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHHTS-----CCSEEEEHHHHHHHHHTTCCCSSCCEEEEC
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCchhhhcCcc-----eeccccccHHHHHHHHhccccCCCcEEEEC
Confidence            58999999999999999999999 99999999875431  11110     134788888888888875     9999999


Q ss_pred             cCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC---CcccccccCCCcchhhhhhhcccc
Q 017977          124 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM---RAAHQEMITWLSDYCAKVYCLVSF  200 (363)
Q Consensus       124 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg---~~~~~e~~~~~~~~~~~~~~~~~y  200 (363)
                      |+....   .....+.++++|+.++.++++++.+  .++ ++||+||. ++||   ..+++|+.+..+.        ..|
T Consensus        76 a~~~~~---~~~~~~~~~~~n~~~~~~l~~a~~~--~~~-~~v~~SS~-~v~g~~~~~~~~E~~~~~p~--------~~Y  140 (310)
T 1eq2_A           76 GACSST---TEWDGKYMMDNNYQYSKELLHYCLE--REI-PFLYASSA-ATYGGRTSDFIESREYEKPL--------NVY  140 (310)
T ss_dssp             CSCCCT---TCCCHHHHHHHTHHHHHHHHHHHHH--HTC-CEEEEEEG-GGGTTCCSCBCSSGGGCCCS--------SHH
T ss_pred             cccccC---cccCHHHHHHHHHHHHHHHHHHHHH--cCC-eEEEEeeH-HHhCCCCCCCCCCCCCCCCC--------Chh
Confidence            997432   3345678999999999999999999  678 89999999 8898   3366776654321        225


Q ss_pred             hhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCc---ccchHHHH--HHHhCCCC---CCCCC-ccccccHHHHHH
Q 017977          201 NRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA---LAKMIPLF--MMFAGGPL---GSGQQ-WFSWIHLDDIVN  271 (363)
Q Consensus       201 ~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~---~~~~~~~~--~~~~~~~~---~~~~~-~~~~i~v~D~a~  271 (363)
                      +.+|+..+........ ..+++++++||+.+||+....   ...++..+  ....+.++   +++.+ .++++|++|+|+
T Consensus       141 ~~sK~~~e~~~~~~~~-~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~  219 (310)
T 1eq2_A          141 GYSKFLFDEYVRQILP-EANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVAD  219 (310)
T ss_dssp             HHHHHHHHHHHHHHGG-GCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHH
T ss_pred             HHHHHHHHHHHHHHHH-HcCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHHH
Confidence            5556555555444433 348999999999999997542   12333333  23344442   56777 899999999999


Q ss_pred             HHHHHhcCCCCCceEEeeCCCCcCHHHHHHHHHHHhCCC--CCCCCcHHHHHHHhccCceeeecCcccChhhHHHcCC-C
Q 017977          272 LIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRP--SWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGF-P  348 (363)
Q Consensus       272 a~~~~~~~~~~~g~~~i~~~~~~s~~el~~~i~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~-~  348 (363)
                      +++.+++++. +++||+++++++++.|+++.+.+.+|.+  ...+.|.+..        .........+++|+++||| .
T Consensus       220 ~~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~lG~~~  290 (310)
T 1eq2_A          220 VNLWFLENGV-SGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLK--------GRYQAFTQADLTNLRAAGYDK  290 (310)
T ss_dssp             HHHHHHHHCC-CEEEEESCSCCBCHHHHHHHC-----------------------------CCCSCCBCCHHHHHTTCCC
T ss_pred             HHHHHHhcCC-CCeEEEeCCCccCHHHHHHHHHHHcCCCCceeCCCChhhh--------cccccccccchHHHHhcCCCC
Confidence            9999998776 7799999999999999999999999976  1223333210        1112345677899988999 7


Q ss_pred             cccccHHHHHHHHhC
Q 017977          349 FKYRYVKDALKAIMS  363 (363)
Q Consensus       349 p~~~~~~~~l~~~~~  363 (363)
                      |.++ ++++|+++++
T Consensus       291 ~~~~-l~~~l~~~~~  304 (310)
T 1eq2_A          291 PFKT-VAEGVTEYMA  304 (310)
T ss_dssp             CCCC-HHHHHHHHHH
T ss_pred             CCCC-HHHHHHHHHH
Confidence            8776 9999998863

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=100.00  E-value=4e-37  Score=279.61  Aligned_cols=291  Identities=16%  Similarity=0.150  Sum_probs=208.3

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCc------ccc----cCC-CCCccccCcccccCcchHHhhcc--C
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK------AEL----IFP-GKKTRFFPGVMIAEEPQWRDCIQ--G  116 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~------~~~----~~~-~~~~~~~~~~d~~~~~~~~~~~~--~  116 (363)
                      +|+||||||+||||++|+++|+++|++|++++|+...      ...    +.. ......+..+|+.|.+++.++++  +
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   81 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYS   81 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhcC
Confidence            4799999999999999999999999999999986543      110    000 00111245679999999999888  8


Q ss_pred             CCEEEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC---CcccccccCCCcchhhh
Q 017977          117 STAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM---RAAHQEMITWLSDYCAK  193 (363)
Q Consensus       117 ~d~Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg---~~~~~e~~~~~~~~~~~  193 (363)
                      +|+|||+|+.... ......+...+++|+.++.++++++.+  .+++++||+||. ++||   ..+++|+.+..+.    
T Consensus        82 ~d~vih~A~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~iv~~SS~-~~~g~~~~~~~~E~~~~~p~----  153 (348)
T 1ek6_A           82 FMAVIHFAGLKAV-GESVQKPLDYYRVNLTGTIQLLEIMKA--HGVKNLVFSSSA-TVYGNPQYLPLDEAHPTGGC----  153 (348)
T ss_dssp             EEEEEECCSCCCH-HHHHHCHHHHHHHHHHHHHHHHHHHHH--TTCCEEEEEEEG-GGGCSCSSSSBCTTSCCCCC----
T ss_pred             CCEEEECCCCcCc-cchhhchHHHHHHHHHHHHHHHHHHHH--hCCCEEEEECcH-HHhCCCCCCCcCCCCCCCCC----
Confidence            9999999996321 112345678899999999999999999  788899999998 8898   4577777664320    


Q ss_pred             hhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCC------Cc---ccchHHHH-HHH--hCCCC---C---
Q 017977          194 VYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDG------GA---LAKMIPLF-MMF--AGGPL---G---  255 (363)
Q Consensus       194 ~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~------~~---~~~~~~~~-~~~--~~~~~---~---  255 (363)
                         ...|+.+|+..+...........+++++++||+++||+..      ..   ...+++.+ ...  .+.++   +   
T Consensus       154 ---~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  230 (348)
T 1ek6_A          154 ---TNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDY  230 (348)
T ss_dssp             ---SSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCS
T ss_pred             ---CCchHHHHHHHHHHHHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCcc
Confidence               1225555655555444433332259999999999999952      10   12344433 222  23322   2   


Q ss_pred             ---CCCCccccccHHHHHHHHHHHhcCC--CCC-ceEEeeCCCCcCHHHHHHHHHHHhCCCCCC-CCcHHHHHHHhccCc
Q 017977          256 ---SGQQWFSWIHLDDIVNLIYEALSNP--SYR-GVINGTAPNPVRLAEMCDHLGNVLGRPSWL-PVPEFALKAVLGEGA  328 (363)
Q Consensus       256 ---~~~~~~~~i~v~D~a~a~~~~~~~~--~~~-g~~~i~~~~~~s~~el~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~  328 (363)
                         ++++.++++|++|+|++++.+++++  ..+ ++||+++++++++.|+++.+.+.+|.+..+ ..|..     .++. 
T Consensus       231 ~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~-----~~~~-  304 (348)
T 1ek6_A          231 DTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVARR-----EGDV-  304 (348)
T ss_dssp             SSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCCCEEEECCC-----TTCC-
T ss_pred             cCCCCceEEeeEEHHHHHHHHHHHHhcccccCCceEEEeCCCCCccHHHHHHHHHHHhCCCCceeeCCCC-----Cccc-
Confidence               5678899999999999999999764  233 599999999999999999999999976321 11100     1111 


Q ss_pred             eeeecCcccChhhHH-HcCCCcccccHHHHHHHHh
Q 017977          329 FVVLEGQRVVPARAK-ELGFPFKYRYVKDALKAIM  362 (363)
Q Consensus       329 ~~~~~~~~~~~~k~~-~lG~~p~~~~~~~~l~~~~  362 (363)
                          ....++++|++ .|||+|+++ ++++|++++
T Consensus       305 ----~~~~~d~~k~~~~lG~~p~~~-l~~~l~~~~  334 (348)
T 1ek6_A          305 ----AACYANPSLAQEELGWTAALG-LDRMCEDLW  334 (348)
T ss_dssp             ----SEECBCCHHHHHTTCCCCCCC-HHHHHHHHH
T ss_pred             ----hhhccCHHHHHHhcCCCCCCC-HHHHHHHHH
Confidence                23456799996 599999997 999999886

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=100.00  E-value=2.3e-37  Score=276.92  Aligned_cols=287  Identities=12%  Similarity=0.125  Sum_probs=205.9

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhC--CCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc--CCCEEEEccC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQAD--NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAG  125 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~Vi~~a~  125 (363)
                      +|+|||||||||||++|+++|+++  |++|++++|+....... ..   ..+..+|+.|.+++.++++  ++|+|||+|+
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~-~~---~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~   77 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTDVV-NS---GPFEVVNALDFNQIEHLVEVHKITDIYLMAA   77 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCHHH-HS---SCEEECCTTCHHHHHHHHHHTTCCEEEECCC
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccccc-CC---CceEEecCCCHHHHHHHHhhcCCCEEEECCc
Confidence            368999999999999999999998  89999999987653211 11   1145679999999999998  8999999999


Q ss_pred             CCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCC----cccccccCCCcchhhhhhhcccch
Q 017977          126 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMR----AAHQEMITWLSDYCAKVYCLVSFN  201 (363)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~----~~~~e~~~~~~~~~~~~~~~~~y~  201 (363)
                      ....  .....+...+++|+.++.++++++.+  .+++++||+||. ++|+.    .+.+|+.+..+        ...|+
T Consensus        78 ~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~~v~~SS~-~~~~~~~~~~~~~e~~~~~~--------~~~Y~  144 (312)
T 2yy7_A           78 LLSA--TAEKNPAFAWDLNMNSLFHVLNLAKA--KKIKKIFWPSSI-AVFGPTTPKENTPQYTIMEP--------STVYG  144 (312)
T ss_dssp             CCHH--HHHHCHHHHHHHHHHHHHHHHHHHHT--TSCSEEECCEEG-GGCCTTSCSSSBCSSCBCCC--------CSHHH
T ss_pred             cCCC--chhhChHHHHHHHHHHHHHHHHHHHH--cCCCEEEEeccH-HHhCCCCCCCCccccCcCCC--------CchhH
Confidence            6321  12345678899999999999999999  788899999999 88882    34556554322        12245


Q ss_pred             hhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCc----ccchHHHH-HHHhCCC---CCCCCCccccccHHHHHHHH
Q 017977          202 RGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA----LAKMIPLF-MMFAGGP---LGSGQQWFSWIHLDDIVNLI  273 (363)
Q Consensus       202 ~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~----~~~~~~~~-~~~~~~~---~~~~~~~~~~i~v~D~a~a~  273 (363)
                      .+|+..+......... .+++++++||+.+||+....    ...+...+ ....+.+   ++++++.++++|++|+|+++
T Consensus       145 ~sK~~~e~~~~~~~~~-~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~  223 (312)
T 2yy7_A          145 ISKQAGERWCEYYHNI-YGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDAT  223 (312)
T ss_dssp             HHHHHHHHHHHHHHHH-HCCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEEEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHh-cCCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceeeeeeHHHHHHHH
Confidence            5564444444333222 38999999999999975321    11233333 3333333   36778889999999999999


Q ss_pred             HHHhcCCCC----CceEEeeCCCCcCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhccCceeeecCcccChhhHHH-cCCC
Q 017977          274 YEALSNPSY----RGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFP  348 (363)
Q Consensus       274 ~~~~~~~~~----~g~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lG~~  348 (363)
                      +.+++++..    +++||+++ +.+++.|+++.+.+.+|.......|... .. ...     .....++++|+++ |||+
T Consensus       224 ~~~~~~~~~~~~~~~~~ni~~-~~~s~~e~~~~i~~~~~~~~i~~~~~~~-~~-~~~-----~~~~~~d~~k~~~~lG~~  295 (312)
T 2yy7_A          224 INIMKAPVEKIKIHSSYNLAA-MSFTPTEIANEIKKHIPEFTITYEPDFR-QK-IAD-----SWPASIDDSQAREDWDWK  295 (312)
T ss_dssp             HHHHHSCGGGCCCSSCEECCS-EEECHHHHHHHHHTTCTTCEEEECCCTH-HH-HHT-----TSCSSBCCHHHHHHHCCC
T ss_pred             HHHHhCcccccccCceEEeCC-CccCHHHHHHHHHHHCCCCceEeccCcc-cc-ccc-----cccccCCHHHHHHHcCCC
Confidence            999987653    36999997 7899999999999999842110011100 00 000     0124578999975 9999


Q ss_pred             cccccHHHHHHHHhC
Q 017977          349 FKYRYVKDALKAIMS  363 (363)
Q Consensus       349 p~~~~~~~~l~~~~~  363 (363)
                      |+++ ++|+|+++++
T Consensus       296 p~~~-l~~~l~~~~~  309 (312)
T 2yy7_A          296 HTFD-LESMTKDMIE  309 (312)
T ss_dssp             CCCC-HHHHHHHHHH
T ss_pred             CCCC-HHHHHHHHHH
Confidence            9997 9999999863

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=100.00  E-value=1.2e-36  Score=268.92  Aligned_cols=272  Identities=20%  Similarity=0.164  Sum_probs=194.1

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCCCC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPI  128 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~~~  128 (363)
                      +||+|||||| ||||++|+++|+++|++|++++|++.+...+....  .....+|+.|.+     +.++|+|||+|+...
T Consensus         4 m~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~--~~~~~~D~~d~~-----~~~~d~vi~~a~~~~   75 (286)
T 3ius_A            4 MTGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASG--AEPLLWPGEEPS-----LDGVTHLLISTAPDS   75 (286)
T ss_dssp             -CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHHTT--EEEEESSSSCCC-----CTTCCEEEECCCCBT
T ss_pred             CcCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhhCC--CeEEEecccccc-----cCCCCEEEECCCccc
Confidence            4579999998 99999999999999999999999886654332111  113446776643     789999999998642


Q ss_pred             CCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC---CcccccccCCCcchhhhhhhcccchhhHH
Q 017977          129 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM---RAAHQEMITWLSDYCAKVYCLVSFNRGVL  205 (363)
Q Consensus       129 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg---~~~~~e~~~~~~~~~~~~~~~~~y~~~k~  205 (363)
                      ..              ...+.++++++.+...+++++||+||. ++||   ..+++|+.+..+.        ..|+.+|+
T Consensus        76 ~~--------------~~~~~~l~~a~~~~~~~~~~~v~~Ss~-~vyg~~~~~~~~E~~~~~p~--------~~Y~~sK~  132 (286)
T 3ius_A           76 GG--------------DPVLAALGDQIAARAAQFRWVGYLSTT-AVYGDHDGAWVDETTPLTPT--------AARGRWRV  132 (286)
T ss_dssp             TB--------------CHHHHHHHHHHHHTGGGCSEEEEEEEG-GGGCCCTTCEECTTSCCCCC--------SHHHHHHH
T ss_pred             cc--------------cHHHHHHHHHHHhhcCCceEEEEeecc-eecCCCCCCCcCCCCCCCCC--------CHHHHHHH
Confidence            21              012467888888743367899999999 8999   4577888765432        12444454


Q ss_pred             HHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCC--CCCCCccccccHHHHHHHHHHHhcCCCCC
Q 017977          206 VCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPL--GSGQQWFSWIHLDDIVNLIYEALSNPSYR  283 (363)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~v~D~a~a~~~~~~~~~~~  283 (363)
                      ..+......    .+++++++||+++||+.......+      ..+.++  ..+++.++++|++|+|++++.+++++..+
T Consensus       133 ~~E~~~~~~----~~~~~~ilRp~~v~G~~~~~~~~~------~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~g  202 (286)
T 3ius_A          133 MAEQQWQAV----PNLPLHVFRLAGIYGPGRGPFSKL------GKGGIRRIIKPGQVFSRIHVEDIAQVLAASMARPDPG  202 (286)
T ss_dssp             HHHHHHHHS----TTCCEEEEEECEEEBTTBSSSTTS------SSSCCCEEECTTCCBCEEEHHHHHHHHHHHHHSCCTT
T ss_pred             HHHHHHHhh----cCCCEEEEeccceECCCchHHHHH------hcCCccccCCCCcccceEEHHHHHHHHHHHHhCCCCC
Confidence            444333322    489999999999999976543222      233332  44467899999999999999999988766


Q ss_pred             ceEEeeCCCCcCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhccC-ceeeecCcccChhhHHH-cCCCcccccHHHHHHHH
Q 017977          284 GVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEG-AFVVLEGQRVVPARAKE-LGFPFKYRYVKDALKAI  361 (363)
Q Consensus       284 g~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~k~~~-lG~~p~~~~~~~~l~~~  361 (363)
                      ++||+++++++++.|+++.+.+.+|.+....++.....  .++. ..+......++++|+++ |||+|++++++|+|+++
T Consensus       203 ~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~p~~~e~l~~~  280 (286)
T 3ius_A          203 AVYNVCDDEPVPPQDVIAYAAELQGLPLPPAVDFDKAD--LTPMARSFYSENKRVRNDRIKEELGVRLKYPNYRVGLEAL  280 (286)
T ss_dssp             CEEEECCSCCBCHHHHHHHHHHHHTCCCCCEEEGGGSC--CCHHHHHTTSCCCEECCHHHHHTTCCCCSCSSHHHHHHHH
T ss_pred             CEEEEeCCCCccHHHHHHHHHHHcCCCCCcccchhhhc--cChhHHHhhcCCceeehHHHHHHhCCCCCcCCHHHHHHHH
Confidence            79999999999999999999999998743322211100  0100 01112456678999976 89999995599999998


Q ss_pred             hC
Q 017977          362 MS  363 (363)
Q Consensus       362 ~~  363 (363)
                      ++
T Consensus       281 ~~  282 (286)
T 3ius_A          281 QA  282 (286)
T ss_dssp             HH
T ss_pred             HH
Confidence            74

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=100.00  E-value=1e-36  Score=273.81  Aligned_cols=283  Identities=15%  Similarity=0.156  Sum_probs=198.1

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCCCC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPI  128 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~~~  128 (363)
                      ++|+|||||||||||++|+++|+++|++|++++|+.............  .  .+......+..-+.++|+|||+|+...
T Consensus         6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~--~--~~~~~~~~~~~Dl~~~d~vi~~a~~~~   81 (321)
T 3vps_A            6 LKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGK--F--LEKPVLELEERDLSDVRLVYHLASHKS   81 (321)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSE--E--ECSCGGGCCHHHHTTEEEEEECCCCCC
T ss_pred             CCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhh--h--ccCCCeeEEeCccccCCEEEECCccCC
Confidence            467999999999999999999999999999999987631111110000  0  000011112222338999999999743


Q ss_pred             CCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC---CcccccccCCCcchhhhhhhcccchhhHH
Q 017977          129 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM---RAAHQEMITWLSDYCAKVYCLVSFNRGVL  205 (363)
Q Consensus       129 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg---~~~~~e~~~~~~~~~~~~~~~~~y~~~k~  205 (363)
                      . ......+...++ |+.++.+++++|.+  .+++++||+||. ++|+   ..+++|+.+..+.        ..|+.+|+
T Consensus        82 ~-~~~~~~~~~~~~-n~~~~~~ll~a~~~--~~v~~~v~~SS~-~v~~~~~~~~~~E~~~~~p~--------~~Y~~sK~  148 (321)
T 3vps_A           82 V-PRSFKQPLDYLD-NVDSGRHLLALCTS--VGVPKVVVGSTC-EVYGQADTLPTPEDSPLSPR--------SPYAASKV  148 (321)
T ss_dssp             H-HHHTTSTTTTHH-HHHHHHHHHHHHHH--HTCCEEEEEEEG-GGGCSCSSSSBCTTSCCCCC--------SHHHHHHH
T ss_pred             h-HHHHhCHHHHHH-HHHHHHHHHHHHHH--cCCCeEEEecCH-HHhCCCCCCCCCCCCCCCCC--------ChhHHHHH
Confidence            2 111222345566 99999999999999  788999999999 8998   4577777764321        22555565


Q ss_pred             HHHHHHHHHhccCCCc-eEEEEeeceEEeCCCCcccchHHHH--HHHhCCCC---CCCCCccccccHHHHHHHHHHHhcC
Q 017977          206 VCREWEGTALKVNKDV-RLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSN  279 (363)
Q Consensus       206 ~~~~~~~~~~~~~~~~-~~~ilRp~~v~g~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~D~a~a~~~~~~~  279 (363)
                      ..+........ ..++ +++++||+.+||+.... ..+++.+  ....+.++   +++++.++++|++|+|++++.++++
T Consensus       149 ~~E~~~~~~~~-~~~~~~~~ilRp~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~  226 (321)
T 3vps_A          149 GLEMVAGAHQR-ASVAPEVGIVRFFNVYGPGERP-DALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVALANR  226 (321)
T ss_dssp             HHHHHHHHHHH-SSSSCEEEEEEECEEECTTCCT-TSHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHHHHHHGGGS
T ss_pred             HHHHHHHHHHH-HcCCCceEEEEeccccCcCCCC-CChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHHHHHHHHhc
Confidence            44444444333 3488 99999999999997654 2233322  33344442   6788899999999999999999998


Q ss_pred             CCCCceEEeeCCCCcCHHHHHHHHHHHhCCCCCC-CCcHHHHHHHhccCceeeecCcccChhhHHH-cCCCc-ccccHHH
Q 017977          280 PSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWL-PVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPF-KYRYVKD  356 (363)
Q Consensus       280 ~~~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lG~~p-~~~~~~~  356 (363)
                      +.. |+||+++++++++.|+++.+. .+|.+..+ ..|..          ........++++|+++ |||+| +++ +++
T Consensus       227 ~~~-g~~~i~~~~~~s~~e~~~~i~-~~g~~~~~~~~~~~----------~~~~~~~~~d~~k~~~~lG~~p~~~~-~~~  293 (321)
T 3vps_A          227 PLP-SVVNFGSGQSLSVNDVIRILQ-ATSPAAEVARKQPR----------PNEITEFRADTALQTRQIGERSGGIG-IEE  293 (321)
T ss_dssp             CCC-SEEEESCSCCEEHHHHHHHHH-TTCTTCEEEEECCC----------TTCCSBCCBCCHHHHHHHCCCSCCCC-HHH
T ss_pred             CCC-CeEEecCCCcccHHHHHHHHH-HhCCCCccccCCCC----------CCCcceeeccHHHHHHHhCCCCCcCC-HHH
Confidence            776 499999999999999999999 99987322 11110          0112346678999976 99999 776 999


Q ss_pred             HHHHHhC
Q 017977          357 ALKAIMS  363 (363)
Q Consensus       357 ~l~~~~~  363 (363)
                      +|+++++
T Consensus       294 ~l~~~~~  300 (321)
T 3vps_A          294 GIRLTLE  300 (321)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9999863

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=100.00  E-value=8.1e-37  Score=278.98  Aligned_cols=294  Identities=14%  Similarity=0.117  Sum_probs=208.4

Q ss_pred             cEEEEecCcchHHHHHHHHHHhC-CCEEEEEeCCCC--cccccCCC--CCccccCcccccCcchHHhhcc--CCCEEEEc
Q 017977           51 MTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRS--KAELIFPG--KKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNL  123 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~--~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~--~~d~Vi~~  123 (363)
                      |+||||||+||||++|+++|++. |++|++++|+..  ....+...  ........+|+.|.+++.++++  ++|+|||+
T Consensus         1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   80 (361)
T 1kew_A            1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHL   80 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CEEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCCHHHHHHHHhhcCCCEEEEC
Confidence            58999999999999999999998 799999999752  22222111  1112244579999999999998  89999999


Q ss_pred             cCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCC--CCC-------CeEEEeccceecCC-c------------ccc
Q 017977          124 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPE--GVR-------PSVLELVKPKYLMR-A------------AHQ  181 (363)
Q Consensus       124 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~-------~~v~~SS~~~~yg~-~------------~~~  181 (363)
                      |+... ...+....+.++++|+.++.++++++.+  .  +++       +|||+||. ++||. .            +++
T Consensus        81 A~~~~-~~~~~~~~~~~~~~Nv~g~~~l~~a~~~--~~~~v~~~~~~~~~iv~~SS~-~v~g~~~~~~~~~~~~~~~~~~  156 (361)
T 1kew_A           81 AAESH-VDRSITGPAAFIETNIVGTYALLEVARK--YWSALGEDKKNNFRFHHISTD-EVYGDLPHPDEVENSVTLPLFT  156 (361)
T ss_dssp             CSCCC-HHHHHHCTHHHHHHHTHHHHHHHHHHHH--HHHTSCHHHHHHCEEEEEEEG-GGGCCCCCGGGSCTTSCCCCBC
T ss_pred             CCCcC-hhhhhhCHHHHHHHHHHHHHHHHHHHHH--hccCcccccccCceEEEeCCH-HHhCCCcccccccccccCCCCC
Confidence            99742 1112344577899999999999999998  6  666       89999999 88882 1            566


Q ss_pred             cccCCCcchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHH--HHHhCCCC---CC
Q 017977          182 EMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL---GS  256 (363)
Q Consensus       182 e~~~~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~--~~~~~~~~---~~  256 (363)
                      |+.+..+        .+.|+.+|...+......... .+++++++||+.+||+.... ..+++.+  ....+.++   ++
T Consensus       157 E~~~~~~--------~~~Y~~sK~~~e~~~~~~~~~-~gi~~~~vrp~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~  226 (361)
T 1kew_A          157 ETTAYAP--------SSPYSASKASSDHLVRAWRRT-YGLPTIVTNCSNNYGPYHFP-EKLIPLVILNALEGKPLPIYGK  226 (361)
T ss_dssp             TTSCCCC--------CSHHHHHHHHHHHHHHHHHHH-HCCCEEEEEECEEESTTCCT-TSHHHHHHHHHHHTCCEEEETT
T ss_pred             CCCCCCC--------CCccHHHHHHHHHHHHHHHHH-hCCcEEEEeeceeECCCCCc-ccHHHHHHHHHHcCCCceEcCC
Confidence            6655321        122455554444444333322 38999999999999997532 1223322  33445443   67


Q ss_pred             CCCccccccHHHHHHHHHHHhcCCCCCceEEeeCCCCcCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhccCc--eeeecC
Q 017977          257 GQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGA--FVVLEG  334 (363)
Q Consensus       257 ~~~~~~~i~v~D~a~a~~~~~~~~~~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~  334 (363)
                      +.+.++++|++|+|++++.+++....+++||+++++++++.|+++.+.+.+|.+.....|..   .......  ......
T Consensus       227 ~~~~~~~i~v~Dva~a~~~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~p~~---~~~~~~~~~~~~~~~  303 (361)
T 1kew_A          227 GDQIRDWLYVEDHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYR---EQITYVADRPGHDRR  303 (361)
T ss_dssp             SCCEEEEEEHHHHHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSSCGG---GGEEEECCCTTCCCB
T ss_pred             CceeEeeEEHHHHHHHHHHHHhCCCCCCEEEecCCCeeeHHHHHHHHHHHhCCcCccccccc---cceeecCCCCcccce
Confidence            77889999999999999999986655569999999999999999999999987532221211   0000000  000123


Q ss_pred             cccChhhHHH-cCCCcccccHHHHHHHHh
Q 017977          335 QRVVPARAKE-LGFPFKYRYVKDALKAIM  362 (363)
Q Consensus       335 ~~~~~~k~~~-lG~~p~~~~~~~~l~~~~  362 (363)
                      ..++++|+++ |||+|+++ ++++|++++
T Consensus       304 ~~~d~~k~~~~lG~~p~~~-~~e~l~~~~  331 (361)
T 1kew_A          304 YAIDAGKISRELGWKPLET-FESGIRKTV  331 (361)
T ss_dssp             CCBCCHHHHHHHCCCCSCC-HHHHHHHHH
T ss_pred             eecCHHHHHHHhCCCCccC-HHHHHHHHH
Confidence            4578999975 99999997 999999886

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=100.00  E-value=7.6e-36  Score=268.27  Aligned_cols=297  Identities=15%  Similarity=0.161  Sum_probs=197.5

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeC-CCCc---ccccCCCC---CccccCcccccCcchHHhhccCCCEEEEc
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTR-SRSK---AELIFPGK---KTRFFPGVMIAEEPQWRDCIQGSTAVVNL  123 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~---~~~~~~~~---~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~  123 (363)
                      |+||||||+||||++|+++|+++|++|++++| ++..   ...+....   ....+..+|+.|.+++.++++++|+|||+
T Consensus         2 k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~   81 (322)
T 2p4h_X            2 GRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIEGCVGIFHT   81 (322)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHTTCSEEEEC
T ss_pred             CEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHcCCCEEEEc
Confidence            68999999999999999999999999999998 5432   11111100   01124457999999999999999999999


Q ss_pred             cCCCCCCCCChhh-HHHHHHHHHHHHHHHHHHHHhCCC-CCCCeEEEeccceecC----CcccccccCCCcchhhh-hhh
Q 017977          124 AGTPIGTRWSSEI-KKEIKESRIRVTSKVVDLINESPE-GVRPSVLELVKPKYLM----RAAHQEMITWLSDYCAK-VYC  196 (363)
Q Consensus       124 a~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~v~~SS~~~~yg----~~~~~e~~~~~~~~~~~-~~~  196 (363)
                      |+..   ...... .+.++++|+.++.+++++|.+  . +++++||+||.+.+|+    ..+++|+.+....+... +..
T Consensus        82 A~~~---~~~~~~~~~~~~~~nv~gt~~l~~aa~~--~~~~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~p~  156 (322)
T 2p4h_X           82 ASPI---DFAVSEPEEIVTKRTVDGALGILKACVN--SKTVKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPF  156 (322)
T ss_dssp             CCCC-----------CHHHHHHHHHHHHHHHHHTT--CSSCCEEEEEEEGGGTSCSSSCCSEECTTCCCCHHHHHHHCCT
T ss_pred             CCcc---cCCCCChHHHHHHHHHHHHHHHHHHHHh--cCCccEEEEeccHHHcccCCCCCeecCCccccchhhhcccCcc
Confidence            9752   222222 245889999999999999998  5 6889999999854554    23566665433222111 000


Q ss_pred             cccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCc-ccchHHHH-HHHhCCCCCCCCCccccccHHHHHHHHH
Q 017977          197 LVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA-LAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIY  274 (363)
Q Consensus       197 ~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~a~~  274 (363)
                      ...|+.+|+..+....+.... .|++++++||+++|||.... .......+ ....+.+...+...++++|++|+|++++
T Consensus       157 ~~~Y~~sK~~~e~~~~~~~~~-~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~Dva~a~~  235 (322)
T 2p4h_X          157 GWNYAVSKTLAEKAVLEFGEQ-NGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIGVTRFHMVHVDDVARAHI  235 (322)
T ss_dssp             THHHHHHHHHHHHHHHHHHHH-TTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSCGGGCCEEEEEEEEHHHHHHHHH
T ss_pred             cccHHHHHHHHHHHHHHHHHh-cCCcEEEEcCCceECCCCCCCCCchHHHHHHHHhCCCccCcCCCcCEEEHHHHHHHHH
Confidence            113777776555544433332 48999999999999996532 11122111 2233433211113348999999999999


Q ss_pred             HHhcCCCCCceEEeeCCCCcCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhccCceeeecCcccChhhHHHcCCCcccccH
Q 017977          275 EALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYV  354 (363)
Q Consensus       275 ~~~~~~~~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~p~~~~~  354 (363)
                      .+++++...|.|| ++++++++.|+++.+.+.++.. .++...     .+......  ....++++|+++|||+|+++ +
T Consensus       236 ~~~~~~~~~g~~~-~~~~~~s~~e~~~~i~~~~~~~-~~~~~~-----~~~~~~~~--~~~~~d~~k~~~lG~~p~~~-~  305 (322)
T 2p4h_X          236 YLLENSVPGGRYN-CSPFIVPIEEMSQLLSAKYPEY-QILTVD-----ELKEIKGA--RLPDLNTKKLVDAGFDFKYT-I  305 (322)
T ss_dssp             HHHHSCCCCEEEE-CCCEEEEHHHHHHHHHHHCTTS-CCCCTT-----TTTTCCCE--ECCEECCHHHHHTTCCCCCC-H
T ss_pred             HHhhCcCCCCCEE-EcCCCCCHHHHHHHHHHhCCCC-CCCCCc-----cccCCCCC--cceecccHHHHHhCCccCCC-H
Confidence            9998765567888 5667899999999999887531 122110     01111111  34667899998899999997 9


Q ss_pred             HHHHHHHhC
Q 017977          355 KDALKAIMS  363 (363)
Q Consensus       355 ~~~l~~~~~  363 (363)
                      +++|+++++
T Consensus       306 ~~~l~~~~~  314 (322)
T 2p4h_X          306 EDMFDDAIQ  314 (322)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999998863

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=100.00  E-value=3.7e-36  Score=278.81  Aligned_cols=301  Identities=16%  Similarity=0.105  Sum_probs=203.8

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCccc-----------------ccC----CCCCccccCcccccC
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE-----------------LIF----PGKKTRFFPGVMIAE  106 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----------------~~~----~~~~~~~~~~~d~~~  106 (363)
                      ..||+|||||||||||++|+++|+++|++|++++|......                 .+.    .......+..+|+.|
T Consensus         9 ~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d   88 (404)
T 1i24_A            9 HHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICD   88 (404)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTS
T ss_pred             cCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCC
Confidence            45679999999999999999999999999999998643210                 000    000111244579999


Q ss_pred             cchHHhhccC--CCEEEEccCCCCCC--CCChhhHHHHHHHHHHHHHHHHHHHHhCCCCC-CCeEEEeccceecC--Ccc
Q 017977          107 EPQWRDCIQG--STAVVNLAGTPIGT--RWSSEIKKEIKESRIRVTSKVVDLINESPEGV-RPSVLELVKPKYLM--RAA  179 (363)
Q Consensus       107 ~~~~~~~~~~--~d~Vi~~a~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~v~~SS~~~~yg--~~~  179 (363)
                      .+++.+++++  +|+|||+|+.....  ..........+++|+.++.++++++.+  .+. +++|++||. ++||  ..+
T Consensus        89 ~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~--~~~~~~~V~~SS~-~vyg~~~~~  165 (404)
T 1i24_A           89 FEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKE--FGEECHLVKLGTM-GEYGTPNID  165 (404)
T ss_dssp             HHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHH--HCTTCEEEEECCG-GGGCCCSSC
T ss_pred             HHHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHH--hCCCcEEEEeCcH-HHhCCCCCC
Confidence            9999999987  99999999974221  112222345889999999999999998  666 589999998 8898  344


Q ss_pred             cccccCCCcch------hhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc--------------
Q 017977          180 HQEMITWLSDY------CAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL--------------  239 (363)
Q Consensus       180 ~~e~~~~~~~~------~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~--------------  239 (363)
                      ++|+.+.....      .......+.|+.+|+..+......... .|++++++||+.||||+....              
T Consensus       166 ~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~~~  244 (404)
T 1i24_A          166 IEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA-WGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDA  244 (404)
T ss_dssp             BCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHH-HCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCST
T ss_pred             CCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHh-cCCeEEEEecceeeCCCCCcccccccccccccccc
Confidence            55542100000      000001223556665554444333222 389999999999999975310              


Q ss_pred             --cchHHHH--HHHhCCCC---CCCCCccccccHHHHHHHHHHHhcCCCC-C--ceEEeeCCCCcCHHHHHHHHHHH---
Q 017977          240 --AKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSNPSY-R--GVINGTAPNPVRLAEMCDHLGNV---  306 (363)
Q Consensus       240 --~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~D~a~a~~~~~~~~~~-~--g~~~i~~~~~~s~~el~~~i~~~---  306 (363)
                        ...+..+  ....+.++   +++.+.++++|++|+|++++.+++++.. +  ++||+++ +++++.|+++.+.+.   
T Consensus       245 ~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~yni~~-~~~s~~e~~~~i~~~~~~  323 (404)
T 1i24_A          245 VFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFT-EQFSVNELASLVTKAGSK  323 (404)
T ss_dssp             TTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECS-EEEEHHHHHHHHHHHHHT
T ss_pred             chhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcccCCCceEEEECC-CCCcHHHHHHHHHHHHHh
Confidence              1233333  34455553   6778899999999999999999987653 3  4999998 889999999999998   


Q ss_pred             hCCCCC-CCCcHHHHHHHhccCceeeecCcccChhhHHHcCCCcccccHHHHHHHHh
Q 017977          307 LGRPSW-LPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIM  362 (363)
Q Consensus       307 ~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~p~~~~~~~~l~~~~  362 (363)
                      +|.+.. ...|.+.     .   ........++++|+++|||+|+++ +++++++++
T Consensus       324 ~g~~~~~~~~p~~~-----~---~~~~~~~~~d~~k~~~LG~~p~~~-~~~~l~~~~  371 (404)
T 1i24_A          324 LGLDVKKMTVPNPR-----V---EAEEHYYNAKHTKLMELGLEPHYL-SDSLLDSLL  371 (404)
T ss_dssp             TTCCCCEEEECCSS-----C---SCSSCCCCBCCCHHHHTTCCCCCC-CHHHHHHHH
T ss_pred             hCCCccccccCccc-----C---ccccceEecCHHHHHHcCCCcCcC-HHHHHHHHH
Confidence            676522 1122110     0   001123446788998899999986 999999876

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=100.00  E-value=3.9e-36  Score=269.35  Aligned_cols=279  Identities=14%  Similarity=0.117  Sum_probs=179.5

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccC--CCEEEEccCCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQG--STAVVNLAGTP  127 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--~d~Vi~~a~~~  127 (363)
                      +|+|||||||||||++|+++|+++|++|++++|+....       .   ...+|+.|.+++.+++++  +|+|||+|+..
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-------~---~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~   71 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARP-------K---FEQVNLLDSNAVHHIIHDFQPHVIVHCAAER   71 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC----------------------------CHHHHHHHCCSEEEECC---
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCCC-------C---eEEecCCCHHHHHHHHHhhCCCEEEECCccc
Confidence            47999999999999999999999999999999876441       1   445799999999988875  89999999974


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC--CcccccccCCCcchhhhhhhcccchhhHH
Q 017977          128 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM--RAAHQEMITWLSDYCAKVYCLVSFNRGVL  205 (363)
Q Consensus       128 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg--~~~~~e~~~~~~~~~~~~~~~~~y~~~k~  205 (363)
                      . ...+...++..+++|+.++.++++++.+  .++ ++||+||. ++|+  ..+++|+.+..+.        ..|+.+|.
T Consensus        72 ~-~~~~~~~~~~~~~~n~~~~~~l~~a~~~--~~~-~~v~~SS~-~v~~~~~~~~~E~~~~~~~--------~~Y~~sK~  138 (315)
T 2ydy_A           72 R-PDVVENQPDAASQLNVDASGNLAKEAAA--VGA-FLIYISSD-YVFDGTNPPYREEDIPAPL--------NLYGKTKL  138 (315)
T ss_dssp             -----------------CHHHHHHHHHHHH--HTC-EEEEEEEG-GGSCSSSCSBCTTSCCCCC--------SHHHHHHH
T ss_pred             C-hhhhhcCHHHHHHHHHHHHHHHHHHHHH--cCC-eEEEEchH-HHcCCCCCCCCCCCCCCCc--------CHHHHHHH
Confidence            2 2223456678899999999999999998  666 79999999 7888  5667777654321        12444453


Q ss_pred             HHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHH-HH-HH-hCCCC-CCCCCccccccHHHHHHHHHHHhcCC-
Q 017977          206 VCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPL-FM-MF-AGGPL-GSGQQWFSWIHLDDIVNLIYEALSNP-  280 (363)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~-~~-~~-~~~~~-~~~~~~~~~i~v~D~a~a~~~~~~~~-  280 (363)
                      ..+.....     .+++++++||+.|||+.......++.. +. .. .+.++ ..+++.+++++++|+|++++.+++++ 
T Consensus       139 ~~e~~~~~-----~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~  213 (315)
T 2ydy_A          139 DGEKAVLE-----NNLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRM  213 (315)
T ss_dssp             HHHHHHHH-----HCTTCEEEEECSEECSCSSGGGSTTGGGHHHHHCCSSCEEEECSSBBCCEEHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHH-----hCCCeEEEeeeeeeCCCCcccccHHHHHHHHHHhcCCCeeeccCceECcEEHHHHHHHHHHHHHhhc
Confidence            33333322     156789999999999976421122221 12 22 34443 23467789999999999999998753 


Q ss_pred             ---CCCceEEeeCCCCcCHHHHHHHHHHHhCCCCC--CCCcHHHHHHHhccCceeeecCcccChhhHHHcCCCcccccHH
Q 017977          281 ---SYRGVINGTAPNPVRLAEMCDHLGNVLGRPSW--LPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVK  355 (363)
Q Consensus       281 ---~~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~p~~~~~~  355 (363)
                         ..+++||+++++++++.|+++.+.+.+|.+..  .+.|.+     ... .........++++|++++||+|+++ ++
T Consensus       214 ~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~-----~~~-~~~~~~~~~~d~~k~~~~G~~p~~~-~~  286 (315)
T 2ydy_A          214 LDPSIKGTFHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDS-----PVL-GAQRPRNAQLDCSKLETLGIGQRTP-FR  286 (315)
T ss_dssp             TCTTCCEEEECCCSCCBCHHHHHHHHHHHTTCCCTTEEEECSC-----CCS-SSCCCSBCCBCCHHHHHTTCCCCCC-HH
T ss_pred             cccCCCCeEEEcCCCcccHHHHHHHHHHHhCCChhheeccccc-----ccc-ccCCCcccccchHHHHhcCCCCCCC-HH
Confidence               35679999999999999999999999998742  122220     000 0011134567899998779999998 99


Q ss_pred             HHHHHHhC
Q 017977          356 DALKAIMS  363 (363)
Q Consensus       356 ~~l~~~~~  363 (363)
                      ++|+++++
T Consensus       287 ~~l~~~~~  294 (315)
T 2ydy_A          287 IGIKESLW  294 (315)
T ss_dssp             HHHHHHHG
T ss_pred             HHHHHHHH
Confidence            99999864

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=2.3e-36  Score=277.34  Aligned_cols=298  Identities=13%  Similarity=0.067  Sum_probs=209.3

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcc-----cccCC-----CCCccccCcccccCcchHHhhccC--CC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-----ELIFP-----GKKTRFFPGVMIAEEPQWRDCIQG--ST  118 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~~~~~-----~~~~~~~~~~d~~~~~~~~~~~~~--~d  118 (363)
                      |+||||||+||||++|+++|+++|++|++++|+....     ..+..     ......+..+|+.|.+++.+++++  +|
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d  104 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPT  104 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhcCCC
Confidence            6899999999999999999999999999999987541     11110     011122445799999999988885  69


Q ss_pred             EEEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCC---CCeEEEeccceecC---CcccccccCCCcchhh
Q 017977          119 AVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGV---RPSVLELVKPKYLM---RAAHQEMITWLSDYCA  192 (363)
Q Consensus       119 ~Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~~~v~~SS~~~~yg---~~~~~e~~~~~~~~~~  192 (363)
                      +|||+|+.... ......++..+++|+.++.++++++.+  .++   ++|||+||. ++|+   ..+++|+.+..+.   
T Consensus       105 ~vih~A~~~~~-~~~~~~~~~~~~~N~~g~~~l~~a~~~--~~~~~~~~iv~~SS~-~~~~~~~~~~~~E~~~~~~~---  177 (375)
T 1t2a_A          105 EIYNLGAQSHV-KISFDLAEYTADVDGVGTLRLLDAVKT--CGLINSVKFYQASTS-ELYGKVQEIPQKETTPFYPR---  177 (375)
T ss_dssp             EEEECCSCCCH-HHHHHSHHHHHHHHTHHHHHHHHHHHH--TTCTTTCEEEEEEEG-GGTCSCSSSSBCTTSCCCCC---
T ss_pred             EEEECCCcccc-cccccCHHHHHHHHHHHHHHHHHHHHH--hCCCccceEEEecch-hhhCCCCCCCCCccCCCCCC---
Confidence            99999997421 112345678899999999999999999  666   789999999 8888   3467777654321   


Q ss_pred             hhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCc--ccchHH-HH-HHHhCCC----CCCCCCccccc
Q 017977          193 KVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA--LAKMIP-LF-MMFAGGP----LGSGQQWFSWI  264 (363)
Q Consensus       193 ~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~--~~~~~~-~~-~~~~~~~----~~~~~~~~~~i  264 (363)
                           ..|+.+|+..+........ ..+++++++||+++|||....  ....+. .+ ....+..    ++++++.++++
T Consensus       178 -----~~Y~~sK~~~e~~~~~~~~-~~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i  251 (375)
T 1t2a_A          178 -----SPYGAAKLYAYWIVVNFRE-AYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWG  251 (375)
T ss_dssp             -----SHHHHHHHHHHHHHHHHHH-HHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCE
T ss_pred             -----ChhHHHHHHHHHHHHHHHH-HhCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeeeE
Confidence                 2255556444444333332 238999999999999996532  112222 22 2334432    26778899999


Q ss_pred             cHHHHHHHHHHHhcCCCCCceEEeeCCCCcCHHHHHHHHHHHhCCCCCCC---CcHHHHHHHhc-------c--Cceeee
Q 017977          265 HLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLP---VPEFALKAVLG-------E--GAFVVL  332 (363)
Q Consensus       265 ~v~D~a~a~~~~~~~~~~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~~~---~~~~~~~~~~~-------~--~~~~~~  332 (363)
                      |++|+|++++.+++++. .++||+++++++++.|+++.+.+.+|.+..+.   +|.+.+....+       .  ......
T Consensus       252 ~v~Dva~a~~~~~~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  330 (375)
T 1t2a_A          252 HAKDYVEAMWLMLQNDE-PEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTEV  330 (375)
T ss_dssp             EHHHHHHHHHHHHHSSS-CCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSCC
T ss_pred             EHHHHHHHHHHHHhcCC-CceEEEeCCCcccHHHHHHHHHHHhCCCcccccccccccccccccccceeecCcccCCcccc
Confidence            99999999999998765 48999999999999999999999999863211   22221110000       0  000111


Q ss_pred             cCcccChhhHHH-cCCCcccccHHHHHHHHhC
Q 017977          333 EGQRVVPARAKE-LGFPFKYRYVKDALKAIMS  363 (363)
Q Consensus       333 ~~~~~~~~k~~~-lG~~p~~~~~~~~l~~~~~  363 (363)
                      ....++++|+++ |||+|+++ ++|+|+++++
T Consensus       331 ~~~~~d~~k~~~~lG~~p~~~-l~e~l~~~~~  361 (375)
T 1t2a_A          331 DFLQGDCTKAKQKLNWKPRVA-FDELVREMVH  361 (375)
T ss_dssp             CBCCBCCHHHHHHHCCCCCSC-HHHHHHHHHH
T ss_pred             hhhcCCHHHHHHhcCCCccCC-HHHHHHHHHH
Confidence            234568999964 99999997 9999998863

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=100.00  E-value=2.5e-36  Score=274.17  Aligned_cols=289  Identities=14%  Similarity=0.107  Sum_probs=203.4

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcc-----cccCCCCCccccCcccccCcchHHhhccC--CCEEEE
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-----ELIFPGKKTRFFPGVMIAEEPQWRDCIQG--STAVVN  122 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--~d~Vi~  122 (363)
                      ||+|||||||||||++|+++|+++|++|++++|+..+.     ..+... ....+..+|+.|.+++.+++++  +|+|||
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~-~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih   79 (347)
T 1orr_A            1 MAKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSL-GNFEFVHGDIRNKNDVTRLITKYMPDSCFH   79 (347)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTT-CCCEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CcEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccC-CceEEEEcCCCCHHHHHHHHhccCCCEEEE
Confidence            57999999999999999999999999999999864221     111111 1112456799999999999988  999999


Q ss_pred             ccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCC-CeEEEeccceecC---Ccc----------------ccc
Q 017977          123 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVR-PSVLELVKPKYLM---RAA----------------HQE  182 (363)
Q Consensus       123 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~v~~SS~~~~yg---~~~----------------~~e  182 (363)
                      +|+.... ......++..+++|+.++.++++++.+  .+++ ++||+||. ++||   ..+                ++|
T Consensus        80 ~A~~~~~-~~~~~~~~~~~~~nv~~~~~l~~a~~~--~~~~~~iv~~SS~-~v~g~~~~~~~~e~~~~~~~~~~~~~~~e  155 (347)
T 1orr_A           80 LAGQVAM-TTSIDNPCMDFEINVGGTLNLLEAVRQ--YNSNCNIIYSSTN-KVYGDLEQYKYNETETRYTCVDKPNGYDE  155 (347)
T ss_dssp             CCCCCCH-HHHHHCHHHHHHHHHHHHHHHHHHHHH--HCTTCEEEEEEEG-GGGTTCTTSCEEECSSCEEETTCTTCBCT
T ss_pred             CCcccCh-hhhhhCHHHHHHHHHHHHHHHHHHHHH--hCCCceEEEeccH-HHhCCCCcCCcccccccccccccccCccc
Confidence            9996321 112345678899999999999999998  6665 89999999 8888   222                233


Q ss_pred             ccCCCcchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc--cchHHHH--HHHhCC-----C
Q 017977          183 MITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL--AKMIPLF--MMFAGG-----P  253 (363)
Q Consensus       183 ~~~~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~--~~~~~~~--~~~~~~-----~  253 (363)
                      +.+..        ....|+.+|+..+......... .+++++++||+.+||+.....  ..++..+  ....+.     +
T Consensus       156 ~~~~~--------~~~~Y~~sK~~~E~~~~~~~~~-~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (347)
T 1orr_A          156 STQLD--------FHSPYGCSKGAADQYMLDYARI-FGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKP  226 (347)
T ss_dssp             TSCCC--------CCHHHHHHHHHHHHHHHHHHHH-HCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCC
T ss_pred             cCCCC--------CCCchHHHHHHHHHHHHHHHHH-hCCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCCC
Confidence            33221        1223566665555554443333 389999999999999975321  1222222  222222     3


Q ss_pred             ---CCCCCCccccccHHHHHHHHHHHhcCC-C-CCceEEeeCCC--CcCHHHHHHHHHHHhCCCCCC-CCcHHHHHHHhc
Q 017977          254 ---LGSGQQWFSWIHLDDIVNLIYEALSNP-S-YRGVINGTAPN--PVRLAEMCDHLGNVLGRPSWL-PVPEFALKAVLG  325 (363)
Q Consensus       254 ---~~~~~~~~~~i~v~D~a~a~~~~~~~~-~-~~g~~~i~~~~--~~s~~el~~~i~~~~g~~~~~-~~~~~~~~~~~~  325 (363)
                         ++++++.+++++++|+|++++.++++. . .+++||++++.  ++++.|+++.+.+.+|.+..+ ..|.     ...
T Consensus       227 ~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~v~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~-----~~~  301 (347)
T 1orr_A          227 FTISGNGKQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLPV-----RES  301 (347)
T ss_dssp             EEEESSSCCEEECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEEEECC-----CSS
T ss_pred             eEEecCCcceEeeEEHHHHHHHHHHHHhccccCCCCEEEeCCCCCCCccHHHHHHHHHHHhCCCCCceeCCC-----CCC
Confidence               267888999999999999999999852 2 34499999986  499999999999999986322 2220     011


Q ss_pred             cCceeeecCcccChhhHH-HcCCCcccccHHHHHHHHhC
Q 017977          326 EGAFVVLEGQRVVPARAK-ELGFPFKYRYVKDALKAIMS  363 (363)
Q Consensus       326 ~~~~~~~~~~~~~~~k~~-~lG~~p~~~~~~~~l~~~~~  363 (363)
                      +     .....++++|++ .|||+|+++ ++++|+++++
T Consensus       302 ~-----~~~~~~d~~k~~~~lG~~p~~~-~~e~l~~~~~  334 (347)
T 1orr_A          302 D-----QRVFVADIKKITNAIDWSPKVS-AKDGVQKMYD  334 (347)
T ss_dssp             C-----CSEECBCCHHHHHHHCCCCCSC-HHHHHHHHHH
T ss_pred             C-----cceeecCHHHHHHHHCCCccCC-HHHHHHHHHH
Confidence            1     122456799996 599999987 9999998863

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=100.00  E-value=9.2e-36  Score=275.49  Aligned_cols=290  Identities=14%  Similarity=0.129  Sum_probs=206.5

Q ss_pred             ccEEEEecCcchHHHHHHHHHH-hCCCEEEEEeCCCCcc---------ccc-------CCC--CCc---cccCcccccCc
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQ-ADNHQVRVLTRSRSKA---------ELI-------FPG--KKT---RFFPGVMIAEE  107 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~-~~g~~V~~~~r~~~~~---------~~~-------~~~--~~~---~~~~~~d~~~~  107 (363)
                      +|+||||||+||||++|+++|+ ++|++|++++|+....         ..+       ...  ...   ..+..+|+.|.
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   81 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence            3699999999999999999999 9999999999976542         111       000  001   22456799999


Q ss_pred             chHHhhcc--C-CCEEEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC--C-----
Q 017977          108 PQWRDCIQ--G-STAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM--R-----  177 (363)
Q Consensus       108 ~~~~~~~~--~-~d~Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg--~-----  177 (363)
                      +++.++++  + +|+|||+|+.... .......+.++++|+.++.+++++|.+  .++++|||+||. ++|+  .     
T Consensus        82 ~~~~~~~~~~~~~d~vih~A~~~~~-~~~~~~~~~~~~~Nv~g~~~ll~a~~~--~~~~~iv~~SS~-~v~g~~~~~~~~  157 (397)
T 1gy8_A           82 DFLNGVFTRHGPIDAVVHMCAFLAV-GESVRDPLKYYDNNVVGILRLLQAMLL--HKCDKIIFSSSA-AIFGNPTMGSVS  157 (397)
T ss_dssp             HHHHHHHHHSCCCCEEEECCCCCCH-HHHHHCHHHHHHHHHHHHHHHHHHHHH--TTCCEEEEEEEG-GGTBSCCC----
T ss_pred             HHHHHHHHhcCCCCEEEECCCccCc-CcchhhHHHHHHHHhHHHHHHHHHHHH--hCCCEEEEECCH-HHhCCCCccccc
Confidence            99998887  6 9999999997421 112345678999999999999999999  788899999998 8888  2     


Q ss_pred             ---cccccccCCCcchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCC--------cccchHHHH
Q 017977          178 ---AAHQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGG--------ALAKMIPLF  246 (363)
Q Consensus       178 ---~~~~e~~~~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~--------~~~~~~~~~  246 (363)
                         .+++|+.+..+        ...|+.+|+..+......... .+++++++||+++||+...        ....+++.+
T Consensus       158 ~~~~~~~E~~~~~p--------~~~Y~~sK~~~e~~~~~~~~~-~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~  228 (397)
T 1gy8_A          158 TNAEPIDINAKKSP--------ESPYGESKLIAERMIRDCAEA-YGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPII  228 (397)
T ss_dssp             -CCCCBCTTSCCBC--------SSHHHHHHHHHHHHHHHHHHH-HCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHH
T ss_pred             ccccCcCccCCCCC--------CCchHHHHHHHHHHHHHHHHH-HCCcEEEEeccceeCCCccccccccccchhHHHHHH
Confidence               35666655321        123555565555544443333 3899999999999999631        112344332


Q ss_pred             ------HHHhCC------------CC---C------CCCCccccccHHHHHHHHHHHhcCCC-C-----C---ceEEeeC
Q 017977          247 ------MMFAGG------------PL---G------SGQQWFSWIHLDDIVNLIYEALSNPS-Y-----R---GVINGTA  290 (363)
Q Consensus       247 ------~~~~~~------------~~---~------~~~~~~~~i~v~D~a~a~~~~~~~~~-~-----~---g~~~i~~  290 (363)
                            ....+.            ++   +      ++++.+++||++|+|++++.+++++. .     .   ++||+++
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ni~~  308 (397)
T 1gy8_A          229 LGRVMSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGT  308 (397)
T ss_dssp             HHHHHHHHSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESC
T ss_pred             HHHHHHHHHhcCccccccccccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHHhcccccccccccCCCcEEEeCC
Confidence                  222232            22   2      56788999999999999999987532 2     3   7999999


Q ss_pred             CCCcCHHHHHHHHHHHhCCCCCC-CCcHHHHHHHhccCceeeecCcccChhhHH-HcCCCcccccHHHHHHHHh
Q 017977          291 PNPVRLAEMCDHLGNVLGRPSWL-PVPEFALKAVLGEGAFVVLEGQRVVPARAK-ELGFPFKYRYVKDALKAIM  362 (363)
Q Consensus       291 ~~~~s~~el~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~lG~~p~~~~~~~~l~~~~  362 (363)
                      ++++++.|+++.+.+.+|.+..+ ..|..     .++     .....++++|++ .|||+|++++++++|++++
T Consensus       309 ~~~~s~~e~~~~i~~~~g~~~~~~~~~~~-----~~~-----~~~~~~d~~k~~~~lG~~p~~~~l~e~l~~~~  372 (397)
T 1gy8_A          309 SRGYSVREVIEVARKTTGHPIPVRECGRR-----EGD-----PAYLVAASDKAREVLGWKPKYDTLEAIMETSW  372 (397)
T ss_dssp             SCCEEHHHHHHHHHHHHCCCCCEEEECCC-----TTC-----CSEECBCCHHHHHHTCCCCSCCSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHhCCCCCeeeCCCC-----CCc-----ccccccCHHHHHHHhCCCCCcCCHHHHHHHHH
Confidence            99999999999999999976321 11100     111     123456799996 5999999934999999886

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=100.00  E-value=1.3e-35  Score=268.66  Aligned_cols=290  Identities=17%  Similarity=0.194  Sum_probs=202.2

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccc----cCC-CCCccccCcccccCcchHHhhcc--CCCEEEEc
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL----IFP-GKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNL  123 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~-~~~~~~~~~~d~~~~~~~~~~~~--~~d~Vi~~  123 (363)
                      |+||||||+||||++|+++|+++|++|++++|.......    +.. .........+|+.|.+++.++++  ++|+|||+
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vih~   80 (338)
T 1udb_A            1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF   80 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhccCCCEEEEC
Confidence            589999999999999999999999999999875432111    000 00111244579999999988886  59999999


Q ss_pred             cCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC---CcccccccCCCcchhhhhhhcccc
Q 017977          124 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM---RAAHQEMITWLSDYCAKVYCLVSF  200 (363)
Q Consensus       124 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg---~~~~~e~~~~~~~~~~~~~~~~~y  200 (363)
                      |+.... ......+...+++|+.++.++++++.+  .+++++|++||. ++||   ..+++|+.+..+.       ...|
T Consensus        81 A~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~iv~~SS~-~~~g~~~~~~~~e~~~~~~~-------~~~Y  149 (338)
T 1udb_A           81 AGLKAV-GESVQKPLEYYDNNVNGTLRLISAMRA--ANVKNFIFSSSA-TVYGDNPKIPYVESFPTGTP-------QSPY  149 (338)
T ss_dssp             CSCCCH-HHHHHCHHHHHHHHHHHHHHHHHHHHH--HTCCEEEEEEEG-GGGCSCCSSSBCTTSCCCCC-------SSHH
T ss_pred             CccCcc-ccchhcHHHHHHHHHHHHHHHHHHHHh--cCCCeEEEEccH-HHhCCCCCCCcCcccCCCCC-------CChH
Confidence            996321 112234567899999999999999998  788899999998 8888   3466676553211       1225


Q ss_pred             hhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCC---------cccchHHHH-HHHh--CCCC---------CCCCC
Q 017977          201 NRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGG---------ALAKMIPLF-MMFA--GGPL---------GSGQQ  259 (363)
Q Consensus       201 ~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~---------~~~~~~~~~-~~~~--~~~~---------~~~~~  259 (363)
                      +.+|...+...........+++++++||+++||+...         ....+++.+ ....  +.++         +++.+
T Consensus       150 ~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~  229 (338)
T 1udb_A          150 GKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTG  229 (338)
T ss_dssp             HHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSC
T ss_pred             HHHHHHHHHHHHHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCce
Confidence            5556545544444333323799999999999998421         012334433 2222  2221         25677


Q ss_pred             ccccccHHHHHHHHHHHhcCC--CCC-ceEEeeCCCCcCHHHHHHHHHHHhCCCCCCC-CcHHHHHHHhccCceeeecCc
Q 017977          260 WFSWIHLDDIVNLIYEALSNP--SYR-GVINGTAPNPVRLAEMCDHLGNVLGRPSWLP-VPEFALKAVLGEGAFVVLEGQ  335 (363)
Q Consensus       260 ~~~~i~v~D~a~a~~~~~~~~--~~~-g~~~i~~~~~~s~~el~~~i~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~  335 (363)
                      .+++||++|+|++++.++++.  ..+ ++||+++++++++.|+++.+.+.+|.+..+. .|.     ..++.     ...
T Consensus       230 ~~~~i~v~Dva~a~~~~l~~~~~~~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~-----~~~~~-----~~~  299 (338)
T 1udb_A          230 VRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPR-----REGDL-----PAY  299 (338)
T ss_dssp             EECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTSCCCEEEECC-----CTTCC-----SBC
T ss_pred             eeeeEEHHHHHHHHHHHHhhhhccCCCcEEEecCCCceeHHHHHHHHHHHhCCCCcceeCCC-----CCCch-----hhh
Confidence            899999999999999998753  233 5999999999999999999999999763211 110     01111     234


Q ss_pred             ccChhhHH-HcCCCcccccHHHHHHHHh
Q 017977          336 RVVPARAK-ELGFPFKYRYVKDALKAIM  362 (363)
Q Consensus       336 ~~~~~k~~-~lG~~p~~~~~~~~l~~~~  362 (363)
                      .++++|++ .|||+|+++ ++++|++++
T Consensus       300 ~~d~~k~~~~lG~~p~~~-l~~~l~~~~  326 (338)
T 1udb_A          300 WADASKADRELNWRVTRT-LDEMAQDTW  326 (338)
T ss_dssp             CBCCHHHHHHHCCCCCCC-HHHHHHHHH
T ss_pred             hcCHHHHHHHcCCCcCCC-HHHHHHHHH
Confidence            56789996 599999996 999999876

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=100.00  E-value=4.3e-35  Score=267.86  Aligned_cols=287  Identities=15%  Similarity=0.079  Sum_probs=204.8

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCC-----CEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccC---CCEEEE
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADN-----HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQG---STAVVN  122 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g-----~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~---~d~Vi~  122 (363)
                      |+|||||||||||++|+++|+++|     ++|++++|+..... . . ........+|+.|.+++.+++++   +|+|||
T Consensus         2 ~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-~-~-~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~vih   78 (364)
T 2v6g_A            2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-H-E-DNPINYVQCDISDPDDSQAKLSPLTDVTHVFY   78 (364)
T ss_dssp             EEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-C-C-SSCCEEEECCTTSHHHHHHHHTTCTTCCEEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-c-c-cCceEEEEeecCCHHHHHHHHhcCCCCCEEEE
Confidence            689999999999999999999999     99999999876543 1 1 11122445799999999999988   999999


Q ss_pred             ccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeE-------EEeccceecCC-----cccccccCCCc--
Q 017977          123 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSV-------LELVKPKYLMR-----AAHQEMITWLS--  188 (363)
Q Consensus       123 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v-------~~SS~~~~yg~-----~~~~e~~~~~~--  188 (363)
                      +|+...      .++...+++|+.++.+++++|.+...+++++|       |+||. ++||.     .+++|+.+..+  
T Consensus        79 ~a~~~~------~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~-~vyg~~~~~~~~~~E~~~~~~~~  151 (364)
T 2v6g_A           79 VTWANR------STEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPF-ESYGKIESHDPPYTEDLPRLKYM  151 (364)
T ss_dssp             CCCCCC------SSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCG-GGTTTSCCCCSSBCTTSCCCSSC
T ss_pred             CCCCCc------chHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEech-hhccccccCCCCCCccccCCccc
Confidence            999741      24678899999999999999998211788887       78888 88982     46777765332  


Q ss_pred             -chhhhhhhcccchhhHHHHHHHHHHHhccCCC-ceEEEEeeceEEeCCCCcc-cchHHH--HHHH---hCCCC---CCC
Q 017977          189 -DYCAKVYCLVSFNRGVLVCREWEGTALKVNKD-VRLALIRIGIVLGKDGGAL-AKMIPL--FMMF---AGGPL---GSG  257 (363)
Q Consensus       189 -~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~-~~~~ilRp~~v~g~~~~~~-~~~~~~--~~~~---~~~~~---~~~  257 (363)
                       .|.              ..+..... +....+ ++++++||+.+||+..... ..+.+.  +...   .+.++   +++
T Consensus       152 ~~y~--------------~~E~~~~~-~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~  216 (364)
T 2v6g_A          152 NFYY--------------DLEDIMLE-EVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCK  216 (364)
T ss_dssp             CHHH--------------HHHHHHHH-HHTTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCCSCH
T ss_pred             hhhH--------------HHHHHHHH-HhhcCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceecCCCc
Confidence             221              12222222 223345 9999999999999976432 222332  2222   45543   444


Q ss_pred             ---CCccccccHHHHHHHHHHHhcCCCC-CceEEeeCCCCcCHHHHHHHHHHHhCCCC-CC--CCcHHHHHHH-------
Q 017977          258 ---QQWFSWIHLDDIVNLIYEALSNPSY-RGVINGTAPNPVRLAEMCDHLGNVLGRPS-WL--PVPEFALKAV-------  323 (363)
Q Consensus       258 ---~~~~~~i~v~D~a~a~~~~~~~~~~-~g~~~i~~~~~~s~~el~~~i~~~~g~~~-~~--~~~~~~~~~~-------  323 (363)
                         ....++++++|+|++++.+++++.. +++||+++++++++.|+++.+.+.+|.+. .+  ++|.+.....       
T Consensus       217 ~~~~~~~~~~~v~Dva~a~~~~~~~~~~~g~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~  296 (364)
T 2v6g_A          217 AAWDGYSDCSDADLIAEHHIWAAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGVECGEYEEGVDLKLQDLMKGKEPVW  296 (364)
T ss_dssp             HHHHSCBCCEEHHHHHHHHHHHHHCGGGTTEEEEECCSCCBCHHHHHHHHHHHHTCCBCCCCTTCCCCHHHHTTTCHHHH
T ss_pred             ccccccCCCCcHHHHHHHHHHHHhCCCCCCceEEecCCCcCCHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHhhhHHHH
Confidence               2447889999999999999987653 44999999999999999999999999873 23  4443322111       


Q ss_pred             ------hccCce---ee----------ecC-cccChhhHHHcCCCcccccHHHHHHHHhC
Q 017977          324 ------LGEGAF---VV----------LEG-QRVVPARAKELGFPFKYRYVKDALKAIMS  363 (363)
Q Consensus       324 ------~~~~~~---~~----------~~~-~~~~~~k~~~lG~~p~~~~~~~~l~~~~~  363 (363)
                            .+....   ..          ..+ ..++++|+++|||+|.++ ++++|+++++
T Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~-~~e~l~~~~~  355 (364)
T 2v6g_A          297 EEIVRENGLTPTKLKDVGIWWFGDVILGNECFLDSMNKSKEHGFLGFRN-SKNAFISWID  355 (364)
T ss_dssp             HHHHHHTTCCCCCHHHHCCHHHHHHHHTSCCCCBCCHHHHHTTCCCCCC-HHHHHHHHHH
T ss_pred             HHHHHHhCCCccccccccccchhhhccccchhhcchHHHHhcCCCCCCC-HHHHHHHHHH
Confidence                  110000   00          033 468899997799999887 9999998863

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=100.00  E-value=8.1e-36  Score=269.83  Aligned_cols=298  Identities=18%  Similarity=0.194  Sum_probs=198.3

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCccc---ccCCCC---CccccCcccccCcchHHhhccCCCEEEE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE---LIFPGK---KTRFFPGVMIAEEPQWRDCIQGSTAVVN  122 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~~~~---~~~~~~~~d~~~~~~~~~~~~~~d~Vi~  122 (363)
                      ++++||||||+||||++|+++|+++|++|++++|+.....   .+....   ....+..+|+.|.+++.++++++|+|||
T Consensus         4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih   83 (337)
T 2c29_D            4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGCTGVFH   83 (337)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTTCSEEEE
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcCCCEEEE
Confidence            4579999999999999999999999999999999876321   110100   0112345799999999999999999999


Q ss_pred             ccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCC-CCCeEEEeccceecC----CcccccccCCCcchhhh-hhh
Q 017977          123 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEG-VRPSVLELVKPKYLM----RAAHQEMITWLSDYCAK-VYC  196 (363)
Q Consensus       123 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~v~~SS~~~~yg----~~~~~e~~~~~~~~~~~-~~~  196 (363)
                      +|+.. . .........++++|+.++.+++++|.+  .+ ++++||+||.+.+|+    ..+++|+.+....+... ...
T Consensus        84 ~A~~~-~-~~~~~~~~~~~~~nv~gt~~ll~a~~~--~~~~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  159 (337)
T 2c29_D           84 VATPM-D-FESKDPENEVIKPTIEGMLGIMKSCAA--AKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMT  159 (337)
T ss_dssp             CCCCC-C-SSCSSHHHHTHHHHHHHHHHHHHHHHH--HSCCCEEEEECCGGGTSCSSSCCSEECTTCCCCHHHHHHHCCT
T ss_pred             ecccc-C-CCCCChHHHHHHHHHHHHHHHHHHHHh--CCCccEEEEeeeHhhcccCCCCCcccCcccCCchhhhcccCCc
Confidence            99864 2 112222346889999999999999998  55 789999999855665    23456665432222110 011


Q ss_pred             cccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCc-ccchHHHH-HHHhCCCC--CCCCCccccccHHHHHHH
Q 017977          197 LVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA-LAKMIPLF-MMFAGGPL--GSGQQWFSWIHLDDIVNL  272 (363)
Q Consensus       197 ~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~-~~~~~~~~-~~~~~~~~--~~~~~~~~~i~v~D~a~a  272 (363)
                      .+.|+.+|...+......... .|++++++||+++|||.... ....+... ....+.+.  ... ....++|++|+|++
T Consensus       160 ~~~Y~~sK~~~E~~~~~~~~~-~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~i~v~Dva~a  237 (337)
T 2c29_D          160 AWMYFVSKTLAEQAAWKYAKE-NNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSII-RQGQFVHLDDLCNA  237 (337)
T ss_dssp             THHHHHHHHHHHHHHHHHHHH-HTCCEEEEEECEEESCCSCSSCCHHHHHHTHHHHTCGGGHHHH-TEEEEEEHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHHH-cCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCCcccccc-CCCCEEEHHHHHHH
Confidence            234777776555544333322 38999999999999997532 11111111 11223221  111 12349999999999


Q ss_pred             HHHHhcCCCCCceEEeeCCCCcCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhccCceeeecCcccChhhHHHcCCCcccc
Q 017977          273 IYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYR  352 (363)
Q Consensus       273 ~~~~~~~~~~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~p~~~  352 (363)
                      ++.+++++...|.|++++ ..++++|+++.+.+.++.. .++..       +.... .......++++|+++|||+|+++
T Consensus       238 ~~~~~~~~~~~~~~~~~~-~~~s~~e~~~~i~~~~~~~-~~~~~-------~~~~~-~~~~~~~~d~~k~~~lG~~p~~~  307 (337)
T 2c29_D          238 HIYLFENPKAEGRYICSS-HDCIILDLAKMLREKYPEY-NIPTE-------FKGVD-ENLKSVCFSSKKLTDLGFEFKYS  307 (337)
T ss_dssp             HHHHHHCTTCCEEEEECC-EEEEHHHHHHHHHHHCTTS-CCCSC-------CTTCC-TTCCCCEECCHHHHHHTCCCCCC
T ss_pred             HHHHhcCcccCceEEEeC-CCCCHHHHHHHHHHHCCCc-cCCCC-------CCccc-CCCccccccHHHHHHcCCCcCCC
Confidence            999998766667886655 5689999999999987431 11110       00000 01134557889997799999997


Q ss_pred             cHHHHHHHHhC
Q 017977          353 YVKDALKAIMS  363 (363)
Q Consensus       353 ~~~~~l~~~~~  363 (363)
                       ++|+|+++++
T Consensus       308 -l~e~l~~~~~  317 (337)
T 2c29_D          308 -LEDMFTGAVD  317 (337)
T ss_dssp             -HHHHHHHHHH
T ss_pred             -HHHHHHHHHH
Confidence             9999999863

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=100.00  E-value=1.1e-35  Score=269.85  Aligned_cols=299  Identities=12%  Similarity=0.033  Sum_probs=209.0

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccc--cC--CCCCccccCcccccCcchHHhhccC--CCEEEEc
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL--IF--PGKKTRFFPGVMIAEEPQWRDCIQG--STAVVNL  123 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~--~~~~~~~~~~~d~~~~~~~~~~~~~--~d~Vi~~  123 (363)
                      +|+||||||+||||++|+++|+++|++|++++|+......  +.  .......+..+|+.|.+++.+++++  +|+|||+
T Consensus         3 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   82 (345)
T 2z1m_A            3 GKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEVYNL   82 (345)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCEEEEC
Confidence            4799999999999999999999999999999998765321  10  0011122456799999999988885  6999999


Q ss_pred             cCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCC-CCeEEEeccceecC---CcccccccCCCcchhhhhhhccc
Q 017977          124 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGV-RPSVLELVKPKYLM---RAAHQEMITWLSDYCAKVYCLVS  199 (363)
Q Consensus       124 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~v~~SS~~~~yg---~~~~~e~~~~~~~~~~~~~~~~~  199 (363)
                      |+... ...+....+..+++|+.++.+++++|.+  .++ +++|++||. ++||   ..+++|+.+..+        ...
T Consensus        83 A~~~~-~~~~~~~~~~~~~~Nv~g~~~l~~a~~~--~~~~~~iv~~SS~-~vyg~~~~~~~~e~~~~~~--------~~~  150 (345)
T 2z1m_A           83 AAQSF-VGVSFEQPILTAEVDAIGVLRILEALRT--VKPDTKFYQASTS-EMFGKVQEIPQTEKTPFYP--------RSP  150 (345)
T ss_dssp             CCCCC-HHHHTTSHHHHHHHHTHHHHHHHHHHHH--HCTTCEEEEEEEG-GGGCSCSSSSBCTTSCCCC--------CSH
T ss_pred             CCCcc-hhhhhhCHHHHHHHHHHHHHHHHHHHHH--hCCCceEEEEech-hhcCCCCCCCCCccCCCCC--------CCh
Confidence            99742 1112345678899999999999999998  565 789999999 8898   345677655322        112


Q ss_pred             chhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCc--ccchHHH-H-HHHhCCC----CCCCCCccccccHHHHHH
Q 017977          200 FNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA--LAKMIPL-F-MMFAGGP----LGSGQQWFSWIHLDDIVN  271 (363)
Q Consensus       200 y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~--~~~~~~~-~-~~~~~~~----~~~~~~~~~~i~v~D~a~  271 (363)
                      |+.+|+..+........ ..+++++++|+.++|||+...  ....+.. + ....+..    ++++.+.++++|++|+|+
T Consensus       151 Y~~sK~~~e~~~~~~~~-~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~  229 (345)
T 2z1m_A          151 YAVAKLFGHWITVNYRE-AYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVE  229 (345)
T ss_dssp             HHHHHHHHHHHHHHHHH-HHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHH-HhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHH
Confidence            45555444444333332 237999999999999997532  1121221 2 2233432    266678889999999999


Q ss_pred             HHHHHhcCCCCCceEEeeCCCCcCHHHHHHHHHHHhCCCCCC---CCcHHHHHHHhcc---------CceeeecCcccCh
Q 017977          272 LIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWL---PVPEFALKAVLGE---------GAFVVLEGQRVVP  339 (363)
Q Consensus       272 a~~~~~~~~~~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~~---~~~~~~~~~~~~~---------~~~~~~~~~~~~~  339 (363)
                      +++.+++++. .++||+++++++++.|+++.+.+.+|.+..+   ++|.+.+....++         ...........++
T Consensus       230 a~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  308 (345)
T 2z1m_A          230 AMWLMMQQPE-PDDYVIATGETHTVREFVEKAAKIAGFDIEWVGEGINEKGIDRNTGKVIVEVSEEFFRPAEVDILVGNP  308 (345)
T ss_dssp             HHHHHHTSSS-CCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCBCCBCC
T ss_pred             HHHHHHhCCC-CceEEEeCCCCccHHHHHHHHHHHhCCCccccccccccccccccccccccccCcccCCCCCcceeecCH
Confidence            9999998765 4799999999999999999999999986321   1222211100000         0001112344688


Q ss_pred             hhHH-HcCCCcccccHHHHHHHHhC
Q 017977          340 ARAK-ELGFPFKYRYVKDALKAIMS  363 (363)
Q Consensus       340 ~k~~-~lG~~p~~~~~~~~l~~~~~  363 (363)
                      +|++ .|||+|+++ ++++|+++++
T Consensus       309 ~k~~~~lG~~p~~~-~~~~l~~~~~  332 (345)
T 2z1m_A          309 EKAMKKLGWKPRTT-FDELVEIMME  332 (345)
T ss_dssp             HHHHHHHCCCCCSC-HHHHHHHHHH
T ss_pred             HHHHHHcCCcccCC-HHHHHHHHHH
Confidence            9996 499999986 9999998863

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=100.00  E-value=5.1e-36  Score=271.24  Aligned_cols=295  Identities=15%  Similarity=0.151  Sum_probs=194.4

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCccccc-----CCCCCccccCcccccCcchHHhhccCCCEEEEcc
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI-----FPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA  124 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a  124 (363)
                      +|+||||||+||||++|+++|+++||+|++++|+.......     ........+..+|+.|.+++.++++++|+|||+|
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~A   88 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIAGCDFVFHVA   88 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHTTCSEEEEES
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHcCCCEEEEeC
Confidence            57999999999999999999999999999999976542110     0000111234579999999999999999999999


Q ss_pred             CCCCCCCCChhhH-HHHHHHHHHHHHHHHHHHHhCCCC-CCCeEEEeccceecC----C--cccccccCCCcchhhh-hh
Q 017977          125 GTPIGTRWSSEIK-KEIKESRIRVTSKVVDLINESPEG-VRPSVLELVKPKYLM----R--AAHQEMITWLSDYCAK-VY  195 (363)
Q Consensus       125 ~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~~~-~~~~v~~SS~~~~yg----~--~~~~e~~~~~~~~~~~-~~  195 (363)
                      +.. .  .....+ ++++++|+.++.+++++|.+  .+ ++++||+||.+.+|+    .  .+++|+.+....+... +.
T Consensus        89 ~~~-~--~~~~~~~~~~~~~nv~gt~~ll~aa~~--~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  163 (338)
T 2rh8_A           89 TPV-H--FASEDPENDMIKPAIQGVVNVMKACTR--AKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKP  163 (338)
T ss_dssp             SCC-C--C---------CHHHHHHHHHHHHHHHH--CTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-------C
T ss_pred             Ccc-C--CCCCCcHHHHHHHHHHHHHHHHHHHHH--cCCcCEEEEEecHHHeecCCcCCCCcccChhhccchhhccccCC
Confidence            864 1  122222 35889999999999999998  64 889999999854554    1  2677775432222110 00


Q ss_pred             hcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCc-ccchHHHH-HHHhCCCC--CC------CCCcccccc
Q 017977          196 CLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA-LAKMIPLF-MMFAGGPL--GS------GQQWFSWIH  265 (363)
Q Consensus       196 ~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~-~~~~~~~~-~~~~~~~~--~~------~~~~~~~i~  265 (363)
                      ....|+.+|...+......... .|++++++||+++|||.... ....+..+ ....+.+.  +.      +...++++|
T Consensus       164 ~~~~Y~~sK~~~E~~~~~~~~~-~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~  242 (338)
T 2rh8_A          164 PTWGYPASKTLAEKAAWKFAEE-NNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLINGMKGMQMLSGSVSIAH  242 (338)
T ss_dssp             CCCCCTTSCCHHHHHHHHHHHH-HTCCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHSSEEEEE
T ss_pred             ccchHHHHHHHHHHHHHHHHHH-cCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCccccccccccccccCcccEEE
Confidence            0113666665555444333222 38999999999999997532 11111111 11222211  10      112247999


Q ss_pred             HHHHHHHHHHHhcCCCCCceEEeeCCCCcCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhccCceeeecCcccChhhHHHc
Q 017977          266 LDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKEL  345 (363)
Q Consensus       266 v~D~a~a~~~~~~~~~~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~l  345 (363)
                      ++|+|++++.+++++...|.|+++++ .+++.|+++.+.+.++... ++..       +.+...  .....++++|+++|
T Consensus       243 v~Dva~a~~~~~~~~~~~~~~~~~~~-~~s~~e~~~~l~~~~~~~~-~~~~-------~~~~~~--~~~~~~d~~k~~~l  311 (338)
T 2rh8_A          243 VEDVCRAHIFVAEKESASGRYICCAA-NTSVPELAKFLSKRYPQYK-VPTD-------FGDFPP--KSKLIISSEKLVKE  311 (338)
T ss_dssp             HHHHHHHHHHHHHCTTCCEEEEECSE-EECHHHHHHHHHHHCTTSC-CCCC-------CTTSCS--SCSCCCCCHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCcCCcEEEecC-CCCHHHHHHHHHHhCCCCC-CCCC-------CCCCCc--CcceeechHHHHHh
Confidence            99999999999987666678888764 6899999999999876311 1111       011000  01256789999889


Q ss_pred             CCCcccccHHHHHHHHh
Q 017977          346 GFPFKYRYVKDALKAIM  362 (363)
Q Consensus       346 G~~p~~~~~~~~l~~~~  362 (363)
                      ||+|+++ ++|+|++++
T Consensus       312 G~~p~~~-l~~gl~~~~  327 (338)
T 2rh8_A          312 GFSFKYG-IEEIYDESV  327 (338)
T ss_dssp             TCCCSCC-HHHHHHHHH
T ss_pred             CCCCCCC-HHHHHHHHH
Confidence            9999996 999999886

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=100.00  E-value=1.4e-35  Score=271.96  Aligned_cols=299  Identities=14%  Similarity=0.072  Sum_probs=206.6

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcc--cccCCC-------CCccccCcccccCcchHHhhccC--CC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA--ELIFPG-------KKTRFFPGVMIAEEPQWRDCIQG--ST  118 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~-------~~~~~~~~~d~~~~~~~~~~~~~--~d  118 (363)
                      ||+||||||+||||++|+++|+++|++|++++|+....  ..+...       .....+..+|+.|.+++.+++++  +|
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d   80 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD   80 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCS
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcCCC
Confidence            47999999999999999999999999999999986541  111110       11122456799999999988875  69


Q ss_pred             EEEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCC---CCeEEEeccceecC---CcccccccCCCcchhh
Q 017977          119 AVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGV---RPSVLELVKPKYLM---RAAHQEMITWLSDYCA  192 (363)
Q Consensus       119 ~Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~~~v~~SS~~~~yg---~~~~~e~~~~~~~~~~  192 (363)
                      +|||+|+.... ....+.....+++|+.++.++++++.+  .++   +++|++||. ++||   ..+++|+.+..+.   
T Consensus        81 ~vih~A~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~~~~iv~~SS~-~v~g~~~~~~~~E~~~~~~~---  153 (372)
T 1db3_A           81 EVYNLGAMSHV-AVSFESPEYTADVDAMGTLRLLEAIRF--LGLEKKTRFYQASTS-ELYGLVQEIPQKETTPFYPR---  153 (372)
T ss_dssp             EEEECCCCCTT-TTTTSCHHHHHHHHTHHHHHHHHHHHH--TTCTTTCEEEEEEEG-GGGTTCCSSSBCTTSCCCCC---
T ss_pred             EEEECCcccCc-cccccCHHHHHHHHHHHHHHHHHHHHH--hCCCCCcEEEEeCCh-hhhCCCCCCCCCccCCCCCC---
Confidence            99999997432 233445678899999999999999999  666   789999998 8898   3467777654321   


Q ss_pred             hhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCc--ccchHHHH--HHHhCCC----CCCCCCccccc
Q 017977          193 KVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA--LAKMIPLF--MMFAGGP----LGSGQQWFSWI  264 (363)
Q Consensus       193 ~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~--~~~~~~~~--~~~~~~~----~~~~~~~~~~i  264 (363)
                           ..|+.+|...+........ ..+++++++|++++|||....  ....+..+  ....+..    ++++++.++++
T Consensus       154 -----~~Y~~sK~~~e~~~~~~~~-~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i  227 (372)
T 1db3_A          154 -----SPYAVAKLYAYWITVNYRE-SYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWG  227 (372)
T ss_dssp             -----SHHHHHHHHHHHHHHHHHH-HHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCE
T ss_pred             -----ChHHHHHHHHHHHHHHHHH-HhCCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeeee
Confidence                 2255556444444433332 248999999999999997532  11222222  2334432    26778899999


Q ss_pred             cHHHHHHHHHHHhcCCCCCceEEeeCCCCcCHHHHHHHHHHHhCCCCCCC---CcHH-HHH----------------HHh
Q 017977          265 HLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLP---VPEF-ALK----------------AVL  324 (363)
Q Consensus       265 ~v~D~a~a~~~~~~~~~~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~~~---~~~~-~~~----------------~~~  324 (363)
                      |++|+|++++.+++++. .++||+++++++++.|+++.+.+.+|.+..+.   +|.+ .+.                ..+
T Consensus       228 ~v~Dva~a~~~~~~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  306 (372)
T 1db3_A          228 HAKDYVKMQWMMLQQEQ-PEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAV  306 (372)
T ss_dssp             EHHHHHHHHHHTTSSSS-CCCEEECCCCCEEHHHHHHHHHHTTTEEEEEESCGGGCEEEEEEECSSSCTTCCTTCEEEEE
T ss_pred             EHHHHHHHHHHHHhcCC-CceEEEcCCCceeHHHHHHHHHHHhCCCcccccccccccccccccccccccccccccceeec
Confidence            99999999999998765 47999999999999999999999999752211   1111 000                000


Q ss_pred             cc--CceeeecCcccChhhHHH-cCCCcccccHHHHHHHHhC
Q 017977          325 GE--GAFVVLEGQRVVPARAKE-LGFPFKYRYVKDALKAIMS  363 (363)
Q Consensus       325 ~~--~~~~~~~~~~~~~~k~~~-lG~~p~~~~~~~~l~~~~~  363 (363)
                      ..  ..........+|++|+++ |||+|+++ ++|+|+++++
T Consensus       307 ~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~-l~e~l~~~~~  347 (372)
T 1db3_A          307 DPRYFRPAEVETLLGDPTKAHEKLGWKPEIT-LREMVSEMVA  347 (372)
T ss_dssp             CGGGCCCCC-CCCCBCCHHHHHHHCCCCCSC-HHHHHHHHHH
T ss_pred             cccccCCCchhhhccCHHHHHHHhCCccccC-HHHHHHHHHH
Confidence            00  001111234468999965 99999997 9999999863

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=100.00  E-value=2.8e-35  Score=270.73  Aligned_cols=291  Identities=15%  Similarity=0.080  Sum_probs=206.5

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcc-----cccCCC----CC-ccccCcccccCcchHHhhccC--CC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-----ELIFPG----KK-TRFFPGVMIAEEPQWRDCIQG--ST  118 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~~~~~~----~~-~~~~~~~d~~~~~~~~~~~~~--~d  118 (363)
                      |+||||||+||||++|+++|+++|++|++++|+....     ..+...    .. ...+..+|+.|.+++.+++++  +|
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d  108 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPD  108 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhcCCC
Confidence            6899999999999999999999999999999987642     111110    00 122445799999999988885  69


Q ss_pred             EEEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCC-----CeEEEeccceecC--CcccccccCCCcchh
Q 017977          119 AVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVR-----PSVLELVKPKYLM--RAAHQEMITWLSDYC  191 (363)
Q Consensus       119 ~Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----~~v~~SS~~~~yg--~~~~~e~~~~~~~~~  191 (363)
                      +|||+|+.... ..+.......+++|+.++.+++++|.+  .+++     +|||+||. ++||  ..+++|+.+..+.  
T Consensus       109 ~Vih~A~~~~~-~~~~~~~~~~~~~nv~~~~~l~~a~~~--~~~~~~~~~~~v~~SS~-~vyg~~~~~~~E~~~~~~~--  182 (381)
T 1n7h_A          109 EVYNLAAQSHV-AVSFEIPDYTADVVATGALRLLEAVRS--HTIDSGRTVKYYQAGSS-EMFGSTPPPQSETTPFHPR--  182 (381)
T ss_dssp             EEEECCSCCCH-HHHHHSHHHHHHHHTHHHHHHHHHHHH--HHHHHCCCCEEEEEEEG-GGGTTSCSSBCTTSCCCCC--
T ss_pred             EEEECCcccCc-cccccCHHHHHHHHHHHHHHHHHHHHH--hCCccCCccEEEEeCcH-HHhCCCCCCCCCCCCCCCC--
Confidence            99999997421 112345678899999999999999998  5554     89999999 8898  2367777653321  


Q ss_pred             hhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCc--ccchHHH-H-HHHhCCC----CCCCCCcccc
Q 017977          192 AKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA--LAKMIPL-F-MMFAGGP----LGSGQQWFSW  263 (363)
Q Consensus       192 ~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~--~~~~~~~-~-~~~~~~~----~~~~~~~~~~  263 (363)
                            ..|+.+|+..+........ ..+++++++|++++|||+...  ....+.. + ....+..    ++++++.+++
T Consensus       183 ------~~Y~~sK~~~E~~~~~~~~-~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~  255 (381)
T 1n7h_A          183 ------SPYAASKCAAHWYTVNYRE-AYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDW  255 (381)
T ss_dssp             ------SHHHHHHHHHHHHHHHHHH-HHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEEC
T ss_pred             ------CchHHHHHHHHHHHHHHHH-HhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeee
Confidence                  2255556444444333332 238999999999999997532  1122221 2 2334432    2677888999


Q ss_pred             ccHHHHHHHHHHHhcCCCCCceEEeeCCCCcCHHHHHHHHHHHhCCCCC--CCCcHHHHHHHhccCceeeecCcccChhh
Q 017977          264 IHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSW--LPVPEFALKAVLGEGAFVVLEGQRVVPAR  341 (363)
Q Consensus       264 i~v~D~a~a~~~~~~~~~~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~k  341 (363)
                      +|++|+|++++.+++++. .++||+++++++++.|+++.+.+.+|.+..  +.+..       ............++++|
T Consensus       256 v~v~Dva~a~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~-------~~~~~~~~~~~~~d~~k  327 (381)
T 1n7h_A          256 GFAGDYVEAMWLMLQQEK-PDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQ-------RYFRPAEVDNLQGDASK  327 (381)
T ss_dssp             EEHHHHHHHHHHHHTSSS-CCEEEECCSCEEEHHHHHHHHHHHTTCCGGGTEEECG-------GGSCSSCCCBCCBCCHH
T ss_pred             EEHHHHHHHHHHHHhCCC-CCeEEeeCCCCCcHHHHHHHHHHHcCCCcccccccCc-------ccCCccccccccCCHHH
Confidence            999999999999998765 489999999999999999999999997521  11110       00001111234568999


Q ss_pred             HHH-cCCCcccccHHHHHHHHhC
Q 017977          342 AKE-LGFPFKYRYVKDALKAIMS  363 (363)
Q Consensus       342 ~~~-lG~~p~~~~~~~~l~~~~~  363 (363)
                      +++ |||+|+++ ++++|+++++
T Consensus       328 ~~~~lG~~p~~~-l~e~l~~~~~  349 (381)
T 1n7h_A          328 AKEVLGWKPQVG-FEKLVKMMVD  349 (381)
T ss_dssp             HHHHHCCCCCSC-HHHHHHHHHH
T ss_pred             HHHhcCCcccCC-HHHHHHHHHH
Confidence            965 99999986 9999998863

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=100.00  E-value=4.6e-36  Score=266.86  Aligned_cols=275  Identities=11%  Similarity=0.038  Sum_probs=198.5

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccC--CCEEEEccCCCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQG--STAVVNLAGTPI  128 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--~d~Vi~~a~~~~  128 (363)
                      |+|||||||||||++|+++|+ +|++|++++|+..             ...+|+.|.+++.+++++  +|+|||+|+...
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~-------------~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~   66 (299)
T 1n2s_A            1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK-------------EFCGDFSNPKGVAETVRKLRPDVIVNAAAHTA   66 (299)
T ss_dssp             CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS-------------SSCCCTTCHHHHHHHHHHHCCSEEEECCCCCC
T ss_pred             CeEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc-------------cccccCCCHHHHHHHHHhcCCCEEEECcccCC
Confidence            589999999999999999999 8999999999761             345799999999999986  999999999642


Q ss_pred             CCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC---CcccccccCCCcchhhhhhhcccchhhHH
Q 017977          129 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM---RAAHQEMITWLSDYCAKVYCLVSFNRGVL  205 (363)
Q Consensus       129 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg---~~~~~e~~~~~~~~~~~~~~~~~y~~~k~  205 (363)
                      . ......++..+++|+.++.+++++|.+  .++ ++||+||. ++|+   ..+++|+.+..+.        +.|+.+|+
T Consensus        67 ~-~~~~~~~~~~~~~n~~~~~~l~~a~~~--~~~-~~v~~SS~-~vy~~~~~~~~~E~~~~~p~--------~~Y~~sK~  133 (299)
T 1n2s_A           67 V-DKAESEPELAQLLNATSVEAIAKAANE--TGA-WVVHYSTD-YVFPGTGDIPWQETDATSPL--------NVYGKTKL  133 (299)
T ss_dssp             H-HHHTTCHHHHHHHHTHHHHHHHHHHTT--TTC-EEEEEEEG-GGSCCCTTCCBCTTSCCCCS--------SHHHHHHH
T ss_pred             H-hhhhcCHHHHHHHHHHHHHHHHHHHHH--cCC-cEEEEecc-cEEeCCCCCCCCCCCCCCCc--------cHHHHHHH
Confidence            1 112345678899999999999999998  666 69999999 8898   3467777664321        12444454


Q ss_pred             HHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHH--HHHhCCCC-CCCCCccccccHHHHHHHHHHHhcCC--
Q 017977          206 VCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL-GSGQQWFSWIHLDDIVNLIYEALSNP--  280 (363)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~i~v~D~a~a~~~~~~~~--  280 (363)
                      ..+.....   .  ..+++++||+++||+....   ++..+  ....+.++ ..+++.++++|++|+|++++.+++++  
T Consensus       134 ~~E~~~~~---~--~~~~~ilRp~~v~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~  205 (299)
T 1n2s_A          134 AGEKALQD---N--CPKHLIFRTSWVYAGKGNN---FAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIRVALN  205 (299)
T ss_dssp             HHHHHHHH---H--CSSEEEEEECSEECSSSCC---HHHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHH---h--CCCeEEEeeeeecCCCcCc---HHHHHHHHHhcCCCEEeecCcccCCeeHHHHHHHHHHHHHHhcc
Confidence            33333322   1  2389999999999997542   23222  23344443 23457899999999999999999865  


Q ss_pred             C--CCceEEeeCCCCcCHHHHHHHHHHHhCCCC-CCCCcHHHH--HHHhccCceeeecCcccChhhHHH-cCCCcccccH
Q 017977          281 S--YRGVINGTAPNPVRLAEMCDHLGNVLGRPS-WLPVPEFAL--KAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYRYV  354 (363)
Q Consensus       281 ~--~~g~~~i~~~~~~s~~el~~~i~~~~g~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~k~~~-lG~~p~~~~~  354 (363)
                      .  .+++||+++++++++.|+++.+.+.+|.+. .++.+....  ...+.. .........++++|+++ |||+|+ + +
T Consensus       206 ~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~k~~~~lG~~p~-~-~  282 (299)
T 1n2s_A          206 KPEVAGLYHLVAGGTTTWHDYAALVFDEARKAGITLALTELNAVPTSAYPT-PASRPGNSRLNTEKFQRNFDLILP-Q-W  282 (299)
T ss_dssp             CGGGCEEEECCCBSCEEHHHHHHHHHHHHHHHTCCCCCCEEEEECSTTSCC-SSCCCSBCCBCCHHHHHHHTCCCC-B-H
T ss_pred             ccccCceEEEeCCCCCCHHHHHHHHHHHhCCCccccccccccccccccccC-cCCCCCceeeeHHHHHHhcCCCCC-C-H
Confidence            2  367999999999999999999999998752 111110000  000000 00112345678999975 899998 5 9


Q ss_pred             HHHHHHHhC
Q 017977          355 KDALKAIMS  363 (363)
Q Consensus       355 ~~~l~~~~~  363 (363)
                      +|+|+++++
T Consensus       283 ~~~l~~~~~  291 (299)
T 1n2s_A          283 ELGVKRMLT  291 (299)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999998863

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=100.00  E-value=8.3e-36  Score=264.31  Aligned_cols=268  Identities=12%  Similarity=0.089  Sum_probs=198.1

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc--CCCEEEEccCC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGT  126 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~Vi~~a~~  126 (363)
                      ..|+|||||||||||++|+++|+++|++|++++|+.                 +|+.|.+++.++++  ++|+|||+|+.
T Consensus        11 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~-----------------~Dl~d~~~~~~~~~~~~~d~vih~A~~   73 (292)
T 1vl0_A           11 HHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQD-----------------LDITNVLAVNKFFNEKKPNVVINCAAH   73 (292)
T ss_dssp             -CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT-----------------CCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred             ccceEEEECCCChHHHHHHHHHHhCCCeEEeccCcc-----------------CCCCCHHHHHHHHHhcCCCEEEECCcc
Confidence            347999999999999999999999999999999961                 68889999999888  79999999996


Q ss_pred             CCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC---CcccccccCCCcchhhhhhhcccchhh
Q 017977          127 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM---RAAHQEMITWLSDYCAKVYCLVSFNRG  203 (363)
Q Consensus       127 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg---~~~~~e~~~~~~~~~~~~~~~~~y~~~  203 (363)
                      ... ......+...+++|+.++.++++++.+  .++ ++||+||. ++|+   ..+++|+.+..+.        ..|+.+
T Consensus        74 ~~~-~~~~~~~~~~~~~nv~~~~~l~~a~~~--~~~-~iv~~SS~-~v~~~~~~~~~~E~~~~~~~--------~~Y~~s  140 (292)
T 1vl0_A           74 TAV-DKCEEQYDLAYKINAIGPKNLAAAAYS--VGA-EIVQISTD-YVFDGEAKEPITEFDEVNPQ--------SAYGKT  140 (292)
T ss_dssp             CCH-HHHHHCHHHHHHHHTHHHHHHHHHHHH--HTC-EEEEEEEG-GGSCSCCSSCBCTTSCCCCC--------SHHHHH
T ss_pred             CCH-HHHhcCHHHHHHHHHHHHHHHHHHHHH--cCC-eEEEechH-HeECCCCCCCCCCCCCCCCc--------cHHHHH
Confidence            321 122345678999999999999999998  677 89999999 8888   3477777764321        124444


Q ss_pred             HHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHH--HHHhCCCC-CCCCCccccccHHHHHHHHHHHhcCC
Q 017977          204 VLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL-GSGQQWFSWIHLDDIVNLIYEALSNP  280 (363)
Q Consensus       204 k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~i~v~D~a~a~~~~~~~~  280 (363)
                      |+..+.....   .  +.+++++||+.+||+ ..   .++..+  ....+.++ ..+++.+++++++|+|++++.+++++
T Consensus       141 K~~~E~~~~~---~--~~~~~~lR~~~v~G~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~  211 (292)
T 1vl0_A          141 KLEGENFVKA---L--NPKYYIVRTAWLYGD-GN---NFVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVIDEK  211 (292)
T ss_dssp             HHHHHHHHHH---H--CSSEEEEEECSEESS-SS---CHHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHh---h--CCCeEEEeeeeeeCC-Cc---ChHHHHHHHHhcCCcEEeecCeeeCCccHHHHHHHHHHHHhcC
Confidence            5433333322   1  347999999999999 32   222222  22334443 23357789999999999999999876


Q ss_pred             CCCceEEeeCCCCcCHHHHHHHHHHHhCCCCC-CCCcHHHHHHHhccCceeeecCcccChhhHHH-cCCCcccccHHHHH
Q 017977          281 SYRGVINGTAPNPVRLAEMCDHLGNVLGRPSW-LPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYRYVKDAL  358 (363)
Q Consensus       281 ~~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lG~~p~~~~~~~~l  358 (363)
                       .+++||+++++++++.|+++.+.+.+|.+.. .++|.+...    . .........++++|+++ |||+|+ + ++++|
T Consensus       212 -~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~----~-~~~~~~~~~~d~~k~~~~lG~~p~-~-~~~~l  283 (292)
T 1vl0_A          212 -NYGTFHCTCKGICSWYDFAVEIFRLTGIDVKVTPCTTEEFP----R-PAKRPKYSVLRNYMLELTTGDITR-E-WKESL  283 (292)
T ss_dssp             -CCEEEECCCBSCEEHHHHHHHHHHHHCCCCEEEEECSTTSC----C-SSCCCSBCCBCCHHHHHTTCCCCC-B-HHHHH
T ss_pred             -CCcEEEecCCCCccHHHHHHHHHHHhCCCCceeeccccccC----c-ccCCCccccccHHHHHHHcCCCCC-C-HHHHH
Confidence             5679999999999999999999999998632 122221110    0 00011345678999976 899998 5 99999


Q ss_pred             HHHhC
Q 017977          359 KAIMS  363 (363)
Q Consensus       359 ~~~~~  363 (363)
                      +++++
T Consensus       284 ~~~~~  288 (292)
T 1vl0_A          284 KEYID  288 (292)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            98863

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=100.00  E-value=1.6e-34  Score=261.89  Aligned_cols=292  Identities=13%  Similarity=0.068  Sum_probs=207.2

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCC-------CEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc-CCCE
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADN-------HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-GSTA  119 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~d~  119 (363)
                      ..+|+||||||+||||++|+++|+++|       ++|++++|+.......  ......+..+|+.|.+++.++++ ++|+
T Consensus        12 ~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~~d~   89 (342)
T 2hrz_A           12 FQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAG--FSGAVDARAADLSAPGEAEKLVEARPDV   89 (342)
T ss_dssp             CSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCTT--CCSEEEEEECCTTSTTHHHHHHHTCCSE
T ss_pred             ccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCccccc--cCCceeEEEcCCCCHHHHHHHHhcCCCE
Confidence            345799999999999999999999999       8999999987543221  11112244579999999999884 8999


Q ss_pred             EEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCC-----CCCeEEEeccceecC---CcccccccCCCcchh
Q 017977          120 VVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEG-----VRPSVLELVKPKYLM---RAAHQEMITWLSDYC  191 (363)
Q Consensus       120 Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~~~~v~~SS~~~~yg---~~~~~e~~~~~~~~~  191 (363)
                      |||+|+...  ......+...+++|+.++.++++++.+  .+     ++++|++||. ++|+   ..+++|+.+..+.  
T Consensus        90 vih~A~~~~--~~~~~~~~~~~~~nv~g~~~l~~~~~~--~~~~~~~~~~iv~~SS~-~~~~~~~~~~~~E~~~~~~~--  162 (342)
T 2hrz_A           90 IFHLAAIVS--GEAELDFDKGYRINLDGTRYLFDAIRI--ANGKDGYKPRVVFTSSI-AVFGAPLPYPIPDEFHTTPL--  162 (342)
T ss_dssp             EEECCCCCH--HHHHHCHHHHHHHHTHHHHHHHHHHHH--HHHHHCCCCEEEEEEEG-GGCCSSCCSSBCTTCCCCCS--
T ss_pred             EEECCccCc--ccccccHHHHHHHHHHHHHHHHHHHHh--cccccCCCcEEEEeCch-HhhCCCCCCCcCCCCCCCCc--
Confidence            999999642  112345678899999999999999998  55     7899999999 8888   3467777664321  


Q ss_pred             hhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEe-CCCC--cccchHHHH--HHHhCCCC---CCCCCcccc
Q 017977          192 AKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLG-KDGG--ALAKMIPLF--MMFAGGPL---GSGQQWFSW  263 (363)
Q Consensus       192 ~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g-~~~~--~~~~~~~~~--~~~~~~~~---~~~~~~~~~  263 (363)
                            ..|+.+|+..+.+...... ..+++.+++|++.+|| |+..  ....++..+  ....+.++   ..++..+++
T Consensus       163 ------~~Y~~sK~~~e~~~~~~~~-~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (342)
T 2hrz_A          163 ------TSYGTQKAICELLLSDYSR-RGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHWH  235 (342)
T ss_dssp             ------SHHHHHHHHHHHHHHHHHH-TTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCEEEE
T ss_pred             ------chHHHHHHHHHHHHHHHHH-hcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccCCCccceee
Confidence                  2255556555555444333 3479999999999998 5432  112333332  33445442   344566779


Q ss_pred             ccHHHHHHHHHHHhcCCC----CCceEEeeCCCCcCHHHHHHHHHHHhCCCC--CC-CCcHHHHHHHhccCceeeecCcc
Q 017977          264 IHLDDIVNLIYEALSNPS----YRGVINGTAPNPVRLAEMCDHLGNVLGRPS--WL-PVPEFALKAVLGEGAFVVLEGQR  336 (363)
Q Consensus       264 i~v~D~a~a~~~~~~~~~----~~g~~~i~~~~~~s~~el~~~i~~~~g~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~  336 (363)
                      ++++|+|++++.+++.+.    .+++||++ ++++++.|+++.+.+.+|.+.  .+ ..|..........      ....
T Consensus       236 ~~v~Dva~~~~~~~~~~~~~~~~~~~~ni~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~------~~~~  308 (342)
T 2hrz_A          236 ASPRSAVGFLIHGAMIDVEKVGPRRNLSMP-GLSATVGEQIEALRKVAGEKAVALIRREPNEMIMRMCEG------WAPG  308 (342)
T ss_dssp             ECHHHHHHHHHHHHHSCHHHHCSCCEEECC-CEEEEHHHHHHHHHHHHCHHHHTTEEECCCHHHHHHHTT------SCCC
T ss_pred             EehHHHHHHHHHHHhccccccCCccEEEcC-CCCCCHHHHHHHHHHHcCcccccceeeccCcchhhhhcc------cccc
Confidence            999999999999998753    35699996 467999999999999999752  11 1121111111111      1134


Q ss_pred             cChhhHHHcCCCcccccHHHHHHHHhC
Q 017977          337 VVPARAKELGFPFKYRYVKDALKAIMS  363 (363)
Q Consensus       337 ~~~~k~~~lG~~p~~~~~~~~l~~~~~  363 (363)
                      ++++|+++|||+|+++ ++|+|+++++
T Consensus       309 ~d~~k~~~lG~~p~~~-l~e~l~~~~~  334 (342)
T 2hrz_A          309 FEAKRARELGFTAESS-FEEIIQVHIE  334 (342)
T ss_dssp             BCCHHHHHTTCCCCSS-HHHHHHHHHH
T ss_pred             cChHHHHHcCCCCCCC-HHHHHHHHHH
Confidence            6899997799999986 9999999863

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=100.00  E-value=1.2e-34  Score=259.80  Aligned_cols=282  Identities=12%  Similarity=0.128  Sum_probs=201.0

Q ss_pred             EEEEecCcchHHHHHHHHHHhC--CCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc--CCCEEEEccCCC
Q 017977           52 TVSVTGATGFIGRRLVQRLQAD--NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGTP  127 (363)
Q Consensus        52 ~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~Vi~~a~~~  127 (363)
                      +||||||+||||++|+++|+++  |++|++++|+.....    .   ..+..+|+.|.+++.++++  ++|+|||+|+..
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~----~---~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~   73 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG----G---IKFITLDVSNRDEIDRAVEKYSIDAIFHLAGIL   73 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT----T---CCEEECCTTCHHHHHHHHHHTTCCEEEECCCCC
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc----C---ceEEEecCCCHHHHHHHHhhcCCcEEEECCccc
Confidence            5999999999999999999998  899999999765432    1   1245679999999999888  899999999963


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCC----cccccccCCCcchhhhhhhcccchhh
Q 017977          128 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMR----AAHQEMITWLSDYCAKVYCLVSFNRG  203 (363)
Q Consensus       128 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~----~~~~e~~~~~~~~~~~~~~~~~y~~~  203 (363)
                      ..  .....+...+++|+.++.++++++.+  .+++++||+||. ++|+.    .+.+|+.+..+        ...|+.+
T Consensus        74 ~~--~~~~~~~~~~~~n~~~~~~l~~a~~~--~~~~~~v~~SS~-~~~~~~~~~~~~~e~~~~~p--------~~~Y~~s  140 (317)
T 3ajr_A           74 SA--KGEKDPALAYKVNMNGTYNILEAAKQ--HRVEKVVIPSTI-GVFGPETPKNKVPSITITRP--------RTMFGVT  140 (317)
T ss_dssp             HH--HHHHCHHHHHHHHHHHHHHHHHHHHH--TTCCEEEEEEEG-GGCCTTSCSSSBCSSSCCCC--------CSHHHHH
T ss_pred             CC--ccccChHHHhhhhhHHHHHHHHHHHH--cCCCEEEEecCH-HHhCCCCCCCCccccccCCC--------CchHHHH
Confidence            21  12345678899999999999999999  788899999999 88882    23445444221        1224555


Q ss_pred             HHHHHHHHHHHhccCCCceEEEEeeceEEeCCCC----cccchHHHH-HHHhCCC---CCCCCCccccccHHHHHHHHHH
Q 017977          204 VLVCREWEGTALKVNKDVRLALIRIGIVLGKDGG----ALAKMIPLF-MMFAGGP---LGSGQQWFSWIHLDDIVNLIYE  275 (363)
Q Consensus       204 k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~----~~~~~~~~~-~~~~~~~---~~~~~~~~~~i~v~D~a~a~~~  275 (363)
                      |+..+........ ..+++++++||+.+||+...    ....+...+ ....+.+   ++.+++.++++|++|+|++++.
T Consensus       141 K~~~e~~~~~~~~-~~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~  219 (317)
T 3ajr_A          141 KIAAELLGQYYYE-KFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVD  219 (317)
T ss_dssp             HHHHHHHHHHHHH-HHCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH-hcCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHHHHHHHHHH
Confidence            6444444433322 24899999999999997532    112233333 3333333   2567788999999999999999


Q ss_pred             HhcCCCC----CceEEeeCCCCcCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhccCceeeecCcccChhhHHH-cCCCcc
Q 017977          276 ALSNPSY----RGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFK  350 (363)
Q Consensus       276 ~~~~~~~----~g~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lG~~p~  350 (363)
                      +++++..    +++||+++ ..+++.|+++.+.+.+|.......|..  .......     ....++++|+++ |||+|+
T Consensus       220 ~l~~~~~~~~~g~~~~i~~-~~~s~~e~~~~i~~~~~~~~i~~~~~~--~~~~~~~-----~~~~~d~~k~~~~lG~~p~  291 (317)
T 3ajr_A          220 LYEADRDKLVLRNGYNVTA-YTFTPSELYSKIKERIPEFEIEYKEDF--RDKIAAT-----WPESLDSSEASNEWGFSIE  291 (317)
T ss_dssp             HHHCCGGGCSSCSCEECCS-EEECHHHHHHHHHTTCCSCCEEECCCH--HHHHHTT-----SCSCBCCHHHHHHHCCCCC
T ss_pred             HHhCCccccccCceEecCC-ccccHHHHHHHHHHHCCcccccccccc--chhhccc-----cccccCHHHHHHHcCCCCC
Confidence            9987642    36999987 579999999999999984211111211  1101100     124567899964 999999


Q ss_pred             cccHHHHHHHHhC
Q 017977          351 YRYVKDALKAIMS  363 (363)
Q Consensus       351 ~~~~~~~l~~~~~  363 (363)
                      ++ ++++|+++++
T Consensus       292 ~~-~~~~l~~~~~  303 (317)
T 3ajr_A          292 YD-LDRTIDDMID  303 (317)
T ss_dssp             CC-HHHHHHHHHH
T ss_pred             CC-HHHHHHHHHH
Confidence            97 9999998863

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=100.00  E-value=1.2e-34  Score=283.97  Aligned_cols=306  Identities=14%  Similarity=0.145  Sum_probs=213.6

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhC-CCEEEEEeCCCCcccccCCCCCccccCcccccCcch-HHhhccCCCEEEEccC
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQ-WRDCIQGSTAVVNLAG  125 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~d~Vi~~a~  125 (363)
                      .++|+|||||||||||++|+++|+++ |++|++++|+......+..... .....+|+.|.++ +.++++++|+|||+|+
T Consensus       313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~~~~~-v~~v~~Dl~d~~~~~~~~~~~~D~Vih~Aa  391 (660)
T 1z7e_A          313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPH-FHFVEGDISIHSEWIEYHVKKCDVVLPLVA  391 (660)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGTTCTT-EEEEECCTTTCHHHHHHHHHHCSEEEECCC
T ss_pred             ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhccCCc-eEEEECCCCCcHHHHHHhhcCCCEEEECce
Confidence            35679999999999999999999998 8999999998766544322211 2244578888765 7778889999999999


Q ss_pred             CCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC---CcccccccCCCcchhhhhhhcccchh
Q 017977          126 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM---RAAHQEMITWLSDYCAKVYCLVSFNR  202 (363)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg---~~~~~e~~~~~~~~~~~~~~~~~y~~  202 (363)
                      .... .....++...+++|+.++.+++++|.+  .+ +++||+||. ++||   ..+++|+.+..... ......+.|+.
T Consensus       392 ~~~~-~~~~~~~~~~~~~Nv~gt~~ll~aa~~--~~-~r~V~~SS~-~vyg~~~~~~~~E~~~~~~~~-p~~~p~~~Y~~  465 (660)
T 1z7e_A          392 IATP-IEYTRNPLRVFELDFEENLRIIRYCVK--YR-KRIIFPSTS-EVYGMCSDKYFDEDHSNLIVG-PVNKPRWIYSV  465 (660)
T ss_dssp             CCCT-HHHHHSHHHHHHHHTHHHHHHHHHHHH--TT-CEEEEECCG-GGGBTCCSSSBCTTTCCEEEC-CTTCTTHHHHH
T ss_pred             ecCc-cccccCHHHHHHhhhHHHHHHHHHHHH--hC-CEEEEEecH-HHcCCCCCcccCCCccccccC-cccCCCCCcHH
Confidence            7422 112345678899999999999999999  66 889999998 8888   34567766421000 00001123666


Q ss_pred             hHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc-------cchHHHH--HHHhCCCC---CCCCCccccccHHHHH
Q 017977          203 GVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL-------AKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIV  270 (363)
Q Consensus       203 ~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~-------~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~D~a  270 (363)
                      +|+..+......... .+++++++||+++||+.....       ..++..+  ....+.++   +++++.++++|++|+|
T Consensus       466 sK~~~E~~~~~~~~~-~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva  544 (660)
T 1z7e_A          466 SKQLLDRVIWAYGEK-EGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGI  544 (660)
T ss_dssp             HHHHHHHHHHHHHHH-HCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECEEHHHHH
T ss_pred             HHHHHHHHHHHHHHH-cCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEEEEHHHHH
Confidence            665555554443333 389999999999999975321       2233322  34456554   5677889999999999


Q ss_pred             HHHHHHhcCCC---CCceEEeeCCC-CcCHHHHHHHHHHHhCCCC-CCCCcHHH------HHHHhccCceeeecCcccCh
Q 017977          271 NLIYEALSNPS---YRGVINGTAPN-PVRLAEMCDHLGNVLGRPS-WLPVPEFA------LKAVLGEGAFVVLEGQRVVP  339 (363)
Q Consensus       271 ~a~~~~~~~~~---~~g~~~i~~~~-~~s~~el~~~i~~~~g~~~-~~~~~~~~------~~~~~~~~~~~~~~~~~~~~  339 (363)
                      ++++.+++++.   .+++||+++++ ++++.|+++.+.+.+|.+. ...+|.+.      ....++... .......+++
T Consensus       545 ~ai~~~l~~~~~~~~g~~~ni~~~~~~~s~~el~~~i~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~d~  623 (660)
T 1z7e_A          545 EALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGY-QDVEHRKPSI  623 (660)
T ss_dssp             HHHHHHHHCGGGTTTTEEEEECCGGGEEEHHHHHHHHHHHHHHCTTGGGSCCCCCEEEECTHHHHCTTC-CCCSCCCBCC
T ss_pred             HHHHHHHhCccccCCCeEEEECCCCCCcCHHHHHHHHHHHhcCCCcccccCccccccchhccccccccc-cchhhcccCH
Confidence            99999998754   34599999986 8999999999999998652 12222210      000011100 1123456789


Q ss_pred             hhHHH-cCCCcccccHHHHHHHHhC
Q 017977          340 ARAKE-LGFPFKYRYVKDALKAIMS  363 (363)
Q Consensus       340 ~k~~~-lG~~p~~~~~~~~l~~~~~  363 (363)
                      +|+++ |||+|+++ ++++|+++++
T Consensus       624 ~ka~~~LG~~p~~~-l~egl~~~i~  647 (660)
T 1z7e_A          624 RNAHRCLDWEPKID-MQETIDETLD  647 (660)
T ss_dssp             HHHHHHHCCCCCCC-HHHHHHHHHH
T ss_pred             HHHHHhcCCCccCc-HHHHHHHHHH
Confidence            99965 99999997 9999999863

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=100.00  E-value=6.4e-34  Score=257.79  Aligned_cols=299  Identities=15%  Similarity=0.061  Sum_probs=204.6

Q ss_pred             CCCCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCC-----CCccccC-cccccCcchHHhhccCCCE
Q 017977           46 QKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KKTRFFP-GVMIAEEPQWRDCIQGSTA  119 (363)
Q Consensus        46 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~-~~d~~~~~~~~~~~~~~d~  119 (363)
                      ...++|+||||||+||||++|+++|+++|++|++++|+..+...+...     .....+. .+|+.|.+++.++++++|+
T Consensus         7 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~   86 (342)
T 1y1p_A            7 VLPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAG   86 (342)
T ss_dssp             SSCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSE
T ss_pred             cCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCE
Confidence            334567999999999999999999999999999999986543221100     0111133 5799999999999999999


Q ss_pred             EEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC-C------cccccccCCCcchh-
Q 017977          120 VVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM-R------AAHQEMITWLSDYC-  191 (363)
Q Consensus       120 Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg-~------~~~~e~~~~~~~~~-  191 (363)
                      |||+|+....    ...+...+++|+.++.++++++.+. .+++++||+||. ++|+ .      .+++|+.+...... 
T Consensus        87 vih~A~~~~~----~~~~~~~~~~n~~g~~~ll~~~~~~-~~~~~iv~~SS~-~~~~~~~~~~~~~~~~E~~~~~~~~~~  160 (342)
T 1y1p_A           87 VAHIASVVSF----SNKYDEVVTPAIGGTLNALRAAAAT-PSVKRFVLTSST-VSALIPKPNVEGIYLDEKSWNLESIDK  160 (342)
T ss_dssp             EEECCCCCSC----CSCHHHHHHHHHHHHHHHHHHHHTC-TTCCEEEEECCG-GGTCCCCTTCCCCEECTTCCCHHHHHH
T ss_pred             EEEeCCCCCC----CCCHHHHHHHHHHHHHHHHHHHHhC-CCCcEEEEeccH-HHhcCCCCCCCCcccCccccCchhhhh
Confidence            9999997422    1346789999999999999999842 567899999999 6664 2      46677653210000 


Q ss_pred             -------hhhhhcccchhhHHHHHHHHHHHhcc-CCCceEEEEeeceEEeCCCCccc--chHHHH--HHHhCCCC---CC
Q 017977          192 -------AKVYCLVSFNRGVLVCREWEGTALKV-NKDVRLALIRIGIVLGKDGGALA--KMIPLF--MMFAGGPL---GS  256 (363)
Q Consensus       192 -------~~~~~~~~y~~~k~~~~~~~~~~~~~-~~~~~~~ilRp~~v~g~~~~~~~--~~~~~~--~~~~~~~~---~~  256 (363)
                             ......+.|+.+|+..+......... ..+++++++||+++||+......  ..+..+  ....+.++   +.
T Consensus       161 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (342)
T 1y1p_A          161 AKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALAL  240 (342)
T ss_dssp             HHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHT
T ss_pred             hccccccccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCcccccc
Confidence                   00011234777776665554443332 22789999999999999653211  123222  33445543   23


Q ss_pred             CCCccccccHHHHHHHHHHHhcCCCCCceEEeeCCCCcCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhccCceeeecCcc
Q 017977          257 GQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQR  336 (363)
Q Consensus       257 ~~~~~~~i~v~D~a~a~~~~~~~~~~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  336 (363)
                      + +.++++|++|+|++++.+++++...|.+++.+++++++.|+++.+.+.+|.+. ++.+.      ...    ......
T Consensus       241 ~-~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~~g~~~s~~e~~~~i~~~~~~~~-~~~~~------~~~----~~~~~~  308 (342)
T 1y1p_A          241 M-PPQYYVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSKT-FPADF------PDQ----GQDLSK  308 (342)
T ss_dssp             C-CSEEEEEHHHHHHHHHHHHHCTTCCSCEEEECCEEECHHHHHHHHHHHCTTSC-CCCCC------CCC----CCCCCE
T ss_pred             C-CcCCEeEHHHHHHHHHHHHcCcccCCceEEEeCCCCCHHHHHHHHHHHCCCcc-CCCCC------Ccc----cccccc
Confidence            3 56899999999999999998765556444566678999999999999999751 22110      000    012355


Q ss_pred             cChhhHHH-cCC---CcccccHHHHHHHHhC
Q 017977          337 VVPARAKE-LGF---PFKYRYVKDALKAIMS  363 (363)
Q Consensus       337 ~~~~k~~~-lG~---~p~~~~~~~~l~~~~~  363 (363)
                      ++++|+++ |||   .+..+ ++++|+++++
T Consensus       309 ~d~~k~~~~lg~~~~~~~~~-l~~~l~~~~~  338 (342)
T 1y1p_A          309 FDTAPSLEILKSLGRPGWRS-IEESIKDLVG  338 (342)
T ss_dssp             ECCHHHHHHHHHTTCCSCCC-HHHHHHHHHC
T ss_pred             CChHHHHHHHhhcccCCcCC-HHHHHHHHHH
Confidence            68899965 777   45454 9999999875

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=100.00  E-value=1e-33  Score=279.65  Aligned_cols=294  Identities=18%  Similarity=0.168  Sum_probs=206.0

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccc----cCC-CCCccccCcccccCcchHHhhcc--CCCEE
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL----IFP-GKKTRFFPGVMIAEEPQWRDCIQ--GSTAV  120 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~-~~~~~~~~~~d~~~~~~~~~~~~--~~d~V  120 (363)
                      .++|+||||||+||||++|+++|+++|++|++++|+......    +.. .........+|+.|.+++.++++  ++|+|
T Consensus         9 ~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~D~V   88 (699)
T 1z45_A            9 STSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSV   88 (699)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEE
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhCCCCEE
Confidence            345799999999999999999999999999999997654211    000 00111245679999999999888  89999


Q ss_pred             EEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCC-------cccccccCCCcchhhh
Q 017977          121 VNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMR-------AAHQEMITWLSDYCAK  193 (363)
Q Consensus       121 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~-------~~~~e~~~~~~~~~~~  193 (363)
                      ||+|+.... ......+...+++|+.++.+++++|++  .+++++|++||. ++||.       .+++|+.+..+     
T Consensus        89 ih~A~~~~~-~~~~~~~~~~~~~Nv~gt~~ll~a~~~--~~~~~iV~~SS~-~vyg~~~~~~~~~~~~E~~~~~p-----  159 (699)
T 1z45_A           89 IHFAGLKAV-GESTQIPLRYYHNNILGTVVLLELMQQ--YNVSKFVFSSSA-TVYGDATRFPNMIPIPEECPLGP-----  159 (699)
T ss_dssp             EECCSCCCH-HHHHHSHHHHHHHHHHHHHHHHHHHHH--HTCCEEEEEEEG-GGGCCGGGSTTCCSBCTTSCCCC-----
T ss_pred             EECCcccCc-CccccCHHHHHHHHHHHHHHHHHHHHH--cCCCEEEEECcH-HHhCCCccccccCCccccCCCCC-----
Confidence            999997421 112234567899999999999999998  788899999998 88882       34556544321     


Q ss_pred             hhhcccchhhHHHHHHHHHHHhccC-CCceEEEEeeceEEeCCCCc---------ccchHHHH-HHHhC--CCC---C--
Q 017977          194 VYCLVSFNRGVLVCREWEGTALKVN-KDVRLALIRIGIVLGKDGGA---------LAKMIPLF-MMFAG--GPL---G--  255 (363)
Q Consensus       194 ~~~~~~y~~~k~~~~~~~~~~~~~~-~~~~~~ilRp~~v~g~~~~~---------~~~~~~~~-~~~~~--~~~---~--  255 (363)
                         ...|+.+|+..+.......... .+++++++||+++||+....         ...+++.+ ....+  .++   +  
T Consensus       160 ---~~~Y~~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  236 (699)
T 1z45_A          160 ---TNPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDD  236 (699)
T ss_dssp             ---CSHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC---
T ss_pred             ---CChHHHHHHHHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCc
Confidence               1235555655555444433321 48999999999999985311         12344443 22222  232   3  


Q ss_pred             ----CCCCccccccHHHHHHHHHHHhcCC------C-CCceEEeeCCCCcCHHHHHHHHHHHhCCCCCCCCcHHHHHHHh
Q 017977          256 ----SGQQWFSWIHLDDIVNLIYEALSNP------S-YRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVL  324 (363)
Q Consensus       256 ----~~~~~~~~i~v~D~a~a~~~~~~~~------~-~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~  324 (363)
                          ++.+.+++||++|+|++++.+++..      . .+++||+++++++++.|+++.+.+.+|.+..+....    ...
T Consensus       237 ~~~~~g~~~~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~----~~~  312 (699)
T 1z45_A          237 YDSRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYKVTG----RRA  312 (699)
T ss_dssp             ---CCSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCCC-----------
T ss_pred             ccCCCCCeeEeeEEHHHHHHHHHHHHhhhhccccccCCceEEEECCCCCCcHHHHHHHHHHHhCCCCCceecC----CCC
Confidence                5678899999999999999988632      2 245999999999999999999999999874322111    001


Q ss_pred             ccCceeeecCcccChhhHH-HcCCCcccccHHHHHHHHhC
Q 017977          325 GEGAFVVLEGQRVVPARAK-ELGFPFKYRYVKDALKAIMS  363 (363)
Q Consensus       325 ~~~~~~~~~~~~~~~~k~~-~lG~~p~~~~~~~~l~~~~~  363 (363)
                      ++     .....++++|++ +|||+|+++ ++|+|+++++
T Consensus       313 ~~-----~~~~~~d~~ka~~~LG~~p~~~-l~egl~~~~~  346 (699)
T 1z45_A          313 GD-----VLNLTAKPDRAKRELKWQTELQ-VEDSCKDLWK  346 (699)
T ss_dssp             -------CCCCCBCCHHHHHHTCCCCCCC-HHHHHHHHHH
T ss_pred             Cc-----cccccCCHHHHHHhcCCCCCCC-HHHHHHHHHH
Confidence            11     134567889996 599999997 9999999863

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=5e-32  Score=231.08  Aligned_cols=223  Identities=11%  Similarity=0.071  Sum_probs=158.8

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCCCC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPI  128 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~~~  128 (363)
                      .||+|||||||||||++|+++|+++|++|++++|++.+...+..   ......+|+.|.+++.++++++|+|||+|+...
T Consensus         3 ~m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~~   79 (227)
T 3dhn_A            3 KVKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIENE---HLKVKKADVSSLDEVCEVCKGADAVISAFNPGW   79 (227)
T ss_dssp             CCCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCCT---TEEEECCCTTCHHHHHHHHTTCSEEEECCCC--
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhccC---ceEEEEecCCCHHHHHHHhcCCCEEEEeCcCCC
Confidence            46899999999999999999999999999999999876554322   222556899999999999999999999998631


Q ss_pred             CCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC-CcccccccCCCcchhhhhhhcccchhhHHHH
Q 017977          129 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM-RAAHQEMITWLSDYCAKVYCLVSFNRGVLVC  207 (363)
Q Consensus       129 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg-~~~~~e~~~~~~~~~~~~~~~~~y~~~k~~~  207 (363)
                             ....++++|+.++.++++++.+  .+++++||+||.+..++ .....++.+..+        ...|..+|+..
T Consensus        80 -------~~~~~~~~n~~~~~~l~~~~~~--~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~p--------~~~Y~~sK~~~  142 (227)
T 3dhn_A           80 -------NNPDIYDETIKVYLTIIDGVKK--AGVNRFLMVGGAGSLFIAPGLRLMDSGEVP--------ENILPGVKALG  142 (227)
T ss_dssp             -----------CCSHHHHHHHHHHHHHHH--TTCSEEEEECCSTTSEEETTEEGGGTTCSC--------GGGHHHHHHHH
T ss_pred             -------CChhHHHHHHHHHHHHHHHHHH--hCCCEEEEeCChhhccCCCCCccccCCcch--------HHHHHHHHHHH
Confidence                   1123778899999999999999  78889999999943333 222233333211        12244555444


Q ss_pred             HHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHHHHHhcCCCC-CceE
Q 017977          208 REWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSY-RGVI  286 (363)
Q Consensus       208 ~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~-~g~~  286 (363)
                      +.... .+....+++++++||+.+||+..... .+.    .....++..++. +++++++|+|++++.+++++.. +++|
T Consensus       143 e~~~~-~~~~~~~~~~~ilrp~~v~g~~~~~~-~~~----~~~~~~~~~~~~-~~~i~~~Dva~ai~~~l~~~~~~g~~~  215 (227)
T 3dhn_A          143 EFYLN-FLMKEKEIDWVFFSPAADMRPGVRTG-RYR----LGKDDMIVDIVG-NSHISVEDYAAAMIDELEHPKHHQERF  215 (227)
T ss_dssp             HHHHH-TGGGCCSSEEEEEECCSEEESCCCCC-CCE----EESSBCCCCTTS-CCEEEHHHHHHHHHHHHHSCCCCSEEE
T ss_pred             HHHHH-HHhhccCccEEEEeCCcccCCCcccc-cee----ecCCCcccCCCC-CcEEeHHHHHHHHHHHHhCccccCcEE
Confidence            43333 33334599999999999999975321 111    112222222232 7899999999999999999884 4599


Q ss_pred             EeeCCCCcCHHH
Q 017977          287 NGTAPNPVRLAE  298 (363)
Q Consensus       287 ~i~~~~~~s~~e  298 (363)
                      +++++++.+|++
T Consensus       216 ~~~~~~~~~~~~  227 (227)
T 3dhn_A          216 TIGYLEHHHHHH  227 (227)
T ss_dssp             EEECCSCCC---
T ss_pred             EEEeehhcccCC
Confidence            999999988863

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.98  E-value=1.3e-32  Score=241.33  Aligned_cols=263  Identities=16%  Similarity=0.105  Sum_probs=187.7

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccC--CCEEEEccCCCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQG--STAVVNLAGTPI  128 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--~d~Vi~~a~~~~  128 (363)
                      |+|+||||+||||++++++|++ |++|++++|++...     . .    ..+|+.|.+++.+++++  +|+|||+|+...
T Consensus         1 m~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~~~-----~-~----~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~   69 (273)
T 2ggs_A            1 MRTLITGASGQLGIELSRLLSE-RHEVIKVYNSSEIQ-----G-G----YKLDLTDFPRLEDFIIKKRPDVIINAAAMTD   69 (273)
T ss_dssp             CCEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSCCT-----T-C----EECCTTSHHHHHHHHHHHCCSEEEECCCCCC
T ss_pred             CEEEEECCCChhHHHHHHHHhc-CCeEEEecCCCcCC-----C-C----ceeccCCHHHHHHHHHhcCCCEEEECCcccC
Confidence            5899999999999999999995 89999999987421     1 1    45799999999998886  999999999642


Q ss_pred             CCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC--CcccccccCCCcchhhhhhhcccchhhHHH
Q 017977          129 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM--RAAHQEMITWLSDYCAKVYCLVSFNRGVLV  206 (363)
Q Consensus       129 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg--~~~~~e~~~~~~~~~~~~~~~~~y~~~k~~  206 (363)
                      . .......+..+++|+.++.++++++.+  .+. ++|++||. ++|+  ..+++|+.+..+.        ..|+.+|..
T Consensus        70 ~-~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~-~iv~~SS~-~~~~~~~~~~~e~~~~~~~--------~~Y~~sK~~  136 (273)
T 2ggs_A           70 V-DKCEIEKEKAYKINAEAVRHIVRAGKV--IDS-YIVHISTD-YVFDGEKGNYKEEDIPNPI--------NYYGLSKLL  136 (273)
T ss_dssp             H-HHHHHCHHHHHHHHTHHHHHHHHHHHH--TTC-EEEEEEEG-GGSCSSSCSBCTTSCCCCS--------SHHHHHHHH
T ss_pred             h-hhhhhCHHHHHHHhHHHHHHHHHHHHH--hCC-eEEEEecc-eeEcCCCCCcCCCCCCCCC--------CHHHHHHHH
Confidence            1 112345678999999999999999998  666 79999999 7787  3467777654321        123333432


Q ss_pred             HHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHH--HHHhCCCC-CCCCCccccccHHHHHHHHHHHhcCCCCC
Q 017977          207 CREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL-GSGQQWFSWIHLDDIVNLIYEALSNPSYR  283 (363)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~i~v~D~a~a~~~~~~~~~~~  283 (363)
                      .   +.....    ++++++||+.+||+.     .+...+  ....+.++ ..++ .+++++++|+|++++.+++++. .
T Consensus       137 ~---e~~~~~----~~~~~iR~~~v~G~~-----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dva~~i~~~~~~~~-~  202 (273)
T 2ggs_A          137 G---ETFALQ----DDSLIIRTSGIFRNK-----GFPIYVYKTLKEGKTVFAFKG-YYSPISARKLASAILELLELRK-T  202 (273)
T ss_dssp             H---HHHHCC----TTCEEEEECCCBSSS-----SHHHHHHHHHHTTCCEEEESC-EECCCBHHHHHHHHHHHHHHTC-C
T ss_pred             H---HHHHhC----CCeEEEecccccccc-----HHHHHHHHHHHcCCCEEeecC-CCCceEHHHHHHHHHHHHhcCc-C
Confidence            2   222221    678999999999831     222222  22334433 1122 6789999999999999998764 6


Q ss_pred             ceEEeeCCCCcCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhccCceeeecCcccChhhHHH-cCCCc-ccccHHHHH
Q 017977          284 GVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPF-KYRYVKDAL  358 (363)
Q Consensus       284 g~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lG~~p-~~~~~~~~l  358 (363)
                      |+||+++ +.+++.|+++.+.+.+|.+..+..+.+..     ........+..++++|+++ |||+| .++ +++++
T Consensus       203 g~~~i~~-~~~s~~e~~~~~~~~~g~~~~~~~~~~~~-----~~~~~~~~~~~~d~~k~~~~lG~~p~~~~-l~~~~  272 (273)
T 2ggs_A          203 GIIHVAG-ERISRFELALKIKEKFNLPGEVKEVDEVR-----GWIAKRPYDSSLDSSRARKILSTDFYTLD-LDGMV  272 (273)
T ss_dssp             EEEECCC-CCEEHHHHHHHHHHHTTCCSCEEEESSCT-----TCCSCCCSBCCBCCHHHHHHCSSCCCSCC-GGGCC
T ss_pred             CeEEECC-CcccHHHHHHHHHHHhCCChhhccccccc-----ccccCCCcccccCHHHHHHHhCCCCCCcc-ccccc
Confidence            7999999 99999999999999999874322221100     0001112345678999975 99999 465 88875

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.98  E-value=1.3e-31  Score=236.76  Aligned_cols=266  Identities=15%  Similarity=0.133  Sum_probs=188.3

Q ss_pred             cEEEEecCcchHHHHHHHHHHhC--CCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCCCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQAD--NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPI  128 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~~~  128 (363)
                      |+|||||||||||++++++|+++  |++|++++|++.+...+...  ......+|+.|.+++.++++++|+|||+|+.. 
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~--~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~-   77 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQ--GVEVRHGDYNQPESLQKAFAGVSKLLFISGPH-   77 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHT--TCEEEECCTTCHHHHHHHTTTCSEEEECCCCC-
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhc--CCeEEEeccCCHHHHHHHHhcCCEEEEcCCCC-
Confidence            57999999999999999999998  99999999987654332111  11244679999999999999999999999852 


Q ss_pred             CCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhcccchhhHHHHH
Q 017977          129 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRGVLVCR  208 (363)
Q Consensus       129 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~~y~~~k~~~~  208 (363)
                         ...       ++|+.++.++++++.+  .+++++||+||. ++|+       .+  ..|          ..+|+..+
T Consensus        78 ---~~~-------~~n~~~~~~l~~a~~~--~~~~~~v~~Ss~-~~~~-------~~--~~y----------~~~K~~~E  125 (287)
T 2jl1_A           78 ---YDN-------TLLIVQHANVVKAARD--AGVKHIAYTGYA-FAEE-------SI--IPL----------AHVHLATE  125 (287)
T ss_dssp             ---SCH-------HHHHHHHHHHHHHHHH--TTCSEEEEEEET-TGGG-------CC--STH----------HHHHHHHH
T ss_pred             ---cCc-------hHHHHHHHHHHHHHHH--cCCCEEEEECCC-CCCC-------CC--Cch----------HHHHHHHH
Confidence               111       5799999999999999  789999999998 4432       11  133          33343333


Q ss_pred             HHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCC-CCCCCCccccccHHHHHHHHHHHhcCCCC-CceE
Q 017977          209 EWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGP-LGSGQQWFSWIHLDDIVNLIYEALSNPSY-RGVI  286 (363)
Q Consensus       209 ~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~v~D~a~a~~~~~~~~~~-~g~~  286 (363)
                      ....     ..+++++++||+.++|+...   .++.... ..+.. ...++..+++++++|+|++++.+++++.. +++|
T Consensus       126 ~~~~-----~~~~~~~ilrp~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~  196 (287)
T 2jl1_A          126 YAIR-----TTNIPYTFLRNALYTDFFVN---EGLRAST-ESGAIVTNAGSGIVNSVTRNELALAAATVLTEEGHENKTY  196 (287)
T ss_dssp             HHHH-----HTTCCEEEEEECCBHHHHSS---GGGHHHH-HHTEEEESCTTCCBCCBCHHHHHHHHHHHHTSSSCTTEEE
T ss_pred             HHHH-----HcCCCeEEEECCEeccccch---hhHHHHh-hCCceeccCCCCccCccCHHHHHHHHHHHhcCCCCCCcEE
Confidence            3221     24899999999988876411   1121111 12222 24567788999999999999999987653 4599


Q ss_pred             EeeCCCCcCHHHHHHHHHHHhCCCCC-CCCcHHHHHHHh---ccCce---e-------e-ecCcccChhhHHH-cCCCcc
Q 017977          287 NGTAPNPVRLAEMCDHLGNVLGRPSW-LPVPEFALKAVL---GEGAF---V-------V-LEGQRVVPARAKE-LGFPFK  350 (363)
Q Consensus       287 ~i~~~~~~s~~el~~~i~~~~g~~~~-~~~~~~~~~~~~---~~~~~---~-------~-~~~~~~~~~k~~~-lG~~p~  350 (363)
                      |+++++.+|+.|+++.+.+.+|++.. .++|.+......   +....   .       . ......+++|+++ ||  |.
T Consensus       197 ~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG--~~  274 (287)
T 2jl1_A          197 NLVSNQPWTFDELAQILSEVSGKKVVHQPVSFEEEKNFLVNAGVPEPFTEITAAIYDAISKGEASKTSDDLQKLIG--SL  274 (287)
T ss_dssp             EECCSSCBCHHHHHHHHHHHHSSCCEEEECCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHS--SC
T ss_pred             EecCCCcCCHHHHHHHHHHHHCCcceEEeCCHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCCCcCCchHHHHHhC--CC
Confidence            99999999999999999999998733 355554433221   10000   0       0 0223456788865 89  66


Q ss_pred             cccHHHHHHHHhC
Q 017977          351 YRYVKDALKAIMS  363 (363)
Q Consensus       351 ~~~~~~~l~~~~~  363 (363)
                      .+ ++|+|+++++
T Consensus       275 ~~-l~e~l~~~~~  286 (287)
T 2jl1_A          275 TP-LKETVKQALK  286 (287)
T ss_dssp             CC-HHHHHHHHHT
T ss_pred             CC-HHHHHHHHhc
Confidence            65 9999999875

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.98  E-value=7.7e-32  Score=251.37  Aligned_cols=299  Identities=9%  Similarity=0.037  Sum_probs=198.0

Q ss_pred             CCCCCCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccc---cCC-------------CCCccccCcccccCc
Q 017977           44 HTQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL---IFP-------------GKKTRFFPGVMIAEE  107 (363)
Q Consensus        44 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~~-------------~~~~~~~~~~d~~~~  107 (363)
                      .+....+|+|||||||||||++|+++|++.|++|++++|+......   +..             .........+|+.|.
T Consensus        63 ~~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~  142 (427)
T 4f6c_A           63 SLSHRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECM  142 (427)
T ss_dssp             SSCCCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---
T ss_pred             cCCCCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCc
Confidence            3444567899999999999999999999999999999999872110   000             001112445799888


Q ss_pred             chHHhhccCCCEEEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC--------Ccc
Q 017977          108 PQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM--------RAA  179 (363)
Q Consensus       108 ~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg--------~~~  179 (363)
                      +.+. .+.++|+|||+|+...    ........+++|+.++.+++++|.+   ++++|||+||. ++ |        ..+
T Consensus       143 ~~l~-~~~~~d~Vih~A~~~~----~~~~~~~~~~~Nv~g~~~l~~aa~~---~~~~~v~~SS~-~~-G~~~~~~~~~~~  212 (427)
T 4f6c_A          143 DDVV-LPENMDTIIHAGARTD----HFGDDDEFEKVNVQGTVDVIRLAQQ---HHARLIYVSTI-SV-GTYFDIDTEDVT  212 (427)
T ss_dssp             CCCC-CSSCCSEEEECCCCC-----------CHHHHHHHHHHHHHHHHHH---TTCEEEEEEEG-GG-GSEECSSCSCCE
T ss_pred             ccCC-CcCCCCEEEECCcccC----CCCCHHHHHHHHHHHHHHHHHHHHh---cCCcEEEECch-Hh-CCCccCCCCCcc
Confidence            8787 7789999999999742    2344678899999999999999998   56789999999 55 4        346


Q ss_pred             cccccCCCcchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc------cchHHH-H-HHHhC
Q 017977          180 HQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL------AKMIPL-F-MMFAG  251 (363)
Q Consensus       180 ~~e~~~~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~------~~~~~~-~-~~~~~  251 (363)
                      ++|+.+.....     ....|+.+|+..+....... . .|++++++||++|||+.....      ..++.. + ....+
T Consensus       213 ~~E~~~~~~~~-----~~~~Y~~sK~~~E~~~~~~~-~-~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (427)
T 4f6c_A          213 FSEADVYKGQL-----LTSPYTRSKFYSELKVLEAV-N-NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQL  285 (427)
T ss_dssp             ECTTCSCSSCC-----CCSHHHHHHHHHHHHHHHHH-H-TTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHS
T ss_pred             ccccccccCCC-----CCCchHHHHHHHHHHHHHHH-H-cCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhc
Confidence            66666522110     12336666766655555433 2 489999999999999975432      112222 2 33344


Q ss_pred             CCC--CCCCCccccccHHHHHHHHHHHhcCCCCCceEEeeCCCCcCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhccCce
Q 017977          252 GPL--GSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAF  329 (363)
Q Consensus       252 ~~~--~~~~~~~~~i~v~D~a~a~~~~~~~~~~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~  329 (363)
                      .++  +.++..+++++++|+|++++.++.++..+++||+++++++++.|+++.+.+ +| -..++.++|.....-.....
T Consensus       286 ~~~~~~~~~~~~~~v~v~DvA~ai~~~~~~~~~g~~~~l~~~~~~s~~el~~~i~~-~g-~~~~~~~~~~~~l~~~~~~~  363 (427)
T 4f6c_A          286 DCIGVSMAEMPVDFSFVDTTARQIVALAQVNTPQIIYHVLSPNKMPVKSLLECVKR-KE-IELVSDESFNEILQKQDMYE  363 (427)
T ss_dssp             SEEEHHHHTCEECCEEHHHHHHHHHHHTTSCCCCSEEEESCSCCEEHHHHHHHHHS-SC-CEEECHHHHHHHHHHTTCHH
T ss_pred             CCCCCccccceEEEeeHHHHHHHHHHHHcCCCCCCEEEecCCCCCcHHHHHHHHHH-cC-CcccCHHHHHHHHHhcCchh
Confidence            444  335788999999999999999998877666999999999999999999999 66 33345555554332110000


Q ss_pred             ---e-----eecCcccCh----hhHHHcCCCcccccHHHHHHHHh
Q 017977          330 ---V-----VLEGQRVVP----ARAKELGFPFKYRYVKDALKAIM  362 (363)
Q Consensus       330 ---~-----~~~~~~~~~----~k~~~lG~~p~~~~~~~~l~~~~  362 (363)
                         +     ......++.    .+++++||.+... -++.+++++
T Consensus       364 ~~~~~~~~~~~~~~~~d~~~~~~~l~~~G~~~~~~-~~~~l~~~~  407 (427)
T 4f6c_A          364 TIGLTSVDREQQLAMIDTTLTLKIMNHISEKWPTI-TNNWLYHWA  407 (427)
T ss_dssp             HHHHHHHHHTSEECEECCHHHHHHHHHTTCCCCCC-CHHHHHHHH
T ss_pred             hhhhhhccccCCceeccHHHHHHHHHhcCCCCCCC-CHHHHHHHH
Confidence               0     001122333    3345689987643 466777664

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.97  E-value=1.1e-31  Score=255.57  Aligned_cols=297  Identities=9%  Similarity=0.027  Sum_probs=201.0

Q ss_pred             CCCCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccC----------------CCCCccccCcccccCcch
Q 017977           46 QKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----------------PGKKTRFFPGVMIAEEPQ  109 (363)
Q Consensus        46 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----------------~~~~~~~~~~~d~~~~~~  109 (363)
                      ...++|+|||||||||||++|+++|++.|++|++++|+..+.....                .......+..+|+.+.+.
T Consensus       146 ~~~~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~  225 (508)
T 4f6l_B          146 SHRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDD  225 (508)
T ss_dssp             CBCCCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSS
T ss_pred             ccCCCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCccccc
Confidence            4455789999999999999999999999999999999987321000                000112245579988787


Q ss_pred             HHhhccCCCEEEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC--------Ccccc
Q 017977          110 WRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM--------RAAHQ  181 (363)
Q Consensus       110 ~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg--------~~~~~  181 (363)
                      +. ...++|+|||+|+...    .......++++|+.++.+++++|.+   +.+++||+||. ++ |        ..+++
T Consensus       226 l~-~~~~~D~Vih~Aa~~~----~~~~~~~~~~~Nv~gt~~ll~~a~~---~~~~~v~iSS~-~v-G~~~~~~~~~~~~~  295 (508)
T 4f6l_B          226 VV-LPENMDTIIHAGARTD----HFGDDDEFEKVNVQGTVDVIRLAQQ---HHARLIYVSTI-SV-GTYFDIDTEDVTFS  295 (508)
T ss_dssp             CC-CSSCCSEEEECCCC------------CCHHHHHHHHHHHHHHHHT---TTCEEEEEEES-CT-TSEECTTCSCCEEC
T ss_pred             CC-CccCCCEEEECCceec----CCCCHHHHhhhHHHHHHHHHHHHHh---CCCcEEEeCCh-hh-ccCCccCCcCcccc
Confidence            87 7789999999999742    2234567889999999999999998   46789999999 66 3        34566


Q ss_pred             cccCCCcchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc------cchH-HHH-HHHhCCC
Q 017977          182 EMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL------AKMI-PLF-MMFAGGP  253 (363)
Q Consensus       182 e~~~~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~------~~~~-~~~-~~~~~~~  253 (363)
                      |+++.....     ....|+.+|+..+....... . .|++++|+||+.|||+.....      ..++ ..+ .......
T Consensus       296 E~~~~~~~~-----~~~~Y~~sK~~~E~~~~~~~-~-~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~  368 (508)
T 4f6l_B          296 EADVYKGQL-----LTSPYTRSKFYSELKVLEAV-N-NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDC  368 (508)
T ss_dssp             TTCSCSSBC-----CCSHHHHHHHHHHHHHHHHH-H-TTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSE
T ss_pred             ccccccccc-----CCCcHHHHHHHHHHHHHHHH-H-cCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCC
Confidence            666522111     12346777777666655543 2 499999999999999975332      1122 222 2233333


Q ss_pred             C--CCCCCccccccHHHHHHHHHHHhcCCCCCceEEeeCCCCcCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhccCcee-
Q 017977          254 L--GSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFV-  330 (363)
Q Consensus       254 ~--~~~~~~~~~i~v~D~a~a~~~~~~~~~~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~-  330 (363)
                      +  +.+++.+++++++|+|++++.++.++..+++||+++++++++.|+++.+.+..  -..++.++|.....-...... 
T Consensus       369 ~~~~~g~~~~~~v~v~DvA~ai~~~~~~~~~~~~~nl~~~~~~s~~el~~~i~~~~--~~~~~~~~w~~~l~~~~~~~~~  446 (508)
T 4f6l_B          369 IGVSMAEMPVDFSFVDTTARQIVALAQVNTPQIIYHVLSPNKMPVKSLLECVKRKE--IELVSDESFNEILQKQDMYETI  446 (508)
T ss_dssp             EETTGGGSEEECEEHHHHHHHHHHHTTBCCSCSEEEESCSCEEEHHHHHHHHHSSC--CEEECHHHHHHHHHTTCCHHHH
T ss_pred             CCCCccCceEEEEcHHHHHHHHHHHHhCCCCCCEEEeCCCCCCCHHHHHHHHHHcC--CcccCHHHHHHHHHhcCCccch
Confidence            3  34678899999999999999999877766799999999999999999999865  333455666543321000000 


Q ss_pred             -------eecCcccCh----hhHHHcCCCcccccHHHHHHHHh
Q 017977          331 -------VLEGQRVVP----ARAKELGFPFKYRYVKDALKAIM  362 (363)
Q Consensus       331 -------~~~~~~~~~----~k~~~lG~~p~~~~~~~~l~~~~  362 (363)
                             ......++.    .+++++||.+... -++.+++++
T Consensus       447 ~~~~~~~~~~~~~~d~~~~~~~l~~~G~~~~~~-~~~~l~~~~  488 (508)
T 4f6l_B          447 GLTSVDREQQLAMIDTTLTLKIMNHISEKWPTI-TNNWLYHWA  488 (508)
T ss_dssp             HHHHTGGGSEECEECCHHHHHHHHHHSCCCCCC-CHHHHHHHH
T ss_pred             hcccccccCcceecchHHHHHHHHHcCCCCCCC-CHHHHHHHH
Confidence                   001122333    3456789987754 577777664

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.97  E-value=2.6e-30  Score=228.62  Aligned_cols=264  Identities=14%  Similarity=0.119  Sum_probs=183.9

Q ss_pred             cEEEEecCcchHHHHHHHHHHhC-CCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCCCCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIG  129 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~~~~  129 (363)
                      |+|||||||||||++++++|++. |++|++++|++++...+...  ......+|+.|.+++.++++++|+|||+|+....
T Consensus         1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~--~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~~   78 (289)
T 3e48_A            1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRG--KVSVRQLDYFNQESMVEAFKGMDTVVFIPSIIHP   78 (289)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGBT--TBEEEECCTTCHHHHHHHTTTCSEEEECCCCCCS
T ss_pred             CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhhC--CCEEEEcCCCCHHHHHHHHhCCCEEEEeCCCCcc
Confidence            58999999999999999999998 99999999998765543221  1224568999999999999999999999986311


Q ss_pred             CCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhcccchhhHHHHHH
Q 017977          130 TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRGVLVCRE  209 (363)
Q Consensus       130 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~~y~~~k~~~~~  209 (363)
                                 ...|+.++.++++++++  .+++++||+||.+.       .+..    +|...+           ....
T Consensus        79 -----------~~~~~~~~~~l~~aa~~--~gv~~iv~~Ss~~~-------~~~~----~~~~~~-----------~~~~  123 (289)
T 3e48_A           79 -----------SFKRIPEVENLVYAAKQ--SGVAHIIFIGYYAD-------QHNN----PFHMSP-----------YFGY  123 (289)
T ss_dssp             -----------HHHHHHHHHHHHHHHHH--TTCCEEEEEEESCC-------STTC----CSTTHH-----------HHHH
T ss_pred             -----------chhhHHHHHHHHHHHHH--cCCCEEEEEcccCC-------CCCC----CCccch-----------hHHH
Confidence                       12478899999999999  88999999999731       1111    121111           0011


Q ss_pred             HHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHHHHHhcCCCC-CceEEe
Q 017977          210 WEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSY-RGVING  288 (363)
Q Consensus       210 ~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~-~g~~~i  288 (363)
                      .+....  ..|++++++||+.++|+..    .++...........+.++..+++++++|+|++++.++.++.. +++||+
T Consensus       124 ~e~~~~--~~g~~~~ilrp~~~~~~~~----~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~  197 (289)
T 3e48_A          124 ASRLLS--TSGIDYTYVRMAMYMDPLK----PYLPELMNMHKLIYPAGDGRINYITRNDIARGVIAIIKNPDTWGKRYLL  197 (289)
T ss_dssp             HHHHHH--HHCCEEEEEEECEESTTHH----HHHHHHHHHTEECCCCTTCEEEEECHHHHHHHHHHHHHCGGGTTCEEEE
T ss_pred             HHHHHH--HcCCCEEEEeccccccccH----HHHHHHHHCCCEecCCCCceeeeEEHHHHHHHHHHHHcCCCcCCceEEe
Confidence            111111  2389999999999998732    222222111112235678889999999999999999988764 559999


Q ss_pred             eCCCCcCHHHHHHHHHHHhCCCC-CCCCcHHHHHHHhcc-C--cee--------eecCcccChhhHH-HcCCCcccccHH
Q 017977          289 TAPNPVRLAEMCDHLGNVLGRPS-WLPVPEFALKAVLGE-G--AFV--------VLEGQRVVPARAK-ELGFPFKYRYVK  355 (363)
Q Consensus       289 ~~~~~~s~~el~~~i~~~~g~~~-~~~~~~~~~~~~~~~-~--~~~--------~~~~~~~~~~k~~-~lG~~p~~~~~~  355 (363)
                      + ++.+++.|+++.+.+.+|++. ..++|...+...+.. .  ...        ...........++ .+|++|+  +++
T Consensus       198 ~-~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~p~--~~~  274 (289)
T 3e48_A          198 S-GYSYDMKELAAILSEASGTEIKYEPVSLETFAEMYDEPKGFGALLASMYHAGARGLLDQESNDFKQLVNDQPQ--TLQ  274 (289)
T ss_dssp             C-CEEEEHHHHHHHHHHHHTSCCEECCCCHHHHHHHTCCSTTHHHHHHHHHHHHHTTTTCCCCSHHHHHHSSCCC--CHH
T ss_pred             C-CCcCCHHHHHHHHHHHHCCceeEEeCCHHHHHHHhcCCccHHHHHHHHHHHHHCCCccccCchHHHHhCCCCC--CHH
Confidence            9 999999999999999999873 344554444433221 0  000        0111122344554 4899999  699


Q ss_pred             HHHHH
Q 017977          356 DALKA  360 (363)
Q Consensus       356 ~~l~~  360 (363)
                      +.+++
T Consensus       275 ~~~~~  279 (289)
T 3e48_A          275 SFLQE  279 (289)
T ss_dssp             HHHHC
T ss_pred             HHHHH
Confidence            99875

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.97  E-value=1.6e-30  Score=245.22  Aligned_cols=266  Identities=17%  Similarity=0.186  Sum_probs=187.9

Q ss_pred             CCCccEEEEecCcchHHHHHHHHHHhC---CCEEEEEeCCCCccccc------CCC-------------CCccccCcccc
Q 017977           47 KASQMTVSVTGATGFIGRRLVQRLQAD---NHQVRVLTRSRSKAELI------FPG-------------KKTRFFPGVMI  104 (363)
Q Consensus        47 ~~~~~~vlVtGatG~iG~~l~~~L~~~---g~~V~~~~r~~~~~~~~------~~~-------------~~~~~~~~~d~  104 (363)
                      ...+|+|||||||||||++|+++|+++   |++|++++|+.......      ...             ........+|+
T Consensus        70 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl  149 (478)
T 4dqv_A           70 SPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDK  149 (478)
T ss_dssp             CSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCT
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeEC
Confidence            345789999999999999999999998   89999999987643110      000             01112445687


Q ss_pred             c------CcchHHhhccCCCEEEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC--
Q 017977          105 A------EEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM--  176 (363)
Q Consensus       105 ~------~~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg--  176 (363)
                      .      +.+.+.++++++|+|||+|+....     ......+++|+.++.+++++|.+  .++++|||+||. ++|+  
T Consensus       150 ~~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~-----~~~~~~~~~Nv~gt~~ll~aa~~--~~~~~~V~iSS~-~v~~~~  221 (478)
T 4dqv_A          150 SEPDLGLDQPMWRRLAETVDLIVDSAAMVNA-----FPYHELFGPNVAGTAELIRIALT--TKLKPFTYVSTA-DVGAAI  221 (478)
T ss_dssp             TSGGGGCCHHHHHHHHHHCCEEEECCSSCSB-----SSCCEEHHHHHHHHHHHHHHHTS--SSCCCEEEEEEG-GGGTTS
T ss_pred             CCcccCCCHHHHHHHHcCCCEEEECccccCC-----cCHHHHHHHHHHHHHHHHHHHHh--CCCCeEEEEeeh-hhcCcc
Confidence            6      556788888999999999997532     23346788999999999999999  788999999999 8888  


Q ss_pred             -CcccccccCCCcch---hhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCC--C--cccchHHHH--
Q 017977          177 -RAAHQEMITWLSDY---CAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDG--G--ALAKMIPLF--  246 (363)
Q Consensus       177 -~~~~~e~~~~~~~~---~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~--~--~~~~~~~~~--  246 (363)
                       ..+++|+.+..+.-   .........|+.+|+..+.......... |++++++||++|||+..  +  ....++..+  
T Consensus       222 ~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-gi~~~ivRpg~v~G~~~~~g~~~~~~~~~~l~~  300 (478)
T 4dqv_A          222 EPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLC-ALPVAVFRCGMILADTSYAGQLNMSDWVTRMVL  300 (478)
T ss_dssp             CTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHH-CCCEEEEEECEEECCSSSSSCCCTTBHHHHHHH
T ss_pred             CCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHh-CCCeEEEECceeeCCCccCCcCCHHHHHHHHHH
Confidence             45566665421100   0000112447777877666666554433 89999999999999843  1  223344333  


Q ss_pred             -HHHhCC-C--C----CC---CCCccccccHHHHHHHHHHHhcC----CC-CCceEEeeCCCC--cCHHHHHHHHHHHhC
Q 017977          247 -MMFAGG-P--L----GS---GQQWFSWIHLDDIVNLIYEALSN----PS-YRGVINGTAPNP--VRLAEMCDHLGNVLG  308 (363)
Q Consensus       247 -~~~~~~-~--~----~~---~~~~~~~i~v~D~a~a~~~~~~~----~~-~~g~~~i~~~~~--~s~~el~~~i~~~~g  308 (363)
                       ....+. +  +    ++   ++..++++|++|+|++++.++.+    +. .+++||++++++  +++.|+++.+.+. |
T Consensus       301 ~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~~~~~s~~el~~~l~~~-g  379 (478)
T 4dqv_A          301 SLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHDDGIGLDEYVDWLIEA-G  379 (478)
T ss_dssp             HHHHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCCCSSCSHHHHHHHHHHT-T
T ss_pred             HHHHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCCCCCCcCHHHHHHHHHHc-C
Confidence             111222 1  1    11   26778999999999999999875    33 456999999988  9999999999996 7


Q ss_pred             CCC-CC-CCcHHHHHH
Q 017977          309 RPS-WL-PVPEFALKA  322 (363)
Q Consensus       309 ~~~-~~-~~~~~~~~~  322 (363)
                      .+. .+ +.|+|..+.
T Consensus       380 ~~~~~i~~~~~w~~~l  395 (478)
T 4dqv_A          380 YPIRRIDDFAEWLQRF  395 (478)
T ss_dssp             CSCEEESSHHHHHHHH
T ss_pred             CCcccCCCHHHHHHHH
Confidence            653 33 677887654

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.97  E-value=2.1e-30  Score=228.79  Aligned_cols=263  Identities=14%  Similarity=0.138  Sum_probs=181.2

Q ss_pred             EEEEecCcchHHHHHHHHHHhC--CCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCCCCC
Q 017977           52 TVSVTGATGFIGRRLVQRLQAD--NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIG  129 (363)
Q Consensus        52 ~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~~~~  129 (363)
                      +|||||||||||++++++|+++  |++|++++|++.+...+...  ......+|+.|.+++.++++++|+|||+|+..  
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~--   76 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQ--GITVRQADYGDEAALTSALQGVEKLLLISSSE--   76 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHT--TCEEEECCTTCHHHHHHHTTTCSEEEECC-----
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcC--CCeEEEcCCCCHHHHHHHHhCCCEEEEeCCCC--
Confidence            4899999999999999999998  99999999987654332111  11244579999999999999999999999852  


Q ss_pred             CCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhcccchhhHHHHHH
Q 017977          130 TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRGVLVCRE  209 (363)
Q Consensus       130 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~~y~~~k~~~~~  209 (363)
                          .       +.|+.++.+++++|.+  .+++++|++||. ++|.       .+  ..|          ..+|...+.
T Consensus        77 ----~-------~~~~~~~~~l~~a~~~--~~~~~~v~~Ss~-~~~~-------~~--~~y----------~~sK~~~e~  123 (286)
T 2zcu_A           77 ----V-------GQRAPQHRNVINAAKA--AGVKFIAYTSLL-HADT-------SP--LGL----------ADEHIETEK  123 (286)
T ss_dssp             ----------------CHHHHHHHHHHH--HTCCEEEEEEET-TTTT-------CC--STT----------HHHHHHHHH
T ss_pred             ----c-------hHHHHHHHHHHHHHHH--cCCCEEEEECCC-CCCC-------Cc--chh----------HHHHHHHHH
Confidence                0       1478899999999999  788999999998 5441       11  133          333433333


Q ss_pred             HHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCC-CCCCCCCccccccHHHHHHHHHHHhcCCC-CCceEE
Q 017977          210 WEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGG-PLGSGQQWFSWIHLDDIVNLIYEALSNPS-YRGVIN  287 (363)
Q Consensus       210 ~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~v~D~a~a~~~~~~~~~-~~g~~~  287 (363)
                      ...   .  .+++++++||+.++++..    .++..... .+. .++.++..+++++++|+|++++.++.++. .+++||
T Consensus       124 ~~~---~--~~~~~~ilrp~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~  193 (286)
T 2zcu_A          124 MLA---D--SGIVYTLLRNGWYSENYL----ASAPAALE-HGVFIGAAGDGKIASATRADYAAAAARVISEAGHEGKVYE  193 (286)
T ss_dssp             HHH---H--HCSEEEEEEECCBHHHHH----TTHHHHHH-HTEEEESCTTCCBCCBCHHHHHHHHHHHHHSSSCTTCEEE
T ss_pred             HHH---H--cCCCeEEEeChHHhhhhH----HHhHHhhc-CCceeccCCCCccccccHHHHHHHHHHHhcCCCCCCceEE
Confidence            222   1  389999999987665421    11221111 111 13556778899999999999999998765 455999


Q ss_pred             eeCCCCcCHHHHHHHHHHHhCCCC-CCCCcHHHHHHHhc---cCce----------ee-ecCcccChhhHHH-cCCCccc
Q 017977          288 GTAPNPVRLAEMCDHLGNVLGRPS-WLPVPEFALKAVLG---EGAF----------VV-LEGQRVVPARAKE-LGFPFKY  351 (363)
Q Consensus       288 i~~~~~~s~~el~~~i~~~~g~~~-~~~~~~~~~~~~~~---~~~~----------~~-~~~~~~~~~k~~~-lG~~p~~  351 (363)
                      +++++.+|+.|+++.+.+.+|++. ..++|.+.......   ....          .. ......+++|+++ |||+|. 
T Consensus       194 i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~-  272 (286)
T 2zcu_A          194 LAGDSAWTLTQLAAELTKQSGKQVTYQNLSEADFAAALKSVGLPDGLADMLADSDVGASKGGLFDDSKTLSKLIGHPTT-  272 (286)
T ss_dssp             ECCSSCBCHHHHHHHHHHHHSSCCEEEECCHHHHHHHHTTSSCCHHHHHHHHHHHHHHHTTTTCCCCCHHHHHHTSCCC-
T ss_pred             EeCCCcCCHHHHHHHHHHHHCCCCceeeCCHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCCccCchHHHHHhCcCCC-
Confidence            999989999999999999999873 23556554433211   0000          00 0123456788865 898554 


Q ss_pred             ccHHHHHHHHhC
Q 017977          352 RYVKDALKAIMS  363 (363)
Q Consensus       352 ~~~~~~l~~~~~  363 (363)
                       +++|+|+++++
T Consensus       273 -~~~e~l~~~~~  283 (286)
T 2zcu_A          273 -TLAESVSHLFN  283 (286)
T ss_dssp             -CHHHHHHGGGC
T ss_pred             -CHHHHHHHHHh
Confidence             59999998864

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.97  E-value=3.1e-30  Score=225.42  Aligned_cols=202  Identities=17%  Similarity=0.220  Sum_probs=152.9

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCCCCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIG  129 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~~~~  129 (363)
                      ||+||||||+||||++|+++|+++|++|++++|++.....  .   ......+|+.|.+++.++++++|+|||+|+..  
T Consensus         2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~---~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~--   74 (267)
T 3ay3_A            2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAAE--A---HEEIVACDLADAQAVHDLVKDCDGIIHLGGVS--   74 (267)
T ss_dssp             EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCCC--T---TEEECCCCTTCHHHHHHHHTTCSEEEECCSCC--
T ss_pred             CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCccccC--C---CccEEEccCCCHHHHHHHHcCCCEEEECCcCC--
Confidence            4689999999999999999999999999999998754211  1   11255689999999999999999999999974  


Q ss_pred             CCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC----CcccccccCCCcchhhhhhhcccchhhHH
Q 017977          130 TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM----RAAHQEMITWLSDYCAKVYCLVSFNRGVL  205 (363)
Q Consensus       130 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg----~~~~~e~~~~~~~~~~~~~~~~~y~~~k~  205 (363)
                         ........+++|+.++.++++++.+  .+++++||+||. .+|+    ..+++|+.+..+.        ..|..+|+
T Consensus        75 ---~~~~~~~~~~~n~~~~~~l~~a~~~--~~~~~iv~~SS~-~~~~~~~~~~~~~E~~~~~~~--------~~Y~~sK~  140 (267)
T 3ay3_A           75 ---VERPWNDILQANIIGAYNLYEAARN--LGKPRIVFASSN-HTIGYYPRTTRIDTEVPRRPD--------SLYGLSKC  140 (267)
T ss_dssp             ---SCCCHHHHHHHTHHHHHHHHHHHHH--TTCCEEEEEEEG-GGSTTSBTTSCBCTTSCCCCC--------SHHHHHHH
T ss_pred             ---CCCCHHHHHHHHHHHHHHHHHHHHH--hCCCEEEEeCCH-HHhCCCCCCCCCCCCCCCCCC--------ChHHHHHH
Confidence               2233568899999999999999999  788899999999 7887    3457777664321        12445554


Q ss_pred             HHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHHHHHhcCCCC-Cc
Q 017977          206 VCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSY-RG  284 (363)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~-~g  284 (363)
                      ..+....... ...+++++++||+.+|+...                   .+...+++++++|+|++++.+++++.. .+
T Consensus       141 ~~e~~~~~~~-~~~gi~~~~lrp~~v~~~~~-------------------~~~~~~~~~~~~dva~~~~~~~~~~~~~~~  200 (267)
T 3ay3_A          141 FGEDLASLYY-HKFDIETLNIRIGSCFPKPK-------------------DARMMATWLSVDDFMRLMKRAFVAPKLGCT  200 (267)
T ss_dssp             HHHHHHHHHH-HTTCCCEEEEEECBCSSSCC-------------------SHHHHHHBCCHHHHHHHHHHHHHSSCCCEE
T ss_pred             HHHHHHHHHH-HHcCCCEEEEeceeecCCCC-------------------CCCeeeccccHHHHHHHHHHHHhCCCCCce
Confidence            4444433332 33589999999999984311                   112245799999999999999987764 35


Q ss_pred             eEEeeCCC
Q 017977          285 VINGTAPN  292 (363)
Q Consensus       285 ~~~i~~~~  292 (363)
                      +|++.++.
T Consensus       201 ~~~~~~~~  208 (267)
T 3ay3_A          201 VVYGASAN  208 (267)
T ss_dssp             EEEECCSC
T ss_pred             eEecCCCc
Confidence            78877654

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.97  E-value=5.2e-31  Score=241.19  Aligned_cols=210  Identities=19%  Similarity=0.225  Sum_probs=166.6

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCC-EEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCCCCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIG  129 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~~~~  129 (363)
                      |+|||||||||||++|+++|+++|+ +|++++|+                     .|.+++.++++++|+|||+|+....
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~---------------------~d~~~l~~~~~~~d~Vih~a~~~~~   59 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ---------------------TKEEELESALLKADFIVHLAGVNRP   59 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT---------------------CCHHHHHHHHHHCSEEEECCCSBCT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC---------------------CCHHHHHHHhccCCEEEECCcCCCC
Confidence            6899999999999999999999999 99988775                     4677888888899999999997422


Q ss_pred             CCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCC-CeEEEeccceecCCcccccccCCCcchhhhhhhcccchhhHHHHH
Q 017977          130 TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVR-PSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRGVLVCR  208 (363)
Q Consensus       130 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~~y~~~k~~~~  208 (363)
                           ..+...+++|+.++.++++++++  .+++ ++||+||. ++|+          .+.          |+.+|+..+
T Consensus        60 -----~~~~~~~~~n~~~~~~l~~a~~~--~~~~~~~v~~Ss~-~~~~----------~~~----------Y~~sK~~~E  111 (369)
T 3st7_A           60 -----EHDKEFSLGNVSYLDHVLDILTR--NTKKPAILLSSSI-QATQ----------DNP----------YGESKLQGE  111 (369)
T ss_dssp             -----TCSTTCSSSCCBHHHHHHHHHTT--CSSCCEEEEEEEG-GGGS----------CSH----------HHHHHHHHH
T ss_pred             -----CCHHHHHHHHHHHHHHHHHHHHH--hCCCCeEEEeCch-hhcC----------CCC----------chHHHHHHH
Confidence                 23445678899999999999999  7777 89999998 6554          223          444454444


Q ss_pred             HHHHHHhccCCCceEEEEeeceEEeCCCC-cccchHHHH--HHHhCCCC--CCCCCccccccHHHHHHHHHHHhcCCCC-
Q 017977          209 EWEGTALKVNKDVRLALIRIGIVLGKDGG-ALAKMIPLF--MMFAGGPL--GSGQQWFSWIHLDDIVNLIYEALSNPSY-  282 (363)
Q Consensus       209 ~~~~~~~~~~~~~~~~ilRp~~v~g~~~~-~~~~~~~~~--~~~~~~~~--~~~~~~~~~i~v~D~a~a~~~~~~~~~~-  282 (363)
                      ......... .+++++++||+++||+... ....+++.+  ....+.++  .++++.++++|++|+|++++.+++++.. 
T Consensus       112 ~~~~~~~~~-~g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~  190 (369)
T 3st7_A          112 QLLREYAEE-YGNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKRAIEGTPTI  190 (369)
T ss_dssp             HHHHHHHHH-HCCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCCSCTTCEEEEEEHHHHHHHHHHHHHTCCCE
T ss_pred             HHHHHHHHH-hCCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEecCCCeEEEEEEHHHHHHHHHHHHhCCccc
Confidence            444443333 3899999999999999653 233445444  33445544  6778889999999999999999998876 


Q ss_pred             -CceEEeeCCCCcCHHHHHHHHHHHhCCC
Q 017977          283 -RGVINGTAPNPVRLAEMCDHLGNVLGRP  310 (363)
Q Consensus       283 -~g~~~i~~~~~~s~~el~~~i~~~~g~~  310 (363)
                       +++||+++++.+++.|+++.+.+.+|.+
T Consensus       191 ~~~~~~i~~~~~~s~~e~~~~~~~~~g~~  219 (369)
T 3st7_A          191 ENGVPTVPNVFKVTLGEIVDLLYKFKQSR  219 (369)
T ss_dssp             ETTEECCSCCEEEEHHHHHHHHHHHHHHH
T ss_pred             CCceEEeCCCCceeHHHHHHHHHHHhCCC
Confidence             6799999999999999999999999875

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.96  E-value=7.9e-30  Score=230.68  Aligned_cols=234  Identities=16%  Similarity=0.215  Sum_probs=173.0

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhC-CC-EEEEEeCCCCcccccCCC--CCccccCcccccCcchHHhhccCCCEEEEc
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQAD-NH-QVRVLTRSRSKAELIFPG--KKTRFFPGVMIAEEPQWRDCIQGSTAVVNL  123 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~-g~-~V~~~~r~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~  123 (363)
                      ..+|+||||||||+||++|+++|+++ |+ +|++++|++.+...+...  .....+..+|+.|.+++.++++++|+|||+
T Consensus        19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~D~Vih~   98 (344)
T 2gn4_A           19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDICIHA   98 (344)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTTTCSEEEEC
T ss_pred             hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhcCCEEEEC
Confidence            34579999999999999999999999 97 999999987543221100  011224557999999999999999999999


Q ss_pred             cCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhcccchhh
Q 017977          124 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRG  203 (363)
Q Consensus       124 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~~y~~~  203 (363)
                      |+... ......++...+++|+.++.++++++.+  .+++++|++||. ..+         .+.+.|          +.+
T Consensus        99 Aa~~~-~~~~~~~~~~~~~~Nv~gt~~l~~aa~~--~~v~~~V~~SS~-~~~---------~p~~~Y----------~~s  155 (344)
T 2gn4_A           99 AALKH-VPIAEYNPLECIKTNIMGASNVINACLK--NAISQVIALSTD-KAA---------NPINLY----------GAT  155 (344)
T ss_dssp             CCCCC-HHHHHHSHHHHHHHHHHHHHHHHHHHHH--TTCSEEEEECCG-GGS---------SCCSHH----------HHH
T ss_pred             CCCCC-CCchhcCHHHHHHHHHHHHHHHHHHHHh--CCCCEEEEecCC-ccC---------CCccHH----------HHH
Confidence            99742 2223345678999999999999999999  789999999997 322         122334          444


Q ss_pred             HHHHHHHHHHHhcc--CCCceEEEEeeceEEeCCCCcccchHHHH--HHHhCC-C--CCCCCCccccccHHHHHHHHHHH
Q 017977          204 VLVCREWEGTALKV--NKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGG-P--LGSGQQWFSWIHLDDIVNLIYEA  276 (363)
Q Consensus       204 k~~~~~~~~~~~~~--~~~~~~~ilRp~~v~g~~~~~~~~~~~~~--~~~~~~-~--~~~~~~~~~~i~v~D~a~a~~~~  276 (363)
                      |...+.........  ..+++++++||+++||+.+.    +++.+  ....+. +  +.++...+++++++|+|++++.+
T Consensus       156 K~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~~----~i~~~~~~~~~g~~~~~i~~~~~~r~~i~v~D~a~~v~~~  231 (344)
T 2gn4_A          156 KLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRGS----VVPFFKKLVQNKASEIPITDIRMTRFWITLDEGVSFVLKS  231 (344)
T ss_dssp             HHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTTS----HHHHHHHHHHHTCCCEEESCTTCEEEEECHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCCC----HHHHHHHHHHcCCCceEEeCCCeEEeeEEHHHHHHHHHHH
Confidence            54444444433322  24899999999999998754    33333  233454 3  35677788999999999999999


Q ss_pred             hcCCCCCceEEeeCCCCcCHHHHHHHHHHHhCC
Q 017977          277 LSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGR  309 (363)
Q Consensus       277 ~~~~~~~g~~~i~~~~~~s~~el~~~i~~~~g~  309 (363)
                      +++...+.+|++.++ .+++.|+++.+.+.++.
T Consensus       232 l~~~~~g~~~~~~~~-~~s~~el~~~i~~~~~~  263 (344)
T 2gn4_A          232 LKRMHGGEIFVPKIP-SMKMTDLAKALAPNTPT  263 (344)
T ss_dssp             HHHCCSSCEEEECCC-EEEHHHHHHHHCTTCCE
T ss_pred             HhhccCCCEEecCCC-cEEHHHHHHHHHHhCCe
Confidence            987654558988775 69999999999976643

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.96  E-value=1.4e-29  Score=214.60  Aligned_cols=208  Identities=13%  Similarity=0.144  Sum_probs=158.7

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccC-cchHHhhccCCCEEEEccCCCCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAE-EPQWRDCIQGSTAVVNLAGTPIG  129 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~d~Vi~~a~~~~~  129 (363)
                      |+|+||||+|+||++++++|+++|++|++++|++.+....    .......+|+.| .+++.++++++|+|||+|+....
T Consensus         1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~----~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~~~~   76 (219)
T 3dqp_A            1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY----NNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGSGGK   76 (219)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC----TTEEEEECCTTSCHHHHHTTTTTCSEEEECCCCTTS
T ss_pred             CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc----CCceEEEecccCCHHHHHHHHcCCCEEEECCcCCCC
Confidence            5899999999999999999999999999999998765443    112255689999 99999999999999999997421


Q ss_pred             CCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhcccchhhHHHHHH
Q 017977          130 TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRGVLVCRE  209 (363)
Q Consensus       130 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~~y~~~k~~~~~  209 (363)
                               ..+++|+.++.++++++++  .+++++|++||. +.++..+..| .++        .....|..+|...++
T Consensus        77 ---------~~~~~n~~~~~~l~~a~~~--~~~~~iv~~SS~-~~~~~~~~~e-~~~--------~~~~~Y~~sK~~~e~  135 (219)
T 3dqp_A           77 ---------SLLKVDLYGAVKLMQAAEK--AEVKRFILLSTI-FSLQPEKWIG-AGF--------DALKDYYIAKHFADL  135 (219)
T ss_dssp             ---------SCCCCCCHHHHHHHHHHHH--TTCCEEEEECCT-TTTCGGGCCS-HHH--------HHTHHHHHHHHHHHH
T ss_pred             ---------CcEeEeHHHHHHHHHHHHH--hCCCEEEEECcc-cccCCCcccc-ccc--------ccccHHHHHHHHHHH
Confidence                     2567899999999999999  788999999998 5555444444 111        112235555544443


Q ss_pred             HHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHHHHHhcCCCC-CceEEe
Q 017977          210 WEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSY-RGVING  288 (363)
Q Consensus       210 ~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~-~g~~~i  288 (363)
                      ...    ...+++++++||+.+||+.....-.              .++..+++++++|+|++++.++.++.. +++||+
T Consensus       136 ~~~----~~~~i~~~ilrp~~v~g~~~~~~~~--------------~~~~~~~~i~~~Dva~~i~~~l~~~~~~g~~~~i  197 (219)
T 3dqp_A          136 YLT----KETNLDYTIIQPGALTEEEATGLID--------------INDEVSASNTIGDVADTIKELVMTDHSIGKVISM  197 (219)
T ss_dssp             HHH----HSCCCEEEEEEECSEECSCCCSEEE--------------ESSSCCCCEEHHHHHHHHHHHHTCGGGTTEEEEE
T ss_pred             HHH----hccCCcEEEEeCceEecCCCCCccc--------------cCCCcCCcccHHHHHHHHHHHHhCccccCcEEEe
Confidence            332    3459999999999999985422111              125667899999999999999988764 459999


Q ss_pred             eCCCCcCHHHHHHH
Q 017977          289 TAPNPVRLAEMCDH  302 (363)
Q Consensus       289 ~~~~~~s~~el~~~  302 (363)
                      ++++ .+++|+.+.
T Consensus       198 ~~g~-~~~~e~~~~  210 (219)
T 3dqp_A          198 HNGK-TAIKEALES  210 (219)
T ss_dssp             EECS-EEHHHHHHT
T ss_pred             CCCC-ccHHHHHHH
Confidence            8875 888887753

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.96  E-value=7.6e-29  Score=212.60  Aligned_cols=216  Identities=13%  Similarity=0.113  Sum_probs=157.7

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCCC
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  127 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~~  127 (363)
                      .++|+|+||||||+||++|+++|+++|++|++++|++++...+... .......+|+.  +++.+++.++|+|||+|+..
T Consensus        19 l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~-~~~~~~~~Dl~--~~~~~~~~~~D~vi~~ag~~   95 (236)
T 3e8x_A           19 FQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRER-GASDIVVANLE--EDFSHAFASIDAVVFAAGSG   95 (236)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHT-TCSEEEECCTT--SCCGGGGTTCSEEEECCCCC
T ss_pred             cCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhC-CCceEEEcccH--HHHHHHHcCCCEEEECCCCC
Confidence            3457999999999999999999999999999999998765443221 10014456887  77888999999999999974


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhcccchhhHHHH
Q 017977          128 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRGVLVC  207 (363)
Q Consensus       128 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~~y~~~k~~~  207 (363)
                      .     ....+..+++|+.++.++++++.+  .+++++|++||.+ .+.    .+..+   .      ....|..+|...
T Consensus        96 ~-----~~~~~~~~~~n~~~~~~l~~a~~~--~~~~~iv~~SS~~-~~~----~~~~~---~------~~~~Y~~sK~~~  154 (236)
T 3e8x_A           96 P-----HTGADKTILIDLWGAIKTIQEAEK--RGIKRFIMVSSVG-TVD----PDQGP---M------NMRHYLVAKRLA  154 (236)
T ss_dssp             T-----TSCHHHHHHTTTHHHHHHHHHHHH--HTCCEEEEECCTT-CSC----GGGSC---G------GGHHHHHHHHHH
T ss_pred             C-----CCCccccchhhHHHHHHHHHHHHH--cCCCEEEEEecCC-CCC----CCCCh---h------hhhhHHHHHHHH
Confidence            2     234678999999999999999998  7889999999973 222    11111   0      112244455433


Q ss_pred             HHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHHHHHhcCCC-CCceE
Q 017977          208 REWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS-YRGVI  286 (363)
Q Consensus       208 ~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~-~~g~~  286 (363)
                      +....     ..+++++++||+.++|+........           ...+...+++++++|+|++++.+++++. .+++|
T Consensus       155 e~~~~-----~~gi~~~~lrpg~v~~~~~~~~~~~-----------~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~  218 (236)
T 3e8x_A          155 DDELK-----RSSLDYTIVRPGPLSNEESTGKVTV-----------SPHFSEITRSITRHDVAKVIAELVDQQHTIGKTF  218 (236)
T ss_dssp             HHHHH-----HSSSEEEEEEECSEECSCCCSEEEE-----------ESSCSCCCCCEEHHHHHHHHHHHTTCGGGTTEEE
T ss_pred             HHHHH-----HCCCCEEEEeCCcccCCCCCCeEEe-----------ccCCCcccCcEeHHHHHHHHHHHhcCccccCCeE
Confidence            33322     3499999999999999864321111           0123345789999999999999998875 44599


Q ss_pred             EeeCCCCcCHHHHHHHHH
Q 017977          287 NGTAPNPVRLAEMCDHLG  304 (363)
Q Consensus       287 ~i~~~~~~s~~el~~~i~  304 (363)
                      +++++ ..+++|+++.+.
T Consensus       219 ~v~~~-~~~~~e~~~~i~  235 (236)
T 3e8x_A          219 EVLNG-DTPIAKVVEQLG  235 (236)
T ss_dssp             EEEEC-SEEHHHHHHTC-
T ss_pred             EEeCC-CcCHHHHHHHhc
Confidence            99987 599999998765

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.96  E-value=1.8e-28  Score=214.11  Aligned_cols=220  Identities=17%  Similarity=0.169  Sum_probs=167.8

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCCCCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIG  129 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~~~~  129 (363)
                      ||+||||||+|+||++|++.|+++|++|++++|++.+...     .......+|+.|.+++.++++++|+|||+||..  
T Consensus         3 ~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~-----~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~Ag~~--   75 (267)
T 3rft_A            3 MKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPAG-----PNEECVQCDLADANAVNAMVAGCDGIVHLGGIS--   75 (267)
T ss_dssp             EEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCCC-----TTEEEEECCTTCHHHHHHHHTTCSEEEECCSCC--
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCccccC-----CCCEEEEcCCCCHHHHHHHHcCCCEEEECCCCc--
Confidence            5789999999999999999999999999999998865441     112255689999999999999999999999973  


Q ss_pred             CCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC----CcccccccCCCcchhhhhhhcccchhhHH
Q 017977          130 TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM----RAAHQEMITWLSDYCAKVYCLVSFNRGVL  205 (363)
Q Consensus       130 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg----~~~~~e~~~~~~~~~~~~~~~~~y~~~k~  205 (363)
                         .....+.++++|+.++.++++++.+  .+.+++|++||. ++|+    ..+++|+.+..+.        ..|+.+|.
T Consensus        76 ---~~~~~~~~~~~N~~g~~~l~~a~~~--~~~~~iv~~SS~-~~~g~~~~~~~~~e~~~~~~~--------~~Y~~sK~  141 (267)
T 3rft_A           76 ---VEKPFEQILQGNIIGLYNLYEAARA--HGQPRIVFASSN-HTIGYYPQTERLGPDVPARPD--------GLYGVSKC  141 (267)
T ss_dssp             ---SCCCHHHHHHHHTHHHHHHHHHHHH--TTCCEEEEEEEG-GGGTTSBTTSCBCTTSCCCCC--------SHHHHHHH
T ss_pred             ---CcCCHHHHHHHHHHHHHHHHHHHHH--cCCCEEEEEcch-HHhCCCCCCCCCCCCCCCCCC--------ChHHHHHH
Confidence               2334678999999999999999999  788899999999 7776    4456666553221        22445554


Q ss_pred             HHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHHHHHhcCCCCC-c
Q 017977          206 VCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYR-G  284 (363)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~-g  284 (363)
                      ..+......... .+++++++||+.++|+..                   ++...+++++++|+++++..+++.+... .
T Consensus       142 ~~e~~~~~~a~~-~g~~~~~vr~~~v~~~~~-------------------~~~~~~~~~~~~d~a~~~~~~~~~~~~~~~  201 (267)
T 3rft_A          142 FGENLARMYFDK-FGQETALVRIGSCTPEPN-------------------NYRMLSTWFSHDDFVSLIEAVFRAPVLGCP  201 (267)
T ss_dssp             HHHHHHHHHHHH-HCCCEEEEEECBCSSSCC-------------------STTHHHHBCCHHHHHHHHHHHHHCSCCCSC
T ss_pred             HHHHHHHHHHHH-hCCeEEEEEeecccCCCC-------------------CCCceeeEEcHHHHHHHHHHHHhCCCCCce
Confidence            444443333322 489999999999998732                   2334457899999999999999887754 4


Q ss_pred             eEEeeCCCCcCHHHHHHHHHHHhCCCCC
Q 017977          285 VINGTAPNPVRLAEMCDHLGNVLGRPSW  312 (363)
Q Consensus       285 ~~~i~~~~~~s~~el~~~i~~~~g~~~~  312 (363)
                      ++++.++++.++.++...  +.+|..+.
T Consensus       202 ~~~~~s~~~~~~~~~~~~--~~~g~~p~  227 (267)
T 3rft_A          202 VVWGASANDAGWWDNSHL--GFLGWKPK  227 (267)
T ss_dssp             EEEECCCCTTCCBCCGGG--GGGCCCCC
T ss_pred             EEEEeCCCCCCcccChhH--HHCCCCCC
Confidence            888888887777766433  66776543

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.96  E-value=1.9e-28  Score=212.19  Aligned_cols=233  Identities=17%  Similarity=0.072  Sum_probs=165.3

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhC--CCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQAD--NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      ++|+|+||||+|+||++++++|+++  |++|++++|++.+...+...   .....+|+.|.+++.++++++|+|||+|+.
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~~~~---~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~   79 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGE---ADVFIGDITDADSINPAFQGIDALVILTSA   79 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTCC---TTEEECCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhcCCC---eeEEEecCCCHHHHHHHHcCCCEEEEeccc
Confidence            4579999999999999999999999  89999999987654433111   124568999999999999999999999996


Q ss_pred             CCCCCC---------C---hhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhhhh
Q 017977          127 PIGTRW---------S---SEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKV  194 (363)
Q Consensus       127 ~~~~~~---------~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~  194 (363)
                      ......         .   .+.....+++|+.++.++++++.+  .+++++|++||. +++.     +. .+...|..  
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~iv~~SS~-~~~~-----~~-~~~~~~~~--  148 (253)
T 1xq6_A           80 VPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKV--AGVKHIVVVGSM-GGTN-----PD-HPLNKLGN--  148 (253)
T ss_dssp             CCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHH--HTCSEEEEEEET-TTTC-----TT-CGGGGGGG--
T ss_pred             cccccccccccccccchhhccccccceeeeHHHHHHHHHHHHH--cCCCEEEEEcCc-cCCC-----CC-Cccccccc--
Confidence            422110         0   011224678999999999999998  788899999998 4332     11 11222322  


Q ss_pred             hhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHHH
Q 017977          195 YCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY  274 (363)
Q Consensus       195 ~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~  274 (363)
                         +.|..+|+..+....     ..+++++++||+.++|+.......+..     ....+.  ....++++++|+|++++
T Consensus       149 ---~~y~~sK~~~e~~~~-----~~~i~~~~vrpg~v~~~~~~~~~~~~~-----~~~~~~--~~~~~~~~~~Dva~~~~  213 (253)
T 1xq6_A          149 ---GNILVWKRKAEQYLA-----DSGTPYTIIRAGGLLDKEGGVRELLVG-----KDDELL--QTDTKTVPRADVAEVCI  213 (253)
T ss_dssp             ---CCHHHHHHHHHHHHH-----TSSSCEEEEEECEEECSCSSSSCEEEE-----STTGGG--GSSCCEEEHHHHHHHHH
T ss_pred             ---hhHHHHHHHHHHHHH-----hCCCceEEEecceeecCCcchhhhhcc-----CCcCCc--CCCCcEEcHHHHHHHHH
Confidence               335555543333222     258999999999999986432111100     001111  11246899999999999


Q ss_pred             HHhcCCCC-CceEEeeCCC---CcCHHHHHHHHHHHhCCC
Q 017977          275 EALSNPSY-RGVINGTAPN---PVRLAEMCDHLGNVLGRP  310 (363)
Q Consensus       275 ~~~~~~~~-~g~~~i~~~~---~~s~~el~~~i~~~~g~~  310 (363)
                      .+++++.. +++||+++++   ++++.|+++.+.+.+|++
T Consensus       214 ~~~~~~~~~g~~~~i~~~~~~~~~s~~e~~~~~~~~~g~~  253 (253)
T 1xq6_A          214 QALLFEEAKNKAFDLGSKPEGTSTPTKDFKALFSQVTSRF  253 (253)
T ss_dssp             HHTTCGGGTTEEEEEEECCTTTSCCCCCHHHHHHTCCCCC
T ss_pred             HHHcCccccCCEEEecCCCcCCCCCHHHHHHHHHHHhCCC
Confidence            99987654 4599999964   599999999999998863

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.96  E-value=1.6e-29  Score=224.55  Aligned_cols=272  Identities=14%  Similarity=0.040  Sum_probs=180.9

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCC-CEEEEEeCCCCccc--ccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAE--LIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~--~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      +|+|+||||||+||++++++|+++| ++|++++|++.+..  .+...  ......+|+.|.+++.++++++|+|||+++.
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~--~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~   82 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQ--GAEVVQGDQDDQVIMELALNGAYATFIVTNY   82 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHT--TCEEEECCTTCHHHHHHHHTTCSEEEECCCH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHC--CCEEEEecCCCHHHHHHHHhcCCEEEEeCCC
Confidence            4799999999999999999999998 99999999876531  11110  1114457999999999999999999999974


Q ss_pred             CCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhcccchhhHHH
Q 017977          127 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRGVLV  206 (363)
Q Consensus       127 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~~y~~~k~~  206 (363)
                      ..         ....+.|+.++.++++++.+  .+++++|++|+. ++|+.   .+. .+...|..          +|..
T Consensus        83 ~~---------~~~~~~~~~~~~~~~~aa~~--~gv~~iv~~S~~-~~~~~---~~~-~~~~~y~~----------sK~~  136 (299)
T 2wm3_A           83 WE---------SCSQEQEVKQGKLLADLARR--LGLHYVVYSGLE-NIKKL---TAG-RLAAAHFD----------GKGE  136 (299)
T ss_dssp             HH---------HTCHHHHHHHHHHHHHHHHH--HTCSEEEECCCC-CHHHH---TTT-SCCCHHHH----------HHHH
T ss_pred             Cc---------cccchHHHHHHHHHHHHHHH--cCCCEEEEEcCc-ccccc---CCC-cccCchhh----------HHHH
Confidence            10         01134678899999999999  789999997766 65541   111 11223333          3322


Q ss_pred             HHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCC----CCCCCCCccccccHHHHHHHHHHHhcCCC-
Q 017977          207 CREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGG----PLGSGQQWFSWIHLDDIVNLIYEALSNPS-  281 (363)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~v~D~a~a~~~~~~~~~-  281 (363)
                      .+....   .  .|++++++||+.+||+....   +.+.. ...+.    .++.++..+++++++|+|++++.++.++. 
T Consensus       137 ~e~~~~---~--~gi~~~ilrp~~~~~~~~~~---~~~~~-~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~  207 (299)
T 2wm3_A          137 VEEYFR---D--IGVPMTSVRLPCYFENLLSH---FLPQK-APDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPEK  207 (299)
T ss_dssp             HHHHHH---H--HTCCEEEEECCEEGGGGGTT---TCCEE-CTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHHHSHHH
T ss_pred             HHHHHH---H--CCCCEEEEeecHHhhhchhh---cCCcc-cCCCCEEEEEecCCCCccceecHHHHHHHHHHHHcChhh
Confidence            222222   1  38999999999999974221   11000 01121    12346778899999999999999998753 


Q ss_pred             -CCceEEeeCCCCcCHHHHHHHHHHHhCCC-CCCCCcHHHHHHH-------hccCceeeecCcccChhhHHHcCCCcccc
Q 017977          282 -YRGVINGTAPNPVRLAEMCDHLGNVLGRP-SWLPVPEFALKAV-------LGEGAFVVLEGQRVVPARAKELGFPFKYR  352 (363)
Q Consensus       282 -~~g~~~i~~~~~~s~~el~~~i~~~~g~~-~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~k~~~lG~~p~~~  352 (363)
                       .+++|++++ +.+|+.|+++.+.+.+|++ ...++|.+.....       +.++..........+....+.+|.+|+  
T Consensus       208 ~~g~~~~~~g-~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--  284 (299)
T 2wm3_A          208 YVGQNIGLST-CRHTAEEYAALLTKHTRKVVHDAKMTPEDYEKLGFPGARDLANMFRFYALRPDRDIELTLRLNPKAL--  284 (299)
T ss_dssp             HTTCEEECCS-EEECHHHHHHHHHHHHSSCEEECCCCTHHHHTTCSTTHHHHHHHHHHHTTCCCCCHHHHHHHCTTCC--
T ss_pred             hCCeEEEeee-ccCCHHHHHHHHHHHHCCCceeEecCHHHHHhcCCCcHHHHHHHHHHHHhcCCCCHHHHHHhCCCCC--
Confidence             345999987 6799999999999999987 3345554444321       000010111111122222245898887  


Q ss_pred             cHHHHHHHH
Q 017977          353 YVKDALKAI  361 (363)
Q Consensus       353 ~~~~~l~~~  361 (363)
                      +|++.+++.
T Consensus       285 ~~~~~~~~~  293 (299)
T 2wm3_A          285 TLDQWLEQH  293 (299)
T ss_dssp             CHHHHHHHH
T ss_pred             CHHHHHHhC
Confidence            699999875

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.96  E-value=4.4e-28  Score=205.60  Aligned_cols=216  Identities=12%  Similarity=0.109  Sum_probs=136.0

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCCCCCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGT  130 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~~~~~  130 (363)
                      |||||||||||||++|+++|+++|++|++++|++.+...+...   .....+|+.|.++  +.+.++|+|||+|+.... 
T Consensus         1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~---~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~~~-   74 (221)
T 3ew7_A            1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTHKD---INILQKDIFDLTL--SDLSDQNVVVDAYGISPD-   74 (221)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHCSS---SEEEECCGGGCCH--HHHTTCSEEEECCCSSTT-
T ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhccCC---CeEEeccccChhh--hhhcCCCEEEECCcCCcc-
Confidence            6899999999999999999999999999999998765544311   2255689998887  788999999999997321 


Q ss_pred             CCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC---CcccccccCCCcchhhhhhhcccchhhHHHH
Q 017977          131 RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM---RAAHQEMITWLSDYCAKVYCLVSFNRGVLVC  207 (363)
Q Consensus       131 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg---~~~~~e~~~~~~~~~~~~~~~~~y~~~k~~~  207 (363)
                               ..+.|+.++.++++++++  .+++++|++||.+.+|+   ..+..|+.+..+        ...|..+|...
T Consensus        75 ---------~~~~~~~~~~~l~~a~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~--------~~~y~~~k~~~  135 (221)
T 3ew7_A           75 ---------EAEKHVTSLDHLISVLNG--TVSPRLLVVGGAASLQIDEDGNTLLESKGLRE--------APYYPTARAQA  135 (221)
T ss_dssp             ---------TTTSHHHHHHHHHHHHCS--CCSSEEEEECCCC---------------------------CCCSCCHHHHH
T ss_pred             ---------ccchHHHHHHHHHHHHHh--cCCceEEEEecceEEEcCCCCccccccCCCCC--------HHHHHHHHHHH
Confidence                     134689999999999999  78889999999966666   113333333211        12244445333


Q ss_pred             HHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHHHHHhcCCCC-CceE
Q 017977          208 REWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSY-RGVI  286 (363)
Q Consensus       208 ~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~-~g~~  286 (363)
                      +.+ ........+++++++||+.+||+.... ..+    .. .+..+.......++++++|+|++++.+++++.. +.+|
T Consensus       136 e~~-~~~~~~~~gi~~~ivrp~~v~g~~~~~-~~~----~~-~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~  208 (221)
T 3ew7_A          136 KQL-EHLKSHQAEFSWTYISPSAMFEPGERT-GDY----QI-GKDHLLFGSDGNSFISMEDYAIAVLDEIERPNHLNEHF  208 (221)
T ss_dssp             HHH-HHHHTTTTTSCEEEEECSSCCCCC---------------------------CCCHHHHHHHHHHHHHSCSCTTSEE
T ss_pred             HHH-HHHHhhccCccEEEEeCcceecCCCcc-Cce----Ee-ccccceecCCCCceEeHHHHHHHHHHHHhCccccCCEE
Confidence            333 223321459999999999999983321 111    11 111111111123689999999999999998874 4599


Q ss_pred             EeeCCCCcCHHH
Q 017977          287 NGTAPNPVRLAE  298 (363)
Q Consensus       287 ~i~~~~~~s~~e  298 (363)
                      |++++.+.+.+|
T Consensus       209 ~~~~~~~~~~~~  220 (221)
T 3ew7_A          209 TVAGKLEHHHHH  220 (221)
T ss_dssp             ECCC--------
T ss_pred             EECCCCcccccc
Confidence            999988777654

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.95  E-value=9.7e-28  Score=203.99  Aligned_cols=216  Identities=19%  Similarity=0.142  Sum_probs=149.6

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCCCCCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGT  130 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~~~~~  130 (363)
                      |||||||||||||++|+++|+++|++|++++|++.+...+...  ......+|+.|.++  +.+.++|+|||+|+.... 
T Consensus         1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~--~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~~~-   75 (224)
T 3h2s_A            1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGA--TVATLVKEPLVLTE--ADLDSVDAVVDALSVPWG-   75 (224)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTCT--TSEEEECCGGGCCH--HHHTTCSEEEECCCCCTT-
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccCC--CceEEecccccccH--hhcccCCEEEECCccCCC-
Confidence            6899999999999999999999999999999998765543221  12245679998887  788999999999997411 


Q ss_pred             CCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC-C----cccccccCCCcchhhhhhhcccchhhHH
Q 017977          131 RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM-R----AAHQEMITWLSDYCAKVYCLVSFNRGVL  205 (363)
Q Consensus       131 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg-~----~~~~e~~~~~~~~~~~~~~~~~y~~~k~  205 (363)
                         .    ...+.|+.++.++++++++  .+ +++|++||.+.+|+ .    .+.++...+.+        ...|..+|.
T Consensus        76 ---~----~~~~~n~~~~~~l~~a~~~--~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~--------~~~y~~sK~  137 (224)
T 3h2s_A           76 ---S----GRGYLHLDFATHLVSLLRN--SD-TLAVFILGSASLAMPGADHPMILDFPESAAS--------QPWYDGALY  137 (224)
T ss_dssp             ---S----SCTHHHHHHHHHHHHTCTT--CC-CEEEEECCGGGSBCTTCSSCGGGGCCGGGGG--------STTHHHHHH
T ss_pred             ---c----chhhHHHHHHHHHHHHHHH--cC-CcEEEEecceeeccCCCCccccccCCCCCcc--------chhhHHHHH
Confidence               1    1235799999999999999  67 88999999865555 1    12333322210        123555554


Q ss_pred             HHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHHHHHhcCCCC-Cc
Q 017977          206 VCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSY-RG  284 (363)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~-~g  284 (363)
                      ..+.+ . .+....+++++++||+.+||++....  +.     .....+..+....++++++|+|++++.+++++.. +.
T Consensus       138 ~~e~~-~-~~~~~~~i~~~ivrp~~v~g~~~~~~--~~-----~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~~~g~  208 (224)
T 3h2s_A          138 QYYEY-Q-FLQMNANVNWIGISPSEAFPSGPATS--YV-----AGKDTLLVGEDGQSHITTGNMALAILDQLEHPTAIRD  208 (224)
T ss_dssp             HHHHH-H-HHTTCTTSCEEEEEECSBCCCCCCCC--EE-----EESSBCCCCTTSCCBCCHHHHHHHHHHHHHSCCCTTS
T ss_pred             HHHHH-H-HHHhcCCCcEEEEcCccccCCCcccC--ce-----ecccccccCCCCCceEeHHHHHHHHHHHhcCccccCC
Confidence            44422 2 22233499999999999999843221  11     1112233344557899999999999999998874 55


Q ss_pred             eEEeeCCCCcCHHH
Q 017977          285 VINGTAPNPVRLAE  298 (363)
Q Consensus       285 ~~~i~~~~~~s~~e  298 (363)
                      +|++++.++.++.+
T Consensus       209 ~~~~~~~~~~~~~~  222 (224)
T 3h2s_A          209 RIVVRDADLEHHHH  222 (224)
T ss_dssp             EEEEEECC------
T ss_pred             EEEEecCcchhccc
Confidence            99999987666543

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.95  E-value=1.7e-27  Score=215.98  Aligned_cols=232  Identities=14%  Similarity=0.106  Sum_probs=161.0

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCccc-ccC---C-CCCccccCcccccCcchHHhhcc--CCCEEEE
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE-LIF---P-GKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVN  122 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~---~-~~~~~~~~~~d~~~~~~~~~~~~--~~d~Vi~  122 (363)
                      +|+|||||||||||++|++.|++.|++|++++|++.... ...   . .........+|+.|.+++.++++  ++|+|||
T Consensus        10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi~   89 (346)
T 3i6i_A           10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIVVS   89 (346)
T ss_dssp             -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEEEE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEEEE
Confidence            468999999999999999999999999999999873211 000   0 00111245689999999999999  9999999


Q ss_pred             ccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCC-CCCeEEEeccceecCCcccccccCCCcchhhhhhhcccch
Q 017977          123 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEG-VRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVSFN  201 (363)
Q Consensus       123 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~~y~  201 (363)
                      +++.                .|+.++.+++++|.+  .+ +++||+ |+    || ...+|..+..+.        ..|.
T Consensus        90 ~a~~----------------~n~~~~~~l~~aa~~--~g~v~~~v~-S~----~g-~~~~e~~~~~p~--------~~y~  137 (346)
T 3i6i_A           90 TVGG----------------ESILDQIALVKAMKA--VGTIKRFLP-SE----FG-HDVNRADPVEPG--------LNMY  137 (346)
T ss_dssp             CCCG----------------GGGGGHHHHHHHHHH--HCCCSEEEC-SC----CS-SCTTTCCCCTTH--------HHHH
T ss_pred             CCch----------------hhHHHHHHHHHHHHH--cCCceEEee-cc----cC-CCCCccCcCCCc--------chHH
Confidence            9986                288899999999999  77 887775 43    33 122333332111        1133


Q ss_pred             hhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCC---CCCCCCccccccHHHHHHHHHHHhc
Q 017977          202 RGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGP---LGSGQQWFSWIHLDDIVNLIYEALS  278 (363)
Q Consensus       202 ~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~v~D~a~a~~~~~~  278 (363)
                      .+|+..+....     ..|++++++||+.++|.........  ......+..   +++++..+++++++|+|++++.++.
T Consensus       138 ~sK~~~e~~l~-----~~g~~~tivrpg~~~g~~~~~~~~~--~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~  210 (346)
T 3i6i_A          138 REKRRVRQLVE-----ESGIPFTYICCNSIASWPYYNNIHP--SEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVD  210 (346)
T ss_dssp             HHHHHHHHHHH-----HTTCCBEEEECCEESSCCCSCC-------CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHH-----HcCCCEEEEEecccccccCcccccc--ccccCCCceEEEccCCCceEEecCHHHHHHHHHHHHh
Confidence            34433333222     2489999999999999753321111  001112222   2678889999999999999999998


Q ss_pred             CCCC-CceEEeeC-CCCcCHHHHHHHHHHHhCCCCC-CCCcHHHH
Q 017977          279 NPSY-RGVINGTA-PNPVRLAEMCDHLGNVLGRPSW-LPVPEFAL  320 (363)
Q Consensus       279 ~~~~-~g~~~i~~-~~~~s~~el~~~i~~~~g~~~~-~~~~~~~~  320 (363)
                      ++.. +++|++.+ ++.+|+.|+++.+++.+|++.. ..+|...+
T Consensus       211 ~~~~~~~~~~i~g~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~  255 (346)
T 3i6i_A          211 DVRTLNKSVHFRPSCNCLNINELASVWEKKIGRTLPRVTVTEDDL  255 (346)
T ss_dssp             CGGGTTEEEECCCGGGEECHHHHHHHHHHHHTSCCCEEEECHHHH
T ss_pred             CccccCeEEEEeCCCCCCCHHHHHHHHHHHHCCCCceEecCHHHH
Confidence            8764 56899885 4789999999999999998733 23444433

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.94  E-value=2.4e-27  Score=200.18  Aligned_cols=205  Identities=15%  Similarity=0.088  Sum_probs=148.2

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCC--EEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      ++|+|+||||+|+||++++++|+++|+  +|++++|++.+.     . .......+|+.|.+++.+++  +|+|||+|+.
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~~-----~-~~~~~~~~D~~~~~~~~~~~--~d~vi~~a~~   75 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE-----H-PRLDNPVGPLAELLPQLDGS--IDTAFCCLGT   75 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC-----C-TTEECCBSCHHHHGGGCCSC--CSEEEECCCC
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCccc-----C-CCceEEeccccCHHHHHHhh--hcEEEECeee
Confidence            347999999999999999999999998  999999987651     1 11224567898888888877  9999999996


Q ss_pred             CCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhcccchhhHHH
Q 017977          127 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRGVLV  206 (363)
Q Consensus       127 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~~y~~~k~~  206 (363)
                      ...   .....+.++++|+.++.++++++.+  .+++++|++||. ++|+        ++...|..+          |..
T Consensus        76 ~~~---~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~~v~~Ss~-~~~~--------~~~~~y~~s----------K~~  131 (215)
T 2a35_A           76 TIK---EAGSEEAFRAVDFDLPLAVGKRALE--MGARHYLVVSAL-GADA--------KSSIFYNRV----------KGE  131 (215)
T ss_dssp             CHH---HHSSHHHHHHHHTHHHHHHHHHHHH--TTCCEEEEECCT-TCCT--------TCSSHHHHH----------HHH
T ss_pred             ccc---cCCCHHHHHHhhHHHHHHHHHHHHH--cCCCEEEEECCc-ccCC--------CCccHHHHH----------HHH
Confidence            321   1334678899999999999999999  788899999998 6554        122334433          322


Q ss_pred             HHHHHHHHhccCCCce-EEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHHHHHhcCCCCCce
Q 017977          207 CREWEGTALKVNKDVR-LALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGV  285 (363)
Q Consensus       207 ~~~~~~~~~~~~~~~~-~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~g~  285 (363)
                      .   +...  ...+++ ++++||+.+||+....  .+...+. ....++..  ..+++++++|+|++++.+++++. +++
T Consensus       132 ~---e~~~--~~~~~~~~~~vrp~~v~g~~~~~--~~~~~~~-~~~~~~~~--~~~~~i~~~Dva~~~~~~~~~~~-~~~  200 (215)
T 2a35_A          132 L---EQAL--QEQGWPQLTIARPSLLFGPREEF--RLAEILA-APIARILP--GKYHGIEACDLARALWRLALEEG-KGV  200 (215)
T ss_dssp             H---HHHH--TTSCCSEEEEEECCSEESTTSCE--EGGGGTT-CCCC------CHHHHHHHHHHHHHHHHHHTCCC-SEE
T ss_pred             H---HHHH--HHcCCCeEEEEeCceeeCCCCcc--hHHHHHH-HhhhhccC--CCcCcEeHHHHHHHHHHHHhcCC-CCc
Confidence            2   2222  224899 9999999999997542  1221111 01112222  26789999999999999998875 779


Q ss_pred             EEeeCCCCcCH
Q 017977          286 INGTAPNPVRL  296 (363)
Q Consensus       286 ~~i~~~~~~s~  296 (363)
                      ||+++++.+++
T Consensus       201 ~~i~~~~~~~~  211 (215)
T 2a35_A          201 RFVESDELRKL  211 (215)
T ss_dssp             EEEEHHHHHHH
T ss_pred             eEEcHHHHHHh
Confidence            99998765544

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.93  E-value=9.1e-25  Score=187.84  Aligned_cols=205  Identities=14%  Similarity=0.054  Sum_probs=146.0

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCC--EEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  127 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~~  127 (363)
                      +|+|+||||+|+||++++++|+++|+  +|++++|++.+.......  ......+|+.|.+++.++++++|+|||+||..
T Consensus        18 ~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~--~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~   95 (242)
T 2bka_A           18 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYK--NVNQEVVDFEKLDDYASAFQGHDVGFCCLGTT   95 (242)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGG--GCEEEECCGGGGGGGGGGGSSCSEEEECCCCC
T ss_pred             CCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccC--CceEEecCcCCHHHHHHHhcCCCEEEECCCcc
Confidence            47999999999999999999999999  999999988654332111  11244589999999999999999999999963


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhcccchhhHHHH
Q 017977          128 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRGVLVC  207 (363)
Q Consensus       128 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~~y~~~k~~~  207 (363)
                      .    .....+.++++|+.++.++++++.+  .+.+++|++||. ++|+        ++...|..+          |...
T Consensus        96 ~----~~~~~~~~~~~n~~~~~~~~~~~~~--~~~~~iv~~SS~-~~~~--------~~~~~Y~~s----------K~~~  150 (242)
T 2bka_A           96 R----GKAGAEGFVRVDRDYVLKSAELAKA--GGCKHFNLLSSK-GADK--------SSNFLYLQV----------KGEV  150 (242)
T ss_dssp             H----HHHHHHHHHHHHTHHHHHHHHHHHH--TTCCEEEEECCT-TCCT--------TCSSHHHHH----------HHHH
T ss_pred             c----ccCCcccceeeeHHHHHHHHHHHHH--CCCCEEEEEccC-cCCC--------CCcchHHHH----------HHHH
Confidence            1    1234567899999999999999999  788899999998 5554        122234433          3222


Q ss_pred             HHHHHHHhccCCCc-eEEEEeeceEEeCCCCcccchHHHH-HHH-hCCCCCCCCCccccccHHHHHHHHHHHhcCCCCCc
Q 017977          208 REWEGTALKVNKDV-RLALIRIGIVLGKDGGALAKMIPLF-MMF-AGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRG  284 (363)
Q Consensus       208 ~~~~~~~~~~~~~~-~~~ilRp~~v~g~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~g  284 (363)
                      +   ...  ...++ +++++||+.++|+....  .....+ ... ...+..  .....+++++|+|++++.++.++...+
T Consensus       151 e---~~~--~~~~~~~~~~vrpg~v~~~~~~~--~~~~~~~~~~~~~~~~~--~~~~~~~~~~dva~~~~~~~~~~~~~~  221 (242)
T 2bka_A          151 E---AKV--EELKFDRYSVFRPGVLLCDRQES--RPGEWLVRKFFGSLPDS--WASGHSVPVVTVVRAMLNNVVRPRDKQ  221 (242)
T ss_dssp             H---HHH--HTTCCSEEEEEECCEEECTTGGG--SHHHHHHHHHHCSCCTT--GGGGTEEEHHHHHHHHHHHHTSCCCSS
T ss_pred             H---HHH--HhcCCCCeEEEcCceecCCCCCC--cHHHHHHHHhhcccCcc--ccCCcccCHHHHHHHHHHHHhCccccC
Confidence            2   222  22377 69999999999996422  111111 111 122211  112358999999999999999877667


Q ss_pred             eEEeeC
Q 017977          285 VINGTA  290 (363)
Q Consensus       285 ~~~i~~  290 (363)
                      .+++.+
T Consensus       222 ~~~~~~  227 (242)
T 2bka_A          222 MELLEN  227 (242)
T ss_dssp             EEEEEH
T ss_pred             eeEeeH
Confidence            777655

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.92  E-value=7.4e-26  Score=202.26  Aligned_cols=225  Identities=16%  Similarity=0.218  Sum_probs=153.3

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcc-----cccCC-CCCccccCcccccCcchHHhhccCCCEEEEc
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-----ELIFP-GKKTRFFPGVMIAEEPQWRDCIQGSTAVVNL  123 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~  123 (363)
                      +|+|+||||||++|++++++|+++|++|++++|+.+..     ..+.. .........+|+.|.+++.++++++|+|||+
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~   83 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISA   83 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEEC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCCCEEEEC
Confidence            57899999999999999999999999999999986431     11000 0011124567999999999999999999999


Q ss_pred             cCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCC-CCCeEEEeccceecCC--cccccccCC-Ccchhhhhhhccc
Q 017977          124 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEG-VRPSVLELVKPKYLMR--AAHQEMITW-LSDYCAKVYCLVS  199 (363)
Q Consensus       124 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~v~~SS~~~~yg~--~~~~e~~~~-~~~~~~~~~~~~~  199 (363)
                      ++....            ..|+.++.+++++|.+  .+ +++||+ |+    ||.  ........+ .+.|         
T Consensus        84 a~~~~~------------~~~~~~~~~l~~aa~~--~g~v~~~v~-S~----~g~~~~~~~~~~~p~~~~y---------  135 (313)
T 1qyd_A           84 LAGGVL------------SHHILEQLKLVEAIKE--AGNIKRFLP-SE----FGMDPDIMEHALQPGSITF---------  135 (313)
T ss_dssp             CCCSSS------------STTTTTHHHHHHHHHH--SCCCSEEEC-SC----CSSCTTSCCCCCSSTTHHH---------
T ss_pred             Cccccc------------hhhHHHHHHHHHHHHh--cCCCceEEe-cC----CcCCccccccCCCCCcchH---------
Confidence            986321            1267888999999999  77 888875 33    331  000011011 1223         


Q ss_pred             chhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCC---CCCCCCccccccHHHHHHHHHHH
Q 017977          200 FNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGP---LGSGQQWFSWIHLDDIVNLIYEA  276 (363)
Q Consensus       200 y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~v~D~a~a~~~~  276 (363)
                        .+|...++   ...  ..+++++++||+.++|+.......... .....+..   +++++..+++++++|+|++++.+
T Consensus       136 --~sK~~~e~---~~~--~~g~~~~ilrp~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~  207 (313)
T 1qyd_A          136 --IDKRKVRR---AIE--AASIPYTYVSSNMFAGYFAGSLAQLDG-HMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKS  207 (313)
T ss_dssp             --HHHHHHHH---HHH--HTTCCBCEEECCEEHHHHTTTSSCTTC-CSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHH
T ss_pred             --HHHHHHHH---HHH--hcCCCeEEEEeceeccccccccccccc-cccCCCCeEEEeCCCCceEEEEEHHHHHHHHHHH
Confidence              23322222   222  248999999999998753211111000 00011111   25677889999999999999999


Q ss_pred             hcCCC-CCceEEeeCC-CCcCHHHHHHHHHHHhCCC
Q 017977          277 LSNPS-YRGVINGTAP-NPVRLAEMCDHLGNVLGRP  310 (363)
Q Consensus       277 ~~~~~-~~g~~~i~~~-~~~s~~el~~~i~~~~g~~  310 (363)
                      +.++. .++.|++.++ +.+|+.|+++.+.+.+|++
T Consensus       208 l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~  243 (313)
T 1qyd_A          208 IDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSEQN  243 (313)
T ss_dssp             TTCGGGSSSEEECCCGGGEEEHHHHHHHHHHHHTCC
T ss_pred             HhCcccCCceEEEeCCCCccCHHHHHHHHHHhcCCC
Confidence            98765 3457888764 7899999999999999987

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.92  E-value=3.1e-24  Score=179.76  Aligned_cols=201  Identities=15%  Similarity=0.129  Sum_probs=140.8

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCCCCCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGT  130 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~~~~~  130 (363)
                      |+|+||||||+||++++++|+++|++|++++|++.+......  .......+|+.|.+++.++++++|+|||+|+.....
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~~   81 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGP--RPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRNDL   81 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSC--CCSEEEESCTTSHHHHHHHHTTCSEEEECCCCTTCC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccccC--CceEEEEecCCCHHHHHHHHcCCCEEEECccCCCCC
Confidence            699999999999999999999999999999998766443211  112245679999999999999999999999964321


Q ss_pred             CCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhcccchhhHHHHHHH
Q 017977          131 RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRGVLVCREW  210 (363)
Q Consensus       131 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~~y~~~k~~~~~~  210 (363)
                        .      ..++|+.++.++++++.+  .+++++|++||. ++|+..+    ..+  .      ....|..+|...+..
T Consensus        82 --~------~~~~n~~~~~~~~~~~~~--~~~~~~v~~Ss~-~~~~~~~----~~~--~------~~~~y~~~K~~~e~~  138 (206)
T 1hdo_A           82 --S------PTTVMSEGARNIVAAMKA--HGVDKVVACTSA-FLLWDPT----KVP--P------RLQAVTDDHIRMHKV  138 (206)
T ss_dssp             --S------CCCHHHHHHHHHHHHHHH--HTCCEEEEECCG-GGTSCTT----CSC--G------GGHHHHHHHHHHHHH
T ss_pred             --C------ccchHHHHHHHHHHHHHH--hCCCeEEEEeee-eeccCcc----ccc--c------cchhHHHHHHHHHHH
Confidence              1      124789999999999998  788899999999 7776211    000  0      112244444333332


Q ss_pred             HHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHHHHHhcCCCC-CceEEee
Q 017977          211 EGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSY-RGVINGT  289 (363)
Q Consensus       211 ~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~-~g~~~i~  289 (363)
                      .     ...+++++++||+.+ ++.... ..+..   ...+    .+.  .++++++|+|++++.+++++.. +++|+++
T Consensus       139 ~-----~~~~i~~~~lrp~~~-~~~~~~-~~~~~---~~~~----~~~--~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~  202 (206)
T 1hdo_A          139 L-----RESGLKYVAVMPPHI-GDQPLT-GAYTV---TLDG----RGP--SRVISKHDLGHFMLRCLTTDEYDGHSTYPS  202 (206)
T ss_dssp             H-----HHTCSEEEEECCSEE-ECCCCC-SCCEE---ESSS----CSS--CSEEEHHHHHHHHHHTTSCSTTTTCEEEEE
T ss_pred             H-----HhCCCCEEEEeCCcc-cCCCCC-cceEe---cccC----CCC--CCccCHHHHHHHHHHHhcCccccccceeee
Confidence            2     124899999999998 333211 11100   0011    111  4799999999999999988764 4499999


Q ss_pred             CCC
Q 017977          290 APN  292 (363)
Q Consensus       290 ~~~  292 (363)
                      ++.
T Consensus       203 ~g~  205 (206)
T 1hdo_A          203 HQY  205 (206)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            874

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.92  E-value=4.4e-25  Score=199.98  Aligned_cols=221  Identities=14%  Similarity=0.128  Sum_probs=156.0

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcc--cccCCCCCccccCccc-ccCcchHHhhccCCCEEEEccCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA--ELIFPGKKTRFFPGVM-IAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~d-~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      +|+|+|||||||||++|++.|+++|++|++++|++++.  ..+.... ......+| +.|.+++.++++++|+|||+++.
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~~~-~v~~v~~D~l~d~~~l~~~~~~~d~Vi~~a~~   83 (352)
T 1xgk_A            5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIP-NVTLFQGPLLNNVPLMDTLFEGAHLAFINTTS   83 (352)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTST-TEEEEESCCTTCHHHHHHHHTTCSEEEECCCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhhcC-CcEEEECCccCCHHHHHHHHhcCCEEEEcCCC
Confidence            46899999999999999999999999999999987654  2221111 11234579 99999999999999999999875


Q ss_pred             CCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCC-CCCeEEEeccc-eecCCcccccccCCCcchhhhhhhcccchhhH
Q 017977          127 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEG-VRPSVLELVKP-KYLMRAAHQEMITWLSDYCAKVYCLVSFNRGV  204 (363)
Q Consensus       127 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~v~~SS~~-~~yg~~~~~e~~~~~~~~~~~~~~~~~y~~~k  204 (363)
                      ..     .       +.|..+ +++++++.+  .+ +++|||+||.+ ..|+.       ++...|..+          |
T Consensus        84 ~~-----~-------~~~~~~-~~l~~aa~~--~g~v~~~V~~SS~~~~~~~~-------~~~~~y~~s----------K  131 (352)
T 1xgk_A           84 QA-----G-------DEIAIG-KDLADAAKR--AGTIQHYIYSSMPDHSLYGP-------WPAVPMWAP----------K  131 (352)
T ss_dssp             TT-----S-------CHHHHH-HHHHHHHHH--HSCCSEEEEEECCCGGGTSS-------CCCCTTTHH----------H
T ss_pred             CC-----c-------HHHHHH-HHHHHHHHH--cCCccEEEEeCCccccccCC-------CCCccHHHH----------H
Confidence            21     1       235666 899999998  77 89999999984 23431       122234433          3


Q ss_pred             HHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc-cchHHHHHHHhCCC----CCCCCCccccccH-HHHHHHHHHHhc
Q 017977          205 LVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAGGP----LGSGQQWFSWIHL-DDIVNLIYEALS  278 (363)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~-~~~~~~~~~~~~~~----~~~~~~~~~~i~v-~D~a~a~~~~~~  278 (363)
                      +..   +....  ..+++++++||+ +||++.... ..++.......+..    ++.+++.++++++ +|+|++++.++.
T Consensus       132 ~~~---E~~~~--~~gi~~~ivrpg-~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~  205 (352)
T 1xgk_A          132 FTV---ENYVR--QLGLPSTFVYAG-IYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFK  205 (352)
T ss_dssp             HHH---HHHHH--TSSSCEEEEEEC-EEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHH
T ss_pred             HHH---HHHHH--HcCCCEEEEecc-eecCCchhcccccccccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHHh
Confidence            222   22222  238999999986 688754211 11100000112221    2456788999999 899999999998


Q ss_pred             CCC---CCceEEeeCCCCcCHHHHHHHHHHHhCCC
Q 017977          279 NPS---YRGVINGTAPNPVRLAEMCDHLGNVLGRP  310 (363)
Q Consensus       279 ~~~---~~g~~~i~~~~~~s~~el~~~i~~~~g~~  310 (363)
                      ++.   .+++||+++ +.+|+.|+++.+.+.+|++
T Consensus       206 ~~~~~~~g~~~~l~~-~~~s~~e~~~~i~~~~G~~  239 (352)
T 1xgk_A          206 DGPQKWNGHRIALTF-ETLSPVQVCAAFSRALNRR  239 (352)
T ss_dssp             HCHHHHTTCEEEECS-EEECHHHHHHHHHHHHTSC
T ss_pred             CCchhhCCeEEEEec-CCCCHHHHHHHHHHHHCCC
Confidence            652   456999996 6799999999999999987

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.92  E-value=1e-23  Score=180.57  Aligned_cols=200  Identities=13%  Similarity=0.114  Sum_probs=134.9

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCC-CEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      .+||+||||||+|+||++|+++|+++| ++|++++|++++...+...  ......+|+.|.+++.++++++|+|||+++.
T Consensus        21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~--~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~~   98 (236)
T 3qvo_A           21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPT--NSQIIMGDVLNHAALKQAMQGQDIVYANLTG   98 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCT--TEEEEECCTTCHHHHHHHHTTCSEEEEECCS
T ss_pred             CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccccC--CcEEEEecCCCHHHHHHHhcCCCEEEEcCCC
Confidence            446789999999999999999999999 9999999998765543321  1224568999999999999999999999985


Q ss_pred             CCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCccc---ccccCCCcchhhhhhhcccchhh
Q 017977          127 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAH---QEMITWLSDYCAKVYCLVSFNRG  203 (363)
Q Consensus       127 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~---~e~~~~~~~~~~~~~~~~~y~~~  203 (363)
                      .     ..          ...++++++++++  .++++||++||. ++|+..+.   .........+...      |.  
T Consensus        99 ~-----~~----------~~~~~~~~~~~~~--~~~~~iV~iSS~-~~~~~~~~~~~~~~~~~~~~~~~~------~~--  152 (236)
T 3qvo_A           99 E-----DL----------DIQANSVIAAMKA--CDVKRLIFVLSL-GIYDEVPGKFVEWNNAVIGEPLKP------FR--  152 (236)
T ss_dssp             T-----TH----------HHHHHHHHHHHHH--TTCCEEEEECCC-CC----------------CGGGHH------HH--
T ss_pred             C-----ch----------hHHHHHHHHHHHH--cCCCEEEEEecc-eecCCCCcccccchhhcccchHHH------HH--
Confidence            2     10          1235689999999  788999999999 77772111   1111111111111      11  


Q ss_pred             HHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHHHHHhcCCC--
Q 017977          204 VLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS--  281 (363)
Q Consensus       204 k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~--  281 (363)
                           ..+...  ...+++++++||+.++++........      ..+.+     ....+++++|+|++++.++.++.  
T Consensus       153 -----~~~~~l--~~~gi~~~~vrPg~i~~~~~~~~~~~------~~~~~-----~~~~~i~~~DvA~~i~~ll~~~~~~  214 (236)
T 3qvo_A          153 -----RAADAI--EASGLEYTILRPAWLTDEDIIDYELT------SRNEP-----FKGTIVSRKSVAALITDIIDKPEKH  214 (236)
T ss_dssp             -----HHHHHH--HTSCSEEEEEEECEEECCSCCCCEEE------CTTSC-----CSCSEEEHHHHHHHHHHHHHSTTTT
T ss_pred             -----HHHHHH--HHCCCCEEEEeCCcccCCCCcceEEe------ccCCC-----CCCcEECHHHHHHHHHHHHcCcccc
Confidence                 111111  23499999999999998754321110      01111     11258999999999999998876  


Q ss_pred             CCceEEeeCCCC
Q 017977          282 YRGVINGTAPNP  293 (363)
Q Consensus       282 ~~g~~~i~~~~~  293 (363)
                      .++.|++++++.
T Consensus       215 ~g~~~~i~~~~~  226 (236)
T 3qvo_A          215 IGENIGINQPGT  226 (236)
T ss_dssp             TTEEEEEECSSC
T ss_pred             cCeeEEecCCCC
Confidence            455999998753

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.91  E-value=1.5e-24  Score=190.77  Aligned_cols=239  Identities=14%  Similarity=0.003  Sum_probs=158.5

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCC-CCccccCcccccCcchHHhhcc-------CCCEE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTAV  120 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~d~V  120 (363)
                      ++++|+||||+|+||++++++|+++|++|++++|+.......... ........+|+.|.+++.++++       ++|+|
T Consensus         4 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~l   83 (281)
T 3m1a_A            4 SAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDVL   83 (281)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence            457899999999999999999999999999999988765443211 1112245689999988887775       78999


Q ss_pred             EEccCCCCCC---CCChhhHHHHHHHHHHH----HHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhhh
Q 017977          121 VNLAGTPIGT---RWSSEIKKEIKESRIRV----TSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAK  193 (363)
Q Consensus       121 i~~a~~~~~~---~~~~~~~~~~~~~n~~~----~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~  193 (363)
                      ||+||.....   ..+.+..+..+++|+.+    ++.+++.+++  .+..++|++||..+.++       .++...|..+
T Consensus        84 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~~~~~iv~~sS~~~~~~-------~~~~~~Y~~s  154 (281)
T 3m1a_A           84 VNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRE--RGSGSVVNISSFGGQLS-------FAGFSAYSAT  154 (281)
T ss_dssp             EECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCEEEEEECCGGGTCC-------CTTCHHHHHH
T ss_pred             EECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCCEEEEEcCccccCC-------CCCchHHHHH
Confidence            9999974322   34556778899999999    5555555565  56778999999854322       2333455555


Q ss_pred             hhhcccchhhHHHHHHHHHHHhc--cCCCceEEEEeeceEEeCCCCc--------ccchHHHHHHHhCCCCCCCCCcccc
Q 017977          194 VYCLVSFNRGVLVCREWEGTALK--VNKDVRLALIRIGIVLGKDGGA--------LAKMIPLFMMFAGGPLGSGQQWFSW  263 (363)
Q Consensus       194 ~~~~~~y~~~k~~~~~~~~~~~~--~~~~~~~~ilRp~~v~g~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~  263 (363)
                      |.+          ...+......  ...|+++++++||.+.++..+.        ...+.......  .++........+
T Consensus       155 K~a----------~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~  222 (281)
T 3m1a_A          155 KAA----------LEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPT--RQLVQGSDGSQP  222 (281)
T ss_dssp             HHH----------HHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHH--HHHHHC-----C
T ss_pred             HHH----------HHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHH--HHHHhhccCCCC
Confidence            422          2222111111  1138999999999998874221        11111111000  001011223457


Q ss_pred             ccHHHHHHHHHHHhcCCCCCceEEeeCCCCcCHHHHHHHHHHHhC
Q 017977          264 IHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLG  308 (363)
Q Consensus       264 i~v~D~a~a~~~~~~~~~~~g~~~i~~~~~~s~~el~~~i~~~~g  308 (363)
                      .+++|+|++++.+++++...+.|+++++......+....+.+.++
T Consensus       223 ~~~~dva~a~~~~~~~~~~~~~~~l~s~~~~~i~g~~~~i~~~~~  267 (281)
T 3m1a_A          223 GDPAKAAAAIRLALDTEKTPLRLALGGDAVDFLTGHLDSVRAELT  267 (281)
T ss_dssp             BCHHHHHHHHHHHHHSSSCCSEEEESHHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHhCCCCCeEEecCchHHHHHHHHHHHHHHHHH
Confidence            889999999999999887777999999876677777777776664

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.91  E-value=2.1e-24  Score=187.02  Aligned_cols=228  Identities=13%  Similarity=0.002  Sum_probs=148.8

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc----CCCEEEEccC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ----GSTAVVNLAG  125 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~----~~d~Vi~~a~  125 (363)
                      ||+||||||+|+||++++++|+++|++|++++|+..+...         ...+|+.+.+++.++++    ++|+|||+||
T Consensus         1 Mk~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---------~~~~D~~~~~~~~~~~~~~~~~~d~vi~~Ag   71 (255)
T 2dkn_A            1 MSVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA---------DLSTPGGRETAVAAVLDRCGGVLDGLVCCAG   71 (255)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC---------CTTSHHHHHHHHHHHHHHHTTCCSEEEECCC
T ss_pred             CcEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc---------cccCCcccHHHHHHHHHHcCCCccEEEECCC
Confidence            4689999999999999999999999999999998765432         13479999888888776    8999999999


Q ss_pred             CCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCc----ccccccCCCcc----hhh--h
Q 017977          126 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRA----AHQEMITWLSD----YCA--K  193 (363)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~----~~~e~~~~~~~----~~~--~  193 (363)
                      ....    ....+..+++|+.++.++++++.+.  ..+.+++|++||. ..|+..    +..|.....+.    ...  .
T Consensus        72 ~~~~----~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (255)
T 2dkn_A           72 VGVT----AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSI-AATQPGAAELPMVEAMLAGDEARAIELAEQQ  146 (255)
T ss_dssp             CCTT----SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCG-GGGSTTGGGCHHHHHHHHTCHHHHHHHHHHH
T ss_pred             CCCc----chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEecc-ccccccccccchhhhhcccchhhhhhhcccc
Confidence            7421    2346789999999999999987763  2356789999999 555411    11110000000    000  0


Q ss_pred             hhhcccchhhHHHHHHHHHHHhcc--CCCceEEEEeeceEEeCCCCcc-c-chHHHHHHHhCCCCCCCCCccccccHHHH
Q 017977          194 VYCLVSFNRGVLVCREWEGTALKV--NKDVRLALIRIGIVLGKDGGAL-A-KMIPLFMMFAGGPLGSGQQWFSWIHLDDI  269 (363)
Q Consensus       194 ~~~~~~y~~~k~~~~~~~~~~~~~--~~~~~~~ilRp~~v~g~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  269 (363)
                      ......|..+|.....+.......  ..|++++++||+.++|+..... . ....  .....  +. + ...++++++|+
T Consensus       147 ~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~~~~~~~--~~~~~--~~-~-~~~~~~~~~dv  220 (255)
T 2dkn_A          147 GQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPRYG--ESTRR--FV-A-PLGRGSEPREV  220 (255)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHHHCTTTH--HHHHS--CC-C-TTSSCBCHHHH
T ss_pred             CCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcccchhhH--HHHHH--HH-H-HhcCCCCHHHH
Confidence            012234666665444433332221  1489999999999998742111 0 0000  00110  01 1 33468999999


Q ss_pred             HHHHHHHhcCC--CC-CceEEeeCCCCcCHH
Q 017977          270 VNLIYEALSNP--SY-RGVINGTAPNPVRLA  297 (363)
Q Consensus       270 a~a~~~~~~~~--~~-~g~~~i~~~~~~s~~  297 (363)
                      |++++.+++.+  .. +..|++.++..++.+
T Consensus       221 a~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~  251 (255)
T 2dkn_A          221 AEAIAFLLGPQASFIHGSVLFVDGGMDALMR  251 (255)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTHHHHHC
T ss_pred             HHHHHHHhCCCcccceeeEEEecCCeEeeee
Confidence            99999999765  23 448999988655544

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.91  E-value=6.1e-25  Score=195.83  Aligned_cols=221  Identities=16%  Similarity=0.189  Sum_probs=150.7

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcc---c------ccCCCCCccccCcccccCcchHHhhccCCCEE
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA---E------LIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAV  120 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~---~------~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~V  120 (363)
                      ||+|+||||||++|++|++.|+++|++|++++|+....   .      .+.. . ......+|+.|.+++.++++++|+|
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~-~-~v~~v~~D~~d~~~l~~~~~~~d~v   81 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKA-S-GANIVHGSIDDHASLVEAVKNVDVV   81 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHT-T-TCEEECCCTTCHHHHHHHHHTCSEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHh-C-CCEEEEeccCCHHHHHHHHcCCCEE
Confidence            57899999999999999999999999999999986432   0      0101 1 1124567999999999999999999


Q ss_pred             EEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCC-CCCeEEEeccceecCCcccccccCCCcchhhhhhhccc
Q 017977          121 VNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEG-VRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVS  199 (363)
Q Consensus       121 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~~  199 (363)
                      ||+++..                ++.++.+++++|.+  .+ +++||+ |+    ||. ..++..+..+ ..      ..
T Consensus        82 i~~a~~~----------------~~~~~~~l~~aa~~--~g~v~~~v~-S~----~g~-~~~~~~~~~p-~~------~~  130 (308)
T 1qyc_A           82 ISTVGSL----------------QIESQVNIIKAIKE--VGTVKRFFP-SE----FGN-DVDNVHAVEP-AK------SV  130 (308)
T ss_dssp             EECCCGG----------------GSGGGHHHHHHHHH--HCCCSEEEC-SC----CSS-CTTSCCCCTT-HH------HH
T ss_pred             EECCcch----------------hhhhHHHHHHHHHh--cCCCceEee-cc----ccc-CccccccCCc-ch------hH
Confidence            9999852                14567899999999  77 888773 43    331 1122222111 00      11


Q ss_pred             chhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCC---CCCCCCccccccHHHHHHHHHHH
Q 017977          200 FNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGP---LGSGQQWFSWIHLDDIVNLIYEA  276 (363)
Q Consensus       200 y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~v~D~a~a~~~~  276 (363)
                      | .+|...+..   ..  ..+++++++||+.++|+.........  .....+..   +++++..+++++++|+|++++.+
T Consensus       131 y-~sK~~~e~~---~~--~~~~~~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  202 (308)
T 1qyc_A          131 F-EVKAKVRRA---IE--AEGIPYTYVSSNCFAGYFLRSLAQAG--LTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKA  202 (308)
T ss_dssp             H-HHHHHHHHH---HH--HHTCCBEEEECCEEHHHHTTTTTCTT--CSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTT
T ss_pred             H-HHHHHHHHH---HH--hcCCCeEEEEeceecccccccccccc--ccCCCCCceEEecCCCceEEEecHHHHHHHHHHH
Confidence            3 333322222   21  23899999999999875322111100  00001111   25677889999999999999999


Q ss_pred             hcCCCC-CceEEeeCC-CCcCHHHHHHHHHHHhCCCC
Q 017977          277 LSNPSY-RGVINGTAP-NPVRLAEMCDHLGNVLGRPS  311 (363)
Q Consensus       277 ~~~~~~-~g~~~i~~~-~~~s~~el~~~i~~~~g~~~  311 (363)
                      +.++.. +++|++.++ +.+|+.|+++.+.+.+|++.
T Consensus       203 l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~  239 (308)
T 1qyc_A          203 VDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDKTL  239 (308)
T ss_dssp             SSCGGGTTEEEECCCGGGEEEHHHHHHHHHHHTTSCC
T ss_pred             HhCccccCeEEEEeCCCCccCHHHHHHHHHHHhCCCC
Confidence            987653 457888764 68999999999999999873

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.90  E-value=5.1e-24  Score=190.75  Aligned_cols=217  Identities=14%  Similarity=0.156  Sum_probs=149.4

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccc-cCC-CCCccccCcccccCcchHHhhccCCCEEEEccCCCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL-IFP-GKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPI  128 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~-~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~~~  128 (363)
                      ++|+||||||++|++|+++|+++|++|++++|+++.... +.. .........+|+.|.+++.++++++|+|||+++.. 
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a~~~-   90 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISALAFP-   90 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCCGG-
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEECCchh-
Confidence            489999999999999999999999999999998752211 100 00011245679999999999999999999999852 


Q ss_pred             CCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCC-CCCeEEEeccceecCCcccccccCCCcchhhhhhhcccchhhHHHH
Q 017977          129 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEG-VRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRGVLVC  207 (363)
Q Consensus       129 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~~y~~~k~~~  207 (363)
                                     ++.++.++++++.+  .+ +++||+ |+    ||.. .++..+..+ .      ...| .+|...
T Consensus        91 ---------------~~~~~~~l~~aa~~--~g~v~~~v~-S~----~g~~-~~~~~~~~p-~------~~~y-~sK~~~  139 (318)
T 2r6j_A           91 ---------------QILDQFKILEAIKV--AGNIKRFLP-SD----FGVE-EDRINALPP-F------EALI-ERKRMI  139 (318)
T ss_dssp             ---------------GSTTHHHHHHHHHH--HCCCCEEEC-SC----CSSC-TTTCCCCHH-H------HHHH-HHHHHH
T ss_pred             ---------------hhHHHHHHHHHHHh--cCCCCEEEe-ec----cccC-cccccCCCC-c------chhH-HHHHHH
Confidence                           14567899999998  77 888774 43    3310 122121111 0      0113 334322


Q ss_pred             HHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHH-H-HhCCC---CCCCCCccccccHHHHHHHHHHHhcCCCC
Q 017977          208 REWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFM-M-FAGGP---LGSGQQWFSWIHLDDIVNLIYEALSNPSY  282 (363)
Q Consensus       208 ~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~-~-~~~~~---~~~~~~~~~~i~v~D~a~a~~~~~~~~~~  282 (363)
                      +...   .  ..+++++++||+.+++.       +.+.+. . ..+..   +++++..+++++++|+|++++.++.++..
T Consensus       140 e~~~---~--~~~~~~~~lr~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~  207 (318)
T 2r6j_A          140 RRAI---E--EANIPYTYVSANCFASY-------FINYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPRA  207 (318)
T ss_dssp             HHHH---H--HTTCCBEEEECCEEHHH-------HHHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTCGGG
T ss_pred             HHHH---H--hcCCCeEEEEcceehhh-------hhhhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHhcCccc
Confidence            2222   1  24899999999987753       122211 0 12222   25677889999999999999999987653


Q ss_pred             -CceEEeeC-CCCcCHHHHHHHHHHHhCCCC
Q 017977          283 -RGVINGTA-PNPVRLAEMCDHLGNVLGRPS  311 (363)
Q Consensus       283 -~g~~~i~~-~~~~s~~el~~~i~~~~g~~~  311 (363)
                       +++|++.+ ++.+|+.|+++.+.+.+|++.
T Consensus       208 ~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~  238 (318)
T 2r6j_A          208 LNRVVIYRPSTNIITQLELISRWEKKIGKKF  238 (318)
T ss_dssp             TTEEEECCCGGGEEEHHHHHHHHHHHHTCCC
T ss_pred             cCeEEEecCCCCccCHHHHHHHHHHHhCCCC
Confidence             45788875 478999999999999999873

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.90  E-value=1.7e-23  Score=183.78  Aligned_cols=236  Identities=10%  Similarity=0.002  Sum_probs=159.9

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccC---CCCCccccCcccccCcchHHhhcc-------CCC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF---PGKKTRFFPGVMIAEEPQWRDCIQ-------GST  118 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~d~~~~~~~~~~~~-------~~d  118 (363)
                      .+++|+||||+|+||++++++|+++|++|++++|+........   ..........+|+.|.+++.++++       ++|
T Consensus        15 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   94 (278)
T 2bgk_A           15 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLD   94 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            3468999999999999999999999999999999865432211   111112245689999998887775       789


Q ss_pred             EEEEccCCCCC-----CCCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccC-CCcch
Q 017977          119 AVVNLAGTPIG-----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMIT-WLSDY  190 (363)
Q Consensus       119 ~Vi~~a~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~-~~~~~  190 (363)
                      +|||+||....     .....+..+..+++|+.++.++++++.+.  ..+.+++|++||. ..|..      .+ ....|
T Consensus        95 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~-~~~~~------~~~~~~~Y  167 (278)
T 2bgk_A           95 IMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASI-SSFTA------GEGVSHVY  167 (278)
T ss_dssp             EEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCG-GGTCC------CTTSCHHH
T ss_pred             EEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeec-cccCC------CCCCCcch
Confidence            99999996432     12344667889999999999999988763  1256689999998 43331      11 22344


Q ss_pred             hhhhhhcccchhhHHHHHHHHHHHhc--cCCCceEEEEeeceEEeCCCCcc----cchHHHHHHHhCCCCCCCCCccccc
Q 017977          191 CAKVYCLVSFNRGVLVCREWEGTALK--VNKDVRLALIRIGIVLGKDGGAL----AKMIPLFMMFAGGPLGSGQQWFSWI  264 (363)
Q Consensus       191 ~~~~~~~~~y~~~k~~~~~~~~~~~~--~~~~~~~~ilRp~~v~g~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~i  264 (363)
                      ..+          |.....+......  ...|++++++||+.++++.....    ......+.....      .....++
T Consensus       168 ~~s----------K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~  231 (278)
T 2bgk_A          168 TAT----------KHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAA------NLKGTLL  231 (278)
T ss_dssp             HHH----------HHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTC------SSCSCCC
T ss_pred             HHH----------HHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhccc------ccccccC
Confidence            444          3332222222111  12389999999999999864321    111111111111      1123589


Q ss_pred             cHHHHHHHHHHHhcCCC--C-CceEEeeCCCCcCHHHHHHHHHHHh
Q 017977          265 HLDDIVNLIYEALSNPS--Y-RGVINGTAPNPVRLAEMCDHLGNVL  307 (363)
Q Consensus       265 ~v~D~a~a~~~~~~~~~--~-~g~~~i~~~~~~s~~el~~~i~~~~  307 (363)
                      +++|+|++++.++....  . +..|++.++..+++.|+++.+.+.+
T Consensus       232 ~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e~~~~i~~~~  277 (278)
T 2bgk_A          232 RAEDVADAVAYLAGDESKYVSGLNLVIDGGYTRTNPAFPTALKHGL  277 (278)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCCTHHHHHSCSCC
T ss_pred             CHHHHHHHHHHHcCcccccCCCCEEEECCcccccCCccchhhhhhc
Confidence            99999999999996532  3 4489999998999999999887654

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.90  E-value=1.9e-24  Score=192.50  Aligned_cols=223  Identities=18%  Similarity=0.138  Sum_probs=149.8

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCC-------cccccCC-CCCccccCcccccCcchHHhhccCCCEEE
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS-------KAELIFP-GKKTRFFPGVMIAEEPQWRDCIQGSTAVV  121 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~-------~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi  121 (363)
                      ||+|+||||||+||++|+++|+++|++|++++|+++       +...+.. .........+|+.|.+++.++++++|+||
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi   81 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIVI   81 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCCCEEE
Confidence            578999999999999999999999999999999871       1111100 00011245679999999999999999999


Q ss_pred             EccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCC-CCCeEEEeccceecCCcccccccCCCcchhhhhhhcccc
Q 017977          122 NLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEG-VRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVSF  200 (363)
Q Consensus       122 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~~y  200 (363)
                      |+++...                +.++.++++++.+  .+ +++||+ |+    ||.. .++..+..+ ..      ..|
T Consensus        82 ~~a~~~~----------------~~~~~~l~~aa~~--~g~v~~~v~-S~----~g~~-~~~~~~~~p-~~------~~y  130 (307)
T 2gas_A           82 CAAGRLL----------------IEDQVKIIKAIKE--AGNVKKFFP-SE----FGLD-VDRHDAVEP-VR------QVF  130 (307)
T ss_dssp             ECSSSSC----------------GGGHHHHHHHHHH--HCCCSEEEC-SC----CSSC-TTSCCCCTT-HH------HHH
T ss_pred             ECCcccc----------------cccHHHHHHHHHh--cCCceEEee-cc----cccC-cccccCCCc-ch------hHH
Confidence            9998631                4567899999998  77 888773 33    3311 122122111 00      113


Q ss_pred             hhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCC---CCCCCCccccccHHHHHHHHHHHh
Q 017977          201 NRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGP---LGSGQQWFSWIHLDDIVNLIYEAL  277 (363)
Q Consensus       201 ~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~v~D~a~a~~~~~  277 (363)
                       .+|...+..   ..  ..+++++++||+.++++.........  .....+..   +++++..+++++++|+|++++.++
T Consensus       131 -~sK~~~e~~---~~--~~~i~~~~lrp~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l  202 (307)
T 2gas_A          131 -EEKASIRRV---IE--AEGVPYTYLCCHAFTGYFLRNLAQLD--ATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAA  202 (307)
T ss_dssp             -HHHHHHHHH---HH--HHTCCBEEEECCEETTTTGGGTTCTT--CSSCCSSEEEEETTSCSEEEEECHHHHHHHHHHHH
T ss_pred             -HHHHHHHHH---HH--HcCCCeEEEEcceeeccccccccccc--cccCCCCeEEEecCCCcceEEeeHHHHHHHHHHHH
Confidence             334322222   21  23899999999998875322111100  00001111   256677899999999999999999


Q ss_pred             cCCCC-CceEEeeCC-CCcCHHHHHHHHHHHhCCCC
Q 017977          278 SNPSY-RGVINGTAP-NPVRLAEMCDHLGNVLGRPS  311 (363)
Q Consensus       278 ~~~~~-~g~~~i~~~-~~~s~~el~~~i~~~~g~~~  311 (363)
                      .++.. ++.|++.++ +.+|+.|+++.+.+.+|++.
T Consensus       203 ~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~  238 (307)
T 2gas_A          203 NDPNTLNKAVHIRLPKNYLTQNEVIALWEKKIGKTL  238 (307)
T ss_dssp             TCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTSCC
T ss_pred             cCccccCceEEEeCCCCcCCHHHHHHHHHHHhCCCC
Confidence            87653 447888764 68999999999999999873

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.90  E-value=8.2e-24  Score=189.66  Aligned_cols=219  Identities=11%  Similarity=0.115  Sum_probs=150.8

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCC-Cc-----ccccCC-CCCccccCcccccCcchHHhhccCCCEEE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR-SK-----AELIFP-GKKTRFFPGVMIAEEPQWRDCIQGSTAVV  121 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~-----~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi  121 (363)
                      +||+|+||||||+||++|+++|+++|++|++++|++ +.     ...+.. .........+|+.|.+++.++++++|+||
T Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~d~vi   82 (321)
T 3c1o_A            3 HMEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDIVI   82 (321)
T ss_dssp             -CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred             cccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCCCEEE
Confidence            357899999999999999999999999999999987 21     110000 00011245679999999999999999999


Q ss_pred             EccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCC-CCCeEEEeccceecCCcccccccCCCcchhhhhhhcccc
Q 017977          122 NLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEG-VRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVSF  200 (363)
Q Consensus       122 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~~y  200 (363)
                      |+++..                ++.++.++++++.+  .+ +++||+ |    +||.. .+|..+..+ .      ...|
T Consensus        83 ~~a~~~----------------~~~~~~~l~~aa~~--~g~v~~~v~-S----~~g~~-~~~~~~~~p-~------~~~y  131 (321)
T 3c1o_A           83 SALPFP----------------MISSQIHIINAIKA--AGNIKRFLP-S----DFGCE-EDRIKPLPP-F------ESVL  131 (321)
T ss_dssp             ECCCGG----------------GSGGGHHHHHHHHH--HCCCCEEEC-S----CCSSC-GGGCCCCHH-H------HHHH
T ss_pred             ECCCcc----------------chhhHHHHHHHHHH--hCCccEEec-c----ccccC-ccccccCCC-c------chHH
Confidence            999852                15667899999998  77 888872 3    23311 122222111 0      1124


Q ss_pred             hhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHH-----HhCCC---CCCCCCccccccHHHHHHH
Q 017977          201 NRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMM-----FAGGP---LGSGQQWFSWIHLDDIVNL  272 (363)
Q Consensus       201 ~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~-----~~~~~---~~~~~~~~~~i~v~D~a~a  272 (363)
                       .+|...+....     ..+++++++||+.++++.       .+.+..     ..+..   +++++..+++++++|+|++
T Consensus       132 -~sK~~~e~~~~-----~~~~~~~~lrp~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  198 (321)
T 3c1o_A          132 -EKKRIIRRAIE-----AAALPYTYVSANCFGAYF-------VNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKY  198 (321)
T ss_dssp             -HHHHHHHHHHH-----HHTCCBEEEECCEEHHHH-------HHHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHH
T ss_pred             -HHHHHHHHHHH-----HcCCCeEEEEeceecccc-------ccccccccccccccCceEEecCCCcceeEeeHHHHHHH
Confidence             44433332221     238999999999888742       111110     11222   2567788999999999999


Q ss_pred             HHHHhcCCCC-CceEEeeC-CCCcCHHHHHHHHHHHhCCCC
Q 017977          273 IYEALSNPSY-RGVINGTA-PNPVRLAEMCDHLGNVLGRPS  311 (363)
Q Consensus       273 ~~~~~~~~~~-~g~~~i~~-~~~~s~~el~~~i~~~~g~~~  311 (363)
                      ++.++.++.. +++|++.+ ++.+|+.|+++.+.+.+|++.
T Consensus       199 ~~~~l~~~~~~g~~~~~~g~~~~~t~~e~~~~~~~~~g~~~  239 (321)
T 3c1o_A          199 TIKVACDPRCCNRIVIYRPPKNIISQNELISLWEAKSGLSF  239 (321)
T ss_dssp             HHHHHHCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTSCC
T ss_pred             HHHHHhCccccCeEEEEeCCCCcccHHHHHHHHHHHcCCcc
Confidence            9999987664 44788876 478999999999999999874

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.89  E-value=7.6e-23  Score=173.34  Aligned_cols=200  Identities=12%  Similarity=0.113  Sum_probs=134.8

Q ss_pred             ccEEEEecCcchHHHHHHHHHH-hCCCEEEEEeCCCC-cccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQ-ADNHQVRVLTRSRS-KAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  127 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~-~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~~  127 (363)
                      |++|+||||+|+||++++++|+ ++|++|++++|++. ....+...........+|+.|.+++.++++++|+|||+|+..
T Consensus         5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag~~   84 (221)
T 3r6d_A            5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAMES   84 (221)
T ss_dssp             CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEESCCCC
T ss_pred             EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEEcCCCC
Confidence            3459999999999999999999 89999999999877 544331011112245679999999999999999999999852


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhcc-cchhhHHH
Q 017977          128 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLV-SFNRGVLV  206 (363)
Q Consensus       128 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~-~y~~~k~~  206 (363)
                                      |+. ++++++++++  .+.+++|++||. ++|+..+....     .+...  ... .|..+|..
T Consensus        85 ----------------n~~-~~~~~~~~~~--~~~~~iv~iSs~-~~~~~~~~~~~-----~~~~~--~~~~~y~~~K~~  137 (221)
T 3r6d_A           85 ----------------GSD-MASIVKALSR--XNIRRVIGVSMA-GLSGEFPVALE-----KWTFD--NLPISYVQGERQ  137 (221)
T ss_dssp             ----------------HHH-HHHHHHHHHH--TTCCEEEEEEET-TTTSCSCHHHH-----HHHHH--TSCHHHHHHHHH
T ss_pred             ----------------Chh-HHHHHHHHHh--cCCCeEEEEeec-eecCCCCcccc-----ccccc--ccccHHHHHHHH
Confidence                            334 8899999999  788899999998 66651110000     00000  001 24444433


Q ss_pred             HHHHHHHHhccCCCceEEEEeeceEEeCCC-CcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHHHHHh--cCCC--
Q 017977          207 CREWEGTALKVNKDVRLALIRIGIVLGKDG-GALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEAL--SNPS--  281 (363)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~--~~~~--  281 (363)
                      .+....     ..+++++++||+.++++.. ......      ..+.+     ....+++.+|+|++++.++  +++.  
T Consensus       138 ~e~~~~-----~~~i~~~~vrpg~v~~~~~~~~~~~~------~~~~~-----~~~~~~~~~dvA~~~~~l~~~~~~~~~  201 (221)
T 3r6d_A          138 ARNVLR-----ESNLNYTILRLTWLYNDPEXTDYELI------PEGAQ-----FNDAQVSREAVVKAIFDILHAADETPF  201 (221)
T ss_dssp             HHHHHH-----HSCSEEEEEEECEEECCTTCCCCEEE------CTTSC-----CCCCEEEHHHHHHHHHHHHTCSCCGGG
T ss_pred             HHHHHH-----hCCCCEEEEechhhcCCCCCcceeec------cCCcc-----CCCceeeHHHHHHHHHHHHHhcChhhh
Confidence            332221     2489999999999998832 221110      00111     1123899999999999999  7765  


Q ss_pred             CCceEEeeCCC
Q 017977          282 YRGVINGTAPN  292 (363)
Q Consensus       282 ~~g~~~i~~~~  292 (363)
                      .++.+.+.++.
T Consensus       202 ~~~~~~i~~~~  212 (221)
T 3r6d_A          202 HRTSIGVGEPG  212 (221)
T ss_dssp             TTEEEEEECTT
T ss_pred             hcceeeecCCC
Confidence            34577777653

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.89  E-value=6.5e-23  Score=179.95  Aligned_cols=237  Identities=14%  Similarity=0.096  Sum_probs=144.4

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCccccc-------CCCCCccccCcccccCcchHHhhcc------
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI-------FPGKKTRFFPGVMIAEEPQWRDCIQ------  115 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~~~~~~~~~d~~~~~~~~~~~~------  115 (363)
                      .+++|+||||+|+||+++++.|+++|++|++++|+..+....       ...........+|+.|.+++.++++      
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (278)
T 1spx_A            5 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF   84 (278)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHHc
Confidence            346899999999999999999999999999999987543321       1111112244579999988888776      


Q ss_pred             -CCCEEEEccCCCCCC---CC----ChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccce-ecCCccccccc
Q 017977          116 -GSTAVVNLAGTPIGT---RW----SSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPK-YLMRAAHQEMI  184 (363)
Q Consensus       116 -~~d~Vi~~a~~~~~~---~~----~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~-~yg~~~~~e~~  184 (363)
                       ++|+|||+||.....   ..    +.+..+..+++|+.++.++++++.+.  ..+ .++|++||.++ ..+       .
T Consensus        85 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~-------~  156 (278)
T 1spx_A           85 GKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHA-------T  156 (278)
T ss_dssp             SCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSC-------C
T ss_pred             CCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEecccccccC-------C
Confidence             799999999974321   12    55667889999999999999988762  114 78999999843 221       1


Q ss_pred             CCCcchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc----cch---HHHH-HHHhCCCCCC
Q 017977          185 TWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL----AKM---IPLF-MMFAGGPLGS  256 (363)
Q Consensus       185 ~~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~----~~~---~~~~-~~~~~~~~~~  256 (363)
                      +....|..+|.+...+.++       ....+. ..|+++++++|+.+.++.....    ...   .... ......++  
T Consensus       157 ~~~~~Y~~sK~a~~~~~~~-------la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--  226 (278)
T 1spx_A          157 PDFPYYSIAKAAIDQYTRN-------TAIDLI-QHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPA--  226 (278)
T ss_dssp             TTSHHHHHHHHHHHHHHHH-------HHHHHG-GGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTT--
T ss_pred             CCccHHHHHHHHHHHHHHH-------HHHHHH-hcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhcCCC--
Confidence            2233455554332222211       111111 2389999999999998753211    011   0001 11111122  


Q ss_pred             CCCccccccHHHHHHHHHHHhcCCC---C-CceEEeeCCCCcCHHHHHHHHHHHh
Q 017977          257 GQQWFSWIHLDDIVNLIYEALSNPS---Y-RGVINGTAPNPVRLAEMCDHLGNVL  307 (363)
Q Consensus       257 ~~~~~~~i~v~D~a~a~~~~~~~~~---~-~g~~~i~~~~~~s~~el~~~i~~~~  307 (363)
                          ..+++++|+|++++.++..+.   . +..+++.+|..++..++++.+.+.+
T Consensus       227 ----~~~~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdgG~~~~~~~~~~~~~~~~  277 (278)
T 1spx_A          227 ----GVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSSLIMGLHCQDFAKLL  277 (278)
T ss_dssp             ----SSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC------------
T ss_pred             ----cCCCCHHHHHHHHHHHcCccccCcccCcEEEECCCcccccCcccccHHHHh
Confidence                247899999999999987532   2 3489999998899999999988764

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.89  E-value=6.3e-23  Score=177.75  Aligned_cols=223  Identities=14%  Similarity=0.048  Sum_probs=149.0

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCC----CCCccccCcccccCcchHHhhcc-------CC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (363)
                      .+++|+||||+|+||++++++|+++|++|++++|+.........    .........+|+.|.+++.++++       ++
T Consensus        10 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   89 (255)
T 1fmc_A           10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKV   89 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            44799999999999999999999999999999998754332111    11112244589999988887775       79


Q ss_pred             CEEEEccCCCCCC--CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhh
Q 017977          118 TAVVNLAGTPIGT--RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAK  193 (363)
Q Consensus       118 d~Vi~~a~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~  193 (363)
                      |+|||+||.....  ..+.+..+..+++|+.++.++++++.+.  ..+.+++|++||. ..+.      ..++...|..+
T Consensus        90 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~-~~~~------~~~~~~~Y~~s  162 (255)
T 1fmc_A           90 DILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSM-AAEN------KNINMTSYASS  162 (255)
T ss_dssp             CEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCG-GGTC------CCTTCHHHHHH
T ss_pred             CEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcch-hhcC------CCCCCcccHHH
Confidence            9999999975332  2345667889999999999998888531  1356789999998 3332      11223345544


Q ss_pred             hhhcccchhhHHHHHHHHHHHhc--cCCCceEEEEeeceEEeCCCCc--ccchHHHHHHHhCCCCCCCCCccccccHHHH
Q 017977          194 VYCLVSFNRGVLVCREWEGTALK--VNKDVRLALIRIGIVLGKDGGA--LAKMIPLFMMFAGGPLGSGQQWFSWIHLDDI  269 (363)
Q Consensus       194 ~~~~~~y~~~k~~~~~~~~~~~~--~~~~~~~~ilRp~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  269 (363)
                      |          ............  ...+++++++||+.++++....  ...+..  ....+.++      ..+++++|+
T Consensus       163 K----------~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~--~~~~~~~~------~~~~~~~dv  224 (255)
T 1fmc_A          163 K----------AAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQ--KMLQHTPI------RRLGQPQDI  224 (255)
T ss_dssp             H----------HHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHH--HHHHTCSS------CSCBCHHHH
T ss_pred             H----------HHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhccChHHHH--HHHhcCCc------ccCCCHHHH
Confidence            3          222222221111  1248999999999999873211  111111  22233333      247899999


Q ss_pred             HHHHHHHhcCCC---CCceEEeeCCCCcCH
Q 017977          270 VNLIYEALSNPS---YRGVINGTAPNPVRL  296 (363)
Q Consensus       270 a~a~~~~~~~~~---~~g~~~i~~~~~~s~  296 (363)
                      |++++.++....   .+.+|++.++..+++
T Consensus       225 a~~~~~l~~~~~~~~~G~~~~v~gg~~~s~  254 (255)
T 1fmc_A          225 ANAALFLCSPAASWVSGQILTVSGGGVQEL  254 (255)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTSCCCC
T ss_pred             HHHHHHHhCCccccCCCcEEEECCceeccC
Confidence            999999997543   234999999887764

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.89  E-value=2.9e-23  Score=182.39  Aligned_cols=242  Identities=20%  Similarity=0.135  Sum_probs=161.9

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCccccc----CCCCC---ccccCcccccCcchHHhhcc-----
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI----FPGKK---TRFFPGVMIAEEPQWRDCIQ-----  115 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~~---~~~~~~~d~~~~~~~~~~~~-----  115 (363)
                      ..+++|+||||+|+||++++++|+++|++|++++|+.......    .....   ...+..+|+.|.+++.++++     
T Consensus         9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   88 (281)
T 3svt_A            9 FQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAW   88 (281)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            3457899999999999999999999999999999987653321    11111   22245689999988877765     


Q ss_pred             --CCCEEEEccCCCCC----CCCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCC
Q 017977          116 --GSTAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWL  187 (363)
Q Consensus       116 --~~d~Vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~  187 (363)
                        ++|+|||+||....    ...+.+..+..+++|+.++.++++++.+.  ..+..++|++||..+..+       .+..
T Consensus        89 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------~~~~  161 (281)
T 3svt_A           89 HGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNT-------HRWF  161 (281)
T ss_dssp             HSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSC-------CTTC
T ss_pred             cCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCC-------CCCC
Confidence              67999999996221    23455667889999999999999887653  133457999999843222       2233


Q ss_pred             cchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHH-HHHhCCCCCCCCCccccccH
Q 017977          188 SDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHL  266 (363)
Q Consensus       188 ~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v  266 (363)
                      ..|..+|.+...+.++       ....+. ..++++.+++||.+.++............ ......++      ..+.++
T Consensus       162 ~~Y~asK~a~~~l~~~-------la~e~~-~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~------~r~~~~  227 (281)
T 3svt_A          162 GAYGVTKSAVDHLMQL-------AADELG-ASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPL------PRQGEV  227 (281)
T ss_dssp             THHHHHHHHHHHHHHH-------HHHHHG-GGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHHHCSS------SSCBCH
T ss_pred             hhHHHHHHHHHHHHHH-------HHHHhh-hcCeEEEEEEeCcCcCcchhhcccCHHHHHHHHhcCCC------CCCCCH
Confidence            4565554332222211       111111 23899999999999887432110001111 11222232      246789


Q ss_pred             HHHHHHHHHHhcCCC---CCceEEeeCCCCcC-HHHHHHHHHHHhCCC
Q 017977          267 DDIVNLIYEALSNPS---YRGVINGTAPNPVR-LAEMCDHLGNVLGRP  310 (363)
Q Consensus       267 ~D~a~a~~~~~~~~~---~~g~~~i~~~~~~s-~~el~~~i~~~~g~~  310 (363)
                      +|+|++++.++....   .+..+++.+|..++ ..++++.+.+.+|.+
T Consensus       228 ~dva~~~~~l~s~~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~  275 (281)
T 3svt_A          228 EDVANMAMFLLSDAASFVTGQVINVDGGQMLRRGPDFSAMLEPVFGRD  275 (281)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTGGGSCCCCCHHHHHHHHCTT
T ss_pred             HHHHHHHHHHhCcccCCCCCCEEEeCCChhcccCCcchhccccccCCc
Confidence            999999999997543   34499998887776 778899999998876

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.89  E-value=9.9e-23  Score=175.31  Aligned_cols=219  Identities=19%  Similarity=0.104  Sum_probs=145.0

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc---CCCEEEEccC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ---GSTAVVNLAG  125 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~~d~Vi~~a~  125 (363)
                      .+|+|+||||+|+||++++++|+++|++|++++|+..................+|+.|.+++.++++   ++|+|||+||
T Consensus         6 ~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~Ag   85 (244)
T 1cyd_A            6 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNAA   85 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECCC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHHHHHHHcCCCCEEEECCc
Confidence            4479999999999999999999999999999999875543221110011133679999999988876   4799999999


Q ss_pred             CCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCC-CCCeEEEeccceecCCcccccccCCCcchhhhhhhccc
Q 017977          126 TPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVS  199 (363)
Q Consensus       126 ~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~-~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~~  199 (363)
                      .....   ....+..+..+++|+.++.++++++.+.  ..+ .+++|++||. ..|..      .+....|..+      
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~-~~~~~------~~~~~~Y~~s------  152 (244)
T 1cyd_A           86 LVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSM-VAHVT------FPNLITYSST------  152 (244)
T ss_dssp             CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCG-GGTSC------CTTBHHHHHH------
T ss_pred             ccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcch-hhcCC------CCCcchhHHH------
Confidence            64322   2345667889999999999998887762  023 5679999998 43321      1222344444      


Q ss_pred             chhhHHHHHHHHHHHhcc--CCCceEEEEeeceEEeCCCCc---ccchHHHHHHHhCCCCCCCCCccccccHHHHHHHHH
Q 017977          200 FNRGVLVCREWEGTALKV--NKDVRLALIRIGIVLGKDGGA---LAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY  274 (363)
Q Consensus       200 y~~~k~~~~~~~~~~~~~--~~~~~~~ilRp~~v~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~  274 (363)
                          |.............  ..+++++++||+.++++....   ...+..  ....+.+      ..++++++|+|++++
T Consensus       153 ----K~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~--~~~~~~~------~~~~~~~~dva~~~~  220 (244)
T 1cyd_A          153 ----KGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFAR--KLKERHP------LRKFAEVEDVVNSIL  220 (244)
T ss_dssp             ----HHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHH--HHHHHST------TSSCBCHHHHHHHHH
T ss_pred             ----HHHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccccCHHHHH--HHHhcCC------ccCCCCHHHHHHHHH
Confidence                43333322222111  138999999999999874221   011111  1122222      246899999999999


Q ss_pred             HHhcCCC--C-CceEEeeCCC
Q 017977          275 EALSNPS--Y-RGVINGTAPN  292 (363)
Q Consensus       275 ~~~~~~~--~-~g~~~i~~~~  292 (363)
                      .+++.+.  . +..+++.++.
T Consensus       221 ~l~~~~~~~~~G~~~~v~gG~  241 (244)
T 1cyd_A          221 FLLSDRSASTSGGGILVDAGY  241 (244)
T ss_dssp             HHHSGGGTTCCSSEEEESTTG
T ss_pred             HHhCchhhcccCCEEEECCCc
Confidence            9997643  2 3477877764

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.88  E-value=2.8e-23  Score=180.31  Aligned_cols=233  Identities=14%  Similarity=0.113  Sum_probs=150.6

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCC-CCccccCcccccCcchHHhhcc-------CCCE
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTA  119 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~d~  119 (363)
                      ..++++|||||+|+||++++++|+++|++|++++|+.......... ........+|+.|.+++.++++       ++|+
T Consensus         6 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   85 (259)
T 4e6p_A            6 LEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDI   85 (259)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            3457899999999999999999999999999999987654332111 1112245689999998887776       7999


Q ss_pred             EEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCC-CCCeEEEeccceecCCcccccccCCCcchhhh
Q 017977          120 VVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLELVKPKYLMRAAHQEMITWLSDYCAK  193 (363)
Q Consensus       120 Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~-~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~  193 (363)
                      |||+||.....   ..+.+..+..+++|+.++.++++++.+.  ..+ ..++|++||..+.++       .+....|..+
T Consensus        86 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------~~~~~~Y~as  158 (259)
T 4e6p_A           86 LVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRG-------EALVAIYCAT  158 (259)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC-------CTTBHHHHHH
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccC-------CCCChHHHHH
Confidence            99999975332   2355677889999999999999988652  012 457999999854332       2233455555


Q ss_pred             hhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHH-hCCC---CCCCCCccccccHHHH
Q 017977          194 VYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMF-AGGP---LGSGQQWFSWIHLDDI  269 (363)
Q Consensus       194 ~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~i~v~D~  269 (363)
                      |.+...+.++       ....+. ..|+++++++||.++++...........+... .+..   +........+.+++|+
T Consensus       159 K~a~~~~~~~-------la~e~~-~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dv  230 (259)
T 4e6p_A          159 KAAVISLTQS-------AGLDLI-KHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDL  230 (259)
T ss_dssp             HHHHHHHHHH-------HHHHHG-GGTEEEEEEEECCBCSTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTHHH
T ss_pred             HHHHHHHHHH-------HHHHhh-hcCCEEEEEEECCCccchhhhhhhhhhhhccCChHHHHHHHhccCCCCCCcCHHHH
Confidence            4332222211       111111 23899999999999988532211111111000 0000   0111233458999999


Q ss_pred             HHHHHHHhcCCC---CCceEEeeCCCCcC
Q 017977          270 VNLIYEALSNPS---YRGVINGTAPNPVR  295 (363)
Q Consensus       270 a~a~~~~~~~~~---~~g~~~i~~~~~~s  295 (363)
                      |++++.++....   .+.+|++.+|..+|
T Consensus       231 a~~v~~L~s~~~~~itG~~i~vdgG~~~s  259 (259)
T 4e6p_A          231 TGMAIFLASAESDYIVSQTYNVDGGNWMS  259 (259)
T ss_dssp             HHHHHHTTSGGGTTCCSCEEEESTTSSCC
T ss_pred             HHHHHHHhCCccCCCCCCEEEECcChhcC
Confidence            999999886543   34499999886543

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.88  E-value=1.7e-22  Score=168.72  Aligned_cols=192  Identities=13%  Similarity=0.048  Sum_probs=134.9

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccC---CCEEEEccC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQG---STAVVNLAG  125 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~---~d~Vi~~a~  125 (363)
                      ++|+|+||||+|+||++++++|+ +|++|++++|+..             ...+|+.|.+++.+++++   +|+|||+||
T Consensus         2 ~kM~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-------------~~~~D~~~~~~~~~~~~~~~~~d~vi~~ag   67 (202)
T 3d7l_A            2 NAMKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-------------DVTVDITNIDSIKKMYEQVGKVDAIVSATG   67 (202)
T ss_dssp             CSCEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-------------SEECCTTCHHHHHHHHHHHCCEEEEEECCC
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-------------ceeeecCCHHHHHHHHHHhCCCCEEEECCC
Confidence            34689999999999999999999 9999999999864             234799999988888765   899999999


Q ss_pred             CCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC-CCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhcccch
Q 017977          126 TPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVSFN  201 (363)
Q Consensus       126 ~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~~y~  201 (363)
                      .....   ..+.+.....+++|+.++.++++++.+. ..+ +++|++||..+ +.      ..+....|..         
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~-~~------~~~~~~~Y~~---------  130 (202)
T 3d7l_A           68 SATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDK-GSFTLTTGIMM-ED------PIVQGASAAM---------  130 (202)
T ss_dssp             CCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEE-EEEEEECCGGG-TS------CCTTCHHHHH---------
T ss_pred             CCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccC-CEEEEEcchhh-cC------CCCccHHHHH---------
Confidence            64322   2244556788899999999999999873 113 57999998732 21      1122233443         


Q ss_pred             hhHHHHHHHHHHHhcc-CCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHHHHHhcCC
Q 017977          202 RGVLVCREWEGTALKV-NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNP  280 (363)
Q Consensus       202 ~~k~~~~~~~~~~~~~-~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~  280 (363)
                       +|...+.+....... ..+++++++||+.++++...          ...      ....+.+++++|+|++++.++...
T Consensus       131 -sK~~~~~~~~~~~~e~~~gi~v~~v~pg~v~~~~~~----------~~~------~~~~~~~~~~~dva~~~~~~~~~~  193 (202)
T 3d7l_A          131 -ANGAVTAFAKSAAIEMPRGIRINTVSPNVLEESWDK----------LEP------FFEGFLPVPAAKVARAFEKSVFGA  193 (202)
T ss_dssp             -HHHHHHHHHHHHTTSCSTTCEEEEEEECCBGGGHHH----------HGG------GSTTCCCBCHHHHHHHHHHHHHSC
T ss_pred             -HHHHHHHHHHHHHHHccCCeEEEEEecCccCCchhh----------hhh------hccccCCCCHHHHHHHHHHhhhcc
Confidence             443333333322211 24899999999999987321          011      112356899999999999988554


Q ss_pred             CCCceEEe
Q 017977          281 SYRGVING  288 (363)
Q Consensus       281 ~~~g~~~i  288 (363)
                      ..+.+|++
T Consensus       194 ~~G~~~~v  201 (202)
T 3d7l_A          194 QTGESYQV  201 (202)
T ss_dssp             CCSCEEEE
T ss_pred             ccCceEec
Confidence            34447776

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.88  E-value=5.9e-23  Score=182.46  Aligned_cols=238  Identities=13%  Similarity=0.021  Sum_probs=156.7

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCC-----CCccccCcccccCcchHHhhcc-------C
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KKTRFFPGVMIAEEPQWRDCIQ-------G  116 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~-------~  116 (363)
                      .+++|+||||+|+||++++++|+++|++|++++|+..........     ........+|+.|.+++.++++       .
T Consensus        25 ~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~  104 (302)
T 1w6u_A           25 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGH  104 (302)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcCC
Confidence            447899999999999999999999999999999987553321110     1112245689999888877765       4


Q ss_pred             CCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC---CCCCCCeEEEeccceecCCcccccccCCCcch
Q 017977          117 STAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES---PEGVRPSVLELVKPKYLMRAAHQEMITWLSDY  190 (363)
Q Consensus       117 ~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~  190 (363)
                      +|+|||+||.....   ....+..+..+++|+.++.++++++.+.   ..+..++|++||..+..+       .++...|
T Consensus       105 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~-------~~~~~~Y  177 (302)
T 1w6u_A          105 PNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETG-------SGFVVPS  177 (302)
T ss_dssp             CSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHC-------CTTCHHH
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccC-------CCCcchh
Confidence            69999999964321   3455677889999999999998887642   134567999998843222       2233345


Q ss_pred             hhhhhhcccchhhHHHHHHHHHHHhc--cCCCceEEEEeeceEEeCCC-Ccc-cchHHHHHHHhCCCCCCCCCccccccH
Q 017977          191 CAKVYCLVSFNRGVLVCREWEGTALK--VNKDVRLALIRIGIVLGKDG-GAL-AKMIPLFMMFAGGPLGSGQQWFSWIHL  266 (363)
Q Consensus       191 ~~~~~~~~~y~~~k~~~~~~~~~~~~--~~~~~~~~ilRp~~v~g~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v  266 (363)
                      ..+|.          ....+......  ...|++++++||+.++++.. ... .............++      ..++++
T Consensus       178 ~~sK~----------a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~p~------~~~~~~  241 (302)
T 1w6u_A          178 ASAKA----------GVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPC------GRLGTV  241 (302)
T ss_dssp             HHHHH----------HHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTT------SSCBCH
T ss_pred             HHHHH----------HHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhcCCc------CCCCCH
Confidence            55432          22222221111  12489999999999998732 111 111111122222222      247899


Q ss_pred             HHHHHHHHHHhcCCC---CCceEEeeCCCCcCHHHHHHHHHHHhCC
Q 017977          267 DDIVNLIYEALSNPS---YRGVINGTAPNPVRLAEMCDHLGNVLGR  309 (363)
Q Consensus       267 ~D~a~a~~~~~~~~~---~~g~~~i~~~~~~s~~el~~~i~~~~g~  309 (363)
                      +|+|++++.++....   .+..|++.++..+++.++++.+.+..|+
T Consensus       242 ~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~~~~~~~~~~g~  287 (302)
T 1w6u_A          242 EELANLAAFLCSDYASWINGAVIKFDGGEEVLISGEFNDLRKVTKE  287 (302)
T ss_dssp             HHHHHHHHHHTSGGGTTCCSCEEEESTTHHHHHHSTTGGGGGCCHH
T ss_pred             HHHHHHHHHHcCCcccccCCCEEEECCCeeeccCCccccchhhccc
Confidence            999999999987543   2348999998888888888888777653

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.88  E-value=3.5e-21  Score=166.95  Aligned_cols=217  Identities=14%  Similarity=0.026  Sum_probs=146.7

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc-------CCCEE
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAV  120 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~V  120 (363)
                      ..+++||||||+|+||+++++.|+++|++|++++|+..+....     ......+|+.|.+++.++++       ++|+|
T Consensus        26 ~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~-----~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  100 (260)
T 3un1_A           26 NQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSADP-----DIHTVAGDISKPETADRIVREGIERFGRIDSL  100 (260)
T ss_dssp             TTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCSST-----TEEEEESCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccC-----ceEEEEccCCCHHHHHHHHHHHHHHCCCCCEE
Confidence            3456899999999999999999999999999999987654332     12245689999998887775       79999


Q ss_pred             EEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhhhh
Q 017977          121 VNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVY  195 (363)
Q Consensus       121 i~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~  195 (363)
                      ||+||.....   ..+.+..+..+++|+.++.++++++.+.  ..+..++|++||. ..+.    ....++...|..+|.
T Consensus       101 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~-~~~~----~~~~~~~~~Y~~sKa  175 (260)
T 3un1_A          101 VNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTS-LVDQ----PMVGMPSALASLTKG  175 (260)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCT-TTTS----CBTTCCCHHHHHHHH
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEech-hhcc----CCCCCccHHHHHHHH
Confidence            9999975432   2356677889999999999999887421  1466789999997 3221    001112234444432


Q ss_pred             hcccchhhHHHHHHHHHHH-hc-cCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHH
Q 017977          196 CLVSFNRGVLVCREWEGTA-LK-VNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLI  273 (363)
Q Consensus       196 ~~~~y~~~k~~~~~~~~~~-~~-~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~  273 (363)
                      +.          ..+.... .+ ...|+++++++||.+.++....  ....  ......+      ...+.+++|+|+++
T Consensus       176 a~----------~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~--~~~~--~~~~~~p------~~r~~~~~dva~av  235 (260)
T 3un1_A          176 GL----------NAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPA--ETHS--TLAGLHP------VGRMGEIRDVVDAV  235 (260)
T ss_dssp             HH----------HHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCG--GGHH--HHHTTST------TSSCBCHHHHHHHH
T ss_pred             HH----------HHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCH--HHHH--HHhccCC------CCCCcCHHHHHHHH
Confidence            22          2221111 11 1238999999999999985432  1111  1112222      23478899999999


Q ss_pred             HHHhcCCCCCc-eEEeeCCCCc
Q 017977          274 YEALSNPSYRG-VINGTAPNPV  294 (363)
Q Consensus       274 ~~~~~~~~~~g-~~~i~~~~~~  294 (363)
                      +.+.+.....| ++++.+|...
T Consensus       236 ~~L~~~~~itG~~i~vdGG~~~  257 (260)
T 3un1_A          236 LYLEHAGFITGEILHVDGGQNA  257 (260)
T ss_dssp             HHHHHCTTCCSCEEEESTTGGG
T ss_pred             HHhcccCCCCCcEEEECCCeec
Confidence            99865544445 8999887543

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.88  E-value=2.5e-21  Score=169.01  Aligned_cols=220  Identities=16%  Similarity=0.056  Sum_probs=148.6

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCC-CCccccCcccccCcchHHhhcc-------CCCE
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTA  119 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~d~  119 (363)
                      ..+++++||||+|+||++++++|+++|++|++++|+.......... ........+|+.|.+++.++++       ++|+
T Consensus         9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   88 (271)
T 3tzq_B            9 LENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDI   88 (271)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            3457899999999999999999999999999999998765432211 1112245689999988887776       7899


Q ss_pred             EEEccCCCCC-----CCCChhhHHHHHHHHHHHHHHHHHHH----HhCCCCCCCeEEEeccceecCCcccccccCCCcch
Q 017977          120 VVNLAGTPIG-----TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDY  190 (363)
Q Consensus       120 Vi~~a~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~  190 (363)
                      +||+||....     ...+.+..+..+++|+.++.++++++    .+  .+..++|++||..+..+       .+....|
T Consensus        89 lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~~~g~iv~isS~~~~~~-------~~~~~~Y  159 (271)
T 3tzq_B           89 VDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLIS--AGGGAIVNISSATAHAA-------YDMSTAY  159 (271)
T ss_dssp             EEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--TTCEEEEEECCGGGTSB-------CSSCHHH
T ss_pred             EEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--cCCCEEEEECCHHHcCC-------CCCChHH
Confidence            9999997422     13356677889999999999999998    44  56678999999843222       2333456


Q ss_pred             hhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHH-HhCCCCCCCCCccccccHHHH
Q 017977          191 CAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMM-FAGGPLGSGQQWFSWIHLDDI  269 (363)
Q Consensus       191 ~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~D~  269 (363)
                      ..+|.+...+.++       ....+. ..|+++++++||.++++...... ....... ....+.      ..+..++|+
T Consensus       160 ~asKaa~~~l~~~-------la~e~~-~~gi~vn~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~~------~r~~~p~dv  224 (271)
T 3tzq_B          160 ACTKAAIETLTRY-------VATQYG-RHGVRCNAIAPGLVRTPRLEVGL-PQPIVDIFATHHLA------GRIGEPHEI  224 (271)
T ss_dssp             HHHHHHHHHHHHH-------HHHHHG-GGTEEEEEEEECCBCCTTTC----CHHHHHHHHTTSTT------SSCBCHHHH
T ss_pred             HHHHHHHHHHHHH-------HHHHHh-hcCEEEEEEEeCCCcCccccccC-CHHHHHHHHhcCCC------CCCcCHHHH
Confidence            6654333322211       111111 13899999999999998543110 0111111 222222      236789999


Q ss_pred             HHHHHHHhcCCC--CCc-eEEeeCC
Q 017977          270 VNLIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       270 a~a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      |++++.++....  ..| ++++.+|
T Consensus       225 A~~v~~L~s~~~~~itG~~i~vdGG  249 (271)
T 3tzq_B          225 AELVCFLASDRAAFITGQVIAADSG  249 (271)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHhCcccCCcCCCEEEECCC
Confidence            999999997543  344 8888877

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.87  E-value=6.5e-22  Score=172.25  Aligned_cols=225  Identities=15%  Similarity=0.026  Sum_probs=142.9

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCC----C-------CccccCcccccCcchHHhhccC-
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG----K-------KTRFFPGVMIAEEPQWRDCIQG-  116 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~-------~~~~~~~~d~~~~~~~~~~~~~-  116 (363)
                      .+++|+||||+|+||++++++|+++|++|++++|+..........    .       .......+|+.|.+++.+++++ 
T Consensus         6 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   85 (264)
T 2pd6_A            6 RSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQV   85 (264)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHHH
Confidence            346899999999999999999999999999999987654322111    0       1122445799998888777654 


Q ss_pred             ------C-CEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCC-CCCeEEEeccceecCCcccccc
Q 017977          117 ------S-TAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLELVKPKYLMRAAHQEM  183 (363)
Q Consensus       117 ------~-d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~-~~~~v~~SS~~~~yg~~~~~e~  183 (363)
                            + |+|||+||.....   ..+.+..+..+++|+.++.++++++.+.  ..+ ..++|++||..+.++       
T Consensus        86 ~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~-------  158 (264)
T 2pd6_A           86 QACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVG-------  158 (264)
T ss_dssp             HHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHC-------
T ss_pred             HHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccC-------
Confidence                  4 9999999975332   2356677889999999999999998763  113 457999999854333       


Q ss_pred             cCCCcchhhhhhhcccchhhHHHHHHHHHHHhc--cCCCceEEEEeeceEEeCCCCcccchHHHH-H-HHhCCCCCCCCC
Q 017977          184 ITWLSDYCAKVYCLVSFNRGVLVCREWEGTALK--VNKDVRLALIRIGIVLGKDGGALAKMIPLF-M-MFAGGPLGSGQQ  259 (363)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~--~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~-~~~~~~~~~~~~  259 (363)
                      .+....|..+          |.....+......  ...|++++++||+.++++.....   .+.+ . .....+      
T Consensus       159 ~~~~~~Y~~s----------K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~~------  219 (264)
T 2pd6_A          159 NVGQTNYAAS----------KAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKV---PQKVVDKITEMIP------  219 (264)
T ss_dssp             CTTBHHHHHH----------HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC-------------CTGGGCT------
T ss_pred             CCCChhhHHH----------HHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhc---CHHHHHHHHHhCC------
Confidence            2223344444          3322222221111  12389999999999999854321   1111 0 011111      


Q ss_pred             ccccccHHHHHHHHHHHhcCCC--C-CceEEeeCCCCcCHHHH
Q 017977          260 WFSWIHLDDIVNLIYEALSNPS--Y-RGVINGTAPNPVRLAEM  299 (363)
Q Consensus       260 ~~~~i~v~D~a~a~~~~~~~~~--~-~g~~~i~~~~~~s~~el  299 (363)
                      ...+++++|+|++++.++....  . +..+++.++..++....
T Consensus       220 ~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~~  262 (264)
T 2pd6_A          220 MGHLGDPEDVADVVAFLASEDSGYITGTSVEVTGGLFMAENLY  262 (264)
T ss_dssp             TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC-------
T ss_pred             CCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCceeccccC
Confidence            1247899999999999987532  3 34888888876655443

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.87  E-value=7.6e-23  Score=171.53  Aligned_cols=198  Identities=15%  Similarity=0.114  Sum_probs=136.4

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc---CCCEEEEccCCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ---GSTAVVNLAGTP  127 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~~d~Vi~~a~~~  127 (363)
                      |+|+||||+|+||++++++|+++  +|++++|++.+.......... ....+|+.|.+++.++++   ++|+|||+||..
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~~   77 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGA-RALPADLADELEAKALLEEAGPLDLLVHAVGKA   77 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTC-EECCCCTTSHHHHHHHHHHHCSEEEEEECCCCC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccC-cEEEeeCCCHHHHHHHHHhcCCCCEEEECCCcC
Confidence            58999999999999999999998  999999987554332111000 256689999999998887   899999999975


Q ss_pred             CCC---CCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhcccchhhH
Q 017977          128 IGT---RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRGV  204 (363)
Q Consensus       128 ~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~~y~~~k  204 (363)
                      ...   ..+.+..+..+++|+.++.++++++.+  .+.+++|++||. ..|.      ..++...|..+          |
T Consensus        78 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~iv~~sS~-~~~~------~~~~~~~Y~~s----------K  138 (207)
T 2yut_A           78 GRASVREAGRDLVEEMLAAHLLTAAFVLKHARF--QKGARAVFFGAY-PRYV------QVPGFAAYAAA----------K  138 (207)
T ss_dssp             CCBCSCC---CHHHHHHHHHHHHHHHHHHHCCE--EEEEEEEEECCC-HHHH------SSTTBHHHHHH----------H
T ss_pred             CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHh--cCCcEEEEEcCh-hhcc------CCCCcchHHHH----------H
Confidence            332   224556788999999999999999966  567789999998 3332      11223345444          3


Q ss_pred             HHHHHHHHHHhc--cCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHHHHHhcCCCC
Q 017977          205 LVCREWEGTALK--VNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSY  282 (363)
Q Consensus       205 ~~~~~~~~~~~~--~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~  282 (363)
                      ............  ...|++++++||+.++++...           ..      +.....+++++|+|++++.+++++..
T Consensus       139 ~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~~-----------~~------~~~~~~~~~~~dva~~~~~~~~~~~~  201 (207)
T 2yut_A          139 GALEAYLEAARKELLREGVHLVLVRLPAVATGLWA-----------PL------GGPPKGALSPEEAARKVLEGLFREPV  201 (207)
T ss_dssp             HHHHHHHHHHHHHHHTTTCEEEEECCCCBCSGGGG-----------GG------TSCCTTCBCHHHHHHHHHHHHC--CC
T ss_pred             HHHHHHHHHHHHHHhhhCCEEEEEecCcccCCCcc-----------cc------CCCCCCCCCHHHHHHHHHHHHhCCCC
Confidence            222222221111  124899999999999887410           01      12235789999999999999987765


Q ss_pred             CceEE
Q 017977          283 RGVIN  287 (363)
Q Consensus       283 ~g~~~  287 (363)
                      ..+++
T Consensus       202 ~~~~~  206 (207)
T 2yut_A          202 PALLE  206 (207)
T ss_dssp             CSCCC
T ss_pred             ccccc
Confidence            44443

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.87  E-value=6.8e-22  Score=171.99  Aligned_cols=226  Identities=13%  Similarity=0.103  Sum_probs=146.9

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCC-----CCccccCcccccCcchHHhhcc-------C
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KKTRFFPGVMIAEEPQWRDCIQ-------G  116 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~-------~  116 (363)
                      .+++|+||||+|+||++++++|+++|++|++++|+..+.......     ........+|+.|.+++.++++       +
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   85 (263)
T 3ai3_A            6 SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFGG   85 (263)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            347899999999999999999999999999999987543322110     1112244689999988887775       7


Q ss_pred             CCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchh
Q 017977          117 STAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYC  191 (363)
Q Consensus       117 ~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~  191 (363)
                      +|+|||+||.....   ....+..+..+++|+.++.++++++.+.  ..+..++|++||.++ +.      ..+....|.
T Consensus        86 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~-~~------~~~~~~~Y~  158 (263)
T 3ai3_A           86 ADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICA-VQ------PLWYEPIYN  158 (263)
T ss_dssp             CSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG-TS------CCTTCHHHH
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhh-cC------CCCCcchHH
Confidence            89999999974332   2355667889999999999988887532  135678999999843 32      112334555


Q ss_pred             hhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc-cc--------hHHHHH-HHhC-CCCCCCCCc
Q 017977          192 AKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL-AK--------MIPLFM-MFAG-GPLGSGQQW  260 (363)
Q Consensus       192 ~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~-~~--------~~~~~~-~~~~-~~~~~~~~~  260 (363)
                      .+|.+...+.++      +.. .+. ..|++++++||+.++++..... ..        ...... .... .++      
T Consensus       159 ~sK~a~~~~~~~------la~-e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~------  224 (263)
T 3ai3_A          159 VTKAALMMFSKT------LAT-EVI-KDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPI------  224 (263)
T ss_dssp             HHHHHHHHHHHH------HHH-HHG-GGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHHCTT------
T ss_pred             HHHHHHHHHHHH------HHH-Hhh-hcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcCCCC------
Confidence            554332222211      111 111 2389999999999998742110 00        000111 1111 222      


Q ss_pred             cccccHHHHHHHHHHHhcCCC--CCc-eEEeeCCCCcC
Q 017977          261 FSWIHLDDIVNLIYEALSNPS--YRG-VINGTAPNPVR  295 (363)
Q Consensus       261 ~~~i~v~D~a~a~~~~~~~~~--~~g-~~~i~~~~~~s  295 (363)
                      ..+++++|+|++++.++..+.  ..| .|++.+|...+
T Consensus       225 ~~~~~~~dvA~~~~~l~s~~~~~~~G~~~~vdgG~~~s  262 (263)
T 3ai3_A          225 KRFASPEELANFFVFLCSERATYSVGSAYFVDGGMLKT  262 (263)
T ss_dssp             CSCBCHHHHHHHHHHHTSTTCTTCCSCEEEESTTCCCC
T ss_pred             CCCcCHHHHHHHHHHHcCccccCCCCcEEEECCCcccc
Confidence            347899999999999997643  334 89998886554

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.87  E-value=3.6e-21  Score=166.19  Aligned_cols=220  Identities=14%  Similarity=0.027  Sum_probs=143.3

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccC-----CCCCccccCcccccCcchHHhhcc-------CC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF-----PGKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (363)
                      +++|+||||+|+||++++++|+++|++|++++|+..+.....     ..........+|+.|.+++.++++       ++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAI   81 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            368999999999999999999999999999999875433211     111112244679999988887775       78


Q ss_pred             CEEEEccCCCCCCC------CChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcc
Q 017977          118 TAVVNLAGTPIGTR------WSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSD  189 (363)
Q Consensus       118 d~Vi~~a~~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~  189 (363)
                      |+|||+||......      ...+..+..+++|+.++.++++++.+.  ..+.+++|++||.++.++       .+....
T Consensus        82 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-------~~~~~~  154 (250)
T 2cfc_A           82 DVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVA-------FPGRSA  154 (250)
T ss_dssp             CEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-------CTTCHH
T ss_pred             CEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccC-------CCCchh
Confidence            99999999743221      245667889999999997776666431  135678999999843222       122334


Q ss_pred             hhhhhhhcccchhhHHHHHHHHHHHhc--cCCCceEEEEeeceEEeCCCCcccchHHHH-HHHhCCCCCCCCCccccccH
Q 017977          190 YCAKVYCLVSFNRGVLVCREWEGTALK--VNKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHL  266 (363)
Q Consensus       190 ~~~~~~~~~~y~~~k~~~~~~~~~~~~--~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v  266 (363)
                      |..+|.          ....+......  ...|++++++||+.++++............ ......++      ..+.++
T Consensus       155 Y~~sK~----------a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~------~~~~~~  218 (250)
T 2cfc_A          155 YTTSKG----------AVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARIPQ------KEIGTA  218 (250)
T ss_dssp             HHHHHH----------HHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTSHHHHHHHHTTCTT------CSCBCH
T ss_pred             HHHHHH----------HHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCCHHHHHHHHhcCCC------CCCcCH
Confidence            554432          22222211111  123899999999999998643200000111 11222222      247899


Q ss_pred             HHHHHHHHHHhcCCC--CCc-eEEeeCCC
Q 017977          267 DDIVNLIYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       267 ~D~a~a~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      +|+|++++.++..+.  ..| .+++.+|.
T Consensus       219 ~dva~~~~~l~~~~~~~~~G~~~~v~gG~  247 (250)
T 2cfc_A          219 AQVADAVMFLAGEDATYVNGAALVMDGAY  247 (250)
T ss_dssp             HHHHHHHHHHHSTTCTTCCSCEEEESTTG
T ss_pred             HHHHHHHHHHcCchhhcccCCEEEECCce
Confidence            999999999997653  334 78877763

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.87  E-value=1.2e-21  Score=168.46  Aligned_cols=219  Identities=19%  Similarity=0.132  Sum_probs=144.8

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc---CCCEEEEccC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ---GSTAVVNLAG  125 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~~d~Vi~~a~  125 (363)
                      .+++|+||||+|+||++++++|+++|++|++++|+..+.+.+...........+|+.|.+++.++++   ++|+|||+||
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~Ag   85 (244)
T 3d3w_A            6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNAA   85 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEECCC
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHHHcCCCCEEEECCc
Confidence            3468999999999999999999999999999999875543321110011134679999999988876   5899999999


Q ss_pred             CCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCC-CCCeEEEeccceecCCcccccccCCCcchhhhhhhccc
Q 017977          126 TPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVS  199 (363)
Q Consensus       126 ~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~-~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~~  199 (363)
                      .....   ....+..+..+++|+.++.++++++.+.  ..+ .+++|++||..+ +.      ..+....|..+      
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~-~~------~~~~~~~Y~~s------  152 (244)
T 3d3w_A           86 VALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCS-QR------AVTNHSVYCST------  152 (244)
T ss_dssp             CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGG-TS------CCTTBHHHHHH------
T ss_pred             cCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhh-cc------CCCCCchHHHH------
Confidence            74332   2345667889999999999888888752  023 567999999832 22      11222344444      


Q ss_pred             chhhHHHHHHHHHHHhcc--CCCceEEEEeeceEEeCCCCc---ccchHHHHHHHhCCCCCCCCCccccccHHHHHHHHH
Q 017977          200 FNRGVLVCREWEGTALKV--NKDVRLALIRIGIVLGKDGGA---LAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY  274 (363)
Q Consensus       200 y~~~k~~~~~~~~~~~~~--~~~~~~~ilRp~~v~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~  274 (363)
                          |.............  ..+++++++||+.++++....   .......  .....+      ...+++++|+|++++
T Consensus       153 ----K~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~--~~~~~~------~~~~~~~~dva~~~~  220 (244)
T 3d3w_A          153 ----KGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKT--MLNRIP------LGKFAEVEHVVNAIL  220 (244)
T ss_dssp             ----HHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCSTTHHHH--HHHTCT------TCSCBCHHHHHHHHH
T ss_pred             ----HHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccChHHHHH--HHhhCC------CCCCcCHHHHHHHHH
Confidence                43333322221111  238999999999999874321   0111111  122222      235899999999999


Q ss_pred             HHhcCCC--CCc-eEEeeCCC
Q 017977          275 EALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       275 ~~~~~~~--~~g-~~~i~~~~  292 (363)
                      .+++...  ..| .|++.++.
T Consensus       221 ~l~~~~~~~~~G~~~~v~gG~  241 (244)
T 3d3w_A          221 FLLSDRSGMTTGSTLPVEGGF  241 (244)
T ss_dssp             HHHSGGGTTCCSCEEEESTTG
T ss_pred             HHcCccccCCCCCEEEECCCc
Confidence            9997542  334 88888774

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.87  E-value=1.6e-21  Score=167.93  Aligned_cols=221  Identities=16%  Similarity=0.155  Sum_probs=147.0

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCc-ccc----cCCCCCccccCcccccCcchHHhhcc-------C
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK-AEL----IFPGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~----~~~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (363)
                      ++++++||||+|+||++++++|+++|++|++++|+... .+.    +...........+|+.|.+++.++++       +
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   82 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGS   82 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            34689999999999999999999999999999886532 211    11111122245689999988887775       7


Q ss_pred             CCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchh
Q 017977          117 STAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYC  191 (363)
Q Consensus       117 ~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~  191 (363)
                      +|+|||+||.....   ..+.+..+..+++|+.++.++++++.+.  ..+..++|++||..+.++       .+....|.
T Consensus        83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------~~~~~~Y~  155 (246)
T 3osu_A           83 LDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVG-------NPGQANYV  155 (246)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC-------CTTCHHHH
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCC-------CCCChHHH
Confidence            89999999975432   3356677889999999999999998321  145668999999854433       23334565


Q ss_pred             hhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCccc-chHHHHHHHhCCCCCCCCCccccccHHHHH
Q 017977          192 AKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALA-KMIPLFMMFAGGPLGSGQQWFSWIHLDDIV  270 (363)
Q Consensus       192 ~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  270 (363)
                      .+|.+...+.+      . ....+. ..|+++.+++||.+.++...... ....  ......++      ..+.+++|+|
T Consensus       156 ~sK~a~~~~~~------~-la~e~~-~~gi~vn~v~PG~v~t~~~~~~~~~~~~--~~~~~~p~------~r~~~~~dva  219 (246)
T 3osu_A          156 ATKAGVIGLTK------S-AARELA-SRGITVNAVAPGFIVSDMTDALSDELKE--QMLTQIPL------ARFGQDTDIA  219 (246)
T ss_dssp             HHHHHHHHHHH------H-HHHHHG-GGTEEEEEEEECSBGGGCCSCSCHHHHH--HHHTTCTT------CSCBCHHHHH
T ss_pred             HHHHHHHHHHH------H-HHHHhc-ccCeEEEEEEECCCcCCcccccCHHHHH--HHHhcCCC------CCCcCHHHHH
Confidence            55433222221      1 111111 23899999999999987543221 1111  22233332      2478899999


Q ss_pred             HHHHHHhcCCC--C-CceEEeeCCC
Q 017977          271 NLIYEALSNPS--Y-RGVINGTAPN  292 (363)
Q Consensus       271 ~a~~~~~~~~~--~-~g~~~i~~~~  292 (363)
                      ++++.++....  . +.++++.+|.
T Consensus       220 ~~v~~l~s~~~~~itG~~i~vdgG~  244 (246)
T 3osu_A          220 NTVAFLASDKAKYITGQTIHVNGGM  244 (246)
T ss_dssp             HHHHHHTSGGGTTCCSCEEEESTTS
T ss_pred             HHHHHHhCccccCCCCCEEEeCCCc
Confidence            99999987543  2 4488888774

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.87  E-value=6.1e-21  Score=165.36  Aligned_cols=224  Identities=16%  Similarity=0.071  Sum_probs=144.4

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCC-CccccCcccccCcchHHhhcc-------CCCEE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK-KTRFFPGVMIAEEPQWRDCIQ-------GSTAV  120 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~-------~~d~V  120 (363)
                      .+++++||||+|+||++++++|+++|++|++++|+....+...... ....+..+|+.|.+++.++++       ++|++
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   85 (257)
T 3tpc_A            6 KSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVHGL   85 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4468999999999999999999999999999999987655443321 122345689999988887775       78999


Q ss_pred             EEccCCCCCC-------CCChhhHHHHHHHHHHHHHHHHHHHHhC-CC-------CCCCeEEEeccceecCCcccccccC
Q 017977          121 VNLAGTPIGT-------RWSSEIKKEIKESRIRVTSKVVDLINES-PE-------GVRPSVLELVKPKYLMRAAHQEMIT  185 (363)
Q Consensus       121 i~~a~~~~~~-------~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-------~~~~~v~~SS~~~~yg~~~~~e~~~  185 (363)
                      ||+||.....       ....+..+..+++|+.++.++++++.+. ..       +..++|++||..+.++       .+
T Consensus        86 v~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~-------~~  158 (257)
T 3tpc_A           86 VNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDG-------QI  158 (257)
T ss_dssp             EECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHC-------CT
T ss_pred             EECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccC-------CC
Confidence            9999975332       2345677889999999999999998864 11       3456999999854332       23


Q ss_pred             CCcchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHH-H-HHhCCCCCCCCCcccc
Q 017977          186 WLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF-M-MFAGGPLGSGQQWFSW  263 (363)
Q Consensus       186 ~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~  263 (363)
                      ....|..+|.+...+.++       ....+. ..|+++++++||.+.++.....   .... . .....++     ...+
T Consensus       159 ~~~~Y~asKaa~~~~~~~-------la~e~~-~~gi~vn~v~PG~v~t~~~~~~---~~~~~~~~~~~~p~-----~~r~  222 (257)
T 3tpc_A          159 GQAAYAASKGGVAALTLP-------AARELA-RFGIRVVTIAPGIFDTPMMAGM---PQDVQDALAASVPF-----PPRL  222 (257)
T ss_dssp             TCHHHHHHHHHHHHHHHH-------HHHHHG-GGTEEEEEEEECCBSCC-----------------CCSSS-----SCSC
T ss_pred             CCcchHHHHHHHHHHHHH-------HHHHHH-HcCeEEEEEEeCCCCChhhccC---CHHHHHHHHhcCCC-----CCCC
Confidence            334565554332222211       111111 2389999999999988753221   1111 1 1111111     0347


Q ss_pred             ccHHHHHHHHHHHhcCCCCCc-eEEeeCCCCcC
Q 017977          264 IHLDDIVNLIYEALSNPSYRG-VINGTAPNPVR  295 (363)
Q Consensus       264 i~v~D~a~a~~~~~~~~~~~g-~~~i~~~~~~s  295 (363)
                      .+++|+|+++..+++.....| .+++.+|..++
T Consensus       223 ~~~~dva~~v~~l~s~~~itG~~i~vdGG~~~~  255 (257)
T 3tpc_A          223 GRAEEYAALVKHICENTMLNGEVIRLDGALRMA  255 (257)
T ss_dssp             BCHHHHHHHHHHHHHCTTCCSCEEEESTTCCC-
T ss_pred             CCHHHHHHHHHHHcccCCcCCcEEEECCCccCC
Confidence            899999999999998755555 88888876543

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.87  E-value=2.4e-21  Score=167.93  Aligned_cols=222  Identities=15%  Similarity=0.018  Sum_probs=142.4

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc-------CCCEE
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAV  120 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~V  120 (363)
                      ..+++||||||+|+||+++++.|+++|++|++++|+..+......... .....+|+.|.+++.++++       ++|+|
T Consensus        25 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l  103 (260)
T 3gem_A           25 LSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAG-AVALYGDFSCETGIMAFIDLLKTQTSSLRAV  103 (260)
T ss_dssp             --CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHT-CEEEECCTTSHHHHHHHHHHHHHHCSCCSEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcC-CeEEECCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            345689999999999999999999999999999999865322111111 1245689999988877664       68999


Q ss_pred             EEccCCCCCCC--CChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhhhhh
Q 017977          121 VNLAGTPIGTR--WSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYC  196 (363)
Q Consensus       121 i~~a~~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~  196 (363)
                      ||+||......  ...+..+..+++|+.++.++++++.+.  ..+..++|++||..+.++       .+....|..+|.+
T Consensus       104 v~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~-------~~~~~~Y~asKaa  176 (260)
T 3gem_A          104 VHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKG-------SSKHIAYCATKAG  176 (260)
T ss_dssp             EECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTC-------CSSCHHHHHHHHH
T ss_pred             EECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCC-------CCCcHhHHHHHHH
Confidence            99999753322  233455678999999999998888653  245568999999854332       2333456555433


Q ss_pred             cccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHHHHH
Q 017977          197 LVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEA  276 (363)
Q Consensus       197 ~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~  276 (363)
                      ...+.+         ....+...++++.+++||.+.++.... .....  ......++      ..+..++|+|++++.+
T Consensus       177 ~~~l~~---------~la~e~~~~Irvn~v~PG~v~t~~~~~-~~~~~--~~~~~~p~------~r~~~~edva~~v~~L  238 (260)
T 3gem_A          177 LESLTL---------SFAARFAPLVKVNGIAPALLMFQPKDD-AAYRA--NALAKSAL------GIEPGAEVIYQSLRYL  238 (260)
T ss_dssp             HHHHHH---------HHHHHHTTTCEEEEEEECTTCC------------------CCS------CCCCCTHHHHHHHHHH
T ss_pred             HHHHHH---------HHHHHHCCCCEEEEEeecccccCCCCC-HHHHH--HHHhcCCC------CCCCCHHHHHHHHHHH
Confidence            222221         111111226999999999998764221 01111  11111121      2356789999999999


Q ss_pred             hcCCCCCc-eEEeeCCCCcC
Q 017977          277 LSNPSYRG-VINGTAPNPVR  295 (363)
Q Consensus       277 ~~~~~~~g-~~~i~~~~~~s  295 (363)
                      ++.....| ++++.+|..++
T Consensus       239 ~~~~~itG~~i~vdGG~~~~  258 (260)
T 3gem_A          239 LDSTYVTGTTLTVNGGRHVK  258 (260)
T ss_dssp             HHCSSCCSCEEEESTTTTTC
T ss_pred             hhCCCCCCCEEEECCCcccC
Confidence            96555455 89998886554

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.86  E-value=3.8e-21  Score=167.03  Aligned_cols=219  Identities=11%  Similarity=0.047  Sum_probs=144.5

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccC----CCCCccccCcccccCcchHHhhcc-------CC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (363)
                      .+++|+||||+|+||++++++|+++|++|++++|+........    ..........+|+.|.+++.++++       ++
T Consensus        12 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   91 (260)
T 3awd_A           12 DNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRV   91 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            3468999999999999999999999999999999875432211    111112245689999988887765       68


Q ss_pred             CEEEEccCCCC-C---CCCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCC--cc
Q 017977          118 TAVVNLAGTPI-G---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWL--SD  189 (363)
Q Consensus       118 d~Vi~~a~~~~-~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~--~~  189 (363)
                      |+|||+||... .   .....+..+..+++|+.++.++++++.+.  ..+..++|++||..+..+       .+..  ..
T Consensus        92 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-------~~~~~~~~  164 (260)
T 3awd_A           92 DILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIV-------NRPQQQAA  164 (260)
T ss_dssp             CEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-------CSSSCCHH
T ss_pred             CEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhccc-------CCCCCccc
Confidence            99999999643 2   12345566788999999999999888642  135667999998843221       1111  34


Q ss_pred             hhhhhhhcccchhhHHHHHHHHHHHhcc--CCCceEEEEeeceEEeCCCC-cc--cchHHHHHHHhCCCCCCCCCccccc
Q 017977          190 YCAKVYCLVSFNRGVLVCREWEGTALKV--NKDVRLALIRIGIVLGKDGG-AL--AKMIPLFMMFAGGPLGSGQQWFSWI  264 (363)
Q Consensus       190 ~~~~~~~~~~y~~~k~~~~~~~~~~~~~--~~~~~~~ilRp~~v~g~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~i  264 (363)
                      |..+          |.............  ..|++++++||+.++++... ..  ..+..  ....+.++      ..++
T Consensus       165 Y~~s----------K~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~--~~~~~~~~------~~~~  226 (260)
T 3awd_A          165 YNAS----------KAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKPELYD--AWIAGTPM------GRVG  226 (260)
T ss_dssp             HHHH----------HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTCHHHHH--HHHHTCTT------SSCB
T ss_pred             cHHH----------HHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCChHHHH--HHHhcCCc------CCCC
Confidence            5444          32222222211111  23899999999999998643 11  11111  12223232      2478


Q ss_pred             cHHHHHHHHHHHhcCCC--CCc-eEEeeCCC
Q 017977          265 HLDDIVNLIYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       265 ~v~D~a~a~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      +++|+|++++.++....  ..| .|++.++.
T Consensus       227 ~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~  257 (260)
T 3awd_A          227 QPDEVASVVQFLASDAASLMTGAIVNVDAGF  257 (260)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             CHHHHHHHHHHHhCchhccCCCcEEEECCce
Confidence            99999999999987532  344 88888864

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.86  E-value=9.8e-22  Score=170.17  Aligned_cols=227  Identities=15%  Similarity=0.053  Sum_probs=150.2

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccC----CCCCccccCcccccCcchHHhhcc-------C
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (363)
                      ..+++++||||+|+||++++++|+++|++|++++|+....+...    ..........+|+.|.+++.++++       +
T Consensus        10 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   89 (256)
T 3gaf_A           10 LNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGK   89 (256)
T ss_dssp             CTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            34579999999999999999999999999999999876543321    111122245689999988877765       7


Q ss_pred             CCEEEEccCCCCCC--CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhh
Q 017977          117 STAVVNLAGTPIGT--RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCA  192 (363)
Q Consensus       117 ~d~Vi~~a~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~  192 (363)
                      +|++||+||.....  ..+.+..+..+++|+.++.++++++.+.  ..+..++|++||..+..+       .+....|..
T Consensus        90 id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-------~~~~~~Y~a  162 (256)
T 3gaf_A           90 ITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENT-------NVRMASYGS  162 (256)
T ss_dssp             CCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCC-------CTTCHHHHH
T ss_pred             CCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCC-------CCCchHHHH
Confidence            89999999975432  3455677889999999999999987532  145568999999844222       233345665


Q ss_pred             hhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHH-HHHhCCCCCCCCCccccccHHHHHH
Q 017977          193 KVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVN  271 (363)
Q Consensus       193 ~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~  271 (363)
                      +|.+...+.++       ....+. ..|+++..++||.+.++....... -... ......++      ..+.+++|+|+
T Consensus       163 sKaa~~~~~~~-------la~e~~-~~gi~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~p~------~r~~~~~dva~  227 (256)
T 3gaf_A          163 SKAAVNHLTRN-------IAFDVG-PMGIRVNAIAPGAIKTDALATVLT-PEIERAMLKHTPL------GRLGEAQDIAN  227 (256)
T ss_dssp             HHHHHHHHHHH-------HHHHHG-GGTEEEEEEEECCBCCHHHHHHCC-HHHHHHHHTTCTT------SSCBCHHHHHH
T ss_pred             HHHHHHHHHHH-------HHHHHh-hhCcEEEEEEEccccCchhhhccC-HHHHHHHHhcCCC------CCCCCHHHHHH
Confidence            54333322221       111111 238999999999998763211000 0011 12222222      34789999999


Q ss_pred             HHHHHhcCCC---CCceEEeeCCCCcCH
Q 017977          272 LIYEALSNPS---YRGVINGTAPNPVRL  296 (363)
Q Consensus       272 a~~~~~~~~~---~~g~~~i~~~~~~s~  296 (363)
                      +++.++....   .+.++++.+|...++
T Consensus       228 ~~~~L~s~~~~~itG~~i~vdgG~~~~~  255 (256)
T 3gaf_A          228 AALFLCSPAAAWISGQVLTVSGGGVQEL  255 (256)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTSCCC-
T ss_pred             HHHHHcCCcccCccCCEEEECCCccccC
Confidence            9999997543   344899988876554

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.86  E-value=7.7e-21  Score=164.66  Aligned_cols=225  Identities=13%  Similarity=0.078  Sum_probs=149.4

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCccccc----CCCCCccccCcccccCcchHHhhcc-------CC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (363)
                      .++++|||||+|+||++++++|+++|++|++++|+.+..+..    ...........+|+.|.+++.++++       ++
T Consensus         5 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   84 (257)
T 3imf_A            5 KEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGRI   84 (257)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            457899999999999999999999999999999987654332    1212222345689999988887765       68


Q ss_pred             CEEEEccCCCCC---CCCChhhHHHHHHHHHHHHHHHHHHHHhC---CCCCCCeEEEeccceecCCcccccccCCCcchh
Q 017977          118 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES---PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYC  191 (363)
Q Consensus       118 d~Vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~  191 (363)
                      |+|||+||....   ...+.+..+..+++|+.++.++++++.+.   ..+..++|++||..+..+       .+....|.
T Consensus        85 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------~~~~~~Y~  157 (257)
T 3imf_A           85 DILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDA-------GPGVIHSA  157 (257)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSC-------CTTCHHHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccC-------CCCcHHHH
Confidence            999999996433   23456677889999999999999988431   034567999999854222       23334566


Q ss_pred             hhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc----cchHHHHHHHhCCCCCCCCCccccccHH
Q 017977          192 AKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL----AKMIPLFMMFAGGPLGSGQQWFSWIHLD  267 (363)
Q Consensus       192 ~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~i~v~  267 (363)
                      .+|.+...+.++  +..+     +....|+++++++||.+.++.....    ..+..  ......++      ..+.+++
T Consensus       158 asKaa~~~l~~~--la~e-----~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~--~~~~~~p~------~r~~~pe  222 (257)
T 3imf_A          158 AAKAGVLAMTKT--LAVE-----WGRKYGIRVNAIAPGPIERTGGADKLWISEEMAK--RTIQSVPL------GRLGTPE  222 (257)
T ss_dssp             HHHHHHHHHHHH--HHHH-----HHHHHCCEEEEEEECCBSSCCCC-------CCSH--HHHTTSTT------CSCBCHH
T ss_pred             HHHHHHHHHHHH--HHHH-----hccccCeEEEEEEECCCcCCcchhhcccCHHHHH--HHHhcCCC------CCCcCHH
Confidence            655443333321  1111     1111389999999999988753211    01111  11112222      2478999


Q ss_pred             HHHHHHHHHhcCCC--CCc-eEEeeCCCCcC
Q 017977          268 DIVNLIYEALSNPS--YRG-VINGTAPNPVR  295 (363)
Q Consensus       268 D~a~a~~~~~~~~~--~~g-~~~i~~~~~~s  295 (363)
                      |+|++++.++....  ..| .+++.+|..++
T Consensus       223 dvA~~v~~L~s~~~~~itG~~i~vdGG~~~~  253 (257)
T 3imf_A          223 EIAGLAYYLCSDEAAYINGTCMTMDGGQHLH  253 (257)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTTTSC
T ss_pred             HHHHHHHHHcCchhcCccCCEEEECCCcccC
Confidence            99999999997543  344 88888876543

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.86  E-value=1.2e-21  Score=169.79  Aligned_cols=226  Identities=13%  Similarity=0.046  Sum_probs=146.0

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc-------CCCEEE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV  121 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~Vi  121 (363)
                      .+++|+||||+|+||++++++|+++|++|++++|+... ......... ....+|+.|.+++.++++       ++|+||
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv   82 (256)
T 2d1y_A            5 AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIGG-AFFQVDLEDERERVRFVEEAAYALGRVDVLV   82 (256)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHTC-EEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhhC-CEEEeeCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            34789999999999999999999999999999998765 322111001 255689999888877664       689999


Q ss_pred             EccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhhhhh
Q 017977          122 NLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYC  196 (363)
Q Consensus       122 ~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~  196 (363)
                      |+||.....   ..+.+..+..+++|+.++.++++++.+.  ..+..++|++||.++.++       .+....|..+|.+
T Consensus        83 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~-------~~~~~~Y~~sK~a  155 (256)
T 2d1y_A           83 NNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFA-------EQENAAYNASKGG  155 (256)
T ss_dssp             ECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSB-------CTTBHHHHHHHHH
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCC-------CCCChhHHHHHHH
Confidence            999975332   2345567889999999999998887642  245678999999854332       2233455555433


Q ss_pred             cccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc-cc-h-HHHH-HHHhCCCCCCCCCccccccHHHHHHH
Q 017977          197 LVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL-AK-M-IPLF-MMFAGGPLGSGQQWFSWIHLDDIVNL  272 (363)
Q Consensus       197 ~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~-~~-~-~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~a  272 (363)
                      ...+.++       ....+. ..++++++++|+.+.++..... .. . .... ...     ........+++++|+|++
T Consensus       156 ~~~~~~~-------la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~dvA~~  222 (256)
T 2d1y_A          156 LVNLTRS-------LALDLA-PLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDW-----EDLHALRRLGKPEEVAEA  222 (256)
T ss_dssp             HHHHHHH-------HHHHHG-GGTEEEEEEEECSBCCHHHHHHHC--------CHHH-----HTTSTTSSCBCHHHHHHH
T ss_pred             HHHHHHH-------HHHHHh-hcCeEEEEEeeCCccCchhhhccccccCCHHHHHHH-----HhcCCCCCCcCHHHHHHH
Confidence            2222211       111111 2389999999999876521100 00 0 0000 001     011122358999999999


Q ss_pred             HHHHhcCCC--CCc-eEEeeCCCCcCH
Q 017977          273 IYEALSNPS--YRG-VINGTAPNPVRL  296 (363)
Q Consensus       273 ~~~~~~~~~--~~g-~~~i~~~~~~s~  296 (363)
                      ++.++..+.  ..| .+++.+|...++
T Consensus       223 ~~~l~s~~~~~~~G~~~~v~gG~~~~~  249 (256)
T 2d1y_A          223 VLFLASEKASFITGAILPVDGGMTASF  249 (256)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTGGGBC
T ss_pred             HHHHhCchhcCCCCCEEEECCCccccc
Confidence            999987643  344 888888765443

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.86  E-value=2.9e-21  Score=169.41  Aligned_cols=230  Identities=13%  Similarity=0.080  Sum_probs=143.4

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCc-ccc----cCCC-CCccccCcccccCcchHHhhcc------
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK-AEL----IFPG-KKTRFFPGVMIAEEPQWRDCIQ------  115 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~----~~~~-~~~~~~~~~d~~~~~~~~~~~~------  115 (363)
                      .+++++|||||+|+||++++++|+++|++|++++|+... .+.    +... ........+|+.|.+++.++++      
T Consensus        23 l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  102 (281)
T 3v2h_A           23 MMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRF  102 (281)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHC
Confidence            345689999999999999999999999999999995432 211    1111 1222245689999988887765      


Q ss_pred             -CCCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcc
Q 017977          116 -GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSD  189 (363)
Q Consensus       116 -~~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~  189 (363)
                       ++|+|||+||.....   ..+.+..+..+++|+.++.++++++.+.  ..+..++|++||..+..+       .+....
T Consensus       103 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-------~~~~~~  175 (281)
T 3v2h_A          103 GGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVA-------SPFKSA  175 (281)
T ss_dssp             SSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-------CTTCHH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccC-------CCCchH
Confidence             789999999975432   2355677889999999999999987432  135567999999854332       233345


Q ss_pred             hhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCccc-chHHHHHH----HhCCCCCCCCCccccc
Q 017977          190 YCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALA-KMIPLFMM----FAGGPLGSGQQWFSWI  264 (363)
Q Consensus       190 ~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~-~~~~~~~~----~~~~~~~~~~~~~~~i  264 (363)
                      |..+|.+...+.+       .....+. ..|+++.+++||.+.++...... ........    .....+..+.....++
T Consensus       176 Y~asKaa~~~l~~-------~la~e~~-~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~  247 (281)
T 3v2h_A          176 YVAAKHGIMGLTK-------TVALEVA-ESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFI  247 (281)
T ss_dssp             HHHHHHHHHHHHH-------HHHHHHG-GGTEEEEEEEECSBCC----------------------------CCTTCSCB
T ss_pred             HHHHHHHHHHHHH-------HHHHHhh-hcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCCCCcc
Confidence            5555433222221       1111111 23899999999999987432110 00000000    0000112233345689


Q ss_pred             cHHHHHHHHHHHhcCCC--CCc-eEEeeCCC
Q 017977          265 HLDDIVNLIYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       265 ~v~D~a~a~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      +++|+|++++.++....  ..| ++++.+|.
T Consensus       248 ~~edvA~~v~~L~s~~a~~itG~~i~vdGG~  278 (281)
T 3v2h_A          248 TVEQVASLALYLAGDDAAQITGTHVSMDGGW  278 (281)
T ss_dssp             CHHHHHHHHHHHHSSGGGGCCSCEEEESTTG
T ss_pred             CHHHHHHHHHHHcCCCcCCCCCcEEEECCCc
Confidence            99999999999997654  344 88887763

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.86  E-value=1.7e-21  Score=167.99  Aligned_cols=220  Identities=16%  Similarity=0.096  Sum_probs=142.7

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCC-----CCCccccCcccccCcchHHhhcc-------C
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP-----GKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (363)
                      .+++|+||||+|+||++++++|+++|++|++++|+..+......     .........+|+.|.+++.++++       +
T Consensus         6 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   85 (248)
T 2pnf_A            6 QGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDG   85 (248)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            34689999999999999999999999999999998754332211     01112244579999988887775       7


Q ss_pred             CCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchh
Q 017977          117 STAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYC  191 (363)
Q Consensus       117 ~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~  191 (363)
                      +|+|||+||.....   ....+..+..+++|+.++.++++++.+.  ..+.+++|++||..+.++       .+....|.
T Consensus        86 ~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-------~~~~~~Y~  158 (248)
T 2pnf_A           86 IDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTG-------NVGQVNYS  158 (248)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHC-------CTTCHHHH
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCC-------CCCCchHH
Confidence            99999999975332   2355667889999999997666655421  145678999999844443       22233455


Q ss_pred             hhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccc-hHHHHHHHhCCCCCCCCCccccccHHHHH
Q 017977          192 AKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAK-MIPLFMMFAGGPLGSGQQWFSWIHLDDIV  270 (363)
Q Consensus       192 ~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  270 (363)
                      .+|.....+.+      . ....+. ..+++++++||+.++++....... +..  ......+.      ..+++++|+|
T Consensus       159 ~sK~a~~~~~~------~-la~e~~-~~~i~v~~v~Pg~v~t~~~~~~~~~~~~--~~~~~~~~------~~~~~~~dva  222 (248)
T 2pnf_A          159 TTKAGLIGFTK------S-LAKELA-PRNVLVNAVAPGFIETDMTAVLSEEIKQ--KYKEQIPL------GRFGSPEEVA  222 (248)
T ss_dssp             HHHHHHHHHHH------H-HHHHHG-GGTEEEEEEEECSBCCGGGGGSCHHHHH--HHHHTCTT------SSCBCHHHHH
T ss_pred             HHHHHHHHHHH------H-HHHHhc-ccCeEEEEEEeceecCchhhhccHHHHH--HHHhcCCC------CCccCHHHHH
Confidence            44322211111      0 111111 238999999999999875322111 111  11122222      2478999999


Q ss_pred             HHHHHHhcCCC---CCceEEeeCC
Q 017977          271 NLIYEALSNPS---YRGVINGTAP  291 (363)
Q Consensus       271 ~a~~~~~~~~~---~~g~~~i~~~  291 (363)
                      ++++.++....   .+.+|++.++
T Consensus       223 ~~~~~l~~~~~~~~~G~~~~v~gg  246 (248)
T 2pnf_A          223 NVVLFLCSELASYITGEVIHVNGG  246 (248)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHhCchhhcCCCcEEEeCCC
Confidence            99999987532   3448888876

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.86  E-value=2.7e-21  Score=167.96  Aligned_cols=224  Identities=18%  Similarity=0.076  Sum_probs=149.0

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCccccc----CCCC-CccccCcccccCcchHHhhcc-------
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI----FPGK-KTRFFPGVMIAEEPQWRDCIQ-------  115 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~-~~~~~~~~d~~~~~~~~~~~~-------  115 (363)
                      ..+++++||||+|+||++++++|+++|++|++++|+..+.+..    .... .......+|+.|.++++++++       
T Consensus         8 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   87 (262)
T 3pk0_A            8 LQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFG   87 (262)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            4457999999999999999999999999999999987654322    1111 122245689999988887765       


Q ss_pred             CCCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEecccee-cCCcccccccCCCcc
Q 017977          116 GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKY-LMRAAHQEMITWLSD  189 (363)
Q Consensus       116 ~~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~-yg~~~~~e~~~~~~~  189 (363)
                      ++|++||+||.....   ..+.+..+..+++|+.++.++++++.+.  ..+..++|++||..+. .+       .+....
T Consensus        88 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~-------~~~~~~  160 (262)
T 3pk0_A           88 GIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITG-------YPGWSH  160 (262)
T ss_dssp             CCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBC-------CTTCHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCC-------CCCChh
Confidence            789999999975332   3356677889999999999998887762  1256789999998431 22       233345


Q ss_pred             hhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc-cchHHHHHHHhCCCCCCCCCccccccHHH
Q 017977          190 YCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAGGPLGSGQQWFSWIHLDD  268 (363)
Q Consensus       190 ~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  268 (363)
                      |..+|.+...+.++       ....+. ..|+++.+++||.+.++..... .....  ......+.      ..+.+++|
T Consensus       161 Y~asK~a~~~l~~~-------la~e~~-~~gi~vn~v~PG~v~t~~~~~~~~~~~~--~~~~~~p~------~r~~~p~d  224 (262)
T 3pk0_A          161 YGATKAAQLGFMRT-------AAIELA-PHKITVNAIMPGNIMTEGLLENGEEYIA--SMARSIPA------GALGTPED  224 (262)
T ss_dssp             HHHHHHHHHHHHHH-------HHHHHG-GGTCEEEEEEECSBCCHHHHTTCHHHHH--HHHTTSTT------SSCBCHHH
T ss_pred             hHHHHHHHHHHHHH-------HHHHHH-hhCcEEEEEEeCcCcCccccccCHHHHH--HHHhcCCC------CCCcCHHH
Confidence            65554333222211       111111 1389999999999988732111 11111  12222222      23688999


Q ss_pred             HHHHHHHHhcCCC--CCc-eEEeeCCCCc
Q 017977          269 IVNLIYEALSNPS--YRG-VINGTAPNPV  294 (363)
Q Consensus       269 ~a~a~~~~~~~~~--~~g-~~~i~~~~~~  294 (363)
                      +|+++..++....  ..| .+++.+|..+
T Consensus       225 va~~v~~L~s~~~~~itG~~i~vdGG~~~  253 (262)
T 3pk0_A          225 IGHLAAFLATKEAGYITGQAIAVDGGQVL  253 (262)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred             HHHHHHHHhCccccCCcCCEEEECCCeec
Confidence            9999999987543  344 8888887544

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.86  E-value=3.5e-21  Score=169.12  Aligned_cols=228  Identities=11%  Similarity=0.089  Sum_probs=147.3

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcc------------cc----cCCCCCccccCcccccCcchHH
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA------------EL----IFPGKKTRFFPGVMIAEEPQWR  111 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~------------~~----~~~~~~~~~~~~~d~~~~~~~~  111 (363)
                      ..+++++||||+|+||+++++.|+++|++|++++|+....            ..    +...........+|+.|.+++.
T Consensus         8 l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~   87 (281)
T 3s55_A            8 FEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALE   87 (281)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHH
Confidence            4457999999999999999999999999999999974321            00    0111112224467999998888


Q ss_pred             hhcc-------CCCEEEEccCCCCC---CCCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcc
Q 017977          112 DCIQ-------GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAA  179 (363)
Q Consensus       112 ~~~~-------~~d~Vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~  179 (363)
                      ++++       ++|++||+||....   ...+.+..+..+++|+.++.++++++.+.  ..+..++|++||..+..+   
T Consensus        88 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---  164 (281)
T 3s55_A           88 SFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSA---  164 (281)
T ss_dssp             HHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSC---
T ss_pred             HHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcCC---
Confidence            7765       78999999997543   23456677889999999999999986431  135567999999844222   


Q ss_pred             cccccCCCcchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc---cchHH--------HH-H
Q 017977          180 HQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL---AKMIP--------LF-M  247 (363)
Q Consensus       180 ~~e~~~~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~---~~~~~--------~~-~  247 (363)
                          .+....|..+|.+...+.++       ....+. ..|+++.+++||.++++.....   ..+.+        .. .
T Consensus       165 ----~~~~~~Y~asK~a~~~~~~~-------la~e~~-~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (281)
T 3s55_A          165 ----NFAQASYVSSKWGVIGLTKC-------AAHDLV-GYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVES  232 (281)
T ss_dssp             ----CTTCHHHHHHHHHHHHHHHH-------HHHHTG-GGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHHH
T ss_pred             ----CCCCchhHHHHHHHHHHHHH-------HHHHHh-hcCcEEEEEecCcccCccccchhhhccccccccccchhHHHH
Confidence                22334555554332222210       111111 2389999999999999854321   00000        00 0


Q ss_pred             HHhCCCCCCCCCccccccHHHHHHHHHHHhcCCC--C-CceEEeeCCCCc
Q 017977          248 MFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS--Y-RGVINGTAPNPV  294 (363)
Q Consensus       248 ~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~--~-~g~~~i~~~~~~  294 (363)
                      ...    ........+.+++|+|++++.+++...  . +.++++.+|...
T Consensus       233 ~~~----~~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~  278 (281)
T 3s55_A          233 VFA----SLHLQYAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGATA  278 (281)
T ss_dssp             HHH----HHCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHH----hhhccCcCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCccc
Confidence            000    001122468999999999999997644  3 448999887644

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.86  E-value=1.1e-21  Score=170.71  Aligned_cols=219  Identities=16%  Similarity=0.008  Sum_probs=145.4

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc-------CCCEE
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAV  120 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~V  120 (363)
                      ..+++|+||||+|+||++++++|+++|++|++++|+........       ...+|+.|.+++.++++       ++|+|
T Consensus        26 l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~-------~~~~Dv~~~~~~~~~~~~~~~~~g~iD~l   98 (266)
T 3uxy_A           26 FEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAADL-------HLPGDLREAAYADGLPGAVAAGLGRLDIV   98 (266)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCCSE-------ECCCCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHhhh-------ccCcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            44578999999999999999999999999999999876544321       23578988887766554       78999


Q ss_pred             EEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhhhh
Q 017977          121 VNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVY  195 (363)
Q Consensus       121 i~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~  195 (363)
                      ||+||.....   ....+..+..+++|+.++.++++++.+.  ..+..++|++||..+..+       .+....|..+|.
T Consensus        99 vnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~-------~~~~~~Y~asKa  171 (266)
T 3uxy_A           99 VNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRP-------GPGHALYCLTKA  171 (266)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBC-------CTTBHHHHHHHH
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCC-------CCCChHHHHHHH
Confidence            9999975432   2356677889999999999999998421  145678999999843222       223345555543


Q ss_pred             hcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc---cc-hH-HH-HHHHhCCCCCCCCCccccccHHHH
Q 017977          196 CLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL---AK-MI-PL-FMMFAGGPLGSGQQWFSWIHLDDI  269 (363)
Q Consensus       196 ~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~---~~-~~-~~-~~~~~~~~~~~~~~~~~~i~v~D~  269 (363)
                      +...+.++       ....+. ..|+++++++||.+.++.....   .. .. .. .......+      ...+.+++|+
T Consensus       172 a~~~l~~~-------la~e~~-~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p------~~r~~~pedv  237 (266)
T 3uxy_A          172 ALASLTQC-------MGMDHA-PQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVP------LGRIAEPEDI  237 (266)
T ss_dssp             HHHHHHHH-------HHHHHG-GGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTTST------TSSCBCHHHH
T ss_pred             HHHHHHHH-------HHHHhh-hcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhcCC------CCCCcCHHHH
Confidence            32222211       111111 1389999999999987632100   00 00 00 11112222      2347899999


Q ss_pred             HHHHHHHhcCCC--CCc-eEEeeCCCCc
Q 017977          270 VNLIYEALSNPS--YRG-VINGTAPNPV  294 (363)
Q Consensus       270 a~a~~~~~~~~~--~~g-~~~i~~~~~~  294 (363)
                      |++++.++....  ..| ++++.+|..+
T Consensus       238 A~~v~~L~s~~~~~itG~~i~vdGG~~~  265 (266)
T 3uxy_A          238 ADVVLFLASDAARYLCGSLVEVNGGKAV  265 (266)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred             HHHHHHHhCchhcCCcCCEEEECcCEeC
Confidence            999999997653  334 8888887654

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.86  E-value=6.1e-21  Score=165.97  Aligned_cols=224  Identities=15%  Similarity=0.104  Sum_probs=145.8

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCC-CccccCcccccCcchHHhhcc-------CCCEE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK-KTRFFPGVMIAEEPQWRDCIQ-------GSTAV  120 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~-------~~d~V  120 (363)
                      .+|+|+||||+|+||++++++|+++|++|++++|+........... .......+|+.|.+++.++++       ++|+|
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~l   90 (263)
T 3ak4_A           11 SGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDLL   90 (263)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCCEE
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            3468999999999999999999999999999999875543321111 012245689999998887776       79999


Q ss_pred             EEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCC-CCCeEEEeccceecCCcccccccCCCcchhhhh
Q 017977          121 VNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLELVKPKYLMRAAHQEMITWLSDYCAKV  194 (363)
Q Consensus       121 i~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~-~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~  194 (363)
                      ||+||.....   ....+..+..+++|+.++.++++++.+.  ..+ ..++|++||..+..+       .+....|..+|
T Consensus        91 v~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------~~~~~~Y~~sK  163 (263)
T 3ak4_A           91 CANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVG-------APLLAHYSASK  163 (263)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSC-------CTTCHHHHHHH
T ss_pred             EECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccC-------CCCchhHHHHH
Confidence            9999974322   2345667889999999999998887653  123 578999999843221       23334555554


Q ss_pred             hhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccch---H-----HHH--HHHhCCCCCCCCCccccc
Q 017977          195 YCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKM---I-----PLF--MMFAGGPLGSGQQWFSWI  264 (363)
Q Consensus       195 ~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~---~-----~~~--~~~~~~~~~~~~~~~~~i  264 (363)
                      .+...+.+      . ....+. ..|++++++||+.++++........   .     ...  ......++      ..++
T Consensus       164 ~a~~~~~~------~-la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~------~~~~  229 (263)
T 3ak4_A          164 FAVFGWTQ------A-LAREMA-PKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPL------GRIE  229 (263)
T ss_dssp             HHHHHHHH------H-HHHHHG-GGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTCTT------CSCB
T ss_pred             HHHHHHHH------H-HHHHHh-HcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhcCCC------CCCc
Confidence            33222221      1 111111 2389999999999987632110000   0     111  11122222      3488


Q ss_pred             cHHHHHHHHHHHhcCCC--CCc-eEEeeCCCC
Q 017977          265 HLDDIVNLIYEALSNPS--YRG-VINGTAPNP  293 (363)
Q Consensus       265 ~v~D~a~a~~~~~~~~~--~~g-~~~i~~~~~  293 (363)
                      +++|+|++++.++....  ..| .+++.+|..
T Consensus       230 ~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~  261 (263)
T 3ak4_A          230 EPEDVADVVVFLASDAARFMTGQGINVTGGVR  261 (263)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred             CHHHHHHHHHHHhCccccCCCCCEEEECcCEe
Confidence            99999999999997542  344 888888743

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.86  E-value=7.5e-21  Score=163.27  Aligned_cols=216  Identities=19%  Similarity=0.150  Sum_probs=143.6

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc------CCCEEEEc
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ------GSTAVVNL  123 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~------~~d~Vi~~  123 (363)
                      +|+|+||||+|+||++++++|+++|++|++++|+.. ....       ....+|+.|.+++.++++      ++|+|||+
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~~~~-------~~~~~D~~~~~~~~~~~~~~~~~~~~d~li~~   73 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-GEDL-------IYVEGDVTREEDVRRAVARAQEEAPLFAVVSA   73 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-SSSS-------EEEECCTTCHHHHHHHHHHHHHHSCEEEEEEC
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-ccce-------EEEeCCCCCHHHHHHHHHHHHhhCCceEEEEc
Confidence            368999999999999999999999999999999876 2211       255689999998888876      78999999


Q ss_pred             cCCCCCCCC-------ChhhHHHHHHHHHHHHHHHHHHHHhC-CC-C------CCCeEEEeccceecCCcccccccCCCc
Q 017977          124 AGTPIGTRW-------SSEIKKEIKESRIRVTSKVVDLINES-PE-G------VRPSVLELVKPKYLMRAAHQEMITWLS  188 (363)
Q Consensus       124 a~~~~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-~------~~~~v~~SS~~~~yg~~~~~e~~~~~~  188 (363)
                      ||.......       ..+..+..+++|+.++.++++++.+. .. +      ..++|++||..+ +.      ..+...
T Consensus        74 ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~-~~------~~~~~~  146 (242)
T 1uay_A           74 AGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAA-FE------GQIGQA  146 (242)
T ss_dssp             CCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHH-HH------CCTTCH
T ss_pred             ccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhh-cc------CCCCCc
Confidence            997533211       12267889999999999999988763 11 1      127999999843 22      122334


Q ss_pred             chhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc-cchHHHHHHHhCCCCCCCCCccccccHH
Q 017977          189 DYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAGGPLGSGQQWFSWIHLD  267 (363)
Q Consensus       189 ~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~  267 (363)
                      .|..+|.+...+.+      . ....+. ..|++++++||+.++++..... ..+..  ......++.     ..+++++
T Consensus       147 ~Y~~sK~a~~~~~~------~-l~~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~--~~~~~~~~~-----~~~~~~~  211 (242)
T 1uay_A          147 AYAASKGGVVALTL------P-AARELA-GWGIRVVTVAPGLFDTPLLQGLPEKAKA--SLAAQVPFP-----PRLGRPE  211 (242)
T ss_dssp             HHHHHHHHHHHHHH------H-HHHHHG-GGTEEEEEEEECSCSSHHHHTSCHHHHH--HHHTTCCSS-----CSCCCHH
T ss_pred             hhhHHHHHHHHHHH------H-HHHHHh-hcCcEEEEEEeccCcchhhhccchhHHH--HHHhhCCCc-----ccCCCHH
Confidence            45554322221111      0 111111 2389999999999998742211 11111  112222220     2478999


Q ss_pred             HHHHHHHHHhcCCCCCc-eEEeeCCCCcC
Q 017977          268 DIVNLIYEALSNPSYRG-VINGTAPNPVR  295 (363)
Q Consensus       268 D~a~a~~~~~~~~~~~g-~~~i~~~~~~s  295 (363)
                      |+|++++.++......| .|++.+|..++
T Consensus       212 dva~~~~~l~~~~~~~G~~~~v~gG~~~~  240 (242)
T 1uay_A          212 EYAALVLHILENPMLNGEVVRLDGALRMA  240 (242)
T ss_dssp             HHHHHHHHHHHCTTCCSCEEEESTTCCCC
T ss_pred             HHHHHHHHHhcCCCCCCcEEEEcCCeecC
Confidence            99999999998744444 88988876543

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.86  E-value=9.2e-21  Score=163.49  Aligned_cols=214  Identities=14%  Similarity=0.071  Sum_probs=137.0

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCC--CEEEEEeCCCCcccccCCC-CCccccCcccccCcchHHhhcc---------CC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ---------GS  117 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~---------~~  117 (363)
                      +++|+||||+|+||+++++.|+++|  ++|++++|+....+.+... .....+..+|+.|.+++.++++         ++
T Consensus         3 ~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~~i   82 (250)
T 1yo6_A            3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGL   82 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCC
T ss_pred             CCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCCCC
Confidence            4689999999999999999999999  9999999987665443221 1122245689999888887776         79


Q ss_pred             CEEEEccCCCC-C---CCCChhhHHHHHHHHHHHHHHHHHHHHhC-C-C------C-----CCCeEEEeccceecCCccc
Q 017977          118 TAVVNLAGTPI-G---TRWSSEIKKEIKESRIRVTSKVVDLINES-P-E------G-----VRPSVLELVKPKYLMRAAH  180 (363)
Q Consensus       118 d~Vi~~a~~~~-~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~------~-----~~~~v~~SS~~~~yg~~~~  180 (363)
                      |+|||+||... .   .....+..+..+++|+.++.++++++.+. . .      +     ..++|++||..+.++....
T Consensus        83 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~  162 (250)
T 1yo6_A           83 SLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTS  162 (250)
T ss_dssp             CEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTCCS
T ss_pred             cEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccCCccc
Confidence            99999999754 2   22345667889999999999998887652 0 1      3     5789999998543331110


Q ss_pred             ccccCCCcchhhhhhhcccchhhHHHHHHHHHHHhcc--CCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCC
Q 017977          181 QEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKV--NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQ  258 (363)
Q Consensus       181 ~e~~~~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~--~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~  258 (363)
                      ....++...|..          +|.............  ..|+++++++|+.+.++....                    
T Consensus       163 ~~~~~~~~~Y~~----------sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~--------------------  212 (250)
T 1yo6_A          163 GSAQFPVLAYRM----------SKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK--------------------  212 (250)
T ss_dssp             TTSSSCBHHHHH----------HHHHHHHHHHHHHHHTGGGTCEEEEEECCCC---------------------------
T ss_pred             ccccCCccHHHH----------HHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC--------------------
Confidence            000012223443          443333222222111  238999999999987764211                    


Q ss_pred             CccccccHHHHHHHHHHHhcCCC--CCceEEeeCCCCcC
Q 017977          259 QWFSWIHLDDIVNLIYEALSNPS--YRGVINGTAPNPVR  295 (363)
Q Consensus       259 ~~~~~i~v~D~a~a~~~~~~~~~--~~g~~~i~~~~~~s  295 (363)
                        ..+++++|+|++++.++....  ..|.|...++..++
T Consensus       213 --~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g~~~~  249 (250)
T 1yo6_A          213 --NAALTVEQSTAELISSFNKLDNSHNGRFFMRNLKPYE  249 (250)
T ss_dssp             --------HHHHHHHHHHHTTCCGGGTTCEEETTEEECC
T ss_pred             --CCCCCHHHHHHHHHHHHhcccccCCCeEEEECCcCCC
Confidence              136789999999999998765  45666655544443

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.86  E-value=1.3e-20  Score=166.12  Aligned_cols=224  Identities=15%  Similarity=0.045  Sum_probs=147.0

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccc-----cCCCCCccccCcccccCcchHHhhcc-------C
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL-----IFPGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~~~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (363)
                      .+++||||||+|+||++++++|+++|++|++++|+......     ............+|+.|.+++.++++       +
T Consensus        46 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  125 (291)
T 3ijr_A           46 KGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGS  125 (291)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            45799999999999999999999999999999998753211     11112222245679999988877765       6


Q ss_pred             CCEEEEccCCCCCC----CCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhh
Q 017977          117 STAVVNLAGTPIGT----RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCA  192 (363)
Q Consensus       117 ~d~Vi~~a~~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~  192 (363)
                      +|+|||+||.....    ..+.+..+..+++|+.++.++++++.+......++|++||..+..+       .+....|..
T Consensus       126 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~-------~~~~~~Y~a  198 (291)
T 3ijr_A          126 LNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEG-------NETLIDYSA  198 (291)
T ss_dssp             CCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHC-------CTTCHHHHH
T ss_pred             CCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCC-------CCCChhHHH
Confidence            89999999974321    2356677889999999999999999885223457999999854322       223345555


Q ss_pred             hhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHH
Q 017977          193 KVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL  272 (363)
Q Consensus       193 ~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a  272 (363)
                      +|.+...+.++       ....+. ..|+++.+++||.+.++....... .......     ........+.+++|+|++
T Consensus       199 sKaa~~~l~~~-------la~e~~-~~gi~vn~v~PG~v~T~~~~~~~~-~~~~~~~-----~~~~p~~r~~~p~dvA~~  264 (291)
T 3ijr_A          199 TKGAIVAFTRS-------LSQSLV-QKGIRVNGVAPGPIWTPLIPSSFD-EKKVSQF-----GSNVPMQRPGQPYELAPA  264 (291)
T ss_dssp             HHHHHHHHHHH-------HHHHHG-GGTCEEEEEEECSBCSTHHHHHSC-HHHHHHT-----TTTSTTSSCBCGGGTHHH
T ss_pred             HHHHHHHHHHH-------HHHHHh-hcCEEEEEEeeCCCcCCcccccCC-HHHHHHH-----HccCCCCCCcCHHHHHHH
Confidence            54332222211       111111 238999999999999873211000 0011111     111223347889999999


Q ss_pred             HHHHhcCCC--CCc-eEEeeCCCC
Q 017977          273 IYEALSNPS--YRG-VINGTAPNP  293 (363)
Q Consensus       273 ~~~~~~~~~--~~g-~~~i~~~~~  293 (363)
                      ++.++....  ..| .+++.+|..
T Consensus       265 v~~L~s~~~~~itG~~i~vdGG~~  288 (291)
T 3ijr_A          265 YVYLASSDSSYVTGQMIHVNGGVI  288 (291)
T ss_dssp             HHHHHSGGGTTCCSCEEEESSSCC
T ss_pred             HHHHhCCccCCCcCCEEEECCCcc
Confidence            999987543  344 888887754

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.85  E-value=2.3e-21  Score=168.98  Aligned_cols=220  Identities=12%  Similarity=0.055  Sum_probs=132.3

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCC----CCCccccCcccccCcchHHhhc--------cC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCI--------QG  116 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~--------~~  116 (363)
                      .+++|+||||+|+||++++++|+++|++|++++|+.........    .........+|+.+.+++.+++        .+
T Consensus        13 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   92 (266)
T 1xq1_A           13 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGK   92 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            34789999999999999999999999999999998754332110    1111224457999888887766        46


Q ss_pred             CCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchh
Q 017977          117 STAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYC  191 (363)
Q Consensus       117 ~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~  191 (363)
                      +|+|||+||.....   ....+..+..+++|+.++.++++++.+.  ..+.+++|++||.++.++       .+....|.
T Consensus        93 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-------~~~~~~Y~  165 (266)
T 1xq1_A           93 LDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVS-------ASVGSIYS  165 (266)
T ss_dssp             CSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC-----------------CCHHH
T ss_pred             CcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccC-------CCCCchHH
Confidence            89999999974322   2355667889999999999999988421  046678999999843222       22233455


Q ss_pred             hhhhhcccchhhHHHHHHHHHHHh-c-cCCCceEEEEeeceEEeCCCCcccchHHHH--HHHhCCCCCCCCCccccccHH
Q 017977          192 AKVYCLVSFNRGVLVCREWEGTAL-K-VNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPLGSGQQWFSWIHLD  267 (363)
Q Consensus       192 ~~~~~~~~y~~~k~~~~~~~~~~~-~-~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~v~  267 (363)
                      .+|.+          ......... . ...|++++++||+.++++......  ...+  ......+      ...+++++
T Consensus       166 ~sK~a----------~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~~~~~~~~~~~~~------~~~~~~~~  227 (266)
T 1xq1_A          166 ATKGA----------LNQLARNLACEWASDGIRANAVAPAVIATPLAEAVY--DDEFKKVVISRKP------LGRFGEPE  227 (266)
T ss_dssp             HHHHH----------HHHHHHHHHHHHGGGTCEEEEEECCSCC---------------------------------CCGG
T ss_pred             HHHHH----------HHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhc--CHHHHHHHHhcCC------CCCCcCHH
Confidence            55322          222211111 1 123899999999999998532210  0100  0011111      12478999


Q ss_pred             HHHHHHHHHhcCCC--CCc-eEEeeCCCC
Q 017977          268 DIVNLIYEALSNPS--YRG-VINGTAPNP  293 (363)
Q Consensus       268 D~a~a~~~~~~~~~--~~g-~~~i~~~~~  293 (363)
                      |+|++++.++....  ..| .+++.+|..
T Consensus       228 dva~~~~~l~~~~~~~~~G~~~~v~gG~~  256 (266)
T 1xq1_A          228 EVSSLVAFLCMPAASYITGQTICVDGGLT  256 (266)
T ss_dssp             GGHHHHHHHTSGGGTTCCSCEEECCCCEE
T ss_pred             HHHHHHHHHcCccccCccCcEEEEcCCcc
Confidence            99999999986532  334 888888743

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.85  E-value=3.1e-21  Score=166.70  Aligned_cols=225  Identities=14%  Similarity=0.047  Sum_probs=142.1

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCC---CCCccccCcccccCcchHHhhcc-------CCC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP---GKKTRFFPGVMIAEEPQWRDCIQ-------GST  118 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~-------~~d  118 (363)
                      .+++|+||||+|+||++++++|+++|++|++++|+.........   .........+|+.|.+++.++++       .+|
T Consensus         5 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   84 (251)
T 1zk4_A            5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVS   84 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            34789999999999999999999999999999998754332110   00112245679999888877765       489


Q ss_pred             EEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCC-CCeEEEeccceecCCcccccccCCCcchhh
Q 017977          119 AVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGV-RPSVLELVKPKYLMRAAHQEMITWLSDYCA  192 (363)
Q Consensus       119 ~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~-~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~  192 (363)
                      +|||+||.....   ....+..+..+++|+.++.++.+++.+.  ..+. +++|++||..+.++       .+....|..
T Consensus        85 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-------~~~~~~Y~~  157 (251)
T 1zk4_A           85 TLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVG-------DPSLGAYNA  157 (251)
T ss_dssp             EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSC-------CTTCHHHHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccC-------CCCCccchH
Confidence            999999975332   2345667889999999887766665432  1454 68999999843222       223334555


Q ss_pred             hhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHH
Q 017977          193 KVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL  272 (363)
Q Consensus       193 ~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a  272 (363)
                      +|.+...+.++      +..+......+++++++||+.++++.......  ......    +........+++++|+|++
T Consensus       158 sK~a~~~~~~~------~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~--~~~~~~----~~~~~~~~~~~~~~dva~~  225 (251)
T 1zk4_A          158 SKGAVRIMSKS------AALDCALKDYDVRVNTVHPGYIKTPLVDDLPG--AEEAMS----QRTKTPMGHIGEPNDIAYI  225 (251)
T ss_dssp             HHHHHHHHHHH------HHHHHHHTTCSEEEEEEEECCBCCHHHHTSTT--HHHHHT----STTTCTTSSCBCHHHHHHH
T ss_pred             HHHHHHHHHHH------HHHHhcccCCCeEEEEEeeCcCcchhhhhcCc--hhhhHH----HhhcCCCCCCcCHHHHHHH
Confidence            54322222211      11111111348999999999999874221110  011100    0111112348899999999


Q ss_pred             HHHHhcCCC--CCc-eEEeeCCC
Q 017977          273 IYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       273 ~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      ++.++....  ..| .+++.+|.
T Consensus       226 ~~~l~~~~~~~~~G~~~~v~gG~  248 (251)
T 1zk4_A          226 CVYLASNESKFATGSEFVVDGGY  248 (251)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHcCcccccccCcEEEECCCc
Confidence            999997543  234 88888764

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.85  E-value=5.7e-21  Score=165.72  Aligned_cols=218  Identities=12%  Similarity=0.072  Sum_probs=142.3

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCC-CccccCcccccCcchHHhhcc-------CCCEE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK-KTRFFPGVMIAEEPQWRDCIQ-------GSTAV  120 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~-------~~d~V  120 (363)
                      .+++|+||||+|+||++++++|+++|++|++++|+..+.+...... .......+|+.|.+++.++++       ++|+|
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~l   85 (260)
T 1nff_A            6 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVL   85 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            3468999999999999999999999999999999875543221110 011244689999998888776       79999


Q ss_pred             EEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhhhh
Q 017977          121 VNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVY  195 (363)
Q Consensus       121 i~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~  195 (363)
                      ||+||.....   ..+.+..+..+++|+.++.++.+++.+.  ..+..++|++||.++.++       .+....|..+|.
T Consensus        86 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------~~~~~~Y~~sK~  158 (260)
T 1nff_A           86 VNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAG-------TVACHGYTATKF  158 (260)
T ss_dssp             EECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-------CTTBHHHHHHHH
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCC-------CCCchhHHHHHH
Confidence            9999975332   2345667889999999996665554321  045678999999843222       122334555443


Q ss_pred             hcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHHHH
Q 017977          196 CLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE  275 (363)
Q Consensus       196 ~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~  275 (363)
                      +...+.++       ....+. ..|++++++||+.++++... ...          ..+. ......+.+++|+|++++.
T Consensus       159 a~~~~~~~-------la~e~~-~~gi~v~~v~Pg~v~t~~~~-~~~----------~~~~-~~~~~~~~~~~dvA~~v~~  218 (260)
T 1nff_A          159 AVRGLTKS-------TALELG-PSGIRVNSIHPGLVKTPMTD-WVP----------EDIF-QTALGRAAEPVEVSNLVVY  218 (260)
T ss_dssp             HHHHHHHH-------HHHHHG-GGTEEEEEEEECCBCSGGGT-TSC----------TTCS-CCSSSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHH-------HHHHhC-ccCcEEEEEEeCCCCCCccc-cch----------hhHH-hCccCCCCCHHHHHHHHHH
Confidence            22222110       111111 23899999999999987432 100          0000 1112347899999999999


Q ss_pred             HhcCCC--C-CceEEeeCCCC
Q 017977          276 ALSNPS--Y-RGVINGTAPNP  293 (363)
Q Consensus       276 ~~~~~~--~-~g~~~i~~~~~  293 (363)
                      ++....  . +..+++.++..
T Consensus       219 l~s~~~~~~~G~~~~v~gG~~  239 (260)
T 1nff_A          219 LASDESSYSTGAEFVVDGGTV  239 (260)
T ss_dssp             HHSGGGTTCCSCEEEESTTGG
T ss_pred             HhCccccCCcCCEEEECCCee
Confidence            987543  2 34888888743

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.85  E-value=8.5e-21  Score=164.25  Aligned_cols=220  Identities=15%  Similarity=0.023  Sum_probs=141.6

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcc--cccCCCCCccccCcccccCcchHHhhcc-------CCCEE
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA--ELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAV  120 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~V  120 (363)
                      +++|+||||+|+||++++++|+++|++|++++|+....  ..+...........+|+.|.+++.++++       ++|+|
T Consensus         4 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   83 (255)
T 2q2v_A            4 GKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGVDIL   83 (255)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCSEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            46899999999999999999999999999999987521  1111111112244679999998888776       79999


Q ss_pred             EEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHH----HhCCCCCCCeEEEeccceecCCcccccccCCCcchhhh
Q 017977          121 VNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAK  193 (363)
Q Consensus       121 i~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~  193 (363)
                      ||+||.....   ....+..+..+++|+.++.++.+++    .+  .+..++|++||.++.++       .+....|..+
T Consensus        84 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~~~g~iv~isS~~~~~~-------~~~~~~Y~~s  154 (255)
T 2q2v_A           84 VNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRA--RNWGRIINIASVHGLVG-------STGKAAYVAA  154 (255)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--TTCEEEEEECCGGGTSC-------CTTBHHHHHH
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH--cCCcEEEEEcCchhccC-------CCCchhHHHH
Confidence            9999974332   2345667889999999877666655    45  56678999999843222       1223345554


Q ss_pred             hhhcccchhhHHHHHHHHHHHh-cc-CCCceEEEEeeceEEeCCCCcccchHHHH--------HHHhCCCCCCCCCcccc
Q 017977          194 VYCLVSFNRGVLVCREWEGTAL-KV-NKDVRLALIRIGIVLGKDGGALAKMIPLF--------MMFAGGPLGSGQQWFSW  263 (363)
Q Consensus       194 ~~~~~~y~~~k~~~~~~~~~~~-~~-~~~~~~~ilRp~~v~g~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~  263 (363)
                      |.+          ......... +. ..|+++++++|+.++++............        .....    .......+
T Consensus       155 K~a----------~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~p~~~~  220 (255)
T 2q2v_A          155 KHG----------VVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLA----EKQPSLAF  220 (255)
T ss_dssp             HHH----------HHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHHT----TTCTTCCC
T ss_pred             HHH----------HHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhcccccccccchHHHHHHHHh----ccCCCCCC
Confidence            322          222211111 11 23899999999999887421110000000        11101    11122358


Q ss_pred             ccHHHHHHHHHHHhcCCC--CCc-eEEeeCCC
Q 017977          264 IHLDDIVNLIYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       264 i~v~D~a~a~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      ++++|+|++++.++..+.  ..| .|++.++.
T Consensus       221 ~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~  252 (255)
T 2q2v_A          221 VTPEHLGELVLFLCSEAGSQVRGAAWNVDGGW  252 (255)
T ss_dssp             BCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             cCHHHHHHHHHHHhCCccCCCCCCEEEECCCc
Confidence            999999999999987543  334 88888764

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.85  E-value=3.1e-21  Score=167.50  Aligned_cols=224  Identities=13%  Similarity=0.077  Sum_probs=146.3

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccC----CCCCccccCcccccCcchHHhhcc-------CC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (363)
                      .+++|+||||+|+||+++++.|+++|++|++++|+.++.+...    ..........+|+.|.+++.++++       ++
T Consensus        13 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   92 (260)
T 2zat_A           13 ENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGV   92 (260)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            3478999999999999999999999999999999875433211    111112234579999888877665       79


Q ss_pred             CEEEEccCCCCC----CCCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchh
Q 017977          118 TAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYC  191 (363)
Q Consensus       118 d~Vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~  191 (363)
                      |+|||+||....    ...+.+..+..+++|+.++.++++++.+.  ..+.+++|++||.++ +.      ..+....|.
T Consensus        93 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~-~~------~~~~~~~Y~  165 (260)
T 2zat_A           93 DILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGA-YH------PFPNLGPYN  165 (260)
T ss_dssp             CEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGG-TS------CCTTBHHHH
T ss_pred             CEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhh-cC------CCCCchhHH
Confidence            999999996421    23455667889999999998888887532  145678999999843 32      122333555


Q ss_pred             hhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc---cchHHHHHHHhCCCCCCCCCccccccHHH
Q 017977          192 AKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL---AKMIPLFMMFAGGPLGSGQQWFSWIHLDD  268 (363)
Q Consensus       192 ~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  268 (363)
                      .+|.+...+.++      +.. .+. ..|+++++++|+.+.++.....   ......+  ....+      ...+.+++|
T Consensus       166 ~sK~a~~~~~~~------la~-e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~--~~~~~------~~~~~~~~d  229 (260)
T 2zat_A          166 VSKTALLGLTKN------LAV-ELA-PRNIRVNCLAPGLIKTNFSQVLWMDKARKEYM--KESLR------IRRLGNPED  229 (260)
T ss_dssp             HHHHHHHHHHHH------HHH-HHG-GGTEEEEEEEECSBCSSTTHHHHSSHHHHHHH--HHHHT------CSSCBCGGG
T ss_pred             HHHHHHHHHHHH------HHH-Hhc-ccCeEEEEEEECcccCccchhcccChHHHHHH--HhcCC------CCCCCCHHH
Confidence            554333222211      111 111 2389999999999988743210   0000111  11111      124789999


Q ss_pred             HHHHHHHHhcCCC---CCceEEeeCCCCcC
Q 017977          269 IVNLIYEALSNPS---YRGVINGTAPNPVR  295 (363)
Q Consensus       269 ~a~a~~~~~~~~~---~~g~~~i~~~~~~s  295 (363)
                      +|+++..++..+.   .+.++++.+|...+
T Consensus       230 va~~v~~l~s~~~~~~tG~~~~vdgG~~~s  259 (260)
T 2zat_A          230 CAGIVSFLCSEDASYITGETVVVGGGTASR  259 (260)
T ss_dssp             GHHHHHHHTSGGGTTCCSCEEEESTTCCCC
T ss_pred             HHHHHHHHcCcccCCccCCEEEECCCcccc
Confidence            9999999987543   33489999887665

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.85  E-value=3.4e-21  Score=168.77  Aligned_cols=223  Identities=16%  Similarity=0.165  Sum_probs=144.6

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccC----CCCCccccCcccccCcchHHhhcc-------CC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (363)
                      .+++|+||||+|+||++++++|+++|++|++++|+....+...    ..........+|+.|.+++.++++       ++
T Consensus        21 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  100 (277)
T 2rhc_B           21 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPV  100 (277)
T ss_dssp             TSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            4568999999999999999999999999999999875533211    111112244689999888877765       68


Q ss_pred             CEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC----CCCCCCeEEEeccceecCCcccccccCCCcch
Q 017977          118 TAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES----PEGVRPSVLELVKPKYLMRAAHQEMITWLSDY  190 (363)
Q Consensus       118 d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~  190 (363)
                      |+|||+||.....   ....+..+..+++|+.++.++++++.+.    ..+..++|++||.++.++       .+....|
T Consensus       101 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~-------~~~~~~Y  173 (277)
T 2rhc_B          101 DVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQG-------VVHAAPY  173 (277)
T ss_dssp             SEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSC-------CTTCHHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccC-------CCCCccH
Confidence            9999999974332   2345667889999999999999998761    014568999999854332       2233445


Q ss_pred             hhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccc-hH-------HH-HH-HHhCCCCCCCCCc
Q 017977          191 CAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAK-MI-------PL-FM-MFAGGPLGSGQQW  260 (363)
Q Consensus       191 ~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~-~~-------~~-~~-~~~~~~~~~~~~~  260 (363)
                      ..+|.+...+.++       ....+. ..|+++++++|+.+.++....... ..       .. .. .....++      
T Consensus       174 ~asK~a~~~~~~~-------la~e~~-~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~------  239 (277)
T 2rhc_B          174 SASKHGVVGFTKA-------LGLELA-RTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPI------  239 (277)
T ss_dssp             HHHHHHHHHHHHH-------HHHHHT-TTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHSTT------
T ss_pred             HHHHHHHHHHHHH-------HHHHHH-HhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHhcCCC------
Confidence            5554322222110       111111 238999999999998763211100 00       00 11 1111122      


Q ss_pred             cccccHHHHHHHHHHHhcCCC--CCc-eEEeeCCC
Q 017977          261 FSWIHLDDIVNLIYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       261 ~~~i~v~D~a~a~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      ..+++++|+|++++.++..+.  ..| ++++.+|.
T Consensus       240 ~r~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdGG~  274 (277)
T 2rhc_B          240 GRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGGL  274 (277)
T ss_dssp             SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CCCcCHHHHHHHHHHHhCchhcCCCCcEEEECCCc
Confidence            248899999999999987543  344 88887763

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.85  E-value=5e-21  Score=164.91  Aligned_cols=223  Identities=15%  Similarity=0.082  Sum_probs=149.1

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCC-CccccCcccccCcchHHhhcc-------CCCE
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK-KTRFFPGVMIAEEPQWRDCIQ-------GSTA  119 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~-------~~d~  119 (363)
                      ..+++++||||+|+||++++++|+++|++|++++|+....+...... .......+|+.|.++++++++       ++|+
T Consensus         7 l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   86 (248)
T 3op4_A            7 LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDI   86 (248)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCCSE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            34579999999999999999999999999999999876543321110 111244689999988887775       7899


Q ss_pred             EEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhhh
Q 017977          120 VVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKV  194 (363)
Q Consensus       120 Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~  194 (363)
                      +||+||.....   ..+.+..+..+++|+.++.++++++.+.  ..+..++|++||..+.++       .+....|..+|
T Consensus        87 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~-------~~~~~~Y~asK  159 (248)
T 3op4_A           87 LVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMG-------NAGQANYAAAK  159 (248)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC-------CTTCHHHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCC-------CCCChHHHHHH
Confidence            99999975432   2356677889999999999999887542  134567999999854333       23344566654


Q ss_pred             hhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHHH
Q 017977          195 YCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY  274 (363)
Q Consensus       195 ~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~  274 (363)
                      .+...+.++       ....+. ..|+++..++||.+..+.......- .........+.      ..+.+++|+|+++.
T Consensus       160 ~a~~~l~~~-------la~e~~-~~gi~vn~v~PG~v~T~~~~~~~~~-~~~~~~~~~p~------~r~~~p~dva~~v~  224 (248)
T 3op4_A          160 AGVIGFTKS-------MAREVA-SRGVTVNTVAPGFIETDMTKALNDE-QRTATLAQVPA------GRLGDPREIASAVA  224 (248)
T ss_dssp             HHHHHHHHH-------HHHHHG-GGTEEEEEEEECSBSSTTTTTSCHH-HHHHHHHTCTT------CSCBCHHHHHHHHH
T ss_pred             HHHHHHHHH-------HHHHHH-HhCeEEEEEeeCCCCCchhhhcCHH-HHHHHHhcCCC------CCCcCHHHHHHHHH
Confidence            333322221       111111 2389999999999988754322111 11122222222      24789999999999


Q ss_pred             HHhcCCC--CCc-eEEeeCCC
Q 017977          275 EALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       275 ~~~~~~~--~~g-~~~i~~~~  292 (363)
                      .++....  ..| ++++.+|.
T Consensus       225 ~L~s~~~~~itG~~i~vdgG~  245 (248)
T 3op4_A          225 FLASPEAAYITGETLHVNGGM  245 (248)
T ss_dssp             HHHSGGGTTCCSCEEEESTTS
T ss_pred             HHcCCccCCccCcEEEECCCe
Confidence            9987543  334 88887764

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.85  E-value=2.7e-21  Score=169.29  Aligned_cols=221  Identities=16%  Similarity=0.003  Sum_probs=143.1

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeC-CCCccccc----CCCCCccccCcccccCcchHHhhcc-------C
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTR-SRSKAELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (363)
                      .+|+|+||||+|+||++++++|+++|++|++++| +....+..    ...........+|+.|.+++.++++       +
T Consensus        20 ~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   99 (274)
T 1ja9_A           20 AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGG   99 (274)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            4578999999999999999999999999999999 43332211    1111112245689999988887776       7


Q ss_pred             CCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC-CCCCCCeEEEeccceecCCcccccccCCCcchhh
Q 017977          117 STAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCA  192 (363)
Q Consensus       117 ~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~  192 (363)
                      +|+|||+||.....   ....+..+..+++|+.++.++++++.+. +.+ +++|++||.++.+..      .+....|..
T Consensus       100 ~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~~~------~~~~~~Y~~  172 (274)
T 1ja9_A          100 LDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG-GRIILTSSIAAVMTG------IPNHALYAG  172 (274)
T ss_dssp             EEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE-EEEEEECCGGGTCCS------CCSCHHHHH
T ss_pred             CCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CEEEEEcChHhccCC------CCCCchHHH
Confidence            89999999975321   2355667889999999999999998873 113 679999998432121      122334554


Q ss_pred             hhhhcccchhhHHHHHHHHHHHhc--cCCCceEEEEeeceEEeCCCCc-cc--------chH-HHH--HHHhCCCCCCCC
Q 017977          193 KVYCLVSFNRGVLVCREWEGTALK--VNKDVRLALIRIGIVLGKDGGA-LA--------KMI-PLF--MMFAGGPLGSGQ  258 (363)
Q Consensus       193 ~~~~~~~y~~~k~~~~~~~~~~~~--~~~~~~~~ilRp~~v~g~~~~~-~~--------~~~-~~~--~~~~~~~~~~~~  258 (363)
                      +          |............  ...+++++++||+.++++.... ..        ... ...  ....+.+     
T Consensus       173 s----------K~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  237 (274)
T 1ja9_A          173 S----------KAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNP-----  237 (274)
T ss_dssp             H----------HHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTST-----
T ss_pred             H----------HHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhcCC-----
Confidence            4          3222222221111  1238999999999998763210 00        000 111  1112222     


Q ss_pred             CccccccHHHHHHHHHHHhcCCC---CCceEEeeCCC
Q 017977          259 QWFSWIHLDDIVNLIYEALSNPS---YRGVINGTAPN  292 (363)
Q Consensus       259 ~~~~~i~v~D~a~a~~~~~~~~~---~~g~~~i~~~~  292 (363)
                       ...+++++|+|++++.++..+.   .+.+|++.+|.
T Consensus       238 -~~~~~~~~dva~~i~~l~~~~~~~~~G~~~~v~gG~  273 (274)
T 1ja9_A          238 -LKRIGYPADIGRAVSALCQEESEWINGQVIKLTGGG  273 (274)
T ss_dssp             -TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             -CCCccCHHHHHHHHHHHhCcccccccCcEEEecCCc
Confidence             2358999999999999997543   34489988763

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.85  E-value=3e-20  Score=160.26  Aligned_cols=223  Identities=17%  Similarity=0.024  Sum_probs=135.3

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc-------CCCEEE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV  121 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~Vi  121 (363)
                      .+++++||||+|+||+++++.|+++|++|++++|+.....    . . .....+|+.|.+++.++++       ++|+||
T Consensus         6 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~----~-~-~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv   79 (250)
T 2fwm_X            6 SGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQ----Y-P-FATEVMDVADAAQVAQVCQRLLAETERLDALV   79 (250)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCSSC----C-S-SEEEECCTTCHHHHHHHHHHHHHHCSCCCEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhhhc----C-C-ceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            3478999999999999999999999999999999875311    1 1 2244679999988887775       789999


Q ss_pred             EccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhhhhh
Q 017977          122 NLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYC  196 (363)
Q Consensus       122 ~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~  196 (363)
                      |+||.....   ..+.+..+..+++|+.++.++++++.+.  ..+..++|++||.++..+       .+....|..+|.+
T Consensus        80 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~-------~~~~~~Y~~sK~a  152 (250)
T 2fwm_X           80 NAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTP-------RIGMSAYGASKAA  152 (250)
T ss_dssp             ECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSC-------CTTCHHHHHHHHH
T ss_pred             ECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCC-------CCCCchHHHHHHH
Confidence            999974332   2355677889999999999999888321  145678999999843211       2233445555433


Q ss_pred             cccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc---cchHH-HHHHHhCCCCCCCCCccccccHHHHHHH
Q 017977          197 LVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL---AKMIP-LFMMFAGGPLGSGQQWFSWIHLDDIVNL  272 (363)
Q Consensus       197 ~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~i~v~D~a~a  272 (363)
                      ...+.++       ....+. ..|+++++++|+.+.++.....   ..... .+.... ...........+.+++|+|++
T Consensus       153 ~~~~~~~-------la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~p~dvA~~  223 (250)
T 2fwm_X          153 LKSLALS-------VGLELA-GSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFG-EQFKLGIPLGKIARPQEIANT  223 (250)
T ss_dssp             HHHHHHH-------HHHHHG-GGTCEEEEEEECCC-------------------------------------CHHHHHHH
T ss_pred             HHHHHHH-------HHHHhC-ccCCEEEEEECCcccCccccccccChhHHHHHHhhhh-hcccccCCCCCCcCHHHHHHH
Confidence            2222211       111111 2389999999999998753211   00000 000000 000001111247899999999


Q ss_pred             HHHHhcCCC--CCc-eEEeeCCCC
Q 017977          273 IYEALSNPS--YRG-VINGTAPNP  293 (363)
Q Consensus       273 ~~~~~~~~~--~~g-~~~i~~~~~  293 (363)
                      ++.++..+.  ..| .+++.+|..
T Consensus       224 v~~l~s~~~~~~tG~~i~vdGG~~  247 (250)
T 2fwm_X          224 ILFLASDLASHITLQDIVVDGGST  247 (250)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             HHHHhCccccCCCCCEEEECCCcc
Confidence            999997643  344 788877643

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.85  E-value=4.9e-21  Score=165.01  Aligned_cols=224  Identities=13%  Similarity=0.047  Sum_probs=148.0

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCC----CCCccccCcccccCcchHHhhcc-------CC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (363)
                      ++++++||||+|+||++++++|+++|++|++++|+....+....    .........+|+.|.+++.++++       ++
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (247)
T 3lyl_A            4 NEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLAI   83 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            45799999999999999999999999999999998765433211    11122245689999888877664       57


Q ss_pred             CEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhh
Q 017977          118 TAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCA  192 (363)
Q Consensus       118 d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~  192 (363)
                      |+|||+||.....   ..+.+..+..+++|+.++.++++++.+.  ..+..++|++||..+..+       .+....|..
T Consensus        84 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-------~~~~~~Y~~  156 (247)
T 3lyl_A           84 DILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAG-------NPGQTNYCA  156 (247)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC-------CTTCHHHHH
T ss_pred             CEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccC-------CCCcHHHHH
Confidence            9999999975332   3356677889999999999998887542  134457999999854332       233345555


Q ss_pred             hhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHH
Q 017977          193 KVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL  272 (363)
Q Consensus       193 ~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a  272 (363)
                      +|.+...+.+      . ....+. ..|+++.+++||.+.++.......-... ......+      ...+.+++|+|++
T Consensus       157 sK~a~~~~~~------~-la~e~~-~~gi~v~~v~PG~v~t~~~~~~~~~~~~-~~~~~~~------~~~~~~~~dva~~  221 (247)
T 3lyl_A          157 AKAGVIGFSK------S-LAYEVA-SRNITVNVVAPGFIATDMTDKLTDEQKS-FIATKIP------SGQIGEPKDIAAA  221 (247)
T ss_dssp             HHHHHHHHHH------H-HHHHHG-GGTEEEEEEEECSBCCTTTTTSCHHHHH-HHHTTST------TCCCBCHHHHHHH
T ss_pred             HHHHHHHHHH------H-HHHHHH-HcCeEEEEEeeCcEecccchhccHHHHH-HHhhcCC------CCCCcCHHHHHHH
Confidence            5433222221      1 111111 2389999999999988754332111111 1112222      2357899999999


Q ss_pred             HHHHhcCCC--C-CceEEeeCCCCc
Q 017977          273 IYEALSNPS--Y-RGVINGTAPNPV  294 (363)
Q Consensus       273 ~~~~~~~~~--~-~g~~~i~~~~~~  294 (363)
                      ++.++....  . +..+++.+|..+
T Consensus       222 i~~l~s~~~~~~tG~~i~vdgG~~~  246 (247)
T 3lyl_A          222 VAFLASEEAKYITGQTLHVNGGMYM  246 (247)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTSSC
T ss_pred             HHHHhCCCcCCccCCEEEECCCEec
Confidence            999986543  3 448888887543

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.85  E-value=2.3e-20  Score=160.45  Aligned_cols=219  Identities=16%  Similarity=0.119  Sum_probs=145.8

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc-------CCCEEE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV  121 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~Vi  121 (363)
                      .+++++||||+|+||++++++|+++|++|++++|+..+......... .....+|+.|.+++.++++       ++|+||
T Consensus         4 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv   82 (245)
T 1uls_A            4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVG-AHPVVMDVADPASVERGFAEALAHLGRLDGVV   82 (245)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTT-CEEEECCTTCHHHHHHHHHHHHHHHSSCCEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC-CEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            34689999999999999999999999999999998765443322111 2245689999988877665       489999


Q ss_pred             EccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhhhhh
Q 017977          122 NLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYC  196 (363)
Q Consensus       122 ~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~  196 (363)
                      |+||.....   ....+..+..+++|+.++.++++++.+.  ..+..++|++||.+ .++       .+....|..+|.+
T Consensus        83 n~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~-~~~-------~~~~~~Y~asK~a  154 (245)
T 1uls_A           83 HYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-YLG-------NLGQANYAASMAG  154 (245)
T ss_dssp             ECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-GGC-------CTTCHHHHHHHHH
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch-hcC-------CCCchhHHHHHHH
Confidence            999974332   2345667889999999999998888653  23567899999984 443       2233456555433


Q ss_pred             cccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCccc-chHHHHHHHhCCCCCCCCCccccccHHHHHHHHHH
Q 017977          197 LVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALA-KMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE  275 (363)
Q Consensus       197 ~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~  275 (363)
                      ...+.++       ....+. ..|+++++++||.+.++...... ....  ......+.+      .+.+++|+|++++.
T Consensus       155 ~~~~~~~-------la~e~~-~~gi~v~~v~PG~v~t~~~~~~~~~~~~--~~~~~~p~~------~~~~~~dvA~~v~~  218 (245)
T 1uls_A          155 VVGLTRT-------LALELG-RWGIRVNTLAPGFIETRMTAKVPEKVRE--KAIAATPLG------RAGKPLEVAYAALF  218 (245)
T ss_dssp             HHHHHHH-------HHHHHG-GGTEEEEEEEECSBCCTTTSSSCHHHHH--HHHHTCTTC------SCBCHHHHHHHHHH
T ss_pred             HHHHHHH-------HHHHHh-HhCeEEEEEEeCcCcCcchhhcCHHHHH--HHHhhCCCC------CCcCHHHHHHHHHH
Confidence            3222211       111111 23899999999999877432211 1111  111222221      37899999999999


Q ss_pred             HhcCCC--CCc-eEEeeCCC
Q 017977          276 ALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       276 ~~~~~~--~~g-~~~i~~~~  292 (363)
                      ++....  ..| .+.+.+|.
T Consensus       219 l~s~~~~~~tG~~~~vdgG~  238 (245)
T 1uls_A          219 LLSDESSFITGQVLFVDGGR  238 (245)
T ss_dssp             HHSGGGTTCCSCEEEESTTT
T ss_pred             HhCchhcCCcCCEEEECCCc
Confidence            987543  344 77777764

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.85  E-value=1.1e-20  Score=164.22  Aligned_cols=210  Identities=13%  Similarity=0.137  Sum_probs=140.7

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc-------CCCEEE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV  121 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~Vi  121 (363)
                      ++++|+||||+|+||+++++.|+++|++|++++|+.+..+.....  ......+|+.|.+++.++++       ++|+||
T Consensus        15 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv   92 (266)
T 3p19_A           15 MKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNLP--NTLCAQVDVTDKYTFDTAITRAEKIYGPADAIV   92 (266)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTCCT--TEEEEECCTTCHHHHHHHHHHHHHHHCSEEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhhcC--CceEEEecCCCHHHHHHHHHHHHHHCCCCCEEE
Confidence            346899999999999999999999999999999987665443322  12245689999988887765       789999


Q ss_pred             EccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhhhhh
Q 017977          122 NLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYC  196 (363)
Q Consensus       122 ~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~  196 (363)
                      |+||.....   ....+..+..+++|+.++.++++++.+.  ..+..++|++||..+..+       .+....|..+|.+
T Consensus        93 nnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~-------~~~~~~Y~asK~a  165 (266)
T 3p19_A           93 NNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKT-------FPDHAAYCGTKFA  165 (266)
T ss_dssp             ECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSC-------CTTCHHHHHHHHH
T ss_pred             ECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCC-------CCCCchHHHHHHH
Confidence            999975332   2345667788999999999977776521  145678999999854222       2333456655433


Q ss_pred             cccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCccc--chHHHHHHHhCCCCCCCCCccccccHHHHHHHHH
Q 017977          197 LVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALA--KMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY  274 (363)
Q Consensus       197 ~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~  274 (363)
                      ...+.++       ....+. ..|+++++++||.+.++......  .....+... ..++      ..+++++|+|++++
T Consensus       166 ~~~~~~~-------la~e~~-~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~-~~~~------~r~~~pedvA~av~  230 (266)
T 3p19_A          166 VHAISEN-------VREEVA-ASNVRVMTIAPSAVKTELLSHTTSQQIKDGYDAW-RVDM------GGVLAADDVARAVL  230 (266)
T ss_dssp             HHHHHHH-------HHHHHG-GGTCEEEEEEECSBSSSGGGGCSCHHHHHHHHHH-HHHT------TCCBCHHHHHHHHH
T ss_pred             HHHHHHH-------HHHHhc-ccCcEEEEEeeCccccchhhcccchhhhHHHHhh-cccc------cCCCCHHHHHHHHH
Confidence            3322211       111111 23899999999999887432111  111111100 0011      23789999999999


Q ss_pred             HHhcCCCC
Q 017977          275 EALSNPSY  282 (363)
Q Consensus       275 ~~~~~~~~  282 (363)
                      .+++++..
T Consensus       231 ~l~~~~~~  238 (266)
T 3p19_A          231 FAYQQPQN  238 (266)
T ss_dssp             HHHHSCTT
T ss_pred             HHHcCCCC
Confidence            99988763

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.85  E-value=9.6e-21  Score=164.07  Aligned_cols=224  Identities=13%  Similarity=0.039  Sum_probs=145.8

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEE-eCCCCccccc----CCCCCccccCcccccCcchHHhhcc-------C
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVL-TRSRSKAELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (363)
                      ++++||||||+|+||++++++|+++|++|+++ .|+.......    ...........+|+.|.+++.++++       +
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGR   82 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            34689999999999999999999999999997 7766443221    1112222345689999988877765       5


Q ss_pred             CCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchh
Q 017977          117 STAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYC  191 (363)
Q Consensus       117 ~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~  191 (363)
                      +|+|||+||.....   ..+.+..+..+++|+.++.++++++.+.  ..+..++|++||.++..+       .+....|.
T Consensus        83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~-------~~~~~~Y~  155 (258)
T 3oid_A           83 LDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRY-------LENYTTVG  155 (258)
T ss_dssp             CCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSB-------CTTCHHHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCC-------CCCcHHHH
Confidence            69999999964332   3455667889999999999998888542  145568999999843221       22334555


Q ss_pred             hhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHH-HHHhCCCCCCCCCccccccHHHHH
Q 017977          192 AKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIV  270 (363)
Q Consensus       192 ~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a  270 (363)
                      .+|.+...+.++       ....+. ..|+++.+++||.+.++............ ......++      ..+.+++|+|
T Consensus       156 asKaa~~~l~~~-------la~e~~-~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------~r~~~~~dva  221 (258)
T 3oid_A          156 VSKAALEALTRY-------LAVELS-PKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQNTPA------GRMVEIKDMV  221 (258)
T ss_dssp             HHHHHHHHHHHH-------HHHHTG-GGTEEEEEEEECCBCSGGGGGCTTHHHHHHHHHHHCTT------SSCBCHHHHH
T ss_pred             HHHHHHHHHHHH-------HHHHHh-hcCcEEEEEeeCCCcChhhhhcccCHHHHHHHHhcCCC------CCCcCHHHHH
Confidence            554332222210       111111 23899999999999877432211111111 11222222      2478899999


Q ss_pred             HHHHHHhcCCC--CCc-eEEeeCCCC
Q 017977          271 NLIYEALSNPS--YRG-VINGTAPNP  293 (363)
Q Consensus       271 ~a~~~~~~~~~--~~g-~~~i~~~~~  293 (363)
                      ++++.++....  ..| ++++.+|..
T Consensus       222 ~~v~~L~s~~~~~itG~~i~vdGG~~  247 (258)
T 3oid_A          222 DTVEFLVSSKADMIRGQTIIVDGGRS  247 (258)
T ss_dssp             HHHHHHTSSTTTTCCSCEEEESTTGG
T ss_pred             HHHHHHhCcccCCccCCEEEECCCcc
Confidence            99999997654  344 888888754

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.85  E-value=9.3e-21  Score=164.50  Aligned_cols=223  Identities=12%  Similarity=0.034  Sum_probs=144.8

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCC----CCCccccCcccccCcchHHhhc--------cC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCI--------QG  116 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~--------~~  116 (363)
                      .+++|+||||+|+||++++++|+++|++|++++|+.+..+....    .........+|+.|.+++.+++        .+
T Consensus         8 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   87 (260)
T 2ae2_A            8 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGK   87 (260)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            45789999999999999999999999999999998755332211    1111224467999988887776        46


Q ss_pred             CCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchh
Q 017977          117 STAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYC  191 (363)
Q Consensus       117 ~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~  191 (363)
                      +|+|||+||.....   ....+..+..+++|+.++.++++++.+.  ..+..++|++||..+..+       .+....|.
T Consensus        88 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------~~~~~~Y~  160 (260)
T 2ae2_A           88 LNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALA-------VPYEAVYG  160 (260)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSC-------CTTCHHHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccC-------CCCcchHH
Confidence            89999999974321   2355667889999999999999888531  145678999999843221       22233455


Q ss_pred             hhhhhcccchhhHHHHHHHHHHHhc--cCCCceEEEEeeceEEeCCCCcc---cchHHHH-HHHhCCCCCCCCCcccccc
Q 017977          192 AKVYCLVSFNRGVLVCREWEGTALK--VNKDVRLALIRIGIVLGKDGGAL---AKMIPLF-MMFAGGPLGSGQQWFSWIH  265 (363)
Q Consensus       192 ~~~~~~~~y~~~k~~~~~~~~~~~~--~~~~~~~~ilRp~~v~g~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~i~  265 (363)
                      .+|.+          ...+......  ...|+++++++|+.+.++.....   ......+ ......++      ..+++
T Consensus       161 ~sK~a----------~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~  224 (260)
T 2ae2_A          161 ATKGA----------MDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCAL------RRMGE  224 (260)
T ss_dssp             HHHHH----------HHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTT------CSCBC
T ss_pred             HHHHH----------HHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcCCC------CCCCC
Confidence            54332          2222221111  12389999999999987631100   0011101 11122222      24789


Q ss_pred             HHHHHHHHHHHhcCCC--CCc-eEEeeCCCCc
Q 017977          266 LDDIVNLIYEALSNPS--YRG-VINGTAPNPV  294 (363)
Q Consensus       266 v~D~a~a~~~~~~~~~--~~g-~~~i~~~~~~  294 (363)
                      ++|+|++++.++....  ..| .+++.+|...
T Consensus       225 ~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~~  256 (260)
T 2ae2_A          225 PKELAAMVAFLCFPAASYVTGQIIYVDGGLMA  256 (260)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHHHHHcCccccCCCCCEEEECCCccc
Confidence            9999999999986532  334 8888877543

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.85  E-value=6.9e-21  Score=165.32  Aligned_cols=226  Identities=15%  Similarity=0.016  Sum_probs=141.3

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCC------CCccccCcccccCcchHHhhcc------C
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG------KKTRFFPGVMIAEEPQWRDCIQ------G  116 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~~~------~  116 (363)
                      .+++|+||||+|+||+++++.|+++|++|++++|+..+.......      ........+|+.|.+++.++++      +
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (260)
T 2z1n_A            6 QGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLGG   85 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            346899999999999999999999999999999987543322110      1012244579999998888776      5


Q ss_pred             CCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchh
Q 017977          117 STAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYC  191 (363)
Q Consensus       117 ~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~  191 (363)
                      +|+|||+||.....   ....+..+..+++|+.++.++.+++.+.  ..+..++|++||..+..+       .+....|.
T Consensus        86 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------~~~~~~Y~  158 (260)
T 2z1n_A           86 ADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRP-------WQDLALSN  158 (260)
T ss_dssp             CSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-------CTTBHHHH
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCC-------CCCCchhH
Confidence            99999999964332   2355677889999999997766665431  145678999999843221       22333555


Q ss_pred             hhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCccc-------chHHHHHHHhCCCCCCCCCccccc
Q 017977          192 AKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALA-------KMIPLFMMFAGGPLGSGQQWFSWI  264 (363)
Q Consensus       192 ~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~i  264 (363)
                      .+|.+...+.+      . ....+. ..|+++++++|+.++++......       ......   ....+........+.
T Consensus       159 ~sK~a~~~~~~------~-la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~p~~r~~  227 (260)
T 2z1n_A          159 IMRLPVIGVVR------T-LALELA-PHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEE---ALKSMASRIPMGRVG  227 (260)
T ss_dssp             HHTHHHHHHHH------H-HHHHHG-GGTEEEEEEEECHHHHCCCC--------------------------CCTTSSCC
T ss_pred             HHHHHHHHHHH------H-HHHHHh-hhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHH---HHHHHHhcCCCCCcc
Confidence            55433222221      1 111111 23899999999999987533100       000000   000010111112478


Q ss_pred             cHHHHHHHHHHHhcCCC--CCc-eEEeeCCC
Q 017977          265 HLDDIVNLIYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       265 ~v~D~a~a~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      +++|+|++++.++....  ..| .+++.+|.
T Consensus       228 ~~~dva~~v~~l~s~~~~~~tG~~i~vdGG~  258 (260)
T 2z1n_A          228 KPEELASVVAFLASEKASFITGAVIPVDGGA  258 (260)
T ss_dssp             CHHHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred             CHHHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence            99999999999987532  344 77777763

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.85  E-value=4.4e-21  Score=167.81  Aligned_cols=223  Identities=13%  Similarity=0.036  Sum_probs=146.1

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCC-CCccccCcccccCcchHHhhcc-------CCCE
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTA  119 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~d~  119 (363)
                      ..+++|+||||+|+||+++++.|+++|++|++++|+.......... ........+|+.|.+++.++++       ++|+
T Consensus        27 l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  106 (277)
T 3gvc_A           27 LAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDK  106 (277)
T ss_dssp             CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            3457899999999999999999999999999999987654332111 1112245689999988877665       6899


Q ss_pred             EEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhhh
Q 017977          120 VVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKV  194 (363)
Q Consensus       120 Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~  194 (363)
                      |||+||.....   ..+.+..+..+++|+.++.++++++.+.  ..+..++|++||..+..+       .+....|..+|
T Consensus       107 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~-------~~~~~~Y~asK  179 (277)
T 3gvc_A          107 LVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVA-------VGGTGAYGMSK  179 (277)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSC-------CTTBHHHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccC-------CCCchhHHHHH
Confidence            99999975432   3456677889999999999888887642  134567999999854322       23334555554


Q ss_pred             hhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc---------cchHHHHHHHhCCCCCCCCCcccccc
Q 017977          195 YCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL---------AKMIPLFMMFAGGPLGSGQQWFSWIH  265 (363)
Q Consensus       195 ~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~i~  265 (363)
                      .+...+.++       ....+. ..|+++++++||.+.++.....         ........   .      .....+.+
T Consensus       180 aa~~~l~~~-------la~e~~-~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~---~------~~~~r~~~  242 (277)
T 3gvc_A          180 AGIIQLSRI-------TAAELR-SSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMI---A------RLQGRMAA  242 (277)
T ss_dssp             HHHHHHHHH-------HHHHHG-GGTEEEEEEEECSBCCHHHHHHHTCC------CCHHHHH---H------HHHSSCBC
T ss_pred             HHHHHHHHH-------HHHHhc-ccCeEEEEEeeCCccCchHHHhhhcchhhHHHHhhhhhh---h------ccccCCCC
Confidence            332222211       111111 2389999999999987631100         00000000   0      01124788


Q ss_pred             HHHHHHHHHHHhcCCC--CCc-eEEeeCCCCc
Q 017977          266 LDDIVNLIYEALSNPS--YRG-VINGTAPNPV  294 (363)
Q Consensus       266 v~D~a~a~~~~~~~~~--~~g-~~~i~~~~~~  294 (363)
                      ++|+|++++.++....  ..| ++++.+|...
T Consensus       243 pedvA~~v~~L~s~~a~~itG~~i~vdGG~~~  274 (277)
T 3gvc_A          243 PEEMAGIVVFLLSDDASMITGTTQIADGGTIA  274 (277)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHHHHHcCCccCCccCcEEEECCcchh
Confidence            9999999999997543  344 8888887543

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.85  E-value=1.3e-20  Score=162.13  Aligned_cols=220  Identities=10%  Similarity=-0.039  Sum_probs=143.1

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhc---cCCCEEEEccC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI---QGSTAVVNLAG  125 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~---~~~d~Vi~~a~  125 (363)
                      .+++|+||||+|+||++++++|+++|++|++++|+..+..... .........+|+.|.+++++++   .++|+|||+||
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~id~lv~~Ag   83 (246)
T 2ag5_A            5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAG   83 (246)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hccCceEEEeeCCCHHHHHHHHHHhCCCCEEEECCc
Confidence            3478999999999999999999999999999999876554433 1111224467999988887654   47899999999


Q ss_pred             CCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccC-CCcchhhhhhhccc
Q 017977          126 TPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMIT-WLSDYCAKVYCLVS  199 (363)
Q Consensus       126 ~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~-~~~~~~~~~~~~~~  199 (363)
                      .....   ....+..+..+++|+.++.++++++.+.  ..+..++|++||.++..+       .+ ....|..+|.+   
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------~~~~~~~Y~~sK~a---  153 (246)
T 2ag5_A           84 FVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVK-------GVVNRCVYSTTKAA---  153 (246)
T ss_dssp             CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTB-------CCTTBHHHHHHHHH---
T ss_pred             cCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcC-------CCCCCccHHHHHHH---
Confidence            75332   2345667889999999999999887632  135678999999843211       12 22345544322   


Q ss_pred             chhhHHHHHHHHHHHh-c-cCCCceEEEEeeceEEeCCCCc-cc---chHHHH-HHHhCCCCCCCCCccccccHHHHHHH
Q 017977          200 FNRGVLVCREWEGTAL-K-VNKDVRLALIRIGIVLGKDGGA-LA---KMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNL  272 (363)
Q Consensus       200 y~~~k~~~~~~~~~~~-~-~~~~~~~~ilRp~~v~g~~~~~-~~---~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~a  272 (363)
                             ...+..... + ...|++++++||+.++++.... ..   ...... ......+.      ..+.+++|+|++
T Consensus       154 -------~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~dvA~~  220 (246)
T 2ag5_A          154 -------VIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKT------GRFATAEEIAML  220 (246)
T ss_dssp             -------HHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTT------SSCEEHHHHHHH
T ss_pred             -------HHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcCCC------CCCCCHHHHHHH
Confidence                   222211111 1 1238999999999999874211 00   000111 11122222      237899999999


Q ss_pred             HHHHhcCCC--CCc-eEEeeCCC
Q 017977          273 IYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       273 ~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      ++.++....  ..| .+++.+|.
T Consensus       221 v~~l~s~~~~~~tG~~i~vdgG~  243 (246)
T 2ag5_A          221 CVYLASDESAYVTGNPVIIDGGW  243 (246)
T ss_dssp             HHHHHSGGGTTCCSCEEEECTTG
T ss_pred             HHHHhCccccCCCCCEEEECCCc
Confidence            999986543  344 77777763

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.85  E-value=3.6e-21  Score=167.18  Aligned_cols=227  Identities=14%  Similarity=0.022  Sum_probs=146.0

Q ss_pred             CccEEEEecCc--chHHHHHHHHHHhCCCEEEEEeCCCC---cccccCCCCCccccCcccccCcchHHhhcc-------C
Q 017977           49 SQMTVSVTGAT--GFIGRRLVQRLQADNHQVRVLTRSRS---KAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (363)
Q Consensus        49 ~~~~vlVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~---~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (363)
                      .+++|+||||+  |+||+++++.|+++|++|++++|+..   ....+...........+|+.|.+++.++++       +
T Consensus         7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   86 (261)
T 2wyu_A            7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGG   86 (261)
T ss_dssp             TTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            34689999999  99999999999999999999999874   111111100112245689999988887765       6


Q ss_pred             CCEEEEccCCCCC-------CCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcc
Q 017977          117 STAVVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSD  189 (363)
Q Consensus       117 ~d~Vi~~a~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~  189 (363)
                      +|+|||+||....       ...+.+..+..+++|+.++.++++++.+......++|++||.++..+       .+....
T Consensus        87 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~-------~~~~~~  159 (261)
T 2wyu_A           87 LDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKV-------VPKYNV  159 (261)
T ss_dssp             EEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSB-------CTTCHH
T ss_pred             CCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCC-------CCCchH
Confidence            8999999997431       13456677889999999999999999873111247999999743221       222334


Q ss_pred             hhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHH-HHHhCCCCCCCCCccccccHHH
Q 017977          190 YCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDD  268 (363)
Q Consensus       190 ~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D  268 (363)
                      |..+|.+...+.++       ....+. ..|+++++++|+.++++............ ......++      ..+.+++|
T Consensus       160 Y~asK~a~~~~~~~-------la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~------~~~~~~~d  225 (261)
T 2wyu_A          160 MAIAKAALEASVRY-------LAYELG-PKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPL------RRNITQEE  225 (261)
T ss_dssp             HHHHHHHHHHHHHH-------HHHHHG-GGTCEEEEEEECCCCCTGGGGCTTHHHHHHHHHHHSTT------SSCCCHHH
T ss_pred             HHHHHHHHHHHHHH-------HHHHHh-hhCcEEEEEeeCCCcCchhhhccccHHHHHHHHhcCCC------CCCCCHHH
Confidence            55554332222211       111111 23899999999999987532211111111 11112222      23678999


Q ss_pred             HHHHHHHHhcCCC---CCceEEeeCCCCcCH
Q 017977          269 IVNLIYEALSNPS---YRGVINGTAPNPVRL  296 (363)
Q Consensus       269 ~a~a~~~~~~~~~---~~g~~~i~~~~~~s~  296 (363)
                      +|++++.++....   .+..+++.++..++.
T Consensus       226 va~~v~~l~s~~~~~~tG~~~~vdgG~~~~~  256 (261)
T 2wyu_A          226 VGNLGLFLLSPLASGITGEVVYVDAGYHIMG  256 (261)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTGGGBC
T ss_pred             HHHHHHHHcChhhcCCCCCEEEECCCccccC
Confidence            9999999986533   234888888755443

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.85  E-value=9.4e-21  Score=166.24  Aligned_cols=227  Identities=10%  Similarity=0.027  Sum_probs=148.1

Q ss_pred             CCCCccEEEEecCcch--HHHHHHHHHHhCCCEEEEEeCCC--CcccccCCCCCccccCcccccCcchHHhhcc------
Q 017977           46 QKASQMTVSVTGATGF--IGRRLVQRLQADNHQVRVLTRSR--SKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ------  115 (363)
Q Consensus        46 ~~~~~~~vlVtGatG~--iG~~l~~~L~~~g~~V~~~~r~~--~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~------  115 (363)
                      ....+++|+||||+|+  ||+++++.|+++|++|++++|+.  .....+...........+|+.|.+++.++++      
T Consensus        22 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  101 (280)
T 3nrc_A           22 GFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVW  101 (280)
T ss_dssp             CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             cccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHc
Confidence            3445579999999977  99999999999999999999987  2222221111112355689999988877664      


Q ss_pred             -CCCEEEEccCCCCCC-------C-CChhhHHHHHHHHHHHHHHHHHHHHhC-CCCCCCeEEEeccceecCCcccccccC
Q 017977          116 -GSTAVVNLAGTPIGT-------R-WSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLELVKPKYLMRAAHQEMIT  185 (363)
Q Consensus       116 -~~d~Vi~~a~~~~~~-------~-~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~SS~~~~yg~~~~~e~~~  185 (363)
                       .+|+|||+||.....       . ...+..+..+++|+.++.++++++... .....++|++||.++..+       .+
T Consensus       102 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~-------~~  174 (280)
T 3nrc_A          102 DGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKA-------MP  174 (280)
T ss_dssp             SSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTSC-------CT
T ss_pred             CCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccccC-------CC
Confidence             579999999975321       0 456677889999999999999998764 224567999999844222       22


Q ss_pred             CCcchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHH-HHHhCCCCCCCCCccccc
Q 017977          186 WLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWI  264 (363)
Q Consensus       186 ~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i  264 (363)
                      ....|..+|.+...|.++       ....+. ..|+.+.+++||.+.++............ ......++      ..+.
T Consensus       175 ~~~~Y~asKaal~~~~~~-------la~e~~-~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------~~~~  240 (280)
T 3nrc_A          175 SYNTMGVAKASLEATVRY-------TALALG-EDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPL------KKNV  240 (280)
T ss_dssp             TTHHHHHHHHHHHHHHHH-------HHHHHG-GGTCEEEEEEECCCCCSGGGGCTTHHHHHHHHHHHSTT------CSCC
T ss_pred             CchhhHHHHHHHHHHHHH-------HHHHHH-HcCcEEEEEeeccccchhhhcCcchHHHHHHHHhcCCC------CCCC
Confidence            334555554333222211       111111 23899999999999987533221111111 11111222      2367


Q ss_pred             cHHHHHHHHHHHhcCCC--CCc-eEEeeCCCC
Q 017977          265 HLDDIVNLIYEALSNPS--YRG-VINGTAPNP  293 (363)
Q Consensus       265 ~v~D~a~a~~~~~~~~~--~~g-~~~i~~~~~  293 (363)
                      .++|+|++++.++....  ..| ++++.+|..
T Consensus       241 ~pedvA~~v~~l~s~~~~~~tG~~i~vdgG~~  272 (280)
T 3nrc_A          241 DIMEVGNTVAFLCSDMATGITGEVVHVDAGYH  272 (280)
T ss_dssp             CHHHHHHHHHHTTSGGGTTCCSCEEEESTTGG
T ss_pred             CHHHHHHHHHHHhCcccCCcCCcEEEECCCcc
Confidence            89999999999987543  344 888887753

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.85  E-value=6.7e-21  Score=167.85  Aligned_cols=224  Identities=19%  Similarity=0.107  Sum_probs=148.1

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCccccc----CCCC-CccccCcccccCcchHHhhcc-------
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI----FPGK-KTRFFPGVMIAEEPQWRDCIQ-------  115 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~-~~~~~~~~d~~~~~~~~~~~~-------  115 (363)
                      ..+++||||||+|+||+++++.|+++|++|++++|+..+....    .... .......+|+.|.+++.++++       
T Consensus        39 l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  118 (293)
T 3rih_A           39 LSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFG  118 (293)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence            3457999999999999999999999999999999998664432    1111 122245689999988776654       


Q ss_pred             CCCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEecccee-cCCcccccccCCCcc
Q 017977          116 GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKY-LMRAAHQEMITWLSD  189 (363)
Q Consensus       116 ~~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~-yg~~~~~e~~~~~~~  189 (363)
                      ++|+|||+||.....   ..+.+..+..+++|+.++.++++++.+.  ..+..++|++||..+. ++       .+....
T Consensus       119 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~-------~~~~~~  191 (293)
T 3rih_A          119 ALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTG-------YPGWSH  191 (293)
T ss_dssp             CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBB-------CTTCHH
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCC-------CCCCHH
Confidence            679999999975332   3356677889999999999999988421  0456789999998431 22       223345


Q ss_pred             hhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc-cchHHHHHHHhCCCCCCCCCccccccHHH
Q 017977          190 YCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAGGPLGSGQQWFSWIHLDD  268 (363)
Q Consensus       190 ~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  268 (363)
                      |..+|.+...+.++       ....+. ..|+++++++||.++++..... .....  ......+++      .+..++|
T Consensus       192 Y~asKaa~~~l~~~-------la~e~~-~~gI~vn~v~PG~v~t~~~~~~~~~~~~--~~~~~~p~~------r~~~p~d  255 (293)
T 3rih_A          192 YGASKAAQLGFMRT-------AAIELA-PRGVTVNAILPGNILTEGLVDMGEEYIS--GMARSIPMG------MLGSPVD  255 (293)
T ss_dssp             HHHHHHHHHHHHHH-------HHHHHG-GGTCEEEEEEECSBCCHHHHHTCHHHHH--HHHTTSTTS------SCBCHHH
T ss_pred             HHHHHHHHHHHHHH-------HHHHHh-hhCeEEEEEecCCCcCcchhhccHHHHH--HHHhcCCCC------CCCCHHH
Confidence            55554332222211       111111 2389999999999998742111 11111  122222322      3678999


Q ss_pred             HHHHHHHHhcCCC--CCc-eEEeeCCCCc
Q 017977          269 IVNLIYEALSNPS--YRG-VINGTAPNPV  294 (363)
Q Consensus       269 ~a~a~~~~~~~~~--~~g-~~~i~~~~~~  294 (363)
                      +|+++..++....  ..| ++++.+|..+
T Consensus       256 vA~~v~fL~s~~a~~itG~~i~vdGG~~~  284 (293)
T 3rih_A          256 IGHLAAFLATDEAGYITGQAIVVDGGQVL  284 (293)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred             HHHHHHHHhCccccCCCCCEEEECCCccC
Confidence            9999999986543  344 8888887544

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.85  E-value=2.9e-20  Score=162.83  Aligned_cols=229  Identities=15%  Similarity=0.062  Sum_probs=151.1

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCccccc----CCCCCccccCcccccCcchHHhhcc-------C
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (363)
                      ..+++||||||+|+||+++++.|+++|++|++++|+.......    ...........+|+.|.+++.++++       +
T Consensus         6 l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   85 (280)
T 3tox_A            6 LEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGG   85 (280)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            3457899999999999999999999999999999987653322    2222223355689999988887765       7


Q ss_pred             CCEEEEccCCCCC----CCCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcch
Q 017977          117 STAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDY  190 (363)
Q Consensus       117 ~d~Vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~  190 (363)
                      +|+|||+||....    ...+.+..+..+++|+.++.++++++.+.  ..+..++|++||..+ +.     ...+....|
T Consensus        86 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~-~~-----~~~~~~~~Y  159 (280)
T 3tox_A           86 LDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVG-HT-----AGFAGVAPY  159 (280)
T ss_dssp             CCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBT-TT-----BCCTTCHHH
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhh-Cc-----CCCCCchhH
Confidence            8999999996422    13456678889999999999998887653  134567999999833 21     112333456


Q ss_pred             hhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCc-ccchHH-HHH-HHhCCCCCCCCCccccccHH
Q 017977          191 CAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA-LAKMIP-LFM-MFAGGPLGSGQQWFSWIHLD  267 (363)
Q Consensus       191 ~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~-~~~~~~-~~~-~~~~~~~~~~~~~~~~i~v~  267 (363)
                      ..+|.+...+.++       ....+. ..|+++.+++||.+.++.... .....+ ... .....++      ..+.+++
T Consensus       160 ~asKaa~~~l~~~-------la~e~~-~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~------~r~~~pe  225 (280)
T 3tox_A          160 AASKAGLIGLVQA-------LAVELG-ARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHAL------KRIARPE  225 (280)
T ss_dssp             HHHHHHHHHHHHH-------HHHHHH-TTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTSTT------SSCBCHH
T ss_pred             HHHHHHHHHHHHH-------HHHHhh-hcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccCcc------CCCcCHH
Confidence            6554333322221       111111 248999999999999875322 100011 111 1122222      2478999


Q ss_pred             HHHHHHHHHhcCCC--CCc-eEEeeCCCCcCH
Q 017977          268 DIVNLIYEALSNPS--YRG-VINGTAPNPVRL  296 (363)
Q Consensus       268 D~a~a~~~~~~~~~--~~g-~~~i~~~~~~s~  296 (363)
                      |+|++++.++....  ..| ++++.+|..++.
T Consensus       226 dvA~~v~~L~s~~a~~itG~~i~vdGG~~~~~  257 (280)
T 3tox_A          226 EIAEAALYLASDGASFVTGAALLADGGASVTK  257 (280)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTGGGCC
T ss_pred             HHHHHHHHHhCccccCCcCcEEEECCCccccc
Confidence            99999999997643  344 889988865554

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.85  E-value=9.9e-21  Score=165.95  Aligned_cols=227  Identities=16%  Similarity=0.140  Sum_probs=137.9

Q ss_pred             CCCCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCc-ccc----cCCCCCccccCcccccCcchHHhhcc-----
Q 017977           46 QKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK-AEL----IFPGKKTRFFPGVMIAEEPQWRDCIQ-----  115 (363)
Q Consensus        46 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~----~~~~~~~~~~~~~d~~~~~~~~~~~~-----  115 (363)
                      ....+++++||||+|+||+++++.|+++|++|++++|+..+ .+.    +........+..+|+.|.+++.++++     
T Consensus        25 ~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  104 (280)
T 4da9_A           25 TQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAE  104 (280)
T ss_dssp             SCCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHH
T ss_pred             hccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            33455789999999999999999999999999999974432 221    11111122345689999998887775     


Q ss_pred             --CCCEEEEccCCCC--C---CCCChhhHHHHHHHHHHHHHHHHHHHHhC--CCC---CCCeEEEeccceecCCcccccc
Q 017977          116 --GSTAVVNLAGTPI--G---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEG---VRPSVLELVKPKYLMRAAHQEM  183 (363)
Q Consensus       116 --~~d~Vi~~a~~~~--~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~---~~~~v~~SS~~~~yg~~~~~e~  183 (363)
                        ++|+|||+||...  .   ...+.+..+..+++|+.++.++++++.+.  ..+   ..++|++||.++.++       
T Consensus       105 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~-------  177 (280)
T 4da9_A          105 FGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMT-------  177 (280)
T ss_dssp             HSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC------------
T ss_pred             cCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccC-------
Confidence              7899999999721  1   12356677889999999999888887653  012   457999999854333       


Q ss_pred             cCCCcchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCcccc
Q 017977          184 ITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSW  263 (363)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (363)
                      .+....|..+|.+...+.++       ....+. ..|+++..++||.+.++.......-.  ......    .......+
T Consensus       178 ~~~~~~Y~asKaa~~~l~~~-------la~e~~-~~gI~vn~v~PG~v~T~~~~~~~~~~--~~~~~~----~~~p~~r~  243 (280)
T 4da9_A          178 SPERLDYCMSKAGLAAFSQG-------LALRLA-ETGIAVFEVRPGIIRSDMTAAVSGKY--DGLIES----GLVPMRRW  243 (280)
T ss_dssp             --CCHHHHHHHHHHHHHHHH-------HHHHHT-TTTEEEEEEEECCBCC----------------------------CC
T ss_pred             CCCccHHHHHHHHHHHHHHH-------HHHHHH-HhCcEEEEEeecCCcCCchhhcchhH--HHHHhh----cCCCcCCc
Confidence            23334565554332222211       111111 24899999999999887432211000  000000    01112347


Q ss_pred             ccHHHHHHHHHHHhcCCC--CCc-eEEeeCCCC
Q 017977          264 IHLDDIVNLIYEALSNPS--YRG-VINGTAPNP  293 (363)
Q Consensus       264 i~v~D~a~a~~~~~~~~~--~~g-~~~i~~~~~  293 (363)
                      .+++|+|++++.++....  ..| ++++.+|..
T Consensus       244 ~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~  276 (280)
T 4da9_A          244 GEPEDIGNIVAGLAGGQFGFATGSVIQADGGLS  276 (280)
T ss_dssp             BCHHHHHHHHHHHHTSTTGGGTTCEEEESTTCC
T ss_pred             CCHHHHHHHHHHHhCccccCCCCCEEEECCCcc
Confidence            889999999999997655  344 888887743

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.85  E-value=1.4e-20  Score=164.03  Aligned_cols=221  Identities=15%  Similarity=0.117  Sum_probs=147.1

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCc-cccc----CCCCCccccCcccccCcchHHhhcc-------C
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK-AELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (363)
                      .+++|+||||+|+||+++++.|+++|++|++++|+... .+..    ...........+|+.|.+++.++++       +
T Consensus        27 ~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~  106 (269)
T 4dmm_A           27 TDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWGR  106 (269)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            45689999999999999999999999999999985432 2211    1111122245689999988887765       7


Q ss_pred             CCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchh
Q 017977          117 STAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYC  191 (363)
Q Consensus       117 ~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~  191 (363)
                      +|+|||+||.....   ..+.+..+..+++|+.++.++++++.+.  ..+..++|++||..+.++       .+....|.
T Consensus       107 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-------~~~~~~Y~  179 (269)
T 4dmm_A          107 LDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMG-------NPGQANYS  179 (269)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHC-------CTTCHHHH
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCC-------CCCchhHH
Confidence            89999999975432   2356677889999999999998887532  135567999999854333       23334555


Q ss_pred             hhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHH
Q 017977          192 AKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVN  271 (363)
Q Consensus       192 ~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  271 (363)
                      .+|.+...+.+      . ....+. ..|+++++++||.+.++.....   .. .......++      ..+.+++|+|+
T Consensus       180 asK~a~~~l~~------~-la~e~~-~~gi~vn~v~PG~v~T~~~~~~---~~-~~~~~~~p~------~r~~~~~dvA~  241 (269)
T 4dmm_A          180 AAKAGVIGLTK------T-VAKELA-SRGITVNAVAPGFIATDMTSEL---AA-EKLLEVIPL------GRYGEAAEVAG  241 (269)
T ss_dssp             HHHHHHHHHHH------H-HHHHHG-GGTCEEEEEEECCBTTSCSCHH---HH-HHHGGGCTT------SSCBCHHHHHH
T ss_pred             HHHHHHHHHHH------H-HHHHHh-hhCcEEEEEEECCCcCcccccc---cH-HHHHhcCCC------CCCCCHHHHHH
Confidence            55433322221      1 111111 2389999999999988754321   11 112222222      24788999999


Q ss_pred             HHHHHhcCCC---CCc-eEEeeCCCCc
Q 017977          272 LIYEALSNPS---YRG-VINGTAPNPV  294 (363)
Q Consensus       272 a~~~~~~~~~---~~g-~~~i~~~~~~  294 (363)
                      +++.++..+.   ..| ++++.+|..+
T Consensus       242 ~v~~l~s~~~~~~itG~~i~vdGG~~~  268 (269)
T 4dmm_A          242 VVRFLAADPAAAYITGQVINIDGGLVM  268 (269)
T ss_dssp             HHHHHHHCGGGGGCCSCEEEESTTSCC
T ss_pred             HHHHHhCCcccCCCcCCEEEECCCeec
Confidence            9999998732   334 8888887544

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.85  E-value=1.5e-21  Score=170.21  Aligned_cols=226  Identities=14%  Similarity=0.085  Sum_probs=148.7

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccC----CCCCccccCcccccCcchHHhhcc-------C
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (363)
                      ..++++|||||+|+||++++++|+++|++|++++|+........    ..........+|+.|.+++.++++       +
T Consensus        24 l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  103 (271)
T 4ibo_A           24 LGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGID  103 (271)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCC
Confidence            44579999999999999999999999999999999876543221    111222355689999998887775       6


Q ss_pred             CCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchh
Q 017977          117 STAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYC  191 (363)
Q Consensus       117 ~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~  191 (363)
                      +|+|||+||.....   ..+.+..+..+++|+.++.++++++.+.  ..+..++|++||..+.++       .+....|.
T Consensus       104 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~-------~~~~~~Y~  176 (271)
T 4ibo_A          104 VDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELA-------RATVAPYT  176 (271)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSB-------CTTCHHHH
T ss_pred             CCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCC-------CCCchhHH
Confidence            89999999975332   2356677889999999999997777652  134567999999854322       23334565


Q ss_pred             hhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHH-HHHhCCCCCCCCCccccccHHHHH
Q 017977          192 AKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIV  270 (363)
Q Consensus       192 ~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a  270 (363)
                      .+|.+...+.++       ....+. ..|+++..++||.+.++............ ......++      ..+..++|+|
T Consensus       177 asKaa~~~l~~~-------la~e~~-~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------~r~~~pedva  242 (271)
T 4ibo_A          177 VAKGGIKMLTRA-------MAAEWA-QYGIQANAIGPGYMLTDMNQALIDNPEFDAWVKARTPA------KRWGKPQELV  242 (271)
T ss_dssp             HHHHHHHHHHHH-------HHHHHG-GGTEEEEEEEECSBCSGGGHHHHHCHHHHHHHHHHSTT------CSCBCGGGGH
T ss_pred             HHHHHHHHHHHH-------HHHHHh-hhCeEEEEEEeccEeCcchhhcccCHHHHHHHHhcCCC------CCCcCHHHHH
Confidence            554333222211       111111 23899999999999887432110000111 11222222      2367899999


Q ss_pred             HHHHHHhcCCC--CCc-eEEeeCCCCc
Q 017977          271 NLIYEALSNPS--YRG-VINGTAPNPV  294 (363)
Q Consensus       271 ~a~~~~~~~~~--~~g-~~~i~~~~~~  294 (363)
                      ++++.++....  ..| ++++.+|...
T Consensus       243 ~~v~~L~s~~~~~itG~~i~vdGG~~~  269 (271)
T 4ibo_A          243 GTAVFLSASASDYVNGQIIYVDGGMLS  269 (271)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHhCccccCCCCcEEEECCCeec
Confidence            99999887543  344 8888887543

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.85  E-value=3.5e-21  Score=165.69  Aligned_cols=218  Identities=17%  Similarity=0.147  Sum_probs=139.4

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEE-eCCCCcccccCC----CCCcccc-CcccccCcchHHhhcc-------C
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVL-TRSRSKAELIFP----GKKTRFF-PGVMIAEEPQWRDCIQ-------G  116 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~----~~~~~~~-~~~d~~~~~~~~~~~~-------~  116 (363)
                      |++|+||||+|+||++++++|+++|++|+++ +|+..+......    ....... ..+|+.|.+++.++++       +
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGG   80 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCC
Confidence            3689999999999999999999999999998 787654332110    1111113 5679999888877654       7


Q ss_pred             CCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHH----HHHhCCCCCCCeEEEeccceecCCcccccccCCCcc
Q 017977          117 STAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVD----LINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSD  189 (363)
Q Consensus       117 ~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~----~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~  189 (363)
                      +|+|||+||.....   ....+..+..+++|+.++.++++    .+.+  .+.+++|++||..+.++       .+....
T Consensus        81 ~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~--~~~~~iv~~sS~~~~~~-------~~~~~~  151 (245)
T 2ph3_A           81 LDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMK--ARFGRIVNITSVVGILG-------NPGQAN  151 (245)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCEEEEEECCTHHHHC-------CSSBHH
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHh--cCCCEEEEEeChhhccC-------CCCCcc
Confidence            89999999975331   23456678899999999555554    4444  46678999999854443       222334


Q ss_pred             hhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc-cchHHHHHHHhCCCCCCCCCccccccHHH
Q 017977          190 YCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAGGPLGSGQQWFSWIHLDD  268 (363)
Q Consensus       190 ~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  268 (363)
                      |..+|.+...+.+      . ....+. ..+++++++||+.++++..... .....  ......+.      ..+++++|
T Consensus       152 Y~~sK~a~~~~~~------~-la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~--~~~~~~~~------~~~~~~~d  215 (245)
T 2ph3_A          152 YVASKAGLIGFTR------A-VAKEYA-QRGITVNAVAPGFIETEMTERLPQEVKE--AYLKQIPA------GRFGRPEE  215 (245)
T ss_dssp             HHHHHHHHHHHHH------H-HHHHHG-GGTEEEEEEEECSBCCHHHHTSCHHHHH--HHHHTCTT------CSCBCHHH
T ss_pred             hHHHHHHHHHHHH------H-HHHHHH-HcCeEEEEEEEEeecCcchhhcCHHHHH--HHHhcCCC------CCCcCHHH
Confidence            5554322211111      1 111111 2389999999999987632111 11111  11122221      34789999


Q ss_pred             HHHHHHHHhcCCC--C-CceEEeeCCC
Q 017977          269 IVNLIYEALSNPS--Y-RGVINGTAPN  292 (363)
Q Consensus       269 ~a~a~~~~~~~~~--~-~g~~~i~~~~  292 (363)
                      +|++++.++..+.  . +..|++.++.
T Consensus       216 va~~~~~l~~~~~~~~~G~~~~v~gg~  242 (245)
T 2ph3_A          216 VAEAVAFLVSEKAGYITGQTLCVDGGL  242 (245)
T ss_dssp             HHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHHHHhCcccccccCCEEEECCCC
Confidence            9999999987542  2 3488887764

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.85  E-value=2.2e-21  Score=169.08  Aligned_cols=225  Identities=13%  Similarity=0.049  Sum_probs=147.4

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCC----CCCccccCcccccCcchHHhhcc-------C
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (363)
                      ..++++|||||+|+||+++++.|+++|++|++++|+....+....    .........+|+.|.+++.++++       +
T Consensus        26 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  105 (270)
T 3ftp_A           26 LDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGA  105 (270)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence            445789999999999999999999999999999998755432211    11111244579999988877765       7


Q ss_pred             CCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchh
Q 017977          117 STAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYC  191 (363)
Q Consensus       117 ~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~  191 (363)
                      +|+|||+||.....   ....+..+..+++|+.++.++++++.+.  ..+..++|++||..+.++       .+....|.
T Consensus       106 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-------~~~~~~Y~  178 (270)
T 3ftp_A          106 LNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAG-------NPGQVNYA  178 (270)
T ss_dssp             CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC-------CTTBHHHH
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCC-------CCCchhHH
Confidence            89999999975432   3456677889999999999999988632  134457999999854333       23334565


Q ss_pred             hhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHH
Q 017977          192 AKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVN  271 (363)
Q Consensus       192 ~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  271 (363)
                      .+|.+...+.++       ....+. ..|+++++++||.+.++.......- .........++      ..+.+++|+|+
T Consensus       179 asKaa~~~l~~~-------la~e~~-~~gI~vn~v~PG~v~T~~~~~~~~~-~~~~~~~~~p~------~r~~~pedvA~  243 (270)
T 3ftp_A          179 AAKAGVAGMTRA-------LAREIG-SRGITVNCVAPGFIDTDMTKGLPQE-QQTALKTQIPL------GRLGSPEDIAH  243 (270)
T ss_dssp             HHHHHHHHHHHH-------HHHHHG-GGTEEEEEEEECSBCSHHHHHSCHH-HHHHHHTTCTT------CSCBCHHHHHH
T ss_pred             HHHHHHHHHHHH-------HHHHHh-hhCeEEEEEEeCCCcCcchhhcCHH-HHHHHHhcCCC------CCCCCHHHHHH
Confidence            554333222211       111111 1389999999999987632111000 00111222222      24789999999


Q ss_pred             HHHHHhcCCC--CCc-eEEeeCCCCc
Q 017977          272 LIYEALSNPS--YRG-VINGTAPNPV  294 (363)
Q Consensus       272 a~~~~~~~~~--~~g-~~~i~~~~~~  294 (363)
                      +++.++....  ..| ++++.+|..+
T Consensus       244 ~v~~L~s~~~~~itG~~i~vdGG~~~  269 (270)
T 3ftp_A          244 AVAFLASPQAGYITGTTLHVNGGMFM  269 (270)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTSSC
T ss_pred             HHHHHhCCCcCCccCcEEEECCCccc
Confidence            9999986433  344 8888887544

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.85  E-value=8e-21  Score=165.84  Aligned_cols=226  Identities=17%  Similarity=0.101  Sum_probs=146.1

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCccc---ccCCCCCccccCcccccCcchHHhhcc------CCC
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE---LIFPGKKTRFFPGVMIAEEPQWRDCIQ------GST  118 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~~~~~~~~~~~~d~~~~~~~~~~~~------~~d  118 (363)
                      ..+++++||||+|+||++++++|+++|++|++++|+.....   .+...........+|+.|.+++.++.+      ++|
T Consensus        29 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~iD  108 (273)
T 3uf0_A           29 LAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATRRVD  108 (273)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCCCc
Confidence            44579999999999999999999999999999997643211   111112222245689998887766543      789


Q ss_pred             EEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhh
Q 017977          119 AVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAK  193 (363)
Q Consensus       119 ~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~  193 (363)
                      +|||+||.....   ..+.+..+..+++|+.++.++++++.+.  ..+..++|++||..+..+       .+....|..+
T Consensus       109 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~-------~~~~~~Y~as  181 (273)
T 3uf0_A          109 VLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQG-------GRNVAAYAAS  181 (273)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-------CSSCHHHHHH
T ss_pred             EEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCC-------CCCChhHHHH
Confidence            999999975432   2356677889999999999999987432  135567999999854322       2333456655


Q ss_pred             hhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHH-HHHhCCCCCCCCCccccccHHHHHHH
Q 017977          194 VYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNL  272 (363)
Q Consensus       194 ~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~a  272 (363)
                      |.+...+.++       ....+. ..|+++.+++||.+.++............ ......++      ..+.+++|+|++
T Consensus       182 Kaa~~~l~~~-------la~e~~-~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------~r~~~pedva~~  247 (273)
T 3uf0_A          182 KHAVVGLTRA-------LASEWA-GRGVGVNALAPGYVVTANTAALRADDERAAEITARIPA------GRWATPEDMVGP  247 (273)
T ss_dssp             HHHHHHHHHH-------HHHHHG-GGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHHHSTT------SSCBCGGGGHHH
T ss_pred             HHHHHHHHHH-------HHHHHh-hcCcEEEEEEeCCCcCCchhhcccCHHHHHHHHhcCCC------CCCCCHHHHHHH
Confidence            4333222211       111111 23899999999999987432110000111 11222222      247889999999


Q ss_pred             HHHHhcCCC--CCc-eEEeeCCCCc
Q 017977          273 IYEALSNPS--YRG-VINGTAPNPV  294 (363)
Q Consensus       273 ~~~~~~~~~--~~g-~~~i~~~~~~  294 (363)
                      ++.++....  ..| ++++.+|...
T Consensus       248 v~~L~s~~a~~itG~~i~vdGG~~~  272 (273)
T 3uf0_A          248 AVFLASDAASYVHGQVLAVDGGWLA  272 (273)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHhCchhcCCcCCEEEECcCccC
Confidence            999997543  344 8888887543

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.85  E-value=7.7e-21  Score=164.46  Aligned_cols=220  Identities=12%  Similarity=0.048  Sum_probs=140.4

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCC-CCcc-ccCcccccCcchHHhhc------cCCCEE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTR-FFPGVMIAEEPQWRDCI------QGSTAV  120 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~-~~~~~d~~~~~~~~~~~------~~~d~V  120 (363)
                      .+++|+||||+|+||++++++|+++|++|++++|+.++.+..... .... ....+|+.|.+++.+++      .++|+|
T Consensus        10 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~l   89 (254)
T 2wsb_A           10 DGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPVSIL   89 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCCcEE
Confidence            446899999999999999999999999999999987553322111 0011 24457999988887766      478999


Q ss_pred             EEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCC--cchhhh
Q 017977          121 VNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWL--SDYCAK  193 (363)
Q Consensus       121 i~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~--~~~~~~  193 (363)
                      ||+||.....   ....+..+..+++|+.++.++++++.+.  ..+.+++|++||..+..+       .+..  ..|..+
T Consensus        90 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-------~~~~~~~~Y~~s  162 (254)
T 2wsb_A           90 VNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIV-------NRPQFASSYMAS  162 (254)
T ss_dssp             EECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-------CSSSCBHHHHHH
T ss_pred             EECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccC-------CCCCcchHHHHH
Confidence            9999975332   2244556788999999977777665431  145678999999843222       1111  344444


Q ss_pred             hhhcccchhhHHHHHHHHHHHhc--cCCCceEEEEeeceEEeCCCCcccchHHHH-HHHhCCCCCCCCCccccccHHHHH
Q 017977          194 VYCLVSFNRGVLVCREWEGTALK--VNKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIV  270 (363)
Q Consensus       194 ~~~~~~y~~~k~~~~~~~~~~~~--~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a  270 (363)
                                |............  ...|++++++||+.++++............ ......++      ..+++++|+|
T Consensus       163 ----------K~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~dva  226 (254)
T 2wsb_A          163 ----------KGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRERPELFETWLDMTPM------GRCGEPSEIA  226 (254)
T ss_dssp             ----------HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTCHHHHHHHHHTSTT------SSCBCHHHHH
T ss_pred             ----------HHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccccChHHHHHHHhcCCC------CCCCCHHHHH
Confidence                      3222222221111  123899999999999987421110000111 11222222      3478999999


Q ss_pred             HHHHHHhcCCC--CCc-eEEeeCC
Q 017977          271 NLIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       271 ~a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      ++++.++....  ..| .+++.+|
T Consensus       227 ~~~~~l~~~~~~~~~G~~~~v~gG  250 (254)
T 2wsb_A          227 AAALFLASPAASYVTGAILAVDGG  250 (254)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHhCcccccccCCEEEECCC
Confidence            99999986532  344 7777765

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.85  E-value=4.4e-21  Score=166.84  Aligned_cols=222  Identities=16%  Similarity=0.140  Sum_probs=140.8

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCC-CCccccCcccccCcchHHhhcc-------CCCE
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTA  119 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~d~  119 (363)
                      ..+++|+||||+|+||+++++.|+++|++|++++|+..+....... ........+|+.|.+++.++++       ++|+
T Consensus        25 l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  104 (266)
T 3grp_A           25 LTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDI  104 (266)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCCE
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCCE
Confidence            4457999999999999999999999999999999987654432111 1112245689999988887765       7899


Q ss_pred             EEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhhh
Q 017977          120 VVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKV  194 (363)
Q Consensus       120 Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~  194 (363)
                      |||+||.....   ....+..+..+++|+.++.++.+++.+.  ..+..++|++||..+.++       .+....|..+|
T Consensus       105 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~-------~~~~~~Y~asK  177 (266)
T 3grp_A          105 LVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVG-------NPGQTNYCAAK  177 (266)
T ss_dssp             EEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC--------------CHHHHHHHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCC-------CCCchhHHHHH
Confidence            99999975332   2345567888999999976666655431  145568999999854433       22233455554


Q ss_pred             hhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc-cchHHHHHHHhCCCCCCCCCccccccHHHHHHHH
Q 017977          195 YCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLI  273 (363)
Q Consensus       195 ~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~  273 (363)
                      .+...+.+       .....+. ..|+++.+++||.+.++..... .....  ......++      ..+.+++|+|+++
T Consensus       178 aa~~~~~~-------~la~e~~-~~gI~vn~v~PG~v~t~~~~~~~~~~~~--~~~~~~p~------~r~~~~edvA~~v  241 (266)
T 3grp_A          178 AGLIGFSK-------ALAQEIA-SRNITVNCIAPGFIKSAMTDKLNEKQKE--AIMAMIPM------KRMGIGEEIAFAT  241 (266)
T ss_dssp             HHHHHHHH-------HHHHHHG-GGTEEEEEEEECSBCSHHHHTCCHHHHH--HHHTTCTT------CSCBCHHHHHHHH
T ss_pred             HHHHHHHH-------HHHHHhh-hhCcEEEEEeeCcCCCchhhccCHHHHH--HHHhcCCC------CCCcCHHHHHHHH
Confidence            33222221       1111111 2389999999999987632111 11111  12222232      3478899999999


Q ss_pred             HHHhcCCC--CCc-eEEeeCCC
Q 017977          274 YEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       274 ~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      +.++....  ..| ++++.+|.
T Consensus       242 ~~L~s~~~~~itG~~i~vdGG~  263 (266)
T 3grp_A          242 VYLASDEAAYLTGQTLHINGGM  263 (266)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHhCccccCccCCEEEECCCe
Confidence            99987543  344 88887764

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.85  E-value=1.1e-20  Score=162.57  Aligned_cols=220  Identities=16%  Similarity=0.105  Sum_probs=142.3

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeC-CCCccccc----CCCCCccccCcccccCcchHHhhcc-------CC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTR-SRSKAELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (363)
                      +++|+||||+|+||++++++|+++|++|++++| +....+..    ...........+|+.|.+++.++++       ++
T Consensus         4 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   83 (246)
T 2uvd_A            4 GKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQV   83 (246)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            468999999999999999999999999999999 54332221    1111112244679999988887765       78


Q ss_pred             CEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhh
Q 017977          118 TAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCA  192 (363)
Q Consensus       118 d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~  192 (363)
                      |+|||+||.....   ....+..+..+++|+.++.++.+++.+.  ..+..++|++||.++.++       .+....|..
T Consensus        84 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------~~~~~~Y~a  156 (246)
T 2uvd_A           84 DILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTG-------NPGQANYVA  156 (246)
T ss_dssp             CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC-------CTTBHHHHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCC-------CCCCchHHH
Confidence            9999999975332   2355667889999999977776665431  145678999999854333       223345555


Q ss_pred             hhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCccc-chHHHHHHHhCCCCCCCCCccccccHHHHHH
Q 017977          193 KVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALA-KMIPLFMMFAGGPLGSGQQWFSWIHLDDIVN  271 (363)
Q Consensus       193 ~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  271 (363)
                      +|.+...+.++       ....+. ..|+++++++|+.+.++...... .....  .....+.      ..+++++|+|+
T Consensus       157 sK~a~~~~~~~-------la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~--~~~~~p~------~~~~~~~dvA~  220 (246)
T 2uvd_A          157 AKAGVIGLTKT-------SAKELA-SRNITVNAIAPGFIATDMTDVLDENIKAE--MLKLIPA------AQFGEAQDIAN  220 (246)
T ss_dssp             HHHHHHHHHHH-------HHHHHG-GGTEEEEEEEECSBGGGCSSCCCTTHHHH--HHHTCTT------CSCBCHHHHHH
T ss_pred             HHHHHHHHHHH-------HHHHhh-hcCeEEEEEEeccccCcchhhcCHHHHHH--HHhcCCC------CCCcCHHHHHH
Confidence            54332222211       111111 23899999999999877432211 11111  1122222      23789999999


Q ss_pred             HHHHHhcCCC--CCc-eEEeeCCC
Q 017977          272 LIYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       272 a~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      +++.++....  ..| .+++.+|.
T Consensus       221 ~~~~l~s~~~~~~tG~~~~vdgG~  244 (246)
T 2uvd_A          221 AVTFFASDQSKYITGQTLNVDGGM  244 (246)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             HHHHHcCchhcCCCCCEEEECcCc
Confidence            9999986543  334 77777763

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.85  E-value=4.1e-20  Score=160.96  Aligned_cols=224  Identities=15%  Similarity=0.138  Sum_probs=145.4

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCC-CCccccCcccccCcchHHhhcc-------CCCEE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTAV  120 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~d~V  120 (363)
                      .+++|+||||+|+||++++++|+++|++|++++|+..+....... ........+|+.|.+++.++++       ++|+|
T Consensus        11 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   90 (265)
T 2o23_A           11 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDVA   90 (265)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEE
Confidence            447899999999999999999999999999999988664432111 1112245689999988888776       79999


Q ss_pred             EEccCCCCCCC---------CChhhHHHHHHHHHHHHHHHHHHHHhC--CC------CCCCeEEEeccceecCCcccccc
Q 017977          121 VNLAGTPIGTR---------WSSEIKKEIKESRIRVTSKVVDLINES--PE------GVRPSVLELVKPKYLMRAAHQEM  183 (363)
Q Consensus       121 i~~a~~~~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~------~~~~~v~~SS~~~~yg~~~~~e~  183 (363)
                      ||+||......         ...+..+..+++|+.++.++++++.+.  ..      +..++|++||..+..+       
T Consensus        91 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-------  163 (265)
T 2o23_A           91 VNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEG-------  163 (265)
T ss_dssp             EECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHC-------
T ss_pred             EECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCC-------
Confidence            99999753321         355667889999999999999998763  11      4567999998843221       


Q ss_pred             cCCCcchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCccc-chHHHHHHHhCCCCCCCCCccc
Q 017977          184 ITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALA-KMIPLFMMFAGGPLGSGQQWFS  262 (363)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  262 (363)
                      .+....|..+|.+...+.+      . ....+. ..++++++++|+.+.++...... .....  .....+..     ..
T Consensus       164 ~~~~~~Y~~sK~a~~~~~~------~-la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~--~~~~~~~~-----~~  228 (265)
T 2o23_A          164 QVGQAAYSASKGGIVGMTL------P-IARDLA-PIGIRVMTIAPGLFGTPLLTSLPEKVCNF--LASQVPFP-----SR  228 (265)
T ss_dssp             CTTCHHHHHHHHHHHHHHH------H-HHHHHG-GGTEEEEEEEECCBCCC----------CH--HHHTCSSS-----CS
T ss_pred             CCCCchhHHHHHHHHHHHH------H-HHHHHh-hcCcEEEEEEeccccCccccccCHHHHHH--HHHcCCCc-----CC
Confidence            2223345554322221111      1 111111 23899999999999877432111 11111  11111210     23


Q ss_pred             cccHHHHHHHHHHHhcCCCCCc-eEEeeCCCCc
Q 017977          263 WIHLDDIVNLIYEALSNPSYRG-VINGTAPNPV  294 (363)
Q Consensus       263 ~i~v~D~a~a~~~~~~~~~~~g-~~~i~~~~~~  294 (363)
                      +++++|+|++++.+++.....| .+++.++..+
T Consensus       229 ~~~~~dva~~~~~l~~~~~~~G~~i~vdgG~~~  261 (265)
T 2o23_A          229 LGDPAEYAHLVQAIIENPFLNGEVIRLDGAIRM  261 (265)
T ss_dssp             CBCHHHHHHHHHHHHHCTTCCSCEEEESTTCCC
T ss_pred             CCCHHHHHHHHHHHhhcCccCceEEEECCCEec
Confidence            7899999999999997655455 7888777543

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.85  E-value=6.1e-21  Score=166.46  Aligned_cols=230  Identities=14%  Similarity=0.040  Sum_probs=148.0

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc-------CCCEEE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV  121 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~Vi  121 (363)
                      .+++++||||+|+||+++++.|+++|++|++++|++...+.............+|+.|.+++.++++       ++|+||
T Consensus         8 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv   87 (270)
T 1yde_A            8 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVV   87 (270)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            4578999999999999999999999999999999876543322111112245689999988887765       689999


Q ss_pred             EccCCCCC----CCCChhhHHHHHHHHHHHHHHHHHHHHhC-CCCCCCeEEEeccceecCCcccccccCCCcchhhhhhh
Q 017977          122 NLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYC  196 (363)
Q Consensus       122 ~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~  196 (363)
                      |+||....    .....+..+..+++|+.++.++++++.+. ..+..++|++||..+.++       .+....|..+|.+
T Consensus        88 ~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~-------~~~~~~Y~asKaa  160 (270)
T 1yde_A           88 NNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIG-------QAQAVPYVATKGA  160 (270)
T ss_dssp             ECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHC-------CTTCHHHHHHHHH
T ss_pred             ECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccCC-------CCCCcccHHHHHH
Confidence            99997422    12345567889999999999999988642 112467999999854443       2233455555433


Q ss_pred             cccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc----cchHHHH-HHHhCCCCCCCCCccccccHHHHHH
Q 017977          197 LVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL----AKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVN  271 (363)
Q Consensus       197 ~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~  271 (363)
                      ...+.++       ....+. ..|+++++++|+.++++.....    ......+ ......+++      .+..++|+|+
T Consensus       161 ~~~~~~~-------la~e~~-~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~------r~~~p~dva~  226 (270)
T 1yde_A          161 VTAMTKA-------LALDES-PYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLG------RMGQPAEVGA  226 (270)
T ss_dssp             HHHHHHH-------HHHHHG-GGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTS------SCBCHHHHHH
T ss_pred             HHHHHHH-------HHHHhh-hhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcCCCC------CCcCHHHHHH
Confidence            2222211       111111 2389999999999998732110    0111111 111222222      3678999999


Q ss_pred             HHHHHhcCCC-CCc-eEEeeCCCCcCHHHH
Q 017977          272 LIYEALSNPS-YRG-VINGTAPNPVRLAEM  299 (363)
Q Consensus       272 a~~~~~~~~~-~~g-~~~i~~~~~~s~~el  299 (363)
                      +++.++.... ..| .+++.+|..+...+.
T Consensus       227 ~v~~L~s~~~~itG~~i~vdGG~~~~~~~~  256 (270)
T 1yde_A          227 AAVFLASEANFCTGIELLVTGGAELGYGCK  256 (270)
T ss_dssp             HHHHHHHHCTTCCSCEEEESTTTTSCC---
T ss_pred             HHHHHcccCCCcCCCEEEECCCeecccCcC
Confidence            9999887533 344 888888866654433

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.85  E-value=1.9e-20  Score=161.14  Aligned_cols=215  Identities=18%  Similarity=0.140  Sum_probs=141.2

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc-------CCCEEE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV  121 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~Vi  121 (363)
                      .+++|+||||+|+||++++++|+++|++|++++|+........       ...+|+.|.+++.++++       ++|+||
T Consensus        14 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-------~~~~D~~~~~~~~~~~~~~~~~~g~id~lv   86 (247)
T 1uzm_A           14 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF-------GVEVDVTDSDAVDRAFTAVEEHQGPVEVLV   86 (247)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSE-------EEECCTTCHHHHHHHHHHHHHHHSSCSEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHhc-------CeeccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            3468999999999999999999999999999999876543321       24579999888877665       579999


Q ss_pred             EccCCCCC---CCCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhhhhh
Q 017977          122 NLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYC  196 (363)
Q Consensus       122 ~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~  196 (363)
                      |+||....   ...+.+..+..+++|+.++.++++++.+.  ..+..++|++||..+.++       .+....|..+|.+
T Consensus        87 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-------~~~~~~Y~~sK~a  159 (247)
T 1uzm_A           87 SNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWG-------IGNQANYAASKAG  159 (247)
T ss_dssp             EECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC------------CCHHHHHHHHH
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccC-------CCCChhHHHHHHH
Confidence            99997533   23456677889999999999998887642  145678999999854443       2233345555433


Q ss_pred             cccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHH-HHhCCCCCCCCCccccccHHHHHHHHHH
Q 017977          197 LVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFM-MFAGGPLGSGQQWFSWIHLDDIVNLIYE  275 (363)
Q Consensus       197 ~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~D~a~a~~~  275 (363)
                      ...+.+      .+..+ +. ..|+++++++|+.+.++.......  .... .....+.      ..+.+++|+|++++.
T Consensus       160 ~~~~~~------~la~e-~~-~~gi~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~p~------~~~~~~~dvA~~~~~  223 (247)
T 1uzm_A          160 VIGMAR------SIARE-LS-KANVTANVVAPGYIDTDMTRALDE--RIQQGALQFIPA------KRVGTPAEVAGVVSF  223 (247)
T ss_dssp             HHHHHH------HHHHH-HG-GGTEEEEEEEECSBCCHHHHHSCH--HHHHHHGGGCTT------CSCBCHHHHHHHHHH
T ss_pred             HHHHHH------HHHHH-hh-hcCcEEEEEEeCCCcccchhhcCH--HHHHHHHhcCCC------CCCcCHHHHHHHHHH
Confidence            222221      11111 11 238999999999997653111000  0011 1111121      237899999999999


Q ss_pred             HhcCCC--CCc-eEEeeCCCC
Q 017977          276 ALSNPS--YRG-VINGTAPNP  293 (363)
Q Consensus       276 ~~~~~~--~~g-~~~i~~~~~  293 (363)
                      ++....  ..| .+++.+|..
T Consensus       224 l~s~~~~~~~G~~i~vdgG~~  244 (247)
T 1uzm_A          224 LASEDASYISGAVIPVDGGMG  244 (247)
T ss_dssp             HHSGGGTTCCSCEEEESTTTT
T ss_pred             HcCccccCCcCCEEEECCCcc
Confidence            987532  344 788877643

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.85  E-value=7.2e-21  Score=165.69  Aligned_cols=225  Identities=13%  Similarity=0.029  Sum_probs=144.8

Q ss_pred             CccEEEEecCc--chHHHHHHHHHHhCCCEEEEEeCCCCc---ccccCCCCCccccCcccccCcchHHhhcc-------C
Q 017977           49 SQMTVSVTGAT--GFIGRRLVQRLQADNHQVRVLTRSRSK---AELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (363)
Q Consensus        49 ~~~~vlVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~---~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (363)
                      .+++|+||||+  |+||+++++.|+++|++|++++|+...   ...+...........+|+.|.+++.++++       +
T Consensus         8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   87 (265)
T 1qsg_A            8 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPK   87 (265)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSS
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            34689999999  999999999999999999999998721   11111100111245689999988877765       6


Q ss_pred             CCEEEEccCCCCC----C---C-CChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCc
Q 017977          117 STAVVNLAGTPIG----T---R-WSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLS  188 (363)
Q Consensus       117 ~d~Vi~~a~~~~~----~---~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~  188 (363)
                      +|+|||+||....    .   . ...+..+..+++|+.++.++++++.+......++|++||.++.++       .+...
T Consensus        88 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~-------~~~~~  160 (265)
T 1qsg_A           88 FDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERA-------IPNYN  160 (265)
T ss_dssp             EEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSB-------CTTTT
T ss_pred             CCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccC-------CCCch
Confidence            8999999997432    1   1 455667889999999999999999873111247999999743222       22233


Q ss_pred             chhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHH-HHhCCCCCCCCCccccccHH
Q 017977          189 DYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFM-MFAGGPLGSGQQWFSWIHLD  267 (363)
Q Consensus       189 ~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~  267 (363)
                      .|..+|.+...+.++       ....+. ..|+++++++|+.+.++............. .....++      ..+.+++
T Consensus       161 ~Y~~sK~a~~~~~~~-------la~e~~-~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~------~~~~~~~  226 (265)
T 1qsg_A          161 VMGLAKASLEANVRY-------MANAMG-PEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPI------RRTVTIE  226 (265)
T ss_dssp             HHHHHHHHHHHHHHH-------HHHHHT-TTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTT------SSCCCHH
T ss_pred             HHHHHHHHHHHHHHH-------HHHHhh-hcCeEEEEEEeCCCccchhhcccccHHHHHHHHhcCCC------CCCCCHH
Confidence            455554332222210       111111 238999999999999885322111111111 1112222      1368899


Q ss_pred             HHHHHHHHHhcCCC--CCc-eEEeeCCCCc
Q 017977          268 DIVNLIYEALSNPS--YRG-VINGTAPNPV  294 (363)
Q Consensus       268 D~a~a~~~~~~~~~--~~g-~~~i~~~~~~  294 (363)
                      |+|++++.++....  ..| .+++.++..+
T Consensus       227 dva~~v~~l~s~~~~~~tG~~~~vdgG~~~  256 (265)
T 1qsg_A          227 DVGNSAAFLCSDLSAGISGEVVHVDGGFSI  256 (265)
T ss_dssp             HHHHHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHHHhCchhcCccCCEEEECCCcCC
Confidence            99999999986533  234 8888887543

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.85  E-value=1.2e-20  Score=164.03  Aligned_cols=224  Identities=11%  Similarity=0.003  Sum_probs=142.2

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeC-CCCcccccC----CCCCccccCcccccCcchHHhhcc-------C
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTR-SRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (363)
                      .+++|+||||+|+||++++++|+++|++|++++| +........    ..........+|+.|.+++.++++       +
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   85 (261)
T 1gee_A            6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGK   85 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            3468999999999999999999999999999999 543322211    111112245679999888877765       7


Q ss_pred             CCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCC-CCCeEEEeccceecCCcccccccCCCcch
Q 017977          117 STAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLELVKPKYLMRAAHQEMITWLSDY  190 (363)
Q Consensus       117 ~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~-~~~~v~~SS~~~~yg~~~~~e~~~~~~~~  190 (363)
                      +|+|||+||.....   ....+..+..+++|+.++.++++++.+.  ..+ ..++|++||..+..+       .+....|
T Consensus        86 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~-------~~~~~~Y  158 (261)
T 1gee_A           86 LDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIP-------WPLFVHY  158 (261)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSC-------CTTCHHH
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCC-------CCCccHH
Confidence            89999999974321   2345667889999999999888876652  123 568999999843211       2233345


Q ss_pred             hhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHH-HHHhCCCCCCCCCccccccHHHH
Q 017977          191 CAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDI  269 (363)
Q Consensus       191 ~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~  269 (363)
                      ..+|.+...+.+      .+ ...+. ..+++++++||+.++++............ ......++      ..+++++|+
T Consensus       159 ~~sK~a~~~~~~------~l-a~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~dv  224 (261)
T 1gee_A          159 AASKGGMKLMTE------TL-ALEYA-PKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPM------GYIGEPEEI  224 (261)
T ss_dssp             HHHHHHHHHHHH------HH-HHHHG-GGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTT------SSCBCHHHH
T ss_pred             HHHHHHHHHHHH------HH-HHHhc-ccCeEEEEEeeCCcCCchhhhcccChhHHHHHHhcCCC------CCCcCHHHH
Confidence            544322211111      11 11111 23899999999999987432110000111 11111121      247899999


Q ss_pred             HHHHHHHhcCCC--CCc-eEEeeCCCC
Q 017977          270 VNLIYEALSNPS--YRG-VINGTAPNP  293 (363)
Q Consensus       270 a~a~~~~~~~~~--~~g-~~~i~~~~~  293 (363)
                      |++++.++....  ..| .+++.++..
T Consensus       225 a~~~~~l~~~~~~~~~G~~~~v~gg~~  251 (261)
T 1gee_A          225 AAVAAWLASSEASYVTGITLFADGGMT  251 (261)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHhCccccCCCCcEEEEcCCcc
Confidence            999999987532  334 888887743

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.85  E-value=4.8e-20  Score=161.80  Aligned_cols=229  Identities=17%  Similarity=0.033  Sum_probs=144.8

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCccccc----CCCCCccccCcccccCcchHHhhcc-------C
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (363)
                      ..+++++||||+|+||+++++.|+++|++|++++|+....+..    ...........+|+.|.+++.++++       +
T Consensus        26 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  105 (283)
T 3v8b_A           26 QPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGH  105 (283)
T ss_dssp             -CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            3456899999999999999999999999999999987654322    2222222345689999988877765       6


Q ss_pred             CCEEEEccCCCCC----CCCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcch
Q 017977          117 STAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDY  190 (363)
Q Consensus       117 ~d~Vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~  190 (363)
                      +|++||+||....    ...+.+..+..+++|+.++.++++++.+.  ..+..++|++||.++...     ...+....|
T Consensus       106 iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~-----~~~~~~~~Y  180 (283)
T 3v8b_A          106 LDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRT-----FTTPGATAY  180 (283)
T ss_dssp             CCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTB-----CCSTTCHHH
T ss_pred             CCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccC-----CCCCCchHH
Confidence            8999999997422    23455677889999999999999988421  145668999999843210     012233445


Q ss_pred             hhhhhhcccchhhHHHHHHHHHHHhc-cCCCceEEEEeeceEEeCCCCcccchHHHHHHHh-CCCCCCCCCc--cccccH
Q 017977          191 CAKVYCLVSFNRGVLVCREWEGTALK-VNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFA-GGPLGSGQQW--FSWIHL  266 (363)
Q Consensus       191 ~~~~~~~~~y~~~k~~~~~~~~~~~~-~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~i~v  266 (363)
                      ..+|.+...+.+         ....+ ...|+++..++||.+.++.......... ..... ..........  ..+..+
T Consensus       181 ~asKaa~~~l~~---------~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~~r~~~p  250 (283)
T 3v8b_A          181 TATKAAQVAIVQ---------QLALELGKHHIRVNAVCPGAIETNISDNTKLRHE-EETAIPVEWPKGQVPITDGQPGRS  250 (283)
T ss_dssp             HHHHHHHHHHHH---------HHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCH-HHHSCCCBCTTCSCGGGTTCCBCH
T ss_pred             HHHHHHHHHHHH---------HHHHHhCccCcEEEEEEeCCCcCCcccccccccc-hhhhhhhhhhhhcCccccCCCCCH
Confidence            555433222211         11111 1238999999999998875432111000 00000 0000111111  246789


Q ss_pred             HHHHHHHHHHhcCCC--CCc-eEEeeCC
Q 017977          267 DDIVNLIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       267 ~D~a~a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      +|+|++++.++....  ..| .+++.+|
T Consensus       251 edvA~~v~fL~s~~a~~itG~~i~vdGG  278 (283)
T 3v8b_A          251 EDVAELIRFLVSERARHVTGSPVWIDGG  278 (283)
T ss_dssp             HHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHHHcCccccCCcCCEEEECcC
Confidence            999999999987543  345 7777766

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.85  E-value=1.4e-20  Score=164.59  Aligned_cols=227  Identities=14%  Similarity=0.048  Sum_probs=148.2

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCC-CCccccCcccccCcchHHhhcc-------CCCE
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTA  119 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~d~  119 (363)
                      ..+++++||||+|+||+++++.|+++|++|++++|+.......... ........+|+.|.++++++++       ++|+
T Consensus        25 l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  104 (277)
T 4dqx_A           25 LNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDV  104 (277)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            3457899999999999999999999999999999987654332211 1112245689999988887765       7899


Q ss_pred             EEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhhh
Q 017977          120 VVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKV  194 (363)
Q Consensus       120 Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~  194 (363)
                      |||+||.....   ..+.+..+..+++|+.++.++++++.+.  ..+..++|++||..+..+       .+....|..+|
T Consensus       105 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------~~~~~~Y~asK  177 (277)
T 4dqx_A          105 LVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSA-------IADRTAYVASK  177 (277)
T ss_dssp             EEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSC-------CTTBHHHHHHH
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcC-------CCCChhHHHHH
Confidence            99999975332   3455677889999999999888888643  144568999999843222       22334565554


Q ss_pred             hhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCC-Ccc---cchHHHH-HHHhCCCCCCCCCccccccHHHH
Q 017977          195 YCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDG-GAL---AKMIPLF-MMFAGGPLGSGQQWFSWIHLDDI  269 (363)
Q Consensus       195 ~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~-~~~---~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~  269 (363)
                      .+...+.++       ....+. ..|+++.+++||.+.++.. ...   ....... ......+      ...+.+++|+
T Consensus       178 aa~~~l~~~-------la~e~~-~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~------~~r~~~pedv  243 (277)
T 4dqx_A          178 GAISSLTRA-------MAMDHA-KEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAV------MDRMGTAEEI  243 (277)
T ss_dssp             HHHHHHHHH-------HHHHHG-GGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTTST------TCSCBCHHHH
T ss_pred             HHHHHHHHH-------HHHHhh-hcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhcCc------ccCCcCHHHH
Confidence            333222211       111111 2389999999999987531 000   0011111 1122222      2247889999


Q ss_pred             HHHHHHHhcCCC---CCceEEeeCCCCcC
Q 017977          270 VNLIYEALSNPS---YRGVINGTAPNPVR  295 (363)
Q Consensus       270 a~a~~~~~~~~~---~~g~~~i~~~~~~s  295 (363)
                      |++++.++....   .+.++++.+|..++
T Consensus       244 A~~v~~L~s~~~~~itG~~i~vdGG~~~~  272 (277)
T 4dqx_A          244 AEAMLFLASDRSRFATGSILTVDGGSSIG  272 (277)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESSSSSSC
T ss_pred             HHHHHHHhCCccCCCcCCEEEECCchhhh
Confidence            999999997543   34488888876543

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.85  E-value=5e-21  Score=165.54  Aligned_cols=219  Identities=16%  Similarity=0.107  Sum_probs=123.1

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCC----CCCccccCcccccCcchHHhhcc-------C
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (363)
                      .++++|+||||+|+||++++++|+++|++|++++|+.........    .........+|+.|.+++.++++       +
T Consensus         7 ~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   86 (253)
T 3qiv_A            7 FENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGG   86 (253)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            345789999999999999999999999999999998765433211    11122245689999988887765       7


Q ss_pred             CCEEEEccCCCCC------CCCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCc
Q 017977          117 STAVVNLAGTPIG------TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLS  188 (363)
Q Consensus       117 ~d~Vi~~a~~~~~------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~  188 (363)
                      +|+|||+||....      ...+.+..+..+++|+.++.++.+++.+.  ..+..++|++||.. .|         +..+
T Consensus        87 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~-~~---------~~~~  156 (253)
T 3qiv_A           87 IDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTA-AW---------LYSN  156 (253)
T ss_dssp             CCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC------------------
T ss_pred             CCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCcc-cc---------CCCc
Confidence            8999999997321      13356677889999999966666655431  14566799999983 22         2223


Q ss_pred             chhhhhhhcccchhhHHHHHHHHHHHh-cc-CCCceEEEEeeceEEeCCCCccc--chHHHHHHHhCCCCCCCCCccccc
Q 017977          189 DYCAKVYCLVSFNRGVLVCREWEGTAL-KV-NKDVRLALIRIGIVLGKDGGALA--KMIPLFMMFAGGPLGSGQQWFSWI  264 (363)
Q Consensus       189 ~~~~~~~~~~~y~~~k~~~~~~~~~~~-~~-~~~~~~~ilRp~~v~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i  264 (363)
                      .|..+|          .....+..... +. ..|+++++++|+.+.++......  ....  ....+.      ....+.
T Consensus       157 ~Y~asK----------~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~--~~~~~~------~~~~~~  218 (253)
T 3qiv_A          157 YYGLAK----------VGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTPKEMVD--DIVKGL------PLSRMG  218 (253)
T ss_dssp             ---CCH----------HHHHHHHHHHHHHTTTTTEEEEEEEC--------------------------------------
T ss_pred             hhHHHH----------HHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCcHHHHH--HHhccC------CCCCCC
Confidence            454443          22222211111 11 23899999999999987532210  1110  111111      122366


Q ss_pred             cHHHHHHHHHHHhcCCC---CCceEEeeCCCCc
Q 017977          265 HLDDIVNLIYEALSNPS---YRGVINGTAPNPV  294 (363)
Q Consensus       265 ~v~D~a~a~~~~~~~~~---~~g~~~i~~~~~~  294 (363)
                      +++|+|++++.++....   .+.+|++.+|..+
T Consensus       219 ~~~dva~~~~~l~s~~~~~~tG~~~~vdgG~~~  251 (253)
T 3qiv_A          219 TPDDLVGMCLFLLSDEASWITGQIFNVDGGQII  251 (253)
T ss_dssp             -CCHHHHHHHHHHSGGGTTCCSCEEEC------
T ss_pred             CHHHHHHHHHHHcCccccCCCCCEEEECCCeec
Confidence            78999999999987543   3448999887644

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.84  E-value=2e-20  Score=163.93  Aligned_cols=221  Identities=17%  Similarity=0.098  Sum_probs=141.2

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeC-CCCcccccCCC-----CCccccCcccccCc----chHHhhcc---
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTR-SRSKAELIFPG-----KKTRFFPGVMIAEE----PQWRDCIQ---  115 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~~-----~~~~~~~~~d~~~~----~~~~~~~~---  115 (363)
                      .+++|+||||+|+||+++++.|+++|++|++++| +..........     ........+|+.|.    +++.++++   
T Consensus        10 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   89 (276)
T 1mxh_A           10 ECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSF   89 (276)
T ss_dssp             -CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHHH
Confidence            3468999999999999999999999999999999 65443221110     11122456799999    87777665   


Q ss_pred             ----CCCEEEEccCCCCCCC---CCh-----------hhHHHHHHHHHHHHHHHHHHHHhC-CCCC------CCeEEEec
Q 017977          116 ----GSTAVVNLAGTPIGTR---WSS-----------EIKKEIKESRIRVTSKVVDLINES-PEGV------RPSVLELV  170 (363)
Q Consensus       116 ----~~d~Vi~~a~~~~~~~---~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~-~~~~------~~~v~~SS  170 (363)
                          ++|+|||+||......   ...           +..+..+++|+.++.++++++.+. ..+.      .++|++||
T Consensus        90 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~isS  169 (276)
T 1mxh_A           90 RAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCD  169 (276)
T ss_dssp             HHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECC
T ss_pred             HhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEEECc
Confidence                7899999999743321   223           556789999999999999999884 1122      67999999


Q ss_pred             cceecCCcccccccCCCcchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHh
Q 017977          171 KPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFA  250 (363)
Q Consensus       171 ~~~~yg~~~~~e~~~~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~  250 (363)
                      ..+..+       .+....|..+|.+...+.++       ....+. ..|+++++++||.+.++ .........  ....
T Consensus       170 ~~~~~~-------~~~~~~Y~asK~a~~~l~~~-------la~e~~-~~gi~v~~v~PG~v~t~-~~~~~~~~~--~~~~  231 (276)
T 1mxh_A          170 AMTDLP-------LPGFCVYTMAKHALGGLTRA-------AALELA-PRHIRVNAVAPGLSLLP-PAMPQETQE--EYRR  231 (276)
T ss_dssp             GGGGSC-------CTTCHHHHHHHHHHHHHHHH-------HHHHHG-GGTEEEEEEEESSBSCC-SSSCHHHHH--HHHT
T ss_pred             hhhcCC-------CCCCeehHHHHHHHHHHHHH-------HHHHHh-hcCeEEEEEecCcccCC-ccCCHHHHH--HHHh
Confidence            843222       22334555554332222211       111111 23899999999999998 321111111  1122


Q ss_pred             CCCCCCCCCccccccHHHHHHHHHHHhcCCC--CCc-eEEeeCCC
Q 017977          251 GGPLGSGQQWFSWIHLDDIVNLIYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       251 ~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      ..+++     +++.+++|+|++++.++....  ..| .+++.+|.
T Consensus       232 ~~p~~-----r~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~  271 (276)
T 1mxh_A          232 KVPLG-----QSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGL  271 (276)
T ss_dssp             TCTTT-----SCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             cCCCC-----CCCCCHHHHHHHHHHHhCccccCccCcEEEECCch
Confidence            22221     227899999999999987533  234 78887764

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.84  E-value=1.8e-21  Score=172.02  Aligned_cols=239  Identities=16%  Similarity=0.073  Sum_probs=151.4

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccC----CCCC---ccccCcccccCcchHHhhcc-----
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKK---TRFFPGVMIAEEPQWRDCIQ-----  115 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~---~~~~~~~d~~~~~~~~~~~~-----  115 (363)
                      ..+++++||||+|+||+++++.|+++|++|++++|+..+.+...    ....   ......+|+.|.+++.++++     
T Consensus        24 l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  103 (297)
T 1xhl_A           24 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK  103 (297)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHh
Confidence            34578999999999999999999999999999999875533221    1111   12245689999988877765     


Q ss_pred             --CCCEEEEccCCCCCC-----CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCC
Q 017977          116 --GSTAVVNLAGTPIGT-----RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITW  186 (363)
Q Consensus       116 --~~d~Vi~~a~~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~  186 (363)
                        ++|+|||+||.....     ....+..+..+++|+.++.++++++.+.  ..+ .++|++||..+..+.      .+.
T Consensus       104 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~~------~~~  176 (297)
T 1xhl_A          104 FGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQA------HSG  176 (297)
T ss_dssp             HSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSC------CTT
T ss_pred             cCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccCC------CCC
Confidence              789999999974322     2345667889999999999998888753  133 689999998432110      022


Q ss_pred             CcchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc---cc----hHHHHHHHhCCCCCCCCC
Q 017977          187 LSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL---AK----MIPLFMMFAGGPLGSGQQ  259 (363)
Q Consensus       187 ~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~---~~----~~~~~~~~~~~~~~~~~~  259 (363)
                      ...|..+|.+...+.++       ....+. ..|+++++++||.+.++.....   ..    .......... .    ..
T Consensus       177 ~~~Y~asKaa~~~l~~~-------la~el~-~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~-~----~p  243 (297)
T 1xhl_A          177 YPYYACAKAALDQYTRC-------TAIDLI-QHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKE-C----IP  243 (297)
T ss_dssp             SHHHHHHHHHHHHHHHH-------HHHHHG-GGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTT-T----CT
T ss_pred             cchHHHHHHHHHHHHHH-------HHHHhc-ccCeEEEEEeeCCCcCccccccccccccccchHHHHHHHHh-c----CC
Confidence            33455544322222110       111111 2389999999999988632111   00    0001111111 1    11


Q ss_pred             ccccccHHHHHHHHHHHhcCC---CCCc-eEEeeCCCCcCHHHHHHHHHHH
Q 017977          260 WFSWIHLDDIVNLIYEALSNP---SYRG-VINGTAPNPVRLAEMCDHLGNV  306 (363)
Q Consensus       260 ~~~~i~v~D~a~a~~~~~~~~---~~~g-~~~i~~~~~~s~~el~~~i~~~  306 (363)
                      ...+.+++|+|++++.++...   ...| .+++.+|......+.+..+.+.
T Consensus       244 ~~r~~~pedvA~~v~~l~s~~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~  294 (297)
T 1xhl_A          244 VGHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGSTLVMGMQTHDLMSV  294 (297)
T ss_dssp             TSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGCCGGGGSCHHHH
T ss_pred             CCCCcCHHHHHHHHHHHhCCcccCCccCcEEEECCCccccccccccchhhh
Confidence            224789999999999998754   2344 8888887666655554444443

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.84  E-value=3e-21  Score=166.32  Aligned_cols=219  Identities=13%  Similarity=0.096  Sum_probs=132.0

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEE-eCCCCcccccC----CCCCccccCcccccCcchHHhhcc-------C
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVL-TRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (363)
                      .+++|+||||+|+||++++++|+++|++|+++ .|++...+...    ..........+|+.|.+++.++++       +
T Consensus         4 ~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (247)
T 2hq1_A            4 KGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFGR   83 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            34789999999999999999999999999999 56554432211    111112245689999988887765       7


Q ss_pred             CCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchh
Q 017977          117 STAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYC  191 (363)
Q Consensus       117 ~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~  191 (363)
                      +|+|||+||.....   ..+.+..+..+++|+.++.++++++.+.  ..+.+++|++||..+.|+       .+....|.
T Consensus        84 ~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-------~~~~~~Y~  156 (247)
T 2hq1_A           84 IDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIG-------NAGQANYA  156 (247)
T ss_dssp             CCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC----------------CHHHH
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccC-------CCCCcHhH
Confidence            89999999974321   1234455788999999988888877642  135678999999855554       22233455


Q ss_pred             hhhhhcccchhhHHHHHHHHHHHhc--cCCCceEEEEeeceEEeCCCCcc-cchHHHHHHHhCCCCCCCCCccccccHHH
Q 017977          192 AKVYCLVSFNRGVLVCREWEGTALK--VNKDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAGGPLGSGQQWFSWIHLDD  268 (363)
Q Consensus       192 ~~~~~~~~y~~~k~~~~~~~~~~~~--~~~~~~~~ilRp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  268 (363)
                      .+|.          ....+......  ...++++++++|+.+.++..... .....  ....+.+      ...+++++|
T Consensus       157 ~sK~----------a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~--~~~~~~~------~~~~~~~~d  218 (247)
T 2hq1_A          157 ASKA----------GLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVLPDKVKE--MYLNNIP------LKRFGTPEE  218 (247)
T ss_dssp             HHHH----------HHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHH--HHHTTST------TSSCBCHHH
T ss_pred             HHHH----------HHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhcchHHHH--HHHhhCC------CCCCCCHHH
Confidence            5432          22222111111  12389999999999876521111 11111  1122222      234789999


Q ss_pred             HHHHHHHHhcCCC--CCc-eEEeeCCC
Q 017977          269 IVNLIYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       269 ~a~a~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      +|++++.++..+.  ..| .|++.+|.
T Consensus       219 va~~~~~l~~~~~~~~~G~~~~v~gG~  245 (247)
T 2hq1_A          219 VANVVGFLASDDSNYITGQVINIDGGL  245 (247)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHHHHcCcccccccCcEEEeCCCc
Confidence            9999999887542  234 89998874

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.84  E-value=1.4e-20  Score=162.65  Aligned_cols=220  Identities=15%  Similarity=0.115  Sum_probs=140.9

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCC-CCccccCcccccCcchHHhhcc-------CCCEE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTAV  120 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~d~V  120 (363)
                      .+++|+||||+|+||++++++|+++|++|++++|+.++....... ........+|+.|.+++.++++       ++|+|
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l   83 (254)
T 1hdc_A            4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGL   83 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            346899999999999999999999999999999987654332211 1112244579999988887775       79999


Q ss_pred             EEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHH----HHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhhh
Q 017977          121 VNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVD----LINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAK  193 (363)
Q Consensus       121 i~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~----~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~  193 (363)
                      ||+||.....   ..+.+..+..+++|+.++..+.+    .+++  .+..++|++||.++.++       .+....|..+
T Consensus        84 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~~~g~iv~isS~~~~~~-------~~~~~~Y~as  154 (254)
T 1hdc_A           84 VNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKD--AGGGSIVNISSAAGLMG-------LALTSSYGAS  154 (254)
T ss_dssp             EECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCEEEEEECCGGGTSC-------CTTCHHHHHH
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH--cCCCEEEEECchhhccC-------CCCchhHHHH
Confidence            9999974332   23556678899999999875544    4444  45678999999843222       2233455555


Q ss_pred             hhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccc-cHHHHHHH
Q 017977          194 VYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWI-HLDDIVNL  272 (363)
Q Consensus       194 ~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~v~D~a~a  272 (363)
                      |.+...+.++       ....+. ..|+++++++|+.++++....       +.......+........+. +++|+|++
T Consensus       155 K~a~~~~~~~-------la~e~~-~~gi~v~~v~Pg~v~t~~~~~-------~~~~~~~~~~~~~p~~~~~~~~~dvA~~  219 (254)
T 1hdc_A          155 KWGVRGLSKL-------AAVELG-TDRIRVNSVHPGMTYTPMTAE-------TGIRQGEGNYPNTPMGRVGNEPGEIAGA  219 (254)
T ss_dssp             HHHHHHHHHH-------HHHHHG-GGTEEEEEEEECSBCCHHHHH-------HTCCCSTTSCTTSTTSSCB-CHHHHHHH
T ss_pred             HHHHHHHHHH-------HHHHhh-hcCeEEEEEecccCcCccccc-------cchhHHHHHHhcCCCCCCCCCHHHHHHH
Confidence            4332222211       111111 238999999999998763110       0000000011111112367 99999999


Q ss_pred             HHHHhcCCC--CCc-eEEeeCCC
Q 017977          273 IYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       273 ~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      ++.++....  ..| .+++.++.
T Consensus       220 v~~l~s~~~~~~tG~~~~vdgG~  242 (254)
T 1hdc_A          220 VVKLLSDTSSYVTGAELAVDGGW  242 (254)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHHhCchhcCCCCCEEEECCCc
Confidence            999987543  344 77777764

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.84  E-value=2.1e-20  Score=161.11  Aligned_cols=223  Identities=13%  Similarity=0.055  Sum_probs=137.7

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCC-Ccccc-cCCCCCccccCcccccCcchHHhhc-------cCCCE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR-SKAEL-IFPGKKTRFFPGVMIAEEPQWRDCI-------QGSTA  119 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~-~~~~~~~~~~~~~d~~~~~~~~~~~-------~~~d~  119 (363)
                      .+++|+||||+|+||+++++.|+++|++|++++|+. ..... +...........+|+.|.+++.+++       .++|+
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   85 (249)
T 2ew8_A            6 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDI   85 (249)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCCE
Confidence            346899999999999999999999999999999987 43322 1111111224468999988887765       37899


Q ss_pred             EEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhhh
Q 017977          120 VVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKV  194 (363)
Q Consensus       120 Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~  194 (363)
                      |||+||.....   ..+.+..+..+++|+.++.++++++.+.  ..+..++|++||..+..+       .+....|..+|
T Consensus        86 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------~~~~~~Y~asK  158 (249)
T 2ew8_A           86 LVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLK-------IEAYTHYISTK  158 (249)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSC-------CSSCHHHHHHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccC-------CCCchhHHHHH
Confidence            99999974332   2355667889999999988888774321  045678999999843221       22334555554


Q ss_pred             hhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCC-cccchHHHHHHHhCCCCCCCCCccccccHHHHHHHH
Q 017977          195 YCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGG-ALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLI  273 (363)
Q Consensus       195 ~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~  273 (363)
                      .+...+.++       ....+. ..|+++++++|+.+.++... ....-.+..  ...  +.  .....+.+++|+|+++
T Consensus       159 ~a~~~~~~~-------la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~--~~~--~~--~~~~~~~~p~dva~~~  224 (249)
T 2ew8_A          159 AANIGFTRA-------LASDLG-KDGITVNAIAPSLVRTATTEASALSAMFDV--LPN--ML--QAIPRLQVPLDLTGAA  224 (249)
T ss_dssp             HHHHHHHHH-------HHHHHG-GGTEEEEEEEECCC--------------------C--TT--SSSCSCCCTHHHHHHH
T ss_pred             HHHHHHHHH-------HHHHHH-hcCcEEEEEecCcCcCccchhccccchhhH--HHH--hh--CccCCCCCHHHHHHHH
Confidence            333222211       111111 23899999999999887432 110000000  000  00  1122478999999999


Q ss_pred             HHHhcCCC--CCc-eEEeeCCC
Q 017977          274 YEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       274 ~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      +.++....  ..| .+++.+|.
T Consensus       225 ~~l~s~~~~~~tG~~~~vdGG~  246 (249)
T 2ew8_A          225 AFLASDDASFITGQTLAVDGGM  246 (249)
T ss_dssp             HHHTSGGGTTCCSCEEEESSSC
T ss_pred             HHHcCcccCCCCCcEEEECCCc
Confidence            99987532  344 77777764

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.84  E-value=4.2e-20  Score=162.52  Aligned_cols=223  Identities=12%  Similarity=0.016  Sum_probs=144.1

Q ss_pred             CccEEEEecCc--chHHHHHHHHHHhCCCEEEEEeCCCC---cccccCCCCCccccCcccccCcchHHhhcc-------C
Q 017977           49 SQMTVSVTGAT--GFIGRRLVQRLQADNHQVRVLTRSRS---KAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (363)
Q Consensus        49 ~~~~vlVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~---~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (363)
                      .+++|+||||+  |+||+++++.|+++|++|++++|+..   ....+...........+|+.|.+++.++++       +
T Consensus        20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   99 (285)
T 2p91_A           20 EGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWGS   99 (285)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            44689999999  99999999999999999999999874   111111100112245689999988877765       6


Q ss_pred             CCEEEEccCCCCC-------CCCChhhHHHHHHHHHHHHHHHHHHHHhC-CCCCCCeEEEeccceecCCcccccccCCCc
Q 017977          117 STAVVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLELVKPKYLMRAAHQEMITWLS  188 (363)
Q Consensus       117 ~d~Vi~~a~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~  188 (363)
                      +|+|||+||....       ...+.+..+..+++|+.++.++++++.+. .....++|++||.++..+       .+...
T Consensus       100 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~-------~~~~~  172 (285)
T 2p91_A          100 LDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKV-------VPHYN  172 (285)
T ss_dssp             CCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSB-------CTTTT
T ss_pred             CCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccC-------CCCcc
Confidence            8999999997432       13455667889999999999999999874 213368999999743222       22333


Q ss_pred             chhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHH-HHhCCCCCCCCCccccccHH
Q 017977          189 DYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFM-MFAGGPLGSGQQWFSWIHLD  267 (363)
Q Consensus       189 ~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~  267 (363)
                      .|..+|.+...+.++       ....+. ..|+++++++||.+.++............. .....+++      .+.+++
T Consensus       173 ~Y~~sK~a~~~~~~~-------la~e~~-~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~------~~~~~~  238 (285)
T 2p91_A          173 VMGIAKAALESTVRY-------LAYDIA-KHGHRINAISAGPVKTLAAYSITGFHLLMEHTTKVNPFG------KPITIE  238 (285)
T ss_dssp             HHHHHHHHHHHHHHH-------HHHHHH-TTTCEEEEEEECCCCCSCC--CTTHHHHHHHHHHHSTTS------SCCCHH
T ss_pred             HHHHHHHHHHHHHHH-------HHHHhc-ccCcEEEEEEeCcccCchhhcccchHHHHHHHHhcCCCC------CCcCHH
Confidence            455554332222211       111111 248999999999999885432111111111 11122221      367899


Q ss_pred             HHHHHHHHHhcCCC--CCc-eEEeeCCC
Q 017977          268 DIVNLIYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       268 D~a~a~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      |+|++++.++....  ..| .+++.++.
T Consensus       239 dva~~~~~l~s~~~~~~tG~~~~vdgg~  266 (285)
T 2p91_A          239 DVGDTAVFLCSDWARAITGEVVHVDNGY  266 (285)
T ss_dssp             HHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHHcCCcccCCCCCEEEECCCc
Confidence            99999999986433  334 78887763

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.84  E-value=7.7e-21  Score=163.47  Aligned_cols=219  Identities=16%  Similarity=0.101  Sum_probs=141.9

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEE-eCCCCcccccCC----CCCccccCcccccCcchHHhhcc-------CCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVL-TRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GST  118 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~d  118 (363)
                      ++|+||||+|+||++++++|+++|++|+++ .|+....+....    .........+|+.|.+++.++++       ++|
T Consensus         2 k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   81 (244)
T 1edo_A            2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID   81 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            589999999999999999999999999995 777544322111    01112244579999988887775       689


Q ss_pred             EEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhh
Q 017977          119 AVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAK  193 (363)
Q Consensus       119 ~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~  193 (363)
                      +|||+||.....   ....+..+..+++|+.++.++++++.+.  ..+..++|++||.++.++       .+....|..+
T Consensus        82 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-------~~~~~~Y~~s  154 (244)
T 1edo_A           82 VVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIG-------NIGQANYAAA  154 (244)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC-------CTTCHHHHHH
T ss_pred             EEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCC-------CCCCccchhh
Confidence            999999975432   2355667889999999999998888652  125678999999854443       2233445555


Q ss_pred             hhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc-cchHHHHHHHhCCCCCCCCCccccccHHHHHHH
Q 017977          194 VYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL  272 (363)
Q Consensus       194 ~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a  272 (363)
                      |.+...+.+      . ....+. ..+++++++||+.++++..... .....  ......++      ..+++++|+|++
T Consensus       155 K~a~~~~~~------~-la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~--~~~~~~~~------~~~~~~~dva~~  218 (244)
T 1edo_A          155 KAGVIGFSK------T-AAREGA-SRNINVNVVCPGFIASDMTAKLGEDMEK--KILGTIPL------GRTGQPENVAGL  218 (244)
T ss_dssp             HHHHHHHHH------H-HHHHHH-TTTEEEEEEEECSBCSHHHHTTCHHHHH--HHHTSCTT------CSCBCHHHHHHH
T ss_pred             HHHHHHHHH------H-HHHHhh-hcCCEEEEEeeCccccchhhhcChHHHH--HHhhcCCC------CCCCCHHHHHHH
Confidence            432222211      1 111111 2489999999999987632111 11111  11122222      247899999999


Q ss_pred             HHHHhcCCC---C-CceEEeeCCC
Q 017977          273 IYEALSNPS---Y-RGVINGTAPN  292 (363)
Q Consensus       273 ~~~~~~~~~---~-~g~~~i~~~~  292 (363)
                      ++.++..+.   . +..|++.++.
T Consensus       219 ~~~l~~~~~~~~~~G~~~~v~gG~  242 (244)
T 1edo_A          219 VEFLALSPAASYITGQAFTIDGGI  242 (244)
T ss_dssp             HHHHHHCSGGGGCCSCEEEESTTT
T ss_pred             HHHHhCCCccCCcCCCEEEeCCCc
Confidence            999984432   2 3488888764

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.84  E-value=9.2e-21  Score=163.49  Aligned_cols=223  Identities=13%  Similarity=0.069  Sum_probs=139.0

Q ss_pred             CCCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCC-CCccccCcccccCcchHHhhcc---CCCEEEE
Q 017977           47 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ---GSTAVVN  122 (363)
Q Consensus        47 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~---~~d~Vi~  122 (363)
                      ....++||||||+|+||+++++.|+++|++|++++|+.......... ........+|+.+.+++.++++   ++|+|||
T Consensus        11 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~   90 (249)
T 3f9i_A           11 DLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKTSNLDILVC   90 (249)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTCSCCSEEEE
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhcCCCCEEEE
Confidence            34457999999999999999999999999999999987654432211 0111244578888888887776   6899999


Q ss_pred             ccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhc
Q 017977          123 LAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCL  197 (363)
Q Consensus       123 ~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~  197 (363)
                      +||.....   ....+..+..+++|+.++.++++++.+.  ..+..++|++||..+.++       .+....|..+|.+.
T Consensus        91 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-------~~~~~~Y~~sK~a~  163 (249)
T 3f9i_A           91 NAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAG-------NPGQANYCASKAGL  163 (249)
T ss_dssp             CCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--C-------CSCSHHHHHHHHHH
T ss_pred             CCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccC-------CCCCchhHHHHHHH
Confidence            99975332   2344567889999999999998887532  134567999999854332       23334555554332


Q ss_pred             ccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCccc-chHHHHHHHhCCCCCCCCCccccccHHHHHHHHHHH
Q 017977          198 VSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALA-KMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEA  276 (363)
Q Consensus       198 ~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~  276 (363)
                      ..+.+       .....+. ..|+++++++||.+.++...... ....  ......+      ...+.+++|+|++++.+
T Consensus       164 ~~~~~-------~la~e~~-~~gi~v~~v~PG~v~t~~~~~~~~~~~~--~~~~~~~------~~~~~~~~dva~~~~~l  227 (249)
T 3f9i_A          164 IGMTK-------SLSYEVA-TRGITVNAVAPGFIKSDMTDKLNEKQRE--AIVQKIP------LGTYGIPEDVAYAVAFL  227 (249)
T ss_dssp             HHHHH-------HHHHHHG-GGTEEEEEEEECCBC------CCHHHHH--HHHHHCT------TCSCBCHHHHHHHHHHH
T ss_pred             HHHHH-------HHHHHHH-HcCcEEEEEecCccccCcccccCHHHHH--HHHhcCC------CCCCcCHHHHHHHHHHH
Confidence            22211       1111111 23899999999999887543221 1111  1112222      23478899999999999


Q ss_pred             hcCCC---CCceEEeeCCC
Q 017977          277 LSNPS---YRGVINGTAPN  292 (363)
Q Consensus       277 ~~~~~---~~g~~~i~~~~  292 (363)
                      +....   .+..+++.+|.
T Consensus       228 ~s~~~~~~tG~~~~vdgG~  246 (249)
T 3f9i_A          228 ASNNASYITGQTLHVNGGM  246 (249)
T ss_dssp             HSGGGTTCCSCEEEESTTS
T ss_pred             cCCccCCccCcEEEECCCE
Confidence            97543   24488888775

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.84  E-value=1.6e-20  Score=164.22  Aligned_cols=222  Identities=14%  Similarity=0.067  Sum_probs=142.8

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCccccc----CCCCCccccCcccccCcchHHhhcc-------CC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (363)
                      .+++|+||||+|+||++++++|+++|++|++++|+.......    .... ......+|+.|.+++.++++       ++
T Consensus        28 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  106 (276)
T 2b4q_A           28 AGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG-DCQAIPADLSSEAGARRLAQALGELSARL  106 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSS-CEEECCCCTTSHHHHHHHHHHHHHHCSCC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-ceEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            456899999999999999999999999999999987543321    1111 22245689999988877665       68


Q ss_pred             CEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCC----CCeEEEeccceecCCcccccccCCCc
Q 017977          118 TAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGV----RPSVLELVKPKYLMRAAHQEMITWLS  188 (363)
Q Consensus       118 d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~----~~~v~~SS~~~~yg~~~~~e~~~~~~  188 (363)
                      |+|||+||.....   ....+..+..+++|+.++.++++++.+.  ..+.    .++|++||.++..+       .+...
T Consensus       107 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~-------~~~~~  179 (276)
T 2b4q_A          107 DILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISA-------MGEQA  179 (276)
T ss_dssp             SEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCC-------CCCSC
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCC-------CCCCc
Confidence            9999999974332   2345667889999999998887776532  0233    68999999843222       12223


Q ss_pred             -chhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc-cchHHHHHHHhCCCCCCCCCccccccH
Q 017977          189 -DYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAGGPLGSGQQWFSWIHL  266 (363)
Q Consensus       189 -~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v  266 (363)
                       .|..+|.+...+.++       ....+. ..|+++++++|+.+.++..... ......+......++      ..+.++
T Consensus       180 ~~Y~asK~a~~~~~~~-------la~e~~-~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------~r~~~p  245 (276)
T 2b4q_A          180 YAYGPSKAALHQLSRM-------LAKELV-GEHINVNVIAPGRFPSRMTRHIANDPQALEADSASIPM------GRWGRP  245 (276)
T ss_dssp             TTHHHHHHHHHHHHHH-------HHHHHG-GGTEEEEEEEECCCCSTTTHHHHHCHHHHHHHHHTSTT------SSCCCH
T ss_pred             cccHHHHHHHHHHHHH-------HHHHhc-ccCeEEEEEEeccCcCcchhhcchhHHHHHHhhcCCCC------CCcCCH
Confidence             455554332222211       111111 2389999999999988743211 111111111002222      237899


Q ss_pred             HHHHHHHHHHhcCCC--CCc-eEEeeCCC
Q 017977          267 DDIVNLIYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       267 ~D~a~a~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      +|+|++++.++..+.  ..| .+++.+|.
T Consensus       246 ~dvA~~v~~l~s~~~~~~tG~~i~vdGG~  274 (276)
T 2b4q_A          246 EEMAALAISLAGTAGAYMTGNVIPIDGGF  274 (276)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence            999999999987543  344 77777763

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.84  E-value=4.1e-20  Score=159.29  Aligned_cols=216  Identities=16%  Similarity=0.085  Sum_probs=135.8

Q ss_pred             CCCCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhh---ccCCCEEEE
Q 017977           46 QKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC---IQGSTAVVN  122 (363)
Q Consensus        46 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~---~~~~d~Vi~  122 (363)
                      ....+++|+||||+|+||++++++|+++|++|++++|+......+ .   ..... +|+  .++++.+   +.++|+|||
T Consensus        15 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~-~---~~~~~-~D~--~~~~~~~~~~~~~iD~lv~   87 (249)
T 1o5i_A           15 LGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRS-G---HRYVV-CDL--RKDLDLLFEKVKEVDILVL   87 (249)
T ss_dssp             -CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHT-C---SEEEE-CCT--TTCHHHHHHHSCCCSEEEE
T ss_pred             hccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHhh-C---CeEEE-eeH--HHHHHHHHHHhcCCCEEEE
Confidence            444567999999999999999999999999999999987433322 1   11233 677  3344444   348999999


Q ss_pred             ccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHH----HHhCCCCCCCeEEEeccceecCCcccccccCCCcchhhhhh
Q 017977          123 LAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDL----INESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVY  195 (363)
Q Consensus       123 ~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~----~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~  195 (363)
                      +||.....   ....+..+..+++|+.++.++.++    +.+  .+..++|++||.+ .+.      ..+....|..+|.
T Consensus        88 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~~~g~iv~isS~~-~~~------~~~~~~~Y~~sK~  158 (249)
T 1o5i_A           88 NAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKE--KGWGRIVAITSFS-VIS------PIENLYTSNSARM  158 (249)
T ss_dssp             CCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCEEEEEECCGG-GTS------CCTTBHHHHHHHH
T ss_pred             CCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH--cCCcEEEEEcchH-hcC------CCCCCchHHHHHH
Confidence            99974332   234566788999999997766554    444  4667899999984 332      1122334555543


Q ss_pred             hcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc-cchHHHHHHHhCCCCCCCCCccccccHHHHHHHHH
Q 017977          196 CLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY  274 (363)
Q Consensus       196 ~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~  274 (363)
                      +...+.+      . ....+. ..|+++++++|+.+.++..... ..... .......++      ..+++++|+|++++
T Consensus       159 a~~~~~~------~-la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~-~~~~~~~p~------~~~~~~~dvA~~i~  223 (249)
T 1o5i_A          159 ALTGFLK------T-LSFEVA-PYGITVNCVAPGWTETERVKELLSEEKK-KQVESQIPM------RRMAKPEEIASVVA  223 (249)
T ss_dssp             HHHHHHH------H-HHHHHG-GGTEEEEEEEECSBCCTTHHHHSCHHHH-HHHHTTSTT------SSCBCHHHHHHHHH
T ss_pred             HHHHHHH------H-HHHHhh-hcCeEEEEEeeCCCccCcccccchhhHH-HHHHhcCCC------CCCcCHHHHHHHHH
Confidence            3222211      0 111111 2389999999999998753211 11111 011112222      24789999999999


Q ss_pred             HHhcCCC--CCc-eEEeeCCC
Q 017977          275 EALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       275 ~~~~~~~--~~g-~~~i~~~~  292 (363)
                      .++....  ..| .+++.+|.
T Consensus       224 ~l~s~~~~~~tG~~~~vdgG~  244 (249)
T 1o5i_A          224 FLCSEKASYLTGQTIVVDGGL  244 (249)
T ss_dssp             HHHSGGGTTCCSCEEEESTTC
T ss_pred             HHcCccccCCCCCEEEECCCc
Confidence            9987533  334 88887764

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.84  E-value=1.1e-20  Score=164.72  Aligned_cols=225  Identities=14%  Similarity=0.087  Sum_probs=142.9

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCC------CCccccCcccccCcchHHhhcc-------
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG------KKTRFFPGVMIAEEPQWRDCIQ-------  115 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~~~-------  115 (363)
                      .+++++||||+|+||+++++.|+++|++|++++|+..+.......      ........+|+.|.+++.++++       
T Consensus        12 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   91 (267)
T 1iy8_A           12 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG   91 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            447899999999999999999999999999999987553322100      1112244579999988887765       


Q ss_pred             CCCEEEEccCCCCC-C---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcc
Q 017977          116 GSTAVVNLAGTPIG-T---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSD  189 (363)
Q Consensus       116 ~~d~Vi~~a~~~~~-~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~  189 (363)
                      ++|+|||+||.... .   ....+..+..+++|+.++.++.+++.+.  ..+..++|++||..+..+       .+....
T Consensus        92 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------~~~~~~  164 (267)
T 1iy8_A           92 RIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRG-------IGNQSG  164 (267)
T ss_dssp             CCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSB-------CSSBHH
T ss_pred             CCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccC-------CCCCcc
Confidence            68999999997432 1   2345667889999999988666655331  145678999999844222       223345


Q ss_pred             hhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc-----cchHHH-H-HHHhCCCCCCCCCccc
Q 017977          190 YCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL-----AKMIPL-F-MMFAGGPLGSGQQWFS  262 (363)
Q Consensus       190 ~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~-----~~~~~~-~-~~~~~~~~~~~~~~~~  262 (363)
                      |..+|.+...+.++       ....+. ..|+++++++||.+.++.....     ...... . ......++      ..
T Consensus       165 Y~asK~a~~~~~~~-------la~e~~-~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~------~r  230 (267)
T 1iy8_A          165 YAAAKHGVVGLTRN-------SAVEYG-RYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPS------KR  230 (267)
T ss_dssp             HHHHHHHHHHHHHH-------HHHHHG-GGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTT------CS
T ss_pred             HHHHHHHHHHHHHH-------HHHHHH-hcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhccCCC------CC
Confidence            55554332222211       111111 2389999999999987631110     011110 0 11111121      23


Q ss_pred             cccHHHHHHHHHHHhcCCC--CCc-eEEeeCCCCc
Q 017977          263 WIHLDDIVNLIYEALSNPS--YRG-VINGTAPNPV  294 (363)
Q Consensus       263 ~i~v~D~a~a~~~~~~~~~--~~g-~~~i~~~~~~  294 (363)
                      +.+++|+|++++.++..+.  ..| .+++.+|...
T Consensus       231 ~~~~~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~~  265 (267)
T 1iy8_A          231 YGEAPEIAAVVAFLLSDDASYVNATVVPIDGGQSA  265 (267)
T ss_dssp             CBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTT
T ss_pred             CcCHHHHHHHHHHHcCccccCCCCCEEEECCCccc
Confidence            7899999999999987542  344 7888777543

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.84  E-value=2.7e-20  Score=162.19  Aligned_cols=218  Identities=13%  Similarity=0.080  Sum_probs=143.2

Q ss_pred             CCCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc-------CCCE
Q 017977           47 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTA  119 (363)
Q Consensus        47 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~  119 (363)
                      ...+++||||||+|+||+++++.|+++|++|++++|+.......      .....+|+.|.+++.++++       ++|+
T Consensus        11 ~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~------~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   84 (269)
T 3vtz_A           11 EFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNV------SDHFKIDVTNEEEVKEAVEKTTKKYGRIDI   84 (269)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CTTS------SEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhccCc------eeEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            34457999999999999999999999999999999987654321      1145689999988887765       7899


Q ss_pred             EEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhhh
Q 017977          120 VVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKV  194 (363)
Q Consensus       120 Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~  194 (363)
                      |||+||.....   ..+.+..+..+++|+.++.++++++.+.  ..+..++|++||..+..+       .+....|..+|
T Consensus        85 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-------~~~~~~Y~asK  157 (269)
T 3vtz_A           85 LVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAA-------TKNAAAYVTSK  157 (269)
T ss_dssp             EEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSB-------CTTCHHHHHHH
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccC-------CCCChhHHHHH
Confidence            99999975332   2345567788999999999998886642  135567999999843221       22334555554


Q ss_pred             hhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc--------cch-HHHH-HHHhCCCCCCCCCccccc
Q 017977          195 YCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL--------AKM-IPLF-MMFAGGPLGSGQQWFSWI  264 (363)
Q Consensus       195 ~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~--------~~~-~~~~-~~~~~~~~~~~~~~~~~i  264 (363)
                      .+...+.+         ....+...++++.+++||.+.++.....        ... .... ......++      ..+.
T Consensus       158 aa~~~l~~---------~la~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~------~r~~  222 (269)
T 3vtz_A          158 HALLGLTR---------SVAIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPM------GRIG  222 (269)
T ss_dssp             HHHHHHHH---------HHHHHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHSTT------SSCB
T ss_pred             HHHHHHHH---------HHHHHhcCCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcCCC------CCCc
Confidence            33222221         1111112279999999999987632110        000 0111 11112222      2478


Q ss_pred             cHHHHHHHHHHHhcCCC--CCc-eEEeeCCC
Q 017977          265 HLDDIVNLIYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       265 ~v~D~a~a~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      +++|+|++++.++....  ..| ++++.+|.
T Consensus       223 ~pedvA~~v~~L~s~~~~~itG~~i~vdGG~  253 (269)
T 3vtz_A          223 RPEEVAEVVAFLASDRSSFITGACLTVDGGL  253 (269)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             CHHHHHHHHHHHhCCccCCCcCcEEEECCCc
Confidence            89999999999987543  334 88888874

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.84  E-value=4.8e-20  Score=160.24  Aligned_cols=215  Identities=13%  Similarity=0.003  Sum_probs=140.5

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc-------CCCEEE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV  121 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~Vi  121 (363)
                      .+++||||||+|+||+++++.|+++|++|++++|+....       .......+|+.|.+++.++++       ++|+||
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~-------~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv   79 (264)
T 2dtx_A            7 RDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGE-------AKYDHIECDVTNPDQVKASIDHIFKEYGSISVLV   79 (264)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCCS-------CSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCcccC-------CceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            346899999999999999999999999999999987551       111245689999988887765       689999


Q ss_pred             EccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhhhhh
Q 017977          122 NLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYC  196 (363)
Q Consensus       122 ~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~  196 (363)
                      |+||.....   ..+.+..+..+++|+.++.++++++.+.  ..+..++|++||.++..+       .+....|..+|.+
T Consensus        80 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-------~~~~~~Y~~sK~a  152 (264)
T 2dtx_A           80 NNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASII-------TKNASAYVTSKHA  152 (264)
T ss_dssp             ECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSC-------CTTBHHHHHHHHH
T ss_pred             ECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccC-------CCCchhHHHHHHH
Confidence            999975332   2355677889999999998888888653  135678999999843221       2223345554432


Q ss_pred             cccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccc-----hH----HHH-HHHhCCCCCCCCCccccccH
Q 017977          197 LVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAK-----MI----PLF-MMFAGGPLGSGQQWFSWIHL  266 (363)
Q Consensus       197 ~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~-----~~----~~~-~~~~~~~~~~~~~~~~~i~v  266 (363)
                      ...+.++       ....+ ... +++++++||.+.++.......     ..    ... ......+.      ..++++
T Consensus       153 ~~~~~~~-------la~e~-~~~-i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~------~~~~~p  217 (264)
T 2dtx_A          153 VIGLTKS-------IALDY-APL-LRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPM------QRIGKP  217 (264)
T ss_dssp             HHHHHHH-------HHHHH-TTT-SEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHHHSTT------SSCBCH
T ss_pred             HHHHHHH-------HHHHh-cCC-cEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHhcCCC------CCCcCH
Confidence            2222110       01111 123 999999999997653111000     00    111 11111121      247899


Q ss_pred             HHHHHHHHHHhcCCC--CCc-eEEeeCCC
Q 017977          267 DDIVNLIYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       267 ~D~a~a~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      +|+|++++.++....  ..| .+++.++.
T Consensus       218 ~dvA~~v~~l~s~~~~~~tG~~i~vdGG~  246 (264)
T 2dtx_A          218 QEVASAVAFLASREASFITGTCLYVDGGL  246 (264)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHHHhCchhcCCCCcEEEECCCc
Confidence            999999999987543  344 77777763

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.84  E-value=2.6e-20  Score=161.72  Aligned_cols=227  Identities=14%  Similarity=0.077  Sum_probs=141.1

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCc-ccccCCC-----CCccccCcccccCcchHHhhcc-------
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK-AELIFPG-----KKTRFFPGVMIAEEPQWRDCIQ-------  115 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~-------  115 (363)
                      .+++|+||||+|+||+++++.|+++|++|++++|+... .......     ........+|+.|.+++.++++       
T Consensus         3 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   82 (260)
T 1x1t_A            3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG   82 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            34689999999999999999999999999999998765 3322110     1112244679999988887765       


Q ss_pred             CCCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcch
Q 017977          116 GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDY  190 (363)
Q Consensus       116 ~~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~  190 (363)
                      ++|+|||+||.....   ....+..+..+++|+.++.++++++.+.  ..+..++|++||..+.++       .+....|
T Consensus        83 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------~~~~~~Y  155 (260)
T 1x1t_A           83 RIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVA-------SANKSAY  155 (260)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-------CTTCHHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcC-------CCCCchH
Confidence            689999999974332   2355677889999999999988888542  135578999999844322       2233445


Q ss_pred             hhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc-cchHHH-----HHHHhCCCC-CCCCCcccc
Q 017977          191 CAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL-AKMIPL-----FMMFAGGPL-GSGQQWFSW  263 (363)
Q Consensus       191 ~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~-~~~~~~-----~~~~~~~~~-~~~~~~~~~  263 (363)
                      ..+|.+...+.++       ....+ ...|+++++++||.+.++..... ......     .....  .+ ........+
T Consensus       156 ~~sK~a~~~~~~~-------la~e~-~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~p~~~~  225 (260)
T 1x1t_A          156 VAAKHGVVGFTKV-------TALET-AGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAAR--ELLSEKQPSLQF  225 (260)
T ss_dssp             HHHHHHHHHHHHH-------HHHHH-TTTTEEEEEEEECCBCC--------------------------CHHHHCTTCCC
T ss_pred             HHHHHHHHHHHHH-------HHHHh-ccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHH--HHhhccCCCCCC
Confidence            5554322222110       11111 12389999999999988743211 000000     00000  00 000112347


Q ss_pred             ccHHHHHHHHHHHhcCCC--CCc-eEEeeCCC
Q 017977          264 IHLDDIVNLIYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       264 i~v~D~a~a~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      .+++|+|++++.++....  ..| .+++.+|.
T Consensus       226 ~~p~dva~~~~~l~s~~~~~~tG~~~~vdgG~  257 (260)
T 1x1t_A          226 VTPEQLGGTAVFLASDAAAQITGTTVSVDGGW  257 (260)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             cCHHHHHHHHHHHhChhhcCCCCCEEEECCCc
Confidence            899999999999987532  344 78877763

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.84  E-value=9.7e-21  Score=164.88  Aligned_cols=225  Identities=13%  Similarity=0.073  Sum_probs=143.4

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCC-----CCccccCcccccCcchHHhhcc-------CC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (363)
                      +++|+||||+|+||++++++|+++|++|++++|+..+.......     ........+|+.|.+++.++++       .+
T Consensus        14 ~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   93 (265)
T 1h5q_A           14 NKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPI   93 (265)
T ss_dssp             TEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCSE
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            46899999999999999999999999999999976543211100     1112245679999888877664       48


Q ss_pred             CEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--C-CCCCCeEEEeccceecCCcccccccCCCcchh
Q 017977          118 TAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--P-EGVRPSVLELVKPKYLMRAAHQEMITWLSDYC  191 (363)
Q Consensus       118 d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~-~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~  191 (363)
                      |+|||+||.....   ....+..+..+++|+.++.++++++.+.  . ...+++|++||..+.++.........+...|.
T Consensus        94 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~Y~  173 (265)
T 1h5q_A           94 SGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYN  173 (265)
T ss_dssp             EEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEECSCHHHH
T ss_pred             CEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccccccccccccccH
Confidence            9999999975332   2355667888999999999999988652  0 12367999999844333110000111123344


Q ss_pred             hhhhhcccchhhHHHHHHHHHHHhc--cCCCceEEEEeeceEEeCCCCcc-cchHHHHHHHhCCCCCCCCCccccccHHH
Q 017977          192 AKVYCLVSFNRGVLVCREWEGTALK--VNKDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAGGPLGSGQQWFSWIHLDD  268 (363)
Q Consensus       192 ~~~~~~~~y~~~k~~~~~~~~~~~~--~~~~~~~~ilRp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  268 (363)
                      .+          |.....+......  ...|++++++||+.++++..... .....  ......++      ..+++++|
T Consensus       174 ~s----------K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~--~~~~~~~~------~~~~~~~d  235 (265)
T 1h5q_A          174 SS----------KAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRD--HQASNIPL------NRFAQPEE  235 (265)
T ss_dssp             HH----------HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHH--HHHHTCTT------SSCBCGGG
T ss_pred             HH----------HHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccccchhHHH--HHHhcCcc------cCCCCHHH
Confidence            44          4332222222111  12389999999999998753221 11111  11122222      23789999


Q ss_pred             HHHHHHHHhcCCC--C-CceEEeeCCC
Q 017977          269 IVNLIYEALSNPS--Y-RGVINGTAPN  292 (363)
Q Consensus       269 ~a~a~~~~~~~~~--~-~g~~~i~~~~  292 (363)
                      +|++++.++..+.  . +..|++.+|.
T Consensus       236 va~~~~~l~~~~~~~~~G~~~~v~gG~  262 (265)
T 1h5q_A          236 MTGQAILLLSDHATYMTGGEYFIDGGQ  262 (265)
T ss_dssp             GHHHHHHHHSGGGTTCCSCEEEECTTG
T ss_pred             HHHHHHhhccCchhcCcCcEEEecCCE
Confidence            9999999987543  3 4488888874

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.84  E-value=2.7e-20  Score=162.69  Aligned_cols=223  Identities=13%  Similarity=0.066  Sum_probs=141.0

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccC----CCCCccccCcccccCcchHHhhc--------cC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCI--------QG  116 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~--------~~  116 (363)
                      .+++++||||+|+||++++++|+++|++|++++|+....+...    ..........+|+.|.+++.+++        .+
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   99 (273)
T 1ae1_A           20 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGK   99 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSC
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            3478999999999999999999999999999999875433211    11111224467999988887766        46


Q ss_pred             CCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchh
Q 017977          117 STAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYC  191 (363)
Q Consensus       117 ~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~  191 (363)
                      +|+|||+||.....   ....+..+..+++|+.++.++++++.+.  ..+..++|++||.++ +.      ..+....|.
T Consensus       100 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~-~~------~~~~~~~Y~  172 (273)
T 1ae1_A          100 LNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAG-FS------ALPSVSLYS  172 (273)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGG-TS------CCTTCHHHH
T ss_pred             CcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhh-cC------CCCCcchhH
Confidence            89999999975332   2355677889999999999999988531  134568999999843 22      122334555


Q ss_pred             hhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccc----hHHHH-HHHhCCCCCCCCCccccccH
Q 017977          192 AKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAK----MIPLF-MMFAGGPLGSGQQWFSWIHL  266 (363)
Q Consensus       192 ~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~i~v  266 (363)
                      .+|.+...+.++       ....+. ..|+++++++|+.++++.......    ..... ......++      ..+.++
T Consensus       173 asK~a~~~~~~~-------la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~------~r~~~p  238 (273)
T 1ae1_A          173 ASKGAINQMTKS-------LACEWA-KDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPM------GRAGKP  238 (273)
T ss_dssp             HHHHHHHHHHHH-------HHHHHG-GGTEEEEEEEECSBC-------------CHHHHHHHHHHSTT------CSCBCH
T ss_pred             HHHHHHHHHHHH-------HHHHHh-hcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcCCC------CCCcCH
Confidence            554332222211       111111 238999999999999885321100    00011 11111222      237899


Q ss_pred             HHHHHHHHHHhcCCC--CCc-eEEeeCCC
Q 017977          267 DDIVNLIYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       267 ~D~a~a~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      +|+|++++.++....  ..| ++++.+|.
T Consensus       239 ~dvA~~v~~l~s~~~~~~tG~~i~vdGG~  267 (273)
T 1ae1_A          239 QEVSALIAFLCFPAASYITGQIIWADGGF  267 (273)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHHHhCccccCcCCCEEEECCCc
Confidence            999999999986532  334 78887764

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.84  E-value=3.3e-21  Score=172.50  Aligned_cols=236  Identities=17%  Similarity=0.089  Sum_probs=154.6

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCC----------CCccccc----CCCCCccccCcccccCcchHHhh
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRS----------RSKAELI----FPGKKTRFFPGVMIAEEPQWRDC  113 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~----------~~~~~~~----~~~~~~~~~~~~d~~~~~~~~~~  113 (363)
                      ..+++||||||+|+||+++++.|+++|++|++++|+          ....+..    ...........+|+.|.+++.++
T Consensus        25 l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~  104 (322)
T 3qlj_A           25 VDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGL  104 (322)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            445789999999999999999999999999999987          2222111    11111222456899999888777


Q ss_pred             cc-------CCCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC-C-C------CCCCeEEEeccceec
Q 017977          114 IQ-------GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES-P-E------GVRPSVLELVKPKYL  175 (363)
Q Consensus       114 ~~-------~~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~------~~~~~v~~SS~~~~y  175 (363)
                      ++       ++|+|||+||.....   ..+.+..+..+++|+.++.++++++... . .      ...++|++||..+..
T Consensus       105 ~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~  184 (322)
T 3qlj_A          105 IQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQ  184 (322)
T ss_dssp             HHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHHH
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHcc
Confidence            65       789999999975432   3456677889999999999999887642 0 0      014799999985433


Q ss_pred             CCcccccccCCCcchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCc-ccchHHHHHHHhCCCC
Q 017977          176 MRAAHQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA-LAKMIPLFMMFAGGPL  254 (363)
Q Consensus       176 g~~~~~e~~~~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~-~~~~~~~~~~~~~~~~  254 (363)
                      +       .+....|..+|.+...+.++       ....+. ..|+++..++|+ +..+.... .....           
T Consensus       185 ~-------~~~~~~Y~asKaal~~l~~~-------la~e~~-~~gI~vn~v~PG-~~t~~~~~~~~~~~-----------  237 (322)
T 3qlj_A          185 G-------SVGQGNYSAAKAGIATLTLV-------GAAEMG-RYGVTVNAIAPS-ARTRMTETVFAEMM-----------  237 (322)
T ss_dssp             C-------BTTCHHHHHHHHHHHHHHHH-------HHHHHG-GGTEEEEEEEEC-TTSCCSCCSCCC-------------
T ss_pred             C-------CCCCccHHHHHHHHHHHHHH-------HHHHhc-ccCcEEEEecCC-CCCccchhhhhhhh-----------
Confidence            3       23334566554333222211       111111 238999999999 65443211 11110           


Q ss_pred             CCCCCccccccHHHHHHHHHHHhcCCC---CCceEEeeCCCCc-----------------CHHHHHHHHHHHhCCC
Q 017977          255 GSGQQWFSWIHLDDIVNLIYEALSNPS---YRGVINGTAPNPV-----------------RLAEMCDHLGNVLGRP  310 (363)
Q Consensus       255 ~~~~~~~~~i~v~D~a~a~~~~~~~~~---~~g~~~i~~~~~~-----------------s~~el~~~i~~~~g~~  310 (363)
                      ......+.++.++|+|++++.++....   .+..+++.+|...                 ++.|+++.+.+.+|.+
T Consensus       238 ~~~~~~~~~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~  313 (322)
T 3qlj_A          238 ATQDQDFDAMAPENVSPLVVWLGSAEARDVTGKVFEVEGGKIRVAEGWAHGPQIDKGARWDPAELGPVVADLLGKA  313 (322)
T ss_dssp             ------CCTTCGGGTHHHHHHHTSGGGGGCCSCEEEEETTEEEEEECCEEEEEEECSSCCCGGGHHHHHHHHHHHS
T ss_pred             hccccccCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccccCCCcccccccCccCCCCHHHHHHHHHHHhhcc
Confidence            011122346789999999999986544   3348888877543                 7799999999999865

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.84  E-value=3.6e-20  Score=163.67  Aligned_cols=227  Identities=10%  Similarity=-0.020  Sum_probs=150.5

Q ss_pred             CCCccEEEEecCcc--hHHHHHHHHHHhCCCEEEEEeCCCCcccccC---CCCCccccCcccccCcchHHhhcc------
Q 017977           47 KASQMTVSVTGATG--FIGRRLVQRLQADNHQVRVLTRSRSKAELIF---PGKKTRFFPGVMIAEEPQWRDCIQ------  115 (363)
Q Consensus        47 ~~~~~~vlVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~d~~~~~~~~~~~~------  115 (363)
                      ...+++++||||+|  +||+++++.|+++|++|++++|+....+...   ..........+|+.|.+++.++++      
T Consensus        27 ~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  106 (296)
T 3k31_A           27 LMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEW  106 (296)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            34557999999998  9999999999999999999999864322111   110111255689999988887765      


Q ss_pred             -CCCEEEEccCCCCC-------CCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCC
Q 017977          116 -GSTAVVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWL  187 (363)
Q Consensus       116 -~~d~Vi~~a~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~  187 (363)
                       ++|++||+||....       ...+.+..+..+++|+.++.++++++........++|++||.++..+       .+..
T Consensus       107 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~-------~~~~  179 (296)
T 3k31_A          107 GSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKV-------VPHY  179 (296)
T ss_dssp             SCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSC-------CTTT
T ss_pred             CCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccC-------CCCc
Confidence             68999999997431       23456678889999999999999999874222347999999854322       2333


Q ss_pred             cchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHH-HHHhCCCCCCCCCccccccH
Q 017977          188 SDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHL  266 (363)
Q Consensus       188 ~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v  266 (363)
                      ..|..+|.+...+.++       ....+. ..|+++..++||.+.++............ ......+++      .+..+
T Consensus       180 ~~Y~asKaal~~l~~~-------la~e~~-~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~------r~~~p  245 (296)
T 3k31_A          180 NVMGVCKAALEASVKY-------LAVDLG-KQQIRVNAISAGPVRTLASSGISDFHYILTWNKYNSPLR------RNTTL  245 (296)
T ss_dssp             THHHHHHHHHHHHHHH-------HHHHHH-TTTEEEEEEEECCCCCSSCCSCHHHHHHHHHHHHHSTTS------SCCCH
T ss_pred             hhhHHHHHHHHHHHHH-------HHHHHh-hcCcEEEEEEECCCcCchhhcccchHHHHHHHHhcCCCC------CCCCH
Confidence            4566655443333221       111111 23899999999999987543322111111 111222222      36789


Q ss_pred             HHHHHHHHHHhcCCC--CCc-eEEeeCCCCc
Q 017977          267 DDIVNLIYEALSNPS--YRG-VINGTAPNPV  294 (363)
Q Consensus       267 ~D~a~a~~~~~~~~~--~~g-~~~i~~~~~~  294 (363)
                      +|+|++++.++....  ..| ++++.+|..+
T Consensus       246 edvA~~v~fL~s~~a~~itG~~i~vdGG~~~  276 (296)
T 3k31_A          246 DDVGGAALYLLSDLGRGTTGETVHVDCGYHV  276 (296)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHHHHcCCccCCccCCEEEECCCccc
Confidence            999999999997533  344 8888887543

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.84  E-value=8.6e-21  Score=164.31  Aligned_cols=221  Identities=15%  Similarity=0.079  Sum_probs=142.0

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCC----CCCccccCcccccCcchHHhhcc-------CCCE
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GSTA  119 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~d~  119 (363)
                      ++++||||+|+||++++++|+++|++|++++|+....+....    .........+|+.|.+++.++++       ++|+
T Consensus         3 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   82 (256)
T 1geg_A            3 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV   82 (256)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            689999999999999999999999999999998754332211    11112244679999988887775       7999


Q ss_pred             EEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCC-CCCeEEEeccceecCCcccccccCCCcchhhh
Q 017977          120 VVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLELVKPKYLMRAAHQEMITWLSDYCAK  193 (363)
Q Consensus       120 Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~-~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~  193 (363)
                      |||+||.....   ....+..+..+++|+.++.++++++.+.  ..+ ..++|++||..+.++       .+....|..+
T Consensus        83 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------~~~~~~Y~as  155 (256)
T 1geg_A           83 IVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVG-------NPELAVYSSS  155 (256)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC-------CTTBHHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCC-------CCCchhHHHH
Confidence            99999974332   2345667889999999998888777652  123 467999999854333       2223345555


Q ss_pred             hhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccc---------hHHHHH-HHhCCCCCCCCCcccc
Q 017977          194 VYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAK---------MIPLFM-MFAGGPLGSGQQWFSW  263 (363)
Q Consensus       194 ~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~---------~~~~~~-~~~~~~~~~~~~~~~~  263 (363)
                      |.+...+.+      .+.. .+. ..|+++++++||.+.++.......         .-.... .....+      ...+
T Consensus       156 K~a~~~~~~------~la~-e~~-~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p------~~r~  221 (256)
T 1geg_A          156 KFAVRGLTQ------TAAR-DLA-PLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRIT------LGRL  221 (256)
T ss_dssp             HHHHHHHHH------HHHH-HHG-GGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCT------TCSC
T ss_pred             HHHHHHHHH------HHHH-HHH-HcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHhcCC------CCCC
Confidence            433222221      1111 111 238999999999998763111000         000001 111111      1247


Q ss_pred             ccHHHHHHHHHHHhcCCC--CCc-eEEeeCCC
Q 017977          264 IHLDDIVNLIYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       264 i~v~D~a~a~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      .+++|+|++++.++....  ..| .+++.+|.
T Consensus       222 ~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~  253 (256)
T 1geg_A          222 SEPEDVAACVSYLASPDSDYMTGQSLLIDGGM  253 (256)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESSSS
T ss_pred             cCHHHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence            899999999999987542  344 77777764

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.84  E-value=2.2e-20  Score=162.65  Aligned_cols=222  Identities=15%  Similarity=0.046  Sum_probs=143.0

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCC-----CCCccccCcccccCcchHHhhcc-------C
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP-----GKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (363)
                      .+++|+||||+|+||+++++.|+++|++|++++|+.........     .........+|+.|.+++.++++       +
T Consensus        20 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   99 (267)
T 1vl8_A           20 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGK   99 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            34689999999999999999999999999999998754332110     01112244579999988877765       6


Q ss_pred             CCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccc-eecCCcccccccCCCcch
Q 017977          117 STAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKP-KYLMRAAHQEMITWLSDY  190 (363)
Q Consensus       117 ~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~-~~yg~~~~~e~~~~~~~~  190 (363)
                      +|+|||+||.....   ....+..+..+++|+.++.++++++.+.  ..+.+++|++||.+ +..+       .+....|
T Consensus       100 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~-------~~~~~~Y  172 (267)
T 1vl8_A          100 LDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVT-------MPNISAY  172 (267)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCC-------SSSCHHH
T ss_pred             CCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccC-------CCCChhH
Confidence            89999999975332   2345667889999999999998887542  14567899999984 3221       2233355


Q ss_pred             hhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHH-HHHhCCCCCCCCCccccccHHHH
Q 017977          191 CAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDI  269 (363)
Q Consensus       191 ~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~  269 (363)
                      ..+|.+...+.++       ....+. ..|+++++++||.+.++.......--... ......++      ..+++++|+
T Consensus       173 ~asK~a~~~~~~~-------la~e~~-~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------~~~~~p~dv  238 (267)
T 1vl8_A          173 AASKGGVASLTKA-------LAKEWG-RYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPL------GRTGVPEDL  238 (267)
T ss_dssp             HHHHHHHHHHHHH-------HHHHHG-GGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTT------SSCBCGGGG
T ss_pred             HHHHHHHHHHHHH-------HHHHhc-ccCeEEEEEEeccCccccccccccChHHHHHHHhhCCC------CCCcCHHHH
Confidence            5554332222211       111111 23899999999999877432110000111 11122222      237889999


Q ss_pred             HHHHHHHhcCCC--CCc-eEEeeCC
Q 017977          270 VNLIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       270 a~a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      |++++.++....  ..| .+.+.+|
T Consensus       239 A~~v~~l~s~~~~~itG~~i~vdGG  263 (267)
T 1vl8_A          239 KGVAVFLASEEAKYVTGQIIFVDGG  263 (267)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHcCccccCCcCCeEEECCC
Confidence            999999987542  345 7777765

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.84  E-value=1e-20  Score=164.66  Aligned_cols=225  Identities=15%  Similarity=0.093  Sum_probs=146.9

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCC-----CCCccccCcccccCcchHHhhcc-------
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP-----GKKTRFFPGVMIAEEPQWRDCIQ-------  115 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~d~~~~~~~~~~~~-------  115 (363)
                      ..+++||||||+|+||+++++.|+++|++|++++|+.++.+....     .........+|+.|.+++.++++       
T Consensus        18 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   97 (266)
T 4egf_A           18 LDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFG   97 (266)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            345789999999999999999999999999999998765432211     01112245689999998877765       


Q ss_pred             CCCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCC-CCCeEEEeccceecCCcccccccCCCcc
Q 017977          116 GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLELVKPKYLMRAAHQEMITWLSD  189 (363)
Q Consensus       116 ~~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~-~~~~v~~SS~~~~yg~~~~~e~~~~~~~  189 (363)
                      ++|+|||+||.....   ..+.+..+..+++|+.++.++++++.+.  ..+ ..++|++||..+..+       .+....
T Consensus        98 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~-------~~~~~~  170 (266)
T 4egf_A           98 GLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAP-------LPDHYA  170 (266)
T ss_dssp             SCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC-------CTTCHH
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccC-------CCCChH
Confidence            789999999975432   2355667889999999999998888652  012 457999999843222       223345


Q ss_pred             hhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHH-HHHHhCCCCCCCCCccccccHHH
Q 017977          190 YCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPL-FMMFAGGPLGSGQQWFSWIHLDD  268 (363)
Q Consensus       190 ~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~v~D  268 (363)
                      |..+|.+...+.++       ....+. ..|+++..++||.+.++........... .......++      ..+..++|
T Consensus       171 Y~asK~a~~~l~~~-------la~e~~-~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------~r~~~p~d  236 (266)
T 4egf_A          171 YCTSKAGLVMATKV-------LARELG-PHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPL------GRFAVPHE  236 (266)
T ss_dssp             HHHHHHHHHHHHHH-------HHHHHG-GGTEEEEEEEESCBCSHHHHHHTCSHHHHHHHHTTCTT------SSCBCHHH
T ss_pred             HHHHHHHHHHHHHH-------HHHHHh-hhCeEEEEEEeCCCcCchhhhhccChHHHHHHHhcCCC------CCCcCHHH
Confidence            66554333322221       111111 2389999999999987632110000011 122222222      23688999


Q ss_pred             HHHHHHHHhcCCC--CCc-eEEeeCCCC
Q 017977          269 IVNLIYEALSNPS--YRG-VINGTAPNP  293 (363)
Q Consensus       269 ~a~a~~~~~~~~~--~~g-~~~i~~~~~  293 (363)
                      +|++++.++....  ..| ++++.+|..
T Consensus       237 va~~v~~L~s~~~~~itG~~i~vdGG~~  264 (266)
T 4egf_A          237 VSDAVVWLASDAASMINGVDIPVDGGYT  264 (266)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHHhCchhcCccCcEEEECCCcc
Confidence            9999999997543  344 888887743

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.84  E-value=5.2e-20  Score=161.40  Aligned_cols=232  Identities=13%  Similarity=0.050  Sum_probs=146.2

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCc------------ccc----cCCCCCccccCcccccCcchHH
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK------------AEL----IFPGKKTRFFPGVMIAEEPQWR  111 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~------------~~~----~~~~~~~~~~~~~d~~~~~~~~  111 (363)
                      ..+++||||||+|+||+++++.|+++|++|++++|+...            ...    +...........+|+.|.+++.
T Consensus        11 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   90 (278)
T 3sx2_A           11 LTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLS   90 (278)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHH
Confidence            345799999999999999999999999999999997321            110    0001111224568999999888


Q ss_pred             hhcc-------CCCEEEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhC--CC-CCCCeEEEeccceecCCcccc
Q 017977          112 DCIQ-------GSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES--PE-GVRPSVLELVKPKYLMRAAHQ  181 (363)
Q Consensus       112 ~~~~-------~~d~Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~-~~~~~v~~SS~~~~yg~~~~~  181 (363)
                      ++++       ++|+|||+||...... ..+..+..+++|+.++.++++++.+.  .. ...++|++||..+.++.   .
T Consensus        91 ~~~~~~~~~~g~id~lv~nAg~~~~~~-~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~---~  166 (278)
T 3sx2_A           91 AALQAGLDELGRLDIVVANAGIAPMSA-GDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGV---G  166 (278)
T ss_dssp             HHHHHHHHHHCCCCEEEECCCCCCCSS-THHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCC---C
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCC---c
Confidence            7775       7899999999754332 56778899999999999999987652  01 24579999998544331   0


Q ss_pred             cccCCCcchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc--cchHHHHHHHhC--CCCCCC
Q 017977          182 EMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL--AKMIPLFMMFAG--GPLGSG  257 (363)
Q Consensus       182 e~~~~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~--~~~~~~~~~~~~--~~~~~~  257 (363)
                      ...+....|..+|.+...+.+       .....+. ..|++++.++||.|.++.....  ............  ..+...
T Consensus       167 ~~~~~~~~Y~asKaa~~~~~~-------~la~e~~-~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (278)
T 3sx2_A          167 SADPGSVGYVAAKHGVVGLMR-------VYANLLA-GQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNA  238 (278)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHH-------HHHHHHG-GGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--CTTSCS
T ss_pred             cCCCCchHhHHHHHHHHHHHH-------HHHHHHh-ccCcEEEEEecCCccCccchhhhHHHHHhhccchhhhhhhhhhh
Confidence            011122234444322222211       0111111 2389999999999998854321  011111111111  112222


Q ss_pred             CCccccccHHHHHHHHHHHhcCCC--CCc-eEEeeCCC
Q 017977          258 QQWFSWIHLDDIVNLIYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       258 ~~~~~~i~v~D~a~a~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      .. ..+++++|+|++++.++....  ..| ++++.+|.
T Consensus       239 ~p-~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~  275 (278)
T 3sx2_A          239 MP-VEVLAPEDVANAVAWLVSDQARYITGVTLPVDAGF  275 (278)
T ss_dssp             SS-CSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred             cC-cCcCCHHHHHHHHHHHhCcccccccCCEEeECCCc
Confidence            22 568999999999999986543  344 88888764

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=99.84  E-value=8.1e-20  Score=154.36  Aligned_cols=220  Identities=13%  Similarity=0.087  Sum_probs=150.7

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc---CCCEEEEccC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ---GSTAVVNLAG  125 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~~d~Vi~~a~  125 (363)
                      .+|+++||||++.||+++++.|+++|++|++++|+.+........  ......+|+.|.++++++++   ++|++|||||
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~g~iDiLVNNAG   87 (242)
T 4b79_A           10 AGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPRHP--RIRREELDITDSQRLQRLFEALPRLDVLVNNAG   87 (242)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCCCT--TEEEEECCTTCHHHHHHHHHHCSCCSEEEECCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhhcC--CeEEEEecCCCHHHHHHHHHhcCCCCEEEECCC
Confidence            468999999999999999999999999999999988765543221  22244689999988887765   6899999999


Q ss_pred             CCCC-CCCChhhHHHHHHHHHHHHHHHHHHHHhC-CCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhcccchhh
Q 017977          126 TPIG-TRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRG  203 (363)
Q Consensus       126 ~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~~y~~~  203 (363)
                      ...+ ...+.+.++.++++|+.++..+.+++.++ +.+..++|++||..+..+       .+....|..+|.+...++++
T Consensus        88 i~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~-------~~~~~~Y~asKaav~~ltr~  160 (242)
T 4b79_A           88 ISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYSTFG-------SADRPAYSASKGAIVQLTRS  160 (242)
T ss_dssp             CCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGGTSC-------CSSCHHHHHHHHHHHHHHHH
T ss_pred             CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccccCC-------CCCCHHHHHHHHHHHHHHHH
Confidence            7533 23456678899999999998888877654 223357999999865333       34455777776655544432


Q ss_pred             HHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHH-HHHhCCCCCCCCCccccccHHHHHHHHHHHhcCCC-
Q 017977          204 VLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS-  281 (363)
Q Consensus       204 k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~-  281 (363)
                        ++.+     +. .+|+++..|.||.+..|.......-.... ......|++.      +..++|+|++++.++.... 
T Consensus       161 --lA~E-----la-~~gIrVNaV~PG~i~T~m~~~~~~~~~~~~~~~~~~PlgR------~g~peeiA~~v~fLaSd~a~  226 (242)
T 4b79_A          161 --LACE-----YA-AERIRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPLAR------WGEAPEVASAAAFLCGPGAS  226 (242)
T ss_dssp             --HHHH-----HG-GGTEEEEEEEECSBCCC-----CCCHHHHHHHHHTCTTCS------CBCHHHHHHHHHHHTSGGGT
T ss_pred             --HHHH-----hh-hcCeEEEEEEeCCCCChhhhcccCCHHHHHHHHhcCCCCC------CcCHHHHHHHHHHHhCchhc
Confidence              1111     11 23899999999999877432111111111 2334444432      6779999999999986544 


Q ss_pred             -CCc-eEEeeCC
Q 017977          282 -YRG-VINGTAP  291 (363)
Q Consensus       282 -~~g-~~~i~~~  291 (363)
                       ..| .+.+.+|
T Consensus       227 ~iTG~~l~VDGG  238 (242)
T 4b79_A          227 FVTGAVLAVDGG  238 (242)
T ss_dssp             TCCSCEEEESTT
T ss_pred             CccCceEEECcc
Confidence             345 6777665

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.84  E-value=1.9e-20  Score=161.94  Aligned_cols=230  Identities=15%  Similarity=0.003  Sum_probs=150.8

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCC-CCccccCcccccCcchHHhhcc-------CCCE
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTA  119 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~d~  119 (363)
                      ..+++++||||+|+||++++++|+++|++|++++|+.+..+..... ........+|+.|.+++.++++       ++|+
T Consensus         6 l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   85 (255)
T 4eso_A            6 YQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDL   85 (255)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            3457999999999999999999999999999999987654432211 1112245689999888776654       6899


Q ss_pred             EEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhhhhhh
Q 017977          120 VVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYC  196 (363)
Q Consensus       120 Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~  196 (363)
                      +||+||.....   ..+.+..+..+++|+.++.++++++.+......++|++||..+..+       .+....|..+|.+
T Consensus        86 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------~~~~~~Y~asKaa  158 (255)
T 4eso_A           86 LHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGG-------HPGMSVYSASKAA  158 (255)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSB-------CTTBHHHHHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCC-------CCCchHHHHHHHH
Confidence            99999975432   2356677889999999999999999874112347999999854222       2233455555433


Q ss_pred             cccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCc---ccchHHHH--HHHhCCCCCCCCCccccccHHHHHH
Q 017977          197 LVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA---LAKMIPLF--MMFAGGPLGSGQQWFSWIHLDDIVN  271 (363)
Q Consensus       197 ~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~---~~~~~~~~--~~~~~~~~~~~~~~~~~i~v~D~a~  271 (363)
                      ...+.++       ....+. ..|+++..++||.+.++....   .......+  ......++      ..+.+++|+|+
T Consensus       159 ~~~~~~~-------la~e~~-~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p~------~r~~~pedvA~  224 (255)
T 4eso_A          159 LVSFASV-------LAAELL-PRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPM------KRNGTADEVAR  224 (255)
T ss_dssp             HHHHHHH-------HHHHTG-GGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHSTT------SSCBCHHHHHH
T ss_pred             HHHHHHH-------HHHHHh-hhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccCCC------CCCcCHHHHHH
Confidence            2222211       111111 238999999999999875321   11111111  11111222      23678999999


Q ss_pred             HHHHHhcCCC-CCc-eEEeeCCCCcCHHH
Q 017977          272 LIYEALSNPS-YRG-VINGTAPNPVRLAE  298 (363)
Q Consensus       272 a~~~~~~~~~-~~g-~~~i~~~~~~s~~e  298 (363)
                      +++.++.... ..| .+++.+|...++.+
T Consensus       225 ~v~~L~s~~~~itG~~i~vdGG~~~~l~~  253 (255)
T 4eso_A          225 AVLFLAFEATFTTGAKLAVDGGLGQKLST  253 (255)
T ss_dssp             HHHHHHHTCTTCCSCEEEESTTTTTTBCC
T ss_pred             HHHHHcCcCcCccCCEEEECCCccccCcC
Confidence            9999987533 344 88998887665543

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.84  E-value=1.9e-20  Score=165.00  Aligned_cols=237  Identities=11%  Similarity=-0.001  Sum_probs=147.0

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCccc------------c----cCCCCCccccCcccccCcchHH
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE------------L----IFPGKKTRFFPGVMIAEEPQWR  111 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~------------~----~~~~~~~~~~~~~d~~~~~~~~  111 (363)
                      ..+++||||||+|+||+++++.|+++|++|++++|+.....            .    ............+|+.|.+++.
T Consensus         8 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   87 (287)
T 3pxx_A            8 VQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVS   87 (287)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHH
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHH
Confidence            44579999999999999999999999999999999732211            0    0111112224468999998887


Q ss_pred             hhcc-------CCCEEEEccCCCCCC-CCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC--Ccccc
Q 017977          112 DCIQ-------GSTAVVNLAGTPIGT-RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM--RAAHQ  181 (363)
Q Consensus       112 ~~~~-------~~d~Vi~~a~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg--~~~~~  181 (363)
                      ++++       ++|+|||+||..... ..+.+..+..+++|+.++.++++++.+......++|++||.++..+  ..+..
T Consensus        88 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  167 (287)
T 3pxx_A           88 RELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQPPGA  167 (287)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHCCC--
T ss_pred             HHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhcccccccccc
Confidence            7765       789999999974332 2456678899999999999999999874223457999999854433  22222


Q ss_pred             cccCCCcchhhhhhhcccchhhHHHHHHHHHHHhc-c-CCCceEEEEeeceEEeCCCCcccchHHHH----------HHH
Q 017977          182 EMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALK-V-NKDVRLALIRIGIVLGKDGGALAKMIPLF----------MMF  249 (363)
Q Consensus       182 e~~~~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~-~-~~~~~~~ilRp~~v~g~~~~~~~~~~~~~----------~~~  249 (363)
                      +..+.  +      ..+.|..+|.....+...... . ..|+++..++||.+.++....... ...+          ...
T Consensus       168 ~~~~~--~------~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~~~~~~  238 (287)
T 3pxx_A          168 GGPQG--P------GGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPM-YRQFRPDLEAPSRADAL  238 (287)
T ss_dssp             ---CH--H------HHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHH-HHHHCTTSSSCCHHHHH
T ss_pred             cccCC--C------ccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccch-hhhhccccccchhHHHH
Confidence            21110  0      112244444333222221111 1 238999999999999875432100 0000          000


Q ss_pred             hCCCCCCCCCccccccHHHHHHHHHHHhcCCC--CCc-eEEeeCCCCc
Q 017977          250 AGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS--YRG-VINGTAPNPV  294 (363)
Q Consensus       250 ~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~--~~g-~~~i~~~~~~  294 (363)
                      ...+. .......+.+++|+|++++.++....  ..| ++++.+|..+
T Consensus       239 ~~~~~-~~~~~~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG~~~  285 (287)
T 3pxx_A          239 LAFPA-MQAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAML  285 (287)
T ss_dssp             HHGGG-GCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             hhhhh-hcccCCCCCCHHHHHhhHheecchhhcCCCCceEeECchhhh
Confidence            00000 01111458999999999999996543  344 8888887543

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.84  E-value=4.5e-21  Score=166.30  Aligned_cols=220  Identities=12%  Similarity=0.063  Sum_probs=142.7

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCC-CCcccccCC----CCCccccCcccccCcchHHhhcc-------C
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRS-RSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (363)
                      .+|+|+||||+|+||++++++|+++|++|++++|+ ....+....    .........+|+.|.+++.++++       +
T Consensus         6 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   85 (258)
T 3afn_B            6 KGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFGG   85 (258)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            34789999999999999999999999999999998 554332111    11112244579999998888776       7


Q ss_pred             CCEEEEccCC-CCC---CCCChhhHHHHHHHHHHHHHHHHHHHHhC-C-CC--C---CCeEEEeccceecCCcccccccC
Q 017977          117 STAVVNLAGT-PIG---TRWSSEIKKEIKESRIRVTSKVVDLINES-P-EG--V---RPSVLELVKPKYLMRAAHQEMIT  185 (363)
Q Consensus       117 ~d~Vi~~a~~-~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~~--~---~~~v~~SS~~~~yg~~~~~e~~~  185 (363)
                      +|+|||+||. ...   .....+..+..+++|+.++.++++++.+. . .+  .   .++|++||..+..      ...+
T Consensus        86 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~------~~~~  159 (258)
T 3afn_B           86 IDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHT------GGGP  159 (258)
T ss_dssp             CSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHH------CCCT
T ss_pred             CCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhcc------CCCC
Confidence            9999999996 222   12345567788999999999998877542 0 12  2   5789998873311      0122


Q ss_pred             CCcchhhhhhhcccchhhHHHHHHHHHHHhc--cCCCceEEEEeeceEEeCCCCcc-cchHHHHHHHhCCCCCCCCCccc
Q 017977          186 WLSDYCAKVYCLVSFNRGVLVCREWEGTALK--VNKDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAGGPLGSGQQWFS  262 (363)
Q Consensus       186 ~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~--~~~~~~~~ilRp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  262 (363)
                      +...|..+|          ............  ...|++++++||+.++++..... ..+..  ....+.++      ..
T Consensus       160 ~~~~Y~~sK----------~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~--~~~~~~~~------~~  221 (258)
T 3afn_B          160 GAGLYGAAK----------AFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADKTQDVRD--RISNGIPM------GR  221 (258)
T ss_dssp             TCHHHHHHH----------HHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTCCHHHHH--HHHTTCTT------CS
T ss_pred             CchHHHHHH----------HHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccccCHHHHH--HHhccCCC------Cc
Confidence            333455543          222222221111  12389999999999998753221 11111  12222222      35


Q ss_pred             cccHHHHHHHHHHHhcCCC---CCc-eEEeeCCC
Q 017977          263 WIHLDDIVNLIYEALSNPS---YRG-VINGTAPN  292 (363)
Q Consensus       263 ~i~v~D~a~a~~~~~~~~~---~~g-~~~i~~~~  292 (363)
                      +++++|+|++++.++....   ..| .|++.++.
T Consensus       222 ~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gg~  255 (258)
T 3afn_B          222 FGTAEEMAPAFLFFASHLASGYITGQVLDINGGQ  255 (258)
T ss_dssp             CBCGGGTHHHHHHHHCHHHHTTCCSEEEEESTTS
T ss_pred             CCCHHHHHHHHHHHhCcchhccccCCEEeECCCc
Confidence            8999999999999987532   234 88888764

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.84  E-value=1.5e-20  Score=164.30  Aligned_cols=221  Identities=14%  Similarity=0.047  Sum_probs=136.7

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEE-eCCCCccccc----CCCCCccccCcccccCcchHHhhcc-------C
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVL-TRSRSKAELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (363)
                      ++++|+||||+|+||++++++|+++|++|+++ .|+....+..    ...........+|+.|.+++.++++       +
T Consensus        25 ~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  104 (272)
T 4e3z_A           25 DTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFGR  104 (272)
T ss_dssp             CSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            45689999999999999999999999999887 5544332221    1111122245689999888877665       6


Q ss_pred             CCEEEEccCCCCC-C---CCChhhHHHHHHHHHHHHHHHHHHHHhC-C----CCCCCeEEEeccceecCCcccccccC-C
Q 017977          117 STAVVNLAGTPIG-T---RWSSEIKKEIKESRIRVTSKVVDLINES-P----EGVRPSVLELVKPKYLMRAAHQEMIT-W  186 (363)
Q Consensus       117 ~d~Vi~~a~~~~~-~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~----~~~~~~v~~SS~~~~yg~~~~~e~~~-~  186 (363)
                      +|+|||+||.... .   ..+.+..+..+++|+.++.++++++.+. .    .+..++|++||.++.++       .+ .
T Consensus       105 id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------~~~~  177 (272)
T 4e3z_A          105 LDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILG-------SATQ  177 (272)
T ss_dssp             CCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHC-------CTTT
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccC-------CCCC
Confidence            8999999997432 1   2356677889999999999999888763 1    13456999999854433       11 1


Q ss_pred             CcchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHH-HHHhCCCCCCCCCcccccc
Q 017977          187 LSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIH  265 (363)
Q Consensus       187 ~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~  265 (363)
                      ...|..+|.+...+.+       .....+. ..|+++++++||.+.++..... ...... ......      ....+.+
T Consensus       178 ~~~Y~asKaa~~~~~~-------~la~e~~-~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~~~------~~~~~~~  242 (272)
T 4e3z_A          178 YVDYAASKAAIDTFTI-------GLAREVA-AEGIRVNAVRPGIIETDLHASG-GLPDRAREMAPSV------PMQRAGM  242 (272)
T ss_dssp             CHHHHHHHHHHHHHHH-------HHHHHHG-GGTEEEEEEEECSBC-------------------CC------TTSSCBC
T ss_pred             cchhHHHHHHHHHHHH-------HHHHHHH-HcCcEEEEEecCCCcCCccccc-CChHHHHHHhhcC------CcCCCcC
Confidence            2345555432222211       0111111 2389999999999998743210 000000 111111      1233678


Q ss_pred             HHHHHHHHHHHhcCCC--CCc-eEEeeCC
Q 017977          266 LDDIVNLIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       266 v~D~a~a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      ++|+|++++.++....  ..| ++++.+|
T Consensus       243 ~edvA~~i~~l~s~~~~~~tG~~i~vdgG  271 (272)
T 4e3z_A          243 PEEVADAILYLLSPSASYVTGSILNVSGG  271 (272)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHHHHhCCccccccCCEEeecCC
Confidence            9999999999986543  334 8888776

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.84  E-value=2.6e-20  Score=163.47  Aligned_cols=228  Identities=14%  Similarity=0.061  Sum_probs=145.4

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCC-------------cccc----cCCCCCccccCcccccCcchH
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS-------------KAEL----IFPGKKTRFFPGVMIAEEPQW  110 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~-------------~~~~----~~~~~~~~~~~~~d~~~~~~~  110 (363)
                      ..+++++||||+|+||++++++|+++|++|++++|+..             ..+.    +...........+|+.|.+++
T Consensus        13 l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v   92 (280)
T 3pgx_A           13 LQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAAL   92 (280)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHH
Confidence            44578999999999999999999999999999998531             1111    111112222445799999888


Q ss_pred             Hhhcc-------CCCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCC-CCCeEEEeccceecCC
Q 017977          111 RDCIQ-------GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLELVKPKYLMR  177 (363)
Q Consensus       111 ~~~~~-------~~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~-~~~~v~~SS~~~~yg~  177 (363)
                      .++++       ++|++||+||.....   ..+.+..+..+++|+.++.++++++.+.  ..+ ..++|++||..+..+ 
T Consensus        93 ~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-  171 (280)
T 3pgx_A           93 RELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKA-  171 (280)
T ss_dssp             HHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSC-
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhccC-
Confidence            87765       789999999975432   2356677889999999999999988542  022 456999999854322 


Q ss_pred             cccccccCCCcchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHH----HhCCC
Q 017977          178 AAHQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMM----FAGGP  253 (363)
Q Consensus       178 ~~~~e~~~~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~----~~~~~  253 (363)
                            .+....|..+|.+...+.++       ....+. ..|+++++++||.+.++..... .....+..    ....+
T Consensus       172 ------~~~~~~Y~asKaa~~~~~~~-------la~e~~-~~gi~vn~v~PG~v~t~~~~~~-~~~~~~~~~~~~~~~~~  236 (280)
T 3pgx_A          172 ------TPGNGHYSASKHGLTALTNT-------LAIELG-EYGIRVNSIHPYSVETPMIEPE-AMMEIFARHPSFVHSFP  236 (280)
T ss_dssp             ------CTTBHHHHHHHHHHHHHHHH-------HHHHHG-GGTEEEEEEEECSBCSTTCCHH-HHHHHHHHCGGGGGGSC
T ss_pred             ------CCCchhHHHHHHHHHHHHHH-------HHHHhh-hcCeEEEEEeeCcccCcccchh-hhhhhhhcCchhhhhhh
Confidence                  22334555554333222211       111111 2389999999999998864321 11111110    01111


Q ss_pred             CCCCCCccccccHHHHHHHHHHHhcCCC--CCc-eEEeeCCC
Q 017977          254 LGSGQQWFSWIHLDDIVNLIYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       254 ~~~~~~~~~~i~v~D~a~a~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      ..... ...+.+++|+|++++.++....  ..| ++++.+|.
T Consensus       237 ~~~~~-~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  277 (280)
T 3pgx_A          237 PMPVQ-PNGFMTADEVADVVAWLAGDGSGTLTGTQIPVDKGA  277 (280)
T ss_dssp             CBTTB-CSSCBCHHHHHHHHHHHHSGGGTTCSSCEEEESTTG
T ss_pred             hcccC-CCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence            11111 1248999999999999987544  344 77777763

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.84  E-value=2.1e-20  Score=166.00  Aligned_cols=225  Identities=13%  Similarity=0.068  Sum_probs=144.7

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCC---------CCCccccCcccccCcchHHhhcc----
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP---------GKKTRFFPGVMIAEEPQWRDCIQ----  115 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---------~~~~~~~~~~d~~~~~~~~~~~~----  115 (363)
                      .+++|+||||+|+||++++++|+++|++|++++|+.........         .........+|+.|.+++.++++    
T Consensus        17 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   96 (303)
T 1yxm_A           17 QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLD   96 (303)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHH
Confidence            34789999999999999999999999999999998654322110         11112244589999988887775    


Q ss_pred             ---CCCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHh-C-CCCCCCeEEEeccceecCCcccccccCCC
Q 017977          116 ---GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINE-S-PEGVRPSVLELVKPKYLMRAAHQEMITWL  187 (363)
Q Consensus       116 ---~~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~-~-~~~~~~~v~~SS~~~~yg~~~~~e~~~~~  187 (363)
                         ++|+|||+||.....   ....+..+..+++|+.++.++++++.+ . ..+..++|++||. ..++       .+..
T Consensus        97 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~-~~~~-------~~~~  168 (303)
T 1yxm_A           97 TFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVP-TKAG-------FPLA  168 (303)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCC-CTTC-------CTTC
T ss_pred             HcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEee-cccC-------CCcc
Confidence               489999999964321   234566788899999999999999765 1 1234679999998 3322       2233


Q ss_pred             cchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCC-CcccchHHHH--HHHhCCCCCCCCCccccc
Q 017977          188 SDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDG-GALAKMIPLF--MMFAGGPLGSGQQWFSWI  264 (363)
Q Consensus       188 ~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~i  264 (363)
                      ..|..+|.+...+.       +.....+.. .|++++++||+.++|+.. ..........  ......+      ...++
T Consensus       169 ~~Y~~sK~a~~~~~-------~~la~e~~~-~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~p------~~~~~  234 (303)
T 1yxm_A          169 VHSGAARAGVYNLT-------KSLALEWAC-SGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIP------AKRIG  234 (303)
T ss_dssp             HHHHHHHHHHHHHH-------HHHHHHTGG-GTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGST------TSSCB
T ss_pred             hhhHHHHHHHHHHH-------HHHHHHhcc-cCeEEEEEecCCcccchhhhhccccchHHHHHHHhcCc------ccCCC
Confidence            34555432221111       111111111 389999999999999831 1111111100  0111111      12378


Q ss_pred             cHHHHHHHHHHHhcCCC--CCc-eEEeeCCCCcC
Q 017977          265 HLDDIVNLIYEALSNPS--YRG-VINGTAPNPVR  295 (363)
Q Consensus       265 ~v~D~a~a~~~~~~~~~--~~g-~~~i~~~~~~s  295 (363)
                      +++|+|++++.++....  ..| .+++.+|..++
T Consensus       235 ~~~dvA~~i~~l~~~~~~~~~G~~~~v~gG~~~~  268 (303)
T 1yxm_A          235 VPEEVSSVVCFLLSPAASFITGQSVDVDGGRSLY  268 (303)
T ss_dssp             CTHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             CHHHHHHHHHHHhCcccccCCCcEEEECCCeecc
Confidence            99999999999986533  344 88888875443

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.84  E-value=3.6e-20  Score=161.60  Aligned_cols=226  Identities=12%  Similarity=0.041  Sum_probs=144.9

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcc-cc----cCCCCCccccCcccccCcchHHhhcc-------
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-EL----IFPGKKTRFFPGVMIAEEPQWRDCIQ-------  115 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~----~~~~~~~~~~~~~d~~~~~~~~~~~~-------  115 (363)
                      ..+++++||||+|+||++++++|+++|++|++++|+..+. ..    ............+|+.|.+++.++++       
T Consensus        23 ~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  102 (269)
T 3gk3_A           23 QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFG  102 (269)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            3456899999999999999999999999999998554331 11    11111222345689999988877665       


Q ss_pred             CCCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcch
Q 017977          116 GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDY  190 (363)
Q Consensus       116 ~~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~  190 (363)
                      ++|+|||+||.....   ....+..+..+++|+.++.++++++...  ..+..++|++||..+.++       .+....|
T Consensus       103 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-------~~~~~~Y  175 (269)
T 3gk3_A          103 KVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRG-------AFGQANY  175 (269)
T ss_dssp             CCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC-------CTTBHHH
T ss_pred             CCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccC-------CCCcchH
Confidence            789999999975432   2355667889999999999998887542  134567999999854332       2233455


Q ss_pred             hhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHH
Q 017977          191 CAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIV  270 (363)
Q Consensus       191 ~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  270 (363)
                      ..+|.+...+.+      . ....+. ..|+++++++||.+.++......   ...   ....+........+.+++|+|
T Consensus       176 ~asKaa~~~~~~------~-la~e~~-~~gi~v~~v~PG~v~T~~~~~~~---~~~---~~~~~~~~~~~~~~~~p~dvA  241 (269)
T 3gk3_A          176 ASAKAGIHGFTK------T-LALETA-KRGITVNTVSPGYLATAMVEAVP---QDV---LEAKILPQIPVGRLGRPDEVA  241 (269)
T ss_dssp             HHHHHHHHHHHH------H-HHHHHG-GGTEEEEEEEECSBCCTTTTC-------------CCSGGGCTTSSCBCHHHHH
T ss_pred             HHHHHHHHHHHH------H-HHHHhh-hcCCEEEEEecCcccchhhhhhc---hhH---HHHHhhhcCCcCCccCHHHHH
Confidence            555433222221      1 111111 23899999999999887532211   000   000111111223467899999


Q ss_pred             HHHHHHhcCCC--CCc-eEEeeCCCCc
Q 017977          271 NLIYEALSNPS--YRG-VINGTAPNPV  294 (363)
Q Consensus       271 ~a~~~~~~~~~--~~g-~~~i~~~~~~  294 (363)
                      ++++.++....  ..| .+++.+|..+
T Consensus       242 ~~v~~L~s~~~~~itG~~i~vdgG~~~  268 (269)
T 3gk3_A          242 ALIAFLCSDDAGFVTGADLAINGGMHM  268 (269)
T ss_dssp             HHHHHHTSTTCTTCCSCEEEESTTSCC
T ss_pred             HHHHHHhCCCcCCeeCcEEEECCCEeC
Confidence            99999997654  344 8999887654

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.84  E-value=5.4e-20  Score=158.16  Aligned_cols=211  Identities=16%  Similarity=0.079  Sum_probs=141.7

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCC-------EEEEEeCCCCcccccC----CCCCccccCcccccCcchHHhhcc---
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNH-------QVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ---  115 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~---  115 (363)
                      +++|+||||+|+||++++++|+++|+       +|++++|+......+.    ..........+|+.|.+++.++++   
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV   81 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence            36899999999999999999999999       9999999865433221    111112245689999988887765   


Q ss_pred             ----CCCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCC
Q 017977          116 ----GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITW  186 (363)
Q Consensus       116 ----~~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~  186 (363)
                          ++|+|||+||.....   ....+..+..+++|+.++.++++++.+.  ..+..++|++||.++ +.      ..+.
T Consensus        82 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~-~~------~~~~  154 (244)
T 2bd0_A           82 ERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAA-TK------AFRH  154 (244)
T ss_dssp             HHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG-TS------CCTT
T ss_pred             HhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchh-cC------CCCC
Confidence                689999999975332   2355677889999999999999887542  135678999999843 22      1122


Q ss_pred             CcchhhhhhhcccchhhHHHHHHHHHHH-h-ccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccc
Q 017977          187 LSDYCAKVYCLVSFNRGVLVCREWEGTA-L-KVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWI  264 (363)
Q Consensus       187 ~~~~~~~~~~~~~y~~~k~~~~~~~~~~-~-~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  264 (363)
                      ...|..+          |.....+.... . ....|++++++||+.++++.......           .    . ...++
T Consensus       155 ~~~Y~~s----------K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-----------~----~-~~~~~  208 (244)
T 2bd0_A          155 SSIYCMS----------KFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDD-----------E----M-QALMM  208 (244)
T ss_dssp             CHHHHHH----------HHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCS-----------T----T-GGGSB
T ss_pred             CchhHHH----------HHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhccc-----------c----c-cccCC
Confidence            3345544          32222222111 1 11348999999999999985432110           0    0 23589


Q ss_pred             cHHHHHHHHHHHhcCCC--CCc-eEEeeCCCC
Q 017977          265 HLDDIVNLIYEALSNPS--YRG-VINGTAPNP  293 (363)
Q Consensus       265 ~v~D~a~a~~~~~~~~~--~~g-~~~i~~~~~  293 (363)
                      +++|+|++++.++..+.  ..| ++...+++.
T Consensus       209 ~~~dva~~~~~l~~~~~~~~~g~~~~~~~~~~  240 (244)
T 2bd0_A          209 MPEDIAAPVVQAYLQPSRTVVEEIILRPTSGD  240 (244)
T ss_dssp             CHHHHHHHHHHHHTSCTTEEEEEEEEEETTCC
T ss_pred             CHHHHHHHHHHHHhCCccccchheEEeccccc
Confidence            99999999999998655  223 444444443

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.84  E-value=2.1e-20  Score=162.01  Aligned_cols=224  Identities=18%  Similarity=0.102  Sum_probs=143.5

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc------CCCEEEE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ------GSTAVVN  122 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~------~~d~Vi~  122 (363)
                      .+++++||||+|+||++++++|+++|++|++++|+..+.....  ........+|+.|.+++.++++      ++|++||
T Consensus         8 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~g~id~lv~   85 (257)
T 3tl3_A            8 RDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVADL--GDRARFAAADVTDEAAVASALDLAETMGTLRIVVN   85 (257)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHT--CTTEEEEECCTTCHHHHHHHHHHHHHHSCEEEEEE
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHHhCCCCEEEE
Confidence            4568999999999999999999999999999999665433222  1122255689999988887775      7899999


Q ss_pred             ccCCCCCC-------CCChhhHHHHHHHHHHHHHHHHHHHHhC-C---------CCCCCeEEEeccceecCCcccccccC
Q 017977          123 LAGTPIGT-------RWSSEIKKEIKESRIRVTSKVVDLINES-P---------EGVRPSVLELVKPKYLMRAAHQEMIT  185 (363)
Q Consensus       123 ~a~~~~~~-------~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~---------~~~~~~v~~SS~~~~yg~~~~~e~~~  185 (363)
                      +||.....       ..+.+..+..+++|+.++.++++++.+. .         .+..++|++||..+..+       .+
T Consensus        86 nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------~~  158 (257)
T 3tl3_A           86 CAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDG-------QI  158 (257)
T ss_dssp             CGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CC-------HH
T ss_pred             CCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCC-------CC
Confidence            99963211       2456678899999999999999998863 1         12346999999843222       11


Q ss_pred             CCcchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCcccccc
Q 017977          186 WLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIH  265 (363)
Q Consensus       186 ~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  265 (363)
                      ....|..+|.+...+.+      . ....+. ..|+.++.++||.+.++.......-. ........+.     ...+.+
T Consensus       159 ~~~~Y~asKaa~~~~~~------~-la~e~~-~~gI~vn~v~PG~v~T~~~~~~~~~~-~~~~~~~~~~-----~~r~~~  224 (257)
T 3tl3_A          159 GQAAYSASKGGVVGMTL------P-IARDLA-SHRIRVMTIAPGLFDTPLLASLPEEA-RASLGKQVPH-----PSRLGN  224 (257)
T ss_dssp             HHHHHHHHHHHHHHHHH------H-HHHHHG-GGTEEEEEEEECSBCCTTC---CHHH-HHHHHHTSSS-----SCSCBC
T ss_pred             CCccHHHHHHHHHHHHH------H-HHHHhc-ccCcEEEEEEecCccChhhhhccHHH-HHHHHhcCCC-----CCCccC
Confidence            22244444332222211      1 111111 23899999999999887543211110 0111222222     024789


Q ss_pred             HHHHHHHHHHHhcCCCCCc-eEEeeCCCCcC
Q 017977          266 LDDIVNLIYEALSNPSYRG-VINGTAPNPVR  295 (363)
Q Consensus       266 v~D~a~a~~~~~~~~~~~g-~~~i~~~~~~s  295 (363)
                      ++|+|++++.+++.....| ++++.+|..++
T Consensus       225 p~dva~~v~~l~s~~~itG~~i~vdGG~~~~  255 (257)
T 3tl3_A          225 PDEYGALAVHIIENPMLNGEVIRLDGAIRMA  255 (257)
T ss_dssp             HHHHHHHHHHHHHCTTCCSCEEEESTTC---
T ss_pred             HHHHHHHHHHHhcCCCCCCCEEEECCCccCC
Confidence            9999999999998755555 88888775443

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.84  E-value=4.7e-20  Score=162.82  Aligned_cols=223  Identities=14%  Similarity=0.099  Sum_probs=145.9

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCc--ccc----cCCCCCccccCcccccCcchHHhhcc-------
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK--AEL----IFPGKKTRFFPGVMIAEEPQWRDCIQ-------  115 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~--~~~----~~~~~~~~~~~~~d~~~~~~~~~~~~-------  115 (363)
                      .++++|||||+|+||++++++|+++|++|++++|+...  .+.    ............+|+.|.++++++++       
T Consensus        48 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  127 (294)
T 3r3s_A           48 KDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREALG  127 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            45799999999999999999999999999999987432  111    11111222355689999888876664       


Q ss_pred             CCCEEEEccCCCCC----CCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchh
Q 017977          116 GSTAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYC  191 (363)
Q Consensus       116 ~~d~Vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~  191 (363)
                      ++|+|||+||....    ...+.+..+..+++|+.++.++++++.+......++|++||..+..+       .+....|.
T Consensus       128 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~-------~~~~~~Y~  200 (294)
T 3r3s_A          128 GLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQP-------SPHLLDYA  200 (294)
T ss_dssp             CCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSC-------CTTCHHHH
T ss_pred             CCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccC-------CCCchHHH
Confidence            68999999997432    13356677889999999999999999874222347999999843221       22334565


Q ss_pred             hhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCC---CcccchHHHHHHHhCCCCCCCCCccccccHHH
Q 017977          192 AKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDG---GALAKMIPLFMMFAGGPLGSGQQWFSWIHLDD  268 (363)
Q Consensus       192 ~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  268 (363)
                      .+|.+...+.++       ....+. ..|+++++++||.|.++..   .......        ..+........+..++|
T Consensus       201 asKaa~~~l~~~-------la~e~~-~~gI~vn~v~PG~v~t~~~~~~~~~~~~~--------~~~~~~~p~~r~~~p~d  264 (294)
T 3r3s_A          201 ATKAAILNYSRG-------LAKQVA-EKGIRVNIVAPGPIWTALQISGGQTQDKI--------PQFGQQTPMKRAGQPAE  264 (294)
T ss_dssp             HHHHHHHHHHHH-------HHHHHG-GGTCEEEEEEECSBCSHHHHTTTSCGGGS--------TTTTTTSTTSSCBCGGG
T ss_pred             HHHHHHHHHHHH-------HHHHHh-hcCeEEEEEecCcCccccccccCCCHHHH--------HHHHhcCCCCCCcCHHH
Confidence            554333222211       111111 2389999999999987631   1101110        01111122234788999


Q ss_pred             HHHHHHHHhcCCC--C-CceEEeeCCCCc
Q 017977          269 IVNLIYEALSNPS--Y-RGVINGTAPNPV  294 (363)
Q Consensus       269 ~a~a~~~~~~~~~--~-~g~~~i~~~~~~  294 (363)
                      +|++++.++....  . +.++++.+|..+
T Consensus       265 vA~~v~~L~s~~~~~itG~~i~vdGG~~l  293 (294)
T 3r3s_A          265 LAPVYVYLASQESSYVTAEVHGVCGGEHL  293 (294)
T ss_dssp             GHHHHHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred             HHHHHHHHhCccccCCCCCEEEECCCccC
Confidence            9999999987543  3 448899887644

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.83  E-value=3.7e-20  Score=162.27  Aligned_cols=224  Identities=14%  Similarity=0.093  Sum_probs=144.5

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCccccc----CCCCCccccCcccccCcchHHhhcc-------C
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (363)
                      ..++++|||||+|+||+++++.|+++|++|++++|+.......    ...........+|+.|.+++.++++       .
T Consensus        22 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  101 (279)
T 3sju_A           22 SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGP  101 (279)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            3456899999999999999999999999999999987654322    1112222345689999988877665       6


Q ss_pred             CCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHh--C--CCCCCCeEEEeccceecCCcccccccCCCcc
Q 017977          117 STAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINE--S--PEGVRPSVLELVKPKYLMRAAHQEMITWLSD  189 (363)
Q Consensus       117 ~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~--~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~  189 (363)
                      +|+|||+||.....   ....+..+..+++|+.++.++++++.+  .  ..+..++|++||.++..+       .+....
T Consensus       102 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~-------~~~~~~  174 (279)
T 3sju_A          102 IGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQG-------VMYAAP  174 (279)
T ss_dssp             CCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSC-------CTTCHH
T ss_pred             CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccC-------CCCChh
Confidence            89999999975432   235566788999999999999998755  1  134567999999854322       223345


Q ss_pred             hhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCccc---------chHHHH-HHHhCCCCCCCCC
Q 017977          190 YCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALA---------KMIPLF-MMFAGGPLGSGQQ  259 (363)
Q Consensus       190 ~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~---------~~~~~~-~~~~~~~~~~~~~  259 (363)
                      |..+|.+...+.+       .....+. ..|+++.+++||.+.++......         ..-... ......++     
T Consensus       175 Y~asKaa~~~l~~-------~la~e~~-~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-----  241 (279)
T 3sju_A          175 YTASKHGVVGFTK-------SVGFELA-KTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPL-----  241 (279)
T ss_dssp             HHHHHHHHHHHHH-------HHHHHTG-GGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTCTT-----
T ss_pred             HHHHHHHHHHHHH-------HHHHHHH-hhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcCCC-----
Confidence            5555433222211       1111111 23899999999999875311000         000111 11122222     


Q ss_pred             ccccccHHHHHHHHHHHhcCCC--CCc-eEEeeCCC
Q 017977          260 WFSWIHLDDIVNLIYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       260 ~~~~i~v~D~a~a~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                       ..+.+++|+|++++.++....  ..| .+++.+|.
T Consensus       242 -~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~  276 (279)
T 3sju_A          242 -GRYSTPEEVAGLVGYLVTDAAASITAQALNVCGGL  276 (279)
T ss_dssp             -SSCBCHHHHHHHHHHHTSSGGGGCCSCEEEESTTC
T ss_pred             -CCCCCHHHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence             247889999999999987654  344 88887764

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.83  E-value=1.4e-20  Score=163.73  Aligned_cols=225  Identities=14%  Similarity=0.114  Sum_probs=146.9

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccC----CCCCccccCcccccCcchHHhhcc-------C
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (363)
                      ..+++++||||+|+||++++++|+++|++|++++|+.+..+...    ..........+|+.|.+++.++++       +
T Consensus         9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   88 (264)
T 3ucx_A            9 LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGR   88 (264)
T ss_dssp             TTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             cCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            34578999999999999999999999999999999876543221    111222245689999988877765       6


Q ss_pred             CCEEEEccCCCCC----CCCChhhHHHHHHHHHHHHHHHHHHHHhC-CCCCCCeEEEeccceecCCcccccccCCCcchh
Q 017977          117 STAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYC  191 (363)
Q Consensus       117 ~d~Vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~  191 (363)
                      +|++||+||....    ...+.+..+..+++|+.++.++++++.+. .....++|++||..+..+       .+....|.
T Consensus        89 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------~~~~~~Y~  161 (264)
T 3ucx_A           89 VDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESKGAVVNVNSMVVRHS-------QAKYGAYK  161 (264)
T ss_dssp             CSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHTCEEEEECCGGGGCC-------CTTCHHHH
T ss_pred             CcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEECcchhccC-------CCccHHHH
Confidence            8999999986322    23455677889999999999999887642 112267999999854222       23334566


Q ss_pred             hhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccc---------hHHHH-HHHhCCCCCCCCCcc
Q 017977          192 AKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAK---------MIPLF-MMFAGGPLGSGQQWF  261 (363)
Q Consensus       192 ~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~---------~~~~~-~~~~~~~~~~~~~~~  261 (363)
                      .+|.+...+.++       ....+. ..|+++.+++||.++++.......         .-... ......+      ..
T Consensus       162 asKaa~~~~~~~-------la~e~~-~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p------~~  227 (264)
T 3ucx_A          162 MAKSALLAMSQT-------LATELG-EKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSD------LK  227 (264)
T ss_dssp             HHHHHHHHHHHH-------HHHHHH-TTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSS------SS
T ss_pred             HHHHHHHHHHHH-------HHHHhC-ccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccCC------cc
Confidence            554333322221       111111 248999999999998763211000         00011 1112222      23


Q ss_pred             ccccHHHHHHHHHHHhcCCC--CCc-eEEeeCCCC
Q 017977          262 SWIHLDDIVNLIYEALSNPS--YRG-VINGTAPNP  293 (363)
Q Consensus       262 ~~i~v~D~a~a~~~~~~~~~--~~g-~~~i~~~~~  293 (363)
                      .+.+++|+|++++.++....  ..| ++++.+|..
T Consensus       228 r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~  262 (264)
T 3ucx_A          228 RLPTEDEVASAILFMASDLASGITGQALDVNCGEY  262 (264)
T ss_dssp             SCCBHHHHHHHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred             cCCCHHHHHHHHHHHcCccccCCCCCEEEECCCcc
Confidence            47899999999999987543  344 888888754

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.83  E-value=1.1e-20  Score=168.68  Aligned_cols=226  Identities=12%  Similarity=0.106  Sum_probs=144.3

Q ss_pred             CCCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCccc------------c----cCCCCCccccCcccccCcchH
Q 017977           47 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE------------L----IFPGKKTRFFPGVMIAEEPQW  110 (363)
Q Consensus        47 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~------------~----~~~~~~~~~~~~~d~~~~~~~  110 (363)
                      ...+++||||||+|+||+++++.|+++|++|++++|+.....            .    +...........+|+.|.+++
T Consensus        43 ~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v  122 (317)
T 3oec_A           43 RLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASL  122 (317)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence            345679999999999999999999999999999988632210            0    001111222446899999888


Q ss_pred             Hhhcc-------CCCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC---CCCCCCeEEEeccceecCC
Q 017977          111 RDCIQ-------GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES---PEGVRPSVLELVKPKYLMR  177 (363)
Q Consensus       111 ~~~~~-------~~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~~v~~SS~~~~yg~  177 (363)
                      .++++       ++|+|||+||.....   ..+.+..+..+++|+.++.++++++.+.   .....++|++||..+.++ 
T Consensus       123 ~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~-  201 (317)
T 3oec_A          123 QAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRG-  201 (317)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSC-
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcCC-
Confidence            87765       689999999975432   3356677889999999999998888542   122456999999854332 


Q ss_pred             cccccccCCCcchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHH-----------
Q 017977          178 AAHQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF-----------  246 (363)
Q Consensus       178 ~~~~e~~~~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~-----------  246 (363)
                            .+....|..+|.+...+.++       ....+. ..|+++++++||.|.++..... .....+           
T Consensus       202 ------~~~~~~Y~asKaa~~~l~~~-------la~e~~-~~gI~vn~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~~~~  266 (317)
T 3oec_A          202 ------APGQSHYAASKHGVQGLMLS-------LANEVG-RHNIRVNSVNPGAVNTEMALNE-KLLKMFLPHLENPTRED  266 (317)
T ss_dssp             ------CTTBHHHHHHHHHHHHHHHH-------HHHHHG-GGTEEEEEEEECSBSSHHHHCH-HHHHHHCTTCSSCCHHH
T ss_pred             ------CCCCcchHHHHHHHHHHHHH-------HHHHHh-hcCeEEEEEecCcccCccccch-hhhhhhhhhccccchhH
Confidence                  22334555554333222211       111111 2389999999999987632100 000000           


Q ss_pred             --HHHhCCCCCCCCCccccccHHHHHHHHHHHhcCCC--CCc-eEEeeCCC
Q 017977          247 --MMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       247 --~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                        .....    .......+++++|+|++++.++....  ..| ++++.+|.
T Consensus       267 ~~~~~~~----~~~~p~~~~~pedvA~av~fL~s~~a~~itG~~i~vdGG~  313 (317)
T 3oec_A          267 AAELFSQ----LTLLPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQ  313 (317)
T ss_dssp             HHHHHTT----TCSSSSSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHhh----hccCCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECcch
Confidence              00001    01112468899999999999986543  344 88888774

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.83  E-value=2.4e-20  Score=162.29  Aligned_cols=224  Identities=14%  Similarity=0.074  Sum_probs=143.3

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCccccc-----CCCCCccccCcccccCcchHHhhcc-------C
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI-----FPGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----~~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (363)
                      ++++|+||||+|+||++++++|+++|++|++++|+.......     ........+..+|+.|.+++.++++       +
T Consensus         6 ~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   85 (264)
T 3i4f_A            6 FVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGK   85 (264)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             ccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            356899999999999999999999999999998876442111     1111112245689999988887775       7


Q ss_pred             CCEEEEccCCCCC-----CCCChhhHHHHHHHHHHHHHHHHHHH----HhCCCCCCCeEEEeccceecCCcccccccCCC
Q 017977          117 STAVVNLAGTPIG-----TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLELVKPKYLMRAAHQEMITWL  187 (363)
Q Consensus       117 ~d~Vi~~a~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~  187 (363)
                      +|+|||+||....     .....+..+..+++|+.++.++++++    .+  .+..++|++||.+ .++    ....+..
T Consensus        86 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~~~g~iv~iss~~-~~~----~~~~~~~  158 (264)
T 3i4f_A           86 IDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRK--QNFGRIINYGFQG-ADS----APGWIYR  158 (264)
T ss_dssp             CCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCEEEEEECCTT-GGG----CCCCTTC
T ss_pred             CCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHh--cCCCeEEEEeech-hcc----cCCCCCC
Confidence            8999999994211     23355667889999999999999998    44  4567799999872 221    0111223


Q ss_pred             cchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHH
Q 017977          188 SDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLD  267 (363)
Q Consensus       188 ~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  267 (363)
                      ..|..+|.+...+.++       ....+. ..|+++++++||.++++.....   .........    .......+.+++
T Consensus       159 ~~Y~asKaa~~~~~~~-------la~e~~-~~gi~v~~v~PG~v~t~~~~~~---~~~~~~~~~----~~~p~~r~~~~~  223 (264)
T 3i4f_A          159 SAFAAAKVGLVSLTKT-------VAYEEA-EYGITANMVCPGDIIGEMKEAT---IQEARQLKE----HNTPIGRSGTGE  223 (264)
T ss_dssp             HHHHHHHHHHHHHHHH-------HHHHHG-GGTEEEEEEEECCCCGGGGSCC---HHHHHHC------------CCCCHH
T ss_pred             chhHHHHHHHHHHHHH-------HHHHhh-hcCcEEEEEccCCccCccchhc---cHHHHHHHh----hcCCCCCCcCHH
Confidence            4555554332222210       111111 2389999999999998753221   121111000    111122478899


Q ss_pred             HHHHHHHHHhcCCC--C-CceEEeeCCCCc
Q 017977          268 DIVNLIYEALSNPS--Y-RGVINGTAPNPV  294 (363)
Q Consensus       268 D~a~a~~~~~~~~~--~-~g~~~i~~~~~~  294 (363)
                      |+|++++.++....  . +.++++.+|...
T Consensus       224 dva~~v~~l~s~~~~~itG~~i~vdGG~~~  253 (264)
T 3i4f_A          224 DIARTISFLCEDDSDMITGTIIEVTGAVDV  253 (264)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESCSCCC
T ss_pred             HHHHHHHHHcCcccCCCCCcEEEEcCceee
Confidence            99999999997543  3 448888887544

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.83  E-value=5.2e-21  Score=167.57  Aligned_cols=226  Identities=12%  Similarity=0.050  Sum_probs=147.4

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCC-----CCccccCcccccCcchHHhhcc-------
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KKTRFFPGVMIAEEPQWRDCIQ-------  115 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~-------  115 (363)
                      ..+++++||||+|+||++++++|+++|++|++++|+..........     ........+|+.|.+++.++++       
T Consensus        25 l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  104 (277)
T 4fc7_A           25 LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFG  104 (277)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4457999999999999999999999999999999987553221110     1112245689999988877765       


Q ss_pred             CCCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcch
Q 017977          116 GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDY  190 (363)
Q Consensus       116 ~~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~  190 (363)
                      ++|+|||+||.....   ..+.+..+..+++|+.++.++++++.+.  ..+..++|++||..+.++       .+....|
T Consensus       105 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-------~~~~~~Y  177 (277)
T 4fc7_A          105 RIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRG-------QALQVHA  177 (277)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHT-------CTTCHHH
T ss_pred             CCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCC-------CCCcHHH
Confidence            689999999964332   3456678889999999999999988531  134567999999854332       2233455


Q ss_pred             hhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCc-ccchHHHH-HHHhCCCCCCCCCccccccHHH
Q 017977          191 CAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA-LAKMIPLF-MMFAGGPLGSGQQWFSWIHLDD  268 (363)
Q Consensus       191 ~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D  268 (363)
                      ..+|.+...+.++       ....+. ..|+++..++||.+.++.... ........ ......++      ..+..++|
T Consensus       178 ~asKaa~~~l~~~-------la~e~~-~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~------~r~~~p~d  243 (277)
T 4fc7_A          178 GSAKAAVDAMTRH-------LAVEWG-PQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPL------QRLGNKTE  243 (277)
T ss_dssp             HHHHHHHHHHHHH-------HHHHHG-GGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTSTT------SSCBCHHH
T ss_pred             HHHHHHHHHHHHH-------HHHHhh-hcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccCCC------CCCcCHHH
Confidence            5554332222211       111111 238999999999998763110 00001111 22223332      23778999


Q ss_pred             HHHHHHHHhcCCC--CCc-eEEeeCCCCc
Q 017977          269 IVNLIYEALSNPS--YRG-VINGTAPNPV  294 (363)
Q Consensus       269 ~a~a~~~~~~~~~--~~g-~~~i~~~~~~  294 (363)
                      +|++++.++....  ..| ++++.+|..+
T Consensus       244 vA~~v~fL~s~~~~~itG~~i~vdGG~~~  272 (277)
T 4fc7_A          244 IAHSVLYLASPLASYVTGAVLVADGGAWL  272 (277)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTHHH
T ss_pred             HHHHHHHHcCCccCCcCCCEEEECCCccc
Confidence            9999999997543  344 8888877533

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.83  E-value=2.8e-20  Score=159.94  Aligned_cols=216  Identities=16%  Similarity=0.100  Sum_probs=143.3

Q ss_pred             CccEEEEecCcchHHHHHHHHHHh-CCCEEEEEeCCCCc-ccccCCCCCccccCcccccCcchHHhhcc-----CCCEEE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQA-DNHQVRVLTRSRSK-AELIFPGKKTRFFPGVMIAEEPQWRDCIQ-----GSTAVV  121 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-----~~d~Vi  121 (363)
                      .++++|||||+|+||+++++.|++ .|++|++++|+... ....       ....+|+.|.+++.++++     ++|++|
T Consensus         3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~~~~~-------~~~~~Dv~~~~~v~~~~~~~~~~~id~lv   75 (244)
T 4e4y_A            3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAENL-------KFIKADLTKQQDITNVLDIIKNVSFDGIF   75 (244)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCCCTTE-------EEEECCTTCHHHHHHHHHHTTTCCEEEEE
T ss_pred             CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccccccc-------eEEecCcCCHHHHHHHHHHHHhCCCCEEE
Confidence            457899999999999999999999 78999999998752 2211       255689999998887775     689999


Q ss_pred             EccCCCCC---CCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhcc
Q 017977          122 NLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLV  198 (363)
Q Consensus       122 ~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~  198 (363)
                      |+||....   ...+.+..+..+++|+.++.++++++.+......++|++||..+..+       .+....|..+|.+..
T Consensus        76 ~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-------~~~~~~Y~asKaa~~  148 (244)
T 4e4y_A           76 LNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIA-------KPNSFAYTLSKGAIA  148 (244)
T ss_dssp             ECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCC-------CTTBHHHHHHHHHHH
T ss_pred             ECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccC-------CCCCchhHHHHHHHH
Confidence            99997533   23456677889999999999999999873111146999999843222       223345655543332


Q ss_pred             cchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc-cchH-------H-HH-HHHhCCCCCCCCCccccccHHH
Q 017977          199 SFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL-AKMI-------P-LF-MMFAGGPLGSGQQWFSWIHLDD  268 (363)
Q Consensus       199 ~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~-~~~~-------~-~~-~~~~~~~~~~~~~~~~~i~v~D  268 (363)
                      .+.++       ....+. ..|+++++++||.+.++..... ....       . .. ......+      ...+.+++|
T Consensus       149 ~~~~~-------la~e~~-~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p------~~r~~~p~d  214 (244)
T 4e4y_A          149 QMTKS-------LALDLA-KYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFP------LNRIAQPQE  214 (244)
T ss_dssp             HHHHH-------HHHHHG-GGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTTST------TSSCBCHHH
T ss_pred             HHHHH-------HHHHHH-HcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhcCC------CCCCcCHHH
Confidence            22211       111111 2389999999999987632110 0000       0 11 1111112      234789999


Q ss_pred             HHHHHHHHhcCCC--CCc-eEEeeCCC
Q 017977          269 IVNLIYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       269 ~a~a~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      +|++++.++....  ..| .+++.+|.
T Consensus       215 vA~~v~~l~s~~~~~itG~~i~vdGG~  241 (244)
T 4e4y_A          215 IAELVIFLLSDKSKFMTGGLIPIDGGY  241 (244)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHhcCccccccCCeEeECCCc
Confidence            9999999997543  334 88887764

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.83  E-value=4.7e-20  Score=159.80  Aligned_cols=224  Identities=11%  Similarity=-0.017  Sum_probs=135.0

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccC----CCEEEEccC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQG----STAVVNLAG  125 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~----~d~Vi~~a~  125 (363)
                      |++|+||||+|+||+++++.|+++|++|++++|+..+...         ...+|+.|.+++.++++.    +|+|||+||
T Consensus         1 mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~---------~~~~Dl~~~~~v~~~~~~~~~~id~lv~~Ag   71 (257)
T 1fjh_A            1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA---------DLSTAEGRKQAIADVLAKCSKGMDGLVLCAG   71 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC---------CTTSHHHHHHHHHHHHTTCTTCCSEEEECCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc---------ccccCCCCHHHHHHHHHHhCCCCCEEEECCC
Confidence            4689999999999999999999999999999998765432         134799999888887754    599999999


Q ss_pred             CCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCC--cccccccCCCcchh---------h
Q 017977          126 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMR--AAHQEMITWLSDYC---------A  192 (363)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~--~~~~e~~~~~~~~~---------~  192 (363)
                      ....    ....+..+++|+.++.++++++.+.  ..+..++|++||.++..+.  .+..+.......+.         .
T Consensus        72 ~~~~----~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (257)
T 1fjh_A           72 LGPQ----TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAG  147 (257)
T ss_dssp             CCTT----CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCC
T ss_pred             CCCC----cccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchhhhhhhhhccc
Confidence            7421    1236889999999999999988742  1456789999998432110  00000000000000         0


Q ss_pred             hhhhcccchhhHHHHHHHHHHHhcc--CCCceEEEEeeceEEeCCCCcc-c-chHHHHHHHhCCCCCCCCCccccccHHH
Q 017977          193 KVYCLVSFNRGVLVCREWEGTALKV--NKDVRLALIRIGIVLGKDGGAL-A-KMIPLFMMFAGGPLGSGQQWFSWIHLDD  268 (363)
Q Consensus       193 ~~~~~~~y~~~k~~~~~~~~~~~~~--~~~~~~~ilRp~~v~g~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~i~v~D  268 (363)
                      .......|..+|.....+.......  ..|+++++++||.+.++..... . ....  .....  +  ......+++++|
T Consensus       148 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~--~~~~~--~--~~~~~~~~~~~d  221 (257)
T 1fjh_A          148 EQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYG--ESIAK--F--VPPMGRRAEPSE  221 (257)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-------------------------C--CCSTTSCCCTHH
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccchhHH--HHHHh--c--ccccCCCCCHHH
Confidence            0011234566664433333222211  2489999999999988753221 0 0000  00000  0  111124789999


Q ss_pred             HHHHHHHHhcCCC--CCc-eEEeeCCC
Q 017977          269 IVNLIYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       269 ~a~a~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      +|++++.++..+.  ..| .+++.++.
T Consensus       222 vA~~~~~l~~~~~~~~tG~~~~vdgG~  248 (257)
T 1fjh_A          222 MASVIAFLMSPAASYVHGAQIVIDGGI  248 (257)
T ss_dssp             HHHHHHHHTSGGGTTCCSCEEEESTTH
T ss_pred             HHHHHHHHhCchhcCCcCCEEEECCCc
Confidence            9999999987642  345 67776653

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.83  E-value=3.2e-20  Score=162.12  Aligned_cols=225  Identities=13%  Similarity=0.058  Sum_probs=143.5

Q ss_pred             CCCCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcc-ccc----CCCCCccccCcccccCcchHHhhcc-----
Q 017977           46 QKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-ELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-----  115 (363)
Q Consensus        46 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-----  115 (363)
                      ....+++|+||||+|+||++++++|+++|++|++++|+..+. +..    ...........+|+.|.+++.++++     
T Consensus        25 m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~  104 (271)
T 4iin_A           25 MQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQS  104 (271)
T ss_dssp             CCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHh
Confidence            334557999999999999999999999999999999965432 111    1111122245689999888877765     


Q ss_pred             --CCCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCc
Q 017977          116 --GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLS  188 (363)
Q Consensus       116 --~~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~  188 (363)
                        ++|+|||+||.....   ....+..+..+++|+.++.++++++.+.  ..+..++|++||..+.++       .+...
T Consensus       105 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-------~~~~~  177 (271)
T 4iin_A          105 DGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERG-------NMGQT  177 (271)
T ss_dssp             HSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC-------CTTCH
T ss_pred             cCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCC-------CCCch
Confidence              789999999975432   2355677889999999998888877542  135567999999854332       23334


Q ss_pred             chhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHH
Q 017977          189 DYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDD  268 (363)
Q Consensus       189 ~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  268 (363)
                      .|..+|.+...+.++       ....+. ..++++..++||.+.++.....   .....    ...........+.+++|
T Consensus       178 ~Y~asK~a~~~~~~~-------la~e~~-~~gi~v~~v~PG~v~T~~~~~~---~~~~~----~~~~~~~~~~~~~~p~d  242 (271)
T 4iin_A          178 NYSASKGGMIAMSKS-------FAYEGA-LRNIRFNSVTPGFIETDMNANL---KDELK----ADYVKNIPLNRLGSAKE  242 (271)
T ss_dssp             HHHHHHHHHHHHHHH-------HHHHHH-TTTEEEEEEEECSBCCC-------------------CGGGCTTCSCBCHHH
T ss_pred             HhHHHHHHHHHHHHH-------HHHHHH-HhCcEEEEEEeCcccCCchhhh---cHHHH----HHHHhcCCcCCCcCHHH
Confidence            555554332222211       111111 2489999999999987643221   11110    00111112234789999


Q ss_pred             HHHHHHHHhcCCC--CCc-eEEeeCCC
Q 017977          269 IVNLIYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       269 ~a~a~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      +|+++..++....  ..| ++++.+|.
T Consensus       243 vA~~i~~l~s~~~~~itG~~i~vdGG~  269 (271)
T 4iin_A          243 VAEAVAFLLSDHSSYITGETLKVNGGL  269 (271)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             HHHHHHHHhCCCcCCCcCCEEEeCCCe
Confidence            9999999997543  344 88887764

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.83  E-value=1e-19  Score=154.15  Aligned_cols=206  Identities=14%  Similarity=0.048  Sum_probs=140.5

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc---CCCEEEEccC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ---GSTAVVNLAG  125 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~~d~Vi~~a~  125 (363)
                      .+++++||||+|+||++++++|+++|++|++++|+..                +|+.|.++++++++   ++|++||+||
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~----------------~D~~~~~~v~~~~~~~g~id~lv~nAg   68 (223)
T 3uce_A            5 DKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG----------------LDISDEKSVYHYFETIGAFDHLIVTAG   68 (223)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT----------------CCTTCHHHHHHHHHHHCSEEEEEECCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc----------------cCCCCHHHHHHHHHHhCCCCEEEECCC
Confidence            3468999999999999999999999999999998753                68888888887765   6899999999


Q ss_pred             CCCC----CCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhcccch
Q 017977          126 TPIG----TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVSFN  201 (363)
Q Consensus       126 ~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~~y~  201 (363)
                      ....    ...+.+..+..+++|+.++.++++++.+......++|++||..+..+       .+....|..+|.+     
T Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-------~~~~~~Y~asK~a-----  136 (223)
T 3uce_A           69 SYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKV-------VANTYVKAAINAA-----  136 (223)
T ss_dssp             CCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSC-------CTTCHHHHHHHHH-----
T ss_pred             CCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccC-------CCCchHHHHHHHH-----
Confidence            7422    23456677889999999999999999874111246999999843221       2233445555432     


Q ss_pred             hhHHHHHHHHHHH-hccCCCceEEEEeeceEEeCCCCcc-cchHHH-H-HHHhCCCCCCCCCccccccHHHHHHHHHHHh
Q 017977          202 RGVLVCREWEGTA-LKVNKDVRLALIRIGIVLGKDGGAL-AKMIPL-F-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEAL  277 (363)
Q Consensus       202 ~~k~~~~~~~~~~-~~~~~~~~~~ilRp~~v~g~~~~~~-~~~~~~-~-~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~  277 (363)
                           .....+.. .+.. .+++..++||.+.++..... ...... . ......++      ..+.+++|+|++++.++
T Consensus       137 -----~~~~~~~la~e~~-~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~dvA~~~~~l~  204 (223)
T 3uce_A          137 -----IEATTKVLAKELA-PIRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLPV------GKVGEASDIAMAYLFAI  204 (223)
T ss_dssp             -----HHHHHHHHHHHHT-TSEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHSTT------CSCBCHHHHHHHHHHHH
T ss_pred             -----HHHHHHHHHHhhc-CcEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCCC------CCccCHHHHHHHHHHHc
Confidence                 22221111 1222 39999999999988743211 111111 1 11222222      24788999999999999


Q ss_pred             cCCCCCc-eEEeeCCCCc
Q 017977          278 SNPSYRG-VINGTAPNPV  294 (363)
Q Consensus       278 ~~~~~~g-~~~i~~~~~~  294 (363)
                      +.....| .+++.+|..+
T Consensus       205 ~~~~~tG~~i~vdgG~~~  222 (223)
T 3uce_A          205 QNSYMTGTVIDVDGGALL  222 (223)
T ss_dssp             HCTTCCSCEEEESTTGGG
T ss_pred             cCCCCCCcEEEecCCeec
Confidence            8655455 8888877543

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.83  E-value=5.2e-20  Score=161.98  Aligned_cols=221  Identities=13%  Similarity=0.108  Sum_probs=141.3

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCccccc----CCCCCccccCcccccCcchHHhhcc-------CC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (363)
                      .+++|+||||+|+||+++++.|+++|++|++++|+..+.+..    ...........+|+.|.+++.++++       ++
T Consensus        43 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~i  122 (285)
T 2c07_A           43 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNV  122 (285)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            346899999999999999999999999999999876543321    1111112244679999988887763       68


Q ss_pred             CEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhh
Q 017977          118 TAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCA  192 (363)
Q Consensus       118 d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~  192 (363)
                      |+|||+||.....   ....+..+..+++|+.++.++++++.+.  ..+.+++|++||.++.++       .+....|..
T Consensus       123 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-------~~~~~~Y~a  195 (285)
T 2c07_A          123 DILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTG-------NVGQANYSS  195 (285)
T ss_dssp             CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC-------CTTCHHHHH
T ss_pred             CEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccC-------CCCCchHHH
Confidence            9999999975332   2355667889999999988877777531  135678999999854333       223334555


Q ss_pred             hhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCccc-chHHHHHHHhCCCCCCCCCccccccHHHHHH
Q 017977          193 KVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALA-KMIPLFMMFAGGPLGSGQQWFSWIHLDDIVN  271 (363)
Q Consensus       193 ~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  271 (363)
                      +|.+...+.+      . ....+. ..|+++++++|+.+.++...... ....  ......+.      ..+++++|+|+
T Consensus       196 sK~a~~~~~~------~-la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~--~~~~~~~~------~~~~~~~dvA~  259 (285)
T 2c07_A          196 SKAGVIGFTK------S-LAKELA-SRNITVNAIAPGFISSDMTDKISEQIKK--NIISNIPA------GRMGTPEEVAN  259 (285)
T ss_dssp             HHHHHHHHHH------H-HHHHHG-GGTEEEEEEEECSBCC-----CCHHHHH--HHHTTCTT------SSCBCHHHHHH
T ss_pred             HHHHHHHHHH------H-HHHHHH-HhCcEEEEEEeCcEecCchhhcCHHHHH--HHHhhCCC------CCCCCHHHHHH
Confidence            4322221111      1 111111 23899999999999887432211 1111  11122222      23789999999


Q ss_pred             HHHHHhcCCC--CCc-eEEeeCCC
Q 017977          272 LIYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       272 a~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      +++.++..+.  ..| .+++.+|.
T Consensus       260 ~~~~l~~~~~~~~~G~~i~v~gG~  283 (285)
T 2c07_A          260 LACFLSSDKSGYINGRVFVIDGGL  283 (285)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             HHHHHhCCCcCCCCCCEEEeCCCc
Confidence            9999987543  234 78887764

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.83  E-value=7e-20  Score=161.61  Aligned_cols=230  Identities=13%  Similarity=0.027  Sum_probs=142.2

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCC-CCccccCcccccCcchHHhhcc---CCCEEEEc
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ---GSTAVVNL  123 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~---~~d~Vi~~  123 (363)
                      ..+++|+||||+|+||++++++|+++|++|++++|+..+....... ........+|+.|.+++.++++   ++|+|||+
T Consensus        14 l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~lv~n   93 (291)
T 3rd5_A           14 FAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGVSGADVLINN   93 (291)
T ss_dssp             CTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTCCCEEEEEEC
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhcCCCCEEEEC
Confidence            3457999999999999999999999999999999998765443322 1222355689999999988876   57999999


Q ss_pred             cCCCCCC-CCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhcccchh
Q 017977          124 AGTPIGT-RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVSFNR  202 (363)
Q Consensus       124 a~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~~y~~  202 (363)
                      ||..... ....+..+..+++|+.++.++++++.+  ...+++|++||.++..+....+........+.    ....|..
T Consensus        94 Ag~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~--~~~~riv~isS~~~~~~~~~~~~~~~~~~~~~----~~~~Y~~  167 (291)
T 3rd5_A           94 AGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLP--RLTDRVVTVSSMAHWPGRINLEDLNWRSRRYS----PWLAYSQ  167 (291)
T ss_dssp             CCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGG--GEEEEEEEECCGGGTTCCCCSSCTTCSSSCCC----HHHHHHH
T ss_pred             CcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHH--HHHhheeEeechhhccCCCCcccccccccCCC----CcchHHH
Confidence            9974321 234455678999999999999999998  55668999999854434111111000000110    0122444


Q ss_pred             hHHHHHHHHHHH---hccC-CCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHHHHHhc
Q 017977          203 GVLVCREWEGTA---LKVN-KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALS  278 (363)
Q Consensus       203 ~k~~~~~~~~~~---~~~~-~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~  278 (363)
                      +|..........   +... .+++++.++||.+..+.........  .......+     ..+-..+++|+|++++.++.
T Consensus       168 sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~~--~~~~~~~~-----~~~~~~~~~~~A~~~~~l~~  240 (291)
T 3rd5_A          168 SKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRKL--GDALMSAA-----TRVVATDADFGARQTLYAAS  240 (291)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC---------------------------CHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccchHH--HHHHHHHH-----HHHHhCCHHHHHHHHHHHHc
Confidence            443322222211   1111 2499999999999776432211000  00000001     11223469999999999998


Q ss_pred             CCCCCc-eEEeeC
Q 017977          279 NPSYRG-VINGTA  290 (363)
Q Consensus       279 ~~~~~g-~~~i~~  290 (363)
                      .+...| .+.+.+
T Consensus       241 ~~~~~G~~~~vdg  253 (291)
T 3rd5_A          241 QDLPGDSFVGPRF  253 (291)
T ss_dssp             SCCCTTCEEEETT
T ss_pred             CCCCCCceeCCcc
Confidence            766666 444443

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.83  E-value=8.8e-20  Score=158.95  Aligned_cols=218  Identities=15%  Similarity=0.099  Sum_probs=144.4

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCC-Ccccc----cCCCCCccccCcccccCcchHHhhcc-------C
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR-SKAEL----IFPGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~----~~~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (363)
                      ++++|+||||+|+||++++++|+++|++|+++.++. .....    +........+..+|+.|.+++.++++       +
T Consensus        25 ~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~  104 (267)
T 4iiu_A           25 MSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHGA  104 (267)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            346899999999999999999999999997766543 32221    11111222355689999988887765       7


Q ss_pred             CCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHH-----hCCCCCCCeEEEeccceecCCcccccccCCCc
Q 017977          117 STAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLIN-----ESPEGVRPSVLELVKPKYLMRAAHQEMITWLS  188 (363)
Q Consensus       117 ~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~-----~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~  188 (363)
                      +|+|||+||.....   ....+..+..+++|+.++.++++++.     +  .+..++|++||..+.++       .+...
T Consensus       105 id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~~~g~iv~isS~~~~~~-------~~~~~  175 (267)
T 4iiu_A          105 WYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGA--RQGGRIITLSSVSGVMG-------NRGQV  175 (267)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TSCEEEEEECCHHHHHC-------CTTCH
T ss_pred             ccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc--CCCcEEEEEcchHhccC-------CCCCc
Confidence            89999999975432   23566778899999999999999874     3  45667999999855433       23334


Q ss_pred             chhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHH
Q 017977          189 DYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDD  268 (363)
Q Consensus       189 ~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  268 (363)
                      .|..+|.+...|.+      .+.. .+.. .|+++.+++||.+.++..........  ......++      ..+.+++|
T Consensus       176 ~Y~asKaa~~~~~~------~la~-e~~~-~gi~v~~v~PG~v~t~~~~~~~~~~~--~~~~~~p~------~~~~~~ed  239 (267)
T 4iiu_A          176 NYSAAKAGIIGATK------ALAI-ELAK-RKITVNCIAPGLIDTGMIEMEESALK--EAMSMIPM------KRMGQAEE  239 (267)
T ss_dssp             HHHHHHHHHHHHHH------HHHH-HHGG-GTEEEEEEEECSBCSTTCCCCHHHHH--HHHHTCTT------CSCBCHHH
T ss_pred             hhHHHHHHHHHHHH------HHHH-HHhh-cCeEEEEEEEeeecCCcccccHHHHH--HHHhcCCC------CCCcCHHH
Confidence            55555433222221      1111 1122 38999999999999875433222111  22222232      23788999


Q ss_pred             HHHHHHHHhcCCC--CCc-eEEeeCC
Q 017977          269 IVNLIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       269 ~a~a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      +|+++..++....  ..| ++++.+|
T Consensus       240 va~~~~~L~s~~~~~itG~~i~vdGG  265 (267)
T 4iiu_A          240 VAGLASYLMSDIAGYVTRQVISINGG  265 (267)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHhCCcccCccCCEEEeCCC
Confidence            9999999987543  344 7887765

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.83  E-value=3.8e-20  Score=159.69  Aligned_cols=205  Identities=11%  Similarity=0.039  Sum_probs=141.0

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc-------CCCEEEE
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVVN  122 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~Vi~  122 (363)
                      +++|+||||+|+||++++++|+++|++|++++|+..+....        ...+|+.|.+++.++++       ++|+|||
T Consensus        22 ~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~--------~~~~d~~d~~~v~~~~~~~~~~~g~iD~li~   93 (251)
T 3orf_A           22 SKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNADH--------SFTIKDSGEEEIKSVIEKINSKSIKVDTFVC   93 (251)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTSSE--------EEECSCSSHHHHHHHHHHHHTTTCCEEEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccccc--------ceEEEeCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            46899999999999999999999999999999988654321        23467888887776664       4699999


Q ss_pred             ccCCCCCC----CCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhcc
Q 017977          123 LAGTPIGT----RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLV  198 (363)
Q Consensus       123 ~a~~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~  198 (363)
                      +||.....    ....+..+..+++|+.++.++++++.+......++|++||..+.++       .+....|..+     
T Consensus        94 ~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~-------~~~~~~Y~~s-----  161 (251)
T 3orf_A           94 AAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNR-------TSGMIAYGAT-----  161 (251)
T ss_dssp             CCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC-------CTTBHHHHHH-----
T ss_pred             CCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccC-------CCCCchhHHH-----
Confidence            99964321    2335567788999999999999999873111247999999854322       2223344444     


Q ss_pred             cchhhHHHHHHHHHHHhcc----CCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHHH
Q 017977          199 SFNRGVLVCREWEGTALKV----NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY  274 (363)
Q Consensus       199 ~y~~~k~~~~~~~~~~~~~----~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~  274 (363)
                           |.....+.......    ..++++++++||.+.++..       .  ....      ......+++++|+|++++
T Consensus       162 -----Kaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~-------~--~~~~------~~~~~~~~~~~dva~~i~  221 (251)
T 3orf_A          162 -----KAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTN-------R--KYMS------DANFDDWTPLSEVAEKLF  221 (251)
T ss_dssp             -----HHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHH-------H--HHCT------TSCGGGSBCHHHHHHHHH
T ss_pred             -----HHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcch-------h--hhcc------cccccccCCHHHHHHHHH
Confidence                 43333333332222    2489999999998876421       1  0011      122345789999999999


Q ss_pred             HHhcC---CCCCc-eEEeeCCCCc
Q 017977          275 EALSN---PSYRG-VINGTAPNPV  294 (363)
Q Consensus       275 ~~~~~---~~~~g-~~~i~~~~~~  294 (363)
                      .++..   ....| .+++..++..
T Consensus       222 ~l~~~~~~~~~tG~~i~v~~g~~~  245 (251)
T 3orf_A          222 EWSTNSDSRPTNGSLVKFETKSKV  245 (251)
T ss_dssp             HHHHCGGGCCCTTCEEEEEEETTE
T ss_pred             HHhcCccccCCcceEEEEecCCcc
Confidence            99987   23344 8888776543

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.83  E-value=2.4e-20  Score=161.99  Aligned_cols=230  Identities=13%  Similarity=0.024  Sum_probs=139.8

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCC-CCccccCcccccCcchHHhhcc-------CCCE
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTA  119 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~d~  119 (363)
                      ..+++|+||||+|+||++++++|+++|++|++++|+....+..... ........+|+.|.+++.++++       ++|+
T Consensus         7 l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   86 (261)
T 3n74_A            7 LEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVDI   86 (261)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence            3457999999999999999999999999999999988664433211 1112245689999988877765       6899


Q ss_pred             EEEccCCCCCC----CCChhhHHHHHHHHHHHHHHHHHHHHhC-C-C----CCCCeEEEeccceecCCcccccccCCCcc
Q 017977          120 VVNLAGTPIGT----RWSSEIKKEIKESRIRVTSKVVDLINES-P-E----GVRPSVLELVKPKYLMRAAHQEMITWLSD  189 (363)
Q Consensus       120 Vi~~a~~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~----~~~~~v~~SS~~~~yg~~~~~e~~~~~~~  189 (363)
                      |||+||.....    ..+.+..+..+++|+.++.++++++.+. . .    ...++|++||..+..+       .+....
T Consensus        87 li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-------~~~~~~  159 (261)
T 3n74_A           87 LVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRP-------RPNLAW  159 (261)
T ss_dssp             EEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSC-------CTTCHH
T ss_pred             EEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCC-------CCCccH
Confidence            99999974321    1255667889999999999888887652 0 1    1335999999843221       223334


Q ss_pred             hhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCccc-chHHHHHHHhCCCCCCCCCccccccHHH
Q 017977          190 YCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALA-KMIPLFMMFAGGPLGSGQQWFSWIHLDD  268 (363)
Q Consensus       190 ~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~D  268 (363)
                      |..+|.+...|.++       ....+. ..+++++.++|+.+.++...... ......    ...+........+++++|
T Consensus       160 Y~asKaa~~~~~~~-------la~e~~-~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~d  227 (261)
T 3n74_A          160 YNATKGWVVSVTKA-------LAIELA-PAKIRVVALNPVAGETPLLTTFMGEDSEEI----RKKFRDSIPMGRLLKPDD  227 (261)
T ss_dssp             HHHHHHHHHHHHHH-------HHHHHG-GGTEEEEEEEEC-----------------------------CTTSSCCCHHH
T ss_pred             HHHHHHHHHHHHHH-------HHHHhh-hcCcEEEEEecCcccChhhhhhcccCcHHH----HHHHhhcCCcCCCcCHHH
Confidence            65554333222211       111111 13899999999999887432110 000000    001111122335899999


Q ss_pred             HHHHHHHHhcCCC--CCc-eEEeeCCCCcCH
Q 017977          269 IVNLIYEALSNPS--YRG-VINGTAPNPVRL  296 (363)
Q Consensus       269 ~a~a~~~~~~~~~--~~g-~~~i~~~~~~s~  296 (363)
                      +|++++.++....  ..| ++++.+|..++-
T Consensus       228 va~~~~~l~s~~~~~itG~~i~vdgG~~~~~  258 (261)
T 3n74_A          228 LAEAAAFLCSPQASMITGVALDVDGGRSIGG  258 (261)
T ss_dssp             HHHHHHHHTSGGGTTCCSCEEEESTTTTC--
T ss_pred             HHHHHHHHcCCcccCcCCcEEEecCCcccCC
Confidence            9999999986443  344 899988866543

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.83  E-value=2.5e-20  Score=160.41  Aligned_cols=221  Identities=17%  Similarity=0.121  Sum_probs=145.3

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCC-CCccccCcccccCcchHHhhcc-------CCCEE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTAV  120 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~d~V  120 (363)
                      .+++++||||+|+||+++++.|+++|++|++++|+.+........ ........+|+.|.+++.++++       ++|+|
T Consensus         5 ~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   84 (247)
T 3rwb_A            5 AGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGIDIL   84 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEE
Confidence            457999999999999999999999999999999987654332111 1122255689999988887765       68999


Q ss_pred             EEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCC-CCCeEEEeccceecCCcccccccCCCcchhhhh
Q 017977          121 VNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLELVKPKYLMRAAHQEMITWLSDYCAKV  194 (363)
Q Consensus       121 i~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~-~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~  194 (363)
                      ||+||.....   ..+.+..+..+++|+.++.++++++.+.  ..+ ..++|++||..+..+       .+....|..+|
T Consensus        85 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------~~~~~~Y~asK  157 (247)
T 3rwb_A           85 VNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAG-------TPNMAAYVAAK  157 (247)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHT-------CTTCHHHHHHH
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccC-------CCCchhhHHHH
Confidence            9999975332   3355677889999999999998884432  033 567999999854332       23344566655


Q ss_pred             hhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCc--ccchHHHHHHHhCCCCCCCCCccccccHHHHHHH
Q 017977          195 YCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA--LAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL  272 (363)
Q Consensus       195 ~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a  272 (363)
                      .+...+.++       ....+. ..|+++..++||.+.++....  ...........  .++      ..+..++|+|++
T Consensus       158 aa~~~~~~~-------la~e~~-~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~--~~~------~r~~~pedva~~  221 (247)
T 3rwb_A          158 GGVIGFTRA-------LATELG-KYNITANAVTPGLIESDGVKASPHNEAFGFVEML--QAM------KGKGQPEHIADV  221 (247)
T ss_dssp             HHHHHHHHH-------HHHHHG-GGTEEEEEEEECSBCCHHHHTSGGGGGHHHHHHH--SSS------CSCBCHHHHHHH
T ss_pred             HHHHHHHHH-------HHHHhh-hcCeEEEEEeeCcCcCccccccChhHHHHHHhcc--ccc------CCCcCHHHHHHH
Confidence            433333221       111111 238999999999998763211  01111111110  122      235789999999


Q ss_pred             HHHHhcCCC--CCc-eEEeeCCC
Q 017977          273 IYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       273 ~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      +..++....  ..| ++++.+|.
T Consensus       222 v~~L~s~~~~~itG~~i~vdGG~  244 (247)
T 3rwb_A          222 VSFLASDDARWITGQTLNVDAGM  244 (247)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTS
T ss_pred             HHHHhCccccCCCCCEEEECCCc
Confidence            999987643  344 78877763

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=99.83  E-value=2.4e-19  Score=152.55  Aligned_cols=214  Identities=14%  Similarity=0.084  Sum_probs=149.8

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc-------CCCEEEEc
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVVNL  123 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~Vi~~  123 (363)
                      |+||||||++.||+++++.|+++|++|.+++|+..................+|+.|.++++++++       ++|++||+
T Consensus         3 K~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLVNN   82 (247)
T 3ged_A            3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVNN   82 (247)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            68999999999999999999999999999999987665554444434456789999988877654       68999999


Q ss_pred             cCCCCC---CCCChhhHHHHHHHHHHHHHHHHHHHHhC-CCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhccc
Q 017977          124 AGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVS  199 (363)
Q Consensus       124 a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~~  199 (363)
                      ||....   ...+.+..+..+++|+.++..+.+++.+. ..+..++|++||..+..+       .+....|..+|.+...
T Consensus        83 AG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~~~~-------~~~~~~Y~asKaal~~  155 (247)
T 3ged_A           83 ACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQS-------EPDSEAYASAKGGIVA  155 (247)
T ss_dssp             CCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGTSC-------CTTCHHHHHHHHHHHH
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeecccccC-------CCCCHHHHHHHHHHHH
Confidence            997544   23456778899999999998888777653 123367999999854322       3344567777655544


Q ss_pred             chhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHHHHHhcC
Q 017977          200 FNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN  279 (363)
Q Consensus       200 y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~  279 (363)
                      ++++         ...+...++++..|.||.+-.+.....   ..  ......|++      .+...+|+|++++.+++.
T Consensus       156 ltk~---------lA~ela~~IrVN~I~PG~i~t~~~~~~---~~--~~~~~~Pl~------R~g~pediA~~v~fL~s~  215 (247)
T 3ged_A          156 LTHA---------LAMSLGPDVLVNCIAPGWINVTEQQEF---TQ--EDCAAIPAG------KVGTPKDISNMVLFLCQQ  215 (247)
T ss_dssp             HHHH---------HHHHHTTTSEEEEEEECSBCCCC---C---CH--HHHHTSTTS------SCBCHHHHHHHHHHHHHC
T ss_pred             HHHH---------HHHHHCCCCEEEEEecCcCCCCCcHHH---HH--HHHhcCCCC------CCcCHHHHHHHHHHHHhC
Confidence            4432         111112389999999999876643221   11  112223332      257799999999999975


Q ss_pred             CCCCc-eEEeeCC
Q 017977          280 PSYRG-VINGTAP  291 (363)
Q Consensus       280 ~~~~g-~~~i~~~  291 (363)
                      .-..| ++.+.+|
T Consensus       216 ~~iTG~~i~VDGG  228 (247)
T 3ged_A          216 DFITGETIIVDGG  228 (247)
T ss_dssp             SSCCSCEEEESTT
T ss_pred             CCCCCCeEEECcC
Confidence            44555 7777766

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.83  E-value=1.5e-20  Score=162.39  Aligned_cols=226  Identities=15%  Similarity=0.082  Sum_probs=141.3

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCC-CCccccCcccccCcchHHhhcc-------CCCEE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTAV  120 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~d~V  120 (363)
                      .+++|+||||+|+||++++++|+++|++|++++|+..+....... ........+|+.|.+++.++++       .+|+|
T Consensus         5 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   84 (253)
T 1hxh_A            5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVL   84 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            347899999999999999999999999999999987554322110 1112245689999888877665       47999


Q ss_pred             EEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhhhh
Q 017977          121 VNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVY  195 (363)
Q Consensus       121 i~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~  195 (363)
                      ||+||.....   ....+..+..+++|+.++..+.+++.+.  ..+ .++|++||.++..+       .+....|..+|.
T Consensus        85 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~-------~~~~~~Y~~sK~  156 (253)
T 1hxh_A           85 VNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLP-------IEQYAGYSASKA  156 (253)
T ss_dssp             EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSC-------CTTBHHHHHHHH
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcCC-------CCCCccHHHHHH
Confidence            9999975332   2345667889999999877776655432  145 78999999843221       223335555543


Q ss_pred             hcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCc-c-cchHHHHHHHhCCCCCCCCCccccccHHHHHHHH
Q 017977          196 CLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA-L-AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLI  273 (363)
Q Consensus       196 ~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~  273 (363)
                      +...+.++      ...+......|++++++||+.++++.... . ......  .......  ......+.+++|+|+++
T Consensus       157 a~~~~~~~------la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~--~~~~~~~--~~p~~~~~~~~dvA~~~  226 (253)
T 1hxh_A          157 AVSALTRA------AALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKE--MVLHDPK--LNRAGRAYMPERIAQLV  226 (253)
T ss_dssp             HHHHHHHH------HHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHH--HHBCBTT--TBTTCCEECHHHHHHHH
T ss_pred             HHHHHHHH------HHHHhhhcCCCeEEEEEEeCCccCchhhhccchhhhHH--HHhhhhc--cCccCCCCCHHHHHHHH
Confidence            33322221      11111111128999999999999873211 0 000000  0111000  01112478999999999


Q ss_pred             HHHhcCCC--CCc-eEEeeCCC
Q 017977          274 YEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       274 ~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      +.++..+.  ..| .+++.+|.
T Consensus       227 ~~l~s~~~~~~tG~~~~vdgG~  248 (253)
T 1hxh_A          227 LFLASDESSVMSGSELHADNSI  248 (253)
T ss_dssp             HHHHSGGGTTCCSCEEEESSSC
T ss_pred             HHHcCccccCCCCcEEEECCCc
Confidence            99997643  344 77777763

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.83  E-value=1.1e-19  Score=155.62  Aligned_cols=218  Identities=15%  Similarity=0.127  Sum_probs=139.3

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhc-------cCCCEEEE
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI-------QGSTAVVN  122 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-------~~~d~Vi~  122 (363)
                      +++++||||+|+||++++++|+++|++|++++|+.++......    .....+|+.| +++.+++       .++|+|||
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~----~~~~~~D~~~-~~~~~~~~~~~~~~g~id~lv~   76 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQSLG----AVPLPTDLEK-DDPKGLVKRALEALGGLHVLVH   76 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHT----CEEEECCTTT-SCHHHHHHHHHHHHTSCCEEEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhhC----cEEEecCCch-HHHHHHHHHHHHHcCCCCEEEE
Confidence            3689999999999999999999999999999998765221111    1244578888 7666554       37899999


Q ss_pred             ccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhc
Q 017977          123 LAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCL  197 (363)
Q Consensus       123 ~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~  197 (363)
                      +||.....   ..+.+..+..+++|+.++.++++++.+.  ..+.+++|++||.++ +...    ..+....|..+|.+.
T Consensus        77 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~-~~~~----~~~~~~~Y~~sK~a~  151 (239)
T 2ekp_A           77 AAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTT-FTAG----GPVPIPAYTTAKTAL  151 (239)
T ss_dssp             CCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG-TSCC----TTSCCHHHHHHHHHH
T ss_pred             CCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhh-ccCC----CCCCCccHHHHHHHH
Confidence            99974332   2356677889999999999988887532  135678999999843 3210    012334555554332


Q ss_pred             ccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHH-HhCCCCCCCCCccccccHHHHHHHHHHH
Q 017977          198 VSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMM-FAGGPLGSGQQWFSWIHLDDIVNLIYEA  276 (363)
Q Consensus       198 ~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~D~a~a~~~~  276 (363)
                      ..+.+      . ....+. ..|++++++||+.+.++.............. ....++      ..+.+++|+|++++.+
T Consensus       152 ~~~~~------~-la~e~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~------~~~~~~~dvA~~~~~l  217 (239)
T 2ekp_A          152 LGLTR------A-LAKEWA-RLGIRVNLLCPGYVETEFTLPLRQNPELYEPITARIPM------GRWARPEEIARVAAVL  217 (239)
T ss_dssp             HHHHH------H-HHHHHG-GGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHTTCTT------SSCBCHHHHHHHHHHH
T ss_pred             HHHHH------H-HHHHhh-hcCcEEEEEEeCCccCchhhccccCHHHHHHHHhcCCC------CCCcCHHHHHHHHHHH
Confidence            22221      0 111111 2389999999999987742111000011111 111222      2378999999999999


Q ss_pred             hcCCC--CCc-eEEeeCC
Q 017977          277 LSNPS--YRG-VINGTAP  291 (363)
Q Consensus       277 ~~~~~--~~g-~~~i~~~  291 (363)
                      +....  ..| .+++.+|
T Consensus       218 ~s~~~~~~tG~~~~vdgG  235 (239)
T 2ekp_A          218 CGDEAEYLTGQAVAVDGG  235 (239)
T ss_dssp             TSGGGTTCCSCEEEESTT
T ss_pred             cCchhcCCCCCEEEECCC
Confidence            86532  345 7777765

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.83  E-value=1.4e-20  Score=166.83  Aligned_cols=219  Identities=11%  Similarity=0.041  Sum_probs=137.3

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccC----CCCCccccCcccccCcchHHhhcc-------C
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (363)
                      ..+++|+||||+|+||++++++|+++|++|++++|+........    ..........+|+.|.+++.++++       +
T Consensus        29 l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  108 (301)
T 3tjr_A           29 FDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGG  108 (301)
T ss_dssp             STTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCC
Confidence            45578999999999999999999999999999999876543321    111122245689999988887765       7


Q ss_pred             CCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCC-CCCeEEEeccceecCCcccccccCCCcch
Q 017977          117 STAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLELVKPKYLMRAAHQEMITWLSDY  190 (363)
Q Consensus       117 ~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~-~~~~v~~SS~~~~yg~~~~~e~~~~~~~~  190 (363)
                      +|+|||+||.....   ..+.+..+..+++|+.++.++++++.+.  ..+ ..++|++||..+.++       .+....|
T Consensus       109 id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~-------~~~~~~Y  181 (301)
T 3tjr_A          109 VDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVP-------NAGLGTY  181 (301)
T ss_dssp             CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSC-------CTTBHHH
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCC-------CCCchHH
Confidence            89999999975332   3456677889999999999999987542  022 457999999854332       2333455


Q ss_pred             hhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhC---CCCCCCCCccccccHH
Q 017977          191 CAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAG---GPLGSGQQWFSWIHLD  267 (363)
Q Consensus       191 ~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~i~v~  267 (363)
                      ..+|.+...+.+       .....+. ..|+++++++||.+.++.................   ..++.......+++++
T Consensus       182 ~asKaa~~~~~~-------~la~e~~-~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe  253 (301)
T 3tjr_A          182 GVAKYGVVGLAE-------TLAREVK-PNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDESVSAD  253 (301)
T ss_dssp             HHHHHHHHHHHH-------HHHHHHG-GGTEEEEEECCSCCCSSHHHHHHHHC----------------------CCCHH
T ss_pred             HHHHHHHHHHHH-------HHHHHhc-ccCcEEEEEECCccccccccccccccchhhccccChhhhccccccccCCCCHH
Confidence            555433222221       1111111 2389999999999986531110000000000000   1112222334689999


Q ss_pred             HHHHHHHHHhcCCC
Q 017977          268 DIVNLIYEALSNPS  281 (363)
Q Consensus       268 D~a~a~~~~~~~~~  281 (363)
                      |+|++++.+++.+.
T Consensus       254 dvA~~i~~~l~~~~  267 (301)
T 3tjr_A          254 DVARLTADAILANR  267 (301)
T ss_dssp             HHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHhcCC
Confidence            99999999998653

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.83  E-value=8.8e-20  Score=155.81  Aligned_cols=205  Identities=18%  Similarity=0.139  Sum_probs=127.9

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc-------CCCEEEE
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVVN  122 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~Vi~  122 (363)
                      +++|+||||+|+||++++++|+++|++|++++|+..+...............+|+.|.+++.++++       ++|+|||
T Consensus         5 ~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~   84 (234)
T 2ehd_A            5 KGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSALVN   84 (234)
T ss_dssp             CCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            368999999999999999999999999999999875543322111112244679999888877664       6899999


Q ss_pred             ccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHH----HhCCCCCCCeEEEeccceecCCcccccccCCCcchhhhhh
Q 017977          123 LAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVY  195 (363)
Q Consensus       123 ~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~  195 (363)
                      +||.....   ....+..+..+++|+.++.++++++    .+  .+.+++|++||.++ +.      ..+....|..+|.
T Consensus        85 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~~~~~iv~isS~~~-~~------~~~~~~~Y~~sK~  155 (234)
T 2ehd_A           85 NAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLR--RGGGTIVNVGSLAG-KN------PFKGGAAYNASKF  155 (234)
T ss_dssp             CCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHT--TTCEEEEEECCTTT-TS------CCTTCHHHHHHHH
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--CCCcEEEEECCchh-cC------CCCCCchhhHHHH
Confidence            99974321   2345667889999999987665554    44  56778999999843 21      1122334544432


Q ss_pred             hcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHHHH
Q 017977          196 CLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE  275 (363)
Q Consensus       196 ~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~  275 (363)
                      +...+.+      .+.. .+. ..|++++++||+.+.++.....    +       ..       +.+++++|+|++++.
T Consensus       156 a~~~~~~------~la~-e~~-~~gi~v~~v~Pg~v~t~~~~~~----~-------~~-------~~~~~~~dvA~~~~~  209 (234)
T 2ehd_A          156 GLLGLAG------AAML-DLR-EANVRVVNVLPGSVDTGFAGNT----P-------GQ-------AWKLKPEDVAQAVLF  209 (234)
T ss_dssp             HHHHHHH------HHHH-HHG-GGTEEEEEEECC----------------------------------CCHHHHHHHHHH
T ss_pred             HHHHHHH------HHHH-HHh-hcCcEEEEEEeCCCcCCccccc----c-------cc-------cCCCCHHHHHHHHHH
Confidence            2211111      1111 111 2389999999999876532110    0       00       115799999999999


Q ss_pred             HhcCCC--CCceEEee
Q 017977          276 ALSNPS--YRGVINGT  289 (363)
Q Consensus       276 ~~~~~~--~~g~~~i~  289 (363)
                      ++..+.  ..|...+.
T Consensus       210 l~~~~~~~~~g~~~~~  225 (234)
T 2ehd_A          210 ALEMPGHAMVSEIELR  225 (234)
T ss_dssp             HHHSCCSSCCCEEECC
T ss_pred             HhCCCcccccceEEEe
Confidence            998754  34444443

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.83  E-value=7e-20  Score=158.78  Aligned_cols=223  Identities=18%  Similarity=0.135  Sum_probs=143.5

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCc--cccc----CCCCCccccCcccccCcchHHhhcc-------C
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK--AELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~--~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (363)
                      +++++||||+|+||++++++|+++|++|++++|+...  ....    ...........+|+.|.+++.++++       +
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   81 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGG   81 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            3689999999999999999999999999999998765  3221    1111122245689999988877765       7


Q ss_pred             CCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCC-CCeEEEeccceecCCcccccccCCCcch
Q 017977          117 STAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGV-RPSVLELVKPKYLMRAAHQEMITWLSDY  190 (363)
Q Consensus       117 ~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~-~~~v~~SS~~~~yg~~~~~e~~~~~~~~  190 (363)
                      +|+|||+||.....   ..+.+..+..+++|+.++.++++++.+.  ..+. .++|++||.++..+       .+....|
T Consensus        82 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------~~~~~~Y  154 (258)
T 3a28_C           82 FDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQG-------FPILSAY  154 (258)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSC-------CTTCHHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccC-------CCCchhH
Confidence            89999999975332   2355677889999999999998888752  1244 68999999843222       2233455


Q ss_pred             hhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCc-ccch--------HHHHH-HHhCCCCCCCCCc
Q 017977          191 CAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA-LAKM--------IPLFM-MFAGGPLGSGQQW  260 (363)
Q Consensus       191 ~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~-~~~~--------~~~~~-~~~~~~~~~~~~~  260 (363)
                      ..+|.+...+.++       ....+. ..|+++++++||.+.++.... ....        ..... .....++      
T Consensus       155 ~~sK~a~~~~~~~-------la~e~~-~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~------  220 (258)
T 3a28_C          155 STTKFAVRGLTQA-------AAQELA-PKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIAL------  220 (258)
T ss_dssp             HHHHHHHHHHHHH-------HHHHHG-GGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHHTTCTT------
T ss_pred             HHHHHHHHHHHHH-------HHHHHH-hhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHHHHHhcCCC------
Confidence            5554332222211       111111 238999999999997653111 0000        00011 1111121      


Q ss_pred             cccccHHHHHHHHHHHhcCCC--CCc-eEEeeCCCC
Q 017977          261 FSWIHLDDIVNLIYEALSNPS--YRG-VINGTAPNP  293 (363)
Q Consensus       261 ~~~i~v~D~a~a~~~~~~~~~--~~g-~~~i~~~~~  293 (363)
                      ..+.+++|+|++++.++....  ..| .+++.+|..
T Consensus       221 ~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~  256 (258)
T 3a28_C          221 GRPSVPEDVAGLVSFLASENSNYVTGQVMLVDGGML  256 (258)
T ss_dssp             SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSC
T ss_pred             CCccCHHHHHHHHHHHhCcccCCCCCCEEEECCCEe
Confidence            237899999999999997543  344 788877643

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.83  E-value=6.1e-21  Score=166.35  Aligned_cols=225  Identities=17%  Similarity=0.149  Sum_probs=141.7

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccc----cCCC--CCccccCcccccCcchHHhhcc-------
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL----IFPG--KKTRFFPGVMIAEEPQWRDCIQ-------  115 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~~--~~~~~~~~~d~~~~~~~~~~~~-------  115 (363)
                      .+++|+||||+|+||+++++.|+++|++|++++|+..+...    +...  ........+|+.|.+++.++++       
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (267)
T 2gdz_A            6 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG   85 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence            34689999999999999999999999999999998754321    1111  1112244679999988887765       


Q ss_pred             CCCEEEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhC-C-CC---CCCeEEEeccceecCCcccccccCCCcch
Q 017977          116 GSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES-P-EG---VRPSVLELVKPKYLMRAAHQEMITWLSDY  190 (363)
Q Consensus       116 ~~d~Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~~---~~~~v~~SS~~~~yg~~~~~e~~~~~~~~  190 (363)
                      ++|+|||+||..     ..+..+..+++|+.++..+.+++.+. . .+   ..++|++||.++..+       .+....|
T Consensus        86 ~id~lv~~Ag~~-----~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------~~~~~~Y  153 (267)
T 2gdz_A           86 RLDILVNNAGVN-----NEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMP-------VAQQPVY  153 (267)
T ss_dssp             CCCEEEECCCCC-----CSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC-------CTTCHHH
T ss_pred             CCCEEEECCCCC-----ChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCC-------CCCCchH
Confidence            479999999964     23446788999999765554444321 0 22   567999999843221       2223345


Q ss_pred             hhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccc---------hHHHHHHHhCCCCCCCCCcc
Q 017977          191 CAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAK---------MIPLFMMFAGGPLGSGQQWF  261 (363)
Q Consensus       191 ~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~  261 (363)
                      ..+|.+...+.++      +.........|+++++++||.+.++.......         +...+..        .....
T Consensus       154 ~~sK~a~~~~~~~------~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~  219 (267)
T 2gdz_A          154 CASKHGIVGFTRS------AALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKD--------MIKYY  219 (267)
T ss_dssp             HHHHHHHHHHHHH------HHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHH--------HHHHH
T ss_pred             HHHHHHHHHHHHH------HHHHHHhccCCcEEEEEecCcCcchhhhccccccccchhhhHHHHHHH--------Hhccc
Confidence            5554332222211      00011112348999999999997763111000         0000000        00113


Q ss_pred             ccccHHHHHHHHHHHhcCCCCCc-eEEeeCCCCcCHHHH
Q 017977          262 SWIHLDDIVNLIYEALSNPSYRG-VINGTAPNPVRLAEM  299 (363)
Q Consensus       262 ~~i~v~D~a~a~~~~~~~~~~~g-~~~i~~~~~~s~~el  299 (363)
                      .+++++|+|++++.+++.....| ++++.+++.+++.|+
T Consensus       220 ~~~~~~dvA~~v~~l~s~~~~~G~~~~v~gg~~~~~~~~  258 (267)
T 2gdz_A          220 GILDPPLIANGLITLIEDDALNGAIMKITTSKGIHFQDY  258 (267)
T ss_dssp             CCBCHHHHHHHHHHHHHCTTCSSCEEEEETTTEEEECCC
T ss_pred             cCCCHHHHHHHHHHHhcCcCCCCcEEEecCCCcccccCc
Confidence            47899999999999998765445 999999887776553

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.83  E-value=1.9e-20  Score=163.63  Aligned_cols=232  Identities=11%  Similarity=0.011  Sum_probs=149.1

Q ss_pred             CCccEEEEecCc--chHHHHHHHHHHhCCCEEEEEeCCCCccccc---CCCCCccccCcccccCcchHHhhcc-------
Q 017977           48 ASQMTVSVTGAT--GFIGRRLVQRLQADNHQVRVLTRSRSKAELI---FPGKKTRFFPGVMIAEEPQWRDCIQ-------  115 (363)
Q Consensus        48 ~~~~~vlVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~~~~~~~~~d~~~~~~~~~~~~-------  115 (363)
                      ...++|+||||+  |+||+++++.|+++|++|++++|+....+..   ...........+|+.|.+++.++++       
T Consensus        12 ~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   91 (271)
T 3ek2_A           12 LDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTHWD   91 (271)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            445799999999  9999999999999999999999985332211   1111112355789999988887765       


Q ss_pred             CCCEEEEccCCCCC-------C-CCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCC
Q 017977          116 GSTAVVNLAGTPIG-------T-RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWL  187 (363)
Q Consensus       116 ~~d~Vi~~a~~~~~-------~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~  187 (363)
                      ++|+|||+||....       . ....+..+..+++|+.++.++++++.+......++|++||.++..+       .+..
T Consensus        92 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~-------~~~~  164 (271)
T 3ek2_A           92 SLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERA-------IPNY  164 (271)
T ss_dssp             CEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSB-------CTTT
T ss_pred             CCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccC-------CCCc
Confidence            67999999997432       1 1456778889999999999999999873112346999999844222       2333


Q ss_pred             cchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHH-HHHhCCCCCCCCCccccccH
Q 017977          188 SDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHL  266 (363)
Q Consensus       188 ~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v  266 (363)
                      ..|..+|.+...|.++       ....+. ..|+++++++||.+.++........-... ......++      ..+..+
T Consensus       165 ~~Y~asKaa~~~~~~~-------la~e~~-~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~------~~~~~p  230 (271)
T 3ek2_A          165 NTMGLAKAALEASVRY-------LAVSLG-AKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSPL------KRNVTI  230 (271)
T ss_dssp             THHHHHHHHHHHHHHH-------HHHHHH-TTTCEEEEEEECCC-----CCCHHHHHHHHHHHHHSTT------SSCCCH
T ss_pred             cchhHHHHHHHHHHHH-------HHHHHH-hcCcEEEEEecCcccchhhhcccchHHHHHHHHhcCCc------CCCCCH
Confidence            4566554333322221       111111 24899999999999987543221111111 11122222      236789


Q ss_pred             HHHHHHHHHHhcCCC--CCc-eEEeeCCCCcCHHHHH
Q 017977          267 DDIVNLIYEALSNPS--YRG-VINGTAPNPVRLAEMC  300 (363)
Q Consensus       267 ~D~a~a~~~~~~~~~--~~g-~~~i~~~~~~s~~el~  300 (363)
                      +|+|++++.++....  ..| .+++.+|..++..+++
T Consensus       231 edva~~i~~l~s~~~~~~tG~~i~vdgG~~~~~~~~~  267 (271)
T 3ek2_A          231 EQVGNAGAFLLSDLASGVTAEVMHVDSGFNAVVGGMA  267 (271)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSEEEEESTTGGGBCCCC-
T ss_pred             HHHHHHHHHHcCcccCCeeeeEEEECCCeeeehhhhh
Confidence            999999999997533  344 8999988766665554

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.82  E-value=1.1e-19  Score=155.34  Aligned_cols=200  Identities=19%  Similarity=0.161  Sum_probs=136.4

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCC-----CCCccccCcccccCcchHHhhcc-------CC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP-----GKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (363)
                      |++++||||+|+||++++++|+++|++|++++|+.++.+....     ......+..+|+.|.+++.++++       ++
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   81 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGDV   81 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSSC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence            5689999999999999999999999999999998765432211     11112244689999998888776       68


Q ss_pred             CEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC-CCCCCCeEEEeccceecCCcccccccCCCcchhhh
Q 017977          118 TAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAK  193 (363)
Q Consensus       118 d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~  193 (363)
                      |+|||+||.....   ..+.+..+..+++|+.++.++++++.+. ..+..++|++||..+.++       .+....|..+
T Consensus        82 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~-------~~~~~~Y~~s  154 (235)
T 3l77_A           82 DVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARL-------IPYGGGYVST  154 (235)
T ss_dssp             SEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSC-------CTTCHHHHHH
T ss_pred             CEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhccc-------CCCcchHHHH
Confidence            9999999975432   2356677889999999999999988652 123345777777744322       2222345444


Q ss_pred             hhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHH
Q 017977          194 VYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLI  273 (363)
Q Consensus       194 ~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~  273 (363)
                                |.....+.........+++++.++||.+..+......               .......++.++|+|+++
T Consensus       155 ----------Kaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~~~~~~---------------~~~~~~~~~~p~dva~~v  209 (235)
T 3l77_A          155 ----------KWAARALVRTFQIENPDVRFFELRPGAVDTYFGGSKP---------------GKPKEKGYLKPDEIAEAV  209 (235)
T ss_dssp             ----------HHHHHHHHHHHHHHCTTSEEEEEEECSBSSSTTTCCS---------------CCCGGGTCBCHHHHHHHH
T ss_pred             ----------HHHHHHHHHHHhhcCCCeEEEEEeCCccccccccccC---------------CcccccCCCCHHHHHHHH
Confidence                      3332222222222234899999999998765422110               011112478999999999


Q ss_pred             HHHhcCCC
Q 017977          274 YEALSNPS  281 (363)
Q Consensus       274 ~~~~~~~~  281 (363)
                      +.+++.+.
T Consensus       210 ~~l~~~~~  217 (235)
T 3l77_A          210 RCLLKLPK  217 (235)
T ss_dssp             HHHHTSCT
T ss_pred             HHHHcCCC
Confidence            99998776

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.82  E-value=7.8e-20  Score=157.77  Aligned_cols=210  Identities=11%  Similarity=0.064  Sum_probs=131.4

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCC----CCCccccCcccccCcchHHhhcc------CCC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ------GST  118 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~------~~d  118 (363)
                      .+++++||||+|+||+++++.|+++|++|++++|+....+....    .........+|+.|.+++.++++      ++|
T Consensus         6 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~id   85 (252)
T 3h7a_A            6 RNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAPLE   85 (252)
T ss_dssp             CSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSCEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCCce
Confidence            45789999999999999999999999999999998876443221    11222345689999998887776      679


Q ss_pred             EEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhh
Q 017977          119 AVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAK  193 (363)
Q Consensus       119 ~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~  193 (363)
                      ++||+||.....   ..+.+..+..+++|+.++.++++++...  ..+..++|++||.++.++       .+....|..+
T Consensus        86 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------~~~~~~Y~as  158 (252)
T 3h7a_A           86 VTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRG-------GSGFAAFASA  158 (252)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCC-------CTTCHHHHHH
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCC-------CCCCccHHHH
Confidence            999999975432   3456677889999999999888887532  134567999999854333       2333456665


Q ss_pred             hhhcccchhhHHHHHHHHHHHhccCCCceE-EEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHH
Q 017977          194 VYCLVSFNRGVLVCREWEGTALKVNKDVRL-ALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL  272 (363)
Q Consensus       194 ~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~-~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a  272 (363)
                      |.+...+.++       ....+. ..|+++ .+++||.+..+.....   .+...    .......... +.+++|+|++
T Consensus       159 Kaa~~~l~~~-------la~e~~-~~gi~v~n~v~PG~v~T~~~~~~---~~~~~----~~~~~~~~~~-~~~pedvA~~  222 (252)
T 3h7a_A          159 KFGLRAVAQS-------MARELM-PKNIHVAHLIIDSGVDTAWVRER---REQMF----GKDALANPDL-LMPPAAVAGA  222 (252)
T ss_dssp             HHHHHHHHHH-------HHHHHG-GGTEEEEEEEEC-----------------------------------CCHHHHHHH
T ss_pred             HHHHHHHHHH-------HHHHhh-hcCCEEEEEecCCccCChhhhcc---chhhh----hhhhhcCCcc-CCCHHHHHHH
Confidence            5433333221       111111 238999 8999999987643211   00000    0011111122 8899999999


Q ss_pred             HHHHhcCCC
Q 017977          273 IYEALSNPS  281 (363)
Q Consensus       273 ~~~~~~~~~  281 (363)
                      ++.++..+.
T Consensus       223 ~~~l~s~~~  231 (252)
T 3h7a_A          223 YWQLYQQPK  231 (252)
T ss_dssp             HHHHHHCCG
T ss_pred             HHHHHhCch
Confidence            999998765

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.82  E-value=8.2e-20  Score=159.85  Aligned_cols=223  Identities=12%  Similarity=0.032  Sum_probs=143.7

Q ss_pred             CccEEEEecCc--chHHHHHHHHHHhCCCEEEEEeCCCC---cccccCCCCCccccCcccccCcchHHhhcc-------C
Q 017977           49 SQMTVSVTGAT--GFIGRRLVQRLQADNHQVRVLTRSRS---KAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (363)
Q Consensus        49 ~~~~vlVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~---~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (363)
                      .+++|+||||+  |+||+++++.|+++|++|++++|+..   ....+...........+|+.|.+++.++++       +
T Consensus         5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   84 (275)
T 2pd4_A            5 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGS   84 (275)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            34789999999  99999999999999999999999875   111111100112245689999988877665       6


Q ss_pred             CCEEEEccCCCCC-------CCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcc
Q 017977          117 STAVVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSD  189 (363)
Q Consensus       117 ~d~Vi~~a~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~  189 (363)
                      +|+|||+||....       ...+.+..+..+++|+.++.++++++.+......++|++||.++.++       .+....
T Consensus        85 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~-------~~~~~~  157 (275)
T 2pd4_A           85 LDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKY-------MAHYNV  157 (275)
T ss_dssp             EEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSB-------CTTCHH
T ss_pred             CCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCC-------CCCchh
Confidence            7999999997432       13456677889999999999999999873111257999999744222       223334


Q ss_pred             hhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHH-HHHhCCCCCCCCCccccccHHH
Q 017977          190 YCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDD  268 (363)
Q Consensus       190 ~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D  268 (363)
                      |..+|.+...+.++       ....+. ..|+++++++||.+.++............ ......+++      .+.+++|
T Consensus       158 Y~asK~a~~~~~~~-------la~e~~-~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~------~~~~p~d  223 (275)
T 2pd4_A          158 MGLAKAALESAVRY-------LAVDLG-KHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLR------KNVSLEE  223 (275)
T ss_dssp             HHHHHHHHHHHHHH-------HHHHHH-TTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTS------SCCCHHH
T ss_pred             hHHHHHHHHHHHHH-------HHHHhh-hcCeEEEEEeeCccccchhhhccccHHHHHHHHhcCCcC------CCCCHHH
Confidence            55554332222211       111111 24899999999999987532211111111 111112221      2678999


Q ss_pred             HHHHHHHHhcCCC--CCc-eEEeeCCC
Q 017977          269 IVNLIYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       269 ~a~a~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      +|++++.++....  ..| .+++.++.
T Consensus       224 va~~~~~l~s~~~~~~tG~~~~vdgg~  250 (275)
T 2pd4_A          224 VGNAGMYLLSSLSSGVSGEVHFVDAGY  250 (275)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHhCccccCCCCCEEEECCCc
Confidence            9999999986532  345 67777763

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.82  E-value=1e-19  Score=157.95  Aligned_cols=222  Identities=17%  Similarity=0.115  Sum_probs=143.9

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCC-CccccCcccccCcchHHhhcc-------CCCEE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK-KTRFFPGVMIAEEPQWRDCIQ-------GSTAV  120 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~-------~~d~V  120 (363)
                      .+++++||||+|+||++++++|+++|++|++++|+.++.+...... .......+|+.|.+++.++++       .+|+|
T Consensus         5 ~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~l   84 (263)
T 2a4k_A            5 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGV   84 (263)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCcEE
Confidence            3478999999999999999999999999999999876543322111 112244689999988877665       57999


Q ss_pred             EEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhc
Q 017977          121 VNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCL  197 (363)
Q Consensus       121 i~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~  197 (363)
                      ||+||.....   ..+.+..+..+++|+.++.++++++.+......++|++||.++ ++       .+....|..+|.+.
T Consensus        85 vnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~-~~-------~~~~~~Y~asK~a~  156 (263)
T 2a4k_A           85 AHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAG-LG-------AFGLAHYAAGKLGV  156 (263)
T ss_dssp             EEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTT-CC-------HHHHHHHHHCSSHH
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchh-cC-------CCCcHHHHHHHHHH
Confidence            9999974332   2245566788999999999999999873111457999999843 22       11222344443222


Q ss_pred             ccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCccc-chHHHHHHHhCCCCCCCCCccccccHHHHHHHHHHH
Q 017977          198 VSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALA-KMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEA  276 (363)
Q Consensus       198 ~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~  276 (363)
                      ..+.+      . ....+. ..|+++++++||.+.++...... ....  ......++      ..+.+++|+|++++.+
T Consensus       157 ~~~~~------~-la~e~~-~~gi~v~~v~PG~v~t~~~~~~~~~~~~--~~~~~~p~------~~~~~p~dvA~~v~~l  220 (263)
T 2a4k_A          157 VGLAR------T-LALELA-RKGVRVNVLLPGLIQTPMTAGLPPWAWE--QEVGASPL------GRAGRPEEVAQAALFL  220 (263)
T ss_dssp             HHHHH------H-HHHHHT-TTTCEEEEEEECSBCCGGGTTSCHHHHH--HHHHTSTT------CSCBCHHHHHHHHHHH
T ss_pred             HHHHH------H-HHHHhh-hhCcEEEEEEeCcCcCchhhhcCHHHHH--HHHhcCCC------CCCcCHHHHHHHHHHH
Confidence            22211      1 111111 24899999999999887432211 1111  11222222      2378999999999999


Q ss_pred             hcCCC--CCc-eEEeeCCCCc
Q 017977          277 LSNPS--YRG-VINGTAPNPV  294 (363)
Q Consensus       277 ~~~~~--~~g-~~~i~~~~~~  294 (363)
                      +....  ..| .+++.++..+
T Consensus       221 ~s~~~~~~tG~~i~vdgG~~~  241 (263)
T 2a4k_A          221 LSEESAYITGQALYVDGGRSI  241 (263)
T ss_dssp             HSGGGTTCCSCEEEESTTTTT
T ss_pred             hCccccCCcCCEEEECCCccc
Confidence            87543  344 7778777543

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.82  E-value=7.2e-20  Score=159.45  Aligned_cols=223  Identities=15%  Similarity=-0.001  Sum_probs=141.9

Q ss_pred             CCccEEEEecCcc-hHHHHHHHHHHhCCCEEEEEeCCCCcccccC----CC-CCccccCcccccCcchHHhhcc------
Q 017977           48 ASQMTVSVTGATG-FIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PG-KKTRFFPGVMIAEEPQWRDCIQ------  115 (363)
Q Consensus        48 ~~~~~vlVtGatG-~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~-~~~~~~~~~d~~~~~~~~~~~~------  115 (363)
                      ..+++|+||||+| .||++++++|+++|++|++++|+........    .. .....+..+|+.|.+++.++++      
T Consensus        20 l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   99 (266)
T 3o38_A           20 LKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKA   99 (266)
T ss_dssp             TTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHh
Confidence            4457999999998 5999999999999999999999876533221    11 1122355689999988877765      


Q ss_pred             -CCCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CC-CCCCeEEEeccceecCCcccccccCCCc
Q 017977          116 -GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PE-GVRPSVLELVKPKYLMRAAHQEMITWLS  188 (363)
Q Consensus       116 -~~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~-~~~~~v~~SS~~~~yg~~~~~e~~~~~~  188 (363)
                       .+|+|||+||.....   ....+..+..+++|+.++.++++++...  .. +..++|++||..+..+       .+...
T Consensus       100 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~-------~~~~~  172 (266)
T 3o38_A          100 GRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRA-------QHSQS  172 (266)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCC-------CTTCH
T ss_pred             CCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCC-------CCCCc
Confidence             679999999974332   2355667889999999999999988763  11 4556999998844222       22334


Q ss_pred             chhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHH
Q 017977          189 DYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDD  268 (363)
Q Consensus       189 ~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  268 (363)
                      .|..+|.+...+.+      . ....+. ..|+++++++||.+.++....... .....     .+........+.+++|
T Consensus       173 ~Y~~sKaa~~~~~~------~-la~e~~-~~gi~v~~v~PG~v~t~~~~~~~~-~~~~~-----~~~~~~~~~r~~~~~d  238 (266)
T 3o38_A          173 HYAAAKAGVMALTR------C-SAIEAV-EFGVRINAVSPSIARHKFLEKTSS-SELLD-----RLASDEAFGRAAEPWE  238 (266)
T ss_dssp             HHHHHHHHHHHHHH------H-HHHHHG-GGTEEEEEEEECCCCC-----------------------CCTTSSCCCHHH
T ss_pred             hHHHHHHHHHHHHH------H-HHHHHH-HcCcEEEEEeCCcccchhhhccCc-HHHHH-----HHHhcCCcCCCCCHHH
Confidence            55555433222221      0 111111 238999999999998764321100 00000     0111122335789999


Q ss_pred             HHHHHHHHhcCCC--CCc-eEEeeCC
Q 017977          269 IVNLIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       269 ~a~a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      +|++++.++....  ..| ++++.+|
T Consensus       239 va~~i~~l~s~~~~~~tG~~i~vdgG  264 (266)
T 3o38_A          239 VAATIAFLASDYSSYMTGEVVSVSSQ  264 (266)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESSC
T ss_pred             HHHHHHHHcCccccCccCCEEEEcCC
Confidence            9999999987543  344 7888776

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.82  E-value=1.1e-19  Score=159.98  Aligned_cols=227  Identities=16%  Similarity=0.075  Sum_probs=145.9

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCccc--------------------ccCCCCCccccCcccccCc
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE--------------------LIFPGKKTRFFPGVMIAEE  107 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--------------------~~~~~~~~~~~~~~d~~~~  107 (363)
                      ..+++++||||+|+||+++++.|+++|++|++++|+.....                    .+...........+|+.|.
T Consensus         9 l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~   88 (286)
T 3uve_A            9 VEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDY   88 (286)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCH
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCH
Confidence            34579999999999999999999999999999999732111                    0111111222446899999


Q ss_pred             chHHhhcc-------CCCEEEEccCCCCCC----CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCC-CCCeEEEeccce
Q 017977          108 PQWRDCIQ-------GSTAVVNLAGTPIGT----RWSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLELVKPK  173 (363)
Q Consensus       108 ~~~~~~~~-------~~d~Vi~~a~~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~-~~~~v~~SS~~~  173 (363)
                      +++.++++       ++|++||+||.....    ..+.+..+..+++|+.++.++++++.+.  ..+ ..++|++||..+
T Consensus        89 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~  168 (286)
T 3uve_A           89 DALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGG  168 (286)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGG
T ss_pred             HHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchhh
Confidence            88887765       789999999975432    2356677889999999999999988653  012 457999999854


Q ss_pred             ecCCcccccccCCCcchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccch-----------
Q 017977          174 YLMRAAHQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKM-----------  242 (363)
Q Consensus       174 ~yg~~~~~e~~~~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~-----------  242 (363)
                      ..+       .+....|..+|.+...+.++       ....+. ..|+++..++||.+.++........           
T Consensus       169 ~~~-------~~~~~~Y~asKaa~~~~~~~-------la~e~~-~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  233 (286)
T 3uve_A          169 LKA-------YPHTGHYVAAKHGVVGLMRA-------FGVELG-QHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPG  233 (286)
T ss_dssp             TSC-------CTTCHHHHHHHHHHHHHHHH-------HHHHHG-GGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCC
T ss_pred             ccC-------CCCccHHHHHHHHHHHHHHH-------HHHHhc-ccCeEEEEEecCcccCCcccccchhhhccccccccc
Confidence            322       23334566554333322221       111111 2389999999999998754221000           


Q ss_pred             HHH-HHHHhCCCCCCCCCccccccHHHHHHHHHHHhcCCC--CCc-eEEeeCCCC
Q 017977          243 IPL-FMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS--YRG-VINGTAPNP  293 (363)
Q Consensus       243 ~~~-~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~--~~g-~~~i~~~~~  293 (363)
                      ... .....   ..... ...+.+++|+|++++.++....  ..| ++++.+|..
T Consensus       234 ~~~~~~~~~---~~~~~-p~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~  284 (286)
T 3uve_A          234 PDDMAPICQ---MFHTL-PIPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSC  284 (286)
T ss_dssp             HHHHHHHHH---TTCSS-SCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             hhhHHHHHH---hhhcc-CCCcCCHHHHHHHHHHHcCccccCCcCCEEeECCccc
Confidence            000 00000   00111 1357899999999999997543  344 888887743

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.82  E-value=2e-19  Score=155.15  Aligned_cols=211  Identities=18%  Similarity=0.126  Sum_probs=137.9

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc-------CCCEEEE
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVVN  122 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~Vi~  122 (363)
                      +++|+||||+|+||++++++|+++|++|++++|+..+.+.       .....+|+.|.++++++++       .+|+|||
T Consensus        21 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~-------~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~   93 (253)
T 2nm0_A           21 SRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEG-------FLAVKCDITDTEQVEQAYKEIEETHGPVEVLIA   93 (253)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT-------SEEEECCTTSHHHHHHHHHHHHHHTCSCSEEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhcc-------ceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            4689999999999999999999999999999998755332       1245689999988877665       4799999


Q ss_pred             ccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhc
Q 017977          123 LAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCL  197 (363)
Q Consensus       123 ~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~  197 (363)
                      +||.....   ....+..+..+++|+.++.++++++.+.  ..+..++|++||.++.++       .+....|..+    
T Consensus        94 nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~-------~~~~~~Y~as----  162 (253)
T 2nm0_A           94 NAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLG-------SAGQANYAAS----  162 (253)
T ss_dssp             ECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCC-------HHHHHHHHHH----
T ss_pred             CCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCC-------CCCcHHHHHH----
Confidence            99975332   2345567889999999999998877642  135678999999843222       1112234443    


Q ss_pred             ccchhhHHHHHHHHHHH-hc-cCCCceEEEEeeceEEeCCCCccc-chHHHHHHHhCCCCCCCCCccccccHHHHHHHHH
Q 017977          198 VSFNRGVLVCREWEGTA-LK-VNKDVRLALIRIGIVLGKDGGALA-KMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY  274 (363)
Q Consensus       198 ~~y~~~k~~~~~~~~~~-~~-~~~~~~~~ilRp~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~  274 (363)
                            |.....+.... .+ ...|+++++++|+.+.++...... ....  ......++      ..+++++|+|++++
T Consensus       163 ------K~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~--~~~~~~p~------~~~~~p~dvA~~i~  228 (253)
T 2nm0_A          163 ------KAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVLTDEQRA--NIVSQVPL------GRYARPEEIAATVR  228 (253)
T ss_dssp             ------HHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC---------CHH--HHHTTCTT------CSCBCHHHHHHHHH
T ss_pred             ------HHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcCHHHHH--HHHhcCCC------CCCcCHHHHHHHHH
Confidence                  43222222111 11 124899999999998776422110 1111  11111121      23789999999999


Q ss_pred             HHhcCCC--CCc-eEEeeCCC
Q 017977          275 EALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       275 ~~~~~~~--~~g-~~~i~~~~  292 (363)
                      .++..+.  ..| .+.+.+|.
T Consensus       229 ~l~s~~~~~~tG~~i~vdGG~  249 (253)
T 2nm0_A          229 FLASDDASYITGAVIPVDGGL  249 (253)
T ss_dssp             HHHSGGGTTCCSCEEEESTTT
T ss_pred             HHhCccccCCcCcEEEECCcc
Confidence            9987543  344 77777764

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.82  E-value=1.8e-19  Score=159.43  Aligned_cols=224  Identities=12%  Similarity=0.041  Sum_probs=145.5

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCc------------cc----ccCCCCCccccCcccccCcchHH
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK------------AE----LIFPGKKTRFFPGVMIAEEPQWR  111 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~------------~~----~~~~~~~~~~~~~~d~~~~~~~~  111 (363)
                      ..+++++||||+|+||+++++.|+++|++|++++|+...            ..    .+...........+|+.|.+++.
T Consensus        26 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~  105 (299)
T 3t7c_A           26 VEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQ  105 (299)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHH
Confidence            445799999999999999999999999999999997421            11    11111112224568999998887


Q ss_pred             hhcc-------CCCEEEEccCCCCCC----CCChhhHHHHHHHHHHHHHHHHHHHHhC---CCCCCCeEEEeccceecCC
Q 017977          112 DCIQ-------GSTAVVNLAGTPIGT----RWSSEIKKEIKESRIRVTSKVVDLINES---PEGVRPSVLELVKPKYLMR  177 (363)
Q Consensus       112 ~~~~-------~~d~Vi~~a~~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~~v~~SS~~~~yg~  177 (363)
                      ++++       ++|+|||+||.....    ..+.+..+..+++|+.++.++++++...   ..+..++|++||.++..+ 
T Consensus       106 ~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~~-  184 (299)
T 3t7c_A          106 AAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRG-  184 (299)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTSC-
T ss_pred             HHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccC-
Confidence            7765       689999999975332    2356677889999999999999987652   123567999999854322 


Q ss_pred             cccccccCCCcchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccc-----------hHHHH
Q 017977          178 AAHQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAK-----------MIPLF  246 (363)
Q Consensus       178 ~~~~e~~~~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~-----------~~~~~  246 (363)
                            .+....|..+|.+...+.++       ....+. ..|+++..++||.+.++.......           ....+
T Consensus       185 ------~~~~~~Y~asKaa~~~l~~~-------la~e~~-~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  250 (299)
T 3t7c_A          185 ------AENIGNYIASKHGLHGLMRT-------MALELG-PRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDF  250 (299)
T ss_dssp             ------CTTCHHHHHHHHHHHHHHHH-------HHHHHG-GGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHH
T ss_pred             ------CCCcchHHHHHHHHHHHHHH-------HHHHhc-ccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHH
Confidence                  23334566554333222211       111111 238999999999999875322100           00000


Q ss_pred             ----HHHhCCCCCCCCCccccccHHHHHHHHHHHhcCCC--CCc-eEEeeCCCC
Q 017977          247 ----MMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS--YRG-VINGTAPNP  293 (363)
Q Consensus       247 ----~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~--~~g-~~~i~~~~~  293 (363)
                          .....  +     ...+..++|+|++++.++....  ..| ++++.+|..
T Consensus       251 ~~~~~~~~~--~-----p~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~  297 (299)
T 3t7c_A          251 QVASRQMHV--L-----PIPYVEPADISNAILFLVSDDARYITGVSLPVDGGAL  297 (299)
T ss_dssp             HHHHHHHSS--S-----SCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHhhhhcc--c-----CcCCCCHHHHHHHHHHHhCcccccCcCCEEeeCCCcc
Confidence                01110  1     1347899999999999997543  344 888887753

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.82  E-value=2.8e-20  Score=163.25  Aligned_cols=225  Identities=15%  Similarity=0.059  Sum_probs=144.0

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccC----CCCC---ccccCcccccCcchHHhhcc------
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKK---TRFFPGVMIAEEPQWRDCIQ------  115 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~---~~~~~~~d~~~~~~~~~~~~------  115 (363)
                      .+++++||||+|+||++++++|+++|++|++++|+..+.....    ....   ......+|+.|.+++.++++      
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (280)
T 1xkq_A            5 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF   84 (280)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHhc
Confidence            4478999999999999999999999999999999875543221    1111   12245679999988877765      


Q ss_pred             -CCCEEEEccCCCCCC-------CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccC
Q 017977          116 -GSTAVVNLAGTPIGT-------RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMIT  185 (363)
Q Consensus       116 -~~d~Vi~~a~~~~~~-------~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~  185 (363)
                       ++|+|||+||.....       ....+..+..+++|+.++.++++++.+.  ..+ .++|++||..+..+.      .+
T Consensus        85 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~------~~  157 (280)
T 1xkq_A           85 GKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQA------QP  157 (280)
T ss_dssp             SCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSC------CC
T ss_pred             CCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccCCC------CC
Confidence             689999999974322       2345667889999999999999988752  123 689999998432110      12


Q ss_pred             CCcchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc---cc----hHHHHHHHhCCCCCCCC
Q 017977          186 WLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL---AK----MIPLFMMFAGGPLGSGQ  258 (363)
Q Consensus       186 ~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~---~~----~~~~~~~~~~~~~~~~~  258 (363)
                      ....|..+|.+...+.++      ... .+ ...|+++++++|+.+.++.....   ..    ..........     ..
T Consensus       158 ~~~~Y~asK~a~~~~~~~------la~-e~-~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-----~~  224 (280)
T 1xkq_A          158 DFLYYAIAKAALDQYTRS------TAI-DL-AKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKE-----CI  224 (280)
T ss_dssp             SSHHHHHHHHHHHHHHHH------HHH-HH-HTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTT-----TC
T ss_pred             cccHHHHHHHHHHHHHHH------HHH-Hh-ccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHHc-----CC
Confidence            333455554332222211      011 11 12489999999999998742111   00    0001111111     01


Q ss_pred             CccccccHHHHHHHHHHHhcCC---CCCc-eEEeeCCCC
Q 017977          259 QWFSWIHLDDIVNLIYEALSNP---SYRG-VINGTAPNP  293 (363)
Q Consensus       259 ~~~~~i~v~D~a~a~~~~~~~~---~~~g-~~~i~~~~~  293 (363)
                      ....+.+++|+|++++.++...   ...| .+++.+|..
T Consensus       225 p~~~~~~pedvA~~v~~l~s~~~~~~~tG~~i~vdgG~~  263 (280)
T 1xkq_A          225 PIGAAGKPEHIANIILFLADRNLSFYILGQSIVADGGTS  263 (280)
T ss_dssp             TTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred             CCCCCCCHHHHHHHHHHhcCcccccCccCCeEEECCCcc
Confidence            1224789999999999998654   2344 788877643

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.82  E-value=1.1e-19  Score=158.84  Aligned_cols=224  Identities=16%  Similarity=0.138  Sum_probs=147.6

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCC----CCCccccCcccccCcchHHhhcc-------C
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (363)
                      ..+++++||||+|+||+++++.|+++|++|++++|+.+..+....    .........+|+.|.++++++++       +
T Consensus        30 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~  109 (276)
T 3r1i_A           30 LSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGG  109 (276)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            345799999999999999999999999999999998766443211    11122245689999998887776       7


Q ss_pred             CCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCC-CCCeEEEeccceecCCcccccccCCCcch
Q 017977          117 STAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLELVKPKYLMRAAHQEMITWLSDY  190 (363)
Q Consensus       117 ~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~-~~~~v~~SS~~~~yg~~~~~e~~~~~~~~  190 (363)
                      +|+|||+||.....   ..+.+..+..+++|+.++.++++++.+.  ..+ ..++|++||..+.++.     ..+....|
T Consensus       110 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~-----~~~~~~~Y  184 (276)
T 3r1i_A          110 IDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIIN-----IPQQVSHY  184 (276)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC-----CSSCCHHH
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccC-----CCCCcchH
Confidence            89999999975432   2355667888999999999999887653  112 3569999988432220     01122345


Q ss_pred             hhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHH
Q 017977          191 CAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIV  270 (363)
Q Consensus       191 ~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  270 (363)
                      ..+|.+...+.++       ....+. ..|++++.++||.|.++...........+  ....++      ..+..++|+|
T Consensus       185 ~asKaa~~~l~~~-------la~e~~-~~gIrvn~v~PG~v~T~~~~~~~~~~~~~--~~~~p~------~r~~~pedvA  248 (276)
T 3r1i_A          185 CTSKAAVVHLTKA-------MAVELA-PHQIRVNSVSPGYIRTELVEPLADYHALW--EPKIPL------GRMGRPEELT  248 (276)
T ss_dssp             HHHHHHHHHHHHH-------HHHHHG-GGTEEEEEEEECCBCSTTTGGGGGGHHHH--GGGSTT------SSCBCGGGSH
T ss_pred             HHHHHHHHHHHHH-------HHHHHh-hcCcEEEEEeeCCCcCCccccchHHHHHH--HhcCCC------CCCcCHHHHH
Confidence            5554333222211       111111 23899999999999987543322222211  122222      2377899999


Q ss_pred             HHHHHHhcCCC--CCc-eEEeeCCC
Q 017977          271 NLIYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       271 ~a~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      ++++.++....  ..| ++++.+|.
T Consensus       249 ~~v~fL~s~~~~~itG~~i~vdGG~  273 (276)
T 3r1i_A          249 GLYLYLASAASSYMTGSDIVIDGGY  273 (276)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHHHHcCccccCccCcEEEECcCc
Confidence            99999997543  344 78887764

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.82  E-value=6e-20  Score=159.77  Aligned_cols=223  Identities=17%  Similarity=0.016  Sum_probs=145.3

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCC-----C-CCccccCcccccCcchHHhhcc-------
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP-----G-KKTRFFPGVMIAEEPQWRDCIQ-------  115 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----~-~~~~~~~~~d~~~~~~~~~~~~-------  115 (363)
                      .+++++||||+|+||+++++.|+++|++|++++|+..+.+....     . ........+|+.|.+++.++++       
T Consensus         7 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   86 (265)
T 3lf2_A            7 SEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTLG   86 (265)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            45789999999999999999999999999999998765432211     0 1112244589999888877664       


Q ss_pred             CCCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcch
Q 017977          116 GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDY  190 (363)
Q Consensus       116 ~~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~  190 (363)
                      ++|++||+||.....   ..+.+..+..+++|+.++.++++++.+.  ..+..++|++||..+..+       .+....|
T Consensus        87 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------~~~~~~Y  159 (265)
T 3lf2_A           87 CASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQP-------EPHMVAT  159 (265)
T ss_dssp             SCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSC-------CTTBHHH
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCC-------CCCchhh
Confidence            689999999975332   3456677889999999999999998653  134557999999854322       2333456


Q ss_pred             hhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCc-----------ccchHHHHHHHhCCCCCCCCC
Q 017977          191 CAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA-----------LAKMIPLFMMFAGGPLGSGQQ  259 (363)
Q Consensus       191 ~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~-----------~~~~~~~~~~~~~~~~~~~~~  259 (363)
                      ..+|.+...+.++       ....+. ..|+++..++||.+.++....           ...+..........|+     
T Consensus       160 ~asKaa~~~l~~~-------la~e~~-~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-----  226 (265)
T 3lf2_A          160 SAARAGVKNLVRS-------MAFEFA-PKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPL-----  226 (265)
T ss_dssp             HHHHHHHHHHHHH-------HHHHHG-GGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCTT-----
T ss_pred             HHHHHHHHHHHHH-------HHHHhc-ccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCCc-----
Confidence            5554333222211       111111 238999999999998752110           0011111111111222     


Q ss_pred             ccccccHHHHHHHHHHHhcCCC--CCc-eEEeeCCC
Q 017977          260 WFSWIHLDDIVNLIYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       260 ~~~~i~v~D~a~a~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                       ..+..++|+|++++.++....  ..| .+++.+|.
T Consensus       227 -~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~  261 (265)
T 3lf2_A          227 -GRLGKPIEAARAILFLASPLSAYTTGSHIDVSGGL  261 (265)
T ss_dssp             -CSCBCHHHHHHHHHHHHSGGGTTCCSEEEEESSSC
T ss_pred             -CCCcCHHHHHHHHHHHhCchhcCcCCCEEEECCCC
Confidence             237889999999999997543  345 78887764

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.82  E-value=5.8e-20  Score=161.46  Aligned_cols=220  Identities=16%  Similarity=0.152  Sum_probs=145.1

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCC---EEEEEeCCCCcccccCCC------CCccccCcccccCcchHHhhcc----
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNH---QVRVLTRSRSKAELIFPG------KKTRFFPGVMIAEEPQWRDCIQ----  115 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~~~----  115 (363)
                      .+++++||||+|+||++++++|+++|+   +|++++|+....+.....      ........+|+.|.+++.++++    
T Consensus        32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  111 (287)
T 3rku_A           32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQ  111 (287)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCG
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            347899999999999999999999987   999999987654432111      1122245689999998887765    


Q ss_pred             ---CCCEEEEccCCCCC----CCCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCC
Q 017977          116 ---GSTAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITW  186 (363)
Q Consensus       116 ---~~d~Vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~  186 (363)
                         ++|+|||+||....    .....+..+..+++|+.++.++++++.+.  ..+..++|++||..+..+       .+.
T Consensus       112 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~-------~~~  184 (287)
T 3rku_A          112 EFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDA-------YPT  184 (287)
T ss_dssp             GGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSC-------CTT
T ss_pred             hcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCC-------CCC
Confidence               58999999997431    23356778899999999999999988431  145678999999854322       233


Q ss_pred             CcchhhhhhhcccchhhHHHHHHHHHHHhc-cCCCceEEEEeeceEEeCCCC-cccchHHHH-HHHhCCCCCCCCCcccc
Q 017977          187 LSDYCAKVYCLVSFNRGVLVCREWEGTALK-VNKDVRLALIRIGIVLGKDGG-ALAKMIPLF-MMFAGGPLGSGQQWFSW  263 (363)
Q Consensus       187 ~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~-~~~~~~~~ilRp~~v~g~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~  263 (363)
                      ...|..+|.+...+.+         ....+ ...|++++.++||.|.++... ......... .....         ..+
T Consensus       185 ~~~Y~asKaa~~~l~~---------~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~---------~~p  246 (287)
T 3rku_A          185 GSIYCASKFAVGAFTD---------SLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVYKD---------TTP  246 (287)
T ss_dssp             CHHHHHHHHHHHHHHH---------HHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCHHHHHHHHTT---------SCC
T ss_pred             CchHHHHHHHHHHHHH---------HHHHHhhhcCCEEEEEeCCcCcCccccccccCcHHHHHHhhcc---------cCC
Confidence            3456555433222221         11111 124899999999999876310 000000111 11111         124


Q ss_pred             ccHHHHHHHHHHHhcCCC---CCceEEeeCCCC
Q 017977          264 IHLDDIVNLIYEALSNPS---YRGVINGTAPNP  293 (363)
Q Consensus       264 i~v~D~a~a~~~~~~~~~---~~g~~~i~~~~~  293 (363)
                      +.++|+|++++.++..+.   .+.++.+.+++.
T Consensus       247 ~~pedvA~~v~~l~s~~~~~i~g~~i~v~~g~~  279 (287)
T 3rku_A          247 LMADDVADLIVYATSRKQNTVIADTLIFPTNQA  279 (287)
T ss_dssp             EEHHHHHHHHHHHHTSCTTEEEEEEEEEETTEE
T ss_pred             CCHHHHHHHHHHHhCCCCCeEecceEEeeCCCC
Confidence            589999999999998765   234777777654

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.82  E-value=6.4e-20  Score=159.35  Aligned_cols=204  Identities=15%  Similarity=0.107  Sum_probs=132.2

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccC----CCCCccccCcccccCcchHHhhcc-------C
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (363)
                      ..+++||||||+|+||++++++|+++|++|++++|+..+.....    ..........+|+.|.+++.++++       .
T Consensus        27 l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~  106 (262)
T 3rkr_A           27 LSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGR  106 (262)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            44579999999999999999999999999999999876543321    111122245689999988877664       5


Q ss_pred             CCEEEEccCCCC-C---CCCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcch
Q 017977          117 STAVVNLAGTPI-G---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDY  190 (363)
Q Consensus       117 ~d~Vi~~a~~~~-~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~  190 (363)
                      +|+|||+||... .   .....+..+..+++|+.++.++++++...  ..+..++|++||.++..+       .+....|
T Consensus       107 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-------~~~~~~Y  179 (262)
T 3rkr_A          107 CDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNP-------VADGAAY  179 (262)
T ss_dssp             CSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCC-------CTTCHHH
T ss_pred             CCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCC-------CCCCchH
Confidence            899999999722 1   23455667889999999999998886542  145668999999844222       2233455


Q ss_pred             hhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHH
Q 017977          191 CAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIV  270 (363)
Q Consensus       191 ~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  270 (363)
                      ..+|.+...+.+       .....+. ..|+++++++||.+..+.......               ......++.++|+|
T Consensus       180 ~asKaa~~~l~~-------~la~e~~-~~gi~v~~v~PG~v~t~~~~~~~~---------------~~~~~~~~~p~dvA  236 (262)
T 3rkr_A          180 TASKWGLNGLMT-------SAAEELR-QHQVRVSLVAPGSVRTEFGVGLSA---------------KKSALGAIEPDDIA  236 (262)
T ss_dssp             HHHHHHHHHHHH-------HHHHHHG-GGTCEEEEEEECCC-------------------------------CCCHHHHH
T ss_pred             HHHHHHHHHHHH-------HHHHHhh-hcCcEEEEEecCCCcCCccccccc---------------ccccccCCCHHHHH
Confidence            555432222211       1111111 238999999999987763211100               01122467899999


Q ss_pred             HHHHHHhcCCC
Q 017977          271 NLIYEALSNPS  281 (363)
Q Consensus       271 ~a~~~~~~~~~  281 (363)
                      ++++.++....
T Consensus       237 ~~v~~l~s~~~  247 (262)
T 3rkr_A          237 DVVALLATQAD  247 (262)
T ss_dssp             HHHHHHHTCCT
T ss_pred             HHHHHHhcCcc
Confidence            99999997654

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.82  E-value=4.8e-20  Score=160.79  Aligned_cols=211  Identities=11%  Similarity=0.037  Sum_probs=132.9

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCC-CCccccCcccccCcchHHhhcc-------CCCE
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTA  119 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~d~  119 (363)
                      ..+++++||||+|+||++++++|+++|++|++++|+.+........ ........+|+.|.+++.++++       ++|+
T Consensus        26 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  105 (272)
T 4dyv_A           26 TGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVDV  105 (272)
T ss_dssp             --CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            3457899999999999999999999999999999987654332111 1112245689999988887775       7899


Q ss_pred             EEEccCCCCC----CCCChhhHHHHHHHHHHHHHHHHHHHHhC--CCC--CCCeEEEeccceecCCcccccccCCCcchh
Q 017977          120 VVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEG--VRPSVLELVKPKYLMRAAHQEMITWLSDYC  191 (363)
Q Consensus       120 Vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~--~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~  191 (363)
                      |||+||....    ...+.+..+..+++|+.++.++++++.+.  ..+  ..++|++||..+..+       .+....|.
T Consensus       106 lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~-------~~~~~~Y~  178 (272)
T 4dyv_A          106 LFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSP-------RPYSAPYT  178 (272)
T ss_dssp             EEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSC-------CTTCHHHH
T ss_pred             EEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCC-------CCCchHHH
Confidence            9999997432    13456677889999999988888877653  122  357999999854322       23344566


Q ss_pred             hhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHH
Q 017977          192 AKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVN  271 (363)
Q Consensus       192 ~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  271 (363)
                      .+|.+...+.++       ....+. ..|+++..++||.+..+.......-..  ...      .......+.+++|+|+
T Consensus       179 asKaa~~~l~~~-------la~e~~-~~gI~vn~v~PG~v~T~~~~~~~~~~~--~~~------~~~~~~~~~~pedvA~  242 (272)
T 4dyv_A          179 ATKHAITGLTKS-------TSLDGR-VHDIACGQIDIGNADTPMAQKMKAGVP--QAD------LSIKVEPVMDVAHVAS  242 (272)
T ss_dssp             HHHHHHHHHHHH-------HHHHHG-GGTEEEEEEEEEECC--------------------------------CHHHHHH
T ss_pred             HHHHHHHHHHHH-------HHHHhC-ccCEEEEEEEECcccChhhhhhcccch--hhh------hcccccCCCCHHHHHH
Confidence            665443333221       111111 238999999999998774321110000  000      0111224789999999


Q ss_pred             HHHHHhcCCC
Q 017977          272 LIYEALSNPS  281 (363)
Q Consensus       272 a~~~~~~~~~  281 (363)
                      +++.++..+.
T Consensus       243 ~v~fL~s~~~  252 (272)
T 4dyv_A          243 AVVYMASLPL  252 (272)
T ss_dssp             HHHHHHHSCT
T ss_pred             HHHHHhCCCC
Confidence            9999998766

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.82  E-value=1.5e-19  Score=161.39  Aligned_cols=236  Identities=14%  Similarity=0.048  Sum_probs=138.5

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcc-----cccC----CCCCccccCcccccCcchHHhhcc-----
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-----ELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-----  115 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-----  115 (363)
                      +++|+||||+|+||++++++|+++|++|++++|+....     +.+.    ..........+|+.|.+++.++++     
T Consensus         5 ~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~   84 (324)
T 3u9l_A            5 KKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIGE   84 (324)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999974221     1110    001112245689999998888776     


Q ss_pred             --CCCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCc
Q 017977          116 --GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLS  188 (363)
Q Consensus       116 --~~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~  188 (363)
                        ++|+|||+||.....   ..+.+..+..+++|+.++.++++++...  ..+..++|++||.++..+      ..+...
T Consensus        85 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~------~~~~~~  158 (324)
T 3u9l_A           85 DGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGG------TPPYLA  158 (324)
T ss_dssp             HSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC------CCSSCH
T ss_pred             cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccC------CCCcch
Confidence              799999999974322   2355667889999999999999998321  046678999999843222      012233


Q ss_pred             chhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCc-----ccchHHHHHHHhCCCCCCCCC----
Q 017977          189 DYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA-----LAKMIPLFMMFAGGPLGSGQQ----  259 (363)
Q Consensus       189 ~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~----  259 (363)
                      .|..+|.+...+.++      +..+ + ...|+++++++||.+.++....     ................+.++.    
T Consensus       159 ~Y~asKaa~~~~~~~------la~e-l-~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (324)
T 3u9l_A          159 PYFAAKAAMDAIAVQ------YARE-L-SRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEAGPNAGLGEEIKKA  230 (324)
T ss_dssp             HHHHHHHHHHHHHHH------HHHH-H-HTTTEEEEEEEECCC---------CBCCSCHHHHHHHHHTTTTTHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHH------HHHH-h-hhhCcEEEEEECCccccCchhhcccCCchHHHHHHhhccccccCCHHHHHHH
Confidence            455554332222211      1111 1 1248999999999998653211     000100001000000000000    


Q ss_pred             ----ccccccHHHHHHHHHHHhcCCCC-CceEEeeCCCCcCHHHH
Q 017977          260 ----WFSWIHLDDIVNLIYEALSNPSY-RGVINGTAPNPVRLAEM  299 (363)
Q Consensus       260 ----~~~~i~v~D~a~a~~~~~~~~~~-~g~~~i~~~~~~s~~el  299 (363)
                          ..+..+++|+|++++.++..+.. .....+.++....+..+
T Consensus       231 ~~~l~~~~~~p~~vA~aiv~~~~~~~~~~~~~~~~gp~~~~~~~~  275 (324)
T 3u9l_A          231 FAAIVPPDADVSLVADAIVRVVGTASGKRPFRVHVDPAEDGADVG  275 (324)
T ss_dssp             HHHTSCTTCCTHHHHHHHHHHHTSCTTCCCSEEEECTTCCSHHHH
T ss_pred             HHHhcCCCCCHHHHHHHHHHHhcCCCCCCCeEEEeCCcchHHHHH
Confidence                01125789999999999987742 22333334334453333

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.82  E-value=3.2e-19  Score=154.56  Aligned_cols=227  Identities=14%  Similarity=0.078  Sum_probs=140.6

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCc-cc----ccCCCCCccccCcccccCcchHHhhcc-------
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK-AE----LIFPGKKTRFFPGVMIAEEPQWRDCIQ-------  115 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~----~~~~~~~~~~~~~~d~~~~~~~~~~~~-------  115 (363)
                      ..+++++||||+|+||++++++|+++|++|++++++..+ ..    .+...........+|+.|.+++.++++       
T Consensus         6 l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   85 (259)
T 3edm_A            6 FTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFG   85 (259)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            345799999999999999999999999999999554433 21    111112222355689999988887765       


Q ss_pred             CCCEEEEccCCCCC----CCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchh
Q 017977          116 GSTAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYC  191 (363)
Q Consensus       116 ~~d~Vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~  191 (363)
                      ++|++||+||....    ...+.+..+..+++|+.++.++++++.+......++|++||..+...      ..+....|.
T Consensus        86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~------~~~~~~~Y~  159 (259)
T 3edm_A           86 EIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDG------GGPGALAYA  159 (259)
T ss_dssp             SEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHC------CSTTCHHHH
T ss_pred             CCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccC------CCCCcHHHH
Confidence            68999999986422    23455667889999999999999999883111237999999843211      123334566


Q ss_pred             hhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHH
Q 017977          192 AKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVN  271 (363)
Q Consensus       192 ~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  271 (363)
                      .+|.+...+.+         ....+...++.+..++||.+.++.......  +...    ..+........+.+++|+|+
T Consensus       160 asKaa~~~l~~---------~la~e~~~~I~vn~v~PG~v~T~~~~~~~~--~~~~----~~~~~~~p~~r~~~pedva~  224 (259)
T 3edm_A          160 TSKGAVMTFTR---------GLAKEVGPKIRVNAVCPGMISTTFHDTFTK--PEVR----ERVAGATSLKREGSSEDVAG  224 (259)
T ss_dssp             HHHHHHHHHHH---------HHHHHHTTTCEEEEEEECCBCC----------------------------CCBCHHHHHH
T ss_pred             HHHHHHHHHHH---------HHHHHHCCCCEEEEEEECCCcCcccccccC--hHHH----HHHHhcCCCCCCcCHHHHHH
Confidence            55433332222         111111224999999999998764321110  0000    00111122234778999999


Q ss_pred             HHHHHhcCCC--CCc-eEEeeCCCCcC
Q 017977          272 LIYEALSNPS--YRG-VINGTAPNPVR  295 (363)
Q Consensus       272 a~~~~~~~~~--~~g-~~~i~~~~~~s  295 (363)
                      +++.++....  ..| .+++.++....
T Consensus       225 ~v~~L~s~~~~~itG~~i~vdGg~~~~  251 (259)
T 3edm_A          225 LVAFLASDDAAYVTGACYDINGGVLFS  251 (259)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESBCSSBC
T ss_pred             HHHHHcCccccCccCCEEEECCCcCCC
Confidence            9999987543  344 88888875443

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.82  E-value=1.2e-19  Score=159.52  Aligned_cols=223  Identities=16%  Similarity=0.007  Sum_probs=143.1

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcc-cc----cCCCCCccccCcccccCcchHHhhcc-------C
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-EL----IFPGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~----~~~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (363)
                      .+++++||||+|+||+++++.|+++|++|++++|+..+. +.    +...........+|+.|.+++.++++       +
T Consensus        28 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  107 (283)
T 1g0o_A           28 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGK  107 (283)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            347899999999999999999999999999999987532 11    11111112244579998887776654       6


Q ss_pred             CCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccC-CCcchhh
Q 017977          117 STAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMIT-WLSDYCA  192 (363)
Q Consensus       117 ~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~-~~~~~~~  192 (363)
                      +|+|||+||.....   ....+..+..+++|+.++.++++++.+...+..++|++||..+..+       .+ ....|..
T Consensus       108 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~-------~~~~~~~Y~a  180 (283)
T 1g0o_A          108 LDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAK-------AVPKHAVYSG  180 (283)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCS-------SCSSCHHHHH
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccC-------CCCCCcchHH
Confidence            89999999975332   2356677889999999999999999873124568999999843222       11 1334555


Q ss_pred             hhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc-cch--------HHHH-HHHh--CCCCCCCCCc
Q 017977          193 KVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL-AKM--------IPLF-MMFA--GGPLGSGQQW  260 (363)
Q Consensus       193 ~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~-~~~--------~~~~-~~~~--~~~~~~~~~~  260 (363)
                      +|.+...+.++       ....+. ..|+++++++||.+.++..... ..+        .... ....  ..++      
T Consensus       181 sK~a~~~~~~~-------la~e~~-~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~------  246 (283)
T 1g0o_A          181 SKGAIETFARC-------MAIDMA-DKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPL------  246 (283)
T ss_dssp             HHHHHHHHHHH-------HHHHHG-GGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTT------
T ss_pred             HHHHHHHHHHH-------HHHHhc-ccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCCCC------
Confidence            54332222211       111111 2389999999999987631100 000        0011 1111  2222      


Q ss_pred             cccccHHHHHHHHHHHhcCCC--CCc-eEEeeCCC
Q 017977          261 FSWIHLDDIVNLIYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       261 ~~~i~v~D~a~a~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      ..+.+++|+|++++.++....  ..| .+++.+|.
T Consensus       247 ~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdgG~  281 (283)
T 1g0o_A          247 RRVGLPIDIARVVCFLASNDGGWVTGKVIGIDGGA  281 (283)
T ss_dssp             CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CCCcCHHHHHHHHHHHhCccccCcCCCEEEeCCCc
Confidence            237889999999999997543  344 77777763

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.82  E-value=8.1e-20  Score=161.13  Aligned_cols=225  Identities=9%  Similarity=-0.017  Sum_probs=144.4

Q ss_pred             CCccEEEEecCcch--HHHHHHHHHHhCCCEEEEEeCCCCcccc---cCCCCCccccCcccccCcchHHhhcc-------
Q 017977           48 ASQMTVSVTGATGF--IGRRLVQRLQADNHQVRVLTRSRSKAEL---IFPGKKTRFFPGVMIAEEPQWRDCIQ-------  115 (363)
Q Consensus        48 ~~~~~vlVtGatG~--iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~~~~~~~~~~~~d~~~~~~~~~~~~-------  115 (363)
                      ..+++++||||+|+  ||+++++.|+++|++|++++|+....+.   +...........+|+.|.+++.++++       
T Consensus        29 l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  108 (293)
T 3grk_A           29 LQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKWG  108 (293)
T ss_dssp             TTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcC
Confidence            44578999999988  9999999999999999999998532111   11111112245689999988887765       


Q ss_pred             CCCEEEEccCCCCC-------CCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCc
Q 017977          116 GSTAVVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLS  188 (363)
Q Consensus       116 ~~d~Vi~~a~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~  188 (363)
                      ++|++||+||....       .....+..+..+++|+.++.++++++.+......++|++||.++..+       .+...
T Consensus       109 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~-------~~~~~  181 (293)
T 3grk_A          109 KLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKV-------MPNYN  181 (293)
T ss_dssp             CCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSB-------CTTTT
T ss_pred             CCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccC-------CCchH
Confidence            68999999997531       23456677889999999999999999874122457999999844222       22334


Q ss_pred             chhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHH-HHHhCCCCCCCCCccccccHH
Q 017977          189 DYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLD  267 (363)
Q Consensus       189 ~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~  267 (363)
                      .|..+|.+...+.++       ....+. ..|+++..++||.+.++............ ......++      ..+..++
T Consensus       182 ~Y~asKaa~~~l~~~-------la~e~~-~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------~r~~~pe  247 (293)
T 3grk_A          182 VMGVAKAALEASVKY-------LAVDLG-PQNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPL------RRTVTID  247 (293)
T ss_dssp             HHHHHHHHHHHHHHH-------HHHHHG-GGTEEEEEEEECCCCC------CCHHHHHHHHHHHSTT------SSCCCHH
T ss_pred             HHHHHHHHHHHHHHH-------HHHHHh-HhCCEEEEEecCCCcchhhhcccchHHHHHHHHhcCCC------CCCCCHH
Confidence            565554333322211       111111 23899999999999887432221111111 11122222      2367899


Q ss_pred             HHHHHHHHHhcCCC--CCc-eEEeeCCCC
Q 017977          268 DIVNLIYEALSNPS--YRG-VINGTAPNP  293 (363)
Q Consensus       268 D~a~a~~~~~~~~~--~~g-~~~i~~~~~  293 (363)
                      |+|++++.++....  ..| .+++.+|..
T Consensus       248 dvA~~v~~L~s~~~~~itG~~i~vdGG~~  276 (293)
T 3grk_A          248 EVGDVGLYFLSDLSRSVTGEVHHADSGYH  276 (293)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHHHcCccccCCcceEEEECCCcc
Confidence            99999999997543  344 888887743

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.82  E-value=1.7e-19  Score=157.16  Aligned_cols=224  Identities=8%  Similarity=0.008  Sum_probs=146.2

Q ss_pred             CCccEEEEecCcch--HHHHHHHHHHhCCCEEEEEeCCCCccccc---CCC-CC-ccccCcccccCcchHHhhcc-----
Q 017977           48 ASQMTVSVTGATGF--IGRRLVQRLQADNHQVRVLTRSRSKAELI---FPG-KK-TRFFPGVMIAEEPQWRDCIQ-----  115 (363)
Q Consensus        48 ~~~~~vlVtGatG~--iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~-~~-~~~~~~~d~~~~~~~~~~~~-----  115 (363)
                      ..+++|+||||+|+  ||+++++.|+++|++|++++|+....+..   ... .. ......+|+.|.++++++++     
T Consensus         5 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   84 (266)
T 3oig_A            5 LEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQ   84 (266)
T ss_dssp             CTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHH
T ss_pred             cCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHH
Confidence            34578999999988  99999999999999999999986432211   111 11 12355689999998887765     


Q ss_pred             --CCCEEEEccCCCCC-------CCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCC
Q 017977          116 --GSTAVVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITW  186 (363)
Q Consensus       116 --~~d~Vi~~a~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~  186 (363)
                        .+|+|||+||....       ...+.+.....+++|+.++.++++++........++|++||.++.++       .+.
T Consensus        85 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~-------~~~  157 (266)
T 3oig_A           85 VGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELV-------MPN  157 (266)
T ss_dssp             HSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSC-------CTT
T ss_pred             hCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEeccccccc-------CCC
Confidence              68999999997531       22455667889999999999999999874222347999999854322       233


Q ss_pred             CcchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHH-HHHhCCCCCCCCCcccccc
Q 017977          187 LSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIH  265 (363)
Q Consensus       187 ~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~  265 (363)
                      ...|..+|.+...|.++       ....+. ..|+++++++||.+.++............ ......++      ..+.+
T Consensus       158 ~~~Y~asKaa~~~~~~~-------la~e~~-~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~------~~~~~  223 (266)
T 3oig_A          158 YNVMGVAKASLDASVKY-------LAADLG-KENIRVNSISAGPIRTLSAKGISDFNSILKDIEERAPL------RRTTT  223 (266)
T ss_dssp             THHHHHHHHHHHHHHHH-------HHHHHG-GGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTT------SSCCC
T ss_pred             cchhHHHHHHHHHHHHH-------HHHHHh-hcCcEEEEEecCcccccccccccchHHHHHHHHhcCCC------CCCCC
Confidence            34555554333222211       111111 23899999999999886432221111111 11111222      23678


Q ss_pred             HHHHHHHHHHHhcCCC--CCc-eEEeeCCC
Q 017977          266 LDDIVNLIYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       266 v~D~a~a~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      ++|+|++++.++....  ..| .+++.+|.
T Consensus       224 p~dva~~v~~l~s~~~~~~tG~~i~vdGG~  253 (266)
T 3oig_A          224 PEEVGDTAAFLFSDMSRGITGENLHVDSGF  253 (266)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHHHHcCCchhcCcCCEEEECCCe
Confidence            9999999999997543  344 88888764

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.82  E-value=2.1e-19  Score=156.77  Aligned_cols=224  Identities=16%  Similarity=0.022  Sum_probs=144.9

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcc-cc----cCCCCCccccCcccccCcchHHhhcc-------
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-EL----IFPGKKTRFFPGVMIAEEPQWRDCIQ-------  115 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~----~~~~~~~~~~~~~d~~~~~~~~~~~~-------  115 (363)
                      ..++++|||||+|+||++++++|+++|++|++++++..+. +.    +...........+|+.|.+++.++++       
T Consensus        16 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   95 (270)
T 3is3_A           16 LDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFG   95 (270)
T ss_dssp             CTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            3457899999999999999999999999999988765431 11    11111222245689999988877765       


Q ss_pred             CCCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccc-eecCCcccccccCCCcchh
Q 017977          116 GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKP-KYLMRAAHQEMITWLSDYC  191 (363)
Q Consensus       116 ~~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~-~~yg~~~~~e~~~~~~~~~  191 (363)
                      ++|++||+||.....   ..+.+..+..+++|+.++.++++++.+......++|++||.. ...+       .+....|.
T Consensus        96 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------~~~~~~Y~  168 (270)
T 3is3_A           96 HLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDFS-------VPKHSLYS  168 (270)
T ss_dssp             CCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTTCC-------CTTCHHHH
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhccCC-------CCCCchhH
Confidence            689999999975332   235667788999999999999999987412234799999974 2111       23334566


Q ss_pred             hhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCccc--------ch-HHHH--HHHhCCCCCCCCCc
Q 017977          192 AKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALA--------KM-IPLF--MMFAGGPLGSGQQW  260 (363)
Q Consensus       192 ~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~--------~~-~~~~--~~~~~~~~~~~~~~  260 (363)
                      .+|.+...+.++       ....+. ..|+++..++||.+.++......        .. ....  ......++      
T Consensus       169 asKaa~~~~~~~-------la~e~~-~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~------  234 (270)
T 3is3_A          169 GSKGAVDSFVRI-------FSKDCG-DKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPL------  234 (270)
T ss_dssp             HHHHHHHHHHHH-------HHHHHG-GGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHSTT------
T ss_pred             HHHHHHHHHHHH-------HHHHhc-ccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcCCC------
Confidence            654433333221       111111 23899999999999887421100        00 0111  11112222      


Q ss_pred             cccccHHHHHHHHHHHhcCCC--CCc-eEEeeCCC
Q 017977          261 FSWIHLDDIVNLIYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       261 ~~~i~v~D~a~a~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      ..+.+++|+|++++.++....  ..| .+++.+|.
T Consensus       235 ~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  269 (270)
T 3is3_A          235 HRNGWPQDVANVVGFLVSKEGEWVNGKVLTLDGGA  269 (270)
T ss_dssp             CSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred             CCCCCHHHHHHHHHHHcCCccCCccCcEEEeCCCC
Confidence            236789999999999986543  345 78877763

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.82  E-value=3.4e-19  Score=155.35  Aligned_cols=223  Identities=15%  Similarity=0.050  Sum_probs=146.2

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCc-ccc----cCCCCCccccCcccccCcchHHhhcc-------
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK-AEL----IFPGKKTRFFPGVMIAEEPQWRDCIQ-------  115 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~----~~~~~~~~~~~~~d~~~~~~~~~~~~-------  115 (363)
                      ..+++++||||+|+||++++++|+++|++|++++++..+ .+.    +...........+|+.|.++++++++       
T Consensus        29 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  108 (271)
T 3v2g_A           29 LAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALG  108 (271)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            345789999999999999999999999999999776533 111    11111222245689999988887765       


Q ss_pred             CCCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhh
Q 017977          116 GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCA  192 (363)
Q Consensus       116 ~~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~  192 (363)
                      ++|+|||+||.....   ..+.+..+..+++|+.++.++++++.+......++|++||..+.++      ..+....|..
T Consensus       109 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~------~~~~~~~Y~a  182 (271)
T 3v2g_A          109 GLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELV------PWPGISLYSA  182 (271)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCC------CSTTCHHHHH
T ss_pred             CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccC------CCCCchHHHH
Confidence            789999999975332   2356677889999999999999999874223467999998633211      0123345555


Q ss_pred             hhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHH
Q 017977          193 KVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL  272 (363)
Q Consensus       193 ~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a  272 (363)
                      +|.+...+.++       ....+. ..|+++..++||.+.++............  ....++      ..+..++|+|++
T Consensus       183 sKaa~~~l~~~-------la~e~~-~~gIrvn~v~PG~v~T~~~~~~~~~~~~~--~~~~~~------~r~~~pedvA~~  246 (271)
T 3v2g_A          183 SKAALAGLTKG-------LARDLG-PRGITVNIVHPGSTDTDMNPADGDHAEAQ--RERIAT------GSYGEPQDIAGL  246 (271)
T ss_dssp             HHHHHHHHHHH-------HHHHHG-GGTCEEEEEEECSBCSSSSCSSCSSHHHH--HHTCTT------SSCBCHHHHHHH
T ss_pred             HHHHHHHHHHH-------HHHHhh-hhCeEEEEEecCCCcCCcccccchhHHHH--HhcCCC------CCCCCHHHHHHH
Confidence            54332222211       111111 23899999999999987543222222211  122222      236789999999


Q ss_pred             HHHHhcCCC--CCc-eEEeeCCC
Q 017977          273 IYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       273 ~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      ++.++....  ..| ++++.+|.
T Consensus       247 v~fL~s~~~~~itG~~i~vdGG~  269 (271)
T 3v2g_A          247 VAWLAGPQGKFVTGASLTIDGGA  269 (271)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHHhCcccCCccCCEEEeCcCc
Confidence            999986443  344 78887763

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.82  E-value=5.6e-20  Score=159.01  Aligned_cols=214  Identities=13%  Similarity=0.017  Sum_probs=137.4

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCE-EEEEeCCCCc--ccccCCC--CCccccCcccccCc-chHHhhcc-------
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQ-VRVLTRSRSK--AELIFPG--KKTRFFPGVMIAEE-PQWRDCIQ-------  115 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~--~~~~~~~--~~~~~~~~~d~~~~-~~~~~~~~-------  115 (363)
                      .+++|+||||+|+||++++++|+++|++ |++++|+...  ...+...  ........+|+.|. +++.++++       
T Consensus         4 ~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   83 (254)
T 1sby_A            4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK   83 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhcC
Confidence            3478999999999999999999999996 9999998742  1111110  11122445799988 77776664       


Q ss_pred             CCCEEEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhC-C-CC---CCCeEEEeccceecCCcccccccCCCcch
Q 017977          116 GSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES-P-EG---VRPSVLELVKPKYLMRAAHQEMITWLSDY  190 (363)
Q Consensus       116 ~~d~Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~~---~~~~v~~SS~~~~yg~~~~~e~~~~~~~~  190 (363)
                      ++|+|||+||..     ..+..+..+++|+.++.++++++.+. . .+   ..++|++||.++..+       .+....|
T Consensus        84 ~id~lv~~Ag~~-----~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------~~~~~~Y  151 (254)
T 1sby_A           84 TVDILINGAGIL-----DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNA-------IHQVPVY  151 (254)
T ss_dssp             CCCEEEECCCCC-----CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC-------CTTSHHH
T ss_pred             CCCEEEECCccC-----CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccC-------CCCchHH
Confidence            789999999963     34457889999999999999998753 1 11   346999999843211       2223355


Q ss_pred             hhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccch---HHHH-HHHhCCCCCCCCCccccccH
Q 017977          191 CAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKM---IPLF-MMFAGGPLGSGQQWFSWIHL  266 (363)
Q Consensus       191 ~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~i~v  266 (363)
                      ..+|.+...+.++      +.. .+. ..|+++++++||.+.++.......+   .... .....         ..+.++
T Consensus       152 ~~sK~a~~~~~~~------la~-~~~-~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~  214 (254)
T 1sby_A          152 SASKAAVVSFTNS------LAK-LAP-ITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLS---------HPTQTS  214 (254)
T ss_dssp             HHHHHHHHHHHHH------HHH-HHH-HHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTT---------SCCEEH
T ss_pred             HHHHHHHHHHHHH------HHH-Hhc-cCCeEEEEEecCCccCccccccchhhhhhHHHHHHHhc---------CCCCCH
Confidence            5554333222211      000 111 1389999999999988632111000   0001 11111         124589


Q ss_pred             HHHHHHHHHHhcCCCCCceEEeeCC
Q 017977          267 DDIVNLIYEALSNPSYRGVINGTAP  291 (363)
Q Consensus       267 ~D~a~a~~~~~~~~~~~g~~~i~~~  291 (363)
                      +|+|++++.+++....+..|++.+|
T Consensus       215 ~dvA~~i~~~~~~~~~G~~~~v~gG  239 (254)
T 1sby_A          215 EQCGQNFVKAIEANKNGAIWKLDLG  239 (254)
T ss_dssp             HHHHHHHHHHHHHCCTTCEEEEETT
T ss_pred             HHHHHHHHHHHHcCCCCCEEEEeCC
Confidence            9999999999875444558888887

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.82  E-value=3.1e-19  Score=155.51  Aligned_cols=213  Identities=12%  Similarity=0.044  Sum_probs=141.2

Q ss_pred             CCCccEEEEecCcchHHHHHHHHHHhCC---CEEEEEeCCCCcccccCC---CCCccccCcccccCcchHHhhcc-----
Q 017977           47 KASQMTVSVTGATGFIGRRLVQRLQADN---HQVRVLTRSRSKAELIFP---GKKTRFFPGVMIAEEPQWRDCIQ-----  115 (363)
Q Consensus        47 ~~~~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~-----  115 (363)
                      ...+++|+||||+|+||++++++|+++|   ++|++++|+......+..   ......+..+|+.|.+++.++++     
T Consensus        18 ~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   97 (267)
T 1sny_A           18 GSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGV   97 (267)
T ss_dssp             --CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHHHh
Confidence            3455799999999999999999999999   999999998765432211   01112245689999998888776     


Q ss_pred             ----CCCEEEEccCCCC-C---CCCChhhHHHHHHHHHHHHHHHHHHHHhC-C-C------C-----CCCeEEEecccee
Q 017977          116 ----GSTAVVNLAGTPI-G---TRWSSEIKKEIKESRIRVTSKVVDLINES-P-E------G-----VRPSVLELVKPKY  174 (363)
Q Consensus       116 ----~~d~Vi~~a~~~~-~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~------~-----~~~~v~~SS~~~~  174 (363)
                          ++|+|||+||... .   .....+..+..+++|+.++.++++++.+. . .      +     ..++|++||..+.
T Consensus        98 ~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~  177 (267)
T 1sny_A           98 TKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGS  177 (267)
T ss_dssp             HGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGC
T ss_pred             cCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEeccccc
Confidence                7999999999753 1   22345667889999999999999988652 0 1      1     4679999998432


Q ss_pred             cCCcccccccCCCcchhhhhhhcccchhhHHHHHHHHHHHhc--cCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCC
Q 017977          175 LMRAAHQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALK--VNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGG  252 (363)
Q Consensus       175 yg~~~~~e~~~~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~--~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~  252 (363)
                      .+..    ..++...|..+          |.....+......  ...+++++++||+.+..+....              
T Consensus       178 ~~~~----~~~~~~~Y~~s----------K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~--------------  229 (267)
T 1sny_A          178 IQGN----TDGGMYAYRTS----------KSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS--------------  229 (267)
T ss_dssp             STTC----CSCCCHHHHHH----------HHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT--------------
T ss_pred             ccCC----CCCCchHHHHH----------HHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC--------------
Confidence            2210    01122334444          3222222221111  1238999999999987653211              


Q ss_pred             CCCCCCCccccccHHHHHHHHHHHhcCCC--CCceEEeeCCCCcC
Q 017977          253 PLGSGQQWFSWIHLDDIVNLIYEALSNPS--YRGVINGTAPNPVR  295 (363)
Q Consensus       253 ~~~~~~~~~~~i~v~D~a~a~~~~~~~~~--~~g~~~i~~~~~~s  295 (363)
                              ..++..+|+|+.++.++....  ..|.|...++..+.
T Consensus       230 --------~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g~~~~  266 (267)
T 1sny_A          230 --------SAPLDVPTSTGQIVQTISKLGEKQNGGFVNYDGTPLA  266 (267)
T ss_dssp             --------TCSBCHHHHHHHHHHHHHHCCGGGTTCEECTTSCBCC
T ss_pred             --------CCCCCHHHHHHHHHHHHHhcCcCCCCcEEccCCcCcC
Confidence                    125789999999999997543  45655554544444

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.82  E-value=1.6e-19  Score=158.41  Aligned_cols=212  Identities=16%  Similarity=0.092  Sum_probs=133.3

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCC----C--CCccccCcccccCcchHHhhcc-------
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----G--KKTRFFPGVMIAEEPQWRDCIQ-------  115 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~--~~~~~~~~~d~~~~~~~~~~~~-------  115 (363)
                      .+++||||||+|+||+++++.|+++|++|++++|+..+.+....    .  ........+|+.|.+++.++++       
T Consensus        31 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  110 (279)
T 1xg5_A           31 RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHS  110 (279)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence            45689999999999999999999999999999998754332211    0  0111234579999988877765       


Q ss_pred             CCCEEEEccCCCCCC---CCChhhHHHHHHHHHHH----HHHHHHHHHhCCCCC--CCeEEEeccceecCCcccccccCC
Q 017977          116 GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRV----TSKVVDLINESPEGV--RPSVLELVKPKYLMRAAHQEMITW  186 (363)
Q Consensus       116 ~~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~----~~~l~~~~~~~~~~~--~~~v~~SS~~~~yg~~~~~e~~~~  186 (363)
                      ++|+|||+||.....   ....+..+..+++|+.+    ++.+++.+.+  .+.  .++|++||. ..+..    ...+.
T Consensus       111 ~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~--~~~~~g~iv~isS~-~~~~~----~~~~~  183 (279)
T 1xg5_A          111 GVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKE--RNVDDGHIININSM-SGHRV----LPLSV  183 (279)
T ss_dssp             CCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--TTCCSCEEEEECCG-GGTSC----CSCGG
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--cCCCCceEEEEcCh-hhccc----CCCCC
Confidence            789999999974332   23456678899999999    6777777777  554  689999998 33320    01112


Q ss_pred             CcchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCC-cccchHHHHHHHhCCCCCCCCCcccccc
Q 017977          187 LSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGG-ALAKMIPLFMMFAGGPLGSGQQWFSWIH  265 (363)
Q Consensus       187 ~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~  265 (363)
                      ...|..+|.+...+.+      .+..+......++++++++|+.+.++... .............        ....+++
T Consensus       184 ~~~Y~~sK~a~~~~~~------~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~--------~~~~~~~  249 (279)
T 1xg5_A          184 THFYSATKYAVTALTE------GLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATY--------EQMKCLK  249 (279)
T ss_dssp             GHHHHHHHHHHHHHHH------HHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHHHH--------C---CBC
T ss_pred             CchhHHHHHHHHHHHH------HHHHHHhhcCCCeEEEEEecCcccchhhhhhcccChhHHhhhc--------ccccCCC
Confidence            2234444322221111      11111111134899999999999876310 0000000010000        1123789


Q ss_pred             HHHHHHHHHHHhcCCC
Q 017977          266 LDDIVNLIYEALSNPS  281 (363)
Q Consensus       266 v~D~a~a~~~~~~~~~  281 (363)
                      ++|+|++++.++..+.
T Consensus       250 ~~dvA~~i~~l~~~~~  265 (279)
T 1xg5_A          250 PEDVAEAVIYVLSTPA  265 (279)
T ss_dssp             HHHHHHHHHHHHHSCT
T ss_pred             HHHHHHHHHHHhcCCc
Confidence            9999999999998765

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.81  E-value=1.8e-19  Score=161.38  Aligned_cols=222  Identities=13%  Similarity=0.060  Sum_probs=142.4

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEe-CCCCcccccCC-----CCCccccCcccccCcc-------------
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLT-RSRSKAELIFP-----GKKTRFFPGVMIAEEP-------------  108 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~-----~~~~~~~~~~d~~~~~-------------  108 (363)
                      ..+++||||||+|+||+++++.|+++|++|++++ |+.........     .........+|+.|.+             
T Consensus        44 l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~  123 (328)
T 2qhx_A           44 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPV  123 (328)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CCB
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhcccccccccccc
Confidence            3457899999999999999999999999999999 87654332111     1111224568999988             


Q ss_pred             ----hHHhhcc-------CCCEEEEccCCCCCCC---CC--------------hhhHHHHHHHHHHHHHHHHHHHHhC--
Q 017977          109 ----QWRDCIQ-------GSTAVVNLAGTPIGTR---WS--------------SEIKKEIKESRIRVTSKVVDLINES--  158 (363)
Q Consensus       109 ----~~~~~~~-------~~d~Vi~~a~~~~~~~---~~--------------~~~~~~~~~~n~~~~~~l~~~~~~~--  158 (363)
                          ++.++++       ++|+|||+||......   ..              .+..+..+++|+.++.++++++.+.  
T Consensus       124 ~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~  203 (328)
T 2qhx_A          124 TLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVA  203 (328)
T ss_dssp             CHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                7877665       7899999999753322   22              4556778999999999998887642  


Q ss_pred             CCC------CCCeEEEeccceecCCcccccccCCCcchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEE
Q 017977          159 PEG------VRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVL  232 (363)
Q Consensus       159 ~~~------~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~  232 (363)
                      ..+      ..++|++||..+..+       .+....|..+|.+...+.++       ....+. ..|+.+++++||.+.
T Consensus       204 ~~~~~~~~~~g~IV~isS~~~~~~-------~~~~~~Y~asKaal~~l~~~-------la~el~-~~gIrvn~v~PG~v~  268 (328)
T 2qhx_A          204 GTPAKHRGTNYSIINMVDAMTNQP-------LLGYTIYTMAKGALEGLTRS-------AALELA-PLQIRVNGVGPGLSV  268 (328)
T ss_dssp             HSCGGGSCSCEEEEEECCTTTTSC-------CTTCHHHHHHHHHHHHHHHH-------HHHHHG-GGTEEEEEEEESSBS
T ss_pred             hcCCcCCCCCcEEEEECchhhccC-------CCCcHHHHHHHHHHHHHHHH-------HHHHHh-hcCcEEEEEecCccc
Confidence            123      567999999843221       22334555554332222211       111111 238999999999998


Q ss_pred             eCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHHHHHhcCCC--CCc-eEEeeCCC
Q 017977          233 GKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       233 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      ++. ........  ......+++     ..+..++|+|++++.++....  ..| .+++.+|.
T Consensus       269 T~~-~~~~~~~~--~~~~~~p~~-----~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~  323 (328)
T 2qhx_A          269 LVD-DMPPAVWE--GHRSKVPLY-----QRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGY  323 (328)
T ss_dssp             CCC-CSCHHHHH--HHHTTCTTT-----TSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             CCc-cccHHHHH--HHHhhCCCC-----CCCCCHHHHHHHHHHHhCccccCccCcEEEECCCc
Confidence            876 22211111  112222221     036789999999999996432  345 77777764

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.81  E-value=2.5e-19  Score=152.97  Aligned_cols=201  Identities=18%  Similarity=0.082  Sum_probs=133.1

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCC-CCccccCcccccCcchHHhhcc-------CCCEEE
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV  121 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~d~Vi  121 (363)
                      +++|+||||+|+||++++++|+++|++|++++|+..+.+..... ........+|+.|.+++.++++       .+|+||
T Consensus         3 ~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv   82 (235)
T 3l6e_A            3 LGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPELVL   82 (235)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcEEE
Confidence            46899999999999999999999999999999987654332111 0012245689999988877665       679999


Q ss_pred             EccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC-CCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhc
Q 017977          122 NLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCL  197 (363)
Q Consensus       122 ~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~  197 (363)
                      |+||.....   ..+.+..+..+++|+.++.++++++.+. .....++|++||..+.++       .+....|..+|.+.
T Consensus        83 nnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~-------~~~~~~Y~asKaa~  155 (235)
T 3l6e_A           83 HCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQVG-------KANESLYCASKWGM  155 (235)
T ss_dssp             EECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCSS-------CSSHHHHHHHHHHH
T ss_pred             ECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcCC-------CCCCcHHHHHHHHH
Confidence            999974332   3456778889999999999998888653 122237999999854333       22223455554332


Q ss_pred             ccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHHHHHh
Q 017977          198 VSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEAL  277 (363)
Q Consensus       198 ~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~  277 (363)
                      ..+.++       ....+. ..|+++..++||.+..+.......          .      ....+..++|+|++++.++
T Consensus       156 ~~~~~~-------la~e~~-~~gi~v~~v~PG~v~T~~~~~~~~----------~------~~~~~~~pedvA~~v~~l~  211 (235)
T 3l6e_A          156 RGFLES-------LRAELK-DSPLRLVNLYPSGIRSEFWDNTDH----------V------DPSGFMTPEDAAAYMLDAL  211 (235)
T ss_dssp             HHHHHH-------HHHHTT-TSSEEEEEEEEEEECCCC---------------------------CBCHHHHHHHHHHHT
T ss_pred             HHHHHH-------HHHHhh-ccCCEEEEEeCCCccCcchhccCC----------C------CCcCCCCHHHHHHHHHHHH
Confidence            222211       111111 238999999999997663211100          0      0114789999999999999


Q ss_pred             cCCC
Q 017977          278 SNPS  281 (363)
Q Consensus       278 ~~~~  281 (363)
                      +.+.
T Consensus       212 ~~~~  215 (235)
T 3l6e_A          212 EARS  215 (235)
T ss_dssp             CCCS
T ss_pred             hCCC
Confidence            8665

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.81  E-value=1.7e-19  Score=156.14  Aligned_cols=223  Identities=15%  Similarity=0.064  Sum_probs=142.4

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEe-CCCCccccc----CCCCCccccCcccccCcchHHhhcc-------
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLT-RSRSKAELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------  115 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-------  115 (363)
                      ...++||||||+|+||++++++|+++|++|++++ |+.......    ...........+|+.|.+++.++++       
T Consensus        11 ~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   90 (256)
T 3ezl_A           11 MSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEVG   90 (256)
T ss_dssp             --CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhcC
Confidence            4457999999999999999999999999999988 444432221    1111112244689999888877765       


Q ss_pred             CCCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcch
Q 017977          116 GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDY  190 (363)
Q Consensus       116 ~~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~  190 (363)
                      ++|+|||+||.....   ..+.+..+..+++|+.++.++++++.+.  ..+..++|++||..+.++       .+....|
T Consensus        91 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-------~~~~~~Y  163 (256)
T 3ezl_A           91 EIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKG-------QFGQTNY  163 (256)
T ss_dssp             CEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGS-------CSCCHHH
T ss_pred             CCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccC-------CCCCccc
Confidence            689999999975432   2355677889999999988887776431  145567999999854332       2333456


Q ss_pred             hhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCc-ccchHHHHHHHhCCCCCCCCCccccccHHHH
Q 017977          191 CAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA-LAKMIPLFMMFAGGPLGSGQQWFSWIHLDDI  269 (363)
Q Consensus       191 ~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  269 (363)
                      ..+|.+...+.+      . ....+. ..|+++.+++||.+.++.... ......  ......++      ..+.+++|+
T Consensus       164 ~asK~a~~~~~~------~-la~e~~-~~gi~v~~v~PG~v~t~~~~~~~~~~~~--~~~~~~~~------~~~~~~~dv  227 (256)
T 3ezl_A          164 STAKAGIHGFTM------S-LAQEVA-TKGVTVNTVSPGYIGTDMVKAIRPDVLE--KIVATIPV------RRLGSPDEI  227 (256)
T ss_dssp             HHHHHHHHHHHH------H-HHHHHG-GGTEEEEEEEECSBCCHHHHTSCHHHHH--HHHHHSTT------SSCBCHHHH
T ss_pred             HHHHHHHHHHHH------H-HHHHHH-HhCCEEEEEEECcccCccccccCHHHHH--HHHhcCCC------CCCcCHHHH
Confidence            555433222221      1 111111 238999999999998763211 111111  11122222      237789999


Q ss_pred             HHHHHHHhcCCC--CCc-eEEeeCCCC
Q 017977          270 VNLIYEALSNPS--YRG-VINGTAPNP  293 (363)
Q Consensus       270 a~a~~~~~~~~~--~~g-~~~i~~~~~  293 (363)
                      |++++.++....  ..| .+++.+|..
T Consensus       228 a~~~~~l~s~~~~~~tG~~i~vdgG~~  254 (256)
T 3ezl_A          228 GSIVAWLASEESGFSTGADFSLNGGLH  254 (256)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTSC
T ss_pred             HHHHHHHhCCcccCCcCcEEEECCCEe
Confidence            999999986543  344 888887753

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.81  E-value=1.6e-19  Score=158.60  Aligned_cols=226  Identities=16%  Similarity=0.093  Sum_probs=146.9

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCC-CCccccCcccccCcchHHhhcc------CCCEE
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ------GSTAV  120 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~------~~d~V  120 (363)
                      ..+++|+||||+|+||++++++|+++|++|++++|+..+....... .....+..+|+.|.+++.++++      ++|+|
T Consensus        28 l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~l  107 (281)
T 3ppi_A           28 FEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLRYA  107 (281)
T ss_dssp             GTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEEEE
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCeE
Confidence            3456899999999999999999999999999999987654432211 1112255689999988887765      57999


Q ss_pred             EEc-cCCCCCC--------CCChhhHHHHHHHHHHHHHHHHHHHHhC--C------CCCCCeEEEeccceecCCcccccc
Q 017977          121 VNL-AGTPIGT--------RWSSEIKKEIKESRIRVTSKVVDLINES--P------EGVRPSVLELVKPKYLMRAAHQEM  183 (363)
Q Consensus       121 i~~-a~~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~------~~~~~~v~~SS~~~~yg~~~~~e~  183 (363)
                      ||+ |+.....        ....+..+..+++|+.++.++++++...  .      .+..++|++||..+..+       
T Consensus       108 v~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------  180 (281)
T 3ppi_A          108 VVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEG-------  180 (281)
T ss_dssp             EECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSC-------
T ss_pred             EEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCC-------
Confidence            999 4432221        2345567889999999999999988742  1      23447999999854222       


Q ss_pred             cCCCcchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc-cchHHHHHHHhCCCCCCCCCccc
Q 017977          184 ITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAGGPLGSGQQWFS  262 (363)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  262 (363)
                      .+....|..+|.+...+.+      .+.. .+.. .|+.+++++||.+..+..... .....  ......++     ...
T Consensus       181 ~~~~~~Y~asKaa~~~~~~------~la~-e~~~-~gi~v~~v~PG~v~T~~~~~~~~~~~~--~~~~~~~~-----~~~  245 (281)
T 3ppi_A          181 QIGQTAYAAAKAGVIGLTI------AAAR-DLSS-AGIRVNTIAPGTMKTPIMESVGEEALA--KFAANIPF-----PKR  245 (281)
T ss_dssp             CTTCHHHHHHHHHHHHHHH------HHHH-HHGG-GTEEEEEEEECSBCCHHHHTTCHHHHH--HHHHTCCS-----SSS
T ss_pred             CCCCcccHHHHHHHHHHHH------HHHH-HHhh-cCeEEEEEecCcCCchhhhcccHHHHH--HHHhcCCC-----CCC
Confidence            2233455555433322221      1111 1111 389999999999976521111 11111  12222222     134


Q ss_pred             cccHHHHHHHHHHHhcCCCCCc-eEEeeCCCCcC
Q 017977          263 WIHLDDIVNLIYEALSNPSYRG-VINGTAPNPVR  295 (363)
Q Consensus       263 ~i~v~D~a~a~~~~~~~~~~~g-~~~i~~~~~~s  295 (363)
                      +.+++|+|++++.++......| ++++.+|..++
T Consensus       246 ~~~pedvA~~v~~l~s~~~~tG~~i~vdGG~~~~  279 (281)
T 3ppi_A          246 LGTPDEFADAAAFLLTNGYINGEVMRLDGAQRFT  279 (281)
T ss_dssp             CBCHHHHHHHHHHHHHCSSCCSCEEEESTTCCCC
T ss_pred             CCCHHHHHHHHHHHHcCCCcCCcEEEECCCcccC
Confidence            7899999999999998755555 88888876553

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.81  E-value=2.9e-19  Score=156.79  Aligned_cols=218  Identities=14%  Similarity=0.056  Sum_probs=140.4

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCC----CCccccCcccccCcchHHhhcc-------CC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG----KKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (363)
                      .+++|+||||+|+||++++++|+++|++|++++|+..........    ........+|+.|.+++.++++       .+
T Consensus        33 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i  112 (279)
T 3ctm_A           33 KGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGTI  112 (279)
T ss_dssp             TTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            446899999999999999999999999999999987654322110    1112244679999888887765       48


Q ss_pred             CEEEEccCCCCC-C----CCChhhHHHHHHHHHHH----HHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCc
Q 017977          118 TAVVNLAGTPIG-T----RWSSEIKKEIKESRIRV----TSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLS  188 (363)
Q Consensus       118 d~Vi~~a~~~~~-~----~~~~~~~~~~~~~n~~~----~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~  188 (363)
                      |+|||+||.... .    ....+..+..+++|+.+    ++++++.+.+  .+.+++|++||.++..+     ...+...
T Consensus       113 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~~~~~iv~isS~~~~~~-----~~~~~~~  185 (279)
T 3ctm_A          113 DVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKK--NGKGSLIITSSISGKIV-----NIPQLQA  185 (279)
T ss_dssp             SEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCCEEEEECCCTTSCC--------CCHH
T ss_pred             CEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--cCCCeEEEECchHhccC-----CCCCCcc
Confidence            999999996432 1    23345567789999999    5677777776  56788999999843211     0011222


Q ss_pred             chhhhhhhcccchhhHHHHHHHHHHHhcc--CCCceEEEEeeceEEeCCCCcc-cchHHHHHHHhCCCCCCCCCcccccc
Q 017977          189 DYCAKVYCLVSFNRGVLVCREWEGTALKV--NKDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAGGPLGSGQQWFSWIH  265 (363)
Q Consensus       189 ~~~~~~~~~~~y~~~k~~~~~~~~~~~~~--~~~~~~~ilRp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~  265 (363)
                      .|..          +|.............  ..+ ++++++|+.+.++..... ......+  ....+.      ..+++
T Consensus       186 ~Y~~----------sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~~~~~~~~~--~~~~p~------~~~~~  246 (279)
T 3ctm_A          186 PYNT----------AKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFASKDMKAKW--WQLTPL------GREGL  246 (279)
T ss_dssp             HHHH----------HHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSCCHHHHHHH--HHHSTT------CSCBC
T ss_pred             cHHH----------HHHHHHHHHHHHHHHhcccC-CEEEEeccCCccccccccChHHHHHH--HHhCCc------cCCcC
Confidence            3444          443333332222111  237 999999999988753221 1111111  111122      23789


Q ss_pred             HHHHHHHHHHHhcCCC--CCc-eEEeeCCC
Q 017977          266 LDDIVNLIYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       266 v~D~a~a~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      ++|+|++++.++....  ..| .+++.+|.
T Consensus       247 ~~dvA~~~~~l~s~~~~~~tG~~i~vdgG~  276 (279)
T 3ctm_A          247 TQELVGGYLYLASNASTFTTGSDVVIDGGY  276 (279)
T ss_dssp             GGGTHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHHHHHHHhCccccCccCCEEEECCCe
Confidence            9999999999997532  344 88888774

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.81  E-value=1.2e-19  Score=156.77  Aligned_cols=219  Identities=13%  Similarity=0.077  Sum_probs=140.2

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCC-----CCccccCcccc--cCcchHHhhcc-----
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KKTRFFPGVMI--AEEPQWRDCIQ-----  115 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~d~--~~~~~~~~~~~-----  115 (363)
                      ..+++|+||||+|+||+++++.|+++|++|++++|+.+........     ........+|+  .|.+++.++++     
T Consensus        10 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (252)
T 3f1l_A           10 LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVN   89 (252)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHh
Confidence            3457999999999999999999999999999999987654332110     00112445788  77777766654     


Q ss_pred             --CCCEEEEccCCCCC----CCCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCC
Q 017977          116 --GSTAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWL  187 (363)
Q Consensus       116 --~~d~Vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~  187 (363)
                        ++|+|||+||....    ...+.+..+..+++|+.++.++++++.+.  ..+..++|++||..+.++       .+..
T Consensus        90 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~-------~~~~  162 (252)
T 3f1l_A           90 YPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQG-------RANW  162 (252)
T ss_dssp             CSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSC-------CTTC
T ss_pred             CCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccC-------CCCC
Confidence              68999999997322    23455667889999999999999988432  145678999999854332       2233


Q ss_pred             cchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHH
Q 017977          188 SDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLD  267 (363)
Q Consensus       188 ~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  267 (363)
                      ..|..+|.+...+.+         ....+....+.+..++||.+..+.       ...  ...      ......+..++
T Consensus       163 ~~Y~asK~a~~~l~~---------~la~e~~~~irvn~v~PG~v~t~~-------~~~--~~~------~~~~~~~~~p~  218 (252)
T 3f1l_A          163 GAYAASKFATEGMMQ---------VLADEYQQRLRVNCINPGGTRTAM-------RAS--AFP------TEDPQKLKTPA  218 (252)
T ss_dssp             HHHHHHHHHHHHHHH---------HHHHHTTTTCEEEEEECCSBSSHH-------HHH--HCT------TCCGGGSBCTG
T ss_pred             chhHHHHHHHHHHHH---------HHHHHhcCCcEEEEEecCcccCch-------hhh--hCC------ccchhccCCHH
Confidence            455555433222221         111111124999999999886531       110  001      11123467899


Q ss_pred             HHHHHHHHHhcCCC--CCc-eEEeeCCCCcCHH
Q 017977          268 DIVNLIYEALSNPS--YRG-VINGTAPNPVRLA  297 (363)
Q Consensus       268 D~a~a~~~~~~~~~--~~g-~~~i~~~~~~s~~  297 (363)
                      |+|++++.++....  ..| .+++.+|...++.
T Consensus       219 dva~~~~~L~s~~~~~itG~~i~vdgG~~~~~~  251 (252)
T 3f1l_A          219 DIMPLYLWLMGDDSRRKTGMTFDAQPGRKPGIS  251 (252)
T ss_dssp             GGHHHHHHHHSGGGTTCCSCEEESSCC------
T ss_pred             HHHHHHHHHcCccccCCCCCEEEeCCCcCCCCC
Confidence            99999999987643  344 8888888765543

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.81  E-value=2.7e-19  Score=152.38  Aligned_cols=202  Identities=17%  Similarity=0.142  Sum_probs=130.9

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCC-CCccccCcccccCcchHHhhccCC----CEEEEcc
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQGS----TAVVNLA  124 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~----d~Vi~~a  124 (363)
                      |++|+||||+|+||++++++|+++|++|++++|+.+..+..... .....+..+|+.+.+++.++++.+    |+|||+|
T Consensus         1 Mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~~A   80 (230)
T 3guy_A            1 MSLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSIPSTVVHSA   80 (230)
T ss_dssp             --CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSSCCSEEEECC
T ss_pred             CCEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhhcCCEEEEeC
Confidence            46799999999999999999999999999999988665433221 112224568999999998887654    8999999


Q ss_pred             CCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC-CCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhcccc
Q 017977          125 GTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVSF  200 (363)
Q Consensus       125 ~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~~y  200 (363)
                      |.....   ..+.+..+..+++|+.++.++++++.+. .....++|++||..+..+       .+....|..+|.+...+
T Consensus        81 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~-------~~~~~~Y~asKaa~~~~  153 (230)
T 3guy_A           81 GSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQP-------KAQESTYCAVKWAVKGL  153 (230)
T ss_dssp             CCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSC-------CTTCHHHHHHHHHHHHH
T ss_pred             CcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCC-------CCCCchhHHHHHHHHHH
Confidence            975332   2355667889999999999999988764 222337999999843222       22334555554332222


Q ss_pred             hhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHHHHHhcCC
Q 017977          201 NRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNP  280 (363)
Q Consensus       201 ~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~  280 (363)
                      .+       .....+. ..|+++..++||.+..+.......               ......+.+++|+|++++.++..+
T Consensus       154 ~~-------~la~e~~-~~gi~v~~v~PG~v~t~~~~~~~~---------------~~~~~~~~~~~dvA~~i~~l~~~~  210 (230)
T 3guy_A          154 IE-------SVRLELK-GKPMKIIAVYPGGMATEFWETSGK---------------SLDTSSFMSAEDAALMIHGALANI  210 (230)
T ss_dssp             HH-------HHHHHTT-TSSCEEEEEEECCC-------------------------------CCCHHHHHHHHHHHCCEE
T ss_pred             HH-------HHHHHHH-hcCeEEEEEECCcccChHHHhcCC---------------CCCcccCCCHHHHHHHHHHHHhCc
Confidence            11       0111111 238999999999988763211100               011234789999999999998755


Q ss_pred             C
Q 017977          281 S  281 (363)
Q Consensus       281 ~  281 (363)
                      .
T Consensus       211 ~  211 (230)
T 3guy_A          211 G  211 (230)
T ss_dssp             T
T ss_pred             C
Confidence            4

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.81  E-value=6.1e-20  Score=163.86  Aligned_cols=218  Identities=11%  Similarity=0.002  Sum_probs=133.9

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCC----C--CccccCcccccCcchHHhhcc-------
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG----K--KTRFFPGVMIAEEPQWRDCIQ-------  115 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~--~~~~~~~~d~~~~~~~~~~~~-------  115 (363)
                      .+++||||||+|+||++++++|+++|++|++++|+..+.+.....    .  .......+|+.|.+++.++++       
T Consensus         7 ~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   86 (319)
T 3ioy_A            7 AGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFG   86 (319)
T ss_dssp             TTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhCC
Confidence            456899999999999999999999999999999987654332110    0  012245689999988887765       


Q ss_pred             CCCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC-C-C------CCCCeEEEeccceecCCccccccc
Q 017977          116 GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES-P-E------GVRPSVLELVKPKYLMRAAHQEMI  184 (363)
Q Consensus       116 ~~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~------~~~~~v~~SS~~~~yg~~~~~e~~  184 (363)
                      ++|+|||+||.....   ..+.+..+..+++|+.++.++++++.+. . .      +..++|++||.++..+       .
T Consensus        87 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~-------~  159 (319)
T 3ioy_A           87 PVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLA-------A  159 (319)
T ss_dssp             CEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCC-------C
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccC-------C
Confidence            579999999974332   2345667889999999999999988763 0 1      2456999999854332       2


Q ss_pred             CCCcchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHH----HHHHhCCCCCCC-CC
Q 017977          185 TWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPL----FMMFAGGPLGSG-QQ  259 (363)
Q Consensus       185 ~~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~----~~~~~~~~~~~~-~~  259 (363)
                      +....|..+|.+...|.      +.+..+ +.. .|+++++++||.|.++...........    ........+... ..
T Consensus       160 ~~~~~Y~aSKaal~~~~------~~la~e-~~~-~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (319)
T 3ioy_A          160 GSPGIYNTTKFAVRGLS------ESLHYS-LLK-YEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGV  231 (319)
T ss_dssp             SSSHHHHHHHHHHHHHH------HHHHHH-HGG-GTCEEEEECCCCBC-----------------------------CCG
T ss_pred             CCCHHHHHHHHHHHHHH------HHHHHH-hhh-cCCEEEEEEcCeEccCcccccccCchhhcccccchhHHHHHHHHHh
Confidence            23345555543322222      111111 122 389999999999987643211000000    000000001110 11


Q ss_pred             ccccccHHHHHHHHHHHhcCCC
Q 017977          260 WFSWIHLDDIVNLIYEALSNPS  281 (363)
Q Consensus       260 ~~~~i~v~D~a~a~~~~~~~~~  281 (363)
                      ....++++|+|++++.+++.+.
T Consensus       232 ~~~~~~pe~vA~~~~~al~~~~  253 (319)
T 3ioy_A          232 HEFGMEPDVIGARVIEAMKANR  253 (319)
T ss_dssp             GGSSBCHHHHHHHHHHHHHTTC
T ss_pred             hhcCCCHHHHHHHHHHHHHcCC
Confidence            1123899999999999998753

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.81  E-value=4.1e-19  Score=154.51  Aligned_cols=220  Identities=15%  Similarity=0.066  Sum_probs=138.1

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCc-cccc----CCCCCccccCcccccCcchHHhhcc-------C
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK-AELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (363)
                      .+++++||||+|+||++++++|+++|++|++++++... .+..    ...........+|+.|.+++.++++       +
T Consensus        26 ~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  105 (267)
T 3u5t_A           26 TNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFGG  105 (267)
T ss_dssp             -CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            45689999999999999999999999999998655433 2211    1111122245689999988887765       6


Q ss_pred             CCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhhh
Q 017977          117 STAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAK  193 (363)
Q Consensus       117 ~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~  193 (363)
                      +|++||+||.....   ....+..+..+++|+.++.++++++.+......++|++||..+..+       .+....|..+
T Consensus       106 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------~~~~~~Y~as  178 (267)
T 3u5t_A          106 VDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLL-------HPSYGIYAAA  178 (267)
T ss_dssp             EEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHC-------CTTCHHHHHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccC-------CCCchHHHHH
Confidence            89999999975332   2345567888999999999999988763112347999998843222       2333455555


Q ss_pred             hhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCc--ccchHHHHHHHhCCCCCCCCCccccccHHHHHH
Q 017977          194 VYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA--LAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVN  271 (363)
Q Consensus       194 ~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  271 (363)
                      |.+...+.++       ....+ ...|+++..++||.+..+....  ......  ......++      ..+..++|+|+
T Consensus       179 Kaa~~~l~~~-------la~e~-~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~--~~~~~~p~------~r~~~pedvA~  242 (267)
T 3u5t_A          179 KAGVEAMTHV-------LSKEL-RGRDITVNAVAPGPTATDLFLEGKSDEVRD--RFAKLAPL------ERLGTPQDIAG  242 (267)
T ss_dssp             HHHHHHHHHH-------HHHHT-TTSCCEEEEEEECCBC-----------CHH--HHHTSSTT------CSCBCHHHHHH
T ss_pred             HHHHHHHHHH-------HHHHh-hhhCCEEEEEEECCCcCccccccCCHHHHH--HHHhcCCC------CCCcCHHHHHH
Confidence            4332222211       11111 1238999999999998764211  111111  11122222      24788999999


Q ss_pred             HHHHHhcCCC--CCc-eEEeeCC
Q 017977          272 LIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       272 a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      +++.++....  ..| .+++.+|
T Consensus       243 ~v~~L~s~~~~~itG~~i~vdGG  265 (267)
T 3u5t_A          243 AVAFLAGPDGAWVNGQVLRANGG  265 (267)
T ss_dssp             HHHHHHSTTTTTCCSEEEEESSS
T ss_pred             HHHHHhCccccCccCCEEEeCCC
Confidence            9999997654  345 7777665

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.81  E-value=1.4e-19  Score=155.76  Aligned_cols=211  Identities=14%  Similarity=0.112  Sum_probs=137.0

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCC----CCCccccCcccccCcchHHhhcc-------CC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (363)
                      .+++++||||+|+||+++++.|+++|++|++++|+....+....    .........+|+.|.+++.++++       ++
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i   85 (247)
T 2jah_A            6 QGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGGL   85 (247)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            34789999999999999999999999999999998755332211    11112244689999988877664       78


Q ss_pred             CEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhh
Q 017977          118 TAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCA  192 (363)
Q Consensus       118 d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~  192 (363)
                      |+|||+||.....   ..+.+..+..+++|+.++.++++++.+.  ..+ .++|++||.++..+       .+....|..
T Consensus        86 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~-------~~~~~~Y~a  157 (247)
T 2jah_A           86 DILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVN-------VRNAAVYQA  157 (247)
T ss_dssp             SEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCC-------CTTCHHHHH
T ss_pred             CEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCC-------CCCCcHHHH
Confidence            9999999974332   2355667889999999999999887642  134 68999999844222       233345655


Q ss_pred             hhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHH
Q 017977          193 KVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL  272 (363)
Q Consensus       193 ~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a  272 (363)
                      +|.+...+.++       ....+. ..|+++++++||.+.++....... ..........+     ....+++++|+|++
T Consensus       158 sK~a~~~~~~~-------la~e~~-~~gi~v~~v~PG~v~T~~~~~~~~-~~~~~~~~~~~-----~~~~~~~pedvA~~  223 (247)
T 2jah_A          158 TKFGVNAFSET-------LRQEVT-ERGVRVVVIEPGTTDTELRGHITH-TATKEMYEQRI-----SQIRKLQAQDIAEA  223 (247)
T ss_dssp             HHHHHHHHHHH-------HHHHHG-GGTCEEEEEEECSBSSSGGGGCCC-HHHHHHHHHHT-----TTSCCBCHHHHHHH
T ss_pred             HHHHHHHHHHH-------HHHHhc-ccCcEEEEEECCCCCCcchhcccc-hhhHHHHHhcc-----cccCCCCHHHHHHH
Confidence            54333222211       111111 238999999999998764221110 00001111111     01125899999999


Q ss_pred             HHHHhcCCC
Q 017977          273 IYEALSNPS  281 (363)
Q Consensus       273 ~~~~~~~~~  281 (363)
                      ++.++..+.
T Consensus       224 v~~l~s~~~  232 (247)
T 2jah_A          224 VRYAVTAPH  232 (247)
T ss_dssp             HHHHHHSCT
T ss_pred             HHHHhCCCc
Confidence            999998654

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.81  E-value=3.2e-19  Score=152.97  Aligned_cols=206  Identities=13%  Similarity=0.039  Sum_probs=138.3

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc---------CCCE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ---------GSTA  119 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---------~~d~  119 (363)
                      ++++|+||||+|+||++++++|+++|++|++++|+.......      .....+|+.|.+++.++++         ++|+
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~------~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~   79 (241)
T 1dhr_A            6 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASA------SVIVKMTDSFTEQADQVTAEVGKLLGDQKVDA   79 (241)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTSSE------EEECCCCSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhccCC------cEEEEcCCCCHHHHHHHHHHHHHHhCCCCCCE
Confidence            457899999999999999999999999999999987653311      1245689998888877664         6899


Q ss_pred             EEEccCCCCCCC----CChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhhhhh
Q 017977          120 VVNLAGTPIGTR----WSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVY  195 (363)
Q Consensus       120 Vi~~a~~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~  195 (363)
                      |||+||......    ...+..+..+++|+.++.++++++.+......++|++||.++..+       .+....|..+  
T Consensus        80 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------~~~~~~Y~as--  150 (241)
T 1dhr_A           80 ILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDG-------TPGMIGYGMA--  150 (241)
T ss_dssp             EEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC-------CTTBHHHHHH--
T ss_pred             EEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccC-------CCCchHHHHH--
Confidence            999999753322    234556778999999999999999863111257999999843222       1222344444  


Q ss_pred             hcccchhhHHHHHHHHHHHhcc----CCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHH
Q 017977          196 CLVSFNRGVLVCREWEGTALKV----NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVN  271 (363)
Q Consensus       196 ~~~~y~~~k~~~~~~~~~~~~~----~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  271 (363)
                              |.....+.......    ..|+++++++||.+-.+..       ...  ...      .....++..+|+|+
T Consensus       151 --------K~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~-------~~~--~~~------~~~~~~~~~~~vA~  207 (241)
T 1dhr_A          151 --------KGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMN-------RKS--MPE------ADFSSWTPLEFLVE  207 (241)
T ss_dssp             --------HHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHH-------HHH--STT------SCGGGSEEHHHHHH
T ss_pred             --------HHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCccc-------ccc--Ccc------hhhccCCCHHHHHH
Confidence                    43333322222221    2489999999998875421       100  000      11234678999999


Q ss_pred             HHHHHhcCCC--CCc-eEEeeCCC
Q 017977          272 LIYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       272 a~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      +++.++....  ..| .+.+.++.
T Consensus       208 ~v~~l~~~~~~~~~G~~~~v~g~~  231 (241)
T 1dhr_A          208 TFHDWITGNKRPNSGSLIQVVTTD  231 (241)
T ss_dssp             HHHHHHTTTTCCCTTCEEEEEEET
T ss_pred             HHHHHhcCCCcCccceEEEEeCCC
Confidence            9999997544  334 67776643

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.81  E-value=4.6e-19  Score=154.34  Aligned_cols=228  Identities=16%  Similarity=0.085  Sum_probs=143.3

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCC------CCccccCcccccCcchHHhhcc---CCCE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG------KKTRFFPGVMIAEEPQWRDCIQ---GSTA  119 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~~~---~~d~  119 (363)
                      .+++++||||+|+||++++++|+++|++|++++|+.+........      ........+|+.+.+++.++++   ++|+
T Consensus         9 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~   88 (267)
T 3t4x_A            9 KGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVDI   88 (267)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCSE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCCE
Confidence            457899999999999999999999999999999987654322110      1111234578888888877665   7899


Q ss_pred             EEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhhh
Q 017977          120 VVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKV  194 (363)
Q Consensus       120 Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~  194 (363)
                      +||+||.....   ..+.+..+..+++|+.++.++.+++.+.  ..+..++|++||..+..+       .+....|..+|
T Consensus        89 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------~~~~~~Y~asK  161 (267)
T 3t4x_A           89 LINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMP-------SQEMAHYSATK  161 (267)
T ss_dssp             EEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSC-------CTTCHHHHHHH
T ss_pred             EEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccC-------CCcchHHHHHH
Confidence            99999975432   2345667788999999977776665432  145568999999854222       23334555554


Q ss_pred             hhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCc------------ccchHHHHHHHhCCCCCCCCCccc
Q 017977          195 YCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA------------LAKMIPLFMMFAGGPLGSGQQWFS  262 (363)
Q Consensus       195 ~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~  262 (363)
                      .+...+.++       ....+ ...|+++..++||.+.++....            .......+.... .+   ......
T Consensus       162 aa~~~l~~~-------la~e~-~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~r  229 (267)
T 3t4x_A          162 TMQLSLSRS-------LAELT-TGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKEN-RP---TSIIQR  229 (267)
T ss_dssp             HHHHHHHHH-------HHHHT-TTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHH-CT---TCSSCS
T ss_pred             HHHHHHHHH-------HHHHh-CCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhcc-CC---cccccC
Confidence            332222210       11111 1238999999999988752100            000000010000 00   011235


Q ss_pred             cccHHHHHHHHHHHhcCCC--CCc-eEEeeCCCCcC
Q 017977          263 WIHLDDIVNLIYEALSNPS--YRG-VINGTAPNPVR  295 (363)
Q Consensus       263 ~i~v~D~a~a~~~~~~~~~--~~g-~~~i~~~~~~s  295 (363)
                      +.+++|+|++++.++....  ..| ++++.+|...+
T Consensus       230 ~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~~s  265 (267)
T 3t4x_A          230 LIRPEEIAHLVTFLSSPLSSAINGSALRIDGGLVRS  265 (267)
T ss_dssp             CBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTCSCS
T ss_pred             ccCHHHHHHHHHHHcCccccCccCCeEEECCCcccc
Confidence            8899999999999987543  344 88888876544

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.81  E-value=2.8e-19  Score=152.84  Aligned_cols=205  Identities=12%  Similarity=0.028  Sum_probs=136.2

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc---------CCCEE
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ---------GSTAV  120 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---------~~d~V  120 (363)
                      +++|+||||+|+||++++++|+++|++|++++|+..+....      .....+|+.|.+++.++++         ++|+|
T Consensus         3 ~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~------~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~l   76 (236)
T 1ooe_A            3 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADS------NILVDGNKNWTEQEQSILEQTASSLQGSQVDGV   76 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSSE------EEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccccc------cEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEE
Confidence            46899999999999999999999999999999987653321      1245689998887776654         78999


Q ss_pred             EEccCCCCCCC----CChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhhhhhh
Q 017977          121 VNLAGTPIGTR----WSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYC  196 (363)
Q Consensus       121 i~~a~~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~  196 (363)
                      ||+||......    ...+..+..+++|+.++.++++++.+......++|++||.++..+       .+....|..+   
T Consensus        77 v~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~-------~~~~~~Y~~s---  146 (236)
T 1ooe_A           77 FCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGP-------TPSMIGYGMA---  146 (236)
T ss_dssp             EECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC-------CTTBHHHHHH---
T ss_pred             EECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccC-------CCCcHHHHHH---
Confidence            99999743322    234556788999999999999998873111247999999843222       2223344444   


Q ss_pred             cccchhhHHHHHHHHHHHhcc----CCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHH
Q 017977          197 LVSFNRGVLVCREWEGTALKV----NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL  272 (363)
Q Consensus       197 ~~~y~~~k~~~~~~~~~~~~~----~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a  272 (363)
                             |.....+.......    ..|+++++++|+.+.++..       ...  ...      .....++..+|+|++
T Consensus       147 -------K~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~-------~~~--~~~------~~~~~~~~~~dvA~~  204 (236)
T 1ooe_A          147 -------KAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMN-------RKW--MPN------ADHSSWTPLSFISEH  204 (236)
T ss_dssp             -------HHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHH-------HHH--STT------CCGGGCBCHHHHHHH
T ss_pred             -------HHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcch-------hhc--CCC------ccccccCCHHHHHHH
Confidence                   43333322222211    2379999999999876521       100  000      112346789999999


Q ss_pred             HHHHhcCCC---CCc-eEEeeCCC
Q 017977          273 IYEALSNPS---YRG-VINGTAPN  292 (363)
Q Consensus       273 ~~~~~~~~~---~~g-~~~i~~~~  292 (363)
                      ++.++..+.   ..| .+++.++.
T Consensus       205 i~~~l~s~~~~~~~G~~~~v~gg~  228 (236)
T 1ooe_A          205 LLKWTTETSSRPSSGALLKITTEN  228 (236)
T ss_dssp             HHHHHHCGGGCCCTTCEEEEEEET
T ss_pred             HHHHHcCCCcccccccEEEEecCC
Confidence            987763322   234 77776653

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.80  E-value=2.2e-19  Score=155.18  Aligned_cols=220  Identities=13%  Similarity=0.036  Sum_probs=136.0

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc-------CCCEEEE
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVVN  122 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~Vi~  122 (363)
                      |++|+||||+|+||+++++.|+++|++|++++|+..+.+.... ... ....+...|.+++.++++       ++|+|||
T Consensus         1 Mk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~-~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lv~   78 (254)
T 1zmt_A            1 MSTAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAE-TYPQLKPMSEQEPAELIEAVTSAYGQVDVLVS   78 (254)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHH-HCTTSEECCCCSHHHHHHHHHHHHSCCCEEEE
T ss_pred             CeEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHh-cCCcEEEECHHHHHHHHHHHHHHhCCCCEEEE
Confidence            4689999999999999999999999999999998765433211 000 000111115555554443       7899999


Q ss_pred             ccCCC-CC---CCCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhhhhh
Q 017977          123 LAGTP-IG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYC  196 (363)
Q Consensus       123 ~a~~~-~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~  196 (363)
                      +||.. ..   ...+.+..+..+++|+.++.++++++.+.  ..+..++|++||..+.++       .+....|..+|.+
T Consensus        79 nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------~~~~~~Y~~sK~a  151 (254)
T 1zmt_A           79 NDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGP-------WKELSTYTSARAG  151 (254)
T ss_dssp             ECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSC-------CTTCHHHHHHHHH
T ss_pred             CCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccC-------CCCchHHHHHHHH
Confidence            99974 22   22355667889999999999998887532  134578999999844222       2233455555433


Q ss_pred             cccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc--cchH---H-HH-HHHhCCCCCCCCCccccccHHHH
Q 017977          197 LVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL--AKMI---P-LF-MMFAGGPLGSGQQWFSWIHLDDI  269 (363)
Q Consensus       197 ~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~--~~~~---~-~~-~~~~~~~~~~~~~~~~~i~v~D~  269 (363)
                      ...+.++       ....+. ..|+++++++|+.++|+.....  ..+.   + .. ......++      ..+.+++|+
T Consensus       152 ~~~~~~~-------la~e~~-~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~~~~~~~~p~------~~~~~p~dv  217 (254)
T 1zmt_A          152 ACTLANA-------LSKELG-EYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTAL------QRLGTQKEL  217 (254)
T ss_dssp             HHHHHHH-------HHHHHG-GGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSS------SSCBCHHHH
T ss_pred             HHHHHHH-------HHHHhh-hcCcEEEEEecCccccccccccCCCcccccChHHHHHHhccCCC------CCCcCHHHH
Confidence            3222211       111111 2389999999999988754221  1110   0 01 11111122      136889999


Q ss_pred             HHHHHHHhcCCC--CCc-eEEeeCCC
Q 017977          270 VNLIYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       270 a~a~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      |++++.++....  ..| .+++.++.
T Consensus       218 A~~v~~l~s~~~~~~tG~~~~vdgG~  243 (254)
T 1zmt_A          218 GELVAFLASGSCDYLTGQVFWLAGGF  243 (254)
T ss_dssp             HHHHHHHHTTSCGGGTTCEEEESTTC
T ss_pred             HHHHHHHhCcccCCccCCEEEECCCc
Confidence            999999997654  344 77777764

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.80  E-value=6.2e-20  Score=160.38  Aligned_cols=223  Identities=13%  Similarity=0.002  Sum_probs=144.0

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCC----CCCccccCcccccCcchHHhhcc------CC
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ------GS  117 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~------~~  117 (363)
                      ..+++++||||+|+||+++++.|+++|++|++++|+.........    .........+|+.|.+++.++++      ++
T Consensus        31 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~i  110 (275)
T 4imr_A           31 LRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAPV  110 (275)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSCC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCCC
Confidence            345789999999999999999999999999999998876443211    11222245689999988877765      68


Q ss_pred             CEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhh
Q 017977          118 TAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCA  192 (363)
Q Consensus       118 d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~  192 (363)
                      |++||+||.....   ..+.+..+..+++|+.++.++++++.+.  ..+..++|++||..+..       ..+....|..
T Consensus       111 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~-------~~~~~~~Y~a  183 (275)
T 4imr_A          111 DILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLR-------PKSVVTAYAA  183 (275)
T ss_dssp             CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-------CCTTBHHHHH
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCC-------CCCCchhhHH
Confidence            9999999975432   2355677889999999999999987432  13456799999984321       1122234666


Q ss_pred             hhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccc-hHHHH-HHHhCC-CCCCCCCccccccHHHH
Q 017977          193 KVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAK-MIPLF-MMFAGG-PLGSGQQWFSWIHLDDI  269 (363)
Q Consensus       193 ~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~-~~~~~-~~~~~~-~~~~~~~~~~~i~v~D~  269 (363)
                      +|.+...+.++       ....+. ..|+++..++||.+.++....... ..... ...... +++      .+..++|+
T Consensus       184 sKaa~~~l~~~-------la~e~~-~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~------r~~~pedv  249 (275)
T 4imr_A          184 TKAAQHNLIQS-------QARDFA-GDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLNWMG------RAGRPEEM  249 (275)
T ss_dssp             HHHHHHHHHHH-------HHHHHG-GGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHSTTC------SCBCGGGG
T ss_pred             HHHHHHHHHHH-------HHHHhc-ccCcEEEEEEeccccCcccccccccChHHHHHHHhhcCccC------CCcCHHHH
Confidence            54433322221       111111 238999999999998763211000 00011 111111 221      26779999


Q ss_pred             HHHHHHHhcCCC--CCc-eEEeeCC
Q 017977          270 VNLIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       270 a~a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      |++++.++....  ..| ++++.+|
T Consensus       250 A~~v~fL~s~~a~~itG~~i~vdGG  274 (275)
T 4imr_A          250 VGAALFLASEACSFMTGETIFLTGG  274 (275)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESSC
T ss_pred             HHHHHHHcCcccCCCCCCEEEeCCC
Confidence            999999997543  344 7777665

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.80  E-value=3.3e-19  Score=154.66  Aligned_cols=208  Identities=14%  Similarity=0.159  Sum_probs=132.5

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCC----CCCccccCcccccCcchHHhhcc-------CC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (363)
                      ++++++||||+|+||+++++.|+++|++|++++|+....+....    .........+|+.|.+++.++++       ++
T Consensus         3 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   82 (264)
T 3tfo_A            3 MDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRI   82 (264)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            34689999999999999999999999999999998765433211    11122244589999988877664       68


Q ss_pred             CEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhh
Q 017977          118 TAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCA  192 (363)
Q Consensus       118 d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~  192 (363)
                      |+|||+||.....   ..+.+..+..+++|+.++.++++++.+.  ..+..++|++||.++..+       .+....|..
T Consensus        83 D~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~-------~~~~~~Y~a  155 (264)
T 3tfo_A           83 DVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSV-------VPTAAVYCA  155 (264)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCC-------CTTCHHHHH
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHccc-------CCCChhHHH
Confidence            9999999975332   2355677889999999999888877542  134567999999854322       223345655


Q ss_pred             hhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHH
Q 017977          193 KVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL  272 (363)
Q Consensus       193 ~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a  272 (363)
                      +|.+...+.+         ....... |+++..++||.+.++.......-   .. ..  ...  .....+..++|+|++
T Consensus       156 sKaal~~l~~---------~la~e~~-gIrvn~v~PG~v~T~~~~~~~~~---~~-~~--~~~--~~~~~~~~pedvA~~  217 (264)
T 3tfo_A          156 TKFAVRAISD---------GLRQEST-NIRVTCVNPGVVESELAGTITHE---ET-MA--AMD--TYRAIALQPADIARA  217 (264)
T ss_dssp             HHHHHHHHHH---------HHHHHCS-SEEEEEEEECCC-------------------------------CCCHHHHHHH
T ss_pred             HHHHHHHHHH---------HHHHhCC-CCEEEEEecCCCcCcccccccch---hH-HH--HHH--hhhccCCCHHHHHHH
Confidence            5433222221         1111223 89999999999987643211000   00 00  000  001124789999999


Q ss_pred             HHHHhcCCC
Q 017977          273 IYEALSNPS  281 (363)
Q Consensus       273 ~~~~~~~~~  281 (363)
                      ++.+++.+.
T Consensus       218 v~~l~s~~~  226 (264)
T 3tfo_A          218 VRQVIEAPQ  226 (264)
T ss_dssp             HHHHHHSCT
T ss_pred             HHHHhcCCc
Confidence            999998876

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=99.80  E-value=5.5e-19  Score=150.94  Aligned_cols=222  Identities=14%  Similarity=0.085  Sum_probs=149.7

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCccccc----CCCCCccccCcccccCcchHHhhcc-------C
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (363)
                      .+.|+++||||++.||+++++.|+++|.+|++++|+.+..+..    ...........+|+.|.++++++++       +
T Consensus         5 L~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~   84 (254)
T 4fn4_A            5 LKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSR   84 (254)
T ss_dssp             GTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4557999999999999999999999999999999987654332    2222223355689999998877664       6


Q ss_pred             CCEEEEccCCCCC----CCCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcch
Q 017977          117 STAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDY  190 (363)
Q Consensus       117 ~d~Vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~  190 (363)
                      +|++||+||....    ...+.+.++..+++|+.++..+.+++.+.  ..+..++|++||..+..+       .+....|
T Consensus        85 iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~-------~~~~~~Y  157 (254)
T 4fn4_A           85 IDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRG-------GFAGAPY  157 (254)
T ss_dssp             CCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCS-------SSSCHHH
T ss_pred             CCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCC-------CCCChHH
Confidence            8999999996432    23466788999999999998887777653  234567999999865333       3444567


Q ss_pred             hhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCc-c--cch-HHHHHHHhCCCCCCCCCccccccH
Q 017977          191 CAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA-L--AKM-IPLFMMFAGGPLGSGQQWFSWIHL  266 (363)
Q Consensus       191 ~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~-~--~~~-~~~~~~~~~~~~~~~~~~~~~i~v  266 (363)
                      ..+|.+...++++  ++.+     +. .+|+++..|.||.|-.+.... .  ... ..... ....+++      .+..+
T Consensus       158 ~asKaal~~ltr~--lA~e-----la-~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~-~~~~~~~------R~g~p  222 (254)
T 4fn4_A          158 TVAKHGLIGLTRS--IAAH-----YG-DQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLT-KLMSLSS------RLAEP  222 (254)
T ss_dssp             HHHHHHHHHHHHH--HHHH-----HG-GGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHH-HHHTTCC------CCBCH
T ss_pred             HHHHHHHHHHHHH--HHHH-----hh-hhCeEEEEEEeCCCCCcccccccCCcHHHHHHHH-hcCCCCC------CCcCH
Confidence            7776555444432  1111     11 238999999999998763211 1  111 11111 0001111      25679


Q ss_pred             HHHHHHHHHHhcCCC--CCc-eEEeeCC
Q 017977          267 DDIVNLIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       267 ~D~a~a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      +|+|++++.++....  ..| .+.+.+|
T Consensus       223 ediA~~v~fLaSd~a~~iTG~~i~VDGG  250 (254)
T 4fn4_A          223 EDIANVIVFLASDEASFVNGDAVVVDGG  250 (254)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHHHhCchhcCCcCCEEEeCCC
Confidence            999999999997544  345 7777665

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.80  E-value=1.4e-19  Score=158.38  Aligned_cols=210  Identities=12%  Similarity=-0.014  Sum_probs=134.6

Q ss_pred             CccEEEEecCcchHHHHHHHHHHh-CCCEEEEEeCCCCcccccC----CCCCccccCcccccCcchHHhhcc-------C
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQA-DNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (363)
                      .+++|+||||+|+||++++++|++ +|++|++++|+........    .......+..+|+.|.+++.++++       +
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   82 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG   82 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            457899999999999999999999 9999999999865433211    111112245689999888887776       7


Q ss_pred             CCEEEEccCCCCCCCC--C-hhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC-Cc------------cc
Q 017977          117 STAVVNLAGTPIGTRW--S-SEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM-RA------------AH  180 (363)
Q Consensus       117 ~d~Vi~~a~~~~~~~~--~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg-~~------------~~  180 (363)
                      +|+|||+||.......  . .+..+..+++|+.++.++++++.+......++|++||..+.++ ..            .+
T Consensus        83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~  162 (276)
T 1wma_A           83 LDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETI  162 (276)
T ss_dssp             EEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSSC
T ss_pred             CCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhcccccc
Confidence            8999999997533211  1 3566788999999999999999883111247999999854332 10            11


Q ss_pred             ccccCCC--cchh---------hhhhhcccchhhHHHHHHHHHHHh---cc---CCCceEEEEeeceEEeCCCCcccchH
Q 017977          181 QEMITWL--SDYC---------AKVYCLVSFNRGVLVCREWEGTAL---KV---NKDVRLALIRIGIVLGKDGGALAKMI  243 (363)
Q Consensus       181 ~e~~~~~--~~~~---------~~~~~~~~y~~~k~~~~~~~~~~~---~~---~~~~~~~ilRp~~v~g~~~~~~~~~~  243 (363)
                      +|+....  ..|.         ...+....|..+|...........   ..   ..++++++++||.+.++....     
T Consensus       163 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~-----  237 (276)
T 1wma_A          163 TEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP-----  237 (276)
T ss_dssp             CHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT-----
T ss_pred             chhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCc-----
Confidence            1211000  0000         000011335555533332222211   11   038999999999988764221     


Q ss_pred             HHHHHHhCCCCCCCCCccccccHHHHHHHHHHHhcCC
Q 017977          244 PLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNP  280 (363)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~  280 (363)
                                       ..+.+++|+|++++.++..+
T Consensus       238 -----------------~~~~~~~~~a~~~~~l~~~~  257 (276)
T 1wma_A          238 -----------------KATKSPEEGAETPVYLALLP  257 (276)
T ss_dssp             -----------------TCSBCHHHHTHHHHHHHSCC
T ss_pred             -----------------cccCChhHhhhhHhhhhcCc
Confidence                             13689999999999999754

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.80  E-value=9.1e-20  Score=159.83  Aligned_cols=215  Identities=13%  Similarity=0.015  Sum_probs=137.1

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCC-----CCccccCcccccCcchHHhhcc-------
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KKTRFFPGVMIAEEPQWRDCIQ-------  115 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~-------  115 (363)
                      ..++++|||||+|+||++++++|+++|++|++++|+.+..+.....     ........+|+.|.+++.++++       
T Consensus        31 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  110 (281)
T 4dry_A           31 GEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFA  110 (281)
T ss_dssp             ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            3457899999999999999999999999999999987654332111     0111245689999988877764       


Q ss_pred             CCCEEEEccCCCCC----CCCChhhHHHHHHHHHHHHHHHHHHHHhC--CCC--CCCeEEEeccceecCCcccccccCCC
Q 017977          116 GSTAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEG--VRPSVLELVKPKYLMRAAHQEMITWL  187 (363)
Q Consensus       116 ~~d~Vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~--~~~~v~~SS~~~~yg~~~~~e~~~~~  187 (363)
                      ++|+|||+||....    ...+.+..+..+++|+.++.++.+++.+.  ..+  ..++|++||..+..+       .+..
T Consensus       111 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~-------~~~~  183 (281)
T 4dry_A          111 RLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTP-------RPNS  183 (281)
T ss_dssp             CCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCC-------CTTC
T ss_pred             CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCC-------CCCC
Confidence            67999999997432    23456777889999999988887776643  122  457999999854322       2334


Q ss_pred             cchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHH
Q 017977          188 SDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLD  267 (363)
Q Consensus       188 ~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  267 (363)
                      ..|..+|.+...+.++       ....+. ..|+.+..++||.+..+.......-       .... ........++.++
T Consensus       184 ~~Y~asKaa~~~l~~~-------la~e~~-~~gI~vn~v~PG~v~T~~~~~~~~~-------~~~~-~~~~~~~~~~~pe  247 (281)
T 4dry_A          184 APYTATKHAITGLTKS-------TALDGR-MHDIACGQIDIGNAATDMTARMSTG-------VLQA-NGEVAAEPTIPIE  247 (281)
T ss_dssp             HHHHHHHHHHHHHHHH-------HHHHHG-GGTEEEEEEEEECBCC-------CE-------EECT-TSCEEECCCBCHH
T ss_pred             hhHHHHHHHHHHHHHH-------HHHHhc-ccCeEEEEEEECcCcChhhhhhcch-------hhhh-hhcccccCCCCHH
Confidence            4566665433333221       111111 2389999999999987632111000       0000 0011122378999


Q ss_pred             HHHHHHHHHhcCCCCCce
Q 017977          268 DIVNLIYEALSNPSYRGV  285 (363)
Q Consensus       268 D~a~a~~~~~~~~~~~g~  285 (363)
                      |+|++++.++..+....+
T Consensus       248 dvA~~v~fL~s~~~~~~i  265 (281)
T 4dry_A          248 HIAEAVVYMASLPLSANV  265 (281)
T ss_dssp             HHHHHHHHHHHSCTTEEE
T ss_pred             HHHHHHHHHhCCCccCcc
Confidence            999999999998774443

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.80  E-value=6.1e-19  Score=154.44  Aligned_cols=228  Identities=14%  Similarity=0.064  Sum_probs=143.9

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCC-------------cccc----cCCCCCccccCcccccCcchH
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS-------------KAEL----IFPGKKTRFFPGVMIAEEPQW  110 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~-------------~~~~----~~~~~~~~~~~~~d~~~~~~~  110 (363)
                      ..+++++||||+|+||+++++.|+++|++|++++|+..             ....    +...........+|+.|.+++
T Consensus         9 l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (277)
T 3tsc_A            9 LEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRL   88 (277)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred             cCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence            34578999999999999999999999999999998522             1111    011111122445799998888


Q ss_pred             Hhhcc-------CCCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCC-CCCeEEEeccceecCC
Q 017977          111 RDCIQ-------GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLELVKPKYLMR  177 (363)
Q Consensus       111 ~~~~~-------~~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~-~~~~v~~SS~~~~yg~  177 (363)
                      .++++       ++|++||+||.....   ..+.+..+..+++|+.++.++++++...  ..+ ..++|++||..+..+ 
T Consensus        89 ~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~-  167 (277)
T 3tsc_A           89 RKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKM-  167 (277)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC-
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCCC-
Confidence            77764       589999999975432   3456677889999999999999886542  022 457999999854222 


Q ss_pred             cccccccCCCcchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCC-----
Q 017977          178 AAHQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGG-----  252 (363)
Q Consensus       178 ~~~~e~~~~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~-----  252 (363)
                            .+....|..+|.+...+.++       ....+. ..|+++..++||.+.++..... ............     
T Consensus       168 ------~~~~~~Y~asKaa~~~~~~~-------la~e~~-~~gi~vn~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~~~~  232 (277)
T 3tsc_A          168 ------QPFMIHYTASKHAVTGLARA-------FAAELG-KHSIRVNSVHPGPVNTPMGSGD-MVTAVGQAMETNPQLSH  232 (277)
T ss_dssp             ------CSSCHHHHHHHHHHHHHHHH-------HHHHHG-GGTEEEEEEEESSBSSGGGSHH-HHHHHHHHHHTCGGGTT
T ss_pred             ------CCCchhhHHHHHHHHHHHHH-------HHHHhC-ccCeEEEEEEeCCCcCCcccch-hhhhhhhcccccHHHHH
Confidence                  23334566554333222211       111111 2389999999999987643210 000011111010     


Q ss_pred             CCCCCCCccccccHHHHHHHHHHHhcCCC--CCc-eEEeeCCC
Q 017977          253 PLGSGQQWFSWIHLDDIVNLIYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       253 ~~~~~~~~~~~i~v~D~a~a~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      .+... ....+.+++|+|++++.++....  ..| ++++.+|.
T Consensus       233 ~~~~~-~p~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~  274 (277)
T 3tsc_A          233 VLTPF-LPDWVAEPEDIADTVCWLASDESRKVTAAQIPVDQGS  274 (277)
T ss_dssp             TTCCS-SSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             Hhhhc-cCCCCCCHHHHHHHHHHHhCccccCCcCCEEeeCCCc
Confidence            11111 11248899999999999997543  344 78887764

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=99.80  E-value=8.2e-19  Score=148.50  Aligned_cols=223  Identities=17%  Similarity=0.136  Sum_probs=150.3

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCc--ccccCCCCCccccCcccccCcchHHhhcc--CCCEEEEc
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK--AELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNL  123 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~--~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~Vi~~  123 (363)
                      ..+|+++||||++.||+++++.|+++|.+|.+.+|+..+  .+.+...........+|+.|.++++++++  ++|++|||
T Consensus         7 L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiLVNN   86 (247)
T 4hp8_A            7 LEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDILVNN   86 (247)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCEEEEC
T ss_pred             CCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCEEEEC
Confidence            346799999999999999999999999999999998643  12222222233355689999988887775  58999999


Q ss_pred             cCCCCC---CCCChhhHHHHHHHHHHHHHHHHHHHHhC--CC-CCCCeEEEeccceecCCcccccccCCCcchhhhhhhc
Q 017977          124 AGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PE-GVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCL  197 (363)
Q Consensus       124 a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~-~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~  197 (363)
                      ||....   ...+++.++.++++|+.++..+.+++.+.  .. ...++|++||..+..+       .+....|..+|.+.
T Consensus        87 AGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g-------~~~~~~Y~asKaav  159 (247)
T 4hp8_A           87 AGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQG-------GIRVPSYTAAKHGV  159 (247)
T ss_dssp             CCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC-------CSSCHHHHHHHHHH
T ss_pred             CCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCC-------CCCChHHHHHHHHH
Confidence            997544   23466788999999999998888875542  12 2457999999854333       34445777776655


Q ss_pred             ccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHH-HHHhCCCCCCCCCccccccHHHHHHHHHHH
Q 017977          198 VSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEA  276 (363)
Q Consensus       198 ~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~  276 (363)
                      ..++++  ++.+     +.. +|+++..|.||.|-.+.......-.... ......|++      .+-.++|+|.+++.+
T Consensus       160 ~~ltr~--lA~E-----la~-~gIrVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~~Plg------R~g~peeiA~~v~fL  225 (247)
T 4hp8_A          160 AGLTKL--LANE-----WAA-KGINVNAIAPGYIETNNTEALRADAARNKAILERIPAG------RWGHSEDIAGAAVFL  225 (247)
T ss_dssp             HHHHHH--HHHH-----HGG-GTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHTTCTTS------SCBCTHHHHHHHHHH
T ss_pred             HHHHHH--HHHH-----Hhh-cCeEEEEEeeCCCCCcchhhcccCHHHHHHHHhCCCCC------CCcCHHHHHHHHHHH
Confidence            444432  1111     112 3999999999999766321110001111 223333443      256789999999999


Q ss_pred             hcCCC--CCc-eEEeeCC
Q 017977          277 LSNPS--YRG-VINGTAP  291 (363)
Q Consensus       277 ~~~~~--~~g-~~~i~~~  291 (363)
                      +....  ..| .+.+.+|
T Consensus       226 aSd~a~~iTG~~i~VDGG  243 (247)
T 4hp8_A          226 SSAAADYVHGAILNVDGG  243 (247)
T ss_dssp             TSGGGTTCCSCEEEESTT
T ss_pred             hCchhcCCcCCeEEECcc
Confidence            87544  345 6666665

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.80  E-value=1.1e-19  Score=157.87  Aligned_cols=221  Identities=14%  Similarity=0.060  Sum_probs=140.0

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccC----CCCCccccCcccccCcchHHhhcc-------CC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (363)
                      .+++++||||+|+||+++++.|+++|++|++++|+....+...    ..........+|+.|.+++.++++       ++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   85 (262)
T 1zem_A            6 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKI   85 (262)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            3478999999999999999999999999999999875533221    111112244579999888776664       78


Q ss_pred             CEEEEccCCC-CC---CCCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchh
Q 017977          118 TAVVNLAGTP-IG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYC  191 (363)
Q Consensus       118 d~Vi~~a~~~-~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~  191 (363)
                      |+|||+||.. ..   .....+..+..+++|+.++.++++++.+.  ..+..++|++||..+.++       .+....|.
T Consensus        86 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------~~~~~~Y~  158 (262)
T 1zem_A           86 DFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKG-------PPNMAAYG  158 (262)
T ss_dssp             CEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSC-------CTTBHHHH
T ss_pred             CEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccC-------CCCCchHH
Confidence            9999999964 21   23355667889999999999998887652  124568999999844332       22233455


Q ss_pred             hhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc-------------cchHH-HHH-HHhCCCCCC
Q 017977          192 AKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL-------------AKMIP-LFM-MFAGGPLGS  256 (363)
Q Consensus       192 ~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~-------------~~~~~-~~~-~~~~~~~~~  256 (363)
                      .+|.+...+.+      .+.. .+. ..|+++++++||.+..+.....             ..--. ... .....|++ 
T Consensus       159 asK~a~~~~~~------~la~-e~~-~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-  229 (262)
T 1zem_A          159 TSKGAIIALTE------TAAL-DLA-PYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMR-  229 (262)
T ss_dssp             HHHHHHHHHHH------HHHH-HHG-GGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTS-
T ss_pred             HHHHHHHHHHH------HHHH-HHH-hhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHhcCCCC-
Confidence            55433222221      1111 111 2389999999998876521100             00000 111 11122221 


Q ss_pred             CCCccccccHHHHHHHHHHHhcCCC--CCc-eEEeeC
Q 017977          257 GQQWFSWIHLDDIVNLIYEALSNPS--YRG-VINGTA  290 (363)
Q Consensus       257 ~~~~~~~i~v~D~a~a~~~~~~~~~--~~g-~~~i~~  290 (363)
                           .+..++|+|++++.++....  ..| .+.+.+
T Consensus       230 -----r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdG  261 (262)
T 1zem_A          230 -----RYGDINEIPGVVAFLLGDDSSFMTGVNLPIAG  261 (262)
T ss_dssp             -----SCBCGGGSHHHHHHHHSGGGTTCCSCEEEESC
T ss_pred             -----CCcCHHHHHHHHHHHcCchhcCcCCcEEecCC
Confidence                 36789999999999987533  345 665554

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.80  E-value=7.1e-19  Score=151.07  Aligned_cols=213  Identities=15%  Similarity=0.074  Sum_probs=135.5

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEE-e--CCCCcccccCCCCCccccCcccccCcchHHhhcc-------CCCEE
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVL-T--RSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAV  120 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~-~--r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~V  120 (363)
                      ++++||||+|+||+++++.|+++|++|+++ +  |+....+......     .+.++.|.+++.++++       ++|+|
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~-----~~~~~~~~~~v~~~~~~~~~~~g~iD~l   76 (244)
T 1zmo_A            2 VIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN-----PGTIALAEQKPERLVDATLQHGEAIDTI   76 (244)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS-----TTEEECCCCCGGGHHHHHGGGSSCEEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh-----CCCcccCHHHHHHHHHHHHHHcCCCCEE
Confidence            689999999999999999999999999999 6  8875544322110     1234446655554443       68999


Q ss_pred             EEccCCCCC---C---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhh
Q 017977          121 VNLAGTPIG---T---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCA  192 (363)
Q Consensus       121 i~~a~~~~~---~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~  192 (363)
                      ||+||....   .   ..+.+..+..+++|+.++.++++++.+.  ..+..++|++||..+..+       .+....|..
T Consensus        77 v~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~-------~~~~~~Y~a  149 (244)
T 1zmo_A           77 VSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKP-------LAYNPLYGP  149 (244)
T ss_dssp             EECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSC-------CTTCTTHHH
T ss_pred             EECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCC-------CCCchHHHH
Confidence            999997432   1   2345667889999999999998887632  145577999999843222       233345665


Q ss_pred             hhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCC---Cccc--chHHHHHHHh-CCCCCCCCCccccccH
Q 017977          193 KVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDG---GALA--KMIPLFMMFA-GGPLGSGQQWFSWIHL  266 (363)
Q Consensus       193 ~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~---~~~~--~~~~~~~~~~-~~~~~~~~~~~~~i~v  266 (363)
                      +|.+...+.++       ....+. ..|+++++++||.+..+..   ....  ....  .... ..+++      .+..+
T Consensus       150 sK~a~~~~~~~-------la~e~~-~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~--~~~~~~~p~~------r~~~p  213 (244)
T 1zmo_A          150 ARAATVALVES-------AAKTLS-RDGILLYAIGPNFFNNPTYFPTSDWENNPELR--ERVDRDVPLG------RLGRP  213 (244)
T ss_dssp             HHHHHHHHHHH-------HHHHHG-GGTEEEEEEEESSBCBTTTBCHHHHHHCHHHH--HHHHHHCTTC------SCBCH
T ss_pred             HHHHHHHHHHH-------HHHHHh-hcCcEEEEEeeCCCcCCcccccccccchHHHH--HHHhcCCCCC------CCcCH
Confidence            54333222211       111111 2389999999999987643   1110  0111  1111 12221      36789


Q ss_pred             HHHHHHHHHHhcCCC--CCc-eEEeeCC
Q 017977          267 DDIVNLIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       267 ~D~a~a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      +|+|++++.++....  ..| .+.+.+|
T Consensus       214 e~vA~~v~~l~s~~~~~~tG~~i~vdgG  241 (244)
T 1zmo_A          214 DEMGALITFLASRRAAPIVGQFFAFTGG  241 (244)
T ss_dssp             HHHHHHHHHHHTTTTGGGTTCEEEESTT
T ss_pred             HHHHHHHHHHcCccccCccCCEEEeCCC
Confidence            999999999997654  345 6666655

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.80  E-value=9.3e-19  Score=151.45  Aligned_cols=224  Identities=14%  Similarity=0.073  Sum_probs=141.9

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeC-CCCccccc----CCCCCccccCcccccCcchHHhhcc-------
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTR-SRSKAELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------  115 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-------  115 (363)
                      ..+++|+||||+|+||++++++|+++|++|+++++ +.......    ...........+|+.|.++++.+++       
T Consensus         5 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   84 (255)
T 3icc_A            5 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ   84 (255)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhc
Confidence            34578999999999999999999999999998754 44332221    1111112244578888877766554       


Q ss_pred             ------CCCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCC
Q 017977          116 ------GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITW  186 (363)
Q Consensus       116 ------~~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~  186 (363)
                            .+|+|||+||.....   ....+..+..+++|+.++.++++++.+......++|++||.++..+       .+.
T Consensus        85 ~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~-------~~~  157 (255)
T 3icc_A           85 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRIS-------LPD  157 (255)
T ss_dssp             HHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSC-------CTT
T ss_pred             ccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccC-------CCC
Confidence                  289999999974332   2345566788999999999999999873113347999999854222       223


Q ss_pred             CcchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHH-HHHhCCCCCCCCCcccccc
Q 017977          187 LSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIH  265 (363)
Q Consensus       187 ~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~  265 (363)
                      ...|..+|.+...|.++       ....+. ..++++..++||.+..+.......-.... ......++      ..+.+
T Consensus       158 ~~~Y~asKaa~~~~~~~-------la~e~~-~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~------~~~~~  223 (255)
T 3icc_A          158 FIAYSMTKGAINTMTFT-------LAKQLG-ARGITVNAILPGFVKTDMNAELLSDPMMKQYATTISAF------NRLGE  223 (255)
T ss_dssp             BHHHHHHHHHHHHHHHH-------HHHHHG-GGTCEEEEEEECCBCCSSSTTTTTSHHHHHHHHHTSTT------SSCBC
T ss_pred             cchhHHhHHHHHHHHHH-------HHHHHH-hcCeEEEEEEEeeecccchhhhcccHHHHHhhhccCCc------CCCCC
Confidence            34555554333222211       111111 13899999999999887532211111111 11112222      24678


Q ss_pred             HHHHHHHHHHHhcCCC--CCc-eEEeeCCC
Q 017977          266 LDDIVNLIYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       266 v~D~a~a~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      ++|+|+++..++....  ..| .+++.+|.
T Consensus       224 ~~dva~~~~~l~s~~~~~~tG~~i~vdgG~  253 (255)
T 3icc_A          224 VEDIADTAAFLASPDSRWVTGQLIDVSGGS  253 (255)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESSST
T ss_pred             HHHHHHHHHHHhCcccCCccCCEEEecCCe
Confidence            9999999999886543  344 88888764

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.80  E-value=1.7e-19  Score=155.04  Aligned_cols=213  Identities=16%  Similarity=0.042  Sum_probs=121.8

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcch---HHhh---ccCCCEEEE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQ---WRDC---IQGSTAVVN  122 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~---~~~~---~~~~d~Vi~  122 (363)
                      .+++|+||||+|+||+++++.|++ |+.|++++|+............ .....+|+.+.+.   +.+.   +.++|+|||
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~~~~-~~~~~~D~~~~~~~~~~~~~~~~~~~id~lv~   81 (245)
T 3e9n_A            4 KKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAEIEG-VEPIESDIVKEVLEEGGVDKLKNLDHVDTLVH   81 (245)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHTSTT-EEEEECCHHHHHHTSSSCGGGTTCSCCSEEEE
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHhhcC-CcceecccchHHHHHHHHHHHHhcCCCCEEEE
Confidence            346899999999999999999988 9999999998766544433111 1234467665532   2222   336899999


Q ss_pred             ccCCCCCCC---CChhhHHHHHHHHHHHHHHHHHHHHhC-CCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhcc
Q 017977          123 LAGTPIGTR---WSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLV  198 (363)
Q Consensus       123 ~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~  198 (363)
                      +||......   .+.+..+..+++|+.++.++++++... .....++|++||..+..+       .+....|..+|.+..
T Consensus        82 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~-------~~~~~~Y~asK~a~~  154 (245)
T 3e9n_A           82 AAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAASGCVIYINSGAGNGP-------HPGNTIYAASKHALR  154 (245)
T ss_dssp             CC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEC-----------------CHHHHHHHHHHH
T ss_pred             CCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEcCcccccC-------CCCchHHHHHHHHHH
Confidence            999754322   234456778999999988888777532 112267999999843222       223345555543322


Q ss_pred             cchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHHHHHhc
Q 017977          199 SFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALS  278 (363)
Q Consensus       199 ~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~  278 (363)
                      .+.++       ....+. ..|+++++++||.+.++.....   ....        ........+++++|+|++++.+++
T Consensus       155 ~~~~~-------la~e~~-~~gi~v~~v~PG~v~t~~~~~~---~~~~--------~~~~~~~~~~~p~dvA~~i~~l~~  215 (245)
T 3e9n_A          155 GLADA-------FRKEEA-NNGIRVSTVSPGPTNTPMLQGL---MDSQ--------GTNFRPEIYIEPKEIANAIRFVID  215 (245)
T ss_dssp             HHHHH-------HHHHHG-GGTCEEEEEEECCC---------------------------CCGGGSCHHHHHHHHHHHHT
T ss_pred             HHHHH-------HHHHhh-hcCeEEEEEecCCccCchhhhh---hhhh--------hcccccccCCCHHHHHHHHHHHHc
Confidence            22210       111111 2389999999999988743211   0000        011112357899999999999998


Q ss_pred             CCCCCceEEee
Q 017977          279 NPSYRGVINGT  289 (363)
Q Consensus       279 ~~~~~g~~~i~  289 (363)
                      .+...+++++.
T Consensus       216 ~~~~~~~~~i~  226 (245)
T 3e9n_A          216 AGETTQITNVD  226 (245)
T ss_dssp             SCTTEEEEEEE
T ss_pred             CCCccceeeeE
Confidence            87766677775

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.79  E-value=1.2e-18  Score=153.53  Aligned_cols=221  Identities=13%  Similarity=0.076  Sum_probs=141.4

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEe-CCCCcccccC-----CCCCccccCcccccCcc-------------
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLT-RSRSKAELIF-----PGKKTRFFPGVMIAEEP-------------  108 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~-----~~~~~~~~~~~d~~~~~-------------  108 (363)
                      ..+++++||||+|+||+++++.|+++|++|++++ |+........     ..........+|+.|.+             
T Consensus         7 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   86 (291)
T 1e7w_A            7 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPV   86 (291)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCB
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCccccccccccccccc
Confidence            3457899999999999999999999999999999 8765432211     01112224568999988             


Q ss_pred             ----hHHhhcc-------CCCEEEEccCCCCCCC---CC--------------hhhHHHHHHHHHHHHHHHHHHHHhC--
Q 017977          109 ----QWRDCIQ-------GSTAVVNLAGTPIGTR---WS--------------SEIKKEIKESRIRVTSKVVDLINES--  158 (363)
Q Consensus       109 ----~~~~~~~-------~~d~Vi~~a~~~~~~~---~~--------------~~~~~~~~~~n~~~~~~l~~~~~~~--  158 (363)
                          ++.++++       .+|++||+||......   ..              .+..+..+++|+.++.++++++.+.  
T Consensus        87 ~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~  166 (291)
T 1e7w_A           87 TLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVA  166 (291)
T ss_dssp             CHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence                7777665       7899999999753322   23              5556788999999999999888743  


Q ss_pred             CCC------CCCeEEEeccceecCCcccccccCCCcchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEE
Q 017977          159 PEG------VRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVL  232 (363)
Q Consensus       159 ~~~------~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~  232 (363)
                      ..+      ..++|++||..+..+       .+....|..+|.+...+.++       ....+. ..|+.++.++||.+.
T Consensus       167 ~~~~~~~~~~g~Iv~isS~~~~~~-------~~~~~~Y~asKaa~~~l~~~-------la~e~~-~~gI~vn~v~PG~v~  231 (291)
T 1e7w_A          167 GTPAKHRGTNYSIINMVDAMTNQP-------LLGYTIYTMAKGALEGLTRS-------AALELA-PLQIRVNGVGPGLSV  231 (291)
T ss_dssp             TSCGGGSCSCEEEEEECCTTTTSC-------CTTCHHHHHHHHHHHHHHHH-------HHHHHG-GGTEEEEEEEESSBC
T ss_pred             hcCCCCCCCCcEEEEEechhhcCC-------CCCCchhHHHHHHHHHHHHH-------HHHHHH-hcCeEEEEEeeCCcc
Confidence            133      467999999843221       22334555554333222211       111111 238999999999987


Q ss_pred             eCCCCcccchHHHHH-HHhCCCCCCCCCccccccHHHHHHHHHHHhcCCC--CCc-eEEeeCCC
Q 017977          233 GKDGGALAKMIPLFM-MFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       233 g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      .+. . ..  -.... .....+++     ..+..++|+|++++.++....  ..| .+++.+|.
T Consensus       232 T~~-~-~~--~~~~~~~~~~~p~~-----~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~  286 (291)
T 1e7w_A          232 LVD-D-MP--PAVWEGHRSKVPLY-----QRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGY  286 (291)
T ss_dssp             CGG-G-SC--HHHHHHHHTTCTTT-----TSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             CCc-c-CC--HHHHHHHHhhCCCC-----CCCCCHHHHHHHHHHHhCCcccCccCcEEEECCCc
Confidence            664 2 11  11111 11222221     036789999999999997433  345 77777664

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.79  E-value=5e-19  Score=153.62  Aligned_cols=226  Identities=8%  Similarity=0.014  Sum_probs=140.5

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCccc-------ccCCCCCccccCcccccCcchHHhhcc-----
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE-------LIFPGKKTRFFPGVMIAEEPQWRDCIQ-----  115 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-------~~~~~~~~~~~~~~d~~~~~~~~~~~~-----  115 (363)
                      ..+++++||||+|+||++++++|+++|++|++++|.....+       .+...........+|+.|.+++.++++     
T Consensus         9 l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   88 (262)
T 3ksu_A            9 LKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKE   88 (262)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            34578999999999999999999999999999988653311       111112222345689999998887765     


Q ss_pred             --CCCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcch
Q 017977          116 --GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDY  190 (363)
Q Consensus       116 --~~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~  190 (363)
                        ++|++||+||.....   ..+.+..+..+++|+.++.++++++.+...+..++|++||..+..+       .+....|
T Consensus        89 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~-------~~~~~~Y  161 (262)
T 3ksu_A           89 FGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAY-------TGFYSTY  161 (262)
T ss_dssp             HCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHH-------HCCCCC-
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccC-------CCCCchh
Confidence              689999999975432   2355667889999999999999999884113457999999843222       2233456


Q ss_pred             hhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHH
Q 017977          191 CAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIV  270 (363)
Q Consensus       191 ~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  270 (363)
                      ..+|.+...+.++       ....+. ..|+++..++||.+..+....... ......     .........+..++|+|
T Consensus       162 ~asKaa~~~l~~~-------la~e~~-~~gi~vn~v~PG~v~T~~~~~~~~-~~~~~~-----~~~~~~~~r~~~pedvA  227 (262)
T 3ksu_A          162 AGNKAPVEHYTRA-------ASKELM-KQQISVNAIAPGPMDTSFFYGQET-KESTAF-----HKSQAMGNQLTKIEDIA  227 (262)
T ss_dssp             ----CHHHHHHHH-------HHHHTT-TTTCEEEEEEECCCCTHHHHTCC------------------CCCCSCCGGGTH
T ss_pred             HHHHHHHHHHHHH-------HHHHHH-HcCcEEEEEeeCCCcCccccccCc-hHHHHH-----HHhcCcccCCCCHHHHH
Confidence            6554333222211       111111 238999999999986542100000 000000     01111122468899999


Q ss_pred             HHHHHHhcCCC-CCc-eEEeeCCCCc
Q 017977          271 NLIYEALSNPS-YRG-VINGTAPNPV  294 (363)
Q Consensus       271 ~a~~~~~~~~~-~~g-~~~i~~~~~~  294 (363)
                      ++++.++.... ..| .+++.+|...
T Consensus       228 ~~v~~L~s~~~~itG~~i~vdGg~~~  253 (262)
T 3ksu_A          228 PIIKFLTTDGWWINGQTIFANGGYTT  253 (262)
T ss_dssp             HHHHHHHTTTTTCCSCEEEESTTCCC
T ss_pred             HHHHHHcCCCCCccCCEEEECCCccC
Confidence            99999997632 345 7777776533

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=99.79  E-value=4.6e-19  Score=151.54  Aligned_cols=221  Identities=12%  Similarity=0.043  Sum_probs=148.8

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCccccc----CCCCCccccCcccccCcchHHhhcc-------C
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (363)
                      ..+|+++||||++.||+++++.|+++|++|.+.+|+.+..++.    ...........+|+.|.++++++++       +
T Consensus         7 L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~   86 (255)
T 4g81_D            7 LTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIH   86 (255)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCC
Confidence            3467999999999999999999999999999999987654322    2222233355689999988877664       5


Q ss_pred             CCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC---CCCCCCeEEEeccceecCCcccccccCCCcch
Q 017977          117 STAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES---PEGVRPSVLELVKPKYLMRAAHQEMITWLSDY  190 (363)
Q Consensus       117 ~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~  190 (363)
                      +|++||+||.....   ..+.+.++..+++|+.++..+.+++.+.   +.+..++|++||..+..+       .+....|
T Consensus        87 iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~-------~~~~~~Y  159 (255)
T 4g81_D           87 VDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAA-------RPTVAPY  159 (255)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSB-------CTTCHHH
T ss_pred             CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCC-------CCCchhH
Confidence            89999999975442   3466788999999999998888776542   134467999999854222       3344567


Q ss_pred             hhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc---cchHHHHHHHhCCCCCCCCCccccccHH
Q 017977          191 CAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL---AKMIPLFMMFAGGPLGSGQQWFSWIHLD  267 (363)
Q Consensus       191 ~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~v~  267 (363)
                      ..+|.+...++++       ....+. .+|+++..|.||.+..+.....   ..+..  ......|++      .+..++
T Consensus       160 ~asKaal~~ltr~-------lA~ela-~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~--~~~~~~Pl~------R~g~pe  223 (255)
T 4g81_D          160 TAAKGGIKMLTCS-------MAAEWA-QFNIQTNAIGPGYILTDMNTALIEDKQFDS--WVKSSTPSQ------RWGRPE  223 (255)
T ss_dssp             HHHHHHHHHHHHH-------HHHHHG-GGTEEEEEEEECSBCCGGGHHHHTCHHHHH--HHHHHSTTC------SCBCGG
T ss_pred             HHHHHHHHHHHHH-------HHHHhc-ccCeEEEEEeeCCCCCchhhcccCCHHHHH--HHHhCCCCC------CCcCHH
Confidence            7776554444332       111112 2389999999999987632110   01111  112223332      256789


Q ss_pred             HHHHHHHHHhcCCC--CCc-eEEeeCC
Q 017977          268 DIVNLIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       268 D~a~a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      |+|++++.++....  ..| .+.+.+|
T Consensus       224 diA~~v~fL~S~~a~~iTG~~i~VDGG  250 (255)
T 4g81_D          224 ELIGTAIFLSSKASDYINGQIIYVDGG  250 (255)
T ss_dssp             GGHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHHhCchhCCCcCCEEEECCC
Confidence            99999999986543  445 7777665

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.79  E-value=1.9e-19  Score=155.16  Aligned_cols=203  Identities=16%  Similarity=0.093  Sum_probs=133.3

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCC-------CCCccccCcccccCcchHHhhcc------
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP-------GKKTRFFPGVMIAEEPQWRDCIQ------  115 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~------  115 (363)
                      .+++++||||+|+||++++++|+++|++|++++|+..+.+....       .........+|+.|.+++.++++      
T Consensus         6 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   85 (250)
T 3nyw_A            6 QKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKY   85 (250)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHhc
Confidence            45689999999999999999999999999999998765433211       10112245689999888877664      


Q ss_pred             -CCCEEEEccCCCCCCC--CChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcch
Q 017977          116 -GSTAVVNLAGTPIGTR--WSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDY  190 (363)
Q Consensus       116 -~~d~Vi~~a~~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~  190 (363)
                       ++|+|||+||......  .+.+..+..+++|+.++.++++++.+.  ..+..++|++||.++.++       .++...|
T Consensus        86 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-------~~~~~~Y  158 (250)
T 3nyw_A           86 GAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYG-------FADGGIY  158 (250)
T ss_dssp             CCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC--------------CCTTHH
T ss_pred             CCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCC-------CCCCcch
Confidence             6899999999754322  234556788999999999998887432  134567999999855443       1223456


Q ss_pred             hhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHH
Q 017977          191 CAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIV  270 (363)
Q Consensus       191 ~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  270 (363)
                      ..+|.+...+.++       ....+. ..|+++..++||.+..+..       .   .. ..    ......+++++|+|
T Consensus       159 ~asKaa~~~l~~~-------la~e~~-~~gi~vn~v~PG~v~T~~~-------~---~~-~~----~~~~~~~~~p~dva  215 (250)
T 3nyw_A          159 GSTKFALLGLAES-------LYRELA-PLGIRVTTLCPGWVNTDMA-------K---KA-GT----PFKDEEMIQPDDLL  215 (250)
T ss_dssp             HHHHHHHHHHHHH-------HHHHHG-GGTEEEEEEEESSBCSHHH-------H---HT-TC----CSCGGGSBCHHHHH
T ss_pred             HHHHHHHHHHHHH-------HHHHhh-hcCcEEEEEecCcccCchh-------h---hc-CC----CcccccCCCHHHHH
Confidence            6654333322221       111111 2389999999998865411       0   00 01    11223478999999


Q ss_pred             HHHHHHhcCCC
Q 017977          271 NLIYEALSNPS  281 (363)
Q Consensus       271 ~a~~~~~~~~~  281 (363)
                      ++++.++..+.
T Consensus       216 ~~v~~l~s~~~  226 (250)
T 3nyw_A          216 NTIRCLLNLSE  226 (250)
T ss_dssp             HHHHHHHTSCT
T ss_pred             HHHHHHHcCCC
Confidence            99999998665

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.79  E-value=2.5e-18  Score=151.38  Aligned_cols=220  Identities=15%  Similarity=0.056  Sum_probs=140.3

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCC-CcccccC-----CCCCccccCcccccC----cchHHhhcc---
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR-SKAELIF-----PGKKTRFFPGVMIAE----EPQWRDCIQ---  115 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~-----~~~~~~~~~~~d~~~----~~~~~~~~~---  115 (363)
                      .+++++||||+|+||+++++.|+++|++|++++|+. .......     ..........+|+.|    .+++.++++   
T Consensus        22 ~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~  101 (288)
T 2x9g_A           22 EAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSCF  101 (288)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHHH
Confidence            346899999999999999999999999999999987 4332211     011112245689999    777776654   


Q ss_pred             ----CCCEEEEccCCCCCCC-------------CChhhHHHHHHHHHHHHHHHHHHHHhC-C-CC------CCCeEEEec
Q 017977          116 ----GSTAVVNLAGTPIGTR-------------WSSEIKKEIKESRIRVTSKVVDLINES-P-EG------VRPSVLELV  170 (363)
Q Consensus       116 ----~~d~Vi~~a~~~~~~~-------------~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~~------~~~~v~~SS  170 (363)
                          ++|+|||+||......             ...+..+..+++|+.++.++++++.+. . .+      ..++|++||
T Consensus       102 ~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS  181 (288)
T 2x9g_A          102 RAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCD  181 (288)
T ss_dssp             HHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEEECC
T ss_pred             HhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEEec
Confidence                7899999999753322             233456778999999999999988753 1 12      457999999


Q ss_pred             cceecCCcccccccCCCcchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHh
Q 017977          171 KPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFA  250 (363)
Q Consensus       171 ~~~~yg~~~~~e~~~~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~  250 (363)
                      .++..+       .+....|..+|.+...+.+      . ....+. ..|+++++++||.+.++. ........  ....
T Consensus       182 ~~~~~~-------~~~~~~Y~asKaa~~~l~~------~-la~e~~-~~gI~vn~v~PG~v~t~~-~~~~~~~~--~~~~  243 (288)
T 2x9g_A          182 AMVDQP-------CMAFSLYNMGKHALVGLTQ------S-AALELA-PYGIRVNGVAPGVSLLPV-AMGEEEKD--KWRR  243 (288)
T ss_dssp             TTTTSC-------CTTCHHHHHHHHHHHHHHH------H-HHHHHG-GGTEEEEEEEESSCSCCT-TSCHHHHH--HHHH
T ss_pred             ccccCC-------CCCCchHHHHHHHHHHHHH------H-HHHHhh-ccCeEEEEEEeccccCcc-ccChHHHH--HHHh
Confidence            843211       2233345555433222221      1 111111 238999999999999886 21111111  1122


Q ss_pred             CCCCCCCCCcccc-ccHHHHHHHHHHHhcCCC--CCc-eEEeeCCC
Q 017977          251 GGPLGSGQQWFSW-IHLDDIVNLIYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       251 ~~~~~~~~~~~~~-i~v~D~a~a~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      ..+++      .+ ..++|+|++++.++....  ..| .+++.+|.
T Consensus       244 ~~p~~------r~~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~  283 (288)
T 2x9g_A          244 KVPLG------RREASAEQIADAVIFLVSGSAQYITGSIIKVDGGL  283 (288)
T ss_dssp             TCTTT------SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             hCCCC------CCCCCHHHHHHHHHHHhCccccCccCCEEEECcch
Confidence            22322      24 789999999999997532  345 67776663

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.78  E-value=2.3e-18  Score=148.14  Aligned_cols=216  Identities=14%  Similarity=0.063  Sum_probs=135.2

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCC-CCccccCcccccCcchHHhhcc-------CCCEEEE
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTAVVN  122 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~d~Vi~  122 (363)
                      |+++||||+|+||+++++.|+++|++|++++|+....+..... ........+|+.|.+++.++++       ++|+|||
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvn   80 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVN   80 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence            4799999999999999999999999999999987554332111 0112244689999998887765       6899999


Q ss_pred             ccCCCC-C---CCCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhhhhh
Q 017977          123 LAGTPI-G---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYC  196 (363)
Q Consensus       123 ~a~~~~-~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~  196 (363)
                      +||... .   ...+.+..+..+++|+.++.++++++.+.  ..+..++|++||.++..+       .+....|..+|. 
T Consensus        81 nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~-------~~~~~~Y~asKa-  152 (248)
T 3asu_A           81 NAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWP-------YAGGNVYGATKA-  152 (248)
T ss_dssp             CCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSC-------CTTCHHHHHHHH-
T ss_pred             CCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccC-------CCCCchHHHHHH-
Confidence            999742 1   23455677889999999999888887632  135678999999843221       222334555433 


Q ss_pred             cccchhhHHHHHHHHHHHh-c-cCCCceEEEEeeceEEe-CCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHH
Q 017977          197 LVSFNRGVLVCREWEGTAL-K-VNKDVRLALIRIGIVLG-KDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLI  273 (363)
Q Consensus       197 ~~~y~~~k~~~~~~~~~~~-~-~~~~~~~~ilRp~~v~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~  273 (363)
                               ....+..... + ...|+++++++||.+.| +....  ..........  ...   ....+++++|+|+++
T Consensus       153 ---------a~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~--~~~~~~~~~~--~~~---~~~~~~~p~dvA~~v  216 (248)
T 3asu_A          153 ---------FVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNV--RFKGDDGKAE--KTY---QNTVALTPEDVSEAV  216 (248)
T ss_dssp             ---------HHHHHHHHHHHHTTTSCCEEEEEEECSBCC-----------------------------CCBCHHHHHHHH
T ss_pred             ---------HHHHHHHHHHHHhhhcCcEEEEEeccccccCcchhh--cccCchHHHH--HHH---hccCCCCHHHHHHHH
Confidence                     2222222111 1 12389999999999984 43211  0000000000  000   011347899999999


Q ss_pred             HHHhcCCC-CCc-eEEeeC
Q 017977          274 YEALSNPS-YRG-VINGTA  290 (363)
Q Consensus       274 ~~~~~~~~-~~g-~~~i~~  290 (363)
                      +.++..+. ..| .+.+..
T Consensus       217 ~~l~s~~~~~~g~~i~v~~  235 (248)
T 3asu_A          217 WWVSTLPAHVNINTLEMMP  235 (248)
T ss_dssp             HHHHHSCTTCCCCEEEECC
T ss_pred             HHHhcCCccceeeEEEEcc
Confidence            99998654 333 555544

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.78  E-value=4.7e-19  Score=154.76  Aligned_cols=200  Identities=12%  Similarity=0.024  Sum_probs=132.3

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCC----CCCccccCcccccCcchHHhhcc-------C
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (363)
                      ..+++|+||||+|+||++++++|+++|++|++++|+....+....    .........+|+.|.+++.++++       +
T Consensus        29 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  108 (272)
T 1yb1_A           29 VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGD  108 (272)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCC
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCC
Confidence            445799999999999999999999999999999998755332211    11112245689999888877664       6


Q ss_pred             CCEEEEccCCCCCCCC---ChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchh
Q 017977          117 STAVVNLAGTPIGTRW---SSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYC  191 (363)
Q Consensus       117 ~d~Vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~  191 (363)
                      +|+|||+||.......   ..+..+..+++|+.++.++++++.+.  ..+..++|++||..+..+       .+....|.
T Consensus       109 iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-------~~~~~~Y~  181 (272)
T 1yb1_A          109 VSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVS-------VPFLLAYC  181 (272)
T ss_dssp             CSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCC-------HHHHHHHH
T ss_pred             CcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCC-------CCCchhHH
Confidence            8999999997533222   23455678999999987777766431  146678999999843221       11122344


Q ss_pred             hhhhhcccchhhHHHHHHHHHHHhcc-----CCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccH
Q 017977          192 AKVYCLVSFNRGVLVCREWEGTALKV-----NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHL  266 (363)
Q Consensus       192 ~~~~~~~~y~~~k~~~~~~~~~~~~~-----~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  266 (363)
                      .          +|.....+.......     ..|+++++++|+.+.++....  ...               ....++++
T Consensus       182 ~----------sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~--~~~---------------~~~~~~~~  234 (272)
T 1yb1_A          182 S----------SKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN--PST---------------SLGPTLEP  234 (272)
T ss_dssp             H----------HHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC--THH---------------HHCCCCCH
T ss_pred             H----------HHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCcccc--ccc---------------cccCCCCH
Confidence            3          343322222211111     348999999999998774221  000               01247899


Q ss_pred             HHHHHHHHHHhcCCC
Q 017977          267 DDIVNLIYEALSNPS  281 (363)
Q Consensus       267 ~D~a~a~~~~~~~~~  281 (363)
                      +|+|++++.++..+.
T Consensus       235 ~dva~~i~~~~~~~~  249 (272)
T 1yb1_A          235 EEVVNRLMHGILTEQ  249 (272)
T ss_dssp             HHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHcCC
Confidence            999999999998754

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=99.78  E-value=2.9e-18  Score=147.20  Aligned_cols=225  Identities=18%  Similarity=0.120  Sum_probs=149.6

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccc---cCCCCCccccCcccccCcchHHhhcc-------CC
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL---IFPGKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (363)
                      ...|+++||||++.||+++++.|+++|.+|++++|+.+....   +...........+|+.|.++++++++       ++
T Consensus         5 L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~i   84 (258)
T 4gkb_A            5 LQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFGRL   84 (258)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            345799999999999999999999999999999998765322   11112223355689999988776654       68


Q ss_pred             CEEEEccCCCCC--CCCChhhHHHHHHHHHHHHHHHHHHHHhC-CCCCCCeEEEeccceecCCcccccccCCCcchhhhh
Q 017977          118 TAVVNLAGTPIG--TRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKV  194 (363)
Q Consensus       118 d~Vi~~a~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~  194 (363)
                      |++||+||....  .....+..+..+++|+.++..+.+++.+. +.+..++|++||..+..+       .+....|..+|
T Consensus        85 DiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~-------~~~~~~Y~asK  157 (258)
T 4gkb_A           85 DGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTAVTG-------QGNTSGYCASK  157 (258)
T ss_dssp             CEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHHHHC-------CSSCHHHHHHH
T ss_pred             CEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhhccC-------CCCchHHHHHH
Confidence            999999997433  23456678889999999998888877653 123357999999865333       34445677776


Q ss_pred             hhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccc----hHHHH-HHHhCCCCCCCCCccccccHHHH
Q 017977          195 YCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAK----MIPLF-MMFAGGPLGSGQQWFSWIHLDDI  269 (363)
Q Consensus       195 ~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~i~v~D~  269 (363)
                      .+...++++  ++.     .+. .+|+++..|.||.|..+.......    .-... ......|++     ..+..++|+
T Consensus       158 aav~~ltr~--lA~-----ela-~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plg-----~R~g~peei  224 (258)
T 4gkb_A          158 GAQLALTRE--WAV-----ALR-EHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPLG-----RRFTTPDEI  224 (258)
T ss_dssp             HHHHHHHHH--HHH-----HHG-GGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTTT-----TSCBCHHHH
T ss_pred             HHHHHHHHH--HHH-----Hhc-ccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCCC-----CCCcCHHHH
Confidence            555444432  111     111 238999999999998764321100    00011 222233332     136779999


Q ss_pred             HHHHHHHhcCCC--CCc-eEEeeCCC
Q 017977          270 VNLIYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       270 a~a~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      |++++.++....  ..| .+.+.+|.
T Consensus       225 A~~v~fLaS~~a~~iTG~~i~VDGG~  250 (258)
T 4gkb_A          225 ADTAVFLLSPRASHTTGEWLFVDGGY  250 (258)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHHHHHhCchhcCccCCeEEECCCc
Confidence            999999987544  345 77777763

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=99.78  E-value=1e-18  Score=150.78  Aligned_cols=223  Identities=17%  Similarity=0.059  Sum_probs=148.3

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCC-CCccccCcccccCcchHHhhcc-------CCCE
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTA  119 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~d~  119 (363)
                      .+.|.++||||++.||+++++.|+++|++|++++|+.+..+..... ........+|+.|.++++++++       ++|+
T Consensus        27 L~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi  106 (273)
T 4fgs_A           27 LNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRIDV  106 (273)
T ss_dssp             TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEE
T ss_pred             hCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4567899999999999999999999999999999988665433211 1222345689999988877664       5799


Q ss_pred             EEEccCCCCC---CCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhhhhhh
Q 017977          120 VVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYC  196 (363)
Q Consensus       120 Vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~  196 (363)
                      +||+||....   ...+.+.++..+++|+.++..+.+++.+.-....++|++||..+..+       .+....|..+|.+
T Consensus       107 LVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~-------~~~~~~Y~asKaa  179 (273)
T 4fgs_A          107 LFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTG-------TPAFSVYAASKAA  179 (273)
T ss_dssp             EEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSC-------CTTCHHHHHHHHH
T ss_pred             EEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccC-------CCCchHHHHHHHH
Confidence            9999997544   23466788999999999999999999876222346999998854332       3344567766544


Q ss_pred             cccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCccc--c---hHHHH-HHHhCCCCCCCCCccccccHHHHH
Q 017977          197 LVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALA--K---MIPLF-MMFAGGPLGSGQQWFSWIHLDDIV  270 (363)
Q Consensus       197 ~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~--~---~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a  270 (363)
                      ...++++       ....+. .+|+++..|.||.+..+......  .   ..... ......|++      .+..++|+|
T Consensus       180 v~~ltr~-------lA~Ela-~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~Plg------R~g~peeiA  245 (273)
T 4fgs_A          180 LRSFARN-------WILDLK-DRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMG------RVGRAEEVA  245 (273)
T ss_dssp             HHHHHHH-------HHHHTT-TSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTTS------SCBCHHHHH
T ss_pred             HHHHHHH-------HHHHhc-ccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCC------CCcCHHHHH
Confidence            4333321       111111 24899999999999776421110  0   00111 122233433      256799999


Q ss_pred             HHHHHHhcCCC--CCc-eEEeeCC
Q 017977          271 NLIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       271 ~a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      ++++.++....  ..| .+.+.+|
T Consensus       246 ~~v~FLaSd~a~~iTG~~i~VDGG  269 (273)
T 4fgs_A          246 AAALFLASDDSSFVTGAELFVDGG  269 (273)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHhCchhcCccCCeEeECcC
Confidence            99999997544  345 7777665

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.77  E-value=1.6e-18  Score=149.69  Aligned_cols=217  Identities=14%  Similarity=0.095  Sum_probs=139.7

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCC--CEEEEEeCCCCcccccCCC-CCccccCcccccCcchHHhhcc-------CCCE
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTA  119 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~d~  119 (363)
                      +++++||||+|+||++++++|+++|  +.|++++|+....+.+... ........+|+.|.+++.++++       ++|+
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   81 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDS   81 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCccE
Confidence            3689999999999999999999985  7999999987654432211 1112245689999988887765       6899


Q ss_pred             EEEccCCCCC----CCCChhhHHHHHHHHHHHHHHHHHHHHhC-C-CCCCCeEEEeccceecCCcccccccCCCcchhhh
Q 017977          120 VVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES-P-EGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAK  193 (363)
Q Consensus       120 Vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~  193 (363)
                      +||+||....    ...+.+..+..+++|+.++.++++++.+. . .+ .++|++||..+..+       .+....|..+
T Consensus        82 lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~~~~-------~~~~~~Y~as  153 (254)
T 3kzv_A           82 LVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDACNMY-------FSSWGAYGSS  153 (254)
T ss_dssp             EEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCCCCS-------SCCSHHHHHH
T ss_pred             EEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchhccC-------CCCcchHHHH
Confidence            9999997322    23456677889999999999999988432 0 33 67999999844222       2333455555


Q ss_pred             hhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc----------cchHHHHHHHhCCCCCCCCCcccc
Q 017977          194 VYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL----------AKMIPLFMMFAGGPLGSGQQWFSW  263 (363)
Q Consensus       194 ~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~  263 (363)
                      |.+...+          .........++++..++||.+.++.....          ......+.  ...+.      ..+
T Consensus       154 K~a~~~~----------~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~------~r~  215 (254)
T 3kzv_A          154 KAALNHF----------AMTLANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFR--GLKEN------NQL  215 (254)
T ss_dssp             HHHHHHH----------HHHHHHHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHH--HHHTT------C--
T ss_pred             HHHHHHH----------HHHHHhhccCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHH--HHHhc------CCc
Confidence            4332222          22111111489999999999988743221          11111111  11111      237


Q ss_pred             ccHHHHHHHHHHHhcCCC---CCc-eEEeeCCC
Q 017977          264 IHLDDIVNLIYEALSNPS---YRG-VINGTAPN  292 (363)
Q Consensus       264 i~v~D~a~a~~~~~~~~~---~~g-~~~i~~~~  292 (363)
                      .+++|+|++++.++....   ..| .+++.+++
T Consensus       216 ~~p~dva~~v~~L~s~~~~~~itG~~i~vdg~~  248 (254)
T 3kzv_A          216 LDSSVPATVYAKLALHGIPDGVNGQYLSYNDPA  248 (254)
T ss_dssp             --CHHHHHHHHHHHHHCCCGGGTTCEEETTCGG
T ss_pred             CCcccHHHHHHHHHhhcccCCCCccEEEecCcc
Confidence            889999999999987652   445 66666654

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.77  E-value=8.4e-18  Score=147.70  Aligned_cols=206  Identities=12%  Similarity=0.017  Sum_probs=135.2

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccC-----------CCCCccccCcccccCcchHHhhcc--
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF-----------PGKKTRFFPGVMIAEEPQWRDCIQ--  115 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----------~~~~~~~~~~~d~~~~~~~~~~~~--  115 (363)
                      .+++++||||+|+||++++++|+++|++|++++|+..+.+.+.           ..........+|+.|.+++.++++  
T Consensus         8 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   87 (285)
T 3sc4_A            8 RGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAKT   87 (285)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence            4578999999999999999999999999999999987533221           111122245679999988877765  


Q ss_pred             -----CCCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccC
Q 017977          116 -----GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMIT  185 (363)
Q Consensus       116 -----~~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~  185 (363)
                           ++|++||+||.....   ..+.+..+..+++|+.++.++++++.+.  ..+..++|++||..+..+      ..+
T Consensus        88 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~------~~~  161 (285)
T 3sc4_A           88 VEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEP------KWL  161 (285)
T ss_dssp             HHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSG------GGS
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccC------CCC
Confidence                 789999999975432   3355667889999999999999999874  224567999999843221      012


Q ss_pred             CCcchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCcccccc
Q 017977          186 WLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIH  265 (363)
Q Consensus       186 ~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  265 (363)
                      ....|..+|.+...+.+       .....+. ..|+++..++||.+...      .+.... .....+      ...+..
T Consensus       162 ~~~~Y~asKaal~~~~~-------~la~e~~-~~gI~vn~v~PG~~v~t------~~~~~~-~~~~~~------~~r~~~  220 (285)
T 3sc4_A          162 RPTPYMMAKYGMTLCAL-------GIAEELR-DAGIASNTLWPRTTVAT------AAVQNL-LGGDEA------MARSRK  220 (285)
T ss_dssp             CSHHHHHHHHHHHHHHH-------HHHHHTG-GGTCEEEEEECSSCBCC------HHHHHH-HTSCCC------CTTCBC
T ss_pred             CCchHHHHHHHHHHHHH-------HHHHHhc-ccCcEEEEEeCCCcccc------HHHHhh-cccccc------ccCCCC
Confidence            22345555433222221       1111111 23899999999843321      111111 011111      123678


Q ss_pred             HHHHHHHHHHHhcCCC
Q 017977          266 LDDIVNLIYEALSNPS  281 (363)
Q Consensus       266 v~D~a~a~~~~~~~~~  281 (363)
                      ++|+|++++.++..+.
T Consensus       221 pedvA~~~~~l~s~~~  236 (285)
T 3sc4_A          221 PEVYADAAYVVLNKPS  236 (285)
T ss_dssp             THHHHHHHHHHHTSCT
T ss_pred             HHHHHHHHHHHhCCcc
Confidence            9999999999998764

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.77  E-value=3.2e-18  Score=149.20  Aligned_cols=217  Identities=12%  Similarity=0.054  Sum_probs=133.8

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCC---CCCccccCcccccCcchHHhhccC-------CCEE
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP---GKKTRFFPGVMIAEEPQWRDCIQG-------STAV  120 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~-------~d~V  120 (363)
                      ++++||||+|+||++++++|+++|++|++++|+....+....   .........+|+.|.+++.++++.       +|+|
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  101 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGL  101 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSCCEE
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            689999999999999999999999999999998755433211   001122456899999988877754       5999


Q ss_pred             EEccCCCCC----CCCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCC-CeEEEeccceecCCcccccccCCCcchhhh
Q 017977          121 VNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVR-PSVLELVKPKYLMRAAHQEMITWLSDYCAK  193 (363)
Q Consensus       121 i~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~-~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~  193 (363)
                      ||+||....    .....+..+..+++|+.++.++++++.+.  ..+.. ++|++||..+..+       .+....|..+
T Consensus       102 vnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~-------~~~~~~Y~as  174 (272)
T 2nwq_A          102 INNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWP-------YPGSHVYGGT  174 (272)
T ss_dssp             EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSC-------CTTCHHHHHH
T ss_pred             EECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccC-------CCCCchHHHH
Confidence            999997432    12345677889999999988877776532  13455 8999999843221       1222344444


Q ss_pred             hhhcccchhhHHHHHHHHHHHhcc--CCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHH
Q 017977          194 VYCLVSFNRGVLVCREWEGTALKV--NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVN  271 (363)
Q Consensus       194 ~~~~~~y~~~k~~~~~~~~~~~~~--~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  271 (363)
                                |.....+.......  ..|+++++++||.+.++.....  .........  ...   ....++.++|+|+
T Consensus       175 ----------Kaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~--~~~~~~~~~--~~~---~~~~~~~pedvA~  237 (272)
T 2nwq_A          175 ----------KAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVR--FGGDQARYD--KTY---AGAHPIQPEDIAE  237 (272)
T ss_dssp             ----------HHHHHHHHHHHHTTCTTSCCEEEEEEECSBC---------------------------CCCCBCHHHHHH
T ss_pred             ----------HHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcc--cccchHHHH--Hhh---ccCCCCCHHHHHH
Confidence                      43333222222211  2389999999999987742110  000000000  000   0112578999999


Q ss_pred             HHHHHhcCCC-CCc-eEEeeCC
Q 017977          272 LIYEALSNPS-YRG-VINGTAP  291 (363)
Q Consensus       272 a~~~~~~~~~-~~g-~~~i~~~  291 (363)
                      +++.++..+. ..| .+.+..+
T Consensus       238 ~v~~l~s~~~~~~g~~i~v~~~  259 (272)
T 2nwq_A          238 TIFWIMNQPAHLNINSLEIMPV  259 (272)
T ss_dssp             HHHHHHTSCTTEEEEEEEEEET
T ss_pred             HHHHHhCCCccCccceEEEeec
Confidence            9999998654 233 5555543

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.77  E-value=8.4e-18  Score=146.89  Aligned_cols=213  Identities=15%  Similarity=0.055  Sum_probs=136.1

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCC-----------CCccccCcccccCcchHHhhcc--
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----------KKTRFFPGVMIAEEPQWRDCIQ--  115 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----------~~~~~~~~~d~~~~~~~~~~~~--  115 (363)
                      .+++++||||+|+||+++++.|+++|++|++++|+..+.+.....           ........+|+.|.+++.++++  
T Consensus         5 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   84 (274)
T 3e03_A            5 SGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAAT   84 (274)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHH
Confidence            457899999999999999999999999999999998653332111           1112245689999988877664  


Q ss_pred             -----CCCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccC
Q 017977          116 -----GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMIT  185 (363)
Q Consensus       116 -----~~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~  185 (363)
                           ++|++||+||.....   ..+.+..+..+++|+.++.++++++.+.  ..+..++|++||..+..+.     ..+
T Consensus        85 ~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~-----~~~  159 (274)
T 3e03_A           85 VDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPA-----WWG  159 (274)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHH-----HHH
T ss_pred             HHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCC-----CCC
Confidence                 689999999975332   2355667889999999999999988653  2455679999998432110     011


Q ss_pred             CCcchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCcccccc
Q 017977          186 WLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIH  265 (363)
Q Consensus       186 ~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  265 (363)
                      ....|..+|.+...+.++       ....+. ..|+.+..++||.+......         ....+      .....+..
T Consensus       160 ~~~~Y~asKaal~~l~~~-------la~e~~-~~gI~vn~v~PG~~v~T~~~---------~~~~~------~~~~~~~~  216 (274)
T 3e03_A          160 AHTGYTLAKMGMSLVTLG-------LAAEFG-PQGVAINALWPRTVIATDAI---------NMLPG------VDAAACRR  216 (274)
T ss_dssp             HCHHHHHHHHHHHHHHHH-------HHHHHG-GGTCEEEEEECSBCBCC----------------C------CCGGGSBC
T ss_pred             CCchHHHHHHHHHHHHHH-------HHHHhh-hcCEEEEEEECCcccccchh---------hhccc------ccccccCC
Confidence            223454444332222211       111111 23899999999954432211         00111      11223678


Q ss_pred             HHHHHHHHHHHhcCCC--CCceEEee
Q 017977          266 LDDIVNLIYEALSNPS--YRGVINGT  289 (363)
Q Consensus       266 v~D~a~a~~~~~~~~~--~~g~~~i~  289 (363)
                      ++|+|++++.++....  ..|.+.+.
T Consensus       217 pedvA~~v~~l~s~~~~~itG~~i~~  242 (274)
T 3e03_A          217 PEIMADAAHAVLTREAAGFHGQFLID  242 (274)
T ss_dssp             THHHHHHHHHHHTSCCTTCCSCEEEH
T ss_pred             HHHHHHHHHHHhCccccccCCeEEEc
Confidence            9999999999997654  34544343

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.76  E-value=2e-17  Score=144.04  Aligned_cols=221  Identities=12%  Similarity=-0.015  Sum_probs=143.4

Q ss_pred             CccEEEEecCc--chHHHHHHHHHHhCCCEEEEEeCCCCcc-cc----cCC-CCCccccCcccccCcchHHhhcc-----
Q 017977           49 SQMTVSVTGAT--GFIGRRLVQRLQADNHQVRVLTRSRSKA-EL----IFP-GKKTRFFPGVMIAEEPQWRDCIQ-----  115 (363)
Q Consensus        49 ~~~~vlVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~----~~~-~~~~~~~~~~d~~~~~~~~~~~~-----  115 (363)
                      .+++|+||||+  |+||++++++|+++|++|++++|+..+. ..    +.. .........+|+.|.++++++++     
T Consensus        19 ~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   98 (267)
T 3gdg_A           19 KGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVAD   98 (267)
T ss_dssp             TTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHHH
Confidence            44789999999  9999999999999999999999987553 11    100 01122355689999988877664     


Q ss_pred             --CCCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCc
Q 017977          116 --GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLS  188 (363)
Q Consensus       116 --~~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~  188 (363)
                        .+|+|||+||.....   ..+.+..+..+++|+.++.++++++...  ..+..++|++||..+.++.     ..+...
T Consensus        99 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~~~~  173 (267)
T 3gdg_A           99 FGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIAN-----FPQEQT  173 (267)
T ss_dssp             TSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC-----SSSCCH
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccC-----CCCCCC
Confidence              579999999975432   2355667889999999999999988432  1355679999998543320     001233


Q ss_pred             chhhhhhhcccchhhHHHHHHHHHHHh-ccCCCceEEEEeeceEEeCCCCcccchHHHHH-HHhCCCCCCCCCccccccH
Q 017977          189 DYCAKVYCLVSFNRGVLVCREWEGTAL-KVNKDVRLALIRIGIVLGKDGGALAKMIPLFM-MFAGGPLGSGQQWFSWIHL  266 (363)
Q Consensus       189 ~~~~~~~~~~~y~~~k~~~~~~~~~~~-~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v  266 (363)
                      .|..+|.+.          ........ +....+.+..+.||.+..+.......  .... .....+      ...+.++
T Consensus       174 ~Y~~sK~a~----------~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~~------~~r~~~~  235 (267)
T 3gdg_A          174 SYNVAKAGC----------IHMARSLANEWRDFARVNSISPGYIDTGLSDFVPK--ETQQLWHSMIP------MGRDGLA  235 (267)
T ss_dssp             HHHHHHHHH----------HHHHHHHHHHTTTTCEEEEEEECCEECSCGGGSCH--HHHHHHHTTST------TSSCEET
T ss_pred             cchHHHHHH----------HHHHHHHHHHhccCcEEEEEECCccccchhhhCCH--HHHHHHHhcCC------CCCCcCH
Confidence            455554322          22211111 11124899999999998764322111  1111 112222      2347889


Q ss_pred             HHHHHHHHHHhcCCC--CCc-eEEeeCCC
Q 017977          267 DDIVNLIYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       267 ~D~a~a~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      +|+|++++.++....  ..| .+++.+|.
T Consensus       236 ~dva~~~~~l~s~~~~~itG~~i~vdgG~  264 (267)
T 3gdg_A          236 KELKGAYVYFASDASTYTTGADLLIDGGY  264 (267)
T ss_dssp             HHHHHHHHHHHSTTCTTCCSCEEEESTTG
T ss_pred             HHHHhHhheeecCccccccCCEEEECCce
Confidence            999999999997643  344 88887764

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=99.76  E-value=2.9e-17  Score=141.46  Aligned_cols=218  Identities=15%  Similarity=0.119  Sum_probs=142.7

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc-------CCCEE
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAV  120 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~V  120 (363)
                      .++|+++||||++.||+++++.|+++|++|++++|+..+...  +    .....+|+.+.+++..+++       ++|++
T Consensus         9 L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~--~----~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDil   82 (261)
T 4h15_A            9 LRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEGLP--E----ELFVEADLTTKEGCAIVAEATRQRLGGVDVI   82 (261)
T ss_dssp             CTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTTSC--T----TTEEECCTTSHHHHHHHHHHHHHHTSSCSEE
T ss_pred             CCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhCCC--c----EEEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            345799999999999999999999999999999997643211  1    1255689999888776654       68999


Q ss_pred             EEccCCCCC-----CCCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCC-Ccchhh
Q 017977          121 VNLAGTPIG-----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITW-LSDYCA  192 (363)
Q Consensus       121 i~~a~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~-~~~~~~  192 (363)
                      ||+||....     ...+.+..+..+++|+.++..+.+++.+.  ..+..++|++||..+..+       .+. ...|..
T Consensus        83 VnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~-------~~~~~~~Y~a  155 (261)
T 4h15_A           83 VHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLP-------LPESTTAYAA  155 (261)
T ss_dssp             EECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-------CTTTCHHHHH
T ss_pred             EECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccC-------CCCccHHHHH
Confidence            999986322     23456778889999999988887776643  145567999999854222       221 234666


Q ss_pred             hhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc------------cchHHHH-HHHhCCCCCCCCC
Q 017977          193 KVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL------------AKMIPLF-MMFAGGPLGSGQQ  259 (363)
Q Consensus       193 ~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~------------~~~~~~~-~~~~~~~~~~~~~  259 (363)
                      +|.+...++++       ....+. .+|+++..|.||.+-.+.....            ....... ......|++    
T Consensus       156 sKaal~~lt~~-------lA~Ela-~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Plg----  223 (261)
T 4h15_A          156 AKAALSTYSKA-------MSKEVS-PKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGIPLG----  223 (261)
T ss_dssp             HHHHHHHHHHH-------HHHHHG-GGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCTTS----
T ss_pred             HHHHHHHHHHH-------HHHHhh-hhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCCCCC----
Confidence            65544433321       111111 2389999999999876521100            0000111 112222332    


Q ss_pred             ccccccHHHHHHHHHHHhcCCC--CCc-eEEeeCCC
Q 017977          260 WFSWIHLDDIVNLIYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       260 ~~~~i~v~D~a~a~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                        .+..++|+|++++.++....  ..| .+.+.+|-
T Consensus       224 --R~g~peevA~~v~fLaS~~a~~itG~~i~VDGG~  257 (261)
T 4h15_A          224 --RPAKPEEVANLIAFLASDRAASITGAEYTIDGGT  257 (261)
T ss_dssp             --SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             --CCcCHHHHHHHHHHHhCchhcCccCcEEEECCcC
Confidence              26789999999999986543  345 77777663

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.76  E-value=1.7e-17  Score=143.28  Aligned_cols=223  Identities=10%  Similarity=-0.005  Sum_probs=145.5

Q ss_pred             CCccEEEEecCcc--hHHHHHHHHHHhCCCEEEEEeCCCCcccccC----C-CCCccccCcccccCcchHHhhcc-----
Q 017977           48 ASQMTVSVTGATG--FIGRRLVQRLQADNHQVRVLTRSRSKAELIF----P-GKKTRFFPGVMIAEEPQWRDCIQ-----  115 (363)
Q Consensus        48 ~~~~~vlVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~-~~~~~~~~~~d~~~~~~~~~~~~-----  115 (363)
                      ...|+++||||+|  .||+++++.|+++|++|++.+|+....+...    + .........+|+.|.+++.++++     
T Consensus         4 l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (256)
T 4fs3_A            4 LENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKD   83 (256)
T ss_dssp             CTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4567999999887  8999999999999999999999876543221    1 11122245689999988876654     


Q ss_pred             --CCCEEEEccCCCCCC-------CCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCC
Q 017977          116 --GSTAVVNLAGTPIGT-------RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITW  186 (363)
Q Consensus       116 --~~d~Vi~~a~~~~~~-------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~  186 (363)
                        ++|++||+||.....       ....+.....+++|+.+...+.+++........++|++||.++.++       .+.
T Consensus        84 ~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~-------~~~  156 (256)
T 4fs3_A           84 VGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFA-------VQN  156 (256)
T ss_dssp             HCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTSC-------CTT
T ss_pred             hCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccccC-------ccc
Confidence              689999999964321       2233445667889999998888888775333456999999865333       334


Q ss_pred             CcchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHH-HHHhCCCCCCCCCcccccc
Q 017977          187 LSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIH  265 (363)
Q Consensus       187 ~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~  265 (363)
                      ...|..+|.+...++++  ++.+     +. .+|+++..|.||.+..+........-... ......|++      .+..
T Consensus       157 ~~~Y~asKaal~~ltr~--lA~E-----la-~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~------R~g~  222 (256)
T 4fs3_A          157 YNVMGVAKASLEANVKY--LALD-----LG-PDNIRVNAISAGPIRTLSAKGVGGFNTILKEIKERAPLK------RNVD  222 (256)
T ss_dssp             THHHHHHHHHHHHHHHH--HHHH-----HG-GGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTS------SCCC
T ss_pred             chhhHHHHHHHHHHHHH--HHHH-----hC-ccCeEEEEEecCCCCChhhhhccCCHHHHHHHHhcCCCC------CCcC
Confidence            45677766554444332  1111     11 23899999999998776432211111111 122223333      2567


Q ss_pred             HHHHHHHHHHHhcCCC--CCc-eEEeeCC
Q 017977          266 LDDIVNLIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       266 v~D~a~a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      .+|+|++++.++....  ..| ++.+.+|
T Consensus       223 peevA~~v~fL~Sd~a~~iTG~~i~VDGG  251 (256)
T 4fs3_A          223 QVEVGKTAAYLLSDLSSGVTGENIHVDSG  251 (256)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHHHHhCchhcCccCCEEEECcC
Confidence            9999999999997543  345 6666665

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.76  E-value=2.4e-18  Score=148.16  Aligned_cols=204  Identities=12%  Similarity=0.042  Sum_probs=131.2

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCC----CC-CccccCcccc--cCcchHHhhcc-----
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GK-KTRFFPGVMI--AEEPQWRDCIQ-----  115 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~-~~~~~~~~d~--~~~~~~~~~~~-----  115 (363)
                      ..+++|+||||+|+||++++++|+++|++|++++|+..+.+....    .. .......+|+  .+.+++.++++     
T Consensus        12 l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~   91 (247)
T 3i1j_A           12 LKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHE   91 (247)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHh
Confidence            445799999999999999999999999999999998765433211    00 1111223344  77777666554     


Q ss_pred             --CCCEEEEccCCCCC----CCCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCC
Q 017977          116 --GSTAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWL  187 (363)
Q Consensus       116 --~~d~Vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~  187 (363)
                        ++|+|||+||....    ...+.+..+..+++|+.++.++++++.+.  ..+..++|++||..+.++       .+..
T Consensus        92 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-------~~~~  164 (247)
T 3i1j_A           92 FGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKG-------RANW  164 (247)
T ss_dssp             HSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSC-------CTTC
T ss_pred             CCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCC-------CCCc
Confidence              78999999997422    12355677889999999999999998532  145567999999854322       2233


Q ss_pred             cchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHH
Q 017977          188 SDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLD  267 (363)
Q Consensus       188 ~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  267 (363)
                      ..|..+|.+...+.+      . ....+....++++..++||.+..+.       ..  ....      ......+..++
T Consensus       165 ~~Y~~sK~a~~~~~~------~-la~e~~~~~~i~v~~v~PG~v~t~~-------~~--~~~~------~~~~~~~~~p~  222 (247)
T 3i1j_A          165 GAYGVSKFATEGLMQ------T-LADELEGVTAVRANSINPGATRTGM-------RA--QAYP------DENPLNNPAPE  222 (247)
T ss_dssp             HHHHHHHHHHHHHHH------H-HHHHHTTTSSEEEEEEECCCCSSHH-------HH--HHST------TSCGGGSCCGG
T ss_pred             chhHHHHHHHHHHHH------H-HHHHhcCCCCeEEEEEecCcccCcc-------ch--hccc------ccCccCCCCHH
Confidence            455555433222221      1 1111111148999999999876531       11  0000      11123467799


Q ss_pred             HHHHHHHHHhcCC
Q 017977          268 DIVNLIYEALSNP  280 (363)
Q Consensus       268 D~a~a~~~~~~~~  280 (363)
                      |+|++++.++...
T Consensus       223 dva~~~~~l~s~~  235 (247)
T 3i1j_A          223 DIMPVYLYLMGPD  235 (247)
T ss_dssp             GGTHHHHHHHSGG
T ss_pred             HHHHHHHHHhCch
Confidence            9999999998654

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.76  E-value=4e-17  Score=146.82  Aligned_cols=215  Identities=13%  Similarity=0.079  Sum_probs=140.3

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccC-----------CCCCccccCcccccCcchHHhhcc-
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF-----------PGKKTRFFPGVMIAEEPQWRDCIQ-  115 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----------~~~~~~~~~~~d~~~~~~~~~~~~-  115 (363)
                      ..+++||||||+|+||++++++|+++|++|++++|+..+...+.           ..........+|+.|.+++.++++ 
T Consensus        43 l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~  122 (346)
T 3kvo_A           43 LAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEK  122 (346)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHH
Confidence            34578999999999999999999999999999999987543221           111122244589999988887765 


Q ss_pred             ------CCCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCccccccc
Q 017977          116 ------GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMI  184 (363)
Q Consensus       116 ------~~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~  184 (363)
                            ++|+|||+||.....   ..+.+..+.++++|+.++.++++++...  ..+..++|++||..+..+     ...
T Consensus       123 ~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~-----~~~  197 (346)
T 3kvo_A          123 AIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNP-----VWF  197 (346)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCG-----GGT
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCC-----CCC
Confidence                  789999999975332   3345667889999999999999998643  245578999999843211     001


Q ss_pred             CCCcchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccc
Q 017977          185 TWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWI  264 (363)
Q Consensus       185 ~~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  264 (363)
                      +....|..+|.+...+.+       .....+.  .++.+..+.|+.++...      +..   ...+.     .....+.
T Consensus       198 ~~~~~Y~aSKaal~~l~~-------~la~e~~--~gIrvn~v~PG~~i~T~------~~~---~~~~~-----~~~~r~~  254 (346)
T 3kvo_A          198 KQHCAYTIAKYGMSMYVL-------GMAEEFK--GEIAVNALWPKTAIHTA------AMD---MLGGP-----GIESQCR  254 (346)
T ss_dssp             SSSHHHHHHHHHHHHHHH-------HHHHHTT--TTCEEEEEECSBCBCCH------HHH---HHCC-------CGGGCB
T ss_pred             CCchHHHHHHHHHHHHHH-------HHHHHhc--CCcEEEEEeCCCccccH------HHH---hhccc-----cccccCC
Confidence            223345555433222221       1111112  48999999999643321      111   11111     1123467


Q ss_pred             cHHHHHHHHHHHhcCCC-CCceEEeeC
Q 017977          265 HLDDIVNLIYEALSNPS-YRGVINGTA  290 (363)
Q Consensus       265 ~v~D~a~a~~~~~~~~~-~~g~~~i~~  290 (363)
                      .++|+|++++.++.... ..|.+.+.+
T Consensus       255 ~pedvA~~v~~L~s~~~~itG~~ivdg  281 (346)
T 3kvo_A          255 KVDIIADAAYSIFQKPKSFTGNFVIDE  281 (346)
T ss_dssp             CTHHHHHHHHHHHTSCTTCCSCEEEHH
T ss_pred             CHHHHHHHHHHHHhcCCCCCceEEECC
Confidence            89999999999998733 456554544

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.76  E-value=2e-18  Score=151.93  Aligned_cols=205  Identities=12%  Similarity=0.053  Sum_probs=133.5

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCC-----CCccccCcccccCcchHHhhcc-------C
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KKTRFFPGVMIAEEPQWRDCIQ-------G  116 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~-------~  116 (363)
                      .+++|+||||+|+||+++++.|+++|++|++++|+..+.+.....     ........+|+.|.+++.++++       +
T Consensus        27 ~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~  106 (286)
T 1xu9_A           27 QGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGG  106 (286)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            457999999999999999999999999999999987654332110     0112244579999888877664       7


Q ss_pred             CCEEEEc-cCCCCCC--CCChhhHHHHHHHHHHHHHHHHHHHHhC-CCCCCCeEEEeccceecCCcccccccCCCcchhh
Q 017977          117 STAVVNL-AGTPIGT--RWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCA  192 (363)
Q Consensus       117 ~d~Vi~~-a~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~  192 (363)
                      +|+|||+ |+.....  ..+.+..+..+++|+.++.++++++.+. ..+..++|++||.++..+       .+....|..
T Consensus       107 iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~-------~~~~~~Y~a  179 (286)
T 1xu9_A          107 LDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVA-------YPMVAAYSA  179 (286)
T ss_dssp             CSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSC-------CTTCHHHHH
T ss_pred             CCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCcccccC-------CCCccHHHH
Confidence            8999999 5653221  2245566788999999999998888652 113467999999843222       223345555


Q ss_pred             hhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHH
Q 017977          193 KVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL  272 (363)
Q Consensus       193 ~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a  272 (363)
                      +|.+...+.++      +..+......++++++++||.+.++...         ....      +.....+++++|+|++
T Consensus       180 sK~a~~~~~~~------l~~e~~~~~~~i~v~~v~Pg~v~t~~~~---------~~~~------~~~~~~~~~~~~vA~~  238 (286)
T 1xu9_A          180 SKFALDGFFSS------IRKEYSVSRVNVSITLCVLGLIDTETAM---------KAVS------GIVHMQAAPKEECALE  238 (286)
T ss_dssp             HHHHHHHHHHH------HHHHHHHHTCCCEEEEEEECCBCCHHHH---------HHSC------GGGGGGCBCHHHHHHH
T ss_pred             HHHHHHHHHHH------HHHHHhhcCCCeEEEEeecCccCChhHH---------Hhcc------ccccCCCCCHHHHHHH
Confidence            54333222211      1111111234899999999988754210         0000      0112357899999999


Q ss_pred             HHHHhcCCC
Q 017977          273 IYEALSNPS  281 (363)
Q Consensus       273 ~~~~~~~~~  281 (363)
                      ++.++..+.
T Consensus       239 i~~~~~~~~  247 (286)
T 1xu9_A          239 IIKGGALRQ  247 (286)
T ss_dssp             HHHHHHTTC
T ss_pred             HHHHHhcCC
Confidence            999997654

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.75  E-value=8.4e-18  Score=147.40  Aligned_cols=222  Identities=15%  Similarity=0.084  Sum_probs=140.4

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCC-CCccccCcccccCcchHHhhcc-------CCCEE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTAV  120 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~d~V  120 (363)
                      .+++++||||+|+||+++++.|+++|++|++++|+.......... ........+|+.|.+++.++++       ++|++
T Consensus         4 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l   83 (281)
T 3zv4_A            4 TGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDTL   83 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            457899999999999999999999999999999987654432211 1112245679999888776654       67999


Q ss_pred             EEccCCCCCCC--------CChhhHHHHHHHHHHHHHHHHHHHHhC-CCCCCCeEEEeccceecCCcccccccCCCcchh
Q 017977          121 VNLAGTPIGTR--------WSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYC  191 (363)
Q Consensus       121 i~~a~~~~~~~--------~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~  191 (363)
                      ||+||......        ...+..+..+++|+.++.++++++.+. .....++|++||..+.++       .+....|.
T Consensus        84 vnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------~~~~~~Y~  156 (281)
T 3zv4_A           84 IPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFYP-------NGGGPLYT  156 (281)
T ss_dssp             ECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSS-------SSSCHHHH
T ss_pred             EECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhccC-------CCCCchhH
Confidence            99999742211        112346778999999999999988653 112357999999854332       22334566


Q ss_pred             hhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCccc-----chH---HHH-HHHhCCCCCCCCCccc
Q 017977          192 AKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALA-----KMI---PLF-MMFAGGPLGSGQQWFS  262 (363)
Q Consensus       192 ~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~-----~~~---~~~-~~~~~~~~~~~~~~~~  262 (363)
                      .+|.+...+.+         ....+...++.+..++||.+..+......     ...   +.. ......++      ..
T Consensus       157 asKaa~~~l~~---------~la~e~~~~Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~------~r  221 (281)
T 3zv4_A          157 ATKHAVVGLVR---------QMAFELAPHVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPI------GR  221 (281)
T ss_dssp             HHHHHHHHHHH---------HHHHHHTTTSEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTCTT------SS
T ss_pred             HHHHHHHHHHH---------HHHHHhcCCCEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcCCC------CC
Confidence            65433332222         11111112499999999999876321100     000   011 11122222      23


Q ss_pred             cccHHHHHHHHHHHhcCCC---CCc-eEEeeCCC
Q 017977          263 WIHLDDIVNLIYEALSNPS---YRG-VINGTAPN  292 (363)
Q Consensus       263 ~i~v~D~a~a~~~~~~~~~---~~g-~~~i~~~~  292 (363)
                      +..++|+|++++.++..+.   ..| ++++.+|.
T Consensus       222 ~~~pedvA~~v~fL~s~~~~~~itG~~i~vdGG~  255 (281)
T 3zv4_A          222 MPALEEYTGAYVFFATRGDSLPATGALLNYDGGM  255 (281)
T ss_dssp             CCCGGGGSHHHHHHHSTTTSTTCSSCEEEESSSG
T ss_pred             CCCHHHHHHHHHHhhcccccccccCcEEEECCCC
Confidence            6789999999999998333   345 88887764

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.75  E-value=1.8e-17  Score=144.48  Aligned_cols=222  Identities=13%  Similarity=-0.016  Sum_probs=140.3

Q ss_pred             CccEEEEecC--cchHHHHHHHHHHhCCCEEEEEeCCCCcc-cccCCC-CCccccCcccccCcchHHhhcc---------
Q 017977           49 SQMTVSVTGA--TGFIGRRLVQRLQADNHQVRVLTRSRSKA-ELIFPG-KKTRFFPGVMIAEEPQWRDCIQ---------  115 (363)
Q Consensus        49 ~~~~vlVtGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~-~~~~~~~~~d~~~~~~~~~~~~---------  115 (363)
                      .+++++||||  +|+||+++++.|+++|++|++++|+..+. +..... ........+|+.|.+++.++++         
T Consensus         6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   85 (269)
T 2h7i_A            6 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAG   85 (269)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTT
T ss_pred             CCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            4468999999  99999999999999999999999987542 222111 1112245689999988877765         


Q ss_pred             -CCCEEEEccCCCCC--------CCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCC
Q 017977          116 -GSTAVVNLAGTPIG--------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITW  186 (363)
Q Consensus       116 -~~d~Vi~~a~~~~~--------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~  186 (363)
                       ++|+|||+||....        ...+.+..+..+++|+.++.++++++.+......++|++||. ..++       .+.
T Consensus        86 ~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~-~~~~-------~~~  157 (269)
T 2h7i_A           86 NKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFD-PSRA-------MPA  157 (269)
T ss_dssp             CCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECC-CSSC-------CTT
T ss_pred             CCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCc-cccc-------cCc
Confidence             78999999997431        223556678899999999999999998631112479999987 3222       222


Q ss_pred             CcchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCc------ccchH---H-HHH-HHhCCCCC
Q 017977          187 LSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA------LAKMI---P-LFM-MFAGGPLG  255 (363)
Q Consensus       187 ~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~------~~~~~---~-~~~-~~~~~~~~  255 (363)
                      ...|..+|.+...+.++       ....+. ..|+++++++||.+..+....      .....   . ... .....|++
T Consensus       158 ~~~Y~asKaa~~~l~~~-------la~e~~-~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~  229 (269)
T 2h7i_A          158 YNWMTVAKSALESVNRF-------VAREAG-KYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIG  229 (269)
T ss_dssp             THHHHHHHHHHHHHHHH-------HHHHHH-TTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTC
T ss_pred             hHHHHHHHHHHHHHHHH-------HHHHhc-ccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhccCCcc
Confidence            23444444332222211       111111 248999999999987652100      00000   0 001 11112221


Q ss_pred             CCCCccccccHHHHHHHHHHHhcCCC--CCc-eEEeeCC
Q 017977          256 SGQQWFSWIHLDDIVNLIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       256 ~~~~~~~~i~v~D~a~a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                           +.+..++|+|++++.++....  ..| .+.+.+|
T Consensus       230 -----rr~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG  263 (269)
T 2h7i_A          230 -----WNMKDATPVAKTVCALLSDWLPATTGDIIYADGG  263 (269)
T ss_dssp             -----CCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTT
T ss_pred             -----cCCCCHHHHHHHHHHHhCchhccCcceEEEecCC
Confidence                 126778999999999997543  345 6777665

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.74  E-value=2.9e-17  Score=154.23  Aligned_cols=221  Identities=14%  Similarity=0.083  Sum_probs=146.2

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCC-EEEEEeCCCCccc-------ccCCCCCccccCcccccCcchHHhhccCC---
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAE-------LIFPGKKTRFFPGVMIAEEPQWRDCIQGS---  117 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~-------~~~~~~~~~~~~~~d~~~~~~~~~~~~~~---  117 (363)
                      ..++||||||+|+||++++++|+++|+ +|++++|+.....       .+........+..+|+.|.+++.++++++   
T Consensus       225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~~~  304 (486)
T 2fr1_A          225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDD  304 (486)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHHhc
Confidence            456999999999999999999999998 5999999874221       11111122234568999999998888754   


Q ss_pred             ---CEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchh
Q 017977          118 ---TAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYC  191 (363)
Q Consensus       118 ---d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~  191 (363)
                         |+|||+||.....   ..+.+..+..+++|+.++.++.+++..  .+.++||++||.++++|       .+....|.
T Consensus       305 g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~--~~~~~~V~~SS~a~~~g-------~~g~~~Ya  375 (486)
T 2fr1_A          305 VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRE--LDLTAFVLFSSFASAFG-------APGLGGYA  375 (486)
T ss_dssp             SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTT--SCCSEEEEEEEHHHHTC-------CTTCTTTH
T ss_pred             CCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCc--CCCCEEEEEcChHhcCC-------CCCCHHHH
Confidence               9999999975432   235566778899999999999999988  67889999999866565       22223444


Q ss_pred             hhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHH
Q 017977          192 AKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVN  271 (363)
Q Consensus       192 ~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  271 (363)
                      .+          |........ .... .|+++++++|+.+.+++.... ..   .     ..+.  .....+++.+|+++
T Consensus       376 aa----------ka~l~~la~-~~~~-~gi~v~~i~pG~~~~~gm~~~-~~---~-----~~~~--~~g~~~i~~e~~a~  432 (486)
T 2fr1_A          376 PG----------NAYLDGLAQ-QRRS-DGLPATAVAWGTWAGSGMAEG-PV---A-----DRFR--RHGVIEMPPETACR  432 (486)
T ss_dssp             HH----------HHHHHHHHH-HHHH-TTCCCEEEEECCBC---------------------CT--TTTEECBCHHHHHH
T ss_pred             HH----------HHHHHHHHH-HHHh-cCCeEEEEECCeeCCCcccch-hH---H-----HHHH--hcCCCCCCHHHHHH
Confidence            43          322222222 2222 389999999999887642210 00   0     0111  12245799999999


Q ss_pred             HHHHHhcCCCCCceEEeeCCCCcCHHHHHHHHHHH
Q 017977          272 LIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNV  306 (363)
Q Consensus       272 a~~~~~~~~~~~g~~~i~~~~~~s~~el~~~i~~~  306 (363)
                      ++..++.....  .+.+..   +.|..+...+...
T Consensus       433 ~l~~~l~~~~~--~~~v~~---~d~~~~~~~~~~~  462 (486)
T 2fr1_A          433 ALQNALDRAEV--CPIVID---VRWDRFLLAYTAQ  462 (486)
T ss_dssp             HHHHHHHTTCS--SCEECE---ECHHHHHHHHTSS
T ss_pred             HHHHHHhCCCC--eEEEEe---CCHHHHhhhhccc
Confidence            99999986542  233322   5677766554433

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.74  E-value=2.7e-17  Score=146.39  Aligned_cols=221  Identities=10%  Similarity=0.021  Sum_probs=137.7

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccc----cCCCC-CccccCcccccCc-chHHhhcc------
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL----IFPGK-KTRFFPGVMIAEE-PQWRDCIQ------  115 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~~~-~~~~~~~~d~~~~-~~~~~~~~------  115 (363)
                      ..+++|+||||+|+||++++++|+++|++|++++|+..+...    +.... ....+..+|+.|. +++..+++      
T Consensus        10 ~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~   89 (311)
T 3o26_A           10 TKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHF   89 (311)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhC
Confidence            345689999999999999999999999999999998765322    11111 1222456899998 76665543      


Q ss_pred             -CCCEEEEccCCCCC---------------------------------CCCChhhHHHHHHHHHHHHHHHHHHHHhC--C
Q 017977          116 -GSTAVVNLAGTPIG---------------------------------TRWSSEIKKEIKESRIRVTSKVVDLINES--P  159 (363)
Q Consensus       116 -~~d~Vi~~a~~~~~---------------------------------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~  159 (363)
                       ++|+|||+||....                                 .....+..+..+++|+.++.++++++...  .
T Consensus        90 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~  169 (311)
T 3o26_A           90 GKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQL  169 (311)
T ss_dssp             SSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTT
T ss_pred             CCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhhcc
Confidence             78999999997421                                 11234556778999999998888887643  1


Q ss_pred             CCCCCeEEEeccceecCCcc--------cccccCCCcch------------------hhhhhhcccchhhHHHHHHHHHH
Q 017977          160 EGVRPSVLELVKPKYLMRAA--------HQEMITWLSDY------------------CAKVYCLVSFNRGVLVCREWEGT  213 (363)
Q Consensus       160 ~~~~~~v~~SS~~~~yg~~~--------~~e~~~~~~~~------------------~~~~~~~~~y~~~k~~~~~~~~~  213 (363)
                      .+..++|++||..+.++...        .+++.......                  .........|..+|.....+...
T Consensus       170 ~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~  249 (311)
T 3o26_A          170 SDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTRV  249 (311)
T ss_dssp             SSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHHHHH
T ss_pred             CCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHHHHH
Confidence            45568999999865443100        00000000000                  00000113366666444444443


Q ss_pred             HhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHHHHHhcCCC--CCceEEeeC
Q 017977          214 ALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS--YRGVINGTA  290 (363)
Q Consensus       214 ~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~--~~g~~~i~~  290 (363)
                      ......++.++.++||.|..+....                      ......++.++.++.++..+.  ..|.|..++
T Consensus       250 la~e~~~i~v~~v~PG~v~T~~~~~----------------------~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~s  306 (311)
T 3o26_A          250 LANKIPKFQVNCVCPGLVKTEMNYG----------------------IGNYTAEEGAEHVVRIALFPDDGPSGFFYDCS  306 (311)
T ss_dssp             HHHHCTTSEEEEECCCSBCSGGGTT----------------------CCSBCHHHHHHHHHHHHTCCSSCCCSCEETC-
T ss_pred             HHhhcCCceEEEecCCceecCCcCC----------------------CCCCCHHHHHHHHHHHHhCCCCCCCceEeccc
Confidence            3333337999999999987653111                      113578999999999887654  445665554

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.73  E-value=1.5e-17  Score=148.76  Aligned_cols=221  Identities=14%  Similarity=0.071  Sum_probs=134.0

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCC----------CCCccccCcccccCcchHHhhccC---
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----------GKKTRFFPGVMIAEEPQWRDCIQG---  116 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----------~~~~~~~~~~d~~~~~~~~~~~~~---  116 (363)
                      +++|+||||+|+||++++++|+++|++|++++|+.........          .........+|+.|.+++.++++.   
T Consensus         2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   81 (327)
T 1jtv_A            2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (327)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHhc
Confidence            3689999999999999999999999999998886544322110          011122446899999999888764   


Q ss_pred             --CCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcc
Q 017977          117 --STAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSD  189 (363)
Q Consensus       117 --~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~  189 (363)
                        +|+|||+||.....   ....+..+..+++|+.++.++++++...  ..+..++|++||.++..+       .+....
T Consensus        82 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~-------~~~~~~  154 (327)
T 1jtv_A           82 GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMG-------LPFNDV  154 (327)
T ss_dssp             SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSC-------CTTCHH
T ss_pred             CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccC-------CCCChH
Confidence              89999999974332   2345667889999999999999986421  035678999999854322       223334


Q ss_pred             hhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccc-h-----------HHHHHHHhCCCCCCC
Q 017977          190 YCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAK-M-----------IPLFMMFAGGPLGSG  257 (363)
Q Consensus       190 ~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~-~-----------~~~~~~~~~~~~~~~  257 (363)
                      |..+|.+...+.++       ....+. ..|+++++++|+.|.++....... .           ...+...... . ..
T Consensus       155 Y~aSK~a~~~~~~~-------la~el~-~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~  224 (327)
T 1jtv_A          155 YCASKFALEGLCES-------LAVLLL-PFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAH-S-KQ  224 (327)
T ss_dssp             HHHHHHHHHHHHHH-------HHHHHG-GGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHH-H-HH
T ss_pred             HHHHHHHHHHHHHH-------HHHHhh-hcCcEEEEEEeCcccChHHhhhhhcchhhhccCCHHHHHHHHHHHHH-H-HH
Confidence            55554332222211       111111 238999999999998764221100 0           0000000000 0 00


Q ss_pred             CCccccccHHHHHHHHHHHhcCCCCCceEE
Q 017977          258 QQWFSWIHLDDIVNLIYEALSNPSYRGVIN  287 (363)
Q Consensus       258 ~~~~~~i~v~D~a~a~~~~~~~~~~~g~~~  287 (363)
                      ...+-.+.++|+|++++.++..+.....|.
T Consensus       225 ~~~~~~~~pedvA~~i~~l~~~~~~~~~~~  254 (327)
T 1jtv_A          225 VFREAAQNPEEVAEVFLTALRAPKPTLRYF  254 (327)
T ss_dssp             HHHHHCBCHHHHHHHHHHHHHCSSCCSEEE
T ss_pred             hhhhcCCCHHHHHHHHHHHHcCCCCCeEEE
Confidence            000112589999999999998754333343

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.73  E-value=8.5e-17  Score=151.68  Aligned_cols=221  Identities=16%  Similarity=0.120  Sum_probs=148.3

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCC-EEEEEeCCCCccc-------ccCCCCCccccCcccccCcchHHhhccC--CC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAE-------LIFPGKKTRFFPGVMIAEEPQWRDCIQG--ST  118 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~-------~~~~~~~~~~~~~~d~~~~~~~~~~~~~--~d  118 (363)
                      ..++||||||+|+||++++++|+++|+ +|++++|+.....       .+........+..+|+.|.+++.+++++  +|
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~~ld  337 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTAYPPN  337 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHSCCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcCCCc
Confidence            457999999999999999999999998 6999999864311       1112222223456899999999998875  99


Q ss_pred             EEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhCCC-CCCCeEEEeccceecCCcccccccCCCcchhhhh
Q 017977          119 AVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINESPE-GVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKV  194 (363)
Q Consensus       119 ~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~  194 (363)
                      +|||+||.....   ....+..+..+++|+.++.++.+++..  . +.++||++||.++++|       .+....|..  
T Consensus       338 ~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~--~~~~~~~V~~SS~a~~~g-------~~g~~~Yaa--  406 (511)
T 2z5l_A          338 AVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTAD--IKGLDAFVLFSSVTGTWG-------NAGQGAYAA--  406 (511)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSS--CTTCCCEEEEEEGGGTTC-------CTTBHHHHH--
T ss_pred             EEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhh--ccCCCEEEEEeCHHhcCC-------CCCCHHHHH--
Confidence            999999975432   234556678899999999999999876  4 6788999999866665       222234444  


Q ss_pred             hhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHHH
Q 017977          195 YCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY  274 (363)
Q Consensus       195 ~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~  274 (363)
                              +|......... +. ..|+++++++|+.+.+.+.... .....+. ..         ....++.+|+++++.
T Consensus       407 --------aKa~ld~la~~-~~-~~gi~v~sv~pG~~~~tgm~~~-~~~~~~~-~~---------g~~~l~~e~~a~~l~  465 (511)
T 2z5l_A          407 --------ANAALDALAER-RR-AAGLPATSVAWGLWGGGGMAAG-AGEESLS-RR---------GLRAMDPDAAVDALL  465 (511)
T ss_dssp             --------HHHHHHHHHHH-HH-TTTCCCEEEEECCBCSTTCCCC-HHHHHHH-HH---------TBCCBCHHHHHHHHH
T ss_pred             --------HHHHHHHHHHH-HH-HcCCcEEEEECCcccCCccccc-ccHHHHH-hc---------CCCCCCHHHHHHHHH
Confidence                    34333333222 22 3499999999998843332211 1111111 11         134789999999999


Q ss_pred             HHhcCCCCCceEEeeCCCCcCHHHHHHHHHHH
Q 017977          275 EALSNPSYRGVINGTAPNPVRLAEMCDHLGNV  306 (363)
Q Consensus       275 ~~~~~~~~~g~~~i~~~~~~s~~el~~~i~~~  306 (363)
                      .++..+..  .+.+.   .+.|..+...+...
T Consensus       466 ~al~~~~~--~v~v~---~~d~~~~~~~~~~~  492 (511)
T 2z5l_A          466 GAMGRNDV--CVTVV---DVDWERFAPATNAI  492 (511)
T ss_dssp             HHHHHTCS--EEEEC---CBCHHHHHHHHHHH
T ss_pred             HHHhCCCC--EEEEE---eCCHHHHHhhhccc
Confidence            99976542  33333   25677777665543

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.72  E-value=2e-16  Score=147.14  Aligned_cols=221  Identities=13%  Similarity=0.055  Sum_probs=141.8

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCccc--ccCCCCCccccCcccccCcchHHhhcc-------C-CC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE--LIFPGKKTRFFPGVMIAEEPQWRDCIQ-------G-ST  118 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~-~d  118 (363)
                      ..++++||||+|+||+++++.|+++|++|++++|+.....  ....... .....+|+.|.+++.++++       + +|
T Consensus       212 ~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~~-~~~~~~Dvtd~~~v~~~~~~~~~~~g~~id  290 (454)
T 3u0b_A          212 DGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVG-GTALTLDVTADDAVDKITAHVTEHHGGKVD  290 (454)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHT-CEEEECCTTSTTHHHHHHHHHHHHSTTCCS
T ss_pred             CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcC-CeEEEEecCCHHHHHHHHHHHHHHcCCCce
Confidence            4569999999999999999999999999999998753211  1111000 1145689999988877664       3 89


Q ss_pred             EEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhh
Q 017977          119 AVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAK  193 (363)
Q Consensus       119 ~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~  193 (363)
                      +|||+||.....   ..+.+..+..+++|+.++.++.+++...  ..+..+||++||.++.++       .+....|..+
T Consensus       291 ~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g-------~~g~~~Yaas  363 (454)
T 3u0b_A          291 ILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAG-------NRGQTNYATT  363 (454)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHC-------CTTCHHHHHH
T ss_pred             EEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCC-------CCCCHHHHHH
Confidence            999999975442   3456677889999999999999999873  125568999999865444       2333456555


Q ss_pred             hhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHH
Q 017977          194 VYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLI  273 (363)
Q Consensus       194 ~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~  273 (363)
                      |.....|.++       ....+. ..|+++++++||.+.++............ .....++      ..+...+|+|+++
T Consensus       364 Kaal~~l~~~-------la~e~~-~~gI~vn~v~PG~v~T~~~~~~~~~~~~~-~~~~~~l------~r~g~pedvA~~v  428 (454)
T 3u0b_A          364 KAGMIGLAEA-------LAPVLA-DKGITINAVAPGFIETKMTEAIPLATREV-GRRLNSL------FQGGQPVDVAELI  428 (454)
T ss_dssp             HHHHHHHHHH-------HHHHHH-TTTCEEEEEEECSBCC----------CHH-HHHSBTT------SSCBCHHHHHHHH
T ss_pred             HHHHHHHHHH-------HHHHhh-hcCcEEEEEEcCcccChhhhhcchhhHHH-HHhhccc------cCCCCHHHHHHHH
Confidence            4333222211       111111 24899999999999876432111100000 0111111      2256799999999


Q ss_pred             HHHhcCCC--CCc-eEEeeCCC
Q 017977          274 YEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       274 ~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      ..++....  ..| ++++.++.
T Consensus       429 ~fL~s~~a~~itG~~i~vdGG~  450 (454)
T 3u0b_A          429 AYFASPASNAVTGNTIRVCGQA  450 (454)
T ss_dssp             HHHHCGGGTTCCSCEEEESSSB
T ss_pred             HHHhCCccCCCCCcEEEECCcc
Confidence            99987543  344 77777653

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.71  E-value=6.8e-17  Score=143.91  Aligned_cols=206  Identities=16%  Similarity=0.063  Sum_probs=131.3

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCC---------CCcccc----cCCCCCccccCcccccCcchHHhhc-
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRS---------RSKAEL----IFPGKKTRFFPGVMIAEEPQWRDCI-  114 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~---------~~~~~~----~~~~~~~~~~~~~d~~~~~~~~~~~-  114 (363)
                      .+++|+||||+|+||+++++.|+++|++|++++|.         ....+.    +.....   ...+|+.+.+++.+++ 
T Consensus         8 ~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~---~~~~D~~~~~~~~~~~~   84 (319)
T 1gz6_A            8 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGG---KAVANYDSVEAGEKLVK   84 (319)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTC---EEEEECCCGGGHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCC---eEEEeCCCHHHHHHHHH
Confidence            45789999999999999999999999999997653         222211    111111   1136888877665543 


Q ss_pred             ------cCCCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccc
Q 017977          115 ------QGSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEM  183 (363)
Q Consensus       115 ------~~~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~  183 (363)
                            .++|+|||+||.....   ....+..+..+++|+.++.++++++...  ..+..++|++||.++.++       
T Consensus        85 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~-------  157 (319)
T 1gz6_A           85 TALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYG-------  157 (319)
T ss_dssp             HHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC-------
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccC-------
Confidence                  3689999999975432   2355677889999999998888887431  135578999999855554       


Q ss_pred             cCCCcchhhhhhhcccchhhHHHHHHHHHHHhc--cCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCcc
Q 017977          184 ITWLSDYCAKVYCLVSFNRGVLVCREWEGTALK--VNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWF  261 (363)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~--~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (363)
                      .+....|..+|.+          ...+......  ...|+.+++++|+.+ .+...   ...+             ....
T Consensus       158 ~~~~~~Y~aSK~a----------~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~---~~~~-------------~~~~  210 (319)
T 1gz6_A          158 NFGQANYSAAKLG----------LLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTE---TVMP-------------EDLV  210 (319)
T ss_dssp             CTTCHHHHHHHHH----------HHHHHHHHHHHTGGGTEEEEEEEEECC-STTTG---GGSC-------------HHHH
T ss_pred             CCCCHHHHHHHHH----------HHHHHHHHHHHhcccCEEEEEEeCCCc-ccccc---ccCC-------------hhhh
Confidence            2223345554332          2222221111  123899999999986 32111   1100             0112


Q ss_pred             ccccHHHHHHHHHHHhcCCC-CCc-eEEeeCC
Q 017977          262 SWIHLDDIVNLIYEALSNPS-YRG-VINGTAP  291 (363)
Q Consensus       262 ~~i~v~D~a~a~~~~~~~~~-~~g-~~~i~~~  291 (363)
                      .++.++|+|.+++.++..+. ..| .|++.++
T Consensus       211 ~~~~p~dvA~~~~~l~s~~~~~tG~~~~v~GG  242 (319)
T 1gz6_A          211 EALKPEYVAPLVLWLCHESCEENGGLFEVGAG  242 (319)
T ss_dssp             HHSCGGGTHHHHHHHTSTTCCCCSCEEEEETT
T ss_pred             ccCCHHHHHHHHHHHhCchhhcCCCEEEECCC
Confidence            35688999999999987643 234 6766654

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.70  E-value=7.4e-17  Score=139.76  Aligned_cols=205  Identities=12%  Similarity=-0.026  Sum_probs=130.7

Q ss_pred             ccEEEEecCcchHHHHHHHHHHh---CCCEEEEEeCCCCcccccCCC------CCccccCcccccCcchHHhhcc-----
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQA---DNHQVRVLTRSRSKAELIFPG------KKTRFFPGVMIAEEPQWRDCIQ-----  115 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~---~g~~V~~~~r~~~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~~~-----  115 (363)
                      +++++||||+|+||++++++|++   +|++|++++|+..........      ........+|+.|.+++.++++     
T Consensus         6 ~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   85 (259)
T 1oaa_A            6 CAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVREL   85 (259)
T ss_dssp             SEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHHS
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHhc
Confidence            46899999999999999999999   899999999987554322110      1112244589999888776553     


Q ss_pred             ----CCC--EEEEccCCCCCC-----C-CChhhHHHHHHHHHHHHHHHHHHHHhC-C-C--CCCCeEEEeccceecCCcc
Q 017977          116 ----GST--AVVNLAGTPIGT-----R-WSSEIKKEIKESRIRVTSKVVDLINES-P-E--GVRPSVLELVKPKYLMRAA  179 (363)
Q Consensus       116 ----~~d--~Vi~~a~~~~~~-----~-~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~--~~~~~v~~SS~~~~yg~~~  179 (363)
                          .+|  +|||+||.....     . .+.+..+..+++|+.++.++++++.+. . .  +..++|++||..+..+   
T Consensus        86 ~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~~---  162 (259)
T 1oaa_A           86 PRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQP---  162 (259)
T ss_dssp             CCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSC---
T ss_pred             cccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcCC---
Confidence                358  999999974221     1 355677889999999999999999874 1 1  2346999999843221   


Q ss_pred             cccccCCCcchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc------cchHHHHHHHhCCC
Q 017977          180 HQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL------AKMIPLFMMFAGGP  253 (363)
Q Consensus       180 ~~e~~~~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~------~~~~~~~~~~~~~~  253 (363)
                          .+....|..+|.          ....+.........++++..++||.+-.+.....      ......+.  ...+
T Consensus       163 ----~~~~~~Y~asKa----------a~~~~~~~la~e~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~--~~~p  226 (259)
T 1oaa_A          163 ----YKGWGLYCAGKA----------ARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQ--KLKS  226 (259)
T ss_dssp             ----CTTCHHHHHHHH----------HHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHH--HHHH
T ss_pred             ----CCCccHHHHHHH----------HHHHHHHHHHhhCCCceEEEecCCCcCcchHHHHhhccCChhHHHHHH--Hhhh
Confidence                223334555532          2222222222111259999999998865421100      00001110  0001


Q ss_pred             CCCCCCccccccHHHHHHHHHHHhcC
Q 017977          254 LGSGQQWFSWIHLDDIVNLIYEALSN  279 (363)
Q Consensus       254 ~~~~~~~~~~i~v~D~a~a~~~~~~~  279 (363)
                            ...+.+++|+|++++.++..
T Consensus       227 ------~~~~~~p~dvA~~v~~l~~~  246 (259)
T 1oaa_A          227 ------DGALVDCGTSAQKLLGLLQK  246 (259)
T ss_dssp             ------TTCSBCHHHHHHHHHHHHHH
T ss_pred             ------cCCcCCHHHHHHHHHHHHhh
Confidence                  12368899999999999874

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.70  E-value=4.3e-17  Score=141.31  Aligned_cols=213  Identities=15%  Similarity=0.033  Sum_probs=127.5

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCC----CCccccCcccccCcchHHhhcc--------C
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG----KKTRFFPGVMIAEEPQWRDCIQ--------G  116 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~--------~  116 (363)
                      .+++++||||+|+||+++++.|+++|++|++++|+..........    ........+|+.|.+++.++++        .
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~   83 (260)
T 2qq5_A            4 NGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQGR   83 (260)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            346899999999999999999999999999999987553322110    1112244679999887766543        5


Q ss_pred             CCEEEEccCCC----------CCCCCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCccccccc
Q 017977          117 STAVVNLAGTP----------IGTRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMI  184 (363)
Q Consensus       117 ~d~Vi~~a~~~----------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~  184 (363)
                      +|+|||+||..          .....+.+..+..+++|+.++.++.+++.+.  ..+..++|++||.++ +.       .
T Consensus        84 id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~-~~-------~  155 (260)
T 2qq5_A           84 LDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGS-LQ-------Y  155 (260)
T ss_dssp             CCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGG-TS-------C
T ss_pred             ceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhh-cC-------C
Confidence            79999999521          1123345567788999999987776666431  145678999999843 21       1


Q ss_pred             CCCcchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc-cch-HHHHHHHhCCCCCCCCCccc
Q 017977          185 TWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL-AKM-IPLFMMFAGGPLGSGQQWFS  262 (363)
Q Consensus       185 ~~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~  262 (363)
                      .+...|..+|.+...+.++       ....+. ..|+++++++||.+.++..... ... ........  ....  ....
T Consensus       156 ~~~~~Y~asK~a~~~~~~~-------la~e~~-~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~--~~~~--~~~~  223 (260)
T 2qq5_A          156 MFNVPYGVGKAACDKLAAD-------CAHELR-RHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLK--QFKS--AFSS  223 (260)
T ss_dssp             CSSHHHHHHHHHHHHHHHH-------HHHHHG-GGTCEEEEEECCCSCTTTC--------------------------CH
T ss_pred             CCCCchHHHHHHHHHHHHH-------HHHHhc-cCCeEEEEEecCccccHHHHHhhccccccchhHHH--HHHh--hhcc
Confidence            1223455543322222110       111111 2389999999999987642211 000 00000000  0000  0112


Q ss_pred             cccHHHHHHHHHHHhcCCC
Q 017977          263 WIHLDDIVNLIYEALSNPS  281 (363)
Q Consensus       263 ~i~v~D~a~a~~~~~~~~~  281 (363)
                      +..++|+|++++.++..+.
T Consensus       224 ~~~pe~va~~v~~l~s~~~  242 (260)
T 2qq5_A          224 AETTELSGKCVVALATDPN  242 (260)
T ss_dssp             HHHHHHHHHHHHHHHTCTT
T ss_pred             CCCHHHHHHHHHHHhcCcc
Confidence            4689999999999997653

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.70  E-value=1.1e-17  Score=149.63  Aligned_cols=168  Identities=12%  Similarity=0.047  Sum_probs=111.2

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCC-------EEEEEeCCCC--ccc----ccCCCCCccccCcccccCcchHHhhcc
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNH-------QVRVLTRSRS--KAE----LIFPGKKTRFFPGVMIAEEPQWRDCIQ  115 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~--~~~----~~~~~~~~~~~~~~d~~~~~~~~~~~~  115 (363)
                      ++|||+||||+||||++++..|+++|+       +|+++++.+.  ...    .+... . ..+. .|+.+.+++.++++
T Consensus         3 ~~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~-~-~~~~-~di~~~~~~~~a~~   79 (327)
T 1y7t_A            3 APVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDC-A-FPLL-AGLEATDDPKVAFK   79 (327)
T ss_dssp             CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTT-T-CTTE-EEEEEESCHHHHTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhcc-c-cccc-CCeEeccChHHHhC
Confidence            347999999999999999999999986       8999998642  111    11110 0 0122 47777777888899


Q ss_pred             CCCEEEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCC-CC-CeEEEeccceecCCcccc-ccc---CCCcc
Q 017977          116 GSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEG-VR-PSVLELVKPKYLMRAAHQ-EMI---TWLSD  189 (363)
Q Consensus       116 ~~d~Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~-~~v~~SS~~~~yg~~~~~-e~~---~~~~~  189 (363)
                      ++|+|||+|+.+...   ...+.++++.|+.++.++++++.+  .+ .+ +++++|+......  +.. +..   ++...
T Consensus        80 ~~D~Vih~Ag~~~~~---~~~~~~~~~~Nv~~t~~l~~a~~~--~~~~~~~vvv~snp~~~~~--~~~~~~~~~~~p~~~  152 (327)
T 1y7t_A           80 DADYALLVGAAPRKA---GMERRDLLQVNGKIFTEQGRALAE--VAKKDVKVLVVGNPANTNA--LIAYKNAPGLNPRNF  152 (327)
T ss_dssp             TCSEEEECCCCCCCT---TCCHHHHHHHHHHHHHHHHHHHHH--HSCTTCEEEECSSSHHHHH--HHHHHTCTTSCGGGE
T ss_pred             CCCEEEECCCcCCCC---CCCHHHHHHHHHHHHHHHHHHHHh--hcCCCeEEEEeCCchhhhH--HHHHHHcCCCChhhe
Confidence            999999999975322   234678999999999999999999  54 44 5666665421111  111 111   12222


Q ss_pred             hhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCC
Q 017977          190 YCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGG  237 (363)
Q Consensus       190 ~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~  237 (363)
                                |+.+|+..+....... ...|++.+++||++|||+++.
T Consensus       153 ----------yg~tkl~~er~~~~~a-~~~g~~~~~vr~~~V~G~h~~  189 (327)
T 1y7t_A          153 ----------TAMTRLDHNRAKAQLA-KKTGTGVDRIRRMTVWGNHSS  189 (327)
T ss_dssp             ----------EECCHHHHHHHHHHHH-HHHTCCGGGEECCEEEBCSST
T ss_pred             ----------eccchHHHHHHHHHHH-HHhCcChhheeeeEEEcCCCC
Confidence                      4445543333333322 234899999999999999763

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.69  E-value=9.3e-16  Score=135.55  Aligned_cols=223  Identities=12%  Similarity=0.012  Sum_probs=134.7

Q ss_pred             CccEEEEecCc--chHHHHHHHHHHhCCCEEEEEeCCC-----------CcccccCC--CCC---cccc-----------
Q 017977           49 SQMTVSVTGAT--GFIGRRLVQRLQADNHQVRVLTRSR-----------SKAELIFP--GKK---TRFF-----------   99 (363)
Q Consensus        49 ~~~~vlVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~-----------~~~~~~~~--~~~---~~~~-----------   99 (363)
                      .+++++||||+  |+||+++++.|+++|++|++++|++           ...+....  ...   ....           
T Consensus         7 ~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (297)
T 1d7o_A            7 RGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDNPE   86 (297)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCSGG
T ss_pred             CCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhhhhhccccccccccccccceeccchh
Confidence            34689999999  9999999999999999999998642           11111100  000   0000           


Q ss_pred             -CcccccC--------cchHHhhcc-------CCCEEEEccCCCC--C---CCCChhhHHHHHHHHHHHHHHHHHHHHhC
Q 017977          100 -PGVMIAE--------EPQWRDCIQ-------GSTAVVNLAGTPI--G---TRWSSEIKKEIKESRIRVTSKVVDLINES  158 (363)
Q Consensus       100 -~~~d~~~--------~~~~~~~~~-------~~d~Vi~~a~~~~--~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  158 (363)
                       ...|+.|        .+++.++++       ++|++||+||...  .   ...+.+..+..+++|+.++.++++++.+.
T Consensus        87 dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~  166 (297)
T 1d7o_A           87 DVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPI  166 (297)
T ss_dssp             GSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             hhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence             1122222        455555443       6899999998532  1   23456677889999999999999999873


Q ss_pred             CCCCCCeEEEeccceecCCcccccccCCC-cchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCC
Q 017977          159 PEGVRPSVLELVKPKYLMRAAHQEMITWL-SDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGG  237 (363)
Q Consensus       159 ~~~~~~~v~~SS~~~~yg~~~~~e~~~~~-~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~  237 (363)
                      .....++|++||.++.++       .+.. ..|..+|.+...+.++  +..+     +....|++++.++||.+.++...
T Consensus       167 m~~~g~iv~isS~~~~~~-------~~~~~~~Y~asKaa~~~~~~~--la~e-----~~~~~gi~vn~v~PG~v~T~~~~  232 (297)
T 1d7o_A          167 MNPGGASISLTYIASERI-------IPGYGGGMSSAKAALESDTRV--LAFE-----AGRKQNIRVNTISAGPLGSRAAK  232 (297)
T ss_dssp             EEEEEEEEEEECGGGTSC-------CTTCTTTHHHHHHHHHHHHHH--HHHH-----HHHHHCCEEEEEEECCCBCCCSS
T ss_pred             hccCceEEEEeccccccC-------CCCcchHHHHHHHHHHHHHHH--HHHH-----hCcccCcEEEEEeccccccchhh
Confidence            111257999999844322       1222 3566554433333221  1111     11113899999999999988543


Q ss_pred             cccchHHHH--HHHhCCCCCCCCCccccccHHHHHHHHHHHhcCCC--CCc-eEEeeCCC
Q 017977          238 ALAKMIPLF--MMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       238 ~~~~~~~~~--~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      ... ..+.+  ......+++      .+..++|+|++++.++....  ..| .+++.++.
T Consensus       233 ~~~-~~~~~~~~~~~~~p~~------r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG~  285 (297)
T 1d7o_A          233 AIG-FIDTMIEYSYNNAPIQ------KTLTADEVGNAAAFLVSPLASAITGATIYVDNGL  285 (297)
T ss_dssp             CCS-HHHHHHHHHHHHSSSC------CCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             hcc-ccHHHHHHhhccCCCC------CCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence            211 11111  111122221      35789999999999986432  344 78887763

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.66  E-value=7.7e-16  Score=144.11  Aligned_cols=200  Identities=14%  Similarity=0.071  Sum_probs=137.0

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCC-EEEEEeCCCCccc---c----cCCCCCccccCcccccCcchHHhhcc------C
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAE---L----IFPGKKTRFFPGVMIAEEPQWRDCIQ------G  116 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~---~----~~~~~~~~~~~~~d~~~~~~~~~~~~------~  116 (363)
                      +++|||||+|+||++++++|+++|+ +|+++.|+.....   .    +........+..+|+.|.+++.++++      .
T Consensus       240 ~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~g~  319 (496)
T 3mje_A          240 GSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPEDAP  319 (496)
T ss_dssp             SEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTTSC
T ss_pred             CEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHhCC
Confidence            6899999999999999999999998 8888898743321   1    11112223355689999999888775      4


Q ss_pred             CCEEEEccCCC-CC---CCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhh
Q 017977          117 STAVVNLAGTP-IG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCA  192 (363)
Q Consensus       117 ~d~Vi~~a~~~-~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~  192 (363)
                      +|+|||+||.. ..   .....+..+..+++|+.++.++.+++..  ....+||++||.++++|       .+....|..
T Consensus       320 ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~--~~~~~iV~~SS~a~~~g-------~~g~~~YaA  390 (496)
T 3mje_A          320 LTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTAD--LDLDAFVLFSSGAAVWG-------SGGQPGYAA  390 (496)
T ss_dssp             EEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTT--SCCSEEEEEEEHHHHTT-------CTTCHHHHH
T ss_pred             CeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhc--cCCCEEEEEeChHhcCC-------CCCcHHHHH
Confidence            79999999975 22   2345566788999999999999999998  67788999999876665       233334554


Q ss_pred             hhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHH
Q 017977          193 KVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL  272 (363)
Q Consensus       193 ~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a  272 (363)
                      +          |.....+ ...+.. .|+++++|.||.+.+.+..........+.  .        .....+..++.+++
T Consensus       391 a----------Ka~ldal-a~~~~~-~Gi~v~sV~pG~w~~~gm~~~~~~~~~l~--~--------~g~~~l~pe~~~~~  448 (496)
T 3mje_A          391 A----------NAYLDAL-AEHRRS-LGLTASSVAWGTWGEVGMATDPEVHDRLV--R--------QGVLAMEPEHALGA  448 (496)
T ss_dssp             H----------HHHHHHH-HHHHHH-TTCCCEEEEECEESSSCC------CHHHH--H--------TTEEEECHHHHHHH
T ss_pred             H----------HHHHHHH-HHHHHh-cCCeEEEEECCcccCCccccChHHHHHHH--h--------cCCCCCCHHHHHHH
Confidence            4          3222222 222222 49999999999987765432111111111  0        11235789999999


Q ss_pred             HHHHhcCCC
Q 017977          273 IYEALSNPS  281 (363)
Q Consensus       273 ~~~~~~~~~  281 (363)
                      +..++..+.
T Consensus       449 l~~~l~~~~  457 (496)
T 3mje_A          449 LDQMLENDD  457 (496)
T ss_dssp             HHHHHHHTC
T ss_pred             HHHHHcCCC
Confidence            999997654

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.63  E-value=3.8e-15  Score=141.03  Aligned_cols=223  Identities=13%  Similarity=0.007  Sum_probs=142.3

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCE-EEEE-eCCCCc-------------ccc----cCCCCCccccCcccccCcch
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQ-VRVL-TRSRSK-------------AEL----IFPGKKTRFFPGVMIAEEPQ  109 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~-V~~~-~r~~~~-------------~~~----~~~~~~~~~~~~~d~~~~~~  109 (363)
                      +.+++|||||+|+||.+++++|+++|++ |+++ +|+..+             ...    +........+..+|+.|.++
T Consensus       250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~  329 (525)
T 3qp9_A          250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAEA  329 (525)
T ss_dssp             TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHHH
Confidence            4568999999999999999999999987 6666 787532             111    11111222355689999999


Q ss_pred             HHhhccC------CCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhCC-C-C-CCCeEEEeccceecCC
Q 017977          110 WRDCIQG------STAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINESP-E-G-VRPSVLELVKPKYLMR  177 (363)
Q Consensus       110 ~~~~~~~------~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-~-~~~~v~~SS~~~~yg~  177 (363)
                      +.++++.      +|+|||+||.....   ..+.+..+..+++|+.++.++.+++.... . + ..+||++||.++++| 
T Consensus       330 v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~g-  408 (525)
T 3qp9_A          330 AARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWG-  408 (525)
T ss_dssp             HHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTTC-
T ss_pred             HHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcCC-
Confidence            9888764      69999999975442   34556678899999999999999999841 1 1 678999999866555 


Q ss_pred             cccccccCCCcchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCC
Q 017977          178 AAHQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSG  257 (363)
Q Consensus       178 ~~~~e~~~~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~  257 (363)
                            .+....|..+          |.....+ .. .....|+++++|.||.+ +.+..........+. ..       
T Consensus       409 ------~~g~~~Yaaa----------Ka~l~~l-A~-~~~~~gi~v~sI~pG~~-~tgm~~~~~~~~~~~-~~-------  461 (525)
T 3qp9_A          409 ------GAGQGAYAAG----------TAFLDAL-AG-QHRADGPTVTSVAWSPW-EGSRVTEGATGERLR-RL-------  461 (525)
T ss_dssp             ------CTTCHHHHHH----------HHHHHHH-HT-SCCSSCCEEEEEEECCB-TTSGGGSSHHHHHHH-HT-------
T ss_pred             ------CCCCHHHHHH----------HHHHHHH-HH-HHHhCCCCEEEEECCcc-ccccccchhhHHHHH-hc-------
Confidence                  2223345444          3222222 11 11223999999999998 322211111111111 11       


Q ss_pred             CCccccccHHHHHHHHHHHhcCCCCCceEEeeCCCCcCHHHHHHHHHHH
Q 017977          258 QQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNV  306 (363)
Q Consensus       258 ~~~~~~i~v~D~a~a~~~~~~~~~~~g~~~i~~~~~~s~~el~~~i~~~  306 (363)
                        ....+..+++++++..++..+..  ...+.   .+.|..+...+...
T Consensus       462 --g~~~l~pee~a~~l~~~l~~~~~--~v~v~---~~dw~~~~~~~~~~  503 (525)
T 3qp9_A          462 --GLRPLAPATALTALDTALGHGDT--AVTIA---DVDWSSFAPGFTTA  503 (525)
T ss_dssp             --TBCCBCHHHHHHHHHHHHHHTCS--EEEEC---CBCHHHHHHHHHSS
T ss_pred             --CCCCCCHHHHHHHHHHHHhCCCC--eEEEE---eCCHHHHHhhcccc
Confidence              12358899999999999986542  22222   26676666655443

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.62  E-value=1.8e-15  Score=146.27  Aligned_cols=227  Identities=15%  Similarity=0.088  Sum_probs=138.3

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeC---------CCCcccccC----CCCCccccCcccccCcchHHhhcc
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTR---------SRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ  115 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r---------~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~  115 (363)
                      .+++++||||+|+||+++++.|+++|++|++++|         +....+...    ....   ...+|+.|.+++.++++
T Consensus        18 ~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~D~~d~~~~~~~~~   94 (613)
T 3oml_A           18 DGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGG---EAVADYNSVIDGAKVIE   94 (613)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTC---CEEECCCCGGGHHHHHC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCC---eEEEEeCCHHHHHHHHH
Confidence            4478999999999999999999999999999988         332222111    1111   12367777777766664


Q ss_pred             -------CCCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccc
Q 017977          116 -------GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEM  183 (363)
Q Consensus       116 -------~~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~  183 (363)
                             .+|++|||||.....   ..+.+..+..+++|+.++.++++++...  ..+..++|++||.++.++       
T Consensus        95 ~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~-------  167 (613)
T 3oml_A           95 TAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYG-------  167 (613)
T ss_dssp             ----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHC-------
T ss_pred             HHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCC-------
Confidence                   579999999975432   3456678889999999999999888432  145568999999866554       


Q ss_pred             cCCCcchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCcccc
Q 017977          184 ITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSW  263 (363)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (363)
                      .+....|..+|.+...+.++       ....+. ..|+.+..+.|+.+-......    .+             ......
T Consensus       168 ~~~~~~Y~asKaal~~lt~~-------la~e~~-~~gI~vn~v~Pg~~t~~~~~~----~~-------------~~~~~~  222 (613)
T 3oml_A          168 NFGQVNYTAAKMGLIGLANT-------VAIEGA-RNNVLCNVIVPTAASRMTEGI----LP-------------DILFNE  222 (613)
T ss_dssp             CTTCHHHHHHHHHHHHHHHH-------HHHHHG-GGTEEEEEEEEC------CCC----CC-------------HHHHTT
T ss_pred             CCCChHHHHHHHHHHHHHHH-------HHHHhC-ccCeEEEEEECCCCChhhhhc----cc-------------hhhhhc
Confidence            23334566665443333221       111111 238999999998642111110    00             011234


Q ss_pred             ccHHHHHHHHHHHhcCCC-CCc-eEEeeCC--------------------CCcCHHHHHHHHHHHhCCC
Q 017977          264 IHLDDIVNLIYEALSNPS-YRG-VINGTAP--------------------NPVRLAEMCDHLGNVLGRP  310 (363)
Q Consensus       264 i~v~D~a~a~~~~~~~~~-~~g-~~~i~~~--------------------~~~s~~el~~~i~~~~g~~  310 (363)
                      +..+|+|.+++.++.... ..| .+++.+|                    ...+..++.+.+.++....
T Consensus       223 ~~pedvA~~v~~L~s~~~~~tG~~i~vdGG~~~~~~~~~~~g~~~~~~~~~~~~~e~~~~~w~~i~~~~  291 (613)
T 3oml_A          223 LKPKLIAPVVAYLCHESCEDNGSYIESAAGWATKLHMVRGKGAVLRPSLDDPVTIEYVKDVWSNVTDMS  291 (613)
T ss_dssp             CCGGGTHHHHHHTTSTTCCCCSCEEEEETTEEEEECCCBCCCCCSSSSTTSCCCHHHHHHTHHHHTCCT
T ss_pred             CCHHHHHHHHHHhcCCCcCCCceEEEECCCeEEEEEEEecCCEEecCccccCCCHHHHHHHHHHhhccc
Confidence            578999999999887643 233 6655432                    1246666666666666654

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.60  E-value=1.1e-14  Score=129.79  Aligned_cols=223  Identities=13%  Similarity=0.025  Sum_probs=131.6

Q ss_pred             CccEEEEecC--cchHHHHHHHHHHhCCCEEEEEeCCC-----------Ccc---cccCCCCC--cccc-----------
Q 017977           49 SQMTVSVTGA--TGFIGRRLVQRLQADNHQVRVLTRSR-----------SKA---ELIFPGKK--TRFF-----------   99 (363)
Q Consensus        49 ~~~~vlVtGa--tG~iG~~l~~~L~~~g~~V~~~~r~~-----------~~~---~~~~~~~~--~~~~-----------   99 (363)
                      .+++++||||  +|+||+++++.|+++|++|++++|++           ...   ..+.....  ....           
T Consensus         8 ~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~   87 (315)
T 2o2s_A            8 RGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFDKPE   87 (315)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTCSSTT
T ss_pred             CCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhccccccccccccccccccccc
Confidence            3468999999  89999999999999999999998753           111   11100000  0001           


Q ss_pred             -CcccccC--------cchHHhhcc-------CCCEEEEccCCCC--C---CCCChhhHHHHHHHHHHHHHHHHHHHHhC
Q 017977          100 -PGVMIAE--------EPQWRDCIQ-------GSTAVVNLAGTPI--G---TRWSSEIKKEIKESRIRVTSKVVDLINES  158 (363)
Q Consensus       100 -~~~d~~~--------~~~~~~~~~-------~~d~Vi~~a~~~~--~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  158 (363)
                       ..+|+.|        .+++.++++       ++|++||+||...  .   .....+..+..+++|+.++.++++++.+.
T Consensus        88 ~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~  167 (315)
T 2o2s_A           88 DVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPI  167 (315)
T ss_dssp             SSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHSTT
T ss_pred             hhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence             1234443        445555443       6899999999632  1   23455677889999999999999999873


Q ss_pred             CCCCCCeEEEeccceecCCcccccccCCC-cchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCC
Q 017977          159 PEGVRPSVLELVKPKYLMRAAHQEMITWL-SDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGG  237 (363)
Q Consensus       159 ~~~~~~~v~~SS~~~~yg~~~~~e~~~~~-~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~  237 (363)
                      .....++|++||.++..+       .+.. ..|..+|.+...+.++  +..    + +....|++++.++||.|..+...
T Consensus       168 m~~~g~Iv~isS~~~~~~-------~~~~~~~Y~asKaal~~l~~~--la~----e-l~~~~gIrvn~v~PG~v~T~~~~  233 (315)
T 2o2s_A          168 MNEGGSAVTLSYLAAERV-------VPGYGGGMSSAKAALESDTRT--LAW----E-AGQKYGVRVNAISAGPLKSRAAS  233 (315)
T ss_dssp             EEEEEEEEEEEEGGGTSC-------CTTCCTTHHHHHHHHHHHHHH--HHH----H-HHHHTCCEEEEEEECCCCCHHHH
T ss_pred             HhcCCEEEEEeccccccc-------CCCccHHHHHHHHHHHHHHHH--HHH----H-hCcccCeEEEEEecccccchhhh
Confidence            111257999999843222       1222 2566655443333221  111    1 11114899999999998764210


Q ss_pred             c-----ccchHHHH-H-HHhCCCCCCCCCccccccHHHHHHHHHHHhcCCC--CCc-eEEeeCC
Q 017977          238 A-----LAKMIPLF-M-MFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       238 ~-----~~~~~~~~-~-~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      .     ...+.... . .....+++      .+..++|+|++++.++....  ..| .+.+.+|
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~p~~------r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  291 (315)
T 2o2s_A          234 AIGKSGEKSFIDYAIDYSYNNAPLR------RDLHSDDVGGAALFLLSPLARAVSGVTLYVDNG  291 (315)
T ss_dssp             HTTCSSSSCHHHHHHHHHHHHSSSC------CCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             hccccccchhHHHHHHHHhccCCCC------CCCCHHHHHHHHHHHhCchhccCcCCEEEECCC
Confidence            0     00111111 0 01112221      25789999999999987433  345 6666665

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.60  E-value=1.3e-14  Score=129.54  Aligned_cols=229  Identities=14%  Similarity=-0.025  Sum_probs=120.2

Q ss_pred             CccEEEEecC--cchHHHHHHHHHHhCCCEEEEEeCCC-----------Cccccc-----------CCCCC-------cc
Q 017977           49 SQMTVSVTGA--TGFIGRRLVQRLQADNHQVRVLTRSR-----------SKAELI-----------FPGKK-------TR   97 (363)
Q Consensus        49 ~~~~vlVtGa--tG~iG~~l~~~L~~~g~~V~~~~r~~-----------~~~~~~-----------~~~~~-------~~   97 (363)
                      .+++++||||  +|+||+++++.|+++|++|++++|++           ......           .....       ..
T Consensus         8 ~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (319)
T 2ptg_A            8 RGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLVFD   87 (319)
T ss_dssp             TTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------CCS
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhcccccccc
Confidence            3468999999  89999999999999999999998642           111100           00000       00


Q ss_pred             cc------------CcccccC--------cchHHhhcc-------CCCEEEEccCCCC--C---CCCChhhHHHHHHHHH
Q 017977           98 FF------------PGVMIAE--------EPQWRDCIQ-------GSTAVVNLAGTPI--G---TRWSSEIKKEIKESRI  145 (363)
Q Consensus        98 ~~------------~~~d~~~--------~~~~~~~~~-------~~d~Vi~~a~~~~--~---~~~~~~~~~~~~~~n~  145 (363)
                      ..            ..+|+.|        .+++.++++       ++|++||+||...  .   .....+..+..+++|+
T Consensus        88 ~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~vN~  167 (319)
T 2ptg_A           88 KIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSSS  167 (319)
T ss_dssp             EEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHHHT
T ss_pred             ccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhHhh
Confidence            01            1223333        345554443       6899999998532  1   2345666788999999


Q ss_pred             HHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCC-cchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEE
Q 017977          146 RVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWL-SDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLA  224 (363)
Q Consensus       146 ~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~-~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~  224 (363)
                      .++.++++++.+......++|++||.++..+       .+.. ..|..+|.+...+.++  +..++     ....|++++
T Consensus       168 ~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~-------~~~~~~~Y~asKaal~~l~~~--la~el-----~~~~gIrvn  233 (319)
T 2ptg_A          168 YSFVSLLQHFLPLMKEGGSALALSYIASEKV-------IPGYGGGMSSAKAALESDCRT--LAFEA-----GRARAVRVN  233 (319)
T ss_dssp             HHHHHHHHHHGGGEEEEEEEEEEEECC-------------------------THHHHHH--HHHHH-----HHHHCCEEE
T ss_pred             HHHHHHHHHHHHHHhcCceEEEEeccccccc-------cCccchhhHHHHHHHHHHHHH--HHHHh-----ccccCeeEE
Confidence            9999999999873111257999999854322       1222 3566665444333321  11111     111389999


Q ss_pred             EEeeceEEeCCCCcccc-hHHHH-HHHhCCCCCCCCCccccccHHHHHHHHHHHhcCCC--CCc-eEEeeCCC
Q 017977          225 LIRIGIVLGKDGGALAK-MIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       225 ilRp~~v~g~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      .|+||.+..+....... ....+ .... ..+........+..++|+|++++.++....  ..| .+.+.+|.
T Consensus       234 ~v~PG~v~T~~~~~~~~~~~~~~~~~~~-~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~  305 (319)
T 2ptg_A          234 CISAGPLKSRAASAIGKAGDKTFIDLAI-DYSEANAPLQKELESDDVGRAALFLLSPLARAVTGATLYVDNGL  305 (319)
T ss_dssp             EEEECCCC--------------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred             EEeeCCccChhhhhcccccchhhHHHHH-HHHhccCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEECCCc
Confidence            99999997763211100 00000 0000 000000011236789999999999987533  445 77776664

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.59  E-value=1.8e-14  Score=128.99  Aligned_cols=170  Identities=9%  Similarity=0.001  Sum_probs=107.8

Q ss_pred             ccEEEEecCcc--hHHHHHHHHHHhCCCEEEEEeCCC---------Cc----ccccCCCCC---ccccCcccccCc--c-
Q 017977           50 QMTVSVTGATG--FIGRRLVQRLQADNHQVRVLTRSR---------SK----AELIFPGKK---TRFFPGVMIAEE--P-  108 (363)
Q Consensus        50 ~~~vlVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~---------~~----~~~~~~~~~---~~~~~~~d~~~~--~-  108 (363)
                      .++++||||++  .||++++++|+++|++|++.+|++         .+    .........   ......+|+.+.  + 
T Consensus         2 ~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~   81 (329)
T 3lt0_A            2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND   81 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGGG
T ss_pred             CcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchhh
Confidence            46899999875  999999999999999999777554         11    111111000   011222444443  3 


Q ss_pred             -----------------hHHhhcc-------CCCEEEEccCCCC--C---CCCChhhHHHHHHHHHHHHHHHHHHHHhC-
Q 017977          109 -----------------QWRDCIQ-------GSTAVVNLAGTPI--G---TRWSSEIKKEIKESRIRVTSKVVDLINES-  158 (363)
Q Consensus       109 -----------------~~~~~~~-------~~d~Vi~~a~~~~--~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-  158 (363)
                                       ++.++++       .+|++||+||...  .   ...+.+..+..+++|+.++..+.+++... 
T Consensus        82 ~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m  161 (329)
T 3lt0_A           82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM  161 (329)
T ss_dssp             CCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred             hhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence                             6665543       5899999999631  1   23456677889999999999999999874 


Q ss_pred             CCCCCCeEEEeccceecCCcccccccCCC-cchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeC
Q 017977          159 PEGVRPSVLELVKPKYLMRAAHQEMITWL-SDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGK  234 (363)
Q Consensus       159 ~~~~~~~v~~SS~~~~yg~~~~~e~~~~~-~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~  234 (363)
                      ..+ .++|++||..+..+       .+.. ..|..+|.+...|.++  +..++     ....|+.+..+.||.|..+
T Consensus       162 ~~~-g~Iv~isS~~~~~~-------~~~~~~~Y~asKaal~~~~~~--la~el-----~~~~gI~vn~v~PG~v~T~  223 (329)
T 3lt0_A          162 KPQ-SSIISLTYHASQKV-------VPGYGGGMSSAKAALESDTRV--LAYHL-----GRNYNIRINTISAGPLKSR  223 (329)
T ss_dssp             EEE-EEEEEEECGGGTSC-------CTTCTTTHHHHHHHHHHHHHH--HHHHH-----HHHHCCEEEEEEECCCCCH
T ss_pred             hhC-CeEEEEeCccccCC-------CCcchHHHHHHHHHHHHHHHH--HHHHh-----CCccCeEEEEEecceeech
Confidence            222 57999999854322       2223 2566665554444332  11111     1103899999999998754

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.50  E-value=3.3e-13  Score=129.89  Aligned_cols=230  Identities=10%  Similarity=0.049  Sum_probs=140.4

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcc--cccCCCCCccccCcccc-cCcchH-H---hhccCCCEEE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA--ELIFPGKKTRFFPGVMI-AEEPQW-R---DCIQGSTAVV  121 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~d~-~~~~~~-~---~~~~~~d~Vi  121 (363)
                      .++.++||||++.||+++++.|+++|++|++.+|.....  ..+...........+|+ .+.+.+ +   +.+..+|++|
T Consensus       321 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~iDiLV  400 (604)
T 2et6_A          321 KDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKYGTIDILV  400 (604)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhcCCCCEEE
Confidence            456899999999999999999999999999988743211  11111111111234566 433322 2   2234689999


Q ss_pred             EccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhhhhh
Q 017977          122 NLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYC  196 (363)
Q Consensus       122 ~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~  196 (363)
                      ||||.....   ..+.+..+..+++|+.++.++.+++.+.  ..+..++|++||.++.++       .+....|..+|.+
T Consensus       401 nNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~-------~~~~~~Y~asKaa  473 (604)
T 2et6_A          401 NNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYG-------NFGQANYSSSKAG  473 (604)
T ss_dssp             ECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSC-------CTTBHHHHHHHHH
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccC-------CCCChhHHHHHHH
Confidence            999975432   3456678889999999998888877653  134467999999865443       2333456666555


Q ss_pred             cccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHHHHH
Q 017977          197 LVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEA  276 (363)
Q Consensus       197 ~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~  276 (363)
                      ...++++       ....+. .+|+.+..|.|+. ..+.   .....+       .      ........+|+|.+++.+
T Consensus       474 l~~lt~~-------la~El~-~~gIrVn~v~PG~-~T~m---~~~~~~-------~------~~~~~~~pe~vA~~v~~L  528 (604)
T 2et6_A          474 ILGLSKT-------MAIEGA-KNNIKVNIVAPHA-ETAM---TLSIMR-------E------QDKNLYHADQVAPLLVYL  528 (604)
T ss_dssp             HHHHHHH-------HHHHHG-GGTEEEEEEEECC-CCCC-------------------------CCSSCGGGTHHHHHHT
T ss_pred             HHHHHHH-------HHHHhC-ccCeEEEEEcCCC-CCcc---ccccCc-------h------hhccCCCHHHHHHHHHHH
Confidence            4444321       111111 2389999999983 2111   001000       0      011245789999999988


Q ss_pred             hcCCC-CCc-eEEeeCC-----------------CCcCHHHHHHHHHHHhCCC
Q 017977          277 LSNPS-YRG-VINGTAP-----------------NPVRLAEMCDHLGNVLGRP  310 (363)
Q Consensus       277 ~~~~~-~~g-~~~i~~~-----------------~~~s~~el~~~i~~~~g~~  310 (363)
                      +.... ..| ++.+.+|                 ..++..++.+.+.+.....
T Consensus       529 ~s~~~~itG~~~~vdGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  581 (604)
T 2et6_A          529 GTDDVPVTGETFEIGGGWIGNTRWQRAKGAVSHDEHTTVEFIKEHLNEITDFT  581 (604)
T ss_dssp             TSTTCCCCSCEEEEETTEEEEEEEEECCCEECCSSSCCHHHHHHHHHHHTCCS
T ss_pred             hCCccCCCCcEEEECCCeeEeeeeeccccccCCCCCCCHHHHHHHHHHHhccc
Confidence            86543 344 6666554                 2356677777777666554

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.45  E-value=1.3e-12  Score=125.87  Aligned_cols=225  Identities=12%  Similarity=0.069  Sum_probs=139.8

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCC---------Cccccc----CCCCCccccCcccccCcchHHhhc-
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR---------SKAELI----FPGKKTRFFPGVMIAEEPQWRDCI-  114 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~---------~~~~~~----~~~~~~~~~~~~d~~~~~~~~~~~-  114 (363)
                      .++.++||||++.||+++++.|+++|++|++.+|+.         ...+..    .....   ....|+.|.++.++++ 
T Consensus         7 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~---~~~~d~~d~~~~~~~v~   83 (604)
T 2et6_A            7 KDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGG---VAVADYNNVLDGDKIVE   83 (604)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTC---EEEEECCCTTCHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCC---eEEEEcCCHHHHHHHHH
Confidence            346899999999999999999999999999998765         222111    11111   1124666665444333 


Q ss_pred             ------cCCCEEEEccCCCCC---CCCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccc
Q 017977          115 ------QGSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEM  183 (363)
Q Consensus       115 ------~~~d~Vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~  183 (363)
                            ..+|++|||||....   ...+.+..+..+++|+.++..+.+++.+.  ..+..++|++||..+.++       
T Consensus        84 ~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~-------  156 (604)
T 2et6_A           84 TAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYG-------  156 (604)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC-------
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCC-------
Confidence                  368999999997533   23456678889999999998888877643  134457999999865444       


Q ss_pred             cCCCcchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCcccc
Q 017977          184 ITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSW  263 (363)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (363)
                      .+....|..+|.+...++++  +..+     +. .+|+.+..|.|+ +..       .+....     .    .......
T Consensus       157 ~~~~~~Y~asKaal~~lt~~--la~E-----l~-~~gIrVn~v~Pg-~~T-------~m~~~~-----~----~~~~~~~  211 (604)
T 2et6_A          157 NFGQANYASAKSALLGFAET--LAKE-----GA-KYNIKANAIAPL-ARS-------RMTESI-----M----PPPMLEK  211 (604)
T ss_dssp             CTTBHHHHHHHHHHHHHHHH--HHHH-----HG-GGTEEEEEEEEC-CCC-------HHHHTT-----S----CHHHHTT
T ss_pred             CCCchHHHHHHHHHHHHHHH--HHHH-----hC-ccCeEEEEEccC-CcC-------cccccc-----C----Chhhhcc
Confidence            23344677766554444432  1111     11 248999999996 211       110000     0    0001123


Q ss_pred             ccHHHHHHHHHHHhcCCC-CCc-eEEeeCC------------------CCcCHHHHHHHHHHHhC
Q 017977          264 IHLDDIVNLIYEALSNPS-YRG-VINGTAP------------------NPVRLAEMCDHLGNVLG  308 (363)
Q Consensus       264 i~v~D~a~a~~~~~~~~~-~~g-~~~i~~~------------------~~~s~~el~~~i~~~~g  308 (363)
                      ...+|+|.+++.++.... ..| ++.+.+|                  ...+..++.+.+.+...
T Consensus       212 ~~pe~vA~~v~~L~s~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  276 (604)
T 2et6_A          212 LGPEKVAPLVLYLSSAENELTGQFFEVAAGFYAQIRWERSGGVLFKPDQSFTAEVVAKRFSEILD  276 (604)
T ss_dssp             CSHHHHHHHHHHHTSSSCCCCSCEEEEETTEEEEEEEEECCCEECCSSTTCCHHHHHHHHHHHTC
T ss_pred             CCHHHHHHHHHHHhCCcccCCCCEEEECCCeEEEEEEEeccceecCCCCCCCHHHHHHHHHHhhc
Confidence            579999999999987543 233 5555443                  33567888887776653

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.34  E-value=2.1e-11  Score=127.45  Aligned_cols=206  Identities=14%  Similarity=0.031  Sum_probs=127.7

Q ss_pred             CCccEEEEecCcch-HHHHHHHHHHhCCCEEEEE-eCCCCcccc----c----CCCCCccccCcccccCcchHHhhcc--
Q 017977           48 ASQMTVSVTGATGF-IGRRLVQRLQADNHQVRVL-TRSRSKAEL----I----FPGKKTRFFPGVMIAEEPQWRDCIQ--  115 (363)
Q Consensus        48 ~~~~~vlVtGatG~-iG~~l~~~L~~~g~~V~~~-~r~~~~~~~----~----~~~~~~~~~~~~d~~~~~~~~~~~~--  115 (363)
                      ..++++|||||+|+ ||+++++.|+++|++|+++ .|+......    +    ........+..+|+.|.+++..+++  
T Consensus       673 l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~i  752 (1887)
T 2uv8_A          673 FKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFI  752 (1887)
T ss_dssp             CTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHHH
Confidence            34578999999999 9999999999999999998 465543321    1    1111122245689999888776552  


Q ss_pred             -----------CCCEEEEccCCCCCC-C---CC--hhhHHHHHHHHHHHHHHHHHHHHhC---C-CCCCCeEEEecccee
Q 017977          116 -----------GSTAVVNLAGTPIGT-R---WS--SEIKKEIKESRIRVTSKVVDLINES---P-EGVRPSVLELVKPKY  174 (363)
Q Consensus       116 -----------~~d~Vi~~a~~~~~~-~---~~--~~~~~~~~~~n~~~~~~l~~~~~~~---~-~~~~~~v~~SS~~~~  174 (363)
                                 .+|+||||||..... .   ..  .+..+.++++|+.++..+++++...   . .+..++|++||..+.
T Consensus       753 ~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~ag~  832 (1887)
T 2uv8_A          753 YDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGT  832 (1887)
T ss_dssp             HSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCTTC
T ss_pred             HHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChHhc
Confidence                       589999999975332 1   23  4566889999999999999988432   1 122479999998543


Q ss_pred             cCCcccccccCCCcchhhhhhhcccchhhHHHHHHHHHHHh-ccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCC
Q 017977          175 LMRAAHQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTAL-KVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGP  253 (363)
Q Consensus       175 yg~~~~~e~~~~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~-~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~  253 (363)
                      ++         ....|..+|.+...+.         ..... .....+.++.++||.+.+............  .....+
T Consensus       833 ~g---------g~~aYaASKAAL~~Lt---------tr~lA~ela~~IrVNaV~PG~V~tT~m~~~~~~~~~--~~~~~p  892 (1887)
T 2uv8_A          833 FG---------GDGMYSESKLSLETLF---------NRWHSESWANQLTVCGAIIGWTRGTGLMSANNIIAE--GIEKMG  892 (1887)
T ss_dssp             SS---------CBTTHHHHHHHGGGHH---------HHHHHSSCTTTEEEEEEEECCEECC-----CCTTHH--HHHTTS
T ss_pred             cC---------CCchHHHHHHHHHHHH---------HHHHHHHhCCCeEEEEEEecccccccccccchhHHH--HHHhcC
Confidence            32         2234555543322220         11111 111139999999999984321100011111  111111


Q ss_pred             CCCCCCccccccHHHHHHHHHHHhcCC
Q 017977          254 LGSGQQWFSWIHLDDIVNLIYEALSNP  280 (363)
Q Consensus       254 ~~~~~~~~~~i~v~D~a~a~~~~~~~~  280 (363)
                      +       .+...+|+|++++.++...
T Consensus       893 l-------r~~sPEEVA~avlfLaSd~  912 (1887)
T 2uv8_A          893 V-------RTFSQKEMAFNLLGLLTPE  912 (1887)
T ss_dssp             C-------CCEEHHHHHHHHHGGGSHH
T ss_pred             C-------CCCCHHHHHHHHHHHhCCC
Confidence            1       2458999999999988754

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=99.32  E-value=8.9e-12  Score=111.79  Aligned_cols=208  Identities=9%  Similarity=-0.101  Sum_probs=125.8

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHh-CCCEEEEEeCCCCcccc----------------cCCCCCccccCcccccCcchH
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQA-DNHQVRVLTRSRSKAEL----------------IFPGKKTRFFPGVMIAEEPQW  110 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~----------------~~~~~~~~~~~~~d~~~~~~~  110 (363)
                      ..++++|||||++.||+++++.|++ .|++|++++|+......                ............+|+.|.+++
T Consensus        45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v  124 (405)
T 3zu3_A           45 NGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIK  124 (405)
T ss_dssp             TCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHH
T ss_pred             CCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHH
Confidence            4567999999999999999999999 99999999987654321                111112222446799998877


Q ss_pred             Hhhcc-------CCCEEEEccCCCC-------------C------------------------CCCChhhHHHHHHHHHH
Q 017977          111 RDCIQ-------GSTAVVNLAGTPI-------------G------------------------TRWSSEIKKEIKESRIR  146 (363)
Q Consensus       111 ~~~~~-------~~d~Vi~~a~~~~-------------~------------------------~~~~~~~~~~~~~~n~~  146 (363)
                      .++++       ++|++||+||...             .                        ...+++..+..+++|..
T Consensus       125 ~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~~  204 (405)
T 3zu3_A          125 QLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGG  204 (405)
T ss_dssp             HHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhch
Confidence            76654       5899999998731             1                        12356677888888888


Q ss_pred             HHH-HHHHHHHh--CCCCCCCeEEEeccceecCCcccccccCCC--cchhhhhhhcccchhhHHHHHHHHHHHhccCC-C
Q 017977          147 VTS-KVVDLINE--SPEGVRPSVLELVKPKYLMRAAHQEMITWL--SDYCAKVYCLVSFNRGVLVCREWEGTALKVNK-D  220 (363)
Q Consensus       147 ~~~-~l~~~~~~--~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~--~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~-~  220 (363)
                      +.. .+++++..  +..+..++|.+||.++..+       .+..  ..|..+|.+...++++       ....+ ... |
T Consensus       205 ~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~-------~p~~~~~aY~AaKaal~~ltrs-------LA~El-a~~~G  269 (405)
T 3zu3_A          205 EDWQMWIDALLDAGVLAEGAQTTAFTYLGEKIT-------HDIYWNGSIGAAKKDLDQKVLA-------IRESL-AAHGG  269 (405)
T ss_dssp             HHHHHHHHHHHHHTCEEEEEEEEEEECCCCGGG-------TTTTTTSHHHHHHHHHHHHHHH-------HHHHH-HTTTS
T ss_pred             hHHHHHHHHHHHHhhhhCCcEEEEEeCchhhCc-------CCCccchHHHHHHHHHHHHHHH-------HHHHh-CcccC
Confidence            765 55665542  1112246999999853211       2222  4555554433322221       11111 135 8


Q ss_pred             ceEEEEeeceEEeCCCCcc---cchHHHHHHHhCCCCCCCCCccccccHHHHHHHHHHHhcCC
Q 017977          221 VRLALIRIGIVLGKDGGAL---AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNP  280 (363)
Q Consensus       221 ~~~~ilRp~~v~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~  280 (363)
                      +++..+.|+.+-.+.....   ..+...+..    ++      -.+-..+|+++++..++...
T Consensus       270 IRVNaVaPG~i~T~~s~~ip~~p~y~~~l~~----~m------kr~G~~Ed~a~~i~~L~sd~  322 (405)
T 3zu3_A          270 GDARVSVLKAVVSQASSAIPMMPLYLSLLFK----VM------KEKGTHEGCIEQVYSLYKDS  322 (405)
T ss_dssp             CEEEEEECCCCCCHHHHTSTTHHHHHHHHHH----HH------HHHTCCCCHHHHHHHHHHHT
T ss_pred             eEEEEEEeCCCcCchhhcCCCCcHHHHHHHH----HH------hcCCCcHHHHHHHHHHHhcc
Confidence            9999999999876532111   111111110    11      01233578999999888753

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.30  E-value=4.1e-11  Score=125.04  Aligned_cols=228  Identities=11%  Similarity=-0.010  Sum_probs=136.5

Q ss_pred             CCccEEEEecCcch-HHHHHHHHHHhCCCEEEEEe-CCCCcccc----c----CCCCCccccCcccccCcchHHhhcc--
Q 017977           48 ASQMTVSVTGATGF-IGRRLVQRLQADNHQVRVLT-RSRSKAEL----I----FPGKKTRFFPGVMIAEEPQWRDCIQ--  115 (363)
Q Consensus        48 ~~~~~vlVtGatG~-iG~~l~~~L~~~g~~V~~~~-r~~~~~~~----~----~~~~~~~~~~~~d~~~~~~~~~~~~--  115 (363)
                      ..+++||||||+|+ ||+++++.|+++|++|++++ |+......    +    ...........+|+.|.+++.++++  
T Consensus       650 L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~i  729 (1878)
T 2uv9_A          650 FQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNYI  729 (1878)
T ss_dssp             CTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHH
Confidence            34568999999999 99999999999999999996 44433211    1    1111222345689999888876652  


Q ss_pred             ---------CCCEEEEccCCCCCC----CCC--hhhHHHHHHHHHHHHHHHHHHHH--h-C-CCCCCCeEEEeccceecC
Q 017977          116 ---------GSTAVVNLAGTPIGT----RWS--SEIKKEIKESRIRVTSKVVDLIN--E-S-PEGVRPSVLELVKPKYLM  176 (363)
Q Consensus       116 ---------~~d~Vi~~a~~~~~~----~~~--~~~~~~~~~~n~~~~~~l~~~~~--~-~-~~~~~~~v~~SS~~~~yg  176 (363)
                               .+|+|||+||.....    ...  .+..+.++++|+.++.+++++++  . + ..+..+||++||..+.++
T Consensus       730 ~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~~g  809 (1878)
T 2uv9_A          730 YDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGTFG  809 (1878)
T ss_dssp             HCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSSSS
T ss_pred             HHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhccC
Confidence                     489999999975332    222  45678899999999998887732  2 1 122357999999854333


Q ss_pred             CcccccccCCCcchhhhhhhcccchhhHHHHHHHHHHHhc-cCCCceEEEEeeceEE-eCCCCcccchHHHHHHHhCCCC
Q 017977          177 RAAHQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALK-VNKDVRLALIRIGIVL-GKDGGALAKMIPLFMMFAGGPL  254 (363)
Q Consensus       177 ~~~~~e~~~~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~-~~~~~~~~ilRp~~v~-g~~~~~~~~~~~~~~~~~~~~~  254 (363)
                               ....|..+|.+...+.         ...... ...+++++.+.||.+- .+.... ....  .......++
T Consensus       810 ---------g~~aYaASKAAL~aLt---------~~laAeEla~~IrVNaVaPG~V~gT~m~~~-~~~~--~~~~~~~pl  868 (1878)
T 2uv9_A          810 ---------NDGLYSESKLALETLF---------NRWYSESWGNYLTICGAVIGWTRGTGLMSA-NNLV--AEGVEKLGV  868 (1878)
T ss_dssp             ---------CCSSHHHHHHHHTTHH---------HHHHHSTTTTTEEEEEEEECCBCCTTSCSH-HHHT--HHHHHTTTC
T ss_pred             ---------CchHHHHHHHHHHHHH---------HHHHHHHcCCCeEEEEEEecceecCccccc-chhh--HHHHHhcCC
Confidence                     1234555543222221         111111 1124999999999987 332211 0110  111121111


Q ss_pred             CCCCCccccccHHHHHHHHHHHhcCCC---CCc-eEEee--CCC--CcCHHHHHHHH
Q 017977          255 GSGQQWFSWIHLDDIVNLIYEALSNPS---YRG-VINGT--APN--PVRLAEMCDHL  303 (363)
Q Consensus       255 ~~~~~~~~~i~v~D~a~a~~~~~~~~~---~~g-~~~i~--~~~--~~s~~el~~~i  303 (363)
                             .+...+|+|++++.++....   ..| .+.+.  +|.  ...+.++...+
T Consensus       869 -------r~~sPeEVA~avlfLaSd~a~s~iTGq~I~VDVDGG~~~~~~l~el~~~l  918 (1878)
T 2uv9_A          869 -------RTFSQQEMAFNLLGLMAPAIVNLCQSDPVFADLNGGLQFIPDLKGLMTKL  918 (1878)
T ss_dssp             -------CCBCHHHHHHHHHHHHSHHHHHHHTTSCEEEEESCSGGGCTTHHHHHHHH
T ss_pred             -------CCCCHHHHHHHHHHHhCCcccccccCcEEEEEcCCCccccCCHHHHHHHH
Confidence                   24589999999998886432   223 55553  442  23455555444

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.29  E-value=5e-12  Score=128.12  Aligned_cols=205  Identities=14%  Similarity=0.044  Sum_probs=126.7

Q ss_pred             CCccEEEEecCcch-HHHHHHHHHHhCCCEEEEE-eCCCCcccc----cCCC----CCccccCcccccCcchHHhhcc--
Q 017977           48 ASQMTVSVTGATGF-IGRRLVQRLQADNHQVRVL-TRSRSKAEL----IFPG----KKTRFFPGVMIAEEPQWRDCIQ--  115 (363)
Q Consensus        48 ~~~~~vlVtGatG~-iG~~l~~~L~~~g~~V~~~-~r~~~~~~~----~~~~----~~~~~~~~~d~~~~~~~~~~~~--  115 (363)
                      ..+++++||||+|+ ||+++++.|+++|++|+++ .|+......    +...    ........+|+.|.+++.++++  
T Consensus       474 L~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~I  553 (1688)
T 2pff_A          474 FKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFI  553 (1688)
T ss_dssp             CCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHHH
T ss_pred             cCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHHH
Confidence            34568999999998 9999999999999999998 565544322    1111    1122244689999988876652  


Q ss_pred             -----------CCCEEEEccCCCCCC-C---CC--hhhHHHHHHHHHHHHHHHHHHH--HhC-C-CCCCCeEEEecccee
Q 017977          116 -----------GSTAVVNLAGTPIGT-R---WS--SEIKKEIKESRIRVTSKVVDLI--NES-P-EGVRPSVLELVKPKY  174 (363)
Q Consensus       116 -----------~~d~Vi~~a~~~~~~-~---~~--~~~~~~~~~~n~~~~~~l~~~~--~~~-~-~~~~~~v~~SS~~~~  174 (363)
                                 .+|+|||+||..... .   ..  .+..+..+++|+.++.++++++  ... . .+..++|++||.++.
T Consensus       554 ~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiAG~  633 (1688)
T 2pff_A          554 YDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGT  633 (1688)
T ss_dssp             HSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCTTT
T ss_pred             HHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChHhc
Confidence                       489999999975332 1   22  4566889999999999999987  321 1 122469999987443


Q ss_pred             cCCcccccccCCCcchhhhhhhcccchhhHHHHHHHHHHHhccCC--CceEEEEeeceEEeCCCCcccchHHHHHHHhCC
Q 017977          175 LMRAAHQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNK--DVRLALIRIGIVLGKDGGALAKMIPLFMMFAGG  252 (363)
Q Consensus       175 yg~~~~~e~~~~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~--~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~  252 (363)
                      ++         ....|..+          |.....+.........  .+.++.+.||.+.+..........       ..
T Consensus       634 ~G---------g~saYaAS----------KAAL~aLttrsLAeEla~~IRVNaVaPG~V~TT~M~~~~e~~-------~~  687 (1688)
T 2pff_A          634 FG---------GDGMYSES----------KLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSANNII-------AE  687 (1688)
T ss_dssp             SS---------CBTTHHHH----------HHHHTHHHHHTTTSSCTTTEECCCCCCCCCCCCSSSCTTTTC-------ST
T ss_pred             cC---------CchHHHHH----------HHHHHHHHHHHHHHHcCCCeEEEEEEECcCcCCcccCCchHH-------HH
Confidence            22         12244444          4222222122222211  489999999998853221100000       00


Q ss_pred             CCCCCCCccccccHHHHHHHHHHHhcCC
Q 017977          253 PLGSGQQWFSWIHLDDIVNLIYEALSNP  280 (363)
Q Consensus       253 ~~~~~~~~~~~i~v~D~a~a~~~~~~~~  280 (363)
                      ...  .....+...+|+|++++.++...
T Consensus       688 ~l~--~iplR~~sPEEVA~aIlFLaSd~  713 (1688)
T 2pff_A          688 GIE--KMGVRTFSQKEMAFNLLGLLTPE  713 (1688)
T ss_dssp             TTS--SSSCCCCCCCTTHHHHHHHTSTT
T ss_pred             HHH--hCCCCCCCHHHHHHHHHHHhCCC
Confidence            000  01112457899999999998765

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=99.26  E-value=2e-11  Score=110.50  Aligned_cols=210  Identities=9%  Similarity=-0.080  Sum_probs=122.8

Q ss_pred             CccEEEEecCcchHHHHHHHHHHh-CCCEEEEEeCCCCcccc----------------cCCCCCccccCcccccCcchHH
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQA-DNHQVRVLTRSRSKAEL----------------IFPGKKTRFFPGVMIAEEPQWR  111 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~----------------~~~~~~~~~~~~~d~~~~~~~~  111 (363)
                      .++++|||||++.||+++++.|++ .|++|++++|+......                ............+|+.|.+++.
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~  139 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARA  139 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHH
Confidence            457899999999999999999999 99999999998754332                1111222224467999887766


Q ss_pred             hhc--------cCCCEEEEccCCC-------------CCC------------------------CCChhhHHHHHHHHHH
Q 017977          112 DCI--------QGSTAVVNLAGTP-------------IGT------------------------RWSSEIKKEIKESRIR  146 (363)
Q Consensus       112 ~~~--------~~~d~Vi~~a~~~-------------~~~------------------------~~~~~~~~~~~~~n~~  146 (363)
                      +++        .++|++||+||.+             ...                        ..+.+..+..+++|..
T Consensus       140 ~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~~  219 (422)
T 3s8m_A          140 QVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGG  219 (422)
T ss_dssp             HHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhch
Confidence            544        4589999999862             111                        2355566777777777


Q ss_pred             HHH-HHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCC--CcchhhhhhhcccchhhHHHHHHHHHHHhccCCCc
Q 017977          147 VTS-KVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITW--LSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDV  221 (363)
Q Consensus       147 ~~~-~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~--~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~  221 (363)
                      +.. .+++++...  ..+..++|.+||.++..+       .+.  ...|..+|.+...++++       ....+. ..|+
T Consensus       220 ~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~-------~p~~~~~aY~ASKaAl~~lTrs-------LA~Ela-~~GI  284 (422)
T 3s8m_A          220 QDWELWIDALEGAGVLADGARSVAFSYIGTEIT-------WPIYWHGALGKAKVDLDRTAQR-------LNARLA-KHGG  284 (422)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGG-------HHHHTSHHHHHHHHHHHHHHHH-------HHHHHH-TTTC
T ss_pred             hHHHHHHHHHHHHHHhhCCCEEEEEeCchhhcc-------CCCccchHHHHHHHHHHHHHHH-------HHHHhC-ccCE
Confidence            654 566665431  112246999999843211       111  12344443332222211       111111 2499


Q ss_pred             eEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHHHHHhcCC
Q 017977          222 RLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNP  280 (363)
Q Consensus       222 ~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~  280 (363)
                      ++..+.||.+-.+....... .+........++.      ..-..+|+++++..++...
T Consensus       285 RVNaVaPG~i~T~~~~~ip~-~~~~~~~~~~~m~------r~G~pEdva~~v~~L~sd~  336 (422)
T 3s8m_A          285 GANVAVLKSVVTQASAAIPV-MPLYISMVYKIMK------EKGLHEGTIEQLDRLFRER  336 (422)
T ss_dssp             EEEEEEECCCCCTTGGGSTH-HHHHHHHHHHHHH------HTTCCCCHHHHHHHHHHHT
T ss_pred             EEEEEEcCCCcChhhhcCCC-ChHHHHHHHhhhc------CCcChHHHHHHHHHHhcch
Confidence            99999999998775322111 1111000000110      1223578999999888653

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.26  E-value=6.8e-12  Score=124.38  Aligned_cols=201  Identities=15%  Similarity=0.093  Sum_probs=132.8

Q ss_pred             CccEEEEecCcchHHHHHHHHHH-hCCC-EEEEEeCCCCcc---cc----cCCCCCccccCcccccCcchHHhhcc----
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQ-ADNH-QVRVLTRSRSKA---EL----IFPGKKTRFFPGVMIAEEPQWRDCIQ----  115 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~-~~g~-~V~~~~r~~~~~---~~----~~~~~~~~~~~~~d~~~~~~~~~~~~----  115 (363)
                      +.++++||||+|.||+.++++|+ ++|. +|++++|+....   ..    +...........+|+.|.+++.++++    
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~  608 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPD  608 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            45689999999999999999999 7998 699999984322   11    11122223355689999998888775    


Q ss_pred             --CCCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcch
Q 017977          116 --GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDY  190 (363)
Q Consensus       116 --~~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~  190 (363)
                        .+|+|||+||.....   ..+.+..+..+++|+.|+.++.+++..   .. +||++||.++..|       .+....|
T Consensus       609 ~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~---~l-~iV~~SS~ag~~g-------~~g~~~Y  677 (795)
T 3slk_A          609 EHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDP---DV-ALVLFSSVSGVLG-------SGGQGNY  677 (795)
T ss_dssp             TSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCT---TS-EEEEEEETHHHHT-------CSSCHHH
T ss_pred             hCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhh---CC-EEEEEccHHhcCC-------CCCCHHH
Confidence              369999999975442   345567788999999999999999854   33 7999999876555       3333455


Q ss_pred             hhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHH-HHHhCCCCCCCCCccccccHHHH
Q 017977          191 CAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDI  269 (363)
Q Consensus       191 ~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~  269 (363)
                      ..+          |.. .+.....+.. .|++++.|.||.+-+++..  ....... ......       ....+..++.
T Consensus       678 aAa----------ka~-~~alA~~~~~-~Gi~v~sI~pG~v~t~g~~--~~~~~~~~~~~~~~-------g~~~l~~~e~  736 (795)
T 3slk_A          678 AAA----------NSF-LDALAQQRQS-RGLPTRSLAWGPWAEHGMA--STLREAEQDRLARS-------GLLPISTEEG  736 (795)
T ss_dssp             HHH----------HHH-HHHHHHHHHH-TTCCEEEEEECCCSCCCHH--HHHHHHHHHHHHHT-------TBCCCCHHHH
T ss_pred             HHH----------HHH-HHHHHHHHHH-cCCeEEEEECCeECcchhh--ccccHHHHHHHHhc-------CCCCCCHHHH
Confidence            554          311 2222222222 3999999999988754321  1111101 111111       1235778888


Q ss_pred             HHHHHHHhcCCC
Q 017977          270 VNLIYEALSNPS  281 (363)
Q Consensus       270 a~a~~~~~~~~~  281 (363)
                      ..++..++..+.
T Consensus       737 ~~~~~~~l~~~~  748 (795)
T 3slk_A          737 LSQFDAACGGAH  748 (795)
T ss_dssp             HHHHHHHHTSSC
T ss_pred             HHHHHHHHhCCC
Confidence            888888887654

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.20  E-value=5.5e-11  Score=108.48  Aligned_cols=212  Identities=8%  Similarity=-0.095  Sum_probs=123.7

Q ss_pred             CCccEEEEecCcchHHHH--HHHHHHhCCCEEEEEeCCCCcccc------------c----CCCCCccccCcccccCcch
Q 017977           48 ASQMTVSVTGATGFIGRR--LVQRLQADNHQVRVLTRSRSKAEL------------I----FPGKKTRFFPGVMIAEEPQ  109 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~--l~~~L~~~g~~V~~~~r~~~~~~~------------~----~~~~~~~~~~~~d~~~~~~  109 (363)
                      ..++++|||||++.||++  ++..|.++|++|++++|+......            .    ...........+|+.|.++
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~  137 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNET  137 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHH
Confidence            456799999999999999  999999999999999997654211            0    1111112244689999887


Q ss_pred             HHhhcc-------CCCEEEEccCCC-------------CCC------------------------CCChhhHHHHHHHHH
Q 017977          110 WRDCIQ-------GSTAVVNLAGTP-------------IGT------------------------RWSSEIKKEIKESRI  145 (363)
Q Consensus       110 ~~~~~~-------~~d~Vi~~a~~~-------------~~~------------------------~~~~~~~~~~~~~n~  145 (363)
                      +.++++       .+|++||+||..             ...                        ....+..+..+++|.
T Consensus       138 v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn~  217 (418)
T 4eue_A          138 KDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVMG  217 (418)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhh
Confidence            776653       579999999873             111                        124555666777776


Q ss_pred             HHHH-HHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCC--cchhhhhhhcccchhhHHHHHHHHHHHhccCCC
Q 017977          146 RVTS-KVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWL--SDYCAKVYCLVSFNRGVLVCREWEGTALKVNKD  220 (363)
Q Consensus       146 ~~~~-~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~--~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~  220 (363)
                      .+.. .+++++...  .....++|.+||.++..+       .+..  ..|..+|.+...++++       ....+....|
T Consensus       218 ~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~-------~p~~~~~aY~ASKaAL~~ltrs-------LA~ELa~~~G  283 (418)
T 4eue_A          218 GEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRT-------YKIYREGTIGIAKKDLEDKAKL-------INEKLNRVIG  283 (418)
T ss_dssp             SHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGG-------TTTTTTSHHHHHHHHHHHHHHH-------HHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCC-------CCccccHHHHHHHHHHHHHHHH-------HHHHhCCccC
Confidence            6554 556665541  011245889998843111       1222  3455554433333221       1111111038


Q ss_pred             ceEEEEeeceEEeCCCCcc---cchHHH-HHHHhCCCCCCCCCccccccHHHHHHHHHHHhcCCCCCc
Q 017977          221 VRLALIRIGIVLGKDGGAL---AKMIPL-FMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRG  284 (363)
Q Consensus       221 ~~~~ilRp~~v~g~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~g  284 (363)
                      +++.++.||.|-.+.....   ...... ....+.           .-..+|+++++..++...-..|
T Consensus       284 IrVN~V~PG~v~T~~s~~ip~~p~y~~~~~~~mk~-----------~G~~E~v~e~~~~L~sd~~~~g  340 (418)
T 4eue_A          284 GRAFVSVNKALVTKASAYIPTFPLYAAILYKVMKE-----------KNIHENCIMQIERMFSEKIYSN  340 (418)
T ss_dssp             CEEEEEECCCCCCHHHHTSTTHHHHHHHHHHHHHH-----------TTCCCCHHHHHHHHHHHTTSSS
T ss_pred             eEEEEEECCcCcChhhhcCCCCcHHHHHHHHHHhh-----------cCChHHHHHHHHHHhhccccCC
Confidence            9999999999876532111   011111 111110           1225788999988887644444

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=99.18  E-value=2.2e-11  Score=91.56  Aligned_cols=94  Identities=18%  Similarity=0.157  Sum_probs=72.3

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCC-CEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCCC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  127 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~~  127 (363)
                      ++|+|+|+|+ |++|+.+++.|.+.| ++|++++|++.+........  .....+|+.+.+.+.+.++++|+|||+++..
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~~~d~vi~~~~~~   80 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMG--VATKQVDAKDEAGLAKALGGFDAVISAAPFF   80 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTT--CEEEECCTTCHHHHHHHTTTCSEEEECSCGG
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCC--CcEEEecCCCHHHHHHHHcCCCEEEECCCch
Confidence            3579999999 999999999999999 99999999887655443111  1134568888889999999999999998631


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeE
Q 017977          128 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSV  166 (363)
Q Consensus       128 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v  166 (363)
                                         ...++++++.+  .+++.+.
T Consensus        81 -------------------~~~~~~~~~~~--~g~~~~~   98 (118)
T 3ic5_A           81 -------------------LTPIIAKAAKA--AGAHYFD   98 (118)
T ss_dssp             -------------------GHHHHHHHHHH--TTCEEEC
T ss_pred             -------------------hhHHHHHHHHH--hCCCEEE
Confidence                               12478888888  6776433

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=99.12  E-value=1e-10  Score=103.96  Aligned_cols=115  Identities=15%  Similarity=0.151  Sum_probs=82.4

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCC--CEEEEEeCCCCccc--ccCCCCCccccCccc-ccCcchHHhhccCCCEEEEc
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAE--LIFPGKKTRFFPGVM-IAEEPQWRDCIQGSTAVVNL  123 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~--~~~~~~~~~~~~~~d-~~~~~~~~~~~~~~d~Vi~~  123 (363)
                      ++|||+||||+|++|..++..|++.|  ++|+++++++....  .+.....   ...+. +.+.+++.++++++|+|||+
T Consensus         7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~~~~~dL~~~~~---~~~v~~~~~t~d~~~al~gaDvVi~~   83 (326)
T 1smk_A            7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDT---GAVVRGFLGQQQLEAALTGMDLIIVP   83 (326)
T ss_dssp             -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHHHHHHHHHTSCS---SCEEEEEESHHHHHHHHTTCSEEEEC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcHhHHHHhhcccc---cceEEEEeCCCCHHHHcCCCCEEEEc
Confidence            34799999999999999999999998  89999998765211  1111100   00111 12245678889999999999


Q ss_pred             cCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEecc
Q 017977          124 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVK  171 (363)
Q Consensus       124 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~  171 (363)
                      |+.+.....   ...++...|+.+++++++++.+  .+.+.+|+++|-
T Consensus        84 ag~~~~~g~---~r~dl~~~N~~~~~~i~~~i~~--~~p~~~viv~SN  126 (326)
T 1smk_A           84 AGVPRKPGM---TRDDLFKINAGIVKTLCEGIAK--CCPRAIVNLISN  126 (326)
T ss_dssp             CCCCCCSSC---CCSHHHHHHHHHHHHHHHHHHH--HCTTSEEEECCS
T ss_pred             CCcCCCCCC---CHHHHHHHHHHHHHHHHHHHHh--hCCCeEEEEECC
Confidence            997533221   2346788999999999999999  677778888764

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=99.06  E-value=3.4e-10  Score=100.82  Aligned_cols=113  Identities=15%  Similarity=0.135  Sum_probs=82.4

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCC-------EEEEEeCC----CCccc----ccCCCCCccccCcccccCcchHHhhc
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNH-------QVRVLTRS----RSKAE----LIFPGKKTRFFPGVMIAEEPQWRDCI  114 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~----~~~~~----~~~~~~~~~~~~~~d~~~~~~~~~~~  114 (363)
                      +|||+||||+||+|++++..|+..|+       +|.+++++    ..+..    .+.....  .+ ..++....++.+++
T Consensus         5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~--~~-~~~i~~~~~~~~al   81 (329)
T 1b8p_A            5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAF--PL-LAGMTAHADPMTAF   81 (329)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTC--TT-EEEEEEESSHHHHT
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcc--cc-cCcEEEecCcHHHh
Confidence            47999999999999999999999885       89999887    32121    1111100  02 13566667788899


Q ss_pred             cCCCEEEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCC-CC-CeEEEec
Q 017977          115 QGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEG-VR-PSVLELV  170 (363)
Q Consensus       115 ~~~d~Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~-~~v~~SS  170 (363)
                      +++|+|||+|+.+..   ......+++..|+..++++++++.+  .. .+ ++|++|.
T Consensus        82 ~~aD~Vi~~ag~~~~---~g~~r~dl~~~N~~i~~~i~~~i~~--~~~p~a~ii~~SN  134 (329)
T 1b8p_A           82 KDADVALLVGARPRG---PGMERKDLLEANAQIFTVQGKAIDA--VASRNIKVLVVGN  134 (329)
T ss_dssp             TTCSEEEECCCCCCC---TTCCHHHHHHHHHHHHHHHHHHHHH--HSCTTCEEEECSS
T ss_pred             CCCCEEEEeCCCCCC---CCCCHHHHHHHHHHHHHHHHHHHHH--hcCCCeEEEEccC
Confidence            999999999997532   2223567889999999999999999  43 44 5777765

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=99.05  E-value=5.3e-10  Score=98.87  Aligned_cols=114  Identities=19%  Similarity=0.248  Sum_probs=80.8

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCC--EEEEEeC--CCCcccc----cCCCCCccccCcccccCcc-hHHhhccCCCEEE
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNH--QVRVLTR--SRSKAEL----IFPGKKTRFFPGVMIAEEP-QWRDCIQGSTAVV  121 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r--~~~~~~~----~~~~~~~~~~~~~d~~~~~-~~~~~~~~~d~Vi  121 (363)
                      |||+||||+||+|++++..|+..|.  ++..+++  +..+...    +..... .....+++.+.+ ++.++++++|+||
T Consensus         1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~-~~~~~~~i~~~~d~l~~al~gaD~Vi   79 (313)
T 1hye_A            1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALA-GTRSDANIYVESDENLRIIDESDVVI   79 (313)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHT-TSCCCCEEEEEETTCGGGGTTCSEEE
T ss_pred             CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHH-hcCCCeEEEeCCcchHHHhCCCCEEE
Confidence            5899999999999999999998874  6888887  4321110    100000 001234555433 4778899999999


Q ss_pred             EccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEecc
Q 017977          122 NLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVK  171 (363)
Q Consensus       122 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~  171 (363)
                      |+|+.+...   .....+++..|+.+++++++++.+  .+ +.+|+++|-
T Consensus        80 ~~Ag~~~~~---g~~r~dl~~~N~~i~~~i~~~i~~--~~-~~~vlv~SN  123 (313)
T 1hye_A           80 ITSGVPRKE---GMSRMDLAKTNAKIVGKYAKKIAE--IC-DTKIFVITN  123 (313)
T ss_dssp             ECCSCCCCT---TCCHHHHHHHHHHHHHHHHHHHHH--HC-CCEEEECSS
T ss_pred             ECCCCCCCC---CCcHHHHHHHHHHHHHHHHHHHHH--hC-CeEEEEecC
Confidence            999975322   223467899999999999999999  66 778887765

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=99.01  E-value=7.2e-10  Score=97.49  Aligned_cols=114  Identities=15%  Similarity=0.161  Sum_probs=77.1

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCC--EEEEEeC--CCCcccccCCCCCcc--ccCcccccCcchHHhhccCCCEEEEcc
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNH--QVRVLTR--SRSKAELIFPGKKTR--FFPGVMIAEEPQWRDCIQGSTAVVNLA  124 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r--~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~~~d~Vi~~a  124 (363)
                      |||+||||+|++|++++..|+..|+  ++..+++  +..+.+.........  ......+.. +. .++++++|+|||+|
T Consensus         1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~~-~~a~~~aDvVi~~a   78 (303)
T 1o6z_A            1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-GG-YEDTAGSDVVVITA   78 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-CC-GGGGTTCSEEEECC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-CC-HHHhCCCCEEEEcC
Confidence            6899999999999999999998875  6888887  443211100000000  000112211 22 56689999999999


Q ss_pred             CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEecc
Q 017977          125 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVK  171 (363)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~  171 (363)
                      +.+...   .....+++..|+.+++++++++.+  .+.+.+|+++|-
T Consensus        79 g~~~~~---g~~r~dl~~~N~~i~~~i~~~i~~--~~p~~~viv~SN  120 (303)
T 1o6z_A           79 GIPRQP---GQTRIDLAGDNAPIMEDIQSSLDE--HNDDYISLTTSN  120 (303)
T ss_dssp             CCCCCT---TCCHHHHHHHHHHHHHHHHHHHHT--TCSCCEEEECCS
T ss_pred             CCCCCC---CCCHHHHHHHHHHHHHHHHHHHHH--HCCCcEEEEeCC
Confidence            975322   223457789999999999999999  677778888754

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=98.93  E-value=1.1e-09  Score=120.07  Aligned_cols=165  Identities=14%  Similarity=0.027  Sum_probs=103.8

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCE-EEEEeCCCCccc-------ccCCCCCccccCcccccCcchHHhhcc-----
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQ-VRVLTRSRSKAE-------LIFPGKKTRFFPGVMIAEEPQWRDCIQ-----  115 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~-------~~~~~~~~~~~~~~d~~~~~~~~~~~~-----  115 (363)
                      ..++++||||+|.||+++++.|+++|++ |++++|+..+..       .+...........+|+.|.+++.++++     
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~ 1962 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQL 1962 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHhc
Confidence            4568999999999999999999999986 888888865431       111112222345689999888876654     


Q ss_pred             -CCCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchh
Q 017977          116 -GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYC  191 (363)
Q Consensus       116 -~~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~  191 (363)
                       .+|+|||+||.....   ..+.+..+..+++|+.|+.++.+++........+||++||.++..|       .+....|.
T Consensus      1963 g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~g-------~~g~~~Y~ 2035 (2512)
T 2vz8_A         1963 GPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGRG-------NAGQANYG 2035 (2512)
T ss_dssp             SCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHTT-------CTTCHHHH
T ss_pred             CCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcCC-------CCCcHHHH
Confidence             589999999974332   2234556778899999999998887653123367999999865444       22233455


Q ss_pred             hhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEE
Q 017977          192 AKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVL  232 (363)
Q Consensus       192 ~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~  232 (363)
                      .+          |. .........+.. |++...+..+.+-
T Consensus      2036 aa----------Ka-al~~l~~~rr~~-Gl~~~a~~~g~~~ 2064 (2512)
T 2vz8_A         2036 FA----------NS-AMERICEKRRHD-GLPGLAVQWGAIG 2064 (2512)
T ss_dssp             HH----------HH-HHHHHHHHHHHT-TSCCCEEEECCBC
T ss_pred             HH----------HH-HHHHHHHHHHHC-CCcEEEEEccCcC
Confidence            44          31 222222222232 8888888877653

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=98.79  E-value=1e-07  Score=105.01  Aligned_cols=232  Identities=13%  Similarity=0.049  Sum_probs=131.4

Q ss_pred             CCccEEEEecCcch-HHHHHHHHHHhCCCEEEEEeCCCCc-----cccc----CCCCCccccCcccccCcchHHhhc---
Q 017977           48 ASQMTVSVTGATGF-IGRRLVQRLQADNHQVRVLTRSRSK-----AELI----FPGKKTRFFPGVMIAEEPQWRDCI---  114 (363)
Q Consensus        48 ~~~~~vlVtGatG~-iG~~l~~~L~~~g~~V~~~~r~~~~-----~~~~----~~~~~~~~~~~~d~~~~~~~~~~~---  114 (363)
                      ..+++++||||++. ||+++++.|+++|.+|++++|+...     .+.+    ...........+|+.|.+++++++   
T Consensus      2134 l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~i 2213 (3089)
T 3zen_D         2134 XXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEWV 2213 (3089)
T ss_dssp             CCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHHH
Confidence            45678999999999 9999999999999999999998765     2222    111222223458999988776653   


Q ss_pred             --------cCCCEEEEccCCC----CC----CCCC----hhhHHHHHHHHHHHHHHHHHHHHhC--CCCCC-C--eEEEe
Q 017977          115 --------QGSTAVVNLAGTP----IG----TRWS----SEIKKEIKESRIRVTSKVVDLINES--PEGVR-P--SVLEL  169 (363)
Q Consensus       115 --------~~~d~Vi~~a~~~----~~----~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~-~--~v~~S  169 (363)
                              .++|++|||||..    ..    ....    ....+..+++|+.++..++.++...  ..+.. .  +|...
T Consensus      2214 ~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~~~ 2293 (3089)
T 3zen_D         2214 GTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVLPG 2293 (3089)
T ss_dssp             TSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEEEE
T ss_pred             HhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEEC
Confidence                    2479999999961    00    0001    1123455889999988877776542  02221 1  22222


Q ss_pred             ccceecCCcccccccCCCcchhhhhhhcccchhhHHHHHHHHHHHhc--cCCCceEEEEeeceEEeCCCCcccchHHHHH
Q 017977          170 VKPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALK--VNKDVRLALIRIGIVLGKDGGALAKMIPLFM  247 (363)
Q Consensus       170 S~~~~yg~~~~~e~~~~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~--~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~  247 (363)
                      |.  ..+      ..+....|..+|.+...++         .....+  ...++.++.+.||.+-+............. 
T Consensus      2294 ss--~~g------~~g~~~aYsASKaAl~~Lt---------rslA~E~~~a~~IrVn~v~PG~v~tT~l~~~~~~~~~~- 2355 (3089)
T 3zen_D         2294 SP--NRG------MFGGDGAYGEAKSALDALE---------NRWSAEKSWAERVSLAHALIGWTKGTGLMGQNDAIVSA- 2355 (3089)
T ss_dssp             CS--STT------SCSSCSSHHHHGGGHHHHH---------HHHHHCSTTTTTEEEEEEECCCEECSTTTTTTTTTHHH-
T ss_pred             Cc--ccc------cCCCchHHHHHHHHHHHHH---------HHHHhccccCCCeEEEEEeecccCCCcccccchhHHHH-
Confidence            21  111      0111225666654432222         222222  223799999999999854321111111111 


Q ss_pred             HHhCCCCCCCCCccccccHHHHHHHHHHHhcCCC---CCc-e--EEeeCCC---CcCHHHHHHHHHH
Q 017977          248 MFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS---YRG-V--INGTAPN---PVRLAEMCDHLGN  305 (363)
Q Consensus       248 ~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~---~~g-~--~~i~~~~---~~s~~el~~~i~~  305 (363)
                       ....+       ......+|+|.+++.++....   ..+ .  ..+.++-   ...+.++...+++
T Consensus      2356 -~~~~~-------~r~~~PeEIA~avlfLaS~~a~~~~~~~p~~vdl~GG~~~~~~~~~~~~~~~~~ 2414 (3089)
T 3zen_D         2356 -VEEAG-------VTTYTTDEMAAMLLDLCTVETKVAAAGAPVKVDLTGGLGDIKIDMAELAAKARE 2414 (3089)
T ss_dssp             -HGGGS-------CBCEEHHHHHHHHHHTTSHHHHHHHHHSCEEEECSBSCSSCCCCHHHHTHHHHH
T ss_pred             -HHhcC-------CCCCCHHHHHHHHHHHhChhhhhHhcCCeEEEEcCCCcCcCCCCHHHHHHHHHH
Confidence             11111       112389999999999886432   122 2  3333543   3578888876644

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.71  E-value=1.8e-08  Score=93.49  Aligned_cols=107  Identities=14%  Similarity=0.211  Sum_probs=75.1

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCCCCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIG  129 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~~~~  129 (363)
                      +++|+|+| +|++|+++++.|++.|++|++++|+..+...+...........+|+.|.+++.++++++|+|||+++....
T Consensus         3 ~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~~~~~   81 (450)
T 1ff9_A            3 TKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPYTFH   81 (450)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECCC--CH
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEECCccccc
Confidence            46899998 79999999999999999999999987665554432211113346888888888889999999999986311


Q ss_pred             CCCChhhHHHHHHH--HH-------HHHHHHHHHHHhCCCCCC
Q 017977          130 TRWSSEIKKEIKES--RI-------RVTSKVVDLINESPEGVR  163 (363)
Q Consensus       130 ~~~~~~~~~~~~~~--n~-------~~~~~l~~~~~~~~~~~~  163 (363)
                          .......++.  |+       ..+.++++++++  .+++
T Consensus        82 ----~~i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~--aGv~  118 (450)
T 1ff9_A           82 ----ATVIKSAIRQKKHVVTTSYVSPAMMELDQAAKD--AGIT  118 (450)
T ss_dssp             ----HHHHHHHHHHTCEEEESSCCCHHHHHTHHHHHH--TTCE
T ss_pred             ----hHHHHHHHhCCCeEEEeecccHHHHHHHHHHHH--CCCe
Confidence                1112222222  22       356789999998  6654

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.67  E-value=4.9e-08  Score=75.72  Aligned_cols=74  Identities=19%  Similarity=0.173  Sum_probs=55.9

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhh-ccCCCEEEEccCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC-IQGSTAVVNLAGT  126 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~d~Vi~~a~~  126 (363)
                      +++|+|+|+ |.+|+.+++.|.+.|++|++++|++...+.......  .....|..+.+.+.++ +.++|+||++++.
T Consensus         6 ~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~~~--~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~   80 (144)
T 2hmt_A            6 NKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYAT--HAVIANATEENELLSLGIRNFEYVIVAIGA   80 (144)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTTCS--EEEECCTTCHHHHHTTTGGGCSEEEECCCS
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCC--EEEEeCCCCHHHHHhcCCCCCCEEEECCCC
Confidence            457999998 999999999999999999999998765544433211  1223466666667665 6789999999874

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=98.66  E-value=1e-08  Score=89.68  Aligned_cols=78  Identities=17%  Similarity=0.167  Sum_probs=61.1

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCC---CccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK---KTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      .+++++||||+|++|++++..|++.|++|++++|+..+.+.+....   .......+|+.+.+++.++++++|+|||+++
T Consensus       118 ~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~DvlVn~ag  197 (287)
T 1lu9_A          118 KGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTAGA  197 (287)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEECCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHhCCEEEECCC
Confidence            4579999999999999999999999999999999875543321110   0011345788888899999999999999998


Q ss_pred             C
Q 017977          126 T  126 (363)
Q Consensus       126 ~  126 (363)
                      .
T Consensus       198 ~  198 (287)
T 1lu9_A          198 I  198 (287)
T ss_dssp             T
T ss_pred             c
Confidence            5

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=98.61  E-value=9.8e-08  Score=84.19  Aligned_cols=109  Identities=17%  Similarity=0.202  Sum_probs=76.7

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCC--CEEEEEeCCCCccc--ccCCCCCccccCcccccC---cchHHhhccCCCEEEEc
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAE--LIFPGKKTRFFPGVMIAE---EPQWRDCIQGSTAVVNL  123 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~--~~~~~~~~~~~~~~d~~~---~~~~~~~~~~~d~Vi~~  123 (363)
                      |||.|+||+|++|..++..|+..|  .+|.++++++....  .+...     ....++..   .++++++++++|+||++
T Consensus         1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~~~a~dL~~~-----~~~~~l~~~~~t~d~~~a~~~aDvVvi~   75 (314)
T 1mld_A            1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHI-----ETRATVKGYLGPEQLPDCLKGCDVVVIP   75 (314)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTS-----SSSCEEEEEESGGGHHHHHTTCSEEEEC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCccHHHHHHHhcc-----CcCceEEEecCCCCHHHHhCCCCEEEEC
Confidence            589999999999999999999888  79999999872211  11111     11123332   24688889999999999


Q ss_pred             cCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCC-CeEEEe
Q 017977          124 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVR-PSVLEL  169 (363)
Q Consensus       124 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~v~~S  169 (363)
                      ++.+.....   ...+.+..|+...+.+++.+.+  .... .++++|
T Consensus        76 ag~~~~~g~---~r~dl~~~n~~i~~~i~~~i~~--~~p~a~viv~s  117 (314)
T 1mld_A           76 AGVPRKPGM---TRDDLFNTNATIVATLTAACAQ--HCPDAMICIIS  117 (314)
T ss_dssp             CSCCCCTTC---CGGGGHHHHHHHHHHHHHHHHH--HCTTSEEEECS
T ss_pred             CCcCCCCCC---cHHHHHHHHHHHHHHHHHHHHh--hCCCeEEEEEC
Confidence            997543221   2345678999999999999998  3333 344443

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=98.55  E-value=7.3e-08  Score=87.22  Aligned_cols=75  Identities=17%  Similarity=0.140  Sum_probs=59.7

Q ss_pred             CCCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           47 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        47 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      ....|||+|+|| |++|+.+++.|.+ .++|.+.+|+....+.......   ...+|+.|.+++.++++++|+||++++.
T Consensus        13 ~g~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~~~~---~~~~d~~d~~~l~~~~~~~DvVi~~~p~   87 (365)
T 3abi_A           13 EGRHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKEFAT---PLKVDASNFDKLVEVMKEFELVIGALPG   87 (365)
T ss_dssp             ---CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTTTSE---EEECCTTCHHHHHHHHTTCSEEEECCCG
T ss_pred             cCCccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhccCC---cEEEecCCHHHHHHHHhCCCEEEEecCC
Confidence            344579999998 9999999998865 5899999998877666544322   3457899999999999999999999864

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.52  E-value=2.4e-07  Score=76.98  Aligned_cols=70  Identities=20%  Similarity=0.312  Sum_probs=51.4

Q ss_pred             ccEEEEecC----------------cchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHH--
Q 017977           50 QMTVSVTGA----------------TGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWR--  111 (363)
Q Consensus        50 ~~~vlVtGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~--  111 (363)
                      +|+||||||                ||++|.+++++|+++|++|+.+.|........        ..++++.+.++..  
T Consensus         3 gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~~~--------~~~~~~~~v~s~~em   74 (232)
T 2gk4_A            3 AMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKPEP--------HPNLSIREITNTKDL   74 (232)
T ss_dssp             CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCCCC--------CTTEEEEECCSHHHH
T ss_pred             CCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccccC--------CCCeEEEEHhHHHHH
Confidence            579999999                99999999999999999999999976422110        1124444443332  


Q ss_pred             -----hhccCCCEEEEccCCC
Q 017977          112 -----DCIQGSTAVVNLAGTP  127 (363)
Q Consensus       112 -----~~~~~~d~Vi~~a~~~  127 (363)
                           +.+.++|++||+|+..
T Consensus        75 ~~~v~~~~~~~Dili~aAAvs   95 (232)
T 2gk4_A           75 LIEMQERVQDYQVLIHSMAVS   95 (232)
T ss_dssp             HHHHHHHGGGCSEEEECSBCC
T ss_pred             HHHHHHhcCCCCEEEEcCccc
Confidence                 3345799999999973

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.51  E-value=3e-07  Score=70.89  Aligned_cols=75  Identities=13%  Similarity=0.237  Sum_probs=53.0

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhh-ccCCCEEEEccCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC-IQGSTAVVNLAGT  126 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~d~Vi~~a~~  126 (363)
                      .|+|+|+|+ |++|+.+++.|.+.|++|++++|++.....+...... .....|..+.+.+.+. ++++|+||++...
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~-~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~   79 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDA-LVINGDCTKIKTLEDAGIEDADMYIAVTGK   79 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSS-EEEESCTTSHHHHHHTTTTTCSEEEECCSC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCc-EEEEcCCCCHHHHHHcCcccCCEEEEeeCC
Confidence            479999996 9999999999999999999999987654433211010 0123455566656544 6789999999753

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=98.51  E-value=6.3e-08  Score=85.82  Aligned_cols=112  Identities=10%  Similarity=0.072  Sum_probs=76.4

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCC--E-----EEEEeCCCC--cc----cccCCCCCccccCcccccCcchHHhhccC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNH--Q-----VRVLTRSRS--KA----ELIFPGKKTRFFPGVMIAEEPQWRDCIQG  116 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~--~-----V~~~~r~~~--~~----~~~~~~~~~~~~~~~d~~~~~~~~~~~~~  116 (363)
                      .|||+||||+|+||++++..|+..|.  +     +.+++++..  ..    ..+.....  .+. .++...+...+.+++
T Consensus         3 ~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~--~~~-~~~~~~~~~~~~~~d   79 (333)
T 5mdh_A            3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCAL--PLL-KDVIATDKEEIAFKD   79 (333)
T ss_dssp             CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCC--TTE-EEEEEESCHHHHTTT
T ss_pred             CeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhh--ccc-CCEEEcCCcHHHhCC
Confidence            37999999999999999999998764  4     888888642  11    11111000  011 133333456677999


Q ss_pred             CCEEEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCC--eEEEe
Q 017977          117 STAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRP--SVLEL  169 (363)
Q Consensus       117 ~d~Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--~v~~S  169 (363)
                      +|+||++||.+...   .....+.++.|+...+++++++.+  .+.+.  ++.+|
T Consensus        80 aDvVvitAg~prkp---G~tR~dll~~N~~i~~~i~~~i~~--~~~~~~~vivvs  129 (333)
T 5mdh_A           80 LDVAILVGSMPRRD---GMERKDLLKANVKIFKCQGAALDK--YAKKSVKVIVVG  129 (333)
T ss_dssp             CSEEEECCSCCCCT---TCCTTTTHHHHHHHHHHHHHHHHH--HSCTTCEEEECS
T ss_pred             CCEEEEeCCCCCCC---CCCHHHHHHHHHHHHHHHHHHHHH--hCCCCeEEEEcC
Confidence            99999999875322   223467889999999999999999  55543  55555

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=98.49  E-value=1.3e-07  Score=83.93  Aligned_cols=104  Identities=13%  Similarity=0.234  Sum_probs=72.7

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCC--CEEEEEeCCCCcccc----cCCCCCccccCcccccCcchHHhhccCCCEEE
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAEL----IFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVV  121 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~----~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi  121 (363)
                      +++|||.|+|++|++|+.++..|+..|  .+|.+++++..+...    +....    +...++.-..++.++++++|+||
T Consensus         6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~----~~~~~i~~t~d~~~al~dADvVv   81 (343)
T 3fi9_A            6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCG----FEGLNLTFTSDIKEALTDAKYIV   81 (343)
T ss_dssp             SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHC----CTTCCCEEESCHHHHHTTEEEEE
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCc----CCCCceEEcCCHHHHhCCCCEEE
Confidence            445799999999999999999999988  589999987653221    11100    11122322345677899999999


Q ss_pred             EccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhC
Q 017977          122 NLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES  158 (363)
Q Consensus       122 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  158 (363)
                      .+||.+..   ......+.+..|+...+.+++.+.+.
T Consensus        82 itaG~p~k---pG~~R~dLl~~N~~I~~~i~~~i~~~  115 (343)
T 3fi9_A           82 SSGGAPRK---EGMTREDLLKGNAEIAAQLGKDIKSY  115 (343)
T ss_dssp             ECCC----------CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EccCCCCC---CCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence            99997522   22335678899999999999999983

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.48  E-value=2.6e-07  Score=71.52  Aligned_cols=74  Identities=23%  Similarity=0.230  Sum_probs=56.7

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhh-ccCCCEEEEccC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC-IQGSTAVVNLAG  125 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~d~Vi~~a~  125 (363)
                      .|++|+|+|+ |++|+++++.|.+.|++|+++++++...+......  .....+|..+.+.+.++ ++++|+||.+.+
T Consensus         5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~--~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~   79 (141)
T 3llv_A            5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEG--FDAVIADPTDESFYRSLDLEGVSAVLITGS   79 (141)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTT--CEEEECCTTCHHHHHHSCCTTCSEEEECCS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCC--CcEEECCCCCHHHHHhCCcccCCEEEEecC
Confidence            3568999997 99999999999999999999999887655443221  11334688888877765 568999998775

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.43  E-value=7.4e-08  Score=88.24  Aligned_cols=76  Identities=18%  Similarity=0.170  Sum_probs=58.7

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCC---CEEEEEeCCCCcccccCCCC-----CccccCcccccCcchHHhhccC--CCE
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADN---HQVRVLTRSRSKAELIFPGK-----KTRFFPGVMIAEEPQWRDCIQG--STA  119 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~d~~~~~~~~~~~~~--~d~  119 (363)
                      ||+|+|+|| |++|+.+++.|++.|   .+|.+++|+.++.+.+....     .......+|+.|.+++.+++++  +|+
T Consensus         1 M~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~Dv   79 (405)
T 4ina_A            1 MAKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQI   79 (405)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCE
Confidence            479999998 999999999999998   39999999887654432110     0112345788889999999987  899


Q ss_pred             EEEccCC
Q 017977          120 VVNLAGT  126 (363)
Q Consensus       120 Vi~~a~~  126 (363)
                      |||+++.
T Consensus        80 Vin~ag~   86 (405)
T 4ina_A           80 VLNIALP   86 (405)
T ss_dssp             EEECSCG
T ss_pred             EEECCCc
Confidence            9999974

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=98.34  E-value=5.6e-06  Score=65.04  Aligned_cols=76  Identities=13%  Similarity=0.156  Sum_probs=55.5

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhh-ccCCCEEEEccCC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC-IQGSTAVVNLAGT  126 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~d~Vi~~a~~  126 (363)
                      ..++|+|+|+ |.+|+.+++.|.+.|++|++++|++.....+....... ....|..+.+.+.++ +.++|+||.+.+.
T Consensus        18 ~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~-~~~~d~~~~~~l~~~~~~~ad~Vi~~~~~   94 (155)
T 2g1u_A           18 KSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGF-TVVGDAAEFETLKECGMEKADMVFAFTND   94 (155)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSE-EEESCTTSHHHHHTTTGGGCSEEEECSSC
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCc-EEEecCCCHHHHHHcCcccCCEEEEEeCC
Confidence            3469999995 99999999999999999999999987766554111110 122355555556654 6789999988764

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=98.34  E-value=1.2e-06  Score=72.71  Aligned_cols=72  Identities=13%  Similarity=0.185  Sum_probs=51.3

Q ss_pred             CccEEEEecC----------------cchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHh
Q 017977           49 SQMTVSVTGA----------------TGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRD  112 (363)
Q Consensus        49 ~~~~vlVtGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~  112 (363)
                      .+++||||||                ||.+|.+++++|+++|++|++++++... ..  .. .   ...+|+.+.+++.+
T Consensus         7 ~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~l-~~--~~-g---~~~~dv~~~~~~~~   79 (226)
T 1u7z_A            7 KHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL-PT--PP-F---VKRVDVMTALEMEA   79 (226)
T ss_dssp             TTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC-CC--CT-T---EEEEECCSHHHHHH
T ss_pred             CCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCccc-cc--CC-C---CeEEccCcHHHHHH
Confidence            4579999999                6999999999999999999999886521 11  11 0   12245555443332


Q ss_pred             ----hccCCCEEEEccCCC
Q 017977          113 ----CIQGSTAVVNLAGTP  127 (363)
Q Consensus       113 ----~~~~~d~Vi~~a~~~  127 (363)
                          .+.++|++||+||..
T Consensus        80 ~v~~~~~~~Dili~~Aav~   98 (226)
T 1u7z_A           80 AVNASVQQQNIFIGCAAVA   98 (226)
T ss_dssp             HHHHHGGGCSEEEECCBCC
T ss_pred             HHHHhcCCCCEEEECCccc
Confidence                345799999999974

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.27  E-value=3e-07  Score=85.38  Aligned_cols=76  Identities=16%  Similarity=0.265  Sum_probs=58.7

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhC-CCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      .+++|+|+|+ |++|+.++..|++. |++|++++|+.++...+..... .....+|+.|.+++.++++++|+|||+++.
T Consensus        22 ~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~-~~~~~~D~~d~~~l~~~l~~~DvVIn~tp~   98 (467)
T 2axq_A           22 MGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSG-SKAISLDVTDDSALDKVLADNDVVISLIPY   98 (467)
T ss_dssp             -CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGT-CEEEECCTTCHHHHHHHHHTSSEEEECSCG
T ss_pred             CCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcC-CcEEEEecCCHHHHHHHHcCCCEEEECCch
Confidence            4578999997 99999999999998 7899999998766544322111 112346787888888889999999999875

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=98.17  E-value=4.2e-06  Score=73.62  Aligned_cols=114  Identities=13%  Similarity=0.150  Sum_probs=72.4

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCC-EEEEEeCCCCcccccCCCCCcc---ccCcccccCcchHHhhccCCCEEEEccC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTR---FFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      +|||.|+|| |.+|..++..|+..|+ +|.++++++.+.+.........   ......+....++ +.++++|+||.+++
T Consensus         2 ~~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~aD~Vi~a~g   79 (309)
T 1ur5_A            2 RKKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY-ADTANSDVIVVTSG   79 (309)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-GGGTTCSEEEECCC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCCH-HHHCCCCEEEEcCC
Confidence            369999998 9999999999999997 9999998875443211000000   0001122222334 66899999999998


Q ss_pred             CCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEec
Q 017977          126 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELV  170 (363)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS  170 (363)
                      .+...   .....+....|....+.+++.+.+  .....++++.|
T Consensus        80 ~p~~~---g~~r~dl~~~n~~i~~~i~~~i~~--~~p~a~vi~~t  119 (309)
T 1ur5_A           80 APRKP---GMSREDLIKVNADITRACISQAAP--LSPNAVIIMVN  119 (309)
T ss_dssp             C-----------CHHHHHHHHHHHHHHHHHGG--GCTTCEEEECC
T ss_pred             CCCCC---CCCHHHHHHHHHHHHHHHHHHHHh--hCCCeEEEEcC
Confidence            75321   112345677888888999999998  44555655543

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=98.15  E-value=7.3e-06  Score=72.29  Aligned_cols=111  Identities=21%  Similarity=0.243  Sum_probs=75.0

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCC--EEEEEeCCCCcccc----cCCCCCcccc-CcccccCcchHHhhccCCCEEE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAEL----IFPGKKTRFF-PGVMIAEEPQWRDCIQGSTAVV  121 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~----~~~~~~~~~~-~~~d~~~~~~~~~~~~~~d~Vi  121 (363)
                      .+|||.|+|+ |.+|..++..|+..|.  +|.+++++..+.+.    +.....  .. ..+.+.. +. .+.++++|+||
T Consensus         4 ~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~--~~~~~v~i~~-~~-~~a~~~aDvVv   78 (326)
T 3pqe_A            4 HVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKA--FAPQPVKTSY-GT-YEDCKDADIVC   78 (326)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGG--GSSSCCEEEE-EC-GGGGTTCSEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccc--cccCCeEEEe-Cc-HHHhCCCCEEE
Confidence            3579999996 9999999999999886  99999997654322    111100  00 1122221 12 25688999999


Q ss_pred             EccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEe
Q 017977          122 NLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLEL  169 (363)
Q Consensus       122 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~S  169 (363)
                      .++|.+...   .....+.+..|+...+.+++.+.+  .....++.+-
T Consensus        79 i~ag~p~kp---G~~R~dL~~~N~~Iv~~i~~~I~~--~~p~a~vlvv  121 (326)
T 3pqe_A           79 ICAGANQKP---GETRLELVEKNLKIFKGIVSEVMA--SGFDGIFLVA  121 (326)
T ss_dssp             ECCSCCCCT---TCCHHHHHHHHHHHHHHHHHHHHH--TTCCSEEEEC
T ss_pred             EecccCCCC---CccHHHHHHHHHHHHHHHHHHHHH--hcCCeEEEEc
Confidence            999975322   233567889999999999999998  4444444433

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.09  E-value=4.3e-06  Score=65.53  Aligned_cols=73  Identities=11%  Similarity=0.139  Sum_probs=54.5

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCC-ccccc---CCCCCccccCcccccCcchHHhh-ccCCCEEEEccC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS-KAELI---FPGKKTRFFPGVMIAEEPQWRDC-IQGSTAVVNLAG  125 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~~---~~~~~~~~~~~~d~~~~~~~~~~-~~~~d~Vi~~a~  125 (363)
                      ++|+|+|+ |.+|+.+++.|.+.|++|+++++++. ..+.+   ....  .....+|..+.+.+.++ ++++|+||.+.+
T Consensus         4 ~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~--~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~   80 (153)
T 1id1_A            4 DHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDN--ADVIPGDSNDSSVLKKAGIDRCRAILALSD   80 (153)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTT--CEEEESCTTSHHHHHHHTTTTCSEEEECSS
T ss_pred             CcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCC--CeEEEcCCCCHHHHHHcChhhCCEEEEecC
Confidence            58999995 99999999999999999999999752 21111   1111  11345688888888876 889999998775


Q ss_pred             C
Q 017977          126 T  126 (363)
Q Consensus       126 ~  126 (363)
                      .
T Consensus        81 ~   81 (153)
T 1id1_A           81 N   81 (153)
T ss_dssp             C
T ss_pred             C
Confidence            3

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=98.09  E-value=1.1e-06  Score=73.01  Aligned_cols=73  Identities=25%  Similarity=0.264  Sum_probs=52.2

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      |+|+|+||+|++|+.+++.|++.|++|++++|+++..+.+...... .....++. .+++.++++++|+||++..
T Consensus         1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~D~Vi~~~~   73 (212)
T 1jay_A            1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRR-IAGDASIT-GMKNEDAAEACDIAVLTIP   73 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHH-HHSSCCEE-EEEHHHHHHHCSEEEECSC
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc-ccccCCCC-hhhHHHHHhcCCEEEEeCC
Confidence            5899999999999999999999999999999987654432211000 00002232 3567777889999999875

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.08  E-value=2.2e-06  Score=70.39  Aligned_cols=74  Identities=16%  Similarity=-0.003  Sum_probs=51.9

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHH---hhc--cCCCEEEEc
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWR---DCI--QGSTAVVNL  123 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~---~~~--~~~d~Vi~~  123 (363)
                      .+++|+|+||+|.+|+.+++.+...|++|++++|++...+.......   ...+|..+.+..+   +..  .++|+||++
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~---~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~  114 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGV---EYVGDSRSVDFADEILELTDGYGVDVVLNS  114 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCC---SEEEETTCSTHHHHHHHHTTTCCEEEEEEC
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCC---CEEeeCCcHHHHHHHHHHhCCCCCeEEEEC
Confidence            44689999999999999999999999999999998765443322211   1124554443332   222  258999999


Q ss_pred             cC
Q 017977          124 AG  125 (363)
Q Consensus       124 a~  125 (363)
                      ++
T Consensus       115 ~g  116 (198)
T 1pqw_A          115 LA  116 (198)
T ss_dssp             CC
T ss_pred             Cc
Confidence            87

>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A

Probab=98.08  E-value=8.6e-06  Score=72.58  Aligned_cols=97  Identities=14%  Similarity=0.154  Sum_probs=60.3

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCC-----C-EEEEEeCCCCccc---ccCCCCCccccCcccccCcchHHhhccCCCE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADN-----H-QVRVLTRSRSKAE---LIFPGKKTRFFPGVMIAEEPQWRDCIQGSTA  119 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g-----~-~V~~~~r~~~~~~---~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~  119 (363)
                      .||||+|.||||++|+.|++.|++++     + +|+.+.+..+...   .......  ....+++.+.+  .+.+.++|+
T Consensus         8 ~m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~--~~~~~~~~~~~--~~~~~~~Dv   83 (352)
T 2nqt_A            8 NATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLT--PLAHRVVEPTE--AAVLGGHDA   83 (352)
T ss_dssp             SCEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCG--GGTTCBCEECC--HHHHTTCSE
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhccccc--ccceeeeccCC--HHHhcCCCE
Confidence            45799999999999999999999987     4 7788764332211   1111110  00112222222  233568999


Q ss_pred             EEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccc
Q 017977          120 VVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKP  172 (363)
Q Consensus       120 Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~  172 (363)
                      ||.+++...                   ...++..+ +  .++ ++|-+|+..
T Consensus        84 Vf~alg~~~-------------------s~~~~~~~-~--~G~-~vIDlSa~~  113 (352)
T 2nqt_A           84 VFLALPHGH-------------------SAVLAQQL-S--PET-LIIDCGADF  113 (352)
T ss_dssp             EEECCTTSC-------------------CHHHHHHS-C--TTS-EEEECSSTT
T ss_pred             EEECCCCcc-------------------hHHHHHHH-h--CCC-EEEEECCCc
Confidence            999987521                   13566777 6  565 478888774

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=98.06  E-value=8.3e-06  Score=71.83  Aligned_cols=111  Identities=16%  Similarity=0.215  Sum_probs=64.7

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCC--EEEEEeCCCCccc----ccCCCCCccccCcccccCcchHHhhccCCCEEEE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAE----LIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVN  122 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~----~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~  122 (363)
                      .+|||.|+|+ |.+|..++..|+..|.  ++.+++++..+.+    .+.....  ....+.+..  .-.+.++++|+||.
T Consensus         8 ~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~--~~~~~~i~~--~~~~a~~~aDiVvi   82 (326)
T 3vku_A            8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALP--FTSPKKIYS--AEYSDAKDADLVVI   82 (326)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGG--GSCCCEEEE--CCGGGGTTCSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhh--hcCCcEEEE--CcHHHhcCCCEEEE
Confidence            3479999996 9999999999998886  8999999765432    1111100  001122221  12356889999999


Q ss_pred             ccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEe
Q 017977          123 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLEL  169 (363)
Q Consensus       123 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~S  169 (363)
                      +||.+..   ......+.++.|+.-.+.+.+.+.+  .....++.+-
T Consensus        83 ~ag~~~k---pG~tR~dL~~~N~~I~~~i~~~i~~--~~p~a~ilvv  124 (326)
T 3vku_A           83 TAGAPQK---PGETRLDLVNKNLKILKSIVDPIVD--SGFNGIFLVA  124 (326)
T ss_dssp             CCCCC-------------------CHHHHHHHHHT--TTCCSEEEEC
T ss_pred             CCCCCCC---CCchHHHHHHHHHHHHHHHHHHHHh--cCCceEEEEc
Confidence            9997422   2233567888999999999999998  4444444433

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=98.06  E-value=7e-06  Score=72.36  Aligned_cols=105  Identities=14%  Similarity=0.167  Sum_probs=70.1

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCC-EEEEEeCCCCcccccCCCCCcc---ccCcccccCcchHHhhccCCCEEEEcc
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTR---FFPGVMIAEEPQWRDCIQGSTAVVNLA  124 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~~d~Vi~~a  124 (363)
                      ++|||.|+|+ |.+|..++..|+..|+ +|.++++++.+.+.........   ......+.-..++ ++++++|+||.++
T Consensus         6 ~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d~-~a~~~aDiVIiaa   83 (324)
T 3gvi_A            6 ARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGANDY-AAIEGADVVIVTA   83 (324)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESSG-GGGTTCSEEEECC
T ss_pred             cCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCCH-HHHCCCCEEEEcc
Confidence            4579999998 9999999999999998 9999999886542110000000   0001122211223 6789999999999


Q ss_pred             CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhC
Q 017977          125 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES  158 (363)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  158 (363)
                      |.+...   .....+.+..|....+.+++.+.+.
T Consensus        84 g~p~k~---G~~R~dl~~~N~~i~~~i~~~i~~~  114 (324)
T 3gvi_A           84 GVPRKP---GMSRDDLLGINLKVMEQVGAGIKKY  114 (324)
T ss_dssp             SCCCC--------CHHHHHHHHHHHHHHHHHHHH
T ss_pred             CcCCCC---CCCHHHHHHhhHHHHHHHHHHHHHH
Confidence            875332   2234567888999999999999983

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=98.02  E-value=2.2e-05  Score=69.24  Aligned_cols=111  Identities=16%  Similarity=0.224  Sum_probs=71.9

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCC--EEEEEeCCCCcccc----cCCCCCccccCcccccCcchHHhhccCCCEEEEc
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAEL----IFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNL  123 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~----~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~  123 (363)
                      +|||.|+|+ |++|..++-.|+..|.  +|.+++++..+.+.    +.....  ......+.. +. .+.++++|+||.+
T Consensus         7 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~--~~~~~~i~~-~~-~~a~~~aDvVii~   81 (318)
T 1y6j_A            7 RSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLP--FMGQMSLYA-GD-YSDVKDCDVIVVT   81 (318)
T ss_dssp             CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCC--CTTCEEEC---C-GGGGTTCSEEEEC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHH--hcCCeEEEE-CC-HHHhCCCCEEEEc
Confidence            479999998 9999999999999887  99999998754331    111110  011223332 22 4568999999999


Q ss_pred             cCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEec
Q 017977          124 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELV  170 (363)
Q Consensus       124 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS  170 (363)
                      ++.+...   .....+....|+...+.+++.+.+  .....+|.+.|
T Consensus        82 ~g~p~k~---g~~r~dl~~~n~~i~~~i~~~i~~--~~p~a~viv~t  123 (318)
T 1y6j_A           82 AGANRKP---GETRLDLAKKNVMIAKEVTQNIMK--YYNHGVILVVS  123 (318)
T ss_dssp             CCC---------CHHHHHHHHHHHHHHHHHHHHH--HCCSCEEEECS
T ss_pred             CCCCCCC---CcCHHHHHHhhHHHHHHHHHHHHH--hCCCcEEEEec
Confidence            9875321   123456788999999999999998  34444555543

>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}

Probab=98.02  E-value=2.7e-05  Score=69.35  Aligned_cols=97  Identities=14%  Similarity=0.101  Sum_probs=58.9

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCC-EEEEEeCCCCcccccCCCCCcccc-CcccccCcchHHhhccCCCEEEEccCC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFF-PGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      +|+||.|.||+|++|+.+++.|.+++. +++++.+..+.............. ....+.+.+   + +.++|+||.+++.
T Consensus         3 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~~~~~~~g~~~~~~~~~~---~-~~~vDvV~~a~g~   78 (345)
T 2ozp_A            3 GKKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHFVHPNLRGRTNLKFVPPE---K-LEPADILVLALPH   78 (345)
T ss_dssp             -CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGGTCGGGTTTCCCBCBCGG---G-CCCCSEEEECCCT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhHHhCchhcCcccccccchh---H-hcCCCEEEEcCCc
Confidence            357999999999999999999998764 888887654332222111000000 111222222   3 5789999999875


Q ss_pred             CCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEecc
Q 017977          127 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVK  171 (363)
Q Consensus       127 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~  171 (363)
                      .                   ....++..+.+  .|++ +|-+|+.
T Consensus        79 ~-------------------~s~~~a~~~~~--aG~~-VId~Sa~  101 (345)
T 2ozp_A           79 G-------------------VFAREFDRYSA--LAPV-LVDLSAD  101 (345)
T ss_dssp             T-------------------HHHHTHHHHHT--TCSE-EEECSST
T ss_pred             H-------------------HHHHHHHHHHH--CCCE-EEEcCcc
Confidence            2                   12345566666  5664 7777764

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=98.00  E-value=1.2e-05  Score=71.56  Aligned_cols=79  Identities=10%  Similarity=-0.032  Sum_probs=59.5

Q ss_pred             CccEEEEecCcchHHHHHHHHHH-hCCCEEEEEeCCCCcccccC----------------CCCCccccCcccccCcchHH
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQ-ADNHQVRVLTRSRSKAELIF----------------PGKKTRFFPGVMIAEEPQWR  111 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~-~~g~~V~~~~r~~~~~~~~~----------------~~~~~~~~~~~d~~~~~~~~  111 (363)
                      .+|++|||||++.+|.+.+..|+ ..|..|+++.+.....+...                ..+.......+|+.+.++++
T Consensus        49 ~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i~  128 (401)
T 4ggo_A           49 APKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIKA  128 (401)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHHH
Confidence            45799999999999999999998 67999999998765543211                11222234568999988777


Q ss_pred             hhcc-------CCCEEEEccCCC
Q 017977          112 DCIQ-------GSTAVVNLAGTP  127 (363)
Q Consensus       112 ~~~~-------~~d~Vi~~a~~~  127 (363)
                      ++++       ++|++||+++.+
T Consensus       129 ~vi~~i~~~~G~IDiLVhS~A~~  151 (401)
T 4ggo_A          129 QVIEEAKKKGIKFDLIVYSLASP  151 (401)
T ss_dssp             HHHHHHHHTTCCEEEEEECCCCS
T ss_pred             HHHHHHHHhcCCCCEEEEecccc
Confidence            6664       689999999975

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=98.00  E-value=7.7e-06  Score=71.08  Aligned_cols=109  Identities=14%  Similarity=0.149  Sum_probs=74.2

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCC--EEEEEeCCCCcccc----cCCCCCccccCcccccCcchHHhhccCCCEEEEcc
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAEL----IFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA  124 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~----~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a  124 (363)
                      |||.|+|+ |.+|..++..|+..|+  +|..+++++...+.    +..... .......+.-..+ .++++++|+||.++
T Consensus         1 MkI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~-~~~~~~~i~~t~d-~~a~~~aDiVViaa   77 (294)
T 1oju_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAA-GIDKYPKIVGGAD-YSLLKGSEIIVVTA   77 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHH-TTTCCCEEEEESC-GGGGTTCSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhh-hcCCCCEEEEeCC-HHHhCCCCEEEECC
Confidence            69999998 9999999999999887  99999998765321    100000 0001122221222 56789999999999


Q ss_pred             CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEE
Q 017977          125 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVL  167 (363)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~  167 (363)
                      +.+...   .....+.+..|....+.+.+.+.+  .....++.
T Consensus        78 g~~~kp---G~~R~dl~~~N~~i~~~i~~~i~~--~~p~a~ii  115 (294)
T 1oju_A           78 GLARKP---GMTRLDLAHKNAGIIKDIAKKIVE--NAPESKIL  115 (294)
T ss_dssp             CCCCCS---SCCHHHHHHHHHHHHHHHHHHHHT--TSTTCEEE
T ss_pred             CCCCCC---CCcHHHHHHHHHHHHHHHHHHHHh--hCCCeEEE
Confidence            875332   223567889999999999999999  44333333

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=97.99  E-value=1.3e-05  Score=68.98  Aligned_cols=73  Identities=16%  Similarity=0.162  Sum_probs=45.8

Q ss_pred             ccEEEEecCcchHHHHHHHHHHh-CCCEEEEEe-CCCCcc--cccCCCCCccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQA-DNHQVRVLT-RSRSKA--ELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~-~g~~V~~~~-r~~~~~--~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      +|||+|+|++|++|+.+++.+.+ .|+++.++. ++++..  ........   ....++...+++.++++++|+||+++.
T Consensus         5 ~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g---~~~~~v~~~~dl~~~l~~~DvVIDft~   81 (273)
T 1dih_A            5 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAG---AGKTGVTVQSSLDAVKDDFDVFIDFTR   81 (273)
T ss_dssp             BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSS---SSCCSCCEESCSTTTTTSCSEEEECSC
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcC---CCcCCceecCCHHHHhcCCCEEEEcCC
Confidence            47999999999999999999875 578888554 443221  11111000   111122223445666778999998874

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=97.97  E-value=2.9e-05  Score=68.06  Aligned_cols=100  Identities=18%  Similarity=0.204  Sum_probs=69.9

Q ss_pred             cEEEEecCcchHHHHHHHHHHhC-C--CEEEEEeCCCCc---ccccCCCCCccccCcccccC--cchHHhhccCCCEEEE
Q 017977           51 MTVSVTGATGFIGRRLVQRLQAD-N--HQVRVLTRSRSK---AELIFPGKKTRFFPGVMIAE--EPQWRDCIQGSTAVVN  122 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~-g--~~V~~~~r~~~~---~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~d~Vi~  122 (363)
                      |||.|+||+|.+|..++..|... +  .++..+++++..   ..++...     .....+..  .+...+.++++|+||.
T Consensus         1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~~~~G~a~Dl~~~-----~~~~~v~~~~~~~~~~~~~~aDivii   75 (312)
T 3hhp_A            1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHI-----PTAVKIKGFSGEDATPALEGADVVLI   75 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSSTTHHHHHHHHHTS-----CSSEEEEEECSSCCHHHHTTCSEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCCCchhHHHHhhCC-----CCCceEEEecCCCcHHHhCCCCEEEE
Confidence            69999999999999999999875 5  589999987611   1111111     00112211  1234567899999999


Q ss_pred             ccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhC
Q 017977          123 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES  158 (363)
Q Consensus       123 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  158 (363)
                      +||.+..   ......+.++.|....+.+.+++.+.
T Consensus        76 ~ag~~rk---pG~~R~dll~~N~~I~~~i~~~i~~~  108 (312)
T 3hhp_A           76 SAGVARK---PGMDRSDLFNVNAGIVKNLVQQVAKT  108 (312)
T ss_dssp             CCSCSCC---TTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             eCCCCCC---CCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            9997532   22346789999999999999999983

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.96  E-value=1.7e-05  Score=64.04  Aligned_cols=74  Identities=14%  Similarity=0.068  Sum_probs=55.7

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhC-CCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhh--ccCCCEEEEccC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC--IQGSTAVVNLAG  125 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~--~~~~d~Vi~~a~  125 (363)
                      ..++|+|+| .|.+|+.+++.|.+. |++|+++++++.....+.....  ....+|..+.+.+.++  ++++|+||.+.+
T Consensus        38 ~~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~--~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~  114 (183)
T 3c85_A           38 GHAQVLILG-MGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSEGR--NVISGDATDPDFWERILDTGHVKLVLLAMP  114 (183)
T ss_dssp             TTCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTC--CEEECCTTCHHHHHTBCSCCCCCEEEECCS
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHCCC--CEEEcCCCCHHHHHhccCCCCCCEEEEeCC
Confidence            346899999 599999999999999 9999999999876554432211  1223466677777776  788999998765

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=97.96  E-value=2.5e-05  Score=68.83  Aligned_cols=103  Identities=16%  Similarity=0.162  Sum_probs=71.5

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCC-EEEEEeCCCCcccc----cCCCCCccccCcccccCcchHHhhccCCCEEEEcc
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAEL----IFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA  124 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~----~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a  124 (363)
                      +|||.|+|+ |.+|..++..|+..|. +|.++++++.+.+.    +..... .......+.-.++ .++++++|+||.++
T Consensus         5 ~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~-~~~~~~~v~~t~d-~~a~~~aDvVIi~a   81 (321)
T 3p7m_A            5 RKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCP-IEGVDFKVRGTND-YKDLENSDVVIVTA   81 (321)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHH-HHTCCCCEEEESC-GGGGTTCSEEEECC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhh-hcCCCcEEEEcCC-HHHHCCCCEEEEcC
Confidence            479999995 9999999999999887 99999998865431    111000 0001122221122 35789999999999


Q ss_pred             CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhC
Q 017977          125 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES  158 (363)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  158 (363)
                      +.+....   ....+.+..|....+.+++.+.+.
T Consensus        82 g~p~k~G---~~R~dl~~~N~~i~~~i~~~i~~~  112 (321)
T 3p7m_A           82 GVPRKPG---MSRDDLLGINIKVMQTVGEGIKHN  112 (321)
T ss_dssp             SCCCCTT---CCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CcCCCCC---CCHHHHHHHhHHHHHHHHHHHHHH
Confidence            8753322   235678889999999999999983

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.93  E-value=4e-06  Score=69.92  Aligned_cols=73  Identities=18%  Similarity=0.140  Sum_probs=56.5

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhh-ccCCCEEEEccC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC-IQGSTAVVNLAG  125 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~d~Vi~~a~  125 (363)
                      |+|+|+|+ |.+|+++++.|.+.|++|+++++++.....+..... .....+|..+.+.+.++ ++++|+||-+.+
T Consensus         1 M~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~-~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~   74 (218)
T 3l4b_C            1 MKVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLK-ATIIHGDGSHKEILRDAEVSKNDVVVILTP   74 (218)
T ss_dssp             CCEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSS-SEEEESCTTSHHHHHHHTCCTTCEEEECCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcC-CeEEEcCCCCHHHHHhcCcccCCEEEEecC
Confidence            68999996 999999999999999999999999876554322111 11344688888888775 789999997665

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=97.92  E-value=3.2e-05  Score=67.90  Aligned_cols=113  Identities=15%  Similarity=0.117  Sum_probs=73.1

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCC-EEEEEeCCC--CcccccCCCCC-cccc--CcccccCcchHHhhccCCCEEEE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSR--SKAELIFPGKK-TRFF--PGVMIAEEPQWRDCIQGSTAVVN  122 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~--~~~~~~~~~~~-~~~~--~~~d~~~~~~~~~~~~~~d~Vi~  122 (363)
                      .++||.|+|+ |.+|..++..|+..|+ +|.++++++  ........... ...+  ....+.-..+ .+.++++|+||-
T Consensus         7 ~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~d-~~a~~~aDvVIi   84 (315)
T 3tl2_A            7 KRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTSD-YADTADSDVVVI   84 (315)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEESC-GGGGTTCSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcCC-HHHhCCCCEEEE
Confidence            4569999996 9999999999999999 999999984  22111100000 0000  0011111112 256889999999


Q ss_pred             ccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEE
Q 017977          123 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLE  168 (363)
Q Consensus       123 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~  168 (363)
                      ++|.+...   .....+.+..|....+.+.+.+.+  .....++.+
T Consensus        85 aag~p~kp---g~~R~dl~~~N~~i~~~i~~~i~~--~~p~a~vlv  125 (315)
T 3tl2_A           85 TAGIARKP---GMSRDDLVATNSKIMKSITRDIAK--HSPNAIIVV  125 (315)
T ss_dssp             CCSCCCCT---TCCHHHHHHHHHHHHHHHHHHHHH--HCTTCEEEE
T ss_pred             eCCCCCCC---CCCHHHHHHHHHHHHHHHHHHHHH--hCCCeEEEE
Confidence            99975332   233568889999999999999998  443334433

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=97.90  E-value=1.8e-05  Score=70.30  Aligned_cols=117  Identities=13%  Similarity=0.113  Sum_probs=74.8

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCC-EEEEEeCCCCcccccCCCC--Cc-cccCcccccCcchHHhhccCCCEEEEccC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGK--KT-RFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~--~~-~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      +|||.|+|| |.+|..++..|+..|+ +|.++++++...+......  .. .......+.-..++.+.++++|+||-+++
T Consensus         9 ~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~ea~~~aDiVi~a~g   87 (331)
T 1pzg_A            9 RKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADCVIVTAG   87 (331)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSEEEECCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEeCCHHHHhCCCCEEEEccC
Confidence            479999998 9999999999999998 9999999876543310000  00 00001122222456668899999999998


Q ss_pred             CCCCCCCCh--hhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEe
Q 017977          126 TPIGTRWSS--EIKKEIKESRIRVTSKVVDLINESPEGVRPSVLEL  169 (363)
Q Consensus       126 ~~~~~~~~~--~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~S  169 (363)
                      .+.......  ....+....|....+.+++.+.+  .....+++..
T Consensus        88 ~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~--~~p~a~vi~~  131 (331)
T 1pzg_A           88 LTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKK--YCPKTFIIVV  131 (331)
T ss_dssp             CSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHH--HCTTCEEEEC
T ss_pred             CCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHH--HCCCcEEEEE
Confidence            653321100  01245567788888899999988  3334344444

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.90  E-value=8.9e-06  Score=62.65  Aligned_cols=74  Identities=15%  Similarity=0.068  Sum_probs=56.2

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhh-ccCCCEEEEccCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC-IQGSTAVVNLAGT  126 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~d~Vi~~a~~  126 (363)
                      .++|+|+|+ |.+|+.+++.|.+.|++|+++++++...+.+.....  ....+|..+.+.+.++ ++++|+||-+.+.
T Consensus         7 ~~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~--~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~   81 (140)
T 3fwz_A            7 CNHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGV--RAVLGNAANEEIMQLAHLECAKWLILTIPN   81 (140)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTC--EEEESCTTSHHHHHHTTGGGCSEEEECCSC
T ss_pred             CCCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCC--CEEECCCCCHHHHHhcCcccCCEEEEECCC
Confidence            358999995 999999999999999999999999877654432211  1234577777777654 6789999977653

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=97.88  E-value=5.3e-05  Score=64.87  Aligned_cols=73  Identities=16%  Similarity=0.133  Sum_probs=47.9

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhC-CCEEEEE-eCCCCccc--ccCCCCCccccCcccccCcchHHhhccCCCEEEEcc
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQAD-NHQVRVL-TRSRSKAE--LIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA  124 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~~--~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a  124 (363)
                      +||||.|+|++|.+|+.+++.+.+. ++++.++ +|+.++..  ...+...   ... ++.-.+++++++.++|+||.+.
T Consensus         6 ~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~g---~~~-gv~v~~dl~~ll~~~DVVIDfT   81 (272)
T 4f3y_A            6 SSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLG---KQT-GVALTDDIERVCAEADYLIDFT   81 (272)
T ss_dssp             CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTTT---CCC-SCBCBCCHHHHHHHCSEEEECS
T ss_pred             cccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHhC---CCC-CceecCCHHHHhcCCCEEEEcC
Confidence            4689999999999999999999875 6777774 66543211  1111000   011 2333456777777899999986


Q ss_pred             C
Q 017977          125 G  125 (363)
Q Consensus       125 ~  125 (363)
                      .
T Consensus        82 ~   82 (272)
T 4f3y_A           82 L   82 (272)
T ss_dssp             C
T ss_pred             C
Confidence            3

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=97.88  E-value=4.7e-05  Score=67.51  Aligned_cols=102  Identities=19%  Similarity=0.161  Sum_probs=70.2

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCC-------EEEEEeCCCCcc--c----ccCCCCCccccCcccccCcchHHhhccC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNH-------QVRVLTRSRSKA--E----LIFPGKKTRFFPGVMIAEEPQWRDCIQG  116 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~--~----~~~~~~~~~~~~~~d~~~~~~~~~~~~~  116 (363)
                      ..||.|+||+|.||+.|+-.|.....       ++..++..+...  +    ++... ..  .....+.-.+...+++++
T Consensus        24 ~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~-~~--~~~~~~~~~~~~~~a~~~  100 (345)
T 4h7p_A           24 AVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDC-AF--PLLDKVVVTADPRVAFDG  100 (345)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHT-TC--TTEEEEEEESCHHHHTTT
T ss_pred             CCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhc-Cc--cCCCcEEEcCChHHHhCC
Confidence            35999999999999999998887532       788888765321  1    11100 00  000112223345678999


Q ss_pred             CCEEEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHh
Q 017977          117 STAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINE  157 (363)
Q Consensus       117 ~d~Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  157 (363)
                      +|+||-+||.+-.   ......+.++.|..-.+.+.+++.+
T Consensus       101 advVvi~aG~prk---pGmtR~DLl~~Na~I~~~~~~~i~~  138 (345)
T 4h7p_A          101 VAIAIMCGAFPRK---AGMERKDLLEMNARIFKEQGEAIAA  138 (345)
T ss_dssp             CSEEEECCCCCCC---TTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCEEEECCCCCCC---CCCCHHHHHHHhHHHHHHHHHHHHh
Confidence            9999999998633   2334678999999999999999987

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=97.85  E-value=3.9e-05  Score=67.23  Aligned_cols=110  Identities=13%  Similarity=0.150  Sum_probs=70.7

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCC--EEEEEeCCCCcccccCCCCCcc---ccCcccccCcchHHhhccCCCEEEEccC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGKKTR---FFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      |||.|+|+ |.+|..++..|+..|.  +|.++++++.+.+.........   ......+.-. ...+.++++|+||.++|
T Consensus         1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~-~~~~a~~~aDvVii~ag   78 (314)
T 3nep_X            1 MKVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGT-NDYGPTEDSDVCIITAG   78 (314)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEE-SSSGGGTTCSEEEECCC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEEC-CCHHHhCCCCEEEECCC
Confidence            69999996 9999999999998886  9999999886533110000000   0001122111 12457889999999998


Q ss_pred             CCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEE
Q 017977          126 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVL  167 (363)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~  167 (363)
                      .+..   ......+.+..|....+.+.+.+.+  .....++.
T Consensus        79 ~~~k---pG~~R~dl~~~N~~i~~~i~~~i~~--~~p~a~vi  115 (314)
T 3nep_X           79 LPRS---PGMSRDDLLAKNTEIVGGVTEQFVE--GSPDSTII  115 (314)
T ss_dssp             C----------CHHHHHHHHHHHHHHHHHHHT--TCTTCEEE
T ss_pred             CCCC---CCCCHHHHHHhhHHHHHHHHHHHHH--hCCCcEEE
Confidence            7522   2223567889999999999999998  44343443

>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1

Probab=97.85  E-value=3.7e-05  Score=68.34  Aligned_cols=93  Identities=16%  Similarity=0.143  Sum_probs=55.2

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCC---EEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNH---QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      +|+|+|.||+|++|+.+++.|.+++|   +++++.............     ...+++.+.+ . +.+.++|+||.+.+.
T Consensus         6 ~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~~~~~~-----g~~i~~~~~~-~-~~~~~~DvV~~a~g~   78 (340)
T 2hjs_A            6 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGFA-----ESSLRVGDVD-S-FDFSSVGLAFFAAAA   78 (340)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEEET-----TEEEECEEGG-G-CCGGGCSEEEECSCH
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCccccC-----CcceEEecCC-H-HHhcCCCEEEEcCCc
Confidence            46899999999999999999997654   556554221111111000     0011222211 1 225689999988863


Q ss_pred             CCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEecc
Q 017977          127 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVK  171 (363)
Q Consensus       127 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~  171 (363)
                      .                   ....++..+.+  .+++ +|.+|+.
T Consensus        79 ~-------------------~s~~~a~~~~~--aG~k-vId~Sa~  101 (340)
T 2hjs_A           79 E-------------------VSRAHAERARA--AGCS-VIDLSGA  101 (340)
T ss_dssp             H-------------------HHHHHHHHHHH--TTCE-EEETTCT
T ss_pred             H-------------------HHHHHHHHHHH--CCCE-EEEeCCC
Confidence            1                   12356667777  6765 6777765

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=97.83  E-value=4.9e-05  Score=65.82  Aligned_cols=110  Identities=14%  Similarity=0.160  Sum_probs=72.7

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCC--CEEEEEeCCCCcccc----cCCCCCccccCcccccCcchHHhhccCCCEEEEcc
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAEL----IFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA  124 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~----~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a  124 (363)
                      |||.|+|| |.||+.++-.|+.++  .++..++.++.....    +..... .......+.-..++ +.++++|+||-.|
T Consensus         1 MKV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~-~~~~~~~i~~~~d~-~~~~~aDvVvitA   77 (294)
T 2x0j_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAA-GIDKYPKIVGGADY-SLLKGSEIIVVTA   77 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHG-GGTCCCEEEEESCG-GGGTTCSEEEECC
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccc-cCCCCCeEecCCCH-HHhCCCCEEEEec
Confidence            79999995 999999999998876  489999987643211    110000 00000111111222 4588999999999


Q ss_pred             CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEE
Q 017977          125 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLE  168 (363)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~  168 (363)
                      |.+..+   .....+.++.|..-.+.+.+.+.+  ...+.++.+
T Consensus        78 G~prkp---GmtR~dLl~~Na~I~~~i~~~i~~--~~p~aivlv  116 (294)
T 2x0j_A           78 GLARKP---GMTRLDLAHKNAGIIKDIAKKIVE--NAPESKILV  116 (294)
T ss_dssp             CCCCCS---SSCHHHHHHHHHHHHHHHHHHHHT--TSTTCEEEE
T ss_pred             CCCCCC---CCchHHHHHHHHHHHHHHHHHHHh--cCCceEEEE
Confidence            986332   334678999999999999999999  444444443

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=97.81  E-value=2.1e-05  Score=70.55  Aligned_cols=75  Identities=21%  Similarity=0.187  Sum_probs=54.3

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc-----CCCEEEEc
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-----GSTAVVNL  123 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-----~~d~Vi~~  123 (363)
                      ..++|||+||+|.+|..+++.+...|.+|++++|++.+.+.......   ...+|+.+.+++.+.+.     ++|+||++
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~---~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~  245 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGG---EVFIDFTKEKDIVGAVLKATDGGAHGVINV  245 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTTC---CEEEETTTCSCHHHHHHHHHTSCEEEEEEC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCC---ceEEecCccHhHHHHHHHHhCCCCCEEEEC
Confidence            45689999999999999999999999999999998876543322211   11245554444444332     68999999


Q ss_pred             cCC
Q 017977          124 AGT  126 (363)
Q Consensus       124 a~~  126 (363)
                      ++.
T Consensus       246 ~g~  248 (347)
T 2hcy_A          246 SVS  248 (347)
T ss_dssp             SSC
T ss_pred             CCc
Confidence            984

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=97.80  E-value=1.4e-05  Score=71.15  Aligned_cols=75  Identities=16%  Similarity=0.081  Sum_probs=53.1

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhc-----cCCCEEEEc
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI-----QGSTAVVNL  123 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-----~~~d~Vi~~  123 (363)
                      .+++|+|+||+|.+|..+++.+...|++|++++|++.+.+.......   ...+|..+.+++.+.+     .++|+||++
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~---~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~  221 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGF---DAAFNYKTVNSLEEALKKASPDGYDCYFDN  221 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTC---SEEEETTSCSCHHHHHHHHCTTCEEEEEES
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCC---cEEEecCCHHHHHHHHHHHhCCCCeEEEEC
Confidence            45689999999999999999999999999999998765443322111   1224555533343333     258999999


Q ss_pred             cCC
Q 017977          124 AGT  126 (363)
Q Consensus       124 a~~  126 (363)
                      +|.
T Consensus       222 ~g~  224 (333)
T 1v3u_A          222 VGG  224 (333)
T ss_dssp             SCH
T ss_pred             CCh
Confidence            983

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=97.77  E-value=3e-05  Score=68.47  Aligned_cols=103  Identities=14%  Similarity=0.206  Sum_probs=70.9

Q ss_pred             CCCccEEEEecCcchHHHHHHHHHHhCCC--EEEEEeCCCCcccc----cCCCCCccccC-cccccCcchHHhhccCCCE
Q 017977           47 KASQMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAEL----IFPGKKTRFFP-GVMIAEEPQWRDCIQGSTA  119 (363)
Q Consensus        47 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~----~~~~~~~~~~~-~~d~~~~~~~~~~~~~~d~  119 (363)
                      ...++||.|+|+ |.+|..++..|+..|.  +|..++++..+.+.    +.....   +. ...+....+++ .++++|+
T Consensus        16 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~---~~~~~~i~~~~d~~-~~~~aDi   90 (331)
T 4aj2_A           16 QVPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSL---FLKTPKIVSSKDYS-VTANSKL   90 (331)
T ss_dssp             -CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGG---GCSCCEEEECSSGG-GGTTEEE
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhh---ccCCCeEEEcCCHH-HhCCCCE
Confidence            344579999997 9999999999999886  89999997643321    111000   10 11122122343 5899999


Q ss_pred             EEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHh
Q 017977          120 VVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINE  157 (363)
Q Consensus       120 Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  157 (363)
                      ||.+||.+...   .....+.++.|..-.+.+.+.+.+
T Consensus        91 Vvi~aG~~~kp---G~tR~dL~~~N~~I~~~i~~~i~~  125 (331)
T 4aj2_A           91 VIITAGARQQE---GESRLNLVQRNVNIFKFIIPNVVK  125 (331)
T ss_dssp             EEECCSCCCCT---TCCGGGGHHHHHHHHHHHHHHHHH
T ss_pred             EEEccCCCCCC---CccHHHHHHHHHHHHHHHHHHHHH
Confidence            99999975332   223457889999999999999998

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=97.77  E-value=1.5e-05  Score=72.09  Aligned_cols=76  Identities=14%  Similarity=0.164  Sum_probs=56.7

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCCC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  127 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~~  127 (363)
                      ..++|+|+|+ |.+|+.+++.|...|++|++++|++.+.+........  ...+|..+.+++.+.+.++|+||++++.+
T Consensus       165 ~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~--~~~~~~~~~~~l~~~~~~~DvVi~~~g~~  240 (369)
T 2eez_A          165 APASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGG--RVITLTATEANIKKSVQHADLLIGAVLVP  240 (369)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTT--SEEEEECCHHHHHHHHHHCSEEEECCC--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCc--eEEEecCCHHHHHHHHhCCCEEEECCCCC
Confidence            4479999998 9999999999999999999999987654433211110  12245556677888888999999999863

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=97.76  E-value=4.6e-05  Score=67.27  Aligned_cols=108  Identities=12%  Similarity=0.177  Sum_probs=68.7

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCC-EEEEEeCCCCcccccCCCCCc---cccCcccccCcchHHhhccCCCEEEEcc
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKT---RFFPGVMIAEEPQWRDCIQGSTAVVNLA  124 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~~~~~~~d~Vi~~a  124 (363)
                      .+|||.|+|| |.+|..++..|+..|+ +|.++++++...+........   .......+....++ ++++++|+||.++
T Consensus         3 ~~~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~Vi~a~   80 (322)
T 1t2d_A            3 PKAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTY-DDLAGADVVIVTA   80 (322)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCG-GGGTTCSEEEECC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeC
Confidence            3479999998 9999999999999998 999999987654311000000   00001122222345 6789999999999


Q ss_pred             CCCCCCCCC--hhhHHHHHHHHHHHHHHHHHHHHhC
Q 017977          125 GTPIGTRWS--SEIKKEIKESRIRVTSKVVDLINES  158 (363)
Q Consensus       125 ~~~~~~~~~--~~~~~~~~~~n~~~~~~l~~~~~~~  158 (363)
                      +.+......  +....+....|+...+.+++.+.+.
T Consensus        81 g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~  116 (322)
T 1t2d_A           81 GFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKN  116 (322)
T ss_dssp             SCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHH
Confidence            865322111  0002345667777788888888873

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.76  E-value=6.2e-06  Score=63.87  Aligned_cols=71  Identities=8%  Similarity=0.101  Sum_probs=54.8

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  127 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~~  127 (363)
                      .++|+|+|+ |.+|+.+++.|.+.|++|++++|++.+.+.+...      .+.+....+++.+.+.++|+||.+.+..
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~------~~~~~~~~~~~~~~~~~~Divi~at~~~   91 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEK------YEYEYVLINDIDSLIKNNDVIITATSSK   91 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHH------HTCEEEECSCHHHHHHTCSEEEECSCCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHH------hCCceEeecCHHHHhcCCCEEEEeCCCC
Confidence            469999995 9999999999999999999999988765543221      1134445566777888999999988753

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=97.76  E-value=0.0001  Score=64.73  Aligned_cols=102  Identities=18%  Similarity=0.203  Sum_probs=68.5

Q ss_pred             cEEEEecCcchHHHHHHHHHHhC--CCEEEEEeCCCCcccccCC---CCCccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQAD--NHQVRVLTRSRSKAELIFP---GKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      |||.|+|+ |.+|..++..|.+.  |++|.++++++...+....   ...........+....++.+ ++++|+||-+++
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~~-l~~aDvViiav~   78 (310)
T 1guz_A            1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYAD-TANSDIVIITAG   78 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGG-GTTCSEEEECCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEECCCHHH-HCCCCEEEEeCC
Confidence            58999998 99999999999985  7999999998865443210   00000000112222233444 889999999998


Q ss_pred             CCCCCCCChhhHHHHHHHHHHHHHHHHHHHHh
Q 017977          126 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINE  157 (363)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  157 (363)
                      .+...   .....+.+..|+...+.+++.+.+
T Consensus        79 ~p~~~---g~~r~dl~~~n~~i~~~i~~~i~~  107 (310)
T 1guz_A           79 LPRKP---GMTREDLLMKNAGIVKEVTDNIMK  107 (310)
T ss_dssp             CCCCT---TCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCC---CCCHHHHHHHHHHHHHHHHHHHHH
Confidence            64221   122457778898888899999888

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=97.73  E-value=5.3e-05  Score=66.77  Aligned_cols=112  Identities=13%  Similarity=0.141  Sum_probs=74.6

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCC--CEEEEEeCCCCcccc----cCCCCCcccc-CcccccCcchHHhhccCCCEEE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAEL----IFPGKKTRFF-PGVMIAEEPQWRDCIQGSTAVV  121 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~----~~~~~~~~~~-~~~d~~~~~~~~~~~~~~d~Vi  121 (363)
                      ++|||.|+|| |.+|..++..|+..|  .+|..+++++.+.+.    +.....  .. ....+.. + -.++++++|+||
T Consensus         5 ~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~--~~~~~~~v~~-~-~~~a~~~aDvVv   79 (317)
T 3d0o_A            5 KGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATP--YSPTTVRVKA-G-EYSDCHDADLVV   79 (317)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGG--GSSSCCEEEE-C-CGGGGTTCSEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhh--hcCCCeEEEe-C-CHHHhCCCCEEE
Confidence            3469999998 999999999999887  489999987643221    100000  00 1122222 2 255689999999


Q ss_pred             EccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEec
Q 017977          122 NLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELV  170 (363)
Q Consensus       122 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS  170 (363)
                      .+++.+...   .....+.+..|....+.+.+.+.+  .....++.+.|
T Consensus        80 i~ag~~~~~---g~~r~dl~~~n~~i~~~i~~~i~~--~~p~a~viv~t  123 (317)
T 3d0o_A           80 ICAGAAQKP---GETRLDLVSKNLKIFKSIVGEVMA--SKFDGIFLVAT  123 (317)
T ss_dssp             ECCCCCCCT---TCCHHHHHHHHHHHHHHHHHHHHH--TTCCSEEEECS
T ss_pred             ECCCCCCCC---CCcHHHHHHHHHHHHHHHHHHHHH--hCCCcEEEEec
Confidence            999875332   223456788999999999999998  44444555543

>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}

Probab=97.73  E-value=0.00013  Score=62.69  Aligned_cols=77  Identities=16%  Similarity=0.178  Sum_probs=47.4

Q ss_pred             CCCCccEEEEecCcchHHHHHHHHHHhC-CCEEEEE-eCCCCcc--cccCCCCCccccCcccccCcchHHhhccCCCEEE
Q 017977           46 QKASQMTVSVTGATGFIGRRLVQRLQAD-NHQVRVL-TRSRSKA--ELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVV  121 (363)
Q Consensus        46 ~~~~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~--~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi  121 (363)
                      .+++++||.|.|++|.+|+.+++.+.+. +.++.++ +|+.+..  ....+...   ....++.-.+++++++.++|+||
T Consensus        17 ~m~~~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~d~gel~G---~~~~gv~v~~dl~~ll~~aDVvI   93 (288)
T 3ijp_A           17 QGPGSMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDKDASILIG---SDFLGVRITDDPESAFSNTEGIL   93 (288)
T ss_dssp             ----CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTTSBGGGGTT---CSCCSCBCBSCHHHHTTSCSEEE
T ss_pred             hccCCeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccchHHhhc---cCcCCceeeCCHHHHhcCCCEEE
Confidence            4455679999999999999999999864 6787766 5543321  11100000   11123333456777888999999


Q ss_pred             EccC
Q 017977          122 NLAG  125 (363)
Q Consensus       122 ~~a~  125 (363)
                      .+..
T Consensus        94 DFT~   97 (288)
T 3ijp_A           94 DFSQ   97 (288)
T ss_dssp             ECSC
T ss_pred             EcCC
Confidence            8864

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=97.72  E-value=2.7e-05  Score=67.10  Aligned_cols=74  Identities=15%  Similarity=0.139  Sum_probs=51.8

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCCC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  127 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~~  127 (363)
                      ..++|+|+|+ |.+|++++..|++.|++|++++|+.++.+.+......  ...++..+.+++.+  .++|+||++++..
T Consensus       118 ~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~--~~~~~~~~~~~~~~--~~~DivVn~t~~~  191 (271)
T 1nyt_A          118 PGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAH--TGSIQALSMDELEG--HEFDLIINATSSG  191 (271)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGG--GSSEEECCSGGGTT--CCCSEEEECCSCG
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhc--cCCeeEecHHHhcc--CCCCEEEECCCCC
Confidence            4579999998 8899999999999999999999987665443221110  00233334333332  5899999999863

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=97.72  E-value=4.9e-05  Score=70.33  Aligned_cols=76  Identities=20%  Similarity=0.371  Sum_probs=53.7

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcc-----------cccCcchHHhhccCCCE
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGV-----------MIAEEPQWRDCIQGSTA  119 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-----------d~~~~~~~~~~~~~~d~  119 (363)
                      |+|.|+| +|++|..++..|.+.|++|++++|++.+.+.+..........++           .+.-..++.++++++|+
T Consensus         3 mkI~VIG-~G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~aDv   81 (450)
T 3gg2_A            3 LDIAVVG-IGYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEADI   81 (450)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGCSE
T ss_pred             CEEEEEC-cCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhcCCE
Confidence            7999999 59999999999999999999999998765544321110001111           12223456677889999


Q ss_pred             EEEccCCC
Q 017977          120 VVNLAGTP  127 (363)
Q Consensus       120 Vi~~a~~~  127 (363)
                      ||-+.+.+
T Consensus        82 ViiaVptp   89 (450)
T 3gg2_A           82 IFIAVGTP   89 (450)
T ss_dssp             EEECCCCC
T ss_pred             EEEEcCCC
Confidence            99888654

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=97.70  E-value=4.8e-05  Score=66.99  Aligned_cols=109  Identities=15%  Similarity=0.203  Sum_probs=69.1

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCC--EEEEEeCCCCcccc----cCCCCCccccCcccccCcchHHhhccCCCEEEEc
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAEL----IFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNL  123 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~----~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~  123 (363)
                      .|||.|+|| |.+|..++-.|+..+.  +|..++++..+.+.    +.....  ....+.+.. + -.++++++|+||.+
T Consensus         5 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~--~~~~~~v~~-~-~~~a~~~aDvVii~   79 (318)
T 1ez4_A            5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQA--FTAPKKIYS-G-EYSDCKDADLVVIT   79 (318)
T ss_dssp             BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGG--GSCCCEEEE-C-CGGGGTTCSEEEEC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHH--hcCCeEEEE-C-CHHHhCCCCEEEEC
Confidence            379999998 9999999999998775  89999997644321    100000  011222222 2 24568999999999


Q ss_pred             cCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEE
Q 017977          124 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLE  168 (363)
Q Consensus       124 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~  168 (363)
                      ++.+...   .....+.+..|+...+.+.+.+.+  .....++.+
T Consensus        80 ag~~~~~---g~~R~dl~~~n~~i~~~i~~~i~~--~~p~a~iiv  119 (318)
T 1ez4_A           80 AGAPQKP---GESRLDLVNKNLNILSSIVKPVVD--SGFDGIFLV  119 (318)
T ss_dssp             CCC-------------CHHHHHHHHHHHHHHHHH--TTCCSEEEE
T ss_pred             CCCCCCC---CCCHHHHHHHHHHHHHHHHHHHHH--hCCCeEEEE
Confidence            9874321   122456778899999999999998  444444444

>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A

Probab=97.68  E-value=5.7e-05  Score=67.67  Aligned_cols=73  Identities=16%  Similarity=0.218  Sum_probs=45.9

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCC-CEEEEEeCCCCcccccCCCCCccccCc---ccccCcchHHhhccCCCEEEEccC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPG---VMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~---~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      ++||.|.||+|++|+.+++.|.+++ .+++++.+..+..........  .+.+   .|+.-.+  .+.++++|+||.|++
T Consensus        16 ~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~~~~~~~--~~~~~v~~dl~~~~--~~~~~~vDvVf~atp   91 (359)
T 1xyg_A           16 DIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMESVFP--HLRAQKLPTLVSVK--DADFSTVDAVFCCLP   91 (359)
T ss_dssp             CEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSCHHHHCG--GGTTSCCCCCBCGG--GCCGGGCSEEEECCC
T ss_pred             CcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCCHHHhCc--hhcCcccccceecc--hhHhcCCCEEEEcCC
Confidence            4699999999999999999999876 488888765433211110000  0111   1222111  344568999999987


Q ss_pred             C
Q 017977          126 T  126 (363)
Q Consensus       126 ~  126 (363)
                      .
T Consensus        92 ~   92 (359)
T 1xyg_A           92 H   92 (359)
T ss_dssp             T
T ss_pred             c
Confidence            5

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=97.67  E-value=2.9e-05  Score=69.53  Aligned_cols=75  Identities=20%  Similarity=0.121  Sum_probs=53.0

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccC-CCCCccccCcccccCcchHHhhc-----cCCCEEEE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF-PGKKTRFFPGVMIAEEPQWRDCI-----QGSTAVVN  122 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~-----~~~d~Vi~  122 (363)
                      .+++|||+||+|.+|..+++.+...|++|++++|++.+.+... ....   ...+|..+.+++.+.+     .++|+||+
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~---~~~~d~~~~~~~~~~~~~~~~~~~d~vi~  231 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGF---DDAFNYKEESDLTAALKRCFPNGIDIYFE  231 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCC---SEEEETTSCSCSHHHHHHHCTTCEEEEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCC---ceEEecCCHHHHHHHHHHHhCCCCcEEEE
Confidence            4568999999999999999999999999999999876654433 2211   1123554433333322     26899999


Q ss_pred             ccCC
Q 017977          123 LAGT  126 (363)
Q Consensus       123 ~a~~  126 (363)
                      ++|.
T Consensus       232 ~~g~  235 (345)
T 2j3h_A          232 NVGG  235 (345)
T ss_dssp             SSCH
T ss_pred             CCCH
Confidence            9873

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=97.67  E-value=4.5e-05  Score=63.30  Aligned_cols=65  Identities=18%  Similarity=0.306  Sum_probs=50.2

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      +|+|.|+| +|.+|+.+++.|.+.|++|++++|+++..+.+...       ++...   ++.++++++|+||.+..
T Consensus        28 ~~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~~~-------g~~~~---~~~~~~~~~DvVi~av~   92 (215)
T 2vns_A           28 APKVGILG-SGDFARSLATRLVGSGFKVVVGSRNPKRTARLFPS-------AAQVT---FQEEAVSSPEVIFVAVF   92 (215)
T ss_dssp             -CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHSBT-------TSEEE---EHHHHTTSCSEEEECSC
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc-------CCcee---cHHHHHhCCCEEEECCC
Confidence            47899999 79999999999999999999999987665544322       12222   46677889999998775

>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*

Probab=97.66  E-value=0.00012  Score=64.65  Aligned_cols=112  Identities=14%  Similarity=0.208  Sum_probs=70.6

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCC--EEEEEeCCCCccc--ccC-CCCCccccCcccccCcchHHhhccCCCEEEEc
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAE--LIF-PGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNL  123 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~--~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~  123 (363)
                      ++|||.|+|+ |.+|..++..|...|+  +|.+++|+....+  ... .... .......+....+. +.++++|+||-+
T Consensus         6 ~~mkI~IiGa-G~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~-~~~~~aD~Vii~   82 (319)
T 1lld_A            6 KPTKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGS-SFYPTVSIDGSDDP-EICRDADMVVIT   82 (319)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTG-GGSTTCEEEEESCG-GGGTTCSEEEEC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhh-hhcCCeEEEeCCCH-HHhCCCCEEEEC
Confidence            3479999997 9999999999999998  9999999864432  110 0000 00001122111122 457889999999


Q ss_pred             cCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEE
Q 017977          124 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLE  168 (363)
Q Consensus       124 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~  168 (363)
                      ++.+...   .....+.+..|......+++.+.+  .....+|..
T Consensus        83 v~~~~~~---g~~r~~~~~~n~~~~~~~~~~i~~--~~~~~~vi~  122 (319)
T 1lld_A           83 AGPRQKP---GQSRLELVGATVNILKAIMPNLVK--VAPNAIYML  122 (319)
T ss_dssp             CCCCCCT---TCCHHHHHHHHHHHHHHHHHHHHH--HCTTSEEEE
T ss_pred             CCCCCCC---CCCHHHHHHHHHHHHHHHHHHHHH--hCCCceEEE
Confidence            8754221   123456778888888888888887  333334443

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=97.65  E-value=4.1e-05  Score=66.59  Aligned_cols=66  Identities=18%  Similarity=0.290  Sum_probs=50.0

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      ||+|.|+|+||.+|+.+++.|.+.|++|++++|++...+.+...       +++..   +..+.++++|+||-+..
T Consensus        11 mm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~-------g~~~~---~~~~~~~~aDvVi~av~   76 (286)
T 3c24_A           11 PKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQGM-------GIPLT---DGDGWIDEADVVVLALP   76 (286)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHHT-------TCCCC---CSSGGGGTCSEEEECSC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHhc-------CCCcC---CHHHHhcCCCEEEEcCC
Confidence            57999999889999999999999999999999987665443221       12222   23456778999997764

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.65  E-value=1.8e-05  Score=70.29  Aligned_cols=74  Identities=15%  Similarity=0.071  Sum_probs=52.0

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHh---hc--cCCCEEEEc
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRD---CI--QGSTAVVNL  123 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~---~~--~~~d~Vi~~  123 (363)
                      ..++|+|+||+|.+|..+++.+...|++|++++|++.+.+.......   ...+|..+.+..+.   ..  .++|+||++
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~  216 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGA---WQVINYREEDLVERLKEITGGKKVRVVYDS  216 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTC---SEEEETTTSCHHHHHHHHTTTCCEEEEEEC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCC---CEEEECCCccHHHHHHHHhCCCCceEEEEC
Confidence            45699999999999999999999999999999998755443322111   11245544443332   22  258999999


Q ss_pred             cC
Q 017977          124 AG  125 (363)
Q Consensus       124 a~  125 (363)
                      +|
T Consensus       217 ~g  218 (327)
T 1qor_A          217 VG  218 (327)
T ss_dssp             SC
T ss_pred             Cc
Confidence            98

>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A

Probab=97.65  E-value=0.00013  Score=65.05  Aligned_cols=93  Identities=24%  Similarity=0.314  Sum_probs=54.3

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCC---EEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNH---QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      +++|.|.||||++|+.|++.|.+++|   ++..+.-..+........     .....+.+.+  .+.++++|+||.|++.
T Consensus         2 ~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~saG~~~~~~-----~~~~~~~~~~--~~~~~~~Dvvf~a~~~   74 (366)
T 3pwk_A            2 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLKFK-----DQDITIEETT--ETAFEGVDIALFSAGS   74 (366)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTTTCEEEET-----TEEEEEEECC--TTTTTTCSEEEECSCH
T ss_pred             CcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccccCCCcceec-----CCCceEeeCC--HHHhcCCCEEEECCCh
Confidence            46999999999999999999998765   445544322222211100     0011221111  1235789999988863


Q ss_pred             CCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEecc
Q 017977          127 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVK  171 (363)
Q Consensus       127 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~  171 (363)
                      .                   .....+..+.+  .+++ +|=.|+.
T Consensus        75 ~-------------------~s~~~a~~~~~--~G~~-vIDlSa~   97 (366)
T 3pwk_A           75 S-------------------TSAKYAPYAVK--AGVV-VVDNTSY   97 (366)
T ss_dssp             H-------------------HHHHHHHHHHH--TTCE-EEECSST
T ss_pred             H-------------------hHHHHHHHHHH--CCCE-EEEcCCc
Confidence            1                   12345555555  5664 6666765

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=97.65  E-value=6.5e-05  Score=65.86  Aligned_cols=108  Identities=19%  Similarity=0.258  Sum_probs=66.5

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCC--EEEEEeCCCCcccc----cCCCCCccccCcccccCcchHHhhccCCCEEEEcc
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAEL----IFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA  124 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~----~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a  124 (363)
                      |||.|+|| |.+|..++..|+..|+  +|.++++++.....    +.....  ......+.. ++. +.++++|+||.++
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~--~~~~~~i~~-~~~-~a~~~aDvVIi~~   75 (304)
T 2v6b_A            1 MKVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAP--VSHGTRVWH-GGH-SELADAQVVILTA   75 (304)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCC--TTSCCEEEE-ECG-GGGTTCSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhh--hcCCeEEEE-CCH-HHhCCCCEEEEcC
Confidence            58999998 9999999999999998  99999998653221    111110  011122221 223 5688999999999


Q ss_pred             CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEE
Q 017977          125 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLE  168 (363)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~  168 (363)
                      +.+...   .....+.+..|+...+.+++.+.+  .....++.+
T Consensus        76 ~~~~~~---g~~r~dl~~~n~~i~~~i~~~i~~--~~p~~~vi~  114 (304)
T 2v6b_A           76 GANQKP---GESRLDLLEKNADIFRELVPQITR--AAPDAVLLV  114 (304)
T ss_dssp             ---------------CHHHHHHHHHHHHHHHHH--HCSSSEEEE
T ss_pred             CCCCCC---CCcHHHHHHhHHHHHHHHHHHHHH--hCCCeEEEE
Confidence            764221   122345677888888899999888  333334433

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=97.63  E-value=4.5e-05  Score=68.02  Aligned_cols=75  Identities=16%  Similarity=0.092  Sum_probs=53.3

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCccccc-CCCCCccccCcccccCcchHHhhc----cCCCEEEEc
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI-FPGKKTRFFPGVMIAEEPQWRDCI----QGSTAVVNL  123 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~d~~~~~~~~~~~----~~~d~Vi~~  123 (363)
                      .+.+|||+||+|.+|..+++.+...|.+|++++|++.+.+.. .....   ...+|..+.+..+.+.    .++|+||++
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~d~vi~~  225 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGF---DGAIDYKNEDLAAGLKRECPKGIDVFFDN  225 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCC---SEEEETTTSCHHHHHHHHCTTCEEEEEES
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCC---CEEEECCCHHHHHHHHHhcCCCceEEEEC
Confidence            456899999999999999999999999999999988766554 22221   1124444443222221    268999999


Q ss_pred             cCC
Q 017977          124 AGT  126 (363)
Q Consensus       124 a~~  126 (363)
                      +|.
T Consensus       226 ~g~  228 (336)
T 4b7c_A          226 VGG  228 (336)
T ss_dssp             SCH
T ss_pred             CCc
Confidence            873

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=97.61  E-value=3.3e-05  Score=69.30  Aligned_cols=75  Identities=13%  Similarity=0.137  Sum_probs=52.4

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHH---hhcc--CCCEEEEc
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWR---DCIQ--GSTAVVNL  123 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~---~~~~--~~d~Vi~~  123 (363)
                      ...+|+|+||+|.+|..+++.+...|++|++++|++.+.+.......   ...+|..+.+..+   +...  ++|+||++
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga---~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~  246 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGA---HEVFNHREVNYIDKIKKYVGEKGIDIIIEM  246 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTC---SEEEETTSTTHHHHHHHHHCTTCEEEEEES
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHcCC---CEEEeCCCchHHHHHHHHcCCCCcEEEEEC
Confidence            34689999999999999999999999999999998766543322111   1123444443222   2222  68999999


Q ss_pred             cCC
Q 017977          124 AGT  126 (363)
Q Consensus       124 a~~  126 (363)
                      +|.
T Consensus       247 ~G~  249 (351)
T 1yb5_A          247 LAN  249 (351)
T ss_dssp             CHH
T ss_pred             CCh
Confidence            873

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=97.61  E-value=2.5e-05  Score=69.53  Aligned_cols=75  Identities=17%  Similarity=0.085  Sum_probs=52.4

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchH---Hhhc--cCCCEEEEc
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW---RDCI--QGSTAVVNL  123 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~---~~~~--~~~d~Vi~~  123 (363)
                      .+.+|+|+||+|.+|..+++.+...|++|++++|++.+.+.......   ...+|..+.+..   .+..  .++|+||++
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g~---~~~~d~~~~~~~~~i~~~~~~~~~d~vi~~  221 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKLGC---HHTINYSTQDFAEVVREITGGKGVDVVYDS  221 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTC---SEEEETTTSCHHHHHHHHHTTCCEEEEEEC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCC---CEEEECCCHHHHHHHHHHhCCCCCeEEEEC
Confidence            34689999999999999999999999999999998755443322111   112355444322   2222  268999999


Q ss_pred             cCC
Q 017977          124 AGT  126 (363)
Q Consensus       124 a~~  126 (363)
                      +|.
T Consensus       222 ~g~  224 (333)
T 1wly_A          222 IGK  224 (333)
T ss_dssp             SCT
T ss_pred             CcH
Confidence            984

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=97.61  E-value=9.1e-05  Score=65.42  Aligned_cols=110  Identities=17%  Similarity=0.229  Sum_probs=71.9

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCC--EEEEEeCCCCcccc----cCCCCCccccCcccccCcchHHhhccCCCEEEE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAEL----IFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVN  122 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~----~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~  122 (363)
                      ++|||.|+|| |.+|..++-.|+..+.  +|..++++..+.+.    +.....  ....+.+.. + -.++++++|+||.
T Consensus         8 ~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~--~~~~~~i~~-~-~~~a~~~aDvVii   82 (326)
T 2zqz_A            8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALP--FTSPKKIYS-A-EYSDAKDADLVVI   82 (326)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGG--GSCCCEEEE-C-CGGGGGGCSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHH--hcCCeEEEE-C-CHHHhCCCCEEEE
Confidence            3479999998 9999999999988775  89999997644322    111100  011222322 2 2456899999999


Q ss_pred             ccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEE
Q 017977          123 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLE  168 (363)
Q Consensus       123 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~  168 (363)
                      .++.+...   .....+.+..|+...+.+.+.+.+.  ....++.+
T Consensus        83 ~ag~~~k~---g~~R~dl~~~n~~i~~~i~~~i~~~--~p~a~iiv  123 (326)
T 2zqz_A           83 TAGAPQKP---GETRLDLVNKNLKILKSIVDPIVDS--GFNGIFLV  123 (326)
T ss_dssp             CCCCC--------CHHHHHHHHHHHHHHHHHHHHHH--TCCSEEEE
T ss_pred             cCCCCCCC---CCCHHHHHHHHHHHHHHHHHHHHHH--CCCeEEEE
Confidence            99875322   2234567889999999999999883  33444443

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=97.59  E-value=8.9e-05  Score=65.34  Aligned_cols=112  Identities=21%  Similarity=0.198  Sum_probs=70.1

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCC--EEEEEeCCCCcccccCCCCC-ccccC--cccccCcchHHhhccCCCEEEEc
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGKK-TRFFP--GVMIAEEPQWRDCIQGSTAVVNL  123 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~-~~~~~--~~d~~~~~~~~~~~~~~d~Vi~~  123 (363)
                      +++||.|+|+ |.+|..++..|+..|.  +|.++++++........... .....  ...+.. + ..+.++++|+||.+
T Consensus         5 ~~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~-~-~~~al~~aDvViia   81 (316)
T 1ldn_A            5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH-G-DYDDCRDADLVVIC   81 (316)
T ss_dssp             TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE-C-CGGGTTTCSEEEEC
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEc-C-cHHHhCCCCEEEEc
Confidence            4579999998 9999999999988774  89999998643221100000 00000  122221 1 23568899999999


Q ss_pred             cCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEE
Q 017977          124 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLE  168 (363)
Q Consensus       124 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~  168 (363)
                      ++.+.....   ...+.+..|....+.+++.+.+  .....++++
T Consensus        82 ~~~~~~~g~---~r~dl~~~n~~i~~~i~~~i~~--~~p~a~~iv  121 (316)
T 1ldn_A           82 AGANQKPGE---TRLDLVDKNIAIFRSIVESVMA--SGFQGLFLV  121 (316)
T ss_dssp             CSCCCCTTT---CSGGGHHHHHHHHHHHHHHHHH--HTCCSEEEE
T ss_pred             CCCCCCCCC---CHHHHHHcChHHHHHHHHHHHH--HCCCCEEEE
Confidence            987543222   1234566788888889998888  333434444

>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A

Probab=97.58  E-value=0.00012  Score=64.66  Aligned_cols=98  Identities=18%  Similarity=0.199  Sum_probs=57.3

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhC-CCEEEEEeCCC---CcccccC---CCCCccccCcccccCcchHHhhccCCCEEEE
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSR---SKAELIF---PGKKTRFFPGVMIAEEPQWRDCIQGSTAVVN  122 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~---~~~~~~~---~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~  122 (363)
                      |+||.|+||||++|+.|++.|.++ ++++..+..+.   +....+.   ....  ......+.+..+..++++++|+||.
T Consensus         4 M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~--~~~~~~v~~~~~~~~~~~~~Dvvf~   81 (337)
T 3dr3_A            4 MLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLK--GIVELPLQPMSDISEFSPGVDVVFL   81 (337)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGT--TTCCCBEEEESSGGGTCTTCSEEEE
T ss_pred             ceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCcccc--CccceeEeccCCHHHHhcCCCEEEE
Confidence            579999999999999999999984 56888876544   2222111   1000  0001122211022333478999998


Q ss_pred             ccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEecc
Q 017977          123 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVK  171 (363)
Q Consensus       123 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~  171 (363)
                      |.+..                   ....++..+.+  .+++ +|-.|+.
T Consensus        82 a~p~~-------------------~s~~~~~~~~~--~g~~-vIDlSa~  108 (337)
T 3dr3_A           82 ATAHE-------------------VSHDLAPQFLE--AGCV-VFDLSGA  108 (337)
T ss_dssp             CSCHH-------------------HHHHHHHHHHH--TTCE-EEECSST
T ss_pred             CCChH-------------------HHHHHHHHHHH--CCCE-EEEcCCc
Confidence            87531                   12345555555  5665 7777765

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=97.57  E-value=2.9e-05  Score=65.36  Aligned_cols=71  Identities=10%  Similarity=0.062  Sum_probs=55.7

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhh-ccCCCEEEEccC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC-IQGSTAVVNLAG  125 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~d~Vi~~a~  125 (363)
                      .++|+|+|+ |.+|+.+++.|.+.|+ |+++++++.....+. . . .....+|..+.+.+.++ ++++|.||.+.+
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-~-~-~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~   80 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR-S-G-ANFVHGDPTRVSDLEKANVRGARAVIVDLE   80 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-T-T-CEEEESCTTCHHHHHHTTCTTCSEEEECCS
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-c-C-CeEEEcCCCCHHHHHhcCcchhcEEEEcCC
Confidence            368999997 9999999999999999 999999887654433 1 1 12445688888888776 889999997764

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=97.57  E-value=8.7e-05  Score=65.50  Aligned_cols=105  Identities=17%  Similarity=0.189  Sum_probs=67.5

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCC-EEEEEeCCCCcccccCCCCCc---cccCcccccCcchHHhhccCCCEEEEcc
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKT---RFFPGVMIAEEPQWRDCIQGSTAVVNLA  124 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~~~~~~~d~Vi~~a  124 (363)
                      ++|||.|+|+ |.+|..++..|++.|+ +|.++++++...+........   .......+....++ +.++++|+||-++
T Consensus         3 ~~~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~-~a~~~aDiVi~av   80 (317)
T 2ewd_A            3 ERRKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGTDDY-ADISGSDVVIITA   80 (317)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeC
Confidence            3479999997 9999999999999998 999999987654431000000   00001112211334 5688999999999


Q ss_pred             CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhC
Q 017977          125 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES  158 (363)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  158 (363)
                      +.+......   ..+....|....+.+++.+.+.
T Consensus        81 g~p~~~g~~---r~d~~~~~~~i~~~i~~~i~~~  111 (317)
T 2ewd_A           81 SIPGRPKDD---RSELLFGNARILDSVAEGVKKY  111 (317)
T ss_dssp             CCSSCCSSC---GGGGHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCc---HHHHHHhhHHHHHHHHHHHHHH
Confidence            875432222   2234556777777888888773

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=97.57  E-value=3.6e-05  Score=69.18  Aligned_cols=75  Identities=13%  Similarity=0.069  Sum_probs=52.6

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHH---hhcc--CCCEEEEc
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWR---DCIQ--GSTAVVNL  123 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~---~~~~--~~d~Vi~~  123 (363)
                      .+.+|+|+||+|.+|..+++.+...|++|++++|++.+.+.......   ...+|..+.+..+   +...  ++|+||++
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~  238 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGA---AAGFNYKKEDFSEATLKFTKGAGVNLILDC  238 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTC---SEEEETTTSCHHHHHHHHTTTSCEEEEEES
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCC---cEEEecCChHHHHHHHHHhcCCCceEEEEC
Confidence            35689999999999999999999999999999998765444321111   1123444443322   2222  68999999


Q ss_pred             cCC
Q 017977          124 AGT  126 (363)
Q Consensus       124 a~~  126 (363)
                      +|.
T Consensus       239 ~G~  241 (354)
T 2j8z_A          239 IGG  241 (354)
T ss_dssp             SCG
T ss_pred             CCc
Confidence            984

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=97.56  E-value=0.00018  Score=63.69  Aligned_cols=103  Identities=17%  Similarity=0.225  Sum_probs=67.4

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCC-EEEEEeCCCCcccccCCCCC--c-cccCcccccCcchHHhhccCCCEEEEccC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKK--T-RFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~--~-~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      +|||.|+|| |.+|..++..|+..|+ +|.++++++...+.......  . .......+.-..++ +.++++|+||-+++
T Consensus        14 ~~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~VI~avg   91 (328)
T 2hjr_A           14 RKKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGENNY-EYLQNSDVVIITAG   91 (328)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEECCCH-HHHCCCCEEEEcCC
Confidence            369999997 9999999999999998 99999998765442100000  0 00001122222335 67899999999998


Q ss_pred             CCCCCCCChhhHHHHHHHHHHHHHHHHHHHHh
Q 017977          126 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINE  157 (363)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  157 (363)
                      .+......   ..+....|+...+.+++.+.+
T Consensus        92 ~p~k~g~t---r~dl~~~n~~i~~~i~~~i~~  120 (328)
T 2hjr_A           92 VPRKPNMT---RSDLLTVNAKIVGSVAENVGK  120 (328)
T ss_dssp             CCCCTTCC---SGGGHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCc---hhhHHhhhHHHHHHHHHHHHH
Confidence            65332211   124556677778888888887

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=97.55  E-value=4.9e-05  Score=66.82  Aligned_cols=103  Identities=17%  Similarity=0.165  Sum_probs=69.6

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCC--EEEEEeCCCCccccc----CCCCCccccCcccccCcchHHhhccCCCEEEE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELI----FPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVN  122 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~  122 (363)
                      +++||.|+|+ |.+|..++..|+..|.  +|.+++++....+..    .....  ......+.-..++++ ++++|+||-
T Consensus        20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~--~~~~~~i~~t~d~~~-~~daDiVIi   95 (330)
T 3ldh_A           20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSL--FLHTAKIVSGKDYSV-SAGSKLVVI   95 (330)
T ss_dssp             CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGG--GSCCSEEEEESSSCS-CSSCSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhh--cccCCeEEEcCCHHH-hCCCCEEEE
Confidence            4579999998 9999999999999886  999999976542211    00000  000112222223443 889999999


Q ss_pred             ccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhC
Q 017977          123 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES  158 (363)
Q Consensus       123 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  158 (363)
                      +||.+....   ....+.+..|..-.+.+++.+.+.
T Consensus        96 taG~p~kpG---~tR~dll~~N~~I~k~i~~~I~k~  128 (330)
T 3ldh_A           96 TAGARQQEG---ESRLNLVQRNVNIFKFIIPNIVKH  128 (330)
T ss_dssp             CCSCCCCSS---CCTTGGGHHHHHHHHHHHHHHHHH
T ss_pred             eCCCCCCCC---CCHHHHHHhhHHHHHHHHHHHHhh
Confidence            999753322   224567788888888999999883

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.54  E-value=0.00011  Score=63.21  Aligned_cols=69  Identities=12%  Similarity=0.087  Sum_probs=53.9

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCC-EEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      ..++++|+|+ |.+|++++..|.+.|. +|++++|+.++.+.+...        +.....+++.+.+.++|+||++...
T Consensus       116 ~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~--------~~~~~~~~~~~~~~~aDiVInaTp~  185 (277)
T 3don_A          116 EDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWSLN--------INKINLSHAESHLDEFDIIINTTPA  185 (277)
T ss_dssp             GGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCSC--------CEEECHHHHHHTGGGCSEEEECCC-
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHh--------cccccHhhHHHHhcCCCEEEECccC
Confidence            4568999996 9999999999999998 999999998776665432        2233445566778899999998764

>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*

Probab=97.54  E-value=0.00019  Score=63.65  Aligned_cols=93  Identities=20%  Similarity=0.214  Sum_probs=55.6

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCC---CEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADN---HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      ||||.|.||+|++|+.+++.|.+++   .+++++....+........     ...+.+.+.+  ...+.++|+||.|.+.
T Consensus         3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~~~~~~-----~~~i~~~~~~--~~~~~~vDvVf~a~g~   75 (336)
T 2r00_A            3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGKTYRFN-----GKTVRVQNVE--EFDWSQVHIALFSAGG   75 (336)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTCEEEET-----TEEEEEEEGG--GCCGGGCSEEEECSCH
T ss_pred             ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCCceeec-----CceeEEecCC--hHHhcCCCEEEECCCc
Confidence            5799999999999999999999873   4777776322211111100     0011222211  1234689999988764


Q ss_pred             CCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEecc
Q 017977          127 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVK  171 (363)
Q Consensus       127 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~  171 (363)
                      .                   .....+..+.+  .|++ +|-.|+.
T Consensus        76 ~-------------------~s~~~a~~~~~--~G~~-vId~s~~   98 (336)
T 2r00_A           76 E-------------------LSAKWAPIAAE--AGVV-VIDNTSH   98 (336)
T ss_dssp             H-------------------HHHHHHHHHHH--TTCE-EEECSST
T ss_pred             h-------------------HHHHHHHHHHH--cCCE-EEEcCCc
Confidence            1                   12355666666  5664 6666665

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=97.54  E-value=5.4e-05  Score=68.07  Aligned_cols=72  Identities=18%  Similarity=0.110  Sum_probs=50.8

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCC-EEEEEeCCCCcccccCC-CCCccccCcccccCcch---HHhhcc-CCCEEEEcc
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFP-GKKTRFFPGVMIAEEPQ---WRDCIQ-GSTAVVNLA  124 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~-~~~~~~~~~~d~~~~~~---~~~~~~-~~d~Vi~~a  124 (363)
                      .+|+|+||+|.+|..+++.+...|+ +|+++++++.+.+.... ...   ...+|..+.+.   +.+... ++|+||+++
T Consensus       162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~---~~~~d~~~~~~~~~~~~~~~~~~d~vi~~~  238 (357)
T 2zb4_A          162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGF---DAAINYKKDNVAEQLRESCPAGVDVYFDNV  238 (357)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCC---SEEEETTTSCHHHHHHHHCTTCEEEEEESC
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCC---ceEEecCchHHHHHHHHhcCCCCCEEEECC
Confidence            6899999999999999999999999 99999998765444322 111   11245544332   222222 589999999


Q ss_pred             C
Q 017977          125 G  125 (363)
Q Consensus       125 ~  125 (363)
                      |
T Consensus       239 G  239 (357)
T 2zb4_A          239 G  239 (357)
T ss_dssp             C
T ss_pred             C
Confidence            7

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.51  E-value=7.1e-05  Score=65.34  Aligned_cols=75  Identities=15%  Similarity=0.109  Sum_probs=54.7

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCC-EEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCCC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  127 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~~  127 (363)
                      ..++|+|+|+ |.+|+.++..|++.|. +|++++|+.++.+.+......  ... +..+.+++.+.+.++|+||++.+..
T Consensus       140 ~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~--~~~-~~~~~~~~~~~~~~aDivIn~t~~~  215 (297)
T 2egg_A          140 DGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDE--RRS-AYFSLAEAETRLAEYDIIINTTSVG  215 (297)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCS--SSC-CEECHHHHHHTGGGCSEEEECSCTT
T ss_pred             CCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhh--ccC-ceeeHHHHHhhhccCCEEEECCCCC
Confidence            4579999996 8899999999999997 999999998665544321100  000 2333356777788999999999864

>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}

Probab=97.51  E-value=0.00064  Score=62.60  Aligned_cols=76  Identities=21%  Similarity=0.364  Sum_probs=55.9

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCccc-----------ccCcchHHhhccCCCE
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVM-----------IAEEPQWRDCIQGSTA  119 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d-----------~~~~~~~~~~~~~~d~  119 (363)
                      -+|.|+| .|++|..++..|++.||+|++++|++.+.+.+..........+++           +.-..++.++++++|+
T Consensus         9 ~~~~vIG-lG~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~~aDv   87 (446)
T 4a7p_A            9 VRIAMIG-TGYVGLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAEGVKDADA   87 (446)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHTTCSE
T ss_pred             eEEEEEc-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHHHHhcCCE
Confidence            4899999 699999999999999999999999998877665532211111211           2223456677889999


Q ss_pred             EEEccCCC
Q 017977          120 VVNLAGTP  127 (363)
Q Consensus       120 Vi~~a~~~  127 (363)
                      ||-+.+.+
T Consensus        88 vii~Vptp   95 (446)
T 4a7p_A           88 VFIAVGTP   95 (446)
T ss_dssp             EEECCCCC
T ss_pred             EEEEcCCC
Confidence            99887654

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=97.50  E-value=0.00027  Score=61.69  Aligned_cols=65  Identities=12%  Similarity=0.050  Sum_probs=50.9

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      +|+|.|+| .|.+|..+++.|.+.||+|++++|++.+.+.+...         .+.-.+++.++++ +|+||-+..
T Consensus        15 ~~~I~vIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~---------g~~~~~~~~~~~~-aDvvi~~vp   79 (296)
T 3qha_A           15 QLKLGYIG-LGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEA---------GATLADSVADVAA-ADLIHITVL   79 (296)
T ss_dssp             CCCEEEEC-CSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHT---------TCEECSSHHHHTT-SSEEEECCS
T ss_pred             CCeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHC---------CCEEcCCHHHHHh-CCEEEEECC
Confidence            46899999 69999999999999999999999998876654322         1222345667778 999997764

>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*

Probab=97.46  E-value=0.00018  Score=66.52  Aligned_cols=76  Identities=28%  Similarity=0.417  Sum_probs=53.1

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCc-----------ccccCcchHHhhccCCCE
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPG-----------VMIAEEPQWRDCIQGSTA  119 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-----------~d~~~~~~~~~~~~~~d~  119 (363)
                      |+|.|+| +|++|..++..|++.|++|++++|++.+.+.+..........+           ..+.-..++.++++++|+
T Consensus         1 mkI~VIG-~G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~aDv   79 (436)
T 1mv8_A            1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDV   79 (436)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCSE
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhccCCE
Confidence            5899999 6999999999999999999999998876555433211000000           112223455667788999


Q ss_pred             EEEccCCC
Q 017977          120 VVNLAGTP  127 (363)
Q Consensus       120 Vi~~a~~~  127 (363)
                      ||-+...+
T Consensus        80 viiaVptp   87 (436)
T 1mv8_A           80 SFICVGTP   87 (436)
T ss_dssp             EEECCCCC
T ss_pred             EEEEcCCC
Confidence            99988653

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=97.44  E-value=0.00021  Score=62.68  Aligned_cols=108  Identities=22%  Similarity=0.282  Sum_probs=72.6

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCC--CEEEEEeCCCCcccc----cCCCCCccccCcccccCcchHHhhccCCCEEEEcc
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAEL----IFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA  124 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~----~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a  124 (363)
                      |||.|+|| |.+|..++-.|+..+  .+|..++++..+.+.    +.....  ......+.. +. .++++++|+||..+
T Consensus         1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~--~~~~~~v~~-~~-~~a~~~aD~Vii~a   75 (310)
T 2xxj_A            1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATP--FAHPVWVWA-GS-YGDLEGARAVVLAA   75 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGG--GSCCCEEEE-CC-GGGGTTEEEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHh--hcCCeEEEE-CC-HHHhCCCCEEEECC
Confidence            58999998 999999999999887  689999998644321    111100  011222322 22 45689999999999


Q ss_pred             CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEE
Q 017977          125 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLE  168 (363)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~  168 (363)
                      +.+....   ....+....|....+.+.+.+.+  .....++.+
T Consensus        76 g~~~~~g---~~r~dl~~~n~~i~~~i~~~i~~--~~p~a~iiv  114 (310)
T 2xxj_A           76 GVAQRPG---ETRLQLLDRNAQVFAQVVPRVLE--AAPEAVLLV  114 (310)
T ss_dssp             CCCCCTT---CCHHHHHHHHHHHHHHHHHHHHH--HCTTCEEEE
T ss_pred             CCCCCCC---cCHHHHHHhhHHHHHHHHHHHHH--HCCCcEEEE
Confidence            8753322   23456788899999999999988  333334443

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=97.44  E-value=0.00024  Score=62.71  Aligned_cols=101  Identities=19%  Similarity=0.249  Sum_probs=66.8

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCC--EEEEEeCCCCcccccCCCC--CccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGK--KTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      |||.|+|+ |.+|..++..|++.|+  +|.++++++...+......  .........+... + .+.++++|+||-+++.
T Consensus         1 mkI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~-d-~~~~~~aDvViiav~~   77 (319)
T 1a5z_A            1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAG-D-YADLKGSDVVIVAAGV   77 (319)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEEC-C-GGGGTTCSEEEECCCC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEeC-C-HHHhCCCCEEEEccCC
Confidence            58999997 9999999999999999  9999999865433221000  0000001112111 2 2457899999999886


Q ss_pred             CCCCCCChhhHHHHHHHHHHHHHHHHHHHHh
Q 017977          127 PIGTRWSSEIKKEIKESRIRVTSKVVDLINE  157 (363)
Q Consensus       127 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  157 (363)
                      +...   .....+....|....+.+++.+.+
T Consensus        78 ~~~~---g~~r~dl~~~n~~i~~~i~~~i~~  105 (319)
T 1a5z_A           78 PQKP---GETRLQLLGRNARVMKEIARNVSK  105 (319)
T ss_dssp             CCCS---SCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCC---CCCHHHHHHHHHHHHHHHHHHHHh
Confidence            4321   112456777888888899999887

>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*

Probab=97.43  E-value=0.0005  Score=61.37  Aligned_cols=105  Identities=11%  Similarity=0.151  Sum_probs=68.1

Q ss_pred             CCCccEEEEecCcchHHHHHHHHHHhCCC-----EEEEEeCCCCcc--------cccCCCCCccccCcccccCcchHHhh
Q 017977           47 KASQMTVSVTGATGFIGRRLVQRLQADNH-----QVRVLTRSRSKA--------ELIFPGKKTRFFPGVMIAEEPQWRDC  113 (363)
Q Consensus        47 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~-----~V~~~~r~~~~~--------~~~~~~~~~~~~~~~d~~~~~~~~~~  113 (363)
                      +..++||.|+||+|.||.+++-.|+..+.     .|...+.+....        .++..... .....+.+.  ..-.+.
T Consensus        29 ~~~~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~-p~~~~v~i~--~~~y~~  105 (375)
T 7mdh_A           29 WKKLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLY-PLLREVSIG--IDPYEV  105 (375)
T ss_dssp             CCCCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTC-TTEEEEEEE--SCHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhh-hhcCCcEEe--cCCHHH
Confidence            33457999999999999999999998753     265544433221        11111100 001112222  233567


Q ss_pred             ccCCCEEEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHh
Q 017977          114 IQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINE  157 (363)
Q Consensus       114 ~~~~d~Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  157 (363)
                      ++++|+||-+||.+-.   ......+.++.|..-.+.+.+++.+
T Consensus       106 ~~daDvVVitag~prk---pG~tR~DLl~~N~~I~k~i~~~i~~  146 (375)
T 7mdh_A          106 FEDVDWALLIGAKPRG---PGMERAALLDINGQIFADQGKALNA  146 (375)
T ss_dssp             TTTCSEEEECCCCCCC---TTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hCCCCEEEEcCCCCCC---CCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            8999999999987532   2334678999999999999999987

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=97.42  E-value=7.2e-05  Score=67.15  Aligned_cols=75  Identities=21%  Similarity=0.146  Sum_probs=52.9

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhc----cCCCEEEEcc
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI----QGSTAVVNLA  124 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~----~~~d~Vi~~a  124 (363)
                      ...+|+|+||+|.+|..+++.+...|.+|+++++++.+.+.......   ...+|..+.+..+.+.    .++|+||+++
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa---~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~  243 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGA---KRGINYRSEDFAAVIKAETGQGVDIILDMI  243 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTC---SEEEETTTSCHHHHHHHHHSSCEEEEEESC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCC---CEEEeCCchHHHHHHHHHhCCCceEEEECC
Confidence            45689999999999999999999999999999998876554332211   1123444433222222    3689999999


Q ss_pred             CC
Q 017977          125 GT  126 (363)
Q Consensus       125 ~~  126 (363)
                      |.
T Consensus       244 g~  245 (353)
T 4dup_A          244 GA  245 (353)
T ss_dssp             CG
T ss_pred             CH
Confidence            84

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=97.41  E-value=0.0007  Score=59.11  Aligned_cols=54  Identities=15%  Similarity=0.221  Sum_probs=44.4

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      +++|.|+||.|.+|..++..|.+.|++|++++|++..                      +..+.++++|+||-+..
T Consensus        21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~----------------------~~~~~~~~aDvVilavp   74 (298)
T 2pv7_A           21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWA----------------------VAESILANADVVIVSVP   74 (298)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGG----------------------GHHHHHTTCSEEEECSC
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCccc----------------------CHHHHhcCCCEEEEeCC
Confidence            4689999999999999999999999999999987531                      24456778888887654

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=97.41  E-value=0.00029  Score=63.08  Aligned_cols=70  Identities=17%  Similarity=0.197  Sum_probs=49.7

Q ss_pred             CCCCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCC---CEEEE
Q 017977           46 QKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGS---TAVVN  122 (363)
Q Consensus        46 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~---d~Vi~  122 (363)
                      .+..+|+|.|+| .|.+|..++..|++.|++|.+++|++.+.+.+....         +....++.++++++   |+||-
T Consensus        18 ~Mm~~mkIgiIG-lG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g---------~~~~~s~~e~~~~a~~~DvVi~   87 (358)
T 4e21_A           18 LYFQSMQIGMIG-LGRMGADMVRRLRKGGHECVVYDLNVNAVQALEREG---------IAGARSIEEFCAKLVKPRVVWL   87 (358)
T ss_dssp             ----CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTT---------CBCCSSHHHHHHHSCSSCEEEE
T ss_pred             hhhcCCEEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCC---------CEEeCCHHHHHhcCCCCCEEEE
Confidence            344557999999 799999999999999999999999987766544321         11223445555555   99997


Q ss_pred             ccC
Q 017977          123 LAG  125 (363)
Q Consensus       123 ~a~  125 (363)
                      +..
T Consensus        88 ~vp   90 (358)
T 4e21_A           88 MVP   90 (358)
T ss_dssp             CSC
T ss_pred             eCC
Confidence            764

>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*

Probab=97.41  E-value=0.00023  Score=66.32  Aligned_cols=77  Identities=19%  Similarity=0.279  Sum_probs=53.6

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCccc-----------ccCcchHHhhccCCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVM-----------IAEEPQWRDCIQGST  118 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d-----------~~~~~~~~~~~~~~d  118 (363)
                      .|+|.|+| +|++|..++..|.+.||+|++++|++.+.+.+..........+++           +.-..++.++++++|
T Consensus         8 ~~~I~VIG-~G~vG~~lA~~la~~G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~~~aD   86 (478)
T 2y0c_A            8 SMNLTIIG-SGSVGLVTGACLADIGHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAVAHGD   86 (478)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECCHHHHHHHCS
T ss_pred             CceEEEEC-cCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECCHHHHhhcCC
Confidence            37999999 699999999999999999999999987765554332111011111           112234556677899


Q ss_pred             EEEEccCCC
Q 017977          119 AVVNLAGTP  127 (363)
Q Consensus       119 ~Vi~~a~~~  127 (363)
                      +||-+...+
T Consensus        87 vviiaVptp   95 (478)
T 2y0c_A           87 VQFIAVGTP   95 (478)
T ss_dssp             EEEECCCCC
T ss_pred             EEEEEeCCC
Confidence            999887654

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.40  E-value=0.00015  Score=63.60  Aligned_cols=74  Identities=22%  Similarity=0.148  Sum_probs=52.7

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      .+.+|+|+||+|.+|..+++.+...|.+|+++++++.+.+.......   ...+|..+.+++.+.+.++|+||+ +|.
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga---~~~~~~~~~~~~~~~~~~~d~vid-~g~  198 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGA---EEAATYAEVPERAKAWGGLDLVLE-VRG  198 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTC---SEEEEGGGHHHHHHHTTSEEEEEE-CSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCC---CEEEECCcchhHHHHhcCceEEEE-CCH
Confidence            34699999999999999999999999999999998776554432211   111333331334444578999999 874

>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}

Probab=97.39  E-value=5.9e-05  Score=62.83  Aligned_cols=69  Identities=17%  Similarity=0.163  Sum_probs=48.8

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEE-EeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRV-LTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~-~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      ++||+|.|+| +|.+|..+++.|.+.|++|++ .+|+++..+.+....      +....  .+..+.++++|+||-+..
T Consensus        21 m~mmkI~IIG-~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~------g~~~~--~~~~~~~~~aDvVilavp   90 (220)
T 4huj_A           21 QSMTTYAIIG-AGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDRF------GASVK--AVELKDALQADVVILAVP   90 (220)
T ss_dssp             GGSCCEEEEE-CHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHH------TTTEE--ECCHHHHTTSSEEEEESC
T ss_pred             hcCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHh------CCCcc--cChHHHHhcCCEEEEeCC
Confidence            4467999999 799999999999999999999 888877655432210      11111  122334678999997763

>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}

Probab=97.39  E-value=0.00067  Score=62.03  Aligned_cols=81  Identities=20%  Similarity=0.276  Sum_probs=55.4

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcc-----------cccCcchHHhhccC
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGV-----------MIAEEPQWRDCIQG  116 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-----------d~~~~~~~~~~~~~  116 (363)
                      ..|.+|.|+| .|++|..++..|.+.||+|++++.++.+.+.+.....-..-.++           .+.=..+..+++.+
T Consensus        19 ~~m~~IaViG-lGYVGLp~A~~~A~~G~~V~g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~g~l~~tt~~~~ai~~   97 (444)
T 3vtf_A           19 SHMASLSVLG-LGYVGVVHAVGFALLGHRVVGYDVNPSIVERLRAGRPHIYEPGLEEALGRALSSGRLSFAESAEEAVAA   97 (444)
T ss_dssp             CCCCEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEECSSHHHHHHT
T ss_pred             CCCCEEEEEc-cCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHcCCeeEEcCHHHHHhc
Confidence            3456999998 79999999999999999999999998776655432211101111           11112345566778


Q ss_pred             CCEEEEccCCCCC
Q 017977          117 STAVVNLAGTPIG  129 (363)
Q Consensus       117 ~d~Vi~~a~~~~~  129 (363)
                      +|++|-+.+-+..
T Consensus        98 ad~~~I~VpTP~~  110 (444)
T 3vtf_A           98 TDATFIAVGTPPA  110 (444)
T ss_dssp             SSEEEECCCCCBC
T ss_pred             CCceEEEecCCCC
Confidence            9999988876533

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=97.36  E-value=0.00012  Score=65.22  Aligned_cols=75  Identities=17%  Similarity=0.097  Sum_probs=52.6

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHH---hhc--cCCCEEEEc
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWR---DCI--QGSTAVVNL  123 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~---~~~--~~~d~Vi~~  123 (363)
                      .+.+|||+||+|.+|...++.+...|.+|+++++++.+.+.......   ...+|..+.+..+   +..  .++|+||++
T Consensus       148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga---~~~~~~~~~~~~~~~~~~~~~~g~D~vid~  224 (334)
T 3qwb_A          148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGA---EYLINASKEDILRQVLKFTNGKGVDASFDS  224 (334)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTC---SEEEETTTSCHHHHHHHHTTTSCEEEEEEC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCC---cEEEeCCCchHHHHHHHHhCCCCceEEEEC
Confidence            45689999999999999999999999999999998766554332221   1123444433222   222  268999999


Q ss_pred             cCC
Q 017977          124 AGT  126 (363)
Q Consensus       124 a~~  126 (363)
                      +|.
T Consensus       225 ~g~  227 (334)
T 3qwb_A          225 VGK  227 (334)
T ss_dssp             CGG
T ss_pred             CCh
Confidence            984

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=97.36  E-value=0.00019  Score=63.09  Aligned_cols=69  Identities=19%  Similarity=0.291  Sum_probs=52.7

Q ss_pred             CCCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           47 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        47 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      ...||+|.|+| .|.+|..++..|.+.|++|++.+|++.+.+.+...       +  +.-.++..++++++|+||-+..
T Consensus        18 ~~~m~~I~iIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~-------g--~~~~~~~~~~~~~aDvvi~~vp   86 (310)
T 3doj_A           18 GSHMMEVGFLG-LGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEH-------G--ASVCESPAEVIKKCKYTIAMLS   86 (310)
T ss_dssp             CCCSCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHT-------T--CEECSSHHHHHHHCSEEEECCS
T ss_pred             cccCCEEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHC-------C--CeEcCCHHHHHHhCCEEEEEcC
Confidence            34568999999 69999999999999999999999998776654322       1  1123456667778899997764

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.36  E-value=7.6e-05  Score=66.18  Aligned_cols=75  Identities=15%  Similarity=0.052  Sum_probs=52.6

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHH---hhc--cCCCEEEEc
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWR---DCI--QGSTAVVNL  123 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~---~~~--~~~d~Vi~~  123 (363)
                      .+.+|||+||+|.+|...++.+...|.+|+++++++.+.+.......   ...+|..+.+..+   +..  .++|+||++
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga---~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~  216 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGA---WETIDYSHEDVAKRVLELTDGKKCPVVYDG  216 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTC---SEEEETTTSCHHHHHHHHTTTCCEEEEEES
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCC---CEEEeCCCccHHHHHHHHhCCCCceEEEEC
Confidence            45689999999999999999999999999999998766554332211   1123444433222   222  268999999


Q ss_pred             cCC
Q 017977          124 AGT  126 (363)
Q Consensus       124 a~~  126 (363)
                      +|.
T Consensus       217 ~g~  219 (325)
T 3jyn_A          217 VGQ  219 (325)
T ss_dssp             SCG
T ss_pred             CCh
Confidence            984

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=97.35  E-value=0.00037  Score=60.39  Aligned_cols=77  Identities=10%  Similarity=0.087  Sum_probs=51.8

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCc--------c-ccCc--c-----cccCcchHHh
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKT--------R-FFPG--V-----MIAEEPQWRD  112 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~--------~-~~~~--~-----d~~~~~~~~~  112 (363)
                      .+++|.|+|+ |.+|+.++..|++.|++|++++|+++..+........        . ....  .     .+.-..++.+
T Consensus         3 ~~~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~   81 (283)
T 4e12_A            3 GITNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLAQ   81 (283)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHHH
Confidence            3569999995 9999999999999999999999988664433211000        0 0000  0     0122345667


Q ss_pred             hccCCCEEEEccCC
Q 017977          113 CIQGSTAVVNLAGT  126 (363)
Q Consensus       113 ~~~~~d~Vi~~a~~  126 (363)
                      +++++|+||-+...
T Consensus        82 ~~~~aDlVi~av~~   95 (283)
T 4e12_A           82 AVKDADLVIEAVPE   95 (283)
T ss_dssp             HTTTCSEEEECCCS
T ss_pred             HhccCCEEEEeccC
Confidence            78899999988753

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=97.34  E-value=7e-05  Score=65.59  Aligned_cols=78  Identities=18%  Similarity=0.193  Sum_probs=53.3

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCC-EEEEEeCC---CCcccccCCCCCcc---ccCcccccCcchHHhhccCCCEE
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRS---RSKAELIFPGKKTR---FFPGVMIAEEPQWRDCIQGSTAV  120 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~---~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~~d~V  120 (363)
                      ...++++|+|+ |.+|++++..|.+.|. +|++++|+   .++.+.+.......   .....++.+.+++.+.+.++|+|
T Consensus       152 l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aDiI  230 (315)
T 3tnl_A          152 IIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVIF  230 (315)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEE
T ss_pred             ccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCCEE
Confidence            34579999997 8999999999999998 99999999   43333321110000   01112333445677778899999


Q ss_pred             EEccCC
Q 017977          121 VNLAGT  126 (363)
Q Consensus       121 i~~a~~  126 (363)
                      |++...
T Consensus       231 INaTp~  236 (315)
T 3tnl_A          231 TNATGV  236 (315)
T ss_dssp             EECSST
T ss_pred             EECccC
Confidence            998865

>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*

Probab=97.34  E-value=0.00024  Score=64.88  Aligned_cols=80  Identities=16%  Similarity=0.221  Sum_probs=52.7

Q ss_pred             CCCCCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCc---------ccccCcchHHhhcc
Q 017977           45 TQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPG---------VMIAEEPQWRDCIQ  115 (363)
Q Consensus        45 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~---------~d~~~~~~~~~~~~  115 (363)
                      .....+|+|.|+| +|++|..++..|.+ |++|++++|++.+.+.+..........+         ..+.-..++.++++
T Consensus        31 ~r~~~~mkIaVIG-lG~mG~~lA~~La~-G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~ttd~~ea~~  108 (432)
T 3pid_A           31 GRGSEFMKITISG-TGYVGLSNGVLIAQ-NHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRATTDKHDAYR  108 (432)
T ss_dssp             ----CCCEEEEEC-CSHHHHHHHHHHHT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHT
T ss_pred             ccccCCCEEEEEC-cCHHHHHHHHHHHc-CCeEEEEecCHHHhhHHhccCCccccccHHHHHhhccCCeEEEcCHHHHHh
Confidence            3445668999999 69999999999888 9999999999877655443211000000         01222345667788


Q ss_pred             CCCEEEEccCC
Q 017977          116 GSTAVVNLAGT  126 (363)
Q Consensus       116 ~~d~Vi~~a~~  126 (363)
                      ++|+||-+...
T Consensus       109 ~aDvViiaVPt  119 (432)
T 3pid_A          109 NADYVIIATPT  119 (432)
T ss_dssp             TCSEEEECCCC
T ss_pred             CCCEEEEeCCC
Confidence            99999987643

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=97.33  E-value=0.0001  Score=63.65  Aligned_cols=78  Identities=21%  Similarity=0.171  Sum_probs=55.4

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCC-EEEEEeCCCCcccccCCCCCcc-ccCcccccCcchHHhhccCCCEEEEccC
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTR-FFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      ...++++|+|+ |.+|+.++..|.+.|. +|++++|+.++.+.+....... ....+...+.+++.+.+.++|+||++..
T Consensus       125 l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~~l~~~DiVInaTp  203 (283)
T 3jyo_A          125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVVNATP  203 (283)
T ss_dssp             CCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTHHHHHHHSSEEEECSS
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHHHHHHhcCCEEEECCC
Confidence            34579999997 9999999999999998 7999999987655432211000 0011233345577778889999999886


Q ss_pred             C
Q 017977          126 T  126 (363)
Q Consensus       126 ~  126 (363)
                      .
T Consensus       204 ~  204 (283)
T 3jyo_A          204 M  204 (283)
T ss_dssp             T
T ss_pred             C
Confidence            5

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=97.33  E-value=9.8e-05  Score=66.00  Aligned_cols=74  Identities=18%  Similarity=0.038  Sum_probs=52.2

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcc---hHHhhc--cCCCEEEEc
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEP---QWRDCI--QGSTAVVNL  123 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~~--~~~d~Vi~~  123 (363)
                      ..++|||+||+|.+|..+++.+...|++|++++|++.+.+.......   ...+|..+.+   .+.+..  .++|+||++
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~ga---~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~  242 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGA---DETVNYTHPDWPKEVRRLTGGKGADKVVDH  242 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTC---SEEEETTSTTHHHHHHHHTTTTCEEEEEES
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCC---CEEEcCCcccHHHHHHHHhCCCCceEEEEC
Confidence            45699999999999999999999999999999998766544322111   1123444433   233333  268999999


Q ss_pred             cC
Q 017977          124 AG  125 (363)
Q Consensus       124 a~  125 (363)
                      +|
T Consensus       243 ~g  244 (343)
T 2eih_A          243 TG  244 (343)
T ss_dssp             SC
T ss_pred             CC
Confidence            98

>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8

Probab=97.33  E-value=0.0017  Score=49.49  Aligned_cols=86  Identities=14%  Similarity=0.163  Sum_probs=56.3

Q ss_pred             ccEEEEecCc---chHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           50 QMTVSVTGAT---GFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        50 ~~~vlVtGat---G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      .++|.|+|+|   |.+|+.+++.|++.|++|+.++.+..+.            .+  ..-..++.++.+.+|+++-+...
T Consensus        14 p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~i------------~G--~~~~~s~~el~~~vDlvii~vp~   79 (138)
T 1y81_A           14 FRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEI------------EG--LKCYRSVRELPKDVDVIVFVVPP   79 (138)
T ss_dssp             CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE------------TT--EECBSSGGGSCTTCCEEEECSCH
T ss_pred             CCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCeE------------CC--eeecCCHHHhCCCCCEEEEEeCH
Confidence            3589999987   9999999999999999988877654221            11  11223344555678999866531


Q ss_pred             CCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEec
Q 017977          127 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELV  170 (363)
Q Consensus       127 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS  170 (363)
                                         .....+++.+.+  .+++.++..++
T Consensus        80 -------------------~~v~~v~~~~~~--~g~~~i~~~~~  102 (138)
T 1y81_A           80 -------------------KVGLQVAKEAVE--AGFKKLWFQPG  102 (138)
T ss_dssp             -------------------HHHHHHHHHHHH--TTCCEEEECTT
T ss_pred             -------------------HHHHHHHHHHHH--cCCCEEEEcCc
Confidence                               112355666666  57776555443

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=97.32  E-value=0.00066  Score=59.40  Aligned_cols=39  Identities=23%  Similarity=0.365  Sum_probs=34.5

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCccc
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE   88 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~   88 (363)
                      .+++|.|+|+ |.+|..++..|++.|++|++++|+++..+
T Consensus        14 ~~~~I~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~   52 (302)
T 1f0y_A           14 IVKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILA   52 (302)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred             cCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHH
Confidence            3578999996 99999999999999999999999876544

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.32  E-value=0.00015  Score=64.70  Aligned_cols=75  Identities=17%  Similarity=0.182  Sum_probs=52.9

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHH---hhc--cCCCEEEEc
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWR---DCI--QGSTAVVNL  123 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~---~~~--~~~d~Vi~~  123 (363)
                      .+.+|+|+||+|.+|...++.+...|.+|+++++++.+.+.......   ...+|..+.+..+   +..  .++|+||++
T Consensus       144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga---~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~  220 (340)
T 3gms_A          144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGA---AYVIDTSTAPLYETVMELTNGIGADAAIDS  220 (340)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTC---SEEEETTTSCHHHHHHHHTTTSCEEEEEES
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCC---cEEEeCCcccHHHHHHHHhCCCCCcEEEEC
Confidence            45699999999999999999999999999999998877554432211   1123444433222   222  268999999


Q ss_pred             cCC
Q 017977          124 AGT  126 (363)
Q Consensus       124 a~~  126 (363)
                      +|.
T Consensus       221 ~g~  223 (340)
T 3gms_A          221 IGG  223 (340)
T ss_dssp             SCH
T ss_pred             CCC
Confidence            984

>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}

Probab=97.32  E-value=0.00031  Score=62.91  Aligned_cols=34  Identities=38%  Similarity=0.585  Sum_probs=29.4

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCC-CEEEEEeCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRS   83 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~   83 (363)
                      ++||.|.||+|++|+.+++.|.+++ .+|.++.++
T Consensus         8 ~~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s   42 (354)
T 1ys4_A            8 KIKVGVLGATGSVGQRFVQLLADHPMFELTALAAS   42 (354)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEEC
T ss_pred             cceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcc
Confidence            3699999999999999999998875 688888754

>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}

Probab=97.31  E-value=0.0011  Score=61.35  Aligned_cols=77  Identities=22%  Similarity=0.245  Sum_probs=52.9

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhC-CC-EEEEEeCCCC----cccccCCCCCcc--ccCc-----------ccccCcch
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQAD-NH-QVRVLTRSRS----KAELIFPGKKTR--FFPG-----------VMIAEEPQ  109 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~-g~-~V~~~~r~~~----~~~~~~~~~~~~--~~~~-----------~d~~~~~~  109 (363)
                      ++|+|.|+| .|++|..++..|++. || +|++++|++.    +.+.+.......  ...+           ..+.-..+
T Consensus        17 ~~mkIaVIG-lG~mG~~lA~~la~~~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~ttd   95 (478)
T 3g79_A           17 PIKKIGVLG-MGYVGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFECTPD   95 (478)
T ss_dssp             SCCEEEEEC-CSTTHHHHHHHHHHSTTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEEESC
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHhCCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeEEeCc
Confidence            457999999 699999999999999 99 9999999998    655554322100  0000           01111112


Q ss_pred             HHhhccCCCEEEEccCCC
Q 017977          110 WRDCIQGSTAVVNLAGTP  127 (363)
Q Consensus       110 ~~~~~~~~d~Vi~~a~~~  127 (363)
                       .++++++|+||-+.+.+
T Consensus        96 -~ea~~~aDvViiaVptp  112 (478)
T 3g79_A           96 -FSRISELDAVTLAIQTP  112 (478)
T ss_dssp             -GGGGGGCSEEEECCCCC
T ss_pred             -HHHHhcCCEEEEecCCc
Confidence             35678899999888754

>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1

Probab=97.31  E-value=0.00024  Score=62.44  Aligned_cols=114  Identities=11%  Similarity=0.107  Sum_probs=69.1

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCC--CEEEEEeCCCCcccccCCCCC--c-cccCcccccCcchHHhhccCCCEEEEcc
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPGKK--T-RFFPGVMIAEEPQWRDCIQGSTAVVNLA  124 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~--~-~~~~~~d~~~~~~~~~~~~~~d~Vi~~a  124 (363)
                      ||||.|+| +|.+|..++..|++.|  ++|.+++|++...+.......  . .......+. ..++ +.++++|+||-++
T Consensus         1 m~kI~VIG-aG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~d~-~~~~~aDvViiav   77 (309)
T 1hyh_A            1 ARKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIV-INDW-AALADADVVISTL   77 (309)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEE-ESCG-GGGTTCSEEEECC
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEE-eCCH-HHhCCCCEEEEec
Confidence            47999999 6999999999999999  899999998755432211000  0 000012221 1234 5678999999988


Q ss_pred             CCCCCC-CCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEE
Q 017977          125 GTPIGT-RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLE  168 (363)
Q Consensus       125 ~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~  168 (363)
                      +.+... ........+....|+.....+++.+.+  .....+|.+
T Consensus        78 ~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~--~~~~~~ii~  120 (309)
T 1hyh_A           78 GNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKE--SGFHGVLVV  120 (309)
T ss_dssp             SCGGGTC-------CTTHHHHHHHHHHHHHHHHH--TTCCSEEEE
T ss_pred             CCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHH--HCCCcEEEE
Confidence            763210 000111234566788888888888887  333444443

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=97.29  E-value=0.00099  Score=56.05  Aligned_cols=73  Identities=22%  Similarity=0.258  Sum_probs=49.5

Q ss_pred             cEEEEecCcchHHHHHHHHHHhC-CCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhc-----cCCCEEEEcc
Q 017977           51 MTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI-----QGSTAVVNLA  124 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-----~~~d~Vi~~a  124 (363)
                      |||+|+|++|.+|+.+++.+.+. ++++.++.......+.+.....   -.-+|++.++...+.+     .++++|+-..
T Consensus         1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~~~~---DvvIDfT~p~a~~~~~~~a~~~g~~~VigTT   77 (245)
T 1p9l_A            1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTDGNT---EVVIDFTHPDVVMGNLEFLIDNGIHAVVGTT   77 (245)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHHTTC---CEEEECSCTTTHHHHHHHHHHTTCEEEECCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhccCC---cEEEEccChHHHHHHHHHHHHcCCCEEEcCC
Confidence            58999999999999999999865 8999877654433322211110   2336777777665444     2678888666


Q ss_pred             CC
Q 017977          125 GT  126 (363)
Q Consensus       125 ~~  126 (363)
                      |.
T Consensus        78 G~   79 (245)
T 1p9l_A           78 GF   79 (245)
T ss_dssp             CC
T ss_pred             CC
Confidence            53

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=97.29  E-value=0.00037  Score=63.62  Aligned_cols=73  Identities=14%  Similarity=0.036  Sum_probs=57.9

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhh-ccCCCEEEEccC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC-IQGSTAVVNLAG  125 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~d~Vi~~a~  125 (363)
                      .|+|+|+|. |.+|+.+++.|.+.|++|+++++++.....+....  .....+|.++.+.+.++ ++++|+||-+..
T Consensus         4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~g--~~vi~GDat~~~~L~~agi~~A~~viv~~~   77 (413)
T 3l9w_A            4 GMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFG--MKVFYGDATRMDLLESAGAAKAEVLINAID   77 (413)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHTT--CCCEESCTTCHHHHHHTTTTTCSEEEECCS
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhCC--CeEEEcCCCCHHHHHhcCCCccCEEEECCC
Confidence            368999995 99999999999999999999999987755443221  11344688899888876 788999997765

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.29  E-value=0.00019  Score=64.89  Aligned_cols=77  Identities=16%  Similarity=0.083  Sum_probs=55.8

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCCC
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  127 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~~  127 (363)
                      ..+++|+|+|+ |.+|+.+++.+...|.+|++++|++.+.+........  ....+..+.+++.+.+.++|+||.+++.+
T Consensus       166 l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~--~~~~~~~~~~~l~~~l~~aDvVi~~~~~p  242 (377)
T 2vhw_A          166 VEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCG--RIHTRYSSAYELEGAVKRADLVIGAVLVP  242 (377)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTT--SSEEEECCHHHHHHHHHHCSEEEECCCCT
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCC--eeEeccCCHHHHHHHHcCCCEEEECCCcC
Confidence            34579999997 9999999999999999999999988664433211000  11123334556777888999999988754

>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}

Probab=97.28  E-value=0.00058  Score=57.39  Aligned_cols=35  Identities=14%  Similarity=0.348  Sum_probs=29.2

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEE-EeCCCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRV-LTRSRS   85 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~-~~r~~~   85 (363)
                      ||||.|+|+ |.+|+.+++.+.+.++++.+ ++|+..
T Consensus         3 MmkI~ViGa-GrMG~~i~~~l~~~~~eLva~~d~~~~   38 (243)
T 3qy9_A            3 SMKILLIGY-GAMNQRVARLAEEKGHEIVGVIENTPK   38 (243)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEECSSCC
T ss_pred             ceEEEEECc-CHHHHHHHHHHHhCCCEEEEEEecCcc
Confidence            689999999 99999999999988777776 455543

>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A

Probab=97.26  E-value=0.00087  Score=59.34  Aligned_cols=67  Identities=24%  Similarity=0.401  Sum_probs=42.3

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCC---EEEEEeCCCCcccccCCCCCccccCccccc--CcchHHhhccCCCEEEEccC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNH---QVRVLTRSRSKAELIFPGKKTRFFPGVMIA--EEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~--~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      ++|.|.||||++|..|++.|.++.|   ++..+.-..+....+.       +.+.|+.  +.+  .+.++++|+||.|++
T Consensus         2 ~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~~~aG~~~~-------~~~~~~~~~~~~--~~~~~~~Dvvf~a~~   72 (344)
T 3tz6_A            2 LSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASARSQGRKLA-------FRGQEIEVEDAE--TADPSGLDIALFSAG   72 (344)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTSSCEEE-------ETTEEEEEEETT--TSCCTTCSEEEECSC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCceEEEEEECcccCCCcee-------ecCCceEEEeCC--HHHhccCCEEEECCC
Confidence            6899999999999999999998754   4565553333222221       1111221  111  133578999998886


Q ss_pred             C
Q 017977          126 T  126 (363)
Q Consensus       126 ~  126 (363)
                      .
T Consensus        73 ~   73 (344)
T 3tz6_A           73 S   73 (344)
T ss_dssp             H
T ss_pred             h
Confidence            4

>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A

Probab=97.26  E-value=0.00076  Score=58.82  Aligned_cols=101  Identities=17%  Similarity=0.188  Sum_probs=65.8

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCC--EEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      .++||.|+|| |.+|..++..|+..|+  +|..+++++........... .....+..+  .++ +.++++|+||-+++.
T Consensus        13 ~~~kV~ViGa-G~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~~-~~~~~i~~t--~d~-~~l~~aD~Vi~aag~   87 (303)
T 2i6t_A           13 TVNKITVVGG-GELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEI-FNLPNVEIS--KDL-SASAHSKVVIFTVNS   87 (303)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHHH-HTCTTEEEE--SCG-GGGTTCSEEEECCCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHhh-hcCCCeEEe--CCH-HHHCCCCEEEEcCCC
Confidence            3479999996 9999999999999998  99999998741100000000 001112221  235 668999999999987


Q ss_pred             CCCCCCChhhHHHHHHHHHHHHHHHHHHHHhC
Q 017977          127 PIGTRWSSEIKKEIKESRIRVTSKVVDLINES  158 (363)
Q Consensus       127 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  158 (363)
                      . .   ......+....|+.-.+.+++.+.+.
T Consensus        88 ~-~---pG~tR~dl~~~n~~i~~~i~~~i~~~  115 (303)
T 2i6t_A           88 L-G---SSQSYLDVVQSNVDMFRALVPALGHY  115 (303)
T ss_dssp             --------CCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             C-C---CCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence            4 2   12234677888998899999999883

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=97.25  E-value=9.8e-05  Score=68.58  Aligned_cols=75  Identities=13%  Similarity=0.244  Sum_probs=57.5

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhh-ccCCCEEEEccC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC-IQGSTAVVNLAG  125 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~d~Vi~~a~  125 (363)
                      +.|||+|.|+ |.+|++|++.|.++||+|+++++++.....+...... ....+|-++++.++++ ++++|.+|-+.+
T Consensus         2 ~~M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~-~~i~Gd~~~~~~L~~Agi~~ad~~ia~t~   77 (461)
T 4g65_A            2 NAMKIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDL-RVVNGHASHPDVLHEAGAQDADMLVAVTN   77 (461)
T ss_dssp             CCEEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSC-EEEESCTTCHHHHHHHTTTTCSEEEECCS
T ss_pred             CcCEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCc-EEEEEcCCCHHHHHhcCCCcCCEEEEEcC
Confidence            3589999995 9999999999999999999999998776554332211 1334688888888776 678999985543

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.25  E-value=0.00019  Score=64.61  Aligned_cols=74  Identities=20%  Similarity=0.126  Sum_probs=50.9

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhc-----cCCCEEEEc
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI-----QGSTAVVNL  123 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-----~~~d~Vi~~  123 (363)
                      .+.+|||+||+|.+|..+++.+...|.+|+++++++.+.+.....+.   ...+|..+.+ +.+.+     .++|+||++
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga---~~~~~~~~~~-~~~~~~~~~~~g~D~vid~  238 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGC---DRPINYKTEP-VGTVLKQEYPEGVDVVYES  238 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTC---SEEEETTTSC-HHHHHHHHCTTCEEEEEEC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCC---cEEEecCChh-HHHHHHHhcCCCCCEEEEC
Confidence            34689999999999999999999999999999998765444332211   1112333322 22222     368999999


Q ss_pred             cCC
Q 017977          124 AGT  126 (363)
Q Consensus       124 a~~  126 (363)
                      ++.
T Consensus       239 ~g~  241 (362)
T 2c0c_A          239 VGG  241 (362)
T ss_dssp             SCT
T ss_pred             CCH
Confidence            873

>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}

Probab=97.24  E-value=0.00054  Score=61.18  Aligned_cols=33  Identities=24%  Similarity=0.537  Sum_probs=28.5

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCC-CEEEEEe
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLT   81 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~   81 (363)
                      +|+||.|.||+|++|+.+++.|.++. .++.++.
T Consensus         3 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~   36 (350)
T 2ep5_A            3 DKIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVS   36 (350)
T ss_dssp             CCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEE
T ss_pred             CCcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEe
Confidence            35799999999999999999998765 5888885

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.24  E-value=0.0004  Score=62.61  Aligned_cols=74  Identities=16%  Similarity=0.153  Sum_probs=54.8

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccC-CCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF-PGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      ...+|||+|+ |.+|...++.+...|.+|+++++++.+.+... ..+.   ...+|..+.+.+.+...++|+||++++.
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa---~~v~~~~~~~~~~~~~~~~D~vid~~g~  261 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGA---DSFLVSRDQEQMQAAAGTLDGIIDTVSA  261 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCC---SEEEETTCHHHHHHTTTCEEEEEECCSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCC---ceEEeccCHHHHHHhhCCCCEEEECCCc
Confidence            4468999996 99999999999999999999999887654433 2211   1123444555666666789999999985

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=97.23  E-value=0.00028  Score=62.31  Aligned_cols=68  Identities=19%  Similarity=0.242  Sum_probs=53.0

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      ..+|+|.|+| .|.+|..+++.|.+.|++|++.+|++++.+.+....         +.-.+++.++++++|+||-+..
T Consensus        29 ~~~~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g---------~~~~~~~~e~~~~aDvVi~~vp   96 (320)
T 4dll_A           29 PYARKITFLG-TGSMGLPMARRLCEAGYALQVWNRTPARAASLAALG---------ATIHEQARAAARDADIVVSMLE   96 (320)
T ss_dssp             CCCSEEEEEC-CTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTT---------CEEESSHHHHHTTCSEEEECCS
T ss_pred             cCCCEEEEEC-ccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCC---------CEeeCCHHHHHhcCCEEEEECC
Confidence            4567999998 599999999999999999999999987766544321         1223456677889999997764

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=97.23  E-value=0.00011  Score=63.40  Aligned_cols=73  Identities=15%  Similarity=0.152  Sum_probs=49.5

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhc-cCCCEEEEccCCC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI-QGSTAVVNLAGTP  127 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-~~~d~Vi~~a~~~  127 (363)
                      ..++|+|+|+ |.+|++++..|++.|++|++++|+.++.+.+......  ...++..+.+   ++. .++|+||++++..
T Consensus       118 ~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~--~~~~~~~~~~---~~~~~~~DivIn~t~~~  191 (272)
T 1p77_A          118 PNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQP--YGNIQAVSMD---SIPLQTYDLVINATSAG  191 (272)
T ss_dssp             TTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGG--GSCEEEEEGG---GCCCSCCSEEEECCCC-
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccc--cCCeEEeeHH---HhccCCCCEEEECCCCC
Confidence            4579999997 8899999999999999999999998665444221000  0012222222   222 3799999999863

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=97.23  E-value=0.00018  Score=64.40  Aligned_cols=75  Identities=20%  Similarity=0.139  Sum_probs=52.7

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhC-CCEEEEEeCCCCcccccCCCCCccccCcccccCcch---HHhhc--cCCCEEEE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQ---WRDCI--QGSTAVVN  122 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~---~~~~~--~~~d~Vi~  122 (363)
                      ...+|+|+||+|.+|..+++.+... |.+|+++++++.+.+.......   ...+|..+.+.   +.+..  .++|+||+
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~~d~vi~  246 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGA---DYVINASMQDPLAEIRRITESKGVDAVID  246 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTC---SEEEETTTSCHHHHHHHHTTTSCEEEEEE
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCC---CEEecCCCccHHHHHHHHhcCCCceEEEE
Confidence            4468999999999999999999998 9999999998766443322111   11234444433   34444  36899999


Q ss_pred             ccCC
Q 017977          123 LAGT  126 (363)
Q Consensus       123 ~a~~  126 (363)
                      ++|.
T Consensus       247 ~~g~  250 (347)
T 1jvb_A          247 LNNS  250 (347)
T ss_dssp             SCCC
T ss_pred             CCCC
Confidence            9985

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=97.22  E-value=0.00026  Score=60.74  Aligned_cols=67  Identities=13%  Similarity=0.152  Sum_probs=48.7

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCE-EEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQ-VRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      +|+|.|+|+ |.+|+.++..|.+.|++ |.+++|++...+.+....      ++..  ..++.++++++|+||-+..
T Consensus        10 ~m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~------g~~~--~~~~~~~~~~~Dvvi~av~   77 (266)
T 3d1l_A           10 DTPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESARELAQKV------EAEY--TTDLAEVNPYAKLYIVSLK   77 (266)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHT------TCEE--ESCGGGSCSCCSEEEECCC
T ss_pred             CCeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHc------CCce--eCCHHHHhcCCCEEEEecC
Confidence            479999995 99999999999999998 889999876654432210      1111  2345566788999997764

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=97.21  E-value=0.00014  Score=64.08  Aligned_cols=76  Identities=17%  Similarity=0.215  Sum_probs=48.5

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccc------cCcccccCcchHHhhccCCCEEEE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRF------FPGVMIAEEPQWRDCIQGSTAVVN  122 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~------~~~~d~~~~~~~~~~~~~~d~Vi~  122 (363)
                      +||+|.|+|+ |.+|..++..|.+.|++|++++|+++..+.+........      ...++..+.+++.+.++++|+||-
T Consensus         2 ~~m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~   80 (316)
T 2ew2_A            2 NAMKIAIAGA-GAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIA   80 (316)
T ss_dssp             --CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCCSEEEE
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCCCEEEE
Confidence            3579999995 999999999999999999999998765443321110000      001222233333334558999997


Q ss_pred             ccC
Q 017977          123 LAG  125 (363)
Q Consensus       123 ~a~  125 (363)
                      +..
T Consensus        81 ~v~   83 (316)
T 2ew2_A           81 LTK   83 (316)
T ss_dssp             CSC
T ss_pred             Eec
Confidence            764

>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*

Probab=97.20  E-value=0.00048  Score=61.47  Aligned_cols=36  Identities=22%  Similarity=0.359  Sum_probs=28.5

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCC-CEEEEEeCCC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSR   84 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~   84 (363)
                      ++++|.|.||||++|..|++.|.++. .++..+..+.
T Consensus         6 ~~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~   42 (359)
T 4dpk_A            6 RTLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKG   42 (359)
T ss_dssp             CCEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEEST
T ss_pred             CCCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECch
Confidence            45699999999999999999887765 4777665433

>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*

Probab=97.20  E-value=0.00048  Score=61.47  Aligned_cols=36  Identities=22%  Similarity=0.359  Sum_probs=28.5

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCC-CEEEEEeCCC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSR   84 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~   84 (363)
                      ++++|.|.||||++|..|++.|.++. .++..+..+.
T Consensus         6 ~~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~   42 (359)
T 4dpl_A            6 RTLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKG   42 (359)
T ss_dssp             CCEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEEST
T ss_pred             CCCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECch
Confidence            45699999999999999999887765 4777665433

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.20  E-value=0.00019  Score=64.50  Aligned_cols=75  Identities=9%  Similarity=0.135  Sum_probs=54.3

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  127 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~~  127 (363)
                      .++|+|+|+ |.+|+.+++.|...|.+|++++|++.+.+........  .......+.+++.+.+.++|+||++++.+
T Consensus       167 ~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~DvVI~~~~~~  241 (361)
T 1pjc_A          167 PGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS--RVELLYSNSAEIETAVAEADLLIGAVLVP  241 (361)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG--GSEEEECCHHHHHHHHHTCSEEEECCCCT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCc--eeEeeeCCHHHHHHHHcCCCEEEECCCcC
Confidence            369999998 9999999999999999999999988765443221100  00111223456677778999999999864

>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}

Probab=97.19  E-value=0.0027  Score=56.82  Aligned_cols=71  Identities=15%  Similarity=0.225  Sum_probs=41.8

Q ss_pred             ccEEEEecCcchHHHHHHH-HHHhCC---CEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           50 QMTVSVTGATGFIGRRLVQ-RLQADN---HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~-~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      .++|.|.||||++|+.|++ .|.++.   .++..++-+ +..........    ....+.+..+. +.++++|+||.|++
T Consensus         4 ~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~-~aG~~~~~~~~----~~~~v~~~~~~-~~~~~vDvvf~a~~   77 (377)
T 3uw3_A            4 SMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTS-NAGGKAPSFAK----NETTLKDATSI-DDLKKCDVIITCQG   77 (377)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESS-CTTSBCCTTCC----SCCBCEETTCH-HHHHTCSEEEECSC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEech-hcCCCHHHcCC----CceEEEeCCCh-hHhcCCCEEEECCC
Confidence            4799999999999999999 666666   366665433 22222111100    01122222122 23578999998886


Q ss_pred             C
Q 017977          126 T  126 (363)
Q Consensus       126 ~  126 (363)
                      .
T Consensus        78 ~   78 (377)
T 3uw3_A           78 G   78 (377)
T ss_dssp             H
T ss_pred             h
Confidence            4

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.19  E-value=0.00026  Score=63.22  Aligned_cols=74  Identities=23%  Similarity=0.203  Sum_probs=50.8

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcc---hHHhhcc--CCCEEEEc
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEP---QWRDCIQ--GSTAVVNL  123 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~~~--~~d~Vi~~  123 (363)
                      .+.+|||+||+|.+|...++.+...|.+|+++++++.+.+.......   ...+|.. .+   .+.+...  ++|+||++
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga---~~v~~~~-~~~~~~v~~~~~~~g~Dvvid~  234 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGA---DIVLPLE-EGWAKAVREATGGAGVDMVVDP  234 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTC---SEEEESS-TTHHHHHHHHTTTSCEEEEEES
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCC---cEEecCc-hhHHHHHHHHhCCCCceEEEEC
Confidence            45689999999999999999999999999999998876544332211   1112222 11   2222222  58999999


Q ss_pred             cCC
Q 017977          124 AGT  126 (363)
Q Consensus       124 a~~  126 (363)
                      +|.
T Consensus       235 ~g~  237 (342)
T 4eye_A          235 IGG  237 (342)
T ss_dssp             CC-
T ss_pred             Cch
Confidence            985

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=97.17  E-value=0.00025  Score=62.10  Aligned_cols=68  Identities=12%  Similarity=0.053  Sum_probs=49.3

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      ++|+|.|+| .|.+|..++..|.+.|++|++.+|++.+.+.+.....       .. -..++.++++++|+||-+..
T Consensus         6 ~~~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~-------~~-~~~~~~e~~~~aDvvi~~vp   73 (303)
T 3g0o_A            6 TDFHVGIVG-LGSMGMGAARSCLRAGLSTWGADLNPQACANLLAEGA-------CG-AAASAREFAGVVDALVILVV   73 (303)
T ss_dssp             -CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTC-------SE-EESSSTTTTTTCSEEEECCS
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCC-------cc-ccCCHHHHHhcCCEEEEECC
Confidence            347999998 6999999999999999999999999876555432211       11 02344556678888887664

>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}

Probab=97.17  E-value=0.00043  Score=64.68  Aligned_cols=78  Identities=17%  Similarity=0.216  Sum_probs=53.0

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhC--CCEEEEEeCCCCcccccCCCCCccccCcc----------cccCcchHHhhccC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQAD--NHQVRVLTRSRSKAELIFPGKKTRFFPGV----------MIAEEPQWRDCIQG  116 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~----------d~~~~~~~~~~~~~  116 (363)
                      ++|+|.|+| .|++|..++..|.+.  |++|++++|++.+.+.+..........++          .+.-..++.+.+++
T Consensus         8 ~~mkI~VIG-~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~t~~~~~~~~~   86 (481)
T 2o3j_A            8 KVSKVVCVG-AGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSSDIPKAIAE   86 (481)
T ss_dssp             CCCEEEEEC-CSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHH
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHhhc
Confidence            357999999 699999999999998  79999999998776665432110000110          11112234456778


Q ss_pred             CCEEEEccCCC
Q 017977          117 STAVVNLAGTP  127 (363)
Q Consensus       117 ~d~Vi~~a~~~  127 (363)
                      +|+||-+...+
T Consensus        87 aDvvii~Vptp   97 (481)
T 2o3j_A           87 ADLIFISVNTP   97 (481)
T ss_dssp             CSEEEECCCCC
T ss_pred             CCEEEEecCCc
Confidence            99999887654

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=97.17  E-value=0.00013  Score=63.47  Aligned_cols=74  Identities=20%  Similarity=0.251  Sum_probs=50.9

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCc----cccCcccccCcchHHhhccCCCEEEEcc
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKT----RFFPGVMIAEEPQWRDCIQGSTAVVNLA  124 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~----~~~~~~d~~~~~~~~~~~~~~d~Vi~~a  124 (363)
                      ..++++|+|+ |.+|++++..|++.| +|++++|+.++.+.+......    .....+|+.+   +.+.+.++|+||+++
T Consensus       127 ~~k~vlV~Ga-GgiG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~---~~~~~~~~DilVn~a  201 (287)
T 1nvt_A          127 KDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSG---LDVDLDGVDIIINAT  201 (287)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEEC---TTCCCTTCCEEEECS
T ss_pred             CCCEEEEECc-hHHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEee---HHHhhCCCCEEEECC
Confidence            4578999998 599999999999999 999999987654433211000    0001234433   245567899999999


Q ss_pred             CCC
Q 017977          125 GTP  127 (363)
Q Consensus       125 ~~~  127 (363)
                      +..
T Consensus       202 g~~  204 (287)
T 1nvt_A          202 PIG  204 (287)
T ss_dssp             CTT
T ss_pred             CCC
Confidence            864

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=97.16  E-value=0.00047  Score=59.46  Aligned_cols=71  Identities=18%  Similarity=0.223  Sum_probs=53.7

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCCC
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  127 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~~  127 (363)
                      ...++|+|+|+ |.+|+.++..|.+.|++|++++|+.++.+.+....      +++..+  ++.+.++++|+||++....
T Consensus       127 ~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~------g~~~~~--~~~~~~~~aDiVi~atp~~  197 (275)
T 2hk9_A          127 VKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKF------PLEVVN--SPEEVIDKVQVIVNTTSVG  197 (275)
T ss_dssp             GGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTS------CEEECS--CGGGTGGGCSEEEECSSTT
T ss_pred             cCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHc------CCeeeh--hHHhhhcCCCEEEEeCCCC
Confidence            34579999995 99999999999999999999999887655544321      123322  4566778899999998753

>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*

Probab=97.16  E-value=0.0025  Score=57.05  Aligned_cols=71  Identities=14%  Similarity=0.172  Sum_probs=40.7

Q ss_pred             ccEEEEecCcchHHHHHHHH-HHhCCC---EEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           50 QMTVSVTGATGFIGRRLVQR-LQADNH---QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~-L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      ||||.|.||+|++|+.|++. |.++++   .++.+..+. .........    .....+.+.++... ++++|+||.+.+
T Consensus         1 m~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~s-~G~~v~~~~----g~~i~~~~~~~~~~-~~~~DvVf~a~g   74 (367)
T 1t4b_A            1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQ-LGQAAPSFG----GTTGTLQDAFDLEA-LKALDIIVTCQG   74 (367)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSS-TTSBCCGGG----TCCCBCEETTCHHH-HHTCSEEEECSC
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeCC-CCCCccccC----CCceEEEecCChHH-hcCCCEEEECCC
Confidence            47999999999999999995 545543   566665542 221111000    00112222211222 468999998886


Q ss_pred             C
Q 017977          126 T  126 (363)
Q Consensus       126 ~  126 (363)
                      .
T Consensus        75 ~   75 (367)
T 1t4b_A           75 G   75 (367)
T ss_dssp             H
T ss_pred             c
Confidence            3

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=97.15  E-value=0.00045  Score=58.60  Aligned_cols=68  Identities=19%  Similarity=0.213  Sum_probs=53.2

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCC-EEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      .. +|+|+|+ |..|++++..|.+.|. +|++++|+.++.+.+....        .....+++.+.+.++|+||++...
T Consensus       108 ~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~--------~~~~~~~~~~~~~~aDiVInatp~  176 (253)
T 3u62_A          108 KE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPV--------KIFSLDQLDEVVKKAKSLFNTTSV  176 (253)
T ss_dssp             CS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSC--------EEEEGGGHHHHHHTCSEEEECSST
T ss_pred             CC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHc--------ccCCHHHHHhhhcCCCEEEECCCC
Confidence            34 8999996 9999999999999998 9999999987776655431        112334566778899999998754

>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A

Probab=97.15  E-value=0.0035  Score=55.97  Aligned_cols=70  Identities=19%  Similarity=0.234  Sum_probs=41.3

Q ss_pred             cEEEEecCcchHHHHHHH-HHHhCCC---EEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           51 MTVSVTGATGFIGRRLVQ-RLQADNH---QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~-~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      |+|.|.||||++|+.|++ .|.++.+   ++..++-+. ..........    ....+.+..+. +.++++|+||.|++.
T Consensus         1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~-aG~~~~~~~~----~~~~~~~~~~~-~~~~~~Dvvf~a~~~   74 (370)
T 3pzr_A            1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQ-IGVPAPNFGK----DAGMLHDAFDI-ESLKQLDAVITCQGG   74 (370)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSS-TTSBCCCSSS----CCCBCEETTCH-HHHTTCSEEEECSCH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEeccc-cCcCHHHhCC----CceEEEecCCh-hHhccCCEEEECCCh
Confidence            589999999999999999 6666663   666554332 2222111100    01122222222 235789999988864

>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A

Probab=97.13  E-value=0.00021  Score=61.01  Aligned_cols=68  Identities=15%  Similarity=0.212  Sum_probs=49.6

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      +||+|.|+| +|.+|+.+++.|.+.|++|.+++|+++..+.+....      +  +....++.++++++|+||-+..
T Consensus         2 ~~m~i~iiG-~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~------g--~~~~~~~~~~~~~~D~Vi~~v~   69 (259)
T 2ahr_A            2 NAMKIGIIG-VGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL------A--LPYAMSHQDLIDQVDLVILGIK   69 (259)
T ss_dssp             -CCEEEEEC-CSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH------T--CCBCSSHHHHHHTCSEEEECSC
T ss_pred             CccEEEEEC-CCHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHc------C--CEeeCCHHHHHhcCCEEEEEeC
Confidence            357999999 699999999999999999999999876654432110      1  1112345666778999998764

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=97.12  E-value=0.00029  Score=64.29  Aligned_cols=72  Identities=25%  Similarity=0.270  Sum_probs=53.7

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCC-EEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCCC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  127 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~~  127 (363)
                      .+++|+|+|+ |.+|+.+++.|...|. +|++++|+..+...+...      .+.+..+.+++.+.+.++|+||.+.+.+
T Consensus       166 ~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~------~g~~~~~~~~l~~~l~~aDvVi~at~~~  238 (404)
T 1gpj_A          166 HDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARD------LGGEAVRFDELVDHLARSDVVVSATAAP  238 (404)
T ss_dssp             TTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHH------HTCEECCGGGHHHHHHTCSEEEECCSSS
T ss_pred             cCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH------cCCceecHHhHHHHhcCCCEEEEccCCC
Confidence            4579999997 9999999999999998 999999987654322111      1123334456777788999999998653

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=97.12  E-value=0.00057  Score=59.74  Aligned_cols=72  Identities=18%  Similarity=0.215  Sum_probs=54.0

Q ss_pred             CCCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           47 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        47 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      ....++|+|+|+ |.+|+.+++.|...|.+|++++|+..+.......       +.+..+.+++.+.++++|+|+.+...
T Consensus       154 ~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~-------g~~~~~~~~l~~~l~~aDvVi~~~p~  225 (300)
T 2rir_A          154 TIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLARITEM-------GLVPFHTDELKEHVKDIDICINTIPS  225 (300)
T ss_dssp             CSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT-------TCEEEEGGGHHHHSTTCSEEEECCSS
T ss_pred             CCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHC-------CCeEEchhhHHHHhhCCCEEEECCCh
Confidence            345679999995 9999999999999999999999987554322111       12232345678888999999988764

>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}

Probab=97.12  E-value=0.00059  Score=59.77  Aligned_cols=101  Identities=15%  Similarity=0.201  Sum_probs=67.7

Q ss_pred             EEEEecCcchHHHHHHHHHHhCCC-EEEEEeCCCCcccccCCCCCcc---ccCcccccCcchHHhhccCCCEEEEccCCC
Q 017977           52 TVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTR---FFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  127 (363)
Q Consensus        52 ~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~~  127 (363)
                      ||.|+|| |.+|..++..|+..|. +|..++++..+.+.........   ......+....++ +.++++|+||..++.+
T Consensus         1 KI~IiGa-G~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~aD~Vi~~ag~~   78 (308)
T 2d4a_B            1 MITILGA-GKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGSNSY-EDMRGSDIVLVTAGIG   78 (308)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCSCC
T ss_pred             CEEEECc-CHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEECCCH-HHhCCCCEEEEeCCCC
Confidence            5899998 9999999999988787 7999999875543211000000   0001122221234 5789999999999875


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHHHHHHHh
Q 017977          128 IGTRWSSEIKKEIKESRIRVTSKVVDLINE  157 (363)
Q Consensus       128 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  157 (363)
                      .....   ...+....|+...+.+++.+.+
T Consensus        79 ~k~G~---~r~dl~~~n~~i~~~i~~~i~~  105 (308)
T 2d4a_B           79 RKPGM---TREQLLEANANTMADLAEKIKA  105 (308)
T ss_dssp             CCSSC---CTHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCC---cHHHHHHHHHHHHHHHHHHHHH
Confidence            43222   2456778899999999999988

>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}

Probab=97.11  E-value=0.00091  Score=58.27  Aligned_cols=65  Identities=20%  Similarity=0.189  Sum_probs=46.0

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      +||.++| .|.+|..+++.|++.||+|++.+|++++.+.+...+         ..-.++..++++++|+||-+..
T Consensus         6 ~kIgfIG-LG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~G---------~~~~~s~~e~~~~~dvvi~~l~   70 (297)
T 4gbj_A            6 EKIAFLG-LGNLGTPIAEILLEAGYELVVWNRTASKAEPLTKLG---------ATVVENAIDAITPGGIVFSVLA   70 (297)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEC-------CTTTTTT---------CEECSSGGGGCCTTCEEEECCS
T ss_pred             CcEEEEe-cHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcC---------CeEeCCHHHHHhcCCceeeecc
Confidence            4899999 799999999999999999999999998877665432         1123456677888999997764

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=97.10  E-value=0.00048  Score=59.79  Aligned_cols=65  Identities=15%  Similarity=0.210  Sum_probs=50.9

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      |+|.|+| .|.+|..++..|.+.|++|++.+|++.+.+.+...         .+.-.+++.++++++|+||-+..
T Consensus         2 ~~i~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~---------g~~~~~~~~~~~~~aDvvi~~vp   66 (287)
T 3pef_A            2 QKFGFIG-LGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAAL---------GAERAATPCEVVESCPVTFAMLA   66 (287)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHT---------TCEECSSHHHHHHHCSEEEECCS
T ss_pred             CEEEEEe-ecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHC---------CCeecCCHHHHHhcCCEEEEEcC
Confidence            6899999 59999999999999999999999998776654322         11223456677788999997764

>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}

Probab=97.10  E-value=0.00069  Score=60.63  Aligned_cols=76  Identities=16%  Similarity=0.295  Sum_probs=51.3

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCc-cccCccc----ccCcchHHhhccCCCEEEE
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKT-RFFPGVM----IAEEPQWRDCIQGSTAVVN  122 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~d----~~~~~~~~~~~~~~d~Vi~  122 (363)
                      ..+|+|.|+|+ |.+|..++..|.+.|++|++.+|++...+.+...... ....+..    +.-..++.++++++|+||-
T Consensus        27 ~~~mkI~VIGa-G~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~~~aDvVil  105 (356)
T 3k96_A           27 PFKHPIAILGA-GSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEGVTDILI  105 (356)
T ss_dssp             CCCSCEEEECC-SHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHHHHTTCCEEEE
T ss_pred             ccCCeEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEECCHHHHHhcCCEEEE
Confidence            34579999995 9999999999999999999999987654433221100 0011111    1122456677889999996


Q ss_pred             cc
Q 017977          123 LA  124 (363)
Q Consensus       123 ~a  124 (363)
                      +.
T Consensus       106 aV  107 (356)
T 3k96_A          106 VV  107 (356)
T ss_dssp             CC
T ss_pred             CC
Confidence            65

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=97.09  E-value=0.00028  Score=61.92  Aligned_cols=68  Identities=22%  Similarity=0.241  Sum_probs=52.0

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      ..+|+|.|+| .|.+|..+++.|++.|++|++.+|++.+.+.+...         .....+++.++++++|+||-+..
T Consensus         7 ~~~~~IgiIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~---------g~~~~~~~~e~~~~aDvVi~~vp   74 (306)
T 3l6d_A            7 SFEFDVSVIG-LGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVAA---------GAHLCESVKAALSASPATIFVLL   74 (306)
T ss_dssp             CCSCSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH---------TCEECSSHHHHHHHSSEEEECCS
T ss_pred             cCCCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHC---------CCeecCCHHHHHhcCCEEEEEeC
Confidence            3457899998 69999999999999999999999998765544321         11223456677788999997765

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=97.08  E-value=0.00024  Score=61.70  Aligned_cols=66  Identities=15%  Similarity=0.231  Sum_probs=50.9

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      ||+|.|+| .|.+|..+++.|.+.||+|++.+|++.+.+.+...       +  +.-.++..++++++|+||-+..
T Consensus         1 M~~I~iiG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~-------g--~~~~~~~~~~~~~advvi~~v~   66 (287)
T 3pdu_A            1 MTTYGFLG-LGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVAL-------G--ARQASSPAEVCAACDITIAMLA   66 (287)
T ss_dssp             CCCEEEEC-CSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHHH-------T--CEECSCHHHHHHHCSEEEECCS
T ss_pred             CCeEEEEc-cCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHC-------C--CeecCCHHHHHHcCCEEEEEcC
Confidence            46899998 79999999999999999999999998776554321       1  1123356667778899997764

>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}

Probab=97.07  E-value=0.00039  Score=58.87  Aligned_cols=78  Identities=24%  Similarity=0.266  Sum_probs=48.7

Q ss_pred             CCCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCc--ccccCCCCC---cccc-CcccccCcchHHhhccCCCEE
Q 017977           47 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK--AELIFPGKK---TRFF-PGVMIAEEPQWRDCIQGSTAV  120 (363)
Q Consensus        47 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~--~~~~~~~~~---~~~~-~~~d~~~~~~~~~~~~~~d~V  120 (363)
                      ...+|+|.|+| +|.+|.++++.|++.|++|++.+|+++.  .........   .... .........+..++++++|+|
T Consensus        16 ~~~~~kIgiIG-~G~mG~alA~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aDvV   94 (245)
T 3dtt_A           16 YFQGMKIAVLG-TGTVGRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVHLAAFADVAAGAELV   94 (245)
T ss_dssp             ---CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHTCC-------CCHHHHGGGSTTCEEEEHHHHHHHCSEE
T ss_pred             ccCCCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCceeccCHHHHHhcCCEE
Confidence            34457999998 7999999999999999999999998765  111000000   0000 000011234566777889999


Q ss_pred             EEccC
Q 017977          121 VNLAG  125 (363)
Q Consensus       121 i~~a~  125 (363)
                      |-+..
T Consensus        95 ilavp   99 (245)
T 3dtt_A           95 VNATE   99 (245)
T ss_dssp             EECSC
T ss_pred             EEccC
Confidence            97764

>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A

Probab=97.06  E-value=0.00046  Score=64.26  Aligned_cols=78  Identities=17%  Similarity=0.227  Sum_probs=52.9

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhC--CCEEEEEeCCCCcccccCCCCCccccCcc----------cccCcchHHhhccC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQAD--NHQVRVLTRSRSKAELIFPGKKTRFFPGV----------MIAEEPQWRDCIQG  116 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~----------d~~~~~~~~~~~~~  116 (363)
                      +||+|.|+| +|++|..++..|++.  |++|++++|++.+.+.+..........++          .+.-..++.+++++
T Consensus         4 ~~mkI~VIG-~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~t~~~~e~~~~   82 (467)
T 2q3e_A            4 EIKKICCIG-AGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIKE   82 (467)
T ss_dssp             CCCEEEEEC-CSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHH
T ss_pred             CccEEEEEC-CCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHHhc
Confidence            457999999 699999999999998  89999999988766554332110000000          11112345566778


Q ss_pred             CCEEEEccCCC
Q 017977          117 STAVVNLAGTP  127 (363)
Q Consensus       117 ~d~Vi~~a~~~  127 (363)
                      +|+||-+...+
T Consensus        83 aDvViiaVptp   93 (467)
T 2q3e_A           83 ADLVFISVNTP   93 (467)
T ss_dssp             CSEEEECCCCC
T ss_pred             CCEEEEEcCCc
Confidence            99999887643

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.06  E-value=0.00044  Score=59.33  Aligned_cols=73  Identities=18%  Similarity=0.114  Sum_probs=50.7

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCC-EEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      ...++++|+|+ |.+|+.++..|.+.|. +|++++|+.++.+.+......   ..+.....+++..  .++|+||++...
T Consensus       118 l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~---~~~~~~~~~~l~~--~~~DivInaTp~  191 (272)
T 3pwz_A          118 LRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDH---SRLRISRYEALEG--QSFDIVVNATSA  191 (272)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCC---TTEEEECSGGGTT--CCCSEEEECSSG
T ss_pred             ccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcc---CCeeEeeHHHhcc--cCCCEEEECCCC
Confidence            34579999996 8999999999999995 999999998765544322110   0122333333332  678999998764

>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}

Probab=97.06  E-value=0.00075  Score=59.31  Aligned_cols=70  Identities=10%  Similarity=0.119  Sum_probs=48.5

Q ss_pred             CCCccEEEEecCcchHHHHHHHHHHhCCC-EEEEEeCCC--CcccccCCCCCccccCcccccCcchHHhhccCCCEEEEc
Q 017977           47 KASQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSR--SKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNL  123 (363)
Q Consensus        47 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~--~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~  123 (363)
                      ...+|+|.|+| .|.+|..+++.|.+.|+ +|++.+|++  ...+.....       +  +.-.++..++++++|+||-+
T Consensus        21 ~~~~~~I~iIG-~G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~~-------g--~~~~~~~~e~~~~aDvVi~~   90 (312)
T 3qsg_A           21 QSNAMKLGFIG-FGEAASAIASGLRQAGAIDMAAYDAASAESWRPRAEEL-------G--VSCKASVAEVAGECDVIFSL   90 (312)
T ss_dssp             ----CEEEEEC-CSHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHHT-------T--CEECSCHHHHHHHCSEEEEC
T ss_pred             cCCCCEEEEEC-ccHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHHC-------C--CEEeCCHHHHHhcCCEEEEe
Confidence            34568999999 59999999999999999 999999974  333322211       1  11233556677889999977


Q ss_pred             cCC
Q 017977          124 AGT  126 (363)
Q Consensus       124 a~~  126 (363)
                      ...
T Consensus        91 vp~   93 (312)
T 3qsg_A           91 VTA   93 (312)
T ss_dssp             SCT
T ss_pred             cCc
Confidence            654

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=97.04  E-value=0.00074  Score=58.79  Aligned_cols=72  Identities=17%  Similarity=0.157  Sum_probs=53.8

Q ss_pred             CCCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           47 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        47 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      ...+++|+|+| .|.+|+.+++.|...|.+|++++|+..+.......       +++..+.+++.+.++++|+|+.+...
T Consensus       152 ~l~g~~v~IiG-~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~-------g~~~~~~~~l~~~l~~aDvVi~~~p~  223 (293)
T 3d4o_A          152 TIHGANVAVLG-LGRVGMSVARKFAALGAKVKVGARESDLLARIAEM-------GMEPFHISKAAQELRDVDVCINTIPA  223 (293)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT-------TSEEEEGGGHHHHTTTCSEEEECCSS
T ss_pred             CCCCCEEEEEe-eCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHC-------CCeecChhhHHHHhcCCCEEEECCCh
Confidence            34567999999 59999999999999999999999987553322111       12333345677888999999988753

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=97.04  E-value=0.00067  Score=58.35  Aligned_cols=68  Identities=18%  Similarity=0.242  Sum_probs=51.5

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCC-EEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      ...++++|+|+ |..|+.++..|.+.|. +|++++|+.++.+.+....        ...+.+++.+ + ++|+||++...
T Consensus       120 ~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~~--------~~~~~~~l~~-l-~~DivInaTp~  188 (282)
T 3fbt_A          120 IKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGEF--------KVISYDELSN-L-KGDVIINCTPK  188 (282)
T ss_dssp             CTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTTS--------EEEEHHHHTT-C-CCSEEEECSST
T ss_pred             ccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhc--------CcccHHHHHh-c-cCCEEEECCcc
Confidence            34579999996 8999999999999998 9999999988776665431        1222334444 4 89999998865

>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}

Probab=97.03  E-value=0.0012  Score=59.19  Aligned_cols=32  Identities=31%  Similarity=0.493  Sum_probs=26.7

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCC-CEEEEE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADN-HQVRVL   80 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~   80 (363)
                      +++||.|.||||++|..|++.|.++. .++..+
T Consensus        18 ~~~kVaIvGAtG~vG~ell~lL~~hp~~el~~l   50 (381)
T 3hsk_A           18 SVKKAGVLGATGSVGQRFILLLSKHPEFEIHAL   50 (381)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEE
T ss_pred             CccEEEEECCCChHHHHHHHHHHcCCCceEEEe
Confidence            44689999999999999999888876 467555

>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}

Probab=97.03  E-value=0.00077  Score=58.68  Aligned_cols=67  Identities=16%  Similarity=0.219  Sum_probs=48.1

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      +||+|.|+| +|.+|+.++..|.+.|++|++++ ++...+.+....         +...+++.++++++|+||-+...
T Consensus         2 ~~m~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~-~~~~~~~~~~~g---------~~~~~~~~~~~~~~D~vi~~vp~   68 (295)
T 1yb4_A            2 NAMKLGFIG-LGIMGSPMAINLARAGHQLHVTT-IGPVADELLSLG---------AVNVETARQVTEFADIIFIMVPD   68 (295)
T ss_dssp             --CEEEECC-CSTTHHHHHHHHHHTTCEEEECC-SSCCCHHHHTTT---------CBCCSSHHHHHHTCSEEEECCSS
T ss_pred             CCCEEEEEc-cCHHHHHHHHHHHhCCCEEEEEc-CHHHHHHHHHcC---------CcccCCHHHHHhcCCEEEEECCC
Confidence            457999999 69999999999999999999888 665554433221         11223456667789999977643

>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}

Probab=97.02  E-value=0.0004  Score=60.71  Aligned_cols=67  Identities=9%  Similarity=0.137  Sum_probs=49.4

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      .+|+|.|+| .|.+|+.++..|.+.|++|++++|++...+.+....       +..  .+++.++++++|+||-+..
T Consensus         3 ~~~~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g-------~~~--~~~~~~~~~~~D~vi~~vp   69 (301)
T 3cky_A            3 KSIKIGFIG-LGAMGKPMAINLLKEGVTVYAFDLMEANVAAVVAQG-------AQA--CENNQKVAAASDIIFTSLP   69 (301)
T ss_dssp             -CCEEEEEC-CCTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHTTT-------CEE--CSSHHHHHHHCSEEEECCS
T ss_pred             CCCEEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCC-------Cee--cCCHHHHHhCCCEEEEECC
Confidence            347999999 699999999999999999999999876655443221       111  2345566677899997764

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=97.02  E-value=0.00022  Score=62.33  Aligned_cols=79  Identities=11%  Similarity=0.131  Sum_probs=50.8

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCC-EEEEEeCC---CCcccccCCCCCccc---cCcccccCcchHHhhccCCCEE
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRS---RSKAELIFPGKKTRF---FPGVMIAEEPQWRDCIQGSTAV  120 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~---~~~~~~~~~~~~~~~---~~~~d~~~~~~~~~~~~~~d~V  120 (363)
                      ...++++|+|+ |..|+.++..|.+.|. +|+++.|+   .++.+.+........   ....++.+.+.+.+.+.++|+|
T Consensus       146 l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~DiI  224 (312)
T 3t4e_A          146 MRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASADIL  224 (312)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHCSEE
T ss_pred             cCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccCceEE
Confidence            34579999996 9999999999999997 89999999   433333221100000   0011222222235667789999


Q ss_pred             EEccCCC
Q 017977          121 VNLAGTP  127 (363)
Q Consensus       121 i~~a~~~  127 (363)
                      |++....
T Consensus       225 INaTp~G  231 (312)
T 3t4e_A          225 TNGTKVG  231 (312)
T ss_dssp             EECSSTT
T ss_pred             EECCcCC
Confidence            9988653

>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*

Probab=97.01  E-value=0.00075  Score=58.52  Aligned_cols=65  Identities=17%  Similarity=0.042  Sum_probs=47.0

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      ||+|.|+| .|.+|+.++..|.+ |++|++++|++...+.+...       ++...+   ..++++++|+||.+...
T Consensus         1 M~~i~iiG-~G~~G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~~-------g~~~~~---~~~~~~~~D~vi~~v~~   65 (289)
T 2cvz_A            1 MEKVAFIG-LGAMGYPMAGHLAR-RFPTLVWNRTFEKALRHQEE-------FGSEAV---PLERVAEARVIFTCLPT   65 (289)
T ss_dssp             -CCEEEEC-CSTTHHHHHHHHHT-TSCEEEECSSTHHHHHHHHH-------HCCEEC---CGGGGGGCSEEEECCSS
T ss_pred             CCeEEEEc-ccHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHC-------CCcccC---HHHHHhCCCEEEEeCCC
Confidence            46899999 59999999999999 99999999988665443221       111112   44556789999987653

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=97.01  E-value=0.00046  Score=61.72  Aligned_cols=73  Identities=7%  Similarity=0.032  Sum_probs=51.2

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcch---HHhhc--cCCCEEEEccC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQ---WRDCI--QGSTAVVNLAG  125 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~---~~~~~--~~~d~Vi~~a~  125 (363)
                      .+|+|+||+|.+|...++.+...|.+|+++++++.+.+.....+.   ...+|..+.+.   +.+..  .++|+||+++|
T Consensus       166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~Ga---~~~~~~~~~~~~~~v~~~~~~~g~D~vid~~g  242 (349)
T 3pi7_A          166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIGA---AHVLNEKAPDFEATLREVMKAEQPRIFLDAVT  242 (349)
T ss_dssp             SEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHTC---SEEEETTSTTHHHHHHHHHHHHCCCEEEESSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCC---CEEEECCcHHHHHHHHHHhcCCCCcEEEECCC
Confidence            589999999999999999999999999999998877554432211   11234333332   22222  27999999998


Q ss_pred             C
Q 017977          126 T  126 (363)
Q Consensus       126 ~  126 (363)
                      .
T Consensus       243 ~  243 (349)
T 3pi7_A          243 G  243 (349)
T ss_dssp             H
T ss_pred             C
Confidence            4

>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6

Probab=96.99  E-value=0.00038  Score=62.49  Aligned_cols=75  Identities=12%  Similarity=0.060  Sum_probs=49.9

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCc------ccc-cCcchHHhhccCCCEEEE
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPG------VMI-AEEPQWRDCIQGSTAVVN  122 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~------~d~-~~~~~~~~~~~~~d~Vi~  122 (363)
                      +|+|+|+|+ |.+|..++..|.+.|++|++++|++...+.+....... ...      ..+ ...+++.++++++|+||-
T Consensus         4 ~mki~iiG~-G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~   81 (359)
T 1bg6_A            4 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAII-AEGPGLAGTAHPDLLTSDIGLAVKDADVILI   81 (359)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEE-EESSSCCEEECCSEEESCHHHHHTTCSEEEE
T ss_pred             cCeEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCeE-EeccccccccccceecCCHHHHHhcCCEEEE
Confidence            479999995 99999999999999999999999876544332110000 000      011 012345566778999997


Q ss_pred             ccCC
Q 017977          123 LAGT  126 (363)
Q Consensus       123 ~a~~  126 (363)
                      +...
T Consensus        82 ~v~~   85 (359)
T 1bg6_A           82 VVPA   85 (359)
T ss_dssp             CSCG
T ss_pred             eCCc
Confidence            7653

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=96.99  E-value=0.00066  Score=59.68  Aligned_cols=69  Identities=12%  Similarity=0.072  Sum_probs=49.9

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCC--EEEEEeCCCCcccccCCCCCccccCcccccCcchHHh-hccCCCEEEEccC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRD-CIQGSTAVVNLAG  125 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~~~~d~Vi~~a~  125 (363)
                      ++|+|.|+| .|.+|..+++.|.+.|+  +|++++|++...+.....+    .  .+- -.+++.+ +++++|+||-+..
T Consensus        32 ~~~kI~IIG-~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G----~--~~~-~~~~~~~~~~~~aDvVilavp  103 (314)
T 3ggo_A           32 SMQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLG----I--IDE-GTTSIAKVEDFSPDFVMLSSP  103 (314)
T ss_dssp             SCSEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTT----S--CSE-EESCTTGGGGGCCSEEEECSC
T ss_pred             CCCEEEEEe-eCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCC----C--cch-hcCCHHHHhhccCCEEEEeCC
Confidence            447999999 79999999999999999  9999999886654432211    0  110 0123445 6788999997764

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=96.98  E-value=0.0005  Score=61.24  Aligned_cols=74  Identities=23%  Similarity=0.083  Sum_probs=51.1

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcc---hHHhhccCCCEEEEccC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEP---QWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~~~~~d~Vi~~a~  125 (363)
                      .+++|||+|| |.+|..+++.+...|.+|++++|++.+.+.......   ...+|..+.+   .+.+...++|+||++++
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa---~~~~d~~~~~~~~~~~~~~~~~d~vid~~g  239 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGA---DLVVNPLKEDAAKFMKEKVGGVHAAVVTAV  239 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTC---SEEECTTTSCHHHHHHHHHSSEEEEEESSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCC---CEEecCCCccHHHHHHHHhCCCCEEEECCC
Confidence            3469999999 779999999999999999999998766554332211   1113444332   22222257999999998


Q ss_pred             C
Q 017977          126 T  126 (363)
Q Consensus       126 ~  126 (363)
                      .
T Consensus       240 ~  240 (339)
T 1rjw_A          240 S  240 (339)
T ss_dssp             C
T ss_pred             C
Confidence            5

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=96.98  E-value=0.00021  Score=67.50  Aligned_cols=72  Identities=17%  Similarity=0.169  Sum_probs=46.0

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHh-hccCCCEEEEccCCC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRD-CIQGSTAVVNLAGTP  127 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~~~~d~Vi~~a~~~  127 (363)
                      ..++++|||| |.+|++++..|++.|++|++++|+.++.+.+.....   ....++.   ++.+ ....+|+|||+++..
T Consensus       363 ~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~~---~~~~~~~---dl~~~~~~~~DilVN~agvg  435 (523)
T 2o7s_A          363 ASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAIG---GKALSLT---DLDNYHPEDGMVLANTTSMG  435 (523)
T ss_dssp             ---CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHTT---C-CEETT---TTTTC--CCSEEEEECSSTT
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC---CceeeHH---HhhhccccCceEEEECCCCC
Confidence            3468999998 799999999999999999999998766544322110   0001221   2222 124589999999863

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=96.97  E-value=0.00038  Score=60.77  Aligned_cols=65  Identities=14%  Similarity=0.260  Sum_probs=49.0

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      |+|.|+| .|.+|..++..|.+.|++|++++|++...+.+...       ++.  ...++.++++++|+||.+..
T Consensus         6 m~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~-------g~~--~~~~~~~~~~~~D~vi~~v~   70 (299)
T 1vpd_A            6 MKVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAA-------GAE--TASTAKAIAEQCDVIITMLP   70 (299)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT-------TCE--ECSSHHHHHHHCSEEEECCS
T ss_pred             ceEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHC-------CCe--ecCCHHHHHhCCCEEEEECC
Confidence            6999999 69999999999999999999999987665443221       111  12345566778999998775

>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*

Probab=96.96  E-value=0.0036  Score=54.13  Aligned_cols=73  Identities=15%  Similarity=0.140  Sum_probs=48.2

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      |+|.|+|+ |.+|..++..|.+.|++|++++|++...+.+.............+.. +. .+.++++|+||-+...
T Consensus         1 m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~-~~-~~~~~~~d~vi~~v~~   73 (291)
T 1ks9_A            1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTA-ND-PDFLATSDLLLVTLKA   73 (291)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEE-SC-HHHHHTCSEEEECSCG
T ss_pred             CeEEEECc-CHHHHHHHHHHHhCCCCEEEEEcCccceeeEEEEcCCCceeeeeeee-cC-ccccCCCCEEEEEecH
Confidence            58999996 99999999999999999999999887655432211000000011111 11 2456789999977653

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=96.96  E-value=0.0014  Score=59.24  Aligned_cols=69  Identities=19%  Similarity=0.152  Sum_probs=51.8

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVN  122 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~  122 (363)
                      ++++|+|+|+ |.+|+.+++.+.+.|++|++++.++.........    .....++.|.+.+.++++.+|+|..
T Consensus        11 ~~~~IlIlG~-G~lg~~la~aa~~lG~~viv~d~~~~~p~~~~ad----~~~~~~~~d~~~l~~~~~~~dvi~~   79 (377)
T 3orq_A           11 FGATIGIIGG-GQLGKMMAQSAQKMGYKVVVLDPSEDCPCRYVAH----EFIQAKYDDEKALNQLGQKCDVITY   79 (377)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCTTGGGSS----EEEECCTTCHHHHHHHHHHCSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCChhhhhCC----EEEECCCCCHHHHHHHHHhCCccee
Confidence            4579999995 9999999999999999999998866432211111    0333577788888888888998864

>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A

Probab=96.96  E-value=0.0016  Score=60.51  Aligned_cols=72  Identities=14%  Similarity=0.279  Sum_probs=50.1

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccc---cCcchHHhhccCCCEEEEccC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMI---AEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~---~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      .+|+|.|+| .|.+|..++..|.+.||+|++.+|++++.+.+.....    .+..+   .+.+++.+.++++|+||-+..
T Consensus         3 ~~~kIgiIG-lG~MG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~g~----~g~~i~~~~s~~e~v~~l~~aDvVil~Vp   77 (484)
T 4gwg_A            3 AQADIALIG-LAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEA----KGTKVVGAQSLKEMVSKLKKPRRIILLVK   77 (484)
T ss_dssp             CCBSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTT----TTSSCEECSSHHHHHHTBCSSCEEEECSC
T ss_pred             CCCEEEEEC-hhHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhccc----CCCceeccCCHHHHHhhccCCCEEEEecC
Confidence            457999999 6999999999999999999999999987665433210    01122   233333333446888887664

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.95  E-value=0.00084  Score=57.25  Aligned_cols=66  Identities=21%  Similarity=0.198  Sum_probs=49.5

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  127 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~~  127 (363)
                      .++|+|+|+ |..|+.++..|.+.|.+|++++|+.++.+.+. ...      +.....+++    .++|+||++....
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~~------~~~~~~~~l----~~~DiVInaTp~G  183 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RLG------CDCFMEPPK----SAFDLIINATSAS  183 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HHT------CEEESSCCS----SCCSEEEECCTTC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCC------CeEecHHHh----ccCCEEEEcccCC
Confidence            579999996 99999999999999999999999998876554 211      122222222    2789999987653

>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}

Probab=96.95  E-value=0.00067  Score=59.77  Aligned_cols=67  Identities=18%  Similarity=0.322  Sum_probs=49.4

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      .+|+|.|+| .|.+|+.++..|.+.|++|.+++|++...+.+...       ++..  ..+..+.++++|+||-+..
T Consensus        29 ~~~~I~iIG-~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~-------g~~~--~~~~~~~~~~~DvVi~av~   95 (316)
T 2uyy_A           29 TDKKIGFLG-LGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQE-------GARL--GRTPAEVVSTCDITFACVS   95 (316)
T ss_dssp             CSSCEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSGGGGHHHHHT-------TCEE--CSCHHHHHHHCSEEEECCS
T ss_pred             CCCeEEEEc-ccHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHc-------CCEE--cCCHHHHHhcCCEEEEeCC
Confidence            347899999 59999999999999999999999988765543321       1111  2235556678899997764

>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*

Probab=96.94  E-value=0.0006  Score=59.45  Aligned_cols=67  Identities=16%  Similarity=0.288  Sum_probs=52.8

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      +|+||-++| .|.+|..+++.|++.||+|++.+|++++.+.+....         ..-.++..++++++|+||-|..
T Consensus         2 ~M~kIgfIG-lG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~G---------a~~a~s~~e~~~~~dvv~~~l~   68 (300)
T 3obb_A            2 HMKQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAG---------ASAARSARDAVQGADVVISMLP   68 (300)
T ss_dssp             -CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTT---------CEECSSHHHHHTTCSEEEECCS
T ss_pred             CcCEEEEee-ehHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHcC---------CEEcCCHHHHHhcCCceeecCC
Confidence            467999999 799999999999999999999999988776654321         1233456777888899887765

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=96.94  E-value=0.0012  Score=59.60  Aligned_cols=74  Identities=15%  Similarity=0.100  Sum_probs=49.2

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhc--cCCCEEEEccCC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI--QGSTAVVNLAGT  126 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~--~~~d~Vi~~a~~  126 (363)
                      .+.+|+|+||+|.+|...++.+...|.+|+++++ +.+.+.....+.   ...+|..+.+..+.+.  .++|+||+++|.
T Consensus       183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~~~~~~~~lGa---~~v~~~~~~~~~~~~~~~~g~D~vid~~g~  258 (375)
T 2vn8_A          183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-QDASELVRKLGA---DDVIDYKSGSVEEQLKSLKPFDFILDNVGG  258 (375)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-GGGHHHHHHTTC---SEEEETTSSCHHHHHHTSCCBSEEEESSCT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-hHHHHHHHHcCC---CEEEECCchHHHHHHhhcCCCCEEEECCCC
Confidence            4569999999999999999999999999999884 444333222111   1113443333222222  479999999985

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=96.93  E-value=0.00069  Score=60.85  Aligned_cols=74  Identities=20%  Similarity=0.079  Sum_probs=52.3

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCc-chHHhhccCCCEEEEccCC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEE-PQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~d~Vi~~a~~  126 (363)
                      ...+|||+|+ |.+|...++.+...|.+|+++++++.+.+.....+.   ...+|..+. +..+....++|+||.+++.
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa---~~v~~~~~~~~~~~~~~~~~D~vid~~g~  253 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGA---DHYIATLEEGDWGEKYFDTFDLIVVCASS  253 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTC---SEEEEGGGTSCHHHHSCSCEEEEEECCSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCC---CEEEcCcCchHHHHHhhcCCCEEEECCCC
Confidence            3468999999 999999999999899999999998877554432111   111344343 3333333579999999985

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=96.88  E-value=0.0018  Score=56.43  Aligned_cols=81  Identities=15%  Similarity=0.066  Sum_probs=56.6

Q ss_pred             CCCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccc--cCcchHHhhccCCCEEEEcc
Q 017977           47 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMI--AEEPQWRDCIQGSTAVVNLA  124 (363)
Q Consensus        47 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~--~~~~~~~~~~~~~d~Vi~~a  124 (363)
                      ...+++|+|+|++..+|+.+++.|+..|.+|++++|+....................+  ++.+++.+.+.++|+||.+.
T Consensus       174 ~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~l~~ADIVIsAt  253 (320)
T 1edz_A          174 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVITGV  253 (320)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEECC
T ss_pred             CCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHHHhccCCEEEECC
Confidence            3456799999988889999999999999999999998544333222211000001111  23367889999999999988


Q ss_pred             CCC
Q 017977          125 GTP  127 (363)
Q Consensus       125 ~~~  127 (363)
                      +.+
T Consensus       254 g~p  256 (320)
T 1edz_A          254 PSE  256 (320)
T ss_dssp             CCT
T ss_pred             CCC
Confidence            864

>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6

Probab=96.88  E-value=0.0019  Score=55.72  Aligned_cols=66  Identities=20%  Similarity=0.225  Sum_probs=47.3

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      |+|.|+| +|.+|..+++.|.+.|++|++++|++...+......    .. ...  ..++.++ +++|+||-+..
T Consensus         1 m~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g----~~-~~~--~~~~~~~-~~~D~vi~av~   66 (279)
T 2f1k_A            1 MKIGVVG-LGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQ----LV-DEA--GQDLSLL-QTAKIIFLCTP   66 (279)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTT----SC-SEE--ESCGGGG-TTCSEEEECSC
T ss_pred             CEEEEEc-CcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCC----CC-ccc--cCCHHHh-CCCCEEEEECC
Confidence            5899999 699999999999999999999999876654432211    00 011  1234455 78999997764

>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6

Probab=96.87  E-value=0.0011  Score=58.86  Aligned_cols=74  Identities=26%  Similarity=0.354  Sum_probs=51.0

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeC--CCCcccccCCCCCcccc----CcccccCcchHHhhccCCCEEEEcc
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTR--SRSKAELIFPGKKTRFF----PGVMIAEEPQWRDCIQGSTAVVNLA  124 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r--~~~~~~~~~~~~~~~~~----~~~d~~~~~~~~~~~~~~d~Vi~~a  124 (363)
                      |+|.|+|+ |.+|..++..|.+.|++|++++|  ++...+.+.........    ..+...+.+++.+.++++|+||-+.
T Consensus         1 m~I~iiG~-G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~D~vi~~v   79 (335)
T 1txg_A            1 MIVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGV   79 (335)
T ss_dssp             CEEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECS
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEEccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHHHhcCCEEEEcC
Confidence            58999995 99999999999999999999999  76555444332110000    1112333335666788999999876


Q ss_pred             C
Q 017977          125 G  125 (363)
Q Consensus       125 ~  125 (363)
                      .
T Consensus        80 ~   80 (335)
T 1txg_A           80 S   80 (335)
T ss_dssp             C
T ss_pred             C
Confidence            4

>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*

Probab=96.87  E-value=0.0021  Score=56.21  Aligned_cols=102  Identities=11%  Similarity=0.152  Sum_probs=64.9

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCccccc-----------CCCCCcccc-C---c-ccccCcchHHhh
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI-----------FPGKKTRFF-P---G-VMIAEEPQWRDC  113 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----------~~~~~~~~~-~---~-~d~~~~~~~~~~  113 (363)
                      ..+|.|+|| |.+|+.++..++..|++|++++.++......           ......... .   . ..+....++.++
T Consensus         6 ~~~VaViGa-G~MG~giA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~~~l~~a   84 (319)
T 3ado_A            6 AGDVLIVGS-GLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEA   84 (319)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHH
T ss_pred             CCeEEEECC-cHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccccchHhH
Confidence            358999995 9999999999999999999999887542211           000000000 0   0 012233567778


Q ss_pred             ccCCCEEEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEecc
Q 017977          114 IQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVK  171 (363)
Q Consensus       114 ~~~~d~Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~  171 (363)
                      ++++|.||-++.-                 |+..-+.++..+.+.  -...-|+.|++
T Consensus        85 ~~~ad~ViEav~E-----------------~l~iK~~lf~~l~~~--~~~~aIlaSNT  123 (319)
T 3ado_A           85 VEGVVHIQECVPE-----------------NLDLKRKIFAQLDSI--VDDRVVLSSSS  123 (319)
T ss_dssp             TTTEEEEEECCCS-----------------CHHHHHHHHHHHHTT--CCSSSEEEECC
T ss_pred             hccCcEEeecccc-----------------HHHHHHHHHHHHHHH--hhhcceeehhh
Confidence            8999999977643                 233445677777773  33346777777

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=96.87  E-value=0.00054  Score=60.52  Aligned_cols=74  Identities=16%  Similarity=0.113  Sum_probs=52.1

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      .+.+|+|+||+|.+|...++.+...|.+|+++++... .+.....+.   ...+|..+.+.+.+.+.++|+||.+.|.
T Consensus       152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~~-~~~~~~lGa---~~~i~~~~~~~~~~~~~g~D~v~d~~g~  225 (321)
T 3tqh_A          152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKRN-HAFLKALGA---EQCINYHEEDFLLAISTPVDAVIDLVGG  225 (321)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHHH-HHHHHHHTC---SEEEETTTSCHHHHCCSCEEEEEESSCH
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccch-HHHHHHcCC---CEEEeCCCcchhhhhccCCCEEEECCCc
Confidence            4468999999999999999999999999999885432 222221110   1123444444477777899999999874

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=96.86  E-value=0.0013  Score=59.01  Aligned_cols=74  Identities=18%  Similarity=0.158  Sum_probs=53.5

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccC-CCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF-PGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      ...+|+|+|+ |.+|...++.+...|.+|+++++++.+.+... ..+.   ...+|..+.+.+.+...++|+||.+++.
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa---~~vi~~~~~~~~~~~~~g~D~vid~~g~  254 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGA---DDYVIGSDQAKMSELADSLDYVIDTVPV  254 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCC---SCEEETTCHHHHHHSTTTEEEEEECCCS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCC---ceeeccccHHHHHHhcCCCCEEEECCCC
Confidence            4468999995 99999999999889999999999887755433 2211   1123444444555555689999999985

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=96.84  E-value=0.00095  Score=61.87  Aligned_cols=43  Identities=19%  Similarity=0.171  Sum_probs=36.7

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCccccc
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI   90 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~   90 (363)
                      ..+.+|||+||+|.+|...++.+...|.+|+++++++.+.+..
T Consensus       219 ~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~  261 (447)
T 4a0s_A          219 KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAV  261 (447)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            3456999999999999999999999999999999877665544

>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A

Probab=96.84  E-value=0.0012  Score=60.54  Aligned_cols=70  Identities=16%  Similarity=0.136  Sum_probs=52.3

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEE
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVN  122 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~  122 (363)
                      .++++|+|+|+ |.+|+.+++.+.+.|++|++++.++..........    ....++.|.+.+.++++++|+|+.
T Consensus        33 ~~~~~IlIlG~-G~lg~~~~~aa~~lG~~v~v~d~~~~~p~~~~ad~----~~~~~~~d~~~l~~~a~~~D~V~~  102 (419)
T 4e4t_A           33 LPGAWLGMVGG-GQLGRMFCFAAQSMGYRVAVLDPDPASPAGAVADR----HLRAAYDDEAALAELAGLCEAVST  102 (419)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCTTCHHHHHSSE----EECCCTTCHHHHHHHHHHCSEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCcCchhhhCCE----EEECCcCCHHHHHHHHhcCCEEEE
Confidence            34569999995 99999999999999999999987654322111110    223577788888888889999983

>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*

Probab=96.83  E-value=0.0069  Score=46.45  Aligned_cols=83  Identities=14%  Similarity=0.109  Sum_probs=53.0

Q ss_pred             cEEEEecCc---chHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCCC
Q 017977           51 MTVSVTGAT---GFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  127 (363)
Q Consensus        51 ~~vlVtGat---G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~~  127 (363)
                      ++|+|+|++   |.+|..+++.|.+.|++|+.++-..   ..+         .+..  -..++.++.+.+|.++-+... 
T Consensus        23 ~~iaVVGas~~~g~~G~~~~~~l~~~G~~v~~Vnp~~---~~i---------~G~~--~y~sl~~l~~~vDlvvi~vp~-   87 (144)
T 2d59_A           23 KKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKY---EEV---------LGRK--CYPSVLDIPDKIEVVDLFVKP-   87 (144)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTC---SEE---------TTEE--CBSSGGGCSSCCSEEEECSCH-
T ss_pred             CEEEEEccCCCCCchHHHHHHHHHHCCCEEEEECCCC---CeE---------CCee--ccCCHHHcCCCCCEEEEEeCH-
Confidence            589999998   8999999999999999876664332   111         1111  222344444578988865431 


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEE
Q 017977          128 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLE  168 (363)
Q Consensus       128 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~  168 (363)
                                        .....+++.|.+  .+++.+++.
T Consensus        88 ------------------~~~~~vv~~~~~--~gi~~i~~~  108 (144)
T 2d59_A           88 ------------------KLTMEYVEQAIK--KGAKVVWFQ  108 (144)
T ss_dssp             ------------------HHHHHHHHHHHH--HTCSEEEEC
T ss_pred             ------------------HHHHHHHHHHHH--cCCCEEEEC
Confidence                              123356677776  677755543

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=96.81  E-value=0.00052  Score=59.14  Aligned_cols=72  Identities=19%  Similarity=0.238  Sum_probs=49.1

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCC-EEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      ..++++|+|+ |.+|+.++..|.+.|. +|++++|+.++.+.+......  ...+...+   +.++..++|+||++...
T Consensus       125 ~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~--~~~~~~~~---~~~l~~~aDiIInaTp~  197 (281)
T 3o8q_A          125 KGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAA--YGEVKAQA---FEQLKQSYDVIINSTSA  197 (281)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGG--GSCEEEEE---GGGCCSCEEEEEECSCC
T ss_pred             cCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhc--cCCeeEee---HHHhcCCCCEEEEcCcC
Confidence            4579999997 8999999999999995 999999998765543221100  00112222   22223678999998865

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=96.81  E-value=0.00094  Score=60.19  Aligned_cols=74  Identities=18%  Similarity=0.098  Sum_probs=52.4

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      .+.+|||+|+ |.+|...++.+...|.+|+++++++.+.+.....+.   ...+|..+.+.+.+...++|+||.+++.
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa---~~vi~~~~~~~~~~~~~g~Dvvid~~g~  267 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGA---DEVVNSRNADEMAAHLKSFDFILNTVAA  267 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTC---SEEEETTCHHHHHTTTTCEEEEEECCSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCC---cEEeccccHHHHHHhhcCCCEEEECCCC
Confidence            3468999997 889999999999999999999998876554332111   1113443434344444689999999985

>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}

Probab=96.81  E-value=0.00035  Score=59.21  Aligned_cols=66  Identities=9%  Similarity=0.125  Sum_probs=49.6

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCC----EEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEcc
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNH----QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA  124 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~----~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a  124 (363)
                      +|+|.|+| +|.+|..+++.|.+.|+    +|++++|++++.+.+...      .++.  -.++..++++++|+||-+.
T Consensus         2 ~~~i~iIG-~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~------~g~~--~~~~~~e~~~~aDvVilav   71 (247)
T 3gt0_A            2 DKQIGFIG-CGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEK------YGLT--TTTDNNEVAKNADILILSI   71 (247)
T ss_dssp             CCCEEEEC-CSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHH------HCCE--ECSCHHHHHHHCSEEEECS
T ss_pred             CCeEEEEC-ccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHH------hCCE--EeCChHHHHHhCCEEEEEe
Confidence            46899999 79999999999999998    999999988765544221      0111  2234556677899999877

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=96.80  E-value=0.0027  Score=52.17  Aligned_cols=37  Identities=16%  Similarity=0.355  Sum_probs=31.4

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCC
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS   85 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   85 (363)
                      ..+|+|.|+| +|.+|..++..|.+.|++|++++|++.
T Consensus        17 ~~~~~I~iiG-~G~mG~~la~~l~~~g~~V~~~~~~~~   53 (209)
T 2raf_A           17 FQGMEITIFG-KGNMGQAIGHNFEIAGHEVTYYGSKDQ   53 (209)
T ss_dssp             ---CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred             cCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence            3457999999 699999999999999999999988753

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=96.77  E-value=0.0086  Score=50.60  Aligned_cols=34  Identities=21%  Similarity=0.237  Sum_probs=30.6

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCC-EEEEEeCCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSR   84 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~   84 (363)
                      .++|+|+|+ |.+|+++++.|...|. +|++++++.
T Consensus        31 ~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~   65 (249)
T 1jw9_B           31 DSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDT   65 (249)
T ss_dssp             HCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred             CCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence            368999995 9999999999999996 899999886

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=96.76  E-value=0.00057  Score=61.10  Aligned_cols=74  Identities=24%  Similarity=0.166  Sum_probs=50.1

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCC-EEEEEeCCCCcccccCCCCCccccCcccccCcc---hHHhhcc--CCCEEEE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEP---QWRDCIQ--GSTAVVN  122 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~~~--~~d~Vi~  122 (363)
                      ...+|||+|+ |.+|...++.+...|. +|+++++++.+.+.......   ...+|..+.+   .+.+...  ++|+||+
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga---~~~~~~~~~~~~~~v~~~~~g~g~D~vid  242 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGA---DYVINPFEEDVVKEVMDITDGNGVDVFLE  242 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTC---SEEECTTTSCHHHHHHHHTTTSCEEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCC---CEEECCCCcCHHHHHHHHcCCCCCCEEEE
Confidence            4568999999 9999999999999999 99999998765443322111   1113333332   2222222  6899999


Q ss_pred             ccCC
Q 017977          123 LAGT  126 (363)
Q Consensus       123 ~a~~  126 (363)
                      +++.
T Consensus       243 ~~g~  246 (348)
T 2d8a_A          243 FSGA  246 (348)
T ss_dssp             CSCC
T ss_pred             CCCC
Confidence            9984

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	363
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	2e-17
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	2e-17
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	9e-15
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	6e-14
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	2e-13
d1r6da_	322	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	2e-13
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	4e-12
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	4e-12
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	7e-12
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	1e-10
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	8e-09
d2bkaa1	232	c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H	5e-08
d2a35a1	212	c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse	5e-08
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	7e-08
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	2e-07
d1ek6a_	346	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	5e-07
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	1e-06
d2blla1	342	c.2.1.2 (A:316-657) Polymyxin resistance protein A	4e-06
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	5e-06
d1vl0a_	281	c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD	6e-06
d1n2sa_	298	c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reduct	2e-05
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	3e-05
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	3e-05
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	5e-05
d1i24a_	393	c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1	5e-05
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	5e-05
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	7e-05
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	7e-05
d1gy8a_	383	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	1e-04
d1mb4a1	147	c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semiald	6e-04
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	6e-04
d2hjsa1	144	c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog	7e-04
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	8e-04
d1e5qa1	182	c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase	0.001
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	0.001
d1jaya_	212	c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase	0.001
d1eq2a_	307	c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimer	0.003

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 79.1 bits (193), Expect = 2e-17
 Identities = 41/266 (15%), Positives = 81/266 (30%), Gaps = 19/266 (7%)

Query: 48  ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEE 107
           A+  TV VTGA+G  G+ + ++L+  + +       RS       G +   F G +   +
Sbjct: 1   ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDAD 60

Query: 108 PQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVL 167
                  QG  A+V L       +   +  K  +   I           + PE V     
Sbjct: 61  SINPAF-QGIDALVILTSAVPKMKPGFDPTKGGRPEFIFED-------GQYPEQVDWIGQ 112

Query: 168 ELVKPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIR 227
           +       +      ++          + L     G ++  + +      +      +IR
Sbjct: 113 KNQIDAAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIR 172

Query: 228 IGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRG--- 284
            G +L K+GG       +  +  G      Q     +   D+  +  +AL     +    
Sbjct: 173 AGGLLDKEGG-------VRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKAF 225

Query: 285 -VINGTAPNPVRLAEMCDHLGNVLGR 309
            + +          +       V  R
Sbjct: 226 DLGSKPEGTSTPTKDFKALFSQVTSR 251

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 80.1 bits (196), Expect = 2e-17
 Identities = 44/306 (14%), Positives = 82/306 (26%), Gaps = 39/306 (12%)

Query: 50  QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK--AELIFPGKKTRFFPGVMIAEE 107
           + T++V GATG  G  L++   A  H VR    S     AE +        F G ++   
Sbjct: 3   KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNV 62

Query: 108 PQWRDCIQGSTA--VVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPS 165
           P      +G+    +   +          ++    K +          + + S  G  P+
Sbjct: 63  PLMDTLFEGAHLAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYGPWPA 122

Query: 166 VLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLAL 225
           V        +     Q  +                                    V   +
Sbjct: 123 VPMWAPKFTVENYVRQLGLPS--------------------------------TFVYAGI 150

Query: 226 IRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS--YR 283
                          +++P        P              D+   + +   +    + 
Sbjct: 151 YNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWN 210

Query: 284 GVINGTAPNPVRLAEMCDHLGNVLGRP-SWLPVPEFALKAVLGEGAFVVLEGQRVVPARA 342
           G         +   ++C      L R  +++ VP+  +K  +  G    LE   VV    
Sbjct: 211 GHRIALTFETLSPVQVCAAFSRALNRRVTYVQVPKVEIKVNIPVGYREQLEAIEVVFGEH 270

Query: 343 KELGFP 348
           K   FP
Sbjct: 271 KAPYFP 276

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 72.5 bits (177), Expect = 9e-15
 Identities = 44/286 (15%), Positives = 89/286 (31%), Gaps = 46/286 (16%)

Query: 51  MTVSVTGATGFIGRRLVQRLQADNHQVRV----LTRSRSKAELIFPGKKTRF-FPGVMIA 105
           M + +TG  GFIG  +V+ +  +     V    LT + +   L    +  R+ F    I 
Sbjct: 1   MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADIC 60

Query: 106 EEPQWRDCIQGS--TAVVNLAGTP-----------------IGTRWSSEIKKEIKESRIR 146
           +  +     +     AV++LA                    +GT    E+ ++   +   
Sbjct: 61  DSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGE 120

Query: 147 VTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWL---SDY-CAKVYCLVSFNR 202
                    + S + V   +    + +  +        T     S Y  +K         
Sbjct: 121 DKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASS------ 174

Query: 203 GVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFM--MFAGGPL---GSG 257
                 +    A +    +   +       G       K+IPL +     G PL   G G
Sbjct: 175 ------DHLVRAWRRTYGLPTIVTNCSNNYGP-YHFPEKLIPLVILNALEGKPLPIYGKG 227

Query: 258 QQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHL 303
            Q   W++++D    ++  ++        N    N  +  ++   +
Sbjct: 228 DQIRDWLYVEDHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTI 273

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.7 bits (170), Expect = 6e-14
 Identities = 45/264 (17%), Positives = 87/264 (32%), Gaps = 17/264 (6%)

Query: 55  VTGATGFIGRRLVQRLQADNHQVRVLTR-SRSKAELIFPGKKTRFFPGVMIAEEPQWRDC 113
           +TG  GF+G  L  +L  D H+V V+      +   +             +         
Sbjct: 6   ITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIG---HENFELINHDVVEPL 62

Query: 114 IQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPK 173
                 + +LA  P           +  ++    T  ++ L      G R  +L     +
Sbjct: 63  YIEVDQIYHLAS-PASPPNYMYNPIKTLKTNTIGTLNMLGLAKRV--GAR--LLLASTSE 117

Query: 174 YLMRAAHQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLG 233
                           +   +     ++ G  V  E    A    + V + + RI    G
Sbjct: 118 VYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVA-ETMCYAYMKQEGVEVRVARIFNTFG 176

Query: 234 -KDGGALAKMIPLFM--MFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSNPSYRGVIN 287
            +      +++  F+     G PL   GSG Q  ++ ++ D+VN +   + N +    +N
Sbjct: 177 PRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALM-NSNVSSPVN 235

Query: 288 GTAPNPVRLAEMCDHLGNVLGRPS 311
              P    + E    + N++G  S
Sbjct: 236 LGNPEEHTILEFAQLIKNLVGSGS 259

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 68.3 bits (165), Expect = 2e-13
 Identities = 38/291 (13%), Positives = 88/291 (30%), Gaps = 44/291 (15%)

Query: 51  MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL-------IFPGKKTRFFPGVM 103
             V + G TG+IG+R+V    +  H   VL R    + +        F     +      
Sbjct: 4   SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEA-S 62

Query: 104 IAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVR 163
           + +  +  D ++    V++     + +    E  K ++  +     K       S  G+ 
Sbjct: 63  LDDHQRLVDALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLP---SEFGMD 119

Query: 164 PSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRL 223
           P ++E       +    +  +    +  +  Y                            
Sbjct: 120 PDIMEHALQPGSITFIDKRKVRRAIEAASIPYT--------------------------- 152

Query: 224 ALIRIGIVLGKDGGALAKMIPLFMMFAGGPL--GSGQQWFSWIHLDDIVNLIYEALSNPS 281
             +   +  G   G+LA++    M      L  G G     W+  DD+     +++ +P 
Sbjct: 153 -YVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQ 211

Query: 282 YRG--VINGTAPNPVRLAEMCDHLGNVLGRP-SWLPVPEFALKAVLGEGAF 329
                +      N +   E+      +  +    + +      A + + ++
Sbjct: 212 TLNKTMYIRPPMNILSQKEVIQIWERLSEQNLDKIYISSQDFLADMKDKSY 262

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

 Score = 67.9 bits (165), Expect = 2e-13
 Identities = 51/277 (18%), Positives = 87/277 (31%), Gaps = 30/277 (10%)

Query: 51  MTVSVTGATGFIGRRLVQRLQADNHQVRV---------LTRSRSKAELIFPGKKTRF-FP 100
           M + VTG  GFIG   V++L A  +             LT + ++A L       R  F 
Sbjct: 1   MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFV 60

Query: 101 GVMIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPE 160
              I +       ++G  A+V+ A      R  +      + +     + +   ++    
Sbjct: 61  HGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVG 120

Query: 161 GVRPSVLELVKPKYLMRAAHQEMITW-LSDY-CAKVYCLVSFNRGVLVCREWEGTALKVN 218
            V       V       +  +       S Y  +K               +    A    
Sbjct: 121 RVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGS------------DLVARAYHRT 168

Query: 219 KDVRLALIRIGIVLGKDGGALAKMIPLFM--MFAGGPL---GSGQQWFSWIHLDDIVNLI 273
             + + + R     G       K+IPLF+  +  GG L   G G     W+H DD    I
Sbjct: 169 YGLDVRITRCCNNYGP-YQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGI 227

Query: 274 YEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRP 310
              L+      + +      +   E+   L + LG  
Sbjct: 228 ALVLAGGRAGEIYHIGGGLELTNRELTGILLDSLGAD 264

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 64.4 bits (155), Expect = 4e-12
 Identities = 46/336 (13%), Positives = 83/336 (24%), Gaps = 38/336 (11%)

Query: 52  TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE-------LIFPGKKTRFFPG--- 101
            V VTGA GF+   +V++L    ++VR   RS SK           +PG+          
Sbjct: 13  LVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDML 72

Query: 102 ----------VMIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKE-SRIRVTSK 150
                                    +     +     GT  +           R  +TS 
Sbjct: 73  KQGAYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSS 132

Query: 151 VVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVS-FNRGVLVCRE 209
            V  +   P      +    K   L      + +       +      S     +   + 
Sbjct: 133 TVSALIPKPN--VEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKF 190

Query: 210 WEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGG--PLGSGQQWFSWIHLD 267
            +        +  L    IG +   +  + +    +  +F G   P  +      ++   
Sbjct: 191 MDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQYYVSAV 250

Query: 268 DIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEG 327
           DI  L    L  P                  +      +         P     A   + 
Sbjct: 251 DIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLY--------PSKTFPADFPDQ 302

Query: 328 AFVVLEGQRVVPARA-KELGFPFKY---RYVKDALK 359
              + +          K LG P        +KD + 
Sbjct: 303 GQDLSKFDTAPSLEILKSLGRPGWRSIEESIKDLVG 338

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 63.7 bits (153), Expect = 4e-12
 Identities = 39/286 (13%), Positives = 70/286 (24%), Gaps = 35/286 (12%)

Query: 49  SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFF--PGVMIAE 106
           S+  + + GATG+IGR + +      H   +L R  + +      +    F   G  I  
Sbjct: 2   SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVH 61

Query: 107 EPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSV 166
                                       E +  I ++   V +      +E    V    
Sbjct: 62  GSIDDHASLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGNDVDNVH 121

Query: 167 LELVKPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALI 226
                       A                    F                          
Sbjct: 122 AVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSNCF-------------------------- 155

Query: 227 RIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRG-- 284
             G  L     A     P   +     LG G     ++  +DI     +A+ +P      
Sbjct: 156 -AGYFLRSLAQAGLTAPPRDKVV---ILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKT 211

Query: 285 VINGTAPNPVRLAEMCDHLGNVLGRP-SWLPVPEFALKAVLGEGAF 329
           +      N + L E+       + +      VPE  +  ++ +  F
Sbjct: 212 LYLRLPANTLSLNELVALWEKKIDKTLEKAYVPEEEVLKLIADTPF 257

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.0 bits (149), Expect = 7e-12
 Identities = 29/236 (12%), Positives = 67/236 (28%), Gaps = 41/236 (17%)

Query: 49  SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEP 108
           +   +++ GATG  G   + +     ++V VL R  S+     P         V+ A   
Sbjct: 2   AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAA-- 59

Query: 109 QWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLE 168
                + G  AV+ L GT          + ++  + +        +      GV   V  
Sbjct: 60  DVDKTVAGQDAVIVLLGT----------RNDLSPTTVMSEGARNIVAAMKAHGVDKVVAC 109

Query: 169 LVKPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRI 228
                          +  ++D   +++ ++  +                   ++   +  
Sbjct: 110 TSAFLLWDPTKVPPRLQAVTDDHIRMHKVLRES------------------GLKYVAVMP 151

Query: 229 GIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRG 284
             +  +       +              G+     I   D+ + +   L+   Y G
Sbjct: 152 PHIGDQPLTGAYTV-----------TLDGRGPSRVISKHDLGHFMLRCLTTDEYDG 196

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 59.6 bits (143), Expect = 1e-10
 Identities = 47/291 (16%), Positives = 91/291 (31%), Gaps = 39/291 (13%)

Query: 51  MTVSVTGATGFIGRRLVQRLQADNHQVRVL------TRSRSKAELIFPGKKTRFFPG-VM 103
           M V VTG +G+IG     +L  + H V +L       RS         GK   F  G + 
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIR 60

Query: 104 IAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVR 163
                           V++ AG       S +   E  ++ +  T +++  +  +   V+
Sbjct: 61  NEALMTEILHDHAIDTVIHFAG-LKAVGESVQKPLEYYDNNVNGTLRLISAMRAA--NVK 117

Query: 164 PSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRL 223
             +       Y  +     + ++ +      Y         ++         K   D  +
Sbjct: 118 NFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQ-----KAQPDWSI 172

Query: 224 ALIRIGIVLG---------KDGGALAKMIPLFMMFAGG------------PLGSGQQWFS 262
           AL+R    +G            G    ++P     A G            P   G     
Sbjct: 173 ALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRD 232

Query: 263 WIHLDDIVNLIYEALSNPSYR---GVINGTAPNPVRLAEMCDHLGNVLGRP 310
           +IH+ D+ +    A+   + +    + N  A     + ++ +      G+P
Sbjct: 233 YIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKP 283

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 54.2 bits (129), Expect = 8e-09
 Identities = 31/251 (12%), Positives = 60/251 (23%), Gaps = 21/251 (8%)

Query: 52  TVSVTGATGFIGRRLVQRLQADNHQVRVLTR-----SRSKAELIFPGKKTRFFPGVMIAE 106
           +  VTG TG  G  L + L    ++V  L       +R +   +      ++  G M   
Sbjct: 2   SALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADA 61

Query: 107 EPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSV 166
               R  I+     V           S               + +++ I +     R   
Sbjct: 62  CSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETR--- 118

Query: 167 LELVKPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALI 226
                      +    +I          +   S      +   W     + +  +  +  
Sbjct: 119 -----FYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWITVNYRESFGLHASSG 173

Query: 227 RIGIVLG---KDGGALAKMIPLFMMFAGG-----PLGSGQQWFSWIHLDDIVNLIYEALS 278
            +               K+         G      LG+      W    D V  ++  L 
Sbjct: 174 ILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQ 233

Query: 279 NPSYRGVINGT 289
                  +  T
Sbjct: 234 QDKADDYVVAT 244

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.9 bits (120), Expect = 5e-08
 Identities = 32/239 (13%), Positives = 64/239 (26%), Gaps = 31/239 (12%)

Query: 47  KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAE 106
           +    +V + GA+G  GR L++ +       +V    R K        K      V   +
Sbjct: 11  RMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEK 70

Query: 107 EPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSV 166
              +    QG        GT  G   +    +  ++                        
Sbjct: 71  LDDYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRD------------------------ 106

Query: 167 LELVKPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALI 226
                       A        +   +K     S    + V  E E    +  K  R ++ 
Sbjct: 107 ----YVLKSAELAKAGGCKHFNLLSSKGADKSSNFLYLQVKGEVEAKV-EELKFDRYSVF 161

Query: 227 RIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGV 285
           R G++L       ++     +    G L         + +  +V  +   +  P  + +
Sbjct: 162 RPGVLLCD--RQESRPGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPRDKQM 218

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 50.5 bits (119), Expect = 5e-08
 Identities = 10/38 (26%), Positives = 19/38 (50%)

Query: 49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK 86
          +   V + GATG  G  L+ R+ ++    +V+  +R  
Sbjct: 1  TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKA 38

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 51.5 bits (122), Expect = 7e-08
 Identities = 37/286 (12%), Positives = 74/286 (25%), Gaps = 46/286 (16%)

Query: 51  MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG----------------K 94
           + +S+TGA GFI   + +RL+ + H V      +++                       K
Sbjct: 16  LKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLK 75

Query: 95  KTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDL 154
            T     V              S   V +    + +    E  +     R    S     
Sbjct: 76  VTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIY 135

Query: 155 -----INESPEGVRPSVLELVKPKYLM----RAAHQEMITWLSDYCAKVYCLVSFNRGVL 205
                +  +   ++ S     +P+        A  +    +  D+  +       N    
Sbjct: 136 PEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGP 195

Query: 206 VCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIH 265
                 G         R                                G G Q  S+  
Sbjct: 196 FGTWKGGREKAPAAFCR--------------------KAQTSTDRFEMWGDGLQTRSFTF 235

Query: 266 LDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPS 311
           +D+ V  +     +  +R  +N  +   V + EM + + +   +  
Sbjct: 236 IDECVEGVLRLTKSD-FREPVNIGSDEMVSMNEMAEMVLSFEEKKL 280

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 50.0 bits (118), Expect = 2e-07
 Identities = 45/324 (13%), Positives = 92/324 (28%), Gaps = 27/324 (8%)

Query: 51  MTVSVTGATGFIGRRLVQRLQADNHQVRV-----LTRSRSKAEL-IFPGKKTRFFPGVMI 104
             + VTG  GFIG   V  +  ++  V V     LT + +KA L    G +     G + 
Sbjct: 3   KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDI- 61

Query: 105 AEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRP 164
             + +  D +      +           S         +    T  +++   +       
Sbjct: 62  -ADAELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHH 120

Query: 165 SVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRGVL-----VCREWEGTALKVNK 219
              + V   Y      +++         K     ++N            +    A   + 
Sbjct: 121 VSTDEV---YGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF 177

Query: 220 DVRLALIRIGIVLGKDGGALAKMIPLFMMFAGG----PLGSGQQWFSWIHLDDIVNLIYE 275
            V+  +       G        +         G      G G+    WIH +D    ++ 
Sbjct: 178 GVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWA 237

Query: 276 ALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQ 335
            L+           A       E+ + +   +G+P         +    G      ++  
Sbjct: 238 ILTKGRMGETYLIGADGEKNNKEVLELILEKMGQPKDAYDH---VTDRAGHDLRYAIDAS 294

Query: 336 RVVPARAKELGFPFKYRYVKDALK 359
           +    R  ELG+  ++    + L+
Sbjct: 295 K---LR-DELGWTPQFTDFSEGLE 314

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.5 bits (114), Expect = 5e-07
 Identities = 40/287 (13%), Positives = 74/287 (25%), Gaps = 33/287 (11%)

Query: 55  VTGATGFIGRRLVQRLQADNHQVRVL-------TRSRSKAELI-----FPGKKTRFFPGV 102
           VTG  G+IG   V  L    +   V+           S  E +       G+   F    
Sbjct: 7   VTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMD 66

Query: 103 MIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGV 162
           ++ +    R   + S   V           S +   +     +  T ++++++     GV
Sbjct: 67  ILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKA--HGV 124

Query: 163 RPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVR 222
           +  V       Y             +  C   Y    F    ++    +         +R
Sbjct: 125 KNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLR 184

Query: 223 LALIRIGIVLGKDG----GALAKMIPLFMMFAGG------------PLGSGQQWFSWIHL 266
                     G  G    G    ++P     A G                G     +IH+
Sbjct: 185 YFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHV 244

Query: 267 DDIVN---LIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRP 310
            D+          L       + N        + +M   +    G+ 
Sbjct: 245 VDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKK 291

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 47.3 bits (111), Expect = 1e-06
 Identities = 38/281 (13%), Positives = 72/281 (25%), Gaps = 27/281 (9%)

Query: 47  KASQMTVSVTGATGFIGRRLVQRLQADNHQVRV---LTRSRSKA-----ELIFPGKKTRF 98
            A      +TG  GFIG  L++ L   + +V           +       L+   + + F
Sbjct: 13  PAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNF 72

Query: 99  FPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES 158
                        +        V           S         + I     ++    ++
Sbjct: 73  KFIQGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDA 132

Query: 159 PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVN 218
                          Y   ++       L      +   +S         E         
Sbjct: 133 KVQSF---------TYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRC 183

Query: 219 KDVRLALIRIGIVLGKDG---GALAKMIPLFM--MFAGGPL---GSGQQWFSWIHLDDIV 270
                  +R   V G+     GA A +IP +   M  G  +   G G+    + ++++ V
Sbjct: 184 YGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTV 243

Query: 271 NLIYEALSNPS--YRGVINGTAPNPVRLAEMCDHLGNVLGR 309
                A +        V N        L ++   L + L  
Sbjct: 244 QANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAE 284

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

 Score = 45.7 bits (106), Expect = 4e-06
 Identities = 15/52 (28%), Positives = 20/52 (38%), Gaps = 1/52 (1%)

Query: 51  MTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPG 101
           M V + G  GFIG  L +RL  ++H +V  L                 F  G
Sbjct: 1   MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEG 52

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score = 45.3 bits (106), Expect = 5e-06
 Identities = 16/105 (15%), Positives = 35/105 (33%), Gaps = 14/105 (13%)

Query: 55  VTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI 114
           + G  G +G  + ++L+       VL R+R +  L+       FF    I          
Sbjct: 7   IAGHRGMVGSAIRRQLEQRGDVELVL-RTRDELNLLDSRAVHDFFASERI---------- 55

Query: 115 QGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESP 159
                V   A    G   ++    +     + + S ++   +++ 
Sbjct: 56  ---DQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQND 97

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

 Score = 45.2 bits (105), Expect = 6e-06
 Identities = 10/33 (30%), Positives = 18/33 (54%)

Query: 51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRS 83
          M + +TGA G +GR + ++L+  N +V      
Sbjct: 2  MKILITGANGQLGREIQKQLKGKNVEVIPTDVQ 34

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} Length = 298

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

 Score = 43.4 bits (100), Expect = 2e-05
 Identities = 8/35 (22%), Positives = 16/35 (45%)

Query: 51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS 85
          M + + G TG +G  L + L    + + +   S+ 
Sbjct: 1  MNILLFGKTGQVGWELQRSLAPVGNLIALDVHSKE 35

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 43.3 bits (100), Expect = 3e-05
 Identities = 13/40 (32%), Positives = 17/40 (42%)

Query: 52 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF 91
           V VTG TGF G  L   LQ     V+  + +      +F
Sbjct: 10 RVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLF 49

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 43.1 bits (100), Expect = 3e-05
 Identities = 11/34 (32%), Positives = 15/34 (44%)

Query: 52 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS 85
             +TG TG  G  L + L    ++V  L R  S
Sbjct: 3  IALITGITGQDGSYLTEFLLGKGYEVHGLIRRSS 36

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 42.5 bits (99), Expect = 5e-05
 Identities = 9/31 (29%), Positives = 14/31 (45%)

Query: 52 TVSVTGATGFIGRRLVQRLQADNHQVRVLTR 82
             +TG TG  G  L + L    ++V  + R
Sbjct: 3  VALITGVTGQDGSYLAEFLLEKGYEVHGIKR 33

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 42.3 bits (97), Expect = 5e-05
 Identities = 8/30 (26%), Positives = 13/30 (43%)

Query: 51 MTVSVTGATGFIGRRLVQRLQADNHQVRVL 80
            V V G  G+ G      L   N++V ++
Sbjct: 2  SRVMVIGGDGYCGWATALHLSKKNYEVCIV 31

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 42.3 bits (98), Expect = 5e-05
 Identities = 10/29 (34%), Positives = 13/29 (44%)

Query: 52 TVSVTGATGFIGRRLVQRLQADNHQVRVL 80
           V VTG  G+IG   V  L  + +   V 
Sbjct: 3  IVLVTGGAGYIGSHTVVELIENGYDCVVA 31

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.9 bits (97), Expect = 7e-05
 Identities = 10/31 (32%), Positives = 15/31 (48%)

Query: 55 VTGATGFIGRRLVQRLQADNHQVRVLTRSRS 85
          +TG TG  G  L + L    ++V  + R  S
Sbjct: 6  ITGITGQDGSYLAEFLLEKGYEVHGIVRRSS 36

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score = 42.0 bits (97), Expect = 7e-05
 Identities = 11/47 (23%), Positives = 18/47 (38%), Gaps = 3/47 (6%)

Query: 55 VTGATGFIGRRLVQRLQADNHQVRV---LTRSRSKAELIFPGKKTRF 98
          +TG  GF+G  L     +    + V   L+R  +   L +      F
Sbjct: 5  ITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNF 51

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} Length = 383

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

 Score = 41.3 bits (95), Expect = 1e-04
 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)

Query: 49 SQMTVSVTGATGFIGRRLVQRLQAD-NHQVRVL 80
          S M V V G  G+IG   V+ L  D NH V ++
Sbjct: 1  SHMRVLVCGGAGYIGSHFVRALLRDTNHSVVIV 33

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]} Length = 147

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

 Score = 37.7 bits (87), Expect = 6e-04
 Identities = 11/50 (22%), Positives = 19/50 (38%), Gaps = 4/50 (8%)

Query: 51 MTVSVTGATGFIGRRLVQRLQADNH----QVRVLTRSRSKAELIFPGKKT 96
          M V + G  G +G  L+QR+  +      +    + S+        GK  
Sbjct: 1  MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPAPNFGKDA 50

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.8 bits (90), Expect = 6e-04
 Identities = 35/181 (19%), Positives = 64/181 (35%), Gaps = 22/181 (12%)

Query: 52  TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI-------FPGKKTRFFPGVMI 104
              VTGA   IGR   + L     +V ++  +              F  +KT F     +
Sbjct: 5   VALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQ-CDV 63

Query: 105 AEEPQWRDCIQGSTA-------VVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINE 157
           A++ Q RD  +           +VN AG      W   ++  +  S I  T   +D +++
Sbjct: 64  ADQQQLRDTFRKVVDHFGRLDILVNNAGVNNEKNWEKTLQINLV-SVISGTYLGLDYMSK 122

Query: 158 SPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKV 217
              G    ++       +   A    +     YCA  + +V F R   +      + +++
Sbjct: 123 QNGGEGGIII------NMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMNSGVRL 176

Query: 218 N 218
           N
Sbjct: 177 N 177

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]} Length = 144

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 37.5 bits (86), Expect = 7e-04
 Identities = 13/67 (19%), Positives = 26/67 (38%), Gaps = 3/67 (4%)

Query: 51  MTVSVTGATGFIGRRLVQRLQADNH---QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEE 107
           + V+V GATG +G  LV  L   +    ++ +L  + S  + +   + +     V   + 
Sbjct: 3   LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGFAESSLRVGDVDSFDF 62

Query: 108 PQWRDCI 114
                  
Sbjct: 63  SSVGLAF 69

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.1 bits (88), Expect = 8e-04
 Identities = 15/78 (19%), Positives = 32/78 (41%), Gaps = 2/78 (2%)

Query: 52  TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI--FPGKKTRFFPGVMIAEEPQ 109
            + +T A   IG+        +  +V     + SK + +  +PG +TR        +  Q
Sbjct: 8   VIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQ 67

Query: 110 WRDCIQGSTAVVNLAGTP 127
           + + ++    + N+AG  
Sbjct: 68  FANEVERLDVLFNVAGFV 85

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 37.7 bits (86), Expect = 0.001
 Identities = 20/112 (17%), Positives = 40/112 (35%), Gaps = 9/112 (8%)

Query: 49  SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEP 108
           +  +V + G+ GF+ R  +  L     +V V  R+   A+ +  G +      + + ++ 
Sbjct: 1   ATKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDA 59

Query: 109 QWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPE 160
                +     V++L                + +S IR    VV     SP 
Sbjct: 60  ALDAEVAKHDLVISL--------IPYTFHATVIKSAIRQKKHVVTTSYVSPA 103

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 37.9 bits (87), Expect = 0.001
 Identities = 31/200 (15%), Positives = 68/200 (34%), Gaps = 33/200 (16%)

Query: 49  SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI----FPGKKTRFFPGVMI 104
           S  +V VTGA   IG  LVQ+L  D +   ++  +R   +          +    P + +
Sbjct: 2   SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLP-LTV 60

Query: 105 AEEPQWRDCIQ---------GSTAVVNLAGTPIGTRWSSEIKKEIKESRIRV-------- 147
             +      +          G + ++N AG  +    ++E  + +   ++ V        
Sbjct: 61  TCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLL 120

Query: 148 TSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMIT---------WLSDYCAKVYCLV 198
           T K++ L+  +        L + +   +  ++    IT          +  Y      + 
Sbjct: 121 TQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAIN 180

Query: 199 SFNRGVLVCREWEGTALKVN 218
            F R   +  + +   + V 
Sbjct: 181 MFGRT--LAVDLKDDNVLVV 198

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 37.3 bits (85), Expect = 0.001
 Identities = 15/38 (39%), Positives = 22/38 (57%)

Query: 51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE 88
          M V++ G TG +G+ L  RL    H++ V +R   KAE
Sbjct: 1  MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAE 38

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

 Score = 36.5 bits (82), Expect = 0.003
 Identities = 10/27 (37%), Positives = 14/27 (51%), Gaps = 1/27 (3%)

Query: 55 VTGATGFIGRRLVQRLQADN-HQVRVL 80
          VTG  GFIG  +V+ L       + V+
Sbjct: 4  VTGGAGFIGSNIVKALNDKGITDILVV 30

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	363
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	100.0
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	100.0
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	100.0
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	100.0
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	100.0
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	100.0
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	100.0
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	100.0
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	100.0
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	100.0
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	100.0
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	100.0
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	100.0
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	100.0
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	100.0
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	100.0
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	100.0
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.97
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.96
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.94
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.94
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.94
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.94
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.93
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.89
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.88
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	99.83
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.82
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.81
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.81
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	99.81
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	99.8
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	99.8
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	99.8
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	99.79
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	99.79
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	99.79
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	99.79
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	99.79
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	99.79
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	99.79
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.78
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	99.78
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	99.77
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	99.77
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	99.77
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.77
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	99.77
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	99.76
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	99.76
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.76
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	99.76
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	99.75
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	99.75
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	99.75
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.74
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	99.74
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	99.74
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.73
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.73
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	99.73
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.73
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	99.72
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	99.72
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.72
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.72
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	99.71
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	99.7
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	99.7
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.7
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	99.68
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	99.68
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.66
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.66
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	99.65
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.65
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.65
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.63
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.61
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	99.6
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	99.6
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.59
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.59
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.56
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.56
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.5
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.49
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.45
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.39
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.36
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.34
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	99.29
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.09
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	98.71
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	98.53
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	98.45
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	98.41
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	98.35
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	98.27
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	98.25
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	98.24
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	98.22
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.21
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	98.15
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	98.15
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	98.14
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	98.11
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	98.11
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	98.08
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	98.03
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	98.02
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	98.01
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	97.99
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	97.98
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	97.96
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.95
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	97.93
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	97.92
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	97.92
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.87
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.81
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	97.81
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.81
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	97.77
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.77
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	97.75
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	97.72
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	97.72
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	97.67
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	97.65
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	97.63
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	97.62
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.62
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.57
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	97.56
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.55
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	97.55
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.53
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	97.52
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	97.52
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	97.48
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	97.47
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.46
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	97.43
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	97.43
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.42
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	97.4
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	97.35
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.33
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.29
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	97.24
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	97.24
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	97.21
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	97.17
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	97.15
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	97.11
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.11
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	97.07
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	96.97
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	96.96
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	96.87
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	96.8
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	96.76
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	96.75
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	96.75
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	96.72
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	96.71
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	96.69
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	96.64
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	96.54
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	96.48
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	96.43
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	96.41
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	96.35
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	96.35
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	96.32
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	96.27
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	96.27
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	96.27
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.26
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	96.23
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	96.21
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	96.16
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	96.16
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	96.14
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	96.13
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	96.13
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.12
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	96.1
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	96.1
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	96.07
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	96.06
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	96.05
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	96.03
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	96.03
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	96.01
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	96.01
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	95.96
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	95.92
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	95.9
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	95.88
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	95.85
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	95.85
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	95.85
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	95.84
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	95.82
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	95.76
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	95.67
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	95.64
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	95.63
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	95.58
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	95.58
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	95.57
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	95.55
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.49
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	95.48
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	95.48
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	95.45
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	95.42
d2dt5a2	126	Transcriptional repressor Rex, C-terminal domain {	95.4
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	95.37
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	95.33
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	95.29
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.28
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	95.22
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	95.21
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	95.09
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	95.08
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	95.08
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	95.02
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	94.97
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	94.94
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	94.93
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	94.91
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	94.9
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	94.79
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	94.7
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	94.53
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	94.39
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	94.32
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	94.3
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	94.26
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.23
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	94.2
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	94.18
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	94.1
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	94.04
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	94.0
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	93.95
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	93.83
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	93.82
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	93.41
d1nhpa1	198	NADH peroxidase {Enterococcus faecalis [TaxId: 135	93.35
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	93.29
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	93.25
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	92.97
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	92.96
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	92.87
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	92.76
d1vkza2	90	Glycinamide ribonucleotide synthetase (GAR-syn), N	92.76
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	92.57
d1kifa1	246	D-aminoacid oxidase, N-terminal domain {Pig (Sus s	92.28
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	92.2
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	92.17
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	91.91
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	91.84
d1gsoa2	105	Glycinamide ribonucleotide synthetase (GAR-syn), N	91.83
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	91.68
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	91.58
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	91.53
d1iuka_	136	Hypothetical protein TT1466 {Thermus thermophilus	91.49
d1xhca1	167	NADH oxidase /nitrite reductase {Pyrococcus furios	91.45
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	91.21
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	91.2
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	91.2
d1vjta1	193	Putative alpha-glucosidase TM0752 {Thermotoga mari	91.14
d2vapa1	209	Cell-division protein FtsZ {Archaeon Methanococcus	91.12
d1w5fa1	194	Cell-division protein FtsZ {Thermotoga maritima [T	91.0
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	90.69
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	90.63
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	90.61
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	90.51
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	90.44
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	90.06
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	89.59
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	89.16
d1d7ya1	183	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	89.14
d2bw0a2	203	10-formyltetrahydrofolate dehydrogenase domain 1 {	88.92
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	88.51
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	88.08
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	87.81
d2bisa1	437	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	87.63
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	87.53
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	86.68
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	86.46
d2blna2	203	Polymyxin resistance protein ArnA, N-terminal doma	86.4
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	86.15
d1fmta2	206	Methionyl-tRNAfmet formyltransferase {Escherichia	86.03
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	85.99
d1n4wa1	367	Cholesterol oxidase of GMC family {Streptomyces sp	85.4
d1lc0a1	172	Biliverdin reductase {Rat (Rattus norvegicus) [Tax	85.16
d1x7da_	340	Ornithine cyclodeaminase {Pseudomonas putida [TaxI	85.13
d1ofua1	198	Cell-division protein FtsZ {Pseudomonas aeruginosa	84.25
d1pn0a1	360	Phenol hydroxylase {Soil-living yeast (Trichosporo	84.22
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	84.14
d1cjca2	230	Adrenodoxin reductase of mitochondrial p450 system	83.96
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	83.52
d2nvwa1	237	Galactose/lactose metabolism regulatory protein GA	82.48
d1rp0a1	278	Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara	82.46
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	82.41
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	81.57
d1m6ia1	213	Apoptosis-inducing factor (AIF) {Human (Homo sapie	80.73
d1lqta2	239	Ferredoxin:NADP reductase FprA {Mycobacterium tube	80.52
d1vmea1	148	ROO-like flavoprotein TM0755, C-terminal domain {T	80.09

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.5e-41  Score=299.26  Aligned_cols=290  Identities=16%  Similarity=0.148  Sum_probs=213.8

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCCCCCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGT  130 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~~~~~  130 (363)
                      +|||||||+||||++|+++|+++|++|++++|...........  ......+|+.+.+.++.++.++|+|||+|+.... 
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~d~VihlAa~~~~-   78 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEH--WIGHENFELINHDVVEPLYIEVDQIYHLASPASP-   78 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGG--GTTCTTEEEEECCTTSCCCCCCSEEEECCSCCSH-
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHH--hcCCCceEEEehHHHHHHHcCCCEEEECcccCCc-
Confidence            6999999999999999999999999999999854432221111  1114567888888888888899999999997432 


Q ss_pred             CCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC---CcccccccCCCc-chhhhhhhcccchhhHHH
Q 017977          131 RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM---RAAHQEMITWLS-DYCAKVYCLVSFNRGVLV  206 (363)
Q Consensus       131 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg---~~~~~e~~~~~~-~~~~~~~~~~~y~~~k~~  206 (363)
                      .....++...+++|+.++.+|+++|++  .++ ++||+||. ++||   ..+.+|+..... ++..    .+.|+.+|..
T Consensus        79 ~~~~~~~~~~~~~Nv~g~~~ll~~~~~--~~~-k~I~~SS~-~vy~~~~~~~~~e~~~~~~~~~~p----~~~Y~~sK~~  150 (312)
T d2b69a1          79 PNYMYNPIKTLKTNTIGTLNMLGLAKR--VGA-RLLLASTS-EVYGDPEVHPQSEDYWGHVNPIGP----RACYDEGKRV  150 (312)
T ss_dssp             HHHTTCHHHHHHHHHHHHHHHHHHHHH--HTC-EEEEEEEG-GGGBSCSSSSBCTTCCCBCCSSST----THHHHHHHHH
T ss_pred             hhHHhCHHHHHHHHHHHHHHHHHHHHH--cCC-cEEEEECh-heecCCCCCCCCccccCCCCCCCC----ccHHHHHHHH
Confidence            223345678899999999999999999  665 69999998 8998   345565543211 1111    1336666755


Q ss_pred             HHHHHHHHhccCCCceEEEEeeceEEeCCCCc-ccchHHHH--HHHhCCCC---CCCCCccccccHHHHHHHHHHHhcCC
Q 017977          207 CREWEGTALKVNKDVRLALIRIGIVLGKDGGA-LAKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSNP  280 (363)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~-~~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~D~a~a~~~~~~~~  280 (363)
                      .+....... ..+|++++++||++||||+... ...+++.+  +...++++   +++.+.++|+|++|+|++++.+++..
T Consensus       151 ~E~~~~~~~-~~~~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~D~~~~~~~~~~~~  229 (312)
T d2b69a1         151 AETMCYAYM-KQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN  229 (312)
T ss_dssp             HHHHHHHHH-HHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSS
T ss_pred             HHHHHHHHH-HHhCCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEEHHHHHHHHHHHHhhc
Confidence            555443333 3349999999999999997543 23455544  55677775   78899999999999999999888655


Q ss_pred             CCCceEEeeCCCCcCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhccCceeeecCcccChhhHH-HcCCCcccccHHHHHH
Q 017977          281 SYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAK-ELGFPFKYRYVKDALK  359 (363)
Q Consensus       281 ~~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~lG~~p~~~~~~~~l~  359 (363)
                       ..+.||+++++.+++.++++.+++.+|.+..+.....    ..++     .....++++|++ .|||+|+++ ++++|+
T Consensus       230 -~~~~~n~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~----~~~~-----~~~~~~d~~k~~~~lgw~p~~~-l~~~I~  298 (312)
T d2b69a1         230 -VSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSE----AQDD-----PQKRKPDIKKAKLMLGWEPVVP-LEEGLN  298 (312)
T ss_dssp             -CCSCEEESCCCEEEHHHHHHHHHHHHTCCCCEEEECC----CTTC-----CCCCCBCCHHHHHHHCCCCCSC-HHHHHH
T ss_pred             -cCCceEecCCcccchhhHHHHHHHHhCCCCceEECCC----CCCC-----CCeeeECHHHHHHHHCCCCCCC-HHHHHH
Confidence             5779999999999999999999999998743211000    0111     123556899996 589999997 999999


Q ss_pred             HHhC
Q 017977          360 AIMS  363 (363)
Q Consensus       360 ~~~~  363 (363)
                      ++++
T Consensus       299 ~~i~  302 (312)
T d2b69a1         299 KAIH  302 (312)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9863

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3.1e-41  Score=305.28  Aligned_cols=300  Identities=13%  Similarity=0.055  Sum_probs=210.1

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcc-----cccC----CCCCccccCcccccCcchHHhhccC--CCE
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-----ELIF----PGKKTRFFPGVMIAEEPQWRDCIQG--STA  119 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~~~~----~~~~~~~~~~~d~~~~~~~~~~~~~--~d~  119 (363)
                      |+|||||||||||++|+++|++.||+|++++|..+..     ..+.    .......+..+|+.|.+++.+++++  +|+
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~   81 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDE   81 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCSE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCCCE
Confidence            6899999999999999999999999999999965321     1111    1111223556899999999999985  499


Q ss_pred             EEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhC-CCCCCCeEEEeccceecC---CcccccccCCCcchhhhhh
Q 017977          120 VVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLELVKPKYLM---RAAHQEMITWLSDYCAKVY  195 (363)
Q Consensus       120 Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~SS~~~~yg---~~~~~e~~~~~~~~~~~~~  195 (363)
                      |||+|+... ...+..++..++++|+.++.+|+++|++. ..+.++|||+||. ++||   ..+++|+++..+.      
T Consensus        82 v~h~aa~~~-~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~-~vYG~~~~~~~~E~~~~~P~------  153 (357)
T d1db3a_          82 VYNLGAMSH-VAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTS-ELYGLVQEIPQKETTPFYPR------  153 (357)
T ss_dssp             EEECCCCCT-TTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEG-GGGTTCCSSSBCTTSCCCCC------
T ss_pred             EEEeecccc-cchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEch-hhhCCCCCCCcCCCCCCCCC------
Confidence            999999743 34455677889999999999999999983 1233459999998 9998   5678888765431      


Q ss_pred             hcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc---cchHHHH-HHHhCCCC----CCCCCccccccHH
Q 017977          196 CLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL---AKMIPLF-MMFAGGPL----GSGQQWFSWIHLD  267 (363)
Q Consensus       196 ~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~---~~~~~~~-~~~~~~~~----~~~~~~~~~i~v~  267 (363)
                        +.|+.+|+..++........ .+++++++||+++|||..+..   ..+...+ ....+.+.    +++++.++++|++
T Consensus       154 --~~Y~~sK~~~E~~~~~~~~~-~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~  230 (357)
T d1db3a_         154 --SPYAVAKLYAYWITVNYRES-YGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAK  230 (357)
T ss_dssp             --SHHHHHHHHHHHHHHHHHHH-HCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHH
T ss_pred             --ChHHHHHHHHHHHHHHHHHH-hCCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecceeec
Confidence              12566675555554444433 489999999999999964321   1222222 33344432    7889999999999


Q ss_pred             HHHHHHHHHhcCCCCCceEEeeCCCCcCHHHHHHHHHHHhCCCCCC-CCcHHHHHHH---------hccCce-e------
Q 017977          268 DIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWL-PVPEFALKAV---------LGEGAF-V------  330 (363)
Q Consensus       268 D~a~a~~~~~~~~~~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~~-~~~~~~~~~~---------~~~~~~-~------  330 (363)
                      |+|++++.++++. ..+.||+++++++|+.|+++.+.+.+|..... ..+.......         ...... .      
T Consensus       231 D~~~a~~~~~~~~-~~~~yni~sg~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (357)
T d1db3a_         231 DYVKMQWMMLQQE-QPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPR  309 (357)
T ss_dssp             HHHHHHHHTTSSS-SCCCEEECCCCCEEHHHHHHHHHHTTTEEEEEESCGGGCEEEEEEECSSSCTTCCTTCEEEEECGG
T ss_pred             hHHHHHHHHHhCC-CCCeEEECCCCceehHHHHHHHHHHhCCccccccccccccchhhhhhcccccccccCceeEeeccc
Confidence            9999999998765 46799999999999999999999999864211 0000000000         000000 0      


Q ss_pred             -----eecCcccChhhHHH-cCCCcccccHHHHHHHHhC
Q 017977          331 -----VLEGQRVVPARAKE-LGFPFKYRYVKDALKAIMS  363 (363)
Q Consensus       331 -----~~~~~~~~~~k~~~-lG~~p~~~~~~~~l~~~~~  363 (363)
                           ......+|++|+++ |||+|+++ ++|+|+++++
T Consensus       310 ~~r~~~~~~~~~d~skakk~LGw~P~~s-l~egI~~~I~  347 (357)
T d1db3a_         310 YFRPAEVETLLGDPTKAHEKLGWKPEIT-LREMVSEMVA  347 (357)
T ss_dssp             GCCCCC-CCCCBCCHHHHHHHCCCCCSC-HHHHHHHHHH
T ss_pred             cCCCccccccccCHHHHHHHHCCCcCCC-HHHHHHHHHH
Confidence                 01123458999965 89999997 9999999873

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=100.00  E-value=6.6e-41  Score=299.08  Aligned_cols=290  Identities=18%  Similarity=0.143  Sum_probs=213.8

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEE------EEEeCCCCc--ccc--cCCCCCccccCcccccCcchHHhhccCCCEE
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQV------RVLTRSRSK--AEL--IFPGKKTRFFPGVMIAEEPQWRDCIQGSTAV  120 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V------~~~~r~~~~--~~~--~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~V  120 (363)
                      |||||||||||||++|++.|+++||+|      +++++....  ...  .........+...|..+.........++|.|
T Consensus         1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~v   80 (322)
T d1r6da_           1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAI   80 (322)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEEEeccccchhhhccccccceE
Confidence            699999999999999999999999854      444433211  111  1111112224456777888888888899999


Q ss_pred             EEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC---CcccccccCCCcchhhhhhhc
Q 017977          121 VNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM---RAAHQEMITWLSDYCAKVYCL  197 (363)
Q Consensus       121 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg---~~~~~e~~~~~~~~~~~~~~~  197 (363)
                      +|+|+.... .....+....+++|+.++.+++++|.+  .+++++||+||. ++||   ..+++|+.+..+.        
T Consensus        81 i~~a~~~~~-~~~~~~~~~~~~~N~~gt~~ll~~~~~--~~~~~~I~~Ss~-~~yg~~~~~~~~E~~~~~p~--------  148 (322)
T d1r6da_          81 VHFAAESHV-DRSIAGASVFTETNVQGTQTLLQCAVD--AGVGRVVHVSTN-QVYGSIDSGSWTESSPLEPN--------  148 (322)
T ss_dssp             EECCSCCCH-HHHHHCCHHHHHHHTHHHHHHHHHHHH--TTCCEEEEEEEG-GGGCCCSSSCBCTTSCCCCC--------
T ss_pred             Eeecccccc-cccccchHHHhhhhHHHHHHHHHHHHH--cCCceEEEeecc-eeecCCCCCCCCCCCCCCCC--------
Confidence            999987422 333445677889999999999999999  788999999999 8998   5678888775432        


Q ss_pred             ccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHH--HHHhCCCC---CCCCCccccccHHHHHHH
Q 017977          198 VSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNL  272 (363)
Q Consensus       198 ~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~D~a~a  272 (363)
                      +.|+.+|...+......... ++++++++||+++|||++.. ..+++.+  +...++++   +++.+.++|+|++|+|++
T Consensus       149 ~~Y~~sK~~~E~~~~~~~~~-~~~~~~~lR~~~vyGp~~~~-~~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~a~a  226 (322)
T d1r6da_         149 SPYAASKAGSDLVARAYHRT-YGLDVRITRCCNNYGPYQHP-EKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRG  226 (322)
T ss_dssp             SHHHHHHHHHHHHHHHHHHH-HCCCEEEEEECEEECTTCCT-TSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHH-hCCCEEEEEeeeEECcCCCc-CcHHHHHHHHHHcCCCcEEecCCCeEEccEEHHHHHHH
Confidence            22555565555554444433 49999999999999997643 3445544  55667765   788999999999999999


Q ss_pred             HHHHhcCCCCCceEEeeCCCCcCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhccCceeeecCcccChhhHHH-cCCCccc
Q 017977          273 IYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKY  351 (363)
Q Consensus       273 ~~~~~~~~~~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lG~~p~~  351 (363)
                      +..+++++..+++||+++++++++.|+++.+.+.+|.+.....        .............++++|+++ |||+|++
T Consensus       227 i~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~--------~~~~~~~~~~~~~~d~~k~~~~lg~~p~~  298 (322)
T d1r6da_         227 IALVLAGGRAGEIYHIGGGLELTNRELTGILLDSLGADWSSVR--------KVADRKGHDLRYSLDGGKIERELGYRPQV  298 (322)
T ss_dssp             HHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHTCCGGGEE--------EECCCTTCCCBCCBCCHHHHHHHCCCCCS
T ss_pred             HHHHHhCCCCCCeeEEeecccchhHHHHHHHHHHhCCCcccee--------ecCCCCCCCceeeeCHHHHHHHHCCCCCC
Confidence            9999998887789999999999999999999999997621100        000000011224467999964 8999999


Q ss_pred             ccHHHHHHHHhC
Q 017977          352 RYVKDALKAIMS  363 (363)
Q Consensus       352 ~~~~~~l~~~~~  363 (363)
                      + ++|+|+++++
T Consensus       299 ~-~eegI~~~i~  309 (322)
T d1r6da_         299 S-FADGLARTVR  309 (322)
T ss_dssp             C-HHHHHHHHHH
T ss_pred             C-HHHHHHHHHH
Confidence            7 9999999874

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=100.00  E-value=8.2e-40  Score=296.08  Aligned_cols=307  Identities=13%  Similarity=0.096  Sum_probs=211.7

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEE-EEeCCCCcc--cccC--CCCCccccCcccccCcchHHhhcc--CCCEEEEc
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVR-VLTRSRSKA--ELIF--PGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNL  123 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~-~~~r~~~~~--~~~~--~~~~~~~~~~~d~~~~~~~~~~~~--~~d~Vi~~  123 (363)
                      |||||||||||||++|+++|++.|++|+ ++++.....  ..+.  .......+..+|+.|.+.+..+++  ++|+|||+
T Consensus         1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vihl   80 (361)
T d1kewa_           1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHL   80 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhCCCCEEEEC
Confidence            6999999999999999999999998754 455432221  1111  111122245679999999988887  58999999


Q ss_pred             cCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCC-------CCCCCeEEEeccceecC---CcccccccCCCcchh--
Q 017977          124 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESP-------EGVRPSVLELVKPKYLM---RAAHQEMITWLSDYC--  191 (363)
Q Consensus       124 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-------~~~~~~v~~SS~~~~yg---~~~~~e~~~~~~~~~--  191 (363)
                      |+.. ....+..++...+++|+.++.+++++|.+..       .++++|||+||. .+||   ..+..|.....+.+.  
T Consensus        81 Aa~~-~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~-~vyg~~~~~~~~~~~~~~~~~~e~  158 (361)
T d1kewa_          81 AAES-HVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTD-EVYGDLPHPDEVENSVTLPLFTET  158 (361)
T ss_dssp             CSCC-CHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEG-GGGCCCCCGGGSCTTSCCCCBCTT
T ss_pred             cccc-chhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccc-eeeCCCccCCccccccCCCCcccC
Confidence            9974 3233445667899999999999999998720       134579999999 9999   222222222111111  


Q ss_pred             hhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHH--HHHhCCCC---CCCCCccccccH
Q 017977          192 AKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL---GSGQQWFSWIHL  266 (363)
Q Consensus       192 ~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~i~v  266 (363)
                      ......+.|+.+|...+......... .+++++++||+++|||.+.. ..+++.+  +...++++   +++++.++|+|+
T Consensus       159 ~~~~p~s~Yg~sK~~~E~~~~~~~~~-~~i~~~~lR~~~vyGp~~~~-~~~i~~~i~~~~~g~~~~v~g~g~~~r~~i~v  236 (361)
T d1kewa_         159 TAYAPSSPYSASKASSDHLVRAWRRT-YGLPTIVTNCSNNYGPYHFP-EKLIPLVILNALEGKPLPIYGKGDQIRDWLYV  236 (361)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHH-HCCCEEEEEECEEESTTCCT-TSHHHHHHHHHHHTCCEEEETTSCCEEEEEEH
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHH-hCCCEEEEecCceECcCCCc-CcHHHHHHHHHHcCCCcEEeCCCCeEEeCEEH
Confidence            01122344777776666655554443 49999999999999997654 3344444  56677775   788999999999


Q ss_pred             HHHHHHHHHHhcCCCCCceEEeeCCCCcCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhccCceeeecCcccChhhHH-Hc
Q 017977          267 DDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAK-EL  345 (363)
Q Consensus       267 ~D~a~a~~~~~~~~~~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~l  345 (363)
                      +|+|+++..++++...+++||+++++++++.|+++.+.+.++.......... .................+|++|++ +|
T Consensus       237 ~D~a~ai~~~~~~~~~~~~~Ni~s~~~~s~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~~k~~~~l  315 (361)
T d1kewa_         237 EDHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYR-EQITYVADRPGHDRRYAIDAGKISREL  315 (361)
T ss_dssp             HHHHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSSCGG-GGEEEECCCTTCCCBCCBCCHHHHHHH
T ss_pred             HHHHHHHHHHHhcCCCCCeEEECCCCCcchHHHHhHhhhhcccccccccCcc-cceeecCCCCCCCceeeeCHHHHHHHH
Confidence            9999999999988777779999999999999999999998865421111000 000000000001123456899996 48


Q ss_pred             CCCcccccHHHHHHHHhC
Q 017977          346 GFPFKYRYVKDALKAIMS  363 (363)
Q Consensus       346 G~~p~~~~~~~~l~~~~~  363 (363)
                      ||+|+++ ++|+|+++++
T Consensus       316 gw~P~~~-l~e~i~~ti~  332 (361)
T d1kewa_         316 GWKPLET-FESGIRKTVE  332 (361)
T ss_dssp             CCCCSCC-HHHHHHHHHH
T ss_pred             CCCCCCC-HHHHHHHHHH
Confidence            9999998 9999999874

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=7.3e-39  Score=290.59  Aligned_cols=295  Identities=17%  Similarity=0.143  Sum_probs=208.9

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCCCC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPI  128 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~~~  128 (363)
                      +.|||||||||||||++|+++|+++||+|++++|...........  ...+..+|+.+.+.+.++++++|+|||+|+...
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~d~Vih~a~~~~   91 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMF--CDEFHLVDLRVMENCLKVTEGVDHVFNLAADMG   91 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGT--CSEEEECCTTSHHHHHHHHTTCSEEEECCCCCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchhhhcc--cCcEEEeechhHHHHHHHhhcCCeEeecccccc
Confidence            457999999999999999999999999999998865543221111  011444688888888888999999999998754


Q ss_pred             CCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC---CcccccccCCCcchhhhhhhcccchhhHH
Q 017977          129 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM---RAAHQEMITWLSDYCAKVYCLVSFNRGVL  205 (363)
Q Consensus       129 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg---~~~~~e~~~~~~~~~~~~~~~~~y~~~k~  205 (363)
                      ...............|+.++.++++++.+  .+++++|++||. .+|+   ..+.++......... .....+.|+.+|.
T Consensus        92 ~~~~~~~~~~~~~~~n~~gt~~ll~~~~~--~~vk~~i~~SS~-~~~~~~~~~~~~~~~~~~~e~~-~~~p~~~Yg~sK~  167 (363)
T d2c5aa1          92 GMGFIQSNHSVIMYNNTMISFNMIEAARI--NGIKRFFYASSA-CIYPEFKQLETTNVSLKESDAW-PAEPQDAFGLEKL  167 (363)
T ss_dssp             CHHHHTTCHHHHHHHHHHHHHHHHHHHHH--TTCSEEEEEEEG-GGSCGGGSSSSSSCEECGGGGS-SBCCSSHHHHHHH
T ss_pred             cccccccccccccccccchhhHHHHhHHh--hCcccccccccc-ccccccccccccccccccccCC-cCCCCCHHHHHHH
Confidence            43323455678899999999999999999  899999999999 8888   223333221110000 0011233666665


Q ss_pred             HHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc---cch-HHHH--HHHhCCC---CCCCCCccccccHHHHHHHHHHH
Q 017977          206 VCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL---AKM-IPLF--MMFAGGP---LGSGQQWFSWIHLDDIVNLIYEA  276 (363)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~---~~~-~~~~--~~~~~~~---~~~~~~~~~~i~v~D~a~a~~~~  276 (363)
                      ..++...... ...|++++++||+++||+.+...   ... ....  ......+   .+++.+.++|+|++|+|+++..+
T Consensus       168 ~~E~~~~~~~-~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~~~~~~~~  246 (363)
T d2c5aa1         168 ATEELCKHYN-KDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRL  246 (363)
T ss_dssp             HHHHHHHHHH-HHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHH-HHhCCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeEEEEeehhHHHHHHHHH
Confidence            5554444333 33499999999999999975321   111 1111  2222222   27888999999999999999999


Q ss_pred             hcCCCCCceEEeeCCCCcCHHHHHHHHHHHhCCCCCCC-CcHHHHHHHhccCceeeecCcccChhhHHH-cCCCcccccH
Q 017977          277 LSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLP-VPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYRYV  354 (363)
Q Consensus       277 ~~~~~~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lG~~p~~~~~  354 (363)
                      ++.. .+++||+++++.+++.|+++.+.+.+|++..+. .+.      ..     ......+|++|+++ |||+|+++ +
T Consensus       247 ~~~~-~~~~~ni~~~~~~s~~~l~~~i~~~~g~~~~i~~~~~------~~-----~~~~~~~d~ska~~~LGw~p~~s-l  313 (363)
T d2c5aa1         247 TKSD-FREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPG------PE-----GVRGRNSDNNLIKEKLGWAPNMR-L  313 (363)
T ss_dssp             HHSS-CCSCEEECCCCCEEHHHHHHHHHHTTTCCCCEEEECC------CC-----CCSBCEECCHHHHHHHSCCCCCC-H
T ss_pred             HhCC-CCCeEEEecCCcccHHHHHHHHHHHhCCCCceEeCCC------CC-----CccccccCHHHHHHHhCCCCCCC-H
Confidence            8765 467999999999999999999999999874321 110      00     11234467999965 89999997 9


Q ss_pred             HHHHHHHhC
Q 017977          355 KDALKAIMS  363 (363)
Q Consensus       355 ~~~l~~~~~  363 (363)
                      +|+|+++++
T Consensus       314 eegi~~ti~  322 (363)
T d2c5aa1         314 KEGLRITYF  322 (363)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999999863

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=100.00  E-value=5.5e-39  Score=289.43  Aligned_cols=300  Identities=13%  Similarity=0.058  Sum_probs=215.3

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCC--cc--cccC-CCCCccccCcccccCcchHHhhccCCCEEEEc
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS--KA--ELIF-PGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNL  123 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~--~~--~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~  123 (363)
                      +||+|||||||||||++|+++|+++|++|.+++++..  ..  .... .......+..+|+.|.+.+..++.+++.|+|+
T Consensus         1 ~~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~~~~~v~~~   80 (346)
T d1oc2a_           1 QFKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHY   80 (346)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred             CcCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHHHHHhhhhhhhhh
Confidence            4789999999999999999999999987666655321  11  1100 01111225568999999999999999999999


Q ss_pred             cCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcc-------hhhhhhh
Q 017977          124 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSD-------YCAKVYC  196 (363)
Q Consensus       124 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~-------~~~~~~~  196 (363)
                      |+.... .....++...+++|+.++.++++++..  .+ .++|++||+ .+||..+..++.+....       .......
T Consensus        81 a~~~~~-~~~~~~~~~~~~~N~~g~~nll~~~~~--~~-~k~i~~ss~-~vyg~~~~~~~~~~~~~~~~~~~~e~~~~~p  155 (346)
T d1oc2a_          81 AAESHN-DNSLNDPSPFIHTNFIGTYTLLEAARK--YD-IRFHHVSTD-EVYGDLPLREDLPGHGEGPGEKFTAETNYNP  155 (346)
T ss_dssp             CSCCCH-HHHHHCCHHHHHHHTHHHHHHHHHHHH--HT-CEEEEEEEG-GGGCCBCCGGGSTTTTCSTTSSBCTTSCCCC
T ss_pred             hhcccc-cchhhCcccceeeehHhHHhhhhhhcc--cc-ccccccccc-eEecccCccccccccccCcccccccCCCCCC
Confidence            987422 223455678899999999999999999  55 468999999 89985444444331110       1111223


Q ss_pred             cccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHH-HHHhCCCC---CCCCCccccccHHHHHHH
Q 017977          197 LVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPL---GSGQQWFSWIHLDDIVNL  272 (363)
Q Consensus       197 ~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~i~v~D~a~a  272 (363)
                      .+.|+.+|+.++......... .+++++++||+++|||.......+...+ ....+.++   +++.+.++++|++|+|++
T Consensus       156 ~s~Y~~sK~~~E~~~~~~~~~-~~i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~i~~~g~~~r~~i~v~D~a~a  234 (346)
T d1oc2a_         156 SSPYSSTKAASDLIVKAWVRS-FGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTG  234 (346)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHH-HCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHH-cCCCEEEEeecceeCCCCCccchhHHHHHHHHcCCceeEeCCCCccccccchhhHHHH
Confidence            355788887766655544433 4999999999999999754333333333 44555554   789999999999999999


Q ss_pred             HHHHhcCCCCCceEEeeCCCCcCHHHHHHHHHHHhCCCCC-CCCcHHHHHHHhccCceeeecCcccChhhHH-HcCCCcc
Q 017977          273 IYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSW-LPVPEFALKAVLGEGAFVVLEGQRVVPARAK-ELGFPFK  350 (363)
Q Consensus       273 ~~~~~~~~~~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~lG~~p~  350 (363)
                      ++.++.++..++.||++++++.++.++++.+.+.++.+.. +.....    ..++     .....+|++|++ .|||+|+
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~----~~~~-----~~~~~~d~~k~~~~LGw~P~  305 (346)
T d1oc2a_         235 VWAILTKGRMGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVTD----RAGH-----DLRYAIDASKLRDELGWTPQ  305 (346)
T ss_dssp             HHHHHHHCCTTCEEEECCSCEEEHHHHHHHHHHHTTCCTTCSEEECC----CTTC-----CCBCCBCCHHHHHHHCCCCS
T ss_pred             HHHHHhhcccCccccccccccccchHHHHHHHHHhCCCCcceEECCC----CCCC-----CceeeeCHHHHHHHHCCCCc
Confidence            9999988888889999999999999999999999997632 110000    0011     123446799996 5999999


Q ss_pred             cccHHHHHHHHhC
Q 017977          351 YRYVKDALKAIMS  363 (363)
Q Consensus       351 ~~~~~~~l~~~~~  363 (363)
                      +++|+|+|+++++
T Consensus       306 ~t~l~e~i~~ti~  318 (346)
T d1oc2a_         306 FTDFSEGLEETIQ  318 (346)
T ss_dssp             CCCHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHH
Confidence            8679999999874

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=6.1e-39  Score=288.59  Aligned_cols=297  Identities=16%  Similarity=0.080  Sum_probs=216.8

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccc-------cCCC--CCccccCcccccCcchHHhhccCCCE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL-------IFPG--KKTRFFPGVMIAEEPQWRDCIQGSTA  119 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~~~--~~~~~~~~~d~~~~~~~~~~~~~~d~  119 (363)
                      ++|+|||||||||||++|+++|+++||+|++++|.......       ....  .....+...|..|...+.....+.+.
T Consensus        15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~~~   94 (341)
T d1sb8a_          15 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVDY   94 (341)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCSE
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccccccccc
Confidence            45799999999999999999999999999999985432110       1000  00011344677788888888889999


Q ss_pred             EEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC---CcccccccCCCcchhhhhhh
Q 017977          120 VVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM---RAAHQEMITWLSDYCAKVYC  196 (363)
Q Consensus       120 Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg---~~~~~e~~~~~~~~~~~~~~  196 (363)
                      |+|+++.. ....+..++...+++|+.++.+++++|.+  .+++++||+||. ++||   ..+++|+++..+.       
T Consensus        95 v~~~~a~~-~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~--~~~~~~i~~SS~-~vyg~~~~~~~~E~~~~~p~-------  163 (341)
T d1sb8a_          95 VLHQAALG-SVPRSINDPITSNATNIDGFLNMLIAARD--AKVQSFTYAASS-STYGDHPGLPKVEDTIGKPL-------  163 (341)
T ss_dssp             EEECCSCC-CHHHHHHCHHHHHHHHTHHHHHHHHHHHH--TTCSEEEEEEEG-GGGTTCCCSSBCTTCCCCCC-------
T ss_pred             cccccccc-cccccccCccchhheeehhHHHHHHHHHh--cCCceEEEcccc-eeeCCCCCCCccCCCCCCCC-------
Confidence            99999863 22334566778999999999999999999  789899999999 8999   5678888775431       


Q ss_pred             cccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCC---cccchHHHH--HHHhCCCC---CCCCCccccccHHH
Q 017977          197 LVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGG---ALAKMIPLF--MMFAGGPL---GSGQQWFSWIHLDD  268 (363)
Q Consensus       197 ~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~---~~~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~D  268 (363)
                       +.|+.+|+..+....... ...+++++++||+++||+...   ....+++.+  +...++++   +++.+.++|+|++|
T Consensus       164 -~~Y~~sK~~~E~~~~~~~-~~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~i~v~D  241 (341)
T d1sb8a_         164 -SPYAVTKYVNELYADVFS-RCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIEN  241 (341)
T ss_dssp             -SHHHHHHHHHHHHHHHHH-HHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHH
T ss_pred             -CcchHHHHHHHHHHHHHH-HHhCCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEEEEEEec
Confidence             235556655554444333 334899999999999999653   223455444  66777776   78899999999999


Q ss_pred             HHHHHHHHhcCCC--CCceEEeeCCCCcCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhccCceeeecCcccChhhHHH-c
Q 017977          269 IVNLIYEALSNPS--YRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-L  345 (363)
Q Consensus       269 ~a~a~~~~~~~~~--~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-l  345 (363)
                      +|+++..++....  .+++||+++++..++.|+++.|.+.++.+...-.+..    .+.............+++|+++ |
T Consensus       242 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~si~~i~~~i~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~d~~k~~~~L  317 (341)
T d1sb8a_         242 TVQANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREP----VYRDFREGDVRHSLADISKAAKLL  317 (341)
T ss_dssp             HHHHHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCCCCCC----EEECCCTTCCSBCCBCCHHHHHHT
T ss_pred             cchhhhhhhhccccccceeeeecccccchHHHHHHHHHHHhccccccccccc----cccCCCCCCcCeeeeCHHHHHHHH
Confidence            9999999887654  4559999999999999999999999986521110000    0000000011223467899975 9


Q ss_pred             CCCcccccHHHHHHHHhC
Q 017977          346 GFPFKYRYVKDALKAIMS  363 (363)
Q Consensus       346 G~~p~~~~~~~~l~~~~~  363 (363)
                      ||+|+++ ++++|+++++
T Consensus       318 Gw~p~~s-l~~gi~~ti~  334 (341)
T d1sb8a_         318 GYAPKYD-VSAGVALAMP  334 (341)
T ss_dssp             CCCCCCC-HHHHHHHHHH
T ss_pred             CCCcCCC-HHHHHHHHHH
Confidence            9999997 9999999874

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.6e-38  Score=284.01  Aligned_cols=292  Identities=16%  Similarity=0.190  Sum_probs=208.1

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCccccc-----CCCCCccccCcccccCcchHHhhcc--CCCEEEEc
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI-----FPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNL  123 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~Vi~~  123 (363)
                      |||||||||||||++|++.|+++||+|++++|........     ........+..+|+.|.+.+.++++  ++|+|||+
T Consensus         1 MKiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViHl   80 (338)
T d1udca_           1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF   80 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEEEC
Confidence            6899999999999999999999999999998744332110     0001112255689999999999987  79999999


Q ss_pred             cCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC---CcccccccCCCcchhhhhhhcccc
Q 017977          124 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM---RAAHQEMITWLSDYCAKVYCLVSF  200 (363)
Q Consensus       124 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg---~~~~~e~~~~~~~~~~~~~~~~~y  200 (363)
                      |+.. ....+..++...+++|+.++.+++++|++  .+++++|++||. ++|+   ..+..|..+...+       ...|
T Consensus        81 Aa~~-~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~--~~v~~~i~~Ss~-~vy~~~~~~~~~e~~~~~~p-------~~~Y  149 (338)
T d1udca_          81 AGLK-AVGESVQKPLEYYDNNVNGTLRLISAMRA--ANVKNFIFSSSA-TVYGDQPKIPYVESFPTGTP-------QSPY  149 (338)
T ss_dssp             CSCC-CHHHHHHCHHHHHHHHHHHHHHHHHHHHH--HTCCEEEEEEEG-GGGCSCCSSSBCTTSCCCCC-------SSHH
T ss_pred             CCcc-chhhHHhCHHHHHHhHHHHHHHHHHHHHH--hCCCEEEecCcc-eEEccccccccccccccCCC-------cchH
Confidence            9963 33334456778999999999999999999  789999999998 8887   2333333322110       1224


Q ss_pred             hhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCc---------ccchHHHH-HHHh--CCCC---------CCCCC
Q 017977          201 NRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA---------LAKMIPLF-MMFA--GGPL---------GSGQQ  259 (363)
Q Consensus       201 ~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~---------~~~~~~~~-~~~~--~~~~---------~~~~~  259 (363)
                      +.+|...+...........+++++++||+++||+....         ...+++.+ ....  ..++         .++.+
T Consensus       150 ~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~~  229 (338)
T d1udca_         150 GKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTG  229 (338)
T ss_dssp             HHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTTSSC
T ss_pred             HHHHhhhhHHHHHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCCCCc
Confidence            55565555555555555558999999999999985421         13455544 2222  2222         45788


Q ss_pred             ccccccHHHHHHHHHHHhcC---CCCCceEEeeCCCCcCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhccCceeeecCcc
Q 017977          260 WFSWIHLDDIVNLIYEALSN---PSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQR  336 (363)
Q Consensus       260 ~~~~i~v~D~a~a~~~~~~~---~~~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  336 (363)
                      .++|+|++|++.+...+...   ....++||+++++++++.|+++.+.+.+|.+..+.....    ..++     .....
T Consensus       230 ~rd~i~v~D~~~~~~~~~~~~~~~~~~~i~Ni~~~~~~si~e~~~~i~~~~g~~~~~~~~~~----~~~~-----~~~~~  300 (338)
T d1udca_         230 VRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPR----REGD-----LPAYW  300 (338)
T ss_dssp             EECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSSCEEHHHHHHHHHHHHTSCCCEEEECC----CTTC-----CSBCC
T ss_pred             eeeEEEEeehhhhccccccccccccCcceeeecCCCCCcHHHHHHHHHHHHCCCCceEECCC----CCCC-----CCEee
Confidence            89999999999888776643   223459999999999999999999999997632211000    0111     12345


Q ss_pred             cChhhHHH-cCCCcccccHHHHHHHHhC
Q 017977          337 VVPARAKE-LGFPFKYRYVKDALKAIMS  363 (363)
Q Consensus       337 ~~~~k~~~-lG~~p~~~~~~~~l~~~~~  363 (363)
                      +|++|+++ |||+|+++ ++|+|+++++
T Consensus       301 ~d~~k~~~~lgwkp~~~-l~egi~~ti~  327 (338)
T d1udca_         301 ADASKADRELNWRVTRT-LDEMAQDTWH  327 (338)
T ss_dssp             BCCHHHHHHHCCCCCCC-HHHHHHHHHH
T ss_pred             ECHHHHHHHHCCCcCCC-HHHHHHHHHH
Confidence            68999975 99999997 9999999874

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=7.4e-38  Score=281.60  Aligned_cols=303  Identities=15%  Similarity=0.177  Sum_probs=209.3

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCC-CEEEEEeCCCCcccccCCCCCccccCcccccCcchHHh-hccCCCEEEEccCCCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRD-CIQGSTAVVNLAGTPI  128 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~~~~d~Vi~~a~~~~  128 (363)
                      |||||||||||||++|+++|+++| ++|+++++.......+..... ..+..+|+.+.+++.+ +++++|+|||+|+...
T Consensus         1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~-~~~i~~Di~~~~~~~~~~~~~~d~Vih~a~~~~   79 (342)
T d2blla1           1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPH-FHFVEGDISIHSEWIEYHVKKCDVVLPLVAIAT   79 (342)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTT-EEEEECCTTTCSHHHHHHHHHCSEEEECBCCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCC-eEEEECccCChHHHHHHHHhCCCcccccccccc
Confidence            699999999999999999999999 599999987765555443322 2355678888766654 6778999999999743


Q ss_pred             CCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC---CcccccccCCCcchhhhhhhcccchhhHH
Q 017977          129 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM---RAAHQEMITWLSDYCAKVYCLVSFNRGVL  205 (363)
Q Consensus       129 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg---~~~~~e~~~~~~~~~~~~~~~~~y~~~k~  205 (363)
                      . .....++...++.|+.++.++++++.+  .+.+ ++|+||. .+|+   ....+|..+... +.........|+.+|.
T Consensus        80 ~-~~~~~~~~~~~~~nv~gt~~ll~~~~~--~~~~-~~~~ss~-~~~~~~~~~~~~~~~~~~~-~~~~~~p~~~Y~~sK~  153 (342)
T d2blla1          80 P-IEYTRNPLRVFELDFEENLRIIRYCVK--YRKR-IIFPSTS-EVYGMCSDKYFDEDHSNLI-VGPVNKPRWIYSVSKQ  153 (342)
T ss_dssp             H-HHHHHSHHHHHHHHTHHHHHHHHHHHH--TTCE-EEEECCG-GGGBTCCCSSBCTTTCCCB-CCCTTCGGGHHHHHHH
T ss_pred             c-cccccCCcccccccccccccccccccc--cccc-ccccccc-ccccccccccccccccccc-ccccCCCcchhhhccc
Confidence            2 223445667899999999999999999  5654 6788887 7888   333333332211 1111112344777776


Q ss_pred             HHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc-------cchHHHH--HHHhCCCC---CCCCCccccccHHHHHHHH
Q 017977          206 VCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL-------AKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLI  273 (363)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~-------~~~~~~~--~~~~~~~~---~~~~~~~~~i~v~D~a~a~  273 (363)
                      ..++........ .+++++++||+.+||+.....       ......+  +...|+++   +++++.++++|++|+|+++
T Consensus       154 ~~E~~~~~~~~~-~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v~D~~~a~  232 (342)
T d2blla1         154 LLDRVIWAYGEK-EGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEAL  232 (342)
T ss_dssp             HHHHHHHHHHHH-HCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHH
T ss_pred             chhhhhhhhhcc-cCceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeeccccccccee
Confidence            666666555444 389999999999999854221       2223333  55667764   7889999999999999999


Q ss_pred             HHHhcCCC---CCceEEeeCCC-CcCHHHHHHHHHHHhCCCCCC-CCcHHHH------HHHhccCceeeecCcccChhhH
Q 017977          274 YEALSNPS---YRGVINGTAPN-PVRLAEMCDHLGNVLGRPSWL-PVPEFAL------KAVLGEGAFVVLEGQRVVPARA  342 (363)
Q Consensus       274 ~~~~~~~~---~~g~~~i~~~~-~~s~~el~~~i~~~~g~~~~~-~~~~~~~------~~~~~~~~~~~~~~~~~~~~k~  342 (363)
                      ..+++++.   .+++||+++++ .+|+.|+++.+.+.+|..... ..|.+..      ...... ........+.|++|+
T Consensus       233 ~~~~~~~~~~~~g~~~Nig~~~~~~t~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~k~  311 (342)
T d2blla1         233 YRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGK-GYQDVEHRKPSIRNA  311 (342)
T ss_dssp             HHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGGSCCCCCEEEC-------------CCCCCBCCHHH
T ss_pred             eeehhhccccCCCeEEEEecccchhHHHHHHHHHHHHhCCCccccccCcccccceecccccccc-ccccccccccCHHHH
Confidence            99998753   34599998765 479999999999999876321 1110000      000000 000112345689999


Q ss_pred             HH-cCCCcccccHHHHHHHHhC
Q 017977          343 KE-LGFPFKYRYVKDALKAIMS  363 (363)
Q Consensus       343 ~~-lG~~p~~~~~~~~l~~~~~  363 (363)
                      ++ |||+|+++ ++|+|+++++
T Consensus       312 ~~~lgw~P~~s-leegl~~ti~  332 (342)
T d2blla1         312 HRCLDWEPKID-MQETIDETLD  332 (342)
T ss_dssp             HHHHCCCCCCC-HHHHHHHHHH
T ss_pred             HHHHCCCcCCC-HHHHHHHHHH
Confidence            65 99999997 9999999874

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=4.1e-37  Score=274.31  Aligned_cols=292  Identities=13%  Similarity=0.071  Sum_probs=205.3

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccc--c--CCCCCccccCcccccCcchHHhhccC--CCEEEEcc
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL--I--FPGKKTRFFPGVMIAEEPQWRDCIQG--STAVVNLA  124 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~--~~~~~~~~~~~~d~~~~~~~~~~~~~--~d~Vi~~a  124 (363)
                      ++|||||||||||++|+++|+++||+|++++|..+....  +  ........+..+|+.|.+.+.+.+.+  .++++|+|
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~a   80 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNLA   80 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhhhhhcccccccccccc
Confidence            589999999999999999999999999999997654221  1  11111122456899999988887764  57888888


Q ss_pred             CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC---CcccccccCCCcchhhhhhhcccch
Q 017977          125 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM---RAAHQEMITWLSDYCAKVYCLVSFN  201 (363)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg---~~~~~e~~~~~~~~~~~~~~~~~y~  201 (363)
                      +.. .......++...++.|+.++.++++++.+  .+.+++++.+|+..+||   ..+.+|+++..+.        +.|+
T Consensus        81 ~~~-~~~~~~~~~~~~~~~n~~g~~~~l~~~~~--~~~~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p~--------~~Y~  149 (321)
T d1rpna_          81 AQS-FVGASWNQPVTTGVVDGLGVTHLLEAIRQ--FSPETRFYQASTSEMFGLIQAERQDENTPFYPR--------SPYG  149 (321)
T ss_dssp             SCC-CHHHHTTSHHHHHHHHTHHHHHHHHHHHH--HCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCC--------SHHH
T ss_pred             ccc-cccccccchHHHHhhhhhchHHHHHHHHH--hCCCcccccccchhhcCcccCCCCCCCCCcccc--------ChhH
Confidence            763 22233345678899999999999999999  67665444444448888   5566777664321        2255


Q ss_pred             hhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc---cchHHHH-HHHhCC-CC---CCCCCccccccHHHHHHHH
Q 017977          202 RGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL---AKMIPLF-MMFAGG-PL---GSGQQWFSWIHLDDIVNLI  273 (363)
Q Consensus       202 ~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~---~~~~~~~-~~~~~~-~~---~~~~~~~~~i~v~D~a~a~  273 (363)
                      ++|...+.... .+....+++++++||+++|||..+..   ..+...+ +...++ +.   +++++.++|+|++|+|+++
T Consensus       150 ~sK~~~E~~~~-~~~~~~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~~~  228 (321)
T d1rpna_         150 VAKLYGHWITV-NYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAM  228 (321)
T ss_dssp             HHHHHHHHHHH-HHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHH
T ss_pred             HHHHHHHHHHH-HHHhhcCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHHHHH
Confidence            55644444333 33333489999999999999964321   2233333 333333 22   7889999999999999999


Q ss_pred             HHHhcCCCCCceEEeeCCCCcCHHHHHHHHHHHhCCCCC--CCCcHHHHHHHhccCceeeecCcccChhhHHH-cCCCcc
Q 017977          274 YEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSW--LPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFK  350 (363)
Q Consensus       274 ~~~~~~~~~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lG~~p~  350 (363)
                      +.+++++. .+.||+++++..++.++++.+.+.+|.+..  ........+  .++     ......|++|+++ |||+|+
T Consensus       229 ~~~~~~~~-~~~~ni~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~r--p~~-----~~~~~~d~~k~~k~lG~~P~  300 (321)
T d1rpna_         229 WLMLQQDK-ADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAFFR--PAE-----VDVLLGNPAKAQRVLGWKPR  300 (321)
T ss_dssp             HHHHHSSS-CCCEEECCSCEEEHHHHHHHHHHTTTCCGGGTEEECGGGCC--SSC-----CCBCCBCTHHHHHHHCCCCC
T ss_pred             HHHHhcCC-cCCceecccccceehhhhHHHHHHhCCCccceeecCCCCCC--CCc-----cCCccCCHHHHHHHHCCCcC
Confidence            99998765 578999999999999999999999997621  111110000  011     1234457899975 899999


Q ss_pred             cccHHHHHHHHhC
Q 017977          351 YRYVKDALKAIMS  363 (363)
Q Consensus       351 ~~~~~~~l~~~~~  363 (363)
                      ++ ++|+|+++++
T Consensus       301 ~~-l~e~i~~tv~  312 (321)
T d1rpna_         301 TS-LDELIRMMVE  312 (321)
T ss_dssp             SC-HHHHHHHHHH
T ss_pred             CC-HHHHHHHHHH
Confidence            97 9999999874

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.3e-36  Score=268.75  Aligned_cols=281  Identities=11%  Similarity=0.102  Sum_probs=206.5

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc--CCCEEEEccCCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGTP  127 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~Vi~~a~~~  127 (363)
                      ++||||||||||||++|+++|+++|+.|+++++..                .+|+.+.+.+.++++  ++|.|+|+|+..
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~----------------~~~~~~~~~~~~~~~~~~~d~v~~~a~~~   65 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD----------------ELNLLDSRAVHDFFASERIDQVYLAAAKV   65 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT----------------TCCTTCHHHHHHHHHHHCCSEEEECCCCC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch----------------hccccCHHHHHHHHhhcCCCEEEEcchhc
Confidence            46999999999999999999999999998765422                257888888887775  589999999875


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC---CcccccccCCCcchhhhhhhcccchhhH
Q 017977          128 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM---RAAHQEMITWLSDYCAKVYCLVSFNRGV  204 (363)
Q Consensus       128 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg---~~~~~e~~~~~~~~~~~~~~~~~y~~~k  204 (363)
                      ...........+.++.|+.++.+++++|.+  .++++|||+||. ++||   ..+++|+.+........   .+.|+.+|
T Consensus        66 ~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~--~~v~~~i~~SS~-~vyg~~~~~~~~E~~~~~~~~~~~---~~~Y~~sK  139 (315)
T d1e6ua_          66 GGIVANNTYPADFIYQNMMIESNIIHAAHQ--NDVNKLLFLGSS-CIYPKLAKQPMAESELLQGTLEPT---NEPYAIAK  139 (315)
T ss_dssp             CCHHHHHHCHHHHHHHHHHHHHHHHHHHHH--TTCCEEEEECCG-GGSCTTCCSSBCGGGTTSSCCCGG---GHHHHHHH
T ss_pred             cccccchhhHHHHHHHHHHHHHHHHHHHHH--cCCCEEEEECCc-eEcCCCCCCCccCCccccCCCCCC---CCHHHHHH
Confidence            332233445667789999999999999999  899999999999 8999   45677776543322211   23477778


Q ss_pred             HHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc---cchHHH-------HHHHhCCCC---CCCCCccccccHHHHHH
Q 017977          205 LVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL---AKMIPL-------FMMFAGGPL---GSGQQWFSWIHLDDIVN  271 (363)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~---~~~~~~-------~~~~~~~~~---~~~~~~~~~i~v~D~a~  271 (363)
                      ...++........ .|++++++||++||||++...   ..+...       .....+.++   +++.+.++++|++|+++
T Consensus       140 ~~~E~~~~~~~~~-~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~v~d~~~  218 (315)
T d1e6ua_         140 IAGIKLCESYNRQ-YGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAA  218 (315)
T ss_dssp             HHHHHHHHHHHHH-HCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHH
T ss_pred             HHHHHHHHHHHHH-hCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEEEEEEeehhHH
Confidence            6666555544433 499999999999999965321   111111       122334443   67888899999999999


Q ss_pred             HHHHHhcCCC---------CCceEEeeCCCCcCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhccCceeeecCcccChhhH
Q 017977          272 LIYEALSNPS---------YRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARA  342 (363)
Q Consensus       272 a~~~~~~~~~---------~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~  342 (363)
                      ++..++.+..         ..+.++++.+.+.+..++++.+.+.+|.+..+...         ...........++++|+
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~i~~~---------~~~~~~~~~~~~d~sk~  289 (315)
T d1e6ua_         219 ASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFD---------ASKPDGTPRKLLDVTRL  289 (315)
T ss_dssp             HHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSEEEEE---------TTSCCCCSBCCBCCHHH
T ss_pred             HHHHhhhhccccccccccccccccccCCCcchHHHHHHHHHHHHhCCCcceEEC---------CCCCCCCceeccCHHHH
Confidence            9999886543         34589999999999999999999999987322100         00000112234689999


Q ss_pred             HHcCCCcccccHHHHHHHHhC
Q 017977          343 KELGFPFKYRYVKDALKAIMS  363 (363)
Q Consensus       343 ~~lG~~p~~~~~~~~l~~~~~  363 (363)
                      ++|||+|+++ ++|+|+++++
T Consensus       290 k~Lg~~p~~~-l~e~i~~ti~  309 (315)
T d1e6ua_         290 HQLGWYHEIS-LEAGLASTYQ  309 (315)
T ss_dssp             HHTTCCCCCC-HHHHHHHHHH
T ss_pred             HHcCCCCCCC-HHHHHHHHHH
Confidence            9999999997 9999999874

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-36  Score=271.75  Aligned_cols=300  Identities=12%  Similarity=0.043  Sum_probs=207.6

Q ss_pred             cEE-EEecCcchHHHHHHHHHHhCCCEEEEEeCCCCccc-----ccCCC-----CCccccCcccccCcchHHhhcc--CC
Q 017977           51 MTV-SVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE-----LIFPG-----KKTRFFPGVMIAEEPQWRDCIQ--GS  117 (363)
Q Consensus        51 ~~v-lVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~~~~~-----~~~~~~~~~d~~~~~~~~~~~~--~~  117 (363)
                      +|| ||||||||||++|+++|+++||+|++++|..+...     .+...     .....+..+|+.|.+.+..++.  ++
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   80 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKP   80 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhccc
Confidence            478 99999999999999999999999999999765321     11111     0112245578999999998886  56


Q ss_pred             CEEEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhC-CCCCCCeEEEeccceecC---CcccccccCCCcchhhh
Q 017977          118 TAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLELVKPKYLM---RAAHQEMITWLSDYCAK  193 (363)
Q Consensus       118 d~Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~SS~~~~yg---~~~~~e~~~~~~~~~~~  193 (363)
                      ++|+|+++.. ............+++|+.++.+++++++++ ..+.+++||+||. ++||   ..+++|+++..+.    
T Consensus        81 ~~v~~~~a~~-~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~-~vyg~~~~~~~~E~~~~~P~----  154 (347)
T d1t2aa_          81 TEIYNLGAQS-HVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTS-ELYGKVQEIPQKETTPFYPR----  154 (347)
T ss_dssp             SEEEECCSCC-CHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEG-GGTCSCSSSSBCTTSCCCCC----
T ss_pred             ceeeeeeecc-ccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecch-heecCCCCCCCCCCCCCCCC----
Confidence            8999999863 223334556778899999999999999983 1223469999998 9999   5678888775331    


Q ss_pred             hhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc---cchHHHH--HHHhCCCC---CCCCCcccccc
Q 017977          194 VYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL---AKMIPLF--MMFAGGPL---GSGQQWFSWIH  265 (363)
Q Consensus       194 ~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~---~~~~~~~--~~~~~~~~---~~~~~~~~~i~  265 (363)
                          +-|+.+|...++........ .+++++++||+++|||.....   ..+...+  ......++   +++.+.++++|
T Consensus       155 ----~~Yg~sK~~aE~~~~~~~~~-~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i~  229 (347)
T d1t2aa_         155 ----SPYGAAKLYAYWIVVNFREA-YNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGH  229 (347)
T ss_dssp             ----SHHHHHHHHHHHHHHHHHHH-HCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEE
T ss_pred             ----CHHHHHHHHHHHHHHHHHHH-hCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceeeeeE
Confidence                12555565555544433333 489999999999999965332   1222222  22223333   78899999999


Q ss_pred             HHHHHHHHHHHhcCCCCCceEEeeCCCCcCHHHHHHHHHHHhCCCCCCCC-cHHHHHHH-hccCce----------eeec
Q 017977          266 LDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPV-PEFALKAV-LGEGAF----------VVLE  333 (363)
Q Consensus       266 v~D~a~a~~~~~~~~~~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~-~~~~~~~~-~~~~~~----------~~~~  333 (363)
                      ++|+|+++..++++.. .+.|++..+...++.+..+.+...+++...... +....... ......          ....
T Consensus       230 v~D~~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~  308 (347)
T d1t2aa_         230 AKDYVEAMWLMLQNDE-PEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVD  308 (347)
T ss_dssp             HHHHHHHHHHHHHSSS-CCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSCCC
T ss_pred             ecHHHHHHHHHhhcCC-CccceeccccccccchhhhhhhhhhcceeeecccchhhhhhhhhcCCceeeecccCCCCCCcC
Confidence            9999999999998765 468889988889999999999999998621111 10000000 000000          0011


Q ss_pred             CcccChhhHHH-cCCCcccccHHHHHHHHhC
Q 017977          334 GQRVVPARAKE-LGFPFKYRYVKDALKAIMS  363 (363)
Q Consensus       334 ~~~~~~~k~~~-lG~~p~~~~~~~~l~~~~~  363 (363)
                      ...+|++|+++ |||+|+++ |+|+|+++++
T Consensus       309 ~~~~d~skak~~Lgw~P~~s-l~e~i~~~I~  338 (347)
T d1t2aa_         309 FLQGDCTKAKQKLNWKPRVA-FDELVREMVH  338 (347)
T ss_dssp             BCCBCCHHHHHHHCCCCCSC-HHHHHHHHHH
T ss_pred             EeeECHHHHHHHHCCCcCCC-HHHHHHHHHH
Confidence            23458999975 89999997 9999999873

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=100.00  E-value=1.9e-35  Score=265.66  Aligned_cols=307  Identities=15%  Similarity=0.067  Sum_probs=209.7

Q ss_pred             CCCCCCCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccC------CCCCccccCcccccCcchHHhhccC
Q 017977           43 DHTQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF------PGKKTRFFPGVMIAEEPQWRDCIQG  116 (363)
Q Consensus        43 ~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~------~~~~~~~~~~~d~~~~~~~~~~~~~  116 (363)
                      ++...+.+++||||||+||||++|+++|+++||+|++++|+.++...+.      ...........|+.|.+.+.+++.+
T Consensus         4 ~~~~~~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   83 (342)
T d1y1pa1           4 DNAVLPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKG   83 (342)
T ss_dssp             TTCSSCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTT
T ss_pred             CCCCCCCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhccc
Confidence            4555666789999999999999999999999999999999875533221      1111111234689999999999999


Q ss_pred             CCEEEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC------CcccccccCCCcch
Q 017977          117 STAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM------RAAHQEMITWLSDY  190 (363)
Q Consensus       117 ~d~Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg------~~~~~e~~~~~~~~  190 (363)
                      +|+|+|+++....    ...+..++..|+.++.+++++|.+. .+++++||+||++.+++      ....+|+.+....+
T Consensus        84 ~~~v~~~a~~~~~----~~~~~~~~~~nv~gt~~ll~~~~~~-~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~  158 (342)
T d1y1pa1          84 AAGVAHIASVVSF----SNKYDEVVTPAIGGTLNALRAAAAT-PSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESI  158 (342)
T ss_dssp             CSEEEECCCCCSC----CSCHHHHHHHHHHHHHHHHHHHHTC-TTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHH
T ss_pred             chhhhhhcccccc----cccccccccchhhhHHHHHHhhhcc-cccccccccccceeeccCCCCCCCccccccccccccc
Confidence            9999999997422    2335677889999999999999983 46899999999853333      12233333221111


Q ss_pred             h--------hhhhhcccchhhHHHHHHHHHHHhcc-CCCceEEEEeeceEEeCCCCc--c-cchHHHH-HHHhCCCC--C
Q 017977          191 C--------AKVYCLVSFNRGVLVCREWEGTALKV-NKDVRLALIRIGIVLGKDGGA--L-AKMIPLF-MMFAGGPL--G  255 (363)
Q Consensus       191 ~--------~~~~~~~~y~~~k~~~~~~~~~~~~~-~~~~~~~ilRp~~v~g~~~~~--~-~~~~~~~-~~~~~~~~--~  255 (363)
                      .        ......+.|+.+|...+.......+. ..++.++++||+.+|||....  . ....... ...++...  .
T Consensus       159 ~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~g~~~~~~  238 (342)
T d1y1pa1         159 DKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPAL  238 (342)
T ss_dssp             HHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHH
T ss_pred             cccccccccCCCCCcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccccccchHHHHHHHHcCCcCccc
Confidence            1        01122345888886666554433332 237899999999999985321  1 1222222 33444433  3


Q ss_pred             CCCCccccccHHHHHHHHHHHhcCCCCCceEEeeCCCCcCHHHHHHHHHHHhCCC-CCCCCcHHHHHHHhccCceeeecC
Q 017977          256 SGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRP-SWLPVPEFALKAVLGEGAFVVLEG  334 (363)
Q Consensus       256 ~~~~~~~~i~v~D~a~a~~~~~~~~~~~g~~~i~~~~~~s~~el~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~  334 (363)
                      .+.+.++++|++|+|++++.+++++...|.|++++++.++++|+++.|.+.++.. .+...+.        ........+
T Consensus       239 ~~~~~~~~v~v~Dva~~~i~~l~~~~~~g~~~~~~~~~~t~~eia~~i~k~~p~~~~~~~~~~--------~~~~~~~~~  310 (342)
T d1y1pa1         239 ALMPPQYYVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSKTFPADFPD--------QGQDLSKFD  310 (342)
T ss_dssp             HTCCSEEEEEHHHHHHHHHHHHHCTTCCSCEEEECCEEECHHHHHHHHHHHCTTSCCCCCCCC--------CCCCCCEEC
T ss_pred             CCccceeeeeHHHHHHHHHHhhcCccccceEEEEcCCceEHHHHHHHHHHHcCCCcCCccCCc--------cCccccccc
Confidence            4556688999999999999999998888888999999999999999999998533 1111111        111111112


Q ss_pred             cccChhhHHHcCCCcccccHHHHHHHHhC
Q 017977          335 QRVVPARAKELGFPFKYRYVKDALKAIMS  363 (363)
Q Consensus       335 ~~~~~~k~~~lG~~p~~~~~~~~l~~~~~  363 (363)
                      ...++++++.|||.|.++ +||+|+++++
T Consensus       311 ~~~s~~~~k~lg~~~~~~-lee~i~d~I~  338 (342)
T d1y1pa1         311 TAPSLEILKSLGRPGWRS-IEESIKDLVG  338 (342)
T ss_dssp             CHHHHHHHHHTTCCSCCC-HHHHHHHHHC
T ss_pred             chHHHHHHHHcCCCCCcC-HHHHHHHHHH
Confidence            223355667899999887 9999999986

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.3e-36  Score=268.24  Aligned_cols=292  Identities=15%  Similarity=0.134  Sum_probs=203.2

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCC-----------CCCccccCcccccCcchHHhhccC--C
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP-----------GKKTRFFPGVMIAEEPQWRDCIQG--S  117 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----------~~~~~~~~~~d~~~~~~~~~~~~~--~  117 (363)
                      +||||||||||||++|+++|+++||+|++++|..........           ......+..+|+.|.+.+.+++.+  +
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~   82 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYSF   82 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCCE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeecccccccccccccccc
Confidence            589999999999999999999999999999863322111000           001112556899999999888764  5


Q ss_pred             CEEEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcc--cccccCCCcchhhhhh
Q 017977          118 TAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAA--HQEMITWLSDYCAKVY  195 (363)
Q Consensus       118 d~Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~--~~e~~~~~~~~~~~~~  195 (363)
                      ++|+|+|+.. ....+..++...++.|+.++.++++++.+  .++++++|+||+ .+|+...  ..+..... .     .
T Consensus        83 ~~i~h~Aa~~-~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~--~~v~~~i~~ss~-~~~~~~~~~~~~~~~~~-~-----~  152 (346)
T d1ek6a_          83 MAVIHFAGLK-AVGESVQKPLDYYRVNLTGTIQLLEIMKA--HGVKNLVFSSSA-TVYGNPQYLPLDEAHPT-G-----G  152 (346)
T ss_dssp             EEEEECCSCC-CHHHHHHCHHHHHHHHHHHHHHHHHHHHH--TTCCEEEEEEEG-GGGCSCSSSSBCTTSCC-C-----C
T ss_pred             cccccccccc-CcHhhHhCHHHHHHhhhcccccccchhhh--cCcccccccccc-eeeeccccccccccccc-c-----c
Confidence            6899999974 33344556778899999999999999999  899999999999 8888211  11111100 0     0


Q ss_pred             hcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCC---------cccchHHHH---HHHhCCC---------C
Q 017977          196 CLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGG---------ALAKMIPLF---MMFAGGP---------L  254 (363)
Q Consensus       196 ~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~---------~~~~~~~~~---~~~~~~~---------~  254 (363)
                      ..+-|+.+|+..+......+....+++.+++||+.+||+...         ....+++.+   ...++.+         .
T Consensus       153 ~~~~Y~~~k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~  232 (346)
T d1ek6a_         153 CTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDT  232 (346)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSS
T ss_pred             cCChHHHHHHHHHHHHHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCcccC
Confidence            112255556555555555555545999999999999998542         112334433   2222222         2


Q ss_pred             CCCCCccccccHHHHHHHHHHHhcCCC---CCceEEeeCCCCcCHHHHHHHHHHHhCCCCCCC-CcHHHHHHHhccCcee
Q 017977          255 GSGQQWFSWIHLDDIVNLIYEALSNPS---YRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLP-VPEFALKAVLGEGAFV  330 (363)
Q Consensus       255 ~~~~~~~~~i~v~D~a~a~~~~~~~~~---~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~~~-~~~~~~~~~~~~~~~~  330 (363)
                      ..+.+.++|+|++|+|.++..++....   ..++||+++++.+++.|+++.|.+.+|.+..+. .|.     ..++.   
T Consensus       233 ~~g~~~Rdfi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~~~~s~~dl~~~i~~~~~~~~~~~~~~~-----~~~e~---  304 (346)
T d1ek6a_         233 EDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVAR-----REGDV---  304 (346)
T ss_dssp             SSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCCCEEEECC-----CTTCC---
T ss_pred             CCCCeeEeEEEEEeccchhhhhccccccccCceEEEeCCCCcccHHHHHHHHHHHhCCCCCeEECCC-----CCCCC---
Confidence            467778999999999999988754322   345999999999999999999999999863321 110     01121   


Q ss_pred             eecCcccChhhHHH-cCCCcccccHHHHHHHHhC
Q 017977          331 VLEGQRVVPARAKE-LGFPFKYRYVKDALKAIMS  363 (363)
Q Consensus       331 ~~~~~~~~~~k~~~-lG~~p~~~~~~~~l~~~~~  363 (363)
                        .....+++|+++ |||+|+++ ++|+|+++++
T Consensus       305 --~~~~~d~~k~~~~lgw~p~~s-lee~I~~~i~  335 (346)
T d1ek6a_         305 --AACYANPSLAQEELGWTAALG-LDRMCEDLWR  335 (346)
T ss_dssp             --SEECBCCHHHHHTTCCCCCCC-HHHHHHHHHH
T ss_pred             --CEeeECHHHHHHHHCCCcCCC-HHHHHHHHHH
Confidence              123457899975 89999997 9999999874

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2.6e-35  Score=265.33  Aligned_cols=291  Identities=17%  Similarity=0.143  Sum_probs=206.3

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccc----c-CCCCCccccCcccccCcchHHhhcc--CCCEEEEc
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL----I-FPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNL  123 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~-~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~Vi~~  123 (363)
                      |.|||||||||||++|+++|+++|++|+++++.......    . ........+..+|+.|.+.+..++.  ++|+|||+
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vihl   81 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHF   81 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEEC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhccCCCEEEEc
Confidence            469999999999999999999999999999875432111    0 0001111255689999999988876  78999999


Q ss_pred             cCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC-------CcccccccCCCcchhhhhhh
Q 017977          124 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM-------RAAHQEMITWLSDYCAKVYC  196 (363)
Q Consensus       124 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg-------~~~~~e~~~~~~~~~~~~~~  196 (363)
                      |+.. ........+..+..+|+.++.+++++|++  .+++++|++||. .+||       ..+++|+.+..+        
T Consensus        82 Aa~~-~~~~~~~~~~~~~~~N~~~t~~ll~~~~~--~~i~~~i~~SS~-~vyg~~~~~~~~~~~~e~~~~~p--------  149 (347)
T d1z45a2          82 AGLK-AVGESTQIPLRYYHNNILGTVVLLELMQQ--YNVSKFVFSSSA-TVYGDATRFPNMIPIPEECPLGP--------  149 (347)
T ss_dssp             CSCC-CHHHHHHSHHHHHHHHHHHHHHHHHHHHH--HTCCEEEEEEEG-GGGCCGGGSTTCCSBCTTSCCCC--------
T ss_pred             cccc-cccccccCcccccccchhhhHHHHHHHHh--cccceEEeecce-eeecCcccCCCCCccccccCCCC--------
Confidence            9974 32334556678899999999999999999  899999999999 8998       123445444222        


Q ss_pred             cccchhhHHHHHHHHHHHhcc-CCCceEEEEeeceEEeCCCC---------cccchHHHH-HHH--hCCCC---------
Q 017977          197 LVSFNRGVLVCREWEGTALKV-NKDVRLALIRIGIVLGKDGG---------ALAKMIPLF-MMF--AGGPL---------  254 (363)
Q Consensus       197 ~~~y~~~k~~~~~~~~~~~~~-~~~~~~~ilRp~~v~g~~~~---------~~~~~~~~~-~~~--~~~~~---------  254 (363)
                      .+.|+.+|+.++......... ..+++++++||+++||+...         ....+++.+ ...  .++++         
T Consensus       150 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~  229 (347)
T d1z45a2         150 TNPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDS  229 (347)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------
T ss_pred             CChhHhHHHHHHHHHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCccc
Confidence            123666676666665555443 34899999999999997431         123344444 222  23333         


Q ss_pred             CCCCCccccccHHHHHHHHHHHhcCC------C-CCceEEeeCCCCcCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhccC
Q 017977          255 GSGQQWFSWIHLDDIVNLIYEALSNP------S-YRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEG  327 (363)
Q Consensus       255 ~~~~~~~~~i~v~D~a~a~~~~~~~~------~-~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~  327 (363)
                      .++...++++++.|.+.+++.+++..      . ..++||+++++++++.|+++.+.+.+|.+.........    .++.
T Consensus       230 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~----~~~~  305 (347)
T d1z45a2         230 RDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYKVTGRR----AGDV  305 (347)
T ss_dssp             CCSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCCC-------------C
T ss_pred             cCCceeeeeeeeecccccccccccccccccccccccccceecCCCcccHHHHHHHHHHHHCCCCceEeCCCC----CCCC
Confidence            23456778999999999988877531      1 34599999999999999999999999987433221110    1111


Q ss_pred             ceeeecCcccChhhHHH-cCCCcccccHHHHHHHHhC
Q 017977          328 AFVVLEGQRVVPARAKE-LGFPFKYRYVKDALKAIMS  363 (363)
Q Consensus       328 ~~~~~~~~~~~~~k~~~-lG~~p~~~~~~~~l~~~~~  363 (363)
                           .....+++|+++ |||+|+++ ++|+|+++++
T Consensus       306 -----~~~~~d~sk~~~~lGw~p~~~-lee~i~~ti~  336 (347)
T d1z45a2         306 -----LNLTAKPDRAKRELKWQTELQ-VEDSCKDLWK  336 (347)
T ss_dssp             -----CCCCBCCHHHHHHTCCCCCCC-HHHHHHHHHH
T ss_pred             -----CEeeECHHHHHHHHCCCCCCC-HHHHHHHHHH
Confidence                 234567899975 99999997 9999999874

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.8e-35  Score=265.55  Aligned_cols=295  Identities=15%  Similarity=0.040  Sum_probs=200.0

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcc-----cccCCC-----CCccccCcccccCcchHHhhcc--CCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-----ELIFPG-----KKTRFFPGVMIAEEPQWRDCIQ--GST  118 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~--~~d  118 (363)
                      +++||||||||||++|+++|+++||+|++++|..+..     ..+...     .....+...|+.+.+.+...++  ++|
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~D   81 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPD   81 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhccc
Confidence            6899999999999999999999999999999965421     111110     0111133468888888888775  679


Q ss_pred             EEEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhC---CCCCCCeEEEeccceecC--CcccccccCCCcchhhh
Q 017977          119 AVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES---PEGVRPSVLELVKPKYLM--RAAHQEMITWLSDYCAK  193 (363)
Q Consensus       119 ~Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~~v~~SS~~~~yg--~~~~~e~~~~~~~~~~~  193 (363)
                      +|||+|+.. ......+++...++.|+.++.+++++++..   .....++++.||. .+|+  ..+++|+.+..+     
T Consensus        82 ~Vih~Aa~~-~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~-~~~~~~~~~~~E~~~~~p-----  154 (339)
T d1n7ha_          82 EVYNLAAQS-HVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSS-EMFGSTPPPQSETTPFHP-----  154 (339)
T ss_dssp             EEEECCSCC-CHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEG-GGGTTSCSSBCTTSCCCC-----
T ss_pred             hhhhccccc-cccccccCccccccccccccchhhhhhhhcccccccceeeeecccc-eecccCCCCCCCCCCCCC-----
Confidence            999999974 222234567788999999999999998752   0123335555555 6777  566778776432     


Q ss_pred             hhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc---cchHHHH-HHHhCC-CC---CCCCCcccccc
Q 017977          194 VYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL---AKMIPLF-MMFAGG-PL---GSGQQWFSWIH  265 (363)
Q Consensus       194 ~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~---~~~~~~~-~~~~~~-~~---~~~~~~~~~i~  265 (363)
                         .+.|+.+|..++.+...... .++++++++||++||||..+..   ..+.... ....+. +.   +++.+.++++|
T Consensus       155 ---~~~Y~~sK~~~E~~~~~~~~-~~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~~~  230 (339)
T d1n7ha_         155 ---RSPYAASKCAAHWYTVNYRE-AYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGF  230 (339)
T ss_dssp             ---CSHHHHHHHHHHHHHHHHHH-HHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEE
T ss_pred             ---cchhhHHHHHHHHHHHHHHH-HhCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCcccccee
Confidence               12355556455444444333 3489999999999999965321   1222222 222332 22   78899999999


Q ss_pred             HHHHHHHHHHHhcCCCCCceEEeeCCCCcCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhccCceeeecCcccChhhHHH-
Q 017977          266 LDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-  344 (363)
Q Consensus       266 v~D~a~a~~~~~~~~~~~g~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-  344 (363)
                      ++|+|+++..+++++.. +.+++..+...+..++++.+.+.+|......+...     ..............|++|+++ 
T Consensus       231 v~D~a~~~~~~~~~~~~-~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~-----~~~~r~~~~~~~~~d~~Kak~~  304 (339)
T d1n7ha_         231 AGDYVEAMWLMLQQEKP-DDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEID-----QRYFRPAEVDNLQGDASKAKEV  304 (339)
T ss_dssp             HHHHHHHHHHHHTSSSC-CEEEECCSCEEEHHHHHHHHHHHTTCCGGGTEEEC-----GGGSCSSCCCBCCBCCHHHHHH
T ss_pred             eehHHHHHHHHHhcCCC-CccccccccccccchhhhhhhhhhhcccCceeeec-----cCCCCCCCCCeeeECHHHHHHH
Confidence            99999999999988753 46666777889999999999999997622110000     000000011233457899965 


Q ss_pred             cCCCcccccHHHHHHHHhC
Q 017977          345 LGFPFKYRYVKDALKAIMS  363 (363)
Q Consensus       345 lG~~p~~~~~~~~l~~~~~  363 (363)
                      |||+|+++ ++|+|+++++
T Consensus       305 LGw~P~~~-le~gi~~ti~  322 (339)
T d1n7ha_         305 LGWKPQVG-FEKLVKMMVD  322 (339)
T ss_dssp             HCCCCCSC-HHHHHHHHHH
T ss_pred             HCCCcCCC-HHHHHHHHHH
Confidence            89999997 9999999874

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.1e-35  Score=272.29  Aligned_cols=305  Identities=14%  Similarity=0.091  Sum_probs=200.1

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCC-------------Ccccc----c----CCCCCccccCcccccCcc
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR-------------SKAEL----I----FPGKKTRFFPGVMIAEEP  108 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~-------------~~~~~----~----~~~~~~~~~~~~d~~~~~  108 (363)
                      +|||||||||||||++|+++|++.||+|++++...             .+...    +    ........+..+|+.|.+
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~   80 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE   80 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHH
Confidence            48999999999999999999999999999997211             00000    0    000011125567999999


Q ss_pred             hHHhhccC--CCEEEEccCCCCC--CCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC--Cccccc
Q 017977          109 QWRDCIQG--STAVVNLAGTPIG--TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM--RAAHQE  182 (363)
Q Consensus       109 ~~~~~~~~--~d~Vi~~a~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg--~~~~~e  182 (363)
                      .+.+++++  +|+|||+|+....  .......+..++++|+.++.+++++|.+  .+.+++++.+|+..+|+  ..+..|
T Consensus        81 ~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~--~~~~~~~i~~ss~~~~~~~~~~~~~  158 (393)
T d1i24a_          81 FLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKE--FGEECHLVKLGTMGEYGTPNIDIEE  158 (393)
T ss_dssp             HHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHH--HCTTCEEEEECCGGGGCCCSSCBCS
T ss_pred             HHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHH--hccccceeecccccccccccccccc
Confidence            99999874  6999999987433  1234455677899999999999999999  66665554454447777  222222


Q ss_pred             ccCCCc------chhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc----------------c
Q 017977          183 MITWLS------DYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL----------------A  240 (363)
Q Consensus       183 ~~~~~~------~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~----------------~  240 (363)
                      ......      .........+.|+.+|+..+...... ....+++++++||+++||+.....                .
T Consensus       159 ~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~-~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~  237 (393)
T d1i24a_         159 GYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFT-CKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFG  237 (393)
T ss_dssp             SEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHH-HHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTC
T ss_pred             ccccccccccccccccccccccHHHHHhhhhccccccc-ccccceeeeecccccccCCCccccccccccccccccccccc
Confidence            211100      00000111233666675555555443 333499999999999999864321                1


Q ss_pred             chHHHH--HHHhCCCC---CCCCCccccccHHHHHHHHHHHhcCCCCCceEEe--eCCCCcCHHHHHHHHHHHhCCCC-C
Q 017977          241 KMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSNPSYRGVING--TAPNPVRLAEMCDHLGNVLGRPS-W  312 (363)
Q Consensus       241 ~~~~~~--~~~~~~~~---~~~~~~~~~i~v~D~a~a~~~~~~~~~~~g~~~i--~~~~~~s~~el~~~i~~~~g~~~-~  312 (363)
                      .++..+  +...++++   +++.+.++|+|++|+|++++.++++....|.+++  .+++.+++.|+++.+.+..+... .
T Consensus       238 ~~i~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~~~~~~g~~~~~~~~~~~~si~el~~~i~~~~~~~~~~  317 (393)
T d1i24a_         238 TALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNELASLVTKAGSKLGLD  317 (393)
T ss_dssp             CHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECSEEEEHHHHHHHHHHHHHTTTCC
T ss_pred             cchhhhhHHhhcCCeeEEeeecccccccccccchHHHHHHHHHhhcccceeeeecCCCCeeEHHHHHHHHHHHHHhhCCC
Confidence            233333  55666665   7889999999999999999999998877776555  44567899999999998865321 1


Q ss_pred             CCCcHHHHHHHhccCceeeecCcccChhhHHHcCCCcccccHHHHHHHHhC
Q 017977          313 LPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIMS  363 (363)
Q Consensus       313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~p~~~~~~~~l~~~~~  363 (363)
                      +....     ...............+++|+++|||+|+++ ++++++++++
T Consensus       318 ~~~~~-----~~~~~~~~~~~~~~~d~~k~~~LGw~P~~~-~~~~i~~~~~  362 (393)
T d1i24a_         318 VKKMT-----VPNPRVEAEEHYYNAKHTKLMELGLEPHYL-SDSLLDSLLN  362 (393)
T ss_dssp             CCEEE-----ECCSSCSCSSCCCCBCCCHHHHTTCCCCCC-CHHHHHHHHH
T ss_pred             cceee-----ccCCCCCCCccEecCCHHHHHHcCCccccC-HHHHHHHHHH
Confidence            11000     000000001112335688888899999997 9999998863

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=100.00  E-value=1.7e-34  Score=263.43  Aligned_cols=289  Identities=14%  Similarity=0.114  Sum_probs=195.8

Q ss_pred             ccEEEEecCcchHHHHHHHHHHh-CCCEEEEEeCCCCc---ccc------------------cCCCCCccccCcccccCc
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQA-DNHQVRVLTRSRSK---AEL------------------IFPGKKTRFFPGVMIAEE  107 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~---~~~------------------~~~~~~~~~~~~~d~~~~  107 (363)
                      .|||||||||||||++|+++|++ .||+|+++++-...   ...                  .........+..+|+.|.
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~   81 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence            47999999999999999999986 78999999852111   000                  000001112345799999


Q ss_pred             chHHhhcc---CCCEEEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC--------
Q 017977          108 PQWRDCIQ---GSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM--------  176 (363)
Q Consensus       108 ~~~~~~~~---~~d~Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg--------  176 (363)
                      +.+.++++   ++|+|||+|+... ...........++.|+.++.++++++.+  .+++++++.||+ .+|+        
T Consensus        82 ~~l~~~~~~~~~~d~ViH~Aa~~~-~~~~~~~~~~~~~~N~~~t~~~l~~~~~--~~~~~~~~~~s~-~~~~~~~~~~~~  157 (383)
T d1gy8a_          82 DFLNGVFTRHGPIDAVVHMCAFLA-VGESVRDPLKYYDNNVVGILRLLQAMLL--HKCDKIIFSSSA-AIFGNPTMGSVS  157 (383)
T ss_dssp             HHHHHHHHHSCCCCEEEECCCCCC-HHHHHHCHHHHHHHHHHHHHHHHHHHHH--TTCCEEEEEEEG-GGTBSCCC----
T ss_pred             HHhhhhhhccceeehhhccccccc-ccccccccccccccccccccccchhhhc--cCCccccccccc-cccccccccccc
Confidence            88888775   6799999999742 2333445667889999999999999999  899999999988 6676        


Q ss_pred             --CcccccccCCCcchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc--------cchHHHH
Q 017977          177 --RAAHQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL--------AKMIPLF  246 (363)
Q Consensus       177 --~~~~~e~~~~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~--------~~~~~~~  246 (363)
                        ..++.|+.+..+        .+-|+.+|+..+..... +...+|++++++||+++|||.+...        ..+++.+
T Consensus       158 ~~~~~~~e~~~~~p--------~~~Y~~sK~~~e~~~~~-~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~i  228 (383)
T d1gy8a_         158 TNAEPIDINAKKSP--------ESPYGESKLIAERMIRD-CAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPII  228 (383)
T ss_dssp             -CCCCBCTTSCCBC--------SSHHHHHHHHHHHHHHH-HHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHH
T ss_pred             ccccccccccCCCC--------CCHHHhhHhHHHHHHHH-HHHHhCCCEEEEecceeeccCccccccccccccchhHHHH
Confidence              112333333211        12355556444444333 3333499999999999999975321        1222222


Q ss_pred             --HHH----------------hCCC---------CCCCCCccccccHHHHHHHHHHHhcCC---------CCCceEEeeC
Q 017977          247 --MMF----------------AGGP---------LGSGQQWFSWIHLDDIVNLIYEALSNP---------SYRGVINGTA  290 (363)
Q Consensus       247 --~~~----------------~~~~---------~~~~~~~~~~i~v~D~a~a~~~~~~~~---------~~~g~~~i~~  290 (363)
                        +..                .+.+         .++|.+.++|+|++|+|++++.+++..         ...++||+++
T Consensus       229 i~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~s  308 (383)
T d1gy8a_         229 LGRVMSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGT  308 (383)
T ss_dssp             HHHHHHHHSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESC
T ss_pred             HHHHHhhccccccchhhhhhhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhhccccccccccCccEEEeCC
Confidence              110                1111         145788899999999999999988631         1235999999


Q ss_pred             CCCcCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhccCceeeecCcccChhhHHH-cCCCcccccHHHHHHHH
Q 017977          291 PNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYRYVKDALKAI  361 (363)
Q Consensus       291 ~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lG~~p~~~~~~~~l~~~  361 (363)
                      ++++++.|+++.+.+.+|.+..+.....    ..++.     .....|++|+++ |||+|+++ ++|+|+++
T Consensus       309 ~~~~s~~el~~~i~~~~~~~~~~~~~~~----~~~d~-----~~~~~d~~k~~k~LGw~P~~~-l~e~i~~t  370 (383)
T d1gy8a_         309 SRGYSVREVIEVARKTTGHPIPVRECGR----REGDP-----AYLVAASDKAREVLGWKPKYD-TLEAIMET  370 (383)
T ss_dssp             SCCEEHHHHHHHHHHHHCCCCCEEEECC----CTTCC-----SEECBCCHHHHHHTCCCCSCC-SHHHHHHH
T ss_pred             CCceeHHHHHHHHHHHhCCCCceEECCC----CCCCc-----CEeeeCHHHHHHHHCCccCCC-HHHHHHHH
Confidence            9999999999999999998733211000    01111     123347899975 99999997 99999875

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=100.00  E-value=9e-34  Score=254.13  Aligned_cols=296  Identities=15%  Similarity=0.112  Sum_probs=201.1

Q ss_pred             EEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcc--c---ccCCCCCccccCcccccCcchHHhhccC--CCEEEEcc
Q 017977           52 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA--E---LIFPGKKTRFFPGVMIAEEPQWRDCIQG--STAVVNLA  124 (363)
Q Consensus        52 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~---~~~~~~~~~~~~~~d~~~~~~~~~~~~~--~d~Vi~~a  124 (363)
                      ||||||||||||++|+++|+++||+|+++++-....  .   .+.. .....+..+|+.|.+.+.+++++  +|+|||+|
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~-~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~a   80 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS-LGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLA   80 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT-TCCCEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhc-cCCcEEEEcccCCHHHHHHHHHhcCCceEEeec
Confidence            799999999999999999999999999997533221  1   1111 11122556899999999999875  59999999


Q ss_pred             CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC---CcccccccC-------CCcchhhhh
Q 017977          125 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM---RAAHQEMIT-------WLSDYCAKV  194 (363)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg---~~~~~e~~~-------~~~~~~~~~  194 (363)
                      +.. .......++...+++|+.|+.+|++++.+  .+++++|+.||++.+++   ..+..+...       +...+..++
T Consensus        81 a~~-~~~~~~~~~~~~~~~Nv~gt~nll~~~~~--~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (338)
T d1orra_          81 GQV-AMTTSIDNPCMDFEINVGGTLNLLEAVRQ--YNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQ  157 (338)
T ss_dssp             CCC-CHHHHHHCHHHHHHHHHHHHHHHHHHHHH--HCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSC
T ss_pred             ccc-cccccccChHHHHHHHHHHHHHHHHhhhc--ccccccccccccccccccccccccccccccccccccccCcccCCc
Confidence            974 22233446688999999999999999999  78888888888755555   111111111       111111111


Q ss_pred             -hhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCc--ccchHHHH-----HHH--hCCCC---CCCCCcc
Q 017977          195 -YCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA--LAKMIPLF-----MMF--AGGPL---GSGQQWF  261 (363)
Q Consensus       195 -~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~--~~~~~~~~-----~~~--~~~~~---~~~~~~~  261 (363)
                       ...+.|+..|+..+......... ++....++|++.+|++....  ....++.+     ...  .++++   +++.+.+
T Consensus       158 ~~~~~~y~~~k~~~e~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r  236 (338)
T d1orra_         158 LDFHSPYGCSKGAADQYMLDYARI-FGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVR  236 (338)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHH-HCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEE
T ss_pred             cccccccccccchhhhhhhhhhhc-cCcccccccccceeeccccccccccccchhhHHHHHHHhccCCceEEeCCCceeE
Confidence             12344555565444444444443 38999999999999875421  12222222     111  24443   7888999


Q ss_pred             ccccHHHHHHHHHHHhcCCC--CCceEEeeC--CCCcCHHHHHHHHHHHhCCCCCCC-CcHHHHHHHhccCceeeecCcc
Q 017977          262 SWIHLDDIVNLIYEALSNPS--YRGVINGTA--PNPVRLAEMCDHLGNVLGRPSWLP-VPEFALKAVLGEGAFVVLEGQR  336 (363)
Q Consensus       262 ~~i~v~D~a~a~~~~~~~~~--~~g~~~i~~--~~~~s~~el~~~i~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  336 (363)
                      +++|++|+|++++.++++..  .+++|++..  +..+++.|+++.+.+..|.+..+. .+..     .++     .....
T Consensus       237 ~~~~v~D~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~-----~~~-----~~~~~  306 (338)
T d1orra_         237 DVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLPVR-----ESD-----QRVFV  306 (338)
T ss_dssp             ECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEEEECCC-----SSC-----CSEEC
T ss_pred             eeecccchhhHHHHHHhccccccCccccccccccccccHHHHHHHHHHHHCCCceeEeCCCC-----CCC-----cCeee
Confidence            99999999999999997754  345889854  466899999999999999763321 1100     011     12234


Q ss_pred             cChhhHHH-cCCCcccccHHHHHHHHhC
Q 017977          337 VVPARAKE-LGFPFKYRYVKDALKAIMS  363 (363)
Q Consensus       337 ~~~~k~~~-lG~~p~~~~~~~~l~~~~~  363 (363)
                      .|++|+++ |||+|+++ ++|+|+++++
T Consensus       307 ~d~~k~~~~Lg~~p~~s-l~e~i~~ti~  333 (338)
T d1orra_         307 ADIKKITNAIDWSPKVS-AKDGVQKMYD  333 (338)
T ss_dssp             BCCHHHHHHHCCCCCSC-HHHHHHHHHH
T ss_pred             ECHHHHHHHHCCCcCCC-HHHHHHHHHH
Confidence            57999975 99999997 9999999874

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=100.00  E-value=9.6e-34  Score=247.44  Aligned_cols=268  Identities=13%  Similarity=0.072  Sum_probs=194.3

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc--CCCEEEEccCCCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGTPI  128 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~Vi~~a~~~~  128 (363)
                      |||||||||||||++|+++|.++||+|++++|+.                 +|+.|.+++.++++  ++|+|||+|+.. 
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~-----------------~D~~d~~~~~~~l~~~~~d~vih~a~~~-   63 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQD-----------------LDITNVLAVNKFFNEKKPNVVINCAAHT-   63 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT-----------------CCTTCHHHHHHHHHHHCCSEEEECCCCC-
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh-----------------ccCCCHHHHHHHHHHcCCCEEEeecccc-
Confidence            7999999999999999999999999999998853                 57888888888887  579999999873 


Q ss_pred             CCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC---CcccccccCCCcchhhhhhhcccchhhHH
Q 017977          129 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM---RAAHQEMITWLSDYCAKVYCLVSFNRGVL  205 (363)
Q Consensus       129 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg---~~~~~e~~~~~~~~~~~~~~~~~y~~~k~  205 (363)
                      ........+......|+....++.+++..  . ...+++.||. .+|+   ..+..|.+++.+...        |..+|+
T Consensus        64 ~~~~~~~~~~~~~~~n~~~~~~~~~~~~~--~-~~~~~~~ss~-~v~~~~~~~~~~e~~~~~~~~~--------~~~~k~  131 (281)
T d1vl0a_          64 AVDKCEEQYDLAYKINAIGPKNLAAAAYS--V-GAEIVQISTD-YVFDGEAKEPITEFDEVNPQSA--------YGKTKL  131 (281)
T ss_dssp             CHHHHHHCHHHHHHHHTHHHHHHHHHHHH--H-TCEEEEEEEG-GGSCSCCSSCBCTTSCCCCCSH--------HHHHHH
T ss_pred             ccccccccchhhccccccccccccccccc--c-cccccccccc-eeeeccccccccccccccchhh--------hhhhhh
Confidence            32334455677888999999999998888  3 4457777777 7777   456677666443221        222222


Q ss_pred             HHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCC-CCCCCccccccHHHHHHHHHHHhcCCCCCc
Q 017977          206 VCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPL-GSGQQWFSWIHLDDIVNLIYEALSNPSYRG  284 (363)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~D~a~a~~~~~~~~~~~g  284 (363)
                         ..+...  ...+.+++++||+++||++.+....++.  ....+.++ ..+++.++++|++|+|+++..++++.. .|
T Consensus       132 ---~~e~~~--~~~~~~~~i~R~~~vyG~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~~-~g  203 (281)
T d1vl0a_         132 ---EGENFV--KALNPKYYIVRTAWLYGDGNNFVKTMIN--LGKTHDELKVVHDQVGTPTSTVDLARVVLKVIDEKN-YG  203 (281)
T ss_dssp             ---HHHHHH--HHHCSSEEEEEECSEESSSSCHHHHHHH--HHHHCSEEEEESSCEECCEEHHHHHHHHHHHHHHTC-CE
T ss_pred             ---HHHHHH--HHhCCCccccceeEEeCCCcccccchhh--hhccCCceeecCCceeccchhhhhhhhhhhhhhhcc-cC
Confidence               222222  2237899999999999998654333322  22333333 445688999999999999999998765 57


Q ss_pred             eEEeeCCCCcCHHHHHHHHHHHhCCCCCC-CCcHHHHHHHhccCceeeecCcccChhhHHH-cCCCcccccHHHHHHHHh
Q 017977          285 VINGTAPNPVRLAEMCDHLGNVLGRPSWL-PVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYRYVKDALKAIM  362 (363)
Q Consensus       285 ~~~i~~~~~~s~~el~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lG~~p~~~~~~~~l~~~~  362 (363)
                      +||+++++.+|+.|+++.+.+.+|++..+ +++...    ++..... .....++++|+++ +||+|+  +|+++|++++
T Consensus       204 ~~~~~~~~~~s~~e~~~~i~~~~g~~~~i~~i~~~~----~~~~a~r-p~~~~ld~~k~~~~~g~~~~--~~~~~l~~~l  276 (281)
T d1vl0a_         204 TFHCTCKGICSWYDFAVEIFRLTGIDVKVTPCTTEE----FPRPAKR-PKYSVLRNYMLELTTGDITR--EWKESLKEYI  276 (281)
T ss_dssp             EEECCCBSCEEHHHHHHHHHHHHCCCCEEEEECSTT----SCCSSCC-CSBCCBCCHHHHHTTCCCCC--BHHHHHHHHH
T ss_pred             ceeEeCCCccchHHHHHHHHHHhCCCceEEeccHHH----cCCcCCC-ccccccCHHHHHHHhCCCCC--CHHHHHHHHH
Confidence            99999999999999999999999987432 222110    1111110 0123468999975 899998  4999999987


Q ss_pred             C
Q 017977          363 S  363 (363)
Q Consensus       363 ~  363 (363)
                      +
T Consensus       277 ~  277 (281)
T d1vl0a_         277 D  277 (281)
T ss_dssp             H
T ss_pred             H
Confidence            4

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=100.00  E-value=3.2e-32  Score=245.85  Aligned_cols=295  Identities=17%  Similarity=0.170  Sum_probs=199.3

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccC---CCCCccccCcccccCcchHHhhcc--CCCEEEEcc
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF---PGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLA  124 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~d~~~~~~~~~~~~--~~d~Vi~~a  124 (363)
                      .|||||||||||||++|+++|+++||+|++++|+..+...+.   .......+..+|+.|.+.+.++++  .+|+|+|+|
T Consensus         8 ~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~~~a   87 (356)
T d1rkxa_           8 GKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHMA   87 (356)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhchhhhhhhhh
Confidence            479999999999999999999999999999999886644321   111122355679999999988876  569999999


Q ss_pred             CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC----CcccccccC--CCcchhhhhhhcc
Q 017977          125 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM----RAAHQEMIT--WLSDYCAKVYCLV  198 (363)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg----~~~~~e~~~--~~~~~~~~~~~~~  198 (363)
                      +.... ..+...+...+.+|+.++.++++++.+  .+.+++++.+|++.+++    ..+..|+.+  +...|...|.   
T Consensus        88 a~~~~-~~~~~~~~~~~~~Nv~g~~n~l~~~~~--~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~y~~~k~---  161 (356)
T d1rkxa_          88 AQPLV-RLSYSEPVETYSTNVMGTVYLLEAIRH--VGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKG---  161 (356)
T ss_dssp             SCCCH-HHHHHCHHHHHHHHTHHHHHHHHHHHH--HCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHH---
T ss_pred             ccccc-cccccCCccccccccccchhhhhhhhc--cccccccccccccccccccccccccccccccCCCCccccccc---
Confidence            97422 223456788999999999999999998  55555555555544443    234444433  2334544421   


Q ss_pred             cchhhHHHHHHHHHHHhc----cCCCceEEEEeeceEEeCCCCcccchHHHH-HHHhC-CCC--CCCCCccccccHHHHH
Q 017977          199 SFNRGVLVCREWEGTALK----VNKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAG-GPL--GSGQQWFSWIHLDDIV  270 (363)
Q Consensus       199 ~y~~~k~~~~~~~~~~~~----~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~-~~~--~~~~~~~~~i~v~D~a  270 (363)
                         ..++...........    ...++.++++||+++|||++.....+++.+ ....+ .++  +.+.+.++++|++|+|
T Consensus       162 ---~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~  238 (356)
T d1rkxa_         162 ---CAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPL  238 (356)
T ss_dssp             ---HHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCEETHHHH
T ss_pred             ---cchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHHHhCCCceEEeecccccccccccccc
Confidence               111111122211111    123789999999999999875555565544 33333 332  7888899999999999


Q ss_pred             HHHHHHhcCCCC-----Cc--eEEeeCCCCcCHHHHHHHHHHHhCCCCCCCCcHHHHHHHhccCceeeecCcccChhhHH
Q 017977          271 NLIYEALSNPSY-----RG--VINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAK  343 (363)
Q Consensus       271 ~a~~~~~~~~~~-----~g--~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~  343 (363)
                      +++..++.+...     ..  .++...+..+++.++++.+.+.++....+......-   ..+     .....+|++|++
T Consensus       239 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---~~~-----~~~~~~d~skak  310 (356)
T d1rkxa_         239 SGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLDGNAH---PHE-----AHYLKLDCSKAK  310 (356)
T ss_dssp             HHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC----------C-----CCCCCBCCHHHH
T ss_pred             chhhhhhhhhcccccccccccccccccccccccchhhhhhHHHhCCCccEEEcCCCC---CCC-----cCeeeEcHHHHH
Confidence            999988875431     12  233334567899999999999999874333222110   111     123456789997


Q ss_pred             H-cCCCcccccHHHHHHHHh
Q 017977          344 E-LGFPFKYRYVKDALKAIM  362 (363)
Q Consensus       344 ~-lG~~p~~~~~~~~l~~~~  362 (363)
                      + |||+|+++ ++++|++++
T Consensus       311 ~~LGw~P~~~-l~egi~~ti  329 (356)
T d1rkxa_         311 MQLGWHPRWN-LNTTLEYIV  329 (356)
T ss_dssp             HHHCCCCCCC-HHHHHHHHH
T ss_pred             HHHCCCcCCC-HHHHHHHHH
Confidence            5 99999997 999999986

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=2.8e-30  Score=227.89  Aligned_cols=280  Identities=12%  Similarity=0.095  Sum_probs=172.3

Q ss_pred             EEEecCcchHHHHHHHHHHhCCC-EEEEEeCCCCcccccCCCCCccccCcccccCcchHH------hhccCCCEEEEccC
Q 017977           53 VSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWR------DCIQGSTAVVNLAG  125 (363)
Q Consensus        53 vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~------~~~~~~d~Vi~~a~  125 (363)
                      |||||||||||++|+++|+++|+ +|+++++-...........    ....|..+.+.+.      ..+..+++|+|+|+
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~aa   77 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVD----LNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGA   77 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHHT----SCCSEEEEHHHHHHHHHTTCCCSSCCEEEECCS
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhcccc----cchhhhccchHHHHHHhhhhcccchhhhhhhcc
Confidence            89999999999999999999995 7988875433221110000    1123333333222      22346899999998


Q ss_pred             CCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC--Cccccccc--CCCcchhhhhhhcccch
Q 017977          126 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM--RAAHQEMI--TWLSDYCAKVYCLVSFN  201 (363)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg--~~~~~e~~--~~~~~~~~~~~~~~~y~  201 (363)
                      ....   .........+.|+.++.++++++..  .+++ +++.||+...++  .....++.  .+.+.          |+
T Consensus        78 ~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~--~~i~-~v~~ss~~~~~~~~~~~~~~~~~~~~~~~----------Y~  141 (307)
T d1eq2a_          78 CSST---TEWDGKYMMDNNYQYSKELLHYCLE--REIP-FLYASSAATYGGRTSDFIESREYEKPLNV----------YG  141 (307)
T ss_dssp             CCCT---TCCCHHHHHHHTHHHHHHHHHHHHH--HTCC-EEEEEEGGGGTTCCSCBCSSGGGCCCSSH----------HH
T ss_pred             cccc---ccccccccccccccccccccccccc--cccc-ccccccccccccccccccccccccccccc----------cc
Confidence            6432   2334567788899999999999999  6775 777777733333  22222222  12233          44


Q ss_pred             hhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc---cchHHHH--HHHhCCCC----CCCCCccccccHHHHHHH
Q 017977          202 RGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL---AKMIPLF--MMFAGGPL----GSGQQWFSWIHLDDIVNL  272 (363)
Q Consensus       202 ~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~---~~~~~~~--~~~~~~~~----~~~~~~~~~i~v~D~a~a  272 (363)
                      .+|...+..... +....+++++++||+++|||.....   ..+...+  ....++..    +++...++++|++|++++
T Consensus       142 ~~K~~~e~~~~~-~~~~~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~~~  220 (307)
T d1eq2a_         142 YSKFLFDEYVRQ-ILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADV  220 (307)
T ss_dssp             HHHHHHHHHHHH-HGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHH
T ss_pred             cccchhhhhccc-cccccccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeecccHHHH
Confidence            445444444444 4444599999999999999976322   2233333  22333332    677778999999999999


Q ss_pred             HHHHhcCCCCCceEEeeCCCCcCHHHHHHHHHHHhCCCC--CCCCcHHHHHHHhccCceeeecCcccChhhHHH-cCCCc
Q 017977          273 IYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPS--WLPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPF  349 (363)
Q Consensus       273 ~~~~~~~~~~~g~~~i~~~~~~s~~el~~~i~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lG~~p  349 (363)
                      +..++.+.. .+.||+++++..+++|+++.+.+..++..  ..+.|+...        .........+++|+++ +||+|
T Consensus       221 ~~~~~~~~~-~~~~~~~~~~~~si~~i~~~i~~~~~~~~i~~~~~~~~~~--------~~~~~~~~~d~~k~~~~~~~~p  291 (307)
T d1eq2a_         221 NLWFLENGV-SGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLK--------GRYQAFTQADLTNLRAAGYDKP  291 (307)
T ss_dssp             HHHHHHHCC-CEEEEESCSCCBCHHHHHHHC-----------------------------CCCSCCBCCHHHHHTTCCCC
T ss_pred             HHHHhhhcc-ccccccccccchhHHHHHHHHHHhcCCCCeeEeeCCccCC--------CCCceeeecCHHHHHHHHCCCC
Confidence            999998654 67999999999999999999988776542  222222211        1111223347899976 79999


Q ss_pred             ccccHHHHHHHHhC
Q 017977          350 KYRYVKDALKAIMS  363 (363)
Q Consensus       350 ~~~~~~~~l~~~~~  363 (363)
                      +++ ++|+|+++++
T Consensus       292 ~~s-l~egi~~~i~  304 (307)
T d1eq2a_         292 FKT-VAEGVTEYMA  304 (307)
T ss_dssp             CCC-HHHHHHHHHH
T ss_pred             CCC-HHHHHHHHHH
Confidence            997 9999999874

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.96  E-value=6.9e-30  Score=224.49  Aligned_cols=277  Identities=12%  Similarity=0.072  Sum_probs=180.7

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc--CCCEEEEccCCCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGTPI  128 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~Vi~~a~~~~  128 (363)
                      |||||||||||||++|++.|.+.|+.| ++++....             ...|+.|.+.+.+.++  ++|+|||+||.. 
T Consensus         1 MKILItG~tGfiG~~l~~~L~~~g~~v-~~~~~~~~-------------~~~Dl~~~~~~~~~i~~~~~D~Vih~Aa~~-   65 (298)
T d1n2sa_           1 MNILLFGKTGQVGWELQRSLAPVGNLI-ALDVHSKE-------------FCGDFSNPKGVAETVRKLRPDVIVNAAAHT-   65 (298)
T ss_dssp             CEEEEECTTSHHHHHHHHHTTTTSEEE-EECTTCSS-------------SCCCTTCHHHHHHHHHHHCCSEEEECCCCC-
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEE-EEECCCcc-------------ccCcCCCHHHHHHHHHHcCCCEEEEecccc-
Confidence            789999999999999999999998755 44444321             2368889999998887  469999999974 


Q ss_pred             CCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecC---CcccccccCCCcchhhhhhhcccchhhHH
Q 017977          129 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLM---RAAHQEMITWLSDYCAKVYCLVSFNRGVL  205 (363)
Q Consensus       129 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg---~~~~~e~~~~~~~~~~~~~~~~~y~~~k~  205 (363)
                      ....+...+...++.|+.++.++++++.+  .+. +++++||+ .+|+   ..+++|+.+..+..        .|+.+|+
T Consensus        66 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~-~~~~~ss~-~~~~~~~~~~~~E~~~~~p~~--------~y~~~k~  133 (298)
T d1n2sa_          66 AVDKAESEPELAQLLNATSVEAIAKAANE--TGA-WVVHYSTD-YVFPGTGDIPWQETDATSPLN--------VYGKTKL  133 (298)
T ss_dssp             CHHHHTTCHHHHHHHHTHHHHHHHHHHTT--TTC-EEEEEEEG-GGSCCCTTCCBCTTSCCCCSS--------HHHHHHH
T ss_pred             cccccccCccccccccccccccchhhhhc--ccc-cccccccc-ccccCCCCCCCccccccCCCc--------hHhhhhh
Confidence            32334556778899999999999999988  554 58888888 5665   66778877754321        1233332


Q ss_pred             HHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCC-CCCCCccccccHHHHHHHHHHHhc----CC
Q 017977          206 VCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPL-GSGQQWFSWIHLDDIVNLIYEALS----NP  280 (363)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~D~a~a~~~~~~----~~  280 (363)
                      ..++.   ....  .....++|++..++..+......+.. ....+.++ ..+...++++++.|+++++..++.    .+
T Consensus       134 ~~e~~---~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~i~~~~~~~  207 (298)
T d1n2sa_         134 AGEKA---LQDN--CPKHLIFRTSWVYAGKGNNFAKTMLR-LAKERQTLSVINDQYGAPTGAELLADCTAHAIRVALNKP  207 (298)
T ss_dssp             HHHHH---HHHH--CSSEEEEEECSEECSSSCCHHHHHHH-HHHHCSEEEEECSCEECCEEHHHHHHHHHHHHHHHHHCG
T ss_pred             hhhhh---HHhh--hcccccccccceeeccCCccchhhhh-hhcccceeecccceeecccccchHHHHHHHHHhhhhccc
Confidence            22222   2222  33456666666665443332222211 22233333 445667889999999999988764    33


Q ss_pred             CCCceEEeeCCCCcCHHHHHHHHHHHhCCCC-CCCCcHHH--HHHHhccCceeeecCcccChhhHHH-cCCCcccccHHH
Q 017977          281 SYRGVINGTAPNPVRLAEMCDHLGNVLGRPS-WLPVPEFA--LKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYRYVKD  356 (363)
Q Consensus       281 ~~~g~~~i~~~~~~s~~el~~~i~~~~g~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~k~~~-lG~~p~~~~~~~  356 (363)
                      ...++||+++++.+++.++++.+.+..+... ..+.+...  ....+..... ......+|++|+++ +||+|+  +|++
T Consensus       208 ~~~~~~n~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~a~-RP~~~~ld~~K~~~~~~~~~~--~~~~  284 (298)
T d1n2sa_         208 EVAGLYHLVAGGTTTWHDYAALVFDEARKAGITLALTELNAVPTSAYPTPAS-RPGNSRLNTEKFQRNFDLILP--QWEL  284 (298)
T ss_dssp             GGCEEEECCCBSCEEHHHHHHHHHHHHHHHTCCCCCCEEEEECSTTSCCSSC-CCSBCCBCCHHHHHHHTCCCC--BHHH
T ss_pred             cccccccccCCCceecHHHHHHHHhhhhccCccccccceeeeehhhcCccCC-CccccccCHHHHHHHHCCCCC--cHHH
Confidence            4567999999999999999999988775431 11111000  0000000000 00122468999975 899998  4999


Q ss_pred             HHHHHhC
Q 017977          357 ALKAIMS  363 (363)
Q Consensus       357 ~l~~~~~  363 (363)
                      +|+++++
T Consensus       285 gl~~~i~  291 (298)
T d1n2sa_         285 GVKRMLT  291 (298)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9999873

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.94  E-value=4.1e-28  Score=214.34  Aligned_cols=237  Identities=15%  Similarity=0.141  Sum_probs=159.9

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCccccc-------CCCCCccccCcccccCcchHHhhccCCCEEEE
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI-------FPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVN  122 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~  122 (363)
                      ++||||||||||||++|+++|+++||+|++++|+.......       .... ......+|+.|.+.+...+.+++++++
T Consensus         3 k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~-~v~~v~~d~~d~~~~~~~~~~~~~~~~   81 (312)
T d1qyda_           3 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQL-GAKLIEASLDDHQRLVDALKQVDVVIS   81 (312)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTT-TCEEECCCSSCHHHHHHHHTTCSEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccC-CcEEEEeecccchhhhhhccCcchhhh
Confidence            46899999999999999999999999999999987543211       0011 111445789999999999999999999


Q ss_pred             ccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhcccchh
Q 017977          123 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVSFNR  202 (363)
Q Consensus       123 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~~y~~  202 (363)
                      +++....            ..|..++.++++++.+  .+..++++.||. ++++.....+..+. ..+..          
T Consensus        82 ~~~~~~~------------~~~~~~~~~~l~~a~~--~~~~~~v~~Ss~-g~~~~~~~~~~~~~-~~~~~----------  135 (312)
T d1qyda_          82 ALAGGVL------------SHHILEQLKLVEAIKE--AGNIKRFLPSEF-GMDPDIMEHALQPG-SITFI----------  135 (312)
T ss_dssp             CCCCSSS------------STTTTTHHHHHHHHHH--SCCCSEEECSCC-SSCTTSCCCCCSST-THHHH----------
T ss_pred             hhhhccc------------ccchhhhhHHHHHHHH--hcCCcEEEEeec-cccCCCcccccchh-hhhhH----------
Confidence            9976322            1355667788999998  777788888877 44431111111111 11111          


Q ss_pred             hHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCC--CCCCCCccccccHHHHHHHHHHHhcCC
Q 017977          203 GVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGP--LGSGQQWFSWIHLDDIVNLIYEALSNP  280 (363)
Q Consensus       203 ~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~v~D~a~a~~~~~~~~  280 (363)
                           .+.....+....+++++++||+.+||+..+....+........+..  ++++++.+++|+++|+|++++.++.++
T Consensus       136 -----~~~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~  210 (312)
T d1qyda_         136 -----DKRKVRRAIEAASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDP  210 (312)
T ss_dssp             -----HHHHHHHHHHHTTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCG
T ss_pred             -----HHHHHHHhhcccccceEEeccceeecCCccchhhHHHHhhhcccccccccccccccceeeHHHHHHHHHHHhcCc
Confidence                 1111112222348999999999999975433222211111011111  277889999999999999999999887


Q ss_pred             CC-Cc-eEEeeCCCCcCHHHHHHHHHHHhCCCC-CCCCcHH
Q 017977          281 SY-RG-VINGTAPNPVRLAEMCDHLGNVLGRPS-WLPVPEF  318 (363)
Q Consensus       281 ~~-~g-~~~i~~~~~~s~~el~~~i~~~~g~~~-~~~~~~~  318 (363)
                      .. ++ .|++++++.+|++|+++.+++.+|++. ..++|..
T Consensus       211 ~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~i~~~  251 (312)
T d1qyda_         211 QTLNKTMYIRPPMNILSQKEVIQIWERLSEQNLDKIYISSQ  251 (312)
T ss_dssp             GGSSSEEECCCGGGEEEHHHHHHHHHHHHTCCCEECCBCSH
T ss_pred             cccCceEEEeCCCcCCCHHHHHHHHHHHHCCCCeEEECCHH
Confidence            63 44 456666678999999999999999873 3344443

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=8.5e-26  Score=187.13  Aligned_cols=201  Identities=14%  Similarity=0.089  Sum_probs=140.7

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCCCC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPI  128 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~~~  128 (363)
                      .|+||+||||||++|++++++|+++||+|++++|++++........  .....+|+.|.+++.++++++|+|||++|...
T Consensus         2 ~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~~~~--~~~~~gD~~d~~~l~~al~~~d~vi~~~g~~~   79 (205)
T d1hdoa_           2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRP--AHVVVGDVLQAADVDKTVAGQDAVIVLLGTRN   79 (205)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCC--SEEEESCTTSHHHHHHHHTTCSEEEECCCCTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccccccc--cccccccccchhhHHHHhcCCCEEEEEeccCC
Confidence            5689999999999999999999999999999999987755443221  22556899999999999999999999998642


Q ss_pred             CCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhcccchhhHHHHH
Q 017977          129 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRGVLVCR  208 (363)
Q Consensus       129 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~~y~~~k~~~~  208 (363)
                      ....        .+++..++.++++++++  .+++++|++||. ++++.      .+..+.....      |...|... 
T Consensus        80 ~~~~--------~~~~~~~~~~l~~aa~~--~~v~r~i~~ss~-~~~~~------~~~~~~~~~~------~~~~~~~~-  135 (205)
T d1hdoa_          80 DLSP--------TTVMSEGARNIVAAMKA--HGVDKVVACTSA-FLLWD------PTKVPPRLQA------VTDDHIRM-  135 (205)
T ss_dssp             CCSC--------CCHHHHHHHHHHHHHHH--HTCCEEEEECCG-GGTSC------TTCSCGGGHH------HHHHHHHH-
T ss_pred             chhh--------hhhhHHHHHHHHHHHHh--cCCCeEEEEeee-eccCC------Cccccccccc------cchHHHHH-
Confidence            2111        13566788999999999  899999999998 54441      0111111111      11112111 


Q ss_pred             HHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHHHHHhcCCCCCc-eEE
Q 017977          209 EWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRG-VIN  287 (363)
Q Consensus       209 ~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~g-~~~  287 (363)
                        +.  .....+++|+|+||+.+++........+           ..++.....+|+++|+|++++.++++++..| .+.
T Consensus       136 --e~--~l~~~~~~~tiirp~~~~~~~~~~~~~~-----------~~~~~~~~~~i~~~DvA~~~~~~l~~~~~~g~~~~  200 (205)
T d1hdoa_         136 --HK--VLRESGLKYVAVMPPHIGDQPLTGAYTV-----------TLDGRGPSRVISKHDLGHFMLRCLTTDEYDGHSTY  200 (205)
T ss_dssp             --HH--HHHHTCSEEEEECCSEEECCCCCSCCEE-----------ESSSCSSCSEEEHHHHHHHHHHTTSCSTTTTCEEE
T ss_pred             --HH--HHHhcCCceEEEecceecCCCCcccEEE-----------eeCCCCCCCcCCHHHHHHHHHHHhCCCCCCCEEEe
Confidence              21  2223499999999999987533211010           1234556678999999999999999887544 666


Q ss_pred             eeC
Q 017977          288 GTA  290 (363)
Q Consensus       288 i~~  290 (363)
                      +..
T Consensus       201 ~s~  203 (205)
T d1hdoa_         201 PSH  203 (205)
T ss_dssp             EEC
T ss_pred             cCC
Confidence            554

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.2e-25  Score=189.96  Aligned_cols=206  Identities=15%  Similarity=0.067  Sum_probs=143.9

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCC--EEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  127 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~~  127 (363)
                      +++|||||||||||++|+++|+++|+  +|++++|++.........  ......+|+.+.+++.++++++|+|||+++..
T Consensus        14 ~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~~~--~i~~~~~D~~~~~~~~~~~~~~d~vi~~~~~~   91 (232)
T d2bkaa1          14 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYK--NVNQEVVDFEKLDDYASAFQGHDVGFCCLGTT   91 (232)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGG--GCEEEECCGGGGGGGGGGGSSCSEEEECCCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccccc--eeeeeeeccccccccccccccccccccccccc
Confidence            36899999999999999999999984  899999987553322111  11133367888888999999999999999863


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhcccchhhHHHH
Q 017977          128 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRGVLVC  207 (363)
Q Consensus       128 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~~y~~~k~~~  207 (363)
                          ........+.++|+.++.+++++|.+  .++++||++||. +.++        .+...|.          ++|+. 
T Consensus        92 ----~~~~~~~~~~~~~~~~~~~~~~~a~~--~~v~~fi~~Ss~-~~~~--------~~~~~Y~----------~~K~~-  145 (232)
T d2bkaa1          92 ----RGKAGAEGFVRVDRDYVLKSAELAKA--GGCKHFNLLSSK-GADK--------SSNFLYL----------QVKGE-  145 (232)
T ss_dssp             ----HHHHHHHHHHHHHTHHHHHHHHHHHH--TTCCEEEEECCT-TCCT--------TCSSHHH----------HHHHH-
T ss_pred             ----ccccchhhhhhhcccccceeeecccc--cCccccccCCcc-cccc--------CccchhH----------HHHHH-
Confidence                22344567889999999999999999  899999999998 4332        1122333          33322 


Q ss_pred             HHHHHHHhccCCCc-eEEEEeeceEEeCCCCcccchHHHH-HHHhCCCCCCCCCccccccHHHHHHHHHHHhcCCCCCce
Q 017977          208 REWEGTALKVNKDV-RLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGV  285 (363)
Q Consensus       208 ~~~~~~~~~~~~~~-~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~g~  285 (363)
                        .|.....  .++ +++|+||+.+||+....  +....+ ..... .+.........|+++|+|++++.++.++...+.
T Consensus       146 --~E~~l~~--~~~~~~~IlRP~~i~G~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~I~~~dvA~a~i~~~~~~~~~~~  218 (232)
T d2bkaa1         146 --VEAKVEE--LKFDRYSVFRPGVLLCDRQES--RPGEWLVRKFFG-SLPDSWASGHSVPVVTVVRAMLNNVVRPRDKQM  218 (232)
T ss_dssp             --HHHHHHT--TCCSEEEEEECCEEECTTGGG--SHHHHHHHHHHC-SCCTTGGGGTEEEHHHHHHHHHHHHTSCCCSSE
T ss_pred             --hhhcccc--ccccceEEecCceeecCCCcC--cHHHHHHHHHhh-ccCCcccCCCeEEHHHHHHHHHHHHhcCccCCe
Confidence              2333322  355 59999999999986532  122111 11111 223334445679999999999999988776777


Q ss_pred             EEeeC
Q 017977          286 INGTA  290 (363)
Q Consensus       286 ~~i~~  290 (363)
                      +.+.+
T Consensus       219 ~i~~~  223 (232)
T d2bkaa1         219 ELLEN  223 (232)
T ss_dssp             EEEEH
T ss_pred             EEEcH
Confidence            77654

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.94  E-value=2.4e-27  Score=208.58  Aligned_cols=233  Identities=15%  Similarity=0.142  Sum_probs=157.0

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCC-------CCCccccCcccccCcchHHhhccCCCEEE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP-------GKKTRFFPGVMIAEEPQWRDCIQGSTAVV  121 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi  121 (363)
                      ++|||||||||||||++|+++|+++||+|++++|++........       ..........|+.+.+.+.+.+++++.|+
T Consensus         2 ~kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~vi   81 (307)
T d1qyca_           2 SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVI   81 (307)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhhhceeee
Confidence            45799999999999999999999999999999998755322100       00001134468888888889999999999


Q ss_pred             EccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhcccch
Q 017977          122 NLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVSFN  201 (363)
Q Consensus       122 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~~y~  201 (363)
                      |+++..                +..++.++++++..  .+++++++.||. +...    ++....  .+...      + 
T Consensus        82 ~~~~~~----------------~~~~~~~~~~a~~~--~~~~~~~~~s~~-~~~~----~~~~~~--~~~~~------~-  129 (307)
T d1qyca_          82 STVGSL----------------QIESQVNIIKAIKE--VGTVKRFFPSEF-GNDV----DNVHAV--EPAKS------V-  129 (307)
T ss_dssp             ECCCGG----------------GSGGGHHHHHHHHH--HCCCSEEECSCC-SSCT----TSCCCC--TTHHH------H-
T ss_pred             eccccc----------------ccchhhHHHHHHHH--hccccceeeecc-cccc----cccccc--ccccc------c-
Confidence            998752                44556688888888  788888888876 3221    111111  11111      0 


Q ss_pred             hhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCC---CCCCCCccccccHHHHHHHHHHHhc
Q 017977          202 RGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGP---LGSGQQWFSWIHLDDIVNLIYEALS  278 (363)
Q Consensus       202 ~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~v~D~a~a~~~~~~  278 (363)
                          .........+....+++++++||+.+||+.......+..  ....+..   ++.+++.+++++++|+|++++.+++
T Consensus       130 ----~~~~~~~~~~~~~~~~~~~i~r~~~v~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~  203 (307)
T d1qyca_         130 ----FEVKAKVRRAIEAEGIPYTYVSSNCFAGYFLRSLAQAGL--TAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVD  203 (307)
T ss_dssp             ----HHHHHHHHHHHHHHTCCBEEEECCEEHHHHTTTTTCTTC--SSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSS
T ss_pred             ----ccccccccchhhccCCCceecccceecCCCccchhhhhh--hhhhcccceeeecccccccCCcHHHHHHHHHHHhc
Confidence                001111111112238999999999999975433222111  1112221   2778899999999999999999998


Q ss_pred             CCCC-Cc-eEEeeCCCCcCHHHHHHHHHHHhCCCCC-CCCcHHH
Q 017977          279 NPSY-RG-VINGTAPNPVRLAEMCDHLGNVLGRPSW-LPVPEFA  319 (363)
Q Consensus       279 ~~~~-~g-~~~i~~~~~~s~~el~~~i~~~~g~~~~-~~~~~~~  319 (363)
                      ++.. ++ .|++++++.+|+.|+++.+.+++|++.. ..+|.+.
T Consensus       204 ~~~~~~~~~~~~~~~~~~s~~ei~~~~~~~~G~~~~~~~~~~~~  247 (307)
T d1qyca_         204 DPRTLNKTLYLRLPANTLSLNELVALWEKKIDKTLEKAYVPEEE  247 (307)
T ss_dssp             CGGGTTEEEECCCGGGEEEHHHHHHHHHHHTTSCCEEEEECHHH
T ss_pred             ChhhcCceeEEeCCCCccCHHHHHHHHHHHHCCCCcEEECCHHH
Confidence            8763 34 5666777889999999999999998732 3444443

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.93  E-value=1.3e-25  Score=191.20  Aligned_cols=231  Identities=16%  Similarity=0.079  Sum_probs=156.8

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCC--EEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      +|++|||||||||||++|++.|+++|+  .|+.+.|++++...+.....   ...+|+.+.+.+.++++++|+|||+++.
T Consensus         2 ~~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~~~~~---~~~~d~~~~~~~~~~~~~~d~vi~~a~~   78 (252)
T d2q46a1           2 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEAD---VFIGDITDADSINPAFQGIDALVILTSA   78 (252)
T ss_dssp             SCCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTCCTT---EEECCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhccCCcE---EEEeeeccccccccccccceeeEEEEee
Confidence            467999999999999999999999996  46777888766554443322   5568999999999999999999999986


Q ss_pred             CCCCCC------------ChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhhhh
Q 017977          127 PIGTRW------------SSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKV  194 (363)
Q Consensus       127 ~~~~~~------------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~  194 (363)
                      ......            ..........+|+.++.++++.+..  ...+.+.+.|+. ..+.     ...+. ..+... 
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~s~~-~~~~-----~~~~~-~~~~~~-  148 (252)
T d2q46a1          79 VPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKV--AGVKHIVVVGSM-GGTN-----PDHPL-NKLGNG-  148 (252)
T ss_dssp             CCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHH--HTCSEEEEEEET-TTTC-----TTCGG-GGGGGC-
T ss_pred             ccccccccchhhhhhcccccccchhhhccccccceeecccccc--cccccccccccc-ccCC-----CCccc-cccccc-
Confidence            432110            0122345567899999999999998  677878888876 3221     11111 111111 


Q ss_pred             hhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHHH
Q 017977          195 YCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY  274 (363)
Q Consensus       195 ~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~  274 (363)
                          .|     ...+.....+....+++++++||+.+||+.......+..       ..........++|+++|+|++++
T Consensus       149 ----~~-----~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~-------~~~~~~~~~~~~i~~~Dva~a~~  212 (252)
T d2q46a1         149 ----NI-----LVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGVRELLVG-------KDDELLQTDTKTVPRADVAEVCI  212 (252)
T ss_dssp             ----CH-----HHHHHHHHHHHHHSSSCEEEEEECEEECSCTTSSCEEEE-------STTGGGGSSCCEEEHHHHHHHHH
T ss_pred             ----ch-----hhhhhhhhhhhhcccccceeecceEEECCCcchhhhhhc-------cCcccccCCCCeEEHHHHHHHHH
Confidence                11     122222333333358999999999999997644322211       11111233456999999999999


Q ss_pred             HHhcCCCCCc-eEEeeCCC---CcCHHHHHHHHHHHhC
Q 017977          275 EALSNPSYRG-VINGTAPN---PVRLAEMCDHLGNVLG  308 (363)
Q Consensus       275 ~~~~~~~~~g-~~~i~~~~---~~s~~el~~~i~~~~g  308 (363)
                      .+++++...| +||++++.   ..++.++.+++.++.+
T Consensus       213 ~~l~~~~~~g~~~~i~~~~~~~~~~~~~~~~lf~~i~~  250 (252)
T d2q46a1         213 QALLFEEAKNKAFDLGSKPEGTSTPTKDFKALFSQVTS  250 (252)
T ss_dssp             HHTTCGGGTTEEEEEEECCTTTSCCCCCHHHHHTTCCC
T ss_pred             HHhCCccccCcEEEEeeCCCCCChhHHHHHHHHHHHHh
Confidence            9998877555 99998743   4567788887776654

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.89  E-value=1.3e-22  Score=168.83  Aligned_cols=195  Identities=14%  Similarity=0.115  Sum_probs=127.8

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCC--EEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhc-cCCCEEEEccCCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI-QGSTAVVNLAGTP  127 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-~~~d~Vi~~a~~~  127 (363)
                      +||||||||||||++|+++|+++|+  +|++++|++.....         ....+..|..++...+ .++|+|||++|..
T Consensus         3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~~~---------~~~~~~~d~~~~~~~~~~~~d~vi~~~g~~   73 (212)
T d2a35a1           3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEHP---------RLDNPVGPLAELLPQLDGSIDTAFCCLGTT   73 (212)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCCCT---------TEECCBSCHHHHGGGCCSCCSEEEECCCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhhcc---------cccccccchhhhhhccccchheeeeeeeee
Confidence            6999999999999999999999997  77777776543221         1112333434443333 4689999999864


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhcccchhhHHHH
Q 017977          128 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRGVLVC  207 (363)
Q Consensus       128 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~~y~~~k~~~  207 (363)
                      ..   .......+.+.|+.++.+++++|++  .++++++++||. ++++        ...+.|...          |   
T Consensus        74 ~~---~~~~~~~~~~~~~~~~~~~~~~a~~--~~v~~~i~~Ss~-~~~~--------~~~~~y~~~----------K---  126 (212)
T d2a35a1          74 IK---EAGSEEAFRAVDFDLPLAVGKRALE--MGARHYLVVSAL-GADA--------KSSIFYNRV----------K---  126 (212)
T ss_dssp             HH---HHSSHHHHHHHHTHHHHHHHHHHHH--TTCCEEEEECCT-TCCT--------TCSSHHHHH----------H---
T ss_pred             cc---ccccccccccchhhhhhhccccccc--cccccccccccc-cccc--------ccccchhHH----------H---
Confidence            22   2233467889999999999999999  899999999998 4432        222233332          3   


Q ss_pred             HHHHHHHhccCCCc-eEEEEeeceEEeCCCCcccchHHHHHHHhCCCC-CCCCCccccccHHHHHHHHHHHhcCCCCCce
Q 017977          208 REWEGTALKVNKDV-RLALIRIGIVLGKDGGALAKMIPLFMMFAGGPL-GSGQQWFSWIHLDDIVNLIYEALSNPSYRGV  285 (363)
Q Consensus       208 ~~~~~~~~~~~~~~-~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~D~a~a~~~~~~~~~~~g~  285 (363)
                      .+.|....  ..++ +++|+||+.|||+.....  +...    -..++ ......+.+||++|+|++++.+++++. .|.
T Consensus       127 ~~~E~~l~--~~~~~~~~I~Rp~~v~G~~~~~~--~~~~----~~~~~~~~~~~~~~~i~v~DvA~ai~~~~~~~~-~g~  197 (212)
T d2a35a1         127 GELEQALQ--EQGWPQLTIARPSLLFGPREEFR--LAEI----LAAPIARILPGKYHGIEACDLARALWRLALEEG-KGV  197 (212)
T ss_dssp             HHHHHHHT--TSCCSEEEEEECCSEESTTSCEE--GGGG----TTCCCC----CHHHHHHHHHHHHHHHHHHTCCC-SEE
T ss_pred             HHHhhhcc--ccccccceeeCCcceeCCccccc--HHHH----HHHHHhhccCCCCcEEEHHHHHHHHHHHHcCCC-CCC
Confidence            22333322  2355 699999999999865431  1110    01111 111233567999999999999998765 455


Q ss_pred             EEeeC
Q 017977          286 INGTA  290 (363)
Q Consensus       286 ~~i~~  290 (363)
                      .++.+
T Consensus       198 ~~~~~  202 (212)
T d2a35a1         198 RFVES  202 (212)
T ss_dssp             EEEEH
T ss_pred             EEEEH
Confidence            55543

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.88  E-value=3.4e-22  Score=179.16  Aligned_cols=224  Identities=13%  Similarity=0.092  Sum_probs=146.6

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccc--cCCCCCccccCcccccCcc-hHHhhccCCCEEEEccCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL--IFPGKKTRFFPGVMIAEEP-QWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~d~~~~~-~~~~~~~~~d~Vi~~a~~  126 (363)
                      +|+|+|||||||||++|+++|+++||+|++++|++++...  +..... .....+|+.|.. .+..++.++|++++....
T Consensus         3 kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~-v~~~~gD~~d~~~~~~~a~~~~~~~~~~~~~   81 (350)
T d1xgka_           3 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPN-VTLFQGPLLNNVPLMDTLFEGAHLAFINTTS   81 (350)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTT-EEEEESCCTTCHHHHHHHHTTCSEEEECCCS
T ss_pred             CCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhhhhcccCC-CEEEEeeCCCcHHHHHHHhcCCceEEeeccc
Confidence            4789999999999999999999999999999998765432  111111 124456887754 467788999999887653


Q ss_pred             CCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhcccchhhHHH
Q 017977          127 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRGVLV  206 (363)
Q Consensus       127 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~~y~~~k~~  206 (363)
                      ..             ..++..+.++++++.+  .+++++++.||.. ...    ........++...             
T Consensus        82 ~~-------------~~~~~~~~~~~~aa~~--agv~~~v~~Ss~~-~~~----~~~~~~~~~~~~~-------------  128 (350)
T d1xgka_          82 QA-------------GDEIAIGKDLADAAKR--AGTIQHYIYSSMP-DHS----LYGPWPAVPMWAP-------------  128 (350)
T ss_dssp             TT-------------SCHHHHHHHHHHHHHH--HSCCSEEEEEECC-CGG----GTSSCCCCTTTHH-------------
T ss_pred             cc-------------chhhhhhhHHHHHHHH--hCCCceEEEeecc-ccc----cCCcccchhhhhh-------------
Confidence            21             1255667899999999  7888899999873 211    0001111122222             


Q ss_pred             HHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCC----CCCCCCCccccccH-HHHHHHHHHHhcCCC
Q 017977          207 CREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGG----PLGSGQQWFSWIHL-DDIVNLIYEALSNPS  281 (363)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~v-~D~a~a~~~~~~~~~  281 (363)
                        +...+.+....+++++++||+.+++.................+.    ....++..+.++++ +|+++++..++....
T Consensus       129 --k~~~~~~~~~~~~~~~~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~~~~  206 (350)
T d1xgka_         129 --KFTVENYVRQLGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGP  206 (350)
T ss_dssp             --HHHHHHHHHTSSSCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCH
T ss_pred             --HHHHHHHHHhhccCceeeeeceeeccccccccccccccccccccceeeecccCCCcceEEEeHHHHHHHHHHHHhCCh
Confidence              12222223334799999999998875321111100000001111    12456677788876 799999999986542


Q ss_pred             --C-CceEEeeCCCCcCHHHHHHHHHHHhCCC
Q 017977          282 --Y-RGVINGTAPNPVRLAEMCDHLGNVLGRP  310 (363)
Q Consensus       282 --~-~g~~~i~~~~~~s~~el~~~i~~~~g~~  310 (363)
                        . +..|++++ +.+|+.|+++.+.+.+|++
T Consensus       207 ~~~~G~~~~~~g-~~~T~~eia~~l~~~~G~~  237 (350)
T d1xgka_         207 QKWNGHRIALTF-ETLSPVQVCAAFSRALNRR  237 (350)
T ss_dssp             HHHTTCEEEECS-EEECHHHHHHHHHHHHTSC
T ss_pred             hhcCCeEEEEeC-CcCCHHHHHHHHHHHHCCc
Confidence              2 34788876 5699999999999999987

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.83  E-value=3.7e-20  Score=155.54  Aligned_cols=215  Identities=18%  Similarity=0.144  Sum_probs=143.7

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc-------CCCEE
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAV  120 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~V  120 (363)
                      .+.|++|||||++.||+++++.|+++|++|++++|+....+...       ...+|+.|.++++++++       ++|++
T Consensus         5 l~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~-------~~~~Dv~~~~~v~~~~~~~~~~~g~iDiL   77 (237)
T d1uzma1           5 FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF-------GVEVDVTDSDAVDRAFTAVEEHQGPVEVL   77 (237)
T ss_dssp             CCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSE-------EEECCTTCHHHHHHHHHHHHHHHSSCSEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhcCce-------EEEEecCCHHHHHHHHHHHHHhcCCceEE
Confidence            45579999999999999999999999999999999876654332       45689999988876654       68999


Q ss_pred             EEccCCCCC---CCCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhhhh
Q 017977          121 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVY  195 (363)
Q Consensus       121 i~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~  195 (363)
                      ||+||....   ...+.+..+..+++|+.++..+.+++.+.  ..+..++|++||..+..+       .+....|..+|.
T Consensus        78 VnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~-------~~~~~~Y~asKa  150 (237)
T d1uzma1          78 VSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWG-------IGNQANYAASKA  150 (237)
T ss_dssp             EEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC------------CCHHHHHHHH
T ss_pred             EeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccC-------CcccHHHHHHHH
Confidence            999997544   23456778899999999988776655432  145567999999854333       233456776665


Q ss_pred             hcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHHHH
Q 017977          196 CLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE  275 (363)
Q Consensus       196 ~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~  275 (363)
                      +...++++       ....+. .+|+++..|.||.+..+.......... -......|++      .+..++|+|+++..
T Consensus       151 al~~lt~~-------lA~e~~-~~gIrVN~I~PG~v~T~~~~~~~~~~~-~~~~~~~pl~------R~~~pedvA~~v~f  215 (237)
T d1uzma1         151 GVIGMARS-------IARELS-KANVTANVVAPGYIDTDMTRALDERIQ-QGALQFIPAK------RVGTPAEVAGVVSF  215 (237)
T ss_dssp             HHHHHHHH-------HHHHHG-GGTEEEEEEEECSBCCHHHHHSCHHHH-HHHGGGCTTC------SCBCHHHHHHHHHH
T ss_pred             HHHHHHHH-------HHhhhh-cCCceeeeeeeCcCCChhhhccCHHHH-HHHHhcCCCC------CCcCHHHHHHHHHH
Confidence            54444332       111112 238999999999987652111111000 0112222332      26789999999999


Q ss_pred             HhcCCC--CCc-eEEeeCC
Q 017977          276 ALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       276 ~~~~~~--~~g-~~~i~~~  291 (363)
                      ++....  ..| ++.+.+|
T Consensus       216 L~S~~s~~itG~~i~vdGG  234 (237)
T d1uzma1         216 LASEDASYISGAVIPVDGG  234 (237)
T ss_dssp             HHSGGGTTCCSCEEEESTT
T ss_pred             HhCchhcCCcCCeEEECCC
Confidence            986543  445 7777666

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=3.8e-20  Score=156.35  Aligned_cols=223  Identities=20%  Similarity=0.156  Sum_probs=149.8

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc---CCCEEEEcc
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ---GSTAVVNLA  124 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~~d~Vi~~a  124 (363)
                      ..+|++|||||++.||+++++.|+++|++|++++|+.++.+.+...........+|+.|.++++++++   ++|++||+|
T Consensus         5 L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~g~iDilVnnA   84 (244)
T d1pr9a_           5 LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNA   84 (244)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEECC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHhCCceEEEecc
Confidence            45689999999999999999999999999999999987755443322222345689999998887775   579999999


Q ss_pred             CCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC---CCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhcc
Q 017977          125 GTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES---PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLV  198 (363)
Q Consensus       125 ~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~  198 (363)
                      +.....   ..+.+..+..+++|+.++..+.+++.+.   ..+..++|++||.++..+       .+....|..+|.+..
T Consensus        85 g~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~-------~~~~~~Y~asKaal~  157 (244)
T d1pr9a_          85 AVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRA-------VTNHSVYCSTKGALD  157 (244)
T ss_dssp             CCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC-------CTTBHHHHHHHHHHH
T ss_pred             ccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeeccccccccc-------ccchhhhhhhHHHHH
Confidence            975442   3456778899999999988887776542   134467999998854221       233446666655444


Q ss_pred             cchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCc-ccchHHHHHHHhCCCCCCCCCccccccHHHHHHHHHHHh
Q 017977          199 SFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA-LAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEAL  277 (363)
Q Consensus       199 ~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~  277 (363)
                      .++++       ....+. ..|+++..|.||.+..+.... .......-......|++      .+..++|+|+++..++
T Consensus       158 ~lt~~-------lA~el~-~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~------R~~~peevA~~v~fL~  223 (244)
T d1pr9a_         158 MLTKV-------MALELG-PHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLG------KFAEVEHVVNAILFLL  223 (244)
T ss_dssp             HHHHH-------HHHHHG-GGTEEEEEEEECCBCSHHHHTTSCSHHHHHHHHTTCTTC------SCBCHHHHHHHHHHHH
T ss_pred             HHHHH-------HHHHhC-CCcEEEEEEeeCcCcChHHhhhccChHHHHHHHhcCCCC------CCcCHHHHHHHHHHHh
Confidence            33321       111112 238999999999987652111 11111111222333332      2678999999999998


Q ss_pred             cCCC--CCc-eEEeeCC
Q 017977          278 SNPS--YRG-VINGTAP  291 (363)
Q Consensus       278 ~~~~--~~g-~~~i~~~  291 (363)
                      ....  ..| ++.+.+|
T Consensus       224 S~~a~~itG~~i~vDGG  240 (244)
T d1pr9a_         224 SDRSGMTTGSTLPVEGG  240 (244)
T ss_dssp             SGGGTTCCSCEEEESTT
T ss_pred             CchhCCcCCcEEEECcc
Confidence            6543  455 6777665

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.81  E-value=3.1e-19  Score=150.43  Aligned_cols=220  Identities=16%  Similarity=0.120  Sum_probs=148.8

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc-------CCCEEE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV  121 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~Vi  121 (363)
                      ..++++||||++.||+++++.|+++|++|++++|+..+.+...+.... ....+|+.|.++++++++       .+|++|
T Consensus         4 ~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~~~-~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilV   82 (242)
T d1ulsa_           4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGA-HPVVMDVADPASVERGFAEALAHLGRLDGVV   82 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTC-EEEECCTTCHHHHHHHHHHHHHHHSSCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCC-eEEEEecCCHHHHHHHHHHHHHhcCCceEEE
Confidence            457899999999999999999999999999999998765554333221 245689999988877664       689999


Q ss_pred             EccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhhhhh
Q 017977          122 NLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYC  196 (363)
Q Consensus       122 ~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~  196 (363)
                      |+||.....   ..+.+..+..+++|+.++..+.+++.+.  ..+...++++||. +..+       .+....|..+|.+
T Consensus        83 nnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~-~~~~-------~~~~~~Y~asKaa  154 (242)
T d1ulsa_          83 HYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASR-VYLG-------NLGQANYAASMAG  154 (242)
T ss_dssp             ECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCG-GGGC-------CTTCHHHHHHHHH
T ss_pred             ECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeeccc-cccC-------CCCCcchHHHHHH
Confidence            999975442   3456778899999999999998887764  2344445666655 3222       3344567777655


Q ss_pred             cccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHHHHH
Q 017977          197 LVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEA  276 (363)
Q Consensus       197 ~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~  276 (363)
                      ...++++  ++.     .+. .+|+++..|.||.+-.+.......... -......|++      .+..++|+|+++..+
T Consensus       155 l~~ltk~--lA~-----ela-~~gIrVN~I~PG~v~T~~~~~~~~~~~-~~~~~~~pl~------R~~~pedia~~v~fL  219 (242)
T d1ulsa_         155 VVGLTRT--LAL-----ELG-RWGIRVNTLAPGFIETRMTAKVPEKVR-EKAIAATPLG------RAGKPLEVAYAALFL  219 (242)
T ss_dssp             HHHHHHH--HHH-----HHG-GGTEEEEEEEECSBCCTTTSSSCHHHH-HHHHHTCTTC------SCBCHHHHHHHHHHH
T ss_pred             HHHHHHH--HHH-----HHh-hhCcEEEEEeeCcccChhhhcCCHHHH-HHHHhcCCCC------CCCCHHHHHHHHHHH
Confidence            4444332  111     111 238999999999998765332211111 1223333433      266799999999999


Q ss_pred             hcCCC--CCc-eEEeeCCC
Q 017977          277 LSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       277 ~~~~~--~~g-~~~i~~~~  292 (363)
                      +....  ..| .+.+.+|.
T Consensus       220 ~S~~s~~itG~~i~vDGG~  238 (242)
T d1ulsa_         220 LSDESSFITGQVLFVDGGR  238 (242)
T ss_dssp             HSGGGTTCCSCEEEESTTT
T ss_pred             hchhhCCCCCcEEEECCCc
Confidence            86543  445 77777664

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.81  E-value=3.9e-20  Score=155.99  Aligned_cols=220  Identities=20%  Similarity=0.139  Sum_probs=147.7

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc---CCCEEEEccC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ---GSTAVVNLAG  125 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~~d~Vi~~a~  125 (363)
                      ++|++|||||++.||+++++.|+++|++|++++|+.++...+...........+|+.|.++++++++   ++|++||+||
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDilVnnAg   83 (242)
T d1cyda_           4 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNAA   83 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHcCCCeEEEECCc
Confidence            4689999999999999999999999999999999987654443322223355689999998888876   5799999999


Q ss_pred             CCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC---CCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhccc
Q 017977          126 TPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES---PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVS  199 (363)
Q Consensus       126 ~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~~  199 (363)
                      .....   ..+.+..+..+++|+.++..+.+++.+.   +....++|++||.++..+       .+....|..+|.+...
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~-------~~~~~~Y~asKaal~~  156 (242)
T d1cyda_          84 LVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVT-------FPNLITYSSTKGAMTM  156 (242)
T ss_dssp             CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC-------CTTBHHHHHHHHHHHH
T ss_pred             cccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhcccc-------CCccccccchHHHHHH
Confidence            75442   3466778889999999999888766541   123456899998843211       3334567666655444


Q ss_pred             chhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc---cchHHHHHHHhCCCCCCCCCccccccHHHHHHHHHHH
Q 017977          200 FNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL---AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEA  276 (363)
Q Consensus       200 y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~  276 (363)
                      ++++       ....+. .+|+++..|.||.+..+.....   .....  ......|++      .+..++|+|+++..+
T Consensus       157 lt~~-------lA~e~~-~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~--~~~~~~pl~------R~~~peeva~~v~fL  220 (242)
T d1cyda_         157 LTKA-------MAMELG-PHKIRVNSVNPTVVLTDMGKKVSADPEFAR--KLKERHPLR------KFAEVEDVVNSILFL  220 (242)
T ss_dssp             HHHH-------HHHHHG-GGTEEEEEEEECCBTTHHHHHHTCCHHHHH--HHHHHSTTS------SCBCHHHHHHHHHHH
T ss_pred             HHHH-------HHHHhC-ccCeecccCCCCCccCHHHHhhcCCHHHHH--HHHhcCCCC------CCcCHHHHHHHHHHH
Confidence            4332       111111 2389999999998865421110   11111  112222332      267899999999999


Q ss_pred             hcCCC--CCc-eEEeeCC
Q 017977          277 LSNPS--YRG-VINGTAP  291 (363)
Q Consensus       277 ~~~~~--~~g-~~~i~~~  291 (363)
                      +....  ..| ++.+.+|
T Consensus       221 ~S~~s~~itG~~i~vDGG  238 (242)
T d1cyda_         221 LSDRSASTSGGGILVDAG  238 (242)
T ss_dssp             HSGGGTTCCSSEEEESTT
T ss_pred             hCchhcCcCCceEEeCcc
Confidence            86543  445 7777765

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=6e-20  Score=155.39  Aligned_cols=224  Identities=14%  Similarity=0.042  Sum_probs=150.7

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc-------CCCEEE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV  121 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~Vi  121 (363)
                      .+|+++||||++.||+++++.|+++|++|++++|+.+..+.+...........+|+.|.++++++++       ++|++|
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilV   84 (250)
T d1ydea1           5 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVV   84 (250)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            4579999999999999999999999999999999887655544333333456789999988877664       689999


Q ss_pred             EccCCCCC----CCCChhhHHHHHHHHHHHHHHHHHHHHhC-CCCCCCeEEEeccceecCCcccccccCCCcchhhhhhh
Q 017977          122 NLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYC  196 (363)
Q Consensus       122 ~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~  196 (363)
                      |+||....    ...+.+..+..+++|+.++..+.+++.+. ..+..++|++||..+..+       .+....|..+|.+
T Consensus        85 nnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~~~~-------~~~~~~Y~asKaa  157 (250)
T d1ydea1          85 NNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIG-------QAQAVPYVATKGA  157 (250)
T ss_dssp             ECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHC-------CTTCHHHHHHHHH
T ss_pred             ecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCccccccccccc-------ccCcchhHHHHhh
Confidence            99996432    13455678899999999999888877754 223357999999854322       3344567777655


Q ss_pred             cccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCC----cccchHHHH-HHHhCCCCCCCCCccccccHHHHHH
Q 017977          197 LVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGG----ALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVN  271 (363)
Q Consensus       197 ~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~----~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~  271 (363)
                      ...++++       ....+. .+|+++..|.||.|..+...    ........+ ......|++      .+..++|+|+
T Consensus       158 l~~lt~~-------lA~e~a-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~------R~g~p~eva~  223 (250)
T d1ydea1         158 VTAMTKA-------LALDES-PYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLG------RMGQPAEVGA  223 (250)
T ss_dssp             HHHHHHH-------HHHHHG-GGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTS------SCBCHHHHHH
T ss_pred             HHHHHHH-------HHHHhc-ccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCCCC------CCCCHHHHHH
Confidence            4444332       111111 23899999999998654210    000011111 222333332      3678999999


Q ss_pred             HHHHHhcCCC-CCc-eEEeeCCCC
Q 017977          272 LIYEALSNPS-YRG-VINGTAPNP  293 (363)
Q Consensus       272 a~~~~~~~~~-~~g-~~~i~~~~~  293 (363)
                      ++..++.... ..| ++.+.+|..
T Consensus       224 ~v~fL~Sda~~itG~~i~vDGG~~  247 (250)
T d1ydea1         224 AAVFLASEANFCTGIELLVTGGAE  247 (250)
T ss_dssp             HHHHHHHHCTTCCSCEEEESTTTT
T ss_pred             HHHHHhCccCCCcCCeEEECCCcc
Confidence            9999886433 345 777777643

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=99.80  E-value=3.8e-19  Score=151.50  Aligned_cols=225  Identities=12%  Similarity=0.019  Sum_probs=146.5

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCc-cc----ccCCCCCccccCcccccCcchHHhhcc-------
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK-AE----LIFPGKKTRFFPGVMIAEEPQWRDCIQ-------  115 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~----~~~~~~~~~~~~~~d~~~~~~~~~~~~-------  115 (363)
                      .+.|+++||||++.||+++++.|+++|++|++.+|+.++ .+    .+...........+|+.|.++++++++       
T Consensus         5 L~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G   84 (261)
T d1geea_           5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFG   84 (261)
T ss_dssp             GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            355799999999999999999999999999999998653 21    111222223345689999988877664       


Q ss_pred             CCCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCC-CCeEEEeccceecCCcccccccCCCcc
Q 017977          116 GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGV-RPSVLELVKPKYLMRAAHQEMITWLSD  189 (363)
Q Consensus       116 ~~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~-~~~v~~SS~~~~yg~~~~~e~~~~~~~  189 (363)
                      ++|++||+||.....   ..+.+..+..+++|+.++..+.+++.+.  ..+. ..+|++||.++..+       .+....
T Consensus        85 ~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~-------~~~~~~  157 (261)
T d1geea_          85 KLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIP-------WPLFVH  157 (261)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSC-------CTTCHH
T ss_pred             CCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhccc-------Cccccc
Confidence            689999999975442   3456778899999999988887776543  1333 34788898843221       233456


Q ss_pred             hhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHH-HHHhCCCCCCCCCccccccHHH
Q 017977          190 YCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDD  268 (363)
Q Consensus       190 ~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D  268 (363)
                      |..+|.+...++++       ....+. .+|+++..|.||.+..+.......-.... ......|++      .+..++|
T Consensus       158 Y~asKaal~~lt~~-------lA~e~~-~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~------R~~~ped  223 (261)
T d1geea_         158 YAASKGGMKLMTET-------LALEYA-PKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMG------YIGEPEE  223 (261)
T ss_dssp             HHHHHHHHHHHHHH-------HHHHHG-GGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTS------SCBCHHH
T ss_pred             cccCCccchhhHHH-------HHHHhh-hhCcEEEEEeeCcCcCHhHhhhcCCHHHHHHHHhcCCCC------CCCCHHH
Confidence            76666554444321       111122 23899999999998765321100000111 122222332      2678999


Q ss_pred             HHHHHHHHhcCCC--CCc-eEEeeCCCC
Q 017977          269 IVNLIYEALSNPS--YRG-VINGTAPNP  293 (363)
Q Consensus       269 ~a~a~~~~~~~~~--~~g-~~~i~~~~~  293 (363)
                      +|++++.++....  ..| ++.+.+|..
T Consensus       224 iA~~v~fL~S~~s~~itG~~i~vDGG~s  251 (261)
T d1geea_         224 IAAVAAWLASSEASYVTGITLFADGGMT  251 (261)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHHhCchhcCCcCCeEEECCCee
Confidence            9999999986543  445 777777643

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=99.80  E-value=2e-19  Score=152.09  Aligned_cols=219  Identities=14%  Similarity=0.047  Sum_probs=145.6

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc-------CCCEEE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV  121 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~Vi  121 (363)
                      .+|++|||||++.||+++++.|+++|++|.+.+|+.+..+..... . .....+|+.|.++++++++       ++|++|
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~-~-~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLV   81 (248)
T d2d1ya1           4 AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAI-G-GAFFQVDLEDERERVRFVEEAAYALGRVDVLV   81 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHHHH-T-CEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHc-C-CeEEEEeCCCHHHHHHHHHHHHHhcCCCCeEE
Confidence            457999999999999999999999999999999987653322111 1 1145689999888776654       689999


Q ss_pred             EccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhhhhh
Q 017977          122 NLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYC  196 (363)
Q Consensus       122 ~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~  196 (363)
                      |+||.....   ..+.+..+..+++|+.++.++.+++.+.  ..+..++|++||..+..+       .+....|..+|.+
T Consensus        82 nnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~-------~~~~~~Y~asKaa  154 (248)
T d2d1ya1          82 NNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFA-------EQENAAYNASKGG  154 (248)
T ss_dssp             ECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSB-------CTTBHHHHHHHHH
T ss_pred             EeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccccccccccccccccccccc-------ccccchhHHHHHH
Confidence            999975442   3356778889999999999888888754  244567999999854322       3344566666544


Q ss_pred             cccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCc-------ccchHHHHHHHhCCCCCCCCCccccccHHHH
Q 017977          197 LVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA-------LAKMIPLFMMFAGGPLGSGQQWFSWIHLDDI  269 (363)
Q Consensus       197 ~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  269 (363)
                      ...++++       ....+. .+|+++..|.||.+-.+....       ......  ......|+      ..+...+|+
T Consensus       155 l~~ltk~-------lA~el~-~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~--~~~~~~pl------~R~~~pedi  218 (248)
T d2d1ya1         155 LVNLTRS-------LALDLA-PLRIRVNAVAPGAIATEAVLEAIALSPDPERTRR--DWEDLHAL------RRLGKPEEV  218 (248)
T ss_dssp             HHHHHHH-------HHHHHG-GGTEEEEEEEECSBCCHHHHHHHC--------CH--HHHTTSTT------SSCBCHHHH
T ss_pred             HHHHHHH-------HHHHhh-hhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHH--HHHhcCCC------CCCcCHHHH
Confidence            4333321       111112 238999999999886542100       000000  11111222      236789999


Q ss_pred             HHHHHHHhcCCC--CCc-eEEeeCCC
Q 017977          270 VNLIYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       270 a~a~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      |+++..++....  ..| .+.+.+|-
T Consensus       219 a~~v~fL~S~~s~~itG~~i~vDGG~  244 (248)
T d2d1ya1         219 AEAVLFLASEKASFITGAILPVDGGM  244 (248)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHhCchhcCCCCcEEEcCcCc
Confidence            999999986543  455 78877764

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.80  E-value=2.1e-19  Score=152.61  Aligned_cols=222  Identities=15%  Similarity=0.094  Sum_probs=149.1

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCccccc----CCCCCccccCcccccCcchHHhhcc-------C
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (363)
                      ..+|+++||||++.||+++++.|+++|++|++++|+.++.+..    ...........+|+.++++++++++       +
T Consensus         9 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~   88 (255)
T d1fmca_           9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGK   88 (255)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            3457999999999999999999999999999999987654332    2222223355689999988776653       6


Q ss_pred             CCEEEEccCCCCCC--CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhh
Q 017977          117 STAVVNLAGTPIGT--RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCA  192 (363)
Q Consensus       117 ~d~Vi~~a~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~  192 (363)
                      +|++||+||.....  ..+.+..+..+++|+.++..+.+++.+.  ..+..++|++||.++..+       .+....|..
T Consensus        89 iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~-------~~~~~~Y~a  161 (255)
T d1fmca_          89 VDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENK-------NINMTSYAS  161 (255)
T ss_dssp             CCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCC-------CTTCHHHHH
T ss_pred             CCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhcc-------ccccccchh
Confidence            89999999975442  3456778889999999988887766543  134456889998744222       334456777


Q ss_pred             hhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCC-Ccc-cchHHHHHHHhCCCCCCCCCccccccHHHHH
Q 017977          193 KVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDG-GAL-AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIV  270 (363)
Q Consensus       193 ~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  270 (363)
                      +|.+...++++  ++.+     +. .+|+++..|.||.+..+.. ... .....  ......|++      .+..++|+|
T Consensus       162 sKaal~~lt~~--lA~e-----l~-~~gIrVN~I~PG~i~T~~~~~~~~~e~~~--~~~~~~pl~------R~g~pedvA  225 (255)
T d1fmca_         162 SKAAASHLVRN--MAFD-----LG-EKNIRVNGIAPGAILTDALKSVITPEIEQ--KMLQHTPIR------RLGQPQDIA  225 (255)
T ss_dssp             HHHHHHHHHHH--HHHH-----HH-TTTEEEEEEEECSBCSHHHHTTCCHHHHH--HHHHTCSSC------SCBCHHHHH
T ss_pred             HHHHHHHHHHH--HHHH-----hC-ccCeEEEEeeeCcCcChHhhccCCHHHHH--HHHhcCCCC------CCcCHHHHH
Confidence            76555444432  1111     11 2489999999999876521 111 11111  222333433      267799999


Q ss_pred             HHHHHHhcCCC--CCc-eEEeeCCC
Q 017977          271 NLIYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       271 ~a~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      +++..++....  ..| ++.+.+|.
T Consensus       226 ~~v~fL~S~~s~~itG~~i~vDGG~  250 (255)
T d1fmca_         226 NAALFLCSPAASWVSGQILTVSGGG  250 (255)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             HHHHHHhCchhcCCcCCEEEECcCc
Confidence            99999986543  455 77777764

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.79  E-value=2.1e-19  Score=151.34  Aligned_cols=217  Identities=13%  Similarity=0.093  Sum_probs=146.7

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCC-CccccCcccccCcchHHhhcc-------CCCEE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK-KTRFFPGVMIAEEPQWRDCIQ-------GSTAV  120 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~-------~~d~V  120 (363)
                      +.++++||||++.||+++++.|+++|++|++++|++++.+.+.... .......+|+.|+++++++++       .+|++
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~idil   84 (244)
T d1nffa_           5 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVL   84 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCeEE
Confidence            4579999999999999999999999999999999887654432221 122245689999988876664       58999


Q ss_pred             EEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhhhh
Q 017977          121 VNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVY  195 (363)
Q Consensus       121 i~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~  195 (363)
                      ||+||.....   ..+.+..+..+++|+.++..+.+++.+.  ..+..++|++||..+..+       .+....|..+|.
T Consensus        85 innAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~-------~~~~~~Y~asKa  157 (244)
T d1nffa_          85 VNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAG-------TVACHGYTATKF  157 (244)
T ss_dssp             EECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-------CTTBHHHHHHHH
T ss_pred             EECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccc-------cccccchhhHHH
Confidence            9999975443   3356778889999999998888766442  134457999999854222       233456776665


Q ss_pred             hcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHHHH
Q 017977          196 CLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE  275 (363)
Q Consensus       196 ~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~  275 (363)
                      +...++++       ....+. .+|+++..|.||.+..+.......      .....|+      ..+..++|+|+++..
T Consensus       158 al~~ltk~-------lA~el~-~~gIrVN~I~PG~i~T~~~~~~~~------~~~~~pl------~R~~~p~diA~~v~f  217 (244)
T d1nffa_         158 AVRGLTKS-------TALELG-PSGIRVNSIHPGLVKTPMTDWVPE------DIFQTAL------GRAAEPVEVSNLVVY  217 (244)
T ss_dssp             HHHHHHHH-------HHHHHG-GGTEEEEEEEECCBCSGGGTTSCT------TCSCCSS------SSCBCHHHHHHHHHH
T ss_pred             HHHHHHHH-------HHHHhc-ccCEEEEEEeeCCccChhHhhhhH------HHHhccc------cCCCCHHHHHHHHHH
Confidence            54433321       111122 238999999999987653211100      0011111      237889999999999


Q ss_pred             HhcCCC--CCc-eEEeeCCC
Q 017977          276 ALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       276 ~~~~~~--~~g-~~~i~~~~  292 (363)
                      ++....  ..| ++.+.+|.
T Consensus       218 L~s~~s~~itG~~i~vDGG~  237 (244)
T d1nffa_         218 LASDESSYSTGAEFVVDGGT  237 (244)
T ss_dssp             HHSGGGTTCCSCEEEESTTG
T ss_pred             HhChhhCCCcCCEEEECCCe
Confidence            986443  455 77777663

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=99.79  E-value=4.3e-19  Score=150.08  Aligned_cols=224  Identities=13%  Similarity=0.065  Sum_probs=143.1

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccc--cCCCCCccccCcccccCcchHHhhcc-------CCCE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL--IFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTA  119 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~  119 (363)
                      +.+.++||||++.||+++++.|+++|++|++.+|++.+...  ............+|+.|.++++++++       ++|+
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iDi   83 (247)
T d2ew8a1           4 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDI   83 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            45799999999999999999999999999999998754221  11222223355689999988877654       6899


Q ss_pred             EEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhhh
Q 017977          120 VVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKV  194 (363)
Q Consensus       120 Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~  194 (363)
                      +||+||.....   ..+.+..+..+++|+.++..+.+++.+.  ..+..++|++||..+..+       .+....|..+|
T Consensus        84 lVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~-------~~~~~~Y~asK  156 (247)
T d2ew8a1          84 LVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLK-------IEAYTHYISTK  156 (247)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSC-------CSSCHHHHHHH
T ss_pred             EEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhccc-------Ccccccchhhh
Confidence            99999975442   3456788899999999998888877653  134567999999854222       34445677776


Q ss_pred             hhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHHH
Q 017977          195 YCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY  274 (363)
Q Consensus       195 ~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~  274 (363)
                      .+...++++       ....+. .+|+++..|.||.+..+...... ...........    ......+..++|+|++++
T Consensus       157 aal~~ltk~-------lA~ela-~~gIrVN~I~PG~i~T~~~~~~~-~~~~~~~~~~~----~~~l~r~~~pedvA~~v~  223 (247)
T d2ew8a1         157 AANIGFTRA-------LASDLG-KDGITVNAIAPSLVRTATTEASA-LSAMFDVLPNM----LQAIPRLQVPLDLTGAAA  223 (247)
T ss_dssp             HHHHHHHHH-------HHHHHG-GGTEEEEEEEECCC-------------------CT----TSSSCSCCCTHHHHHHHH
T ss_pred             ccHHHHHHH-------HHHHhc-ccCeEEEEEeeCCCCCccccccc-cchhHHHHHHH----hccCCCCCCHHHHHHHHH
Confidence            554444321       111111 23899999999998766321100 00000000000    001113667899999999


Q ss_pred             HHhcCCC--CCc-eEEeeCCC
Q 017977          275 EALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       275 ~~~~~~~--~~g-~~~i~~~~  292 (363)
                      .++....  ..| ++.+.+|-
T Consensus       224 fL~S~~s~~itG~~i~vDGG~  244 (247)
T d2ew8a1         224 FLASDDASFITGQTLAVDGGM  244 (247)
T ss_dssp             HHTSGGGTTCCSCEEEESSSC
T ss_pred             HHhCchhcCCcCCeEEECCCE
Confidence            9986543  345 77777763

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=99.79  E-value=9.9e-20  Score=153.56  Aligned_cols=221  Identities=16%  Similarity=0.108  Sum_probs=148.2

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCC-CccccCcccccCcchHHhhcc-------CCCEE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK-KTRFFPGVMIAEEPQWRDCIQ-------GSTAV  120 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~-------~~d~V  120 (363)
                      +.++++||||++.||+++++.|+++|++|++++|+.+..+.+.... .......+|+.|.++++++++       ++|++
T Consensus         3 ~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil   82 (243)
T d1q7ba_           3 EGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDIL   82 (243)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCSEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCccee
Confidence            4579999999999999999999999999999999886654432211 112244689999888876664       68999


Q ss_pred             EEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhhhh
Q 017977          121 VNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVY  195 (363)
Q Consensus       121 i~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~  195 (363)
                      ||+|+.....   ..+.+..+..+++|+.++..+.+++.+.  ..+..++|++||..+..+       .+..+.|..+|.
T Consensus        83 VnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~-------~~~~~~Y~asKa  155 (243)
T d1q7ba_          83 VNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMG-------NGGQANYAAAKA  155 (243)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC-------CTTCHHHHHHHH
T ss_pred             hhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCC-------CCCCHHHHHHHH
Confidence            9999875442   3456678889999999999888887653  134467999999854322       234456777665


Q ss_pred             hcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHH-HHHhCCCCCCCCCccccccHHHHHHHHH
Q 017977          196 CLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIY  274 (363)
Q Consensus       196 ~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~a~~  274 (363)
                      +...++++       ....+. .+|+++..+.||.+-.+.....  .-... ......|++      .+...+|+|+++.
T Consensus       156 al~~lt~~-------lA~ela-~~gIrVN~I~PG~i~T~~~~~~--~~~~~~~~~~~~pl~------R~~~pedvA~~v~  219 (243)
T d1q7ba_         156 GLIGFSKS-------LAREVA-SRGITVNVVAPGFIETDMTRAL--SDDQRAGILAQVPAG------RLGGAQEIANAVA  219 (243)
T ss_dssp             HHHHHHHH-------HHHHHG-GGTEEEEEEEECSBCCHHHHTS--CHHHHHHHHTTCTTS------SCBCHHHHHHHHH
T ss_pred             HHHHHHHH-------HHHHhC-ccCeEEEEEecceEechhhhhh--hhhHHHHHHhcCCCC------CCCCHHHHHHHHH
Confidence            54433321       111111 2389999999998865421110  00111 222233332      2678999999999


Q ss_pred             HHhcCCC--CCc-eEEeeCCC
Q 017977          275 EALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       275 ~~~~~~~--~~g-~~~i~~~~  292 (363)
                      .++....  ..| .+.+.+|-
T Consensus       220 fL~S~~s~~itGq~i~vdGG~  240 (243)
T d1q7ba_         220 FLASDEAAYITGETLHVNGGM  240 (243)
T ss_dssp             HHHSGGGTTCCSCEEEESTTS
T ss_pred             HHhCchhcCCcCCeEEECCCe
Confidence            9996543  345 77777764

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.79  E-value=5e-19  Score=149.92  Aligned_cols=223  Identities=16%  Similarity=0.054  Sum_probs=147.6

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCC-----CCCccccCcccccCcchHHhhcc-------C
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP-----GKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (363)
                      +.++++||||++.||+++++.|+++|++|++++|+.++..+...     .........+|+.|.++++++++       +
T Consensus         4 ~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   83 (251)
T d1vl8a_           4 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGK   83 (251)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            45799999999999999999999999999999998765432211     11112245689999988877664       6


Q ss_pred             CCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchh
Q 017977          117 STAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYC  191 (363)
Q Consensus       117 ~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~  191 (363)
                      +|++||+||.....   ..+.+..+..+++|+.++..+.+++.+.  ..+..++|+++|..+...      ..+....|.
T Consensus        84 iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~------~~~~~~~Y~  157 (251)
T d1vl8a_          84 LDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEV------TMPNISAYA  157 (251)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCC------CSSSCHHHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccc------cCccccchH
Confidence            89999999975442   2466778899999999999888887654  245567999988632110      122234677


Q ss_pred             hhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHH-HHHhCCCCCCCCCccccccHHHHH
Q 017977          192 AKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIV  270 (363)
Q Consensus       192 ~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a  270 (363)
                      .+|.+...++++       ....+. .+|+++..|.||.+-.+.......-.... ......|++      .+..++|+|
T Consensus       158 asKaal~~lt~~-------lA~e~~-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~------R~~~pedvA  223 (251)
T d1vl8a_         158 ASKGGVASLTKA-------LAKEWG-RYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLG------RTGVPEDLK  223 (251)
T ss_dssp             HHHHHHHHHHHH-------HHHHHG-GGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTS------SCBCGGGGH
T ss_pred             HHHHhHHHHHHH-------HHHHhc-ccCeEEEEEeeCcccCHHHHhccCCHHHHHHHHhcCCCC------CCCCHHHHH
Confidence            766554444332       111112 23899999999999776432110001111 223333433      256789999


Q ss_pred             HHHHHHhcCCC--CCc-eEEeeCC
Q 017977          271 NLIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       271 ~a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      ++++.++....  ..| ++.+.+|
T Consensus       224 ~~v~fL~S~~a~~itG~~i~vDGG  247 (251)
T d1vl8a_         224 GVAVFLASEEAKYVTGQIIFVDGG  247 (251)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHhCchhCCCcCcEEEeCcC
Confidence            99999886543  445 7777665

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=99.79  E-value=6.8e-19  Score=149.20  Aligned_cols=224  Identities=14%  Similarity=0.060  Sum_probs=145.3

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccC---CCCCccccCcccccCcchHHhhcc-------CCC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF---PGKKTRFFPGVMIAEEPQWRDCIQ-------GST  118 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~d~~~~~~~~~~~~-------~~d  118 (363)
                      +.++++||||++.||+++++.|+++|++|++++|+.+..+...   ..........+|+.|.+++.++++       ++|
T Consensus         5 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD   84 (251)
T d1zk4a1           5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVS   84 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCce
Confidence            4579999999999999999999999999999999876543321   112223355689999988776654       689


Q ss_pred             EEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCC-CCeEEEeccceecCCcccccccCCCcchhh
Q 017977          119 AVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGV-RPSVLELVKPKYLMRAAHQEMITWLSDYCA  192 (363)
Q Consensus       119 ~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~-~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~  192 (363)
                      ++||+||.....   ..+.+..+..+++|+.++..+.+++.+.  ..+. .++|++||..+..+       .+....|..
T Consensus        85 iLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~-------~~~~~~Y~a  157 (251)
T d1zk4a1          85 TLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVG-------DPSLGAYNA  157 (251)
T ss_dssp             EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSC-------CTTCHHHHH
T ss_pred             EEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceecc-------CCCchhHHH
Confidence            999999975442   3456677889999999999988887653  1332 36899998854222       333446666


Q ss_pred             hhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHH
Q 017977          193 KVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL  272 (363)
Q Consensus       193 ~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a  272 (363)
                      +|.+...++++      +..+.....+|+++..|.||.+..+.......-..........|+      ..+..++|+|++
T Consensus       158 sKaal~~lt~~------lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~pl------~R~~~pedvA~~  225 (251)
T d1zk4a1         158 SKGAVRIMSKS------AALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPM------GHIGEPNDIAYI  225 (251)
T ss_dssp             HHHHHHHHHHH------HHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHHTSTTTCTT------SSCBCHHHHHHH
T ss_pred             HHHHHhcchHH------HHHHHhcCCCcEEEEEEeCCCCCChhHHhcCCHHHHHHHHhCCCC------CCCcCHHHHHHH
Confidence            65443333321      111111123599999999999875421110000000011111122      136789999999


Q ss_pred             HHHHhcCCC--CCc-eEEeeCC
Q 017977          273 IYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       273 ~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      +..++....  ..| .+.+.+|
T Consensus       226 v~fL~S~~s~~itG~~i~vDGG  247 (251)
T d1zk4a1         226 CVYLASNESKFATGSEFVVDGG  247 (251)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHhCchhCCCcCcEEEECcc
Confidence            999986543  445 7777665

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=99.79  E-value=2.5e-19  Score=152.50  Aligned_cols=223  Identities=14%  Similarity=0.117  Sum_probs=148.8

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCC-CCccccCcccccCcchHHhhcc-------CCCEE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTAV  120 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~d~V  120 (363)
                      +.++++||||++.||+++++.|+++|++|++++|+.++.+..... ........+|+.|.++++++++       .+|++
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDil   83 (256)
T d1k2wa_           4 DGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSIDIL   83 (256)
T ss_dssp             TTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCccEE
Confidence            457999999999999999999999999999999987665433221 1122245689999998887664       68999


Q ss_pred             EEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC---CCCCCCeEEEeccceecCCcccccccCCCcchhhhh
Q 017977          121 VNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES---PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKV  194 (363)
Q Consensus       121 i~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~  194 (363)
                      ||+||.....   ..+.+..+..+++|+.++..+.+++.+.   .....++|++||.++..+       .+....|..+|
T Consensus        84 VnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~-------~~~~~~Y~asK  156 (256)
T d1k2wa_          84 VNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRG-------EALVGVYCATK  156 (256)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC-------CTTCHHHHHHH
T ss_pred             EeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccc-------cccccchhhhh
Confidence            9999975432   3356778889999999998888765432   123457999999854222       33345676665


Q ss_pred             hhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHH-------------HHHhCCCCCCCCCcc
Q 017977          195 YCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF-------------MMFAGGPLGSGQQWF  261 (363)
Q Consensus       195 ~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~  261 (363)
                      .+...++++       ....+. .+|+++..|.||.+-.+....   +....             ......|++      
T Consensus       157 aal~~lt~~-------lA~el~-~~gIrVN~V~PG~i~T~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~Plg------  219 (256)
T d1k2wa_         157 AAVISLTQS-------AGLNLI-RHGINVNAIAPGVVDGEHWDG---VDAKFADYENLPRGEKKRQVGAAVPFG------  219 (256)
T ss_dssp             HHHHHHHHH-------HHHHHG-GGTEEEEEEEECCBCCTTHHH---HHHHHHHHHTCCTTHHHHHHHHHSTTS------
T ss_pred             hHHHHHHHH-------HHHHhc-ccCeEEEEEecCCCCchhhhh---hhhhhhhhccCChHHHHHHHHhcCCCC------
Confidence            544433321       111112 238999999999888764211   11111             111112222      


Q ss_pred             ccccHHHHHHHHHHHhcCCC--CCc-eEEeeCCCCcC
Q 017977          262 SWIHLDDIVNLIYEALSNPS--YRG-VINGTAPNPVR  295 (363)
Q Consensus       262 ~~i~v~D~a~a~~~~~~~~~--~~g-~~~i~~~~~~s  295 (363)
                      .+...+|+|+++..++....  ..| ++.+.+|..++
T Consensus       220 R~~~p~evA~~v~fL~S~~a~~iTG~~i~vDGG~~ms  256 (256)
T d1k2wa_         220 RMGRAEDLTGMAIFLATPEADYIVAQTYNVDGGNWMS  256 (256)
T ss_dssp             SCBCHHHHHHHHHHTTSGGGTTCCSCEEEESTTSSCC
T ss_pred             CCcCHHHHHHHHHHHhCchhCCccCceEEECcchhhC
Confidence            26789999999999886443  345 78888876543

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.79  E-value=5.6e-19  Score=149.73  Aligned_cols=220  Identities=15%  Similarity=0.147  Sum_probs=147.5

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccc----cCCCCCccccCcccccCcchHHhhcc-------CC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL----IFPGKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (363)
                      ..|.++||||++.||+++++.|+++|++|++++|+.+..+.    +...........+|+.|.+++.++++       .+
T Consensus         9 enKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~i   88 (251)
T d2c07a1           9 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNV   88 (251)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Confidence            34789999999999999999999999999999998765432    22222223355689999988877664       68


Q ss_pred             CEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhh
Q 017977          118 TAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCA  192 (363)
Q Consensus       118 d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~  192 (363)
                      |++||+|+.....   ....+..+..+++|+.++..+.+++.+.  ..+..++|++||..+..+       .+....|..
T Consensus        89 Dilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~-------~~~~~~Y~a  161 (251)
T d2c07a1          89 DILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTG-------NVGQANYSS  161 (251)
T ss_dssp             CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC-------CTTCHHHHH
T ss_pred             eeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCC-------CCCCHHHHH
Confidence            9999999975442   2355678889999999988888766543  144567999999854332       344456777


Q ss_pred             hhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc-cchHHHHHHHhCCCCCCCCCccccccHHHHHH
Q 017977          193 KVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVN  271 (363)
Q Consensus       193 ~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  271 (363)
                      +|.+...++++  ++.+     +. .+|+++..|.||.+-.+..... .....  ......|++      .+...+|+|+
T Consensus       162 sKaal~~ltr~--lA~e-----l~-~~gIrVN~V~PG~v~T~~~~~~~~~~~~--~~~~~~pl~------R~~~pedvA~  225 (251)
T d2c07a1         162 SKAGVIGFTKS--LAKE-----LA-SRNITVNAIAPGFISSDMTDKISEQIKK--NIISNIPAG------RMGTPEEVAN  225 (251)
T ss_dssp             HHHHHHHHHHH--HHHH-----HG-GGTEEEEEEEECSBCC-----CCHHHHH--HHHTTCTTS------SCBCHHHHHH
T ss_pred             HHHHHHHHHHH--HHHH-----hh-hhCeEEEEEccCCEecccccccCHHHHH--HHHhcCCCC------CCcCHHHHHH
Confidence            76555444432  1111     11 2389999999999987643221 11111  222233332      2678999999


Q ss_pred             HHHHHhcCCC--CCc-eEEeeCC
Q 017977          272 LIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       272 a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      ++..++....  ..| ++.+.+|
T Consensus       226 ~v~fL~S~~s~~itG~~i~vDGG  248 (251)
T d2c07a1         226 LACFLSSDKSGYINGRVFVIDGG  248 (251)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHhCchhCCCcCcEEEECCC
Confidence            9999986544  445 7777665

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=1.9e-19  Score=153.15  Aligned_cols=224  Identities=16%  Similarity=0.132  Sum_probs=146.3

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCccccc----CCC--CCccccCcccccCcchHHhhcc-------
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI----FPG--KKTRFFPGVMIAEEPQWRDCIQ-------  115 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~--~~~~~~~~~d~~~~~~~~~~~~-------  115 (363)
                      ++|++|||||++.||+++++.|+++|++|++++|+.++.+..    ...  ........+|+.|.++++++++       
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   81 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG   81 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            457999999999999999999999999999999987653322    111  1122244689999988877664       


Q ss_pred             CCCEEEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhC-C-CC---CCCeEEEeccceecCCcccccccCCCcch
Q 017977          116 GSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES-P-EG---VRPSVLELVKPKYLMRAAHQEMITWLSDY  190 (363)
Q Consensus       116 ~~d~Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~~---~~~~v~~SS~~~~yg~~~~~e~~~~~~~~  190 (363)
                      ++|++||+|+..     .....+..+++|+.++.++..++.+. . ..   ..++|++||.++..+       .+..+.|
T Consensus        82 ~iDilVnnAg~~-----~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~-------~~~~~~Y  149 (254)
T d2gdza1          82 RLDILVNNAGVN-----NEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMP-------VAQQPVY  149 (254)
T ss_dssp             CCCEEEECCCCC-----CSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC-------CTTCHHH
T ss_pred             CcCeeccccccc-----ccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccC-------CCCccch
Confidence            689999999974     23446788999999888777766543 1 11   234999999854332       3344567


Q ss_pred             hhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCc---------ccchHHHHHHHhCCCCCCCCCcc
Q 017977          191 CAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA---------LAKMIPLFMMFAGGPLGSGQQWF  261 (363)
Q Consensus       191 ~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~  261 (363)
                      ..+|.+...++++-.+..      .....|+++..|.||.+-.+....         .......+  ....|+      .
T Consensus       150 ~asKaal~~ltrs~ala~------e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~--~~~~p~------~  215 (254)
T d2gdza1         150 CASKHGIVGFTRSAALAA------NLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHI--KDMIKY------Y  215 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHH------HHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHH--HHHHHH------H
T ss_pred             HHHHHHHHHHHHHHHHHH------HhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHH--HhcCCC------C
Confidence            777655444443211111      112248999999999886541100         00111111  000011      1


Q ss_pred             ccccHHHHHHHHHHHhcCCCCCc-eEEeeCCCCcCHHH
Q 017977          262 SWIHLDDIVNLIYEALSNPSYRG-VINGTAPNPVRLAE  298 (363)
Q Consensus       262 ~~i~v~D~a~a~~~~~~~~~~~g-~~~i~~~~~~s~~e  298 (363)
                      .+...+|+|++++.++++....| ++.+.+|..+.++|
T Consensus       216 r~~~pedvA~~v~fL~s~~~itG~~i~VdGG~~~~~~~  253 (254)
T d2gdza1         216 GILDPPLIANGLITLIEDDALNGAIMKITTSKGIHFQD  253 (254)
T ss_dssp             CCBCHHHHHHHHHHHHHCTTCSSCEEEEETTTEEEECC
T ss_pred             CCcCHHHHHHHHHHHHcCCCCCCCEEEECCCCeeeccc
Confidence            25679999999999998766555 88888887665543

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=99.78  E-value=7.4e-19  Score=148.85  Aligned_cols=222  Identities=14%  Similarity=0.103  Sum_probs=146.4

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCC-CccccCcccccCcchHHhhcc-------CCCEE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK-KTRFFPGVMIAEEPQWRDCIQ-------GSTAV  120 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~-------~~d~V  120 (363)
                      ++|+++||||++.||++++++|+++|++|++++|+.++........ .......+|+.+.++++++++       .+|++
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil   83 (254)
T d1hdca_           4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGL   83 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCccEE
Confidence            4579999999999999999999999999999999887655433222 223355689999988877664       68999


Q ss_pred             EEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhhhh
Q 017977          121 VNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVY  195 (363)
Q Consensus       121 i~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~  195 (363)
                      ||+||.....   ....+..+..+++|+.++..+.+++.+.  ..+..++|++||..+..+       .+....|..+|.
T Consensus        84 VnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~-------~~~~~~Y~asKa  156 (254)
T d1hdca_          84 VNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMG-------LALTSSYGASKW  156 (254)
T ss_dssp             EECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-------CTTCHHHHHHHH
T ss_pred             EecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhccc-------ccchhhHHHHHH
Confidence            9999975442   3455677889999999998888877543  134567999999854332       333456777665


Q ss_pred             hcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCcccc-ccHHHHHHHHH
Q 017977          196 CLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSW-IHLDDIVNLIY  274 (363)
Q Consensus       196 ~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~v~D~a~a~~  274 (363)
                      +...++++       ....+. ..|+++..|.||.+..+.       .........+..........+ ..++|+|++++
T Consensus       157 al~~lt~~-------lA~e~a-~~gIrVN~I~PG~v~T~~-------~~~~~~~~~~~~~~~~pl~R~g~~PedvA~~v~  221 (254)
T d1hdca_         157 GVRGLSKL-------AAVELG-TDRIRVNSVHPGMTYTPM-------TAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVV  221 (254)
T ss_dssp             HHHHHHHH-------HHHHHG-GGTEEEEEEEECSBCCHH-------HHHHTCCCSTTSCTTSTTSSCB-CHHHHHHHHH
T ss_pred             HHHHHHHH-------HHHHhC-CCceEEEEeeeCcccCcc-------chhcCHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence            54444332       111112 238999999999886531       111100000000000000112 35899999999


Q ss_pred             HHhcCCC--CCc-eEEeeCCC
Q 017977          275 EALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       275 ~~~~~~~--~~g-~~~i~~~~  292 (363)
                      .++....  ..| ++.+.+|-
T Consensus       222 fL~S~~a~~itG~~i~vDGG~  242 (254)
T d1hdca_         222 KLLSDTSSYVTGAELAVDGGW  242 (254)
T ss_dssp             HHHSGGGTTCCSCEEEESTTT
T ss_pred             HHhchhhCCCCCceEEeCCCc
Confidence            9986543  445 78887764

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=99.77  E-value=1.2e-18  Score=148.09  Aligned_cols=224  Identities=14%  Similarity=0.088  Sum_probs=147.8

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccC------CCCCccccCcccccCcchHHhhcc-------
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF------PGKKTRFFPGVMIAEEPQWRDCIQ-------  115 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~------~~~~~~~~~~~d~~~~~~~~~~~~-------  115 (363)
                      ..|+++||||++.||+++++.|+++|++|.+++|+.++.+...      ..........+|+.|.++++++++       
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G   82 (258)
T d1iy8a_           3 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG   82 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHhC
Confidence            3579999999999999999999999999999999876543221      111122244689999988877664       


Q ss_pred             CCCEEEEccCCCCC-C---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcc
Q 017977          116 GSTAVVNLAGTPIG-T---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSD  189 (363)
Q Consensus       116 ~~d~Vi~~a~~~~~-~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~  189 (363)
                      ++|++||+||.... .   ..+.+..+..+++|+.++..+.+++.+.  ..+..++|++||.++..+       .+....
T Consensus        83 ~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~-------~~~~~~  155 (258)
T d1iy8a_          83 RIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRG-------IGNQSG  155 (258)
T ss_dssp             CCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSB-------CSSBHH
T ss_pred             CCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccC-------CCCchH
Confidence            68999999996432 1   3456778899999999999888876543  145567999999854332       334456


Q ss_pred             hhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc------cchHHHH-HHHhCCCCCCCCCccc
Q 017977          190 YCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL------AKMIPLF-MMFAGGPLGSGQQWFS  262 (363)
Q Consensus       190 ~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~------~~~~~~~-~~~~~~~~~~~~~~~~  262 (363)
                      |..+|.+...++++       ....+. .+|+++..|.||.+..+.....      ....... ......|++      .
T Consensus       156 Y~asKaal~~lt~~-------lA~el~-~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl~------R  221 (258)
T d1iy8a_         156 YAAAKHGVVGLTRN-------SAVEYG-RYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSK------R  221 (258)
T ss_dssp             HHHHHHHHHHHHHH-------HHHHHG-GGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTC------S
T ss_pred             HHHHHHHHHHHHHH-------HHHHhC-ccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCCC------C
Confidence            77766554433321       111111 2389999999999875421000      0001111 122222332      2


Q ss_pred             cccHHHHHHHHHHHhcCCC--CCc-eEEeeCCCC
Q 017977          263 WIHLDDIVNLIYEALSNPS--YRG-VINGTAPNP  293 (363)
Q Consensus       263 ~i~v~D~a~a~~~~~~~~~--~~g-~~~i~~~~~  293 (363)
                      +...+|+|+++..++....  ..| ++.+.+|..
T Consensus       222 ~~~p~dvA~~v~fL~S~~s~~itG~~i~VDGG~s  255 (258)
T d1iy8a_         222 YGEAPEIAAVVAFLLSDDASYVNATVVPIDGGQS  255 (258)
T ss_dssp             CBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTT
T ss_pred             CcCHHHHHHHHHHHhCchhcCCcCceEEcCcchh
Confidence            6789999999999986543  445 788877753

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=99.77  E-value=6.1e-19  Score=150.52  Aligned_cols=222  Identities=13%  Similarity=0.084  Sum_probs=142.7

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCc-ccccC----C-CCCccccCcccccCcchHHhhcc-------
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK-AELIF----P-GKKTRFFPGVMIAEEPQWRDCIQ-------  115 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~----~-~~~~~~~~~~d~~~~~~~~~~~~-------  115 (363)
                      ++|++|||||++.||+++++.|+++|++|++.+|+..+ .+...    . .........+|+.|.++++++++       
T Consensus         3 ~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   82 (260)
T d1x1ta1           3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG   82 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred             CcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            45789999999999999999999999999999998643 22111    1 11122345689999998887764       


Q ss_pred             CCCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcch
Q 017977          116 GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDY  190 (363)
Q Consensus       116 ~~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~  190 (363)
                      ++|++||+||.....   ..+.+..+..+++|+.++..+.+++.+.  ..+..++|++||.++..+       .+....|
T Consensus        83 ~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~-------~~~~~~Y  155 (260)
T d1x1ta1          83 RIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVA-------SANKSAY  155 (260)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-------CTTCHHH
T ss_pred             CCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceec-------cCCcchh
Confidence            589999999975443   3456778899999999988877776543  134457999999854332       3344566


Q ss_pred             hhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc-cchHHHH----------HHHhCCCCCCCCC
Q 017977          191 CAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL-AKMIPLF----------MMFAGGPLGSGQQ  259 (363)
Q Consensus       191 ~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~-~~~~~~~----------~~~~~~~~~~~~~  259 (363)
                      ..+|.+...++++       ....+. ..|+.+..|.||.+-.+..... .......          ......|+     
T Consensus       156 ~asKaal~~lt~~-------lA~el~-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl-----  222 (260)
T d1x1ta1         156 VAAKHGVVGFTKV-------TALETA-GQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPS-----  222 (260)
T ss_dssp             HHHHHHHHHHHHH-------HHHHHT-TTTEEEEEEEECCBCC------------------------CHHHHCTT-----
T ss_pred             hhhhhhHHHhHHH-------HHHHhc-hhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcCCC-----
Confidence            6665444333321       111111 2489999999999876532110 0000000          00111122     


Q ss_pred             ccccccHHHHHHHHHHHhcCCC--CCc-eEEeeCC
Q 017977          260 WFSWIHLDDIVNLIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       260 ~~~~i~v~D~a~a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                       ..+..++|+|++++.++....  ..| ++.+.+|
T Consensus       223 -~R~g~pediA~~v~fL~S~~a~~itG~~i~vDGG  256 (260)
T d1x1ta1         223 -LQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGG  256 (260)
T ss_dssp             -CCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -CCCcCHHHHHHHHHHHhChhhCCCcCCEEEECcc
Confidence             136789999999999986543  445 7777665

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.77  E-value=2.4e-18  Score=146.31  Aligned_cols=218  Identities=16%  Similarity=0.097  Sum_probs=143.2

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCccccc----CCCCCccccCcccccCcchHHhhcc-------CCCE
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTA  119 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~  119 (363)
                      |.++||||++.||+++++.|+++|++|++.+|++++.+..    ...........+|+.|.+++.++++       ++|+
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   81 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV   81 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence            3469999999999999999999999999999987664432    1222223345689999988877654       6899


Q ss_pred             EEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC---CCCCCCeEEEeccceecCCcccccccCCCcchhhh
Q 017977          120 VVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES---PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAK  193 (363)
Q Consensus       120 Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~  193 (363)
                      +||+||.....   ..+.+..+..+++|+.++..+.+++.+.   ......+|++||.++..+       .+..+.|..+
T Consensus        82 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~-------~~~~~~Y~as  154 (255)
T d1gega_          82 IVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVG-------NPELAVYSSS  154 (255)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC-------CTTBHHHHHH
T ss_pred             EEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhccc-------CcccccchhC
Confidence            99999975442   3456778889999999999888876541   123455888888744222       3344566666


Q ss_pred             hhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHH-------------HHHhCCCCCCCCCc
Q 017977          194 VYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF-------------MMFAGGPLGSGQQW  260 (363)
Q Consensus       194 ~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~  260 (363)
                      |.+...++++       ....+. .+|+++..|.||.+-.+..   ..+....             ......|++     
T Consensus       155 Kaal~~ltk~-------lA~el~-~~gIrVN~I~PG~i~T~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~pl~-----  218 (255)
T d1gega_         155 KFAVRGLTQT-------AARDLA-PLGITVNGYCPGIVKTPMW---AEIDRQVSEAAGKPLGYGTAEFAKRITLG-----  218 (255)
T ss_dssp             HHHHHHHHHH-------HHHHHG-GGTEEEEEEEECSBSSHHH---HHHHHHHHHHHTCCTTHHHHHHHTTCTTC-----
T ss_pred             HHHHHhhHHH-------HHHHhh-hhCcEEEEEecCcccChHH---hhhhhhhHhhhcccchhHHHHHHhcCCCC-----
Confidence            5444333321       111111 2389999999998865421   1111111             112222222     


Q ss_pred             cccccHHHHHHHHHHHhcCCC--CCc-eEEeeCCC
Q 017977          261 FSWIHLDDIVNLIYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       261 ~~~i~v~D~a~a~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                       .+..++|+|++++.++....  ..| ++.+.+|-
T Consensus       219 -R~~~peevA~~v~fL~S~~a~~itG~~i~vDGG~  252 (255)
T d1gega_         219 -RLSEPEDVAACVSYLASPDSDYMTGQSLLIDGGM  252 (255)
T ss_dssp             -SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSS
T ss_pred             -CCcCHHHHHHHHHHHhCchhCCccCcEEEecCCE
Confidence             26789999999999996543  345 77777764

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.77  E-value=2.6e-18  Score=144.15  Aligned_cols=216  Identities=15%  Similarity=0.056  Sum_probs=139.5

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCc-chHHhhccCCCEEEEccCCC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEE-PQWRDCIQGSTAVVNLAGTP  127 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~d~Vi~~a~~~  127 (363)
                      +.|++|||||++.||+++++.|+++|++|++++|+.+..+.....     +..+|+.+. +.+.+.+.++|++||+||..
T Consensus         3 kgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~~~~~-----~~~~Dv~~~~~~~~~~~g~iD~lVnnAG~~   77 (234)
T d1o5ia_           3 RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHR-----YVVCDLRKDLDLLFEKVKEVDILVLNAGGP   77 (234)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHTCSE-----EEECCTTTCHHHHHHHSCCCSEEEECCCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHhcCCc-----EEEcchHHHHHHHHHHhCCCcEEEeccccc
Confidence            357999999999999999999999999999999987654443221     344677643 44555667899999999975


Q ss_pred             CCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhcccchh
Q 017977          128 IGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVSFNR  202 (363)
Q Consensus       128 ~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~~y~~  202 (363)
                      ...   ..+.+..+..+++|+.++..+.+++.+.  ..+..++|+++|.....       ..+....|..+|.+...+++
T Consensus        78 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~-------~~~~~~~Y~asKaal~~ltk  150 (234)
T d1o5ia_          78 KAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVIS-------PIENLYTSNSARMALTGFLK  150 (234)
T ss_dssp             CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS-------CCTTBHHHHHHHHHHHHHHH
T ss_pred             CCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccc-------cccccccchhHHHHHHHHHH
Confidence            442   3456677889999999988887776542  13445688888874311       12233455555444333332


Q ss_pred             hHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCc-ccchHHHHHHHhCCCCCCCCCccccccHHHHHHHHHHHhcCCC
Q 017977          203 GVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA-LAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS  281 (363)
Q Consensus       203 ~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~  281 (363)
                      +       ....+.. +|+++..|.||.+-.+.... .... ..-......|++      .+...+|+|+++..++....
T Consensus       151 ~-------lA~ela~-~gIrVN~I~PG~v~T~~~~~~~~~~-~~~~~~~~~pl~------R~~~pediA~~v~fL~S~~s  215 (234)
T d1o5ia_         151 T-------LSFEVAP-YGITVNCVAPGWTETERVKELLSEE-KKKQVESQIPMR------RMAKPEEIASVVAFLCSEKA  215 (234)
T ss_dssp             H-------HHHHHGG-GTEEEEEEEECSBCCTTHHHHSCHH-HHHHHHTTSTTS------SCBCHHHHHHHHHHHHSGGG
T ss_pred             H-------HHHHhcc-cCeEEeecccCccchhhhhhhcCHH-HHHHHHhcCCCC------CCcCHHHHHHHHHHHhChhh
Confidence            1       1111222 38999999999987664211 0000 001222223332      36789999999999986543


Q ss_pred             --CCc-eEEeeCC
Q 017977          282 --YRG-VINGTAP  291 (363)
Q Consensus       282 --~~g-~~~i~~~  291 (363)
                        ..| ++.+.+|
T Consensus       216 ~~itG~~i~vDGG  228 (234)
T d1o5ia_         216 SYLTGQTIVVDGG  228 (234)
T ss_dssp             TTCCSCEEEESTT
T ss_pred             cCCcCcEEEECcc
Confidence              345 7777665

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=99.77  E-value=1.1e-18  Score=148.68  Aligned_cols=222  Identities=13%  Similarity=0.058  Sum_probs=145.3

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccC----CCCCccccCcccccCcchHHhhcc--------C
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ--------G  116 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~--------~  116 (363)
                      ++|+++||||++.||+++++.|+++|++|++.+|+.++.+...    ..........+|+.|.++++++++        .
T Consensus         7 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~~   86 (259)
T d2ae2a_           7 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGK   86 (259)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCCC
Confidence            4579999999999999999999999999999999876644321    112222244689999887776542        4


Q ss_pred             CCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchh
Q 017977          117 STAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYC  191 (363)
Q Consensus       117 ~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~  191 (363)
                      +|++||+||.....   ..+.+..+..+++|+.++..+.+++.+.  ..+..++|++||..+..+       .+....|.
T Consensus        87 idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~-------~~~~~~Y~  159 (259)
T d2ae2a_          87 LNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALA-------VPYEAVYG  159 (259)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSC-------CTTCHHHH
T ss_pred             ceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccccc-------cccccchH
Confidence            79999999975442   3456678889999999998887776543  145567999999854222       23344566


Q ss_pred             hhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc-c--chHHHH-HHHhCCCCCCCCCccccccHH
Q 017977          192 AKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL-A--KMIPLF-MMFAGGPLGSGQQWFSWIHLD  267 (363)
Q Consensus       192 ~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~-~--~~~~~~-~~~~~~~~~~~~~~~~~i~v~  267 (363)
                      .+|.+...++++       ....+. .+|+++..|.||.+-.+..... .  ...... ......|++      .+..++
T Consensus       160 asKaal~~lt~~-------lA~el~-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl~------R~g~pe  225 (259)
T d2ae2a_         160 ATKGAMDQLTRC-------LAFEWA-KDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALR------RMGEPK  225 (259)
T ss_dssp             HHHHHHHHHHHH-------HHHHTG-GGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTC------SCBCHH
T ss_pred             HHHHHHHHHHHH-------HHHHhC-cCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCCC------CCcCHH
Confidence            665444333321       111111 2389999999999875421100 0  001111 222333433      267799


Q ss_pred             HHHHHHHHHhcCCC--CCc-eEEeeCC
Q 017977          268 DIVNLIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       268 D~a~a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      |+|++++.++....  ..| ++.+.+|
T Consensus       226 dvA~~v~fL~S~~s~~itG~~i~VDGG  252 (259)
T d2ae2a_         226 ELAAMVAFLCFPAASYVTGQIIYVDGG  252 (259)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHHhCchhCCCcCcEEEECCC
Confidence            99999999986543  445 6677665

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=99.76  E-value=1.9e-18  Score=147.32  Aligned_cols=222  Identities=14%  Similarity=0.074  Sum_probs=146.2

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCccccc----CCCCCccccCcccccCcchHHhhcc-------CC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (363)
                      +.++++||||++.||+++++.|+++|++|++++|+.+..+..    ...........+|+.|.++++++++       .+
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   83 (260)
T d1zema1           4 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKI   83 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            457999999999999999999999999999999987654322    2222223345689999988876664       68


Q ss_pred             CEEEEccCCCCC----CCCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchh
Q 017977          118 TAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYC  191 (363)
Q Consensus       118 d~Vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~  191 (363)
                      |++||+||....    ...+.+..+..+++|+.++..+.+++.+.  ..+..++|++||..+..+       .+....|.
T Consensus        84 DilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~-------~~~~~~Y~  156 (260)
T d1zema1          84 DFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKG-------PPNMAAYG  156 (260)
T ss_dssp             CEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSC-------CTTBHHHH
T ss_pred             CeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccC-------CcchHHHH
Confidence            999999996432    23466778899999999998888877543  134567999999854332       33345677


Q ss_pred             hhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCC-------------cccchHH-HH-HHHhCCCCCC
Q 017977          192 AKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGG-------------ALAKMIP-LF-MMFAGGPLGS  256 (363)
Q Consensus       192 ~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~-------------~~~~~~~-~~-~~~~~~~~~~  256 (363)
                      .+|.+...++++       ....+. .+|+++..|.||.|-.+...             ....... .. ......|++ 
T Consensus       157 asKaal~~ltk~-------lA~el~-~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~-  227 (260)
T d1zema1         157 TSKGAIIALTET-------AALDLA-PYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMR-  227 (260)
T ss_dssp             HHHHHHHHHHHH-------HHHHHG-GGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTS-
T ss_pred             HHHHHHHHHHHH-------HHHHhh-hhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcCCCC-
Confidence            766554444321       111112 23899999999998765210             0000000 01 112223332 


Q ss_pred             CCCccccccHHHHHHHHHHHhcCCC--CCc-eEEeeCC
Q 017977          257 GQQWFSWIHLDDIVNLIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       257 ~~~~~~~i~v~D~a~a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                           .+..++|+|+++..++....  ..| ++.+.+|
T Consensus       228 -----R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG  260 (260)
T d1zema1         228 -----RYGDINEIPGVVAFLLGDDSSFMTGVNLPIAGG  260 (260)
T ss_dssp             -----SCBCGGGSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred             -----CCcCHHHHHHHHHHHhCchhcCccCCeEEeCCC
Confidence                 26779999999999997543  344 6666553

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.76  E-value=6e-19  Score=150.17  Aligned_cols=221  Identities=13%  Similarity=0.077  Sum_probs=134.1

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccC----CCCCccccCcccccCcchHHhhcc--------C
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ--------G  116 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~--------~  116 (363)
                      ..|+++||||++.||+++++.|+++|++|++++|+..+.++..    ..........+|+.+.+++.++++        .
T Consensus         7 kgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~   86 (259)
T d1xq1a_           7 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGK   86 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCCC
Confidence            4579999999999999999999999999999999876644321    111122244579998887765542        3


Q ss_pred             CCEEEEccCCCCC---CCCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchh
Q 017977          117 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYC  191 (363)
Q Consensus       117 ~d~Vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~  191 (363)
                      +|++||+||....   ...+.+..+..+++|+.++..+.+++.+.  ..+..++|++||..+..+       .+....|.
T Consensus        87 idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~-------~~~~~~Y~  159 (259)
T d1xq1a_          87 LDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVS-------ASVGSIYS  159 (259)
T ss_dssp             CSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC-----------------CCHHH
T ss_pred             cccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhccccccccccccccccccccc-------cccccccc
Confidence            7999999997544   23456778899999999988888876543  135567999999854332       23345677


Q ss_pred             hhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc--cchHHHHHHHhCCCCCCCCCccccccHHHH
Q 017977          192 AKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL--AKMIPLFMMFAGGPLGSGQQWFSWIHLDDI  269 (363)
Q Consensus       192 ~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  269 (363)
                      .+|.+...++++       ....+. .+|+++..|.||.+-.+.....  .....  ......|+      ..+..++|+
T Consensus       160 asKaal~~lt~~-------lA~e~~-~~gIrVN~V~PG~i~T~~~~~~~~~~~~~--~~~~~~pl------~R~~~pedv  223 (259)
T d1xq1a_         160 ATKGALNQLARN-------LACEWA-SDGIRANAVAPAVIATPLAEAVYDDEFKK--VVISRKPL------GRFGEPEEV  223 (259)
T ss_dssp             HHHHHHHHHHHH-------HHHHHG-GGTCEEEEEECCSCC---------------------------------CCGGGG
T ss_pred             ccccchhhhhHH-------HHHHhc-ccCeEEEEeccCcccCHHhhhhchHHHHH--HHHhCCCC------CCCcCHHHH
Confidence            776554444332       111112 2389999999999876632110  00000  01111122      125679999


Q ss_pred             HHHHHHHhcCCC--CCc-eEEeeCCC
Q 017977          270 VNLIYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       270 a~a~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      |++++.++....  ..| .+.+.+|.
T Consensus       224 A~~v~fL~S~~s~~iTG~~i~vDGG~  249 (259)
T d1xq1a_         224 SSLVAFLCMPAASYITGQTICVDGGL  249 (259)
T ss_dssp             HHHHHHHTSGGGTTCCSCEEECCCCE
T ss_pred             HHHHHHHhCchhcCCcCcEEEeCCCE
Confidence            999999986443  345 67776653

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.76  E-value=9.7e-18  Score=143.63  Aligned_cols=223  Identities=12%  Similarity=0.082  Sum_probs=145.5

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccC---CCCCccccCcccccCcchHHhhcc-------CCC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF---PGKKTRFFPGVMIAEEPQWRDCIQ-------GST  118 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~d~~~~~~~~~~~~-------~~d  118 (363)
                      ..|++|||||++.||+++++.|+++|++|++++|+.++.+...   .......+..+|+.|.++++++++       .+|
T Consensus         5 ~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   84 (268)
T d2bgka1           5 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLD   84 (268)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCCcc
Confidence            4579999999999999999999999999999999876643321   111222245689999988877764       689


Q ss_pred             EEEEccCCCCCC-----CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCC-cch
Q 017977          119 AVVNLAGTPIGT-----RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWL-SDY  190 (363)
Q Consensus       119 ~Vi~~a~~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~-~~~  190 (363)
                      ++||+||.....     ..+.+..+..+++|+.++..+.+++.+.  ..+..++|++||..+..+       .+.. ..|
T Consensus        85 ~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~-------~~~~~~~Y  157 (268)
T d2bgka1          85 IMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTA-------GEGVSHVY  157 (268)
T ss_dssp             EEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCC-------CTTSCHHH
T ss_pred             eeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCcccccccccccc-------cccccccc
Confidence            999999964332     2345677889999999988888877653  244557899988754222       1222 246


Q ss_pred             hhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc-c---chHHHHHHHhCCCCCCCCCccccccH
Q 017977          191 CAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL-A---KMIPLFMMFAGGPLGSGQQWFSWIHL  266 (363)
Q Consensus       191 ~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~i~v  266 (363)
                      ..+|.+...++++       ....+. .+|+++..|.||.+-.+..... .   ............+.+      .+..+
T Consensus       158 ~asKaal~~lt~~-------lA~el~-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~g------r~~~p  223 (268)
T d2bgka1         158 TATKHAVLGLTTS-------LCTELG-EYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKG------TLLRA  223 (268)
T ss_dssp             HHHHHHHHHHHHH-------HHHHHG-GGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCS------CCCCH
T ss_pred             chhHHHHHhCHHH-------HHHHhC-hhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhccccCC------CCcCH
Confidence            6665444433321       111122 2389999999999987743211 1   111111111111111      26789


Q ss_pred             HHHHHHHHHHhcCCC--CCc-eEEeeCCC
Q 017977          267 DDIVNLIYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       267 ~D~a~a~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      +|+|++++.++....  ..| ++.+.+|-
T Consensus       224 edvA~~v~fL~S~~s~~itGq~i~VDGG~  252 (268)
T d2bgka1         224 EDVADAVAYLAGDESKYVSGLNLVIDGGY  252 (268)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHHHhChhhCCccCceEEECcCc
Confidence            999999999996543  445 77777764

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.76  E-value=1.8e-18  Score=146.70  Aligned_cols=226  Identities=15%  Similarity=0.084  Sum_probs=146.1

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCC-CCccccCcccccCcchHHhhcc-------CCCEE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTAV  120 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~d~V  120 (363)
                      +.|+++||||++.||+++++.|+++|++|++.+|+.+..+..... ........+|+.|.++++++++       .+|++
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDil   84 (253)
T d1hxha_           5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVL   84 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCeE
Confidence            457999999999999999999999999999999987664433221 1122244689998887776654       68999


Q ss_pred             EEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC-CCCCCCeEEEeccceecCCcccccccCCCcchhhhhhh
Q 017977          121 VNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYC  196 (363)
Q Consensus       121 i~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~  196 (363)
                      ||+||.....   ..+.+..+..+++|+.++..+.+++.+. +....++|++||..+..+       .+....|..+|.+
T Consensus        85 VnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~~~-------~~~~~~Y~asKaa  157 (253)
T d1hxha_          85 VNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLP-------IEQYAGYSASKAA  157 (253)
T ss_dssp             EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSC-------CTTBHHHHHHHHH
T ss_pred             EecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhhcC-------ccccccccchhHH
Confidence            9999975442   3456778899999999998888887764 333467999999854322       3334567666655


Q ss_pred             cccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCc-c-cchHHHHHHHhCCCCCCCCCccccccHHHHHHHHH
Q 017977          197 LVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA-L-AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY  274 (363)
Q Consensus       197 ~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~  274 (363)
                      ...++++  ++.+    .....+++++..|.||.+..+.... . .....  ........  ....-.+..++|+|++++
T Consensus       158 l~~lt~~--lA~e----~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~~--~~~~~~~~--~~~~gr~~~pedvA~~v~  227 (253)
T d1hxha_         158 VSALTRA--AALS----CRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSK--EMVLHDPK--LNRAGRAYMPERIAQLVL  227 (253)
T ss_dssp             HHHHHHH--HHHH----HHHHTCCEEEEEEEESEECCHHHHHHSCTTCCH--HHHBCBTT--TBTTCCEECHHHHHHHHH
T ss_pred             HHHHHHH--HHHH----HhhcCCCEEEEEEeECCCcCHhHHhhCcchhhH--HHHHhCcc--ccccCCCCCHHHHHHHHH
Confidence            4443332  1111    1122246999999999987542100 0 00000  00111100  011113678999999999


Q ss_pred             HHhcCCC--CCc-eEEeeCC
Q 017977          275 EALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       275 ~~~~~~~--~~g-~~~i~~~  291 (363)
                      .++....  ..| .+++.+|
T Consensus       228 fL~S~~s~~itG~~i~VDGG  247 (253)
T d1hxha_         228 FLASDESSVMSGSELHADNS  247 (253)
T ss_dssp             HHHSGGGTTCCSCEEEESSS
T ss_pred             HHhChhhCCCcCcEEEECcc
Confidence            9986543  445 6777665

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.75  E-value=1.7e-18  Score=147.45  Aligned_cols=221  Identities=17%  Similarity=0.180  Sum_probs=145.6

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCccccc----CCCCCccccCcccccCcchHHhhcc-------CCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------GST  118 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d  118 (363)
                      +|.+|||||++.||+++++.|+++|++|++++|+.+..+..    ...........+|+.|.++++++++       ++|
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iD   81 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVD   81 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            35789999999999999999999999999999987654332    1222223355689999988877664       589


Q ss_pred             EEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC----CCCCCCeEEEeccceecCCcccccccCCCcchh
Q 017977          119 AVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES----PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYC  191 (363)
Q Consensus       119 ~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~  191 (363)
                      ++|||||.....   ..+.+..+..+++|+.++..+.+++.+.    ..+..++|++||..+..+       .+....|.
T Consensus        82 ilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~-------~~~~~~Y~  154 (257)
T d2rhca1          82 VLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQG-------VVHAAPYS  154 (257)
T ss_dssp             EEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSC-------CTTCHHHH
T ss_pred             EEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccc-------cccchhHH
Confidence            999999975442   3456778899999999999999988652    123456888888854222       33445677


Q ss_pred             hhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCccc--------chHH-HH-HHHhCCCCCCCCCcc
Q 017977          192 AKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALA--------KMIP-LF-MMFAGGPLGSGQQWF  261 (363)
Q Consensus       192 ~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~--------~~~~-~~-~~~~~~~~~~~~~~~  261 (363)
                      .+|.+...++++       ....+. .+|+++..|.||.+-.+......        .... .. ......|++      
T Consensus       155 asKaal~~ltk~-------lA~el~-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~Plg------  220 (257)
T d2rhca1         155 ASKHGVVGFTKA-------LGLELA-RTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIG------  220 (257)
T ss_dssp             HHHHHHHHHHHH-------HHHHTT-TSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTTS------
T ss_pred             HHHHHHHHHHHH-------HHHHhh-hhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCCC------
Confidence            665544333321       111111 23899999999998654210000        0000 11 122222332      


Q ss_pred             ccccHHHHHHHHHHHhcCCC--CCc-eEEeeCC
Q 017977          262 SWIHLDDIVNLIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       262 ~~i~v~D~a~a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      .+..++|+|+++..++....  ..| ++.+.+|
T Consensus       221 R~~~pedia~~v~fL~S~~s~~itG~~i~vDGG  253 (257)
T d2rhca1         221 RYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGG  253 (257)
T ss_dssp             SCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             CCcCHHHHHHHHHHHhCchhcCCcCceEEECcC
Confidence            26789999999999996443  445 7777665

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.75  E-value=4.4e-18  Score=143.43  Aligned_cols=216  Identities=16%  Similarity=0.123  Sum_probs=142.6

Q ss_pred             EEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCC-ccccc----CCCCCccccCcccccCcchHHhhcc-------CCCE
Q 017977           52 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS-KAELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTA  119 (363)
Q Consensus        52 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~  119 (363)
                      .||||||++.||+++++.|+++|++|++.+++.. ..+..    ...........+|+.|.++++++++       ++|+
T Consensus         3 V~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   82 (244)
T d1edoa_           3 VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTIDV   82 (244)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCSE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCCc
Confidence            6999999999999999999999999998765443 32222    1111222245689999988876654       6899


Q ss_pred             EEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhhh
Q 017977          120 VVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKV  194 (363)
Q Consensus       120 Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~  194 (363)
                      +||+|+.....   ..+.+..+..+++|+.++..+.+++.+.  ..+..++|++||.++..+       .+....|..+|
T Consensus        83 LVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~-------~~~~~~Y~asK  155 (244)
T d1edoa_          83 VVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIG-------NIGQANYAAAK  155 (244)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC-------CTTCHHHHHHH
T ss_pred             cccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCC-------CCCCHHHHHHH
Confidence            99999975442   3466778899999999988887777653  135567999999854333       34445677776


Q ss_pred             hhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHH--HHHhCCCCCCCCCccccccHHHHHHH
Q 017977          195 YCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPLGSGQQWFSWIHLDDIVNL  272 (363)
Q Consensus       195 ~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~v~D~a~a  272 (363)
                      .+...++++  ++.++     . .+|+++..+.||.+-.+...   .+....  ......|++      .+..++|+|++
T Consensus       156 aal~~ltk~--lA~el-----~-~~gIrvN~I~PG~i~T~~~~---~~~~~~~~~~~~~~pl~------R~~~p~dvA~~  218 (244)
T d1edoa_         156 AGVIGFSKT--AAREG-----A-SRNINVNVVCPGFIASDMTA---KLGEDMEKKILGTIPLG------RTGQPENVAGL  218 (244)
T ss_dssp             HHHHHHHHH--HHHHH-----H-TTTEEEEEEEECSBCSHHHH---TTCHHHHHHHHTSCTTC------SCBCHHHHHHH
T ss_pred             HHHHHChHH--HHHHH-----h-hhCcEEEEEecceeccHHHH---HhhHHHHHHHHhcCCCC------CCcCHHHHHHH
Confidence            555444432  11111     1 24899999999988654211   111111  222223332      26789999999


Q ss_pred             HHHHh-cCCC--CCc-eEEeeCC
Q 017977          273 IYEAL-SNPS--YRG-VINGTAP  291 (363)
Q Consensus       273 ~~~~~-~~~~--~~g-~~~i~~~  291 (363)
                      +..++ ....  ..| ++.+.+|
T Consensus       219 v~fLa~S~~a~~itG~~i~vdGG  241 (244)
T d1edoa_         219 VEFLALSPAASYITGQAFTIDGG  241 (244)
T ss_dssp             HHHHHHCSGGGGCCSCEEEESTT
T ss_pred             HHHHHCCchhcCCcCCeEEeCCC
Confidence            99886 3332  345 7777665

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.75  E-value=5.9e-18  Score=142.24  Aligned_cols=199  Identities=15%  Similarity=0.078  Sum_probs=138.2

Q ss_pred             EEEEecCcchHHHHHHHHHHhCCCE-------EEEEeCCCCccccc----CCCCCccccCcccccCcchHHhhcc-----
Q 017977           52 TVSVTGATGFIGRRLVQRLQADNHQ-------VRVLTRSRSKAELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-----  115 (363)
Q Consensus        52 ~vlVtGatG~iG~~l~~~L~~~g~~-------V~~~~r~~~~~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-----  115 (363)
                      .||||||++.||+++++.|+++|++       |...+|+....+..    ...........+|+.|.++++++++     
T Consensus         3 VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (240)
T d2bd0a1           3 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVER   82 (240)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             EEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            4899999999999999999999987       88999987664432    2222223345689999988876654     


Q ss_pred             --CCCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCc
Q 017977          116 --GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLS  188 (363)
Q Consensus       116 --~~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~  188 (363)
                        .+|++||+||.....   ..+.+..+..+++|+.++..+.+++.+.  ..+..++|++||.++..+       .+...
T Consensus        83 ~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~-------~~~~~  155 (240)
T d2bd0a1          83 YGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKA-------FRHSS  155 (240)
T ss_dssp             TSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-------CTTCH
T ss_pred             cCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCC-------CCCCh
Confidence              589999999975442   2456778889999999988887777654  134567999999854332       33445


Q ss_pred             chhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHH
Q 017977          189 DYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDD  268 (363)
Q Consensus       189 ~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  268 (363)
                      .|..+|.+...++++       ....+. ..|+++..+.||.+-.+.....               . ......+...+|
T Consensus       156 ~Y~asK~al~~lt~~-------la~el~-~~gIrvn~i~PG~v~T~~~~~~---------------~-~~~~~~~~~Ped  211 (240)
T d2bd0a1         156 IYCMSKFGQRGLVET-------MRLYAR-KCNVRITDVQPGAVYTPMWGKV---------------D-DEMQALMMMPED  211 (240)
T ss_dssp             HHHHHHHHHHHHHHH-------HHHHHT-TTTEEEEEEEECCBCSTTTCCC---------------C-STTGGGSBCHHH
T ss_pred             HHHHHHHHHHHHHHH-------HHHHhC-cCCeEEEEeeeCcccCchhhhc---------------C-HhhHhcCCCHHH
Confidence            677776554444432       111111 2489999999999876632111               0 011123577899


Q ss_pred             HHHHHHHHhcCCC
Q 017977          269 IVNLIYEALSNPS  281 (363)
Q Consensus       269 ~a~a~~~~~~~~~  281 (363)
                      +|++++.++..+.
T Consensus       212 vA~~v~~l~s~~~  224 (240)
T d2bd0a1         212 IAAPVVQAYLQPS  224 (240)
T ss_dssp             HHHHHHHHHTSCT
T ss_pred             HHHHHHHHHcCCc
Confidence            9999999998765

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.74  E-value=1.2e-17  Score=140.47  Aligned_cols=220  Identities=16%  Similarity=0.116  Sum_probs=141.4

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCC-CCccccCcccccCcchHHhhcc-------CCCEE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTAV  120 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~d~V  120 (363)
                      .+++++||||++.||+++++.|+++|++|++.+|+.++....... ........+|+.+.++++++++       ++|++
T Consensus         4 ~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDiL   83 (241)
T d2a4ka1           4 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGV   83 (241)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEe
Confidence            457999999999999999999999999999999998765443222 2223355689999988877654       58999


Q ss_pred             EEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhc
Q 017977          121 VNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCL  197 (363)
Q Consensus       121 i~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~  197 (363)
                      ||+|+.....   ..+.+..+..+++|+.+...+.+++.+.....+ .|+++|+.+.       ...+..+.|..+|.+.
T Consensus        84 innAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~-~i~~~ss~a~-------~~~~~~~~Y~~sK~al  155 (241)
T d2a4ka1          84 AHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGG-SLVLTGSVAG-------LGAFGLAHYAAGKLGV  155 (241)
T ss_dssp             EEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTC-EEEEECCCTT-------CCHHHHHHHHHCSSHH
T ss_pred             ccccccccccchhhhhcccccccccccccccccccccccccccccc-ceeecccccc-------ccccCccccchhhHHH
Confidence            9999875442   345566788999999999999999877523333 4444444221       1112223455544333


Q ss_pred             ccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHH-HHHhCCCCCCCCCccccccHHHHHHHHHHH
Q 017977          198 VSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEA  276 (363)
Q Consensus       198 ~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~  276 (363)
                      ..++++       ....+. ..|+++.++.||.+-.+......  -... ......|++      .+..++|+|+++..+
T Consensus       156 ~~lt~~-------lA~el~-~~gIrvN~I~PG~v~T~~~~~~~--~~~~~~~~~~~p~~------r~~~p~dva~~v~fL  219 (241)
T d2a4ka1         156 VGLART-------LALELA-RKGVRVNVLLPGLIQTPMTAGLP--PWAWEQEVGASPLG------RAGRPEEVAQAALFL  219 (241)
T ss_dssp             HHHHHH-------HHHHHT-TTTCEEEEEEECSBCCGGGTTSC--HHHHHHHHHTSTTC------SCBCHHHHHHHHHHH
T ss_pred             HHHHHH-------HHHHHh-HhCCEEeeeccCcCCCHHHHhhh--HhHHHHHHhCCCCC------CCcCHHHHHHHHHHH
Confidence            322221       111111 23899999999998655321110  1111 222333332      267899999999999


Q ss_pred             hcCCC--CCc-eEEeeCCC
Q 017977          277 LSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       277 ~~~~~--~~g-~~~i~~~~  292 (363)
                      +....  ..| ++.+.+|.
T Consensus       220 ~S~~s~~itG~~i~vDGG~  238 (241)
T d2a4ka1         220 LSEESAYITGQALYVDGGR  238 (241)
T ss_dssp             HSGGGTTCCSCEEEESTTT
T ss_pred             hcchhCCCcCceEEeCCCc
Confidence            97543  455 77777764

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=99.74  E-value=5.6e-18  Score=144.01  Aligned_cols=220  Identities=14%  Similarity=0.089  Sum_probs=143.0

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCccccc----CCCCCccccCcccccCcchHHhhcc--------C
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI----FPGKKTRFFPGVMIAEEPQWRDCIQ--------G  116 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~--------~  116 (363)
                      .+|+||||||++.||+++++.|+++|++|++++|++.+.++.    ...........+|+.+.++++++++        .
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g~   84 (258)
T d1ae1a_           5 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGK   84 (258)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            457999999999999999999999999999999998654332    1122222244689999887766543        3


Q ss_pred             CCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchh
Q 017977          117 STAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYC  191 (363)
Q Consensus       117 ~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~  191 (363)
                      +|++||+|+.....   ..+.+.....+++|+.++..+.+++...  ..+..++|++||..+..+       .+....|.
T Consensus        85 idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~-------~~~~~~Y~  157 (258)
T d1ae1a_          85 LNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSA-------LPSVSLYS  157 (258)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSC-------CTTCHHHH
T ss_pred             cEEEeccccccccCccccCCHHHHhhhhhhccccccccccccccccccccccccccccccccccc-------cccchhHH
Confidence            79999999976543   3466778899999999998888776532  245567999999853221       23344566


Q ss_pred             hhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc-------cchHHHHHHHhCCCCCCCCCccccc
Q 017977          192 AKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL-------AKMIPLFMMFAGGPLGSGQQWFSWI  264 (363)
Q Consensus       192 ~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~i  264 (363)
                      .+|.+...+++       .....+.. .|+++..|.||.+..+.....       .....  ......|++      .+.
T Consensus       158 ~sK~al~~lt~-------~lA~el~~-~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~--~~~~~~plg------R~~  221 (258)
T d1ae1a_         158 ASKGAINQMTK-------SLACEWAK-DNIRVNSVAPGVILTPLVETAIKKNPHQKEEID--NFIVKTPMG------RAG  221 (258)
T ss_dssp             HHHHHHHHHHH-------HHHHHHGG-GTEEEEEEEECSBC-------------CHHHHH--HHHHHSTTC------SCB
T ss_pred             HHHHHHHHHHH-------HHHHhcCc-CcEEEEEEeeCcccCcchhhhhhhhhhhHHHHH--HHHhcCCCC------CCc
Confidence            65544333322       11111122 389999999999987632111       11111  112222332      278


Q ss_pred             cHHHHHHHHHHHhcCCC--CCc-eEEeeCC
Q 017977          265 HLDDIVNLIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       265 ~v~D~a~a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      ..+|+|+++..++....  ..| .+.+.+|
T Consensus       222 ~pediA~~v~fL~S~~s~~itG~~i~vDGG  251 (258)
T d1ae1a_         222 KPQEVSALIAFLCFPAASYITGQIIWADGG  251 (258)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CHHHHHHHHHHHhChhhCCCcCcEEEeCCC
Confidence            89999999999996443  455 6776665

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.74  E-value=9e-18  Score=142.42  Aligned_cols=218  Identities=13%  Similarity=0.052  Sum_probs=144.8

Q ss_pred             EEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc-------CCCEEEEcc
Q 017977           52 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVVNLA  124 (363)
Q Consensus        52 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~Vi~~a  124 (363)
                      ++|||||++.||+.+++.|+++|++|.+.+|+....+++....  ..+..+|+.+.++++++++       ++|++||||
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~--~~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLVnNA   79 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFA--ETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSND   79 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHH--HHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEEC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhh--CcEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            6899999999999999999999999999999877655432211  1144689988887776654       689999999


Q ss_pred             CCCCC----CCCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhcc
Q 017977          125 GTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLV  198 (363)
Q Consensus       125 ~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~  198 (363)
                      |....    ...+.+..+..+++|+.++..+.+++.+.  ..+..++|++||.++..+       .+....|..+|.+..
T Consensus        80 g~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~-------~~~~~~Y~asKaal~  152 (252)
T d1zmta1          80 IFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGP-------WKELSTYTSARAGAC  152 (252)
T ss_dssp             CCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSC-------CTTCHHHHHHHHHHH
T ss_pred             cCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccccc-------cccccccccccccHH
Confidence            86432    12455677889999999988887776543  134567999999853222       233446777665544


Q ss_pred             cchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccc-----hHH-HH-HHHhCCCCCCCCCccccccHHHHHH
Q 017977          199 SFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAK-----MIP-LF-MMFAGGPLGSGQQWFSWIHLDDIVN  271 (363)
Q Consensus       199 ~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~-----~~~-~~-~~~~~~~~~~~~~~~~~i~v~D~a~  271 (363)
                      .++++  ++.     .+. .+|+++..|.||.+-.+.......     ..+ .. ...+..|++      .+...+|+|+
T Consensus       153 ~lt~~--lA~-----ela-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl~------R~g~pedvA~  218 (252)
T d1zmta1         153 TLANA--LSK-----ELG-EYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQ------RLGTQKELGE  218 (252)
T ss_dssp             HHHHH--HHH-----HHG-GGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSS------SCBCHHHHHH
T ss_pred             HHHHH--HHH-----Hhc-ccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCCC------CCcCHHHHHH
Confidence            44321  111     111 238999999999998764322100     001 11 122223332      2678999999


Q ss_pred             HHHHHhcCCC--CCc-eEEeeCCC
Q 017977          272 LIYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       272 a~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      +++.++....  ..| .+.+.+|-
T Consensus       219 ~v~fL~S~~s~~iTG~~i~vdGG~  242 (252)
T d1zmta1         219 LVAFLASGSCDYLTGQVFWLAGGF  242 (252)
T ss_dssp             HHHHHHTTSCGGGTTCEEEESTTC
T ss_pred             HHHHHhCchhcCCcCCeEEECCCc
Confidence            9999997655  345 77777764

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=6e-18  Score=146.65  Aligned_cols=223  Identities=14%  Similarity=0.082  Sum_probs=142.3

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccC---------CCCCccccCcccccCcchHHhhcc---
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF---------PGKKTRFFPGVMIAEEPQWRDCIQ---  115 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---------~~~~~~~~~~~d~~~~~~~~~~~~---  115 (363)
                      ..+++++||||++.||+++++.|+++|++|++++|+.++.+...         ..........+|+.|.+++.++++   
T Consensus        10 L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~   89 (297)
T d1yxma1          10 LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTL   89 (297)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHHH
Confidence            45689999999999999999999999999999999876533211         111222345689999988877664   


Q ss_pred             ----CCCEEEEccCCCCC---CCCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCC
Q 017977          116 ----GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITW  186 (363)
Q Consensus       116 ----~~d~Vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~  186 (363)
                          ++|++||+|+....   ...+.+..+..+++|+.++..+.+++.+.  ..+...+|++|+. ...+       .+.
T Consensus        90 ~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~-~~~~-------~~~  161 (297)
T d1yxma1          90 DTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVP-TKAG-------FPL  161 (297)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCC-CTTC-------CTT
T ss_pred             HHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccccccccccccc-cccc-------ccc
Confidence                68999999987543   23456778889999999999888877642  1334457766655 3111       233


Q ss_pred             CcchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCC-cccchHHHH--HHHhCCCCCCCCCcccc
Q 017977          187 LSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGG-ALAKMIPLF--MMFAGGPLGSGQQWFSW  263 (363)
Q Consensus       187 ~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~  263 (363)
                      ...|..+|.+...++++       ....+. .+|+++..|.||.|..+... ........+  ......|++      .+
T Consensus       162 ~~~Y~asKaal~~ltk~-------lA~el~-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~plg------R~  227 (297)
T d1yxma1         162 AVHSGAARAGVYNLTKS-------LALEWA-CSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAK------RI  227 (297)
T ss_dssp             CHHHHHHHHHHHHHHHH-------HHHHTG-GGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTS------SC
T ss_pred             cccchhHHHHHHHHHHH-------HHHHhc-ccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHhcCCCC------CC
Confidence            34555554433322221       111111 23899999999999776321 111111100  111111222      26


Q ss_pred             ccHHHHHHHHHHHhcCCC--CCc-eEEeeCCC
Q 017977          264 IHLDDIVNLIYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       264 i~v~D~a~a~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      ...+|+|++++.++....  ..| ++.+.+|.
T Consensus       228 g~pedvA~~v~fL~Sd~s~~iTG~~i~VDGG~  259 (297)
T d1yxma1         228 GVPEEVSSVVCFLLSPAASFITGQSVDVDGGR  259 (297)
T ss_dssp             BCTHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             cCHHHHHHHHHHHhCchhcCcCCcEEEeCcCh
Confidence            779999999999996543  445 77777764

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=8.6e-18  Score=141.79  Aligned_cols=224  Identities=10%  Similarity=0.006  Sum_probs=142.7

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHh---hccCCCEEEEcc
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRD---CIQGSTAVVNLA  124 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~---~~~~~d~Vi~~a  124 (363)
                      .+.+++|||||++.||+++++.|+++|++|++++|++.+.++..+..... ...+|+.+.+.++.   .+.++|++||+|
T Consensus         4 l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~~~~~-~~~~d~~~~~~~~~~~~~~~~id~lVn~a   82 (245)
T d2ag5a1           4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQ-TRVLDVTKKKQIDQFANEVERLDVLFNVA   82 (245)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEE-EEECCTTCHHHHHHHHHHCSCCSEEEECC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhccCCc-eeeeeccccccccccccccccceeEEecc
Confidence            45579999999999999999999999999999999987766554433211 22345554444433   345789999999


Q ss_pred             CCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhccc
Q 017977          125 GTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVS  199 (363)
Q Consensus       125 ~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~~  199 (363)
                      |.....   ..+.+..+..+++|+.++..+.+++.+.  ..+..++|++||..+..      ...+....|..+|.+...
T Consensus        83 g~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~------~~~~~~~~Y~~sKaal~~  156 (245)
T d2ag5a1          83 GFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSV------KGVVNRCVYSTTKAAVIG  156 (245)
T ss_dssp             CCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTT------BCCTTBHHHHHHHHHHHH
T ss_pred             cccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhcc------CCccchhHHHHHHHHHHH
Confidence            986552   3356678889999999999888877652  23445799998873210      112233456665544333


Q ss_pred             chhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc----cchHHHH-HHHhCCCCCCCCCccccccHHHHHHHHH
Q 017977          200 FNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL----AKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIY  274 (363)
Q Consensus       200 y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~a~~  274 (363)
                      +.++       ....+. .+|+++..|.||.+-.+.....    ....... ......|++      .+...+|+|+++.
T Consensus       157 l~r~-------lA~e~~-~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~------R~~~pedva~~v~  222 (245)
T d2ag5a1         157 LTKS-------VAADFI-QQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTG------RFATAEEIAMLCV  222 (245)
T ss_dssp             HHHH-------HHHHHG-GGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTS------SCEEHHHHHHHHH
T ss_pred             HHHH-------HHHHhh-hhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCCCC------CCcCHHHHHHHHH
Confidence            3221       111111 2389999999999977532110    0000011 222233332      2678999999999


Q ss_pred             HHhcCCC--CCc-eEEeeCCC
Q 017977          275 EALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       275 ~~~~~~~--~~g-~~~i~~~~  292 (363)
                      .++....  ..| ++.+.+|.
T Consensus       223 fL~s~~s~~iTG~~i~VDGG~  243 (245)
T d2ag5a1         223 YLASDESAYVTGNPVIIDGGW  243 (245)
T ss_dssp             HHHSGGGTTCCSCEEEECTTG
T ss_pred             HHhChhhCCCcCceEEeCCCc
Confidence            9997543  445 77777763

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.73  E-value=8.7e-18  Score=143.60  Aligned_cols=223  Identities=16%  Similarity=0.098  Sum_probs=139.8

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCC-------CCCccccCcccccCcchHHhhcc------
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP-------GKKTRFFPGVMIAEEPQWRDCIQ------  115 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~------  115 (363)
                      +.|.++||||++.||++++++|+++|++|++++|+.++.+....       .........+|+.+.++++++++      
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~   83 (264)
T d1spxa_           4 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF   83 (264)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            45789999999999999999999999999999998765433211       11112244689999988877664      


Q ss_pred             -CCCEEEEccCCCCCC-------CCChhhHHHHHHHHHHHHHHHHHHHHhC-CCCCCCeEEEeccc-eecCCcccccccC
Q 017977          116 -GSTAVVNLAGTPIGT-------RWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLELVKP-KYLMRAAHQEMIT  185 (363)
Q Consensus       116 -~~d~Vi~~a~~~~~~-------~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~SS~~-~~yg~~~~~e~~~  185 (363)
                       ++|++||+||.....       ..+.+..+..+++|+.++..+.+++.+. ..+...+|+++|+. +..+       .+
T Consensus        84 g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~~~-------~~  156 (264)
T d1spxa_          84 GKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHA-------TP  156 (264)
T ss_dssp             SCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSC-------CT
T ss_pred             CCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCcceeeeeecccccc-------CC
Confidence             689999999864221       1244667889999999998888877654 12334566666653 2222       23


Q ss_pred             CCcchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCc-------ccchHHHH-HHHhCCCCCCC
Q 017977          186 WLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA-------LAKMIPLF-MMFAGGPLGSG  257 (363)
Q Consensus       186 ~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~-------~~~~~~~~-~~~~~~~~~~~  257 (363)
                      ..+.|..+|.+...++++       ....+. .+|+++..|.||.|-.+....       ........ ......|++  
T Consensus       157 ~~~~Y~asKaal~~lt~~-------lA~el~-~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~--  226 (264)
T d1spxa_         157 DFPYYSIAKAAIDQYTRN-------TAIDLI-QHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAG--  226 (264)
T ss_dssp             TSHHHHHHHHHHHHHHHH-------HHHHHG-GGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTS--
T ss_pred             CchhhhhhhhhHHHHHHH-------HHHHhc-ccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCCCC--
Confidence            345577666554444321       111111 238999999999997653211       01111111 112222332  


Q ss_pred             CCccccccHHHHHHHHHHHhcCC--C-CCc-eEEeeCCC
Q 017977          258 QQWFSWIHLDDIVNLIYEALSNP--S-YRG-VINGTAPN  292 (363)
Q Consensus       258 ~~~~~~i~v~D~a~a~~~~~~~~--~-~~g-~~~i~~~~  292 (363)
                          .+...+|+|+++..++..+  . ..| .+.+.+|.
T Consensus       227 ----R~g~pedvA~~v~fL~S~~~s~~itG~~i~vDGG~  261 (264)
T d1spxa_         227 ----VMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGS  261 (264)
T ss_dssp             ----SCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTG
T ss_pred             ----CCcCHHHHHHHHHHHhCCcccCCccCceEEeCCCh
Confidence                2677999999999998643  2 455 77777664

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.73  E-value=1.3e-17  Score=142.26  Aligned_cols=228  Identities=13%  Similarity=0.059  Sum_probs=143.6

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCC-----CCCccccCcccccCcchHHhhcc-------
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP-----GKKTRFFPGVMIAEEPQWRDCIQ-------  115 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~d~~~~~~~~~~~~-------  115 (363)
                      .+.|++|||||++.||+++++.|+++|++|++++|+..+..+..+     .........+|+.|.+++.++++       
T Consensus         7 l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   86 (260)
T d1h5qa_           7 FVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLG   86 (260)
T ss_dssp             CTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            345799999999999999999999999999999999876543211     11122345689999988877664       


Q ss_pred             CCCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC---CCCCCCeEEEeccceecC-CcccccccCCCc
Q 017977          116 GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES---PEGVRPSVLELVKPKYLM-RAAHQEMITWLS  188 (363)
Q Consensus       116 ~~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~~v~~SS~~~~yg-~~~~~e~~~~~~  188 (363)
                      .+|++||+|+.....   ..+.+..+..+++|+.++..+.+++.+.   ......++..+|. ..+. ....-...+...
T Consensus        87 ~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~-~~~~~~~~~~~~~~~~~  165 (260)
T d1h5qa_          87 PISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSM-SSQIINQSSLNGSLTQV  165 (260)
T ss_dssp             SEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCG-GGTSCCEEETTEECSCH
T ss_pred             CCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeecc-ccccccccccccCcccc
Confidence            689999999875432   3456678889999999988887766542   1334445555554 2221 000001112334


Q ss_pred             chhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCccc-chHHHHHHHhCCCCCCCCCccccccHH
Q 017977          189 DYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALA-KMIPLFMMFAGGPLGSGQQWFSWIHLD  267 (363)
Q Consensus       189 ~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~  267 (363)
                      .|..+|.+...++++       ....+. ..|+++..|.||.+-.+...... ....  ......|++      .+..++
T Consensus       166 ~Y~asKaal~~lt~~-------lA~el~-~~gIrvN~I~PG~i~T~~~~~~~~~~~~--~~~~~~pl~------R~g~pe  229 (260)
T d1h5qa_         166 FYNSSKAACSNLVKG-------LAAEWA-SAGIRVNALSPGYVNTDQTAHMDKKIRD--HQASNIPLN------RFAQPE  229 (260)
T ss_dssp             HHHHHHHHHHHHHHH-------HHHHHG-GGTEEEEEEEECSBCCGGGGGSCHHHHH--HHHHTCTTS------SCBCGG
T ss_pred             chhhhhhhHHHHHHH-------HHHHhc-hhCeEEeecCCCcccCcchhccCHHHHH--HHHhcCCCC------CCcCHH
Confidence            566665444333321       111111 23899999999999765322111 1111  222333332      267799


Q ss_pred             HHHHHHHHHhcCCC--CCc-eEEeeCCC
Q 017977          268 DIVNLIYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       268 D~a~a~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      |+|+++..++....  ..| ++.+.+|.
T Consensus       230 dvA~~v~fL~S~~s~~itG~~i~VDGG~  257 (260)
T d1h5qa_         230 EMTGQAILLLSDHATYMTGGEYFIDGGQ  257 (260)
T ss_dssp             GGHHHHHHHHSGGGTTCCSCEEEECTTG
T ss_pred             HHHHHHHHHhcchhCCCcCceEEECCCe
Confidence            99999999986543  455 77777764

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.72  E-value=1.8e-17  Score=141.08  Aligned_cols=223  Identities=14%  Similarity=0.031  Sum_probs=140.1

Q ss_pred             CccEEEEecCcc--hHHHHHHHHHHhCCCEEEEEeCCCCcccc---cCCCCCccccCcccccCcchHHhhcc-------C
Q 017977           49 SQMTVSVTGATG--FIGRRLVQRLQADNHQVRVLTRSRSKAEL---IFPGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (363)
Q Consensus        49 ~~~~vlVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (363)
                      ++|++|||||+|  .||++++++|+++|++|++.+|+......   ............+|+.|.++++++++       +
T Consensus         7 ~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   86 (256)
T d1ulua_           7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGG   86 (256)
T ss_dssp             TTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhcCC
Confidence            457999999998  79999999999999999998887643221   11111112245689999888877654       6


Q ss_pred             CCEEEEccCCCCC-------CCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcc
Q 017977          117 STAVVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSD  189 (363)
Q Consensus       117 ~d~Vi~~a~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~  189 (363)
                      +|++||+|+....       .....+.....+++|+.++..+.+++........++|++||..+..+       .+....
T Consensus        87 iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~-------~~~~~~  159 (256)
T d1ulua_          87 LDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKV-------VPKYNV  159 (256)
T ss_dssp             EEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSB-------CTTCHH
T ss_pred             ceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCC-------CCCchH
Confidence            8999999986321       12344556778999999999999988764122346899998854222       333446


Q ss_pred             hhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHH-HHHhCCCCCCCCCccccccHHH
Q 017977          190 YCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDD  268 (363)
Q Consensus       190 ~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D  268 (363)
                      |..+|.+...++++       ....+. .+|+++..+.|+.+..+........-... ...+..|++      .+..++|
T Consensus       160 Y~asKaal~~ltr~-------lA~ela-~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~~~~~pl~------R~~~ped  225 (256)
T d1ulua_         160 MAIAKAALEASVRY-------LAYELG-PKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLR------RNITQEE  225 (256)
T ss_dssp             HHHHHHHHHHHHHH-------HHHHHG-GGTCEEEEEEECCC----------CHHHHHHHHHHSTTS------SCCCHHH
T ss_pred             HHHHHHHHHHHHHH-------HHHHhc-ccCCEEeeeccceeeeccccchhhhHHHHHHHHhcCCCC------CCcCHHH
Confidence            66665554444321       111112 23899999999999876432211111111 122223332      2677999


Q ss_pred             HHHHHHHHhcCCC--CCc-eEEeeCCC
Q 017977          269 IVNLIYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       269 ~a~a~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      +|+++..++....  ..| ++.+.+|.
T Consensus       226 vA~~v~fL~S~~s~~itG~~i~VDGG~  252 (256)
T d1ulua_         226 VGNLGLFLLSPLASGITGEVVYVDAGY  252 (256)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHhCchhCCccCCeEEECcCE
Confidence            9999999997543  455 77776663

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.72  E-value=2e-17  Score=143.57  Aligned_cols=233  Identities=13%  Similarity=0.037  Sum_probs=148.0

Q ss_pred             CCCCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCC----------CccccCcccccCcchHHhhc-
Q 017977           46 QKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK----------KTRFFPGVMIAEEPQWRDCI-  114 (363)
Q Consensus        46 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~d~~~~~~~~~~~-  114 (363)
                      +..++++++||||++.||+++++.|+++|++|++.+|+.+.........          .......+|+.+.++.++++ 
T Consensus         3 m~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~   82 (302)
T d1gz6a_           3 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVK   82 (302)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHH
T ss_pred             cCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHH
Confidence            3445679999999999999999999999999999988764321111000          00012236777776665544 


Q ss_pred             ------cCCCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccc
Q 017977          115 ------QGSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEM  183 (363)
Q Consensus       115 ------~~~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~  183 (363)
                            .++|++|||||.....   ..+.+..+..+++|+.++..+.+++.+.  ..+..++|++||.++.++       
T Consensus        83 ~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~-------  155 (302)
T d1gz6a_          83 TALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYG-------  155 (302)
T ss_dssp             HHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC-------
T ss_pred             HHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCC-------
Confidence                  3689999999975442   3456678889999999998888876653  135567999999865444       


Q ss_pred             cCCCcchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCcccc
Q 017977          184 ITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSW  263 (363)
Q Consensus       184 ~~~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (363)
                      .+....|..+|.+...++++       ....+. .+|+++..|.|+.+-.+..    ...+.             .....
T Consensus       156 ~~~~~~Y~asKaal~~lt~~-------la~E~~-~~gIrVN~I~PG~~~t~~~----~~~~~-------------~~~~~  210 (302)
T d1gz6a_         156 NFGQANYSAAKLGLLGLANT-------LVIEGR-KNNIHCNTIAPNAGSRMTE----TVMPE-------------DLVEA  210 (302)
T ss_dssp             CTTCHHHHHHHHHHHHHHHH-------HHHHTG-GGTEEEEEEEEECCSTTTG----GGSCH-------------HHHHH
T ss_pred             CCCcHHHHHHHHHHHHHHHH-------HHHHHh-ccCCceeeeCCCCCCcchh----hcCcH-------------hhHhc
Confidence            34445677766554433321       111111 2389999999987633211    11110             11124


Q ss_pred             ccHHHHHHHHHHHhcCCC-CCc-eEEeeCC-------------------CCcCHHHHHHHHHHHhCCC
Q 017977          264 IHLDDIVNLIYEALSNPS-YRG-VINGTAP-------------------NPVRLAEMCDHLGNVLGRP  310 (363)
Q Consensus       264 i~v~D~a~a~~~~~~~~~-~~g-~~~i~~~-------------------~~~s~~el~~~i~~~~g~~  310 (363)
                      +..+|+|.+++.++.... ..| ++.+.+|                   .+.+..++++.+.+.....
T Consensus       211 ~~PedvA~~v~fL~S~~a~itG~~i~vdGG~~~~~~~~~~~g~~~~~~~~~~t~e~i~~~~~~i~d~~  278 (302)
T d1gz6a_         211 LKPEYVAPLVLWLCHESCEENGGLFEVGAGWIGKLRWERTLGAIVRKRNQPMTPEAVRDNWVKICDFS  278 (302)
T ss_dssp             SCGGGTHHHHHHHTSTTCCCCSCEEEEETTEEEEEEEEECCCEECCBTTBCCCHHHHHHTHHHHTCCT
T ss_pred             CCHHHHHHHHHHHcCCCcCCCCcEEEeCCCceeEEEEeecCcccccCCCCCCCHHHHHHHHHHHhCcc
Confidence            557999999999886433 333 5555433                   2456667777766666543

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.72  E-value=9.2e-17  Score=137.87  Aligned_cols=225  Identities=15%  Similarity=0.014  Sum_probs=145.4

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcc-c----ccCCCCCccccCcccccCcchHHhhcc-------
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-E----LIFPGKKTRFFPGVMIAEEPQWRDCIQ-------  115 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~----~~~~~~~~~~~~~~d~~~~~~~~~~~~-------  115 (363)
                      .++|++|||||++.||+++++.|+++|++|++++|+..+. +    .+...........+|+.|.+++.+.++       
T Consensus        16 L~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g   95 (272)
T d1g0oa_          16 LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFG   95 (272)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhC
Confidence            4458999999999999999999999999999999886542 1    112222223345689999887776654       


Q ss_pred             CCCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhh
Q 017977          116 GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCA  192 (363)
Q Consensus       116 ~~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~  192 (363)
                      ++|++||+++.....   ....+..+..+++|+.++..+.+++.+......++++++|..+..+      ..+....|..
T Consensus        96 ~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~~------~~~~~~~Y~a  169 (272)
T d1g0oa_          96 KLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAK------AVPKHAVYSG  169 (272)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCS------SCSSCHHHHH
T ss_pred             CCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccccccccccccccccc------cccchhhHHH
Confidence            679999999975443   3456677888999999999999999875223345777776632111      1223345666


Q ss_pred             hhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCC------------CcccchHHHHHHHhCCCCCCCCCc
Q 017977          193 KVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDG------------GALAKMIPLFMMFAGGPLGSGQQW  260 (363)
Q Consensus       193 ~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~------------~~~~~~~~~~~~~~~~~~~~~~~~  260 (363)
                      +|.+...++++       ....+.. .|+++..|.||.+-.+..            .....-..........|++     
T Consensus       170 sKaal~~ltk~-------lA~e~~~-~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Plg-----  236 (272)
T d1g0oa_         170 SKGAIETFARC-------MAIDMAD-KKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLR-----  236 (272)
T ss_dssp             HHHHHHHHHHH-------HHHHHGG-GTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTC-----
T ss_pred             HHHHHHHHHHH-------HHHHhch-hCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCCCC-----
Confidence            65444333321       1111222 389999999999865410            0001111111223344443     


Q ss_pred             cccccHHHHHHHHHHHhcCCC--CCc-eEEeeCCC
Q 017977          261 FSWIHLDDIVNLIYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       261 ~~~i~v~D~a~a~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                       .+...+|+|+++..++....  ..| ++.+.+|.
T Consensus       237 -R~~~peevA~~v~fL~s~~s~~itG~~i~vDGG~  270 (272)
T d1g0oa_         237 -RVGLPIDIARVVCFLASNDGGWVTGKVIGIDGGA  270 (272)
T ss_dssp             -SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             -CCcCHHHHHHHHHHHhCchhcCccCceEeECCCC
Confidence             27889999999999997544  455 77777664

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.72  E-value=5e-17  Score=137.69  Aligned_cols=215  Identities=12%  Similarity=0.018  Sum_probs=139.5

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccC-----CCCCccccCccccc-CcchHHhhc-------
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF-----PGKKTRFFPGVMIA-EEPQWRDCI-------  114 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~d~~-~~~~~~~~~-------  114 (363)
                      .+.++||||||++.||+.++++|+++|++|++++|+.++.....     .......+..+|+. +.+++.+++       
T Consensus         3 l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~   82 (254)
T d1sbya1           3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL   82 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHc
Confidence            34579999999999999999999999999999988876543221     11112223456776 444455444       


Q ss_pred             cCCCEEEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhC-C-C---CCCCeEEEeccceecCCcccccccCCCcc
Q 017977          115 QGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES-P-E---GVRPSVLELVKPKYLMRAAHQEMITWLSD  189 (363)
Q Consensus       115 ~~~d~Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~---~~~~~v~~SS~~~~yg~~~~~e~~~~~~~  189 (363)
                      .++|++||+||..     .++..+.++++|+.++.++.+++.+. . .   ...++|++||..+.++       .+....
T Consensus        83 g~iDilvnnAG~~-----~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~-------~~~~~~  150 (254)
T d1sbya1          83 KTVDILINGAGIL-----DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNA-------IHQVPV  150 (254)
T ss_dssp             SCCCEEEECCCCC-----CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC-------CTTSHH
T ss_pred             CCCCEEEeCCCCC-----CHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccC-------CCCCHH
Confidence            3689999999963     45567899999999998888877764 1 1   2345899998854332       334456


Q ss_pred             hhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCC---CCcccchHHHH-HHHhCCCCCCCCCcccccc
Q 017977          190 YCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKD---GGALAKMIPLF-MMFAGGPLGSGQQWFSWIH  265 (363)
Q Consensus       190 ~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~  265 (363)
                      |..+|.+...++++  ++.++     .. .|+++..|.||.|..+.   ..........+ .....         +....
T Consensus       151 Y~asKaal~~~t~~--la~el-----~~-~gIrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~---------~~~~~  213 (254)
T d1sbya1         151 YSASKAAVVSFTNS--LAKLA-----PI-TGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLS---------HPTQT  213 (254)
T ss_dssp             HHHHHHHHHHHHHH--HHHHH-----HH-HSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTT---------SCCEE
T ss_pred             HHHHHHHHHHHHHH--HHhhc-----cc-cCeEEEEEEeCCCcCccccccccchhHHHHHHhcccc---------CCCCC
Confidence            77776655544432  12221     11 38999999999998752   11111111111 11111         12457


Q ss_pred             HHHHHHHHHHHhcCCCCCceEEeeCC
Q 017977          266 LDDIVNLIYEALSNPSYRGVINGTAP  291 (363)
Q Consensus       266 v~D~a~a~~~~~~~~~~~g~~~i~~~  291 (363)
                      .+++|++++.+++....+.++.+.+|
T Consensus       214 ~e~va~~~~~~~~~~~tG~vi~vdgG  239 (254)
T d1sbya1         214 SEQCGQNFVKAIEANKNGAIWKLDLG  239 (254)
T ss_dssp             HHHHHHHHHHHHHHCCTTCEEEEETT
T ss_pred             HHHHHHHHHHhhhCCCCCCEEEECCC
Confidence            99999999988876654447777776

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.71  E-value=2.2e-17  Score=141.69  Aligned_cols=223  Identities=17%  Similarity=0.133  Sum_probs=141.5

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccC----CC---CCccccCcccccCcchHHhhcc------
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PG---KKTRFFPGVMIAEEPQWRDCIQ------  115 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~---~~~~~~~~~d~~~~~~~~~~~~------  115 (363)
                      ++++++||||++.||+++++.|+++|++|++++|+.++.+...    ..   ........+|+.|.++++++++      
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   82 (274)
T d1xhla_           3 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF   82 (274)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHHc
Confidence            4579999999999999999999999999999999876543321    11   1112244589999988877664      


Q ss_pred             -CCCEEEEccCCCCCCC-----CChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCC
Q 017977          116 -GSTAVVNLAGTPIGTR-----WSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWL  187 (363)
Q Consensus       116 -~~d~Vi~~a~~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~  187 (363)
                       .+|++||+||......     .+.+..+..+++|+.++..+.+++.+.  ..+...++++||.++..+       .+..
T Consensus        83 G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~-------~~~~  155 (274)
T d1xhla_          83 GKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQA-------HSGY  155 (274)
T ss_dssp             SCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSC-------CTTS
T ss_pred             CCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhcccc-------CCCC
Confidence             6899999998643321     234567889999999998888777653  134445666666533221       2334


Q ss_pred             cchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc-------cchHHHHHHH-hCCCCCCCCC
Q 017977          188 SDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL-------AKMIPLFMMF-AGGPLGSGQQ  259 (363)
Q Consensus       188 ~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~-------~~~~~~~~~~-~~~~~~~~~~  259 (363)
                      +.|..+|.+...++++       ....+. .+|+++..|.||.+-.+.....       .......... ...|++    
T Consensus       156 ~~Y~asKaal~~ltk~-------lA~ela-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPlg----  223 (274)
T d1xhla_         156 PYYACAKAALDQYTRC-------TAIDLI-QHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVG----  223 (274)
T ss_dssp             HHHHHHHHHHHHHHHH-------HHHHHG-GGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTS----
T ss_pred             ceehhhhhHHHHHHHH-------HHHHHh-HhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCCC----
Confidence            4666665554444321       111112 2389999999999976521100       0011111111 112222    


Q ss_pred             ccccccHHHHHHHHHHHhcCC--C-CCc-eEEeeCCC
Q 017977          260 WFSWIHLDDIVNLIYEALSNP--S-YRG-VINGTAPN  292 (363)
Q Consensus       260 ~~~~i~v~D~a~a~~~~~~~~--~-~~g-~~~i~~~~  292 (363)
                        .+..++|+|++++.++..+  . ..| .+.+.+|.
T Consensus       224 --R~g~pediA~~v~fL~S~d~s~~itG~~i~vDGG~  258 (274)
T d1xhla_         224 --HCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGS  258 (274)
T ss_dssp             --SCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTG
T ss_pred             --CCcCHHHHHHHHHHHcCCccccCccCcEEEeCcCH
Confidence              2678999999999998632  2 455 77777764

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=1.9e-17  Score=139.22  Aligned_cols=204  Identities=12%  Similarity=0.047  Sum_probs=135.1

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccC----CCCCccccCcccccCcchHHhhcc-------C
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------G  116 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~-------~  116 (363)
                      ..++.++||||++.||++++++|+++|++|++++|+.++.+...    ..........+|+.|.+++.++++       .
T Consensus         5 l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~   84 (244)
T d1yb1a_           5 VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGD   84 (244)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence            34579999999999999999999999999999999886644321    112222355689999988877654       5


Q ss_pred             CCEEEEccCCCCCCCC---ChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcchh
Q 017977          117 STAVVNLAGTPIGTRW---SSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYC  191 (363)
Q Consensus       117 ~d~Vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~  191 (363)
                      +|++||+||.......   ..+..+.++++|+.++.++.+++.+.  ..+..++|++||..+..+       .+..+.|.
T Consensus        85 idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~-------~~~~~~Y~  157 (244)
T d1yb1a_          85 VSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVS-------VPFLLAYC  157 (244)
T ss_dssp             CSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCC-------HHHHHHHH
T ss_pred             CceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCC-------CCCcHHHH
Confidence            8999999998655332   23446778999999988887766653  245567999999854222       22233555


Q ss_pred             hhhhhcccchhhHHHHHHHHHHHhccC-CCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHH
Q 017977          192 AKVYCLVSFNRGVLVCREWEGTALKVN-KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIV  270 (363)
Q Consensus       192 ~~~~~~~~y~~~k~~~~~~~~~~~~~~-~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  270 (363)
                      .+|.+...|.++      +..+..... .|+.++.+.||.|-.+....   ...              .....+..+|+|
T Consensus       158 asKaal~~~~~~------La~El~~~~~~gI~V~~i~PG~v~T~~~~~---~~~--------------~~~~~~~pe~va  214 (244)
T d1yb1a_         158 SSKFAAVGFHKT------LTDELAALQITGVKTTCLCPNFVNTGFIKN---PST--------------SLGPTLEPEEVV  214 (244)
T ss_dssp             HHHHHHHHHHHH------HHHHHHHTTCTTEEEEEEEETHHHHCSTTC---THH--------------HHCCCCCHHHHH
T ss_pred             HHHHHHHHHHHH------HHHHHHhhcCCCEEEEEEEcCCCCChhhhC---cCc--------------cccCCCCHHHHH
Confidence            555444433321      111111111 38999999999886542211   000              011246789999


Q ss_pred             HHHHHHhcCCC
Q 017977          271 NLIYEALSNPS  281 (363)
Q Consensus       271 ~a~~~~~~~~~  281 (363)
                      +.++..+....
T Consensus       215 ~~i~~~~~~~~  225 (244)
T d1yb1a_         215 NRLMHGILTEQ  225 (244)
T ss_dssp             HHHHHHHHTTC
T ss_pred             HHHHHHHhcCC
Confidence            99998886643

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.70  E-value=4.5e-17  Score=139.66  Aligned_cols=224  Identities=16%  Similarity=0.088  Sum_probs=141.7

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccC----CC---CCccccCcccccCcchHHhhcc------
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PG---KKTRFFPGVMIAEEPQWRDCIQ------  115 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~---~~~~~~~~~d~~~~~~~~~~~~------  115 (363)
                      +.|+++||||++.||+++++.|+++|++|++++|+.++.+...    ..   ........+|+.|.++++++++      
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~   83 (272)
T d1xkqa_           4 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF   83 (272)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            4579999999999999999999999999999999876543221    11   1112245689999988877664      


Q ss_pred             -CCCEEEEccCCCCCCC-------CChhhHHHHHHHHHHHHHHHHHHHHhC-CCCCCCeEEEecc-ceecCCcccccccC
Q 017977          116 -GSTAVVNLAGTPIGTR-------WSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLELVK-PKYLMRAAHQEMIT  185 (363)
Q Consensus       116 -~~d~Vi~~a~~~~~~~-------~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~SS~-~~~yg~~~~~e~~~  185 (363)
                       ++|++||+||......       ...+..+..+++|+.++..+.+++.+. ..+...+|+++|+ ++..+       .+
T Consensus        84 g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~~-------~~  156 (272)
T d1xkqa_          84 GKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQA-------QP  156 (272)
T ss_dssp             SCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSC-------CC
T ss_pred             CCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhccccC-------CC
Confidence             6899999999754322       223357788999999998888877653 1123345656554 23222       23


Q ss_pred             CCcchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCC---cccchH----HHHHH-HhCCCCCCC
Q 017977          186 WLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGG---ALAKMI----PLFMM-FAGGPLGSG  257 (363)
Q Consensus       186 ~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~---~~~~~~----~~~~~-~~~~~~~~~  257 (363)
                      ....|..+|.+...++++  ++.++     . .+|+++..|.||.|-.+...   ......    ..... ....|++  
T Consensus       157 ~~~~Y~asKaal~~ltk~--lA~el-----~-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Plg--  226 (272)
T d1xkqa_         157 DFLYYAIAKAALDQYTRS--TAIDL-----A-KFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIG--  226 (272)
T ss_dssp             SSHHHHHHHHHHHHHHHH--HHHHH-----H-TTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTS--
T ss_pred             CcchhhhHHHHHHHHHHH--HHHHh-----c-ccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCCCC--
Confidence            345677776555444432  11111     1 24899999999998765211   000111    11111 1112222  


Q ss_pred             CCccccccHHHHHHHHHHHhcCC--C-CCc-eEEeeCCCC
Q 017977          258 QQWFSWIHLDDIVNLIYEALSNP--S-YRG-VINGTAPNP  293 (363)
Q Consensus       258 ~~~~~~i~v~D~a~a~~~~~~~~--~-~~g-~~~i~~~~~  293 (363)
                          .+..++|+|+++..++..+  . ..| ++.+.+|..
T Consensus       227 ----R~g~pediA~~v~fL~S~~as~~iTG~~i~vDGG~~  262 (272)
T d1xkqa_         227 ----AAGKPEHIANIILFLADRNLSFYILGQSIVADGGTS  262 (272)
T ss_dssp             ----SCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred             ----CCcCHHHHHHHHHHHhCcchhCCccCeEEEeCcCHH
Confidence                2678999999999998632  2 345 777777643

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.70  E-value=7.8e-17  Score=137.24  Aligned_cols=224  Identities=19%  Similarity=0.049  Sum_probs=141.6

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcc-cc----cCCCCCccccCcccccCcchHHhhcc-------
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-EL----IFPGKKTRFFPGVMIAEEPQWRDCIQ-------  115 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~----~~~~~~~~~~~~~d~~~~~~~~~~~~-------  115 (363)
                      ..+|+||||||++.||+++++.|+++|++|++.+|+..+. +.    +...........+|+.|.+++++.++       
T Consensus         4 L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g   83 (259)
T d1ja9a_           4 LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFG   83 (259)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHcC
Confidence            3457999999999999999999999999999877765442 21    11222223355689999888877664       


Q ss_pred             CCCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhh
Q 017977          116 GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCA  192 (363)
Q Consensus       116 ~~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~  192 (363)
                      ++|++||+||.....   ....+..+..+++|+.+...+++++.+......++++++|..+.+.      ..+....|..
T Consensus        84 ~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~------~~~~~~~Y~a  157 (259)
T d1ja9a_          84 GLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMT------GIPNHALYAG  157 (259)
T ss_dssp             CEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCC------SCCSCHHHHH
T ss_pred             CCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCccccccccccccc------CCCCchhHHH
Confidence            689999999986443   2456677889999999999999888875112234666665533221      1233345666


Q ss_pred             hhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCC----------CCcccchHHHH--HHHhCCCCCCCCCc
Q 017977          193 KVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKD----------GGALAKMIPLF--MMFAGGPLGSGQQW  260 (363)
Q Consensus       193 ~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~----------~~~~~~~~~~~--~~~~~~~~~~~~~~  260 (363)
                      +|.+...+.++       ....+. ..|+++..|.||.+-.+.          ..........+  ......|++     
T Consensus       158 sK~al~~l~r~-------lA~e~~-~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~-----  224 (259)
T d1ja9a_         158 SKAAVEGFCRA-------FAVDCG-AKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLK-----  224 (259)
T ss_dssp             HHHHHHHHHHH-------HHHHHG-GGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTS-----
T ss_pred             HHHHHHHHHHH-------HHHHHh-hcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCCC-----
Confidence            55443333321       111112 238999999999986431          00000001111  122233332     


Q ss_pred             cccccHHHHHHHHHHHhcCCC--CCc-eEEeeCC
Q 017977          261 FSWIHLDDIVNLIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       261 ~~~i~v~D~a~a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                       .+...+|+|++++.+++...  ..| .+.+.+|
T Consensus       225 -R~g~p~eVa~~v~fL~S~~a~~itG~~i~vDGG  257 (259)
T d1ja9a_         225 -RIGYPADIGRAVSALCQEESEWINGQVIKLTGG  257 (259)
T ss_dssp             -SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -CCcCHHHHHHHHHHHhCchhcCCcCceEEeCCC
Confidence             36789999999999997654  455 6766665

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=1.3e-15  Score=129.11  Aligned_cols=215  Identities=16%  Similarity=0.062  Sum_probs=134.2

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCccccc----CCCC--CccccCcccccCcchHHhhcc------
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI----FPGK--KTRFFPGVMIAEEPQWRDCIQ------  115 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~--~~~~~~~~d~~~~~~~~~~~~------  115 (363)
                      .+.+.+|||||++.||+++++.|+++|++|++.+|+..+.+..    ....  .......+|+.+++++.++++      
T Consensus         8 lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~   87 (257)
T d1xg5a_           8 WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH   87 (257)
T ss_dssp             GTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            4567899999999999999999999999999999987654432    1111  122244689999988876654      


Q ss_pred             -CCCEEEEccCCCCC---CCCChhhHHHHHHHHHHHHHHHHHHHHhC----CCCCCCeEEEeccceecCCcccccccCCC
Q 017977          116 -GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES----PEGVRPSVLELVKPKYLMRAAHQEMITWL  187 (363)
Q Consensus       116 -~~d~Vi~~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~~v~~SS~~~~yg~~~~~e~~~~~  187 (363)
                       ++|++||+|+....   ...+.+..+..+++|+.+...+.+++.+.    .....++|++||.++..+     ...+..
T Consensus        88 g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~-----~p~~~~  162 (257)
T d1xg5a_          88 SGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRV-----LPLSVT  162 (257)
T ss_dssp             CCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSC-----CSCGGG
T ss_pred             CCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCC-----CCCccc
Confidence             68999999997544   23456778889999999988876665431    122457999999843110     001112


Q ss_pred             cchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCc-ccchHHHHHHHhCCCCCCCCCccccccH
Q 017977          188 SDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA-LAKMIPLFMMFAGGPLGSGQQWFSWIHL  266 (363)
Q Consensus       188 ~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v  266 (363)
                      ..|..+|.+...+.+      .+..+......++++..+.||.+-.+.... .........  ...+.      ..++..
T Consensus       163 ~~Y~~sKaal~~ltr------~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~~~~~~~--~~~~~------~r~~~p  228 (257)
T d1xg5a_         163 HFYSATKYAVTALTE------GLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAA--ATYEQ------MKCLKP  228 (257)
T ss_dssp             HHHHHHHHHHHHHHH------HHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHH--HHHC---------CBCH
T ss_pred             HHHHHHHHHHHhCHH------HHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChhhHHHHH--hcCCC------CCCcCH
Confidence            235555433322221      111111112348999999999776442110 001111111  11111      236789


Q ss_pred             HHHHHHHHHHhcCCC
Q 017977          267 DDIVNLIYEALSNPS  281 (363)
Q Consensus       267 ~D~a~a~~~~~~~~~  281 (363)
                      +|+|++++.++..+.
T Consensus       229 edvA~~v~fL~s~~a  243 (257)
T d1xg5a_         229 EDVAEAVIYVLSTPA  243 (257)
T ss_dssp             HHHHHHHHHHHHSCT
T ss_pred             HHHHHHHHHHhCChh
Confidence            999999999997765

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=99.68  E-value=4.4e-17  Score=139.94  Aligned_cols=221  Identities=16%  Similarity=0.100  Sum_probs=140.5

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCC-CccccCcccccCcchHHhhcc-------CCCEE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK-KTRFFPGVMIAEEPQWRDCIQ-------GSTAV  120 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~-------~~d~V  120 (363)
                      ++++++||||++.||+++++.|+++|++|++++|+.++..++.... .......+|+.+.++++++++       .+|++
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idil   83 (276)
T d1bdba_           4 KGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDTL   83 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCcccc
Confidence            4579999999999999999999999999999999876654432211 112244579998887776653       68999


Q ss_pred             EEccCCCCCCC--------CChhhHHHHHHHHHHHHHHHHHHHHhC-CCCCCCeEEEeccceecCCcccccccCCCcchh
Q 017977          121 VNLAGTPIGTR--------WSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYC  191 (363)
Q Consensus       121 i~~a~~~~~~~--------~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~  191 (363)
                      ||+||......        ..++..+..+++|+.++..+.+++.+. ..+..++|+++|..+..+       .+..+.|.
T Consensus        84 vnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~g~iI~i~S~~~~~~-------~~~~~~Y~  156 (276)
T d1bdba_          84 IPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASRGNVIFTISNAGFYP-------NGGGPLYT  156 (276)
T ss_dssp             ECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTST-------TSSCHHHH
T ss_pred             cccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcCCCceeeeechhccC-------CCCCchHH
Confidence            99999642211        112246788999999988887777543 122356888888744332       33445677


Q ss_pred             hhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc-----cchH---HHHHH-HhCCCCCCCCCccc
Q 017977          192 AKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL-----AKMI---PLFMM-FAGGPLGSGQQWFS  262 (363)
Q Consensus       192 ~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~-----~~~~---~~~~~-~~~~~~~~~~~~~~  262 (363)
                      .+|.+...++++  ++.     .+. . ++++..|.||.|-.+.....     ....   ..... ....|++      .
T Consensus       157 asKaal~~ltr~--lA~-----ela-~-~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~Plg------R  221 (276)
T d1bdba_         157 AAKHAIVGLVRE--LAF-----ELA-P-YVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIG------R  221 (276)
T ss_dssp             HHHHHHHHHHHH--HHH-----HHT-T-TCEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCTTS------S
T ss_pred             HHHHHHHHHHHH--HHH-----Hhh-c-ceEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCCCC------C
Confidence            776555444432  111     112 2 59999999999876532111     0000   01111 1222222      2


Q ss_pred             cccHHHHHHHHHHHhcCC--C-CCc-eEEeeCC
Q 017977          263 WIHLDDIVNLIYEALSNP--S-YRG-VINGTAP  291 (363)
Q Consensus       263 ~i~v~D~a~a~~~~~~~~--~-~~g-~~~i~~~  291 (363)
                      +..++|+|++++.++..+  . ..| .+++.+|
T Consensus       222 ~g~peeva~~v~fL~S~~~a~~itG~~i~VDGG  254 (276)
T d1bdba_         222 MPEVEEYTGAYVFFATRGDAAPATGALLNYDGG  254 (276)
T ss_dssp             CCCGGGGSHHHHHHHCHHHHTTCSSCEEEESSS
T ss_pred             CcCHHHHHHHHHHHcCCcccCCeeCcEEEECcC
Confidence            667899999999887532  2 445 7777766

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.66  E-value=2.1e-15  Score=127.67  Aligned_cols=216  Identities=16%  Similarity=0.113  Sum_probs=128.6

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCC--EEEEEeCCCCcccccCCCCC-ccccCcccccCcchHHhhcc---------CC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGKK-TRFFPGVMIAEEPQWRDCIQ---------GS  117 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~---------~~  117 (363)
                      +++||||||++.||++++++|+++|+  +|++.+|+.++.+++.+... ......+|+.|.++++++++         ++
T Consensus         3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~i   82 (250)
T d1yo6a1           3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGL   82 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCCe
Confidence            37899999999999999999999995  78999999877665543322 22345689999887766543         38


Q ss_pred             CEEEEccCCCCC----CCCChhhHHHHHHHHHHHHHHHHHHHHhC-C-C-----------CCCCeEEEeccceecCCccc
Q 017977          118 TAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES-P-E-----------GVRPSVLELVKPKYLMRAAH  180 (363)
Q Consensus       118 d~Vi~~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-~-----------~~~~~v~~SS~~~~yg~~~~  180 (363)
                      |++||+||....    ...+.+..+..+++|+.++..+.+++... + .           ....++.+|+...... ...
T Consensus        83 dilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~-~~~  161 (250)
T d1yo6a1          83 SLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSIT-DNT  161 (250)
T ss_dssp             CEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCST-TCC
T ss_pred             EEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceecccccccccccccc-CCc
Confidence            999999997433    22345567789999999998888776531 0 0           1123555555421111 000


Q ss_pred             c-cccCCCcchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCC
Q 017977          181 Q-EMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQ  259 (363)
Q Consensus       181 ~-e~~~~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (363)
                      . ....+...|..+|.+...+++       .....+. ..|+.+..+.||.|-.+-...                     
T Consensus       162 ~~~~~~~~~aY~aSKaal~~l~~-------~la~el~-~~gI~v~~i~PG~v~T~m~~~---------------------  212 (250)
T d1yo6a1         162 SGSAQFPVLAYRMSKAAINMFGR-------TLAVDLK-DDNVLVVNFCPGWVQTNLGGK---------------------  212 (250)
T ss_dssp             STTSSSCBHHHHHHHHHHHHHHH-------HHHHHTG-GGTCEEEEEECCCC----------------------------
T ss_pred             ccccchhHHHHHHHHHHHHHHHH-------HHHHHhc-ccCeEEEEEecCCCCCCCCCC---------------------
Confidence            0 001111235554433222221       1111112 238999999999886542110                     


Q ss_pred             ccccccHHHHHHHHHHHhcCCC--CCceEEeeCCCCcCH
Q 017977          260 WFSWIHLDDIVNLIYEALSNPS--YRGVINGTAPNPVRL  296 (363)
Q Consensus       260 ~~~~i~v~D~a~a~~~~~~~~~--~~g~~~i~~~~~~s~  296 (363)
                       ...+.+++.++.++..+....  ..|.|...++.|+.|
T Consensus       213 -~~~~~~e~~a~~~~~~~~~~~~~~sG~f~~~~g~p~~w  250 (250)
T d1yo6a1         213 -NAALTVEQSTAELISSFNKLDNSHNGRFFMRNLKPYEF  250 (250)
T ss_dssp             -------HHHHHHHHHHHTTCCGGGTTCEEETTEEECCC
T ss_pred             -CCCCCHHHHHHHHHHHHhcCCCCCCeEEECCCCeeCCC
Confidence             013567889999988887644  456666656565543

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.66  E-value=1.6e-15  Score=129.27  Aligned_cols=202  Identities=14%  Similarity=0.079  Sum_probs=133.3

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCC-EEEEEeCCCCcccc-------cCCCCCccccCcccccCcchHHhhcc------C
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAEL-------IFPGKKTRFFPGVMIAEEPQWRDCIQ------G  116 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~-------~~~~~~~~~~~~~d~~~~~~~~~~~~------~  116 (363)
                      .+||||||+|.||++++++|+++|+ +|+++.|+..+.+.       +...........+|+.|.+++.++++      .
T Consensus        10 gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~~~   89 (259)
T d2fr1a1          10 GTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDDVP   89 (259)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTSC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcccccccc
Confidence            4899999999999999999999998 68888887433211       11122223355689999988887764      3


Q ss_pred             CCEEEEccCCCCCCC---CChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhhh
Q 017977          117 STAVVNLAGTPIGTR---WSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAK  193 (363)
Q Consensus       117 ~d~Vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~  193 (363)
                      +|.|||+++......   ...+..+..+++|+.+..++.+++..  .+..++|++||.++.+|       .+....|...
T Consensus        90 i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~--~~~~~iv~~SS~a~~~g-------~~~~~~YaAa  160 (259)
T d2fr1a1          90 LSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRE--LDLTAFVLFSSFASAFG-------APGLGGYAPG  160 (259)
T ss_dssp             EEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTT--SCCSEEEEEEEHHHHTC-------CTTCTTTHHH
T ss_pred             ccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhc--cCCceEeeecchhhccC-------CcccHHHHHH
Confidence            689999999865532   34455677889999999999998887  67778999999976554       3333456555


Q ss_pred             hhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHH
Q 017977          194 VYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLI  273 (363)
Q Consensus       194 ~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~  273 (363)
                      |          ... +.....+.. .|++++.|.||.+.+++.... ...   .     .+.  ..-...+..+++++++
T Consensus       161 k----------a~l-~~la~~~~~-~Gi~v~~I~pg~~~~~g~~~~-~~~---~-----~~~--~~G~~~~~~~~~~~~l  217 (259)
T d2fr1a1         161 N----------AYL-DGLAQQRRS-DGLPATAVAWGTWAGSGMAEG-PVA---D-----RFR--RHGVIEMPPETACRAL  217 (259)
T ss_dssp             H----------HHH-HHHHHHHHH-TTCCCEEEEECCBC---------------------CT--TTTEECBCHHHHHHHH
T ss_pred             H----------HhH-HHHHHHHHh-CCCCEEECCCCcccCCccccc-hHH---H-----HHH--hcCCCCCCHHHHHHHH
Confidence            3          222 222222233 399999999998876643211 010   0     010  1112457899999999


Q ss_pred             HHHhcCCCCCc
Q 017977          274 YEALSNPSYRG  284 (363)
Q Consensus       274 ~~~~~~~~~~g  284 (363)
                      ..++.+.....
T Consensus       218 ~~~l~~~~~~~  228 (259)
T d2fr1a1         218 QNALDRAEVCP  228 (259)
T ss_dssp             HHHHHTTCSSC
T ss_pred             HHHHhCCCceE
Confidence            99998766443

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=2.6e-16  Score=135.65  Aligned_cols=213  Identities=15%  Similarity=0.122  Sum_probs=132.2

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEE---eCCCCcccc-------cCCCCCccccCcccccCcchHHhhcc-----
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVL---TRSRSKAEL-------IFPGKKTRFFPGVMIAEEPQWRDCIQ-----  115 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~---~r~~~~~~~-------~~~~~~~~~~~~~d~~~~~~~~~~~~-----  115 (363)
                      +.||||||++.||+++++.|+++|.+|+.+   .|+......       +...........+|+.|.+++.++++     
T Consensus         3 kVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~g   82 (285)
T d1jtva_           3 TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEG   82 (285)
T ss_dssp             EEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTS
T ss_pred             CEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhcccc
Confidence            457899999999999999999999765544   444333221       11222223345689999998887664     


Q ss_pred             CCCEEEEccCCCCCC---CCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecCCcccccccCCCcch
Q 017977          116 GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLMRAAHQEMITWLSDY  190 (363)
Q Consensus       116 ~~d~Vi~~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~  190 (363)
                      .+|++||+|+.....   ..+.+..+..+++|+.++.++.+++...  ..+..++|++||.++..+       .+....|
T Consensus        83 ~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~-------~~~~~~Y  155 (285)
T d1jtva_          83 RVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMG-------LPFNDVY  155 (285)
T ss_dssp             CCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSC-------CTTCHHH
T ss_pred             chhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCC-------CCCchHH
Confidence            479999999975543   2455677889999999988888876543  145567999999865333       3444567


Q ss_pred             hhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCc-cc---ch--------HHHH-HHH-hCCCCCC
Q 017977          191 CAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA-LA---KM--------IPLF-MMF-AGGPLGS  256 (363)
Q Consensus       191 ~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~-~~---~~--------~~~~-~~~-~~~~~~~  256 (363)
                      ..+|.+...|.++       ....+. .+|+++..+.||.+-.+-... ..   ..        ...+ +.. ...++  
T Consensus       156 ~asKaal~~l~~~-------la~El~-~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  225 (285)
T d1jtva_         156 CASKFALEGLCES-------LAVLLL-PFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQV--  225 (285)
T ss_dssp             HHHHHHHHHHHHH-------HHHHHG-GGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHH--
T ss_pred             HHHHHHHHHHHHH-------HHHHhh-ccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhh--
Confidence            7776555444332       111111 239999999999987542110 00   00        0000 000 00000  


Q ss_pred             CCCccccccHHHHHHHHHHHhcCCCC
Q 017977          257 GQQWFSWIHLDDIVNLIYEALSNPSY  282 (363)
Q Consensus       257 ~~~~~~~i~v~D~a~a~~~~~~~~~~  282 (363)
                        .......++|+|++++.++..+.+
T Consensus       226 --~~~~~~~PeeVA~~v~~~~~~~~p  249 (285)
T d1jtva_         226 --FREAAQNPEEVAEVFLTALRAPKP  249 (285)
T ss_dssp             --HHHHCBCHHHHHHHHHHHHHCSSC
T ss_pred             --hcccCCCHHHHHHHHHHHHhCCCC
Confidence              001246799999999999987653

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.65  E-value=2.1e-15  Score=127.45  Aligned_cols=174  Identities=12%  Similarity=0.046  Sum_probs=114.8

Q ss_pred             ccEEEEecCcchHHHHHHHHHH---hCCCEEEEEeCCCCcccccC---CCCCccccCcccccCcchHHhhcc--------
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQ---ADNHQVRVLTRSRSKAELIF---PGKKTRFFPGVMIAEEPQWRDCIQ--------  115 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~---~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~d~~~~~~~~~~~~--------  115 (363)
                      |++||||||++.||+++++.|+   ++|++|++.+|+.++.+.+.   ..........+|+.|.++++++++        
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~   81 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD   81 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhc
Confidence            5689999999999999999997   47999999999987754432   111222345689999887775543        


Q ss_pred             -CCCEEEEccCCCCCC----CCChhhHHHHHHHHHHHHHHHHHHHHhC-------------CCCCCCeEEEeccceecCC
Q 017977          116 -GSTAVVNLAGTPIGT----RWSSEIKKEIKESRIRVTSKVVDLINES-------------PEGVRPSVLELVKPKYLMR  177 (363)
Q Consensus       116 -~~d~Vi~~a~~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~-------------~~~~~~~v~~SS~~~~yg~  177 (363)
                       .+|++||+||.....    ....+..+..+++|+.++..+.+++...             ..+..++|.+||..+..+ 
T Consensus        82 ~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~~-  160 (248)
T d1snya_          82 QGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQ-  160 (248)
T ss_dssp             GCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCST-
T ss_pred             CCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccccC-
Confidence             489999999974332    2344557789999999998888776532             013456888988743221 


Q ss_pred             cccccccCCCcchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCC
Q 017977          178 AAHQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKD  235 (363)
Q Consensus       178 ~~~~e~~~~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~  235 (363)
                         ....+....|..+|.+...+.++       ....+.. .|+.+..+.||.|-.+.
T Consensus       161 ---~~~~~~~~~Y~aSKaal~~lt~~-------la~e~~~-~gI~vn~v~PG~v~T~m  207 (248)
T d1snya_         161 ---GNTDGGMYAYRTSKSALNAATKS-------LSVDLYP-QRIMCVSLHPGWVKTDM  207 (248)
T ss_dssp             ---TCCSCCCHHHHHHHHHHHHHHHH-------HHHHHGG-GTCEEEEECCCSBCSTT
T ss_pred             ---CCCCCChHHHHHHHHHHHHHHHH-------HHHHhCC-CCeEEEEcCCCcccCCc
Confidence               11112233566665443333321       1111222 38999999999987653

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.65  E-value=5.3e-16  Score=134.77  Aligned_cols=224  Identities=13%  Similarity=0.034  Sum_probs=135.7

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCC-----CCCccccCcccccCcchHHhhc-------c
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP-----GKKTRFFPGVMIAEEPQWRDCI-------Q  115 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~d~~~~~~~~~~~-------~  115 (363)
                      .++|+++||||+|.||+++++.|++.|++|++++|+..+......     .........+|+.+.+++..++       .
T Consensus        23 l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g  102 (294)
T d1w6ua_          23 FQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAG  102 (294)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhcc
Confidence            345799999999999999999999999999999999765432211     1112224458999888776654       3


Q ss_pred             CCCEEEEccCCCCCCC---CChhhHHHHHHHHHHHHHHHHHHHHhC---CCCCCCeEEEeccceecCCcccccccCCCcc
Q 017977          116 GSTAVVNLAGTPIGTR---WSSEIKKEIKESRIRVTSKVVDLINES---PEGVRPSVLELVKPKYLMRAAHQEMITWLSD  189 (363)
Q Consensus       116 ~~d~Vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~  189 (363)
                      ++|++||+||......   .........+.+|..+...+...+...   ......++.++|..+..+       .+....
T Consensus       103 ~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~-------~~~~~~  175 (294)
T d1w6ua_         103 HPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETG-------SGFVVP  175 (294)
T ss_dssp             SCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHC-------CTTCHH
T ss_pred             ccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhc-------ccccch
Confidence            6899999999754422   233456667788888866665443321   133444566665532111       223345


Q ss_pred             hhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc-cchHHHH-HHHhCCCCCCCCCccccccHH
Q 017977          190 YCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL-AKMIPLF-MMFAGGPLGSGQQWFSWIHLD  267 (363)
Q Consensus       190 ~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~i~v~  267 (363)
                      |..+|.+...++++       ....+. ..|+++..|.||.+-.+..... ...-... ......|++      .+...+
T Consensus       176 YsasKaal~~ltk~-------lA~ela-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~pl~------R~~~pe  241 (294)
T d1w6ua_         176 SASAKAGVEAMSKS-------LAAEWG-KYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCG------RLGTVE  241 (294)
T ss_dssp             HHHHHHHHHHHHHH-------HHHHHG-GGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTS------SCBCHH
T ss_pred             HHHHHHHHHHHHHH-------HHHHHh-HhCeEEEEEccCccccchhhhccCCcHHHHHHHhhcCCCC------CCCCHH
Confidence            66665444433321       111112 2389999999999977643211 1111111 222333332      267799


Q ss_pred             HHHHHHHHHhcCCC--CCc-eEEeeCCC
Q 017977          268 DIVNLIYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       268 D~a~a~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      |+|+++..++....  ..| ++.+.+|.
T Consensus       242 diA~~v~fL~sd~s~~itG~~i~vDGG~  269 (294)
T d1w6ua_         242 ELANLAAFLCSDYASWINGAVIKFDGGE  269 (294)
T ss_dssp             HHHHHHHHHTSGGGTTCCSCEEEESTTH
T ss_pred             HHHHHHHHHhCchhcCCCCcEEEECCCh
Confidence            99999999997543  455 77777764

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.63  E-value=1.3e-15  Score=127.64  Aligned_cols=201  Identities=14%  Similarity=0.046  Sum_probs=124.2

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHH-------hhcc--CCCEE
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWR-------DCIQ--GSTAV  120 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-------~~~~--~~d~V  120 (363)
                      +|+||||||+|.||+++++.|+++|++|.+++++..+......      ...++..+.++.+       +.+.  ++|++
T Consensus         2 gK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~l   75 (236)
T d1dhra_           2 ARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASV------IVKMTDSFTEQADQVTAEVGKLLGDQKVDAI   75 (236)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTSSEEE------ECCCCSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccccccc------eeecccCcHHHHHHHHHHHHHHhCCCCceEE
Confidence            4799999999999999999999999999999987654321111      1122222222221       2222  48999


Q ss_pred             EEccCCCCC-CC---CChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhhhhhh
Q 017977          121 VNLAGTPIG-TR---WSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYC  196 (363)
Q Consensus       121 i~~a~~~~~-~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~  196 (363)
                      ||+||.... ..   ...+..+..+++|+.++.++.+++.+......++|++||.++..+       .+....|..+|.+
T Consensus        76 InnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~-------~~~~~~Y~asKaa  148 (236)
T d1dhra_          76 LCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDG-------TPGMIGYGMAKGA  148 (236)
T ss_dssp             EECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC-------CTTBHHHHHHHHH
T ss_pred             EECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCC-------ccCCcccHHHHHH
Confidence            999985222 11   223456778999999999998888864122356999999853211       2333455555432


Q ss_pred             cccchhhHHHHHHHHHHHh-cc---CCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHH
Q 017977          197 LVSFNRGVLVCREWEGTAL-KV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL  272 (363)
Q Consensus       197 ~~~y~~~k~~~~~~~~~~~-~~---~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a  272 (363)
                                ...+.+... +.   ..|+.+..+.||.+..+..       .   ...  +   ....-.++..+|+|+.
T Consensus       149 ----------l~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~-------~---~~~--~---~~~~~~~~~pe~va~~  203 (236)
T d1dhra_         149 ----------VHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMN-------R---KSM--P---EADFSSWTPLEFLVET  203 (236)
T ss_dssp             ----------HHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHH-------H---HHS--T---TSCGGGSEEHHHHHHH
T ss_pred             ----------HHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcc-------h---hhC--c---cchhhcCCCHHHHHHH
Confidence                      222222221 21   2489999999999876421       1   000  0   0112247889999999


Q ss_pred             HHHHhcCCC--CCc-eEEe
Q 017977          273 IYEALSNPS--YRG-VING  288 (363)
Q Consensus       273 ~~~~~~~~~--~~g-~~~i  288 (363)
                      +..++....  ..| .+.+
T Consensus       204 ~~~l~s~~~~~i~G~~i~v  222 (236)
T d1dhra_         204 FHDWITGNKRPNSGSLIQV  222 (236)
T ss_dssp             HHHHHTTTTCCCTTCEEEE
T ss_pred             HHHHhCCCccCCCCCeEEE
Confidence            999987544  344 5544

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.61  E-value=4.1e-15  Score=125.77  Aligned_cols=218  Identities=16%  Similarity=0.156  Sum_probs=133.2

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCC-CccccCcccccCcchHHhhc-------cCCCE
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK-KTRFFPGVMIAEEPQWRDCI-------QGSTA  119 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~-------~~~d~  119 (363)
                      .++|.++||||++.||++++++|+++|++|++++|+.++.+...... ........|+.+.+..++..       ...|.
T Consensus         3 lkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (248)
T d2o23a1           3 VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDV   82 (248)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCcccccccccccccccccccccccccccccc
Confidence            35678999999999999999999999999999999987755433211 11112234555544443332       35788


Q ss_pred             EEEccCCCCCC---------CCChhhHHHHHHHHHHHHHHHHHHHHhC-C-------CCCCCeEEEeccceecCCccccc
Q 017977          120 VVNLAGTPIGT---------RWSSEIKKEIKESRIRVTSKVVDLINES-P-------EGVRPSVLELVKPKYLMRAAHQE  182 (363)
Q Consensus       120 Vi~~a~~~~~~---------~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~-------~~~~~~v~~SS~~~~yg~~~~~e  182 (363)
                      ++++++.....         ....+..+..+++|+.++.++.+++.+. .       .+..++|++||.++..+      
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~------  156 (248)
T d2o23a1          83 AVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEG------  156 (248)
T ss_dssp             EEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHC------
T ss_pred             cccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccC------
Confidence            88877653321         1234567788999999999999888552 0       12235999999854222      


Q ss_pred             ccCCCcchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcc-cchHHHHHHHhCCCCCCCCCcc
Q 017977          183 MITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAGGPLGSGQQWF  261 (363)
Q Consensus       183 ~~~~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  261 (363)
                       .+..+.|..+|.+...++++  +..+     +. .+|+++..|.||.+..+..... .....  ......|+.     .
T Consensus       157 -~~~~~~Y~asKaal~~lt~~--la~e-----~~-~~gIrvN~I~PG~i~T~~~~~~~~~~~~--~~~~~~pl~-----~  220 (248)
T d2o23a1         157 -QVGQAAYSASKGGIVGMTLP--IARD-----LA-PIGIRVMTIAPGLFGTPLLTSLPEKVCN--FLASQVPFP-----S  220 (248)
T ss_dssp             -CTTCHHHHHHHHHHHHHHHH--HHHH-----HG-GGTEEEEEEEECCBCCC----------C--HHHHTCSSS-----C
T ss_pred             -CCCchHHHHHHHHHHHHHHH--HHHH-----hc-ccCcceeeeccCceecchhhcCCHHHHH--HHHhcCCCC-----C
Confidence             34445677776554444332  1111     11 2389999999999876532211 11111  112222221     1


Q ss_pred             ccccHHHHHHHHHHHhcCCCCCc-eEE
Q 017977          262 SWIHLDDIVNLIYEALSNPSYRG-VIN  287 (363)
Q Consensus       262 ~~i~v~D~a~a~~~~~~~~~~~g-~~~  287 (363)
                      .+..++|+|++++.+++..-..| +++
T Consensus       221 R~g~peevA~~v~fL~s~~~itGq~I~  247 (248)
T d2o23a1         221 RLGDPAEYAHLVQAIIENPFLNGEVIR  247 (248)
T ss_dssp             SCBCHHHHHHHHHHHHHCTTCCSCEEE
T ss_pred             CCcCHHHHHHHHHHHHhCCCCCceEeE
Confidence            26789999999999987543344 444

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=1.5e-15  Score=130.41  Aligned_cols=124  Identities=17%  Similarity=0.042  Sum_probs=91.7

Q ss_pred             cEE-EEecCcchHHHHHHHHHHhC-CCEEEEEeCCCCccccc----CCCCCccccCcccccCcchHHhhcc-------CC
Q 017977           51 MTV-SVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------GS  117 (363)
Q Consensus        51 ~~v-lVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~-------~~  117 (363)
                      |+| |||||++.||+++++.|+++ |++|++.+|+.++.+..    ........+..+|+.|.++++++++       .+
T Consensus         3 ~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~i   82 (275)
T d1wmaa1           3 IHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGL   82 (275)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSE
T ss_pred             CeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCCc
Confidence            555 99999999999999999985 89999999998764332    2222223355689999888776653       68


Q ss_pred             CEEEEccCCCCCCCC---ChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEecccee
Q 017977          118 TAVVNLAGTPIGTRW---SSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKY  174 (363)
Q Consensus       118 d~Vi~~a~~~~~~~~---~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~  174 (363)
                      |++|||||.......   ..+..+..+++|+.++..+.+++.+.-....++|++||.++.
T Consensus        83 DiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~~  142 (275)
T d1wmaa1          83 DVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSV  142 (275)
T ss_dssp             EEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHH
T ss_pred             EEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccee
Confidence            999999997544322   233456689999999999999998751122469999997543

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.60  E-value=1.5e-14  Score=122.88  Aligned_cols=208  Identities=12%  Similarity=0.005  Sum_probs=136.5

Q ss_pred             CccEEEEecCcchHHHHHHHHHHh---CCCEEEEEeCCCCcccccCC------CCCccccCcccccCcchHHhhcc----
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQA---DNHQVRVLTRSRSKAELIFP------GKKTRFFPGVMIAEEPQWRDCIQ----  115 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~---~g~~V~~~~r~~~~~~~~~~------~~~~~~~~~~d~~~~~~~~~~~~----  115 (363)
                      .++.++||||++.||++++++|++   +|++|++++|+.++.+....      .........+|+.+.++++++++    
T Consensus         5 ~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~~   84 (259)
T d1oaaa_           5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRE   84 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            457899999999999999999985   79999999998876544321      11122345689999888776652    


Q ss_pred             -------CCCEEEEccCCCCCC------CCChhhHHHHHHHHHHHHHHHHHHHHhC-CCC---CCCeEEEeccceecCCc
Q 017977          116 -------GSTAVVNLAGTPIGT------RWSSEIKKEIKESRIRVTSKVVDLINES-PEG---VRPSVLELVKPKYLMRA  178 (363)
Q Consensus       116 -------~~d~Vi~~a~~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~---~~~~v~~SS~~~~yg~~  178 (363)
                             ..|++||+||.....      ..+.+..+.++++|+.++..+.+++.+. ...   ..++|++||..+..+  
T Consensus        85 ~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~~--  162 (259)
T d1oaaa_          85 LPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQP--  162 (259)
T ss_dssp             SCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSC--
T ss_pred             hhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccCC--
Confidence                   357899999864321      2344667889999999999999999875 221   236899998854222  


Q ss_pred             ccccccCCCcchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCC------cccchHHHHHHHhCC
Q 017977          179 AHQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGG------ALAKMIPLFMMFAGG  252 (363)
Q Consensus       179 ~~~e~~~~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~------~~~~~~~~~~~~~~~  252 (363)
                           .+....|..+|.+...++++         ... ...|+++..+.||.+..+...      ........+...  .
T Consensus       163 -----~~~~~~Y~asKaal~~lt~~---------la~-e~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~--~  225 (259)
T d1oaaa_         163 -----YKGWGLYCAGKAARDMLYQV---------LAA-EEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKL--K  225 (259)
T ss_dssp             -----CTTCHHHHHHHHHHHHHHHH---------HHH-HCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHH--H
T ss_pred             -----CccchHHHHHHHHHHHHHHH---------HHh-CCCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhc--C
Confidence                 33445677776555444432         111 135999999999998765210      001111111110  0


Q ss_pred             CCCCCCCccccccHHHHHHHHHHHhcCCC
Q 017977          253 PLGSGQQWFSWIHLDDIVNLIYEALSNPS  281 (363)
Q Consensus       253 ~~~~~~~~~~~i~v~D~a~a~~~~~~~~~  281 (363)
                      +.+      .+..++|+|++++.+++...
T Consensus       226 ~~~------r~~~p~evA~~i~~ll~~~s  248 (259)
T d1oaaa_         226 SDG------ALVDCGTSAQKLLGLLQKDT  248 (259)
T ss_dssp             HTT------CSBCHHHHHHHHHHHHHHCC
T ss_pred             CCC------CCCCHHHHHHHHHHHhhhcc
Confidence            111      25779999999999987544

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.59  E-value=5.5e-15  Score=125.79  Aligned_cols=223  Identities=13%  Similarity=0.034  Sum_probs=136.0

Q ss_pred             CccEEEEecCcc--hHHHHHHHHHHhCCCEEEEEeCCCCccccc---CCCCCccccCcccccCcchHHhhc-------cC
Q 017977           49 SQMTVSVTGATG--FIGRRLVQRLQADNHQVRVLTRSRSKAELI---FPGKKTRFFPGVMIAEEPQWRDCI-------QG  116 (363)
Q Consensus        49 ~~~~vlVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~~~~~~~~~d~~~~~~~~~~~-------~~  116 (363)
                      ..|+||||||+|  .||+++++.|+++|++|++.+|++......   ............|..+..+....+       ..
T Consensus         4 ~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (258)
T d1qsga_           4 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPK   83 (258)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSS
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhcccc
Confidence            457999999999  799999999999999999999986543221   111111113334555555444433       35


Q ss_pred             CCEEEEccCCCCCCC--------CChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCc
Q 017977          117 STAVVNLAGTPIGTR--------WSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLS  188 (363)
Q Consensus       117 ~d~Vi~~a~~~~~~~--------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~  188 (363)
                      .|++||+++......        ...+.....+..|+.+...+.+++.......+.+|++||.++..+       .+...
T Consensus        84 ~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~-------~~~~~  156 (258)
T d1qsga_          84 FDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERA-------IPNYN  156 (258)
T ss_dssp             EEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSB-------CTTTT
T ss_pred             cceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhccC-------CCCcH
Confidence            699999998753322        122335567788888888888888764223344788888743221       23334


Q ss_pred             chhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHH-HHHhCCCCCCCCCccccccHH
Q 017977          189 DYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLD  267 (363)
Q Consensus       189 ~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~  267 (363)
                      .|..+|.+...+.++       ....+. .+|+++..|+||.|..+............ ......|++      .+..++
T Consensus       157 ~Y~~sKaal~~ltr~-------lA~el~-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~------R~~~pe  222 (258)
T d1qsga_         157 VMGLAKASLEANVRY-------MANAMG-PEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIR------RTVTIE  222 (258)
T ss_dssp             HHHHHHHHHHHHHHH-------HHHHHT-TTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTS------SCCCHH
T ss_pred             HHHHHHHHHHHHHHH-------HHHHhC-ccCceeecccccccccccccccchhhhHHHHHHhCCCCC------CCcCHH
Confidence            566665443333321       111111 24899999999999877532211111111 222223332      267799


Q ss_pred             HHHHHHHHHhcCCC--CCc-eEEeeCCC
Q 017977          268 DIVNLIYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       268 D~a~a~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      |+|+++..++.+..  ..| ++.+.+|.
T Consensus       223 eia~~v~fL~s~~s~~itG~~i~vDGG~  250 (258)
T d1qsga_         223 DVGNSAAFLCSDLSAGISGEVVHVDGGF  250 (258)
T ss_dssp             HHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHHhCchhcCccCceEEECcCH
Confidence            99999999996543  455 77777764

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.59  E-value=3.9e-15  Score=124.76  Aligned_cols=202  Identities=13%  Similarity=0.019  Sum_probs=121.2

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcc-------hHHhhc--cCCCEEE
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEP-------QWRDCI--QGSTAVV  121 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~-------~~~~~~--~~~d~Vi  121 (363)
                      .|||||||+|.||++++++|+++|++|++++|+..+......      ....+..+.+       .+...+  ..+|++|
T Consensus         3 gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~li   76 (235)
T d1ooea_           3 GKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNI------LVDGNKNWTEQEQSILEQTASSLQGSQVDGVF   76 (235)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSSEEE------ECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhcccccc------eeccccCchhHHHHHHHHHHHHhcCCCeeEEE
Confidence            489999999999999999999999999999998754322111      1112222111       222222  3589999


Q ss_pred             EccCCCCC-CCCC---hhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhc
Q 017977          122 NLAGTPIG-TRWS---SEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCL  197 (363)
Q Consensus       122 ~~a~~~~~-~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~  197 (363)
                      ||||.... ....   .+..+..+++|+.++..+.+++.+......++|++||.++..+       .+....|..+|.+.
T Consensus        77 nnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~-------~~~~~~Y~asKaal  149 (235)
T d1ooea_          77 CVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGP-------TPSMIGYGMAKAAV  149 (235)
T ss_dssp             ECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC-------CTTBHHHHHHHHHH
T ss_pred             ECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCC-------cccccchHHHHHHH
Confidence            99996332 1111   2345667999999998888888764122356999998854322       23334565554332


Q ss_pred             ccchhhHHHHHHHHHHHhcc---CCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHHHHH
Q 017977          198 VSFNRGVLVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY  274 (363)
Q Consensus       198 ~~y~~~k~~~~~~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~  274 (363)
                      ..+.         .....+.   ..++.+..+.|+.+-.+.       ..  .....      .....++..+|+++.++
T Consensus       150 ~~l~---------~~la~e~~~~~~~i~v~~i~Pg~~~T~~-------~~--~~~~~------~~~~~~~~~~~va~~~~  205 (235)
T d1ooea_         150 HHLT---------SSLAAKDSGLPDNSAVLTIMPVTLDTPM-------NR--KWMPN------ADHSSWTPLSFISEHLL  205 (235)
T ss_dssp             HHHH---------HHHHSTTSSCCTTCEEEEEEESCBCCHH-------HH--HHSTT------CCGGGCBCHHHHHHHHH
T ss_pred             HHHH---------HHHHHHhccCCCceEEEEEecCcCcCcc-------hh--hhCcC------CccccCCCHHHHHHHHH
Confidence            2221         1111122   237899999999875431       11  01111      11234788999999988


Q ss_pred             HHhcCCC---CCc-eEEee
Q 017977          275 EALSNPS---YRG-VINGT  289 (363)
Q Consensus       275 ~~~~~~~---~~g-~~~i~  289 (363)
                      ..+..+.   ..| .+.+.
T Consensus       206 ~~l~~~~~~~~tG~~i~v~  224 (235)
T d1ooea_         206 KWTTETSSRPSSGALLKIT  224 (235)
T ss_dssp             HHHHCGGGCCCTTCEEEEE
T ss_pred             HHhcCccccCCCceEEEEE
Confidence            6664432   345 55553

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.56  E-value=3.1e-14  Score=119.77  Aligned_cols=213  Identities=20%  Similarity=0.139  Sum_probs=130.5

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc------CCCEEEEcc
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ------GSTAVVNLA  124 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~------~~d~Vi~~a  124 (363)
                      |++|||||++.||+++++.|+++|++|++++|+.+..+..        ....|+.+......+..      ..+.+++++
T Consensus         2 K~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~--------~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (241)
T d1uaya_           2 RSALVTGGASGLGRAAALALKARGYRVVVLDLRREGEDLI--------YVEGDVTREEDVRRAVARAQEEAPLFAVVSAA   73 (241)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCSSSSE--------EEECCTTCHHHHHHHHHHHHHHSCEEEEEECC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcccccce--------EeeccccchhhhHHHHHhhhccccccchhhhh
Confidence            6899999999999999999999999999999987653322        22345554443333321      334555554


Q ss_pred             CCCCC-------CCCChhhHHHHHHHHHHHHHHHHHHHHhC--------CCCCCCeEEEeccceecCCcccccccCCCcc
Q 017977          125 GTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINES--------PEGVRPSVLELVKPKYLMRAAHQEMITWLSD  189 (363)
Q Consensus       125 ~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--------~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~  189 (363)
                      +....       .....+..+..+++|+.+...+...+...        ..+..++|++||..+..+       .+....
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~-------~~~~~~  146 (241)
T d1uaya_          74 GVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEG-------QIGQAA  146 (241)
T ss_dssp             CCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHC-------CTTCHH
T ss_pred             hccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccC-------CCCchh
Confidence            43222       12334566788999999988877766431        123346999999854332       344456


Q ss_pred             hhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHH-HHHhCCCCCCCCCccccccHHH
Q 017977          190 YCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDD  268 (363)
Q Consensus       190 ~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D  268 (363)
                      |..+|.+...++++  ++.     .+. .+|+++..|.||.+..+.....  ..... ......++.     ..+..++|
T Consensus       147 Y~asKaal~~lt~~--lA~-----ela-~~gIrVN~V~PG~i~T~~~~~~--~~~~~~~~~~~~~~~-----~R~g~ped  211 (241)
T d1uaya_         147 YAASKGGVVALTLP--AAR-----ELA-GWGIRVVTVAPGLFDTPLLQGL--PEKAKASLAAQVPFP-----PRLGRPEE  211 (241)
T ss_dssp             HHHHHHHHHHHHHH--HHH-----HHG-GGTEEEEEEEECSCSSHHHHTS--CHHHHHHHHTTCCSS-----CSCCCHHH
T ss_pred             hHHHHHHHHHHHHH--HHH-----HHh-hcCCceeeecCCcccccccchh--hhhHHHHHHhcCCCC-----CCCcCHHH
Confidence            77776555444432  111     111 2389999999999876522110  11111 222222221     12567999


Q ss_pred             HHHHHHHHhcCCCCCc-eEEeeCCCC
Q 017977          269 IVNLIYEALSNPSYRG-VINGTAPNP  293 (363)
Q Consensus       269 ~a~a~~~~~~~~~~~g-~~~i~~~~~  293 (363)
                      +|+++..+++..-..| ++.+.+|-.
T Consensus       212 vA~~v~fL~s~~~iTG~~i~VDGG~~  237 (241)
T d1uaya_         212 YAALVLHILENPMLNGEVVRLDGALR  237 (241)
T ss_dssp             HHHHHHHHHHCTTCCSCEEEESTTCC
T ss_pred             HHHHHHHHHhCCCCCCCEEEECCccc
Confidence            9999999998544455 777777643

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=6.2e-15  Score=126.01  Aligned_cols=206  Identities=13%  Similarity=0.071  Sum_probs=131.1

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCC-----CCCccccCcccccCcchHHhh-------cc
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP-----GKKTRFFPGVMIAEEPQWRDC-------IQ  115 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~d~~~~~~~~~~-------~~  115 (363)
                      ..+++++||||++.||+++++.|+++|++|++++|+.++.+....     .........+|..+.+.....       +.
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g   91 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG   91 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhC
Confidence            455799999999999999999999999999999999876543321     111111223455554444333       33


Q ss_pred             CCCEEEEccCCCCCCC---CChhhHHHHHHHHHHHHHHHHHHHHhC-CCCCCCeEEEeccceecCCcccccccCCCcchh
Q 017977          116 GSTAVVNLAGTPIGTR---WSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYC  191 (363)
Q Consensus       116 ~~d~Vi~~a~~~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~  191 (363)
                      .+|+++++|+......   .+.+..+..+++|+.++..+.+++... ..+..++|++||.++..+       .+....|.
T Consensus        92 ~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~~~~-------~p~~~~Y~  164 (269)
T d1xu9a_          92 GLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVA-------YPMVAAYS  164 (269)
T ss_dssp             SCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSC-------CTTCHHHH
T ss_pred             CccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchhcCC-------CCCchHHH
Confidence            6899999998754422   355667788999999988887777643 223457999998855333       34445677


Q ss_pred             hhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCCCCCCCCccccccHHHHHH
Q 017977          192 AKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVN  271 (363)
Q Consensus       192 ~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  271 (363)
                      .+|.+...|.++  +    ..+......++.+..+.||.|-.+.       ..  ....      +.........+++|+
T Consensus       165 asKaal~~~~~~--L----a~El~~~~~~I~V~~v~PG~v~T~~-------~~--~~~~------~~~~~~~~~~e~~a~  223 (269)
T d1xu9a_         165 ASKFALDGFFSS--I----RKEYSVSRVNVSITLCVLGLIDTET-------AM--KAVS------GIVHMQAAPKEECAL  223 (269)
T ss_dssp             HHHHHHHHHHHH--H----HHHHHHHTCCCEEEEEEECCBCCHH-------HH--HHSC------GGGGGGCBCHHHHHH
T ss_pred             HHHHHHHHHHHH--H----HHHhhhcCCCEEEEEEecCcCCCcH-------HH--Hhcc------CCccccCCCHHHHHH
Confidence            776555444432  1    1111122347999999999885431       10  0000      111223567899999


Q ss_pred             HHHHHhcCCC
Q 017977          272 LIYEALSNPS  281 (363)
Q Consensus       272 a~~~~~~~~~  281 (363)
                      .++..+....
T Consensus       224 ~i~~~~~~~~  233 (269)
T d1xu9a_         224 EIIKGGALRQ  233 (269)
T ss_dssp             HHHHHHHTTC
T ss_pred             HHHHHhhcCC
Confidence            9988776543

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.50  E-value=1.2e-13  Score=118.32  Aligned_cols=222  Identities=11%  Similarity=0.022  Sum_probs=123.3

Q ss_pred             CccEEEEecCcc--hHHHHHHHHHHhCCCEEEEEeCCCCcccc---cCCCCCccccCcccccCcchHHhhc-------cC
Q 017977           49 SQMTVSVTGATG--FIGRRLVQRLQADNHQVRVLTRSRSKAEL---IFPGKKTRFFPGVMIAEEPQWRDCI-------QG  116 (363)
Q Consensus        49 ~~~~vlVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~~~~~~~~~~~~d~~~~~~~~~~~-------~~  116 (363)
                      ..|++|||||+|  .||+++++.|+++|++|++++|++...+.   +............|+.+.+++.+++       ..
T Consensus         4 ~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~   83 (274)
T d2pd4a1           4 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGS   83 (274)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             CCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHcCC
Confidence            457999999987  79999999999999999999998643221   1111121224456777776665554       36


Q ss_pred             CCEEEEccCCCCCCC----CChh---hHHHHHHHHHHHHHHHHHHHHhCCCCCCC-eEEEeccceecCCcccccccCCCc
Q 017977          117 STAVVNLAGTPIGTR----WSSE---IKKEIKESRIRVTSKVVDLINESPEGVRP-SVLELVKPKYLMRAAHQEMITWLS  188 (363)
Q Consensus       117 ~d~Vi~~a~~~~~~~----~~~~---~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~v~~SS~~~~yg~~~~~e~~~~~~  188 (363)
                      +|++||+++......    ....   .....+..+..+.........+. .+... ++..|+. +..+      ..+...
T Consensus        84 id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~s~~-~~~~------~~~~~~  155 (274)
T d2pd4a1          84 LDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPL-LNNGASVLTLSYL-GSTK------YMAHYN  155 (274)
T ss_dssp             EEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG-EEEEEEEEEEECG-GGTS------BCTTCH
T ss_pred             CCeEEeecccccccccccccccccchhhhhhhccccccccccccccccc-cccCcceeeeccc-cccc------ccccch
Confidence            899999999743311    1111   12223333333444555554442 12223 3444443 2111      112223


Q ss_pred             chhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHH-HHHhCCCCCCCCCccccccHH
Q 017977          189 DYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLD  267 (363)
Q Consensus       189 ~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~  267 (363)
                      .|..+|.+...++++       ....+. ..|+++..+.|+.+..+........-... ......+++      .+..++
T Consensus       156 ~y~asK~al~~ltr~-------lA~e~~-~~GIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~------r~~~pe  221 (274)
T d2pd4a1         156 VMGLAKAALESAVRY-------LAVDLG-KHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLR------KNVSLE  221 (274)
T ss_dssp             HHHHHHHHHHHHHHH-------HHHHHH-TTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTS------SCCCHH
T ss_pred             hhhHHHHHHHHHHHh-------hHHHhc-CcCceecccccCcccCccccccCchHHHHHHHhhhhhcc------CCcCHH
Confidence            455554333333221       111121 24899999999999876432211111111 111222221      367899


Q ss_pred             HHHHHHHHHhcCCC--CCc-eEEeeCCC
Q 017977          268 DIVNLIYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       268 D~a~a~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      |+|+++..++....  ..| ++.+.+|.
T Consensus       222 dIA~~v~fL~S~~s~~itG~~i~vDGG~  249 (274)
T d2pd4a1         222 EVGNAGMYLLSSLSSGVSGEVHFVDAGY  249 (274)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHHhChhhCCCcCceEEECCCh
Confidence            99999999997543  455 77777764

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.49  E-value=5.5e-13  Score=114.83  Aligned_cols=221  Identities=12%  Similarity=0.050  Sum_probs=128.0

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCccc-ccC-------CC---------------CCccccCcccccCc
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE-LIF-------PG---------------KKTRFFPGVMIAEE  107 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~-------~~---------------~~~~~~~~~d~~~~  107 (363)
                      ..++||||++.||+++++.|+++|++|++.+|+..+.. .+.       ..               ........+|+.+.
T Consensus         3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~   82 (284)
T d1e7wa_           3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF   82 (284)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCH
Confidence            46899999999999999999999999999887653311 100       00               00001223567777


Q ss_pred             chHHhhc-------cCCCEEEEccCCCCCCCCCh-----------------hhHHHHHHHHHHHHHHHHHHHHhC-----
Q 017977          108 PQWRDCI-------QGSTAVVNLAGTPIGTRWSS-----------------EIKKEIKESRIRVTSKVVDLINES-----  158 (363)
Q Consensus       108 ~~~~~~~-------~~~d~Vi~~a~~~~~~~~~~-----------------~~~~~~~~~n~~~~~~l~~~~~~~-----  158 (363)
                      +++++++       .++|++||+||.........                 .....++.+|+.+...+.+++.+.     
T Consensus        83 ~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~  162 (284)
T d1e7wa_          83 TRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTP  162 (284)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSC
T ss_pred             HHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhhH
Confidence            7776655       36899999999754422211                 112346788999988887775431     


Q ss_pred             ---CCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCC
Q 017977          159 ---PEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKD  235 (363)
Q Consensus       159 ---~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~  235 (363)
                         ..+...+|.++|....       ...+....|..+|.+...++++       ....+.. .|+++..|.||.+-...
T Consensus       163 ~~~~~~~~~ii~~~s~~~~-------~~~~~~~~Y~asKaal~~lt~~-------lA~el~~-~gIrvN~I~PG~t~~~~  227 (284)
T d1e7wa_         163 AKHRGTNYSIINMVDAMTN-------QPLLGYTIYTMAKGALEGLTRS-------AALELAP-LQIRVNGVGPGLSVLVD  227 (284)
T ss_dssp             GGGSCSCEEEEEECCTTTT-------SCCTTCHHHHHHHHHHHHHHHH-------HHHHHGG-GTEEEEEEEESSBCCGG
T ss_pred             HHhcCCCCccccccccccc-------CCccceeeeccccccchhhhHH-------HHHHhCC-ccccccccccccccccc
Confidence               1222345556555221       1123334676666554444321       1111222 38999999999632221


Q ss_pred             CCcccchHHHH-HHHhCCCCCCCCCccccccHHHHHHHHHHHhcCCC--CCc-eEEeeCCCCcC
Q 017977          236 GGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS--YRG-VINGTAPNPVR  295 (363)
Q Consensus       236 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~--~~g-~~~i~~~~~~s  295 (363)
                      ...    .... ......|+.     ..+...+|+|+++..++....  ..| .+.+.+|..++
T Consensus       228 ~~~----~~~~~~~~~~~pl~-----~R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG~sl~  282 (284)
T d1e7wa_         228 DMP----PAVWEGHRSKVPLY-----QRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT  282 (284)
T ss_dssp             GSC----HHHHHHHHTTCTTT-----TSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             cCC----HHHHHHHHhcCCCC-----CCCCCHHHHHHHHHHHhCchhcCccCCeEEECcChhcc
Confidence            111    1111 222222221     126789999999999986543  455 77777775443

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.45  E-value=1.5e-12  Score=112.77  Aligned_cols=227  Identities=11%  Similarity=-0.008  Sum_probs=129.1

Q ss_pred             CCCCccEEEEecCcc--hHHHHHHHHHHhCCCEEEEEeCCCCc-------------ccccCCCCCc--------------
Q 017977           46 QKASQMTVSVTGATG--FIGRRLVQRLQADNHQVRVLTRSRSK-------------AELIFPGKKT--------------   96 (363)
Q Consensus        46 ~~~~~~~vlVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~-------------~~~~~~~~~~--------------   96 (363)
                      ...++|++|||||+|  .||+++++.|+++|++|++.+|++..             ..........              
T Consensus         4 ~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (297)
T d1d7oa_           4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFD   83 (297)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCC
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhcc
Confidence            345668999999987  89999999999999999999885321             0000000000              


Q ss_pred             -cccCccc--------ccCcchHHhh-------ccCCCEEEEccCCCCC-----CCCChhhHHHHHHHHHHHHHHHHHHH
Q 017977           97 -RFFPGVM--------IAEEPQWRDC-------IQGSTAVVNLAGTPIG-----TRWSSEIKKEIKESRIRVTSKVVDLI  155 (363)
Q Consensus        97 -~~~~~~d--------~~~~~~~~~~-------~~~~d~Vi~~a~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~  155 (363)
                       ......|        ..+.+..+++       +.++|++||+||....     ...+.+.....+++|+.+...+.+++
T Consensus        84 ~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~  163 (297)
T d1d7oa_          84 NPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHF  163 (297)
T ss_dssp             SGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             ccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHH
Confidence             0000011        1222222322       3468999999986321     23456677889999999999999998


Q ss_pred             HhCCCCCCCeEEEeccceecCCcccccccCCCcchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCC
Q 017977          156 NESPEGVRPSVLELVKPKYLMRAAHQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKD  235 (363)
Q Consensus       156 ~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~  235 (363)
                      ..........+.+++.+....      ..+....|...|.....+.+      .+..+... ..|+++..|.||.+..+.
T Consensus       164 ~~~~~~~g~~~~~~~~~~~~~------~~~~~~~y~~aKaa~~~l~~------~~a~e~~~-~~gIrvN~I~PG~i~T~~  230 (297)
T d1d7oa_         164 LPIMNPGGASISLTYIASERI------IPGYGGGMSSAKAALESDTR------VLAFEAGR-KQNIRVNTISAGPLGSRA  230 (297)
T ss_dssp             GGGEEEEEEEEEEECGGGTSC------CTTCTTTHHHHHHHHHHHHH------HHHHHHHH-HHCCEEEEEEECCCBCCC
T ss_pred             HHHhhcCCcceeeeehhhccc------ccccccceeccccccccccc------ccchhccc-cceEEecccccccccchh
Confidence            874112223555555522111      01222345544322211111      11111111 138999999999998875


Q ss_pred             CCcccchHHHH-HHHhCCCCCCCCCccccccHHHHHHHHHHHhcCCC--CCc-eEEeeCC
Q 017977          236 GGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       236 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      .......-... ......|++      .+...+|+|++++.++....  ..| ++.+.+|
T Consensus       231 ~~~~~~~~~~~~~~~~~~Plg------R~~~peevA~~v~fL~S~~a~~itGq~i~vDGG  284 (297)
T d1d7oa_         231 AKAIGFIDTMIEYSYNNAPIQ------KTLTADEVGNAAAFLVSPLASAITGATIYVDNG  284 (297)
T ss_dssp             SSCCSHHHHHHHHHHHHSSSC------CCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             hhhccCCHHHHHHHHhCCCCC------CCCCHHHHHHHHHHHhCchhcCCcCceEEECcC
Confidence            43321111111 122223333      26789999999999986543  455 6777665

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.39  E-value=2.9e-12  Score=108.56  Aligned_cols=218  Identities=12%  Similarity=0.041  Sum_probs=109.1

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchH--------HhhccCCCEEE
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW--------RDCIQGSTAVV  121 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~--------~~~~~~~d~Vi  121 (363)
                      ||.|+||||++.||++++++|+++|++|++++|+..+...             |+.+.+..        .+....+|+++
T Consensus         1 mkVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~~~~-------------d~~~~~~~~~~~~~~~~~~~~~id~lv   67 (257)
T d1fjha_           1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA-------------DLSTAEGRKQAIADVLAKCSKGMDGLV   67 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-------------CTTSHHHHHHHHHHHHTTCTTCCSEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHHHHH-------------HhcCHHHHHHHHHHHHHHhCCCCcEEE
Confidence            5678999999999999999999999999999997654321             22222211        12223589999


Q ss_pred             EccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeEEEeccceecC---CcccccccCCCc--------
Q 017977          122 NLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLELVKPKYLM---RAAHQEMITWLS--------  188 (363)
Q Consensus       122 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~v~~SS~~~~yg---~~~~~e~~~~~~--------  188 (363)
                      ++|+...    ..........+|..+...+.+.....  .........+++....+-   ..+.........        
T Consensus        68 ~~Ag~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~s~~  143 (257)
T d1fjha_          68 LCAGLGP----QTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIV  143 (257)
T ss_dssp             ECCCCCT----TCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHH
T ss_pred             EcCCCCC----cHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcEEEEeeeh
Confidence            9998632    22234556677777776665554331  133333444444321111   000000000000        


Q ss_pred             chhhhhhhcccchhhHHHHHHHHHH---HhccCCCceEEEEeeceEEeCCCCcccchHHHH-HHHhC-CCCCCCCCcccc
Q 017977          189 DYCAKVYCLVSFNRGVLVCREWEGT---ALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAG-GPLGSGQQWFSW  263 (363)
Q Consensus       189 ~~~~~~~~~~~y~~~k~~~~~~~~~---~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~  263 (363)
                      ...........|..+|.....+-+.   .+. .+|+++..|.||.+-.+.......--... ...+. .|++      .+
T Consensus       144 ~~~~~~~~~~~Y~asKaal~~ltr~lA~el~-~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~Plg------R~  216 (257)
T d1fjha_         144 EHAGEQGGNLAYAGSKNALTVAVRKRAAAWG-EAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMG------RR  216 (257)
T ss_dssp             HTCCTTHHHHHHHHHHHHHHHHHHHTHHHHH-HTTCEEEEEEECC---------------------CCCSTT------SC
T ss_pred             hccCCCcchHHHHHHhhhhhccccccccccc-cccccccccccCCcCChhHHhhcCCHHHHHHHHhcCCCCC------CC
Confidence            0000000112244444222222111   111 14899999999999766321100000000 00111 1221      26


Q ss_pred             ccHHHHHHHHHHHhcCCC--CCc-eEEeeCC
Q 017977          264 IHLDDIVNLIYEALSNPS--YRG-VINGTAP  291 (363)
Q Consensus       264 i~v~D~a~a~~~~~~~~~--~~g-~~~i~~~  291 (363)
                      ...+|+|+++..++....  ..| ++.+.+|
T Consensus       217 g~p~eva~~v~fL~S~~s~~itG~~i~vDGG  247 (257)
T d1fjha_         217 AEPSEMASVIAFLMSPAASYVHGAQIVIDGG  247 (257)
T ss_dssp             CCTHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             cCHHHHHHHHHHHhCchhCCccCceEEeCCC
Confidence            789999999999986543  455 6666655

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.36  E-value=3.7e-12  Score=108.51  Aligned_cols=224  Identities=13%  Similarity=0.047  Sum_probs=127.7

Q ss_pred             CCccEEEEecCcc--hHHHHHHHHHHhCCCEEEEEeCCCCcccc-cCCC-CCccccCcccccCcchHHhhc---------
Q 017977           48 ASQMTVSVTGATG--FIGRRLVQRLQADNHQVRVLTRSRSKAEL-IFPG-KKTRFFPGVMIAEEPQWRDCI---------  114 (363)
Q Consensus        48 ~~~~~vlVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~-~~~~~~~~~d~~~~~~~~~~~---------  114 (363)
                      ...|++|||||+|  .||+++++.|+++|++|++.+|+..+..+ +.+. ........+|+.+.+++..++         
T Consensus         4 l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~~   83 (268)
T d2h7ma1           4 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGA   83 (268)
T ss_dssp             TTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCT
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhcccc
Confidence            3457999999765  59999999999999999999998765422 2111 112224457888776554443         


Q ss_pred             -cCCCEEEEccCCCCCC--------CCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEeccceecCCcccccccC
Q 017977          115 -QGSTAVVNLAGTPIGT--------RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVKPKYLMRAAHQEMIT  185 (363)
Q Consensus       115 -~~~d~Vi~~a~~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~~~~yg~~~~~e~~~  185 (363)
                       ..+|+++|+++.....        ..........+..|.........+.... ......++++|...       ....|
T Consensus        84 ~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~s~~~-------~~~~p  155 (268)
T d2h7ma1          84 GNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPI-MNPGGSIVGMDFDP-------SRAMP  155 (268)
T ss_dssp             TCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG-EEEEEEEEEEECCC-------SSCCT
T ss_pred             CCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhh-cccccccccccccc-------cccCc
Confidence             2469999999864221        1223445556777777777777777653 12222444444422       11122


Q ss_pred             CCcchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCC--------Cc-ccchHHHH--HHHhCCCC
Q 017977          186 WLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDG--------GA-LAKMIPLF--MMFAGGPL  254 (363)
Q Consensus       186 ~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~--------~~-~~~~~~~~--~~~~~~~~  254 (363)
                      ....|..+|.+...+.+       .....+. ..|+++..|.||.+-.+..        .. .......+  ......|+
T Consensus       156 ~~~~y~~sK~a~~~ltr-------~lA~e~~-~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl  227 (268)
T d2h7ma1         156 AYNWMTVAKSALESVNR-------FVAREAG-KYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPI  227 (268)
T ss_dssp             TTHHHHHHHHHHHHHHH-------HHHHHHH-TTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTT
T ss_pred             ccchhhccccchhhccc-------cchhhhh-ccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcCCC
Confidence            23345555433322221       1111111 2389999999998875421        10 00111111  11122222


Q ss_pred             CCCCCccccccHHHHHHHHHHHhcCCC--CCc-eEEeeCCC
Q 017977          255 GSGQQWFSWIHLDDIVNLIYEALSNPS--YRG-VINGTAPN  292 (363)
Q Consensus       255 ~~~~~~~~~i~v~D~a~a~~~~~~~~~--~~g-~~~i~~~~  292 (363)
                      +     +.+..++|+|+++..++....  ..| ++.+.+|.
T Consensus       228 ~-----rr~~~p~dva~~v~fL~Sd~a~~iTG~~i~vDGG~  263 (268)
T d2h7ma1         228 G-----WNMKDATPVAKTVCALLSDWLPATTGDIIYADGGA  263 (268)
T ss_dssp             C-----CCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTG
T ss_pred             C-----CCCCCHHHHHHHHHHHhCchhcCccCCEEEECcCc
Confidence            2     235679999999999996543  455 67777764

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.34  E-value=1.6e-11  Score=104.32  Aligned_cols=219  Identities=15%  Similarity=0.070  Sum_probs=121.4

Q ss_pred             EEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccc-c----CCC-CCccccCcccccC----cchHHh-------hc
Q 017977           52 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL-I----FPG-KKTRFFPGVMIAE----EPQWRD-------CI  114 (363)
Q Consensus        52 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~----~~~-~~~~~~~~~d~~~----~~~~~~-------~~  114 (363)
                      .+|||||++.||+++++.|+++|++|++++|+.++..+ +    ... .........+..+    .+.+.+       .+
T Consensus         3 vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAF   82 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHHh
Confidence            68999999999999999999999999999998764311 1    000 0000011122222    222322       23


Q ss_pred             cCCCEEEEccCCCCCCCCC--------------hhhHHHHHHHHHHHHHHHHHHHHhCC-------CCCCCeEEEeccce
Q 017977          115 QGSTAVVNLAGTPIGTRWS--------------SEIKKEIKESRIRVTSKVVDLINESP-------EGVRPSVLELVKPK  173 (363)
Q Consensus       115 ~~~d~Vi~~a~~~~~~~~~--------------~~~~~~~~~~n~~~~~~l~~~~~~~~-------~~~~~~v~~SS~~~  173 (363)
                      ..+|++||+||........              ......++..|..+............       .....++.+++..+
T Consensus        83 g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (266)
T d1mxha_          83 GRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMT  162 (266)
T ss_dssp             SCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGGG
T ss_pred             CCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhccc
Confidence            4689999999975432211              22334556667666665555554420       11122334444421


Q ss_pred             ecCCcccccccCCCcchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEeCCCCcccchHHHHHHHhCCC
Q 017977          174 YLMRAAHQEMITWLSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGP  253 (363)
Q Consensus       174 ~yg~~~~~e~~~~~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~  253 (363)
                             ....+....|..+|.+...++++       ....+.. .|+++..|.||.+..+.... .....  ...+..|
T Consensus       163 -------~~~~~~~~~Y~asKaal~~lt~~-------lA~e~~~-~gIrVN~I~PG~i~t~~~~~-~~~~~--~~~~~~p  224 (266)
T d1mxha_         163 -------DLPLPGFCVYTMAKHALGGLTRA-------AALELAP-RHIRVNAVAPGLSLLPPAMP-QETQE--EYRRKVP  224 (266)
T ss_dssp             -------GSCCTTCHHHHHHHHHHHHHHHH-------HHHHHGG-GTEEEEEEEESSBSCCSSSC-HHHHH--HHHTTCT
T ss_pred             -------cccCcchhhhhhhHHHHhhhHHH-------HHHHhCc-cCcEEEEeccCcEeccccCC-HHHHH--HHHhcCC
Confidence                   11123334566565444433321       1111222 38999999999987654322 11111  2222233


Q ss_pred             CCCCCCccccccHHHHHHHHHHHhcCCC--CCc-eEEeeCCCC
Q 017977          254 LGSGQQWFSWIHLDDIVNLIYEALSNPS--YRG-VINGTAPNP  293 (363)
Q Consensus       254 ~~~~~~~~~~i~v~D~a~a~~~~~~~~~--~~g-~~~i~~~~~  293 (363)
                      ++.     -+...+|+|++++.++....  ..| ++.+.+|-.
T Consensus       225 l~r-----~~~~peeva~~v~fL~s~~s~~itG~~i~vDGG~~  262 (266)
T d1mxha_         225 LGQ-----SEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLI  262 (266)
T ss_dssp             TTS-----CCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CCC-----CCCCHHHHHHHHHHHhCchhCCccCCeEEECccHh
Confidence            321     24679999999999997654  455 777777643

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.29  E-value=3.6e-11  Score=105.28  Aligned_cols=170  Identities=11%  Similarity=-0.008  Sum_probs=101.8

Q ss_pred             ccEEEEec--CcchHHHHHHHHHHhCCCEEEEEeCCCCccc-------------ccCCCCCc------------------
Q 017977           50 QMTVSVTG--ATGFIGRRLVQRLQADNHQVRVLTRSRSKAE-------------LIFPGKKT------------------   96 (363)
Q Consensus        50 ~~~vlVtG--atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-------------~~~~~~~~------------------   96 (363)
                      .+.+||||  ++..||+++++.|+++|.+|++..+......             ........                  
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND   81 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGGG
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhcc
Confidence            35789999  5579999999999999999999876543110             00000000                  


Q ss_pred             -----cccCcccccCcchHHhhc-------cCCCEEEEccCCCCC-----CCCChhhHHHHHHHHHHHHHHHHHHHHhCC
Q 017977           97 -----RFFPGVMIAEEPQWRDCI-------QGSTAVVNLAGTPIG-----TRWSSEIKKEIKESRIRVTSKVVDLINESP  159 (363)
Q Consensus        97 -----~~~~~~d~~~~~~~~~~~-------~~~d~Vi~~a~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~  159 (363)
                           .....+|+.+.++++.++       .++|++||+||....     ...+.+.....+++|+.+...+.+++.+.-
T Consensus        82 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m  161 (329)
T d1uh5a_          82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM  161 (329)
T ss_dssp             CCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred             cchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhc
Confidence                 000123455555555443       468999999986432     233556788899999999999999988752


Q ss_pred             CCCCCeEEEeccceecCCcccccccCC-CcchhhhhhhcccchhhHHHHHHHHHHHhccCCCceEEEEeeceEEe
Q 017977          160 EGVRPSVLELVKPKYLMRAAHQEMITW-LSDYCAKVYCLVSFNRGVLVCREWEGTALKVNKDVRLALIRIGIVLG  233 (363)
Q Consensus       160 ~~~~~~v~~SS~~~~yg~~~~~e~~~~-~~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~ilRp~~v~g  233 (363)
                      ....++|.+||.++..+       .|. ...|..+|.+...++++  +..+     +...+|+++..|.||.|-.
T Consensus       162 ~~~GsIv~iss~~~~~~-------~p~y~~~y~asKaal~~ltr~--lA~E-----la~~~gIRVNaI~PG~i~T  222 (329)
T d1uh5a_         162 KPQSSIISLTYHASQKV-------VPGYGGGMSSAKAALESDTRV--LAYH-----LGRNYNIRINTISAGPLKS  222 (329)
T ss_dssp             EEEEEEEEEECGGGTSC-------CTTCTTTHHHHHHHHHHHHHH--HHHH-----HHHHHCCEEEEEEECCCCC
T ss_pred             ccccccccceeehhccc-------ccccchhhhhhhccccccchh--hHHH-----HhcccCcEEEEEecCcccc
Confidence            22345888887743111       111 22344444333222221  1111     1111389999999998754

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.09  E-value=1e-11  Score=99.93  Aligned_cols=81  Identities=16%  Similarity=0.172  Sum_probs=64.4

Q ss_pred             CCCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCC---ccccCcccccCcchHHhhccCCCEEEEc
Q 017977           47 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKK---TRFFPGVMIAEEPQWRDCIQGSTAVVNL  123 (363)
Q Consensus        47 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~~~d~Vi~~  123 (363)
                      ....++|+||||+|.||+.+++.|+++|++|++++|+.++.+...+...   ......+|+.+.+++++.+.++|+|||+
T Consensus        20 ~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~iDilin~   99 (191)
T d1luaa1          20 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTA   99 (191)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEEC
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHhcCcCeeeec
Confidence            4456899999999999999999999999999999999866543321110   0113457888999999999999999999


Q ss_pred             cCCC
Q 017977          124 AGTP  127 (363)
Q Consensus       124 a~~~  127 (363)
                      |+..
T Consensus       100 Ag~g  103 (191)
T d1luaa1         100 GAIG  103 (191)
T ss_dssp             CCTT
T ss_pred             Cccc
Confidence            9863

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.71  E-value=2.5e-08  Score=75.22  Aligned_cols=114  Identities=16%  Similarity=0.168  Sum_probs=80.3

Q ss_pred             EEEEecCcchHHHHHHHHHHhCCC--EEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCCCCC
Q 017977           52 TVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIG  129 (363)
Q Consensus        52 ~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~~~~  129 (363)
                      ||.|+||+|.+|++++-.|..+|.  ++..++.+..+...+-..........-......+..+.++++|+||.+||.+..
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~Dl~~~~~~~~~~~~~~~~~~~~~~~~aDivVitag~~~~   81 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGVPRK   81 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEEEECCSCCCC
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhHHHhhhhhhcCCCeEEcCCChHHHhCCCCEEEECCCcCCC
Confidence            799999999999999999998884  799999876443221111110001112233566777889999999999997533


Q ss_pred             CCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEec
Q 017977          130 TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELV  170 (363)
Q Consensus       130 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS  170 (363)
                      .   .....+.++.|....+.+++.+.+  .+.+.++.+-|
T Consensus        82 ~---g~sR~~ll~~N~~i~~~i~~~i~~--~~p~~iiivvt  117 (144)
T d1mlda1          82 P---GMTRDDLFNTNATIVATLTAACAQ--HCPDAMICIIS  117 (144)
T ss_dssp             T---TCCGGGGHHHHHHHHHHHHHHHHH--HCTTSEEEECS
T ss_pred             C---CCCcchHHHHHHHHHHHHHHHHHh--cCCCeEEEEec
Confidence            2   223567889999999999999999  56565565554

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=98.53  E-value=5.8e-08  Score=73.35  Aligned_cols=114  Identities=13%  Similarity=0.224  Sum_probs=72.2

Q ss_pred             CCCccEEEEecCcchHHHHHHHHHHhCC--CEEEEEeCCCCcccc----cCCCCCccccCcccccCcchHHhhccCCCEE
Q 017977           47 KASQMTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAEL----IFPGKKTRFFPGVMIAEEPQWRDCIQGSTAV  120 (363)
Q Consensus        47 ~~~~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~----~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~V  120 (363)
                      +++.|||.|+|+ |++|..++..|+.+|  .+|..+++++.....    +.....   ...-......++ +.+.++|+|
T Consensus         2 m~~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~---~~~~~~~~~~d~-~~~~~adiv   76 (146)
T d1ez4a1           2 MPNHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQA---FTAPKKIYSGEY-SDCKDADLV   76 (146)
T ss_dssp             BTTBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGG---GSCCCEEEECCG-GGGTTCSEE
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhcccc---ccCCceEeeccH-HHhccccEE
Confidence            456789999995 999999999999987  699999998754221    100000   000001111123 346889999


Q ss_pred             EEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEec
Q 017977          121 VNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELV  170 (363)
Q Consensus       121 i~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS  170 (363)
                      |.+||.+..   ......+.+..|..-.+.+++.+.+  .+.+.++.+-|
T Consensus        77 vitag~~~~---~g~~r~~l~~~N~~i~~~~~~~i~~--~~p~aivivvt  121 (146)
T d1ez4a1          77 VITAGAPQK---PGESRLDLVNKNLNILSSIVKPVVD--SGFDGIFLVAA  121 (146)
T ss_dssp             EECCCC-------------CHHHHHHHHHHHHHHHHH--TTCCSEEEECS
T ss_pred             EEecccccC---CCCCHHHHHHHHHHHHHHHHHHHhh--cCCCcEEEEeC
Confidence            999987532   2334567788999999999999999  66666665554

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.45  E-value=2.7e-07  Score=69.44  Aligned_cols=111  Identities=19%  Similarity=0.224  Sum_probs=73.8

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCC--CEEEEEeCCCCcc--c----ccCCCCCccccCccccc-CcchHHhhccCCCEEE
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKA--E----LIFPGKKTRFFPGVMIA-EEPQWRDCIQGSTAVV  121 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~--~----~~~~~~~~~~~~~~d~~-~~~~~~~~~~~~d~Vi  121 (363)
                      |||.|+||+|.+|+.++-.|+.+|  .++..+++++...  +    .+..... ......++. ..+...+.++++|+||
T Consensus         1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~-~~~~~~~~~~~~~~d~~~l~~aDvVV   79 (145)
T d1hyea1           1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALA-GTRSDANIYVESDENLRIIDESDVVI   79 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHT-TSCCCCEEEEEETTCGGGGTTCSEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhccc-ccccCCccccCCcchHHHhccceEEE
Confidence            699999999999999999999988  4999999875321  1    1110000 001112221 1111234688999999


Q ss_pred             EccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEE
Q 017977          122 NLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVL  167 (363)
Q Consensus       122 ~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~  167 (363)
                      -+||.+..   ......+.++.|..-.+.+++.+.+  .+.+.++.
T Consensus        80 itAG~~~~---~g~sR~dl~~~Na~iv~~i~~~i~~--~~~~~iiv  120 (145)
T d1hyea1          80 ITSGVPRK---EGMSRMDLAKTNAKIVGKYAKKIAE--ICDTKIFV  120 (145)
T ss_dssp             ECCSCCCC---TTCCHHHHHHHHHHHHHHHHHHHHH--HCCCEEEE
T ss_pred             EecccccC---CCCChhhhhhhhHHHHHHHHHHHhc--cCCCeEEE
Confidence            99997533   2334678899999999999999988  44443433

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.41  E-value=2.8e-07  Score=69.27  Aligned_cols=110  Identities=15%  Similarity=0.112  Sum_probs=72.1

Q ss_pred             cEEEEecCcchHHHHHHHHHH-hCC--CEEEEEeCCCCccc---ccCCCCCccccCcccccCcchHHhhccCCCEEEEcc
Q 017977           51 MTVSVTGATGFIGRRLVQRLQ-ADN--HQVRVLTRSRSKAE---LIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA  124 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~-~~g--~~V~~~~r~~~~~~---~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a  124 (363)
                      |||.|+|++|.+|++++-.|. +.+  .++..++..+....   .+.....  ......+...+.+ +.++++|+||.+|
T Consensus         1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~~~g~a~Dl~h~~~--~~~~~~~~~~~~~-~~~~~aDvvvita   77 (145)
T d2cmda1           1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPT--AVKIKGFSGEDAT-PALEGADVVLISA   77 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTTHHHHHHHHHTSCS--SCEEEEECSSCCH-HHHTTCSEEEECC
T ss_pred             CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccccchhHHHHHHCCcc--ccCCcEEEcCCCc-cccCCCCEEEECC
Confidence            799999999999999998875 433  78999987542210   1111100  0111112233334 4688999999999


Q ss_pred             CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEE
Q 017977          125 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLE  168 (363)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~  168 (363)
                      |.+...   .....+.+..|..-.+.+.+.+.+  .+.+.++.+
T Consensus        78 G~~~k~---g~~R~dl~~~N~~i~~~v~~~i~~--~~p~aiviv  116 (145)
T d2cmda1          78 GVRRKP---GMDRSDLFNVNAGIVKNLVQQVAK--TCPKACIGI  116 (145)
T ss_dssp             SCCCCT---TCCGGGGHHHHHHHHHHHHHHHHH--HCTTSEEEE
T ss_pred             CccCCC---CcchhhHHHHHHHHHHHHHHHHHh--hCCCcEEEE
Confidence            975332   234567888999999999999998  454544443

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.35  E-value=3.9e-07  Score=67.77  Aligned_cols=73  Identities=14%  Similarity=0.248  Sum_probs=56.9

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhh-ccCCCEEEEccC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC-IQGSTAVVNLAG  125 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~d~Vi~~a~  125 (363)
                      |+|+|+|+ |.+|+.+++.|.+.|++|++++++++..+........ ....+|..+.+.+.++ ++++|+++-+..
T Consensus         1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~~~-~vi~Gd~~~~~~l~~~~i~~a~~vv~~t~   74 (132)
T d1lssa_           1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDA-LVINGDCTKIKTLEDAGIEDADMYIAVTG   74 (132)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSS-EEEESCTTSHHHHHHTTTTTCSEEEECCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhhhh-hhccCcccchhhhhhcChhhhhhhcccCC
Confidence            79999997 9999999999999999999999998766544322111 1334688888888776 578999997644

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.27  E-value=2.9e-06  Score=63.58  Aligned_cols=70  Identities=17%  Similarity=0.242  Sum_probs=44.2

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCC----CEEEEEeCCCCcccccCCCCCccccCcccccCcchH-HhhccCCCEEEEcc
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADN----HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW-RDCIQGSTAVVNLA  124 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~~~~d~Vi~~a  124 (363)
                      |++|.|+||||++|+.+++.|+++.    .+++.+.++..........       .-+....+.. ...++++|++|.++
T Consensus         1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~~-------~~~~~~~~~~~~~~~~~~DivF~a~   73 (146)
T d1t4ba1           1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFG-------GTTGTLQDAFDLEALKALDIIVTCQ   73 (146)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGG-------TCCCBCEETTCHHHHHTCSEEEECS
T ss_pred             CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecccccccccccc-------CCceeeecccchhhhhcCcEEEEec
Confidence            5799999999999999999988763    3677776655443322111       1111111111 12467899999888


Q ss_pred             CC
Q 017977          125 GT  126 (363)
Q Consensus       125 ~~  126 (363)
                      +.
T Consensus        74 ~~   75 (146)
T d1t4ba1          74 GG   75 (146)
T ss_dssp             CH
T ss_pred             Cc
Confidence            53

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=98.25  E-value=2.4e-06  Score=63.89  Aligned_cols=109  Identities=17%  Similarity=0.209  Sum_probs=69.8

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCC--EEEEEeCCCCcccc----cCCCCCccccCcccccCcchHHhhccCCCEEEEcc
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAEL----IFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA  124 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~----~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a  124 (363)
                      +||.|+|+ |.+|..++-.|+.++.  ++..+++++.....    +.....  ......+.. . -.+.++++|+|+-+|
T Consensus         2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~--~~~~~~~~~-~-~~~~~~~adivvita   76 (142)
T d1y6ja1           2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLP--FMGQMSLYA-G-DYSDVKDCDVIVVTA   76 (142)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCC--CTTCEEEC----CGGGGTTCSEEEECC
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcc--cCCCeeEee-C-cHHHhCCCceEEEec
Confidence            48999997 9999999999999874  89999988865321    111111  011111211 1 234578899999999


Q ss_pred             CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEe
Q 017977          125 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLEL  169 (363)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~S  169 (363)
                      |.+..   ......+.+..|..-.+.+++.+.+  .+.+.++.+-
T Consensus        77 g~~~~---~~~~r~~l~~~N~~i~~~i~~~i~~--~~p~ai~ivv  116 (142)
T d1y6ja1          77 GANRK---PGETRLDLAKKNVMIAKEVTQNIMK--YYNHGVILVV  116 (142)
T ss_dssp             CC---------CHHHHHHHHHHHHHHHHHHHHH--HCCSCEEEEC
T ss_pred             ccccC---cCcchhHHhhHHHHHHHHHHHHhhc--cCCCceEEEe
Confidence            87522   2344678889999999999999998  5555544443

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=98.24  E-value=3.1e-06  Score=63.43  Aligned_cols=112  Identities=16%  Similarity=0.184  Sum_probs=75.3

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCC--CEEEEEeCCCCcccccCCC---CCccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPG---KKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      |||.|+|| |.+|+.++..|+..|  .++..+++++.........   ..........+...+. .+.++++|+|+-+||
T Consensus         1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~~~-~~~~~dadvvvitag   78 (142)
T d1guza1           1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSND-YADTANSDIVIITAG   78 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESC-GGGGTTCSEEEECCS
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEecCC-HHHhcCCeEEEEEEe
Confidence            69999996 999999999999987  5999999988653321100   0000011122222222 346789999999999


Q ss_pred             CCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEe
Q 017977          126 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLEL  169 (363)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~S  169 (363)
                      .+..   ......+.+..|..-.+.+++.+.+  ...+.++.+-
T Consensus        79 ~~~~---~g~~r~~l~~~N~~i~~~i~~~i~~--~~p~aivivv  117 (142)
T d1guza1          79 LPRK---PGMTREDLLMKNAGIVKEVTDNIMK--HSKNPIIIVV  117 (142)
T ss_dssp             CCCC---TTCCHHHHHHHHHHHHHHHHHHHHH--HCSSCEEEEC
T ss_pred             cCCC---CCCchHHHHHHHHHHHHHHHHHhhc--cCCCeEEEEe
Confidence            7533   2233567888999999999999998  4555555543

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=98.22  E-value=6.2e-07  Score=68.45  Aligned_cols=104  Identities=15%  Similarity=0.190  Sum_probs=66.8

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCC-------EEEEEeCCC--CcccccC---CCCCccccCcccccCcchHHhhccC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNH-------QVRVLTRSR--SKAELIF---PGKKTRFFPGVMIAEEPQWRDCIQG  116 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~--~~~~~~~---~~~~~~~~~~~d~~~~~~~~~~~~~  116 (363)
                      .+|||.|+||+|++|++++-.|+..+.       ....+.-..  .......   ....  ....-.+...+...+.+++
T Consensus         3 ~p~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~   80 (154)
T d1y7ta1           3 APVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCA--FPLLAGLEATDDPKVAFKD   80 (154)
T ss_dssp             CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTT--CTTEEEEEEESCHHHHTTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccc--cccccccccCCchhhhccc
Confidence            457999999999999999999998652       122222211  1111100   0000  0001122234455678999


Q ss_pred             CCEEEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHh
Q 017977          117 STAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINE  157 (363)
Q Consensus       117 ~d~Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  157 (363)
                      +|+||-++|.+..   ......+.+..|..-.+.+.+.+.+
T Consensus        81 advViitaG~~~~---pg~~r~dl~~~N~~i~~~~~~~i~k  118 (154)
T d1y7ta1          81 ADYALLVGAAPRK---AGMERRDLLQVNGKIFTEQGRALAE  118 (154)
T ss_dssp             CSEEEECCCCCCC---TTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccEEEeecCcCCC---CCCcHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999997532   3334678889999999999999998

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.21  E-value=5.4e-07  Score=70.75  Aligned_cols=74  Identities=18%  Similarity=0.240  Sum_probs=54.7

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      ++|+|+|| |++|+++++.|.++||+|++++|+..+...+............+..+.......+...|.++.+..
T Consensus         3 K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~   76 (182)
T d1e5qa1           3 KSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIP   76 (182)
T ss_dssp             CEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECSC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcccccccccccccchhhhHhhhhccceeEeecc
Confidence            68999996 999999999999999999999999988777655432111122233344566667778888886553

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=98.15  E-value=1.3e-06  Score=65.30  Aligned_cols=112  Identities=18%  Similarity=0.240  Sum_probs=73.8

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCC--CEEEEEeCCCCcccccCCCCC--ccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPGKK--TRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      |||.|+|+ |.+|..++-.|+.++  .++..+++++...........  ........+. .+++ +.++++|+||-+||.
T Consensus         1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~-~~~~-~~~~~adivvitag~   77 (140)
T d1a5za1           1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIY-AGDY-ADLKGSDVVIVAAGV   77 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEE-ECCG-GGGTTCSEEEECCCC
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhcccccccccccccccc-CCcH-HHhcCCCEEEEeccc
Confidence            69999996 999999999998876  589999988654321100000  0001111121 1223 457899999999997


Q ss_pred             CCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEec
Q 017977          127 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELV  170 (363)
Q Consensus       127 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS  170 (363)
                      +...   .....+.+..|..-.+.+++.+.+  .+.+.++++-|
T Consensus        78 ~~~~---g~~r~dl~~~N~~I~~~i~~~i~~--~~p~aivivvt  116 (140)
T d1a5za1          78 PQKP---GETRLQLLGRNARVMKEIARNVSK--YAPDSIVIVVT  116 (140)
T ss_dssp             CCCS---SCCHHHHHHHHHHHHHHHHHHHHH--HCTTCEEEECS
T ss_pred             ccCC---CcchhhhhccccchHHHHHHHHHh--cCCCcEEEEeC
Confidence            5332   233567788899999999999999  55555665543

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=98.15  E-value=7.8e-06  Score=63.26  Aligned_cols=103  Identities=14%  Similarity=0.186  Sum_probs=69.4

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCC---C----EEEEEeCCCCcc--cccC---CCCCccccCc-ccccCcchHHhhccC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADN---H----QVRVLTRSRSKA--ELIF---PGKKTRFFPG-VMIAEEPQWRDCIQG  116 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g---~----~V~~~~r~~~~~--~~~~---~~~~~~~~~~-~d~~~~~~~~~~~~~  116 (363)
                      ..||.|+||+|.||++++-.|++.+   .    .++.++......  ..+.   ....   +.. -...-.....+.+++
T Consensus        24 ~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a---~~~~~~~~~~~~~~~~~~~  100 (175)
T d7mdha1          24 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSL---YPLLREVSIGIDPYEVFED  100 (175)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTT---CTTEEEEEEESCHHHHTTT
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccc---cccccCccccccchhhccC
Confidence            3589999999999999999998742   1    555556544321  1100   0000   110 122233456678899


Q ss_pred             CCEEEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhC
Q 017977          117 STAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES  158 (363)
Q Consensus       117 ~d~Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  158 (363)
                      +|+||-.+|.+.   .......+.+..|..-.+.+.+++.+.
T Consensus       101 aDvVvi~ag~~r---kpg~tR~Dll~~N~~I~k~~~~~i~~~  139 (175)
T d7mdha1         101 VDWALLIGAKPR---GPGMERAALLDINGQIFADQGKALNAV  139 (175)
T ss_dssp             CSEEEECCCCCC---CTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CceEEEeeccCC---CCCCcHHHHHHHHHHHHHHHHHHHHhh
Confidence            999999998753   334456789999999999999999984

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=98.14  E-value=5.1e-06  Score=63.02  Aligned_cols=120  Identities=12%  Similarity=0.111  Sum_probs=77.8

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCC-EEEEEeCCCCcccccCCCCCc-c--ccCcccccCcchHHhhccCCCEEEEc
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKT-R--FFPGVMIAEEPQWRDCIQGSTAVVNL  123 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~-~--~~~~~d~~~~~~~~~~~~~~d~Vi~~  123 (363)
                      .+++||.|+|+ |.+|+.++-.|...+. ++.+++.++............ .  .............++.++++|+|+-+
T Consensus         5 ~k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~~~~~~~adiVvit   83 (154)
T d1pzga1           5 QRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADCVIVT   83 (154)
T ss_dssp             SCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSEEEEC
T ss_pred             cCCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEeccCchhhhhcCCCeEEEe
Confidence            34569999997 9999999988887774 899999887653221100000 0  00011222334566788999999999


Q ss_pred             cCCCCCCCC-C-hhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEec
Q 017977          124 AGTPIGTRW-S-SEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELV  170 (363)
Q Consensus       124 a~~~~~~~~-~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS  170 (363)
                      ++.+..... . .....+.+..|..-.+.+++.+.+  .+.+.++.+-|
T Consensus        84 ag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~--~~p~aiviivs  130 (154)
T d1pzga1          84 AGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKK--YCPKTFIIVVT  130 (154)
T ss_dssp             CSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHH--HCTTCEEEECC
T ss_pred             cccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHh--cCCCcEEEEeC
Confidence            987533211 1 113456788899999999999998  56565665544

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.11  E-value=4.9e-06  Score=62.14  Aligned_cols=113  Identities=13%  Similarity=0.136  Sum_probs=74.9

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCC--CEEEEEeCCCCcccccCCCCCc--c-ccCcccccCcchHHhhccCCCEEEEccC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPGKKT--R-FFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~--~-~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      |||.|+|+ |.+|.+++-.|+.+|  .++..++++++...........  . ......+....++ +.++++|+||-.|+
T Consensus         1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~-~~~~~adiVvitag   78 (142)
T d1ojua1           1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADY-SLLKGSEIIVVTAG   78 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCG-GGGTTCSEEEECCC
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCH-HHhccccEEEEecc
Confidence            79999996 999999999998877  4899999877553211000000  0 0001122222333 47889999999998


Q ss_pred             CCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEec
Q 017977          126 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELV  170 (363)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS  170 (363)
                      .+..   ......+.+..|..-.+.+.+.+.+  .+.+.++++-|
T Consensus        79 ~~~~---~g~~r~~l~~~n~~i~~~i~~~i~~--~~p~aivivvt  118 (142)
T d1ojua1          79 LARK---PGMTRLDLAHKNAGIIKDIAKKIVE--NAPESKILVVT  118 (142)
T ss_dssp             CCCC---SSCCHHHHHHHHHHHHHHHHHHHHT--TSTTCEEEECS
T ss_pred             ccCC---CCCchHHHHHHhhHHHHHHHHHHHh--hCCCcEEEEec
Confidence            7533   2334677888999999999999999  55555555443

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=98.11  E-value=5.1e-06  Score=62.58  Aligned_cols=111  Identities=23%  Similarity=0.255  Sum_probs=72.5

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCC--EEEEEeCCCCcccc----cCCCCCccccCcccccCcchHHhhccCCCEEEE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAEL----IFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVN  122 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~----~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~  122 (363)
                      ...||.|+|| |++|.+++-.|+..|.  ++..++++++....    +..... .......+.. .++ +.+.++|+||.
T Consensus         5 ~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~-~~~~~~~~~~-~d~-~~l~daDvvvi   80 (148)
T d1ldna1           5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKV-FAPKPVDIWH-GDY-DDCRDADLVVI   80 (148)
T ss_dssp             TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTT-SSSSCCEEEE-CCG-GGTTTCSEEEE
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCcc-ccCCCeEEEE-CCH-HHhccceeEEE
Confidence            3469999996 9999999999998774  89999987755221    100000 0011112211 122 55788999999


Q ss_pred             ccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEE
Q 017977          123 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLE  168 (363)
Q Consensus       123 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~  168 (363)
                      +++.+...   .....+.+..|..-.+.+.+.+.+  .+.+.++.+
T Consensus        81 tag~~~~~---~~~R~dl~~~N~~i~~~i~~~i~~--~~p~a~~iv  121 (148)
T d1ldna1          81 CAGANQKP---GETRLDLVDKNIAIFRSIVESVMA--SGFQGLFLV  121 (148)
T ss_dssp             CCSCCCCT---TTCSGGGHHHHHHHHHHHHHHHHH--HTCCSEEEE
T ss_pred             eccccccc---CcchhHHHHHHHHHHHHHHHHHHh--hCCCceEEE
Confidence            99975332   233456778899999999999988  454544444

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=98.08  E-value=2e-05  Score=58.74  Aligned_cols=68  Identities=19%  Similarity=0.191  Sum_probs=41.2

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCC----CEEEEEeCCCCcccccCCCCCccccCcccccCcc-hHHhhccCCCEEEEccC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADN----HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEP-QWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~~~~d~Vi~~a~  125 (363)
                      |||.|+||||++|+.|++.|+++.    .++..++.+........       +..-+....+ .-...++++|+||.+..
T Consensus         1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk~~~-------~~~~~~~~~~~~~~~~~~~~DvvF~alp   73 (147)
T d1mb4a1           1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPAPN-------FGKDAGMLHDAFDIESLKQLDAVITCQG   73 (147)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSBCCC-------SSSCCCBCEETTCHHHHTTCSEEEECSC
T ss_pred             CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccccccccccc-------cCCcceeeecccchhhhccccEEEEecC
Confidence            689999999999999999988753    36665554433222211       1111111111 11234678999998875

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.03  E-value=8.1e-06  Score=61.12  Aligned_cols=69  Identities=19%  Similarity=0.158  Sum_probs=43.8

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCC---EEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNH---QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      +|+|.|.||||++|+.|++.|.+++|   ++..+..+.+........       .-++.-.+.-...+.++|++|.+++
T Consensus         2 ~mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~Gk~i~~~-------~~~~~~~~~~~~~~~~~d~vf~a~p   73 (144)
T d2hjsa1           2 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGFA-------ESSLRVGDVDSFDFSSVGLAFFAAA   73 (144)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEEET-------TEEEECEEGGGCCGGGCSEEEECSC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCCcceeec-------cccchhccchhhhhccceEEEecCC
Confidence            47999999999999999999987654   677666554443332211       1122212212233567899997765

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=98.02  E-value=9.5e-06  Score=60.53  Aligned_cols=110  Identities=15%  Similarity=0.243  Sum_probs=74.8

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCC--EEEEEeCCCCcccc----cCCCCCccccCcccccCcchHHhhccCCCEEEEcc
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAEL----IFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA  124 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~----~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a  124 (363)
                      .||.|+|+ |.+|.+++-.|+.+|.  ++..+++++.....    +.....  ......+...+++ +.++++|+||-+|
T Consensus         2 ~Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~--~~~~~~i~~~~~~-~~~~daDvVVita   77 (143)
T d1llda1           2 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSS--FYPTVSIDGSDDP-EICRDADMVVITA   77 (143)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGG--GSTTCEEEEESCG-GGGTTCSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccc--cCCCceeecCCCH-HHhhCCcEEEEec
Confidence            48999996 9999999999999884  89999988754321    111000  0111222223344 3578899999999


Q ss_pred             CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEe
Q 017977          125 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLEL  169 (363)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~S  169 (363)
                      |.+..   ......+.+..|..-.+.+...+.+  .+.+.++.+-
T Consensus        78 G~~~~---~g~~R~dl~~~N~~i~~~i~~~i~~--~~p~ai~ivv  117 (143)
T d1llda1          78 GPRQK---PGQSRLELVGATVNILKAIMPNLVK--VAPNAIYMLI  117 (143)
T ss_dssp             CCCCC---TTCCHHHHHHHHHHHHHHHHHHHHH--HCTTSEEEEC
T ss_pred             ccccC---CCCchhhhhhhhHHHHHHHHHHHHh--hCCCeEEEEe
Confidence            97533   2334567889999999999999998  5555555443

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.01  E-value=1e-05  Score=64.59  Aligned_cols=77  Identities=27%  Similarity=0.404  Sum_probs=53.9

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCc-----------ccccCcchHHhhccCCCE
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPG-----------VMIAEEPQWRDCIQGSTA  119 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-----------~d~~~~~~~~~~~~~~d~  119 (363)
                      |||.|+| .|++|..++..|++.||+|++++.+....+.+...........           ..+.-..++.++++++|+
T Consensus         1 MkI~ViG-lG~vGl~~a~~la~~g~~V~g~D~n~~~i~~ln~g~~p~~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~d~   79 (202)
T d1mv8a2           1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDV   79 (202)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCSE
T ss_pred             CEEEEEC-CCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHhcccCCcccchhhhhhhhhhhcccccccCCCHHHHHhhCCE
Confidence            7899998 6999999999999999999999998766544432211000000           111233456677888999


Q ss_pred             EEEccCCCC
Q 017977          120 VVNLAGTPI  128 (363)
Q Consensus       120 Vi~~a~~~~  128 (363)
                      ++-|.+.+.
T Consensus        80 i~i~VpTP~   88 (202)
T d1mv8a2          80 SFICVGTPS   88 (202)
T ss_dssp             EEECCCCCB
T ss_pred             EEEecCccc
Confidence            999988653

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=97.99  E-value=6.7e-06  Score=61.20  Aligned_cols=108  Identities=17%  Similarity=0.207  Sum_probs=71.2

Q ss_pred             EEEEecCcchHHHHHHHHHHhCCC--EEEEEeCCCCc--cc----ccCCCCCccccCcccccCcchHHhhccCCCEEEEc
Q 017977           52 TVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSK--AE----LIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNL  123 (363)
Q Consensus        52 ~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~--~~----~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~  123 (363)
                      ||.|+||+|.+|+.++-.|+.++.  ++..++....+  ..    .+.....  ......+.. .++ +.+.++|+|+-+
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~--~~~~~~i~~-~~~-~~~~~aDiVvit   77 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIA--YDSNTRVRQ-GGY-EDTAGSDVVVIT   77 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHT--TTCCCEEEE-CCG-GGGTTCSEEEEC
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhccc--ccCCceEee-CCH-HHhhhcCEEEEe
Confidence            799999999999999999999884  78888864322  11    1110000  000111111 122 346799999999


Q ss_pred             cCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEE
Q 017977          124 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLE  168 (363)
Q Consensus       124 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~  168 (363)
                      ||.+..   ..+...+.++.|..-.+.+.+.+.+  .+.+.++.+
T Consensus        78 aG~~~~---~g~~R~dl~~~N~~I~~~i~~~i~~--~~p~~i~iv  117 (142)
T d1o6za1          78 AGIPRQ---PGQTRIDLAGDNAPIMEDIQSSLDE--HNDDYISLT  117 (142)
T ss_dssp             CCCCCC---TTCCHHHHHHHHHHHHHHHHHHHHT--TCSCCEEEE
T ss_pred             cccccc---cCCchhhHHHHHHHHHHHHHHHHHh--cCCCceEEE
Confidence            997532   2334678999999999999999999  554544443

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=97.98  E-value=1.5e-05  Score=61.27  Aligned_cols=72  Identities=15%  Similarity=0.074  Sum_probs=49.3

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      |||+|+|+ |.+|..++..|.+.||+|.+++|++............  .......-.....+.+.++|+||.+.-
T Consensus         1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~D~iii~vk   72 (167)
T d1ks9a2           1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETD--GSIFNESLTANDPDFLATSDLLLVTLK   72 (167)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTT--SCEEEEEEEESCHHHHHTCSEEEECSC
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHhhhhccccCC--ccccccccccchhhhhcccceEEEeec
Confidence            79999997 9999999999999999999999998765543221110  011111111223345678999997764

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.96  E-value=1.9e-06  Score=68.76  Aligned_cols=40  Identities=38%  Similarity=0.514  Sum_probs=36.2

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCccccc
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI   90 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~   90 (363)
                      |||.|+||+|.+|++|++.|++.||+|.+.+|++++.+.+
T Consensus         1 Mki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l   40 (212)
T d1jaya_           1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAK   40 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence            7899999999999999999999999999999998765544

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.95  E-value=4.5e-06  Score=63.47  Aligned_cols=103  Identities=11%  Similarity=0.097  Sum_probs=65.8

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCC-----C--EEEEEeCCCCccc--ccC---CCCCccccCcccccCcchHHhhccCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADN-----H--QVRVLTRSRSKAE--LIF---PGKKTRFFPGVMIAEEPQWRDCIQGS  117 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g-----~--~V~~~~r~~~~~~--~~~---~~~~~~~~~~~d~~~~~~~~~~~~~~  117 (363)
                      +|||.|+||+|.+|++++-.|++.+     .  +++.++.+.....  .+.   ....  ......+.-.+...+.++++
T Consensus         3 p~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~   80 (154)
T d5mdha1           3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCA--LPLLKDVIATDKEEIAFKDL   80 (154)
T ss_dssp             CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTC--CTTEEEEEEESCHHHHTTTC
T ss_pred             ceEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccc--cccccccccCcccccccCCc
Confidence            4799999999999999999998653     1  4555554433211  110   0000  00111122233456788999


Q ss_pred             CEEEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHh
Q 017977          118 TAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINE  157 (363)
Q Consensus       118 d~Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  157 (363)
                      |+||-++|.+...   .....+.++.|..-.+.+.+.+.+
T Consensus        81 dvVVitag~~~~~---g~sr~dll~~N~~i~k~~~~~i~k  117 (154)
T d5mdha1          81 DVAILVGSMPRRD---GMERKDLLKANVKIFKCQGAALDK  117 (154)
T ss_dssp             SEEEECCSCCCCT---TCCTTTTHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEecccCCCC---CCchhHHHHHhHHHHHHHHHHHHh
Confidence            9999999976432   223456788999999999999877

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=97.93  E-value=1.8e-05  Score=60.01  Aligned_cols=111  Identities=14%  Similarity=0.198  Sum_probs=73.4

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCC--EEEEEeCCCCcccc----cCCCCCccccCcccccCcchHHhhccCCCEEEEc
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAEL----IFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNL  123 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~----~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~  123 (363)
                      ..||.|+|+ |.+|..++-.|+.+|.  ++..++++++....    +.....  ...........++ +.+.++|+||..
T Consensus        20 ~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~--~~~~~~~~~~~d~-~~~~~adiVVit   95 (160)
T d1i0za1          20 NNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSL--FLQTPKIVADKDY-SVTANSKIVVVT   95 (160)
T ss_dssp             SSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGG--GCCCSEEEECSSG-GGGTTCSEEEEC
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhcccc--ccCCCeEEeccch-hhcccccEEEEe
Confidence            359999996 9999999999999985  89999987654321    111000  0001111122223 457889999999


Q ss_pred             cCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEe
Q 017977          124 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLEL  169 (363)
Q Consensus       124 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~S  169 (363)
                      ||.+...   .....+.++.|..-.+.++..+.+  .+.+.++.+-
T Consensus        96 Ag~~~~~---g~tR~~l~~~N~~i~~~i~~~i~~--~~p~aiiivv  136 (160)
T d1i0za1          96 AGVRQQE---GESRLNLVQRNVNVFKFIIPQIVK--YSPDCIIIVV  136 (160)
T ss_dssp             CSCCCCT---TCCGGGGHHHHHHHHHHHHHHHHH--HCTTCEEEEC
T ss_pred             cCCcccc---CcchHHHHHHHHHHHHHHHHHHHh--cCCCcEEEEe
Confidence            9975332   233457788899999999999998  5555444433

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=97.92  E-value=2.4e-05  Score=58.34  Aligned_cols=112  Identities=13%  Similarity=0.158  Sum_probs=68.8

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCC-CEEEEEeCCCCcccccCCCC---CccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGK---KTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      +||.|+|+ |.+|..++-.|+..+ .++..++.+++.........   .........+....++. .+.++|+||-+||.
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~~-~~~~advvvitag~   79 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNYA-DTANSDVIVVTSGA   79 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGG-GGTTCSEEEECCSC
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcHH-HhcCCCEEEEeeec
Confidence            58999996 999999999988777 48999998776532211000   00000011122222333 46789999999997


Q ss_pred             CCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEe
Q 017977          127 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLEL  169 (363)
Q Consensus       127 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~S  169 (363)
                      +..   ......+.+..|..-.+.+++.+.+  .+.+.++.+-
T Consensus        80 ~~~---~~~~r~dl~~~N~~i~~~i~~~i~k--~~p~aivivv  117 (142)
T d1uxja1          80 PRK---PGMSREDLIKVNADITRACISQAAP--LSPNAVIIMV  117 (142)
T ss_dssp             C------------CHHHHHHHHHHHHHHHGG--GCTTCEEEEC
T ss_pred             cCC---cCcchhHHHhHHHHHHHHHHHHHhc--cCCCceEEEe
Confidence            532   2333457778899999999999998  5555555554

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.92  E-value=8.6e-06  Score=62.73  Aligned_cols=65  Identities=23%  Similarity=0.252  Sum_probs=46.5

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEcc
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA  124 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a  124 (363)
                      |||.|+| .|.+|..+++.|.+.||+|++++|++...+...+...      .|.  .....+.++++|+||-+.
T Consensus         1 MkI~iIG-~G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~------~~~--~~~~~~~~~~~DiIilav   65 (165)
T d2f1ka2           1 MKIGVVG-LGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQL------VDE--AGQDLSLLQTAKIIFLCT   65 (165)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTS------CSE--EESCGGGGTTCSEEEECS
T ss_pred             CEEEEEe-ecHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhc------cce--eeeecccccccccccccC
Confidence            6899998 5999999999999999999999998765544332211      111  111224678899998544

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.87  E-value=2.1e-05  Score=58.17  Aligned_cols=72  Identities=19%  Similarity=0.171  Sum_probs=56.9

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhh-ccCCCEEEEccC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC-IQGSTAVVNLAG  125 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~d~Vi~~a~  125 (363)
                      |+++|+|+ |.+|+++++.|.+.|++|++++.++...+.+......  ...+|..+++.+.++ ++++|.||-+.+
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~~~~~--~~~gd~~~~~~l~~a~i~~a~~vi~~~~   73 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATH--AVIANATEENELLSLGIRNFEYVIVAIG   73 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTTTCSE--EEECCTTCTTHHHHHTGGGCSEEEECCC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHHhCCc--ceeeecccchhhhccCCccccEEEEEcC
Confidence            46889985 9999999999999999999999998887666544321  223588888888776 788999886654

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.81  E-value=1e-05  Score=62.64  Aligned_cols=75  Identities=23%  Similarity=0.190  Sum_probs=52.6

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      +..+|+|+||+|-+|...++.+...|.+|+++++++++.+..+..+.   ...+|..+.........++|+||.+.|.
T Consensus        27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~~lGa---~~~i~~~~~~~~~~~~~g~D~v~d~~G~  101 (171)
T d1iz0a2          27 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGA---EEAATYAEVPERAKAWGGLDLVLEVRGK  101 (171)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTC---SEEEEGGGHHHHHHHTTSEEEEEECSCT
T ss_pred             CCCEEEEEeccccchhhhhhhhccccccccccccccccccccccccc---ceeeehhhhhhhhhccccccccccccch
Confidence            34689999999999999999999999999999998776655443321   1112333322222334579999998763

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=97.81  E-value=2.8e-05  Score=55.06  Aligned_cols=72  Identities=13%  Similarity=0.190  Sum_probs=54.9

Q ss_pred             CCCCCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc--CCCEEE
Q 017977           45 TQKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVV  121 (363)
Q Consensus        45 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~Vi  121 (363)
                      +..+...||.|+| .|.+|+-++....+.|++|++++.++..........    +...++.|.+.+.++..  ++|+|.
T Consensus         6 ~~~~~~~kigIlG-gGQL~rMla~aA~~lG~~v~v~d~~~~~PA~~va~~----~i~~~~~d~~~l~~~~~~~~~DviT   79 (111)
T d1kjqa2           6 ALRPAATRVMLLG-SGELGKEVAIECQRLGVEVIAVDRYADAPAMHVAHR----SHVINMLDGDALRRVVELEKPHYIV   79 (111)
T ss_dssp             TTSTTCCEEEEES-CSHHHHHHHHHHHTTTCEEEEEESSTTCGGGGGSSE----EEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CCCCCCCEEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCCCCCchhhcCCe----EEECCCCCHHHHHHHHHhhCCceEE
Confidence            3344556999999 599999999999999999999998876544332221    44568889988888764  579886

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.81  E-value=7.4e-06  Score=62.51  Aligned_cols=73  Identities=25%  Similarity=0.261  Sum_probs=58.3

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCC-EEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      .+.++|||+|+ |-+|+.+++.|.+.|. +|+++.|+..+...+...      .+....+.+++.+.+.++|+||.+.+.
T Consensus        22 l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~------~~~~~~~~~~~~~~l~~~Divi~atss   94 (159)
T d1gpja2          22 LHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARD------LGGEAVRFDELVDHLARSDVVVSATAA   94 (159)
T ss_dssp             CTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHH------HTCEECCGGGHHHHHHTCSEEEECCSS
T ss_pred             cccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHh------hhcccccchhHHHHhccCCEEEEecCC
Confidence            45579999997 9999999999999997 799999987776554332      124556677888899999999999886


Q ss_pred             C
Q 017977          127 P  127 (363)
Q Consensus       127 ~  127 (363)
                      +
T Consensus        95 ~   95 (159)
T d1gpja2          95 P   95 (159)
T ss_dssp             S
T ss_pred             C
Confidence            4

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.77  E-value=5.6e-05  Score=56.70  Aligned_cols=118  Identities=11%  Similarity=0.109  Sum_probs=74.0

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCC-CEEEEEeCCCCcccccCCCCCcc-ccCccccc-CcchHHhhccCCCEEEEccCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTR-FFPGVMIA-EEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~-~~~~~d~~-~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      ++||.|+|+ |.+|.+++..|...+ .++..+++++............. .+...+.. ......+.++++|+|+-+++.
T Consensus         3 ~~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~~~~~~~~advvvitag~   81 (150)
T d1t2da1           3 KAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTYDDLAGADVVIVTAGF   81 (150)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCGGGGTTCSEEEECCSC
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecccccccCCCcEEEEeccc
Confidence            359999995 999999998777776 48999998876533221100000 00011111 112233557889999999997


Q ss_pred             CCCCCCC--hhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEec
Q 017977          127 PIGTRWS--SEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELV  170 (363)
Q Consensus       127 ~~~~~~~--~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS  170 (363)
                      +......  .....+.+..|..-.+.+++.+.+  .+.+.++++-|
T Consensus        82 ~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~--~~p~aivivvt  125 (150)
T d1t2da1          82 TKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKK--NCPNAFIIVVT  125 (150)
T ss_dssp             SSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHH--HCTTSEEEECS
T ss_pred             ccCCCCCccccchhHHHHHHHHHHHHHHHHHHh--cCCCeEEEEec
Confidence            5332211  123456788999999999999998  55555555543

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.77  E-value=8.6e-06  Score=63.87  Aligned_cols=75  Identities=16%  Similarity=0.081  Sum_probs=54.8

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhc-----cCCCEEEEc
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI-----QGSTAVVNL  123 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-----~~~d~Vi~~  123 (363)
                      ++.+|||+||+|.+|+..++.....|.+|+++++++++.+.......   ...+|..+.+..+..+     .++|+||++
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~Ga---~~vi~~~~~~~~~~~~~~~~~~Gvd~v~D~  105 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGF---DAAFNYKTVNSLEEALKKASPDGYDCYFDN  105 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTC---SEEEETTSCSCHHHHHHHHCTTCEEEEEES
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHHhhhh---hhhcccccccHHHHHHHHhhcCCCceeEEe
Confidence            34689999999999999999999999999999998876655544332   1123444444333332     369999999


Q ss_pred             cCC
Q 017977          124 AGT  126 (363)
Q Consensus       124 a~~  126 (363)
                      .|.
T Consensus       106 vG~  108 (182)
T d1v3va2         106 VGG  108 (182)
T ss_dssp             SCH
T ss_pred             cCc
Confidence            874

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.75  E-value=1.9e-05  Score=61.55  Aligned_cols=32  Identities=25%  Similarity=0.507  Sum_probs=27.7

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhC-CCEEEEEe
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQAD-NHQVRVLT   81 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~   81 (363)
                      ||||.|.||||++|+.|++.|.++ .++|..+.
T Consensus         1 MikVaIiGATGyvG~eLlrlL~~HP~~ei~~l~   33 (179)
T d2g17a1           1 MLNTLIVGASGYAGAELVSYVNRHPHMTITALT   33 (179)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEE
T ss_pred             CcEEEEECcccHHHHHHHHHHHhCCCCceEeeE
Confidence            689999999999999999999997 45776554

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=97.72  E-value=2.4e-05  Score=60.35  Aligned_cols=75  Identities=13%  Similarity=0.177  Sum_probs=44.9

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCC-CEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      |+||.|.||||++|+.|++.|.++. .++..+..+......+...... .....++ ...+.+...+++|+||.+...
T Consensus         1 MikVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~~~aG~~i~~~~p~-~~~~~~~-~~~~~~~~~~~~dvvf~a~p~   76 (176)
T d1vkna1           1 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPS-TLENSIL-SEFDPEKVSKNCDVLFTALPA   76 (176)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGG-GCCCCBC-BCCCHHHHHHHCSEEEECCST
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhCCCceEEEeeccccCCCcccccCch-hhccccc-cccCHhHhccccceEEEcccc
Confidence            6899999999999999999999865 4777665444332222110000 0011111 222333445679999977754

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=97.72  E-value=5.3e-05  Score=57.64  Aligned_cols=98  Identities=15%  Similarity=0.096  Sum_probs=58.2

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhC-CCEEEEEe-CCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQAD-NHQVRVLT-RSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  127 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~~  127 (363)
                      .+||+|.|++|.+|+.|++.+.+. +.++.+.. |...+... ............++.-.+++...++.+|+||.+... 
T Consensus         4 ~ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g-~d~~~~~~~~~~~~~~~~~~~~~~~~~DViIDFs~p-   81 (162)
T d1diha1           4 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLG-SDAGELAGAGKTGVTVQSSLDAVKDDFDVFIDFTRP-   81 (162)
T ss_dssp             BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCS-CCTTCSSSSSCCSCCEESCSTTTTTSCSEEEECSCH-
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhcc-chhhhhhccccCCceeeccHHHHhcccceEEEeccH-
Confidence            479999999999999999999875 56765553 43322110 000000001112222334456677889999987542 


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEecc
Q 017977          128 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVK  171 (363)
Q Consensus       128 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~  171 (363)
                                        .++...++.|.+  .++. +| +.|+
T Consensus        82 ------------------~~~~~~~~~a~~--~~~~-~V-iGTT  103 (162)
T d1diha1          82 ------------------EGTLNHLAFCRQ--HGKG-MV-IGTT  103 (162)
T ss_dssp             ------------------HHHHHHHHHHHH--TTCE-EE-ECCC
T ss_pred             ------------------HHHHHHHHHHHh--ccce-eE-EecC
Confidence                              234477888888  5544 44 4555

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=97.67  E-value=3e-05  Score=57.95  Aligned_cols=115  Identities=11%  Similarity=0.097  Sum_probs=70.2

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCC--CEEEEEeCCCCcccccCCCCCc-cccCc--ccccCcchHHhhccCCCEEEEccC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPGKKT-RFFPG--VMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~-~~~~~--~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      +||.|+|+ |.+|..++-.|+.+|  .++..+++++............ ..+..  ..+. ..++ +.++++|+||-+||
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~-~~d~-~~l~~adiVVitaG   78 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIV-INDW-AALADADVVISTLG   78 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEE-ESCG-GGGTTCSEEEECCS
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCcccee-ccCH-HHhccccEEEEecc
Confidence            58999995 999999999999877  4899999877543211000000 00001  1111 1222 34789999999998


Q ss_pred             CCCCCC-CChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEec
Q 017977          126 TPIGTR-WSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELV  170 (363)
Q Consensus       126 ~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS  170 (363)
                      .+.... .......+.++.|..-.+.+.+.+.+  .+.+.++.+-|
T Consensus        79 ~~~~~~~~~g~~R~~l~~~N~~i~~~i~~~i~~--~~p~aivivvt  122 (146)
T d1hyha1          79 NIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKE--SGFHGVLVVIS  122 (146)
T ss_dssp             CGGGTC-------CTTHHHHHHHHHHHHHHHHH--TTCCSEEEECS
T ss_pred             ccccccccCCccHHHHHHHHHHHHHHHHHHHhh--cCCCeEEEEec
Confidence            642211 11112345677899999999999998  55565655443

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=97.65  E-value=4e-05  Score=59.85  Aligned_cols=74  Identities=11%  Similarity=-0.010  Sum_probs=50.3

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccc------cCcccccCcchHHhhccCCCEEEEcc
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRF------FPGVMIAEEPQWRDCIQGSTAVVNLA  124 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~------~~~~d~~~~~~~~~~~~~~d~Vi~~a  124 (363)
                      |||.|+|+ |.+|..++..|.++||+|.+++|++...+..........      ..........+..+.++++|+||-+.
T Consensus         2 k~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD~iii~v   80 (184)
T d1bg6a2           2 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIVV   80 (184)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEECS
T ss_pred             CEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhcCCCEEEEEE
Confidence            69999996 999999999999999999999998765433221110000      00001112235678889999999765


Q ss_pred             C
Q 017977          125 G  125 (363)
Q Consensus       125 ~  125 (363)
                      .
T Consensus        81 ~   81 (184)
T d1bg6a2          81 P   81 (184)
T ss_dssp             C
T ss_pred             c
Confidence            3

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=97.63  E-value=4.5e-05  Score=59.50  Aligned_cols=78  Identities=17%  Similarity=0.190  Sum_probs=45.1

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCC-CEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      .+++||.|+||||++|+.|++.|.++. .++..+..+............. ....-+..........+.++|+||.+...
T Consensus         3 ~~kikVaIlGATGyvG~elirLL~~HP~~ei~~l~S~~~aG~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dvvf~alp~   81 (183)
T d2cvoa1           3 GEEVRIAVLGASGYTGAEIVRLLANHPQFRIKVMTADRKAGEQFGSVFPH-LITQDLPNLVAVKDADFSNVDAVFCCLPH   81 (183)
T ss_dssp             SSCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECSTTTTSCHHHHCGG-GTTSCCCCCBCGGGCCGGGCSEEEECCSS
T ss_pred             CCccEEEEECcccHHHHHHHHHHHhCCCceEEEEeccccCCCcccccccc-ccccccccchhhhhhhhcccceeeecccc
Confidence            345799999999999999999999975 4766665333322221100000 00001111222223445689999977754

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.62  E-value=2.5e-05  Score=59.24  Aligned_cols=110  Identities=12%  Similarity=0.205  Sum_probs=70.1

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCC--EEEEEeCCCCccc----ccCCCCCccccCcccccCcchHHhhccCCCEEEEc
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAE----LIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNL  123 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~----~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~  123 (363)
                      ..||.|+|+ |.+|..++-.|+..|.  ++..++++.+...    .+.....  ....-......++ +.+.++|+||.+
T Consensus        19 ~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~--~~~~~~~~~~~d~-~~~~~adivvit   94 (159)
T d2ldxa1          19 RCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSL--FLSTPKIVFGKDY-NVSANSKLVIIT   94 (159)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTT--TCSCCEEEEESSG-GGGTTEEEEEEC
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcch--hcCCCeEEeccch-hhhccccEEEEe
Confidence            358999996 9999999999999874  8999998865432    1111000  0000011111223 446889999999


Q ss_pred             cCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEE
Q 017977          124 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLE  168 (363)
Q Consensus       124 a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~  168 (363)
                      ||.+...   .....+.++.|..-.+.++..+.+  .+.+.++.+
T Consensus        95 ag~~~~~---~~~R~dll~~N~~i~~~i~~~i~~--~~p~~iviv  134 (159)
T d2ldxa1          95 AGARMVS---GQTRLDLLQRNVAIMKAIVPGVIQ--NSPDCKIIV  134 (159)
T ss_dssp             CSCCCCT---TTCSSCTTHHHHHHHHHHTTTHHH--HSTTCEEEE
T ss_pred             cccccCC---CCCHHHHHHHHHHHHHHHHHHHhc--cCCCeEEEE
Confidence            9975332   223346677888888888888887  455544443

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.62  E-value=1.7e-05  Score=61.54  Aligned_cols=73  Identities=14%  Similarity=0.142  Sum_probs=51.1

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhh---c--cCCCEEEEcc
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC---I--QGSTAVVNLA  124 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~---~--~~~d~Vi~~a  124 (363)
                      ..+|||+||+|.+|...++.+...|.+|+++++++++.+...+.+.   ..-+|..+.+..+++   .  .++|+||.+.
T Consensus        29 g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~~~Ga---~~vi~~~~~~~~~~i~~~t~~~g~d~v~d~~  105 (174)
T d1yb5a2          29 GESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGA---HEVFNHREVNYIDKIKKYVGEKGIDIIIEML  105 (174)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTC---SEEEETTSTTHHHHHHHHHCTTCEEEEEESC
T ss_pred             CCEEEEEeccccccccccccccccCcccccccccccccccccccCc---ccccccccccHHHHhhhhhccCCceEEeecc
Confidence            4589999999999999999999999999999987765544433221   112344444433322   2  2589999987


Q ss_pred             C
Q 017977          125 G  125 (363)
Q Consensus       125 ~  125 (363)
                      +
T Consensus       106 g  106 (174)
T d1yb5a2         106 A  106 (174)
T ss_dssp             H
T ss_pred             c
Confidence            6

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.57  E-value=2.3e-05  Score=61.31  Aligned_cols=74  Identities=16%  Similarity=-0.008  Sum_probs=53.1

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhh---c--cCCCEEEEcc
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC---I--QGSTAVVNLA  124 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~---~--~~~d~Vi~~a  124 (363)
                      +.+|||+||+|.+|...++.+...|.+|+++++++++.+.+...+.   ...+|..+.+..+++   .  .++|+||.+.
T Consensus        26 g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l~~~Ga---~~vi~~~~~~~~~~v~~~t~~~g~d~v~d~~  102 (183)
T d1pqwa_          26 GERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGV---EYVGDSRSVDFADEILELTDGYGVDVVLNSL  102 (183)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCC---SEEEETTCSTHHHHHHHHTTTCCEEEEEECC
T ss_pred             CCEEEEECCCCCcccccchhhccccccceeeecccccccccccccc---cccccCCccCHHHHHHHHhCCCCEEEEEecc
Confidence            4589999999999999999999999999999998776655554332   112344444322322   2  3689999998


Q ss_pred             CC
Q 017977          125 GT  126 (363)
Q Consensus       125 ~~  126 (363)
                      +.
T Consensus       103 g~  104 (183)
T d1pqwa_         103 AG  104 (183)
T ss_dssp             CT
T ss_pred             cc
Confidence            74

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=97.56  E-value=8.2e-05  Score=56.14  Aligned_cols=65  Identities=17%  Similarity=0.211  Sum_probs=49.2

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      |||.|+| .|.+|+.+++.|++.||+|++.+++..+.......       +..+  .++..++++++|+||-+..
T Consensus         1 MkIgiIG-~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~-------~~~~--~~~~~e~~~~~diIi~~v~   65 (152)
T d1i36a2           1 LRVGFIG-FGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERAR-------TVGV--TETSEEDVYSCPVVISAVT   65 (152)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHH-------HHTC--EECCHHHHHTSSEEEECSC
T ss_pred             CEEEEEc-HHHHHHHHHHHHHHCCCeEEEEcCchhHHHHHhhh-------cccc--cccHHHHHhhcCeEEEEec
Confidence            6899998 69999999999999999999999887665433211       1222  2345677889999997764

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.55  E-value=3.7e-05  Score=58.17  Aligned_cols=39  Identities=18%  Similarity=0.332  Sum_probs=35.1

Q ss_pred             CCCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCC
Q 017977           47 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS   85 (363)
Q Consensus        47 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   85 (363)
                      .+.++||.|+||.|.+|+.+++.|.+.||+|.+.+|+..
T Consensus         6 ~~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~   44 (152)
T d2pv7a2           6 NSDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDW   44 (152)
T ss_dssp             CTTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG
T ss_pred             CCCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccc
Confidence            445679999999999999999999999999999998764

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.55  E-value=3e-05  Score=59.38  Aligned_cols=67  Identities=16%  Similarity=0.280  Sum_probs=52.6

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      |++|.++| .|.+|+.+++.|++.||+|.+.+|++.+.+.+...         .........+.+..+|+|+-+...
T Consensus         1 M~kIg~IG-lG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~---------~~~~~~~~~e~~~~~diii~~v~~   67 (162)
T d3cuma2           1 MKQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAA---------GASAARSARDAVQGADVVISMLPA   67 (162)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHT---------TCEECSSHHHHHTSCSEEEECCSC
T ss_pred             CCEEEEEE-EHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhh---------hccccchhhhhccccCeeeecccc
Confidence            57899998 79999999999999999999999998776554322         122334566778889999977753

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.53  E-value=3.8e-05  Score=50.21  Aligned_cols=41  Identities=29%  Similarity=0.305  Sum_probs=36.4

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccc
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL   89 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~   89 (363)
                      +.++|+|+||+|.+|...++.+...|++|+++++++++.+.
T Consensus        31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~   71 (77)
T d1o8ca2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEY   71 (77)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHH
T ss_pred             CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHH
Confidence            44689999999999999999999999999999998876554

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=97.52  E-value=0.0001  Score=56.74  Aligned_cols=69  Identities=10%  Similarity=0.050  Sum_probs=45.9

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCC--EEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      |++|+|+| .|.+|..+++.|.+.|+  +|++++|+++..+......    .  .|....+.-.....++|.||.+..
T Consensus         1 Mk~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~----~--~~~~~~~~~~~~~~~~dlIila~p   71 (171)
T d2g5ca2           1 MQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLG----I--IDEGTTSIAKVEDFSPDFVMLSSP   71 (171)
T ss_dssp             CCEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTT----S--CSEEESCGGGGGGTCCSEEEECSC
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhh----c--chhhhhhhhhhhccccccccccCC
Confidence            56899998 69999999999999985  7899999876655443321    1  121111111222346899996654

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.52  E-value=2.3e-05  Score=60.00  Aligned_cols=65  Identities=12%  Similarity=0.221  Sum_probs=51.5

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      |||.|+| .|.+|+.+++.|++.||+|++.+|++++.+.+....       ..  ..++..++++++|+||-+..
T Consensus         1 MkIgiIG-lG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~-------~~--~~~~~~e~~~~~d~ii~~v~   65 (161)
T d1vpda2           1 MKVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAG-------AE--TASTAKAIAEQCDVIITMLP   65 (161)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTT-------CE--ECSSHHHHHHHCSEEEECCS
T ss_pred             CEEEEEe-hhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhh-------hh--hcccHHHHHhCCCeEEEEcC
Confidence            6899999 699999999999999999999999988766554321       11  23446677888999998764

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=97.48  E-value=0.00031  Score=47.87  Aligned_cols=71  Identities=17%  Similarity=0.199  Sum_probs=48.2

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccc-cCCCCCccccCcccccCcchHHhhccCCCEEEEccCCC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL-IFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  127 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~~  127 (363)
                      ..++|+|+|. |-.|..+++.|.+.|++|++.+.+...... ....     ...+.+...+  ...+.++|.||-.-|.+
T Consensus         4 ~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~~~~~~~~~-----~~~~~~~~~~--~~~~~~~d~vi~SPGi~   75 (93)
T d2jfga1           4 QGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLPE-----AVERHTGSLN--DEWLMAADLIVASPGIA   75 (93)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSCTTGGGSCT-----TSCEEESBCC--HHHHHHCSEEEECTTSC
T ss_pred             CCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCchhHHHHhh-----ccceeecccc--hhhhccCCEEEECCCCC
Confidence            4578999996 999999999999999999999986654322 1111     1111222211  23456789999888764

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.47  E-value=0.00024  Score=51.55  Aligned_cols=30  Identities=17%  Similarity=0.426  Sum_probs=27.2

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEE
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVL   80 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~   80 (363)
                      |||.|.|++|..|+.|++.+.++|+++.+.
T Consensus         1 mki~i~G~~GrMG~~i~~~~~~~~~~l~~~   30 (128)
T d1vm6a3           1 MKYGIVGYSGRMGQEIQKVFSEKGHELVLK   30 (128)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHhcCCCeEEEE
Confidence            689999999999999999999999987754

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.46  E-value=2.5e-05  Score=60.92  Aligned_cols=74  Identities=15%  Similarity=0.067  Sum_probs=54.3

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhh---c--cCCCEEEEcc
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC---I--QGSTAVVNLA  124 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~---~--~~~d~Vi~~a  124 (363)
                      ..+|+|+||+|.+|..+++.+...|.+|+++++++.+.+.....+.   ...+|..+.+..+++   -  .++|+|+.+.
T Consensus        29 g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~lGa---~~vi~~~~~d~~~~v~~~t~g~g~d~v~d~~  105 (179)
T d1qora2          29 DEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGA---WQVINYREEDLVERLKEITGGKKVRVVYDSV  105 (179)
T ss_dssp             TCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTC---SEEEETTTSCHHHHHHHHTTTCCEEEEEECS
T ss_pred             CCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHHhcCC---eEEEECCCCCHHHHHHHHhCCCCeEEEEeCc
Confidence            3589999999999999999999999999999999987665543322   223455554433332   2  2579999988


Q ss_pred             CC
Q 017977          125 GT  126 (363)
Q Consensus       125 ~~  126 (363)
                      +.
T Consensus       106 g~  107 (179)
T d1qora2         106 GR  107 (179)
T ss_dssp             CG
T ss_pred             cH
Confidence            74

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.43  E-value=0.00049  Score=53.30  Aligned_cols=74  Identities=26%  Similarity=0.350  Sum_probs=50.9

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCc--ccccCCCCCcc----ccCcccccCcchHHhhccCCCEEEEcc
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK--AELIFPGKKTR----FFPGVMIAEEPQWRDCIQGSTAVVNLA  124 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~--~~~~~~~~~~~----~~~~~d~~~~~~~~~~~~~~d~Vi~~a  124 (363)
                      |+|.|+|+ |-.|.+|+..|.+.|++|....|..++  .+.+.......    .....++.-.+++.++++++|+||.+.
T Consensus         1 MkI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ad~Ii~av   79 (180)
T d1txga2           1 MIVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGV   79 (180)
T ss_dssp             CEEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHHHhccchhhccc
Confidence            79999995 999999999999999999999985443  12211111000    011223334567888899999999765


Q ss_pred             C
Q 017977          125 G  125 (363)
Q Consensus       125 ~  125 (363)
                      .
T Consensus        80 p   80 (180)
T d1txga2          80 S   80 (180)
T ss_dssp             C
T ss_pred             c
Confidence            3

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.43  E-value=4.7e-05  Score=59.88  Aligned_cols=102  Identities=16%  Similarity=0.248  Sum_probs=65.8

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCC--------ccccCc------------ccccCcch
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKK--------TRFFPG------------VMIAEEPQ  109 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~--------~~~~~~------------~d~~~~~~  109 (363)
                      .+||.|+|| |.+|+.++..++..|++|++++++++..+.......        ......            ..+.-..+
T Consensus         4 IkkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~d   82 (192)
T d1f0ya2           4 VKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATSTD   82 (192)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEESC
T ss_pred             eEEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhHHHHHHHHHHhhhhccchhhHHHHHHHHhhccccch
Confidence            359999996 999999999999999999999998864332111000        000000            01122345


Q ss_pred             HHhhccCCCEEEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEecc
Q 017977          110 WRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVK  171 (363)
Q Consensus       110 ~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~  171 (363)
                      +.+++.++|.||-+..-                 |+..-+.++..+.+  .-....|+.|++
T Consensus        83 ~~~a~~~ad~ViEav~E-----------------~l~~K~~v~~~l~~--~~~~~~ilasnT  125 (192)
T d1f0ya2          83 AASVVHSTDLVVEAIVE-----------------NLKVKNELFKRLDK--FAAEHTIFASNT  125 (192)
T ss_dssp             HHHHTTSCSEEEECCCS-----------------CHHHHHHHHHHHTT--TSCTTCEEEECC
T ss_pred             hHhhhcccceehhhccc-----------------chhHHHHHHHHHhh--hcccCceeeccC
Confidence            66778899999988753                 23334467777777  333446777776

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.42  E-value=2e-05  Score=60.51  Aligned_cols=73  Identities=23%  Similarity=0.188  Sum_probs=50.0

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccC--cchHHhh-ccCCCEEEEccCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAE--EPQWRDC-IQGSTAVVNLAGT  126 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~-~~~~d~Vi~~a~~  126 (363)
                      .+|||+||+|.+|...++.....|.+|+++++++++.+.+.......   .+|..+  .+..... -+++|+||.+.+.
T Consensus        25 ~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~~lGad~---vi~~~~~~~~~~~~~~~~gvd~vid~vgg  100 (167)
T d1tt7a2          25 GSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGASE---VISREDVYDGTLKALSKQQWQGAVDPVGG  100 (167)
T ss_dssp             CCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHHTCSE---EEEHHHHCSSCCCSSCCCCEEEEEESCCT
T ss_pred             CEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHHhhcccc---eEeccchhchhhhcccCCCceEEEecCcH
Confidence            47999999999999999999999999999999988876654432210   111111  1111111 1368999999875

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=97.40  E-value=3.6e-05  Score=58.18  Aligned_cols=65  Identities=15%  Similarity=0.215  Sum_probs=49.2

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEcc
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA  124 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a  124 (363)
                      |||.++| +|.+|+++++.|++.|++|++.+|+.++...+....      ++..  ..+..++++++|+||-+.
T Consensus         1 MkIg~IG-~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~------g~~~--~~~~~~~~~~~dvIilav   65 (152)
T d2ahra2           1 MKIGIIG-VGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL------ALPY--AMSHQDLIDQVDLVILGI   65 (152)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH------TCCB--CSSHHHHHHTCSEEEECS
T ss_pred             CEEEEEe-ccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhcccc------ceee--echhhhhhhccceeeeec
Confidence            6899998 699999999999999999999999877655543211      1122  234667788999999664

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=97.35  E-value=4.4e-05  Score=59.87  Aligned_cols=77  Identities=18%  Similarity=0.230  Sum_probs=52.9

Q ss_pred             CCCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCc-cccCcc----cccCcchHHhhccCCCEEE
Q 017977           47 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKT-RFFPGV----MIAEEPQWRDCIQGSTAVV  121 (363)
Q Consensus        47 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~----d~~~~~~~~~~~~~~d~Vi  121 (363)
                      ...|+||.|+| +|-.|.+++..|.+.||+|++.+|+++..+.+...... ....++    ++.-..++.++++++|+||
T Consensus         4 ~~~m~KI~ViG-aG~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l~~~i~~t~~l~~a~~~ad~ii   82 (189)
T d1n1ea2           4 LLYLNKAVVFG-SGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIIL   82 (189)
T ss_dssp             CCCEEEEEEEC-CSHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHTTCSCEE
T ss_pred             cceeceEEEEC-CCHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhhcccccccccccccccccccchhhhhccCCCCEEE
Confidence            34566899999 59999999999999999999999987654433211100 001111    2333456888899999999


Q ss_pred             Ecc
Q 017977          122 NLA  124 (363)
Q Consensus       122 ~~a  124 (363)
                      .+.
T Consensus        83 iav   85 (189)
T d1n1ea2          83 FVI   85 (189)
T ss_dssp             ECS
T ss_pred             EcC
Confidence            765

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.33  E-value=7.6e-05  Score=57.67  Aligned_cols=74  Identities=22%  Similarity=0.122  Sum_probs=50.5

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCc-chHHhhc--cCCCEEEEccCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEE-PQWRDCI--QGSTAVVNLAGT  126 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~--~~~d~Vi~~a~~  126 (363)
                      ..+|||+||+|.+|...++.+...|.+|+++++++.+.+.......   ...+|..+. ++.....  +++|+||.+.+.
T Consensus        32 g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~lGa---~~vi~~~~~~~~~~~~~~~~gvD~vid~vgg  108 (176)
T d1xa0a2          32 RGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGA---KEVLAREDVMAERIRPLDKQRWAAAVDPVGG  108 (176)
T ss_dssp             GCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTC---SEEEECC---------CCSCCEEEEEECSTT
T ss_pred             CCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHHhccc---ceeeecchhHHHHHHHhhccCcCEEEEcCCc
Confidence            4589999999999999999999999999999999888766544332   111222111 1111122  368999999885

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.29  E-value=0.00033  Score=56.14  Aligned_cols=64  Identities=11%  Similarity=0.083  Sum_probs=43.5

Q ss_pred             cCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchH----HhhccCCCEEEEccCCC
Q 017977           57 GATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW----RDCIQGSTAVVNLAGTP  127 (363)
Q Consensus        57 GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~----~~~~~~~d~Vi~~a~~~  127 (363)
                      -.||..|.+|++++..+|++|+++.-........  .     .....+...+++    .+.++++|++|++|+..
T Consensus        29 ~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~~p~--~-----~~~~~~~t~~~m~~~~~~~~~~~D~~i~aAAvs   96 (223)
T d1u7za_          29 HSSGKMGFAIAAAAARRGANVTLVSGPVSLPTPP--F-----VKRVDVMTALEMEAAVNASVQQQNIFIGCAAVA   96 (223)
T ss_dssp             CCCSHHHHHHHHHHHHTTCEEEEEECSCCCCCCT--T-----EEEEECCSHHHHHHHHHHHGGGCSEEEECCBCC
T ss_pred             CCcHHHHHHHHHHHHHcCCchhhhhcccccCccc--c-----cccceehhhHHHHHHHHhhhccceeEeeeechh
Confidence            3589999999999999999999998755432111  0     112233333333    34456899999999974

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=97.24  E-value=0.00013  Score=55.95  Aligned_cols=74  Identities=18%  Similarity=0.098  Sum_probs=54.0

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      .+.+|+|.|+ |.+|...++.+...|.+++++++++.+.+...+...   ...+|..+.+......+++|++|.+.+.
T Consensus        30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a~~lGa---d~~i~~~~~~~~~~~~~~~D~vid~~g~  103 (168)
T d1uufa2          30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGA---DEVVNSRNADEMAAHLKSFDFILNTVAA  103 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTC---SEEEETTCHHHHHTTTTCEEEEEECCSS
T ss_pred             CCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHHHhccCC---cEEEECchhhHHHHhcCCCceeeeeeec
Confidence            3468999996 999999999999999999999998876554332221   1124554555555566789999999885

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=97.24  E-value=0.00045  Score=53.30  Aligned_cols=74  Identities=11%  Similarity=0.178  Sum_probs=54.4

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      .+|.|+| .|.+|..+++.|++.||+|++.+|++++.+.+....... ....-....+++.+.+..+|.++-+...
T Consensus         3 ~nIg~IG-lG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~-~~~~~a~~~~~~~~~~~~~~~ii~~~~~   76 (176)
T d2pgda2           3 ADIALIG-LAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKG-TKVLGAHSLEEMVSKLKKPRRIILLVKA   76 (176)
T ss_dssp             BSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTT-SSCEECSSHHHHHHHBCSSCEEEECSCT
T ss_pred             CcEEEEe-EhHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhcccc-ccccchhhhhhhhhhhcccceEEEecCc
Confidence            4799999 699999999999999999999999998876654322100 0111233556777788889999877643

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=97.21  E-value=5.4e-05  Score=59.27  Aligned_cols=102  Identities=11%  Similarity=0.028  Sum_probs=61.8

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCC-----------CCCccccCc---ccccCcchHHhhcc
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP-----------GKKTRFFPG---VMIAEEPQWRDCIQ  115 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----------~~~~~~~~~---~d~~~~~~~~~~~~  115 (363)
                      .++|.|+|| |.+|+.++..++..|++|++++++++..+....           .........   .+........+.+.
T Consensus         4 I~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~   82 (186)
T d1wdka3           4 VKQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSYGDFG   82 (186)
T ss_dssp             CSSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEEESSSTTGG
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhhhhhHHhhhcccccchhhhhhhhceeeccccccccc
Confidence            458999996 999999999999999999999998765332110           000000000   00001111123356


Q ss_pred             CCCEEEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEecc
Q 017977          116 GSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVK  171 (363)
Q Consensus       116 ~~d~Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~  171 (363)
                      ++|.||-+...                 |+..-+.++..+.+  .-.+..|+.|++
T Consensus        83 ~adlViEav~E-----------------~l~~K~~lf~~l~~--~~~~~~IiaSnT  119 (186)
T d1wdka3          83 NVDLVVEAVVE-----------------NPKVKQAVLAEVEN--HVREDAILASNT  119 (186)
T ss_dssp             GCSEEEECCCS-----------------CHHHHHHHHHHHHT--TSCTTCEEEECC
T ss_pred             ccceeeeeecc-----------------hHHHHHHHHHHHHh--hcCCCeeEEecc
Confidence            88999987653                 23334567777777  334446677766

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.17  E-value=7.4e-05  Score=57.87  Aligned_cols=72  Identities=19%  Similarity=0.103  Sum_probs=49.9

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc--CCCEEEEccCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGT  126 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~Vi~~a~~  126 (363)
                      .+|||+||+|.+|+..++.....|.+|+++++++.+.+.......   ...+|..+.+ ..+.+.  ..|.||++.+.
T Consensus        33 ~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~~~lGa---d~vi~~~~~~-~~~~l~~~~~~~vvD~Vgg  106 (177)
T d1o89a2          33 GEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKSLGA---SRVLPRDEFA-ESRPLEKQVWAGAIDTVGD  106 (177)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTE---EEEEEGGGSS-SCCSSCCCCEEEEEESSCH
T ss_pred             CcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHHHhhcc---ccccccccHH-HHHHHHhhcCCeeEEEcch
Confidence            489999999999999999999999999999999887665543221   1112332222 222232  35889988763

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=97.15  E-value=0.00028  Score=53.17  Aligned_cols=24  Identities=38%  Similarity=0.657  Sum_probs=22.1

Q ss_pred             EEEEecCcchHHHHHHHHHHhCCC
Q 017977           52 TVSVTGATGFIGRRLVQRLQADNH   75 (363)
Q Consensus        52 ~vlVtGatG~iG~~l~~~L~~~g~   75 (363)
                      ||.|+||||++|..|++.|.++.+
T Consensus         3 kVaIvGATGyvG~eLirlL~~H~f   26 (154)
T d2gz1a1           3 TVAVVGATGAVGAQMIKMLEESTL   26 (154)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCCS
T ss_pred             EEEEECCCcHHHHHHHHHHHcCCC
Confidence            799999999999999999988864

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.11  E-value=0.00036  Score=53.38  Aligned_cols=75  Identities=20%  Similarity=0.068  Sum_probs=52.6

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCc-chHHhhccCCCEEEEccCCC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEE-PQWRDCIQGSTAVVNLAGTP  127 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~d~Vi~~a~~~  127 (363)
                      ...+|+|+|+ |.+|...++.+...|.+|+++++++.+.+...+.+.   ...++..+. +..+...++.|+|+.+.+..
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~~lGa---~~~i~~~~~~~~~~~~~~~~d~vi~~~~~~  102 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGA---DHYIATLEEGDWGEKYFDTFDLIVVCASSL  102 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTC---SEEEEGGGTSCHHHHSCSCEEEEEECCSCS
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhhccCC---cEEeeccchHHHHHhhhcccceEEEEecCC
Confidence            3458999996 999999999888899999999999887665433221   111333333 33445556789999987753

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.11  E-value=0.0014  Score=46.29  Aligned_cols=71  Identities=10%  Similarity=0.074  Sum_probs=47.5

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      .+++|+|+|+ |.+|..-++.|++.|.+|++++....+.......     ..++.+.....-.+.+.+++.|+.+.+
T Consensus        11 ~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~~~~~~~~~-----~~~i~~~~~~~~~~dl~~~~lv~~at~   81 (113)
T d1pjqa1          11 RDRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFIPQFTVWAN-----EGMLTLVEGPFDETLLDSCWLAIAATD   81 (113)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHT-----TTSCEEEESSCCGGGGTTCSEEEECCS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCChHHHHHHh-----cCCceeeccCCCHHHhCCCcEEeecCC
Confidence            4579999995 9999999999999999999998776553322111     111223222222344678888886654

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=97.07  E-value=0.00026  Score=55.74  Aligned_cols=39  Identities=28%  Similarity=0.438  Sum_probs=32.4

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF   91 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~   91 (363)
                      |||.|+| .|++|..++..| +.|++|++++.++...+.+.
T Consensus         1 MkI~ViG-lG~vGl~~a~~~-a~g~~V~g~Din~~~v~~l~   39 (196)
T d1dlja2           1 MKIAVAG-SGYVGLSLGVLL-SLQNEVTIVDILPSKVDKIN   39 (196)
T ss_dssp             CEEEEEC-CSHHHHHHHHHH-TTTSEEEEECSCHHHHHHHH
T ss_pred             CEEEEEC-CChhHHHHHHHH-HCCCcEEEEECCHHHHHHHh
Confidence            7999998 799999998755 57999999999887655443

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=96.97  E-value=0.00018  Score=54.22  Aligned_cols=64  Identities=16%  Similarity=0.198  Sum_probs=45.8

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCC-CEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEcc
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA  124 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a  124 (363)
                      |||.++|+ |.+|+++++.|++.| ++|++.+|++++.+.+....      ++...+.  . +.+.++|+||-+.
T Consensus         1 MkI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~------~~~~~~~--~-~~v~~~Div~lav   65 (152)
T d1yqga2           1 MNVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKEL------GVETSAT--L-PELHSDDVLILAV   65 (152)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHT------CCEEESS--C-CCCCTTSEEEECS
T ss_pred             CEEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhc------ccccccc--c-ccccccceEEEec
Confidence            68999995 999999999999877 99999999987766554321      1222221  1 1256689999553

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=96.96  E-value=0.00033  Score=53.75  Aligned_cols=73  Identities=15%  Similarity=0.111  Sum_probs=49.8

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      ..++|+|+|+ |..+++++..|.+.|.+|+++.|+.++.+.+......  ...+...+.++.  ....+|+|||+...
T Consensus        17 ~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~--~~~~~~~~~~~~--~~~~~dliIN~Tp~   89 (170)
T d1nyta1          17 PGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAH--TGSIQALSMDEL--EGHEFDLIINATSS   89 (170)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGG--GSSEEECCSGGG--TTCCCSEEEECCSC
T ss_pred             CCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhh--cccccccccccc--cccccceeeccccc
Confidence            4479999995 9999999999999999999999998776554322110  111122222222  23568999999765

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=96.87  E-value=0.0022  Score=49.40  Aligned_cols=63  Identities=24%  Similarity=0.225  Sum_probs=49.1

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      ..+++|.|+| .|.||+.+++.|..-|.+|++++|.+.+..               ..-.+++++++..+|+|+.+...
T Consensus        40 l~gk~vgIiG-~G~IG~~va~~l~~~g~~v~~~d~~~~~~~---------------~~~~~~l~ell~~sDiv~~~~pl  102 (181)
T d1qp8a1          40 IQGEKVAVLG-LGEIGTRVGKILAALGAQVRGFSRTPKEGP---------------WRFTNSLEEALREARAAVCALPL  102 (181)
T ss_dssp             CTTCEEEEES-CSTHHHHHHHHHHHTTCEEEEECSSCCCSS---------------SCCBSCSHHHHTTCSEEEECCCC
T ss_pred             ccCceEEEec-cccccccceeeeeccccccccccccccccc---------------eeeeechhhhhhccchhhccccc
Confidence            4457999999 699999999999999999999998764321               11123577889999999976654

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=96.80  E-value=0.00091  Score=51.11  Aligned_cols=74  Identities=26%  Similarity=0.143  Sum_probs=48.6

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCccccc--CcchHHhhc-----cCCCEEEEc
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIA--EEPQWRDCI-----QGSTAVVNL  123 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~--~~~~~~~~~-----~~~d~Vi~~  123 (363)
                      .+|+|+| +|.+|...+..+...|.+|+++++++.+.+......... ....+-.  +.+.+.+.+     .++|+||.+
T Consensus        28 ~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~~ga~~-~~~~~~~~~~~~~~~~~~~~~~g~g~D~vid~  105 (170)
T d1e3ja2          28 TTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADV-TLVVDPAKEEESSIIERIRSAIGDLPNVTIDC  105 (170)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSE-EEECCTTTSCHHHHHHHHHHHSSSCCSEEEEC
T ss_pred             CEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHHcCCcE-EEeccccccccchhhhhhhcccccCCceeeec
Confidence            5899998 699999999999999999999999987765443322100 0001111  112222222     368999999


Q ss_pred             cCC
Q 017977          124 AGT  126 (363)
Q Consensus       124 a~~  126 (363)
                      ++.
T Consensus       106 ~g~  108 (170)
T d1e3ja2         106 SGN  108 (170)
T ss_dssp             SCC
T ss_pred             CCC
Confidence            985

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=96.76  E-value=0.00068  Score=52.53  Aligned_cols=77  Identities=9%  Similarity=0.107  Sum_probs=54.8

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCC-EEEEEeCCCCcccccCCC---C---CccccCcccccCcchHHhhccCCCEEE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPG---K---KTRFFPGVMIAEEPQWRDCIQGSTAVV  121 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~---~---~~~~~~~~d~~~~~~~~~~~~~~d~Vi  121 (363)
                      ..++|+|+|+ |..|++++..|.+.|. +++++.|+++..+.....   .   ........++.+.+.+.+.+..+|.||
T Consensus        17 ~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~diiI   95 (182)
T d1vi2a1          17 KGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADILT   95 (182)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEEE
T ss_pred             CCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhcccceec
Confidence            4479999995 9999999999999985 899999988764432110   0   000011245556677777888999999


Q ss_pred             EccCC
Q 017977          122 NLAGT  126 (363)
Q Consensus       122 ~~a~~  126 (363)
                      |+...
T Consensus        96 N~Tp~  100 (182)
T d1vi2a1          96 NGTKV  100 (182)
T ss_dssp             ECSST
T ss_pred             cccCC
Confidence            99865

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=96.75  E-value=0.00027  Score=54.30  Aligned_cols=73  Identities=18%  Similarity=0.114  Sum_probs=49.6

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      ..++|+|.|+ |..|++++..|.+.+-+|+++.|+.++.+.+.....    ...++...+.-...+..+|+||++...
T Consensus        17 ~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~----~~~~~~~~~~~~~~~~~~diiIN~tp~   89 (171)
T d1p77a1          17 PNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQ----PYGNIQAVSMDSIPLQTYDLVINATSA   89 (171)
T ss_dssp             TTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHG----GGSCEEEEEGGGCCCSCCSEEEECCCC
T ss_pred             CCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHh----hccccchhhhccccccccceeeecccc
Confidence            4568999995 889999999999988899999999877655432210    001111111112235678999999875

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=96.75  E-value=0.001  Score=52.08  Aligned_cols=66  Identities=17%  Similarity=0.088  Sum_probs=49.6

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      ..+++|.|.| .|.||+.+++.|..-|.+|++.++........            +....+++.++++.+|+|+.++..
T Consensus        41 l~gk~vgIiG-~G~IG~~va~~l~~fg~~V~~~d~~~~~~~~~------------~~~~~~~l~~~l~~sDii~~~~pl  106 (197)
T d1j4aa1          41 VRDQVVGVVG-TGHIGQVFMQIMEGFGAKVITYDIFRNPELEK------------KGYYVDSLDDLYKQADVISLHVPD  106 (197)
T ss_dssp             GGGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCHHHHH------------TTCBCSCHHHHHHHCSEEEECSCC
T ss_pred             ccCCeEEEec-ccccchhHHHhHhhhcccccccCccccccccc------------ceeeeccccccccccccccccCCc
Confidence            4567999999 79999999999999999999998765442211            112345677888888988866654

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=96.72  E-value=0.00039  Score=53.73  Aligned_cols=74  Identities=20%  Similarity=0.341  Sum_probs=49.8

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccC-cc-cccCcchHHhhccCCCEEEEccC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFP-GV-MIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~-d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      |||.|+| .|.+|..+++.|++.||+|.+.+|++++.+.+.+........ .. ...+.+.+...+...+.++-+..
T Consensus         2 MkIGvIG-lG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (178)
T d1pgja2           2 MDVGVVG-LGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQ   77 (178)
T ss_dssp             BSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCC
T ss_pred             CEEEEEe-ehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccccchhhhhhhhHHHHhcccceEEEEeec
Confidence            6899999 799999999999999999999999988766553322111011 11 11233455555666666665543

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=96.71  E-value=0.00042  Score=53.11  Aligned_cols=74  Identities=19%  Similarity=0.128  Sum_probs=51.1

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCC-CEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhc-----cCCCEEEEc
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI-----QGSTAVVNL  123 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-----~~~d~Vi~~  123 (363)
                      ..+|+|+|++|.+|...+..+...| .+|+++++++.+.+.....+.   ...++..+.+..++..     .++|+||.+
T Consensus        28 g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~Ga---~~~i~~~~~~~~~~~~~~~~~~~~d~vid~  104 (170)
T d1jvba2          28 TKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGA---DYVINASMQDPLAEIRRITESKGVDAVIDL  104 (170)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTC---SEEEETTTSCHHHHHHHHTTTSCEEEEEES
T ss_pred             CCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHHcCC---ceeeccCCcCHHHHHHHHhhcccchhhhcc
Confidence            3589999999999999999999888 589999988766554432211   1123333444333333     258999999


Q ss_pred             cCC
Q 017977          124 AGT  126 (363)
Q Consensus       124 a~~  126 (363)
                      ++.
T Consensus       105 ~g~  107 (170)
T d1jvba2         105 NNS  107 (170)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            885

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.69  E-value=0.0016  Score=49.71  Aligned_cols=72  Identities=19%  Similarity=0.075  Sum_probs=48.2

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCC-EEEEEeCCCCcccccCCCCCccccCccccc--CcchHHhhc-----cCCCEEEE
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIA--EEPQWRDCI-----QGSTAVVN  122 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~--~~~~~~~~~-----~~~d~Vi~  122 (363)
                      .+|+|+|+ |.+|...+..+...|. +|+++++++.+.+...+.+.   ....+..  +.....+.+     .++|+||.
T Consensus        28 d~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~~Ga---~~~~~~~~~~~~~~~~~~~~~~g~g~Dvvid  103 (171)
T d1pl8a2          28 HKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGA---DLVLQISKESPQEIARKVEGQLGCKPEVTIE  103 (171)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTC---SEEEECSSCCHHHHHHHHHHHHTSCCSEEEE
T ss_pred             CEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHHHhCC---cccccccccccccccccccccCCCCceEEEe
Confidence            48999986 9999999999999997 89999998877654433221   0111111  222222222     26899999


Q ss_pred             ccCC
Q 017977          123 LAGT  126 (363)
Q Consensus       123 ~a~~  126 (363)
                      +.|.
T Consensus       104 ~~G~  107 (171)
T d1pl8a2         104 CTGA  107 (171)
T ss_dssp             CSCC
T ss_pred             ccCC
Confidence            9985

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=96.64  E-value=0.00098  Score=51.57  Aligned_cols=73  Identities=21%  Similarity=0.145  Sum_probs=49.7

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCC-EEEEEeCCCCcccccCCCCCccccCcccccCcc--h----HHhhc--cCCCEE
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEP--Q----WRDCI--QGSTAV  120 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~--~----~~~~~--~~~d~V  120 (363)
                      +.+|+|+|+ |.+|...+..+...|. +|+++++++.+.+...+.+.   ...++..+.+  +    +.+..  .++|+|
T Consensus        29 G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~lGa---~~vi~~~~~~~~~~~~~i~~~~~~~g~Dvv  104 (182)
T d1vj0a2          29 GKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGA---DLTLNRRETSVEERRKAIMDITHGRGADFI  104 (182)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTC---SEEEETTTSCHHHHHHHHHHHTTTSCEEEE
T ss_pred             CCEEEEECC-Cccchhheecccccccccccccccccccccccccccc---eEEEeccccchHHHHHHHHHhhCCCCceEE
Confidence            458999996 9999999999999997 89999998877655433221   1112333322  1    22222  258999


Q ss_pred             EEccCC
Q 017977          121 VNLAGT  126 (363)
Q Consensus       121 i~~a~~  126 (363)
                      |.+.|.
T Consensus       105 id~vG~  110 (182)
T d1vj0a2         105 LEATGD  110 (182)
T ss_dssp             EECSSC
T ss_pred             eecCCc
Confidence            999985

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=96.54  E-value=0.00092  Score=50.95  Aligned_cols=66  Identities=14%  Similarity=0.242  Sum_probs=46.3

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCC-EEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      .++|+|+|+ |..|++++..|.+.|. +|.++.|+.++.+.+...     +. ....+.  +  ...++|+|||+...
T Consensus        17 ~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~-----~~-~~~~~~--~--~~~~~DliINaTpi   83 (167)
T d1npya1          17 NAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAAL-----YG-YAYINS--L--ENQQADILVNVTSI   83 (167)
T ss_dssp             TSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHH-----HT-CEEESC--C--TTCCCSEEEECSST
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHh-----hh-hhhhhc--c--cccchhhheecccc
Confidence            368999995 9999999999999996 899999998776554321     11 111111  1  12468999998764

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=96.48  E-value=0.00056  Score=52.60  Aligned_cols=73  Identities=12%  Similarity=-0.016  Sum_probs=49.3

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCC-EEEEEeCCCCcccccCCCCCccccCcccccCcch---HHhhcc--CCCEEEEc
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQ---WRDCIQ--GSTAVVNL  123 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~---~~~~~~--~~d~Vi~~  123 (363)
                      ..+|+|+|+ |.+|...++.+...|. +|+++++++.+.+.....+.   ...+|..+.+.   +.+...  ++|+||.+
T Consensus        28 g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~lGa---~~~i~~~~~~~~~~v~~~t~g~G~D~vid~  103 (174)
T d1jqba2          28 GSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGA---TDILNYKNGHIEDQVMKLTNGKGVDRVIMA  103 (174)
T ss_dssp             TCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHHHTC---SEEECGGGSCHHHHHHHHTTTSCEEEEEEC
T ss_pred             CCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHHhhCc---cccccccchhHHHHHHHHhhccCcceEEEc
Confidence            347999985 9999999999999996 79999998866554332211   11234434332   233332  58999999


Q ss_pred             cCC
Q 017977          124 AGT  126 (363)
Q Consensus       124 a~~  126 (363)
                      ++.
T Consensus       104 ~g~  106 (174)
T d1jqba2         104 GGG  106 (174)
T ss_dssp             SSC
T ss_pred             cCC
Confidence            986

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=96.43  E-value=0.0023  Score=49.79  Aligned_cols=69  Identities=17%  Similarity=0.156  Sum_probs=50.0

Q ss_pred             CCCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           47 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        47 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      ...+++|.|.| .|-||+.+++.|..-|.+|.+.++........          ...+...+++.++++.+|+|+.+...
T Consensus        46 eL~gktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~----------~~~~~~~~~l~~ll~~sD~i~~~~pl  114 (193)
T d1mx3a1          46 RIRGETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYLSDGVER----------ALGLQRVSTLQDLLFHSDCVTLHCGL  114 (193)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCTTHHH----------HHTCEECSSHHHHHHHCSEEEECCCC
T ss_pred             eeeCceEEEec-cccccccceeeeeccccceeeccCcccccchh----------hhccccccchhhccccCCEEEEeecc
Confidence            34567999999 69999999999999999999999865432211          11233445677778888887765544

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=96.41  E-value=0.0085  Score=40.57  Aligned_cols=74  Identities=15%  Similarity=0.149  Sum_probs=48.5

Q ss_pred             CCCCccEEEEecCcchHH-HHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEcc
Q 017977           46 QKASQMTVSVTGATGFIG-RRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA  124 (363)
Q Consensus        46 ~~~~~~~vlVtGatG~iG-~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a  124 (363)
                      .+...++|.++|. |.+| ++||+.|.++|++|.+.++...+....+...      ++.+..... .+.+++.|.||...
T Consensus         4 ~~~~~~~ihfiGi-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~~~------Gi~v~~g~~-~~~i~~~d~vV~S~   75 (96)
T d1p3da1           4 EMRRVQQIHFIGI-GGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQA------GAKIYIGHA-EEHIEGASVVVVSS   75 (96)
T ss_dssp             CCTTCCEEEEETT-TSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHHHT------TCEEEESCC-GGGGTTCSEEEECT
T ss_pred             cchhCCEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHHC------CCeEEECCc-cccCCCCCEEEECC
Confidence            3445578999986 4445 8889999999999999999865543322211      123322211 23357889999888


Q ss_pred             CCC
Q 017977          125 GTP  127 (363)
Q Consensus       125 ~~~  127 (363)
                      +.+
T Consensus        76 AI~   78 (96)
T d1p3da1          76 AIK   78 (96)
T ss_dssp             TSC
T ss_pred             CcC
Confidence            874

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=96.35  E-value=0.0052  Score=46.92  Aligned_cols=74  Identities=18%  Similarity=0.113  Sum_probs=48.9

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCC-EEEEEeCCCCcccccCCCCCccccCcccccCcc-hHHhhc-----cCCCEEE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEP-QWRDCI-----QGSTAVV  121 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~-----~~~d~Vi  121 (363)
                      ...+|+|+| +|.+|...+..+...|. .|+++++++.+.+...+...   ...++....+ ......     .++|+||
T Consensus        28 ~G~~VlV~G-~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~~Ga---~~~i~~~~~~~~~~~~~~~~~~~G~d~vi  103 (174)
T d1e3ia2          28 PGSTCAVFG-LGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGA---TDCLNPRELDKPVQDVITELTAGGVDYSL  103 (174)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTC---SEEECGGGCSSCHHHHHHHHHTSCBSEEE
T ss_pred             CCCEEEEEC-CChHHHHHHHHHHHhCCceeeeeccchHHHHHHHHhCC---CcccCCccchhhhhhhHhhhhcCCCcEEE
Confidence            345899998 59999999999999996 78888888877544333221   1112222222 222222     3789999


Q ss_pred             EccCC
Q 017977          122 NLAGT  126 (363)
Q Consensus       122 ~~a~~  126 (363)
                      .++|.
T Consensus       104 e~~G~  108 (174)
T d1e3ia2         104 DCAGT  108 (174)
T ss_dssp             ESSCC
T ss_pred             Eeccc
Confidence            99986

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=96.35  E-value=0.011  Score=39.25  Aligned_cols=70  Identities=10%  Similarity=0.031  Sum_probs=46.3

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  127 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~~  127 (363)
                      |||-++|..|-==+.||+.|.++|++|.+.++...+....++...      +.+.-. .-.+.++++|.||...+.+
T Consensus         2 ~~ihfiGIgG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~~L~~~G------i~i~~g-h~~~~i~~~d~vV~SsAI~   71 (89)
T d1j6ua1           2 MKIHFVGIGGIGMSAVALHEFSNGNDVYGSNIEETERTAYLRKLG------IPIFVP-HSADNWYDPDLVIKTPAVR   71 (89)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTT------CCEESS-CCTTSCCCCSEEEECTTCC
T ss_pred             cEEEEEeECHHHHHHHHHHHHhCCCeEEEEeCCCChhHHHHHHCC------CeEEee-ecccccCCCCEEEEecCcC
Confidence            689999865544458999999999999999998765433322221      222211 1112246789999998874

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=96.32  E-value=0.0033  Score=44.84  Aligned_cols=35  Identities=17%  Similarity=0.299  Sum_probs=32.1

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCc
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK   86 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   86 (363)
                      ++|+|.|| |++|-.++..|.++|.+|+.+.+.+..
T Consensus        31 ~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~~   65 (121)
T d1d7ya2          31 SRLLIVGG-GVIGLELAATARTAGVHVSLVETQPRL   65 (121)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred             CeEEEECc-chhHHHHHHHhhcccceEEEEeecccc
Confidence            68999995 999999999999999999999997754

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=96.27  E-value=0.0044  Score=48.44  Aligned_cols=66  Identities=21%  Similarity=0.199  Sum_probs=48.4

Q ss_pred             CCCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           47 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        47 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      ....++|.|.| .|.||+.+++.|..-|.+|+++++.......          ...+   ..++.++++.+|+|+.+...
T Consensus        42 ~l~~ktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~----------~~~~---~~~l~~l~~~~D~v~~~~pl  107 (199)
T d1dxya1          42 ELGQQTVGVMG-TGHIGQVAIKLFKGFGAKVIAYDPYPMKGDH----------PDFD---YVSLEDLFKQSDVIDLHVPG  107 (199)
T ss_dssp             CGGGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCSSCC----------TTCE---ECCHHHHHHHCSEEEECCCC
T ss_pred             cccceeeeeee-cccccccccccccccceeeeccCCccchhhh----------cchh---HHHHHHHHHhcccceeeecc
Confidence            34457999999 6999999999999999999999986543221          1122   23567778888888766543

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.27  E-value=0.0042  Score=43.96  Aligned_cols=34  Identities=24%  Similarity=0.367  Sum_probs=31.5

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS   85 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   85 (363)
                      ++|+|+|| |++|..++..|.+.|.+|+++.|.+.
T Consensus        23 ~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          23 KSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CeEEEECC-CccceeeeeeecccccEEEEEEecce
Confidence            68999996 99999999999999999999998774

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=96.27  E-value=0.0041  Score=44.51  Aligned_cols=36  Identities=22%  Similarity=0.348  Sum_probs=32.0

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCc
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK   86 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   86 (363)
                      .++|+|.|| |++|..++..|.+.|.+|+++.|.+..
T Consensus        30 ~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~~~   65 (123)
T d1nhpa2          30 VNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILDRP   65 (123)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred             CCEEEEECC-hHHHHHHHHHhhccceEEEEEEecCcc
Confidence            468999995 999999999999999999999887643

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.26  E-value=0.0055  Score=46.87  Aligned_cols=73  Identities=11%  Similarity=0.091  Sum_probs=50.3

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCC-CEEEEEeCCCCcccccCCCCCccccCcccccCcch----HHhhc--cCCCEEEE
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQ----WRDCI--QGSTAVVN  122 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~----~~~~~--~~~d~Vi~  122 (363)
                      ..+|+|+|+ |.+|...+..+...| .+|+++++++.+.+...+.+.   ...+|..+.+.    +.+..  .++|+||.
T Consensus        30 g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~GA---~~~in~~~~~~~~~~~~~~~~g~G~d~vi~  105 (176)
T d1d1ta2          30 GSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGA---TECISPKDSTKPISEVLSEMTGNNVGYTFE  105 (176)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHHTC---SEEECGGGCSSCHHHHHHHHHTSCCCEEEE
T ss_pred             CCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhcCC---cEEECccccchHHHHHHHHhccccceEEEE
Confidence            347999985 999999999999999 589999999988654433222   11233333322    22222  37999999


Q ss_pred             ccCC
Q 017977          123 LAGT  126 (363)
Q Consensus       123 ~a~~  126 (363)
                      +.+.
T Consensus       106 ~~g~  109 (176)
T d1d1ta2         106 VIGH  109 (176)
T ss_dssp             CSCC
T ss_pred             eCCc
Confidence            9886

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=96.23  E-value=0.0017  Score=48.73  Aligned_cols=76  Identities=9%  Similarity=0.092  Sum_probs=58.2

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCCCCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIG  129 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~~~~  129 (363)
                      -+|+|+|+ |-.|..-++.+...|.+|++++.+....+.+.....  .....-..+.+.+.+.++++|+||.++-.+..
T Consensus        33 a~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~--~~~~~~~~~~~~l~~~~~~aDivI~aalipG~  108 (168)
T d1pjca1          33 GKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFG--SRVELLYSNSAEIETAVAEADLLIGAVLVPGR  108 (168)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG--GGSEEEECCHHHHHHHHHTCSEEEECCCCTTS
T ss_pred             cEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhc--ccceeehhhhhhHHHhhccCcEEEEeeecCCc
Confidence            58999995 999999999999999999999999877655432210  01223334667888999999999999976543

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=96.21  E-value=0.0034  Score=50.95  Aligned_cols=37  Identities=32%  Similarity=0.353  Sum_probs=32.8

Q ss_pred             CCCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCC
Q 017977           47 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR   84 (363)
Q Consensus        47 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   84 (363)
                      +.+.+||+|+|| |..|...+..|.++|++|.++.|..
T Consensus         3 ~~~~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           3 MHSQKRVVVLGS-GVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             CCCSCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCCCCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            344569999995 9999999999999999999999864

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.16  E-value=0.0035  Score=46.79  Aligned_cols=69  Identities=17%  Similarity=0.108  Sum_probs=52.3

Q ss_pred             CCCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           47 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        47 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      ...+++|+|+| .|.+|+.+++.|...|.+|.++..++-+.-+..          .|-.....+++++...|+||-+.|.
T Consensus        21 ~l~Gk~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~dp~~al~A~----------~dG~~v~~~~~a~~~adivvtaTGn   89 (163)
T d1li4a1          21 MIAGKVAVVAG-YGDVGKGCAQALRGFGARVIITEIDPINALQAA----------MEGYEVTTMDEACQEGNIFVTTTGC   89 (163)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH----------HTTCEECCHHHHTTTCSEEEECSSC
T ss_pred             eecCCEEEEec-cccccHHHHHHHHhCCCeeEeeecccchhHHhh----------cCceEeeehhhhhhhccEEEecCCC
Confidence            34557999999 899999999999999999999999875432211          1222333577788889999988775

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=96.16  E-value=0.0034  Score=47.79  Aligned_cols=76  Identities=18%  Similarity=0.198  Sum_probs=48.7

Q ss_pred             ccEEEEecCcchHHHH--HHHHHHhC----CCEEEEEeCCCCcccccCCCCC---ccccCcccccCcchHHhhccCCCEE
Q 017977           50 QMTVSVTGATGFIGRR--LVQRLQAD----NHQVRVLTRSRSKAELIFPGKK---TRFFPGVMIAEEPQWRDCIQGSTAV  120 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~--l~~~L~~~----g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~~~d~V  120 (363)
                      .|||.|+|| |.+|..  ++..|+..    +.++..+++++.+.+.......   ........+....+.+++++++|+|
T Consensus         2 ~mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~td~~eaL~dad~V   80 (171)
T d1obba1           2 SVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTMNLDDVIIDADFV   80 (171)
T ss_dssp             CCEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSEE
T ss_pred             CcEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEeCChhhcccCCCeE
Confidence            379999996 888865  34445432    4699999998765432110000   0001124555566788899999999


Q ss_pred             EEccCC
Q 017977          121 VNLAGT  126 (363)
Q Consensus       121 i~~a~~  126 (363)
                      +..++.
T Consensus        81 v~~~~~   86 (171)
T d1obba1          81 INTAMV   86 (171)
T ss_dssp             EECCCT
T ss_pred             eeeccc
Confidence            999876

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=96.14  E-value=0.012  Score=42.21  Aligned_cols=87  Identities=14%  Similarity=0.161  Sum_probs=58.3

Q ss_pred             ccEEEEecCc---chHHHHHHHHHHhCC-CEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           50 QMTVSVTGAT---GFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        50 ~~~vlVtGat---G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      .++|.|+|||   +..|..+.+.|.+.| ++|+.+.....+..              ...-..++.++-..+|.++-+..
T Consensus         8 PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~i~--------------G~~~y~sl~dlp~~vDlvvi~vp   73 (129)
T d2csua1           8 PKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEVQ--------------GVKAYKSVKDIPDEIDLAIIVVP   73 (129)
T ss_dssp             CSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEET--------------TEECBSSTTSCSSCCSEEEECSC
T ss_pred             CCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCccccC--------------CeEeecchhhcCCCCceEEEecC
Confidence            4689999999   999999999998766 79999875543211              11122223333346798886653


Q ss_pred             CCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEecc
Q 017977          126 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVK  171 (363)
Q Consensus       126 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~  171 (363)
                      .                   ..+..+++.|.+  .+++.++.+|+.
T Consensus        74 ~-------------------~~~~~~~~~~~~--~g~~~~vi~s~G   98 (129)
T d2csua1          74 K-------------------RFVKDTLIQCGE--KGVKGVVIITAG   98 (129)
T ss_dssp             H-------------------HHHHHHHHHHHH--HTCCEEEECCCS
T ss_pred             h-------------------HHhHHHHHHHHH--cCCCEEEEeccc
Confidence            2                   123367777777  689888887765

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=96.13  E-value=0.0065  Score=46.15  Aligned_cols=65  Identities=11%  Similarity=0.198  Sum_probs=42.9

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhC-CCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      ++||.|.| +|++|+.+++.|.+. +.+++++.....+....           ......+++....+++|+|+.+...
T Consensus         3 kirvgiiG-~G~ig~~~~~~l~~~~~~elvav~~~~~~~~~~-----------~~~~~~~~~~~~~~~~D~Vvi~tp~   68 (170)
T d1f06a1           3 NIRVAIVG-YGNLGRSVEKLIAKQPDMDLVGIFSRRATLDTK-----------TPVFDVADVDKHADDVDVLFLCMGS   68 (170)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHTTCSSEEEEEEEESSSCCSSS-----------SCEEEGGGGGGTTTTCSEEEECSCT
T ss_pred             cceEEEEC-ChHHHHHHHHHHHhCCCcEEEEEEecccccccc-----------cccccchhhhhhccccceEEEeCCC
Confidence            46899999 699999999999875 57777665433221111           1122233445556789999987654

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=96.13  E-value=0.0041  Score=44.05  Aligned_cols=36  Identities=14%  Similarity=0.357  Sum_probs=32.3

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCc
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK   86 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   86 (363)
                      +++|+|.|| |++|-.++..|.+.|.+|+++.|...-
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~i   57 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGNRI   57 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhccccceeeehhccc
Confidence            368999996 999999999999999999999987643

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.12  E-value=0.0064  Score=45.89  Aligned_cols=81  Identities=15%  Similarity=0.066  Sum_probs=53.1

Q ss_pred             CCCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccc--cCcchHHhhccCCCEEEEcc
Q 017977           47 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMI--AEEPQWRDCIQGSTAVVNLA  124 (363)
Q Consensus        47 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~--~~~~~~~~~~~~~d~Vi~~a  124 (363)
                      ...+++|+|+|-+.-+|+.|+..|+++|..|+.+......................++  ...+.+.+....+|+||..+
T Consensus        26 ~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~aDIvIsav  105 (171)
T d1edza1          26 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVITGV  105 (171)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEECC
T ss_pred             CCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccccccccccccceeeeeeccccccccchhHHhhccccCCEEEEcc
Confidence            4556899999999999999999999999999877754322111111110000111122  23455777777899999888


Q ss_pred             CCC
Q 017977          125 GTP  127 (363)
Q Consensus       125 ~~~  127 (363)
                      |.+
T Consensus       106 G~p  108 (171)
T d1edza1         106 PSE  108 (171)
T ss_dssp             CCT
T ss_pred             CCC
Confidence            864

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.10  E-value=0.0013  Score=51.14  Aligned_cols=74  Identities=16%  Similarity=0.054  Sum_probs=46.3

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCE-EEEEeCCCCcccccCCCCCccccCcccccCcchHH---hhc-cCCCEEEEccC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQ-VRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWR---DCI-QGSTAVVNLAG  125 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~---~~~-~~~d~Vi~~a~  125 (363)
                      .+|||+||+|.+|+..++.+...|.+ |++++++.++...+......  ...+|..+.+..+   +.. +++|+||.+.|
T Consensus        32 etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~ga--d~vi~~~~~~~~~~~~~~~~~GvDvv~D~vG  109 (187)
T d1vj1a2          32 QTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGF--DAAVNYKTGNVAEQLREACPGGVDVYFDNVG  109 (187)
T ss_dssp             CEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCC--SEEEETTSSCHHHHHHHHCTTCEEEEEESSC
T ss_pred             CEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccc--eEEeeccchhHHHHHHHHhccCceEEEecCC
Confidence            58999999999999999999989975 55556555444333211110  1224444433222   211 36999999987


Q ss_pred             C
Q 017977          126 T  126 (363)
Q Consensus       126 ~  126 (363)
                      .
T Consensus       110 g  110 (187)
T d1vj1a2         110 G  110 (187)
T ss_dssp             H
T ss_pred             c
Confidence            3

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.10  E-value=0.0046  Score=44.15  Aligned_cols=35  Identities=17%  Similarity=0.242  Sum_probs=32.1

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCc
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK   86 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   86 (363)
                      ++++|+|| |++|-.++..|.+.|.+|+++.|.+.-
T Consensus        24 ~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~~~   58 (122)
T d1v59a2          24 KRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQPQI   58 (122)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred             CeEEEECC-CchHHHHHHHHHhhCcceeEEEecccc
Confidence            68999995 999999999999999999999987754

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=96.07  E-value=0.0049  Score=43.55  Aligned_cols=35  Identities=23%  Similarity=0.327  Sum_probs=31.9

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCc
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK   86 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   86 (363)
                      ++|+|.|| |++|..++..|.+.|.+|+++.|.+..
T Consensus        22 ~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~~   56 (116)
T d1gesa2          22 ERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFDAP   56 (116)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred             CEEEEECC-ChhhHHHHHHhhccccEEEEEeecchh
Confidence            58999995 999999999999999999999997643

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.06  E-value=0.0076  Score=46.59  Aligned_cols=65  Identities=15%  Similarity=0.049  Sum_probs=48.7

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      ...++|.|.| .|.||+.+++.|..-|.+|++.++.......             .....+.++++++.+|+|+.++..
T Consensus        42 l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~-------------~~~~~~~l~ell~~sDii~i~~pl  106 (188)
T d1sc6a1          42 ARGKKLGIIG-YGHIGTQLGILAESLGMYVYFYDIENKLPLG-------------NATQVQHLSDLLNMSDVVSLHVPE  106 (188)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCCCCT-------------TCEECSCHHHHHHHCSEEEECCCS
T ss_pred             ccceEEEEee-cccchhhhhhhcccccceEeeccccccchhh-------------hhhhhhhHHHHHhhccceeecccC
Confidence            3457999998 7999999999999999999999986533211             112224677888889998877654

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=96.05  E-value=0.0066  Score=46.95  Aligned_cols=69  Identities=16%  Similarity=0.120  Sum_probs=50.1

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      ...++|.|.| .|.||+.+++.|..-|.+|...++...+.....         ...+....++.++++.+|+|+-+...
T Consensus        42 l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~---------~~~~~~~~~l~~~l~~sD~v~~~~pl  110 (188)
T d2naca1          42 LEAMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEK---------ELNLTWHATREDMYPVCDVVTLNCPL  110 (188)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHH---------HHTCEECSSHHHHGGGCSEEEECSCC
T ss_pred             ccccceeecc-ccccchhhhhhhhccCceEEEEeeccccccccc---------cccccccCCHHHHHHhccchhhcccc
Confidence            4457999999 699999999999999999999998764432211         11233455677778888888765544

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.03  E-value=0.0023  Score=48.54  Aligned_cols=73  Identities=23%  Similarity=0.141  Sum_probs=48.6

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHh---hccCCCEEEEccCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRD---CIQGSTAVVNLAGT  126 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~---~~~~~d~Vi~~a~~  126 (363)
                      ..+|+|.|+ |.+|...+..+...|.+|+++++++.+.+...+.+.   ...+|..+.+..+.   ...+.+.+|-+++.
T Consensus        28 g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~~~Ga---~~~i~~~~~~~~~~~~~~~~g~~~~i~~~~~  103 (166)
T d1llua2          28 GQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELARKLGA---SLTVNARQEDPVEAIQRDIGGAHGVLVTAVS  103 (166)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTC---SEEEETTTSCHHHHHHHHHSSEEEEEECCSC
T ss_pred             CCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhhhccCc---cccccccchhHHHHHHHhhcCCccccccccc
Confidence            458999986 999999999999999999999998877655443321   11234444443332   23456666666553

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=96.03  E-value=0.0029  Score=47.26  Aligned_cols=72  Identities=11%  Similarity=0.098  Sum_probs=53.2

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCccc----ccCCCCCccccCcccccCcchHHhh-ccCCCEEEEccC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE----LIFPGKKTRFFPGVMIAEEPQWRDC-IQGSTAVVNLAG  125 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~d~Vi~~a~  125 (363)
                      .+|+|+|. |-+|+.+++.|.+.|++|++++.+++...    .....  ......+|..+++.+.++ ++.+++||-+..
T Consensus         4 nHiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~--~~~vi~Gd~~d~~~L~~a~i~~a~~vi~~~~   80 (153)
T d1id1a_           4 DHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGD--NADVIPGDSNDSSVLKKAGIDRCRAILALSD   80 (153)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCT--TCEEEESCTTSHHHHHHHTTTTCSEEEECSS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcC--CcEEEEccCcchHHHHHhccccCCEEEEccc
Confidence            37999996 99999999999999999999998875422    11111  111445788888888654 578999997654

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=96.01  E-value=0.016  Score=42.17  Aligned_cols=84  Identities=13%  Similarity=0.113  Sum_probs=55.4

Q ss_pred             cEEEEecCc---chHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCCC
Q 017977           51 MTVSVTGAT---GFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  127 (363)
Q Consensus        51 ~~vlVtGat---G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~~  127 (363)
                      ++|.|.||+   +..|..+++.|.+.||+|+.+.-....   .         .+  ..-..++.++-..+|.|+-+... 
T Consensus        20 ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~---i---------~G--~~~~~sl~dlp~~iD~v~i~vp~-   84 (139)
T d2d59a1          20 KKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEE---V---------LG--RKCYPSVLDIPDKIEVVDLFVKP-   84 (139)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSE---E---------TT--EECBSSGGGCSSCCSEEEECSCH-
T ss_pred             CeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccc---c---------CC--CcccccccccCccceEEEEEeCH-
Confidence            589999998   789999999999999999988644321   1         11  11223344444567888766532 


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEe
Q 017977          128 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLEL  169 (363)
Q Consensus       128 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~S  169 (363)
                                        .....+++.|.+  .+++.+++.+
T Consensus        85 ------------------~~~~~~~~e~~~--~g~k~v~~~~  106 (139)
T d2d59a1          85 ------------------KLTMEYVEQAIK--KGAKVVWFQY  106 (139)
T ss_dssp             ------------------HHHHHHHHHHHH--HTCSEEEECT
T ss_pred             ------------------HHHHHHHHHHHH--hCCCEEEEec
Confidence                              123367777777  6787555433

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=96.01  E-value=0.031  Score=39.13  Aligned_cols=82  Identities=15%  Similarity=0.176  Sum_probs=53.5

Q ss_pred             cEEEEecCc---chHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCCC
Q 017977           51 MTVSVTGAT---GFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP  127 (363)
Q Consensus        51 ~~vlVtGat---G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~~  127 (363)
                      ++|.|.|++   +..|..+++.|++.||+|+.+..+..+   .         .  .+.-..++.++-..+|.++-+... 
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~---i---------~--G~~~y~sl~~lp~~~D~vvi~vp~-   66 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDE---I---------E--GLKCYRSVRELPKDVDVIVFVVPP-   66 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSE---E---------T--TEECBSSGGGSCTTCCEEEECSCH-
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEcccccc---c---------c--CccccccchhccccceEEEEEeCH-
Confidence            579999988   779999999999999999988643322   1         1  111223344444567988855432 


Q ss_pred             CCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEE
Q 017977          128 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVL  167 (363)
Q Consensus       128 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~  167 (363)
                                        ..+..+++.|.+  .+.+.+++
T Consensus        67 ------------------~~~~~~l~~~~~--~g~k~v~~   86 (116)
T d1y81a1          67 ------------------KVGLQVAKEAVE--AGFKKLWF   86 (116)
T ss_dssp             ------------------HHHHHHHHHHHH--TTCCEEEE
T ss_pred             ------------------HHHHHHHHHHHh--cCCceEEe
Confidence                              122366777777  68875544

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.96  E-value=0.016  Score=41.79  Aligned_cols=72  Identities=22%  Similarity=0.268  Sum_probs=45.5

Q ss_pred             EEEEecCcchHHHHHHHHHHh-CCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc-----CCCEEEEccC
Q 017977           52 TVSVTGATGFIGRRLVQRLQA-DNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-----GSTAVVNLAG  125 (363)
Q Consensus        52 ~vlVtGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-----~~d~Vi~~a~  125 (363)
                      ||.|.|++|.+|+.+++.+.+ .++++.+..-..+..........   -.-+|++.++...+.++     ++-.|+-..|
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~~~~~~~~~~---DvvIDFS~p~~~~~~~~~~~~~~~~~ViGTTG   77 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLLTDGNT---EVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTG   77 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCCTHHHHTTTC---SEEEECCCTTTHHHHHHHHHHTTCEEEECCCC
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCchhhhccccC---CEEEEcccHHHHHHHHHHHHhcCCCEEEeccc
Confidence            799999999999999999876 45776654422222221111111   22368888877765553     6677775555


Q ss_pred             C
Q 017977          126 T  126 (363)
Q Consensus       126 ~  126 (363)
                      .
T Consensus        78 ~   78 (135)
T d1yl7a1          78 F   78 (135)
T ss_dssp             C
T ss_pred             c
Confidence            4

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=95.92  E-value=0.0066  Score=43.03  Aligned_cols=35  Identities=29%  Similarity=0.247  Sum_probs=32.0

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCc
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK   86 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   86 (363)
                      ++++|+|| |+||-.++..|.+.|.+|+++.|...-
T Consensus        23 ~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~~l   57 (119)
T d3lada2          23 GKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMDKF   57 (119)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred             CeEEEECC-ChHHHHHHHHHHHcCCceEEEEeeccc
Confidence            68999995 999999999999999999999987643

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.90  E-value=0.0062  Score=43.62  Aligned_cols=35  Identities=20%  Similarity=0.299  Sum_probs=31.9

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCc
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK   86 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   86 (363)
                      ++|+|.|| |++|-.++..|.+.|.+|+++.|++.-
T Consensus        23 k~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~~~   57 (125)
T d3grsa2          23 GRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHDKV   57 (125)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred             CEEEEEcC-CccHHHHHHHHhcCCcEEEEEeecccc
Confidence            68999995 999999999999999999999997643

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=95.88  E-value=0.0056  Score=43.63  Aligned_cols=34  Identities=26%  Similarity=0.457  Sum_probs=31.0

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS   85 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   85 (363)
                      ++|+|.|| |++|-.++..|.+.|.+|+++.|.+.
T Consensus        33 ~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~   66 (122)
T d1xhca2          33 GEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGAM   66 (122)
T ss_dssp             SEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred             CcEEEECC-cHHHHHHHHHhhcccceEEEEecccc
Confidence            58999995 99999999999999999999998753

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=95.85  E-value=0.001  Score=51.22  Aligned_cols=78  Identities=15%  Similarity=0.137  Sum_probs=51.0

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccc-cCcccccCcchHHhhccCCCEEEEccCC
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRF-FPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      ...++|+|+| +|..+++++..|.+.| +|+++.|+.++.+.+........ .......+.+.+...+...|.||++...
T Consensus        16 ~~~k~vlIlG-aGG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~dliIn~tp~   93 (177)
T d1nvta1          16 VKDKNIVIYG-AGGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLDVDLDGVDIIINATPI   93 (177)
T ss_dssp             CCSCEEEEEC-CSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECTTCCCTTCCEEEECSCT
T ss_pred             cCCCEEEEEC-CcHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHHhhchhhhhhhhhhhhhhccchhhhhccCCcc
Confidence            3457999999 5899999999998777 89999999877654421100000 0001222344455556778999998765


Q ss_pred             C
Q 017977          127 P  127 (363)
Q Consensus       127 ~  127 (363)
                      .
T Consensus        94 g   94 (177)
T d1nvta1          94 G   94 (177)
T ss_dssp             T
T ss_pred             c
Confidence            3

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=95.85  E-value=0.0024  Score=48.93  Aligned_cols=74  Identities=12%  Similarity=0.067  Sum_probs=46.7

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCE-EEEEeCCCCcccccCCCCCccccCcccccCcchHHh---hcc-CCCEEEEc
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQ-VRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRD---CIQ-GSTAVVNL  123 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~---~~~-~~d~Vi~~  123 (363)
                      +..+|+|+|+ |.+|...+..+...|.+ |+++++++.+.+...+...   ..-+|..+.+..++   ... ++|+||.+
T Consensus        28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~Ga---~~~i~~~~~~~~~~i~~~t~gg~D~vid~  103 (174)
T d1f8fa2          28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGA---THVINSKTQDPVAAIKEITDGGVNFALES  103 (174)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTC---SEEEETTTSCHHHHHHHHTTSCEEEEEEC
T ss_pred             CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHHHcCC---eEEEeCCCcCHHHHHHHHcCCCCcEEEEc
Confidence            3458999997 99999999999888864 5566666655443332211   11234444333332   222 58999999


Q ss_pred             cCC
Q 017977          124 AGT  126 (363)
Q Consensus       124 a~~  126 (363)
                      .+.
T Consensus       104 ~G~  106 (174)
T d1f8fa2         104 TGS  106 (174)
T ss_dssp             SCC
T ss_pred             CCc
Confidence            985

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=95.85  E-value=0.0058  Score=46.67  Aligned_cols=74  Identities=14%  Similarity=0.096  Sum_probs=50.2

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCC-CEEEEEeCCCCcccccCCCCCccccCcccccCc-chHHhhc-----cCCCEEE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEE-PQWRDCI-----QGSTAVV  121 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~-----~~~d~Vi  121 (363)
                      .+.+|+|.|+ |.+|...+..+...| .+|+++++++.+.+...+...   ...++..+. +.+.+..     .++|+||
T Consensus        28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~Ga---~~~i~~~~~~~~~~~~~~~~~~~G~D~vi  103 (176)
T d2jhfa2          28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGA---TECVNPQDYKKPIQEVLTEMSNGGVDFSF  103 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTC---SEEECGGGCSSCHHHHHHHHTTSCBSEEE
T ss_pred             CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHhCC---eeEEecCCchhHHHHHHHHHhcCCCCEEE
Confidence            3458999998 679999999999988 599999999888665544332   111222222 2233222     3789999


Q ss_pred             EccCC
Q 017977          122 NLAGT  126 (363)
Q Consensus       122 ~~a~~  126 (363)
                      .+.|.
T Consensus       104 d~~G~  108 (176)
T d2jhfa2         104 EVIGR  108 (176)
T ss_dssp             ECSCC
T ss_pred             ecCCc
Confidence            99986

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=95.84  E-value=0.032  Score=38.93  Aligned_cols=75  Identities=8%  Similarity=0.030  Sum_probs=50.2

Q ss_pred             CccEEEEecCc----------chHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhc--cC
Q 017977           49 SQMTVSVTGAT----------GFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI--QG  116 (363)
Q Consensus        49 ~~~~vlVtGat----------G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~--~~  116 (363)
                      ..++|||+|+.          -+.|.+.+++|.+.|++++.+.-++....--.....   ...++-...+.+.+.+  ++
T Consensus         3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVstd~d~aD---~lYfeplt~e~v~~Ii~~E~   79 (121)
T d1a9xa4           3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSD---RLYFEPVTLEDVLEIVRIEK   79 (121)
T ss_dssp             SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTSTTSSS---EEECCCCSHHHHHHHHHHHC
T ss_pred             CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhcChhhcC---ceEEccCCHHHHHHHHHHhC
Confidence            44699999973          388999999999999999999998876443222211   1112333445555554  37


Q ss_pred             CCEEEEccCC
Q 017977          117 STAVVNLAGT  126 (363)
Q Consensus       117 ~d~Vi~~a~~  126 (363)
                      +|.|+-..|.
T Consensus        80 p~~ii~~~GG   89 (121)
T d1a9xa4          80 PKGVIVQYGG   89 (121)
T ss_dssp             CSEEECSSST
T ss_pred             CCEEEeehhh
Confidence            8998865553

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=95.82  E-value=0.0063  Score=42.83  Aligned_cols=35  Identities=26%  Similarity=0.322  Sum_probs=31.5

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCc
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK   86 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   86 (363)
                      ++++|.|| |++|-.++..|.+.|.+|+++.|.+.-
T Consensus        22 ~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~~i   56 (115)
T d1lvla2          22 QHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARERI   56 (115)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred             CeEEEECC-CHHHHHHHHHHhhcccceEEEeeeccc
Confidence            58999995 999999999999999999999887643

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=95.76  E-value=0.0065  Score=47.05  Aligned_cols=69  Identities=16%  Similarity=0.110  Sum_probs=49.7

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      ...++|.|.| .|.||+.+++.|..-|.+|.+.++.........         .......++++++++.+|+|+-+...
T Consensus        45 l~g~tvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~---------~~~~~~~~~l~~ll~~sD~v~l~~pl  113 (191)
T d1gdha1          45 LDNKTLGIYG-FGSIGQALAKRAQGFDMDIDYFDTHRASSSDEA---------SYQATFHDSLDSLLSVSQFFSLNAPS  113 (191)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHH---------HHTCEECSSHHHHHHHCSEEEECCCC
T ss_pred             ecccceEEee-cccchHHHHHHHHhhccccccccccccccchhh---------cccccccCCHHHHHhhCCeEEecCCC
Confidence            3457999999 699999999999999999999987664332211         01223345677888888988765544

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=95.67  E-value=0.0056  Score=46.74  Aligned_cols=74  Identities=16%  Similarity=0.099  Sum_probs=50.5

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCC-EEEEEeCCCCcccccCCCCCccccCcccccCcch-HHhhc-----cCCCEEE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQ-WRDCI-----QGSTAVV  121 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~-----~~~d~Vi  121 (363)
                      ...+|+|.|+ |.+|...+..+...|. +|+++++++.+.+.......   ...+|..+.+. +.+..     .++|+||
T Consensus        27 ~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~lGa---~~~i~~~~~d~~~~~~~~~~~~~G~d~vi  102 (174)
T d1p0fa2          27 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGA---TECLNPKDYDKPIYEVICEKTNGGVDYAV  102 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTC---SEEECGGGCSSCHHHHHHHHTTSCBSEEE
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHHHcCC---cEEEcCCCchhHHHHHHHHhcCCCCcEEE
Confidence            3458999995 9999999999999985 89999998877655443322   11233333331 22222     2689999


Q ss_pred             EccCC
Q 017977          122 NLAGT  126 (363)
Q Consensus       122 ~~a~~  126 (363)
                      .+.+.
T Consensus       103 d~~g~  107 (174)
T d1p0fa2         103 ECAGR  107 (174)
T ss_dssp             ECSCC
T ss_pred             EcCCC
Confidence            99885

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=95.64  E-value=0.0098  Score=43.04  Aligned_cols=36  Identities=22%  Similarity=0.358  Sum_probs=32.5

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCc
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK   86 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   86 (363)
                      .++|+|+|| |++|-.++..|.+.|.+|+++.+.+..
T Consensus        35 ~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~~~   70 (133)
T d1q1ra2          35 DNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAARV   70 (133)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred             CCEEEEECC-chHHHHHHHHHHhhCcceeeeeecccc
Confidence            368999995 999999999999999999999987754

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=95.63  E-value=0.014  Score=41.38  Aligned_cols=75  Identities=13%  Similarity=0.080  Sum_probs=51.9

Q ss_pred             CCccEEEEecC----------cchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc--
Q 017977           48 ASQMTVSVTGA----------TGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--  115 (363)
Q Consensus        48 ~~~~~vlVtGa----------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--  115 (363)
                      ...+||||+|+          --+.+.+.+++|.+.|++++.+.-++....--.....   ...++-...+.+.+.++  
T Consensus         5 ~~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~d~aD---~lYfePlt~e~v~~Ii~~E   81 (127)
T d1a9xa3           5 TDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPEMAD---ATYIEPIHWEVVRKIIEKE   81 (127)
T ss_dssp             SSCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCGGGSS---EEECSCCCHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcChhhcc---eeeeecCCHHHHHHHHHHh
Confidence            44579999997          4478999999999999999999998876432211111   11233445566666664  


Q ss_pred             CCCEEEEccC
Q 017977          116 GSTAVVNLAG  125 (363)
Q Consensus       116 ~~d~Vi~~a~  125 (363)
                      ++|.|+-..|
T Consensus        82 ~pd~il~~~G   91 (127)
T d1a9xa3          82 RPDAVLPTMG   91 (127)
T ss_dssp             CCSEEECSSS
T ss_pred             CcCCeEEEee
Confidence            7899996655

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=95.58  E-value=0.0092  Score=38.40  Aligned_cols=38  Identities=26%  Similarity=0.202  Sum_probs=33.2

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCccc
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE   88 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~   88 (363)
                      ||+|.|+| +|.+|+-++.+..+-|++|++++-+++...
T Consensus         1 ~k~vgIlG-~GQLgrMl~~Aa~~LG~~v~vldp~~~~pa   38 (78)
T d3etja2           1 MKQVCVLG-NGQLGRMLRQAGEPLGIAVWPVGLDAEPAA   38 (78)
T ss_dssp             CEEEEEEB-CSHHHHHHHHHHGGGTEEEEEECTTSCGGG
T ss_pred             CCEEEEEc-CCHHHHHHHHHHHHcCCEEEEEcCCCCCcc
Confidence            47899999 599999999999999999999997765543

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=95.58  E-value=0.0087  Score=48.62  Aligned_cols=37  Identities=22%  Similarity=0.259  Sum_probs=32.9

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCc
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK   86 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   86 (363)
                      ..+||+|+|| |..|..++..|.++|++|.++.|++..
T Consensus         3 ~~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~~~   39 (265)
T d2voua1           3 TTDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSPQP   39 (265)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred             CCCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence            3469999996 999999999999999999999987654

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=95.57  E-value=0.02  Score=43.53  Aligned_cols=76  Identities=20%  Similarity=0.267  Sum_probs=45.7

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCC-CEEEEEeCCCCccc-c-cCCCC-Cc-------cccCcccccCcchHHhhccCCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAE-L-IFPGK-KT-------RFFPGVMIAEEPQWRDCIQGST  118 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~-~-~~~~~-~~-------~~~~~~d~~~~~~~~~~~~~~d  118 (363)
                      |-||.|-| .|.||+.+++.|.+++ .+|+++........ . +.... ..       ..+....+.-...+...+.++|
T Consensus         1 MIKVaING-fGRIGR~v~Ral~~~~dievVaInd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~g~~~~~~~~vD   79 (178)
T d1b7go1           1 MVNVAVNG-YGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKTSD   79 (178)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHHCS
T ss_pred             CeEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEECCCCcHHHHHhcccCcceeccCccceeccccceecCCchhhhhhcCC
Confidence            45899999 7999999999999864 78888865432211 1 10000 00       0000011112234556667899


Q ss_pred             EEEEccCC
Q 017977          119 AVVNLAGT  126 (363)
Q Consensus       119 ~Vi~~a~~  126 (363)
                      +||-|.|.
T Consensus        80 iViecTG~   87 (178)
T d1b7go1          80 IVVDTTPN   87 (178)
T ss_dssp             EEEECCST
T ss_pred             EEEECCCC
Confidence            99999986

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=95.55  E-value=0.014  Score=44.36  Aligned_cols=74  Identities=9%  Similarity=0.065  Sum_probs=47.4

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCC-EEEEEeCCCCcccccCCCCCccccCcccccC-cchHHhhc-----cCCCEEE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAE-EPQWRDCI-----QGSTAVV  121 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~-----~~~d~Vi  121 (363)
                      ++.+|+|.|+ |.+|...++.+...|. .|+++++++.+.+..++.+.   ...+|..+ .+...+.+     .++|+||
T Consensus        28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~lGa---~~~i~~~~~~~~~~~~~~~~~~~g~D~vi  103 (176)
T d2fzwa2          28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGA---TECINPQDFSKPIQEVLIEMTDGGVDYSF  103 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTC---SEEECGGGCSSCHHHHHHHHTTSCBSEEE
T ss_pred             CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHHhCC---cEEEeCCchhhHHHHHHHHHcCCCCcEee
Confidence            3458999997 6799999999999985 67777777766544332221   11123322 23333332     3689999


Q ss_pred             EccCC
Q 017977          122 NLAGT  126 (363)
Q Consensus       122 ~~a~~  126 (363)
                      .+.|.
T Consensus       104 d~~G~  108 (176)
T d2fzwa2         104 ECIGN  108 (176)
T ss_dssp             ECSCC
T ss_pred             ecCCC
Confidence            99885

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=95.49  E-value=0.027  Score=42.00  Aligned_cols=58  Identities=19%  Similarity=0.331  Sum_probs=44.3

Q ss_pred             CCCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           47 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        47 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      ...+++|+|.|-+..+|+.|+..|.++|..|+.+.....                       .+.+...++|+||.++|.
T Consensus        34 ~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~-----------------------~l~~~~~~ADivI~a~G~   90 (166)
T d1b0aa1          34 DTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTK-----------------------NLRHHVENADLLIVAVGK   90 (166)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCS-----------------------CHHHHHHHCSEEEECSCC
T ss_pred             ccccceEEEEeccccccHHHHHHHHHhhccccccccccc-----------------------hhHHHHhhhhHhhhhccC
Confidence            345689999999999999999999999999988754321                       233445667788877776


Q ss_pred             C
Q 017977          127 P  127 (363)
Q Consensus       127 ~  127 (363)
                      +
T Consensus        91 p   91 (166)
T d1b0aa1          91 P   91 (166)
T ss_dssp             T
T ss_pred             c
Confidence            4

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.48  E-value=0.009  Score=42.52  Aligned_cols=32  Identities=25%  Similarity=0.260  Sum_probs=29.7

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRS   83 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~   83 (363)
                      ++++|+|| |+||-.++..|.+.|.+|+++.|+
T Consensus        21 ~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          21 GKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence            58999995 999999999999999999999875

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.48  E-value=0.011  Score=45.39  Aligned_cols=67  Identities=22%  Similarity=0.079  Sum_probs=48.1

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      ...+++.|+| .|.||+.+++.+..-|.+|++.++...+......           .....+++++++.+|+|+.+...
T Consensus        42 l~~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~~~-----------~~~~~~l~ell~~sDiv~~~~Pl  108 (184)
T d1ygya1          42 IFGKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVSPARAAQL-----------GIELLSLDDLLARADFISVHLPK  108 (184)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCHHHHHHH-----------TCEECCHHHHHHHCSEEEECCCC
T ss_pred             ccceeeeecc-ccchhHHHHHHhhhccceEEeecCCCChhHHhhc-----------CceeccHHHHHhhCCEEEEcCCC
Confidence            3457899999 6999999999999999999999987654332110           11233567778888888766544

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=95.45  E-value=0.024  Score=43.16  Aligned_cols=40  Identities=23%  Similarity=0.300  Sum_probs=34.6

Q ss_pred             CCCCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCc
Q 017977           46 QKASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK   86 (363)
Q Consensus        46 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   86 (363)
                      .....++|+|+|| |..|-..+..|.++||+|+++.+.+..
T Consensus        39 ~~~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~~~   78 (179)
T d1ps9a3          39 PAVQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHSEI   78 (179)
T ss_dssp             SCSSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred             CCCCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccCcc
Confidence            3344579999995 999999999999999999999997754

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=95.42  E-value=0.015  Score=44.10  Aligned_cols=76  Identities=13%  Similarity=-0.021  Sum_probs=54.5

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccc----------------------cCcc
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMI----------------------AEEP  108 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~----------------------~~~~  108 (363)
                      -+|+|+|| |-.|..-++.....|.+|.+++.+....+.+.......  ..++.                      ...+
T Consensus        30 a~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l~~~~--i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~  106 (183)
T d1l7da1          30 ARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKF--ITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  106 (183)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEE--CCC-----------------------CCHHH
T ss_pred             cEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhhcce--EEEeccccccccccccchhhcCHHHHHHHHH
Confidence            38999996 99999999999999999999999998766554332211  11100                      0223


Q ss_pred             hHHhhccCCCEEEEccCCCCC
Q 017977          109 QWRDCIQGSTAVVNLAGTPIG  129 (363)
Q Consensus       109 ~~~~~~~~~d~Vi~~a~~~~~  129 (363)
                      .+.+.+.++|+||-.+-.+..
T Consensus       107 ~l~~~l~~aDlVI~talipG~  127 (183)
T d1l7da1         107 AVLKELVKTDIAITTALIPGK  127 (183)
T ss_dssp             HHHHHHTTCSEEEECCCCTTS
T ss_pred             HHHHHHHhhhhheeeeecCCc
Confidence            456667899999998876533

>d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Transcriptional repressor Rex, C-terminal domain
domain: Transcriptional repressor Rex, C-terminal domain
species: Thermus aquaticus [TaxId: 271]

Probab=95.40  E-value=0.016  Score=41.41  Aligned_cols=92  Identities=12%  Similarity=0.087  Sum_probs=57.9

Q ss_pred             cEEEEecCcchHHHHHHHHHHh-CCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhcc-CCCEEEEccCCCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQA-DNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-GSTAVVNLAGTPI  128 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~d~Vi~~a~~~~  128 (363)
                      -+|+|.|| |.+|+.|++++.. .|++++++.-+........       ..++.+...+.+.+... .++.++-+...  
T Consensus         4 ~~v~I~Ga-G~~G~~l~~~l~~~~~~~iv~fiDdd~~k~G~~-------I~Gi~V~~~~~l~~~~~~~i~iai~~i~~--   73 (126)
T d2dt5a2           4 WGLCIVGM-GRLGSALADYPGFGESFELRGFFDVDPEKVGRP-------VRGGVIEHVDLLPQRVPGRIEIALLTVPR--   73 (126)
T ss_dssp             EEEEEECC-SHHHHHHHHCSCCCSSEEEEEEEESCTTTTTCE-------ETTEEEEEGGGHHHHSTTTCCEEEECSCH--
T ss_pred             ceEEEEcC-CHHHHHHHHhHhhcCCcEEEEEEeCchHhcCCE-------ECCEEEecHHHHHHHHhhcccEEEEeCCH--
Confidence            38999995 9999999998753 5789888866543322111       33455556677777665 34555533321  


Q ss_pred             CCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEecc
Q 017977          129 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLELVK  171 (363)
Q Consensus       129 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~SS~  171 (363)
                                       ...+.+++.|.+  .+++.+.-++..
T Consensus        74 -----------------~~~~~I~d~l~~--~gIk~I~~f~~~   97 (126)
T d2dt5a2          74 -----------------EAAQKAADLLVA--AGIKGILNFAPV   97 (126)
T ss_dssp             -----------------HHHHHHHHHHHH--HTCCEEEECSSS
T ss_pred             -----------------HHHHHHHHHHHH--cCCCEEeecCce
Confidence                             122467888888  688866555443

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=95.37  E-value=0.0094  Score=42.47  Aligned_cols=35  Identities=23%  Similarity=0.282  Sum_probs=32.3

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCc
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK   86 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   86 (363)
                      ++++|+|| |++|-.++..|.+.|.+|+++.|++..
T Consensus        26 ~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~~~   60 (123)
T d1dxla2          26 KKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFASEI   60 (123)
T ss_dssp             SEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred             CeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEcccc
Confidence            68999995 999999999999999999999998755

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.33  E-value=0.024  Score=42.82  Aligned_cols=76  Identities=13%  Similarity=0.117  Sum_probs=45.2

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCC-CEEEEEeCC-CCccc-ccCCCC-CccccC--------cccccCcchHHhhccCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRS-RSKAE-LIFPGK-KTRFFP--------GVMIAEEPQWRDCIQGS  117 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~-~~~~~-~~~~~~-~~~~~~--------~~d~~~~~~~~~~~~~~  117 (363)
                      .+||.|-| .|.||+.+++.|.+++ .+|+++.-. +.... .+.... ......        ...+.....+..+++++
T Consensus         2 ~irIaING-fGRIGR~v~Ral~~~~dieiVaINd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v   80 (172)
T d2czca2           2 KVKVGVNG-YGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEKV   80 (172)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTTC
T ss_pred             cEEEEEEC-CCHHHHHHHHHHHhCCCceEEEEecCCChHHHHHhhhcCceeecccccceeeecccCccccchhhhhhccC
Confidence            46999999 6999999999998764 677777542 22211 111100 000000        00111223555667799


Q ss_pred             CEEEEccCC
Q 017977          118 TAVVNLAGT  126 (363)
Q Consensus       118 d~Vi~~a~~  126 (363)
                      |+||-|.|.
T Consensus        81 DvViEcTG~   89 (172)
T d2czca2          81 DIIVDATPG   89 (172)
T ss_dssp             SEEEECCST
T ss_pred             CEEEECCCC
Confidence            999999986

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=95.29  E-value=0.013  Score=45.51  Aligned_cols=68  Identities=16%  Similarity=0.136  Sum_probs=48.4

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhc-cCCCEEEEccCC
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI-QGSTAVVNLAGT  126 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-~~~d~Vi~~a~~  126 (363)
                      ..+++|+|-| .|.+|+++++.|.+.|.+|++.+.+.........       .+.+..+.++   ++ .+||+++-||..
T Consensus        25 L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~~~-------~g~~~~~~~~---~~~~~~DI~iPcA~~   93 (201)
T d1c1da1          25 LDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHAVA-------LGHTAVALED---VLSTPCDVFAPCAMG   93 (201)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-------TTCEECCGGG---GGGCCCSEEEECSCS
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHHHHh-------hcccccCccc---cccccceeeeccccc
Confidence            4567999999 7999999999999999999998876654333221       1123333333   33 379999988754

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.28  E-value=0.038  Score=41.38  Aligned_cols=38  Identities=16%  Similarity=0.172  Sum_probs=33.6

Q ss_pred             CCCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCC
Q 017977           47 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR   84 (363)
Q Consensus        47 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   84 (363)
                      ...+++|+|+|-+..+|+.|+..|+++|..|+.+....
T Consensus        36 ~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t   73 (170)
T d1a4ia1          36 PIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKT   73 (170)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             ccccceEEEEecCCccchHHHHHHHhccCceEEEeccc
Confidence            45668999999999999999999999999999977644

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=95.22  E-value=0.012  Score=42.10  Aligned_cols=35  Identities=14%  Similarity=0.191  Sum_probs=31.7

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCc
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK   86 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   86 (363)
                      ++++|.|| |+||-.++..|.+.|.+|+++.+.+.-
T Consensus        27 ~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~~i   61 (125)
T d1ojta2          27 GKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMDGL   61 (125)
T ss_dssp             SEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred             CeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeeccc
Confidence            68999995 999999999999999999999987643

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.21  E-value=0.0065  Score=45.88  Aligned_cols=73  Identities=23%  Similarity=0.082  Sum_probs=48.1

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcc---hHHhhccCCCEEEEccCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEP---QWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~~~~~d~Vi~~a~~  126 (363)
                      ..+|+|.|+ |-+|...+..+...|.+|+++++++.+.+..+..+.   ..-.+..+.+   .+.+..++.+.+|.+++.
T Consensus        28 g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k~~Ga---~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  103 (168)
T d1rjwa2          28 GEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGA---DLVVNPLKEDAAKFMKEKVGGVHAAVVTAVS  103 (168)
T ss_dssp             TCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTC---SEEECTTTSCHHHHHHHHHSSEEEEEESSCC
T ss_pred             CCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhhhhcCc---ceecccccchhhhhcccccCCCceEEeecCC
Confidence            358999975 999999999999999999999998877655443321   1112332322   233444566777766653

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=95.09  E-value=0.013  Score=49.61  Aligned_cols=39  Identities=26%  Similarity=0.330  Sum_probs=33.7

Q ss_pred             CCCccEEEEecCcchHHHHHHHHHHhCC--CEEEEEeCCCCc
Q 017977           47 KASQMTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSK   86 (363)
Q Consensus        47 ~~~~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~   86 (363)
                      |++|++|+|+|| |.-|...+..|+++|  ++|+++.|+..-
T Consensus         1 m~~~KrVaIIGa-G~sGl~~A~~L~~~~~~~~v~vfEk~~~i   41 (335)
T d2gv8a1           1 LPTIRKIAIIGA-GPSGLVTAKALLAEKAFDQVTLFERRGSP   41 (335)
T ss_dssp             CCSCCEEEEECC-SHHHHHHHHHHHTTTCCSEEEEECSSSSS
T ss_pred             CCCCCeEEEECc-CHHHHHHHHHHHHhCCCCCEEEEECCCCC
Confidence            457789999995 999999999999876  699999998753

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=95.08  E-value=0.022  Score=40.20  Aligned_cols=36  Identities=19%  Similarity=0.147  Sum_probs=32.2

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCc
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK   86 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   86 (363)
                      .++|+|.|| |++|..++..|.+.|.+|.++.|.+..
T Consensus        22 ~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~~~   57 (121)
T d1mo9a2          22 GSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTEPL   57 (121)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcchhheEeeccchh
Confidence            468999995 999999999999999999999997643

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=95.02  E-value=0.011  Score=45.62  Aligned_cols=37  Identities=11%  Similarity=0.116  Sum_probs=32.1

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCC-EEEEEeCCCCc
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSK   86 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~   86 (363)
                      .++||+|+|| |..|-..+.+|.+.|+ +|+++.|++..
T Consensus         3 ~~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~~   40 (196)
T d1gtea4           3 YSAKIALLGA-GPASISCASFLARLGYSDITIFEKQEYV   40 (196)
T ss_dssp             GGCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSSC
T ss_pred             CCCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCcc
Confidence            3579999996 9999999999999998 59999987643

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=94.97  E-value=0.013  Score=44.16  Aligned_cols=76  Identities=11%  Similarity=0.144  Sum_probs=45.1

Q ss_pred             cEEEEecCcchHHHH-HHHHHHhC-----CCEEEEEeCCCCcccccCCCCC---ccccCcccccCcchHHhhccCCCEEE
Q 017977           51 MTVSVTGATGFIGRR-LVQRLQAD-----NHQVRVLTRSRSKAELIFPGKK---TRFFPGVMIAEEPQWRDCIQGSTAVV  121 (363)
Q Consensus        51 ~~vlVtGatG~iG~~-l~~~L~~~-----g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~~~d~Vi  121 (363)
                      .||.|+|| |.+|.. ++..|+.+     +-++..++.++++.+.......   ........+.-..+..++++++|+||
T Consensus         4 ~KI~iIGa-Gsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~eal~~AD~Vv   82 (167)
T d1u8xx1           4 FSIVIAGG-GSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTDPEEAFTDVDFVM   82 (167)
T ss_dssp             EEEEEECT-TSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEESCHHHHHSSCSEEE
T ss_pred             ceEEEECC-ChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEecCChhhccCCCCEEE
Confidence            58999998 545543 44455542     2389999998866432111000   00011123334456778899999999


Q ss_pred             EccCCC
Q 017977          122 NLAGTP  127 (363)
Q Consensus       122 ~~a~~~  127 (363)
                      ..++.+
T Consensus        83 itag~~   88 (167)
T d1u8xx1          83 AHIRVG   88 (167)
T ss_dssp             ECCCTT
T ss_pred             ECCCcC
Confidence            999874

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=94.94  E-value=0.011  Score=45.81  Aligned_cols=75  Identities=17%  Similarity=0.066  Sum_probs=48.3

Q ss_pred             CccEEEEecCcchHHHHHHHHHHhCCC-EEEEEeCCCCcccccCCCCCccccCcccccCcc---hHHhhcc--CCCEEEE
Q 017977           49 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEP---QWRDCIQ--GSTAVVN  122 (363)
Q Consensus        49 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~~~--~~d~Vi~  122 (363)
                      .+.+|+|+|+ |-+|...+..+...|. +|+++++++.+.+.....+.   ....+..+.+   .+.+...  ++|++|.
T Consensus        25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~Ga---~~~~~~~~~~~~~~i~~~t~g~g~D~vid  100 (195)
T d1kola2          25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGF---EIADLSLDTPLHEQIAALLGEPEVDCAVD  100 (195)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTC---EEEETTSSSCHHHHHHHHHSSSCEEEEEE
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhhhccc---cEEEeCCCcCHHHHHHHHhCCCCcEEEEE
Confidence            3458999985 9999888888877775 89999988876554433321   1112222322   2223322  6899999


Q ss_pred             ccCCC
Q 017977          123 LAGTP  127 (363)
Q Consensus       123 ~a~~~  127 (363)
                      +.|..
T Consensus       101 ~vG~~  105 (195)
T d1kola2         101 AVGFE  105 (195)
T ss_dssp             CCCTT
T ss_pred             Ccccc
Confidence            99853

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=94.93  E-value=0.15  Score=38.06  Aligned_cols=118  Identities=9%  Similarity=0.031  Sum_probs=64.7

Q ss_pred             ccEEEEecC-cchHHHHHHHHHHhCC----CEEEEEeCCCCcc--cccCCCCC---ccccCcccccCcchHHhhccCCCE
Q 017977           50 QMTVSVTGA-TGFIGRRLVQRLQADN----HQVRVLTRSRSKA--ELIFPGKK---TRFFPGVMIAEEPQWRDCIQGSTA  119 (363)
Q Consensus        50 ~~~vlVtGa-tG~iG~~l~~~L~~~g----~~V~~~~r~~~~~--~~~~~~~~---~~~~~~~d~~~~~~~~~~~~~~d~  119 (363)
                      +|||.|+|| +.+.+..++..+....    -++..++.++...  +.......   ........+....+..++++++|+
T Consensus         1 k~KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~~~~td~~~al~gaDv   80 (169)
T d1s6ya1           1 RLKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLDRRRALDGADF   80 (169)
T ss_dssp             CEEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSE
T ss_pred             CcEEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCceeeecCCchhhcCCCCE
Confidence            379999997 3355555555555432    3889999877542  11100000   000111333344556778899999


Q ss_pred             EEEccCCCCCCCCC-----------------hhhHHHHHHHHHHHHHHHHHHHHhCCCCCCCeEEEe
Q 017977          120 VVNLAGTPIGTRWS-----------------SEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLEL  169 (363)
Q Consensus       120 Vi~~a~~~~~~~~~-----------------~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~S  169 (363)
                      ||.+|+......+.                 ....-.....|+...+.+++.+.+  .....+++.-
T Consensus        81 Vv~ta~~~~~~~~~r~~~i~~~~gi~~~~t~g~~~~~~~~~n~~i~~~i~~~i~~--~~pda~~i~v  145 (169)
T d1s6ya1          81 VTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEE--LCPDAWLINF  145 (169)
T ss_dssp             EEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHH--HCTTCEEEEC
T ss_pred             EEEccccCCCCCeehhhhhhhhcCceeccccCcchhhhccccHHHHHHHHHHHhh--cCCCeEEEEe
Confidence            99999864211000                 000011234577777888888888  5555555544

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=94.91  E-value=0.0048  Score=47.79  Aligned_cols=38  Identities=18%  Similarity=0.168  Sum_probs=32.2

Q ss_pred             cEEEE-ecCcchHHHHHHHHHHhCCCEEEEEeCCCCccc
Q 017977           51 MTVSV-TGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE   88 (363)
Q Consensus        51 ~~vlV-tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~   88 (363)
                      .+|+| +||+|.+|...++.....|.+|++++|+....+
T Consensus        30 ~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~   68 (189)
T d1gu7a2          30 KDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLD   68 (189)
T ss_dssp             TCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHH
T ss_pred             CEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccc
Confidence            35666 699999999999999999999999998876543

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=94.90  E-value=0.01  Score=44.26  Aligned_cols=37  Identities=19%  Similarity=0.416  Sum_probs=25.4

Q ss_pred             CCccEEEEecCcchHHHHH-HHHHHhCC-CEEEEE-eCCCC
Q 017977           48 ASQMTVSVTGATGFIGRRL-VQRLQADN-HQVRVL-TRSRS   85 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l-~~~L~~~g-~~V~~~-~r~~~   85 (363)
                      .+++||.|+| +|.+|+.+ .+.|.... .+++++ +|++.
T Consensus         2 ~kkirvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~   41 (157)
T d1nvmb1           2 NQKLKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAA   41 (157)
T ss_dssp             CSCEEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTT
T ss_pred             CCCcEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchh
Confidence            3457999999 89999865 45554443 477776 45554

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=94.79  E-value=0.092  Score=42.06  Aligned_cols=35  Identities=20%  Similarity=0.212  Sum_probs=29.9

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCC-EEEEEeCCCCc
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSK   86 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~   86 (363)
                      .+|+|.| .|.+|++++..|...|. ++++++.+.-+
T Consensus        31 ~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~D~Ve   66 (247)
T d1jw9b_          31 SRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDTVS   66 (247)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCC
T ss_pred             CCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCcccc
Confidence            5899999 59999999999999995 88888866533

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=94.70  E-value=0.012  Score=44.57  Aligned_cols=72  Identities=19%  Similarity=0.188  Sum_probs=46.9

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCC-CEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhc-----cCCCEEEEc
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI-----QGSTAVVNL  123 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-----~~~d~Vi~~  123 (363)
                      ..+|+|.|+ |.+|...+..+...| ..|+++++++.+.+.......   ...+|. +.+.+++..     .++|+||.+
T Consensus        33 g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~ga---~~~i~~-~~~~~~~~~~~~~~~g~d~vid~  107 (172)
T d1h2ba2          33 GAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGA---DHVVDA-RRDPVKQVMELTRGRGVNVAMDF  107 (172)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTC---SEEEET-TSCHHHHHHHHTTTCCEEEEEES
T ss_pred             CCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHhhccc---ceeecC-cccHHHHHHHhhCCCCceEEEEe
Confidence            358999985 999999999998877 477888888766554433221   111222 223333332     258999999


Q ss_pred             cCC
Q 017977          124 AGT  126 (363)
Q Consensus       124 a~~  126 (363)
                      ++.
T Consensus       108 ~g~  110 (172)
T d1h2ba2         108 VGS  110 (172)
T ss_dssp             SCC
T ss_pred             cCc
Confidence            985

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=94.53  E-value=0.022  Score=47.81  Aligned_cols=35  Identities=26%  Similarity=0.519  Sum_probs=31.8

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS   85 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   85 (363)
                      .+||+|+|| |.-|...|..|.+.|++|.++.++..
T Consensus         2 ~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~~   36 (314)
T d2bi7a1           2 SKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRDH   36 (314)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCCC
Confidence            479999995 99999999999999999999998774

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=94.39  E-value=0.019  Score=45.51  Aligned_cols=71  Identities=14%  Similarity=0.122  Sum_probs=49.4

Q ss_pred             CCCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           47 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        47 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      ....++|+|-| -|.+|+++++.|.+.|.+|++.+.+.........      ..+.+..+.+++-  -.+||+++=||-.
T Consensus        36 ~l~g~~v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~------~~g~~~~~~~~~~--~~~cDIl~PcA~~  106 (230)
T d1leha1          36 SLEGLAVSVQG-LGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVA------EEGADAVAPNAIY--GVTCDIFAPCALG  106 (230)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH------HHCCEECCGGGTT--TCCCSEEEECSCS
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEeecccHHHHHHHHH------hcCCcccCCcccc--cccccEecccccc
Confidence            34567999999 6999999999999999999998876544332221      1123333443331  2369999999864

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=94.32  E-value=0.017  Score=47.62  Aligned_cols=35  Identities=26%  Similarity=0.414  Sum_probs=31.7

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCc
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK   86 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   86 (363)
                      |+|+|+|| |.-|...+.+|.++|++|.++.+++..
T Consensus         1 m~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~~~   35 (347)
T d2ivda1           1 MNVAVVGG-GISGLAVAHHLRSRGTDAVLLESSARL   35 (347)
T ss_dssp             CCEEEECC-BHHHHHHHHHHHTTTCCEEEECSSSSS
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCEEEEecCCCC
Confidence            68999996 999999999999999999999987643

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=94.30  E-value=0.025  Score=47.47  Aligned_cols=38  Identities=32%  Similarity=0.413  Sum_probs=33.2

Q ss_pred             CCCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCC
Q 017977           47 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS   85 (363)
Q Consensus        47 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   85 (363)
                      ..+.++|+|+|| |..|-..+.+|.++|++|.++.+++.
T Consensus        27 ~~~pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~~   64 (370)
T d2iida1          27 TSNPKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASER   64 (370)
T ss_dssp             CSSCCEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCCCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            344579999995 99999999999999999999998664

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=94.26  E-value=0.028  Score=41.61  Aligned_cols=69  Identities=13%  Similarity=0.155  Sum_probs=52.4

Q ss_pred             CCCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           47 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        47 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      +..+++++|.| -|.+|+-+++.|...|.+|+++..+|-..-+-.       ..++.+   ..++++++..|+||-+.|.
T Consensus        20 ~laGk~vvV~G-YG~vGrG~A~~~rg~Ga~V~V~E~DPi~alqA~-------mdGf~v---~~~~~a~~~aDi~vTaTGn   88 (163)
T d1v8ba1          20 LISGKIVVICG-YGDVGKGCASSMKGLGARVYITEIDPICAIQAV-------MEGFNV---VTLDEIVDKGDFFITCTGN   88 (163)
T ss_dssp             CCTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHH-------TTTCEE---CCHHHHTTTCSEEEECCSS
T ss_pred             eecCCEEEEec-ccccchhHHHHHHhCCCEEEEEecCchhhHHHH-------hcCCcc---CchhHccccCcEEEEcCCC
Confidence            34457999999 799999999999999999999999885432211       122233   4567888899999988876

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=94.23  E-value=0.055  Score=40.70  Aligned_cols=76  Identities=16%  Similarity=0.292  Sum_probs=44.7

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCC-CEEEEEeCCCCccc--ccCCCC-Cccc-cCc-------ccccCcchHHhhccCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAE--LIFPGK-KTRF-FPG-------VMIAEEPQWRDCIQGS  117 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~--~~~~~~-~~~~-~~~-------~d~~~~~~~~~~~~~~  117 (363)
                      |++|.|-| -|.||+.+++.|.+++ .+|.++........  .+.... .... ...       ..+.-...+..+++++
T Consensus         1 M~~VgING-fGRIGR~v~R~l~~~~di~vvaInd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~~~v   79 (171)
T d1cf2o1           1 MKAVAING-YGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLDEA   79 (171)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHHTC
T ss_pred             CeEEEEEc-CcHHHHHHHHHHHhCCCceEEEEecCCcHHHHHHHHhcCCceEecccccceeecccCcccCCChhHhhcCC
Confidence            57899998 7999999999998876 57777754332211  111100 0000 000       0011122455566789


Q ss_pred             CEEEEccCC
Q 017977          118 TAVVNLAGT  126 (363)
Q Consensus       118 d~Vi~~a~~  126 (363)
                      |+||-|.|.
T Consensus        80 DvViEcTG~   88 (171)
T d1cf2o1          80 DIVIDCTPE   88 (171)
T ss_dssp             SEEEECCST
T ss_pred             CEEEEccCC
Confidence            999999986

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=94.20  E-value=0.019  Score=46.84  Aligned_cols=32  Identities=22%  Similarity=0.418  Sum_probs=29.5

Q ss_pred             EEEEecCcchHHHHHHHHHHhCCCEEEEEeCCC
Q 017977           52 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR   84 (363)
Q Consensus        52 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   84 (363)
                      .|+|+|| |.+|..++.+|.++|++|.++.+..
T Consensus         6 DvvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           6 EAVVIGG-GIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            3999995 9999999999999999999999864

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=94.18  E-value=0.017  Score=39.84  Aligned_cols=37  Identities=16%  Similarity=0.038  Sum_probs=29.5

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCC
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS   85 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   85 (363)
                      -..++|+|.| +|.-|.-++..|.+..-+|+.+.|+..
T Consensus        30 f~gK~VlVVG-~g~Sa~dia~~l~~~ak~v~~~~~r~~   66 (107)
T d2gv8a2          30 FVGESVLVVG-GASSANDLVRHLTPVAKHPIYQSLLGG   66 (107)
T ss_dssp             GTTCCEEEEC-SSHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred             cCCCeEEEEC-CCCCHHHHHHHHHHhcCEEEEEEecCc
Confidence            3457999999 599999999999988767666666553

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=94.10  E-value=0.013  Score=42.11  Aligned_cols=70  Identities=14%  Similarity=0.118  Sum_probs=50.5

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhh-ccCCCEEEEccC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC-IQGSTAVVNLAG  125 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~d~Vi~~a~  125 (363)
                      ++|+|+| .|-+|+.+++.|.  |++|.+++.++...+......  ..+..+|..+++.+.++ +++++.+|-+..
T Consensus         1 kHivI~G-~g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~~~~~--~~~i~Gd~~~~~~L~~a~i~~A~~vi~~~~   71 (129)
T d2fy8a1           1 RHVVICG-WSESTLECLRELR--GSEVFVLAEDENVRKKVLRSG--ANFVHGDPTRVSDLEKANVRGARAVIVNLE   71 (129)
T ss_dssp             CCEEEES-CCHHHHHHHHTSC--GGGEEEEESCTTHHHHHHHTT--CEEEESCTTSHHHHHHTTCTTCSEEEECCS
T ss_pred             CEEEEEC-CCHHHHHHHHHHc--CCCCEEEEcchHHHHHHHhcC--ccccccccCCHHHHHHhhhhcCcEEEEecc
Confidence            3689998 5999999999984  567888888887655543221  11445788888888764 578899996543

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=94.04  E-value=0.044  Score=43.59  Aligned_cols=38  Identities=18%  Similarity=0.226  Sum_probs=33.4

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCc
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK   86 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   86 (363)
                      ...++|+|+|| |..|...+.+|.++|++|+++.++..-
T Consensus        47 ~~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~~~   84 (233)
T d1djqa3          47 KNKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAEKI   84 (233)
T ss_dssp             SSCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred             cCCceEEEEcc-cHHHHHHHHHHHHhccceeeEeecccc
Confidence            44579999995 999999999999999999999887644

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.00  E-value=0.028  Score=41.36  Aligned_cols=35  Identities=11%  Similarity=0.271  Sum_probs=30.8

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCC
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRS   83 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~   83 (363)
                      ...++|||+|| |.+|..-++.|++.|.+|++++-.
T Consensus        11 l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1          11 LKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             CTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             eCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            34579999997 999999999999999999999653

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=93.95  E-value=0.033  Score=42.14  Aligned_cols=73  Identities=15%  Similarity=0.064  Sum_probs=47.3

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCC-CEEEEEeCCCCcccccCCCCCccccCcccccCcch----HHhhc--cCCCEEEE
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQ----WRDCI--QGSTAVVN  122 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~----~~~~~--~~~d~Vi~  122 (363)
                      ..+|+|+|+ |.+|...+..+...| .+|+++++++.+.+...+.+.   ...+|..+.+.    ..+..  .++|+||.
T Consensus        29 g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~GA---d~~in~~~~~~~~~~~~~~~~~~G~d~vid  104 (175)
T d1cdoa2          29 GSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGA---TDFVNPNDHSEPISQVLSKMTNGGVDFSLE  104 (175)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTC---CEEECGGGCSSCHHHHHHHHHTSCBSEEEE
T ss_pred             CCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHHHcCC---cEEEcCCCcchhHHHHHHhhccCCcceeee
Confidence            358999996 667777777777766 589999998887665544332   11233333322    22222  36999999


Q ss_pred             ccCC
Q 017977          123 LAGT  126 (363)
Q Consensus       123 ~a~~  126 (363)
                      +.|.
T Consensus       105 ~~G~  108 (175)
T d1cdoa2         105 CVGN  108 (175)
T ss_dssp             CSCC
T ss_pred             ecCC
Confidence            9985

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=93.83  E-value=0.034  Score=45.90  Aligned_cols=34  Identities=26%  Similarity=0.343  Sum_probs=31.2

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS   85 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   85 (363)
                      |||+|+|| |.-|...+.+|.+.|++|.++.+++.
T Consensus         2 KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~~   35 (373)
T d1seza1           2 KRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEGK   35 (373)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSSS
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence            68999995 99999999999999999999988654

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=93.82  E-value=0.0068  Score=45.04  Aligned_cols=63  Identities=16%  Similarity=0.109  Sum_probs=37.1

Q ss_pred             EEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           53 VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        53 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      |-++| +|.+|+++++.|.+.++.+.+.+|++++.+.+.+...      ...   .+..++++.+|+||-+..
T Consensus         2 IgfIG-~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~~------~~~---~~~~~~~~~~DiVil~v~   64 (153)
T d2i76a2           2 LNFVG-TGTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVYG------GKA---ATLEKHPELNGVVFVIVP   64 (153)
T ss_dssp             CEEES-CCHHHHHHHHTTC----CCCEECSSHHHHHHHHHHTC------CCC---CSSCCCCC---CEEECSC
T ss_pred             EEEEe-CcHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhccc------ccc---cchhhhhccCcEEEEecc
Confidence            45677 7999999999886644444678898877766544321      112   123456778899997653

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=93.41  E-value=0.041  Score=41.39  Aligned_cols=34  Identities=18%  Similarity=0.273  Sum_probs=29.3

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCC--EEEEEeCCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSR   84 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~   84 (363)
                      ++||+|+|| |++|-.++.+|.+.++  +|+++.+++
T Consensus         2 gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           2 GRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            479999996 9999999999998774  788887765

>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=93.35  E-value=0.042  Score=42.38  Aligned_cols=34  Identities=21%  Similarity=0.239  Sum_probs=29.1

Q ss_pred             cEEEEecCcchHHHHHHHHHHhC--CCEEEEEeCCCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQAD--NHQVRVLTRSRS   85 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~   85 (363)
                      |||+|+|| |++|-.++..|.+.  +.+|+++.|...
T Consensus         1 ~KVvIIGg-G~~G~e~A~~l~~~~~~~~V~v~~~~~~   36 (198)
T d1nhpa1           1 MKVIVLGS-SHGGYEAVEELLNLHPDAEIQWYEKGDF   36 (198)
T ss_dssp             CEEEEECS-SHHHHHHHHHHHHHCTTSEEEEEESSSS
T ss_pred             CEEEEECC-cHHHHHHHHHHHhcCCCCeEEEEeCCCc
Confidence            79999996 99999999999875  468999988653

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=93.29  E-value=0.034  Score=46.13  Aligned_cols=35  Identities=20%  Similarity=0.353  Sum_probs=31.4

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS   85 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   85 (363)
                      |..|+|+|| |.-|..+|..|.+.|++|.++.+++.
T Consensus         1 M~dv~IIGa-G~sGl~~A~~L~~~g~~V~iiEk~~~   35 (298)
T d1i8ta1           1 MYDYIIVGS-GLFGAVCANELKKLNKKVLVIEKRNH   35 (298)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHGGGTCCEEEECSSSS
T ss_pred             CccEEEECC-cHHHHHHHHHHHhCCCcEEEEECCCC
Confidence            457999995 99999999999999999999998763

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=93.25  E-value=0.051  Score=39.83  Aligned_cols=35  Identities=20%  Similarity=0.378  Sum_probs=29.2

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhC--CCEEEEEeCCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQAD--NHQVRVLTRSR   84 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~   84 (363)
                      |++|.|.|+||-||...++-+.+.  .++|.+++-..
T Consensus         1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~   37 (151)
T d1q0qa2           1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGK   37 (151)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESS
T ss_pred             CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence            578999999999999999988875  47888886433

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.97  E-value=0.033  Score=45.80  Aligned_cols=33  Identities=30%  Similarity=0.324  Sum_probs=30.7

Q ss_pred             EEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCC
Q 017977           52 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS   85 (363)
Q Consensus        52 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   85 (363)
                      +|+|.|| |-.|..++..|.+.|++|.++.|++.
T Consensus         4 ~V~IvGa-Gp~Gl~~A~~L~~~G~~v~vlE~~~~   36 (292)
T d1k0ia1           4 QVAIIGA-GPSGLLLGQLLHKAGIDNVILERQTP   36 (292)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            6999996 99999999999999999999999764

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.96  E-value=0.066  Score=43.39  Aligned_cols=35  Identities=23%  Similarity=0.324  Sum_probs=31.2

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCC-CEEEEEeCCCCc
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSK   86 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~   86 (363)
                      ++|+|+|| |..|..++..|.+.| ++|.++.|++..
T Consensus         2 ~~V~IvGa-G~aGl~~A~~L~~~Gi~~V~V~Er~~~~   37 (288)
T d3c96a1           2 IDILIAGA-GIGGLSCALALHQAGIGKVTLLESSSEI   37 (288)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESSSSC
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCeEEEEeCCCCC
Confidence            68999996 999999999999999 599999987644

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=92.87  E-value=0.056  Score=39.57  Aligned_cols=35  Identities=40%  Similarity=0.502  Sum_probs=29.1

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhC--CCEEEEEeCCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQAD--NHQVRVLTRSR   84 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~   84 (363)
                      +++|.|.|+||-||....+-+.+.  .++|.+++-..
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~   38 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANR   38 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESS
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCC
Confidence            479999999999999999988775  48888886443

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=92.76  E-value=0.018  Score=43.12  Aligned_cols=76  Identities=12%  Similarity=0.069  Sum_probs=44.3

Q ss_pred             cEEEEecCcchHHHHHHHH-HHh-C----CCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEcc
Q 017977           51 MTVSVTGATGFIGRRLVQR-LQA-D----NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA  124 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~-L~~-~----g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a  124 (363)
                      |||.|+|| |-+|..++-. |+. .    +.++..++.++.+................++.-.....+.++++|+||..|
T Consensus         1 mKIaiIGa-Gs~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~~~~~~~t~~~~~~l~~aDvVVita   79 (162)
T d1up7a1           1 MRIAVIGG-GSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLISDTFEGAVVDAKYVIFQF   79 (162)
T ss_dssp             CEEEEETT-TCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEEEECSSHHHHHTTCSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhccCceEEEecCcccccCCCCEEEEec
Confidence            69999998 5566655533 322 1    358999999876543211000000011122222344567889999999999


Q ss_pred             CCC
Q 017977          125 GTP  127 (363)
Q Consensus       125 ~~~  127 (363)
                      +.+
T Consensus        80 ~~~   82 (162)
T d1up7a1          80 RPG   82 (162)
T ss_dssp             CTT
T ss_pred             ccC
Confidence            863

>d1vkza2 c.30.1.1 (A:4-93) Glycinamide ribonucleotide synthetase (GAR-syn), N-domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide synthetase (GAR-syn), N-domain
species: Thermotoga maritima [TaxId: 2336]

Probab=92.76  E-value=0.25  Score=32.37  Aligned_cols=33  Identities=12%  Similarity=0.149  Sum_probs=28.4

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR   84 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   84 (363)
                      |||||+| +|.=-.+|+..|.+..++|+++--++
T Consensus         1 MkVLviG-sGgREHAia~~l~~s~~~v~~~pGN~   33 (90)
T d1vkza2           1 VRVHILG-SGGREHAIGWAFAKQGYEVHFYPGNA   33 (90)
T ss_dssp             CEEEEEE-CSHHHHHHHHHHHHTTCEEEEEECCT
T ss_pred             CEEEEEC-CCHHHHHHHHHHhcCCCeEEEecCCc
Confidence            7999999 68889999999999899999885443

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.57  E-value=0.31  Score=42.24  Aligned_cols=34  Identities=29%  Similarity=0.410  Sum_probs=29.5

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCC-EEEEEeCCCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRS   85 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~   85 (363)
                      .||||+|+ |.+|.++++.|+..|. ++.+++.+.-
T Consensus        38 ~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~V   72 (426)
T d1yovb1          38 CKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTI   72 (426)
T ss_dssp             CCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCBC
T ss_pred             CeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCCc
Confidence            48999996 7899999999999996 8888887653

>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=92.28  E-value=0.0099  Score=47.55  Aligned_cols=27  Identities=37%  Similarity=0.469  Sum_probs=24.1

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEE
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVR   78 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~   78 (363)
                      |||+|+|| |.+|...+.+|+++|++|.
T Consensus         1 mkV~VIGa-Gi~GlstA~~L~~~G~~v~   27 (246)
T d1kifa1           1 MRVVVIGA-GVIGLSTALCIHERYHSVL   27 (246)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHHTTTS
T ss_pred             CEEEEECc-hHHHHHHHHHHHHCCCCce
Confidence            69999995 9999999999999997543

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=92.20  E-value=0.15  Score=37.49  Aligned_cols=37  Identities=24%  Similarity=0.253  Sum_probs=29.9

Q ss_pred             EEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCccccc
Q 017977           52 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI   90 (363)
Q Consensus        52 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~   90 (363)
                      ||.++| .|.+|..+++.|++.|+.+ +..|+.++....
T Consensus         2 kIg~IG-lG~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~   38 (156)
T d2cvza2           2 KVAFIG-LGAMGYPMAGHLARRFPTL-VWNRTFEKALRH   38 (156)
T ss_dssp             CEEEEC-CSTTHHHHHHHHHTTSCEE-EECSSTHHHHHH
T ss_pred             eEEEEe-HHHHHHHHHHHHHhCCCEE-EEeCCHHHHHHH
Confidence            689999 6999999999999998866 567777665443

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=92.17  E-value=0.14  Score=41.73  Aligned_cols=35  Identities=20%  Similarity=0.216  Sum_probs=30.7

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCC
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRS   83 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~   83 (363)
                      ...++|+|-| .|.+|+++++.|.+.|.+|++++-+
T Consensus        34 L~gktvaIqG-fGnVG~~~A~~L~e~Gakvv~vsD~   68 (293)
T d1hwxa1          34 FGDKTFAVQG-FGNVGLHSMRYLHRFGAKCVAVGES   68 (293)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEcc
Confidence            4457999999 5999999999999999999998753

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.91  E-value=0.39  Score=42.88  Aligned_cols=33  Identities=12%  Similarity=0.223  Sum_probs=28.2

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCC-EEEEEeCCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSR   84 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~   84 (363)
                      .+|+|.|+ |.+|..+++.|...|. .+++++.+.
T Consensus        26 s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d~   59 (529)
T d1yova1          26 AHVCLINA-TATGTEILKNLVLPGIGSFTIIDGNQ   59 (529)
T ss_dssp             CEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCSB
T ss_pred             CCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCCc
Confidence            48999996 8899999999999994 788887654

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=91.84  E-value=0.12  Score=35.95  Aligned_cols=35  Identities=20%  Similarity=0.248  Sum_probs=28.9

Q ss_pred             cEEEEecCcchHHHHHHHHHHh---CCCEEEEEeCCCCc
Q 017977           51 MTVSVTGATGFIGRRLVQRLQA---DNHQVRVLTRSRSK   86 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~---~g~~V~~~~r~~~~   86 (363)
                      ++++|+|| |++|-.++..|.+   .|.+|+++.|.+.-
T Consensus        19 ~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~~i   56 (117)
T d1feca2          19 KRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGDMI   56 (117)
T ss_dssp             SEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSSSS
T ss_pred             CeEEEECC-ChHHHHHHHHhHhhcccccccceecccccc
Confidence            68999996 9999999987654   48899999987643

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=91.68  E-value=0.081  Score=43.03  Aligned_cols=33  Identities=21%  Similarity=0.226  Sum_probs=29.8

Q ss_pred             EEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCC
Q 017977           52 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS   85 (363)
Q Consensus        52 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   85 (363)
                      -|+|+|| |..|..++.+|.++|++|.++.+...
T Consensus         5 DvvIIGa-Gi~Gls~A~~La~~G~~V~viE~~~~   37 (281)
T d2gf3a1           5 DVIVVGA-GSMGMAAGYQLAKQGVKTLLVDAFDP   37 (281)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEECSSCS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            3999995 99999999999999999999998643

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=91.58  E-value=0.12  Score=35.89  Aligned_cols=34  Identities=26%  Similarity=0.358  Sum_probs=27.8

Q ss_pred             cEEEEecCcchHHHHHHHHHHh---CCCEEEEEeCCCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQA---DNHQVRVLTRSRS   85 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~---~g~~V~~~~r~~~   85 (363)
                      ++++|.|| |++|-.++..|.+   .|.+|+++.|.+.
T Consensus        21 ~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~~   57 (117)
T d1aoga2          21 RRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGEM   57 (117)
T ss_dssp             SEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSSS
T ss_pred             CeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccch
Confidence            58999996 9999999976654   4578999988653

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.53  E-value=0.13  Score=42.85  Aligned_cols=34  Identities=24%  Similarity=0.295  Sum_probs=30.6

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS   85 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   85 (363)
                      .||+|+|| |.-|-..+.+|.++|++|.++-++..
T Consensus         6 ~kViVIGa-G~aGL~aA~~L~~~G~~V~VlEa~~r   39 (449)
T d2dw4a2           6 GKVIIIGS-GVSGLAAARQLQSFGMDVTLLEARDR   39 (449)
T ss_dssp             CEEEEECC-BHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CcEEEECC-CHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence            48999995 99999999999999999999987653

>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein TT1466
species: Thermus thermophilus [TaxId: 274]

Probab=91.49  E-value=0.25  Score=35.35  Aligned_cols=33  Identities=18%  Similarity=0.168  Sum_probs=28.8

Q ss_pred             cEEEEecCc---chHHHHHHHHHHhCCCEEEEEeCC
Q 017977           51 MTVSVTGAT---GFIGRRLVQRLQADNHQVRVLTRS   83 (363)
Q Consensus        51 ~~vlVtGat---G~iG~~l~~~L~~~g~~V~~~~r~   83 (363)
                      ++|.|+|||   +..|..+++.|.+.||+++.+.-+
T Consensus        14 ksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~~   49 (136)
T d1iuka_          14 KTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPR   49 (136)
T ss_dssp             CEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGG
T ss_pred             CeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEec
Confidence            589999998   679999999999999999877543

>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=91.45  E-value=0.11  Score=38.42  Aligned_cols=31  Identities=26%  Similarity=0.394  Sum_probs=27.0

Q ss_pred             EEEEecCcchHHHHHHHHHHhCCCEEEEEeCCC
Q 017977           52 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR   84 (363)
Q Consensus        52 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   84 (363)
                      ||+|+|| |++|-.++..|.+ +.+|+++.|.+
T Consensus         2 rVvIIGg-G~~G~e~A~~l~~-~~~Vtvv~~~~   32 (167)
T d1xhca1           2 KVVIVGN-GPGGFELAKQLSQ-TYEVTVIDKEP   32 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHTT-TSEEEEECSSS
T ss_pred             eEEEECC-cHHHHHHHHHHHc-CCCEEEEeccc
Confidence            7999995 9999999998864 78999998765

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.21  E-value=0.096  Score=41.44  Aligned_cols=34  Identities=26%  Similarity=0.276  Sum_probs=30.6

Q ss_pred             EEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCc
Q 017977           52 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK   86 (363)
Q Consensus        52 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   86 (363)
                      -|+|+| +|.-|...|.+|.++|++|.++.+++..
T Consensus         7 DviViG-aG~~Gl~~A~~La~~G~~V~vlE~~~~~   40 (297)
T d2bcgg1           7 DVIVLG-TGITECILSGLLSVDGKKVLHIDKQDHY   40 (297)
T ss_dssp             SEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred             CEEEEC-cCHHHHHHHHHHHHCCCCEEEEcCCCCC
Confidence            389999 5999999999999999999999998643

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=91.20  E-value=0.091  Score=39.60  Aligned_cols=34  Identities=18%  Similarity=0.265  Sum_probs=28.4

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS   85 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   85 (363)
                      ++|+|+|| |++|-.++..|.+.|.+|.++.+...
T Consensus         4 ~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~~~~~~   37 (185)
T d1q1ra1           4 DNVVIVGT-GLAGVEVAFGLRASGWEGNIRLVGDA   37 (185)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred             CCEEEECC-cHHHHHHHHHHHHcCCceEEEEecCc
Confidence            58999995 99999999999999987766655443

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=91.20  E-value=0.089  Score=43.36  Aligned_cols=32  Identities=25%  Similarity=0.528  Sum_probs=29.1

Q ss_pred             EEEEecCcchHHHHHHHHHHhCCC-EEEEEeCCC
Q 017977           52 TVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSR   84 (363)
Q Consensus        52 ~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~   84 (363)
                      +|+|+|| |.+|..++.+|.++|+ +|.++.|+.
T Consensus         3 dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           3 RIVIIGA-GIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            6999995 9999999999999996 699999874

>d2vapa1 c.32.1.1 (A:23-231) Cell-division protein FtsZ {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=91.12  E-value=0.3  Score=37.67  Aligned_cols=97  Identities=19%  Similarity=0.207  Sum_probs=59.0

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCC---EEEEEeCCCCcccccCC------CCC--ccccCccccc--------CcchHH
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNH---QVRVLTRSRSKAELIFP------GKK--TRFFPGVMIA--------EEPQWR  111 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~------~~~--~~~~~~~d~~--------~~~~~~  111 (363)
                      .||.|+| -|.-|..++..|.+.|.   +.++++.+.........      ...  .....+.|..        +.+.+.
T Consensus        16 ~ki~ViG-vGGaG~n~v~~l~~~~~~~v~~iainTD~~~L~~~~~~~ki~ig~~~t~g~Gag~~p~~g~~aa~e~~~~I~   94 (209)
T d2vapa1          16 AKITVVG-CGGAGNNTITRLKMEGIEGAKTVAINTDAQQLIRTKADKKILIGKKLTRGLGAGGNPKIGEEAAKESAEEIK   94 (209)
T ss_dssp             CCEEEEE-EHHHHHHHHHHHHHHTCTTEEEEEEESBHHHHHTSCCSEEEECCTTTTTTBCCTTCHHHHHHHHHHTHHHHH
T ss_pred             CcEEEEE-eCChHHHHHHHHHHcCCCceEEEEEeCCHHHHhcCCcchhcccccccccccccccchHHHHHHHHHHHHHHH
Confidence            5899999 69999999999998763   55666654333222110      000  0000111111        456788


Q ss_pred             hhccCCCEEEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCCC
Q 017977          112 DCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVR  163 (363)
Q Consensus       112 ~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~  163 (363)
                      +.++++|.||-+||....             +-..++--+.+.+++  .+..
T Consensus        95 ~~l~~~d~vfi~AGlGGG-------------TGsgaapvia~~ake--~g~l  131 (209)
T d2vapa1          95 AAIQDSDMVFITCGLGGG-------------TGTGSAPVVAEISKK--IGAL  131 (209)
T ss_dssp             HHHTTCSEEEEEEETTSS-------------HHHHHHHHHHHHHHH--TTCE
T ss_pred             HhccCCCEEEEEEeCCCC-------------ccccHHHHHHHHHHH--cCCc
Confidence            889999999999997433             122334467888888  4543

>d1w5fa1 c.32.1.1 (A:22-215) Cell-division protein FtsZ {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Thermotoga maritima [TaxId: 2336]

Probab=91.00  E-value=0.32  Score=37.07  Aligned_cols=96  Identities=17%  Similarity=0.196  Sum_probs=59.7

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCC---CEEEEEeCCCCcccccCCCC------C--ccccCccccc--------CcchHH
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADN---HQVRVLTRSRSKAELIFPGK------K--TRFFPGVMIA--------EEPQWR  111 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~------~--~~~~~~~d~~--------~~~~~~  111 (363)
                      |||.|+| -|.-|..++..|.+.|   -+.++++-+...........      .  .....+.|..        +.+.+.
T Consensus         1 ~kI~viG-vGGaG~n~v~~l~~~~~~~v~~iainTD~~~L~~~~a~~ki~iG~~~t~G~G~g~~p~~g~~aa~e~~~~I~   79 (194)
T d1w5fa1           1 LKIKVIG-VGGAGNNAINRMIEIGIHGVEFVAVNTDLQVLEASNADVKIQIGENITRGLGAGGRPEIGEQAALESEEKIR   79 (194)
T ss_dssp             CCEEEEE-EHHHHHHHHHHHHHHCCTTEEEEEEESCHHHHHTCCCSEEEECCTTTTTTSCCTTCHHHHHHHHHHTHHHHH
T ss_pred             CeEEEEE-eCchHHHHHHHHHHcCCCceEEEEEcCCHHHHhcCCcceEEecccccCCCcccccCchhhHhHHHHHHHHHH
Confidence            5899999 5999999999999866   35566665543322111000      0  0001111221        566788


Q ss_pred             hhccCCCEEEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCC
Q 017977          112 DCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGV  162 (363)
Q Consensus       112 ~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~  162 (363)
                      +.++++|.||-+||....             +-..++--+.+.+++  .+.
T Consensus        80 ~~l~~~d~vfi~AGlGGg-------------TGtgaapviA~~ake--~g~  115 (194)
T d1w5fa1          80 EVLQDTHMVFITAGFGGG-------------TGTGASPVIAKIAKE--MGI  115 (194)
T ss_dssp             HHTTTCSEEEEEEETTSS-------------HHHHHHHHHHHHHHH--TTC
T ss_pred             HHhcCCCeEEEEEecCCC-------------cccchHHHHHHHHHH--cCC
Confidence            889999999999997433             123344568888888  554

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=90.69  E-value=0.15  Score=42.09  Aligned_cols=35  Identities=31%  Similarity=0.428  Sum_probs=31.6

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCc
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK   86 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   86 (363)
                      ..|+|+|| |+.|...+.+|.+.|.+|.++.+.+.-
T Consensus         8 ~dV~IIGA-G~sGl~~a~~L~~~G~~v~i~Ek~~~i   42 (298)
T d1w4xa1           8 VDVLVVGA-GFSGLYALYRLRELGRSVHVIETAGDV   42 (298)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred             CCEEEECc-cHHHHHHHHHHHhCCCCEEEEEcCCCc
Confidence            47999996 999999999999999999999987653

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.63  E-value=0.13  Score=42.26  Aligned_cols=35  Identities=23%  Similarity=0.155  Sum_probs=30.2

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS   85 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   85 (363)
                      -|.+=--.||..|.+|+++|+.+|++|+.+.+..+
T Consensus        37 VR~ItN~SSGk~G~alA~~~~~~Ga~V~li~g~~s   71 (290)
T d1p9oa_          37 VRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARS   71 (290)
T ss_dssp             SEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTS
T ss_pred             ceEeCCCCchHHHHHHHHHHHHcCCEEEEEecCCc
Confidence            46777778999999999999999999999987643

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.61  E-value=0.2  Score=35.92  Aligned_cols=35  Identities=23%  Similarity=0.414  Sum_probs=29.4

Q ss_pred             cEEEEecCcchHHHHHHHHHHh----CCCEEEEEeCCCCc
Q 017977           51 MTVSVTGATGFIGRRLVQRLQA----DNHQVRVLTRSRSK   86 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~----~g~~V~~~~r~~~~   86 (363)
                      ++++|.|| |++|-.++..|.+    .|.+|+.+.+.+..
T Consensus        38 k~i~IvGg-G~~G~E~A~~l~~~~~~~g~~Vt~i~~~~~~   76 (137)
T d1m6ia2          38 KSITIIGG-GFLGSELACALGRKARALGTEVIQLFPEKGN   76 (137)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHHHHHHTCEEEEECSSSST
T ss_pred             CEEEEECC-CHHHHHHHHHHHHHHHhcCCEEEEecccccC
Confidence            58999996 9999999998853    58999999886654

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=90.51  E-value=0.25  Score=36.16  Aligned_cols=36  Identities=19%  Similarity=0.340  Sum_probs=29.6

Q ss_pred             cEEEEe-cCcchHHHHHHHHHHhCCCEEEEEeCCCCc
Q 017977           51 MTVSVT-GATGFIGRRLVQRLQADNHQVRVLTRSRSK   86 (363)
Q Consensus        51 ~~vlVt-GatG~iG~~l~~~L~~~g~~V~~~~r~~~~   86 (363)
                      +.++|. .+.||+|..++..|.+.|++|+++.+.+..
T Consensus        40 ~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~~   76 (156)
T d1djqa2          40 KRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHLA   76 (156)
T ss_dssp             SEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCTT
T ss_pred             CceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcc
Confidence            456665 245999999999999999999999987643

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=90.44  E-value=0.17  Score=37.46  Aligned_cols=66  Identities=18%  Similarity=0.158  Sum_probs=41.1

Q ss_pred             cEEEEecCcchHHHH-HHHHHHhC-CCEEEEEe-CCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           51 MTVSVTGATGFIGRR-LVQRLQAD-NHQVRVLT-RSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        51 ~~vlVtGatG~iG~~-l~~~L~~~-g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      |||.|+| +|.+|+. .+..|.+. +.+++++. +++.........      .++.+  .+.++++++++|+|+-+..
T Consensus         2 iri~iIG-~G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~------~~~~~--~~~~~~l~~~~D~V~I~tp   70 (164)
T d1tlta1           2 LRIGVVG-LGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICES------WRIPY--ADSLSSLAASCDAVFVHSS   70 (164)
T ss_dssp             EEEEEEC-CSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHH------HTCCB--CSSHHHHHTTCSEEEECSC
T ss_pred             CEEEEEc-CCHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhc------ccccc--cccchhhhhhccccccccc
Confidence            6899999 6999975 56666654 67777664 655554433221      11233  3345666788999986553

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=90.06  E-value=0.077  Score=40.35  Aligned_cols=69  Identities=16%  Similarity=0.247  Sum_probs=41.8

Q ss_pred             cEEEEecCcchHHHHHHHHHHhC-CCEEEEE-eCCCCcccccCCCCCccccCcccccCcchHHhhc--cCCCEEEEcc
Q 017977           51 MTVSVTGATGFIGRRLVQRLQAD-NHQVRVL-TRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI--QGSTAVVNLA  124 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~--~~~d~Vi~~a  124 (363)
                      +||.|+| +|.+|+..++.|... +.+|+++ ++++++.........   ... +..-.+++++++  .++|+|+-+.
T Consensus         2 iki~iIG-~G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~~~---~~~-~~~~~~~~~~ll~~~~iD~v~I~t   74 (184)
T d1ydwa1           2 IRIGVMG-CADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANN---YPE-STKIHGSYESLLEDPEIDALYVPL   74 (184)
T ss_dssp             EEEEEES-CCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTT---CCT-TCEEESSHHHHHHCTTCCEEEECC
T ss_pred             eEEEEEc-CCHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhccc---ccc-ceeecCcHHHhhhccccceeeecc
Confidence            6899999 699999999999875 5788866 565544333221100   100 111123455655  3689998554

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=89.59  E-value=0.16  Score=40.58  Aligned_cols=33  Identities=27%  Similarity=0.398  Sum_probs=29.7

Q ss_pred             EEEEecCcchHHHHHHHHHHhCCC-EEEEEeCCCC
Q 017977           52 TVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRS   85 (363)
Q Consensus        52 ~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~   85 (363)
                      +|+|+|| |.-|...+.+|.++|+ +|.++.+++.
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~~V~vlE~~~~   35 (347)
T d1b5qa1           2 RVIVVGA-GMSGISAAKRLSEAGITDLLILEATDH   35 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHHTTCCCEEEECSSSS
T ss_pred             CEEEECC-cHHHHHHHHHHHhCCCCcEEEEECCCC
Confidence            6999995 9999999999999996 7999998764

>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=89.14  E-value=0.076  Score=40.21  Aligned_cols=31  Identities=26%  Similarity=0.267  Sum_probs=25.6

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTR   82 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r   82 (363)
                      .+|+|+|| |++|-.++..|.+.|.+|.++.+
T Consensus         4 a~VvIIGg-G~~G~e~A~~l~~~g~~v~i~~~   34 (183)
T d1d7ya1           4 APVVVLGA-GLASVSFVAELRQAGYQGLITVV   34 (183)
T ss_dssp             SSEEEECC-SHHHHHHHHHHHHHTCCSCEEEE
T ss_pred             CCEEEECc-cHHHHHHHHHHHhcCCceEEEEE
Confidence            36999995 99999999999998876655544

>d2bw0a2 c.65.1.1 (A:1-203) 10-formyltetrahydrofolate dehydrogenase domain 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: 10-formyltetrahydrofolate dehydrogenase domain 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.92  E-value=0.26  Score=37.96  Aligned_cols=33  Identities=21%  Similarity=0.408  Sum_probs=28.4

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR   84 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   84 (363)
                      |||++.| ++..|..+++.|++.||+|.++...+
T Consensus         1 MkI~~~G-~~~~~~~~l~~L~~~~~~i~~V~t~p   33 (203)
T d2bw0a2           1 MKIAVIG-QSLFGQEVYCHLRKEGHEVVGVFTVP   33 (203)
T ss_dssp             CEEEEEC-CHHHHHHHHHHHHHTTCEEEEEEECC
T ss_pred             CEEEEEc-CCHHHHHHHHHHHHCCCcEEEEEcCC
Confidence            7899998 67889999999999999999876443

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=88.51  E-value=0.17  Score=39.66  Aligned_cols=72  Identities=11%  Similarity=0.154  Sum_probs=41.3

Q ss_pred             ccEEEEecCcchHHH-HHHHHHHhC-CCEEEEE-eCCCCcccccCCCCCccccCcccccCcchHHhhcc--CCCEEEEcc
Q 017977           50 QMTVSVTGATGFIGR-RLVQRLQAD-NHQVRVL-TRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLA  124 (363)
Q Consensus        50 ~~~vlVtGatG~iG~-~l~~~L~~~-g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~Vi~~a  124 (363)
                      +-+|.|+| +|.+|+ +++..+... +.+|+++ +|++++.........   .....+...++++++++  ++|+|+-+.
T Consensus        33 ~iriaiIG-~G~~~~~~~~~~~~~~~~~~ivav~d~~~~~a~~~~~~~~---i~~~~~~~~~d~~ell~~~~iD~V~I~t  108 (221)
T d1h6da1          33 RFGYAIVG-LGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYG---VDPRKIYDYSNFDKIAKDPKIDAVYIIL  108 (221)
T ss_dssp             CEEEEEEC-CSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTT---CCGGGEECSSSGGGGGGCTTCCEEEECS
T ss_pred             CEEEEEEc-CcHHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhhc---cccccccccCchhhhcccccceeeeecc
Confidence            34899999 599996 566776654 6777755 565555443221110   11111223344666665  589998654


Q ss_pred             C
Q 017977          125 G  125 (363)
Q Consensus       125 ~  125 (363)
                      .
T Consensus       109 p  109 (221)
T d1h6da1         109 P  109 (221)
T ss_dssp             C
T ss_pred             c
Confidence            3

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=88.08  E-value=0.43  Score=35.26  Aligned_cols=67  Identities=15%  Similarity=0.159  Sum_probs=38.4

Q ss_pred             cEEEEecCcchHHHH-HHHHHHhC-CCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEcc
Q 017977           51 MTVSVTGATGFIGRR-LVQRLQAD-NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA  124 (363)
Q Consensus        51 ~~vlVtGatG~iG~~-l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a  124 (363)
                      |||.|+| +|.+|+. .+..|.+. +.++.++++++...........   ... -+.|.+++.+  .++|+|+-+.
T Consensus         2 irvgiiG-~G~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~---~~~-~~~~~~~ll~--~~iD~V~I~t   70 (167)
T d1xeaa1           2 LKIAMIG-LGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYR---VSA-TCTDYRDVLQ--YGVDAVMIHA   70 (167)
T ss_dssp             EEEEEEC-CCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTT---CCC-CCSSTTGGGG--GCCSEEEECS
T ss_pred             eEEEEEc-CCHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHhcc---ccc-ccccHHHhcc--cccceecccc
Confidence            6999999 5888865 56666654 4677777777655444322111   000 1223333221  3689988554

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=87.81  E-value=0.36  Score=38.22  Aligned_cols=36  Identities=22%  Similarity=0.288  Sum_probs=31.4

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCC
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR   84 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   84 (363)
                      ...++|+|-| -|.+|+++++.|.+.|.+|++++-..
T Consensus        29 l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vsD~~   64 (242)
T d1v9la1          29 IEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVSDIN   64 (242)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEECSS
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEeeccc
Confidence            4567999999 79999999999999999999887543

>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

Probab=87.63  E-value=0.22  Score=42.94  Aligned_cols=32  Identities=25%  Similarity=0.238  Sum_probs=24.3

Q ss_pred             cEEEEec---------CcchHHHHHHHHHHhCCCEEEEEeC
Q 017977           51 MTVSVTG---------ATGFIGRRLVQRLQADNHQVRVLTR   82 (363)
Q Consensus        51 ~~vlVtG---------atG~iG~~l~~~L~~~g~~V~~~~r   82 (363)
                      ||||+++         |-|-.-..|+++|.++||+|++++.
T Consensus         1 MkIl~~~~~~pP~~~GG~~~~~~~La~~L~~~Gh~V~Vvtp   41 (437)
T d2bisa1           1 MKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTP   41 (437)
T ss_dssp             CEEEEECSCCTTCCSSSHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CEEEEECCccCCcccCCHHHHHHHHHHHHHHcCCEEEEEec
Confidence            6777755         4444447789999999999999974

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.53  E-value=0.28  Score=40.86  Aligned_cols=33  Identities=27%  Similarity=0.320  Sum_probs=29.7

Q ss_pred             EEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCc
Q 017977           53 VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK   86 (363)
Q Consensus        53 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   86 (363)
                      |+|+|| |..|...+..|.++|++|.++.++...
T Consensus         2 ViVIGa-G~aGL~aA~~L~~~G~~V~VlE~~~~~   34 (383)
T d2v5za1           2 VVVVGG-GISGMAAAKLLHDSGLNVVVLEARDRV   34 (383)
T ss_dssp             EEEECC-BHHHHHHHHHHHHTTCCEEEEESSSSS
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCEEEEecCCCC
Confidence            899995 999999999999999999999986643

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=86.68  E-value=0.34  Score=38.24  Aligned_cols=34  Identities=21%  Similarity=0.210  Sum_probs=30.6

Q ss_pred             EEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCc
Q 017977           52 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK   86 (363)
Q Consensus        52 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~   86 (363)
                      -|+|+|| |..|...+..|.+.|++|.++.+++..
T Consensus         4 DViIIGa-G~aGl~aA~~la~~G~~V~liEk~~~~   37 (251)
T d2i0za1           4 DVIVIGG-GPSGLMAAIGAAEEGANVLLLDKGNKL   37 (251)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence            3999995 999999999999999999999987654

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=86.46  E-value=1.2  Score=34.88  Aligned_cols=36  Identities=22%  Similarity=0.282  Sum_probs=29.8

Q ss_pred             CCCccEEEEecCcchHHHHHHHHHHh-CCCEEEEEeCC
Q 017977           47 KASQMTVSVTGATGFIGRRLVQRLQA-DNHQVRVLTRS   83 (363)
Q Consensus        47 ~~~~~~vlVtGatG~iG~~l~~~L~~-~g~~V~~~~r~   83 (363)
                      ....++|+|-| .|.+|+++++.|.+ .|.+|++++-.
T Consensus        28 ~l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vsd~   64 (234)
T d1b26a1          28 DPKKATVAVQG-FGNVGQFAALLISQELGSKVVAVSDS   64 (234)
T ss_dssp             CTTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEEET
T ss_pred             CcCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEeecC
Confidence            34567999999 79999999999975 69999988743

>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Polymyxin resistance protein ArnA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=86.40  E-value=0.45  Score=36.52  Aligned_cols=33  Identities=15%  Similarity=0.092  Sum_probs=27.4

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR   84 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   84 (363)
                      |||+|.|. +-.|..+++.|++.|++|.++.-.+
T Consensus         1 Mkiv~~~~-~~~g~~~l~~L~~~g~~I~~Vvt~~   33 (203)
T d2blna2           1 MKTVVFAY-HDMGCLGIEALLAAGYEISAIFTHT   33 (203)
T ss_dssp             CEEEEEEC-HHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred             CeEEEEec-CHHHHHHHHHHHHCCCCEEEEEcCC
Confidence            68999974 6689999999999999998776433

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=86.15  E-value=0.38  Score=38.38  Aligned_cols=36  Identities=17%  Similarity=0.195  Sum_probs=31.3

Q ss_pred             CCCccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCC
Q 017977           47 KASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRS   83 (363)
Q Consensus        47 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~   83 (363)
                      ....++|+|-| .|.+|+++++.|.+.|.+|++++-.
T Consensus        33 ~l~g~~v~IQG-fGnVG~~~a~~L~e~GakvvavsD~   68 (255)
T d1bgva1          33 TLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLSGP   68 (255)
T ss_dssp             CSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEEET
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEecC
Confidence            34567999999 6999999999999999999988643

>d1fmta2 c.65.1.1 (A:1-206) Methionyl-tRNAfmet formyltransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Methionyl-tRNAfmet formyltransferase
species: Escherichia coli [TaxId: 562]

Probab=86.03  E-value=0.64  Score=35.68  Aligned_cols=34  Identities=18%  Similarity=0.213  Sum_probs=28.6

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCCEEEEEeCCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR   84 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   84 (363)
                      .|||+++| ++..+..+++.|++.|++|.++...+
T Consensus         3 ~mKI~f~G-~~~~~~~~L~~L~~~~~~i~~Vit~~   36 (206)
T d1fmta2           3 SLRIIFAG-TPDFAARHLDALLSSGHNVVGVFTQP   36 (206)
T ss_dssp             CCEEEEEE-CSHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred             CcEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEeCC
Confidence            47999998 58899999999999999988776544

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=85.99  E-value=0.97  Score=32.77  Aligned_cols=34  Identities=21%  Similarity=0.082  Sum_probs=29.0

Q ss_pred             ccEEEEecCcchHHHHHHHHHHhCCC-EEEEEeCCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSR   84 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~   84 (363)
                      .++|+|+|| |..|-..+..+++.|. .|+++.|..
T Consensus        45 ~~kVvVIGG-GdtA~D~A~~a~r~GA~~V~vi~rr~   79 (153)
T d1gtea3          45 RGAVIVLGA-GDTAFDCATSALRCGARRVFLVFRKG   79 (153)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred             CCEEEEECC-ChhHHHHHHHHHHcCCcceeEEEeCC
Confidence            458999996 9999999999999985 588888765

>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Streptomyces sp. [TaxId: 1931]

Probab=85.40  E-value=0.37  Score=40.60  Aligned_cols=31  Identities=26%  Similarity=0.250  Sum_probs=28.6

Q ss_pred             EEEEecCcchHHHHHHHHHHhCCCEEEEEeCC
Q 017977           52 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRS   83 (363)
Q Consensus        52 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~   83 (363)
                      -|+|+| +|+-|..++.+|.+.|++|.++-+-
T Consensus         4 ~VIVVG-sG~aG~v~A~rLaeaG~~VlvLEaG   34 (367)
T d1n4wa1           4 PAVVIG-TGYGAAVSALRLGEAGVQTLMLEMG   34 (367)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             eEEEeC-cCHHHHHHHHHHHHCcCeEEEEecC
Confidence            389999 6999999999999999999999884

>d1lc0a1 c.2.1.3 (A:2-128,A:247-291) Biliverdin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Biliverdin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=85.16  E-value=1.2  Score=32.93  Aligned_cols=25  Identities=24%  Similarity=0.377  Sum_probs=20.3

Q ss_pred             CCccEEEEecCcchHHHHHHHHHHhC
Q 017977           48 ASQMTVSVTGATGFIGRRLVQRLQAD   73 (363)
Q Consensus        48 ~~~~~vlVtGatG~iG~~l~~~L~~~   73 (363)
                      ..+++|.|+| +|.+|+..++.|.+.
T Consensus         5 ~~k~kv~iIG-~G~~g~~h~~~l~~~   29 (172)
T d1lc0a1           5 SGKFGVVVVG-VGRAGSVRLRDLKDP   29 (172)
T ss_dssp             CCSEEEEEEC-CSHHHHHHHHHHTSH
T ss_pred             CCCcEEEEEc-CCHHHHHHHHHHHhC
Confidence            3457999999 599999998888753

>d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Ornithine cyclodeaminase
species: Pseudomonas putida [TaxId: 303]

Probab=85.13  E-value=0.32  Score=40.65  Aligned_cols=74  Identities=8%  Similarity=0.176  Sum_probs=54.1

Q ss_pred             ccEEEEecCcchHHHHHHHHHHh-CC-CEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccCC
Q 017977           50 QMTVSVTGATGFIGRRLVQRLQA-DN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT  126 (363)
Q Consensus        50 ~~~vlVtGatG~iG~~l~~~L~~-~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~~  126 (363)
                      .+++.|+| +|..++.-++.+.+ .+ .+|++.+|++.....+.....  ...++++.-.++++++++++|+|+-+.+.
T Consensus       128 a~~l~iiG-~G~QA~~~~~a~~~v~~i~~V~v~~r~~~~~~~~~~~l~--~~~g~~v~~~~s~~eav~~ADIi~t~Tas  203 (340)
T d1x7da_         128 ARKMALIG-NGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLK--EYSGLTIRRASSVAEAVKGVDIITTVTAD  203 (340)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHT--TCTTCEEEECSSHHHHHTTCSEEEECCCC
T ss_pred             CceEEEEc-ccHHHHHHHHHHhhhcceeeeEEEecChHHHHHHHHhhh--hccCCCceecCCHHHHHhcCCceeecccc
Confidence            35899999 69999998988875 45 589999999876544322110  02345666778899999999999976653

>d1ofua1 c.32.1.1 (A:11-208) Cell-division protein FtsZ {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=84.25  E-value=2.2  Score=32.21  Aligned_cols=95  Identities=15%  Similarity=0.207  Sum_probs=59.0

Q ss_pred             EEEEecCcchHHHHHHHHHHhCCC---EEEEEeCCCCcccccCCCCCcc--------ccCccccc--------CcchHHh
Q 017977           52 TVSVTGATGFIGRRLVQRLQADNH---QVRVLTRSRSKAELIFPGKKTR--------FFPGVMIA--------EEPQWRD  112 (363)
Q Consensus        52 ~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~--------~~~~~d~~--------~~~~~~~  112 (363)
                      +|.|+| -|.-|..++..|.+.|.   +.++++-+..............        ...+.|..        +.+.+.+
T Consensus         3 ~IkViG-vGGaG~n~v~~~~~~~~~~v~~iainTD~~~L~~~~~~~ki~iG~~~~~g~G~gg~p~~g~~aa~e~~~~I~~   81 (198)
T d1ofua1           3 VIKVIG-VGGGGGNAVNHMAKNNVEGVEFICANTDAQALKNIAARTVLQLGPGVTKGLGAGANPEVGRQAALEDRERISE   81 (198)
T ss_dssp             CEEEEE-EHHHHHHHHHHHHHTTCCSEEEEEEESBTGGGSSCSCSEEEECCHHHHTTBCCCSCHHHHHHHHHHTHHHHHH
T ss_pred             eEEEEE-ECchHHHHHHHHHHcCCCCeEEEEEeCcHHHHhcCCccceeccccccccCCCCCCChHHHHHHHHHHHHHHHH
Confidence            478888 69999999999998863   6677766554433211110000        00111111        5567888


Q ss_pred             hccCCCEEEEccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhCCCCC
Q 017977          113 CIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGV  162 (363)
Q Consensus       113 ~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~  162 (363)
                      .++++|.||-+||....             +...++--+.+.+++  .+.
T Consensus        82 ~l~~~d~vfi~AGlGGG-------------TGtgaapviA~~ake--~g~  116 (198)
T d1ofua1          82 VLEGADMVFITTGMGGG-------------TGTGAAPIIAEVAKE--MGI  116 (198)
T ss_dssp             HHTTCSEEEEEEETTSS-------------HHHHHHHHHHHHHHH--TTC
T ss_pred             HhCCCCeEEEEecCCCC-------------ccccHHHHHHHHHHH--cCC
Confidence            89999999999997433             122344467888888  554

>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Phenol hydroxylase
species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]

Probab=84.22  E-value=0.46  Score=39.51  Aligned_cols=36  Identities=25%  Similarity=0.370  Sum_probs=30.7

Q ss_pred             EEEEecCcchHHHHHHHHHH-----hCCCEEEEEeCCCCccc
Q 017977           52 TVSVTGATGFIGRRLVQRLQ-----ADNHQVRVLTRSRSKAE   88 (363)
Q Consensus        52 ~vlVtGatG~iG~~l~~~L~-----~~g~~V~~~~r~~~~~~   88 (363)
                      -|+|+|| |-.|..++..|.     +.|++|.++.|.+....
T Consensus         9 DV~IvGa-G~aGl~lA~~La~~~~~~~G~~v~vlEr~~~~~~   49 (360)
T d1pn0a1           9 DVLIVGA-GPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVY   49 (360)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCCC
T ss_pred             CEEEECc-CHHHHHHHHHHHhcccccCCCcEEEEcCCCCCCc
Confidence            4999996 999999999996     47999999999875543

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=84.14  E-value=0.59  Score=38.62  Aligned_cols=33  Identities=30%  Similarity=0.406  Sum_probs=23.6

Q ss_pred             cEEEEec-Cc-chH--HHHHHHHHHhCCCEEEEEeCC
Q 017977           51 MTVSVTG-AT-GFI--GRRLVQRLQADNHQVRVLTRS   83 (363)
Q Consensus        51 ~~vlVtG-at-G~i--G~~l~~~L~~~g~~V~~~~r~   83 (363)
                      |||+|++ || |.+  +.+|+++|.++||+|..++..
T Consensus         1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~   37 (351)
T d1f0ka_           1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTA   37 (351)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence            4677766 44 333  446899999999999887754

>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=83.96  E-value=0.58  Score=36.37  Aligned_cols=34  Identities=21%  Similarity=0.279  Sum_probs=29.7

Q ss_pred             EEEEecCcchHHHHHHHHHHhC--CCEEEEEeCCCCc
Q 017977           52 TVSVTGATGFIGRRLVQRLQAD--NHQVRVLTRSRSK   86 (363)
Q Consensus        52 ~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~   86 (363)
                      ||+|+|| |--|...+.+|.+.  |++|+++.+.+..
T Consensus         3 kv~iIGa-GpaGl~aA~~L~~~~~~~~V~v~e~~~~~   38 (230)
T d1cjca2           3 QICVVGS-GPAGFYTAQHLLKHHSRAHVDIYEKQLVP   38 (230)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHCSSCEEEEECSSSSS
T ss_pred             eEEEECc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCC
Confidence            8999995 99999999999764  7999999887654

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=83.52  E-value=0.46  Score=37.70  Aligned_cols=35  Identities=20%  Similarity=0.222  Sum_probs=31.6

Q ss_pred             EEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCCcc
Q 017977           52 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA   87 (363)
Q Consensus        52 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~   87 (363)
                      .|+|+|| |-.|...+..|.++|++|.++.+.+...
T Consensus         6 DViIIGa-G~aGl~aA~~la~~G~~V~vlEk~~~~G   40 (253)
T d2gqfa1           6 ENIIIGA-GAAGLFCAAQLAKLGKSVTVFDNGKKIG   40 (253)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred             cEEEECc-CHHHHHHHHHHHHCCCcEEEEecCCCCC
Confidence            5999995 9999999999999999999999987554

>d2nvwa1 c.2.1.3 (A:2-154,A:374-457) Galactose/lactose metabolism regulatory protein GAL80 {Yeast (Kluyveromyces lactis) [TaxId: 28985]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Galactose/lactose metabolism regulatory protein GAL80
species: Yeast (Kluyveromyces lactis) [TaxId: 28985]

Probab=82.48  E-value=0.9  Score=35.64  Aligned_cols=74  Identities=11%  Similarity=0.111  Sum_probs=41.3

Q ss_pred             CCCccEEEEecCc---chHHHHHHHHHHh--CCCEEEEE-eCCCCcccccCCCCCccccCcccccCcchHHhhcc--CCC
Q 017977           47 KASQMTVSVTGAT---GFIGRRLVQRLQA--DNHQVRVL-TRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GST  118 (363)
Q Consensus        47 ~~~~~~vlVtGat---G~iG~~l~~~L~~--~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d  118 (363)
                      ...++||.|+|..   |++++.-+..+.+  .+.+|+++ +++............   ..  +....++++++++  ++|
T Consensus        13 ~~k~irvgiIG~G~~~~~~~~~h~~ai~~~~~~~~ivav~d~~~~~~~~~~~~~~---~~--~~~~~~~~~~l~~~~~iD   87 (237)
T d2nvwa1          13 SSRPIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQLQ---LK--HATGFDSLESFAQYKDID   87 (237)
T ss_dssp             GGCCEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHTT---CT--TCEEESCHHHHHHCTTCS
T ss_pred             CCCCeEEEEEecCccccHHHHHHHHHHHhcCCCeEEEEEEcCCHHHHHHHHHhcc---cc--cceeecchhhcccccccc
Confidence            3445799999964   4677766677765  35788865 454444333211100   01  1112345556664  578


Q ss_pred             EEEEccC
Q 017977          119 AVVNLAG  125 (363)
Q Consensus       119 ~Vi~~a~  125 (363)
                      +|+-+..
T Consensus        88 ~V~i~tp   94 (237)
T d2nvwa1          88 MIVVSVK   94 (237)
T ss_dssp             EEEECSC
T ss_pred             eeeccCC
Confidence            8886653

>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Thi4-like
domain: Thiazole biosynthetic enzyme Thi4
species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]

Probab=82.46  E-value=0.65  Score=37.38  Aligned_cols=34  Identities=32%  Similarity=0.401  Sum_probs=30.2

Q ss_pred             EEEEecCcchHHHHHHHHHHhC-CCEEEEEeCCCCc
Q 017977           52 TVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSK   86 (363)
Q Consensus        52 ~vlVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~   86 (363)
                      -|+|+|| |.-|...+..|+++ |++|.++.+.+..
T Consensus        35 DViVIGa-GpaGL~aA~~LA~~~G~~V~vlE~~~~~   69 (278)
T d1rp0a1          35 DVVVVGA-GSAGLSAAYEISKNPNVQVAIIEQSVSP   69 (278)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTSTTSCEEEEESSSSC
T ss_pred             CEEEECC-CHHHHHHHHHHHHccCCeEEEEecCCCC
Confidence            4999996 99999999999874 9999999988754

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=82.41  E-value=0.63  Score=38.01  Aligned_cols=33  Identities=18%  Similarity=0.211  Sum_probs=30.0

Q ss_pred             EEEEecCcchHHHHHHHHHHhCCCEEEEEeCCCC
Q 017977           52 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS   85 (363)
Q Consensus        52 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   85 (363)
                      -|+|+|| |..|...+..|.++|.+|.++.+.+.
T Consensus        18 DVlVIG~-G~aGl~aA~~la~~G~~V~lvEK~~~   50 (308)
T d1y0pa2          18 DVVVVGS-GGAGFSAAISATDSGAKVILIEKEPV   50 (308)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCcEEEEecCCC
Confidence            3999995 99999999999999999999998763

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=81.57  E-value=0.78  Score=35.17  Aligned_cols=31  Identities=13%  Similarity=0.159  Sum_probs=28.4

Q ss_pred             EEEEecCcchHHHHHHHHHHhCCCEEEEEeCC
Q 017977           52 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRS   83 (363)
Q Consensus        52 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~   83 (363)
                      -|+|+|| |+.|...+.++.+.|.+|.++.++
T Consensus         4 DvvVIG~-G~aG~~aA~~a~~~G~kV~iiE~~   34 (217)
T d1gesa1           4 DYIAIGG-GSGGIASINRAAMYGQKCALIEAK   34 (217)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTTTCCEEEEESS
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCEEEEEecc
Confidence            3899996 999999999999999999999874

>d1m6ia1 c.3.1.5 (A:128-263,A:401-477) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.73  E-value=0.73  Score=35.48  Aligned_cols=33  Identities=12%  Similarity=0.255  Sum_probs=27.6

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCCC--EEEEEeCCC
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSR   84 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~   84 (363)
                      ..++|.|| |+.|-.++..|.+.|+  +|+++++.+
T Consensus         5 ~~~vIvG~-G~aG~~~A~~Lr~~~~~~~I~li~~e~   39 (213)
T d1m6ia1           5 VPFLLIGG-GTAAFAAARSIRARDPGARVLIVSEDP   39 (213)
T ss_dssp             EEEEEESC-SHHHHHHHHHHHHHSTTCEEEEEESSS
T ss_pred             CCEEEECC-cHHHHHHHHHHHhcCCCCcEEEEeCCC
Confidence            46899995 9999999999998775  688888754

>d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Ferredoxin:NADP reductase FprA
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=80.52  E-value=0.62  Score=36.21  Aligned_cols=35  Identities=14%  Similarity=0.113  Sum_probs=30.8

Q ss_pred             cEEEEecCcchHHHHHHHHHHhCC-------CEEEEEeCCCCc
Q 017977           51 MTVSVTGATGFIGRRLVQRLQADN-------HQVRVLTRSRSK   86 (363)
Q Consensus        51 ~~vlVtGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~   86 (363)
                      .||+|+| +|--|-..+.+|.++|       ++|.++.+.+..
T Consensus         3 ~~VaVIG-aGpaGL~aA~~L~~~G~~~~~~~~~V~v~E~~~~~   44 (239)
T d1lqta2           3 YYIAIVG-SGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTP   44 (239)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSC
T ss_pred             cEEEEEC-cCHHHHHHHHHHHHcCCccccCCCceEEEecCCCC
Confidence            5899999 5999999999999987       589999987754

>d1vmea1 c.23.5.1 (A:251-398) ROO-like flavoprotein TM0755, C-terminal domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Flavoproteins
family: Flavodoxin-related
domain: ROO-like flavoprotein TM0755, C-terminal domain
species: Thermotoga maritima [TaxId: 2336]

Probab=80.09  E-value=3.4  Score=29.27  Aligned_cols=59  Identities=17%  Similarity=0.066  Sum_probs=41.6

Q ss_pred             cEEEE-----ecCcchHHHHHHHHHHhCCCEEEEEeCCCCcccccCCCCCccccCcccccCcchHHhhccCCCEEEEccC
Q 017977           51 MTVSV-----TGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG  125 (363)
Q Consensus        51 ~~vlV-----tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~Vi~~a~  125 (363)
                      .||+|     +|-|-.+...|++.|.+.|++|.++.-..                 .+..+...+..-+.++|.++..+.
T Consensus         4 ~kv~IiY~S~tGnTe~~A~~i~~~l~~~g~~v~~~~~~~-----------------~~~~~~~~~~~~l~~~d~iiigsp   66 (148)
T d1vmea1           4 GKVTVIYDSMYGFVENVMKKAIDSLKEKGFTPVVYKFSD-----------------EERPAISEILKDIPDSEALIFGVS   66 (148)
T ss_dssp             TEEEEEEECSSSHHHHHHHHHHHHHHHTTCEEEEEEECS-----------------SCCCCHHHHHHHSTTCSEEEEEEC
T ss_pred             CEEEEEEECCCcHHHHHHHHHHHHHHhCCCeEEEEeccc-----------------ccccchhHhhhhHHHCCEeEEEec
Confidence            46666     58888999999999999999988865322                 233333444455778899887665


Q ss_pred             C
Q 017977          126 T  126 (363)
Q Consensus       126 ~  126 (363)
                      .
T Consensus        67 t   67 (148)
T d1vmea1          67 T   67 (148)
T ss_dssp             E
T ss_pred             c
Confidence            4