BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 017982
         (363 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|4F5X|W Chain W, Location Of The Dsrna-dependent Polymerase, Vp1, In
           Rotavirus Particles
          Length = 1089

 Score = 38.9 bits (89), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 3/92 (3%)

Query: 197 PYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRV 256
           PY L  W   +SSIE   SVF HD  + +    +  Y N ++ A+ +   + I V    +
Sbjct: 200 PYYLVTWA--NSSIEMLMSVFSHDDYLIAKELIVLSYSNRSTLAKLVSSPMSILVALVDI 257

Query: 257 KKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDI 288
                T EE+E  F  +  + I V D+ F ++
Sbjct: 258 NGTFITNEELELEFSNKYVRAI-VPDQTFDEL 288


>pdb|2R7Q|A Chain A, Crystal Structure Of Vp1 Apoenzyme Of Rotavirus Sa11 (C-
           Terminal Hexahistidine-Tagged)
 pdb|2R7R|A Chain A, Crystal Structure Of Rotavirus Sa11 Vp1RNA (UGUGACC)
           Complex
 pdb|2R7S|A Chain A, Crystal Structure Of Rotavirus Sa11 Vp1  RNA (UGUGCC)
           Complex
 pdb|2R7T|A Chain A, Crystal Structure Of Rotavirus Sa11 Vp1RNA (UGUGAACC)
           Complex
 pdb|2R7U|A Chain A, Crystal Structure Of Rotavirus Sa11 Vp1RNA (AAAAGCC)
           Complex
 pdb|2R7V|A Chain A, Crystal Structure Of Rotavirus Sa11 Vp1RNA (GGCUUU)
           COMPLEX
 pdb|2R7W|A Chain A, Crystal Structure Of Rotavirus Sa11 Vp1RNA (UGUGACC)MRNA
           5'-Cap (M7gpppg) Complex
 pdb|2R7X|A Chain A, Crystal Structure Of Rotavirus Sa11 Vp1RNA (UGUGACC)GTP
           Complex
 pdb|2R7X|B Chain B, Crystal Structure Of Rotavirus Sa11 Vp1RNA (UGUGACC)GTP
           Complex
          Length = 1095

 Score = 38.9 bits (89), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 3/92 (3%)

Query: 197 PYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRV 256
           PY L  W   +SSIE   SVF HD  + +    +  Y N ++ A+ +   + I V    +
Sbjct: 200 PYYLVTWA--NSSIEMLMSVFSHDDYLIAKELIVLSYSNRSTLAKLVSSPMSILVALVDI 257

Query: 257 KKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDI 288
                T EE+E  F  +  + I V D+ F ++
Sbjct: 258 NGTFITNEELELEFSNKYVRAI-VPDQTFDEL 288


>pdb|2R7O|A Chain A, Crystal Structure Of Vp1 Apoenzyme Of Rotavirus Sa11 (N-
           Terminal Hexahistidine-Tagged)
 pdb|4AU6|A Chain A, Location Of The Dsrna-dependent Polymerase, Vp1, In
           Rotavirus Particles
 pdb|4AU6|B Chain B, Location Of The Dsrna-dependent Polymerase, Vp1, In
           Rotavirus Particles
 pdb|4AU6|C Chain C, Location Of The Dsrna-dependent Polymerase, Vp1, In
           Rotavirus Particles
 pdb|4AU6|D Chain D, Location Of The Dsrna-dependent Polymerase, Vp1, In
           Rotavirus Particles
 pdb|4AU6|E Chain E, Location Of The Dsrna-dependent Polymerase, Vp1, In
           Rotavirus Particles
          Length = 1095

 Score = 38.9 bits (89), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 3/92 (3%)

Query: 197 PYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRV 256
           PY L  W   +SSIE   SVF HD  + +    +  Y N ++ A+ +   + I V    +
Sbjct: 206 PYYLVTWA--NSSIEMLMSVFSHDDYLIAKELIVLSYSNRSTLAKLVSSPMSILVALVDI 263

Query: 257 KKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDI 288
                T EE+E  F  +  + I V D+ F ++
Sbjct: 264 NGTFITNEELELEFSNKYVRAI-VPDQTFDEL 294


>pdb|2CFS|A Chain A, Crystal Structure Of Human Pyridoxal 5'-Phosphate
           Phosphatase
 pdb|2CFT|A Chain A, Crystal Structure Of Human Pyridoxal 5'-Phosphate
           Phosphatase With Its Substrate
          Length = 298

 Score = 37.7 bits (86), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 17/38 (44%), Positives = 26/38 (68%)

Query: 264 EEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILT 301
           E I ++F    ++ +MVGDR  TDI++G+R G  T+LT
Sbjct: 222 ECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLT 259


>pdb|1YDF|A Chain A, Crystal Structure Of A Had-like Phosphatase From
           Streptococcus Pneumoniae
          Length = 257

 Score = 36.2 bits (82), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 1/43 (2%)

Query: 268 KHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTIL-TEPLSLAEE 309
           +H G +  +LIMVGD   TDI  G  NG  T+L T   + AEE
Sbjct: 192 EHLGLEREELIMVGDNYLTDIRAGIDNGIPTLLVTTGFTKAEE 234


>pdb|2OYC|A Chain A, Crystal Structure Of Human Pyridoxal Phosphate Phosphatase
 pdb|2P27|A Chain A, Crystal Structure Of Human Pyridoxal Phosphate Phosphatase
           With Mg2+ At 1.9 A Resolution
 pdb|2P69|A Chain A, Crystal Structure Of Human Pyridoxal Phosphate Phosphatase
           With Plp
          Length = 306

 Score = 34.7 bits (78), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 16/38 (42%), Positives = 25/38 (65%)

Query: 264 EEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILT 301
           E I ++F    ++ + VGDR  TDI++G+R G  T+LT
Sbjct: 222 ECITENFSIDPARTLXVGDRLETDILFGHRCGXTTVLT 259


>pdb|2CFR|A Chain A, Crystal Structure Of Human Pyridoxal 5'-Phosphate
           Phosphatase
          Length = 298

 Score = 34.7 bits (78), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 16/38 (42%), Positives = 25/38 (65%)

Query: 264 EEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILT 301
           E I ++F    ++ + VGDR  TDI++G+R G  T+LT
Sbjct: 222 ECITENFSIDPARTLXVGDRLETDILFGHRCGXTTVLT 259


>pdb|1YS9|A Chain A, Crystal Sructure Of Phosphatase Spy1043 From Streptococcus
           Pyogenes
          Length = 254

 Score = 33.1 bits (74), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 15/31 (48%), Positives = 19/31 (61%)

Query: 270 FGCQSSQLIMVGDRPFTDIVYGNRNGFLTIL 300
            G Q S+ +MVGD   TDI+ G +N   TIL
Sbjct: 194 LGIQRSEAVMVGDNYLTDIMAGIQNDIATIL 224


>pdb|1YV9|A Chain A, Crystal Structure Of A Had-Like Phosphatase From
           Enterococcus Faecalis V583
 pdb|1YV9|B Chain B, Crystal Structure Of A Had-Like Phosphatase From
           Enterococcus Faecalis V583
          Length = 264

 Score = 32.7 bits (73), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 15/32 (46%), Positives = 20/32 (62%)

Query: 269 HFGCQSSQLIMVGDRPFTDIVYGNRNGFLTIL 300
           H G +  Q+IMVGD   TDI  G +NG  ++L
Sbjct: 195 HLGVEKEQVIMVGDNYETDIQSGIQNGIDSLL 226


>pdb|1E44|B Chain B, Ribonuclease Domain Of Colicin E3 In Complex With Its
           Immunity Protein
          Length = 96

 Score = 30.8 bits (68), Expect = 1.3,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 2/65 (3%)

Query: 58  PTANSFSKEQEENLRKDNKLHP-DQNHTFLDQFYSSADTNKLGNQDPESQNQEQDEEPRY 116
           P  N   K +     K  K++  D  H  L+  Y ++D   LG+ DP++ NQ +  +P+ 
Sbjct: 32  PKQNGGGKRKRWTGDKGRKIYEWDSQHGELEG-YRASDGQHLGSFDPKTGNQLKGPDPKR 90

Query: 117 NKDKY 121
           N  KY
Sbjct: 91  NIKKY 95


>pdb|1VJR|A Chain A, Crystal Structure Of 4-nitrophenylphosphatase (tm1742)
           From Thermotoga Maritima At 2.40 A Resolution
          Length = 271

 Score = 30.4 bits (67), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 13/36 (36%), Positives = 19/36 (52%)

Query: 266 IEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILT 301
           I + FG    +   VGDR +TD+  G   G ++IL 
Sbjct: 204 ISEKFGVPKERXAXVGDRLYTDVKLGKNAGIVSILV 239


>pdb|2XJE|A Chain A, Crystal Structure Of The D52n Variant Of Cytosolic
           5'-Nucleotidase Ii In Complex With Uridine
           5'-Monophosphate And Adenosine Triphosphate
          Length = 555

 Score = 30.4 bits (67), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 2/73 (2%)

Query: 238 SKARKLEGKIGIKVIRHRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYG-NRNGF 296
           +K  KL+       ++H +    G+++ I    G +   ++ +GD  F DI+    R G+
Sbjct: 326 TKTGKLKIGTYTGPLQHGIVYSGGSSDTICDLLGAKGKDILYIGDHIFGDILKSKKRQGW 385

Query: 297 LTILTEPLSLAEE 309
            T L  P  LA+E
Sbjct: 386 RTFLVIP-ELAQE 397


>pdb|2XCV|A Chain A, Crystal Structure Of The D52n Variant Of Cytosolic 5'-
           Nucleotidase Ii In Complex With Inosine Monophosphate
           And 2,3-Bisphosphoglycerate
 pdb|2XCW|A Chain A, Crystal Structure Of The D52n Variant Of Cytosolic
           5'-Nucleotidase Ii In Complex With Inosine Monophosphate
           And Atp
 pdb|2XCX|A Chain A, Crystal Structure Of The Apoform Of The D52n Variant Of
           Cytosolic 5'- Nucleotidase Ii
 pdb|2XJB|A Chain A, Crystal Structure Of The D52n Variant Of Cytosolic
           5'-Nucleotidase Ii In Complex With Deoxyguanosine
           Monophosphate And Deoxyadenosine Triphosphate
 pdb|2XJC|A Chain A, Crystal Structure Of The D52n Variant Of Cytosolic
           5'-Nucleotidase Ii In Complex With Guanosine
           Monophosphate And Diadenosine Tetraphosphate
 pdb|2XJD|A Chain A, Crystal Structure Of The D52n Variant Of Cytosolic 5'-
           Nucleotidase Ii In Complex With Inorganic Phosphate And
           Deoxyadenosine Triphosphate
          Length = 554

 Score = 30.4 bits (67), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 2/73 (2%)

Query: 238 SKARKLEGKIGIKVIRHRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYG-NRNGF 296
           +K  KL+       ++H +    G+++ I    G +   ++ +GD  F DI+    R G+
Sbjct: 325 TKTGKLKIGTYTGPLQHGIVYSGGSSDTICDLLGAKGKDILYIGDHIFGDILKSKKRQGW 384

Query: 297 LTILTEPLSLAEE 309
            T L  P  LA+E
Sbjct: 385 RTFLVIP-ELAQE 396


>pdb|2J2C|A Chain A, Crystal Structure Of Human Cytosolic 5'-Nucleotidase Ii
           (Nt5c2, Cn-Ii)
 pdb|2JC9|A Chain A, Crystal Structure Of Human Cytosolic 5'-Nucleotidase Ii In
           Complex With Adenosine
 pdb|4H4B|A Chain A, Human Cytosolic 5'-nucleotidase Ii In Complex With
           Anthraquinone-2,6- Disulfonic Acid
          Length = 555

 Score = 30.4 bits (67), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 2/73 (2%)

Query: 238 SKARKLEGKIGIKVIRHRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYG-NRNGF 296
           +K  KL+       ++H +    G+++ I    G +   ++ +GD  F DI+    R G+
Sbjct: 326 TKTGKLKIGTYTGPLQHGIVYSGGSSDTICDLLGAKGKDILYIGDHIFGDILKSKKRQGW 385

Query: 297 LTILTEPLSLAEE 309
            T L  P  LA+E
Sbjct: 386 RTFLVIP-ELAQE 397


>pdb|2JCM|A Chain A, Crystal Structure Of Human Cytosolic 5'-Nucleotidase Ii In
           Complex With Beryllium Trifluoride
 pdb|2XJF|A Chain A, Crystal Structure Of The D52n Variant Of Cytosolic 5'-
           Nucleotidase Ii With A Covalently Modified Asn52
          Length = 555

 Score = 30.4 bits (67), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 2/73 (2%)

Query: 238 SKARKLEGKIGIKVIRHRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYG-NRNGF 296
           +K  KL+       ++H +    G+++ I    G +   ++ +GD  F DI+    R G+
Sbjct: 326 TKTGKLKIGTYTGPLQHGIVYSGGSSDTICDLLGAKGKDILYIGDHIFGDILKSKKRQGW 385

Query: 297 LTILTEPLSLAEE 309
            T L  P  LA+E
Sbjct: 386 RTFLVIP-ELAQE 397


>pdb|1PW5|A Chain A, Putative Nagd Protein
          Length = 253

 Score = 30.0 bits (66), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 13/36 (36%), Positives = 19/36 (52%)

Query: 266 IEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILT 301
           I + FG    +   VGDR +TD+  G   G ++IL 
Sbjct: 192 ISEKFGVPKERXAXVGDRLYTDVKLGKNAGIVSILV 227


>pdb|2VH4|A Chain A, Structure Of A Loop C-sheet Serpin Polymer
 pdb|2VH4|B Chain B, Structure Of A Loop C-sheet Serpin Polymer
          Length = 381

 Score = 29.6 bits (65), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 6/64 (9%)

Query: 176 AELQRRGFKGVVFDKDNTLTAPYS------LTLWGPLSSSIEQCKSVFGHDIAVFSNSAG 229
           A+     FK  + DK+N+L +P S      +T  G  + ++ Q +   G DI++   +  
Sbjct: 22  ADFSIELFKNSIDDKENSLISPLSAMLALAMTANGADNETLAQMEKALGKDISIEDLNKY 81

Query: 230 LYEY 233
           LY Y
Sbjct: 82  LYTY 85


>pdb|2PEE|A Chain A, Crystal Structure Of A Thermophilic Serpin, Tengpin, In
           The Native State
 pdb|2PEE|B Chain B, Crystal Structure Of A Thermophilic Serpin, Tengpin, In
           The Native State
          Length = 387

 Score = 29.6 bits (65), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 6/64 (9%)

Query: 176 AELQRRGFKGVVFDKDNTLTAPYS------LTLWGPLSSSIEQCKSVFGHDIAVFSNSAG 229
           A+     FK  + DK+N+L +P S      +T  G  + ++ Q +   G DI++   +  
Sbjct: 29  ADFSIELFKNSIDDKENSLISPLSAMLALAMTANGADNETLAQMEKALGKDISIEDLNKY 88

Query: 230 LYEY 233
           LY Y
Sbjct: 89  LYTY 92


>pdb|2XFZ|Y Chain Y, Structure Of Cytotoxic Domain Of Colicin E3 Bound To The
           70s Ribosome (Part 1 Of 4)
 pdb|2XG1|Y Chain Y, Structure Of Cytotoxic Domain Of Colicin E3 Bound To The
           70s Ribosome (Part 3 Of 4)
          Length = 97

 Score = 29.6 bits (65), Expect = 3.0,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 30/64 (46%)

Query: 58  PTANSFSKEQEENLRKDNKLHPDQNHTFLDQFYSSADTNKLGNQDPESQNQEQDEEPRYN 117
           P  N   K +     K  K++   +     + Y ++D   LG+ DP++ NQ +  +P+ N
Sbjct: 33  PKQNGGGKRKRWTGDKGRKIYEWDSQAGELEGYRASDGQHLGSFDPKTGNQLKGPDPKRN 92

Query: 118 KDKY 121
             KY
Sbjct: 93  IKKY 96


>pdb|2PEF|A Chain A, Crystal Structure Of A Thermophilic Serpin, Tengpin, In
           The Latent State
          Length = 373

 Score = 29.3 bits (64), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 6/64 (9%)

Query: 176 AELQRRGFKGVVFDKDNTLTAPYS------LTLWGPLSSSIEQCKSVFGHDIAVFSNSAG 229
           A+     FK  + DK+N+L +P S      +T  G  + ++ Q +   G DI++   +  
Sbjct: 14  ADFSIELFKNSIDDKENSLISPLSAMLALAMTANGADNETLAQMEKALGKDISIEDLNKY 73

Query: 230 LYEY 233
           LY Y
Sbjct: 74  LYTY 77


>pdb|3KE2|A Chain A, Crystal Structure Of A Duf2131 Family Protein (Sama_2911)
           From Shewanella Amazonensis Sb2b At 2.50 A Resolution
 pdb|3KE2|B Chain B, Crystal Structure Of A Duf2131 Family Protein (Sama_2911)
           From Shewanella Amazonensis Sb2b At 2.50 A Resolution
 pdb|3KE2|C Chain C, Crystal Structure Of A Duf2131 Family Protein (Sama_2911)
           From Shewanella Amazonensis Sb2b At 2.50 A Resolution
          Length = 117

 Score = 28.9 bits (63), Expect = 4.8,   Method: Composition-based stats.
 Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 5/37 (13%)

Query: 198 YSLTLWGPLSSS-----IEQCKSVFGHDIAVFSNSAG 229
           Y +  WGP+SS+     +++ KS+ G D AV   +AG
Sbjct: 78  YRIRTWGPISSAWXDTHVDEVKSLLGVDDAVGQATAG 114


>pdb|2B5U|A Chain A, Crystal Structure Of Colicin E3 V206c Mutant In Complex
           With Its Immunity Protein
 pdb|2B5U|C Chain C, Crystal Structure Of Colicin E3 V206c Mutant In Complex
           With Its Immunity Protein
          Length = 551

 Score = 28.1 bits (61), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 2/65 (3%)

Query: 58  PTANSFSKEQEENLRKDNKLHP-DQNHTFLDQFYSSADTNKLGNQDPESQNQEQDEEPRY 116
           P  N   K +     K  K++  D  H  L + Y ++D   LG+ DP++ NQ +  +P+ 
Sbjct: 487 PKQNGGGKRKRWTGDKGRKIYEWDSQHGEL-EGYRASDGQHLGSFDPKTGNQLKGPDPKR 545

Query: 117 NKDKY 121
           N  KY
Sbjct: 546 NIKKY 550


>pdb|1JCH|A Chain A, Crystal Structure Of Colicin E3 In Complex With Its
           Immunity Protein
 pdb|1JCH|C Chain C, Crystal Structure Of Colicin E3 In Complex With Its
           Immunity Protein
          Length = 551

 Score = 28.1 bits (61), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 2/65 (3%)

Query: 58  PTANSFSKEQEENLRKDNKLHP-DQNHTFLDQFYSSADTNKLGNQDPESQNQEQDEEPRY 116
           P  N   K +     K  K++  D  H  L + Y ++D   LG+ DP++ NQ +  +P+ 
Sbjct: 487 PKQNGGGKRKRWTGDKGRKIYEWDSQHGEL-EGYRASDGQHLGSFDPKTGNQLKGPDPKR 545

Query: 117 NKDKY 121
           N  KY
Sbjct: 546 NIKKY 550


>pdb|2CAU|A Chain A, Canavalin From Jack Bean
 pdb|2CAV|A Chain A, Canavalin From Jack Bean
          Length = 445

 Score = 27.7 bits (60), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 4/50 (8%)

Query: 256 VKKPAGTAEEIEKHFGCQSSQLIMVGDRPFT----DIVYGNRNGFLTILT 301
           VK P    +EI KH    S + +   D+PF     D +Y N  G L  +T
Sbjct: 220 VKMPKDQIQEISKHAQSSSRKTLSSQDKPFNLRSRDPIYSNNYGKLYEIT 269


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.319    0.135    0.417 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,221,905
Number of Sequences: 62578
Number of extensions: 420222
Number of successful extensions: 885
Number of sequences better than 100.0: 26
Number of HSP's better than 100.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 870
Number of HSP's gapped (non-prelim): 26
length of query: 363
length of database: 14,973,337
effective HSP length: 100
effective length of query: 263
effective length of database: 8,715,537
effective search space: 2292186231
effective search space used: 2292186231
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)