Query 017982
Match_columns 363
No_of_seqs 353 out of 2177
Neff 5.4
Searched_HMMs 46136
Date Fri Mar 29 05:07:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017982.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017982hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG2179 Predicted hydrolase of 100.0 2.3E-37 5E-42 276.1 15.3 168 159-337 4-173 (175)
2 PF09419 PGP_phosphatase: Mito 100.0 2.9E-34 6.4E-39 258.5 14.7 158 145-305 2-167 (168)
3 KOG2961 Predicted hydrolase (H 100.0 1.2E-31 2.5E-36 236.5 16.0 184 140-324 1-189 (190)
4 TIGR01668 YqeG_hyp_ppase HAD s 99.9 4.2E-26 9.1E-31 204.3 18.2 166 160-334 2-168 (170)
5 KOG2882 p-Nitrophenyl phosphat 99.8 8.1E-19 1.8E-23 169.6 11.0 171 113-309 99-276 (306)
6 PRK06769 hypothetical protein; 99.7 8.4E-18 1.8E-22 151.0 11.7 123 181-305 2-140 (173)
7 TIGR01662 HAD-SF-IIIA HAD-supe 99.7 1E-17 2.2E-22 142.3 11.4 119 184-303 1-132 (132)
8 TIGR01656 Histidinol-ppas hist 99.7 1.7E-16 3.6E-21 138.5 11.9 118 184-303 1-146 (147)
9 TIGR00213 GmhB_yaeD D,D-heptos 99.7 6.7E-16 1.5E-20 138.3 12.3 120 184-305 2-154 (176)
10 TIGR01664 DNA-3'-Pase DNA 3'-p 99.6 3E-15 6.6E-20 134.2 11.2 118 182-300 12-160 (166)
11 PRK08942 D,D-heptose 1,7-bisph 99.6 3.9E-15 8.5E-20 133.6 11.2 122 182-305 2-150 (181)
12 COG0647 NagD Predicted sugar p 99.6 1E-14 2.2E-19 140.7 12.4 146 121-310 92-243 (269)
13 TIGR01261 hisB_Nterm histidino 99.6 9.5E-15 2.1E-19 130.6 11.1 122 184-307 2-152 (161)
14 COG0241 HisB Histidinol phosph 99.5 9.4E-14 2E-18 126.9 12.7 123 183-307 5-154 (181)
15 TIGR01452 PGP_euk phosphoglyco 99.5 1.3E-13 2.7E-18 132.4 13.5 116 181-307 130-252 (279)
16 PRK05446 imidazole glycerol-ph 99.5 4.6E-13 1E-17 133.8 14.3 121 183-305 2-151 (354)
17 TIGR01428 HAD_type_II 2-haloal 99.5 2.3E-13 5.1E-18 122.7 10.3 98 198-305 89-195 (198)
18 PLN02575 haloacid dehalogenase 99.4 1.5E-12 3.2E-17 131.2 14.4 93 202-304 217-318 (381)
19 COG1011 Predicted hydrolase (H 99.4 7.1E-13 1.5E-17 120.9 10.3 96 200-305 98-202 (229)
20 TIGR02253 CTE7 HAD superfamily 99.4 9.2E-13 2E-17 120.2 10.2 97 200-305 93-198 (221)
21 PLN02645 phosphoglycolate phos 99.4 2.4E-12 5.2E-17 125.8 13.4 162 118-307 110-280 (311)
22 KOG3085 Predicted hydrolase (H 99.4 7E-13 1.5E-17 125.8 9.1 96 199-304 111-215 (237)
23 TIGR01685 MDP-1 magnesium-depe 99.4 9.1E-13 2E-17 119.7 8.9 107 201-321 45-171 (174)
24 TIGR02252 DREG-2 REG-2-like, H 99.4 8.2E-13 1.8E-17 119.4 8.5 91 200-300 104-203 (203)
25 TIGR01457 HAD-SF-IIA-hyp2 HAD- 99.4 6.1E-12 1.3E-16 119.2 14.7 127 176-307 96-228 (249)
26 PTZ00445 p36-lilke protein; Pr 99.4 2.9E-12 6.2E-17 119.6 11.2 127 176-304 36-207 (219)
27 cd01427 HAD_like Haloacid deha 99.4 3.5E-12 7.7E-17 104.3 10.6 107 185-301 1-139 (139)
28 PF13419 HAD_2: Haloacid dehal 99.4 3.1E-12 6.7E-17 109.8 10.2 93 199-301 75-176 (176)
29 TIGR01670 YrbI-phosphatas 3-de 99.4 4.1E-12 8.9E-17 112.2 11.1 108 183-304 1-120 (154)
30 PRK09484 3-deoxy-D-manno-octul 99.4 3.1E-12 6.6E-17 116.0 9.7 112 179-302 17-138 (183)
31 PLN02770 haloacid dehalogenase 99.3 3.3E-12 7.1E-17 120.5 9.9 97 199-305 106-211 (248)
32 PLN02940 riboflavin kinase 99.3 3.9E-12 8.5E-17 128.0 10.8 94 201-304 93-196 (382)
33 PRK11587 putative phosphatase; 99.3 4.7E-12 1E-16 116.5 10.3 96 199-304 81-184 (218)
34 PRK10826 2-deoxyglucose-6-phos 99.3 4.7E-12 1E-16 116.5 10.2 99 199-307 90-197 (222)
35 TIGR01422 phosphonatase phosph 99.3 4.8E-12 1E-16 118.8 9.7 97 199-305 97-204 (253)
36 TIGR01454 AHBA_synth_RP 3-amin 99.3 7.6E-12 1.7E-16 113.6 10.5 97 199-305 73-178 (205)
37 COG0546 Gph Predicted phosphat 99.3 8.1E-12 1.8E-16 115.8 10.5 95 201-305 89-192 (220)
38 TIGR01449 PGP_bact 2-phosphogl 99.3 9.7E-12 2.1E-16 112.6 10.4 96 200-305 84-188 (213)
39 TIGR03351 PhnX-like phosphonat 99.3 9E-12 2E-16 114.0 10.2 96 200-305 86-194 (220)
40 PLN03243 haloacid dehalogenase 99.3 7.9E-12 1.7E-16 119.6 9.8 94 200-303 108-210 (260)
41 PRK09449 dUMP phosphatase; Pro 99.3 9.1E-12 2E-16 114.2 9.8 95 200-304 94-198 (224)
42 TIGR01509 HAD-SF-IA-v3 haloaci 99.3 1.4E-11 3E-16 108.3 10.5 91 200-301 84-183 (183)
43 PRK10444 UMP phosphatase; Prov 99.3 2.3E-11 5E-16 115.7 12.8 112 184-307 110-224 (248)
44 PRK13288 pyrophosphatase PpaX; 99.3 1.2E-11 2.6E-16 113.0 10.4 96 200-305 81-185 (214)
45 COG0637 Predicted phosphatase/ 99.3 1.3E-11 2.9E-16 115.0 10.8 94 201-304 86-188 (221)
46 TIGR01990 bPGM beta-phosphoglu 99.3 5.5E-12 1.2E-16 111.7 7.7 90 201-302 87-185 (185)
47 PRK13226 phosphoglycolate phos 99.3 1.1E-11 2.4E-16 115.4 9.6 95 200-304 94-197 (229)
48 PRK09456 ?-D-glucose-1-phospha 99.3 2E-11 4.4E-16 110.8 10.7 94 201-304 84-187 (199)
49 TIGR01681 HAD-SF-IIIC HAD-supe 99.3 2E-11 4.4E-16 104.7 9.4 101 184-293 1-126 (128)
50 TIGR02254 YjjG/YfnB HAD superf 99.3 2E-11 4.4E-16 111.0 9.9 96 200-305 96-201 (224)
51 PRK10748 flavin mononucleotide 99.3 1.4E-11 3.1E-16 115.4 8.4 91 200-305 112-211 (238)
52 PF08645 PNK3P: Polynucleotide 99.3 2.1E-11 4.5E-16 108.9 8.8 113 184-297 1-151 (159)
53 TIGR01458 HAD-SF-IIA-hyp3 HAD- 99.2 7.3E-11 1.6E-15 112.5 13.0 112 184-305 109-227 (257)
54 PHA02530 pseT polynucleotide k 99.2 5.7E-11 1.2E-15 114.1 11.8 112 183-304 158-298 (300)
55 PRK14988 GMP/IMP nucleotidase; 99.2 3.3E-11 7.1E-16 112.3 9.8 96 198-303 90-195 (224)
56 TIGR02009 PGMB-YQAB-SF beta-ph 99.2 2.2E-11 4.7E-16 107.8 8.0 90 200-301 87-185 (185)
57 PRK13478 phosphonoacetaldehyde 99.2 4.2E-11 9E-16 113.8 10.4 96 200-305 100-206 (267)
58 TIGR02247 HAD-1A3-hyp Epoxide 99.2 5.1E-11 1.1E-15 108.5 10.3 98 199-304 92-198 (211)
59 TIGR02726 phenyl_P_delta pheny 99.2 6.6E-11 1.4E-15 107.0 10.3 106 182-300 6-123 (169)
60 PF13242 Hydrolase_like: HAD-h 99.2 2.9E-11 6.2E-16 94.3 6.3 54 256-309 2-56 (75)
61 PLN02779 haloacid dehalogenase 99.2 8.4E-11 1.8E-15 113.8 10.9 96 200-305 143-249 (286)
62 TIGR01686 FkbH FkbH-like domai 99.2 8.9E-11 1.9E-15 115.1 10.8 105 182-296 2-124 (320)
63 TIGR00338 serB phosphoserine p 99.2 1.4E-10 3E-15 106.1 11.2 88 202-299 86-192 (219)
64 TIGR01993 Pyr-5-nucltdase pyri 99.2 7.5E-11 1.6E-15 105.4 8.2 89 200-301 83-184 (184)
65 TIGR01691 enolase-ppase 2,3-di 99.2 1.9E-10 4.2E-15 107.9 11.1 94 200-303 94-197 (220)
66 PRK13222 phosphoglycolate phos 99.1 2.9E-10 6.3E-15 103.7 10.9 97 199-305 91-196 (226)
67 PLN02811 hydrolase 99.1 2.9E-10 6.4E-15 104.9 10.9 98 199-305 76-187 (220)
68 PRK13223 phosphoglycolate phos 99.1 2.1E-10 4.6E-15 110.1 10.2 95 200-304 100-203 (272)
69 PRK10563 6-phosphogluconate ph 99.1 1.8E-10 4E-15 105.6 9.2 91 199-302 86-186 (221)
70 TIGR01663 PNK-3'Pase polynucle 99.1 2.3E-10 4.9E-15 119.8 10.6 113 182-296 167-305 (526)
71 PRK10725 fructose-1-P/6-phosph 99.1 2.8E-10 6E-15 101.3 8.9 90 201-302 88-186 (188)
72 TIGR01460 HAD-SF-IIA Haloacid 99.1 1.5E-09 3.3E-14 102.1 13.6 110 183-303 118-235 (236)
73 smart00577 CPDc catalytic doma 99.1 2.1E-10 4.5E-15 100.6 7.1 101 184-297 3-137 (148)
74 PRK13225 phosphoglycolate phos 99.1 7.4E-10 1.6E-14 106.9 11.3 98 199-306 140-243 (273)
75 KOG3040 Predicted sugar phosph 99.0 2.1E-09 4.5E-14 100.3 10.9 50 256-305 179-229 (262)
76 TIGR01459 HAD-SF-IIA-hyp4 HAD- 99.0 2E-09 4.3E-14 101.1 10.8 96 203-303 140-242 (242)
77 TIGR01672 AphA HAD superfamily 99.0 3.4E-09 7.3E-14 100.8 11.9 87 205-303 118-212 (237)
78 TIGR01456 CECR5 HAD-superfamil 99.0 3.8E-09 8.2E-14 103.9 11.5 119 182-307 146-296 (321)
79 PRK11009 aphA acid phosphatase 99.0 8.5E-09 1.8E-13 98.1 13.4 92 202-305 115-214 (237)
80 PLN02919 haloacid dehalogenase 98.9 2.2E-09 4.8E-14 120.5 9.9 95 201-305 161-265 (1057)
81 PLN02954 phosphoserine phospha 98.9 1E-08 2.2E-13 94.1 11.9 91 201-303 84-197 (224)
82 TIGR01548 HAD-SF-IA-hyp1 haloa 98.9 4.6E-09 9.9E-14 95.1 8.2 83 202-294 107-197 (197)
83 PHA02597 30.2 hypothetical pro 98.9 1E-08 2.2E-13 92.5 10.1 94 200-306 73-178 (197)
84 TIGR01549 HAD-SF-IA-v1 haloaci 98.9 6.5E-09 1.4E-13 89.8 8.2 83 201-295 64-154 (154)
85 PRK06698 bifunctional 5'-methy 98.9 1.1E-08 2.5E-13 104.9 10.5 94 200-305 329-430 (459)
86 PF00702 Hydrolase: haloacid d 98.9 1E-08 2.2E-13 92.0 8.9 87 199-295 125-215 (215)
87 PRK11133 serB phosphoserine ph 98.9 1.5E-08 3.3E-13 100.3 11.0 89 202-300 182-289 (322)
88 TIGR02244 HAD-IG-Ncltidse HAD 98.9 1.7E-08 3.7E-13 100.7 11.4 96 202-306 185-327 (343)
89 PRK13582 thrH phosphoserine ph 98.8 1.4E-08 3E-13 91.8 9.5 90 201-303 68-171 (205)
90 TIGR01491 HAD-SF-IB-PSPlk HAD- 98.8 3E-08 6.6E-13 88.6 10.0 91 200-300 79-188 (201)
91 COG1778 Low specificity phosph 98.7 3E-08 6.4E-13 88.9 6.3 106 180-297 5-121 (170)
92 TIGR01493 HAD-SF-IA-v2 Haloaci 98.7 1.8E-08 3.9E-13 88.9 4.0 79 199-294 88-175 (175)
93 PRK09552 mtnX 2-hydroxy-3-keto 98.5 3.9E-07 8.4E-12 84.2 9.3 86 200-296 73-181 (219)
94 TIGR02251 HIF-SF_euk Dullard-l 98.5 1.8E-07 3.9E-12 83.6 6.3 123 184-321 2-156 (162)
95 TIGR01459 HAD-SF-IIA-hyp4 HAD- 98.5 5E-07 1.1E-11 84.9 9.0 106 181-296 6-116 (242)
96 PLN02645 phosphoglycolate phos 98.4 2.3E-06 4.9E-11 83.9 10.5 110 182-300 27-136 (311)
97 PF12689 Acid_PPase: Acid Phos 98.3 4E-06 8.6E-11 76.2 10.7 115 184-307 4-156 (169)
98 PRK08238 hypothetical protein; 98.3 4.5E-06 9.7E-11 87.0 12.1 91 202-305 73-168 (479)
99 TIGR01525 ATPase-IB_hvy heavy 98.3 3.9E-06 8.4E-11 88.4 11.2 108 177-296 358-468 (556)
100 TIGR01490 HAD-SF-IB-hyp1 HAD-s 98.2 6.7E-06 1.5E-10 74.1 9.5 92 201-303 87-198 (202)
101 TIGR01511 ATPase-IB1_Cu copper 98.2 8.7E-06 1.9E-10 86.1 11.3 106 179-297 381-488 (562)
102 TIGR01487 SPP-like sucrose-pho 98.2 1.4E-05 3.1E-10 73.3 11.0 44 183-228 1-44 (215)
103 KOG2914 Predicted haloacid-hal 98.2 1E-05 2.2E-10 76.5 10.0 104 197-303 88-197 (222)
104 PRK01158 phosphoglycolate phos 98.1 2.7E-05 5.9E-10 71.5 11.7 44 183-228 3-46 (230)
105 TIGR03333 salvage_mtnX 2-hydro 98.1 1.3E-05 2.7E-10 74.0 9.4 87 200-296 69-177 (214)
106 TIGR01512 ATPase-IB2_Cd heavy 98.1 1.4E-05 3.1E-10 83.9 9.8 107 178-296 337-446 (536)
107 TIGR01452 PGP_euk phosphoglyco 98.1 1.7E-05 3.6E-10 76.4 9.5 106 183-298 2-107 (279)
108 TIGR01533 lipo_e_P4 5'-nucleot 98.1 2.4E-05 5.2E-10 75.8 10.2 99 182-291 74-204 (266)
109 TIGR01489 DKMTPPase-SF 2,3-dik 98.0 3E-05 6.5E-10 68.4 9.0 87 200-296 71-183 (188)
110 PF13344 Hydrolase_6: Haloacid 98.0 1.8E-05 3.8E-10 65.7 7.0 100 186-296 1-100 (101)
111 PRK10671 copA copper exporting 98.0 6.1E-05 1.3E-09 83.1 12.1 109 176-296 623-733 (834)
112 COG0560 SerB Phosphoserine pho 97.9 5.5E-05 1.2E-09 70.8 9.6 94 200-304 76-188 (212)
113 KOG3109 Haloacid dehalogenase- 97.9 3.5E-05 7.7E-10 72.7 8.3 94 200-305 99-208 (244)
114 TIGR01482 SPP-subfamily Sucros 97.9 0.00012 2.7E-09 66.9 11.0 35 262-297 153-187 (225)
115 TIGR01544 HAD-SF-IE haloacid d 97.8 0.00011 2.3E-09 71.8 10.2 86 199-294 119-230 (277)
116 TIGR01488 HAD-SF-IB Haloacid D 97.8 7.8E-05 1.7E-09 65.4 7.4 84 201-294 73-177 (177)
117 TIGR02137 HSK-PSP phosphoserin 97.7 0.00015 3.3E-09 67.2 9.3 89 200-302 67-171 (203)
118 PRK11033 zntA zinc/cadmium/mer 97.6 0.00051 1.1E-08 75.2 12.1 108 176-297 541-650 (741)
119 TIGR01457 HAD-SF-IIA-hyp2 HAD- 97.6 0.00039 8.5E-09 66.0 9.8 60 183-250 1-60 (249)
120 TIGR01684 viral_ppase viral ph 97.6 0.00022 4.8E-09 70.2 7.6 60 182-250 125-186 (301)
121 TIGR01458 HAD-SF-IIA-hyp3 HAD- 97.5 0.00032 7E-09 67.0 8.6 62 183-250 1-64 (257)
122 COG0647 NagD Predicted sugar p 97.5 0.00077 1.7E-08 65.6 10.7 63 181-250 6-68 (269)
123 TIGR00685 T6PP trehalose-phosp 97.5 0.00085 1.8E-08 63.3 10.0 40 262-302 171-217 (244)
124 PRK10444 UMP phosphatase; Prov 97.4 0.00052 1.1E-08 65.5 8.6 60 183-250 1-60 (248)
125 KOG1615 Phosphoserine phosphat 97.4 0.00059 1.3E-08 63.7 7.9 81 200-293 87-191 (227)
126 TIGR01460 HAD-SF-IIA Haloacid 97.3 0.00082 1.8E-08 63.3 8.2 58 186-250 1-58 (236)
127 TIGR01485 SPP_plant-cyano sucr 97.3 0.0024 5.2E-08 60.1 11.2 41 262-303 171-211 (249)
128 PF05761 5_nucleotid: 5' nucle 97.3 0.0016 3.4E-08 67.6 10.5 96 203-307 185-329 (448)
129 TIGR01522 ATPase-IIA2_Ca golgi 97.3 0.0014 3.1E-08 73.0 10.7 110 176-297 496-639 (884)
130 PHA03398 viral phosphatase sup 97.2 0.00071 1.5E-08 66.7 7.0 59 182-250 127-188 (303)
131 PRK10187 trehalose-6-phosphate 97.2 0.0059 1.3E-07 58.8 12.8 45 184-228 15-63 (266)
132 COG4996 Predicted phosphatase 97.1 0.003 6.5E-08 55.8 8.7 97 184-292 1-131 (164)
133 TIGR01675 plant-AP plant acid 97.1 0.0022 4.7E-08 61.1 8.2 114 180-301 74-221 (229)
134 TIGR02250 FCP1_euk FCP1-like p 97.0 0.0034 7.4E-08 56.1 8.6 78 202-293 59-144 (156)
135 TIGR01456 CECR5 HAD-superfamil 97.0 0.0023 4.9E-08 63.2 8.0 104 185-300 2-109 (321)
136 PRK00192 mannosyl-3-phosphogly 97.0 0.0019 4E-08 61.8 7.0 59 182-250 3-61 (273)
137 COG4229 Predicted enolase-phos 96.9 0.0055 1.2E-07 56.9 9.2 96 200-306 102-209 (229)
138 smart00775 LNS2 LNS2 domain. T 96.9 0.013 2.9E-07 52.2 11.2 113 185-304 1-151 (157)
139 PF03767 Acid_phosphat_B: HAD 96.8 0.0018 3.9E-08 61.3 5.0 103 181-292 70-209 (229)
140 PRK10530 pyridoxal phosphate ( 96.8 0.0047 1E-07 58.1 7.8 59 182-250 2-60 (272)
141 TIGR01689 EcbF-BcbF capsule bi 96.8 0.0058 1.3E-07 53.1 7.6 77 183-260 1-89 (126)
142 TIGR01497 kdpB K+-transporting 96.7 0.0096 2.1E-07 64.8 10.7 110 176-297 419-530 (675)
143 PF12710 HAD: haloacid dehalog 96.7 0.0048 1E-07 54.5 6.9 77 204-292 92-192 (192)
144 PRK10513 sugar phosphate phosp 96.7 0.0045 9.7E-08 58.4 7.0 58 182-249 2-59 (270)
145 PRK15126 thiamin pyrimidine py 96.7 0.0049 1.1E-07 58.5 7.2 58 183-250 2-59 (272)
146 PRK10976 putative hydrolase; P 96.6 0.0055 1.2E-07 57.8 7.0 58 183-250 2-59 (266)
147 COG0561 Cof Predicted hydrolas 96.6 0.0052 1.1E-07 58.0 6.8 59 182-250 2-60 (264)
148 KOG2134 Polynucleotide kinase 96.6 0.0075 1.6E-07 61.3 8.0 116 181-297 73-228 (422)
149 TIGR02463 MPGP_rel mannosyl-3- 96.5 0.0059 1.3E-07 56.0 6.6 55 186-250 2-56 (221)
150 TIGR01484 HAD-SF-IIB HAD-super 96.5 0.0086 1.9E-07 54.1 7.6 58 186-252 2-59 (204)
151 PRK03669 mannosyl-3-phosphogly 96.5 0.0084 1.8E-07 57.2 7.4 60 181-250 5-64 (271)
152 COG4087 Soluble P-type ATPase 96.4 0.035 7.6E-07 49.1 10.1 102 188-303 19-121 (152)
153 PRK12702 mannosyl-3-phosphogly 96.4 0.0099 2.2E-07 58.8 7.4 58 183-250 1-58 (302)
154 COG2217 ZntA Cation transport 96.4 0.018 3.9E-07 63.1 10.1 108 175-294 509-618 (713)
155 TIGR01680 Veg_Stor_Prot vegeta 96.3 0.0091 2E-07 58.3 6.7 119 182-307 100-255 (275)
156 PF08282 Hydrolase_3: haloacid 96.3 0.0094 2E-07 53.9 6.3 55 186-250 1-55 (254)
157 PRK01122 potassium-transportin 96.3 0.026 5.6E-07 61.6 10.5 109 176-296 418-528 (679)
158 TIGR00099 Cof-subfamily Cof su 96.2 0.011 2.4E-07 55.5 6.7 55 186-250 2-56 (256)
159 TIGR02461 osmo_MPG_phos mannos 96.2 0.016 3.4E-07 54.4 7.4 54 185-249 1-54 (225)
160 PRK14010 potassium-transportin 96.2 0.031 6.6E-07 61.0 10.5 109 176-296 414-524 (673)
161 PRK10530 pyridoxal phosphate ( 96.2 0.015 3.2E-07 54.7 7.0 86 205-296 141-236 (272)
162 PF03031 NIF: NLI interacting 96.1 0.008 1.7E-07 52.6 4.8 123 184-320 1-150 (159)
163 KOG2882 p-Nitrophenyl phosphat 96.0 0.045 9.7E-07 54.1 9.7 114 181-304 20-134 (306)
164 PLN02887 hydrolase family prot 95.8 0.024 5.2E-07 60.8 7.6 62 178-249 303-364 (580)
165 PTZ00174 phosphomannomutase; P 95.8 0.015 3.3E-07 55.0 5.3 46 181-228 3-48 (247)
166 PRK11590 hypothetical protein; 95.7 0.13 2.9E-06 47.3 10.9 94 201-305 95-205 (211)
167 COG2503 Predicted secreted aci 95.5 0.066 1.4E-06 51.7 8.4 97 183-288 79-206 (274)
168 TIGR01116 ATPase-IIA1_Ca sarco 95.5 0.045 9.8E-07 61.5 8.5 87 199-297 535-652 (917)
169 PF06888 Put_Phosphatase: Puta 95.5 0.057 1.2E-06 51.7 8.0 95 199-302 69-197 (234)
170 KOG0207 Cation transport ATPas 95.4 0.096 2.1E-06 58.3 10.4 103 176-290 696-800 (951)
171 TIGR01524 ATPase-IIIB_Mg magne 95.3 0.12 2.7E-06 57.8 11.0 87 199-297 513-624 (867)
172 TIGR01486 HAD-SF-IIB-MPGP mann 95.2 0.055 1.2E-06 51.0 6.9 55 186-250 2-56 (256)
173 TIGR01647 ATPase-IIIA_H plasma 95.1 0.15 3.2E-06 56.3 10.8 110 176-297 410-556 (755)
174 KOG1618 Predicted phosphatase 94.8 0.14 3.1E-06 51.3 8.8 102 185-300 37-144 (389)
175 COG3700 AphA Acid phosphatase 94.7 0.28 6E-06 45.7 9.8 83 210-302 122-211 (237)
176 PRK10517 magnesium-transportin 94.7 0.18 3.8E-06 56.9 10.2 109 176-296 507-658 (902)
177 TIGR01517 ATPase-IIB_Ca plasma 94.3 0.35 7.7E-06 54.6 11.6 86 199-296 577-689 (941)
178 PRK15122 magnesium-transportin 94.3 0.24 5.3E-06 55.7 10.3 87 199-297 548-659 (903)
179 TIGR01545 YfhB_g-proteo haloac 94.1 0.53 1.2E-05 43.8 10.6 94 201-305 94-204 (210)
180 TIGR01494 ATPase_P-type ATPase 93.8 0.51 1.1E-05 49.1 10.8 106 177-297 321-428 (499)
181 PF08235 LNS2: LNS2 (Lipin/Ned 93.8 0.38 8.2E-06 43.5 8.5 105 185-297 1-141 (157)
182 PRK14502 bifunctional mannosyl 93.5 0.23 4.9E-06 54.3 7.8 58 183-250 416-473 (694)
183 COG3882 FkbH Predicted enzyme 93.1 1.1 2.4E-05 47.3 11.7 111 181-304 220-354 (574)
184 TIGR02463 MPGP_rel mannosyl-3- 92.9 0.15 3.2E-06 46.8 4.7 41 256-298 178-218 (221)
185 COG3769 Predicted hydrolase (H 92.8 0.24 5.1E-06 47.6 5.8 58 182-250 6-63 (274)
186 PRK14501 putative bifunctional 92.0 0.42 9.1E-06 52.4 7.5 50 179-228 488-541 (726)
187 TIGR01484 HAD-SF-IIB HAD-super 91.6 0.17 3.7E-06 45.7 3.3 35 262-297 167-201 (204)
188 COG4359 Uncharacterized conser 91.2 1.1 2.4E-05 41.9 8.2 85 201-295 73-179 (220)
189 PRK00192 mannosyl-3-phosphogly 91.0 0.27 5.9E-06 46.9 4.3 40 262-302 194-234 (273)
190 TIGR02471 sucr_syn_bact_C sucr 90.8 0.25 5.5E-06 45.9 3.7 39 262-302 163-201 (236)
191 PLN03017 trehalose-phosphatase 90.8 0.59 1.3E-05 47.6 6.5 44 183-228 111-158 (366)
192 PLN02151 trehalose-phosphatase 90.6 0.61 1.3E-05 47.3 6.4 43 184-228 99-145 (354)
193 KOG2630 Enolase-phosphatase E- 90.6 1.3 2.8E-05 42.7 8.2 95 201-306 123-229 (254)
194 TIGR02245 HAD_IIID1 HAD-superf 90.4 0.76 1.7E-05 42.8 6.5 60 180-249 18-83 (195)
195 PLN02580 trehalose-phosphatase 89.8 1.1 2.3E-05 46.1 7.5 47 180-228 116-166 (384)
196 PLN02423 phosphomannomutase 89.7 0.56 1.2E-05 44.5 5.1 44 182-228 5-49 (245)
197 TIGR00099 Cof-subfamily Cof su 89.2 0.38 8.2E-06 45.1 3.6 35 262-297 192-226 (256)
198 PLN03063 alpha,alpha-trehalose 89.1 1.2 2.6E-05 49.7 7.9 66 178-251 502-574 (797)
199 KOG3120 Predicted haloacid deh 89.1 1.4 3E-05 42.4 7.1 84 201-294 84-201 (256)
200 KOG2469 IMP-GMP specific 5'-nu 88.9 0.95 2.1E-05 46.6 6.3 52 263-314 293-345 (424)
201 PLN02205 alpha,alpha-trehalose 88.8 1.3 2.7E-05 49.9 7.8 59 170-228 579-643 (854)
202 PF05152 DUF705: Protein of un 88.3 1.5 3.3E-05 43.3 7.1 58 184-250 123-182 (297)
203 TIGR01523 ATPase-IID_K-Na pota 88.0 2 4.3E-05 49.4 8.9 86 200-297 645-767 (1053)
204 COG5610 Predicted hydrolase (H 87.8 1.4 3E-05 46.3 6.7 88 207-301 105-201 (635)
205 PLN03064 alpha,alpha-trehalose 87.3 2.1 4.5E-05 48.7 8.2 67 178-252 586-665 (934)
206 COG1877 OtsB Trehalose-6-phosp 86.7 1.9 4E-05 42.2 6.6 49 180-228 15-67 (266)
207 TIGR02471 sucr_syn_bact_C sucr 86.1 0.97 2.1E-05 42.0 4.3 53 186-250 2-54 (236)
208 PF08282 Hydrolase_3: haloacid 86.1 1.1 2.3E-05 40.5 4.4 39 262-302 190-228 (254)
209 PRK10513 sugar phosphate phosp 85.4 0.96 2.1E-05 42.6 3.9 35 262-297 200-234 (270)
210 PRK10976 putative hydrolase; P 85.3 0.79 1.7E-05 43.2 3.2 35 262-297 194-228 (266)
211 KOG2470 Similar to IMP-GMP spe 84.6 1.7 3.8E-05 44.3 5.4 95 203-304 242-377 (510)
212 KOG4549 Magnesium-dependent ph 84.2 7.3 0.00016 34.5 8.4 43 201-251 44-86 (144)
213 KOG1618 Predicted phosphatase 83.6 1.5 3.3E-05 44.1 4.5 87 221-307 224-345 (389)
214 TIGR01486 HAD-SF-IIB-MPGP mann 83.0 1.5 3.2E-05 41.3 4.0 37 262-299 180-218 (256)
215 PF05116 S6PP: Sucrose-6F-phos 81.5 5.5 0.00012 37.9 7.4 54 249-305 157-210 (247)
216 TIGR01106 ATPase-IIC_X-K sodiu 81.3 7 0.00015 44.7 9.2 41 200-249 567-607 (997)
217 PF02358 Trehalose_PPase: Treh 81.1 2 4.4E-05 40.1 4.2 42 187-228 1-46 (235)
218 PRK15126 thiamin pyrimidine py 78.7 1.7 3.7E-05 41.2 2.9 34 262-296 192-225 (272)
219 KOG3189 Phosphomannomutase [Li 78.3 4.3 9.3E-05 38.6 5.3 42 184-228 12-53 (252)
220 COG4850 Uncharacterized conser 77.0 14 0.00031 37.4 8.7 116 180-305 159-314 (373)
221 TIGR03365 Bsubt_queE 7-cyano-7 73.9 21 0.00045 33.9 8.8 98 194-307 78-188 (238)
222 PRK10725 fructose-1-P/6-phosph 73.1 4.1 8.8E-05 35.9 3.6 34 182-220 4-37 (188)
223 PRK03669 mannosyl-3-phosphogly 72.4 4 8.8E-05 38.8 3.6 39 262-302 191-232 (271)
224 TIGR02253 CTE7 HAD superfamily 72.1 4.7 0.0001 36.5 3.8 14 183-196 2-15 (221)
225 PRK11587 putative phosphatase; 70.8 5 0.00011 36.7 3.7 15 182-196 2-16 (218)
226 PLN03243 haloacid dehalogenase 70.3 5 0.00011 38.6 3.8 17 180-196 21-37 (260)
227 COG0561 Cof Predicted hydrolas 70.2 4.8 0.0001 37.8 3.6 35 262-297 193-227 (264)
228 TIGR02461 osmo_MPG_phos mannos 69.4 6.3 0.00014 36.9 4.1 34 263-297 186-221 (225)
229 PF06941 NT5C: 5' nucleotidase 68.4 17 0.00036 32.8 6.6 104 198-318 70-178 (191)
230 PLN02887 hydrolase family prot 67.9 5.6 0.00012 43.0 3.9 35 262-297 511-545 (580)
231 TIGR03351 PhnX-like phosphonat 67.3 7.2 0.00016 35.4 4.0 14 183-196 1-14 (220)
232 PRK01713 ornithine carbamoyltr 66.8 1.1E+02 0.0025 30.7 12.7 114 177-305 67-191 (334)
233 TIGR01657 P-ATPase-V P-type AT 66.0 25 0.00054 40.6 8.8 41 200-249 655-695 (1054)
234 PLN02382 probable sucrose-phos 66.0 7.6 0.00017 40.0 4.3 40 262-302 179-221 (413)
235 PLN02382 probable sucrose-phos 65.6 13 0.00028 38.3 5.9 56 185-249 11-68 (413)
236 PRK03515 ornithine carbamoyltr 65.4 1.3E+02 0.0029 30.3 12.9 114 177-305 66-191 (336)
237 TIGR02009 PGMB-YQAB-SF beta-ph 64.7 8.3 0.00018 33.7 3.8 33 183-220 1-33 (185)
238 TIGR02252 DREG-2 REG-2-like, H 64.0 7 0.00015 35.0 3.2 13 184-196 1-13 (203)
239 PRK00856 pyrB aspartate carbam 63.1 1.6E+02 0.0036 29.2 13.3 115 177-305 66-192 (305)
240 PRK12562 ornithine carbamoyltr 62.9 1.5E+02 0.0032 30.0 12.6 114 177-305 66-191 (334)
241 PRK13226 phosphoglycolate phos 62.9 8.6 0.00019 35.6 3.7 15 182-196 11-25 (229)
242 TIGR02254 YjjG/YfnB HAD superf 62.2 9.3 0.0002 34.4 3.7 16 183-198 1-16 (224)
243 PRK10563 6-phosphogluconate ph 61.3 9.4 0.0002 34.7 3.6 15 182-196 3-17 (221)
244 TIGR01658 EYA-cons_domain eyes 61.3 23 0.00051 34.7 6.3 77 221-305 178-260 (274)
245 TIGR02329 propionate_PrpR prop 60.8 54 0.0012 35.1 9.6 85 205-303 85-171 (526)
246 PF05116 S6PP: Sucrose-6F-phos 60.7 6.5 0.00014 37.4 2.5 57 184-250 3-59 (247)
247 PHA02597 30.2 hypothetical pro 60.4 5.1 0.00011 35.9 1.6 16 183-198 2-17 (197)
248 PRK13288 pyrophosphatase PpaX; 60.1 9.6 0.00021 34.6 3.4 15 182-196 2-16 (214)
249 PRK13223 phosphoglycolate phos 59.7 9.1 0.0002 36.8 3.3 14 183-196 13-26 (272)
250 PLN02342 ornithine carbamoyltr 59.5 1.9E+02 0.0041 29.5 12.8 114 177-305 106-228 (348)
251 PF06189 5-nucleotidase: 5'-nu 59.2 1.1E+02 0.0024 30.1 10.6 88 202-305 165-261 (264)
252 PRK04284 ornithine carbamoyltr 57.8 2E+02 0.0044 28.9 12.6 114 177-305 66-190 (332)
253 PF06506 PrpR_N: Propionate ca 57.6 29 0.00064 31.1 6.1 89 205-305 65-153 (176)
254 COG0731 Fe-S oxidoreductases [ 57.6 37 0.0008 33.9 7.2 35 193-228 84-119 (296)
255 cd04728 ThiG Thiazole synthase 57.4 2E+02 0.0042 28.2 12.2 93 202-307 105-209 (248)
256 KOG2116 Protein involved in pl 56.3 35 0.00075 37.6 7.2 122 180-309 527-684 (738)
257 PRK13222 phosphoglycolate phos 56.0 14 0.0003 33.4 3.7 16 181-196 4-19 (226)
258 PLN02770 haloacid dehalogenase 56.0 11 0.00025 35.4 3.2 15 182-196 21-35 (248)
259 COG0546 Gph Predicted phosphat 55.8 14 0.0003 34.2 3.7 15 182-196 3-17 (220)
260 COG1609 PurR Transcriptional r 55.4 93 0.002 30.7 9.7 128 100-228 26-185 (333)
261 PRK13478 phosphonoacetaldehyde 55.3 9.6 0.00021 36.1 2.6 15 183-197 4-18 (267)
262 PRK10826 2-deoxyglucose-6-phos 55.1 12 0.00026 34.2 3.2 15 182-196 6-20 (222)
263 TIGR01422 phosphonatase phosph 54.9 10 0.00023 35.4 2.8 14 183-196 2-15 (253)
264 PRK14988 GMP/IMP nucleotidase; 54.9 7.1 0.00015 36.3 1.7 20 172-196 4-23 (224)
265 PRK15424 propionate catabolism 54.8 1.4E+02 0.0031 32.1 11.5 98 205-320 95-194 (538)
266 COG2216 KdpB High-affinity K+ 54.7 70 0.0015 34.7 9.0 101 177-289 421-523 (681)
267 COG0761 lytB 4-Hydroxy-3-methy 54.1 1E+02 0.0022 30.8 9.5 105 202-320 169-282 (294)
268 PLN02779 haloacid dehalogenase 53.4 17 0.00038 35.2 4.1 16 181-196 38-53 (286)
269 PRK13225 phosphoglycolate phos 53.4 15 0.00031 35.7 3.6 34 181-219 60-93 (273)
270 PRK14805 ornithine carbamoyltr 51.7 2.5E+02 0.0055 27.8 12.7 114 177-305 59-181 (302)
271 PRK09449 dUMP phosphatase; Pro 51.5 13 0.00027 33.9 2.7 15 182-196 2-16 (224)
272 PRK00779 ornithine carbamoyltr 51.3 2.6E+02 0.0056 27.7 12.4 114 177-305 64-186 (304)
273 PRK10748 flavin mononucleotide 51.0 9.6 0.00021 35.6 1.9 15 182-196 9-23 (238)
274 TIGR01548 HAD-SF-IA-hyp1 haloa 49.9 18 0.00038 32.5 3.4 12 185-196 2-13 (197)
275 PF06437 ISN1: IMP-specific 5' 49.3 21 0.00046 36.9 4.1 45 256-302 347-399 (408)
276 KOG0202 Ca2+ transporting ATPa 49.3 90 0.002 35.6 9.1 84 201-296 584-698 (972)
277 TIGR00365 monothiol glutaredox 48.0 1.5E+02 0.0032 24.1 9.8 86 208-295 3-91 (97)
278 COG0474 MgtA Cation transport 47.5 69 0.0015 36.5 8.2 86 199-298 545-661 (917)
279 TIGR01428 HAD_type_II 2-haloal 47.3 9.6 0.00021 34.0 1.2 16 183-198 1-16 (198)
280 PF11019 DUF2608: Protein of u 47.2 1.4E+02 0.003 28.8 9.2 40 262-302 166-209 (252)
281 cd03028 GRX_PICOT_like Glutare 47.1 1.4E+02 0.0031 23.6 8.6 77 219-295 8-87 (90)
282 TIGR01990 bPGM beta-phosphoglu 46.1 19 0.00041 31.4 2.9 31 185-220 1-31 (185)
283 TIGR01993 Pyr-5-nucltdase pyri 45.7 18 0.00039 31.9 2.7 13 184-196 1-13 (184)
284 TIGR00658 orni_carb_tr ornithi 45.4 3.2E+02 0.0068 27.1 12.5 114 177-305 60-182 (304)
285 PF06437 ISN1: IMP-specific 5' 45.4 76 0.0017 32.9 7.3 46 181-228 145-192 (408)
286 TIGR00433 bioB biotin syntheta 43.9 2.9E+02 0.0064 26.3 12.0 122 175-302 126-273 (296)
287 TIGR01491 HAD-SF-IB-PSPlk HAD- 42.7 12 0.00026 33.0 1.1 15 182-196 3-17 (201)
288 PLN02423 phosphomannomutase 42.7 34 0.00074 32.4 4.2 39 265-305 192-234 (245)
289 PF00072 Response_reg: Respons 42.3 1.6E+02 0.0035 22.8 9.8 90 205-305 9-103 (112)
290 TIGR02247 HAD-1A3-hyp Epoxide 42.1 15 0.00032 33.2 1.6 14 183-196 2-15 (211)
291 PF09547 Spore_IV_A: Stage IV 42.1 1.6E+02 0.0035 31.3 9.2 79 172-253 126-214 (492)
292 cd02173 ECT CTP:phosphoethanol 41.6 2.5E+02 0.0055 24.9 14.0 112 202-321 14-143 (152)
293 PRK08883 ribulose-phosphate 3- 41.0 1.8E+02 0.004 27.3 8.8 88 176-274 19-109 (220)
294 TIGR01652 ATPase-Plipid phosph 40.4 91 0.002 36.1 7.9 28 200-228 630-657 (1057)
295 PF05822 UMPH-1: Pyrimidine 5' 40.3 60 0.0013 31.6 5.5 84 201-294 90-198 (246)
296 PRK11590 hypothetical protein; 40.2 21 0.00045 32.8 2.2 14 183-196 6-19 (211)
297 TIGR01163 rpe ribulose-phospha 40.0 2.8E+02 0.006 24.8 13.2 116 169-302 4-133 (210)
298 TIGR01549 HAD-SF-IA-v1 haloaci 39.9 23 0.0005 30.1 2.4 29 185-218 1-29 (154)
299 PF14097 SpoVAE: Stage V sporu 39.6 93 0.002 28.9 6.2 62 220-286 1-65 (180)
300 COG5083 SMP2 Uncharacterized p 39.5 70 0.0015 34.0 6.1 115 180-297 372-516 (580)
301 PF14597 Lactamase_B_5: Metall 39.2 52 0.0011 31.0 4.6 42 205-253 42-83 (199)
302 KOG0832 Mitochondrial/chloropl 38.5 1.7E+02 0.0036 28.5 8.0 100 185-302 82-203 (251)
303 PRK08745 ribulose-phosphate 3- 38.0 2.2E+02 0.0048 27.0 8.9 100 168-279 8-118 (223)
304 PF00702 Hydrolase: haloacid d 38.0 14 0.0003 32.7 0.7 39 264-304 136-174 (215)
305 PRK10200 putative racemase; Pr 36.8 83 0.0018 29.7 5.8 45 200-253 58-103 (230)
306 TIGR01449 PGP_bact 2-phosphogl 35.0 32 0.00069 30.8 2.6 11 186-196 1-11 (213)
307 PRK08005 epimerase; Validated 34.5 2.7E+02 0.0058 26.3 8.8 115 176-306 20-142 (210)
308 PRK00208 thiG thiazole synthas 33.8 4.6E+02 0.01 25.6 13.8 93 202-307 105-209 (250)
309 TIGR03609 S_layer_CsaB polysac 33.7 2.6E+02 0.0056 26.7 8.8 75 210-305 22-109 (298)
310 PF07213 DAP10: DAP10 membrane 33.2 21 0.00046 28.9 1.0 19 5-23 15-33 (79)
311 TIGR02109 PQQ_syn_pqqE coenzym 32.8 2.2E+02 0.0048 28.1 8.4 111 177-302 48-180 (358)
312 PF04028 DUF374: Domain of unk 31.8 2.3E+02 0.005 22.4 6.7 55 221-283 13-68 (74)
313 PLN02919 haloacid dehalogenase 30.5 51 0.0011 38.2 3.8 15 182-196 74-88 (1057)
314 CHL00076 chlB photochlorophyll 30.5 3.5E+02 0.0077 28.8 9.9 32 271-303 302-337 (513)
315 KOG0087 GTPase Rab11/YPT3, sma 30.2 1.2E+02 0.0027 29.0 5.7 52 202-253 101-155 (222)
316 cd06595 GH31_xylosidase_XylS-l 30.0 1.2E+02 0.0025 29.6 5.8 51 176-227 32-96 (292)
317 PF04312 DUF460: Protein of un 30.0 1.5E+02 0.0033 26.4 5.9 68 170-251 34-103 (138)
318 PF00834 Ribul_P_3_epim: Ribul 29.7 1.2E+02 0.0025 28.4 5.4 131 176-321 19-155 (201)
319 PRK13762 tRNA-modifying enzyme 29.6 2.1E+02 0.0045 28.6 7.5 30 198-228 139-168 (322)
320 cd03027 GRX_DEP Glutaredoxin ( 29.5 2.4E+02 0.0052 21.0 7.2 50 236-285 13-62 (73)
321 TIGR01489 DKMTPPase-SF 2,3-dik 29.3 32 0.00069 29.9 1.6 15 185-199 3-17 (188)
322 PRK06698 bifunctional 5'-methy 29.1 31 0.00067 35.7 1.7 14 183-196 241-254 (459)
323 PRK02102 ornithine carbamoyltr 29.1 6.1E+02 0.013 25.6 15.0 114 177-305 67-190 (331)
324 COG1011 Predicted hydrolase (H 29.0 29 0.00063 31.3 1.3 16 182-197 3-18 (229)
325 KOG2832 TFIIF-interacting CTD 28.8 1.7E+02 0.0037 30.3 6.7 90 184-284 190-293 (393)
326 PRK05301 pyrroloquinoline quin 28.6 2.9E+02 0.0063 27.6 8.5 109 178-302 58-189 (378)
327 COG4030 Uncharacterized protei 28.4 66 0.0014 31.5 3.6 31 262-294 195-225 (315)
328 KOG0208 Cation transport ATPas 28.1 1.1E+02 0.0024 35.5 5.7 90 202-297 648-745 (1140)
329 COG0745 OmpR Response regulato 27.9 5.2E+02 0.011 24.3 10.0 90 206-307 12-106 (229)
330 TIGR00670 asp_carb_tr aspartat 27.7 6.1E+02 0.013 25.1 12.2 114 177-305 60-186 (301)
331 PF09269 DUF1967: Domain of un 27.6 50 0.0011 25.6 2.2 22 263-284 45-66 (69)
332 TIGR00035 asp_race aspartate r 27.5 2.2E+02 0.0048 26.5 7.0 44 201-253 59-103 (229)
333 TIGR03595 Obg_CgtA_exten Obg f 27.4 63 0.0014 25.1 2.8 23 263-285 45-67 (69)
334 smart00775 LNS2 LNS2 domain. T 27.3 4.3E+02 0.0094 23.2 9.4 97 176-283 37-151 (157)
335 TIGR00676 fadh2 5,10-methylene 27.3 5.7E+02 0.012 24.6 13.3 85 197-284 8-98 (272)
336 PRK14804 ornithine carbamoyltr 27.2 6.3E+02 0.014 25.1 12.7 113 177-305 64-187 (311)
337 cd07041 STAS_RsbR_RsbS_like Su 26.9 2.6E+02 0.0057 22.3 6.6 59 180-251 38-96 (109)
338 PRK02083 imidazole glycerol ph 26.8 5.4E+02 0.012 24.2 11.1 47 205-253 154-202 (253)
339 COG1911 RPL30 Ribosomal protei 26.7 1.6E+02 0.0035 24.9 5.1 52 205-261 23-83 (100)
340 COG1366 SpoIIAA Anti-anti-sigm 26.6 2.4E+02 0.0051 23.3 6.4 63 177-252 38-100 (117)
341 PF11181 YflT: Heat induced st 26.3 1.9E+02 0.0041 23.7 5.6 38 203-250 9-49 (103)
342 PF14488 DUF4434: Domain of un 25.9 2.2E+02 0.0048 25.7 6.4 54 175-229 26-89 (166)
343 KOG3109 Haloacid dehalogenase- 25.2 47 0.001 32.1 1.9 31 181-212 13-43 (244)
344 PTZ00174 phosphomannomutase; P 25.0 84 0.0018 29.5 3.7 35 263-302 193-231 (247)
345 PF04273 DUF442: Putative phos 24.8 4.2E+02 0.0091 22.3 7.7 13 175-187 20-32 (110)
346 PLN02951 Molybderin biosynthes 24.8 4.6E+02 0.01 26.6 9.2 44 178-228 102-146 (373)
347 PRK09492 treR trehalose repres 24.5 5.9E+02 0.013 23.9 11.7 53 173-226 130-183 (315)
348 COG1212 KdsB CMP-2-keto-3-deox 24.5 4.9E+02 0.011 25.4 8.6 13 238-250 78-90 (247)
349 COG1794 RacX Aspartate racemas 24.3 2.7E+02 0.0058 27.0 6.8 43 202-253 60-103 (230)
350 TIGR02468 sucrsPsyn_pln sucros 24.2 3.3E+02 0.0072 31.9 8.8 44 262-306 960-1005(1050)
351 TIGR03649 ergot_EASG ergot alk 23.8 6E+02 0.013 23.7 10.8 48 204-252 83-131 (285)
352 COG0313 Predicted methyltransf 23.5 6.1E+02 0.013 25.2 9.3 45 205-252 66-110 (275)
353 PF01861 DUF43: Protein of unk 23.3 1.5E+02 0.0033 28.8 5.1 94 257-353 25-123 (243)
354 PF08353 DUF1727: Domain of un 23.3 97 0.0021 26.4 3.4 58 170-227 41-110 (113)
355 PRK13361 molybdenum cofactor b 23.1 5.3E+02 0.011 25.4 9.1 44 178-228 57-101 (329)
356 PLN02205 alpha,alpha-trehalose 22.6 1.4E+02 0.0031 33.9 5.5 32 263-295 767-801 (854)
357 KOG3107 Predicted haloacid deh 22.5 3.8E+02 0.0083 28.1 7.9 74 221-303 373-452 (468)
358 CHL00162 thiG thiamin biosynth 22.1 7.8E+02 0.017 24.4 10.4 104 206-324 126-239 (267)
359 PRK02255 putrescine carbamoylt 22.1 8.2E+02 0.018 24.7 12.3 114 177-305 63-188 (338)
360 cd01981 Pchlide_reductase_B Pc 22.0 5.4E+02 0.012 26.3 9.2 91 208-304 227-334 (430)
361 TIGR01545 YfhB_g-proteo haloac 21.9 52 0.0011 30.5 1.6 17 183-199 5-21 (210)
362 PRK14501 putative bifunctional 21.5 1.3E+02 0.0028 33.2 4.8 37 263-302 662-700 (726)
363 COG0036 Rpe Pentose-5-phosphat 21.5 5.7E+02 0.012 24.5 8.5 126 168-307 8-146 (220)
364 cd04121 Rab40 Rab40 subfamily. 21.3 5.7E+02 0.012 23.0 8.3 52 203-254 94-147 (189)
365 cd05014 SIS_Kpsf KpsF-like pro 21.3 1.8E+02 0.0039 23.8 4.6 29 200-229 57-85 (128)
366 TIGR01369 CPSaseII_lrg carbamo 21.3 5.7E+02 0.012 29.7 10.0 126 176-305 34-171 (1050)
367 PLN02527 aspartate carbamoyltr 21.2 8.1E+02 0.018 24.2 11.6 115 177-305 60-188 (306)
368 PRK04302 triosephosphate isome 21.2 6.6E+02 0.014 23.2 13.0 122 173-312 76-212 (223)
369 PLN02580 trehalose-phosphatase 21.0 1.4E+02 0.0031 30.8 4.6 40 262-302 305-351 (384)
370 PTZ00170 D-ribulose-5-phosphat 20.9 4.7E+02 0.01 24.5 7.9 95 168-273 11-116 (228)
371 TIGR03471 HpnJ hopanoid biosyn 20.1 9.5E+02 0.021 24.8 10.6 107 182-302 245-373 (472)
372 PRK11091 aerobic respiration c 20.0 7.4E+02 0.016 27.0 10.2 87 209-305 540-631 (779)
No 1
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=100.00 E-value=2.3e-37 Score=276.05 Aligned_cols=168 Identities=30% Similarity=0.401 Sum_probs=156.3
Q ss_pred CCCCCCcccCCccCCChHHHHHcCCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHH
Q 017982 159 HLALPHVTVPDIRYIDWAELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDAS 238 (363)
Q Consensus 159 ~L~~P~~~v~sI~~Id~~~L~~~GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~ 238 (363)
.++.|+.++.++++|+++.|+++|++++++|+||||..|...+..|++++|+..++ ..|++++|+||+. +.
T Consensus 4 k~~~Pd~~v~tv~~i~~~~L~~~Gikgvi~DlDNTLv~wd~~~~tpe~~~W~~e~k-~~gi~v~vvSNn~--------e~ 74 (175)
T COG2179 4 KFLQPDKLVETVFDITPDILKAHGIKGVILDLDNTLVPWDNPDATPELRAWLAELK-EAGIKVVVVSNNK--------ES 74 (175)
T ss_pred hhhChhHHHhhHhhCCHHHHHHcCCcEEEEeccCceecccCCCCCHHHHHHHHHHH-hcCCEEEEEeCCC--------HH
Confidence 35789999999999999999999999999999999999999999999999999999 6899999999986 68
Q ss_pred HHHHHHHHhCCeEEEcccCCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCCCCCchhHHHHHH
Q 017982 239 KARKLEGKIGIKVIRHRVKKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSLAEEPFIVRQVR 317 (363)
Q Consensus 239 ~a~~i~~~LGi~~I~~~~kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~~~~e~~~t~~~R 317 (363)
++..+++.+|+++|+ .++||.+ .|++|++.|++++++|+|||||++|||.+||++||+||+|.|...+ +.|.|+++|
T Consensus 75 RV~~~~~~l~v~fi~-~A~KP~~~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~~tIlV~Pl~~~-d~~~t~~nR 152 (175)
T COG2179 75 RVARAAEKLGVPFIY-RAKKPFGRAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGMRTILVEPLVAP-DGWITKINR 152 (175)
T ss_pred HHHhhhhhcCCceee-cccCccHHHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCcEEEEEEEeccc-cchhhhhhH
Confidence 999999999999995 6789998 7899999999999999999999999999999999999999999977 779999999
Q ss_pred HHHHHHHHHHHhc-CCCCCCC
Q 017982 318 KLEVTIVNRWFRR-GLKPISH 337 (363)
Q Consensus 318 ~lE~~vl~~~~~~-g~~~~~~ 337 (363)
++|+++++.+..+ |..-|+.
T Consensus 153 ~~Er~v~~~l~~k~g~i~~k~ 173 (175)
T COG2179 153 WRERRVLKKLGKKYGPIHWKE 173 (175)
T ss_pred HHHHHHHHHHHHhcCCccccc
Confidence 9999999888776 7665543
No 2
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=100.00 E-value=2.9e-34 Score=258.50 Aligned_cols=158 Identities=41% Similarity=0.661 Sum_probs=142.4
Q ss_pred ccchhhhhhhhcCCCCCCCCcccCCccCCChHH--HHHcCCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCC-eE
Q 017982 145 EGIVSSTVVFAKDRHLALPHVTVPDIRYIDWAE--LQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGH-DI 221 (363)
Q Consensus 145 ~Gi~~~~~~l~~~P~L~~P~~~v~sI~~Id~~~--L~~~GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gi-kl 221 (363)
+|+.+... ++++|+|+.|++++++|++||++. |++.||+++++|+||||+.|+..+++|++.+||++|++.+|. ++
T Consensus 2 ~a~~~~~~-~~~~p~l~~P~l~V~si~~I~~~~~~Lk~~Gik~li~DkDNTL~~~~~~~i~~~~~~~~~~l~~~~~~~~v 80 (168)
T PF09419_consen 2 SATLAVFR-LLRNPSLLLPHLYVPSIRDIDFEANHLKKKGIKALIFDKDNTLTPPYEDEIPPEYAEWLNELKKQFGKDRV 80 (168)
T ss_pred chhHHHHH-HHcCccccCCCEEcCChhhCCcchhhhhhcCceEEEEcCCCCCCCCCcCcCCHHHHHHHHHHHHHCCCCeE
Confidence 35566666 678999999999999999999999 999999999999999999999999999999999999966554 69
Q ss_pred EEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEcccCCCchhHHHHHHHhCC-----CCCcEEEEccCCcccHHHHHHcCC
Q 017982 222 AVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAGTAEEIEKHFGC-----QSSQLIMVGDRPFTDIVYGNRNGF 296 (363)
Q Consensus 222 ~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~~~kKP~p~~~~alk~lgl-----~pee~vmVGDrL~TDI~~A~raGi 296 (363)
+||||+.|+.+ |+.+.+++.+++.+|++++.|..+||. .+.++++.++. .|+|++|||||++|||.+||++|+
T Consensus 81 ~IvSNsaGs~~-d~~~~~a~~~~~~lgIpvl~h~~kKP~-~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G~ 158 (168)
T PF09419_consen 81 LIVSNSAGSSD-DPDGERAEALEKALGIPVLRHRAKKPG-CFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMGS 158 (168)
T ss_pred EEEECCCCccc-CccHHHHHHHHHhhCCcEEEeCCCCCc-cHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhccCc
Confidence 99999998876 777899999999999999888899994 35677777764 499999999999999999999999
Q ss_pred eEEEEcCCC
Q 017982 297 LTILTEPLS 305 (363)
Q Consensus 297 ~TIlV~p~~ 305 (363)
+||||..++
T Consensus 159 ~tilv~~gv 167 (168)
T PF09419_consen 159 YTILVTDGV 167 (168)
T ss_pred eEEEEecCc
Confidence 999998765
No 3
>KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.98 E-value=1.2e-31 Score=236.50 Aligned_cols=184 Identities=66% Similarity=1.044 Sum_probs=169.7
Q ss_pred cccccccchhhhhhhhcCCCCCCCCcccCCccCCChHHHHHcCCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCC-
Q 017982 140 QRINVEGIVSSTVVFAKDRHLALPHVTVPDIRYIDWAELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFG- 218 (363)
Q Consensus 140 q~ln~~Gi~~~~~~l~~~P~L~~P~~~v~sI~~Id~~~L~~~GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~G- 218 (363)
|++|++||....++ +++|++..||..++++.+|+++-++..|||+||+|+|||++.+++...+|.....+++|+..+|
T Consensus 1 ~~iNIeGi~~~~~~-v~npr~~~Ph~~vptf~~ip~~I~~~~~ikavVlDKDNcit~P~~~~Iwp~~l~~ie~~~~vyge 79 (190)
T KOG2961|consen 1 QRINIEGIVSSVSV-VVNPRFVLPHVSVPTFRYIPWEILKRKGIKAVVLDKDNCITAPYSLAIWPPLLPSIERCKAVYGE 79 (190)
T ss_pred CceehHHhhhhhee-eeCcceeccccccCccccCCcchhhccCceEEEEcCCCeeeCCcccccCchhHHHHHHHHHHhCc
Confidence 56899999999985 6789999999999999999999999999999999999999999999999999999999998888
Q ss_pred CeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEcccCCCchhHHHHHHHhC----CCCCcEEEEccCCcccHHHHHHc
Q 017982 219 HDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAGTAEEIEKHFG----CQSSQLIMVGDRPFTDIVYGNRN 294 (363)
Q Consensus 219 ikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~~~kKP~p~~~~alk~lg----l~pee~vmVGDrL~TDI~~A~ra 294 (363)
..++|+||+.|+..+|++++.++.+++..||+++.|..+||...-+..-..+| ..++|++|||||++|||..||++
T Consensus 80 k~i~v~SNsaG~~~~D~d~s~Ak~le~k~gIpVlRHs~kKP~ct~E~~~y~~~Nshv~~~se~~~vGDRlfTDI~~aN~m 159 (190)
T KOG2961|consen 80 KDIAVFSNSAGLTEYDHDDSKAKALEAKIGIPVLRHSVKKPACTAEEVEYHFGNSHVCTSSELIMVGDRLFTDIVYANRM 159 (190)
T ss_pred ccEEEEecCcCccccCCchHHHHHHHHhhCCceEeecccCCCccHHHHHHHhCCcccCChhHeEEEccchhhhHhhhhhc
Confidence 57999999999988999999999999999999999999999985555555667 78999999999999999999999
Q ss_pred CCeEEEEcCCCCCCchhHHHHHHHHHHHHH
Q 017982 295 GFLTILTEPLSLAEEPFIVRQVRKLEVTIV 324 (363)
Q Consensus 295 Gi~TIlV~p~~~~~e~~~t~~~R~lE~~vl 324 (363)
|..++|+.+++..++.+..+..|++|..++
T Consensus 160 Gs~gVw~~~gv~~~~n~i~~~~~~l~~~l~ 189 (190)
T KOG2961|consen 160 GSLGVWTEPGVRAEENFIVRQVRRLELALL 189 (190)
T ss_pred cceeEEecccccccchHHHHHHHHHHHHhh
Confidence 999999999999999998888888886543
No 4
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=99.94 E-value=4.2e-26 Score=204.27 Aligned_cols=166 Identities=38% Similarity=0.568 Sum_probs=147.7
Q ss_pred CCCCCcccCCccCCChHHHHHcCCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHH
Q 017982 160 LALPHVTVPDIRYIDWAELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASK 239 (363)
Q Consensus 160 L~~P~~~v~sI~~Id~~~L~~~GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~ 239 (363)
++.|+++++++.+|+++.|++.|++++++|+|+||+.+....++|++.++|++|+ +.|++++|+||+.. ...
T Consensus 2 ~~~~~~~~~~~~~i~~~~~~~~~v~~vv~D~Dgtl~~~~~~~~~pgv~e~L~~Lk-~~g~~l~I~Sn~~~-------~~~ 73 (170)
T TIGR01668 2 FCLPHAIVKTLNDLTIDLLKKVGIKGVVLDKDNTLVYPDHNEAYPALRDWIEELK-AAGRKLLIVSNNAG-------EQR 73 (170)
T ss_pred CcCcccccCchhhCCHHHHHHCCCCEEEEecCCccccCCCCCcChhHHHHHHHHH-HcCCEEEEEeCCch-------HHH
Confidence 6899999999999999999999999999999999998877789999999999998 67999999999962 356
Q ss_pred HHHHHHHhCCeEEEcccCCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCCCCCchhHHHHHHH
Q 017982 240 ARKLEGKIGIKVIRHRVKKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSLAEEPFIVRQVRK 318 (363)
Q Consensus 240 a~~i~~~LGi~~I~~~~kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~~~~e~~~t~~~R~ 318 (363)
+..+.+.+|+.++. ...||.+ .+..+++++|+++++++||||++.+||.+|+++|+.+|||.++....+.+.+.+.|+
T Consensus 74 ~~~~~~~~gl~~~~-~~~KP~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~~~ 152 (170)
T TIGR01668 74 AKAVEKALGIPVLP-HAVKPPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSYTILVEPLVHPDQWFIKRIWRR 152 (170)
T ss_pred HHHHHHHcCCEEEc-CCCCCChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCeEEEEccCcCCccccchhhHHH
Confidence 77777889988664 3569998 578999999999999999999998899999999999999999888888899999999
Q ss_pred HHHHHHHHHHhcCCCC
Q 017982 319 LEVTIVNRWFRRGLKP 334 (363)
Q Consensus 319 lE~~vl~~~~~~g~~~ 334 (363)
+|+.+...+.++|-..
T Consensus 153 ~~~~~~~~~~~~~~~~ 168 (170)
T TIGR01668 153 VERTVLKFLVSRGGPA 168 (170)
T ss_pred HHHHHHHHhccccCCC
Confidence 9998888776665443
No 5
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=99.78 E-value=8.1e-19 Score=169.64 Aligned_cols=171 Identities=18% Similarity=0.108 Sum_probs=132.6
Q ss_pred ccccCCCCCeEEEEcchhHHHHHHhhccccccccchhhhhhhhcCCCCCCCCcccCCccCCChHHHHHcCCCEEEEcCCc
Q 017982 113 EPRYNKDKYWTVLCTNMWWSQLKAALGQRINVEGIVSSTVVFAKDRHLALPHVTVPDIRYIDWAELQRRGFKGVVFDKDN 192 (363)
Q Consensus 113 ~~~~~~~~~k~~v~G~~~~~~~~~~~~q~ln~~Gi~~~~~~l~~~P~L~~P~~~v~sI~~Id~~~L~~~GIkaVV~DlDn 192 (363)
.++.+|.+++||++|++++ .++|..+|+...++. ...... +....-+.. ..+ +..+++||+++|.
T Consensus 99 lk~~~~~~k~Vyvig~~gi-------~~eL~~aG~~~~g~~---~~~~~~-~~~~~~~~~---~~~-d~~VgAVvvg~D~ 163 (306)
T KOG2882|consen 99 LKKRKPFGKKVYVIGEEGI-------REELDEAGFEYFGGG---PDGKDT-DGAKSFVLS---IGL-DPDVGAVVVGYDE 163 (306)
T ss_pred HHHhCcCCCeEEEecchhh-------hHHHHHcCceeecCC---CCcccc-cccccchhh---cCC-CCCCCEEEEeccc
Confidence 3344589999999999999 677778898887764 111011 000011111 122 6689999999999
Q ss_pred eeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCC-C-----CccHHHHHHHHHHhCCeEEEcccCCCch-hHHH
Q 017982 193 TLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYE-Y-----DNDASKARKLEGKIGIKVIRHRVKKPAG-TAEE 265 (363)
Q Consensus 193 TL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~-~-----dp~~~~a~~i~~~LGi~~I~~~~kKP~p-~~~~ 265 (363)
.+. |+.+..++++|+ .-| .++|+||.+...+ . ...+..++.+....|...+. .+||++ .++.
T Consensus 164 hfs-------y~KL~kA~~yLq-nP~-clflatn~D~~~p~~~~~~ipG~G~~v~av~~~t~R~P~v--~GKP~~~m~~~ 232 (306)
T KOG2882|consen 164 HFS-------YPKLMKALNYLQ-NPG-CLFLATNRDATTPPTPGVEIPGAGSFVAAVKFATGRQPIV--LGKPSTFMFEY 232 (306)
T ss_pred ccC-------HHHHHHHHHHhC-CCC-cEEEeccCccccCCCCCeeccCCccHHHHHHHHhcCCCee--cCCCCHHHHHH
Confidence 997 577888999997 445 8999999998775 2 12478889999999998764 689999 4689
Q ss_pred HHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCCCCCc
Q 017982 266 IEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSLAEE 309 (363)
Q Consensus 266 alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~~~~e 309 (363)
++++++++|++++|||||+.|||++|++.|+.|+||..+..+.|
T Consensus 233 l~~~~~i~psRt~mvGDRL~TDIlFG~~~G~~TLLvltGv~~le 276 (306)
T KOG2882|consen 233 LLEKFNIDPSRTCMVGDRLDTDILFGKNCGFKTLLVLSGVTTLE 276 (306)
T ss_pred HHHHcCCCcceEEEEcccchhhhhHhhccCcceEEEecCcCcHH
Confidence 99999999999999999999999999999999999999987744
No 6
>PRK06769 hypothetical protein; Validated
Probab=99.75 E-value=8.4e-18 Score=151.04 Aligned_cols=123 Identities=23% Similarity=0.260 Sum_probs=95.7
Q ss_pred cCCCEEEEcCCceeecC------CCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEc
Q 017982 181 RGFKGVVFDKDNTLTAP------YSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRH 254 (363)
Q Consensus 181 ~GIkaVV~DlDnTL~~~------~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~ 254 (363)
-||+++++|+||||..+ ....++|++.++|++|+ +.|++++|+||+............+...++.+|+..++.
T Consensus 2 ~~~~~~~~d~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk-~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~ 80 (173)
T PRK06769 2 TNIQAIFIDRDGTIGGDTTIHYPGSFTLFPFTKASLQKLK-ANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYL 80 (173)
T ss_pred CCCcEEEEeCCCcccCCCCCCCHHHeEECCCHHHHHHHHH-HCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEE
Confidence 38999999999999876 23457999999999998 579999999998631100000112333455677764321
Q ss_pred ---------ccCCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982 255 ---------RVKKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS 305 (363)
Q Consensus 255 ---------~~kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~ 305 (363)
...||++ .+.+++++++++|++|+||||+. +||.+|+++|+.+|+|..+.
T Consensus 81 ~~~~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~-~Di~aA~~aGi~~i~v~~g~ 140 (173)
T PRK06769 81 CPHKHGDGCECRKPSTGMLLQAAEKHGLDLTQCAVIGDRW-TDIVAAAKVNATTILVRTGA 140 (173)
T ss_pred CcCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCH-HHHHHHHHCCCeEEEEecCC
Confidence 3479999 57999999999999999999998 89999999999999998764
No 7
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=99.75 E-value=1e-17 Score=142.32 Aligned_cols=119 Identities=25% Similarity=0.388 Sum_probs=94.4
Q ss_pred CEEEEcCCceeec-------CCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEE---
Q 017982 184 KGVVFDKDNTLTA-------PYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIR--- 253 (363)
Q Consensus 184 kaVV~DlDnTL~~-------~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~--- 253 (363)
|++++|+|+||+. +....++|++.++|++|+ +.|++++|+||+.+.....-....++.+++.+|+.+..
T Consensus 1 k~~~~D~dgtL~~~~~~~~~~~~~~~~~~v~~~l~~L~-~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~ 79 (132)
T TIGR01662 1 KGVVLDLDGTLTDDVPYVDDEDERILYPEVPDALAELK-EAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDVLYA 79 (132)
T ss_pred CEEEEeCCCceecCCCCCCCHHHheeCCCHHHHHHHHH-HCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEEEEE
Confidence 6899999999983 233568999999999998 57999999999964321000024567788888887422
Q ss_pred -cccCCCch-hHHHHHHHh-CCCCCcEEEEccCCcccHHHHHHcCCeEEEEcC
Q 017982 254 -HRVKKPAG-TAEEIEKHF-GCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEP 303 (363)
Q Consensus 254 -~~~kKP~p-~~~~alk~l-gl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p 303 (363)
....||.+ .+..+++++ +++|++++||||+..+||.+|+++|+.+|||.|
T Consensus 80 ~~~~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~~i~~~~ 132 (132)
T TIGR01662 80 CPHCRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLAFILVAP 132 (132)
T ss_pred CCCCCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCeEEEeeC
Confidence 13569998 579999999 599999999999655899999999999999976
No 8
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=99.69 E-value=1.7e-16 Score=138.48 Aligned_cols=118 Identities=19% Similarity=0.334 Sum_probs=92.9
Q ss_pred CEEEEcCCceeecCCC---------CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCC--CCc-----cHHHHHHHHHHh
Q 017982 184 KGVVFDKDNTLTAPYS---------LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYE--YDN-----DASKARKLEGKI 247 (363)
Q Consensus 184 kaVV~DlDnTL~~~~~---------~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~--~dp-----~~~~a~~i~~~L 247 (363)
++++||+|+||+.... ..++|++.++|+.|+ +.|++++|+||+..... ++. ....+..+++.+
T Consensus 1 ~~~~~d~dgtl~~~~~~~~~~~~~~~~~~~g~~~~l~~Lk-~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 79 (147)
T TIGR01656 1 PALFLDRDGVINEDTVSDYPRSLDDWQLRPGAVPALLTLR-AAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQL 79 (147)
T ss_pred CeEEEeCCCceeccCCcccCCCHHHeEEcCChHHHHHHHH-HCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhC
Confidence 4789999999987543 346999999999998 57999999999863210 000 013556677888
Q ss_pred CCeE---EE--------cccCCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcC
Q 017982 248 GIKV---IR--------HRVKKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEP 303 (363)
Q Consensus 248 Gi~~---I~--------~~~kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p 303 (363)
|+.+ +. ....||.+ .+..+++.+++++++++||||+. .||.+|+++|+.+|||..
T Consensus 80 ~l~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~e~i~IGDs~-~Di~~A~~~Gi~~v~i~~ 146 (147)
T TIGR01656 80 GVAVDGVLFCPHHPADNCSCRKPKPGLILEALKRLGVDASRSLVVGDRL-RDLQAARNAGLAAVLLVD 146 (147)
T ss_pred CCceeEEEECCCCCCCCCCCCCCCHHHHHHHHHHcCCChHHEEEEcCCH-HHHHHHHHCCCCEEEecC
Confidence 8863 21 12469999 57999999999999999999996 899999999999999975
No 9
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=99.66 E-value=6.7e-16 Score=138.32 Aligned_cols=120 Identities=18% Similarity=0.241 Sum_probs=90.5
Q ss_pred CEEEEcCCceeecCC-------CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCC--CCc-----cHHHHHHHHHHhCC
Q 017982 184 KGVVFDKDNTLTAPY-------SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYE--YDN-----DASKARKLEGKIGI 249 (363)
Q Consensus 184 kaVV~DlDnTL~~~~-------~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~--~dp-----~~~~a~~i~~~LGi 249 (363)
+++++|+||||+... ...++|++.++|++|+ +.|++++|+||+.+... +.. .......++..+++
T Consensus 2 ~~~~~D~Dgtl~~~~~~~~~~~~~~~~pgv~e~L~~Lk-~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 80 (176)
T TIGR00213 2 KAIFLDRDGTINIDHGYVHEIDNFEFIDGVIDALRELK-KMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDV 80 (176)
T ss_pred CEEEEeCCCCEeCCCCCCCCHHHeEECCCHHHHHHHHH-HCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCC
Confidence 689999999998422 3457899999999998 68999999999974211 000 01222344555555
Q ss_pred e--EEEc---------------ccCCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeE-EEEcCCC
Q 017982 250 K--VIRH---------------RVKKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLT-ILTEPLS 305 (363)
Q Consensus 250 ~--~I~~---------------~~kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~T-IlV~p~~ 305 (363)
. .++. ..+||.+ .+..+++++|+++++++||||+. +||.+|+++|+.+ |+|..+.
T Consensus 81 ~~~~i~~~~~~~~~~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~-~Di~aA~~aG~~~~i~v~~g~ 154 (176)
T TIGR00213 81 DLDGIYYCPHHPEGVEEFRQVCDCRKPKPGMLLQARKELHIDMAQSYMVGDKL-EDMQAGVAAKVKTNVLVRTGK 154 (176)
T ss_pred CccEEEECCCCCcccccccCCCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCH-HHHHHHHHCCCcEEEEEecCC
Confidence 4 2211 1479999 56899999999999999999998 8999999999998 8998654
No 10
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=99.62 E-value=3e-15 Score=134.21 Aligned_cols=118 Identities=20% Similarity=0.258 Sum_probs=91.2
Q ss_pred CCCEEEEcCCceeecCCCCC-----------cchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCc----cHHHHHHHHHH
Q 017982 182 GFKGVVFDKDNTLTAPYSLT-----------LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDN----DASKARKLEGK 246 (363)
Q Consensus 182 GIkaVV~DlDnTL~~~~~~~-----------~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp----~~~~a~~i~~~ 246 (363)
-.|.+++|+||||..+.+.. ++|++.++|+.|+ +.|++++|+||+.+...... ....++.+++.
T Consensus 12 ~~k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk-~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~ 90 (166)
T TIGR01664 12 QSKVAAFDLDGTLITTRSGKVFPTSASDWRFLYPEIPAKLQELD-DEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEK 90 (166)
T ss_pred cCcEEEEeCCCceEecCCCCcccCChHHeEEecCCHHHHHHHHH-HCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHH
Confidence 46889999999998754322 5799999999998 57999999999974211000 01246778888
Q ss_pred hCCeEE--E----cccCCCch-hHHHHHHHhC--CCCCcEEEEccCC-------cccHHHHHHcCCeEEE
Q 017982 247 IGIKVI--R----HRVKKPAG-TAEEIEKHFG--CQSSQLIMVGDRP-------FTDIVYGNRNGFLTIL 300 (363)
Q Consensus 247 LGi~~I--~----~~~kKP~p-~~~~alk~lg--l~pee~vmVGDrL-------~TDI~~A~raGi~TIl 300 (363)
+|+++. . ...+||++ .+..+++++| +++++++||||+. .+||++|+++|+.++|
T Consensus 91 ~gl~~~~ii~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~~~ 160 (166)
T TIGR01664 91 LKVPIQVLAATHAGLYRKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEFKY 160 (166)
T ss_pred cCCCEEEEEecCCCCCCCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCcCC
Confidence 898742 1 12579998 5689999999 9999999999995 3699999999999876
No 11
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=99.61 E-value=3.9e-15 Score=133.58 Aligned_cols=122 Identities=18% Similarity=0.222 Sum_probs=91.7
Q ss_pred CCCEEEEcCCceeecCC--------CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCC--CCcc-----HHHHHHHHHH
Q 017982 182 GFKGVVFDKDNTLTAPY--------SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYE--YDND-----ASKARKLEGK 246 (363)
Q Consensus 182 GIkaVV~DlDnTL~~~~--------~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~--~dp~-----~~~a~~i~~~ 246 (363)
-+|+++||+|+||.... .+.++|++.++|++|+ +.|++++|+||+.+... +... ...+..+++.
T Consensus 2 ~~~~~~~d~~~t~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk-~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~ 80 (181)
T PRK08942 2 SMKAIFLDRDGVINVDSDGYVKSPDEWIPIPGSIEAIARLK-QAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLAD 80 (181)
T ss_pred CccEEEEECCCCcccCCccccCCHHHeEECCCHHHHHHHHH-HCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHH
Confidence 36899999999997422 2357899999999998 57999999999963210 0100 1223344555
Q ss_pred hCCeE--EE---------cccCCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982 247 IGIKV--IR---------HRVKKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS 305 (363)
Q Consensus 247 LGi~~--I~---------~~~kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~ 305 (363)
+|+.+ ++ ....||++ .+..+++.+|+++++++||||+. .||.+|+++|+.+|+|..+.
T Consensus 81 ~g~~f~~i~~~~~~~~~~~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~-~Di~~A~~aG~~~i~v~~g~ 150 (181)
T PRK08942 81 RGGRLDGIYYCPHHPEDGCDCRKPKPGMLLSIAERLNIDLAGSPMVGDSL-RDLQAAAAAGVTPVLVRTGK 150 (181)
T ss_pred cCCccceEEECCCCCCCCCcCCCCCHHHHHHHHHHcCCChhhEEEEeCCH-HHHHHHHHCCCeEEEEcCCC
Confidence 66531 21 13579999 57899999999999999999998 79999999999999997543
No 12
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=99.59 E-value=1e-14 Score=140.74 Aligned_cols=146 Identities=21% Similarity=0.170 Sum_probs=114.4
Q ss_pred CeEEEEcchhHHHHHHhhccccccccchhhhhhhhcCCCCCCCCcccCCccCCChHHHHHcCCCEEEEcCCceeecCCCC
Q 017982 121 YWTVLCTNMWWSQLKAALGQRINVEGIVSSTVVFAKDRHLALPHVTVPDIRYIDWAELQRRGFKGVVFDKDNTLTAPYSL 200 (363)
Q Consensus 121 ~k~~v~G~~~~~~~~~~~~q~ln~~Gi~~~~~~l~~~P~L~~P~~~v~sI~~Id~~~L~~~GIkaVV~DlDnTL~~~~~~ 200 (363)
+|+|++|+.++.+.+. ..|+...... +| .++.+|++.+|.+++
T Consensus 92 ~kv~viG~~~l~~~l~-------~~G~~~~~~~---~~----------------------~~~d~Vv~g~d~~~~----- 134 (269)
T COG0647 92 KKVYVIGEEGLKEELE-------GAGFELVDEE---EP----------------------ARVDAVVVGLDRTLT----- 134 (269)
T ss_pred CEEEEECCcchHHHHH-------hCCcEEeccC---CC----------------------CcccEEEEecCCCCC-----
Confidence 8999999999955555 3455544332 11 026678888888876
Q ss_pred CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCC-----CccHHHHHHHHHHhCCeEEEcccCCCch-hHHHHHHHhCCCC
Q 017982 201 TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEY-----DNDASKARKLEGKIGIKVIRHRVKKPAG-TAEEIEKHFGCQS 274 (363)
Q Consensus 201 ~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~-----dp~~~~a~~i~~~LGi~~I~~~~kKP~p-~~~~alk~lgl~p 274 (363)
|+...+++..+++ | ..+|.||.+.+++. ...++.+..+....|.... -.+||++ +|+.|++.++.++
T Consensus 135 --~e~l~~a~~~i~~--g-~~fI~tNpD~~~p~~~g~~pgaGai~~~~~~~tg~~~~--~~GKP~~~i~~~al~~~~~~~ 207 (269)
T COG0647 135 --YEKLAEALLAIAA--G-APFIATNPDLTVPTERGLRPGAGAIAALLEQATGREPT--VIGKPSPAIYEAALEKLGLDR 207 (269)
T ss_pred --HHHHHHHHHHHHc--C-CcEEEeCCCccccCCCCCccCcHHHHHHHHHhhCCccc--ccCCCCHHHHHHHHHHhCCCc
Confidence 4567777877763 6 78999999987752 1247888888888888763 2689999 5799999999999
Q ss_pred CcEEEEccCCcccHHHHHHcCCeEEEEcCCCCCCch
Q 017982 275 SQLIMVGDRPFTDIVYGNRNGFLTILTEPLSLAEEP 310 (363)
Q Consensus 275 ee~vmVGDrL~TDI~~A~raGi~TIlV~p~~~~~e~ 310 (363)
++++||||++.|||++|+++||.|++|..+..+.+.
T Consensus 208 ~~~~mVGD~~~TDI~~a~~~G~~t~LV~TGv~~~~~ 243 (269)
T COG0647 208 SEVLMVGDRLDTDILGAKAAGLDTLLVLTGVSSAED 243 (269)
T ss_pred ccEEEEcCCchhhHHHHHHcCCCEEEEccCCCChhh
Confidence 999999999999999999999999999999876554
No 13
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=99.58 E-value=9.5e-15 Score=130.59 Aligned_cols=122 Identities=20% Similarity=0.190 Sum_probs=95.2
Q ss_pred CEEEEcCCceeecCC----------CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCC--Cc-----cHHHHHHHHHH
Q 017982 184 KGVVFDKDNTLTAPY----------SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEY--DN-----DASKARKLEGK 246 (363)
Q Consensus 184 kaVV~DlDnTL~~~~----------~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~--dp-----~~~~a~~i~~~ 246 (363)
++++||.|+||+... ...++|++.+.|++|+ +.|++++|+||++|.... .. ....+..+++.
T Consensus 2 ~~~~~d~dg~l~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~-~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~ 80 (161)
T TIGR01261 2 KILFIDRDGTLIEEPPSDFQVDALEKLRFEKGVIPALLKLK-KAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRS 80 (161)
T ss_pred CEEEEeCCCCccccCCCccccCCHHHeeECCCHHHHHHHHH-HCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHH
Confidence 678999999998621 1247899999999998 579999999998643211 10 12345677888
Q ss_pred hCCeE--E-Ec--------ccCCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCCCC
Q 017982 247 IGIKV--I-RH--------RVKKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSLA 307 (363)
Q Consensus 247 LGi~~--I-~~--------~~kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~~~ 307 (363)
+|+.+ + .. ...||.+ .+..+++++++++++++||||+. +||.+|+++|+.+|+|.+....
T Consensus 81 ~gl~fd~ii~~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~e~l~IGD~~-~Di~~A~~aGi~~i~~~~~~~~ 152 (161)
T TIGR01261 81 QGIIFDDVLICPHFPDDNCDCRKPKIKLLEPYLKKNLIDKARSYVIGDRE-TDMQLAENLGIRGIQYDEEELN 152 (161)
T ss_pred CCCceeEEEECCCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEeCCH-HHHHHHHHCCCeEEEEChhhcC
Confidence 88873 2 11 2569998 56899999999999999999997 8999999999999999877533
No 14
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=99.53 E-value=9.4e-14 Score=126.92 Aligned_cols=123 Identities=20% Similarity=0.235 Sum_probs=98.1
Q ss_pred CCEEEEcCCceeecCCC--------CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCC-------ccHHHHHHHHHHh
Q 017982 183 FKGVVFDKDNTLTAPYS--------LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYD-------NDASKARKLEGKI 247 (363)
Q Consensus 183 IkaVV~DlDnTL~~~~~--------~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~d-------p~~~~a~~i~~~L 247 (363)
-+++++|.|+||+.... +.+.|++.+++..|+ +.|++++|+||.+|..... .....+..+++..
T Consensus 5 ~k~lflDRDGtin~d~~~yv~~~~~~~~~~g~i~al~~l~-~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~~ 83 (181)
T COG0241 5 QKALFLDRDGTINIDKGDYVDSLDDFQFIPGVIPALLKLQ-RAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILASQ 83 (181)
T ss_pred CcEEEEcCCCceecCCCcccCcHHHhccCccHHHHHHHHH-hCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHHc
Confidence 57899999999986443 357899999999998 6899999999999876421 1122344566666
Q ss_pred CCeE--EE---------cccCCCchhH-HHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCCCC
Q 017982 248 GIKV--IR---------HRVKKPAGTA-EEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSLA 307 (363)
Q Consensus 248 Gi~~--I~---------~~~kKP~p~~-~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~~~ 307 (363)
|+.+ |. ..++||.++| ..+++++++++++.+||||++ +|+++|.++|+..+++..+...
T Consensus 84 gv~id~i~~Cph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~-~Dlq~a~n~gi~~~~~~~~~~~ 154 (181)
T COG0241 84 GVKIDGILYCPHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRL-TDLQAAENAGIKGVLVLTGIGV 154 (181)
T ss_pred CCccceEEECCCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcH-HHHHHHHHCCCCceEEEcCccc
Confidence 7542 21 3689999965 899999999999999999999 9999999999999999855443
No 15
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=99.52 E-value=1.3e-13 Score=132.37 Aligned_cols=116 Identities=26% Similarity=0.338 Sum_probs=89.9
Q ss_pred cCCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCC-C----c-cHHHHHHHHHHhCCeEEEc
Q 017982 181 RGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEY-D----N-DASKARKLEGKIGIKVIRH 254 (363)
Q Consensus 181 ~GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~-d----p-~~~~a~~i~~~LGi~~I~~ 254 (363)
..+.+|+++.|..++ |+++.++++.|+ ..|. ++|+||.+..++. . + .+..+..+....|...+.
T Consensus 130 ~~~~~Vvv~~d~~~~-------y~~i~~~l~~L~-~~g~-~~i~Tn~d~~~~~~~~~~~~~~g~~~~~i~~~~g~~~~~- 199 (279)
T TIGR01452 130 ENVGAVVVGYDEHFS-------YAKLREACAHLR-EPGC-LFVATNRDPWHPLSDGSRTPGTGSLVAAIETASGRQPLV- 199 (279)
T ss_pred CCCCEEEEecCCCCC-------HHHHHHHHHHHh-cCCC-EEEEeCCCCCCCCcCCCcccChHHHHHHHHHHhCCceec-
Confidence 367888888777654 789999999997 4675 8999999864431 1 1 133444555555665542
Q ss_pred ccCCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCCCC
Q 017982 255 RVKKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSLA 307 (363)
Q Consensus 255 ~~kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~~~ 307 (363)
.+||++ .+..+++++|++|++++||||++.+||.+|+++|+.+|+|..+...
T Consensus 200 -~gKP~p~~~~~~~~~~~~~~~~~lmIGD~~~tDI~~A~~aGi~si~V~~G~~~ 252 (279)
T TIGR01452 200 -VGKPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLVLSGVSR 252 (279)
T ss_pred -cCCCCHHHHHHHHHHhCCChhhEEEECCChHHHHHHHHHcCCcEEEECCCCCC
Confidence 589999 5689999999999999999999889999999999999999876654
No 16
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=99.48 E-value=4.6e-13 Score=133.79 Aligned_cols=121 Identities=20% Similarity=0.226 Sum_probs=94.4
Q ss_pred CCEEEEcCCceeecCC----------CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCC--CCc-----cHHHHHHHHH
Q 017982 183 FKGVVFDKDNTLTAPY----------SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYE--YDN-----DASKARKLEG 245 (363)
Q Consensus 183 IkaVV~DlDnTL~~~~----------~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~--~dp-----~~~~a~~i~~ 245 (363)
.+++++|.|+||+... ...++|++.++|++|+ +.|++++|+||+++... +.. ....+..+++
T Consensus 2 ~k~l~lDrDgtl~~~~~~~y~~~~~~~~~l~pGV~e~L~~Lk-~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~ 80 (354)
T PRK05446 2 QKILFIDRDGTLIEEPPTDFQVDSLDKLAFEPGVIPALLKLQ-KAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFE 80 (354)
T ss_pred CcEEEEeCCCCccCCCCccccccCcccceECcCHHHHHHHHH-hCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHH
Confidence 4689999999998642 3467999999999998 68999999999753221 110 1234556777
Q ss_pred HhCCeE--EE---------cccCCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982 246 KIGIKV--IR---------HRVKKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS 305 (363)
Q Consensus 246 ~LGi~~--I~---------~~~kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~ 305 (363)
.+|+.+ +. ...+||.+ .+..+++.+++++++++||||+. +|+.+|+++||.+|||++..
T Consensus 81 ~~gl~fd~i~i~~~~~sd~~~~rKP~p~~l~~a~~~l~v~~~~svmIGDs~-sDi~aAk~aGi~~I~v~~~~ 151 (354)
T PRK05446 81 SQGIKFDEVLICPHFPEDNCSCRKPKTGLVEEYLAEGAIDLANSYVIGDRE-TDVQLAENMGIKGIRYARET 151 (354)
T ss_pred HcCCceeeEEEeCCcCcccCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCH-HHHHHHHHCCCeEEEEECCC
Confidence 778763 21 13679999 46888999999999999999998 89999999999999998754
No 17
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=99.47 E-value=2.3e-13 Score=122.71 Aligned_cols=98 Identities=19% Similarity=0.275 Sum_probs=83.0
Q ss_pred CCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHH
Q 017982 198 YSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEK 268 (363)
Q Consensus 198 ~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk 268 (363)
....++|++.++|++|+ +.|++++|+||+. ...++.+++.+|+. .+. .+..||++ .|..+++
T Consensus 89 ~~~~~~~~~~~~L~~L~-~~g~~~~i~Sn~~--------~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~ 159 (198)
T TIGR01428 89 LRLPPHPDVPAGLRALK-ERGYRLAILSNGS--------PAMLKSLVKHAGLDDPFDAVLSADAVRAYKPAPQVYQLALE 159 (198)
T ss_pred hcCCCCCCHHHHHHHHH-HCCCeEEEEeCCC--------HHHHHHHHHHCCChhhhheeEehhhcCCCCCCHHHHHHHHH
Confidence 34567899999999998 5799999999996 35667777888874 222 24679999 6799999
Q ss_pred HhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982 269 HFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS 305 (363)
Q Consensus 269 ~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~ 305 (363)
++|++|++++||||+. .||.+|+++||.+|||.+..
T Consensus 160 ~~~~~p~~~~~vgD~~-~Di~~A~~~G~~~i~v~r~~ 195 (198)
T TIGR01428 160 ALGVPPDEVLFVASNP-WDLGGAKKFGFKTAWVNRPG 195 (198)
T ss_pred HhCCChhhEEEEeCCH-HHHHHHHHCCCcEEEecCCC
Confidence 9999999999999999 89999999999999998754
No 18
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=99.44 E-value=1.5e-12 Score=131.24 Aligned_cols=93 Identities=14% Similarity=0.120 Sum_probs=79.4
Q ss_pred cchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHHhCC
Q 017982 202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKHFGC 272 (363)
Q Consensus 202 ~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~lgl 272 (363)
++|++.++|+.|+ +.|++++|+||+. ...++.+++.+|+. .|. ...+||++ .+..+++++|+
T Consensus 217 l~pGa~ElL~~Lk-~~GiklaIaSn~~--------~~~~~~~L~~lgL~~yFd~Iv~sddv~~~KP~Peifl~A~~~lgl 287 (381)
T PLN02575 217 LRTGSQEFVNVLM-NYKIPMALVSTRP--------RKTLENAIGSIGIRGFFSVIVAAEDVYRGKPDPEMFIYAAQLLNF 287 (381)
T ss_pred cCcCHHHHHHHHH-HCCCeEEEEeCCC--------HHHHHHHHHHcCCHHHceEEEecCcCCCCCCCHHHHHHHHHHcCC
Confidence 4678888999998 5799999999996 46778888888875 232 23579999 67899999999
Q ss_pred CCCcEEEEccCCcccHHHHHHcCCeEEEEcCC
Q 017982 273 QSSQLIMVGDRPFTDIVYGNRNGFLTILTEPL 304 (363)
Q Consensus 273 ~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~ 304 (363)
+|++|+||||+. .||++|+++||.+|+|...
T Consensus 288 ~Peecl~IGDS~-~DIeAAk~AGm~~IgV~~~ 318 (381)
T PLN02575 288 IPERCIVFGNSN-QTVEAAHDARMKCVAVASK 318 (381)
T ss_pred CcccEEEEcCCH-HHHHHHHHcCCEEEEECCC
Confidence 999999999998 7999999999999999753
No 19
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.42 E-value=7.1e-13 Score=120.92 Aligned_cols=96 Identities=18% Similarity=0.230 Sum_probs=80.7
Q ss_pred CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe------EEE--cccCCCch-hHHHHHHHh
Q 017982 200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK------VIR--HRVKKPAG-TAEEIEKHF 270 (363)
Q Consensus 200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~------~I~--~~~kKP~p-~~~~alk~l 270 (363)
...+|++.+.|+.++. . ++++|+||+. .......++.+|+. +++ .+..||++ +|+.+++++
T Consensus 98 ~~~~~~~~~~L~~l~~-~-~~l~ilTNg~--------~~~~~~~l~~~gl~~~Fd~v~~s~~~g~~KP~~~~f~~~~~~~ 167 (229)
T COG1011 98 LPDYPEALEALKELGK-K-YKLGILTNGA--------RPHQERKLRQLGLLDYFDAVFISEDVGVAKPDPEIFEYALEKL 167 (229)
T ss_pred CccChhHHHHHHHHHh-h-ccEEEEeCCC--------hHHHHHHHHHcCChhhhheEEEecccccCCCCcHHHHHHHHHc
Confidence 5678999999999985 3 7899999975 25566777777764 122 35679999 679999999
Q ss_pred CCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982 271 GCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS 305 (363)
Q Consensus 271 gl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~ 305 (363)
|++|++++||||++.+||.+|+++||.|||+....
T Consensus 168 g~~p~~~l~VgD~~~~di~gA~~~G~~~vwi~~~~ 202 (229)
T COG1011 168 GVPPEEALFVGDSLENDILGARALGMKTVWINRGG 202 (229)
T ss_pred CCCcceEEEECCChhhhhHHHHhcCcEEEEECCCC
Confidence 99999999999999999999999999999998654
No 20
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=99.41 E-value=9.2e-13 Score=120.20 Aligned_cols=97 Identities=19% Similarity=0.288 Sum_probs=81.2
Q ss_pred CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHHh
Q 017982 200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKHF 270 (363)
Q Consensus 200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~l 270 (363)
..++|++.++|++|+ +.|++++|+||+.. ..+...++.+|+. .+. .+..||++ .+..+++++
T Consensus 93 ~~~~~g~~~~L~~L~-~~g~~~~i~Tn~~~--------~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~ 163 (221)
T TIGR02253 93 LRVYPGVRDTLMELR-ESGYRLGIITDGLP--------VKQWEKLERLGVRDFFDAVITSEEEGVEKPHPKIFYAALKRL 163 (221)
T ss_pred CCCCCCHHHHHHHHH-HCCCEEEEEeCCch--------HHHHHHHHhCChHHhccEEEEeccCCCCCCCHHHHHHHHHHc
Confidence 457899999999998 57999999999962 4456667777875 222 24579999 679999999
Q ss_pred CCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982 271 GCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS 305 (363)
Q Consensus 271 gl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~ 305 (363)
|+++++++||||++.+||.+|+++|+.+|+|..+.
T Consensus 164 ~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~~~~ 198 (221)
T TIGR02253 164 GVKPEEAVMVGDRLDKDIKGAKNLGMKTVWINQGK 198 (221)
T ss_pred CCChhhEEEECCChHHHHHHHHHCCCEEEEECCCC
Confidence 99999999999998789999999999999998654
No 21
>PLN02645 phosphoglycolate phosphatase
Probab=99.41 E-value=2.4e-12 Score=125.77 Aligned_cols=162 Identities=18% Similarity=0.200 Sum_probs=107.5
Q ss_pred CCCCeEEEEcchhHHHHHHhhccccccccchhhhhhhhcCCCCCCCCcccCCccCCChHHH--HHcCCCEEEEcCCceee
Q 017982 118 KDKYWTVLCTNMWWSQLKAALGQRINVEGIVSSTVVFAKDRHLALPHVTVPDIRYIDWAEL--QRRGFKGVVFDKDNTLT 195 (363)
Q Consensus 118 ~~~~k~~v~G~~~~~~~~~~~~q~ln~~Gi~~~~~~l~~~P~L~~P~~~v~sI~~Id~~~L--~~~GIkaVV~DlDnTL~ 195 (363)
+.+++++|+|..+.. +++...|+...++. .++.... ..+...+ ....+.+|+++.|..++
T Consensus 110 ~~~~~V~viG~~~~~-------~~l~~~Gi~~~~g~--~~~~~~~---------~~~~~~~~~~~~~i~aVvvg~d~~~~ 171 (311)
T PLN02645 110 PKDKKVYVIGEEGIL-------EELELAGFQYLGGP--EDGDKKI---------ELKPGFLMEHDKDVGAVVVGFDRYIN 171 (311)
T ss_pred CCCCEEEEEcCHHHH-------HHHHHCCCEEecCc--ccccccc---------ccccccccccCCCCCEEEEecCCCCC
Confidence 456789999999883 44445566654431 1110000 0011000 02356888888888775
Q ss_pred cCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCC-----c-cHHHHHHHHHHhCCeEEEcccCCCch-hHHHHHH
Q 017982 196 APYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYD-----N-DASKARKLEGKIGIKVIRHRVKKPAG-TAEEIEK 268 (363)
Q Consensus 196 ~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~d-----p-~~~~a~~i~~~LGi~~I~~~~kKP~p-~~~~alk 268 (363)
+..+..+...|+...| .++|+||.+..++.. + .+..+..+....+...+. .+||++ .++.+++
T Consensus 172 -------~~~l~~a~~~l~~~~g-~~~i~tn~d~~~~~~~~~~~~g~g~~~~~i~~~~~~~~~~--~gKP~p~~~~~a~~ 241 (311)
T PLN02645 172 -------YYKIQYATLCIRENPG-CLFIATNRDAVTHLTDAQEWAGAGSMVGAIKGSTEREPLV--VGKPSTFMMDYLAN 241 (311)
T ss_pred -------HHHHHHHHHHHhcCCC-CEEEEeCCCCCCCCCCCCCccchHHHHHHHHHHhCCCccc--CCCChHHHHHHHHH
Confidence 3445555655542234 799999998654211 1 234566666666765542 589999 5689999
Q ss_pred HhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCCCC
Q 017982 269 HFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSLA 307 (363)
Q Consensus 269 ~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~~~ 307 (363)
++++++++++||||++.+||.+|+++|+.+|+|..+...
T Consensus 242 ~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~ilV~~G~~~ 280 (311)
T PLN02645 242 KFGIEKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTS 280 (311)
T ss_pred HcCCCcccEEEEcCCcHHHHHHHHHcCCCEEEEcCCCCC
Confidence 999999999999999989999999999999999876644
No 22
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.41 E-value=7e-13 Score=125.78 Aligned_cols=96 Identities=16% Similarity=0.223 Sum_probs=80.9
Q ss_pred CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHH
Q 017982 199 SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKH 269 (363)
Q Consensus 199 ~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~ 269 (363)
.+.+.+++.++++.|+ +.|..++|+||.+ .+.+.++..+|+. ++. .+..||+| +|+.++++
T Consensus 111 ~~~~~~~~~~~lq~lR-~~g~~l~iisN~d---------~r~~~~l~~~~l~~~fD~vv~S~e~g~~KPDp~If~~al~~ 180 (237)
T KOG3085|consen 111 AWKYLDGMQELLQKLR-KKGTILGIISNFD---------DRLRLLLLPLGLSAYFDFVVESCEVGLEKPDPRIFQLALER 180 (237)
T ss_pred CceeccHHHHHHHHHH-hCCeEEEEecCCc---------HHHHHHhhccCHHHhhhhhhhhhhhccCCCChHHHHHHHHH
Confidence 3445677779999998 6799999999997 5666777777774 221 46789999 67999999
Q ss_pred hCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCC
Q 017982 270 FGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPL 304 (363)
Q Consensus 270 lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~ 304 (363)
+|+.|++|+||||.+.+|+++|+++|+.+++|...
T Consensus 181 l~v~Pee~vhIgD~l~nD~~gA~~~G~~ailv~~~ 215 (237)
T KOG3085|consen 181 LGVKPEECVHIGDLLENDYEGARNLGWHAILVDNS 215 (237)
T ss_pred hCCChHHeEEecCccccccHhHHHcCCEEEEEccc
Confidence 99999999999999999999999999999999843
No 23
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=99.40 E-value=9.1e-13 Score=119.72 Aligned_cols=107 Identities=16% Similarity=0.062 Sum_probs=76.1
Q ss_pred CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe---------E----EE-c---ccCCCchh-
Q 017982 201 TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK---------V----IR-H---RVKKPAGT- 262 (363)
Q Consensus 201 ~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~---------~----I~-~---~~kKP~p~- 262 (363)
.++|++.+.|+.|+ +.|++++|+||+.. ...+..+++.+|+. - +. . ...||.+.
T Consensus 45 ~l~pGv~elL~~Lk-~~G~~l~I~Sn~~~-------~~~~~~~L~~~~l~~~~~~~~~~~~Fd~iv~~~~~~~~kp~~~i 116 (174)
T TIGR01685 45 TLIKEVRDVLQTLK-DAGTYLATASWNDV-------PEWAYEILGTFEITYAGKTVPMHSLFDDRIEIYKPNKAKQLEMI 116 (174)
T ss_pred EEcccHHHHHHHHH-HCCCEEEEEeCCCC-------hHHHHHHHHhCCcCCCCCcccHHHhceeeeeccCCchHHHHHHH
Confidence 47899999999998 57999999999831 25566777777764 1 11 1 11233332
Q ss_pred HHHHHHHh--CCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCCCCCchhHHHHHHHHHH
Q 017982 263 AEEIEKHF--GCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSLAEEPFIVRQVRKLEV 321 (363)
Q Consensus 263 ~~~alk~l--gl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~~~~e~~~t~~~R~lE~ 321 (363)
++.+.+.+ |++|++|+||||+. .||.+|+++|+.++++..+....+ ..+.+|+
T Consensus 117 ~~~~~~~~~~gl~p~e~l~VgDs~-~di~aA~~aGi~~i~v~~g~~~~~-----~~~~~~~ 171 (174)
T TIGR01685 117 LQKVNKVDPSVLKPAQILFFDDRT-DNVREVWGYGVTSCYCPSGMDKGT-----FKKILEM 171 (174)
T ss_pred HHHhhhcccCCCCHHHeEEEcChh-HhHHHHHHhCCEEEEcCCCccHHH-----HHHHHHH
Confidence 23343444 69999999999999 799999999999999976543312 3556665
No 24
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=99.39 E-value=8.2e-13 Score=119.40 Aligned_cols=91 Identities=19% Similarity=0.243 Sum_probs=75.7
Q ss_pred CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHHh
Q 017982 200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKHF 270 (363)
Q Consensus 200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~l 270 (363)
..++|++.++|++|+ +.|++++|+||+. ..+...++.+|+. .+. .+..||++ .+..+++++
T Consensus 104 ~~~~~g~~~~l~~L~-~~g~~~~i~Sn~~---------~~~~~~l~~~~l~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~ 173 (203)
T TIGR02252 104 WQVYPDAIKLLKDLR-ERGLILGVISNFD---------SRLRGLLEALGLLEYFDFVVTSYEVGAEKPDPKIFQEALERA 173 (203)
T ss_pred ceeCcCHHHHHHHHH-HCCCEEEEEeCCc---------hhHHHHHHHCCcHHhcceEEeecccCCCCCCHHHHHHHHHHc
Confidence 357899999999998 5799999999985 2245566777774 222 35679999 579999999
Q ss_pred CCCCCcEEEEccCCcccHHHHHHcCCeEEE
Q 017982 271 GCQSSQLIMVGDRPFTDIVYGNRNGFLTIL 300 (363)
Q Consensus 271 gl~pee~vmVGDrL~TDI~~A~raGi~TIl 300 (363)
|++|++++||||++.+||.+|+++|+.+||
T Consensus 174 ~~~~~~~~~IgD~~~~Di~~A~~aG~~~i~ 203 (203)
T TIGR02252 174 GISPEEALHIGDSLRNDYQGARAAGWRALL 203 (203)
T ss_pred CCChhHEEEECCCchHHHHHHHHcCCeeeC
Confidence 999999999999987899999999999986
No 25
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=99.39 E-value=6.1e-12 Score=119.24 Aligned_cols=127 Identities=20% Similarity=0.233 Sum_probs=96.3
Q ss_pred HHHHHcCCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCC-----ccHHHHHHHHHHhCCe
Q 017982 176 AELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYD-----NDASKARKLEGKIGIK 250 (363)
Q Consensus 176 ~~L~~~GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~d-----p~~~~a~~i~~~LGi~ 250 (363)
+.|.+.|+....-+.|-.+..+.....|+.+..++..++ .|.. +|+||.+..++.. ..+..+..+....+..
T Consensus 96 ~~l~~~g~~~~~~~~~~Vvvg~~~~~~y~~l~~a~~~l~--~g~~-~i~tN~D~~~~~~~~~~~~~G~~~~~i~~~~~~~ 172 (249)
T TIGR01457 96 EAIKEAGYVEDKEKPDYVVVGLDRQIDYEKFATATLAIR--KGAH-FIGTNGDLAIPTERGLLPGNGSLITVLEVATGVK 172 (249)
T ss_pred HHHHHcCCEecCCCCCEEEEeCCCCCCHHHHHHHHHHHH--CCCe-EEEECCCCCCCCCCCCCCCcHHHHHHHHHHhCCC
Confidence 456667765322234445555555667888888888875 3755 9999999777532 1356677777777877
Q ss_pred EEEcccCCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCCCC
Q 017982 251 VIRHRVKKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSLA 307 (363)
Q Consensus 251 ~I~~~~kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~~~ 307 (363)
.+. .+||++ .++.+++.+++++++++||||++.+||.+|+++|+.++||..+..+
T Consensus 173 ~~~--~gKP~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~v~v~~G~~~ 228 (249)
T TIGR01457 173 PVY--IGKPNAIIMEKAVEHLGTEREETLMVGDNYLTDIRAGIDAGIDTLLVHTGVTK 228 (249)
T ss_pred ccc--cCCChHHHHHHHHHHcCCCcccEEEECCCchhhHHHHHHcCCcEEEEcCCCCC
Confidence 653 579999 5689999999999999999999989999999999999999876544
No 26
>PTZ00445 p36-lilke protein; Provisional
Probab=99.38 E-value=2.9e-12 Score=119.60 Aligned_cols=127 Identities=12% Similarity=0.098 Sum_probs=101.2
Q ss_pred HHHHHcCCCEEEEcCCceeec-----CCCCC---------cchhHHHHHHHHHHhCCCeEEEEeCCCCCC-CCC------
Q 017982 176 AELQRRGFKGVVFDKDNTLTA-----PYSLT---------LWGPLSSSIEQCKSVFGHDIAVFSNSAGLY-EYD------ 234 (363)
Q Consensus 176 ~~L~~~GIkaVV~DlDnTL~~-----~~~~~---------~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~-~~d------ 234 (363)
+.|++.|||+|++|+||||+. |.+.. +.|+...|+.+|+ +.|++|+|||=++... +..
T Consensus 36 ~~L~~~GIk~Va~D~DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~-~~~I~v~VVTfSd~~~~~~~~~~~~I 114 (219)
T PTZ00445 36 DLLNECGIKVIASDFDLTMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLK-NSNIKISVVTFSDKELIPSENRPRYI 114 (219)
T ss_pred HHHHHcCCeEEEecchhhhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHH-HCCCeEEEEEccchhhccccCCccee
Confidence 679999999999999999988 77665 7999999999998 5899999999887422 100
Q ss_pred ccHHHHHHHHHHhCCe----EEE---------------cccCCCch-h--H--HHHHHHhCCCCCcEEEEccCCcccHHH
Q 017982 235 NDASKARKLEGKIGIK----VIR---------------HRVKKPAG-T--A--EEIEKHFGCQSSQLIMVGDRPFTDIVY 290 (363)
Q Consensus 235 p~~~~a~~i~~~LGi~----~I~---------------~~~kKP~p-~--~--~~alk~lgl~pee~vmVGDrL~TDI~~ 290 (363)
.....++..++..+.. -++ .+..||.+ + + +++++++|++|+|+++|.|+. ..|.+
T Consensus 115 sg~~li~~~lk~s~~~~~i~~~~~yyp~~w~~p~~y~~~gl~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~-~NVea 193 (219)
T PTZ00445 115 SGDRMVEAALKKSKCDFKIKKVYAYYPKFWQEPSDYRPLGLDAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDM-NNCKN 193 (219)
T ss_pred chHHHHHHHHHhcCccceeeeeeeeCCcccCChhhhhhhcccCCCccchHHHHHHHHHHcCCCHHHeEeecCCH-HHHHH
Confidence 1234566666644432 111 25789998 5 6 899999999999999999998 78999
Q ss_pred HHHcCCeEEEEcCC
Q 017982 291 GNRNGFLTILTEPL 304 (363)
Q Consensus 291 A~raGi~TIlV~p~ 304 (363)
|.++|+.++++.+.
T Consensus 194 A~~lGi~ai~f~~~ 207 (219)
T PTZ00445 194 ALKEGYIALHVTGN 207 (219)
T ss_pred HHHCCCEEEEcCCh
Confidence 99999999999743
No 27
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=99.38 E-value=3.5e-12 Score=104.30 Aligned_cols=107 Identities=24% Similarity=0.364 Sum_probs=86.2
Q ss_pred EEEEcCCceeecCCC-------CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE
Q 017982 185 GVVFDKDNTLTAPYS-------LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR 253 (363)
Q Consensus 185 aVV~DlDnTL~~~~~-------~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~ 253 (363)
+++||+|+||..... ..+++++.++|++|+ +.|++++|+||+. ...++.+++.+|+. .+.
T Consensus 1 ~~vfD~D~tl~~~~~~~~~~~~~~~~~~~~~~l~~l~-~~g~~i~ivS~~~--------~~~~~~~~~~~~~~~~~~~i~ 71 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIAEIEELELYPGVKEALKELK-EKGIKLALATNKS--------RREVLELLEELGLDDYFDPVI 71 (139)
T ss_pred CeEEccCCceEccCccccccccCCcCcCHHHHHHHHH-HCCCeEEEEeCch--------HHHHHHHHHHcCCchhhhhee
Confidence 378999999986443 278999999999998 5799999999996 35677777777762 121
Q ss_pred ----ccc----------------CCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEE
Q 017982 254 ----HRV----------------KKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILT 301 (363)
Q Consensus 254 ----~~~----------------kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV 301 (363)
... +||.+ .+..++++++..++++++|||+. +|+.+|+++|+.+|+|
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~igD~~-~d~~~~~~~g~~~i~v 139 (139)
T cd01427 72 TSNGAAIYYPKEGLFLGGGPFDIGKPNPDKLLAALKLLGVDPEEVLMVGDSL-NDIEMAKAAGGLGVAV 139 (139)
T ss_pred ccchhhhhcccccccccccccccCCCCHHHHHHHHHHcCCChhhEEEeCCCH-HHHHHHHHcCCceeeC
Confidence 011 17777 46889999999999999999999 8999999999999985
No 28
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=99.37 E-value=3.1e-12 Score=109.80 Aligned_cols=93 Identities=20% Similarity=0.381 Sum_probs=79.7
Q ss_pred CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHH
Q 017982 199 SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKH 269 (363)
Q Consensus 199 ~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~ 269 (363)
...++|++.++|+.|+ +.|++++|+||++ ...+...++.+|+. .+. .+..||++ .+..++++
T Consensus 75 ~~~~~~~~~~~L~~l~-~~~~~~~i~Sn~~--------~~~~~~~l~~~~~~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~ 145 (176)
T PF13419_consen 75 KLQPYPGVRELLERLK-AKGIPLVIVSNGS--------RERIERVLERLGLDDYFDEIISSDDVGSRKPDPDAYRRALEK 145 (176)
T ss_dssp GEEESTTHHHHHHHHH-HTTSEEEEEESSE--------HHHHHHHHHHTTHGGGCSEEEEGGGSSSSTTSHHHHHHHHHH
T ss_pred ccchhhhhhhhhhhcc-cccceeEEeecCC--------cccccccccccccccccccccccchhhhhhhHHHHHHHHHHH
Confidence 3457899999999998 5799999999996 36677888888875 232 34579998 57999999
Q ss_pred hCCCCCcEEEEccCCcccHHHHHHcCCeEEEE
Q 017982 270 FGCQSSQLIMVGDRPFTDIVYGNRNGFLTILT 301 (363)
Q Consensus 270 lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV 301 (363)
+|++|++++||||+. .|+.+|+++|+.||+|
T Consensus 146 ~~~~p~~~~~vgD~~-~d~~~A~~~G~~~i~v 176 (176)
T PF13419_consen 146 LGIPPEEILFVGDSP-SDVEAAKEAGIKTIWV 176 (176)
T ss_dssp HTSSGGGEEEEESSH-HHHHHHHHTTSEEEEE
T ss_pred cCCCcceEEEEeCCH-HHHHHHHHcCCeEEeC
Confidence 999999999999999 9999999999999997
No 29
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=99.37 E-value=4.1e-12 Score=112.16 Aligned_cols=108 Identities=14% Similarity=0.184 Sum_probs=84.7
Q ss_pred CCEEEEcCCceeecC---CCCC--------cchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeE
Q 017982 183 FKGVVFDKDNTLTAP---YSLT--------LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV 251 (363)
Q Consensus 183 IkaVV~DlDnTL~~~---~~~~--------~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~ 251 (363)
+++|++|+|+||..- +... +.++ .+|++|+ +.|++++|+||... ..+..+++.+|+..
T Consensus 1 ~~~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~~~--~~i~~Lk-~~G~~i~IvTn~~~--------~~~~~~l~~~gi~~ 69 (154)
T TIGR01670 1 IRLLILDVDGVLTDGKIYYTNNGEEIKAFNVRDG--YGIRCAL-KSGIEVAIITGRKA--------KLVEDRCKTLGITH 69 (154)
T ss_pred CeEEEEeCceeEEcCeEEECCCCcEEEEEechhH--HHHHHHH-HCCCEEEEEECCCC--------HHHHHHHHHcCCCE
Confidence 578999999999861 1111 2222 2788998 57999999999962 56788899999985
Q ss_pred EEcccCCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCC
Q 017982 252 IRHRVKKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPL 304 (363)
Q Consensus 252 I~~~~kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~ 304 (363)
++. ..||.+ .+.++++++|+++++++||||+. +|+.+++.+|+. +.|.+.
T Consensus 70 ~~~-~~~~k~~~~~~~~~~~~~~~~~~~~vGDs~-~D~~~~~~ag~~-~~v~~~ 120 (154)
T TIGR01670 70 LYQ-GQSNKLIAFSDILEKLALAPENVAYIGDDL-IDWPVMEKVGLS-VAVADA 120 (154)
T ss_pred EEe-cccchHHHHHHHHHHcCCCHHHEEEECCCH-HHHHHHHHCCCe-EecCCc
Confidence 543 346776 56889999999999999999998 899999999996 777543
No 30
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=99.36 E-value=3.1e-12 Score=115.99 Aligned_cols=112 Identities=12% Similarity=0.135 Sum_probs=86.7
Q ss_pred HHcCCCEEEEcCCceeecCC------CCCcchhHH---HHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCC
Q 017982 179 QRRGFKGVVFDKDNTLTAPY------SLTLWGPLS---SSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGI 249 (363)
Q Consensus 179 ~~~GIkaVV~DlDnTL~~~~------~~~~~p~v~---e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi 249 (363)
+..++|.+++|+||||+.+. .....+... ..++.|+ +.|++++|+||.. ...+..+++.+|+
T Consensus 17 ~~~~ikli~~D~Dgtl~~~~i~~~~~~~~~~~~~~~d~~~i~~L~-~~Gi~v~I~T~~~--------~~~v~~~l~~lgl 87 (183)
T PRK09484 17 KAENIRLLICDVDGVFSDGLIYMGNNGEELKAFNVRDGYGIRCLL-TSGIEVAIITGRK--------SKLVEDRMTTLGI 87 (183)
T ss_pred HhhCceEEEEcCCeeeecCEEEEcCCCCEEEEEeccchHHHHHHH-HCCCEEEEEeCCC--------cHHHHHHHHHcCC
Confidence 35689999999999998641 111111111 4677887 5799999999996 3678889999999
Q ss_pred eEEEcccCCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEc
Q 017982 250 KVIRHRVKKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTE 302 (363)
Q Consensus 250 ~~I~~~~kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~ 302 (363)
..++. ..++.+ .+..+++++|+++++++||||+. .|+.+++++|+. +.|.
T Consensus 88 ~~~f~-g~~~k~~~l~~~~~~~gl~~~ev~~VGDs~-~D~~~a~~aG~~-~~v~ 138 (183)
T PRK09484 88 THLYQ-GQSNKLIAFSDLLEKLAIAPEQVAYIGDDL-IDWPVMEKVGLS-VAVA 138 (183)
T ss_pred ceeec-CCCcHHHHHHHHHHHhCCCHHHEEEECCCH-HHHHHHHHCCCe-EecC
Confidence 86654 234444 57899999999999999999998 899999999998 4454
No 31
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=99.35 E-value=3.3e-12 Score=120.49 Aligned_cols=97 Identities=13% Similarity=0.091 Sum_probs=82.4
Q ss_pred CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHH
Q 017982 199 SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKH 269 (363)
Q Consensus 199 ~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~ 269 (363)
...++|++.+.|+.|+ +.|++++|+||+. ...++.+++.+|+. .+. ....||+| .+..++++
T Consensus 106 ~~~l~pgv~e~L~~L~-~~g~~l~I~Tn~~--------~~~~~~~l~~~gl~~~Fd~iv~~~~~~~~KP~p~~~~~a~~~ 176 (248)
T PLN02770 106 QLKPLNGLYKLKKWIE-DRGLKRAAVTNAP--------RENAELMISLLGLSDFFQAVIIGSECEHAKPHPDPYLKALEV 176 (248)
T ss_pred cCCcCccHHHHHHHHH-HcCCeEEEEeCCC--------HHHHHHHHHHcCChhhCcEEEecCcCCCCCCChHHHHHHHHH
Confidence 3457899999999998 5799999999996 36778888888875 222 23579999 67999999
Q ss_pred hCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982 270 FGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS 305 (363)
Q Consensus 270 lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~ 305 (363)
+|++|++++||||+. .||++|+++|+.+|+|..+.
T Consensus 177 ~~~~~~~~l~vgDs~-~Di~aA~~aGi~~i~v~~g~ 211 (248)
T PLN02770 177 LKVSKDHTFVFEDSV-SGIKAGVAAGMPVVGLTTRN 211 (248)
T ss_pred hCCChhHEEEEcCCH-HHHHHHHHCCCEEEEEeCCC
Confidence 999999999999999 89999999999999997543
No 32
>PLN02940 riboflavin kinase
Probab=99.35 E-value=3.9e-12 Score=127.98 Aligned_cols=94 Identities=21% Similarity=0.236 Sum_probs=76.3
Q ss_pred CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHH-HhCCe----EEE----cccCCCch-hHHHHHHHh
Q 017982 201 TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEG-KIGIK----VIR----HRVKKPAG-TAEEIEKHF 270 (363)
Q Consensus 201 ~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~-~LGi~----~I~----~~~kKP~p-~~~~alk~l 270 (363)
.++|++.+.|+.|+ +.|++++|+||+. ...+...++ .+|+. .+. ....||++ .+..+++++
T Consensus 93 ~l~pGv~elL~~Lk-~~g~~l~IvTn~~--------~~~~~~~l~~~~gl~~~Fd~ii~~d~v~~~KP~p~~~~~a~~~l 163 (382)
T PLN02940 93 KALPGANRLIKHLK-SHGVPMALASNSP--------RANIEAKISCHQGWKESFSVIVGGDEVEKGKPSPDIFLEAAKRL 163 (382)
T ss_pred CCCcCHHHHHHHHH-HCCCcEEEEeCCc--------HHHHHHHHHhccChHhhCCEEEehhhcCCCCCCHHHHHHHHHHc
Confidence 46788999999998 5799999999996 244444444 56653 332 23579999 579999999
Q ss_pred CCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCC
Q 017982 271 GCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPL 304 (363)
Q Consensus 271 gl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~ 304 (363)
|++|++|+||||+. .||.+|+++||.+|+|..+
T Consensus 164 gv~p~~~l~VGDs~-~Di~aA~~aGi~~I~v~~g 196 (382)
T PLN02940 164 NVEPSNCLVIEDSL-PGVMAGKAAGMEVIAVPSI 196 (382)
T ss_pred CCChhHEEEEeCCH-HHHHHHHHcCCEEEEECCC
Confidence 99999999999999 7999999999999999754
No 33
>PRK11587 putative phosphatase; Provisional
Probab=99.34 E-value=4.7e-12 Score=116.51 Aligned_cols=96 Identities=16% Similarity=0.182 Sum_probs=78.1
Q ss_pred CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe---EE-E---cccCCCch-hHHHHHHHh
Q 017982 199 SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK---VI-R---HRVKKPAG-TAEEIEKHF 270 (363)
Q Consensus 199 ~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~---~I-~---~~~kKP~p-~~~~alk~l 270 (363)
...++|++.++|+.|+ +.|++++|+||+.. ..+...++..++. .+ . ....||+| .+..+++++
T Consensus 81 ~~~~~pg~~e~L~~L~-~~g~~~~ivTn~~~--------~~~~~~l~~~~l~~~~~i~~~~~~~~~KP~p~~~~~~~~~~ 151 (218)
T PRK11587 81 GITALPGAIALLNHLN-KLGIPWAIVTSGSV--------PVASARHKAAGLPAPEVFVTAERVKRGKPEPDAYLLGAQLL 151 (218)
T ss_pred CceeCcCHHHHHHHHH-HcCCcEEEEcCCCc--------hHHHHHHHhcCCCCccEEEEHHHhcCCCCCcHHHHHHHHHc
Confidence 3457899999999998 57999999999962 3345555666654 22 2 23579999 578999999
Q ss_pred CCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCC
Q 017982 271 GCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPL 304 (363)
Q Consensus 271 gl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~ 304 (363)
|++|++++||||+. .||.+|+++|+.+|+|...
T Consensus 152 g~~p~~~l~igDs~-~di~aA~~aG~~~i~v~~~ 184 (218)
T PRK11587 152 GLAPQECVVVEDAP-AGVLSGLAAGCHVIAVNAP 184 (218)
T ss_pred CCCcccEEEEecch-hhhHHHHHCCCEEEEECCC
Confidence 99999999999998 8999999999999999743
No 34
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=99.34 E-value=4.7e-12 Score=116.55 Aligned_cols=99 Identities=12% Similarity=0.150 Sum_probs=82.5
Q ss_pred CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeE----EE----cccCCCch-hHHHHHHH
Q 017982 199 SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV----IR----HRVKKPAG-TAEEIEKH 269 (363)
Q Consensus 199 ~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~----I~----~~~kKP~p-~~~~alk~ 269 (363)
...++|++.++|+.|+ +.|++++|+||+. ...++.+++.+|+.. +. ....||++ .+..+++.
T Consensus 90 ~~~~~~g~~~~l~~l~-~~g~~~~i~S~~~--------~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~ 160 (222)
T PRK10826 90 TRPLLPGVREALALCK-AQGLKIGLASASP--------LHMLEAVLTMFDLRDYFDALASAEKLPYSKPHPEVYLNCAAK 160 (222)
T ss_pred CCCCCCCHHHHHHHHH-HCCCeEEEEeCCc--------HHHHHHHHHhCcchhcccEEEEcccCCCCCCCHHHHHHHHHH
Confidence 3568999999999998 5799999999986 356677788888752 21 23579998 67999999
Q ss_pred hCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCCCC
Q 017982 270 FGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSLA 307 (363)
Q Consensus 270 lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~~~ 307 (363)
+|++|++|+||||+. .||.+|+++|+.+|+|......
T Consensus 161 ~~~~~~~~~~igDs~-~Di~aA~~aG~~~i~v~~~~~~ 197 (222)
T PRK10826 161 LGVDPLTCVALEDSF-NGMIAAKAARMRSIVVPAPEQQ 197 (222)
T ss_pred cCCCHHHeEEEcCCh-hhHHHHHHcCCEEEEecCCccC
Confidence 999999999999999 8999999999999999855433
No 35
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=99.33 E-value=4.8e-12 Score=118.82 Aligned_cols=97 Identities=16% Similarity=0.098 Sum_probs=80.3
Q ss_pred CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe-----EEE----cccCCCch-hHHHHHH
Q 017982 199 SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK-----VIR----HRVKKPAG-TAEEIEK 268 (363)
Q Consensus 199 ~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~-----~I~----~~~kKP~p-~~~~alk 268 (363)
...++|++.++|+.|+ +.|++++|+||+. ...++.+++.+|+. .|. ....||+| .+..+++
T Consensus 97 ~~~~~pg~~e~L~~L~-~~g~~l~IvT~~~--------~~~~~~~l~~~gl~~~f~d~ii~~~~~~~~KP~p~~~~~a~~ 167 (253)
T TIGR01422 97 YSSPIPGVIEVIAYLR-ARGIKIGSTTGYT--------REMMDVVAPEAALQGYRPDYNVTTDDVPAGRPAPWMALKNAI 167 (253)
T ss_pred cCccCCCHHHHHHHHH-HCCCeEEEECCCc--------HHHHHHHHHHHHhcCCCCceEEccccCCCCCCCHHHHHHHHH
Confidence 3467899999999998 5799999999996 35666777766653 222 23679999 6789999
Q ss_pred HhCCC-CCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982 269 HFGCQ-SSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS 305 (363)
Q Consensus 269 ~lgl~-pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~ 305 (363)
++|+. |++++||||+. .||.+|+++||.+|+|..+.
T Consensus 168 ~l~~~~~~~~l~IGDs~-~Di~aA~~aGi~~i~v~~g~ 204 (253)
T TIGR01422 168 ELGVYDVAACVKVGDTV-PDIEEGRNAGMWTVGLILSS 204 (253)
T ss_pred HcCCCCchheEEECCcH-HHHHHHHHCCCeEEEEecCC
Confidence 99995 99999999999 89999999999999998664
No 36
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=99.33 E-value=7.6e-12 Score=113.61 Aligned_cols=97 Identities=19% Similarity=0.238 Sum_probs=81.4
Q ss_pred CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHH
Q 017982 199 SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKH 269 (363)
Q Consensus 199 ~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~ 269 (363)
...++|++.+.|++|+ +.|++++|+||+. ...+..+++.+|+. .+. ....||.+ .+..++++
T Consensus 73 ~~~~~~g~~~~L~~L~-~~g~~~~i~Sn~~--------~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~ 143 (205)
T TIGR01454 73 EVEVFPGVPELLAELR-ADGVGTAIATGKS--------GPRARSLLEALGLLPLFDHVIGSDEVPRPKPAPDIVREALRL 143 (205)
T ss_pred ccccCCCHHHHHHHHH-HCCCeEEEEeCCc--------hHHHHHHHHHcCChhheeeEEecCcCCCCCCChHHHHHHHHH
Confidence 4567999999999998 5799999999996 35577778888874 222 23579998 57899999
Q ss_pred hCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982 270 FGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS 305 (363)
Q Consensus 270 lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~ 305 (363)
+|+++++++||||+. .||.+|+++|+.+|+|.-+.
T Consensus 144 ~~~~~~~~l~igD~~-~Di~aA~~~Gi~~i~~~~g~ 178 (205)
T TIGR01454 144 LDVPPEDAVMVGDAV-TDLASARAAGTATVAALWGE 178 (205)
T ss_pred cCCChhheEEEcCCH-HHHHHHHHcCCeEEEEEecC
Confidence 999999999999998 89999999999999997554
No 37
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=99.32 E-value=8.1e-12 Score=115.83 Aligned_cols=95 Identities=17% Similarity=0.192 Sum_probs=82.3
Q ss_pred CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEE----E----cccCCCch-hHHHHHHHhC
Q 017982 201 TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVI----R----HRVKKPAG-TAEEIEKHFG 271 (363)
Q Consensus 201 ~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I----~----~~~kKP~p-~~~~alk~lg 271 (363)
.++|++.+.|..|+ ..|++++|+||+. ...+..+++.+|+... . ....||+| .+..+++.+|
T Consensus 89 ~~~~gv~e~L~~L~-~~g~~l~i~T~k~--------~~~~~~~l~~~gl~~~F~~i~g~~~~~~~KP~P~~l~~~~~~~~ 159 (220)
T COG0546 89 RLFPGVKELLAALK-SAGYKLGIVTNKP--------ERELDILLKALGLADYFDVIVGGDDVPPPKPDPEPLLLLLEKLG 159 (220)
T ss_pred ccCCCHHHHHHHHH-hCCCeEEEEeCCc--------HHHHHHHHHHhCCccccceEEcCCCCCCCCcCHHHHHHHHHHhC
Confidence 57999999999998 6899999999996 4678889999998632 2 24679999 4688999999
Q ss_pred CCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982 272 CQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS 305 (363)
Q Consensus 272 l~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~ 305 (363)
++|++++||||+. .||++|+++|+.+|+|..+.
T Consensus 160 ~~~~~~l~VGDs~-~Di~aA~~Ag~~~v~v~~g~ 192 (220)
T COG0546 160 LDPEEALMVGDSL-NDILAAKAAGVPAVGVTWGY 192 (220)
T ss_pred CChhheEEECCCH-HHHHHHHHcCCCEEEEECCC
Confidence 9988999999999 79999999999999998654
No 38
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=99.31 E-value=9.7e-12 Score=112.63 Aligned_cols=96 Identities=19% Similarity=0.279 Sum_probs=81.0
Q ss_pred CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHHh
Q 017982 200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKHF 270 (363)
Q Consensus 200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~l 270 (363)
..++|++.++|+.|+ +.|++++|+||+. ...++.+++.+|+. .+. ....||+| .+..+++++
T Consensus 84 ~~~~~g~~~~L~~l~-~~g~~~~i~S~~~--------~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~p~~~~~~~~~~ 154 (213)
T TIGR01449 84 TSVFPGVEATLGALR-AKGLRLGLVTNKP--------TPLARPLLELLGLAKYFSVLIGGDSLAQRKPHPDPLLLAAERL 154 (213)
T ss_pred CccCCCHHHHHHHHH-HCCCeEEEEeCCC--------HHHHHHHHHHcCcHhhCcEEEecCCCCCCCCChHHHHHHHHHc
Confidence 457899999999998 5799999999996 35677888888874 222 23469998 679999999
Q ss_pred CCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982 271 GCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS 305 (363)
Q Consensus 271 gl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~ 305 (363)
|++|++++||||+. .|+.+|+++|+.+|+|..+.
T Consensus 155 ~~~~~~~~~igDs~-~d~~aa~~aG~~~i~v~~g~ 188 (213)
T TIGR01449 155 GVAPQQMVYVGDSR-VDIQAARAAGCPSVLLTYGY 188 (213)
T ss_pred CCChhHeEEeCCCH-HHHHHHHHCCCeEEEEccCC
Confidence 99999999999997 89999999999999997544
No 39
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=99.31 E-value=9e-12 Score=113.95 Aligned_cols=96 Identities=17% Similarity=0.165 Sum_probs=80.3
Q ss_pred CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe------EEE----cccCCCch-hHHHHHH
Q 017982 200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK------VIR----HRVKKPAG-TAEEIEK 268 (363)
Q Consensus 200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~------~I~----~~~kKP~p-~~~~alk 268 (363)
..++|++.++|+.|+ +.|++++|+||+. ...++.+++.+|+. .+. ...+||+| .+..+++
T Consensus 86 ~~l~~G~~~~L~~L~-~~g~~~~ivT~~~--------~~~~~~~l~~~~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~ 156 (220)
T TIGR03351 86 PVALPGAEEAFRSLR-SSGIKVALTTGFD--------RDTAERLLEKLGWTVGDDVDAVVCPSDVAAGRPAPDLILRAME 156 (220)
T ss_pred CccCCCHHHHHHHHH-HCCCEEEEEeCCc--------hHHHHHHHHHhhhhhhccCCEEEcCCcCCCCCCCHHHHHHHHH
Confidence 468999999999998 5799999999996 35667777777764 122 23579999 6789999
Q ss_pred HhCCC-CCcEEEEccCCcccHHHHHHcCCeE-EEEcCCC
Q 017982 269 HFGCQ-SSQLIMVGDRPFTDIVYGNRNGFLT-ILTEPLS 305 (363)
Q Consensus 269 ~lgl~-pee~vmVGDrL~TDI~~A~raGi~T-IlV~p~~ 305 (363)
++|+. |++++||||+. +||.+|+++||.+ |+|..+.
T Consensus 157 ~~~~~~~~~~~~igD~~-~Di~aa~~aG~~~~i~~~~g~ 194 (220)
T TIGR03351 157 LTGVQDVQSVAVAGDTP-NDLEAGINAGAGAVVGVLTGA 194 (220)
T ss_pred HcCCCChhHeEEeCCCH-HHHHHHHHCCCCeEEEEecCC
Confidence 99997 79999999998 8999999999999 8997654
No 40
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=99.31 E-value=7.9e-12 Score=119.64 Aligned_cols=94 Identities=14% Similarity=0.116 Sum_probs=80.7
Q ss_pred CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHHh
Q 017982 200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKHF 270 (363)
Q Consensus 200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~l 270 (363)
..++|++.++|+.|+ ..|++++|+||+. ...+..+++.+|+. .+. ....||+| .+..+++++
T Consensus 108 ~~l~pg~~e~L~~L~-~~g~~l~I~Tn~~--------~~~~~~~l~~~gl~~~Fd~ii~~~d~~~~KP~Pe~~~~a~~~l 178 (260)
T PLN03243 108 YRLRPGSREFVQALK-KHEIPIAVASTRP--------RRYLERAIEAVGMEGFFSVVLAAEDVYRGKPDPEMFMYAAERL 178 (260)
T ss_pred cccCCCHHHHHHHHH-HCCCEEEEEeCcC--------HHHHHHHHHHcCCHhhCcEEEecccCCCCCCCHHHHHHHHHHh
Confidence 457899999999998 5799999999996 36677888888875 222 23579999 679999999
Q ss_pred CCCCCcEEEEccCCcccHHHHHHcCCeEEEEcC
Q 017982 271 GCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEP 303 (363)
Q Consensus 271 gl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p 303 (363)
|++|++|+||||+. .||.+|+++||.+|+|..
T Consensus 179 ~~~p~~~l~IgDs~-~Di~aA~~aG~~~i~v~g 210 (260)
T PLN03243 179 GFIPERCIVFGNSN-SSVEAAHDGCMKCVAVAG 210 (260)
T ss_pred CCChHHeEEEcCCH-HHHHHHHHcCCEEEEEec
Confidence 99999999999998 899999999999999973
No 41
>PRK09449 dUMP phosphatase; Provisional
Probab=99.31 E-value=9.1e-12 Score=114.23 Aligned_cols=95 Identities=18% Similarity=0.204 Sum_probs=77.5
Q ss_pred CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHHh
Q 017982 200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKHF 270 (363)
Q Consensus 200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~l 270 (363)
..++|++.+.|+.|+ + |++++|+||+. ...+...++.+|+. .+. .+..||++ .+..+++++
T Consensus 94 ~~~~~g~~~~L~~L~-~-~~~~~i~Tn~~--------~~~~~~~l~~~~l~~~fd~v~~~~~~~~~KP~p~~~~~~~~~~ 163 (224)
T PRK09449 94 CTPLPGAVELLNALR-G-KVKMGIITNGF--------TELQQVRLERTGLRDYFDLLVISEQVGVAKPDVAIFDYALEQM 163 (224)
T ss_pred CccCccHHHHHHHHH-h-CCeEEEEeCCc--------HHHHHHHHHhCChHHHcCEEEEECccCCCCCCHHHHHHHHHHc
Confidence 457899999999998 4 79999999986 25566677777764 222 24579999 679999999
Q ss_pred CCC-CCcEEEEccCCcccHHHHHHcCCeEEEEcCC
Q 017982 271 GCQ-SSQLIMVGDRPFTDIVYGNRNGFLTILTEPL 304 (363)
Q Consensus 271 gl~-pee~vmVGDrL~TDI~~A~raGi~TIlV~p~ 304 (363)
|+. +++++||||+...||.+|+++|+.+|+|...
T Consensus 164 ~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~ 198 (224)
T PRK09449 164 GNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAH 198 (224)
T ss_pred CCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCC
Confidence 985 5899999999866999999999999999743
No 42
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=99.31 E-value=1.4e-11 Score=108.31 Aligned_cols=91 Identities=22% Similarity=0.320 Sum_probs=74.9
Q ss_pred CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHHh
Q 017982 200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKHF 270 (363)
Q Consensus 200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~l 270 (363)
..++|++.++|+.|+ +.|++++|+||+.. .. ..+...+|+. .+. .+..||++ .+..+++++
T Consensus 84 ~~~~~g~~~~l~~l~-~~g~~~~i~Tn~~~--------~~-~~~~~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~ 153 (183)
T TIGR01509 84 LKPLPGVEPLLEALR-ARGKKLALLTNSPR--------DH-AVLVQELGLRDLFDVVIFSGDVGRGKPDPDIYLLALKKL 153 (183)
T ss_pred CccCcCHHHHHHHHH-HCCCeEEEEeCCch--------HH-HHHHHhcCCHHHCCEEEEcCCCCCCCCCHHHHHHHHHHc
Confidence 467899999999998 57999999999962 22 4444447764 222 25689998 579999999
Q ss_pred CCCCCcEEEEccCCcccHHHHHHcCCeEEEE
Q 017982 271 GCQSSQLIMVGDRPFTDIVYGNRNGFLTILT 301 (363)
Q Consensus 271 gl~pee~vmVGDrL~TDI~~A~raGi~TIlV 301 (363)
|++|++++||||+. .||.+|+++|+.+|+|
T Consensus 154 ~~~~~~~~~vgD~~-~di~aA~~~G~~~i~v 183 (183)
T TIGR01509 154 GLKPEECLFVDDSP-AGIEAAKAAGMHTVLV 183 (183)
T ss_pred CCCcceEEEEcCCH-HHHHHHHHcCCEEEeC
Confidence 99999999999999 7999999999999986
No 43
>PRK10444 UMP phosphatase; Provisional
Probab=99.30 E-value=2.3e-11 Score=115.74 Aligned_cols=112 Identities=20% Similarity=0.184 Sum_probs=86.2
Q ss_pred CEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCC--CccHHHHHHHHHHhCCeEEEcccCCCch
Q 017982 184 KGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEY--DNDASKARKLEGKIGIKVIRHRVKKPAG 261 (363)
Q Consensus 184 kaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~--dp~~~~a~~i~~~LGi~~I~~~~kKP~p 261 (363)
.+|+++.|.+++ |+.+..+...++ .| ..+|+||.+...+. ...+..+..+....|...+. .+||++
T Consensus 110 ~~Vvvg~~~~~~-------~~~l~~a~~~l~--~g-~~~i~~n~D~~~~g~~~~~G~~~~~l~~~~g~~~~~--~gKP~~ 177 (248)
T PRK10444 110 DFVIVGETRSYN-------WDMMHKAAYFVA--NG-ARFIATNPDTHGRGFYPACGALCAGIEKISGRKPFY--VGKPSP 177 (248)
T ss_pred CEEEEeCCCCCC-------HHHHHHHHHHHH--CC-CEEEEECCCCCCCCCcCcHHHHHHHHHHHhCCCccc--cCCCCH
Confidence 467666665443 556666666664 25 67999998865432 12367778888888886543 479999
Q ss_pred -hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCCCC
Q 017982 262 -TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSLA 307 (363)
Q Consensus 262 -~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~~~ 307 (363)
.++.+++.+++++++++||||++.|||.+|+++|+.+++|..+..+
T Consensus 178 ~~~~~~~~~~~~~~~~~v~IGD~~~tDi~~A~~~G~~~vlV~~G~~~ 224 (248)
T PRK10444 178 WIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVST 224 (248)
T ss_pred HHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHcCCCEEEECCCCCC
Confidence 5689999999999999999999989999999999999999877655
No 44
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=99.30 E-value=1.2e-11 Score=112.98 Aligned_cols=96 Identities=17% Similarity=0.197 Sum_probs=81.0
Q ss_pred CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeE----EE----cccCCCch-hHHHHHHHh
Q 017982 200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV----IR----HRVKKPAG-TAEEIEKHF 270 (363)
Q Consensus 200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~----I~----~~~kKP~p-~~~~alk~l 270 (363)
..++|++.++|+.|+ +.|++++|+||+. ...+..+++.+|+.. +. ....||.+ .+.++++++
T Consensus 81 ~~~~~g~~~~l~~L~-~~g~~~~i~S~~~--------~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~p~~~~~~~~~~ 151 (214)
T PRK13288 81 VTEYETVYETLKTLK-KQGYKLGIVTTKM--------RDTVEMGLKLTGLDEFFDVVITLDDVEHAKPDPEPVLKALELL 151 (214)
T ss_pred cccCcCHHHHHHHHH-HCCCeEEEEeCCC--------HHHHHHHHHHcCChhceeEEEecCcCCCCCCCcHHHHHHHHHc
Confidence 347899999999998 5799999999996 356777888888862 21 13479998 578999999
Q ss_pred CCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982 271 GCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS 305 (363)
Q Consensus 271 gl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~ 305 (363)
+++|++++||||+. .||.+|+++|+.+|+|..+.
T Consensus 152 ~~~~~~~~~iGDs~-~Di~aa~~aG~~~i~v~~g~ 185 (214)
T PRK13288 152 GAKPEEALMVGDNH-HDILAGKNAGTKTAGVAWTI 185 (214)
T ss_pred CCCHHHEEEECCCH-HHHHHHHHCCCeEEEEcCCC
Confidence 99999999999998 89999999999999997554
No 45
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=99.30 E-value=1.3e-11 Score=115.04 Aligned_cols=94 Identities=20% Similarity=0.206 Sum_probs=80.3
Q ss_pred CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEE-----E---cccCCCch-hHHHHHHHhC
Q 017982 201 TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVI-----R---HRVKKPAG-TAEEIEKHFG 271 (363)
Q Consensus 201 ~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I-----~---~~~kKP~p-~~~~alk~lg 271 (363)
.+.|++.++|..|+ ..|+.++++||+. ...++.++..+|+... . ....||+| .|..++++||
T Consensus 86 ~~~pGv~~~l~~L~-~~~i~~avaS~s~--------~~~~~~~L~~~gl~~~f~~~v~~~dv~~~KP~Pd~yL~Aa~~Lg 156 (221)
T COG0637 86 KPIPGVVELLEQLK-ARGIPLAVASSSP--------RRAAERVLARLGLLDYFDVIVTADDVARGKPAPDIYLLAAERLG 156 (221)
T ss_pred CCCccHHHHHHHHH-hcCCcEEEecCCh--------HHHHHHHHHHccChhhcchhccHHHHhcCCCCCHHHHHHHHHcC
Confidence 46789999999998 5789999999996 3678888888887521 1 23569999 6899999999
Q ss_pred CCCCcEEEEccCCcccHHHHHHcCCeEEEEcCC
Q 017982 272 CQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPL 304 (363)
Q Consensus 272 l~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~ 304 (363)
++|++|++|.|+. ..|++|+++||.+|.|...
T Consensus 157 v~P~~CvviEDs~-~Gi~Aa~aAGm~vv~v~~~ 188 (221)
T COG0637 157 VDPEECVVVEDSP-AGIQAAKAAGMRVVGVPAG 188 (221)
T ss_pred CChHHeEEEecch-hHHHHHHHCCCEEEEecCC
Confidence 9999999999999 8999999999999999863
No 46
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=99.30 E-value=5.5e-12 Score=111.66 Aligned_cols=90 Identities=19% Similarity=0.186 Sum_probs=74.7
Q ss_pred CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHHhC
Q 017982 201 TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKHFG 271 (363)
Q Consensus 201 ~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~lg 271 (363)
.++|++.++|+.|+ +.|++++|+||+.. ...+++.+|+. .+. .+..||.+ .+..++++++
T Consensus 87 ~~~pg~~~~L~~L~-~~g~~~~i~s~~~~----------~~~~l~~~~l~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~ 155 (185)
T TIGR01990 87 DVLPGIKNLLDDLK-KNNIKIALASASKN----------APTVLEKLGLIDYFDAIVDPAEIKKGKPDPEIFLAAAEGLG 155 (185)
T ss_pred ccCccHHHHHHHHH-HCCCeEEEEeCCcc----------HHHHHHhcCcHhhCcEEEehhhcCCCCCChHHHHHHHHHcC
Confidence 57899999999998 57999999999741 23456777764 222 24579999 5799999999
Q ss_pred CCCCcEEEEccCCcccHHHHHHcCCeEEEEc
Q 017982 272 CQSSQLIMVGDRPFTDIVYGNRNGFLTILTE 302 (363)
Q Consensus 272 l~pee~vmVGDrL~TDI~~A~raGi~TIlV~ 302 (363)
++|++++||||+. .||.+|+++||.+|+|.
T Consensus 156 ~~~~~~v~vgD~~-~di~aA~~aG~~~i~v~ 185 (185)
T TIGR01990 156 VSPSECIGIEDAQ-AGIEAIKAAGMFAVGVG 185 (185)
T ss_pred CCHHHeEEEecCH-HHHHHHHHcCCEEEecC
Confidence 9999999999997 89999999999999873
No 47
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=99.29 E-value=1.1e-11 Score=115.36 Aligned_cols=95 Identities=17% Similarity=0.230 Sum_probs=79.5
Q ss_pred CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHHh
Q 017982 200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKHF 270 (363)
Q Consensus 200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~l 270 (363)
..++|++.+.|+.|+ +.|++++|+||+. ...+..+++.+|+. ++. ....||+| .+..+++++
T Consensus 94 ~~~~pg~~~~L~~L~-~~g~~l~i~Tn~~--------~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~l 164 (229)
T PRK13226 94 SQLFDGVEGMLQRLE-CAGCVWGIVTNKP--------EYLARLILPQLGWEQRCAVLIGGDTLAERKPHPLPLLVAAERI 164 (229)
T ss_pred CeeCCCHHHHHHHHH-HCCCeEEEECCCC--------HHHHHHHHHHcCchhcccEEEecCcCCCCCCCHHHHHHHHHHh
Confidence 357899999999998 5799999999996 35556677777764 222 23579999 578999999
Q ss_pred CCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCC
Q 017982 271 GCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPL 304 (363)
Q Consensus 271 gl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~ 304 (363)
|++|++++||||+. .||.+|+++|+.+|+|.-+
T Consensus 165 ~~~p~~~l~IGDs~-~Di~aA~~aG~~~i~v~~g 197 (229)
T PRK13226 165 GVAPTDCVYVGDDE-RDILAARAAGMPSVAALWG 197 (229)
T ss_pred CCChhhEEEeCCCH-HHHHHHHHCCCcEEEEeec
Confidence 99999999999998 8999999999999999644
No 48
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=99.28 E-value=2e-11 Score=110.80 Aligned_cols=94 Identities=17% Similarity=0.238 Sum_probs=73.5
Q ss_pred CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHH-hCC----eEEE----cccCCCch-hHHHHHHHh
Q 017982 201 TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGK-IGI----KVIR----HRVKKPAG-TAEEIEKHF 270 (363)
Q Consensus 201 ~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~-LGi----~~I~----~~~kKP~p-~~~~alk~l 270 (363)
.++|++.++|+.|+ +.|++++|+||+.. ..+..+... .++ +.+. .+..||+| .|..+++++
T Consensus 84 ~~~~g~~e~L~~l~-~~g~~~~i~Sn~~~--------~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~ 154 (199)
T PRK09456 84 ALRPEVIAIMHKLR-EQGHRVVVLSNTNR--------LHTTFWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVLQAE 154 (199)
T ss_pred ccCHHHHHHHHHHH-hCCCcEEEEcCCch--------hhHHHHHhhchhHHHhcCEEEEecccCCCCCCHHHHHHHHHHc
Confidence 36899999999998 57999999999962 222222111 122 2221 35679999 679999999
Q ss_pred CCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCC
Q 017982 271 GCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPL 304 (363)
Q Consensus 271 gl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~ 304 (363)
|++|++++||||+. +||.+|+++|+.+|++...
T Consensus 155 ~~~p~~~l~vgD~~-~di~aA~~aG~~~i~~~~~ 187 (199)
T PRK09456 155 GFSAADAVFFDDNA-DNIEAANALGITSILVTDK 187 (199)
T ss_pred CCChhHeEEeCCCH-HHHHHHHHcCCEEEEecCC
Confidence 99999999999998 7999999999999999764
No 49
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=99.27 E-value=2e-11 Score=104.72 Aligned_cols=101 Identities=21% Similarity=0.173 Sum_probs=75.6
Q ss_pred CEEEEcCCceeecCC---CC--------CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhC----
Q 017982 184 KGVVFDKDNTLTAPY---SL--------TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIG---- 248 (363)
Q Consensus 184 kaVV~DlDnTL~~~~---~~--------~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LG---- 248 (363)
|++++|+||||..+. .. .++|++.++|+.|+ +.|++++|+||+.. ...+..+++.++
T Consensus 1 kli~~DlD~Tl~~~~~~~~~~~~~~~~~~~~~gv~e~L~~Lk-~~g~~l~i~Sn~~~-------~~~~~~~l~~~~~~~~ 72 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIVVGEDPIIDLEVTIKEIRDKLQTLK-KNGFLLALASYNDD-------PHVAYELLKIFEDFGI 72 (128)
T ss_pred CEEEEeCCCCCCCCCcccccCCcchhhHHHHHHHHHHHHHHH-HCCeEEEEEeCCCC-------HHHHHHHHHhcccccc
Confidence 578999999998762 12 26899999999998 57999999999931 244555666666
Q ss_pred ---Ce----EEEcccCCCch-hHHHHHHHhC--CCCCcEEEEccCCcccHHHHHH
Q 017982 249 ---IK----VIRHRVKKPAG-TAEEIEKHFG--CQSSQLIMVGDRPFTDIVYGNR 293 (363)
Q Consensus 249 ---i~----~I~~~~kKP~p-~~~~alk~lg--l~pee~vmVGDrL~TDI~~A~r 293 (363)
+. .+..+..+|.+ .+..+++++| +.|++|+||||+. .|+...++
T Consensus 73 i~~l~~~f~~~~~~~~~pkp~~~~~a~~~lg~~~~p~~~l~igDs~-~n~~~~~~ 126 (128)
T TIGR01681 73 IFPLAEYFDPLTIGYWLPKSPRLVEIALKLNGVLKPKSILFVDDRP-DNNEEVDY 126 (128)
T ss_pred chhhHhhhhhhhhcCCCcHHHHHHHHHHHhcCCCCcceEEEECCCH-hHHHHHHh
Confidence 32 12122246777 5789999999 9999999999999 67766543
No 50
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=99.27 E-value=2e-11 Score=110.99 Aligned_cols=96 Identities=19% Similarity=0.177 Sum_probs=79.6
Q ss_pred CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHHh
Q 017982 200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKHF 270 (363)
Q Consensus 200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~l 270 (363)
..++|++.++|++|++ . ++++|+||+. ...+..+++.+|+. .+. .+..||++ .+..+++++
T Consensus 96 ~~~~~g~~~~L~~l~~-~-~~~~i~Sn~~--------~~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~ 165 (224)
T TIGR02254 96 HQLLPGAFELMENLQQ-K-FRLYIVTNGV--------RETQYKRLRKSGLFPFFDDIFVSEDAGIQKPDKEIFNYALERM 165 (224)
T ss_pred CeeCccHHHHHHHHHh-c-CcEEEEeCCc--------hHHHHHHHHHCCcHhhcCEEEEcCccCCCCCCHHHHHHHHHHh
Confidence 3578999999999984 5 8999999996 35666777888874 222 24569999 579999999
Q ss_pred -CCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982 271 -GCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS 305 (363)
Q Consensus 271 -gl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~ 305 (363)
|++|++++||||+...||.+|+++|+.+|++..+.
T Consensus 166 ~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~ 201 (224)
T TIGR02254 166 PKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDM 201 (224)
T ss_pred cCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCC
Confidence 99999999999998569999999999999998543
No 51
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=99.26 E-value=1.4e-11 Score=115.40 Aligned_cols=91 Identities=15% Similarity=0.232 Sum_probs=73.9
Q ss_pred CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHHh
Q 017982 200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKHF 270 (363)
Q Consensus 200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~l 270 (363)
..++|++.++|+.|++ +++++|+||+.. . .+.+|+. .+. ....||++ .+..+++++
T Consensus 112 ~~~~~gv~~~L~~L~~--~~~l~i~Tn~~~---------~----~~~~gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~~ 176 (238)
T PRK10748 112 IDVPQATHDTLKQLAK--KWPLVAITNGNA---------Q----PELFGLGDYFEFVLRAGPHGRSKPFSDMYHLAAEKL 176 (238)
T ss_pred CCCCccHHHHHHHHHc--CCCEEEEECCCc---------h----HHHCCcHHhhceeEecccCCcCCCcHHHHHHHHHHc
Confidence 5678999999999983 589999999852 1 1345553 222 24579999 678999999
Q ss_pred CCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982 271 GCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS 305 (363)
Q Consensus 271 gl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~ 305 (363)
|++|++++||||++.+||.+|+++||.+|||.+..
T Consensus 177 ~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~~~ 211 (238)
T PRK10748 177 NVPIGEILHVGDDLTTDVAGAIRCGMQACWINPEN 211 (238)
T ss_pred CCChhHEEEEcCCcHHHHHHHHHCCCeEEEEcCCC
Confidence 99999999999997689999999999999998654
No 52
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=99.25 E-value=2.1e-11 Score=108.93 Aligned_cols=113 Identities=19% Similarity=0.234 Sum_probs=80.2
Q ss_pred CEEEEcCCceeecC----------CCCCc-chhHHHHHHHHHHhCCCeEEEEeCCCCCCCC--Cc----cHHHHHHHHHH
Q 017982 184 KGVVFDKDNTLTAP----------YSLTL-WGPLSSSIEQCKSVFGHDIAVFSNSAGLYEY--DN----DASKARKLEGK 246 (363)
Q Consensus 184 kaVV~DlDnTL~~~----------~~~~~-~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~--dp----~~~~a~~i~~~ 246 (363)
|++.||+|+||+.. ..+.. ++++.+.|++|. +.|+.|+|+||..|.... .. ...++..+++.
T Consensus 1 Kia~fD~DgTLi~~~s~~~f~~~~~D~~~~~~~v~~~L~~l~-~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~ 79 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKSGKKFPKDPDDWKFFPPGVPEALRELH-KKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKE 79 (159)
T ss_dssp SEEEE-SCTTTEE-STSTTS-SSTCGGEEC-TTHHHHHHHHH-HTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCccCCCCCCcCcCCHHHhhhcchhHHHHHHHHH-hcCCeEEEEeCccccccccccchHHHHHHHHHHHHHH
Confidence 57889999999752 22334 458999999998 689999999999987651 11 13566788889
Q ss_pred hCCeEEE------cccCCCchhH-HHHHHHhC----CCCCcEEEEccC----------CcccHHHHHHcCCe
Q 017982 247 IGIKVIR------HRVKKPAGTA-EEIEKHFG----CQSSQLIMVGDR----------PFTDIVYGNRNGFL 297 (363)
Q Consensus 247 LGi~~I~------~~~kKP~p~~-~~alk~lg----l~pee~vmVGDr----------L~TDI~~A~raGi~ 297 (363)
+++++.. ..++||.++| +.+++.++ ++.++++||||. -.+|..+|.+.|+.
T Consensus 80 l~ip~~~~~a~~~d~~RKP~~GM~~~~~~~~~~~~~id~~~Sf~VGDaagr~~~~~d~s~~D~~fA~N~gi~ 151 (159)
T PF08645_consen 80 LGIPIQVYAAPHKDPCRKPNPGMWEFALKDYNDGVEIDLANSFYVGDAAGRSKKKKDFSDSDRKFALNCGIK 151 (159)
T ss_dssp CTS-EEEEECGCSSTTSTTSSHHHHHHCCCTSTT--S-CCC-EEEESSCHCTB-S--S--HHHHHHHHHT--
T ss_pred cCCceEEEecCCCCCCCCCchhHHHHHHHhccccccccccceEEEeccCCCCCcccccChhHHHHHHHcCCc
Confidence 9999532 2589999976 77887776 499999999995 24799999999997
No 53
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=99.25 E-value=7.3e-11 Score=112.47 Aligned_cols=112 Identities=17% Similarity=0.154 Sum_probs=85.8
Q ss_pred CEEEEcCCc-eeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCC-----ccHHHHHHHHHHhCCeEEEcccC
Q 017982 184 KGVVFDKDN-TLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYD-----NDASKARKLEGKIGIKVIRHRVK 257 (363)
Q Consensus 184 kaVV~DlDn-TL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~d-----p~~~~a~~i~~~LGi~~I~~~~k 257 (363)
.+|+++.|. ++ .++++.++++.|+ ..|++++|+||.+..++.. ..+..+..+....+...+. .+
T Consensus 109 ~~Vv~g~~~~~~-------~y~~l~~a~~~L~-~~~~~~~iatn~~~~~~~~~~~~~g~g~~~~~i~~~~~~~~~~--~g 178 (257)
T TIGR01458 109 NCVVMGLAPEHF-------SYQILNQAFRLLL-DGAKPLLIAIGKGRYYKRKDGLALDVGPFVTALEYATDTKATV--VG 178 (257)
T ss_pred CEEEEecccCcc-------CHHHHHHHHHHHH-cCCCCEEEEeCCCCCCcCCCCCCCCchHHHHHHHHHhCCCcee--ec
Confidence 456666543 33 2688889999987 4678899999998654311 1244555666666766543 47
Q ss_pred CCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982 258 KPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS 305 (363)
Q Consensus 258 KP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~ 305 (363)
||++ .++.++++++++|++++||||++.+||.+|+++|+.+|+|..+.
T Consensus 179 KP~p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~~G~ 227 (257)
T TIGR01458 179 KPSKTFFLEALRATGCEPEEAVMIGDDCRDDVGGAQDCGMRGIQVRTGK 227 (257)
T ss_pred CCCHHHHHHHHHHhCCChhhEEEECCCcHHHHHHHHHcCCeEEEECCCC
Confidence 9999 56899999999999999999998899999999999999998664
No 54
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=99.24 E-value=5.7e-11 Score=114.07 Aligned_cols=112 Identities=22% Similarity=0.135 Sum_probs=88.0
Q ss_pred CCEEEEcCCceeecCC-----------CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeE
Q 017982 183 FKGVVFDKDNTLTAPY-----------SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV 251 (363)
Q Consensus 183 IkaVV~DlDnTL~~~~-----------~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~ 251 (363)
.+++++|+|+|+.... ...++|++.++|++|+ +.|++++|+||++. ...+.+++.+++.-
T Consensus 158 ~~~~~~D~dgtl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~-~~g~~i~i~T~r~~--------~~~~~~l~~l~~~~ 228 (300)
T PHA02530 158 PKAVIFDIDGTLAKMGGRSPYDWTKVKEDKPNPMVVELVKMYK-AAGYEIIVVSGRDG--------VCEEDTVEWLRQTD 228 (300)
T ss_pred CCEEEEECCCcCcCCCCCCccchhhcccCCCChhHHHHHHHHH-hCCCEEEEEeCCCh--------hhHHHHHHHHHHcC
Confidence 5789999999997522 2467999999999998 57999999999973 34455555555441
Q ss_pred -----EE-----------cccCCCch-hHHHHHHHhCC-CCCcEEEEccCCcccHHHHHHcCCeEEEEcCC
Q 017982 252 -----IR-----------HRVKKPAG-TAEEIEKHFGC-QSSQLIMVGDRPFTDIVYGNRNGFLTILTEPL 304 (363)
Q Consensus 252 -----I~-----------~~~kKP~p-~~~~alk~lgl-~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~ 304 (363)
+. ...+||++ ...+++++++. ++++++||||+. +||.+|+++|+.+|+|..+
T Consensus 229 ~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~~~~~~~~~~~~vgD~~-~d~~~a~~~Gi~~i~v~~g 298 (300)
T PHA02530 229 IWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWEKIAPKYDVLLAVDDRD-QVVDMWRRIGLECWQVAPG 298 (300)
T ss_pred CchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHHHhccCceEEEEEcCcH-HHHHHHHHhCCeEEEecCC
Confidence 10 12469998 45889998888 679999999999 7999999999999999654
No 55
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=99.24 E-value=3.3e-11 Score=112.33 Aligned_cols=96 Identities=11% Similarity=0.109 Sum_probs=77.9
Q ss_pred CCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHH
Q 017982 198 YSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEK 268 (363)
Q Consensus 198 ~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk 268 (363)
....++|++.+.|+.|+ +.|++++|+||+. ...+...++.+|+. .+. .+..||+| .+..+++
T Consensus 90 ~~~~~~~g~~e~L~~Lk-~~g~~~~i~Tn~~--------~~~~~~~l~~~~l~~~fd~iv~s~~~~~~KP~p~~~~~~~~ 160 (224)
T PRK14988 90 PRAVLREDTVPFLEALK-ASGKRRILLTNAH--------PHNLAVKLEHTGLDAHLDLLLSTHTFGYPKEDQRLWQAVAE 160 (224)
T ss_pred ccCCcCCCHHHHHHHHH-hCCCeEEEEeCcC--------HHHHHHHHHHCCcHHHCCEEEEeeeCCCCCCCHHHHHHHHH
Confidence 34567899999999998 5799999999985 24556666777763 222 34679999 6799999
Q ss_pred HhCCCCCcEEEEccCCcccHHHHHHcCCeE-EEEcC
Q 017982 269 HFGCQSSQLIMVGDRPFTDIVYGNRNGFLT-ILTEP 303 (363)
Q Consensus 269 ~lgl~pee~vmVGDrL~TDI~~A~raGi~T-IlV~p 303 (363)
++|++|++|+||||+. .||++|+++||.+ +.|..
T Consensus 161 ~~~~~p~~~l~igDs~-~di~aA~~aG~~~~~~v~~ 195 (224)
T PRK14988 161 HTGLKAERTLFIDDSE-PILDAAAQFGIRYCLGVTN 195 (224)
T ss_pred HcCCChHHEEEEcCCH-HHHHHHHHcCCeEEEEEeC
Confidence 9999999999999998 7999999999985 56753
No 56
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=99.24 E-value=2.2e-11 Score=107.81 Aligned_cols=90 Identities=16% Similarity=0.227 Sum_probs=75.4
Q ss_pred CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHHh
Q 017982 200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKHF 270 (363)
Q Consensus 200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~l 270 (363)
..++|++.+.|+.|+ +.|++++|+||+. .++.+++.+|+. .+. ....||.+ .+..+++++
T Consensus 87 ~~~~~g~~~~l~~l~-~~g~~i~i~S~~~----------~~~~~l~~~~l~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~ 155 (185)
T TIGR02009 87 AEVLPGIENFLKRLK-KKGIAVGLGSSSK----------NADRILAKLGLTDYFDAIVDADEVKEGKPHPETFLLAAELL 155 (185)
T ss_pred CCCCcCHHHHHHHHH-HcCCeEEEEeCch----------hHHHHHHHcChHHHCCEeeehhhCCCCCCChHHHHHHHHHc
Confidence 567999999999998 5799999999982 356667777764 232 23579998 578999999
Q ss_pred CCCCCcEEEEccCCcccHHHHHHcCCeEEEE
Q 017982 271 GCQSSQLIMVGDRPFTDIVYGNRNGFLTILT 301 (363)
Q Consensus 271 gl~pee~vmVGDrL~TDI~~A~raGi~TIlV 301 (363)
|+++++++||||+. .||.+|+++|+.+|.|
T Consensus 156 ~~~~~~~v~IgD~~-~di~aA~~~G~~~i~v 185 (185)
T TIGR02009 156 GVSPNECVVFEDAL-AGVQAARAAGMFAVAV 185 (185)
T ss_pred CCCHHHeEEEeCcH-hhHHHHHHCCCeEeeC
Confidence 99999999999997 8999999999999976
No 57
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=99.23 E-value=4.2e-11 Score=113.78 Aligned_cols=96 Identities=14% Similarity=0.032 Sum_probs=77.6
Q ss_pred CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCC-----eEEE----cccCCCch-hHHHHHHH
Q 017982 200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGI-----KVIR----HRVKKPAG-TAEEIEKH 269 (363)
Q Consensus 200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi-----~~I~----~~~kKP~p-~~~~alk~ 269 (363)
..++|++.+.|+.|+ +.|++++|+||+. ...+..+++.+++ +.|. ....||+| .+..++++
T Consensus 100 ~~~~pg~~elL~~L~-~~g~~l~I~T~~~--------~~~~~~~l~~~~l~~~~~d~i~~~~~~~~~KP~p~~~~~a~~~ 170 (267)
T PRK13478 100 ATPIPGVLEVIAALR-ARGIKIGSTTGYT--------REMMDVVVPLAAAQGYRPDHVVTTDDVPAGRPYPWMALKNAIE 170 (267)
T ss_pred CCCCCCHHHHHHHHH-HCCCEEEEEcCCc--------HHHHHHHHHHHhhcCCCceEEEcCCcCCCCCCChHHHHHHHHH
Confidence 457899999999998 5799999999996 2445556565443 2332 23579999 57899999
Q ss_pred hCCC-CCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982 270 FGCQ-SSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS 305 (363)
Q Consensus 270 lgl~-pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~ 305 (363)
+|+. +++++||||+. +||.+|+++|+.+|+|..+.
T Consensus 171 l~~~~~~e~l~IGDs~-~Di~aA~~aG~~~i~v~~g~ 206 (267)
T PRK13478 171 LGVYDVAACVKVDDTV-PGIEEGLNAGMWTVGVILSG 206 (267)
T ss_pred cCCCCCcceEEEcCcH-HHHHHHHHCCCEEEEEccCc
Confidence 9996 69999999999 89999999999999998654
No 58
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=99.23 E-value=5.1e-11 Score=108.50 Aligned_cols=98 Identities=14% Similarity=0.154 Sum_probs=73.9
Q ss_pred CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCC----eEEE----cccCCCch-hHHHHHHH
Q 017982 199 SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGI----KVIR----HRVKKPAG-TAEEIEKH 269 (363)
Q Consensus 199 ~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi----~~I~----~~~kKP~p-~~~~alk~ 269 (363)
...++|++.++|+.|+ +.|++++|+||+.... .........+++ +.+. .+..||++ .+..++++
T Consensus 92 ~~~~~~~~~~~L~~L~-~~g~~l~i~Sn~~~~~------~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~ 164 (211)
T TIGR02247 92 NTKLRPSMMAAIKTLR-AKGFKTACITNNFPTD------HSAEEALLPGDIMALFDAVVESCLEGLRKPDPRIYQLMLER 164 (211)
T ss_pred ccccChhHHHHHHHHH-HCCCeEEEEeCCCCcc------chhhhHhhhhhhHhhCCEEEEeeecCCCCCCHHHHHHHHHH
Confidence 3457899999999998 5799999999986311 001111112232 2222 24579999 57999999
Q ss_pred hCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCC
Q 017982 270 FGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPL 304 (363)
Q Consensus 270 lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~ 304 (363)
+|++|++++||||+. .||.+|+++|+.+|+|.+.
T Consensus 165 ~g~~~~~~l~i~D~~-~di~aA~~aG~~~i~v~~~ 198 (211)
T TIGR02247 165 LGVAPEECVFLDDLG-SNLKPAAALGITTIKVSDE 198 (211)
T ss_pred cCCCHHHeEEEcCCH-HHHHHHHHcCCEEEEECCH
Confidence 999999999999997 8999999999999999753
No 59
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=99.22 E-value=6.6e-11 Score=106.99 Aligned_cols=106 Identities=17% Similarity=0.253 Sum_probs=83.9
Q ss_pred CCCEEEEcCCceeecC---CCC--------CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe
Q 017982 182 GFKGVVFDKDNTLTAP---YSL--------TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK 250 (363)
Q Consensus 182 GIkaVV~DlDnTL~~~---~~~--------~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~ 250 (363)
.+|++|||+|+||+.. +.. ...+ -..++.|+ +.|++++|+||+. ...++.+++.+|+.
T Consensus 6 ~i~~~v~d~dGv~tdg~~~~~~~g~~~~~~~~~D--~~~~~~L~-~~Gi~laIiT~k~--------~~~~~~~l~~lgi~ 74 (169)
T TIGR02726 6 NIKLVILDVDGVMTDGRIVINDEGIESRNFDIKD--GMGVIVLQ-LCGIDVAIITSKK--------SGAVRHRAEELKIK 74 (169)
T ss_pred cCeEEEEeCceeeECCeEEEcCCCcEEEEEecch--HHHHHHHH-HCCCEEEEEECCC--------cHHHHHHHHHCCCc
Confidence 5899999999999862 111 1122 23577887 5799999999997 36788899999998
Q ss_pred EEEcccCCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEE
Q 017982 251 VIRHRVKKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTIL 300 (363)
Q Consensus 251 ~I~~~~kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIl 300 (363)
.++.. .||.+ .+..+++++++++++++||||+. +|+.+++.+|+..+-
T Consensus 75 ~~f~~-~kpkp~~~~~~~~~l~~~~~ev~~iGD~~-nDi~~~~~ag~~~am 123 (169)
T TIGR02726 75 RFHEG-IKKKTEPYAQMLEEMNISDAEVCYVGDDL-VDLSMMKRVGLAVAV 123 (169)
T ss_pred EEEec-CCCCHHHHHHHHHHcCcCHHHEEEECCCH-HHHHHHHHCCCeEEC
Confidence 65433 47777 57899999999999999999998 899999999986443
No 60
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=99.20 E-value=2.9e-11 Score=94.34 Aligned_cols=54 Identities=33% Similarity=0.362 Sum_probs=49.4
Q ss_pred cCCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCCCCCc
Q 017982 256 VKKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSLAEE 309 (363)
Q Consensus 256 ~kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~~~~e 309 (363)
++||++ .+..+++++++++++++||||++.|||.+|+++|+.+|+|..+....+
T Consensus 2 ~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~ 56 (75)
T PF13242_consen 2 CGKPSPGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPE 56 (75)
T ss_dssp CSTTSHHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCC
T ss_pred CCCCcHHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHH
Confidence 689999 468999999999999999999977999999999999999998876654
No 61
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=99.20 E-value=8.4e-11 Score=113.80 Aligned_cols=96 Identities=20% Similarity=0.207 Sum_probs=77.1
Q ss_pred CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCC-------eEEE---cccCCCch-hHHHHHH
Q 017982 200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGI-------KVIR---HRVKKPAG-TAEEIEK 268 (363)
Q Consensus 200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi-------~~I~---~~~kKP~p-~~~~alk 268 (363)
..++|++.+.|+.|+ ..|++++|+||+. ...+..+++.++. .++. ....||.| .+..+++
T Consensus 143 ~~l~pGv~elL~~L~-~~g~~l~IvTn~~--------~~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~KP~p~~~~~a~~ 213 (286)
T PLN02779 143 LPLRPGVLRLMDEAL-AAGIKVAVCSTSN--------EKAVSKIVNTLLGPERAQGLDVFAGDDVPKKKPDPDIYNLAAE 213 (286)
T ss_pred CCchhhHHHHHHHHH-HCCCeEEEEeCCC--------HHHHHHHHHHhccccccCceEEEeccccCCCCCCHHHHHHHHH
Confidence 367999999999998 5799999999986 2444555554421 1221 24579999 6789999
Q ss_pred HhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982 269 HFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS 305 (363)
Q Consensus 269 ~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~ 305 (363)
++|++|++++||||+. .||.+|+++||.+|+|..+.
T Consensus 214 ~~~~~p~~~l~IGDs~-~Di~aA~~aG~~~i~v~~g~ 249 (286)
T PLN02779 214 TLGVDPSRCVVVEDSV-IGLQAAKAAGMRCIVTKSSY 249 (286)
T ss_pred HhCcChHHEEEEeCCH-HhHHHHHHcCCEEEEEccCC
Confidence 9999999999999998 79999999999999997554
No 62
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=99.19 E-value=8.9e-11 Score=115.11 Aligned_cols=105 Identities=21% Similarity=0.196 Sum_probs=84.3
Q ss_pred CCCEEEEcCCceeecCC--C--------CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHH----h
Q 017982 182 GFKGVVFDKDNTLTAPY--S--------LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGK----I 247 (363)
Q Consensus 182 GIkaVV~DlDnTL~~~~--~--------~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~----L 247 (363)
-+|++|+|+||||..+- . ...++++.++|+.|+ +.|+.++|+||++ ...+..+++. +
T Consensus 2 ~~k~~v~DlDnTlw~gv~~e~g~~~i~~~~~~~~~~e~L~~L~-~~Gi~lai~S~n~--------~~~a~~~l~~~~~~~ 72 (320)
T TIGR01686 2 ALKVLVLDLDNTLWGGVLGEDGIDNLNLSPLHKTLQEKIKTLK-KQGFLLALASKND--------EDDAKKVFERRKDFI 72 (320)
T ss_pred CeEEEEEcCCCCCCCCEEccCCccccccCccHHHHHHHHHHHH-hCCCEEEEEcCCC--------HHHHHHHHHhCcccc
Confidence 47899999999995421 1 135799999999998 5899999999996 3677777877 7
Q ss_pred CCe--EEE-cccCCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCC
Q 017982 248 GIK--VIR-HRVKKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGF 296 (363)
Q Consensus 248 Gi~--~I~-~~~kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi 296 (363)
++. +.. ....||.+ .+..+++++|+.+++++||||+. .|+.++++++-
T Consensus 73 ~~~~~f~~~~~~~~pk~~~i~~~~~~l~i~~~~~vfidD~~-~d~~~~~~~lp 124 (320)
T TIGR01686 73 LQAEDFDARSINWGPKSESLRKIAKKLNLGTDSFLFIDDNP-AERANVKITLP 124 (320)
T ss_pred CcHHHeeEEEEecCchHHHHHHHHHHhCCCcCcEEEECCCH-HHHHHHHHHCC
Confidence 765 221 23368888 57899999999999999999999 69999998765
No 63
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=99.19 E-value=1.4e-10 Score=106.07 Aligned_cols=88 Identities=19% Similarity=0.168 Sum_probs=70.4
Q ss_pred cchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEc------------------ccCCCch-h
Q 017982 202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRH------------------RVKKPAG-T 262 (363)
Q Consensus 202 ~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~------------------~~kKP~p-~ 262 (363)
++|++.++|+.|+ +.|++++|+||+. ...++.+++.+|+..++. ...+|.+ .
T Consensus 86 ~~~g~~~~l~~l~-~~g~~~~IvS~~~--------~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~ 156 (219)
T TIGR00338 86 LTEGAEELVKTLK-EKGYKVAVISGGF--------DLFAEHVKDKLGLDAAFANRLEVEDGKLTGLVEGPIVDASYKGKT 156 (219)
T ss_pred cCCCHHHHHHHHH-HCCCEEEEECCCc--------HHHHHHHHHHcCCCceEeeEEEEECCEEEEEecCcccCCcccHHH
Confidence 5788888999998 5799999999985 366778888888763321 0123445 4
Q ss_pred HHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEE
Q 017982 263 AEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTI 299 (363)
Q Consensus 263 ~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TI 299 (363)
++.+++++++++++++||||+. +|+.+|+.+|+..+
T Consensus 157 ~~~~~~~~~~~~~~~i~iGDs~-~Di~aa~~ag~~i~ 192 (219)
T TIGR00338 157 LLILLRKEGISPENTVAVGDGA-NDLSMIKAAGLGIA 192 (219)
T ss_pred HHHHHHHcCCCHHHEEEEECCH-HHHHHHHhCCCeEE
Confidence 6889999999999999999997 89999999999753
No 64
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=99.17 E-value=7.5e-11 Score=105.38 Aligned_cols=89 Identities=21% Similarity=0.277 Sum_probs=73.8
Q ss_pred CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----ccc----CCCch-hHHHH
Q 017982 200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRV----KKPAG-TAEEI 266 (363)
Q Consensus 200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~----kKP~p-~~~~a 266 (363)
..+++++.++|++|+ ++++|+||+. ...+..+++.+|+. .+. ... .||+| .+..+
T Consensus 83 ~~~~~g~~~~L~~L~----~~~~i~Tn~~--------~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~ 150 (184)
T TIGR01993 83 LKPDPELRNLLLRLP----GRKIIFTNGD--------RAHARRALNRLGIEDCFDGIFCFDTANPDYLLPKPSPQAYEKA 150 (184)
T ss_pred CCCCHHHHHHHHhCC----CCEEEEeCCC--------HHHHHHHHHHcCcHhhhCeEEEeecccCccCCCCCCHHHHHHH
Confidence 457899999999886 3799999996 35677888888874 222 122 49999 57999
Q ss_pred HHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEE
Q 017982 267 EKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILT 301 (363)
Q Consensus 267 lk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV 301 (363)
++++|++|++++||||+. .||.+|+++|+.+|+|
T Consensus 151 ~~~~~~~~~~~l~vgD~~-~di~aA~~~G~~~i~v 184 (184)
T TIGR01993 151 LREAGVDPERAIFFDDSA-RNIAAAKALGMKTVLV 184 (184)
T ss_pred HHHhCCCccceEEEeCCH-HHHHHHHHcCCEEeeC
Confidence 999999999999999998 7999999999999986
No 65
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=99.16 E-value=1.9e-10 Score=107.94 Aligned_cols=94 Identities=15% Similarity=0.192 Sum_probs=74.3
Q ss_pred CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHh---CCe----EEE--cccCCCch-hHHHHHHH
Q 017982 200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKI---GIK----VIR--HRVKKPAG-TAEEIEKH 269 (363)
Q Consensus 200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~L---Gi~----~I~--~~~kKP~p-~~~~alk~ 269 (363)
..++|++.++|++|+ +.|++++|+||+.. ...+.+.+.+ ++. .++ ....||++ .+..++++
T Consensus 94 ~~lypgv~e~L~~Lk-~~G~~l~I~Sn~s~--------~~~~~~~~~~~~~~L~~~f~~~fd~~~g~KP~p~~y~~i~~~ 164 (220)
T TIGR01691 94 SHLYPDVPPALEAWL-QLGLRLAVYSSGSV--------PAQKLLFGHSDAGNLTPYFSGYFDTTVGLKTEAQSYVKIAGQ 164 (220)
T ss_pred cCcCcCHHHHHHHHH-HCCCEEEEEeCCCH--------HHHHHHHhhccccchhhhcceEEEeCcccCCCHHHHHHHHHH
Confidence 457999999999998 57999999999962 2333444443 221 111 23469999 57999999
Q ss_pred hCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcC
Q 017982 270 FGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEP 303 (363)
Q Consensus 270 lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p 303 (363)
+|++|++++||||+. .|+.+|+++||.+|+|..
T Consensus 165 lgv~p~e~lfVgDs~-~Di~AA~~AG~~ti~v~r 197 (220)
T TIGR01691 165 LGSPPREILFLSDII-NELDAARKAGLHTGQLVR 197 (220)
T ss_pred hCcChhHEEEEeCCH-HHHHHHHHcCCEEEEEEC
Confidence 999999999999998 899999999999999973
No 66
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=99.14 E-value=2.9e-10 Score=103.69 Aligned_cols=97 Identities=21% Similarity=0.241 Sum_probs=80.7
Q ss_pred CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHH
Q 017982 199 SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKH 269 (363)
Q Consensus 199 ~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~ 269 (363)
...++|++.++|+.|+ +.|++++|+||+. ...+..+++.+|+. .+. ....||.+ .+..++++
T Consensus 91 ~~~~~~g~~~~l~~l~-~~g~~~~i~S~~~--------~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~ 161 (226)
T PRK13222 91 GSRLYPGVKETLAALK-AAGYPLAVVTNKP--------TPFVAPLLEALGIADYFSVVIGGDSLPNKKPDPAPLLLACEK 161 (226)
T ss_pred cCccCCCHHHHHHHHH-HCCCeEEEEeCCC--------HHHHHHHHHHcCCccCccEEEcCCCCCCCCcChHHHHHHHHH
Confidence 3567899999999998 5799999999996 35566777888874 222 13579988 57899999
Q ss_pred hCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982 270 FGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS 305 (363)
Q Consensus 270 lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~ 305 (363)
+++++++++||||+. .||.+|+++|+.+|+|..+.
T Consensus 162 ~~~~~~~~i~igD~~-~Di~~a~~~g~~~i~v~~g~ 196 (226)
T PRK13222 162 LGLDPEEMLFVGDSR-NDIQAARAAGCPSVGVTYGY 196 (226)
T ss_pred cCCChhheEEECCCH-HHHHHHHHCCCcEEEECcCC
Confidence 999999999999997 89999999999999998544
No 67
>PLN02811 hydrolase
Probab=99.14 E-value=2.9e-10 Score=104.91 Aligned_cols=98 Identities=13% Similarity=0.169 Sum_probs=73.9
Q ss_pred CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCC----eEE-Ec-----ccCCCch-hHHHHH
Q 017982 199 SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGI----KVI-RH-----RVKKPAG-TAEEIE 267 (363)
Q Consensus 199 ~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi----~~I-~~-----~~kKP~p-~~~~al 267 (363)
...++|++.++|+.|+ +.|++++|+||+.. ......+.+..++ +.+ .. ...||+| .+..++
T Consensus 76 ~~~l~~gv~e~l~~L~-~~g~~~~i~S~~~~-------~~~~~~~~~~~~l~~~f~~i~~~~~~~~~~~KP~p~~~~~a~ 147 (220)
T PLN02811 76 TSDLMPGAERLVRHLH-AKGIPIAIATGSHK-------RHFDLKTQRHGELFSLMHHVVTGDDPEVKQGKPAPDIFLAAA 147 (220)
T ss_pred hCCCCccHHHHHHHHH-HCCCcEEEEeCCch-------hhHHHHHcccHHHHhhCCEEEECChhhccCCCCCcHHHHHHH
Confidence 3457899999999998 57999999999862 1111122222222 122 21 2469999 678999
Q ss_pred HHhC---CCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982 268 KHFG---CQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS 305 (363)
Q Consensus 268 k~lg---l~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~ 305 (363)
++++ ++|++|+||||+. .|+.+|+++|+.+|+|....
T Consensus 148 ~~~~~~~~~~~~~v~IgDs~-~di~aA~~aG~~~i~v~~~~ 187 (220)
T PLN02811 148 RRFEDGPVDPGKVLVFEDAP-SGVEAAKNAGMSVVMVPDPR 187 (220)
T ss_pred HHhCCCCCCccceEEEeccH-hhHHHHHHCCCeEEEEeCCC
Confidence 9996 9999999999999 79999999999999997543
No 68
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=99.14 E-value=2.1e-10 Score=110.07 Aligned_cols=95 Identities=20% Similarity=0.219 Sum_probs=79.2
Q ss_pred CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHHh
Q 017982 200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKHF 270 (363)
Q Consensus 200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~l 270 (363)
..++|++.+.|+.|+ ..|++++|+||+. ...++.+++.+|+. .+. ...+||.+ .++.+++++
T Consensus 100 ~~~~~g~~e~L~~Lk-~~g~~l~ivTn~~--------~~~~~~~l~~~~i~~~f~~i~~~d~~~~~Kp~p~~~~~~~~~~ 170 (272)
T PRK13223 100 TVVYPGVRDTLKWLK-KQGVEMALITNKP--------ERFVAPLLDQMKIGRYFRWIIGGDTLPQKKPDPAALLFVMKMA 170 (272)
T ss_pred CccCCCHHHHHHHHH-HCCCeEEEEECCc--------HHHHHHHHHHcCcHhhCeEEEecCCCCCCCCCcHHHHHHHHHh
Confidence 457899999999998 5799999999986 24566777777764 222 23579998 578999999
Q ss_pred CCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCC
Q 017982 271 GCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPL 304 (363)
Q Consensus 271 gl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~ 304 (363)
|+++++++||||+. .||.+|+++|+.+++|..+
T Consensus 171 g~~~~~~l~IGD~~-~Di~aA~~aGi~~i~v~~G 203 (272)
T PRK13223 171 GVPPSQSLFVGDSR-SDVLAAKAAGVQCVALSYG 203 (272)
T ss_pred CCChhHEEEECCCH-HHHHHHHHCCCeEEEEecC
Confidence 99999999999997 8999999999999999754
No 69
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=99.13 E-value=1.8e-10 Score=105.55 Aligned_cols=91 Identities=19% Similarity=0.168 Sum_probs=75.1
Q ss_pred CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe-----EE-E---cccCCCch-hHHHHHH
Q 017982 199 SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK-----VI-R---HRVKKPAG-TAEEIEK 268 (363)
Q Consensus 199 ~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~-----~I-~---~~~kKP~p-~~~~alk 268 (363)
...++|++.++|+.| +++++|+||+. ...+...++.+|+. .+ . .+..||++ .+..+++
T Consensus 86 ~~~~~~gv~~~L~~L----~~~~~ivTn~~--------~~~~~~~l~~~~l~~~F~~~v~~~~~~~~~KP~p~~~~~a~~ 153 (221)
T PRK10563 86 ELEPIAGANALLESI----TVPMCVVSNGP--------VSKMQHSLGKTGMLHYFPDKLFSGYDIQRWKPDPALMFHAAE 153 (221)
T ss_pred cCCcCCCHHHHHHHc----CCCEEEEeCCc--------HHHHHHHHHhcChHHhCcceEeeHHhcCCCCCChHHHHHHHH
Confidence 356789999999887 36999999986 35566777777763 22 2 24579999 6799999
Q ss_pred HhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEc
Q 017982 269 HFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTE 302 (363)
Q Consensus 269 ~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~ 302 (363)
++|++|++|+||||+. .||.+|+++|+.+|++.
T Consensus 154 ~~~~~p~~~l~igDs~-~di~aA~~aG~~~i~~~ 186 (221)
T PRK10563 154 AMNVNVENCILVDDSS-AGAQSGIAAGMEVFYFC 186 (221)
T ss_pred HcCCCHHHeEEEeCcH-hhHHHHHHCCCEEEEEC
Confidence 9999999999999999 79999999999999996
No 70
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=99.13 E-value=2.3e-10 Score=119.79 Aligned_cols=113 Identities=19% Similarity=0.275 Sum_probs=86.8
Q ss_pred CCCEEEEcCCceeecCC----------CCC-cchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCC--c--cHHHHHHHHHH
Q 017982 182 GFKGVVFDKDNTLTAPY----------SLT-LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYD--N--DASKARKLEGK 246 (363)
Q Consensus 182 GIkaVV~DlDnTL~~~~----------~~~-~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~d--p--~~~~a~~i~~~ 246 (363)
-.|+++||+|+||+... .+. ++|++.+.|+.|+ +.|++++|+||+.+...+. . ....+..+++.
T Consensus 167 ~~Kia~fD~DGTLi~t~sg~~~~~~~~d~~~l~pgV~e~L~~L~-~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~ 245 (526)
T TIGR01663 167 QEKIAGFDLDGTIIKTKSGKVFPKGPDDWQIIFPEIPEKLKELE-ADGFKICIFTNQGGIARGKINADDFKAKIEAIVAK 245 (526)
T ss_pred cCcEEEEECCCCccccCCCccCCCCHHHeeecccCHHHHHHHHH-HCCCEEEEEECCcccccCcccHHHHHHHHHHHHHH
Confidence 45899999999998522 122 5899999999998 6899999999998643211 0 11357788889
Q ss_pred hCCeEEE------cccCCCchhH-HHHHHHhC----CCCCcEEEEccCCcccHHHHHHcCC
Q 017982 247 IGIKVIR------HRVKKPAGTA-EEIEKHFG----CQSSQLIMVGDRPFTDIVYGNRNGF 296 (363)
Q Consensus 247 LGi~~I~------~~~kKP~p~~-~~alk~lg----l~pee~vmVGDrL~TDI~~A~raGi 296 (363)
+|+++.. ..++||.+.| ..++++++ +++++++||||.. .|+.+|+++|-
T Consensus 246 lgipfdviia~~~~~~RKP~pGm~~~a~~~~~~~~~Id~~~S~~VGDaa-gr~~~g~~ag~ 305 (526)
T TIGR01663 246 LGVPFQVFIAIGAGFYRKPLTGMWDHLKEEANDGTEIQEDDCFFVGDAA-GRPANGKAAGK 305 (526)
T ss_pred cCCceEEEEeCCCCCCCCCCHHHHHHHHHhcCcccCCCHHHeEEeCCcc-cchHHHHhcCC
Confidence 9988421 2467999964 78888884 8999999999998 78888887775
No 71
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=99.11 E-value=2.8e-10 Score=101.34 Aligned_cols=90 Identities=18% Similarity=0.192 Sum_probs=74.1
Q ss_pred CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEE----cccCCCch-hHHHHHHHhC
Q 017982 201 TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIR----HRVKKPAG-TAEEIEKHFG 271 (363)
Q Consensus 201 ~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~----~~~kKP~p-~~~~alk~lg 271 (363)
.++|+ .+.|..|++ +++++|+||+. ...+..+++.+|+. .|. ....||+| .+..+++++|
T Consensus 88 ~~~~~-~e~L~~L~~--~~~l~I~T~~~--------~~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~ 156 (188)
T PRK10725 88 EPLPL-IEVVKAWHG--RRPMAVGTGSE--------SAIAEALLAHLGLRRYFDAVVAADDVQHHKPAPDTFLRCAQLMG 156 (188)
T ss_pred CCccH-HHHHHHHHh--CCCEEEEcCCc--------hHHHHHHHHhCCcHhHceEEEehhhccCCCCChHHHHHHHHHcC
Confidence 45664 588989873 47999999996 36677788888874 232 24579999 6799999999
Q ss_pred CCCCcEEEEccCCcccHHHHHHcCCeEEEEc
Q 017982 272 CQSSQLIMVGDRPFTDIVYGNRNGFLTILTE 302 (363)
Q Consensus 272 l~pee~vmVGDrL~TDI~~A~raGi~TIlV~ 302 (363)
++|++++||||+. .||.+|+++|+.+|+|.
T Consensus 157 ~~~~~~l~igDs~-~di~aA~~aG~~~i~~~ 186 (188)
T PRK10725 157 VQPTQCVVFEDAD-FGIQAARAAGMDAVDVR 186 (188)
T ss_pred CCHHHeEEEeccH-hhHHHHHHCCCEEEeec
Confidence 9999999999997 89999999999999985
No 72
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=99.09 E-value=1.5e-09 Score=102.06 Aligned_cols=110 Identities=20% Similarity=0.201 Sum_probs=79.1
Q ss_pred CCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCC-C-----ccHHHHHHHHHHhCCeEEEccc
Q 017982 183 FKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEY-D-----NDASKARKLEGKIGIKVIRHRV 256 (363)
Q Consensus 183 IkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~-d-----p~~~~a~~i~~~LGi~~I~~~~ 256 (363)
..+|+++.|.++.+ .....+...++ .|-..+|+||.+...+. + ..+..+..+....|...+. .
T Consensus 118 ~~~vv~~~~~~~~~-------~~~~~a~~~l~--~~~~~~i~tN~d~~~~~~~g~~~~~~g~~~~~i~~~~g~~~~~--~ 186 (236)
T TIGR01460 118 PAAVIVGEPSDFSY-------DELAKAAYLLA--EGDVPFIAANRDDLVRLGDGRFRPGAGAIAAGIKELSGREPTV--V 186 (236)
T ss_pred CeEEEECCCCCcCH-------HHHHHHHHHHh--CCCCeEEEECCCCCCCCCCCcEeecchHHHHHHHHHhCceeee--e
Confidence 45788888877653 33333444443 24357999997743321 1 1245566676666766542 4
Q ss_pred CCCch-hHHHHHHHhCCCCCcE-EEEccCCcccHHHHHHcCCeEEEEcC
Q 017982 257 KKPAG-TAEEIEKHFGCQSSQL-IMVGDRPFTDIVYGNRNGFLTILTEP 303 (363)
Q Consensus 257 kKP~p-~~~~alk~lgl~pee~-vmVGDrL~TDI~~A~raGi~TIlV~p 303 (363)
+||.+ .++.++++++++++++ +||||++.+||.+|+++|+.+|+|..
T Consensus 187 ~KP~~~~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~~G~~~i~v~~ 235 (236)
T TIGR01460 187 GKPSPAIYRAALNLLQARPERRDVMVGDNLRTDILGAKNAGFDTLLVLT 235 (236)
T ss_pred cCCCHHHHHHHHHHhCCCCccceEEECCCcHHHHHHHHHCCCcEEEEec
Confidence 79999 5689999999999998 99999998999999999999999964
No 73
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=99.09 E-value=2.1e-10 Score=100.60 Aligned_cols=101 Identities=17% Similarity=0.127 Sum_probs=79.8
Q ss_pred CEEEEcCCceeecCC--------CC-----------------CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHH
Q 017982 184 KGVVFDKDNTLTAPY--------SL-----------------TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDAS 238 (363)
Q Consensus 184 kaVV~DlDnTL~~~~--------~~-----------------~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~ 238 (363)
..+|+|+|+||..-. .. .++|++.++|+.|+ + +++++|+||+. ..
T Consensus 3 ~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~-~-~~~l~I~Ts~~--------~~ 72 (148)
T smart00577 3 KTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRAS-E-LFELVVFTAGL--------RM 72 (148)
T ss_pred cEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHH-h-ccEEEEEeCCc--------HH
Confidence 468999999997521 01 24899999999997 3 78999999996 46
Q ss_pred HHHHHHHHhCCe--E---EE----cccCCCchhHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCe
Q 017982 239 KARKLEGKIGIK--V---IR----HRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFL 297 (363)
Q Consensus 239 ~a~~i~~~LGi~--~---I~----~~~kKP~p~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~ 297 (363)
.++.+++.+++. + |. ....||. +.++++++|++|++|+||||+. .|+.+|.++|+.
T Consensus 73 ~~~~il~~l~~~~~~f~~i~~~~d~~~~KP~--~~k~l~~l~~~p~~~i~i~Ds~-~~~~aa~~ngI~ 137 (148)
T smart00577 73 YADPVLDLLDPKKYFGYRRLFRDECVFVKGK--YVKDLSLLGRDLSNVIIIDDSP-DSWPFHPENLIP 137 (148)
T ss_pred HHHHHHHHhCcCCCEeeeEEECccccccCCe--EeecHHHcCCChhcEEEEECCH-HHhhcCccCEEE
Confidence 777888888773 2 21 1345776 7788999999999999999999 799999988863
No 74
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=99.08 E-value=7.4e-10 Score=106.87 Aligned_cols=98 Identities=12% Similarity=0.197 Sum_probs=78.6
Q ss_pred CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeE----EE-cccCCCch-hHHHHHHHhCC
Q 017982 199 SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV----IR-HRVKKPAG-TAEEIEKHFGC 272 (363)
Q Consensus 199 ~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~----I~-~~~kKP~p-~~~~alk~lgl 272 (363)
...++|++.++|+.|+ ..|++++|+||+. ...+..+++.+|+.. +. ....++.+ .+..+++++++
T Consensus 140 ~~~l~pg~~e~L~~L~-~~gi~laIvSn~~--------~~~~~~~L~~~gl~~~F~~vi~~~~~~~k~~~~~~~l~~~~~ 210 (273)
T PRK13225 140 ALQLFPGVADLLAQLR-SRSLCLGILSSNS--------RQNIEAFLQRQGLRSLFSVVQAGTPILSKRRALSQLVAREGW 210 (273)
T ss_pred cCCcCCCHHHHHHHHH-HCCCeEEEEeCCC--------HHHHHHHHHHcCChhheEEEEecCCCCCCHHHHHHHHHHhCc
Confidence 3457899999999998 5799999999996 367778888888752 21 11112223 56889999999
Q ss_pred CCCcEEEEccCCcccHHHHHHcCCeEEEEcCCCC
Q 017982 273 QSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSL 306 (363)
Q Consensus 273 ~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~~ 306 (363)
+|++++||||+. .||.+|+++|+.+|+|..+..
T Consensus 211 ~p~~~l~IGDs~-~Di~aA~~AG~~~I~v~~g~~ 243 (273)
T PRK13225 211 QPAAVMYVGDET-RDVEAARQVGLIAVAVTWGFN 243 (273)
T ss_pred ChhHEEEECCCH-HHHHHHHHCCCeEEEEecCCC
Confidence 999999999998 799999999999999976543
No 75
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=99.02 E-value=2.1e-09 Score=100.32 Aligned_cols=50 Identities=24% Similarity=0.301 Sum_probs=46.7
Q ss_pred cCCCchh-HHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982 256 VKKPAGT-AEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS 305 (363)
Q Consensus 256 ~kKP~p~-~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~ 305 (363)
++||++. |+.+++.+|++|+++|||||.+..|+-+|.+.||..|+|+.+.
T Consensus 179 vGKP~~~fFe~al~~~gv~p~~aVMIGDD~~dDvgGAq~~GMrgilVkTGK 229 (262)
T KOG3040|consen 179 VGKPSPFFFESALQALGVDPEEAVMIGDDLNDDVGGAQACGMRGILVKTGK 229 (262)
T ss_pred ecCCCHHHHHHHHHhcCCChHHheEEccccccchhhHhhhcceeEEeeccc
Confidence 7899994 6999999999999999999999999999999999999998654
No 76
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=99.01 E-value=2e-09 Score=101.14 Aligned_cols=96 Identities=22% Similarity=0.175 Sum_probs=71.9
Q ss_pred chhHHHHHHHHHHhCCCeEEEEeCCCCCCCCC----c-cHHHHHHHHHHhCCeEEEcccCCCch-hHHHHHHHhCCC-CC
Q 017982 203 WGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYD----N-DASKARKLEGKIGIKVIRHRVKKPAG-TAEEIEKHFGCQ-SS 275 (363)
Q Consensus 203 ~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~d----p-~~~~a~~i~~~LGi~~I~~~~kKP~p-~~~~alk~lgl~-pe 275 (363)
++++.+.++.++ +.|+++ |+||.+..++.. + .+..+..+.. .+...+ ..+||++ .++.++++++.. ++
T Consensus 140 ~~~~~~~l~~l~-~~g~~~-i~tN~d~~~~~~~~~~~~~g~~~~~i~~-~g~~~~--~~gKP~~~~~~~~~~~~~~~~~~ 214 (242)
T TIGR01459 140 LDEFDELFAPIV-ARKIPN-ICANPDRGINQHGIYRYGAGYYAELIKQ-LGGKVI--YSGKPYPAIFHKALKECSNIPKN 214 (242)
T ss_pred HHHHHHHHHHHH-hCCCcE-EEECCCEeccCCCceEecccHHHHHHHH-hCCcEe--cCCCCCHHHHHHHHHHcCCCCcc
Confidence 688899998886 568886 999998655421 1 1233333332 454443 2689999 568999999875 67
Q ss_pred cEEEEccCCcccHHHHHHcCCeEEEEcC
Q 017982 276 QLIMVGDRPFTDIVYGNRNGFLTILTEP 303 (363)
Q Consensus 276 e~vmVGDrL~TDI~~A~raGi~TIlV~p 303 (363)
+++||||++.+||.+|+++|+.+|||..
T Consensus 215 ~~~~vGD~~~~Di~~a~~~G~~~i~v~t 242 (242)
T TIGR01459 215 RMLMVGDSFYTDILGANRLGIDTALVLT 242 (242)
T ss_pred cEEEECCCcHHHHHHHHHCCCeEEEEeC
Confidence 9999999988999999999999999963
No 77
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=99.00 E-value=3.4e-09 Score=100.80 Aligned_cols=87 Identities=16% Similarity=0.075 Sum_probs=65.9
Q ss_pred hHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeE----EEc----ccCCCchhHHHHHHHhCCCCCc
Q 017982 205 PLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV----IRH----RVKKPAGTAEEIEKHFGCQSSQ 276 (363)
Q Consensus 205 ~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~----I~~----~~kKP~p~~~~alk~lgl~pee 276 (363)
.+.++|+.++ +.|++++|+||+... .....++.+++.+|++. +.. ...||++. .+++++++
T Consensus 118 ~a~elL~~l~-~~G~~i~iVTnr~~~----k~~~~a~~ll~~lGi~~~f~~i~~~d~~~~~Kp~~~--~~l~~~~i---- 186 (237)
T TIGR01672 118 VARQLIDMHQ-RRGDAIFFVTGRTPG----KTDTVSKTLAKNFHIPAMNPVIFAGDKPGQYQYTKT--QWIQDKNI---- 186 (237)
T ss_pred HHHHHHHHHH-HCCCEEEEEeCCCCC----cCHHHHHHHHHHhCCchheeEEECCCCCCCCCCCHH--HHHHhCCC----
Confidence 4888999998 579999999998421 01356788888899872 221 12466652 46667776
Q ss_pred EEEEccCCcccHHHHHHcCCeEEEEcC
Q 017982 277 LIMVGDRPFTDIVYGNRNGFLTILTEP 303 (363)
Q Consensus 277 ~vmVGDrL~TDI~~A~raGi~TIlV~p 303 (363)
++||||+. .||.+|+++|+.+|.|.-
T Consensus 187 ~i~vGDs~-~DI~aAk~AGi~~I~V~~ 212 (237)
T TIGR01672 187 RIHYGDSD-NDITAAKEAGARGIRILR 212 (237)
T ss_pred eEEEeCCH-HHHHHHHHCCCCEEEEEe
Confidence 79999999 799999999999999973
No 78
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=98.97 E-value=3.8e-09 Score=103.87 Aligned_cols=119 Identities=23% Similarity=0.203 Sum_probs=78.4
Q ss_pred CCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHh--CCC------eEEEEeCCCCCCCCC-----c-cHHHHHHHHH--
Q 017982 182 GFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSV--FGH------DIAVFSNSAGLYEYD-----N-DASKARKLEG-- 245 (363)
Q Consensus 182 GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~--~Gi------kl~IVSN~~g~~~~d-----p-~~~~a~~i~~-- 245 (363)
.+.+||+..|.... +..+..+...++.. .|. ..+|+||.+..++.+ + .+..+..+..
T Consensus 146 ~~~aVvv~~d~~~~-------~~~l~~~~~~l~~~g~~g~~~~~~~~~~i~~n~D~~~p~~~g~~~~g~Ga~~~~l~~~~ 218 (321)
T TIGR01456 146 RFDAVLVFNDPVDW-------AADIQIISDALNSEGLPGEKSGKPSIPIYFSNQDLLWANEYKLNRFGQGAFRLLLERIY 218 (321)
T ss_pred ceeEEEEecCchHH-------hhhHHHHHHHHhCCCCcCCCCCCCCCCEEEeCCCEeeccCCCCceechHHHHHHHHHHH
Confidence 56777776664321 22333445455421 121 368999999877621 1 3555666655
Q ss_pred --HhCCeEEEcccCCCch-hHHHHHHHh--------CC-----CCCcEEEEccCCcccHHHHHHcCCeEEEEcCCCCC
Q 017982 246 --KIGIKVIRHRVKKPAG-TAEEIEKHF--------GC-----QSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSLA 307 (363)
Q Consensus 246 --~LGi~~I~~~~kKP~p-~~~~alk~l--------gl-----~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~~~ 307 (363)
..|.+.-....+||++ .|+.+++.+ ++ ++++++||||++.|||.+|+++|+.||||..+..+
T Consensus 219 ~~~tg~~~~~~~~GKP~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tDI~ga~~~G~~silV~tG~~~ 296 (321)
T TIGR01456 219 LELNGKPLQYYTLGKPTKLTYDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASDIIGAQNYGWFSCLVKTGVYN 296 (321)
T ss_pred HHhcCCCcceEEcCCCChHHHHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhhhhhHHhCCceEEEecccccC
Confidence 3465421112689999 467777777 43 45799999999999999999999999999987444
No 79
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=98.97 E-value=8.5e-09 Score=98.07 Aligned_cols=92 Identities=16% Similarity=0.090 Sum_probs=68.0
Q ss_pred cchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe------EEEc--ccCCCchhHHHHHHHhCCC
Q 017982 202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK------VIRH--RVKKPAGTAEEIEKHFGCQ 273 (363)
Q Consensus 202 ~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~------~I~~--~~kKP~p~~~~alk~lgl~ 273 (363)
++|++.+.|+.++ +.|+++++|||..... ....++.+++.+|++ .+.. ...||.+ ..+++.+++
T Consensus 115 p~~Ga~elL~~L~-~~G~~I~iVTnR~~~k----~~~t~~~Llk~~gip~~~~f~vil~gd~~~K~~K--~~~l~~~~i- 186 (237)
T PRK11009 115 PKEVARQLIDMHV-KRGDSIYFITGRTATK----TETVSKTLADDFHIPADNMNPVIFAGDKPGQYTK--TQWLKKKNI- 186 (237)
T ss_pred chHHHHHHHHHHH-HCCCeEEEEeCCCCcc----cHHHHHHHHHHcCCCcccceeEEEcCCCCCCCCH--HHHHHhcCC-
Confidence 4677999999998 5799999999975211 134567778789993 2221 1236665 235566665
Q ss_pred CCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982 274 SSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS 305 (363)
Q Consensus 274 pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~ 305 (363)
++||||++ .||.+|+++|+.+|.|.-+.
T Consensus 187 ---~I~IGDs~-~Di~aA~~AGi~~I~v~~G~ 214 (237)
T PRK11009 187 ---RIFYGDSD-NDITAAREAGARGIRILRAA 214 (237)
T ss_pred ---eEEEcCCH-HHHHHHHHcCCcEEEEecCC
Confidence 99999999 79999999999999997443
No 80
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=98.95 E-value=2.2e-09 Score=120.53 Aligned_cols=95 Identities=21% Similarity=0.193 Sum_probs=80.9
Q ss_pred CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe-----EEE----cccCCCch-hHHHHHHHh
Q 017982 201 TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK-----VIR----HRVKKPAG-TAEEIEKHF 270 (363)
Q Consensus 201 ~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~-----~I~----~~~kKP~p-~~~~alk~l 270 (363)
.++|++.++|+.|+ +.|++++|+||+. ...++.+++.+|+. .+. ....||+| .|..+++++
T Consensus 161 ~~~pG~~elL~~Lk-~~G~~l~IvSn~~--------~~~~~~~L~~~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~l 231 (1057)
T PLN02919 161 IGFPGALELITQCK-NKGLKVAVASSAD--------RIKVDANLAAAGLPLSMFDAIVSADAFENLKPAPDIFLAAAKIL 231 (1057)
T ss_pred ccCccHHHHHHHHH-hCCCeEEEEeCCc--------HHHHHHHHHHcCCChhHCCEEEECcccccCCCCHHHHHHHHHHc
Confidence 36899999999998 5799999999996 36677778888874 121 24579999 678999999
Q ss_pred CCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982 271 GCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS 305 (363)
Q Consensus 271 gl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~ 305 (363)
|++|++++||||+. .||++|+++||.+|+|....
T Consensus 232 gv~p~e~v~IgDs~-~Di~AA~~aGm~~I~v~~~~ 265 (1057)
T PLN02919 232 GVPTSECVVIEDAL-AGVQAARAAGMRCIAVTTTL 265 (1057)
T ss_pred CcCcccEEEEcCCH-HHHHHHHHcCCEEEEECCCC
Confidence 99999999999998 79999999999999998654
No 81
>PLN02954 phosphoserine phosphatase
Probab=98.93 E-value=1e-08 Score=94.05 Aligned_cols=91 Identities=16% Similarity=0.251 Sum_probs=68.1
Q ss_pred CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe---EEE-----c--------------ccCC
Q 017982 201 TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK---VIR-----H--------------RVKK 258 (363)
Q Consensus 201 ~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~---~I~-----~--------------~~kK 258 (363)
.++|++.+.|+.|+ +.|++++|+||+. ...++.+++.+|++ ++. . ...+
T Consensus 84 ~l~pg~~e~l~~l~-~~g~~~~IvS~~~--------~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~ 154 (224)
T PLN02954 84 RLSPGIPELVKKLR-ARGTDVYLVSGGF--------RQMIAPVAAILGIPPENIFANQILFGDSGEYAGFDENEPTSRSG 154 (224)
T ss_pred CCCccHHHHHHHHH-HCCCEEEEECCCc--------HHHHHHHHHHhCCChhhEEEeEEEEcCCCcEECccCCCcccCCc
Confidence 35789999999998 5799999999996 36778888899885 221 0 0122
Q ss_pred Cch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcC
Q 017982 259 PAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEP 303 (363)
Q Consensus 259 P~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p 303 (363)
|.+ .+..+++.+|. ++++||||+. .|+.+|+.+|+..+.+..
T Consensus 155 ~K~~~i~~~~~~~~~--~~~i~iGDs~-~Di~aa~~~~~~~~~~~~ 197 (224)
T PLN02954 155 GKAEAVQHIKKKHGY--KTMVMIGDGA-TDLEARKPGGADLFIGYG 197 (224)
T ss_pred cHHHHHHHHHHHcCC--CceEEEeCCH-HHHHhhhcCCCCEEEecC
Confidence 333 35677777775 6999999999 799999998888766543
No 82
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=98.89 E-value=4.6e-09 Score=95.12 Aligned_cols=83 Identities=19% Similarity=0.227 Sum_probs=67.1
Q ss_pred cchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeE----EE---cccCCCch-hHHHHHHHhCCC
Q 017982 202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV----IR---HRVKKPAG-TAEEIEKHFGCQ 273 (363)
Q Consensus 202 ~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~----I~---~~~kKP~p-~~~~alk~lgl~ 273 (363)
..+.+.+.|+.|+ +.|++++|+||+. ...++.+++.+|+.. +. ....||++ .+..+++++|++
T Consensus 107 ~~~~~~~~L~~l~-~~g~~~~i~T~~~--------~~~~~~~l~~~gl~~~f~~~~~~~~~~~KP~p~~~~~~~~~~~~~ 177 (197)
T TIGR01548 107 TLLTPKGLLRELH-RAPKGMAVVTGRP--------RKDAAKFLTTHGLEILFPVQIWMEDCPPKPNPEPLILAAKALGVE 177 (197)
T ss_pred cccCHHHHHHHHH-HcCCcEEEECCCC--------HHHHHHHHHHcCchhhCCEEEeecCCCCCcCHHHHHHHHHHhCcC
Confidence 3445588999998 5799999999996 367788888898862 21 11239998 578999999999
Q ss_pred CCcEEEEccCCcccHHHHHHc
Q 017982 274 SSQLIMVGDRPFTDIVYGNRN 294 (363)
Q Consensus 274 pee~vmVGDrL~TDI~~A~ra 294 (363)
+++++||||+. .||.+|+++
T Consensus 178 ~~~~i~vGD~~-~Di~aA~~a 197 (197)
T TIGR01548 178 ACHAAMVGDTV-DDIITGRKA 197 (197)
T ss_pred cccEEEEeCCH-HHHHHHHhC
Confidence 99999999999 799999874
No 83
>PHA02597 30.2 hypothetical protein; Provisional
Probab=98.89 E-value=1e-08 Score=92.52 Aligned_cols=94 Identities=12% Similarity=0.094 Sum_probs=68.5
Q ss_pred CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe---------EEEcccCCCch-hHHHHHHH
Q 017982 200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK---------VIRHRVKKPAG-TAEEIEKH 269 (363)
Q Consensus 200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~---------~I~~~~kKP~p-~~~~alk~ 269 (363)
..++|++.+.|++|++ .+ .++++||... .....+.+.+++. ++.....||.+ .+..++++
T Consensus 73 ~~~~pG~~e~L~~L~~-~~-~~~i~Tn~~~--------~~~~~~~~~~~l~~~f~~~f~~i~~~~~~~~kp~~~~~a~~~ 142 (197)
T PHA02597 73 LSAYDDALDVINKLKE-DY-DFVAVTALGD--------SIDALLNRQFNLNALFPGAFSEVLMCGHDESKEKLFIKAKEK 142 (197)
T ss_pred ccCCCCHHHHHHHHHh-cC-CEEEEeCCcc--------chhHHHHhhCCHHHhCCCcccEEEEeccCcccHHHHHHHHHH
Confidence 4579999999999984 44 7888899752 1112233333331 12233456666 57889999
Q ss_pred hCCCCCcEEEEccCCcccHHHHHHc--CCeEEEEcCCCC
Q 017982 270 FGCQSSQLIMVGDRPFTDIVYGNRN--GFLTILTEPLSL 306 (363)
Q Consensus 270 lgl~pee~vmVGDrL~TDI~~A~ra--Gi~TIlV~p~~~ 306 (363)
+| +++++||||+. +||.+|+++ ||.+|+|..+..
T Consensus 143 ~~--~~~~v~vgDs~-~di~aA~~a~~Gi~~i~~~~~~~ 178 (197)
T PHA02597 143 YG--DRVVCFVDDLA-HNLDAAHEALSQLPVIHMLRGER 178 (197)
T ss_pred hC--CCcEEEeCCCH-HHHHHHHHHHcCCcEEEecchhh
Confidence 99 89999999999 799999999 999999986653
No 84
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=98.88 E-value=6.5e-09 Score=89.81 Aligned_cols=83 Identities=20% Similarity=0.226 Sum_probs=63.8
Q ss_pred CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHh-CC--eEEE----cccCCCch-hHHHHHHHhCC
Q 017982 201 TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKI-GI--KVIR----HRVKKPAG-TAEEIEKHFGC 272 (363)
Q Consensus 201 ~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~L-Gi--~~I~----~~~kKP~p-~~~~alk~lgl 272 (363)
...+++.+.|+.|+ +.|++++|+||+.. ..+..+++.+ +. ..+. .. .||.+ .+..+++++|+
T Consensus 64 ~~~~g~~e~l~~L~-~~g~~~~i~T~~~~--------~~~~~~~~~~l~~~f~~i~~~~~~~-~Kp~~~~~~~~~~~~~~ 133 (154)
T TIGR01549 64 AYIRGAADLLKRLK-EAGIKLGIISNGSL--------RAQKLLLRKHLGDYFDLILGSDEFG-AKPEPEIFLAALESLGL 133 (154)
T ss_pred eeccCHHHHHHHHH-HCcCeEEEEeCCch--------HHHHHHHHHHHHhcCcEEEecCCCC-CCcCHHHHHHHHHHcCC
Confidence 34689999999998 57999999999962 3344444442 21 1222 23 69998 57899999999
Q ss_pred CCCcEEEEccCCcccHHHHHHcC
Q 017982 273 QSSQLIMVGDRPFTDIVYGNRNG 295 (363)
Q Consensus 273 ~pee~vmVGDrL~TDI~~A~raG 295 (363)
++ +++||||+. .||.+|+++|
T Consensus 134 ~~-~~l~iGDs~-~Di~aa~~aG 154 (154)
T TIGR01549 134 PP-EVLHVGDNL-NDIEGARNAG 154 (154)
T ss_pred CC-CEEEEeCCH-HHHHHHHHcc
Confidence 99 999999996 8999999987
No 85
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=98.86 E-value=1.1e-08 Score=104.87 Aligned_cols=94 Identities=17% Similarity=0.135 Sum_probs=73.7
Q ss_pred CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEEc--c-cCCCch-hHHHHHHHhC
Q 017982 200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIRH--R-VKKPAG-TAEEIEKHFG 271 (363)
Q Consensus 200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~~--~-~kKP~p-~~~~alk~lg 271 (363)
..++|++.+.|+.|+ +.|++++|+||+. ...+..+++.+|+. .+.. . ..||.| .+..+++++
T Consensus 329 ~~l~pG~~e~L~~Lk-~~g~~l~IvS~~~--------~~~~~~~l~~~~l~~~f~~i~~~d~v~~~~kP~~~~~al~~l- 398 (459)
T PRK06698 329 GALYPNVKEIFTYIK-ENNCSIYIASNGL--------TEYLRAIVSYYDLDQWVTETFSIEQINSLNKSDLVKSILNKY- 398 (459)
T ss_pred CCcCCCHHHHHHHHH-HCCCeEEEEeCCc--------hHHHHHHHHHCCcHhhcceeEecCCCCCCCCcHHHHHHHHhc-
Confidence 356899999999998 5799999999996 36777888888875 2211 1 123444 467777775
Q ss_pred CCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982 272 CQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS 305 (363)
Q Consensus 272 l~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~ 305 (363)
++++|+||||+. .||.+|+++||.+|+|..+.
T Consensus 399 -~~~~~v~VGDs~-~Di~aAk~AG~~~I~v~~~~ 430 (459)
T PRK06698 399 -DIKEAAVVGDRL-SDINAAKDNGLIAIGCNFDF 430 (459)
T ss_pred -CcceEEEEeCCH-HHHHHHHHCCCeEEEEeCCC
Confidence 478999999998 89999999999999997554
No 86
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=98.86 E-value=1e-08 Score=91.98 Aligned_cols=87 Identities=22% Similarity=0.247 Sum_probs=73.9
Q ss_pred CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe-EEEcccC--CCch-hHHHHHHHhCCCC
Q 017982 199 SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK-VIRHRVK--KPAG-TAEEIEKHFGCQS 274 (363)
Q Consensus 199 ~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~-~I~~~~k--KP~p-~~~~alk~lgl~p 274 (363)
...+.|++.++|+.|+ +.|++++|+|+.. ...+..+.+.+|+. .+..+.. ||.+ .+..+++.+++++
T Consensus 125 ~d~~~~~~~~~l~~L~-~~Gi~~~i~TGD~--------~~~a~~~~~~lgi~~~~v~a~~~~kP~~k~~~~~i~~l~~~~ 195 (215)
T PF00702_consen 125 RDPLRPGAKEALQELK-EAGIKVAILTGDN--------ESTASAIAKQLGIFDSIVFARVIGKPEPKIFLRIIKELQVKP 195 (215)
T ss_dssp EEEBHTTHHHHHHHHH-HTTEEEEEEESSE--------HHHHHHHHHHTTSCSEEEEESHETTTHHHHHHHHHHHHTCTG
T ss_pred cCcchhhhhhhhhhhh-ccCcceeeeeccc--------cccccccccccccccccccccccccccchhHHHHHHHHhcCC
Confidence 3457899999999998 5799999999764 47788999999995 3223345 9998 5689999999999
Q ss_pred CcEEEEccCCcccHHHHHHcC
Q 017982 275 SQLIMVGDRPFTDIVYGNRNG 295 (363)
Q Consensus 275 ee~vmVGDrL~TDI~~A~raG 295 (363)
++++||||.+ +|+.++++||
T Consensus 196 ~~v~~vGDg~-nD~~al~~Ag 215 (215)
T PF00702_consen 196 GEVAMVGDGV-NDAPALKAAG 215 (215)
T ss_dssp GGEEEEESSG-GHHHHHHHSS
T ss_pred CEEEEEccCH-HHHHHHHhCc
Confidence 9999999999 9999999987
No 87
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=98.85 E-value=1.5e-08 Score=100.26 Aligned_cols=89 Identities=16% Similarity=0.177 Sum_probs=71.2
Q ss_pred cchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEc------------------ccCCCch-h
Q 017982 202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRH------------------RVKKPAG-T 262 (363)
Q Consensus 202 ~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~------------------~~kKP~p-~ 262 (363)
++|++.+.|+.|+ +.|++++|+|++.. ..++.+.+.+|++.++. ...||.+ .
T Consensus 182 l~pGa~elL~~Lk-~~G~~~aIvSgg~~--------~~~~~l~~~Lgld~~~an~lei~dg~ltg~v~g~iv~~k~K~~~ 252 (322)
T PRK11133 182 LMPGLTELVLKLQ-ALGWKVAIASGGFT--------YFADYLRDKLRLDAAVANELEIMDGKLTGNVLGDIVDAQYKADT 252 (322)
T ss_pred CChhHHHHHHHHH-HcCCEEEEEECCcc--------hhHHHHHHHcCCCeEEEeEEEEECCEEEeEecCccCCcccHHHH
Confidence 5788888899998 68999999999962 34567777888764210 1235655 5
Q ss_pred HHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEE
Q 017982 263 AEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTIL 300 (363)
Q Consensus 263 ~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIl 300 (363)
+.++++++|++++++++|||.. +|+.++..+|+..++
T Consensus 253 L~~la~~lgi~~~qtIaVGDg~-NDl~m~~~AGlgiA~ 289 (322)
T PRK11133 253 LTRLAQEYEIPLAQTVAIGDGA-NDLPMIKAAGLGIAY 289 (322)
T ss_pred HHHHHHHcCCChhhEEEEECCH-HHHHHHHHCCCeEEe
Confidence 6889999999999999999999 899999999997765
No 88
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=98.85 E-value=1.7e-08 Score=100.75 Aligned_cols=96 Identities=17% Similarity=0.247 Sum_probs=74.2
Q ss_pred cchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHh-C-------Ce----EEEcccCCC----------
Q 017982 202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKI-G-------IK----VIRHRVKKP---------- 259 (363)
Q Consensus 202 ~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~L-G-------i~----~I~~~~kKP---------- 259 (363)
..|++.++|++|+ +.|++++|+||++ ...+..+++.+ | +. +|..+.+||
T Consensus 185 ~~pgl~elL~~Lr-~~G~klfLvTNS~--------~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~a~KP~FF~~~~pf~ 255 (343)
T TIGR02244 185 RDPKLPLFLSKLK-EHGKKLFLLTNSD--------YDYTDKGMKYLLGPFLGEHDWRDYFDVVIVDARKPGFFTEGRPFR 255 (343)
T ss_pred cchhHHHHHHHHH-HCCCeEEEEeCCC--------HHHHHHHHHHhhCCcccccchHhhCcEEEeCCCCCcccCCCCceE
Confidence 4789999999998 5799999999997 35666777765 5 22 232233343
Q ss_pred -------------------ch-----hHHHHHHHhCCCCCcEEEEccCCcccHHHHH-HcCCeEEEEcCCCC
Q 017982 260 -------------------AG-----TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGN-RNGFLTILTEPLSL 306 (363)
Q Consensus 260 -------------------~p-----~~~~alk~lgl~pee~vmVGDrL~TDI~~A~-raGi~TIlV~p~~~ 306 (363)
.. ......+.+|+.+++++||||++++||.+|+ .+|+.||+|.|--.
T Consensus 256 ~v~~~~g~~~~~~~~~l~~g~vY~gGn~~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI~pEL~ 327 (343)
T TIGR02244 256 QVDVETGSLKWGEVDGLEPGKVYSGGSLKQFHELLKWRGKEVLYFGDHIYGDLLRSKKKRGWRTAAIIPELE 327 (343)
T ss_pred EEeCCCCcccCCccccccCCCeEeCCCHHHHHHHHCCCCCcEEEECCcchHHHHhhHHhcCcEEEEEchhHH
Confidence 11 1356777889999999999999999999999 99999999998543
No 89
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=98.84 E-value=1.4e-08 Score=91.82 Aligned_cols=90 Identities=16% Similarity=0.160 Sum_probs=66.2
Q ss_pred CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEE------------ccc--CCCchhHHHH
Q 017982 201 TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIR------------HRV--KKPAGTAEEI 266 (363)
Q Consensus 201 ~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~------------~~~--kKP~p~~~~a 266 (363)
.++|++.+.|+.|+ +. ++++|+||+. ...++.+++.+|++.++ .+. .+|.+ ...+
T Consensus 68 ~~~pg~~e~L~~L~-~~-~~~~IvS~~~--------~~~~~~~l~~~gl~~~f~~~~~~~~~~~i~~~~~~~p~~-k~~~ 136 (205)
T PRK13582 68 DPLPGAVEFLDWLR-ER-FQVVILSDTF--------YEFAGPLMRQLGWPTLFCHSLEVDEDGMITGYDLRQPDG-KRQA 136 (205)
T ss_pred CCCCCHHHHHHHHH-hc-CCEEEEeCCc--------HHHHHHHHHHcCCchhhcceEEECCCCeEECccccccch-HHHH
Confidence 35789999999998 45 7999999996 46677888888876211 011 23433 3456
Q ss_pred HHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcC
Q 017982 267 EKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEP 303 (363)
Q Consensus 267 lk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p 303 (363)
++.++..+++++||||+. +|+.+|+.+|+. +++.+
T Consensus 137 l~~~~~~~~~~v~iGDs~-~D~~~~~aa~~~-v~~~~ 171 (205)
T PRK13582 137 VKALKSLGYRVIAAGDSY-NDTTMLGEADAG-ILFRP 171 (205)
T ss_pred HHHHHHhCCeEEEEeCCH-HHHHHHHhCCCC-EEECC
Confidence 667777789999999998 899999999984 44543
No 90
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=98.80 E-value=3e-08 Score=88.65 Aligned_cols=91 Identities=18% Similarity=0.229 Sum_probs=71.7
Q ss_pred CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEE--------cccCCCch----------
Q 017982 200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIR--------HRVKKPAG---------- 261 (363)
Q Consensus 200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~--------~~~kKP~p---------- 261 (363)
..++|++.+.|+.|+ +.|++++|+||+. ...++.+++.+|+..++ .+..+|.+
T Consensus 79 ~~~~~g~~e~l~~l~-~~g~~~~IvS~~~--------~~~~~~~l~~~g~~~~~~~~~~~~~~g~~~p~~~~~~~~~~k~ 149 (201)
T TIGR01491 79 ISLRDYAEELVRWLK-EKGLKTAIVSGGI--------MCLAKKVAEKLNPDYVYSNELVFDEKGFIQPDGIVRVTFDNKG 149 (201)
T ss_pred CCCCccHHHHHHHHH-HCCCEEEEEeCCc--------HHHHHHHHHHhCCCeEEEEEEEEcCCCeEecceeeEEccccHH
Confidence 457899999999998 5799999999996 36778888899986432 11122321
Q ss_pred -hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEE
Q 017982 262 -TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTIL 300 (363)
Q Consensus 262 -~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIl 300 (363)
.+..+++++|+++++++||||+. +|+.+|+.+|+..+.
T Consensus 150 ~~~~~~~~~~~~~~~~~i~iGDs~-~D~~~a~~ag~~~a~ 188 (201)
T TIGR01491 150 EAVERLKRELNPSLTETVAVGDSK-NDLPMFEVADISISL 188 (201)
T ss_pred HHHHHHHHHhCCCHHHEEEEcCCH-hHHHHHHhcCCeEEE
Confidence 35677888999999999999998 899999999995544
No 91
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.69 E-value=3e-08 Score=88.89 Aligned_cols=106 Identities=19% Similarity=0.260 Sum_probs=81.8
Q ss_pred HcCCCEEEEcCCceeecC------CCC-----CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhC
Q 017982 180 RRGFKGVVFDKDNTLTAP------YSL-----TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIG 248 (363)
Q Consensus 180 ~~GIkaVV~DlDnTL~~~------~~~-----~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LG 248 (363)
...||.+++|+|+||+.- +.. .+.++ -.++.|. +.|++++|+|..++ ..++.-++.||
T Consensus 5 a~~IkLli~DVDGvLTDG~ly~~~~Gee~KaFnv~DG--~Gik~l~-~~Gi~vAIITGr~s--------~ive~Ra~~LG 73 (170)
T COG1778 5 AKNIKLLILDVDGVLTDGKLYYDENGEEIKAFNVRDG--HGIKLLL-KSGIKVAIITGRDS--------PIVEKRAKDLG 73 (170)
T ss_pred hhhceEEEEeccceeecCeEEEcCCCceeeeeeccCc--HHHHHHH-HcCCeEEEEeCCCC--------HHHHHHHHHcC
Confidence 467999999999999851 111 11222 1355666 68999999998873 67888889999
Q ss_pred CeEEEcccCCCchhHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCe
Q 017982 249 IKVIRHRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFL 297 (363)
Q Consensus 249 i~~I~~~~kKP~p~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~ 297 (363)
|+.++.+...-...++++++++++.++++++|||.+ .|+-.-.+.|+.
T Consensus 74 I~~~~qG~~dK~~a~~~L~~~~~l~~e~~ayiGDD~-~Dlpvm~~vGls 121 (170)
T COG1778 74 IKHLYQGISDKLAAFEELLKKLNLDPEEVAYVGDDL-VDLPVMEKVGLS 121 (170)
T ss_pred CceeeechHhHHHHHHHHHHHhCCCHHHhhhhcCcc-ccHHHHHHcCCc
Confidence 998874433333367999999999999999999999 799999999974
No 92
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=98.66 E-value=1.8e-08 Score=88.87 Aligned_cols=79 Identities=18% Similarity=0.304 Sum_probs=62.7
Q ss_pred CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeE-----EE---cccCCCch-hHHHHHHH
Q 017982 199 SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV-----IR---HRVKKPAG-TAEEIEKH 269 (363)
Q Consensus 199 ~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~-----I~---~~~kKP~p-~~~~alk~ 269 (363)
...++|++.+.|+ +++|+||+. ...+..+++.+|+.. +. .+..||+| .|..++++
T Consensus 88 ~~~~~~g~~~~L~--------~~~i~Tn~~--------~~~~~~~l~~~~l~~~fd~v~~~~~~~~~KP~p~~f~~~~~~ 151 (175)
T TIGR01493 88 NLPPWPDSAAALA--------RVAILSNAS--------HWAFDQFAQQAGLPWYFDRAFSVDTVRAYKPDPVVYELVFDT 151 (175)
T ss_pred cCCCCCchHHHHH--------HHhhhhCCC--------HHHHHHHHHHCCCHHHHhhhccHhhcCCCCCCHHHHHHHHHH
Confidence 4457899988886 378999996 355666777777751 22 25679999 67999999
Q ss_pred hCCCCCcEEEEccCCcccHHHHHHc
Q 017982 270 FGCQSSQLIMVGDRPFTDIVYGNRN 294 (363)
Q Consensus 270 lgl~pee~vmVGDrL~TDI~~A~ra 294 (363)
+|++|++|+||||+. .||.+|+++
T Consensus 152 ~~~~p~~~l~vgD~~-~Di~~A~~~ 175 (175)
T TIGR01493 152 VGLPPDRVLMVAAHQ-WDLIGARKF 175 (175)
T ss_pred HCCCHHHeEeEecCh-hhHHHHhcC
Confidence 999999999999997 899999864
No 93
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=98.53 E-value=3.9e-07 Score=84.22 Aligned_cols=86 Identities=13% Similarity=0.073 Sum_probs=68.0
Q ss_pred CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe---EE-----E----cccCCCchh-----
Q 017982 200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK---VI-----R----HRVKKPAGT----- 262 (363)
Q Consensus 200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~---~I-----~----~~~kKP~p~----- 262 (363)
..++|++.+.|+.|+ +.|++++|+||+. ...++.+++.+ +. ++ + ....||.+.
T Consensus 73 ~~l~pG~~e~l~~l~-~~g~~~~IvS~~~--------~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~ 142 (219)
T PRK09552 73 AEIREGFHEFVQFVK-ENNIPFYVVSGGM--------DFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPHPCDEHCQ 142 (219)
T ss_pred CCcCcCHHHHHHHHH-HcCCeEEEECCCc--------HHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccCCcccccc
Confidence 457899999999998 5899999999996 35667777776 43 22 1 124577652
Q ss_pred ------HHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCC
Q 017982 263 ------AEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGF 296 (363)
Q Consensus 263 ------~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi 296 (363)
...++++++.++++++||||+. +|+.+|+++|+
T Consensus 143 ~~~~~~K~~~l~~~~~~~~~~i~iGDs~-~Di~aa~~Ag~ 181 (219)
T PRK09552 143 NHCGCCKPSLIRKLSDTNDFHIVIGDSI-TDLEAAKQADK 181 (219)
T ss_pred ccCCCchHHHHHHhccCCCCEEEEeCCH-HHHHHHHHCCc
Confidence 1468899999999999999998 89999999999
No 94
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=98.51 E-value=1.8e-07 Score=83.63 Aligned_cols=123 Identities=15% Similarity=0.107 Sum_probs=87.8
Q ss_pred CEEEEcCCceeecCCCC-----------------------CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHH
Q 017982 184 KGVVFDKDNTLTAPYSL-----------------------TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKA 240 (363)
Q Consensus 184 kaVV~DlDnTL~~~~~~-----------------------~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a 240 (363)
+.+|+|+|.||...... ..-|++.++|+.|.+ . +.++|.|++. ...+
T Consensus 2 ~~lvlDLDeTLi~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l~~-~-yei~I~Ts~~--------~~yA 71 (162)
T TIGR02251 2 KTLVLDLDETLVHSTFKMPKVDADFKVPVLIDGKIIPVYVFKRPHVDEFLERVSK-W-YELVIFTASL--------EEYA 71 (162)
T ss_pred cEEEEcCCCCcCCCCCCCCCCCCceEEEEEecCcEEEEEEEECCCHHHHHHHHHh-c-CEEEEEcCCc--------HHHH
Confidence 47899999999742110 145899999999984 4 8999999996 4678
Q ss_pred HHHHHHhCCe--EE----E-ccc--CCCchhHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCCCCCchh
Q 017982 241 RKLEGKIGIK--VI----R-HRV--KKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSLAEEPF 311 (363)
Q Consensus 241 ~~i~~~LGi~--~I----~-~~~--kKP~p~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~~~~e~~ 311 (363)
+.+++.++.. ++ + ..+ .+|. +.+.+..+|.++++++||||+. .|+.++..+|+..+-..+. .++.-
T Consensus 72 ~~il~~ldp~~~~f~~~l~r~~~~~~~~~--~~K~L~~l~~~~~~vIiVDD~~-~~~~~~~~NgI~i~~f~~~--~~D~~ 146 (162)
T TIGR02251 72 DPVLDILDRGGKVISRRLYRESCVFTNGK--YVKDLSLVGKDLSKVIIIDNSP-YSYSLQPDNAIPIKSWFGD--PNDTE 146 (162)
T ss_pred HHHHHHHCcCCCEEeEEEEccccEEeCCC--EEeEchhcCCChhhEEEEeCCh-hhhccCccCEeecCCCCCC--CCHHH
Confidence 8899988854 21 1 111 2333 4567788999999999999999 6999999999876655532 23434
Q ss_pred HHHHHHHHHH
Q 017982 312 IVRQVRKLEV 321 (363)
Q Consensus 312 ~t~~~R~lE~ 321 (363)
..+++..||.
T Consensus 147 L~~l~~~L~~ 156 (162)
T TIGR02251 147 LLNLIPFLEG 156 (162)
T ss_pred HHHHHHHHHH
Confidence 4556666665
No 95
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=98.49 E-value=5e-07 Score=84.91 Aligned_cols=106 Identities=13% Similarity=0.125 Sum_probs=75.1
Q ss_pred cCCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeE-EEcccCCC
Q 017982 181 RGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV-IRHRVKKP 259 (363)
Q Consensus 181 ~GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~-I~~~~kKP 259 (363)
..++++++|+|+|+. ....++|++.++|++|+ +.|++++|+||+... .......++.+|++. .+...--+
T Consensus 6 ~~~~~~~~D~dG~l~--~~~~~~pga~e~L~~L~-~~G~~~~ivTN~~~~------~~~~~~~L~~~gl~~~~~~~Ii~s 76 (242)
T TIGR01459 6 NDYDVFLLDLWGVII--DGNHTYPGAVQNLNKII-AQGKPVYFVSNSPRN------IFSLHKTLKSLGINADLPEMIISS 76 (242)
T ss_pred hcCCEEEEecccccc--cCCccCccHHHHHHHHH-HCCCEEEEEeCCCCC------hHHHHHHHHHCCCCccccceEEcc
Confidence 468999999999995 56678999999999998 579999999998631 122335678888764 22111111
Q ss_pred c----hhHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCC
Q 017982 260 A----GTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGF 296 (363)
Q Consensus 260 ~----p~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi 296 (363)
. ..+..+++++++++++++||||.. .|+..-...|.
T Consensus 77 ~~~~~~~l~~~~~~~~~~~~~~~~vGd~~-~d~~~~~~~~~ 116 (242)
T TIGR01459 77 GEIAVQMILESKKRFDIRNGIIYLLGHLE-NDIINLMQCYT 116 (242)
T ss_pred HHHHHHHHHhhhhhccCCCceEEEeCCcc-cchhhhcCCCc
Confidence 1 124556677889999999999987 47765544443
No 96
>PLN02645 phosphoglycolate phosphatase
Probab=98.37 E-value=2.3e-06 Score=83.88 Aligned_cols=110 Identities=13% Similarity=0.139 Sum_probs=75.6
Q ss_pred CCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEcccCCCch
Q 017982 182 GFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAG 261 (363)
Q Consensus 182 GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~~~kKP~p 261 (363)
.+++++||+|+||.. ...++|++.++|++|+ +.|++++++||+.... ......-++.+|+++-...+-.+..
T Consensus 27 ~~~~~~~D~DGtl~~--~~~~~~ga~e~l~~lr-~~g~~~~~~TN~~~~~-----~~~~~~~l~~lGi~~~~~~I~ts~~ 98 (311)
T PLN02645 27 SVETFIFDCDGVIWK--GDKLIEGVPETLDMLR-SMGKKLVFVTNNSTKS-----RAQYGKKFESLGLNVTEEEIFSSSF 98 (311)
T ss_pred hCCEEEEeCcCCeEe--CCccCcCHHHHHHHHH-HCCCEEEEEeCCCCCC-----HHHHHHHHHHCCCCCChhhEeehHH
Confidence 699999999999963 4467899999999998 5799999999997421 2222233467887632111222322
Q ss_pred hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEE
Q 017982 262 TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTIL 300 (363)
Q Consensus 262 ~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIl 300 (363)
.....++..+....+.++|++.- .+...+..+|+..+.
T Consensus 99 ~~~~~l~~~~~~~~~~V~viG~~-~~~~~l~~~Gi~~~~ 136 (311)
T PLN02645 99 AAAAYLKSINFPKDKKVYVIGEE-GILEELELAGFQYLG 136 (311)
T ss_pred HHHHHHHhhccCCCCEEEEEcCH-HHHHHHHHCCCEEec
Confidence 33556666666555567777765 588999999997653
No 97
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=98.34 E-value=4e-06 Score=76.20 Aligned_cols=115 Identities=22% Similarity=0.244 Sum_probs=73.7
Q ss_pred CEEEEcCCceeecCC------------------------CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHH
Q 017982 184 KGVVFDKDNTLTAPY------------------------SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASK 239 (363)
Q Consensus 184 kaVV~DlDnTL~~~~------------------------~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~ 239 (363)
+.||||+|.||-.++ ...+||++.+.|+.|+ ..|++++|+|-++. ...
T Consensus 4 klvvFDLD~TlW~~~~~~~~~~Pf~~~~~~~~v~D~~g~~v~lypdv~~iL~~L~-~~gv~lavASRt~~-------P~~ 75 (169)
T PF12689_consen 4 KLVVFDLDYTLWPPWMDTHVGPPFKKISNGNVVVDSRGEEVSLYPDVPEILQELK-ERGVKLAVASRTDE-------PDW 75 (169)
T ss_dssp SEEEE-STTTSSSS-TTTSS-S-EEE-TTS--EEETT--EE---TTHHHHHHHHH-HCT--EEEEE--S--------HHH
T ss_pred cEEEEcCcCCCCchhHhhccCCCceecCCCCEEEeCCCCEEEeCcCHHHHHHHHH-HCCCEEEEEECCCC-------hHH
Confidence 678999999985321 1147999999999999 58999999995541 267
Q ss_pred HHHHHHHhCCe----------EEE--cccCCCch--hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982 240 ARKLEGKIGIK----------VIR--HRVKKPAG--TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS 305 (363)
Q Consensus 240 a~~i~~~LGi~----------~I~--~~~kKP~p--~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~ 305 (363)
++.+++.++++ -++ ....+-.. .|..+.+..|++.++++++-|.. ..+....+.|+.+++|..+.
T Consensus 76 A~~~L~~l~i~~~~~~~~~~~~~F~~~eI~~gsK~~Hf~~i~~~tgI~y~eMlFFDDe~-~N~~~v~~lGV~~v~v~~Gl 154 (169)
T PF12689_consen 76 ARELLKLLEIDDADGDGVPLIEYFDYLEIYPGSKTTHFRRIHRKTGIPYEEMLFFDDES-RNIEVVSKLGVTCVLVPDGL 154 (169)
T ss_dssp HHHHHHHTT-C----------CCECEEEESSS-HHHHHHHHHHHH---GGGEEEEES-H-HHHHHHHTTT-EEEE-SSS-
T ss_pred HHHHHHhcCCCccccccccchhhcchhheecCchHHHHHHHHHhcCCChhHEEEecCch-hcceeeEecCcEEEEeCCCC
Confidence 88999999887 221 11222222 47889999999999999999998 67888888999999998865
Q ss_pred CC
Q 017982 306 LA 307 (363)
Q Consensus 306 ~~ 307 (363)
+.
T Consensus 155 t~ 156 (169)
T PF12689_consen 155 TW 156 (169)
T ss_dssp -H
T ss_pred CH
Confidence 33
No 98
>PRK08238 hypothetical protein; Validated
Probab=98.33 E-value=4.5e-06 Score=86.96 Aligned_cols=91 Identities=13% Similarity=0.164 Sum_probs=71.5
Q ss_pred cchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCC-eEEEc----ccCCCchhHHHHHHHhCCCCCc
Q 017982 202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGI-KVIRH----RVKKPAGTAEEIEKHFGCQSSQ 276 (363)
Q Consensus 202 ~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi-~~I~~----~~kKP~p~~~~alk~lgl~pee 276 (363)
+.|++.+.+++++ +.|++++|+||++ ...++.+.+.+|+ +.+.. ...||.+....+.+.++ .++
T Consensus 73 ~~pga~e~L~~lk-~~G~~v~LaTas~--------~~~a~~i~~~lGlFd~Vigsd~~~~~kg~~K~~~l~~~l~--~~~ 141 (479)
T PRK08238 73 YNEEVLDYLRAER-AAGRKLVLATASD--------ERLAQAVAAHLGLFDGVFASDGTTNLKGAAKAAALVEAFG--ERG 141 (479)
T ss_pred CChhHHHHHHHHH-HCCCEEEEEeCCC--------HHHHHHHHHHcCCCCEEEeCCCccccCCchHHHHHHHHhC--ccC
Confidence 5689999999998 6899999999996 4678889999997 54431 23466554455556665 466
Q ss_pred EEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982 277 LIMVGDRPFTDIVYGNRNGFLTILTEPLS 305 (363)
Q Consensus 277 ~vmVGDrL~TDI~~A~raGi~TIlV~p~~ 305 (363)
++||||+. .|+.+++.+| ..+.|+|..
T Consensus 142 ~~yvGDS~-~Dlp~~~~A~-~av~Vn~~~ 168 (479)
T PRK08238 142 FDYAGNSA-ADLPVWAAAR-RAIVVGASP 168 (479)
T ss_pred eeEecCCH-HHHHHHHhCC-CeEEECCCH
Confidence 89999999 8999999999 889998764
No 99
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=98.30 E-value=3.9e-06 Score=88.41 Aligned_cols=108 Identities=19% Similarity=0.207 Sum_probs=85.1
Q ss_pred HHHHcCCCEEEEcCCceeec--CCCCCcchhHHHHHHHHHHhCC-CeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEE
Q 017982 177 ELQRRGFKGVVFDKDNTLTA--PYSLTLWGPLSSSIEQCKSVFG-HDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIR 253 (363)
Q Consensus 177 ~L~~~GIkaVV~DlDnTL~~--~~~~~~~p~v~e~L~~Lk~~~G-ikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~ 253 (363)
...+.|.+.+.+..|+++.. .....++|++.+.|++|+ +.| ++++|+||.. ...++.+++.+|++.++
T Consensus 358 ~~~~~g~~~~~v~~~~~~~g~i~~~d~~~~g~~e~l~~L~-~~g~i~v~ivTgd~--------~~~a~~i~~~lgi~~~f 428 (556)
T TIGR01525 358 EGESQGKTVVFVAVDGELLGVIALRDQLRPEAKEAIAALK-RAGGIKLVMLTGDN--------RSAAEAVAAELGIDEVH 428 (556)
T ss_pred HHhhCCcEEEEEEECCEEEEEEEecccchHhHHHHHHHHH-HcCCCeEEEEeCCC--------HHHHHHHHHHhCCCeee
Confidence 44567888888888887754 245678999999999998 579 9999999986 47788999999998665
Q ss_pred cccCCCchhHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCC
Q 017982 254 HRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGF 296 (363)
Q Consensus 254 ~~~kKP~p~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi 296 (363)
... .|... .+++++++..+++++||||.. .|+.+++++|+
T Consensus 429 ~~~-~p~~K-~~~v~~l~~~~~~v~~vGDg~-nD~~al~~A~v 468 (556)
T TIGR01525 429 AEL-LPEDK-LAIVKELQEEGGVVAMVGDGI-NDAPALAAADV 468 (556)
T ss_pred ccC-CHHHH-HHHHHHHHHcCCEEEEEECCh-hHHHHHhhCCE
Confidence 332 34332 235566666778999999999 89999999994
No 100
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=98.23 E-value=6.7e-06 Score=74.09 Aligned_cols=92 Identities=18% Similarity=0.145 Sum_probs=70.4
Q ss_pred CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEE-----c--c---cCCCc---------h
Q 017982 201 TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIR-----H--R---VKKPA---------G 261 (363)
Q Consensus 201 ~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~-----~--~---~kKP~---------p 261 (363)
.++|++.+.|+.++ +.|++++|+|++. ...++.+++.+|++.++ . . .+|+. .
T Consensus 87 ~~~~~~~~~l~~l~-~~g~~v~ivS~s~--------~~~v~~~~~~lg~~~~~~~~l~~~~~g~~~g~~~~~~~~g~~K~ 157 (202)
T TIGR01490 87 ILYPEARDLIRWHK-AEGHTIVLVSASL--------TILVKPLARILGIDNAIGTRLEESEDGIYTGNIDGNNCKGEGKV 157 (202)
T ss_pred hccHHHHHHHHHHH-HCCCEEEEEeCCc--------HHHHHHHHHHcCCcceEecceEEcCCCEEeCCccCCCCCChHHH
Confidence 57899999999998 5799999999996 36778888888886321 0 0 12211 1
Q ss_pred -hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcC
Q 017982 262 -TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEP 303 (363)
Q Consensus 262 -~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p 303 (363)
.+.+++++.+++++++++|||+. +|+.++..+|.. ++|+|
T Consensus 158 ~~l~~~~~~~~~~~~~~~~~gDs~-~D~~~~~~a~~~-~~v~~ 198 (202)
T TIGR01490 158 HALAELLAEEQIDLKDSYAYGDSI-SDLPLLSLVGHP-YVVNP 198 (202)
T ss_pred HHHHHHHHHcCCCHHHcEeeeCCc-ccHHHHHhCCCc-EEeCC
Confidence 24667788899999999999999 899999999954 56655
No 101
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=98.21 E-value=8.7e-06 Score=86.08 Aligned_cols=106 Identities=17% Similarity=0.176 Sum_probs=84.3
Q ss_pred HHcCCCEEEEcCCceeecC--CCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEccc
Q 017982 179 QRRGFKGVVFDKDNTLTAP--YSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRV 256 (363)
Q Consensus 179 ~~~GIkaVV~DlDnTL~~~--~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~~~ 256 (363)
.+.|.+.+.++.|+++... -...++|++.+++++|+ +.|++++|+||.. ...++.+++.+|+++. . .
T Consensus 381 ~~~g~~~~~~~~~~~~~g~~~~~d~l~~~a~e~i~~Lk-~~Gi~v~ilSgd~--------~~~a~~ia~~lgi~~~-~-~ 449 (562)
T TIGR01511 381 AEQGSTSVLVAVNGELAGVFALEDQLRPEAKEVIQALK-RRGIEPVMLTGDN--------RKTAKAVAKELGINVR-A-E 449 (562)
T ss_pred hhCCCEEEEEEECCEEEEEEEecccccHHHHHHHHHHH-HcCCeEEEEcCCC--------HHHHHHHHHHcCCcEE-c-c
Confidence 3578888999999998754 35678999999999998 5799999999986 4778899999999843 2 3
Q ss_pred CCCchhHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCe
Q 017982 257 KKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFL 297 (363)
Q Consensus 257 kKP~p~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~ 297 (363)
-+|... ..+++++..++++++||||.. .|+.+++++|+.
T Consensus 450 ~~p~~K-~~~v~~l~~~~~~v~~VGDg~-nD~~al~~A~vg 488 (562)
T TIGR01511 450 VLPDDK-AALIKELQEKGRVVAMVGDGI-NDAPALAQADVG 488 (562)
T ss_pred CChHHH-HHHHHHHHHcCCEEEEEeCCC-ccHHHHhhCCEE
Confidence 355542 234455555788999999999 899999999973
No 102
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=98.19 E-value=1.4e-05 Score=73.25 Aligned_cols=44 Identities=20% Similarity=0.213 Sum_probs=38.0
Q ss_pred CCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCC
Q 017982 183 FKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSA 228 (363)
Q Consensus 183 IkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~ 228 (363)
+|.|++|+|+||.. ....+.++..++|++|+ +.|++++|+|...
T Consensus 1 ik~v~~DlDGTLl~-~~~~i~~~~~~~i~~l~-~~g~~~~~~TGR~ 44 (215)
T TIGR01487 1 IKLVAIDIDGTLTE-PNRMISERAIEAIRKAE-KKGIPVSLVTGNT 44 (215)
T ss_pred CcEEEEecCCCcCC-CCcccCHHHHHHHHHHH-HCCCEEEEEcCCc
Confidence 57899999999985 44468899999999998 5799999999886
No 103
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=98.18 E-value=1e-05 Score=76.49 Aligned_cols=104 Identities=14% Similarity=0.167 Sum_probs=79.5
Q ss_pred CCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEE----cccCCCch-hHHHHHHHhC
Q 017982 197 PYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIR----HRVKKPAG-TAEEIEKHFG 271 (363)
Q Consensus 197 ~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~----~~~kKP~p-~~~~alk~lg 271 (363)
+......||+.+.++.|+ ..|++++++|+..... ++-.-++.+.+...++..+.. ...+||+| +|..+++.+|
T Consensus 88 ~~~~~~~PGa~kLv~~L~-~~gip~alat~s~~~~-~~~k~~~~~~~~~~f~~~v~~d~~~v~~gKP~Pdi~l~A~~~l~ 165 (222)
T KOG2914|consen 88 FMNSILMPGAEKLVNHLK-NNGIPVALATSSTSAS-FELKISRHEDIFKNFSHVVLGDDPEVKNGKPDPDIYLKAAKRLG 165 (222)
T ss_pred ccccccCCcHHHHHHHHH-hCCCCeeEEecCCccc-HHHHHHHhhHHHHhcCCCeecCCccccCCCCCchHHHHHHHhcC
Confidence 355567889999999998 6899999999996311 000012223355555555441 34579999 7899999999
Q ss_pred CCC-CcEEEEccCCcccHHHHHHcCCeEEEEcC
Q 017982 272 CQS-SQLIMVGDRPFTDIVYGNRNGFLTILTEP 303 (363)
Q Consensus 272 l~p-ee~vmVGDrL~TDI~~A~raGi~TIlV~p 303 (363)
..| +.|++++|.. .-|++|+.+||..|+|..
T Consensus 166 ~~~~~k~lVfeds~-~Gv~aa~aagm~vi~v~~ 197 (222)
T KOG2914|consen 166 VPPPSKCLVFEDSP-VGVQAAKAAGMQVVGVAT 197 (222)
T ss_pred CCCccceEEECCCH-HHHHHHHhcCCeEEEecC
Confidence 998 9999999999 799999999999999986
No 104
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=98.14 E-value=2.7e-05 Score=71.55 Aligned_cols=44 Identities=18% Similarity=0.238 Sum_probs=37.0
Q ss_pred CCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCC
Q 017982 183 FKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSA 228 (363)
Q Consensus 183 IkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~ 228 (363)
+|.+++|+|+||.. ....+.+...++|++|+ +.|++++|+|..+
T Consensus 3 ~kli~~DlDGTLl~-~~~~i~~~~~~al~~l~-~~G~~~~iaTGR~ 46 (230)
T PRK01158 3 IKAIAIDIDGTITD-KDRRLSLKAVEAIRKAE-KLGIPVILATGNV 46 (230)
T ss_pred eeEEEEecCCCcCC-CCCccCHHHHHHHHHHH-HCCCEEEEEcCCc
Confidence 68999999999985 34457889999999998 5799999888776
No 105
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=98.13 E-value=1.3e-05 Score=73.98 Aligned_cols=87 Identities=14% Similarity=0.108 Sum_probs=66.4
Q ss_pred CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCC-eEEE----------cccCCCch-hH----
Q 017982 200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGI-KVIR----------HRVKKPAG-TA---- 263 (363)
Q Consensus 200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi-~~I~----------~~~kKP~p-~~---- 263 (363)
..+.|++.+.|+.|+ +.|++++|+|++. ...++.+++.++. ..+. ....||.+ .+
T Consensus 69 ~~l~pg~~e~l~~l~-~~g~~~~IvS~~~--------~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~ 139 (214)
T TIGR03333 69 AEIREGFREFVAFIN-EHGIPFYVISGGM--------DFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWPHPCDGTCQN 139 (214)
T ss_pred CcccccHHHHHHHHH-HCCCeEEEECCCc--------HHHHHHHHHhhCCcccEEeceeEeeCCeeEEeCCCCCcccccc
Confidence 457899999999998 5799999999995 3566667766642 2221 12456765 22
Q ss_pred ------HHHHHHhCCCCCcEEEEccCCcccHHHHHHcCC
Q 017982 264 ------EEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGF 296 (363)
Q Consensus 264 ------~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi 296 (363)
..+++.++..+++++||||.. +|+.+|+.+|+
T Consensus 140 ~cg~~K~~~l~~~~~~~~~~i~iGDg~-~D~~~a~~Ad~ 177 (214)
T TIGR03333 140 QCGCCKPSLIRKLSEPNDYHIVIGDSV-TDVEAAKQSDL 177 (214)
T ss_pred CCCCCHHHHHHHHhhcCCcEEEEeCCH-HHHHHHHhCCe
Confidence 367888888899999999999 89999999998
No 106
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=98.08 E-value=1.4e-05 Score=83.92 Aligned_cols=107 Identities=19% Similarity=0.198 Sum_probs=83.3
Q ss_pred HHHcCCCEEEEcCCceeec--CCCCCcchhHHHHHHHHHHhCCC-eEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEc
Q 017982 178 LQRRGFKGVVFDKDNTLTA--PYSLTLWGPLSSSIEQCKSVFGH-DIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRH 254 (363)
Q Consensus 178 L~~~GIkaVV~DlDnTL~~--~~~~~~~p~v~e~L~~Lk~~~Gi-kl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~ 254 (363)
+...|...+.+..|+++.. .....++|++.+.|++|+ +.|+ +++|+||.. ...++.+++.+|++.++.
T Consensus 337 ~~~~~~~~~~v~~~~~~~g~i~~~d~l~~~~~e~i~~L~-~~Gi~~v~vvTgd~--------~~~a~~i~~~lgi~~~f~ 407 (536)
T TIGR01512 337 PESAGKTIVHVARDGTYLGYILLSDEPRPDAAEAIAELK-ALGIEKVVMLTGDR--------RAVAERVARELGIDEVHA 407 (536)
T ss_pred hhhCCCeEEEEEECCEEEEEEEEeccchHHHHHHHHHHH-HcCCCcEEEEcCCC--------HHHHHHHHHHcCChhhhh
Confidence 3455667777777777654 245578999999999998 6899 999999986 477889999999986543
Q ss_pred ccCCCchhHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCC
Q 017982 255 RVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGF 296 (363)
Q Consensus 255 ~~kKP~p~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi 296 (363)
. -.|... ..++++++...++++||||.. .|+.+++++|+
T Consensus 408 ~-~~p~~K-~~~i~~l~~~~~~v~~vGDg~-nD~~al~~A~v 446 (536)
T TIGR01512 408 E-LLPEDK-LEIVKELREKYGPVAMVGDGI-NDAPALAAADV 446 (536)
T ss_pred c-cCcHHH-HHHHHHHHhcCCEEEEEeCCH-HHHHHHHhCCE
Confidence 2 345432 346677777779999999999 89999999996
No 107
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=98.08 E-value=1.7e-05 Score=76.35 Aligned_cols=106 Identities=11% Similarity=0.145 Sum_probs=68.1
Q ss_pred CCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEcccCCCchh
Q 017982 183 FKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAGT 262 (363)
Q Consensus 183 IkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~~~kKP~p~ 262 (363)
|+++++|+|+||. .....+|++.++|++|+ +.|++++++||++.. .......-++.+|++.-....--+...
T Consensus 2 ~~~~~~D~DGtl~--~~~~~~~ga~e~l~~L~-~~g~~~~~~Tnns~~-----~~~~~~~~l~~~G~~~~~~~i~ts~~~ 73 (279)
T TIGR01452 2 AQGFIFDCDGVLW--LGERVVPGAPELLDRLA-RAGKAALFVTNNSTK-----SRAEYALKFARLGFNGLAEQLFSSALC 73 (279)
T ss_pred ccEEEEeCCCceE--cCCeeCcCHHHHHHHHH-HCCCeEEEEeCCCCC-----CHHHHHHHHHHcCCCCChhhEecHHHH
Confidence 7899999999995 45567899999999998 579999999998631 112222344667875321111111112
Q ss_pred HHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeE
Q 017982 263 AEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLT 298 (363)
Q Consensus 263 ~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~T 298 (363)
+...++.......++.+||+.-.++.. ...|+..
T Consensus 74 ~~~~l~~~~~~~~~v~~iG~~~~~~~l--~~~g~~~ 107 (279)
T TIGR01452 74 AARLLRQPPDAPKAVYVIGEEGLRAEL--DAAGIRL 107 (279)
T ss_pred HHHHHHhhCcCCCEEEEEcCHHHHHHH--HHCCCEE
Confidence 344555544455789999997544443 4567653
No 108
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=98.06 E-value=2.4e-05 Score=75.81 Aligned_cols=99 Identities=15% Similarity=0.118 Sum_probs=66.3
Q ss_pred CCCEEEEcCCceeec-------------------C------CCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCcc
Q 017982 182 GFKGVVFDKDNTLTA-------------------P------YSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDND 236 (363)
Q Consensus 182 GIkaVV~DlDnTL~~-------------------~------~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~ 236 (363)
.-.+||+|+|.|+.. | ....++|++.++|+.|+ ..|++++|+||.... .
T Consensus 74 kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ipGA~e~L~~L~-~~G~~v~iVTnR~~~-----~ 147 (266)
T TIGR01533 74 KKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGALDFLNYAN-SKGVKIFYVSNRSEK-----E 147 (266)
T ss_pred CCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCcCccHHHHHHHHH-HCCCeEEEEeCCCcc-----h
Confidence 346899999999842 1 01136799999999998 579999999999631 1
Q ss_pred HHHHHHHHHHhCCeE-----EEc-ccCCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHH
Q 017982 237 ASKARKLEGKIGIKV-----IRH-RVKKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYG 291 (363)
Q Consensus 237 ~~~a~~i~~~LGi~~-----I~~-~~kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A 291 (363)
...+...++.+|++. +.. ...++.+ ....+.+.+++ ++||||++ .|+..+
T Consensus 148 ~~~T~~~Lkk~Gi~~~~~d~lllr~~~~~K~~rr~~I~~~y~I----vl~vGD~~-~Df~~~ 204 (266)
T TIGR01533 148 KAATLKNLKRFGFPQADEEHLLLKKDKSSKESRRQKVQKDYEI----VLLFGDNL-LDFDDF 204 (266)
T ss_pred HHHHHHHHHHcCcCCCCcceEEeCCCCCCcHHHHHHHHhcCCE----EEEECCCH-HHhhhh
Confidence 234556677788863 221 1122222 34556565565 89999999 699653
No 109
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=98.01 E-value=3e-05 Score=68.41 Aligned_cols=87 Identities=17% Similarity=0.142 Sum_probs=59.6
Q ss_pred CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeE----EEcc-------------cCC----
Q 017982 200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV----IRHR-------------VKK---- 258 (363)
Q Consensus 200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~----I~~~-------------~kK---- 258 (363)
..++|++.+.|+.|+ +.|++++|+||+. ...++.+++.+|+.. +... ..+
T Consensus 71 ~~l~~g~~~ll~~l~-~~g~~~~i~S~~~--------~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~ 141 (188)
T TIGR01489 71 APIDPGFKEFIAFIK-EHGIDFIVISDGN--------DFFIDPVLEGIGEKDVFIEIYSNPASFDNDGRHIVWPHHCHGC 141 (188)
T ss_pred CCCCccHHHHHHHHH-HcCCcEEEEeCCc--------HHHHHHHHHHcCChhheeEEeccCceECCCCcEEEecCCCCcc
Confidence 457889999999998 5799999999996 356677777777641 2100 000
Q ss_pred -Cch-hH--HHHHHHhCCC-CCcEEEEccCCcccHHHHHHcCC
Q 017982 259 -PAG-TA--EEIEKHFGCQ-SSQLIMVGDRPFTDIVYGNRNGF 296 (363)
Q Consensus 259 -P~p-~~--~~alk~lgl~-pee~vmVGDrL~TDI~~A~raGi 296 (363)
+.+ ++ ..+++++.-. +++++||||.. +|+.+|+++++
T Consensus 142 ~~~~~g~~K~~~~~~~~~~~~~~~i~iGD~~-~D~~aa~~~d~ 183 (188)
T TIGR01489 142 CSCPCGCCKGKVIHKLSEPKYQHIIYIGDGV-TDVCPAKLSDV 183 (188)
T ss_pred CcCCCCCCHHHHHHHHHhhcCceEEEECCCc-chhchHhcCCc
Confidence 111 11 1233443333 89999999999 89999999865
No 110
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=98.00 E-value=1.8e-05 Score=65.66 Aligned_cols=100 Identities=17% Similarity=0.158 Sum_probs=61.0
Q ss_pred EEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEcccCCCchhHHH
Q 017982 186 VVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAGTAEE 265 (363)
Q Consensus 186 VV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~~~kKP~p~~~~ 265 (363)
+++|+|+||. ....+.|++.++|++|+ +.|++++++||++... .......++.+|+++-....--|......
T Consensus 1 ~l~D~dGvl~--~g~~~ipga~e~l~~L~-~~g~~~~~lTNns~~s-----~~~~~~~L~~~Gi~~~~~~i~ts~~~~~~ 72 (101)
T PF13344_consen 1 FLFDLDGVLY--NGNEPIPGAVEALDALR-ERGKPVVFLTNNSSRS-----REEYAKKLKKLGIPVDEDEIITSGMAAAE 72 (101)
T ss_dssp EEEESTTTSE--ETTEE-TTHHHHHHHHH-HTTSEEEEEES-SSS------HHHHHHHHHHTTTT--GGGEEEHHHHHHH
T ss_pred CEEeCccEeE--eCCCcCcCHHHHHHHHH-HcCCCEEEEeCCCCCC-----HHHHHHHHHhcCcCCCcCEEEChHHHHHH
Confidence 5899999995 56678999999999998 5799999999997422 23334444788987311001112222233
Q ss_pred HHHHhCCCCCcEEEEccCCcccHHHHHHcCC
Q 017982 266 IEKHFGCQSSQLIMVGDRPFTDIVYGNRNGF 296 (363)
Q Consensus 266 alk~lgl~pee~vmVGDrL~TDI~~A~raGi 296 (363)
.+++. ....++.+||-.- .....+.+|+
T Consensus 73 ~l~~~-~~~~~v~vlG~~~--l~~~l~~~G~ 100 (101)
T PF13344_consen 73 YLKEH-KGGKKVYVLGSDG--LREELREAGF 100 (101)
T ss_dssp HHHHH-TTSSEEEEES-HH--HHHHHHHTTE
T ss_pred HHHhc-CCCCEEEEEcCHH--HHHHHHHcCC
Confidence 33432 3467888888763 4555555654
No 111
>PRK10671 copA copper exporting ATPase; Provisional
Probab=97.96 E-value=6.1e-05 Score=83.10 Aligned_cols=109 Identities=19% Similarity=0.245 Sum_probs=87.3
Q ss_pred HHHHHcCCCEEEEcCCceeec--CCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEE
Q 017982 176 AELQRRGFKGVVFDKDNTLTA--PYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIR 253 (363)
Q Consensus 176 ~~L~~~GIkaVV~DlDnTL~~--~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~ 253 (363)
+.+.+.|.+.+.+-.|+.+.. .....+.|++.+.|++|+ +.|++++++|+.. ...++.+.+.+|++.++
T Consensus 623 ~~~~~~g~~~v~va~~~~~~g~~~l~d~~r~~a~~~i~~L~-~~gi~v~~~Tgd~--------~~~a~~ia~~lgi~~~~ 693 (834)
T PRK10671 623 TAQASQGATPVLLAVDGKAAALLAIRDPLRSDSVAALQRLH-KAGYRLVMLTGDN--------PTTANAIAKEAGIDEVI 693 (834)
T ss_pred HHHHhCCCeEEEEEECCEEEEEEEccCcchhhHHHHHHHHH-HCCCeEEEEcCCC--------HHHHHHHHHHcCCCEEE
Confidence 345678988888888888753 245678899999999998 6799999999985 46778899999998665
Q ss_pred cccCCCchhHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCC
Q 017982 254 HRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGF 296 (363)
Q Consensus 254 ~~~kKP~p~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi 296 (363)
... .|... .++++.++..+++++||||.. .|+.+++++|+
T Consensus 694 ~~~-~p~~K-~~~i~~l~~~~~~v~~vGDg~-nD~~al~~Agv 733 (834)
T PRK10671 694 AGV-LPDGK-AEAIKRLQSQGRQVAMVGDGI-NDAPALAQADV 733 (834)
T ss_pred eCC-CHHHH-HHHHHHHhhcCCEEEEEeCCH-HHHHHHHhCCe
Confidence 332 45432 357777888889999999999 79999999999
No 112
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=97.93 E-value=5.5e-05 Score=70.77 Aligned_cols=94 Identities=16% Similarity=0.240 Sum_probs=72.9
Q ss_pred CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEE------c-----------ccCCCch-
Q 017982 200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIR------H-----------RVKKPAG- 261 (363)
Q Consensus 200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~------~-----------~~kKP~p- 261 (363)
..++|++.+.++.++ ..|++++|+|.+. ...++.+.+.+|++... . -+.....
T Consensus 76 ~~l~~ga~elv~~lk-~~G~~v~iiSgg~--------~~lv~~ia~~lg~d~~~an~l~~~dG~ltG~v~g~~~~~~~K~ 146 (212)
T COG0560 76 LRLTPGAEELVAALK-AAGAKVVIISGGF--------TFLVEPIAERLGIDYVVANELEIDDGKLTGRVVGPICDGEGKA 146 (212)
T ss_pred CcCCccHHHHHHHHH-HCCCEEEEEcCCh--------HHHHHHHHHHhCCchheeeEEEEeCCEEeceeeeeecCcchHH
Confidence 346888999999998 6899999999995 36789999999987321 0 1222222
Q ss_pred -hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCC
Q 017982 262 -TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPL 304 (363)
Q Consensus 262 -~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~ 304 (363)
...+.++.+|+++++++.|||+. .|+.+=..+|.. +.++|.
T Consensus 147 ~~l~~~~~~~g~~~~~~~a~gDs~-nDlpml~~ag~~-ia~n~~ 188 (212)
T COG0560 147 KALRELAAELGIPLEETVAYGDSA-NDLPMLEAAGLP-IAVNPK 188 (212)
T ss_pred HHHHHHHHHcCCCHHHeEEEcCch-hhHHHHHhCCCC-eEeCcC
Confidence 24678888999999999999999 899999999965 556554
No 113
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=97.93 E-value=3.5e-05 Score=72.73 Aligned_cols=94 Identities=22% Similarity=0.194 Sum_probs=76.3
Q ss_pred CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeE-----EE-c--------ccCCCch-hHH
Q 017982 200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV-----IR-H--------RVKKPAG-TAE 264 (363)
Q Consensus 200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~-----I~-~--------~~kKP~p-~~~ 264 (363)
..+-+.+++.|-.|++ . +.+|.||.+ ...|.++++.+|+.- ++ . -+-||.+ .|+
T Consensus 99 LkPD~~LRnlLL~l~~-r--~k~~FTNa~--------k~HA~r~Lk~LGieDcFegii~~e~~np~~~~~vcKP~~~afE 167 (244)
T KOG3109|consen 99 LKPDPVLRNLLLSLKK-R--RKWIFTNAY--------KVHAIRILKKLGIEDCFEGIICFETLNPIEKTVVCKPSEEAFE 167 (244)
T ss_pred cCCCHHHHHHHHhCcc-c--cEEEecCCc--------HHHHHHHHHHhChHHhccceeEeeccCCCCCceeecCCHHHHH
Confidence 4566778888888873 2 389999996 478889999999861 21 0 1458998 689
Q ss_pred HHHHHhCCC-CCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982 265 EIEKHFGCQ-SSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS 305 (363)
Q Consensus 265 ~alk~lgl~-pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~ 305 (363)
.+++..|++ |.+++++.|+. ..|+.|++.|++|++|....
T Consensus 168 ~a~k~agi~~p~~t~FfDDS~-~NI~~ak~vGl~tvlv~~~~ 208 (244)
T KOG3109|consen 168 KAMKVAGIDSPRNTYFFDDSE-RNIQTAKEVGLKTVLVGREH 208 (244)
T ss_pred HHHHHhCCCCcCceEEEcCch-hhHHHHHhccceeEEEEeee
Confidence 999999998 99999999999 78999999999999997544
No 114
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=97.89 E-value=0.00012 Score=66.85 Aligned_cols=35 Identities=20% Similarity=0.405 Sum_probs=31.8
Q ss_pred hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCe
Q 017982 262 TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFL 297 (363)
Q Consensus 262 ~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~ 297 (363)
++..+++++|++++++++|||+. +|+.+.+.+|..
T Consensus 153 ~i~~l~~~~~i~~~~~i~~GD~~-NDi~m~~~ag~~ 187 (225)
T TIGR01482 153 AVKKLKEKLGIKPGETLVCGDSE-NDIDLFEVPGFG 187 (225)
T ss_pred HHHHHHHHhCCCHHHEEEECCCH-hhHHHHHhcCce
Confidence 36788899999999999999998 899999999975
No 115
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=97.84 E-value=0.00011 Score=71.82 Aligned_cols=86 Identities=12% Similarity=0.130 Sum_probs=65.5
Q ss_pred CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EE------E----cccCCCch---
Q 017982 199 SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VI------R----HRVKKPAG--- 261 (363)
Q Consensus 199 ~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I------~----~~~kKP~p--- 261 (363)
...+.|++.++++.|+ +.|++++|+|++. ...++.+++.+|+. .+ + ...++|.|
T Consensus 119 ~l~l~pG~~efl~~L~-~~GIpv~IvS~G~--------~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~~P~i~ 189 (277)
T TIGR01544 119 DVMLKDGYENFFDKLQ-QHSIPVFIFSAGI--------GNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFKGPLIH 189 (277)
T ss_pred CCccCcCHHHHHHHHH-HCCCcEEEEeCCc--------HHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCCCCccc
Confidence 4556899999999998 6899999999996 36788888888872 22 1 12356666
Q ss_pred ------hH-HHHHHHhC--CCCCcEEEEccCCcccHHHHHHc
Q 017982 262 ------TA-EEIEKHFG--CQSSQLIMVGDRPFTDIVYGNRN 294 (363)
Q Consensus 262 ------~~-~~alk~lg--l~pee~vmVGDrL~TDI~~A~ra 294 (363)
.. ..+.+.++ .++++|+||||.. +|+.+|.-.
T Consensus 190 ~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~-~Dl~ma~g~ 230 (277)
T TIGR01544 190 TFNKNHDVALRNTEYFNQLKDRSNIILLGDSQ-GDLRMADGV 230 (277)
T ss_pred ccccHHHHHHHHHHHhCccCCcceEEEECcCh-hhhhHhcCC
Confidence 22 24556777 8999999999999 899997644
No 116
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=97.77 E-value=7.8e-05 Score=65.38 Aligned_cols=84 Identities=18% Similarity=0.123 Sum_probs=62.4
Q ss_pred CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEE-----c-c----cC----CCch-----
Q 017982 201 TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIR-----H-R----VK----KPAG----- 261 (363)
Q Consensus 201 ~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~-----~-~----~k----KP~p----- 261 (363)
.+.|++.+.++.++ +.|++++|+|++. ...++.+++.+|++.++ . . .+ +|.+
T Consensus 73 ~~~~g~~~~l~~l~-~~g~~~~ivS~~~--------~~~i~~~~~~~g~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K 143 (177)
T TIGR01488 73 ALRPGARELISWLK-ERGIDTVIVSGGF--------DFFVEPVAEKLGIDDVFANRLEFDDNGLLTGPIEGQVNPEGECK 143 (177)
T ss_pred CcCcCHHHHHHHHH-HCCCEEEEECCCc--------HHHHHHHHHHcCCchheeeeEEECCCCEEeCccCCcccCCcchH
Confidence 45789999999998 5799999999996 35677888888876321 0 0 11 1221
Q ss_pred --hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHc
Q 017982 262 --TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRN 294 (363)
Q Consensus 262 --~~~~alk~lgl~pee~vmVGDrL~TDI~~A~ra 294 (363)
.+.++++.++++++++++|||+. +|+.+++.+
T Consensus 144 ~~~l~~~~~~~~~~~~~~~~iGDs~-~D~~~~~~a 177 (177)
T TIGR01488 144 GKVLKELLEESKITLKKIIAVGDSV-NDLPMLKLA 177 (177)
T ss_pred HHHHHHHHHHhCCCHHHEEEEeCCH-HHHHHHhcC
Confidence 24566677889999999999998 899998753
No 117
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=97.75 E-value=0.00015 Score=67.17 Aligned_cols=89 Identities=11% Similarity=0.055 Sum_probs=65.7
Q ss_pred CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEc--------c-------cCCCchh-H
Q 017982 200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRH--------R-------VKKPAGT-A 263 (363)
Q Consensus 200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~--------~-------~kKP~p~-~ 263 (363)
..++|++.++|+.+++ .| +++|+|++. ...++.+++.+|++.++. + ..||.+. .
T Consensus 67 i~l~pga~ell~~lk~-~~-~~~IVS~~~--------~~~~~~il~~lgi~~~~an~l~~~~~g~~tG~~~~~~~~K~~~ 136 (203)
T TIGR02137 67 LKPLEGAVEFVDWLRE-RF-QVVILSDTF--------YEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQS 136 (203)
T ss_pred CCCCccHHHHHHHHHh-CC-eEEEEeCCh--------HHHHHHHHHHcCCchhhceeeEEecCCeeECeeecCcchHHHH
Confidence 4679999999999985 45 999999996 367888999999874321 1 2344442 2
Q ss_pred HHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEc
Q 017982 264 EEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTE 302 (363)
Q Consensus 264 ~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~ 302 (363)
.+.++..+ .++++|||.. +|+.++..+|+..++-.
T Consensus 137 l~~l~~~~---~~~v~vGDs~-nDl~ml~~Ag~~ia~~a 171 (203)
T TIGR02137 137 VIAFKSLY---YRVIAAGDSY-NDTTMLSEAHAGILFHA 171 (203)
T ss_pred HHHHHhhC---CCEEEEeCCH-HHHHHHHhCCCCEEecC
Confidence 33334544 3899999999 89999999999876654
No 118
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=97.60 E-value=0.00051 Score=75.16 Aligned_cols=108 Identities=19% Similarity=0.233 Sum_probs=83.3
Q ss_pred HHHHHcCCCEEEEcCCceeec--CCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEE
Q 017982 176 AELQRRGFKGVVFDKDNTLTA--PYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIR 253 (363)
Q Consensus 176 ~~L~~~GIkaVV~DlDnTL~~--~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~ 253 (363)
+.+.+.|.+++.+-.|+++.. .-...+.|++.+.+++|+ +.|++++++|+.. ...++.+.+.+|+++..
T Consensus 541 ~~~~~~g~~~v~va~~~~~~g~i~l~d~~r~~a~~~i~~L~-~~gi~~~llTGd~--------~~~a~~ia~~lgi~~~~ 611 (741)
T PRK11033 541 NELESAGKTVVLVLRNDDVLGLIALQDTLRADARQAISELK-ALGIKGVMLTGDN--------PRAAAAIAGELGIDFRA 611 (741)
T ss_pred HHHHhCCCEEEEEEECCEEEEEEEEecCCchhHHHHHHHHH-HCCCEEEEEcCCC--------HHHHHHHHHHcCCCeec
Confidence 356678999888888888764 245678999999999998 5899999999985 47889999999998653
Q ss_pred cccCCCchhHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCe
Q 017982 254 HRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFL 297 (363)
Q Consensus 254 ~~~kKP~p~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~ 297 (363)
.-.|.... .+++.++ .++.++||||.+ .|+.+.+.+++.
T Consensus 612 --~~~p~~K~-~~v~~l~-~~~~v~mvGDgi-NDapAl~~A~vg 650 (741)
T PRK11033 612 --GLLPEDKV-KAVTELN-QHAPLAMVGDGI-NDAPAMKAASIG 650 (741)
T ss_pred --CCCHHHHH-HHHHHHh-cCCCEEEEECCH-HhHHHHHhCCee
Confidence 23454322 2445555 346899999999 899999999843
No 119
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=97.59 E-value=0.00039 Score=66.01 Aligned_cols=60 Identities=12% Similarity=0.121 Sum_probs=46.4
Q ss_pred CCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe
Q 017982 183 FKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK 250 (363)
Q Consensus 183 IkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~ 250 (363)
++++++|+|+||.. .....|++.++|++|+ +.|++++++||+.+.. ...+...++.+|++
T Consensus 1 ~~~~~~D~DGtl~~--~~~~i~~a~~~l~~l~-~~g~~~~~~Tnn~~r~-----~~~~~~~l~~~g~~ 60 (249)
T TIGR01457 1 YKGYLIDLDGTMYK--GKERIPEAETFVHELQ-KRDIPYLFVTNNSTRT-----PESVAEMLASFDIP 60 (249)
T ss_pred CCEEEEeCCCceEc--CCeeCcCHHHHHHHHH-HCCCeEEEEeCCCCCC-----HHHHHHHHHHcCCC
Confidence 57899999999964 4456789999999998 5799999999987422 34455566677775
No 120
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=97.55 E-value=0.00022 Score=70.18 Aligned_cols=60 Identities=20% Similarity=0.160 Sum_probs=48.9
Q ss_pred CCCEEEEcCCceeecCCCC-Cc-chhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe
Q 017982 182 GFKGVVFDKDNTLTAPYSL-TL-WGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK 250 (363)
Q Consensus 182 GIkaVV~DlDnTL~~~~~~-~~-~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~ 250 (363)
-.++++||+|+||...... .+ .|++.++|++|+ +.|++++|+||+. ...+...++.+|+.
T Consensus 125 ~~kvIvFDLDgTLi~~~~~v~irdPgV~EaL~~Lk-ekGikLaIaTS~~--------Re~v~~~L~~lGLd 186 (301)
T TIGR01684 125 PPHVVVFDLDSTLITDEEPVRIRDPRIYDSLTELK-KRGCILVLWSYGD--------RDHVVESMRKVKLD 186 (301)
T ss_pred cceEEEEecCCCCcCCCCccccCCHHHHHHHHHHH-HCCCEEEEEECCC--------HHHHHHHHHHcCCC
Confidence 3578999999999864321 13 599999999998 6799999999996 36777889999987
No 121
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=97.54 E-value=0.00032 Score=66.96 Aligned_cols=62 Identities=11% Similarity=0.104 Sum_probs=46.5
Q ss_pred CCEEEEcCCceeecCCC--CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe
Q 017982 183 FKGVVFDKDNTLTAPYS--LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK 250 (363)
Q Consensus 183 IkaVV~DlDnTL~~~~~--~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~ 250 (363)
++++++|+|+||..... ..+.|++.++|++|+ +.|++++++||++... ...+...++.+|++
T Consensus 1 ~k~i~~D~DGtl~~~~~~~~~~~~~a~~al~~l~-~~G~~~~~~Tn~~~~~-----~~~~~~~l~~~g~~ 64 (257)
T TIGR01458 1 VKGVLLDISGVLYISDAKSGVAVPGSQEAVKRLR-GASVKVRFVTNTTKES-----KQDLLERLQRLGFD 64 (257)
T ss_pred CCEEEEeCCCeEEeCCCcccCcCCCHHHHHHHHH-HCCCeEEEEECCCCCC-----HHHHHHHHHHcCCC
Confidence 57899999999964222 127899999999998 5799999999997421 23445555667775
No 122
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=97.51 E-value=0.00077 Score=65.62 Aligned_cols=63 Identities=17% Similarity=0.258 Sum_probs=48.3
Q ss_pred cCCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe
Q 017982 181 RGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK 250 (363)
Q Consensus 181 ~GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~ 250 (363)
..++++++|+|+||. .....+|++.++|++|+ +.|++++++||++...+ ...++++....+++
T Consensus 6 ~~y~~~l~DlDGvl~--~G~~~ipga~e~l~~L~-~~g~~~iflTNn~~~s~----~~~~~~L~~~~~~~ 68 (269)
T COG0647 6 DKYDGFLFDLDGVLY--RGNEAIPGAAEALKRLK-AAGKPVIFLTNNSTRSR----EVVAARLSSLGGVD 68 (269)
T ss_pred hhcCEEEEcCcCceE--eCCccCchHHHHHHHHH-HcCCeEEEEeCCCCCCH----HHHHHHHHhhcCCC
Confidence 367899999999995 77888999999999998 68999999999985321 22444554435553
No 123
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=97.45 E-value=0.00085 Score=63.32 Aligned_cols=40 Identities=18% Similarity=0.091 Sum_probs=35.5
Q ss_pred hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHc-------CCeEEEEc
Q 017982 262 TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRN-------GFLTILTE 302 (363)
Q Consensus 262 ~~~~alk~lgl~pee~vmVGDrL~TDI~~A~ra-------Gi~TIlV~ 302 (363)
.+..+++.++..+.+++||||+. ||+.+++.+ |..+|.|.
T Consensus 171 a~~~~~~~~~~~~~~~i~iGD~~-~D~~~~~~~~~~~~~~g~~~v~v~ 217 (244)
T TIGR00685 171 IVKRLLWHQPGSGISPVYLGDDI-TDEDAFRVVNNQWGNYGFYPVPIG 217 (244)
T ss_pred HHHHHHHhcccCCCceEEEcCCC-cHHHHHHHHhcccCCCCeEEEEEe
Confidence 35788888899999999999998 899999988 78899995
No 124
>PRK10444 UMP phosphatase; Provisional
Probab=97.45 E-value=0.00052 Score=65.53 Aligned_cols=60 Identities=13% Similarity=0.108 Sum_probs=45.5
Q ss_pred CCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe
Q 017982 183 FKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK 250 (363)
Q Consensus 183 IkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~ 250 (363)
|+.+++|+|+||.. ...+.|++.++++.|+ +.|.+++++||+.... ......-++.+|++
T Consensus 1 ~~~v~~DlDGtL~~--~~~~~p~a~~~l~~L~-~~g~~~~~~Tn~~~~~-----~~~~~~~l~~~G~~ 60 (248)
T PRK10444 1 IKNVICDIDGVLMH--DNVAVPGAAEFLHRIL-DKGLPLVLLTNYPSQT-----GQDLANRFATAGVD 60 (248)
T ss_pred CcEEEEeCCCceEe--CCeeCccHHHHHHHHH-HCCCeEEEEeCCCCCC-----HHHHHHHHHHcCCC
Confidence 67899999999964 4478999999999998 5799999999997421 22333334566774
No 125
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=97.40 E-value=0.00059 Score=63.68 Aligned_cols=81 Identities=17% Similarity=0.178 Sum_probs=60.8
Q ss_pred CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeE--EE------------c----------c
Q 017982 200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV--IR------------H----------R 255 (363)
Q Consensus 200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~--I~------------~----------~ 255 (363)
..+.|++.+....|+ +.|..++++|..- ...+..+...|||++ ++ . +
T Consensus 87 ~~lT~Gi~eLv~~L~-~~~~~v~liSGGF--------~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsds 157 (227)
T KOG1615|consen 87 PTLTPGIRELVSRLH-ARGTQVYLISGGF--------RQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTNEPTSDS 157 (227)
T ss_pred CccCCCHHHHHHHHH-HcCCeEEEEcCCh--------HHHHHHHHHHhCCcHhhhhhheeeeccCCcccccccCCccccC
Confidence 357899999999998 6799999999884 478889999999985 22 0 1
Q ss_pred cCCCchhHHHHHHHhCCCCCcEEEEccCCcccHHHHHH
Q 017982 256 VKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNR 293 (363)
Q Consensus 256 ~kKP~p~~~~alk~lgl~pee~vmVGDrL~TDI~~A~r 293 (363)
.+|+.. +..+ ++ +.+.+.++||||-- ||+.+..-
T Consensus 158 ggKa~~-i~~l-rk-~~~~~~~~mvGDGa-tDlea~~p 191 (227)
T KOG1615|consen 158 GGKAEV-IALL-RK-NYNYKTIVMVGDGA-TDLEAMPP 191 (227)
T ss_pred CccHHH-HHHH-Hh-CCChheeEEecCCc-cccccCCc
Confidence 234332 2223 23 88999999999998 99988655
No 126
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=97.32 E-value=0.00082 Score=63.27 Aligned_cols=58 Identities=17% Similarity=0.294 Sum_probs=43.8
Q ss_pred EEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe
Q 017982 186 VVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK 250 (363)
Q Consensus 186 VV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~ 250 (363)
++||+|+||. .....+|++.++|+.++ ..|+++.++||+.+.. ....++.+.+.+|++
T Consensus 1 ~lfD~DGvL~--~~~~~~~~a~e~i~~l~-~~g~~~~~~tN~~~~~----~~~~~~~l~~~~g~~ 58 (236)
T TIGR01460 1 FLFDIDGVLW--LGHKPIPGAAEALNRLR-AKGKPVVFLTNNSSRS----EEDYAEKLSSLLGVD 58 (236)
T ss_pred CEEeCcCccC--cCCccCcCHHHHHHHHH-HCCCeEEEEECCCCCC----HHHHHHHHHHhcCCC
Confidence 4799999995 45667899999999998 5799999999998522 233445555546765
No 127
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=97.31 E-value=0.0024 Score=60.13 Aligned_cols=41 Identities=15% Similarity=0.206 Sum_probs=36.1
Q ss_pred hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcC
Q 017982 262 TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEP 303 (363)
Q Consensus 262 ~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p 303 (363)
+++.+++.+|++++++++|||+. .|+.+.+.+|..++.|.-
T Consensus 171 al~~l~~~~~i~~~~~i~~GD~~-ND~~ml~~~~~~~va~~n 211 (249)
T TIGR01485 171 ALQYLLQKLAMEPSQTLVCGDSG-NDIELFEIGSVRGVIVSN 211 (249)
T ss_pred HHHHHHHHcCCCccCEEEEECCh-hHHHHHHccCCcEEEECC
Confidence 45788899999999999999999 799999998888888853
No 128
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=97.29 E-value=0.0016 Score=67.64 Aligned_cols=96 Identities=19% Similarity=0.301 Sum_probs=60.1
Q ss_pred chhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHH-hCC------e------EEEcccCCC----------
Q 017982 203 WGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGK-IGI------K------VIRHRVKKP---------- 259 (363)
Q Consensus 203 ~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~-LGi------~------~I~~~~kKP---------- 259 (363)
.|.+..||++|+ +.|.+++++||+. -..+..++.- +|- + +|...++||
T Consensus 185 ~~~l~~~L~~lr-~~GKklFLiTNS~--------~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~A~KP~FF~~~~pfr 255 (448)
T PF05761_consen 185 DPKLPPWLERLR-SAGKKLFLITNSP--------FDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVDARKPGFFTEGRPFR 255 (448)
T ss_dssp -CHHHHHHHHHH-CCT-EEEEE-SS---------HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES--CCHHHCT---EE
T ss_pred CchHHHHHHHHH-hcCceEEEecCCC--------CchhhhhhhhccCCCCCCCCChhhheeEEEEcCCCCcccCCCCceE
Confidence 467889999999 6899999999996 2334333332 333 1 222112222
Q ss_pred --------------------ch----h-HHHHHHHhCCCCCcEEEEccCCcccHHHHHHc-CCeEEEEcCCCCC
Q 017982 260 --------------------AG----T-AEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRN-GFLTILTEPLSLA 307 (363)
Q Consensus 260 --------------------~p----~-~~~alk~lgl~pee~vmVGDrL~TDI~~A~ra-Gi~TIlV~p~~~~ 307 (363)
.. + ...+.+.+|....++++|||.++.||...+.. |.+|++|-|--..
T Consensus 256 ~vd~~~g~l~~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDhi~~Di~~~k~~~gWrT~~Ii~ELe~ 329 (448)
T PF05761_consen 256 EVDTETGKLKWGKYVGPLEKGKVYSGGNWDQLHKLLGWRGKEVLYFGDHIYGDILKSKKRHGWRTAAIIPELEQ 329 (448)
T ss_dssp EEETTTSSEECS---SS--TC-EEEE--HHHHHHHCT--GGGEEEEESSTTTTHHHHHHHH-SEEEEE-TTHHH
T ss_pred EEECCCCccccccccccccCCCEeecCCHHHHHHHHccCCCeEEEECCchhhhhhhhccccceEEEEEehhhhh
Confidence 11 1 35677778888899999999999999999876 9999999876544
No 129
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=97.27 E-value=0.0014 Score=73.01 Aligned_cols=110 Identities=15% Similarity=0.167 Sum_probs=80.2
Q ss_pred HHHHHcCCCEEEEcCCc-----eeec--CCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhC
Q 017982 176 AELQRRGFKGVVFDKDN-----TLTA--PYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIG 248 (363)
Q Consensus 176 ~~L~~~GIkaVV~DlDn-----TL~~--~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LG 248 (363)
+.+.+.|.+++.+-.++ ++.. .-...+.|++.++++.|+ +.|+++.++|+.. ...+..+.+.+|
T Consensus 496 ~~~a~~G~rvl~~A~~~~~~~l~~lGli~l~Dp~r~~~~~~i~~l~-~~Gi~v~miTGD~--------~~tA~~ia~~~G 566 (884)
T TIGR01522 496 AEMASAGLRVIAFASGPEKGQLTFLGLVGINDPPRPGVKEAVTTLI-TGGVRIIMITGDS--------QETAVSIARRLG 566 (884)
T ss_pred HHHHhcCCEEEEEEEEcCCCCeEEEEEEeccCcchhHHHHHHHHHH-HCCCeEEEECCCC--------HHHHHHHHHHcC
Confidence 34667899988775443 4432 245678999999999998 6899999999986 467888999999
Q ss_pred Ce---------------------------EEEcccCCCchhHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCe
Q 017982 249 IK---------------------------VIRHRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFL 297 (363)
Q Consensus 249 i~---------------------------~I~~~~kKP~p~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~ 297 (363)
+. .++. ...|... ..+++.++-..+.++||||.. +|+.+.++|++.
T Consensus 567 i~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfa-r~~P~~K-~~iv~~lq~~g~~v~mvGDGv-ND~pAl~~AdVG 639 (884)
T TIGR01522 567 MPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFA-RASPEHK-MKIVKALQKRGDVVAMTGDGV-NDAPALKLADIG 639 (884)
T ss_pred CCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEE-ECCHHHH-HHHHHHHHHCCCEEEEECCCc-ccHHHHHhCCee
Confidence 85 1322 2355543 234444444458899999999 899999999963
No 130
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=97.25 E-value=0.00071 Score=66.73 Aligned_cols=59 Identities=17% Similarity=0.113 Sum_probs=48.5
Q ss_pred CCCEEEEcCCceeecCCCCCc---chhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe
Q 017982 182 GFKGVVFDKDNTLTAPYSLTL---WGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK 250 (363)
Q Consensus 182 GIkaVV~DlDnTL~~~~~~~~---~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~ 250 (363)
-.+.++||+|+||... ...+ .|++.++|++|+ +.|++++|+||+. ...+..+++.+|+.
T Consensus 127 ~~~~i~~D~D~TL~~~-~~~v~irdp~V~EtL~eLk-ekGikLaIvTNg~--------Re~v~~~Le~lgL~ 188 (303)
T PHA03398 127 IPHVIVFDLDSTLITD-EEPVRIRDPFVYDSLDELK-ERGCVLVLWSYGN--------REHVVHSLKETKLE 188 (303)
T ss_pred eccEEEEecCCCccCC-CCccccCChhHHHHHHHHH-HCCCEEEEEcCCC--------hHHHHHHHHHcCCC
Confidence 3478999999999864 3333 599999999998 6899999999996 36678888888886
No 131
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=97.21 E-value=0.0059 Score=58.76 Aligned_cols=45 Identities=16% Similarity=0.158 Sum_probs=36.1
Q ss_pred CEEEEcCCceeecC----CCCCcchhHHHHHHHHHHhCCCeEEEEeCCC
Q 017982 184 KGVVFDKDNTLTAP----YSLTLWGPLSSSIEQCKSVFGHDIAVFSNSA 228 (363)
Q Consensus 184 kaVV~DlDnTL~~~----~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~ 228 (363)
.++++|+|+||... ....+.+++.++|++|++..|+.++|+|..+
T Consensus 15 ~li~~D~DGTLl~~~~~p~~~~i~~~~~~~L~~L~~~~g~~v~i~SGR~ 63 (266)
T PRK10187 15 YAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATANDGALALISGRS 63 (266)
T ss_pred EEEEEecCCCCCCCCCCcccccCCHHHHHHHHHHHhCCCCcEEEEeCCC
Confidence 57889999999863 3446789999999999843688899888776
No 132
>COG4996 Predicted phosphatase [General function prediction only]
Probab=97.11 E-value=0.003 Score=55.79 Aligned_cols=97 Identities=22% Similarity=0.316 Sum_probs=68.5
Q ss_pred CEEEEcCCceeecCCC-----------------------CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHH
Q 017982 184 KGVVFDKDNTLTAPYS-----------------------LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKA 240 (363)
Q Consensus 184 kaVV~DlDnTL~~~~~-----------------------~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a 240 (363)
++++||.|+|+-..++ ..++|.+++.++.++ ..|+-+..+|-+. ...+
T Consensus 1 ~~i~~d~d~t~wdhh~iSsl~pPf~rVs~n~i~Ds~G~ev~L~~~v~~~l~war-nsG~i~~~~sWN~--------~~kA 71 (164)
T COG4996 1 RAIVFDADKTLWDHHNISSLEPPFRRVSSNTIEDSKGREVHLFPDVKETLKWAR-NSGYILGLASWNF--------EDKA 71 (164)
T ss_pred CcEEEeCCCcccccccchhcCCcceecCccceecCCCeEEEEcHHHHHHHHHHH-hCCcEEEEeecCc--------hHHH
Confidence 3678888888753211 136899999999988 6899999999775 3667
Q ss_pred HHHHHHhCCeEEEc-ccCCCch-h--H-HHHHHHh------CCCCCcEEEEccCCcccHHHHH
Q 017982 241 RKLEGKIGIKVIRH-RVKKPAG-T--A-EEIEKHF------GCQSSQLIMVGDRPFTDIVYGN 292 (363)
Q Consensus 241 ~~i~~~LGi~~I~~-~~kKP~p-~--~-~~alk~l------gl~pee~vmVGDrL~TDI~~A~ 292 (363)
-..++.+++..+++ -+-+|.| . | -+++..+ .++|++++++.|+ ||..++
T Consensus 72 ~~aLral~~~~yFhy~ViePhP~K~~ML~~llr~i~~er~~~ikP~~Ivy~DDR---~iH~~~ 131 (164)
T COG4996 72 IKALRALDLLQYFHYIVIEPHPYKFLMLSQLLREINTERNQKIKPSEIVYLDDR---RIHFGN 131 (164)
T ss_pred HHHHHHhchhhhEEEEEecCCChhHHHHHHHHHHHHHhhccccCcceEEEEecc---cccHHH
Confidence 77888888874432 2457887 2 3 3455544 4799999999997 455554
No 133
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=97.07 E-value=0.0022 Score=61.14 Aligned_cols=114 Identities=18% Similarity=0.082 Sum_probs=69.1
Q ss_pred HcCCCEEEEcCCceeec-------------------C------CCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCC
Q 017982 180 RRGFKGVVFDKDNTLTA-------------------P------YSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYD 234 (363)
Q Consensus 180 ~~GIkaVV~DlDnTL~~-------------------~------~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~d 234 (363)
..|..++|||+|.|+.. | ......|++.+++++++ +.|++|+++|+.+..
T Consensus 74 ~dg~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l~-~~G~~Vf~lTGR~e~---- 148 (229)
T TIGR01675 74 GDGMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKII-ELGIKIFLLSGRWEE---- 148 (229)
T ss_pred CCCCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHHH-HCCCEEEEEcCCChH----
Confidence 35888999999999753 1 12246789999999998 689999999999621
Q ss_pred ccHHHHHHHHHHhCCeE---EEcc----cCCCchhHH-HHHHHhCCCCCc-EEEEccCCcccHHHHHHcCCeEEEE
Q 017982 235 NDASKARKLEGKIGIKV---IRHR----VKKPAGTAE-EIEKHFGCQSSQ-LIMVGDRPFTDIVYGNRNGFLTILT 301 (363)
Q Consensus 235 p~~~~a~~i~~~LGi~~---I~~~----~kKP~p~~~-~alk~lgl~pee-~vmVGDrL~TDI~~A~raGi~TIlV 301 (363)
.......-+...|.+. +... ..|....++ ...+++--..-+ +.+|||++ .|+.++. +|.+|.-+
T Consensus 149 -~r~~T~~nL~~~G~~~~~~LiLR~~~d~~~~~~~yKs~~R~~l~~~GYrIv~~iGDq~-sDl~G~~-~~~RtFKL 221 (229)
T TIGR01675 149 -LRNATLDNLINAGFTGWKHLILRGLEDSNKTVVTYKSEVRKSLMEEGYRIWGNIGDQW-SDLLGSP-PGRRTFKL 221 (229)
T ss_pred -HHHHHHHHHHHcCCCCcCeeeecCCCCCCchHhHHHHHHHHHHHhCCceEEEEECCCh-HHhcCCC-ccCceeeC
Confidence 1122445556678763 2211 122221222 222222222223 45899999 7997764 56565544
No 134
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=97.02 E-value=0.0034 Score=56.07 Aligned_cols=78 Identities=14% Similarity=0.194 Sum_probs=54.7
Q ss_pred cchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeE-EE-----c--ccCCCchhHHHHHHHhCCC
Q 017982 202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV-IR-----H--RVKKPAGTAEEIEKHFGCQ 273 (363)
Q Consensus 202 ~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~-I~-----~--~~kKP~p~~~~alk~lgl~ 273 (363)
.+|++.++|++|++ ++.++|+||+. ...+..+++.++..- ++ . .+..+. .+.+-..++.+
T Consensus 59 ~rPgv~efL~~l~~--~yel~I~T~~~--------~~yA~~vl~~ldp~~~~F~~ri~~rd~~~~~~--~KdL~~i~~~d 126 (156)
T TIGR02250 59 LRPFLHEFLKEASK--LYEMHVYTMGT--------RAYAQAIAKLIDPDGKYFGDRIISRDESGSPH--TKSLLRLFPAD 126 (156)
T ss_pred ECCCHHHHHHHHHh--hcEEEEEeCCc--------HHHHHHHHHHhCcCCCeeccEEEEeccCCCCc--cccHHHHcCCC
Confidence 47999999999983 58999999996 467888888887651 21 1 111111 22222446889
Q ss_pred CCcEEEEccCCcccHHHHHH
Q 017982 274 SSQLIMVGDRPFTDIVYGNR 293 (363)
Q Consensus 274 pee~vmVGDrL~TDI~~A~r 293 (363)
.+.+++|.|+. |+...+.
T Consensus 127 ~~~vvivDd~~--~~~~~~~ 144 (156)
T TIGR02250 127 ESMVVIIDDRE--DVWPWHK 144 (156)
T ss_pred cccEEEEeCCH--HHhhcCc
Confidence 99999999987 6776654
No 135
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=97.01 E-value=0.0023 Score=63.17 Aligned_cols=104 Identities=15% Similarity=0.272 Sum_probs=68.2
Q ss_pred EEEEcCCceeecCCCCCcchhHHHHHHHHHHhC----CCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEcccCCCc
Q 017982 185 GVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVF----GHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPA 260 (363)
Q Consensus 185 aVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~----Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~~~kKP~ 260 (363)
+++||+|+||. ....+.|++.++++.|+ .. |+++.++||+.+.. ....++.+.+.+|+++-....--+.
T Consensus 2 ~~ifD~DGvL~--~g~~~i~ga~eal~~L~-~~~~~~g~~~~flTNn~g~s----~~~~~~~l~~~lG~~~~~~~i~~s~ 74 (321)
T TIGR01456 2 GFAFDIDGVLF--RGKKPIAGASDALRRLN-RNQGQLKIPYIFLTNGGGFS----ERARAEEISSLLGVDVSPLQVIQSH 74 (321)
T ss_pred EEEEeCcCceE--CCccccHHHHHHHHHHh-ccccccCCCEEEEecCCCCC----HHHHHHHHHHHcCCCCCHHHHHhhh
Confidence 58999999995 56666999999999998 45 99999999997532 2345666668888863110011111
Q ss_pred hhHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEE
Q 017982 261 GTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTIL 300 (363)
Q Consensus 261 p~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIl 300 (363)
..+...++.++ ..+++||-.-. ...+...|+..+.
T Consensus 75 ~~~~~ll~~~~---~~v~viG~~~~--~~~l~~~G~~~vv 109 (321)
T TIGR01456 75 SPYKSLVNKYE---KRILAVGTGSV--RGVAEGYGFQNVV 109 (321)
T ss_pred HHHHHHHHHcC---CceEEEeChHH--HHHHHHcCCcccc
Confidence 22334444442 26888887643 5555578877653
No 136
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=96.98 E-value=0.0019 Score=61.77 Aligned_cols=59 Identities=19% Similarity=0.191 Sum_probs=48.5
Q ss_pred CCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe
Q 017982 182 GFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK 250 (363)
Q Consensus 182 GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~ 250 (363)
.+|.+++|+|+||... .....+++.++|++|+ +.|++++|+|+.. ...+..+.+.+|+.
T Consensus 3 ~~kli~~DlDGTLl~~-~~~~~~~~~~ai~~l~-~~Gi~~~iaTgR~--------~~~~~~~~~~l~l~ 61 (273)
T PRK00192 3 MKLLVFTDLDGTLLDH-HTYSYEPAKPALKALK-EKGIPVIPCTSKT--------AAEVEVLRKELGLE 61 (273)
T ss_pred cceEEEEcCcccCcCC-CCcCcHHHHHHHHHHH-HCCCEEEEEcCCC--------HHHHHHHHHHcCCC
Confidence 5889999999999853 3456788999999998 6899999999996 35567778888865
No 137
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=96.93 E-value=0.0055 Score=56.88 Aligned_cols=96 Identities=20% Similarity=0.261 Sum_probs=70.1
Q ss_pred CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHH----hCCeE----EE--cccCCCch-hHHHHHH
Q 017982 200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGK----IGIKV----IR--HRVKKPAG-TAEEIEK 268 (363)
Q Consensus 200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~----LGi~~----I~--~~~kKP~p-~~~~alk 268 (363)
..+||++.++|++.+ +.|++++|-|... -.++.+.-. .++.- .+ .-.+|-.. .+.+++.
T Consensus 102 ahlypDav~~ik~wk-~~g~~vyiYSSGS---------V~AQkL~Fghs~agdL~~lfsGyfDttiG~KrE~~SY~kIa~ 171 (229)
T COG4229 102 AHLYPDAVQAIKRWK-ALGMRVYIYSSGS---------VKAQKLFFGHSDAGDLNSLFSGYFDTTIGKKRESQSYAKIAG 171 (229)
T ss_pred cccCHhHHHHHHHHH-HcCCcEEEEcCCC---------chhHHHhhcccccccHHhhhcceeeccccccccchhHHHHHH
Confidence 358999999999998 6899999999886 223322211 11110 01 11234444 5889999
Q ss_pred HhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEc-CCCC
Q 017982 269 HFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTE-PLSL 306 (363)
Q Consensus 269 ~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~-p~~~ 306 (363)
..|++|.+++++-|.. ..+.+|+.+||.|+++. |++.
T Consensus 172 ~iGl~p~eilFLSDn~-~EL~AA~~vGl~t~l~~R~g~~ 209 (229)
T COG4229 172 DIGLPPAEILFLSDNP-EELKAAAGVGLATGLAVRPGNA 209 (229)
T ss_pred hcCCCchheEEecCCH-HHHHHHHhcchheeeeecCCCC
Confidence 9999999999999999 68999999999999885 5543
No 138
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=96.89 E-value=0.013 Score=52.21 Aligned_cols=113 Identities=19% Similarity=0.176 Sum_probs=68.3
Q ss_pred EEEEcCCceeecCCC----------CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHH-----hCC
Q 017982 185 GVVFDKDNTLTAPYS----------LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGK-----IGI 249 (363)
Q Consensus 185 aVV~DlDnTL~~~~~----------~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~-----LGi 249 (363)
+|++|+|+||+.... ....|++.+++++++ +.|++++++|..+- ......+.++.. .++
T Consensus 1 iVisDIDGTL~~sd~~~~~~~~~~~~~~~~~~~~a~~~l~-~~G~~ivy~TGRp~-----~~~~~t~~~l~~~~~~~~~l 74 (157)
T smart00775 1 IVISDIDGTITKSDVLGHVVPIIGKDWTHPGVAKLYRDIQ-NNGYKILYLTARPI-----GQADRTRSYLSQIKQDGHNL 74 (157)
T ss_pred CEEEecCCCCcccccccccccccccCcCCHHHHHHHHHHH-HcCCeEEEEcCCcH-----HHHHHHHHHHHHhhhccccC
Confidence 378999999986431 356899999999998 68999999999962 011223455555 335
Q ss_pred e---EEEc------------ccCCCch-h---HHHHHHHhCCCCCcEE-EEccCCcccHHHHHHcCCe---EEEEcCC
Q 017982 250 K---VIRH------------RVKKPAG-T---AEEIEKHFGCQSSQLI-MVGDRPFTDIVYGNRNGFL---TILTEPL 304 (363)
Q Consensus 250 ~---~I~~------------~~kKP~p-~---~~~alk~lgl~pee~v-mVGDrL~TDI~~A~raGi~---TIlV~p~ 304 (363)
+ ++.. -.++|.. . +..+.+.+.-.--..+ -+||+. +|+.+=..+|+. ...|.+.
T Consensus 75 p~g~li~~~g~~~~~~~~e~i~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~-~D~~~y~~~gi~~~~i~~i~~~ 151 (157)
T smart00775 75 PHGPVLLSPDRLFAALHREVISKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRI-TDVISYSAVGIPPSRIFTINPK 151 (157)
T ss_pred CCceEEEcCCcchhhhhcccccCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCc-hhHHHHHHcCCChhhEEEECCC
Confidence 3 2210 0233422 1 1223332221122333 477777 999999999996 3444443
No 139
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=96.78 E-value=0.0018 Score=61.31 Aligned_cols=103 Identities=17% Similarity=0.102 Sum_probs=63.7
Q ss_pred cCCCEEEEcCCceeec-------------------C------CCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCc
Q 017982 181 RGFKGVVFDKDNTLTA-------------------P------YSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDN 235 (363)
Q Consensus 181 ~GIkaVV~DlDnTL~~-------------------~------~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp 235 (363)
.+..+||||+|.|+.. | ......|++.++++.++ +.|++|+++||....
T Consensus 70 ~~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~~~~~~aip~a~~l~~~~~-~~G~~V~~iT~R~~~----- 143 (229)
T PF03767_consen 70 DKPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVASGKAPAIPGALELYNYAR-SRGVKVFFITGRPES----- 143 (229)
T ss_dssp TSEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHHCTGGEEETTHHHHHHHHH-HTTEEEEEEEEEETT-----
T ss_pred CCCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHhcccCcccHHHHHHHHHHH-HCCCeEEEEecCCch-----
Confidence 5778999999999642 1 11145788999999998 689999999998631
Q ss_pred cHHHHHHHHHHhCCeE----EEcccCCCc----h----hHHHHHHHhCCCCCcEEEEccCCcccHHHHH
Q 017982 236 DASKARKLEGKIGIKV----IRHRVKKPA----G----TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGN 292 (363)
Q Consensus 236 ~~~~a~~i~~~LGi~~----I~~~~kKP~----p----~~~~alk~lgl~pee~vmVGDrL~TDI~~A~ 292 (363)
.......-+...|.+. +....+.+. . .-++.+++-|.. =+++|||++ .|+.+++
T Consensus 144 ~r~~T~~nL~~~G~~~~~~l~lr~~~~~~~~~~~~yK~~~r~~i~~~Gy~--Ii~~iGD~~-~D~~~~~ 209 (229)
T PF03767_consen 144 QREATEKNLKKAGFPGWDHLILRPDKDPSKKSAVEYKSERRKEIEKKGYR--IIANIGDQL-SDFSGAK 209 (229)
T ss_dssp CHHHHHHHHHHHTTSTBSCGEEEEESSTSS------SHHHHHHHHHTTEE--EEEEEESSG-GGCHCTH
T ss_pred hHHHHHHHHHHcCCCccchhccccccccccccccccchHHHHHHHHcCCc--EEEEeCCCH-HHhhccc
Confidence 2334445556667652 211111101 1 112333333321 277999999 7999943
No 140
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=96.77 E-value=0.0047 Score=58.07 Aligned_cols=59 Identities=10% Similarity=0.187 Sum_probs=47.9
Q ss_pred CCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe
Q 017982 182 GFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK 250 (363)
Q Consensus 182 GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~ 250 (363)
.+|.+++|+|+||.. ....+.|...++|++++ +.|+.++|+|... ...+..+.+.+++.
T Consensus 2 ~~kli~~DlDGTLl~-~~~~i~~~~~~ai~~~~-~~G~~~~iaTGR~--------~~~~~~~~~~l~~~ 60 (272)
T PRK10530 2 TYRVIALDLDGTLLT-PKKTILPESLEALARAR-EAGYKVIIVTGRH--------HVAIHPFYQALALD 60 (272)
T ss_pred CccEEEEeCCCceEC-CCCccCHHHHHHHHHHH-HCCCEEEEEcCCC--------hHHHHHHHHhcCCC
Confidence 478999999999986 44467889999999998 5799999999885 24566777777765
No 141
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=96.76 E-value=0.0058 Score=53.10 Aligned_cols=77 Identities=18% Similarity=0.112 Sum_probs=48.7
Q ss_pred CCEEEEcCCceeecCCC-----CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCC-Cc------cHHHHHHHHHHhCCe
Q 017982 183 FKGVVFDKDNTLTAPYS-----LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEY-DN------DASKARKLEGKIGIK 250 (363)
Q Consensus 183 IkaVV~DlDnTL~~~~~-----~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~-dp------~~~~a~~i~~~LGi~ 250 (363)
+|++++|+|+||..... ..+.+++.+.|++++ +.|+.++++|..+..... .. .-......++..+++
T Consensus 1 ~K~i~~DiDGTL~~~~~~~y~~~~~~~~~ie~L~~l~-~~G~~IiiaTGR~~~~~~~n~~~i~~~~~~~t~~wL~k~~ip 79 (126)
T TIGR01689 1 MKRLVMDLDNTITLTENGDYANVAPILAVIEKLRHYK-ALGFEIVISSSRNMRTYEGNVGKINIHTLPIIILWLNQHNVP 79 (126)
T ss_pred CCEEEEeCCCCcccCCCCcccccccCHHHHHHHHHHH-HCCCEEEEECCCCchhhhccccccchhhHHHHHHHHHHcCCC
Confidence 37899999999975321 235679999999987 579999999988632100 00 001345566666777
Q ss_pred EEEcccCCCc
Q 017982 251 VIRHRVKKPA 260 (363)
Q Consensus 251 ~I~~~~kKP~ 260 (363)
+-..-.+||.
T Consensus 80 Yd~l~~~kp~ 89 (126)
T TIGR01689 80 YDEIYVGKPW 89 (126)
T ss_pred CceEEeCCCc
Confidence 5211246663
No 142
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=96.72 E-value=0.0096 Score=64.79 Aligned_cols=110 Identities=14% Similarity=0.168 Sum_probs=82.6
Q ss_pred HHHHHcCCCEEEEcCCceeec--CCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEE
Q 017982 176 AELQRRGFKGVVFDKDNTLTA--PYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIR 253 (363)
Q Consensus 176 ~~L~~~GIkaVV~DlDnTL~~--~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~ 253 (363)
+.+.+.|.+.+.+-.|+++.. .-...+.|++.+.+++|+ +.|++++++|... ...++.+.+.+|++.++
T Consensus 419 ~~~a~~G~r~l~va~~~~~lG~i~l~D~~Rp~a~eaI~~l~-~~Gi~v~miTGD~--------~~ta~~iA~~lGI~~v~ 489 (675)
T TIGR01497 419 DQVARQGGTPLVVCEDNRIYGVIYLKDIVKGGIKERFAQLR-KMGIKTIMITGDN--------RLTAAAIAAEAGVDDFI 489 (675)
T ss_pred HHHHhCCCeEEEEEECCEEEEEEEecccchhHHHHHHHHHH-HCCCEEEEEcCCC--------HHHHHHHHHHcCCCEEE
Confidence 456678999888877777654 245678899999999998 6899999999764 36788999999998654
Q ss_pred cccCCCchhHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCe
Q 017982 254 HRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFL 297 (363)
Q Consensus 254 ~~~kKP~p~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~ 297 (363)
. .-.|.... .+++.+.-..+.++|+||.. .|..+-+.+++.
T Consensus 490 a-~~~PedK~-~~v~~lq~~g~~VamvGDG~-NDapAL~~AdvG 530 (675)
T TIGR01497 490 A-EATPEDKI-ALIRQEQAEGKLVAMTGDGT-NDAPALAQADVG 530 (675)
T ss_pred c-CCCHHHHH-HHHHHHHHcCCeEEEECCCc-chHHHHHhCCEe
Confidence 3 34676533 22333333345799999999 899999998864
No 143
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=96.71 E-value=0.0048 Score=54.49 Aligned_cols=77 Identities=17% Similarity=0.265 Sum_probs=55.5
Q ss_pred hhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeE--EE-ccc----------------C--CCchh
Q 017982 204 GPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV--IR-HRV----------------K--KPAGT 262 (363)
Q Consensus 204 p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~--I~-~~~----------------k--KP~p~ 262 (363)
+++.+.|+.++ +.|++++|+|.+. ...++.+++.+|++. +. ... . |.. .
T Consensus 92 ~~~~e~i~~~~-~~~~~v~IvS~~~--------~~~i~~~~~~~~i~~~~v~~~~~~~~~~~~~~~~~~~~~~~~K~~-~ 161 (192)
T PF12710_consen 92 PDAMELIRELK-DNGIKVVIVSGSP--------DEIIEPIAERLGIDDDNVIGNELFDNGGGIFTGRITGSNCGGKAE-A 161 (192)
T ss_dssp TTHHHHHHHHH-HTTSEEEEEEEEE--------HHHHHHHHHHTTSSEGGEEEEEEECTTCCEEEEEEEEEEESHHHH-H
T ss_pred hhHHHHHHHHH-HCCCEEEEECCCc--------HHHHHHHHHHcCCCceEEEEEeeeecccceeeeeECCCCCCcHHH-H
Confidence 66669999998 5799999999885 478889999999874 22 111 0 211 1
Q ss_pred HHHH---HHHhCCCCCcEEEEccCCcccHHHHH
Q 017982 263 AEEI---EKHFGCQSSQLIMVGDRPFTDIVYGN 292 (363)
Q Consensus 263 ~~~a---lk~lgl~pee~vmVGDrL~TDI~~A~ 292 (363)
+.++ ... +.....+++|||+. +|+.+++
T Consensus 162 l~~~~~~~~~-~~~~~~~~~iGDs~-~D~~~lr 192 (192)
T PF12710_consen 162 LKELYIRDEE-DIDPDRVIAIGDSI-NDLPMLR 192 (192)
T ss_dssp HHHHHHHHHH-THTCCEEEEEESSG-GGHHHHH
T ss_pred HHHHHHHhhc-CCCCCeEEEEECCH-HHHHHhC
Confidence 2333 222 78899999999999 8998864
No 144
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=96.68 E-value=0.0045 Score=58.43 Aligned_cols=58 Identities=14% Similarity=0.198 Sum_probs=47.7
Q ss_pred CCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCC
Q 017982 182 GFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGI 249 (363)
Q Consensus 182 GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi 249 (363)
.+|.+++|+|+||.. ....+.+...++|++++ +.|+.++|+|..+ ...+..+.+.+++
T Consensus 2 ~~kli~~DlDGTLl~-~~~~i~~~~~~ai~~l~-~~G~~~~iaTGR~--------~~~~~~~~~~l~~ 59 (270)
T PRK10513 2 AIKLIAIDMDGTLLL-PDHTISPAVKQAIAAAR-AKGVNVVLTTGRP--------YAGVHRYLKELHM 59 (270)
T ss_pred ceEEEEEecCCcCcC-CCCccCHHHHHHHHHHH-HCCCEEEEecCCC--------hHHHHHHHHHhCC
Confidence 478999999999985 34467899999999998 6899999999886 2456677778876
No 145
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=96.67 E-value=0.0049 Score=58.49 Aligned_cols=58 Identities=16% Similarity=0.201 Sum_probs=48.2
Q ss_pred CCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe
Q 017982 183 FKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK 250 (363)
Q Consensus 183 IkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~ 250 (363)
+|.+++|+|+||... ...+.+...++|++|+ +.|+.++|+|..+ ...+..+.+.++++
T Consensus 2 ~kli~~DlDGTLl~~-~~~i~~~~~~ai~~l~-~~G~~~~iaTGR~--------~~~~~~~~~~l~~~ 59 (272)
T PRK15126 2 ARLAAFDMDGTLLMP-DHHLGEKTLSTLARLR-ERDITLTFATGRH--------VLEMQHILGALSLD 59 (272)
T ss_pred ccEEEEeCCCcCcCC-CCcCCHHHHHHHHHHH-HCCCEEEEECCCC--------HHHHHHHHHHcCCC
Confidence 689999999999863 3468899999999998 5899999999886 35667788888875
No 146
>PRK10976 putative hydrolase; Provisional
Probab=96.61 E-value=0.0055 Score=57.82 Aligned_cols=58 Identities=19% Similarity=0.222 Sum_probs=47.8
Q ss_pred CCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe
Q 017982 183 FKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK 250 (363)
Q Consensus 183 IkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~ 250 (363)
+|.+++|+|+||... ...+.+...++|++++ +.|++++|+|... ...+..+.+.++++
T Consensus 2 ikli~~DlDGTLl~~-~~~is~~~~~ai~~l~-~~G~~~~iaTGR~--------~~~~~~~~~~l~~~ 59 (266)
T PRK10976 2 YQVVASDLDGTLLSP-DHTLSPYAKETLKLLT-ARGIHFVFATGRH--------HVDVGQIRDNLEIK 59 (266)
T ss_pred ceEEEEeCCCCCcCC-CCcCCHHHHHHHHHHH-HCCCEEEEEcCCC--------hHHHHHHHHhcCCC
Confidence 688999999999864 3468899999999998 6899999999886 24566777888875
No 147
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=96.61 E-value=0.0052 Score=58.01 Aligned_cols=59 Identities=15% Similarity=0.203 Sum_probs=49.6
Q ss_pred CCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe
Q 017982 182 GFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK 250 (363)
Q Consensus 182 GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~ 250 (363)
-++.+++|+|+||.. ......+.+.++|++++ +.|++++|+|... ...+..+.+.+++.
T Consensus 2 ~~kli~~DlDGTLl~-~~~~i~~~~~~al~~~~-~~g~~v~iaTGR~--------~~~~~~~~~~l~~~ 60 (264)
T COG0561 2 MIKLLAFDLDGTLLD-SNKTISPETKEALARLR-EKGVKVVLATGRP--------LPDVLSILEELGLD 60 (264)
T ss_pred CeeEEEEcCCCCccC-CCCccCHHHHHHHHHHH-HCCCEEEEECCCC--------hHHHHHHHHHcCCC
Confidence 478999999999987 44448999999999998 5899999999986 25677888888876
No 148
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=96.58 E-value=0.0075 Score=61.31 Aligned_cols=116 Identities=21% Similarity=0.309 Sum_probs=80.9
Q ss_pred cCCCEEEEcCCceeecC----------CCC-CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCC----ccHHHHHHHHH
Q 017982 181 RGFKGVVFDKDNTLTAP----------YSL-TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYD----NDASKARKLEG 245 (363)
Q Consensus 181 ~GIkaVV~DlDnTL~~~----------~~~-~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~d----p~~~~a~~i~~ 245 (363)
.+.+.+-||+|+||..- ..| .+++++..-|+.+. +.||.++|.||+.+..... ....+++.+.+
T Consensus 73 ~~~K~i~FD~dgtlI~t~sg~vf~~~~~dw~~l~~~vp~Klktl~-~~g~~l~iftnq~~i~r~~~~~~~f~~Ki~~i~a 151 (422)
T KOG2134|consen 73 GGSKIIMFDYDGTLIDTKSGKVFPKGSMDWRILFPEVPSKLKTLY-QDGIKLFIFTNQNGIARGKLELEEFKKKIKAIVA 151 (422)
T ss_pred CCcceEEEecCCceeecCCcceeeccCccceeeccccchhhhhhc-cCCeEEEEEecccccccCcchHHHHHHHHHHHHH
Confidence 37788999999999742 222 35788888899987 5799999999998655321 12356778888
Q ss_pred HhCCeEEE------cccCCCchhH-HHHHHHhC----CCCCcEEEEccCC--------------cccHHHHHHcCCe
Q 017982 246 KIGIKVIR------HRVKKPAGTA-EEIEKHFG----CQSSQLIMVGDRP--------------FTDIVYGNRNGFL 297 (363)
Q Consensus 246 ~LGi~~I~------~~~kKP~p~~-~~alk~lg----l~pee~vmVGDrL--------------~TDI~~A~raGi~ 297 (363)
.+|+|+.. ...+||..+| +...+.++ +.-....+|||-. ..|+.+|.++|+.
T Consensus 152 nl~vPi~~~~A~~~~~yRKP~tGMwe~~~~~~nd~~~Isek~s~fvgdaagr~~~~~~~kkd~S~~D~~FAaN~gvk 228 (422)
T KOG2134|consen 152 NLGVPIQLLAAIIKGKYRKPSTGMWEFLKRLENDSVEISEKASIFVGDAAGRPLDALRRKKDHSSADRKFAANAGVK 228 (422)
T ss_pred hcCCceEEeeeccCCcccCcchhHHHHHHHHhhccceeeechhhhhhhhccCccccccCcccccHHHHHHHHhcCCc
Confidence 89999753 2357999876 44443442 3334445777732 3699999999985
No 149
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=96.55 E-value=0.0059 Score=56.01 Aligned_cols=55 Identities=22% Similarity=0.337 Sum_probs=43.8
Q ss_pred EEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe
Q 017982 186 VVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK 250 (363)
Q Consensus 186 VV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~ 250 (363)
+++|+|+||..... ...+...++|++|+ +.|++++|+||.+ ...++.+.+.+++.
T Consensus 2 i~~DlDGTLL~~~~-~~~~~~~~~l~~l~-~~gi~~~i~TgR~--------~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 2 VFSDLDGTLLDSHS-YDWQPAAPWLTRLQ-EAGIPVILCTSKT--------AAEVEYLQKALGLT 56 (221)
T ss_pred EEEeCCCCCcCCCC-CCcHHHHHHHHHHH-HCCCeEEEEcCCC--------HHHHHHHHHHcCCC
Confidence 68999999986433 34555899999998 6899999999996 35677888888865
No 150
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=96.55 E-value=0.0086 Score=54.12 Aligned_cols=58 Identities=19% Similarity=0.326 Sum_probs=45.0
Q ss_pred EEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEE
Q 017982 186 VVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVI 252 (363)
Q Consensus 186 VV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I 252 (363)
+++|+|+||+.+....+.+.+.++|++|+ +.|..++|+|..+ ...+..++..++..++
T Consensus 2 i~~D~DgTL~~~~~~~~~~~~~~~l~~l~-~~g~~~~i~TGR~--------~~~~~~~~~~~~~~~i 59 (204)
T TIGR01484 2 LFFDLDGTLLDPNAHELSPETIEALERLR-EAGVKVVLVTGRS--------LAEIKELLKQLPLPLI 59 (204)
T ss_pred EEEeCcCCCcCCCCCcCCHHHHHHHHHHH-HCCCEEEEECCCC--------HHHHHHHHHhCCCCEE
Confidence 68999999997543568899999999998 5789999999996 3556666665554443
No 151
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=96.48 E-value=0.0084 Score=57.23 Aligned_cols=60 Identities=17% Similarity=0.224 Sum_probs=49.0
Q ss_pred cCCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe
Q 017982 181 RGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK 250 (363)
Q Consensus 181 ~GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~ 250 (363)
..++.|++|+|+||... .....+...++|++|+ +.|+.++|+|..+ ...+..+.+.+|++
T Consensus 5 ~~~~lI~~DlDGTLL~~-~~~i~~~~~~ai~~l~-~~Gi~~viaTGR~--------~~~i~~~~~~l~~~ 64 (271)
T PRK03669 5 QDPLLIFTDLDGTLLDS-HTYDWQPAAPWLTRLR-EAQVPVILCSSKT--------AAEMLPLQQTLGLQ 64 (271)
T ss_pred CCCeEEEEeCccCCcCC-CCcCcHHHHHHHHHHH-HcCCeEEEEcCCC--------HHHHHHHHHHhCCC
Confidence 46789999999999864 4456788999999998 5899999999986 35677788888873
No 152
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=96.40 E-value=0.035 Score=49.09 Aligned_cols=102 Identities=18% Similarity=0.173 Sum_probs=72.9
Q ss_pred EcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEcccCCCchhH-HHH
Q 017982 188 FDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAGTA-EEI 266 (363)
Q Consensus 188 ~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~~~kKP~p~~-~~a 266 (363)
.+.+.|++ ..-.+++++.+.+++|++ . ..++|+|.-. ...+..+++-.|++.-.... --++.+ .++
T Consensus 19 ~~v~~tia--tgGklf~ev~e~iqeL~d-~-V~i~IASgDr--------~gsl~~lae~~gi~~~rv~a-~a~~e~K~~i 85 (152)
T COG4087 19 GKVLYTIA--TGGKLFSEVSETIQELHD-M-VDIYIASGDR--------KGSLVQLAEFVGIPVERVFA-GADPEMKAKI 85 (152)
T ss_pred ceEEEEEc--cCcEEcHhhHHHHHHHHH-h-heEEEecCCc--------chHHHHHHHHcCCceeeeec-ccCHHHHHHH
Confidence 35667776 345679999999999994 5 7899998764 24567788888998532111 112223 467
Q ss_pred HHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcC
Q 017982 267 EKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEP 303 (363)
Q Consensus 267 lk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p 303 (363)
+..++-+-+.++||||-. +|+.+-+++-+.-+-+.+
T Consensus 86 i~eLkk~~~k~vmVGnGa-ND~laLr~ADlGI~tiq~ 121 (152)
T COG4087 86 IRELKKRYEKVVMVGNGA-NDILALREADLGICTIQQ 121 (152)
T ss_pred HHHhcCCCcEEEEecCCc-chHHHhhhcccceEEecc
Confidence 777877779999999999 899999998765444443
No 153
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=96.39 E-value=0.0099 Score=58.77 Aligned_cols=58 Identities=10% Similarity=0.199 Sum_probs=48.3
Q ss_pred CCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe
Q 017982 183 FKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK 250 (363)
Q Consensus 183 IkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~ 250 (363)
.|.|++|+|+||.. .....++.+.++|++|+ +.|+.++++|... ...+..+.+.+++.
T Consensus 1 ~KLIftDLDGTLLd-~~~~~~~~a~~aL~~Lk-~~GI~vVlaTGRt--------~~ev~~l~~~Lgl~ 58 (302)
T PRK12702 1 MRLVLSSLDGSLLD-LEFNSYGAARQALAALE-RRSIPLVLYSLRT--------RAQLEHLCRQLRLE 58 (302)
T ss_pred CcEEEEeCCCCCcC-CCCcCCHHHHHHHHHHH-HCCCEEEEEcCCC--------HHHHHHHHHHhCCC
Confidence 47899999999986 45567888999999998 6899999999986 36677888888875
No 154
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=96.38 E-value=0.018 Score=63.07 Aligned_cols=108 Identities=20% Similarity=0.265 Sum_probs=81.8
Q ss_pred hHHHHHcCCCEEEEcCCceeecC--CCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEE
Q 017982 175 WAELQRRGFKGVVFDKDNTLTAP--YSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVI 252 (363)
Q Consensus 175 ~~~L~~~GIkaVV~DlDnTL~~~--~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I 252 (363)
.+.+.+.|-.++++-.|+.+... -...+.|+..+++++|+ +.|++++++|.-. ...++.+.+.+||+-+
T Consensus 509 ~~~~~~~G~t~v~va~dg~~~g~i~~~D~~R~~a~~aI~~L~-~~Gi~~~mLTGDn--------~~~A~~iA~~lGId~v 579 (713)
T COG2217 509 IEALESEGKTVVFVAVDGKLVGVIALADELRPDAKEAIAALK-ALGIKVVMLTGDN--------RRTAEAIAKELGIDEV 579 (713)
T ss_pred HHHHHhcCCeEEEEEECCEEEEEEEEeCCCChhHHHHHHHHH-HCCCeEEEEcCCC--------HHHHHHHHHHcChHhh
Confidence 46677889888999999976542 45678899999999999 6899999999764 4788999999999865
Q ss_pred EcccCCCchhHHHHHHHhCCCCCcEEEEccCCcccHHHHHHc
Q 017982 253 RHRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRN 294 (363)
Q Consensus 253 ~~~~kKP~p~~~~alk~lgl~pee~vmVGDrL~TDI~~A~ra 294 (363)
. +.-+|....+ +.+++.-.-+.++||||-+ +|-.+=..+
T Consensus 580 ~-AellPedK~~-~V~~l~~~g~~VamVGDGI-NDAPALA~A 618 (713)
T COG2217 580 R-AELLPEDKAE-IVRELQAEGRKVAMVGDGI-NDAPALAAA 618 (713)
T ss_pred e-ccCCcHHHHH-HHHHHHhcCCEEEEEeCCc-hhHHHHhhc
Confidence 3 3457776432 3444444447899999999 687664443
No 155
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=96.33 E-value=0.0091 Score=58.34 Aligned_cols=119 Identities=12% Similarity=0.061 Sum_probs=70.0
Q ss_pred CCCEEEEcCCceeec-------------------CC-------CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCc
Q 017982 182 GFKGVVFDKDNTLTA-------------------PY-------SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDN 235 (363)
Q Consensus 182 GIkaVV~DlDnTL~~-------------------~~-------~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp 235 (363)
|..++|||+|.|+.. |. .....|++.+++++++ ..|++|+++||.+..
T Consensus 100 ~~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l~-~~G~kIf~VSgR~e~----- 173 (275)
T TIGR01680 100 EKDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKLV-SLGFKIIFLSGRLKD----- 173 (275)
T ss_pred CCCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHHH-HCCCEEEEEeCCchh-----
Confidence 668999999999761 22 2245688999999998 689999999999731
Q ss_pred cHHHHHHHHHHhCCeE---EEcc-c----CCCchhHH-HHHHHhCCCCCc-EEEEccCCcccHHHHHHcCCeEEEEc-CC
Q 017982 236 DASKARKLEGKIGIKV---IRHR-V----KKPAGTAE-EIEKHFGCQSSQ-LIMVGDRPFTDIVYGNRNGFLTILTE-PL 304 (363)
Q Consensus 236 ~~~~a~~i~~~LGi~~---I~~~-~----kKP~p~~~-~alk~lgl~pee-~vmVGDrL~TDI~~A~raGi~TIlV~-p~ 304 (363)
.......-+...|.+. +... . ++....++ ...+++--+--+ +..|||++ .|..|+...+.+|.-+. |.
T Consensus 174 ~r~aT~~NL~kaGy~~~~~LiLR~~~D~~~~~av~yKs~~R~~li~eGYrIv~~iGDq~-sDl~G~~~g~~RtFKLPNP~ 252 (275)
T TIGR01680 174 KQAVTEANLKKAGYHTWEKLILKDPQDNSAENAVEYKTAARAKLIQEGYNIVGIIGDQW-NDLKGEHRGAIRSFKLPNPC 252 (275)
T ss_pred HHHHHHHHHHHcCCCCcceeeecCCCCCccchhHHHHHHHHHHHHHcCceEEEEECCCH-HhccCCCccCcceecCCCcc
Confidence 1222344455667752 2211 1 11111122 111221111123 46899999 79988774345776663 55
Q ss_pred CCC
Q 017982 305 SLA 307 (363)
Q Consensus 305 ~~~ 307 (363)
.+-
T Consensus 253 ~~~ 255 (275)
T TIGR01680 253 TTF 255 (275)
T ss_pred ccc
Confidence 433
No 156
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=96.29 E-value=0.0094 Score=53.92 Aligned_cols=55 Identities=16% Similarity=0.212 Sum_probs=45.3
Q ss_pred EEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe
Q 017982 186 VVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK 250 (363)
Q Consensus 186 VV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~ 250 (363)
|++|+|+||.. ....+.++..++|++|+ +.|+.++|+|... ...+..+...+++.
T Consensus 1 i~~DlDGTLl~-~~~~i~~~~~~al~~l~-~~g~~~~i~TGR~--------~~~~~~~~~~~~~~ 55 (254)
T PF08282_consen 1 IFSDLDGTLLN-SDGKISPETIEALKELQ-EKGIKLVIATGRS--------YSSIKRLLKELGID 55 (254)
T ss_dssp EEEECCTTTCS-TTSSSCHHHHHHHHHHH-HTTCEEEEECSST--------HHHHHHHHHHTTHC
T ss_pred cEEEECCceec-CCCeeCHHHHHHHHhhc-ccceEEEEEccCc--------ccccccccccccch
Confidence 68999999976 44458899999999998 5799999999886 35677888887764
No 157
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=96.28 E-value=0.026 Score=61.58 Aligned_cols=109 Identities=13% Similarity=0.176 Sum_probs=81.4
Q ss_pred HHHHHcCCCEEEEcCCceeec--CCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEE
Q 017982 176 AELQRRGFKGVVFDKDNTLTA--PYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIR 253 (363)
Q Consensus 176 ~~L~~~GIkaVV~DlDnTL~~--~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~ 253 (363)
+.+.+.|.+.+.+-.|+++.. .-...+.|++.+.+++|+ +.|+++.++|.-. ...++.+.+.+|++.++
T Consensus 418 ~~~a~~G~~~l~va~~~~~lG~i~l~D~~R~~~~eai~~Lr-~~GI~vvMiTGDn--------~~TA~aIA~elGId~v~ 488 (679)
T PRK01122 418 DEVARKGGTPLVVAEDNRVLGVIYLKDIVKPGIKERFAELR-KMGIKTVMITGDN--------PLTAAAIAAEAGVDDFL 488 (679)
T ss_pred HHHHhCCCcEEEEEECCeEEEEEEEeccCchhHHHHHHHHH-HCCCeEEEECCCC--------HHHHHHHHHHcCCcEEE
Confidence 456678999888877777653 244567899999999998 6899999999764 37789999999998664
Q ss_pred cccCCCchhHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCC
Q 017982 254 HRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGF 296 (363)
Q Consensus 254 ~~~kKP~p~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi 296 (363)
. .-.|...+ ++.+.+.-.-+-++|+||-. .|-.+=+++.+
T Consensus 489 A-~~~PedK~-~iV~~lQ~~G~~VaMtGDGv-NDAPALa~ADV 528 (679)
T PRK01122 489 A-EATPEDKL-ALIRQEQAEGRLVAMTGDGT-NDAPALAQADV 528 (679)
T ss_pred c-cCCHHHHH-HHHHHHHHcCCeEEEECCCc-chHHHHHhCCE
Confidence 3 34776533 23334433345699999999 79988887764
No 158
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=96.24 E-value=0.011 Score=55.54 Aligned_cols=55 Identities=13% Similarity=0.238 Sum_probs=45.1
Q ss_pred EEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe
Q 017982 186 VVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK 250 (363)
Q Consensus 186 VV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~ 250 (363)
+++|+|+||.. ....+.++..++|++|+ +.|+.++|+|+.. ...+..+.+.+++.
T Consensus 2 i~~DlDGTLl~-~~~~i~~~~~~~i~~l~-~~G~~~~iaTGR~--------~~~~~~~~~~~~~~ 56 (256)
T TIGR00099 2 IFIDLDGTLLN-DDHTISPSTKEALAKLR-EKGIKVVLATGRP--------YKEVKNILKELGLD 56 (256)
T ss_pred EEEeCCCCCCC-CCCccCHHHHHHHHHHH-HCCCeEEEEeCCC--------HHHHHHHHHHcCCC
Confidence 68999999986 34467889999999998 5799999999996 35667777777765
No 159
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=96.20 E-value=0.016 Score=54.42 Aligned_cols=54 Identities=22% Similarity=0.271 Sum_probs=43.4
Q ss_pred EEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCC
Q 017982 185 GVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGI 249 (363)
Q Consensus 185 aVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi 249 (363)
.+++|+|+||.. . ....+++.++|++|+ +.|++++++|+.. ...+..+.+.+|+
T Consensus 1 li~~DlDGTLl~-~-~~~~~~~~~ai~~l~-~~G~~~vi~TgR~--------~~~~~~~~~~lg~ 54 (225)
T TIGR02461 1 VIFTDLDGTLLP-P-GYEPGPAREALEELK-DLGFPIVFVSSKT--------RAEQEYYREELGV 54 (225)
T ss_pred CEEEeCCCCCcC-C-CCCchHHHHHHHHHH-HCCCEEEEEeCCC--------HHHHHHHHHHcCC
Confidence 378999999975 2 345678999999998 5799999999886 3556778888886
No 160
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=96.18 E-value=0.031 Score=60.96 Aligned_cols=109 Identities=13% Similarity=0.168 Sum_probs=79.6
Q ss_pred HHHHHcCCCEEEEcCCceeec--CCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEE
Q 017982 176 AELQRRGFKGVVFDKDNTLTA--PYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIR 253 (363)
Q Consensus 176 ~~L~~~GIkaVV~DlDnTL~~--~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~ 253 (363)
+.+.+.|.+.+.+-.|+++.. .-...+.|++.+.+++|+ +.|+++.++|.-. ...++.+.+.+|++.++
T Consensus 414 ~~~a~~G~~~l~v~~~~~~lG~i~l~Dp~R~~a~e~I~~Lr-~~GI~vvMiTGDn--------~~TA~aIA~elGI~~v~ 484 (673)
T PRK14010 414 KGVSKKGGTPLVVLEDNEILGVIYLKDVIKDGLVERFRELR-EMGIETVMCTGDN--------ELTAATIAKEAGVDRFV 484 (673)
T ss_pred HHHHhCCCeEEEEEECCEEEEEEEeecCCcHHHHHHHHHHH-HCCCeEEEECCCC--------HHHHHHHHHHcCCceEE
Confidence 345677888776545666543 245567899999999998 6899999999764 37789999999998654
Q ss_pred cccCCCchhHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCC
Q 017982 254 HRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGF 296 (363)
Q Consensus 254 ~~~kKP~p~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi 296 (363)
.. -+|.-.+ ++.+.+.-.-+-++|+||-. .|-.+=+++.+
T Consensus 485 A~-~~PedK~-~iV~~lQ~~G~~VaMtGDGv-NDAPALa~ADV 524 (673)
T PRK14010 485 AE-CKPEDKI-NVIREEQAKGHIVAMTGDGT-NDAPALAEANV 524 (673)
T ss_pred cC-CCHHHHH-HHHHHHHhCCCEEEEECCCh-hhHHHHHhCCE
Confidence 43 4777543 23344443345789999999 79988888765
No 161
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=96.15 E-value=0.015 Score=54.70 Aligned_cols=86 Identities=15% Similarity=0.155 Sum_probs=53.3
Q ss_pred hHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEE----------EcccCCCchhHHHHHHHhCCCC
Q 017982 205 PLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVI----------RHRVKKPAGTAEEIEKHFGCQS 274 (363)
Q Consensus 205 ~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I----------~~~~kKP~p~~~~alk~lgl~p 274 (363)
++.+.+..++ ..+..+.|+++.... .......+.+.+.+++... ..+..|+. ++..+++.+|+++
T Consensus 141 ~~~~~~~~~~-~~~~~~~i~~~~~~~---~~~~~~~~~~~~~~~~~~~~s~~~~~ei~~~~~~K~~-~l~~l~~~~gi~~ 215 (272)
T PRK10530 141 QVDSLAQAAR-QVNAIWKFALTHEDL---PQLQHFAKHVEHELGLECEWSWHDQVDIARKGNSKGK-RLTQWVEAQGWSM 215 (272)
T ss_pred EcccHHHHHh-hcCCcEEEEEecCCH---HHHHHHHHHHhhhcCceEEEecCceEEEecCCCChHH-HHHHHHHHcCCCH
Confidence 3444444444 345456667765310 0001233445555565421 12334443 4688999999999
Q ss_pred CcEEEEccCCcccHHHHHHcCC
Q 017982 275 SQLIMVGDRPFTDIVYGNRNGF 296 (363)
Q Consensus 275 ee~vmVGDrL~TDI~~A~raGi 296 (363)
+++++|||+. .|+.+++.+|+
T Consensus 216 ~e~i~~GD~~-NDi~m~~~ag~ 236 (272)
T PRK10530 216 KNVVAFGDNF-NDISMLEAAGL 236 (272)
T ss_pred HHeEEeCCCh-hhHHHHHhcCc
Confidence 9999999998 89999999997
No 162
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=96.14 E-value=0.008 Score=52.57 Aligned_cols=123 Identities=17% Similarity=0.132 Sum_probs=65.8
Q ss_pred CEEEEcCCceeecCCCC------------------CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHH
Q 017982 184 KGVVFDKDNTLTAPYSL------------------TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEG 245 (363)
Q Consensus 184 kaVV~DlDnTL~~~~~~------------------~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~ 245 (363)
+.+|+|+|+||...... ..-|++.++|+.|.+ .+.++|.|.+. ...++.+.+
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~~FL~~l~~--~~ev~i~T~~~--------~~ya~~v~~ 70 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLPYDFKIIDQRGGYYVKLRPGLDEFLEELSK--HYEVVIWTSAS--------EEYAEPVLD 70 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT-SEEEETEEEEEEEEE-TTHHHHHHHHHH--HCEEEEE-SS---------HHHHHHHHH
T ss_pred CEEEEeCCCcEEEEeecCCCCcccceeccccceeEeeCchHHHHHHHHHH--hceEEEEEeeh--------hhhhhHHHH
Confidence 47899999999752211 256999999999974 47999999996 467788888
Q ss_pred HhCC-----eEEEc--ccCCCchhHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCCCC--CchhHHHHH
Q 017982 246 KIGI-----KVIRH--RVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSLA--EEPFIVRQV 316 (363)
Q Consensus 246 ~LGi-----~~I~~--~~kKP~p~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~~~--~e~~~t~~~ 316 (363)
.++- ..+.. .+..-...+.+-++.+|-+.+++|+|.|+.. ..... .-..|.|.+.... .+....++.
T Consensus 71 ~ldp~~~~~~~~~~r~~~~~~~~~~~KdL~~l~~~~~~vvivDD~~~--~~~~~--~~N~i~v~~f~~~~~~D~~L~~l~ 146 (159)
T PF03031_consen 71 ALDPNGKLFSRRLYRDDCTFDKGSYIKDLSKLGRDLDNVVIVDDSPR--KWALQ--PDNGIPVPPFFGDTPNDRELLRLL 146 (159)
T ss_dssp HHTTTTSSEEEEEEGGGSEEETTEEE--GGGSSS-GGGEEEEES-GG--GGTTS--GGGEEE----SSCHTT--HHHHHH
T ss_pred hhhhhccccccccccccccccccccccchHHHhhccccEEEEeCCHH--Heecc--CCceEEeccccCCCcchhHHHHHH
Confidence 8763 12211 1110000112445566778899999999873 32222 2235777765543 233333444
Q ss_pred HHHH
Q 017982 317 RKLE 320 (363)
Q Consensus 317 R~lE 320 (363)
..||
T Consensus 147 ~~L~ 150 (159)
T PF03031_consen 147 PFLE 150 (159)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4443
No 163
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=96.00 E-value=0.045 Score=54.13 Aligned_cols=114 Identities=16% Similarity=0.206 Sum_probs=67.8
Q ss_pred cCCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEE-cccCCC
Q 017982 181 RGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIR-HRVKKP 259 (363)
Q Consensus 181 ~GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~-~~~kKP 259 (363)
.++..++||-|++| |......|++.++++.|+ ..|..+.++||++... ....++++ +.+|+.-+- ...--|
T Consensus 20 ~~~DtfifDcDGVl--W~g~~~ipGs~e~l~~L~-~~gK~i~fvTNNStks----r~~y~kK~-~~lG~~~v~e~~i~ss 91 (306)
T KOG2882|consen 20 DSFDTFIFDCDGVL--WLGEKPIPGSPEALNLLK-SLGKQIIFVTNNSTKS----REQYMKKF-AKLGFNSVKEENIFSS 91 (306)
T ss_pred hhcCEEEEcCCcce--eecCCCCCChHHHHHHHH-HcCCcEEEEeCCCcch----HHHHHHHH-HHhCccccCcccccCh
Confidence 58999999999999 567788999999999998 6898999999997421 01222232 345654220 111112
Q ss_pred chhHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCC
Q 017982 260 AGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPL 304 (363)
Q Consensus 260 ~p~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~ 304 (363)
.-..-..+++.....+.+.++|-.-..+- ..++|+..+...+.
T Consensus 92 a~~~a~ylk~~~~~~k~Vyvig~~gi~~e--L~~aG~~~~g~~~~ 134 (306)
T KOG2882|consen 92 AYAIADYLKKRKPFGKKVYVIGEEGIREE--LDEAGFEYFGGGPD 134 (306)
T ss_pred HHHHHHHHHHhCcCCCeEEEecchhhhHH--HHHcCceeecCCCC
Confidence 21122223333334566777776544322 35567554444433
No 164
>PLN02887 hydrolase family protein
Probab=95.83 E-value=0.024 Score=60.76 Aligned_cols=62 Identities=11% Similarity=0.155 Sum_probs=49.9
Q ss_pred HHHcCCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCC
Q 017982 178 LQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGI 249 (363)
Q Consensus 178 L~~~GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi 249 (363)
.+...+|.|++|+|+||.. ....+.+...++|++++ +.|+.++|+|... ...+..+.+.+++
T Consensus 303 ~~~~~iKLIa~DLDGTLLn-~d~~Is~~t~eAI~kl~-ekGi~~vIATGR~--------~~~i~~~l~~L~l 364 (580)
T PLN02887 303 FYKPKFSYIFCDMDGTLLN-SKSQISETNAKALKEAL-SRGVKVVIATGKA--------RPAVIDILKMVDL 364 (580)
T ss_pred hhccCccEEEEeCCCCCCC-CCCccCHHHHHHHHHHH-HCCCeEEEEcCCC--------HHHHHHHHHHhCc
Confidence 3467799999999999985 34568899999999998 6899999999886 3456666676664
No 165
>PTZ00174 phosphomannomutase; Provisional
Probab=95.78 E-value=0.015 Score=54.96 Aligned_cols=46 Identities=24% Similarity=0.239 Sum_probs=39.7
Q ss_pred cCCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCC
Q 017982 181 RGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSA 228 (363)
Q Consensus 181 ~GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~ 228 (363)
..+|.+++|+|+||.. ....+.|...++|++++ +.|+.++|+|..+
T Consensus 3 ~~~klia~DlDGTLL~-~~~~is~~~~~ai~~l~-~~Gi~~viaTGR~ 48 (247)
T PTZ00174 3 MKKTILLFDVDGTLTK-PRNPITQEMKDTLAKLK-SKGFKIGVVGGSD 48 (247)
T ss_pred CCCeEEEEECcCCCcC-CCCCCCHHHHHHHHHHH-HCCCEEEEEcCCC
Confidence 4689999999999985 44567889999999998 5799999999885
No 166
>PRK11590 hypothetical protein; Provisional
Probab=95.65 E-value=0.13 Score=47.34 Aligned_cols=94 Identities=10% Similarity=-0.043 Sum_probs=65.8
Q ss_pred CcchhHHHHH-HHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCC---e-EEE-----cccCC---Cch-h---H
Q 017982 201 TLWGPLSSSI-EQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGI---K-VIR-----HRVKK---PAG-T---A 263 (363)
Q Consensus 201 ~~~p~v~e~L-~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi---~-~I~-----~~~kK---P~p-~---~ 263 (363)
.++|++.+.| +.++ +.|++++|+||+. ...++.+++.+|+ + +|. ...+| |.. + .
T Consensus 95 ~~~pga~e~L~~~l~-~~G~~l~IvSas~--------~~~~~~il~~l~~~~~~~~i~t~l~~~~tg~~~g~~c~g~~K~ 165 (211)
T PRK11590 95 TAFPVVQERLTTYLL-SSDADVWLITGSP--------QPLVEQVYFDTPWLPRVNLIASQMQRRYGGWVLTLRCLGHEKV 165 (211)
T ss_pred cCCccHHHHHHHHHH-hCCCEEEEEeCCc--------HHHHHHHHHHccccccCceEEEEEEEEEccEECCccCCChHHH
Confidence 4589999999 4566 5799999999996 3667788888773 3 332 00112 222 1 2
Q ss_pred HHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982 264 EEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS 305 (363)
Q Consensus 264 ~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~ 305 (363)
..+.+.++.+...+..-||+. .|+..-..+| ..++|+|..
T Consensus 166 ~~l~~~~~~~~~~~~aY~Ds~-~D~pmL~~a~-~~~~vnp~~ 205 (211)
T PRK11590 166 AQLERKIGTPLRLYSGYSDSK-QDNPLLYFCQ-HRWRVTPRG 205 (211)
T ss_pred HHHHHHhCCCcceEEEecCCc-ccHHHHHhCC-CCEEECccH
Confidence 344445677777888999999 7999988888 567887754
No 167
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=95.50 E-value=0.066 Score=51.73 Aligned_cols=97 Identities=20% Similarity=0.130 Sum_probs=60.5
Q ss_pred CCEEEEcCCceeec-------------------CC------CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccH
Q 017982 183 FKGVVFDKDNTLTA-------------------PY------SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDA 237 (363)
Q Consensus 183 IkaVV~DlDnTL~~-------------------~~------~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~ 237 (363)
-++|++|+|.|+.. |+ .....||+.+++++.- ..|..|+.+||.+.....+
T Consensus 79 ~~aVvlDlDETvLdNs~Yqgy~v~nnk~f~pe~Wd~wV~a~~sk~vpGA~eFl~Yvn-~~Gg~ifyiSNR~~~~~~~--- 154 (274)
T COG2503 79 KKAVVLDLDETVLDNSAYQGYQVLNNKGFTPETWDKWVQAKKSKAVPGAVEFLNYVN-SNGGKIFYISNRDQENEKD--- 154 (274)
T ss_pred CceEEEecchHhhcCccccchhhhcCCCCCccchHHHHhhcccccCccHHHHHHHHH-hcCcEEEEEeccchhcccc---
Confidence 34899999999752 11 1246799999999987 5788999999997422111
Q ss_pred HHHHHHHHHhCCeE------EEcccCCCchhHHHHHHHhCCCCCcEEEEccCCcccH
Q 017982 238 SKARKLEGKIGIKV------IRHRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDI 288 (363)
Q Consensus 238 ~~a~~i~~~LGi~~------I~~~~kKP~p~~~~alk~lgl~pee~vmVGDrL~TDI 288 (363)
-...=+..+|++. ++...+|+...-.+++++ .-.=++.|||.+ .|.
T Consensus 155 -~T~~nLk~~g~~~~~~~~~llkk~~k~Ke~R~~~v~k---~~~iVm~vGDNl-~DF 206 (274)
T COG2503 155 -GTIENLKSEGLPQVLESHLLLKKDKKSKEVRRQAVEK---DYKIVMLVGDNL-DDF 206 (274)
T ss_pred -hhHHHHHHcCcccccccceEEeeCCCcHHHHHHHHhh---ccceeeEecCch-hhh
Confidence 1223345667763 333344554422233333 344577899998 354
No 168
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=95.49 E-value=0.045 Score=61.49 Aligned_cols=87 Identities=17% Similarity=0.217 Sum_probs=64.2
Q ss_pred CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeE---------------------------
Q 017982 199 SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV--------------------------- 251 (363)
Q Consensus 199 ~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~--------------------------- 251 (363)
...+.|++.+++++|+ +.|+++.++|... ...+..+.+.+|+..
T Consensus 535 ~Dplr~~v~e~I~~l~-~aGI~v~miTGD~--------~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~ 605 (917)
T TIGR01116 535 LDPPRPEVADAIEKCR-TAGIRVIMITGDN--------KETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAAC 605 (917)
T ss_pred eCCCchhHHHHHHHHH-HCCCEEEEecCCC--------HHHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhh
Confidence 3457899999999998 6899999999764 356778888887731
Q ss_pred ----EEcccCCCchhHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCe
Q 017982 252 ----IRHRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFL 297 (363)
Q Consensus 252 ----I~~~~kKP~p~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~ 297 (363)
++ +...|... .++++.++-..+.++||||.. .|+.+.+.|++.
T Consensus 606 ~~~~v~-ar~~P~~K-~~iV~~lq~~g~~va~iGDG~-ND~~alk~AdVG 652 (917)
T TIGR01116 606 RSAVLF-SRVEPSHK-SELVELLQEQGEIVAMTGDGV-NDAPALKKADIG 652 (917)
T ss_pred hcCeEE-EecCHHHH-HHHHHHHHhcCCeEEEecCCc-chHHHHHhCCee
Confidence 11 11233322 345566666678899999999 799999999983
No 169
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=95.47 E-value=0.057 Score=51.67 Aligned_cols=95 Identities=16% Similarity=0.186 Sum_probs=64.5
Q ss_pred CCCcchhHHHHHHHHHH-hCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeE----EE-------------------c
Q 017982 199 SLTLWGPLSSSIEQCKS-VFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV----IR-------------------H 254 (363)
Q Consensus 199 ~~~~~p~v~e~L~~Lk~-~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~----I~-------------------~ 254 (363)
...+.|++.++++.+.+ ..|+.++|+|++. .-.++.+++..|+.. |+ |
T Consensus 69 ~ip~~pgm~~~l~~l~~~~~~~~~~IiSDaN--------s~fI~~iL~~~gl~~~f~~I~TNpa~~~~~G~l~v~pyh~h 140 (234)
T PF06888_consen 69 SIPIDPGMKELLRFLAKNQRGFDLIIISDAN--------SFFIETILEHHGLRDCFSEIFTNPACFDADGRLRVRPYHSH 140 (234)
T ss_pred cCCCCccHHHHHHHHHhcCCCceEEEEeCCc--------HhHHHHHHHhCCCccccceEEeCCceecCCceEEEeCccCC
Confidence 44567889999999942 4689999999886 256788888888751 11 2
Q ss_pred ccCC--Cch----hHHHHHHH---hCCCCCcEEEEccCCcccHHHHHHcCCe-EEEEc
Q 017982 255 RVKK--PAG----TAEEIEKH---FGCQSSQLIMVGDRPFTDIVYGNRNGFL-TILTE 302 (363)
Q Consensus 255 ~~kK--P~p----~~~~alk~---lgl~pee~vmVGDrL~TDI~~A~raGi~-TIlV~ 302 (363)
.+.+ |+- .+++.++. -|+.-+++++|||.. +|+-.+.+++-. .++.+
T Consensus 141 ~C~~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~-nD~Cp~~~L~~~D~v~~R 197 (234)
T PF06888_consen 141 GCSLCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGR-NDFCPALRLRPRDVVFPR 197 (234)
T ss_pred CCCcCCCccchHHHHHHHHHHHhhcCCCcceEEEECCCC-CCcCcccccCCCCEEecC
Confidence 3322 221 23444444 267789999999998 899999886653 34443
No 170
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=95.40 E-value=0.096 Score=58.31 Aligned_cols=103 Identities=19% Similarity=0.245 Sum_probs=78.9
Q ss_pred HHHHHcCCCEEEEcCCceeecC--CCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEE
Q 017982 176 AELQRRGFKGVVFDKDNTLTAP--YSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIR 253 (363)
Q Consensus 176 ~~L~~~GIkaVV~DlDnTL~~~--~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~ 253 (363)
++....|..++.+-.|++++.. -.+.+.|++..++..|+ +.|++++++|.-. ..-++.+++.+|++-++
T Consensus 696 ~~~e~~g~tvv~v~vn~~l~gv~~l~D~vr~~a~~av~~Lk-~~Gi~v~mLTGDn--------~~aA~svA~~VGi~~V~ 766 (951)
T KOG0207|consen 696 TESERKGQTVVYVAVNGQLVGVFALEDQVRPDAALAVAELK-SMGIKVVMLTGDN--------DAAARSVAQQVGIDNVY 766 (951)
T ss_pred hhHhhcCceEEEEEECCEEEEEEEeccccchhHHHHHHHHH-hcCceEEEEcCCC--------HHHHHHHHHhhCcceEE
Confidence 3445678899999999999764 34568899999999999 6899999999775 36788999999998775
Q ss_pred cccCCCchhHHHHHHHhCCCCCcEEEEccCCcccHHH
Q 017982 254 HRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVY 290 (363)
Q Consensus 254 ~~~kKP~p~~~~alk~lgl~pee~vmVGDrL~TDI~~ 290 (363)
+.-+|.... +..+.+.-....++||||-+ .|--+
T Consensus 767 -aev~P~~K~-~~Ik~lq~~~~~VaMVGDGI-NDaPA 800 (951)
T KOG0207|consen 767 -AEVLPEQKA-EKIKEIQKNGGPVAMVGDGI-NDAPA 800 (951)
T ss_pred -eccCchhhH-HHHHHHHhcCCcEEEEeCCC-CccHH
Confidence 345787633 23455555557899999999 67544
No 171
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=95.28 E-value=0.12 Score=57.76 Aligned_cols=87 Identities=13% Similarity=0.053 Sum_probs=63.4
Q ss_pred CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe-------------------------EEE
Q 017982 199 SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK-------------------------VIR 253 (363)
Q Consensus 199 ~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~-------------------------~I~ 253 (363)
...+.|++.+++++|+ +.|+++.++|.-. ...+..+.+.+|+. .++
T Consensus 513 ~Dp~R~~~~~aI~~l~-~aGI~vvmiTGD~--------~~tA~aIA~~lGI~~~~v~~g~~l~~~~~~el~~~~~~~~vf 583 (867)
T TIGR01524 513 LDPPKESTKEAIAALF-KNGINVKVLTGDN--------EIVTARICQEVGIDANDFLLGADIEELSDEELARELRKYHIF 583 (867)
T ss_pred eCCCchhHHHHHHHHH-HCCCEEEEEcCCC--------HHHHHHHHHHcCCCCCCeeecHhhhhCCHHHHHHHhhhCeEE
Confidence 4467899999999998 6899999999764 36788999999986 232
Q ss_pred cccCCCchhHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCe
Q 017982 254 HRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFL 297 (363)
Q Consensus 254 ~~~kKP~p~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~ 297 (363)
. .-.|.... ++.+.+.-.-+.++|+||.. .|..+=+.|.+.
T Consensus 584 A-r~~Pe~K~-~iV~~lq~~G~vVam~GDGv-NDapALk~AdVG 624 (867)
T TIGR01524 584 A-RLTPMQKS-RIIGLLKKAGHTVGFLGDGI-NDAPALRKADVG 624 (867)
T ss_pred E-ECCHHHHH-HHHHHHHhCCCEEEEECCCc-ccHHHHHhCCEE
Confidence 2 23666432 23333333345799999999 799998888764
No 172
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=95.17 E-value=0.055 Score=51.02 Aligned_cols=55 Identities=24% Similarity=0.470 Sum_probs=43.0
Q ss_pred EEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe
Q 017982 186 VVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK 250 (363)
Q Consensus 186 VV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~ 250 (363)
+++|+|+||...... ..+...+++++|+ +.|++++|+|..+ ...+..+++.+|++
T Consensus 2 i~~DlDGTll~~~~~-~~~~~~~~i~~l~-~~g~~~~~~TgR~--------~~~~~~~~~~~~~~ 56 (256)
T TIGR01486 2 IFTDLDGTLLDPHGY-DWGPAKEVLERLQ-ELGIPVIPCTSKT--------AAEVEYLRKELGLE 56 (256)
T ss_pred EEEcCCCCCcCCCCc-CchHHHHHHHHHH-HCCCeEEEEcCCC--------HHHHHHHHHHcCCC
Confidence 689999999864432 3456899999998 5799999999885 35677788888874
No 173
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=95.09 E-value=0.15 Score=56.27 Aligned_cols=110 Identities=15% Similarity=0.199 Sum_probs=76.5
Q ss_pred HHHHHcCCCEEEEcC---Cc--eeec--CCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhC
Q 017982 176 AELQRRGFKGVVFDK---DN--TLTA--PYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIG 248 (363)
Q Consensus 176 ~~L~~~GIkaVV~Dl---Dn--TL~~--~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LG 248 (363)
+.+.+.|.+++.+-. ++ ++.. .-...+.|++.+++++|+ +.|+++.++|.-. ...++.+.+.+|
T Consensus 410 ~~~~~~G~rvl~vA~~~~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~-~aGI~v~miTGD~--------~~tA~~IA~~lG 480 (755)
T TIGR01647 410 DELASRGYRALGVARTDEEGRWHFLGLLPLFDPPRHDTKETIERAR-HLGVEVKMVTGDH--------LAIAKETARRLG 480 (755)
T ss_pred HHHHhCCCEEEEEEEEcCCCCcEEEEEeeccCCChhhHHHHHHHHH-HCCCeEEEECCCC--------HHHHHHHHHHcC
Confidence 456678988877643 22 4432 245578899999999999 6899999999775 367889999999
Q ss_pred CeE------------------------------EEcccCCCchhHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCe
Q 017982 249 IKV------------------------------IRHRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFL 297 (363)
Q Consensus 249 i~~------------------------------I~~~~kKP~p~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~ 297 (363)
+.. ++. .-.|.... .+.+.+.-.-+-+.|+||.. .|..+=+.|.+-
T Consensus 481 I~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfA-r~~Pe~K~-~iV~~lq~~G~~VamvGDGv-NDapAL~~AdVG 556 (755)
T TIGR01647 481 LGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFA-EVFPEHKY-EIVEILQKRGHLVGMTGDGV-NDAPALKKADVG 556 (755)
T ss_pred CCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEE-ecCHHHHH-HHHHHHHhcCCEEEEEcCCc-ccHHHHHhCCee
Confidence 852 222 23555422 23334433446799999999 799888877654
No 174
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=94.84 E-value=0.14 Score=51.26 Aligned_cols=102 Identities=18% Similarity=0.288 Sum_probs=69.7
Q ss_pred EEEEcCCceeecCCCCCcchhHHHHHHHHHHhCC---CeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEE---cccCC
Q 017982 185 GVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFG---HDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIR---HRVKK 258 (363)
Q Consensus 185 aVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~G---ikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~---~~~kK 258 (363)
+++||+|++|. ......+++.++|+.|.+..| ++.+.+||..+.. -..+++.+.+.||+.+-. ....-
T Consensus 37 gfafDIDGVL~--RG~~~i~~~~~Alr~L~~~~g~lkIP~vfLTNGGg~~----E~~rA~~lS~~Lgv~Vs~dqviqSHs 110 (389)
T KOG1618|consen 37 GFAFDIDGVLF--RGHRPIPGALKALRRLVDNQGQLKIPFVFLTNGGGIL----ESSRAQELSALLGVEVSADQVIQSHS 110 (389)
T ss_pred eEEEecccEEE--ecCCCCcchHHHHHHHHhcCCCeeccEEEEeCCCCcc----hhhHHHHHHHhhCCccCHHHHHhhcC
Confidence 57899999997 455567899999999975444 6899999998643 246888999999987421 01112
Q ss_pred CchhHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEE
Q 017982 259 PAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTIL 300 (363)
Q Consensus 259 P~p~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIl 300 (363)
| |+... ...-++++++|+.- =..-|...|++.|-
T Consensus 111 P---~r~l~---~~~~k~vLv~G~~~--vr~vAegyGFk~Vv 144 (389)
T KOG1618|consen 111 P---FRLLV---EYHYKRVLVVGQGS--VREVAEGYGFKNVV 144 (389)
T ss_pred h---HHHHh---hhhhceEEEecCCc--HHHHhhccCcccee
Confidence 2 22222 24567899999765 35567777887543
No 175
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=94.73 E-value=0.28 Score=45.73 Aligned_cols=83 Identities=18% Similarity=0.128 Sum_probs=53.6
Q ss_pred HHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe----EEEcccCCCch-hH--HHHHHHhCCCCCcEEEEcc
Q 017982 210 IEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK----VIRHRVKKPAG-TA--EEIEKHFGCQSSQLIMVGD 282 (363)
Q Consensus 210 L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~----~I~~~~kKP~p-~~--~~alk~lgl~pee~vmVGD 282 (363)
|-.+.++.|-.++.+|..... ........+++.+.+. +++. ..||.+ .+ -..++.-+ --++-||
T Consensus 122 LI~MHq~RGD~i~FvTGRt~g----k~d~vsk~Lak~F~i~~m~pv~f~-Gdk~k~~qy~Kt~~i~~~~----~~IhYGD 192 (237)
T COG3700 122 LIDMHQRRGDAIYFVTGRTPG----KTDTVSKTLAKNFHITNMNPVIFA-GDKPKPGQYTKTQWIQDKN----IRIHYGD 192 (237)
T ss_pred HHHHHHhcCCeEEEEecCCCC----cccccchhHHhhcccCCCcceeec-cCCCCcccccccHHHHhcC----ceEEecC
Confidence 334555779999999987631 1122344566667664 4543 346654 23 23444434 3578999
Q ss_pred CCcccHHHHHHcCCeEEEEc
Q 017982 283 RPFTDIVYGNRNGFLTILTE 302 (363)
Q Consensus 283 rL~TDI~~A~raGi~TIlV~ 302 (363)
+- .||.+|+.+|++.|-+.
T Consensus 193 SD-~Di~AAkeaG~RgIRil 211 (237)
T COG3700 193 SD-NDITAAKEAGARGIRIL 211 (237)
T ss_pred Cc-hhhhHHHhcCccceeEE
Confidence 97 79999999999988776
No 176
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=94.68 E-value=0.18 Score=56.85 Aligned_cols=109 Identities=15% Similarity=0.169 Sum_probs=73.4
Q ss_pred HHHHHcCCCEEEEcC----------------CceeecC--CCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccH
Q 017982 176 AELQRRGFKGVVFDK----------------DNTLTAP--YSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDA 237 (363)
Q Consensus 176 ~~L~~~GIkaVV~Dl----------------DnTL~~~--~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~ 237 (363)
+.+.+.|.+++.+-. |.++... -...+.|++.+++++|+ +.|+++.++|.-. .
T Consensus 507 ~~~a~~G~rvlavA~k~~~~~~~~~~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~-~aGI~v~miTGD~--------~ 577 (902)
T PRK10517 507 DTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDPPKETTAPALKALK-ASGVTVKILTGDS--------E 577 (902)
T ss_pred HHHHhcCCEEEEEEEecCCccccccccccccCceeeehHhhhCcchhhHHHHHHHHH-HCCCEEEEEcCCC--------H
Confidence 345577888766531 2233321 23457899999999998 6899999999764 3
Q ss_pred HHHHHHHHHhCCe-------------------------EEEcccCCCchhHHHHHHHhCCCCCcEEEEccCCcccHHHHH
Q 017982 238 SKARKLEGKIGIK-------------------------VIRHRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGN 292 (363)
Q Consensus 238 ~~a~~i~~~LGi~-------------------------~I~~~~kKP~p~~~~alk~lgl~pee~vmVGDrL~TDI~~A~ 292 (363)
..+..+.+.+|+. .++. .-.|.... ++.+.+.-.-+-+.|+||.. .|..+=+
T Consensus 578 ~tA~~IA~~lGI~~~~v~~G~el~~l~~~el~~~~~~~~VfA-r~sPe~K~-~IV~~Lq~~G~vVam~GDGv-NDaPALk 654 (902)
T PRK10517 578 LVAAKVCHEVGLDAGEVLIGSDIETLSDDELANLAERTTLFA-RLTPMHKE-RIVTLLKREGHVVGFMGDGI-NDAPALR 654 (902)
T ss_pred HHHHHHHHHcCCCccCceeHHHHHhCCHHHHHHHHhhCcEEE-EcCHHHHH-HHHHHHHHCCCEEEEECCCc-chHHHHH
Confidence 6788899999985 2332 23555432 23333333346799999999 7999888
Q ss_pred HcCC
Q 017982 293 RNGF 296 (363)
Q Consensus 293 raGi 296 (363)
.|.+
T Consensus 655 ~ADV 658 (902)
T PRK10517 655 AADI 658 (902)
T ss_pred hCCE
Confidence 7764
No 177
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=94.32 E-value=0.35 Score=54.58 Aligned_cols=86 Identities=12% Similarity=0.155 Sum_probs=61.9
Q ss_pred CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe---------------------------E
Q 017982 199 SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK---------------------------V 251 (363)
Q Consensus 199 ~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~---------------------------~ 251 (363)
...+.|++.+++++|+ +.|+++.++|.-. ...+..+.+.+|+. .
T Consensus 577 ~Dplr~~~~~aI~~l~-~aGI~v~miTGD~--------~~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~ 647 (941)
T TIGR01517 577 KDPLRPGVREAVQECQ-RAGITVRMVTGDN--------IDTAKAIARNCGILTFGGLAMEGKEFRRLVYEEMDPILPKLR 647 (941)
T ss_pred cCCCchhHHHHHHHHH-HCCCEEEEECCCC--------hHHHHHHHHHcCCCCCCceEeeHHHhhhCCHHHHHHHhccCe
Confidence 4467899999999998 6899999999775 36788899999984 2
Q ss_pred EEcccCCCchhHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCC
Q 017982 252 IRHRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGF 296 (363)
Q Consensus 252 I~~~~kKP~p~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi 296 (363)
++. .-.|.... ++.+.+.-.-+-++|+||.. .|..+=++|-+
T Consensus 648 Vfa-r~sPe~K~-~iV~~lq~~g~vVam~GDGv-NDapALk~AdV 689 (941)
T TIGR01517 648 VLA-RSSPLDKQ-LLVLMLKDMGEVVAVTGDGT-NDAPALKLADV 689 (941)
T ss_pred EEE-ECCHHHHH-HHHHHHHHCCCEEEEECCCC-chHHHHHhCCc
Confidence 333 33666532 23333333345799999999 79998777754
No 178
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=94.31 E-value=0.24 Score=55.74 Aligned_cols=87 Identities=11% Similarity=0.114 Sum_probs=63.2
Q ss_pred CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe-------------------------EEE
Q 017982 199 SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK-------------------------VIR 253 (363)
Q Consensus 199 ~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~-------------------------~I~ 253 (363)
...+.|++.+++++|+ +.|+++.++|.-. ...+..+.+.+|+. .++
T Consensus 548 ~Dp~R~~a~~aI~~l~-~aGI~v~miTGD~--------~~tA~aIA~~lGI~~~~vi~G~el~~~~~~el~~~v~~~~Vf 618 (903)
T PRK15122 548 LDPPKESAAPAIAALR-ENGVAVKVLTGDN--------PIVTAKICREVGLEPGEPLLGTEIEAMDDAALAREVEERTVF 618 (903)
T ss_pred cCccHHHHHHHHHHHH-HCCCeEEEECCCC--------HHHHHHHHHHcCCCCCCccchHhhhhCCHHHHHHHhhhCCEE
Confidence 4567899999999998 6899999999764 36788999999985 233
Q ss_pred cccCCCchhHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCe
Q 017982 254 HRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFL 297 (363)
Q Consensus 254 ~~~kKP~p~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~ 297 (363)
.+ -.|.... ++.+.+.-.-+-++|+||.. .|..+=+.|-+.
T Consensus 619 Ar-~sPe~K~-~iV~~Lq~~G~vVamtGDGv-NDaPALk~ADVG 659 (903)
T PRK15122 619 AK-LTPLQKS-RVLKALQANGHTVGFLGDGI-NDAPALRDADVG 659 (903)
T ss_pred EE-eCHHHHH-HHHHHHHhCCCEEEEECCCc-hhHHHHHhCCEE
Confidence 22 3566432 23333333346799999999 799887777653
No 179
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=94.14 E-value=0.53 Score=43.75 Aligned_cols=94 Identities=10% Similarity=-0.027 Sum_probs=63.2
Q ss_pred CcchhHHHHHH-HHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCC----eEEE----c-ccCC---Cch-h---H
Q 017982 201 TLWGPLSSSIE-QCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGI----KVIR----H-RVKK---PAG-T---A 263 (363)
Q Consensus 201 ~~~p~v~e~L~-~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi----~~I~----~-~~kK---P~p-~---~ 263 (363)
.++|++.+.|+ .++ +.|++++||||+. ...++.+.+..++ .+|. . ..++ |+. + .
T Consensus 94 ~l~pga~e~L~~~l~-~~G~~v~IvSas~--------~~~~~~ia~~~~~~~~~~~i~t~le~~~gg~~~g~~c~g~~Kv 164 (210)
T TIGR01545 94 TAFPLVAERLRQYLE-SSDADIWLITGSP--------QPLVEAVYFDSNFIHRLNLIASQIERGNGGWVLPLRCLGHEKV 164 (210)
T ss_pred CCCccHHHHHHHHHH-hCCCEEEEEcCCc--------HHHHHHHHHhccccccCcEEEEEeEEeCCceEcCccCCChHHH
Confidence 46899999996 666 5799999999996 3567777766332 2331 0 1022 222 1 2
Q ss_pred HHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982 264 EEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS 305 (363)
Q Consensus 264 ~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~ 305 (363)
..+.+.++.+.+.+..-||+. .|+.+-..+| ..++|+|-.
T Consensus 165 ~rl~~~~~~~~~~~~aYsDS~-~D~pmL~~a~-~~~~Vnp~~ 204 (210)
T TIGR01545 165 AQLEQKIGSPLKLYSGYSDSK-QDNPLLAFCE-HRWRVSKRG 204 (210)
T ss_pred HHHHHHhCCChhheEEecCCc-ccHHHHHhCC-CcEEECcch
Confidence 334445676667788999999 7999988888 557787653
No 180
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=93.78 E-value=0.51 Score=49.14 Aligned_cols=106 Identities=16% Similarity=0.213 Sum_probs=76.8
Q ss_pred HHHHcCCCEEEEcCCceeec--CCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEc
Q 017982 177 ELQRRGFKGVVFDKDNTLTA--PYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRH 254 (363)
Q Consensus 177 ~L~~~GIkaVV~DlDnTL~~--~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~ 254 (363)
.+.+.|.+.+.+-.++++.. .-...+.+++.+.++.|+ +.|+++.++|... ...+..+.+.+|+ +
T Consensus 321 ~~~~~g~~~~~~a~~~~~~g~i~l~d~lr~~~~~~i~~l~-~~gi~~~~ltGD~--------~~~a~~ia~~lgi---~- 387 (499)
T TIGR01494 321 ELAQSGLRVLAVASKETLLGLLGLEDPLRDDAKETISELR-EAGIRVIMLTGDN--------VLTAKAIAKELGI---F- 387 (499)
T ss_pred HHHhCCCEEEEEEECCeEEEEEEecCCCchhHHHHHHHHH-HCCCeEEEEcCCC--------HHHHHHHHHHcCc---e-
Confidence 35578999888878877654 245678899999999998 5899999999775 4778888999986 2
Q ss_pred ccCCCchhHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCe
Q 017982 255 RVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFL 297 (363)
Q Consensus 255 ~~kKP~p~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~ 297 (363)
+...|.... ++.+.+.-....++||||.. .|..+-+.+++-
T Consensus 388 ~~~~p~~K~-~~v~~l~~~g~~v~~vGDg~-nD~~al~~Advg 428 (499)
T TIGR01494 388 ARVTPEEKA-ALVEALQKKGRVVAMTGDGV-NDAPALKKADVG 428 (499)
T ss_pred eccCHHHHH-HHHHHHHHCCCEEEEECCCh-hhHHHHHhCCCc
Confidence 233555422 23333333336899999998 799888777643
No 181
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=93.75 E-value=0.38 Score=43.51 Aligned_cols=105 Identities=17% Similarity=0.096 Sum_probs=68.2
Q ss_pred EEEEcCCceeecCC----------CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHh-----CC
Q 017982 185 GVVFDKDNTLTAPY----------SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKI-----GI 249 (363)
Q Consensus 185 aVV~DlDnTL~~~~----------~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~L-----Gi 249 (363)
+||.|+|+||+..+ .....+++.+..+++. +.||+++-+|..+- ......+..+... ++
T Consensus 1 VVvsDIDGTiT~SD~~G~i~~~~G~d~~h~g~~~l~~~i~-~~GY~ilYlTaRp~-----~qa~~Tr~~L~~~~q~~~~l 74 (157)
T PF08235_consen 1 VVVSDIDGTITKSDVLGHILPILGKDWTHPGAAELYRKIA-DNGYKILYLTARPI-----GQANRTRSWLAQHQQQGHNL 74 (157)
T ss_pred CEEEeccCCcCccchhhhhhhccCchhhhhcHHHHHHHHH-HCCeEEEEECcCcH-----HHHHHHHHHHHHHHhCCccC
Confidence 47899999998532 2245789999999998 68999999998862 1234556666666 55
Q ss_pred e---EEEc------------ccCCCchhH-HHHHHHh----C-CCCCcEEEEccCCcccHHHHHHcCCe
Q 017982 250 K---VIRH------------RVKKPAGTA-EEIEKHF----G-CQSSQLIMVGDRPFTDIVYGNRNGFL 297 (363)
Q Consensus 250 ~---~I~~------------~~kKP~p~~-~~alk~l----g-l~pee~vmVGDrL~TDI~~A~raGi~ 297 (363)
| ++.. -.++|.. | ..+|+.+ . ....=..-.|.+. ||+.+=.++|+.
T Consensus 75 P~Gpv~~sP~~l~~al~rEvi~~~p~~-fK~~~L~~l~~~f~~~~~pf~agfGN~~-tDv~aY~~vGip 141 (157)
T PF08235_consen 75 PDGPVLLSPDSLFSALHREVISKDPEE-FKIACLRDLRALFPPDGNPFYAGFGNRS-TDVIAYKAVGIP 141 (157)
T ss_pred CCCCEEECCcchhhhhhccccccChHH-HHHHHHHHHHHhcCCCCCeEEEecCCcH-HHHHHHHHcCCC
Confidence 5 2211 1245654 2 2333333 2 1111234579998 999999999996
No 182
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=93.53 E-value=0.23 Score=54.34 Aligned_cols=58 Identities=21% Similarity=0.155 Sum_probs=46.3
Q ss_pred CCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe
Q 017982 183 FKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK 250 (363)
Q Consensus 183 IkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~ 250 (363)
.|.+++|+|+||... ....++...++|++|+ +.|+.++|+|... ...+..+.+.+++.
T Consensus 416 ~KLIfsDLDGTLLd~-d~~i~~~t~eAL~~L~-ekGI~~VIATGRs--------~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 416 KKIVYTDLDGTLLNP-LTYSYSTALDALRLLK-DKELPLVFCSAKT--------MGEQDLYRNELGIK 473 (694)
T ss_pred eeEEEEECcCCCcCC-CCccCHHHHHHHHHHH-HcCCeEEEEeCCC--------HHHHHHHHHHcCCC
Confidence 578999999999863 3345678899999998 5799999999886 35677788888864
No 183
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=93.11 E-value=1.1 Score=47.30 Aligned_cols=111 Identities=20% Similarity=0.201 Sum_probs=69.9
Q ss_pred cCCCEEEEcCCceeecC----C-----------CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHH
Q 017982 181 RGFKGVVFDKDNTLTAP----Y-----------SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEG 245 (363)
Q Consensus 181 ~GIkaVV~DlDnTL~~~----~-----------~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~ 245 (363)
.-.|++|+|+||||..- . .-..+......+..|+ +.|+-++|.|-+. ...|+.+..
T Consensus 220 ~~kK~LVLDLDNTLWGGVIGedGv~GI~Ls~~~~G~~fk~fQ~~Ik~l~-kqGVlLav~SKN~--------~~da~evF~ 290 (574)
T COG3882 220 KSKKALVLDLDNTLWGGVIGEDGVDGIRLSNSAEGEAFKTFQNFIKGLK-KQGVLLAVCSKNT--------EKDAKEVFR 290 (574)
T ss_pred cccceEEEecCCcccccccccccccceeecCCCCchhHHHHHHHHHHHH-hccEEEEEecCCc--------hhhHHHHHh
Confidence 45689999999999430 0 0124556677788888 6899999999664 234443332
Q ss_pred Hh--------CCeEEEcccCCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCC
Q 017982 246 KI--------GIKVIRHRVKKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPL 304 (363)
Q Consensus 246 ~L--------Gi~~I~~~~kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~ 304 (363)
.- ++..... .--|.. .++++++++++..+..++|.|... .-.--++.+= |-|.+.
T Consensus 291 khp~MiLkeedfa~~~i-NW~~K~eNirkIAkklNlg~dSmvFiDD~p~-ErE~vk~~~~--v~Vi~~ 354 (574)
T COG3882 291 KHPDMILKEEDFAVFQI-NWDPKAENIRKIAKKLNLGLDSMVFIDDNPA-ERELVKRELP--VSVIEF 354 (574)
T ss_pred hCCCeEeeHhhhhhhee-cCCcchhhHHHHHHHhCCCccceEEecCCHH-HHHHHHhcCc--eeeccC
Confidence 21 1111101 113333 478999999999999999999983 5555555543 444444
No 184
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=92.93 E-value=0.15 Score=46.76 Aligned_cols=41 Identities=15% Similarity=0.239 Sum_probs=34.6
Q ss_pred cCCCchhHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeE
Q 017982 256 VKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLT 298 (363)
Q Consensus 256 ~kKP~p~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~T 298 (363)
..|+. ++..+++.+|++++++++|||+. +|+.+...+|...
T Consensus 178 ~~Kg~-al~~l~~~lgi~~~~vi~~GD~~-NDi~ml~~ag~~v 218 (221)
T TIGR02463 178 SSKGK-AANWLKATYNQPDVKTLGLGDGP-NDLPLLEVADYAV 218 (221)
T ss_pred CCHHH-HHHHHHHHhCCCCCcEEEECCCH-HHHHHHHhCCceE
Confidence 34544 36889999999999999999999 7999999999653
No 185
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=92.79 E-value=0.24 Score=47.55 Aligned_cols=58 Identities=21% Similarity=0.260 Sum_probs=42.6
Q ss_pred CCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe
Q 017982 182 GFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK 250 (363)
Q Consensus 182 GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~ 250 (363)
-+++++.|+|+||.. +..+ +..+.+++.+|+ +.|+.|+.+|.+. ......+-+.+|++
T Consensus 6 ~~~lIFtDlD~TLl~-~~ye-~~pA~pv~~el~-d~G~~Vi~~SSKT--------~aE~~~l~~~l~v~ 63 (274)
T COG3769 6 MPLLIFTDLDGTLLP-HSYE-WQPAAPVLLELK-DAGVPVILCSSKT--------RAEMLYLQKSLGVQ 63 (274)
T ss_pred cceEEEEcccCcccC-CCCC-CCccchHHHHHH-HcCCeEEEeccch--------HHHHHHHHHhcCCC
Confidence 467788999999986 2322 334567899998 6899999999985 24455666777765
No 186
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=92.02 E-value=0.42 Score=52.37 Aligned_cols=50 Identities=16% Similarity=0.092 Sum_probs=40.1
Q ss_pred HHcCCCEEEEcCCceeecCC----CCCcchhHHHHHHHHHHhCCCeEEEEeCCC
Q 017982 179 QRRGFKGVVFDKDNTLTAPY----SLTLWGPLSSSIEQCKSVFGHDIAVFSNSA 228 (363)
Q Consensus 179 ~~~GIkaVV~DlDnTL~~~~----~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~ 228 (363)
++...+.+++|+|+||+... ...+.+++.++|++|.+..|..++|+|..+
T Consensus 488 ~~~~~rLi~~D~DGTL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~ 541 (726)
T PRK14501 488 RAASRRLLLLDYDGTLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRD 541 (726)
T ss_pred HhccceEEEEecCccccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEEeCCC
Confidence 45678999999999998632 224578999999999854689999999886
No 187
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=91.65 E-value=0.17 Score=45.69 Aligned_cols=35 Identities=14% Similarity=0.233 Sum_probs=31.9
Q ss_pred hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCe
Q 017982 262 TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFL 297 (363)
Q Consensus 262 ~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~ 297 (363)
.++.++++++++++++++|||+. +|+.++..+|+.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~GD~~-nD~~~~~~~~~~ 201 (204)
T TIGR01484 167 ALQALLKELNGKRDEILAFGDSG-NDEEMFEVAGLA 201 (204)
T ss_pred HHHHHHHHhCCCHHHEEEEcCCH-HHHHHHHHcCCc
Confidence 46888999999999999999998 899999999875
No 188
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=91.21 E-value=1.1 Score=41.92 Aligned_cols=85 Identities=15% Similarity=0.146 Sum_probs=53.3
Q ss_pred CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhC----Ce---EEE----------cccCCC--ch
Q 017982 201 TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIG----IK---VIR----------HRVKKP--AG 261 (363)
Q Consensus 201 ~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LG----i~---~I~----------~~~kKP--~p 261 (363)
.+-|+.+++++.++ +.+++++|||.+. + ..+..+.+.++ +. .++ |.+.-| ++
T Consensus 73 ~Idp~fKef~e~ik-e~di~fiVvSsGm-----~---~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i~~~~ds~ 143 (220)
T COG4359 73 KIDPGFKEFVEWIK-EHDIPFIVVSSGM-----D---PFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSIKYTDDSQ 143 (220)
T ss_pred ccCccHHHHHHHHH-HcCCCEEEEeCCC-----c---hHHHHHHHhhccccceeeeEEeecCceEcCCCceeeecCCccc
Confidence 45677788888887 5788999999885 2 34555555544 21 111 111111 11
Q ss_pred -hH--HHHHHHhCCCCCcEEEEccCCcccHHHHHHcC
Q 017982 262 -TA--EEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNG 295 (363)
Q Consensus 262 -~~--~~alk~lgl~pee~vmVGDrL~TDI~~A~raG 295 (363)
+. -..++.+.-.++.++|+||+. +|+.+|+..-
T Consensus 144 fG~dK~~vI~~l~e~~e~~fy~GDsv-sDlsaaklsD 179 (220)
T COG4359 144 FGHDKSSVIHELSEPNESIFYCGDSV-SDLSAAKLSD 179 (220)
T ss_pred cCCCcchhHHHhhcCCceEEEecCCc-ccccHhhhhh
Confidence 11 134555666778899999999 8999998654
No 189
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=91.04 E-value=0.27 Score=46.92 Aligned_cols=40 Identities=15% Similarity=0.286 Sum_probs=34.6
Q ss_pred hHHHHHHHhCCCC-CcEEEEccCCcccHHHHHHcCCeEEEEc
Q 017982 262 TAEEIEKHFGCQS-SQLIMVGDRPFTDIVYGNRNGFLTILTE 302 (363)
Q Consensus 262 ~~~~alk~lgl~p-ee~vmVGDrL~TDI~~A~raGi~TIlV~ 302 (363)
++.++++.+|+++ +++++|||+. +|+.++..+|+..+.-+
T Consensus 194 al~~l~~~~~i~~~~~v~~~GDs~-NDi~m~~~ag~~vam~N 234 (273)
T PRK00192 194 AVRWLKELYRRQDGVETIALGDSP-NDLPMLEAADIAVVVPG 234 (273)
T ss_pred HHHHHHHHHhccCCceEEEEcCCh-hhHHHHHhCCeeEEeCC
Confidence 4688899999999 9999999999 79999999997654444
No 190
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=90.84 E-value=0.25 Score=45.90 Aligned_cols=39 Identities=13% Similarity=0.181 Sum_probs=33.0
Q ss_pred hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEc
Q 017982 262 TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTE 302 (363)
Q Consensus 262 ~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~ 302 (363)
++..+++++|++++++++|||+. +|+.+...+|. ++.|.
T Consensus 163 al~~l~~~~g~~~~~~i~~GD~~-nD~~ml~~~~~-~iav~ 201 (236)
T TIGR02471 163 ALRYLSYRWGLPLEQILVAGDSG-NDEEMLRGLTL-GVVVG 201 (236)
T ss_pred HHHHHHHHhCCCHHHEEEEcCCc-cHHHHHcCCCc-EEEEc
Confidence 35889999999999999999998 89999998874 45553
No 191
>PLN03017 trehalose-phosphatase
Probab=90.76 E-value=0.59 Score=47.63 Aligned_cols=44 Identities=14% Similarity=0.164 Sum_probs=35.1
Q ss_pred CCEEEEcCCceeec----CCCCCcchhHHHHHHHHHHhCCCeEEEEeCCC
Q 017982 183 FKGVVFDKDNTLTA----PYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSA 228 (363)
Q Consensus 183 IkaVV~DlDnTL~~----~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~ 228 (363)
-.++++|+|+||.. +....+.+++.++|++|. .|+.++|+|..+
T Consensus 111 ~~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~La--~~~~vaIvSGR~ 158 (366)
T PLN03017 111 QIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKLA--KCFPTAIVTGRC 158 (366)
T ss_pred CeEEEEecCCcCcCCcCCcccccCCHHHHHHHHHHh--cCCcEEEEeCCC
Confidence 34667799999982 344468899999999998 378999999886
No 192
>PLN02151 trehalose-phosphatase
Probab=90.57 E-value=0.61 Score=47.34 Aligned_cols=43 Identities=16% Similarity=0.203 Sum_probs=35.6
Q ss_pred CEEEEcCCceee----cCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCC
Q 017982 184 KGVVFDKDNTLT----APYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSA 228 (363)
Q Consensus 184 kaVV~DlDnTL~----~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~ 228 (363)
.++++|+|+||. .+....+.+++.++|+.|.+ +..++|+|..+
T Consensus 99 ~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La~--~~~vaIvSGR~ 145 (354)
T PLN02151 99 IVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLAK--CFPTAIVSGRC 145 (354)
T ss_pred eEEEEecCccCCCCCCCcccccCCHHHHHHHHHHhc--CCCEEEEECCC
Confidence 467789999998 45555788999999999973 56999999886
No 193
>KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism]
Probab=90.57 E-value=1.3 Score=42.70 Aligned_cols=95 Identities=18% Similarity=0.268 Sum_probs=67.8
Q ss_pred CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhC----C-eEEE------cccCCCchhHHHHHHH
Q 017982 201 TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIG----I-KVIR------HRVKKPAGTAEEIEKH 269 (363)
Q Consensus 201 ~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LG----i-~~I~------~~~kKP~p~~~~alk~ 269 (363)
.+++++..+++..+ ..|++++|.|... ..+.+++-... + +++. .+.|.-...+.+|.+.
T Consensus 123 ~v~aDv~~a~e~w~-~~g~~vyIYSSgs---------v~AqKllfg~s~~gdl~~y~~gyfDt~iG~K~e~~sy~~I~~~ 192 (254)
T KOG2630|consen 123 HVYADVLPAIERWS-GEGVRVYIYSSGS---------VAAQKLLFGYSDAGDLRKYISGYFDTTIGLKVESQSYKKIGHL 192 (254)
T ss_pred cccchhHHHHHHHh-hcCceEEEEcCCc---------HHHHHHHHcccCcchHHHHhhhhhhccccceehhHHHHHHHHH
Confidence 57899999999988 6899999999875 22333222111 1 0111 1223333367889999
Q ss_pred hCCCCCcEEEEccCCcccHHHHHHcCCeEEEEc-CCCC
Q 017982 270 FGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTE-PLSL 306 (363)
Q Consensus 270 lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~-p~~~ 306 (363)
+|.++.++++.-|-. .-..+|+.+|+.+.++. |++.
T Consensus 193 Ig~s~~eiLfLTd~~-~Ea~aa~~aGl~a~l~~rPgna 229 (254)
T KOG2630|consen 193 IGKSPREILFLTDVP-REAAAARKAGLQAGLVSRPGNA 229 (254)
T ss_pred hCCChhheEEeccCh-HHHHHHHhcccceeeeecCCCC
Confidence 999999999999987 67899999999998874 6654
No 194
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=90.43 E-value=0.76 Score=42.83 Aligned_cols=60 Identities=23% Similarity=0.216 Sum_probs=46.1
Q ss_pred HcCCCEEEEcCCceeecCCC------CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCC
Q 017982 180 RRGFKGVVFDKDNTLTAPYS------LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGI 249 (363)
Q Consensus 180 ~~GIkaVV~DlDnTL~~~~~------~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi 249 (363)
+.|.+.+|+|+|.||..... .-.-|.+.++|+.+.+ .|.|+|-|.+. ..-+..++..+|+
T Consensus 18 ~~~kklLVLDLDeTLvh~~~~~~~~~~~kRP~l~eFL~~~~~--~feIvVwTAa~--------~~ya~~~l~~l~~ 83 (195)
T TIGR02245 18 REGKKLLVLDIDYTLFDHRSPAETGEELMRPYLHEFLTSAYE--DYDIVIWSATS--------MKWIEIKMTELGV 83 (195)
T ss_pred CCCCcEEEEeCCCceEcccccCCCceEEeCCCHHHHHHHHHh--CCEEEEEecCC--------HHHHHHHHHHhcc
Confidence 46899999999999985321 1246899999999984 67999999885 3567777777653
No 195
>PLN02580 trehalose-phosphatase
Probab=89.77 E-value=1.1 Score=46.07 Aligned_cols=47 Identities=17% Similarity=0.299 Sum_probs=36.5
Q ss_pred HcCCCEEEEcCCceeec----CCCCCcchhHHHHHHHHHHhCCCeEEEEeCCC
Q 017982 180 RRGFKGVVFDKDNTLTA----PYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSA 228 (363)
Q Consensus 180 ~~GIkaVV~DlDnTL~~----~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~ 228 (363)
+..-.++++|+|+||+. +....+.+++.+.|++|.+ . .+++|||..+
T Consensus 116 ~~k~~~LfLDyDGTLaPIv~~Pd~A~~s~~~~~aL~~La~-~-~~VAIVSGR~ 166 (384)
T PLN02580 116 KGKKIALFLDYDGTLSPIVDDPDRALMSDAMRSAVKNVAK-Y-FPTAIISGRS 166 (384)
T ss_pred hcCCeEEEEecCCccCCCCCCcccccCCHHHHHHHHHHhh-C-CCEEEEeCCC
Confidence 34455778899999974 3444678999999999984 3 4899999886
No 196
>PLN02423 phosphomannomutase
Probab=89.69 E-value=0.56 Score=44.52 Aligned_cols=44 Identities=20% Similarity=0.146 Sum_probs=34.8
Q ss_pred CCCEEE-EcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCC
Q 017982 182 GFKGVV-FDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSA 228 (363)
Q Consensus 182 GIkaVV-~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~ 228 (363)
..+.++ +|+|+||.. ....+.+...++|++|+ +. +.++|+|...
T Consensus 5 ~~~~i~~~D~DGTLl~-~~~~i~~~~~~ai~~l~-~~-i~fviaTGR~ 49 (245)
T PLN02423 5 KPGVIALFDVDGTLTA-PRKEATPEMLEFMKELR-KV-VTVGVVGGSD 49 (245)
T ss_pred ccceEEEEeccCCCcC-CCCcCCHHHHHHHHHHH-hC-CEEEEECCcC
Confidence 456555 999999986 44457889999999998 44 8999999774
No 197
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=89.24 E-value=0.38 Score=45.13 Aligned_cols=35 Identities=20% Similarity=0.328 Sum_probs=32.3
Q ss_pred hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCe
Q 017982 262 TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFL 297 (363)
Q Consensus 262 ~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~ 297 (363)
+++.+++.+|++++++++|||+. .|+.+...+|+.
T Consensus 192 ~i~~~~~~~~~~~~~~~~~GD~~-nD~~m~~~~~~~ 226 (256)
T TIGR00099 192 ALQSLAEALGISLEDVIAFGDGM-NDIEMLEAAGYG 226 (256)
T ss_pred HHHHHHHHcCCCHHHEEEeCCcH-HhHHHHHhCCce
Confidence 46889999999999999999999 799999999975
No 198
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=89.14 E-value=1.2 Score=49.66 Aligned_cols=66 Identities=21% Similarity=0.179 Sum_probs=47.0
Q ss_pred HHHcCCCEEEEcCCceeecCCC-------CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe
Q 017982 178 LQRRGFKGVVFDKDNTLTAPYS-------LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK 250 (363)
Q Consensus 178 L~~~GIkaVV~DlDnTL~~~~~-------~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~ 250 (363)
++...-+++++|+|+||+.... ..+.|++.+.|++|.+..+-.|+|||..+ ...++.+....++.
T Consensus 502 y~~a~~rll~LDyDGTL~~~~~~~~~p~~a~p~~~l~~~L~~L~~d~~~~V~IvSGR~--------~~~L~~~~~~~~l~ 573 (797)
T PLN03063 502 YSKSNNRLLILGFYGTLTEPRNSQIKEMDLGLHPELKETLKALCSDPKTTVVVLSRSG--------KDILDKNFGEYNIW 573 (797)
T ss_pred HHhccCeEEEEecCccccCCCCCccccccCCCCHHHHHHHHHHHcCCCCEEEEEeCCC--------HHHHHHHhCCCCCc
Confidence 3456668999999999985422 23678999999999865566899999885 34555555544444
Q ss_pred E
Q 017982 251 V 251 (363)
Q Consensus 251 ~ 251 (363)
.
T Consensus 574 l 574 (797)
T PLN03063 574 L 574 (797)
T ss_pred E
Confidence 3
No 199
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=89.12 E-value=1.4 Score=42.38 Aligned_cols=84 Identities=19% Similarity=0.251 Sum_probs=51.3
Q ss_pred CcchhHHHHHHHHHHhCC-CeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeE-------------------EE-----cc
Q 017982 201 TLWGPLSSSIEQCKSVFG-HDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV-------------------IR-----HR 255 (363)
Q Consensus 201 ~~~p~v~e~L~~Lk~~~G-ikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~-------------------I~-----~~ 255 (363)
...|++.++++.++ +.| +.+.|||.... -.++.++++.|+.- |. |.
T Consensus 84 P~~Pgmv~lik~~a-k~g~~eliIVSDaNs--------fFIe~~Lea~~~~d~F~~IfTNPa~~da~G~L~v~pyH~~hs 154 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAA-KLGCFELIIVSDANS--------FFIEEILEAAGIHDLFSEIFTNPACVDASGRLLVRPYHTQHS 154 (256)
T ss_pred CCCccHHHHHHHHH-hCCCceEEEEecCch--------hHHHHHHHHccHHHHHHHHhcCCcccCCCCcEEeecCCCCCc
Confidence 35788888888887 456 48999997753 34566666666531 11 11
Q ss_pred cC--CCch----hHHHHHHH---hCCCCCcEEEEccCCcccHHHHHHc
Q 017982 256 VK--KPAG----TAEEIEKH---FGCQSSQLIMVGDRPFTDIVYGNRN 294 (363)
Q Consensus 256 ~k--KP~p----~~~~alk~---lgl~pee~vmVGDrL~TDI~~A~ra 294 (363)
+. +++- .++++... -|+..++.++|||.- .|+-.-.+.
T Consensus 155 C~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~-nD~CP~l~L 201 (256)
T KOG3120|consen 155 CNLCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGA-NDFCPVLRL 201 (256)
T ss_pred cCcCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCC-CCcCcchhc
Confidence 11 2221 13332222 278888999999998 688665443
No 200
>KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=88.93 E-value=0.95 Score=46.64 Aligned_cols=52 Identities=19% Similarity=0.410 Sum_probs=42.2
Q ss_pred HHHHHHHhCCCCCcEEEEccCCcccHHHHH-HcCCeEEEEcCCCCCCchhHHH
Q 017982 263 AEEIEKHFGCQSSQLIMVGDRPFTDIVYGN-RNGFLTILTEPLSLAEEPFIVR 314 (363)
Q Consensus 263 ~~~alk~lgl~pee~vmVGDrL~TDI~~A~-raGi~TIlV~p~~~~~e~~~t~ 314 (363)
.+.+++.+++.-.++++|||.++.||.-.+ +-|.+|++|-|....+...++.
T Consensus 293 ~~~~~~~l~~~g~diLy~gdHi~~dvl~skk~~~wrt~lv~peL~~e~~v~~~ 345 (424)
T KOG2469|consen 293 LKTVETSMKVKGKDILYGGDHIWGDVLVSKKRRGWRTVLVAPELEREDLVLLD 345 (424)
T ss_pred HHHHHHHhcccccceeecccceeeeEEecceecceEEEEEehhhhhhhhhhcc
Confidence 366778888888999999999999998755 7799999998877665555554
No 201
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=88.80 E-value=1.3 Score=49.93 Aligned_cols=59 Identities=12% Similarity=0.103 Sum_probs=44.6
Q ss_pred ccCCChHH----HHHcCCCEEEEcCCceeecCC--CCCcchhHHHHHHHHHHhCCCeEEEEeCCC
Q 017982 170 IRYIDWAE----LQRRGFKGVVFDKDNTLTAPY--SLTLWGPLSSSIEQCKSVFGHDIAVFSNSA 228 (363)
Q Consensus 170 I~~Id~~~----L~~~GIkaVV~DlDnTL~~~~--~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~ 228 (363)
+..++.+. .+....+++++|+|+||.... ...+.+++.+.|++|.+..|..++|+|..+
T Consensus 579 ~~~l~~~~i~~~y~~~~~rlI~LDyDGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~ 643 (854)
T PLN02205 579 FRKLSMEHIVSAYKRTTTRAILLDYDGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARS 643 (854)
T ss_pred ccccCHHHHHHHHHhhcCeEEEEecCCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCC
Confidence 44455443 346788999999999998543 235668999999998556788999999886
No 202
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=88.34 E-value=1.5 Score=43.32 Aligned_cols=58 Identities=19% Similarity=0.186 Sum_probs=44.0
Q ss_pred CEEEEcCCceeecCCCC--CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe
Q 017982 184 KGVVFDKDNTLTAPYSL--TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK 250 (363)
Q Consensus 184 kaVV~DlDnTL~~~~~~--~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~ 250 (363)
.+||||+|+||...... ...|.+.+.|.+|+ +.|..+++=|-+. .+.+..-++.++++
T Consensus 123 hVIVfDlD~TLItd~~~v~Ir~~~v~~sL~~Lk-~~g~vLvLWSyG~--------~eHV~~sl~~~~L~ 182 (297)
T PF05152_consen 123 HVIVFDLDSTLITDEGDVRIRDPAVYDSLRELK-EQGCVLVLWSYGN--------REHVRHSLKELKLE 182 (297)
T ss_pred cEEEEECCCcccccCCccccCChHHHHHHHHHH-HcCCEEEEecCCC--------HHHHHHHHHHhCCc
Confidence 58999999999853332 35688999999999 5786677777664 46777888888876
No 203
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=87.99 E-value=2 Score=49.39 Aligned_cols=86 Identities=14% Similarity=0.183 Sum_probs=60.1
Q ss_pred CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe---------------E-------------
Q 017982 200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK---------------V------------- 251 (363)
Q Consensus 200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~---------------~------------- 251 (363)
..+.|++.+++++|+ +.|+++.++|.-. ...+..+.+.+|+. +
T Consensus 645 Dp~r~~v~~aI~~l~-~aGIkv~MiTGD~--------~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~ 715 (1053)
T TIGR01523 645 DPPRNESAGAVEKCH-QAGINVHMLTGDF--------PETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEE 715 (1053)
T ss_pred cCCchhHHHHHHHHH-HCCCEEEEECCCC--------HHHHHHHHHHcCCCCccccccccccccceeeehHHhhhcCHHH
Confidence 357889999999998 6899999999775 36677888888872 0
Q ss_pred ---------EEcccCCCchhHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCe
Q 017982 252 ---------IRHRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFL 297 (363)
Q Consensus 252 ---------I~~~~kKP~p~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~ 297 (363)
++. .-.|.... .+++.+.-.-+.++|+||.. .|..+=+.|.+.
T Consensus 716 l~~~~~~~~V~a-r~sP~~K~-~iV~~lq~~g~~Vam~GDGv-NDapaLk~AdVG 767 (1053)
T TIGR01523 716 VDDLKALCLVIA-RCAPQTKV-KMIEALHRRKAFCAMTGDGV-NDSPSLKMANVG 767 (1053)
T ss_pred HHHHhhcCeEEE-ecCHHHHH-HHHHHHHhcCCeeEEeCCCc-chHHHHHhCCcc
Confidence 111 22444321 23344433446799999999 899998887653
No 204
>COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=87.81 E-value=1.4 Score=46.34 Aligned_cols=88 Identities=18% Similarity=0.183 Sum_probs=65.9
Q ss_pred HHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe-----EEE---cccCCCch-hHHHHHHHhCCCCCcE
Q 017982 207 SSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK-----VIR---HRVKKPAG-TAEEIEKHFGCQSSQL 277 (363)
Q Consensus 207 ~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~-----~I~---~~~kKP~p-~~~~alk~lgl~pee~ 277 (363)
.+..+.+. ..|.+|+++|.--- | .+..+.++..+|-+ +.. ...+|-+. .|..+++.-++++.+.
T Consensus 105 ~eL~e~ai-~n~krVIlISDMYl-----p-s~Il~~~L~s~g~d~~nipiY~S~e~rl~KnSg~LFk~Vlk~EnVd~~~w 177 (635)
T COG5610 105 IELVEEAI-KNEKRVILISDMYL-----P-SSILRTFLNSFGPDFNNIPIYMSSEFRLKKNSGNLFKAVLKLENVDPKKW 177 (635)
T ss_pred hHHHHHHH-hCCCeEEEEecccC-----c-HHHHHHHHHhcCCCccCceeeecceeehhcccchHHHHHHhhcCCChhhe
Confidence 34556665 45889999998741 2 45678888888754 221 23456555 4678888889999999
Q ss_pred EEEccCCcccHHHHHHcCCeEEEE
Q 017982 278 IMVGDRPFTDIVYGNRNGFLTILT 301 (363)
Q Consensus 278 vmVGDrL~TDI~~A~raGi~TIlV 301 (363)
++|||....|++.++.+|+.|...
T Consensus 178 ~H~GDN~~aD~l~pk~LgI~Tlf~ 201 (635)
T COG5610 178 IHCGDNWVADYLKPKNLGISTLFY 201 (635)
T ss_pred EEecCchhhhhcCccccchhHHHH
Confidence 999999999999999999988654
No 205
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=87.26 E-value=2.1 Score=48.70 Aligned_cols=67 Identities=21% Similarity=0.174 Sum_probs=47.8
Q ss_pred HHHcCCCEEEEcCCceeecCC-------------CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHH
Q 017982 178 LQRRGFKGVVFDKDNTLTAPY-------------SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLE 244 (363)
Q Consensus 178 L~~~GIkaVV~DlDnTL~~~~-------------~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~ 244 (363)
++...-+++++|+|+||+... ...+.|++.+.|+.|.+..+-.|+|||..+ ...++.++
T Consensus 586 y~~a~~RLlfLDyDGTLap~~~~P~~~~~~~~~~~a~p~p~l~~~L~~L~~dp~n~VaIVSGR~--------~~~Le~~f 657 (934)
T PLN03064 586 YLQSNNRLLILGFNATLTEPVDTPGRRGDQIKEMELRLHPELKEPLRALCSDPKTTIVVLSGSD--------RSVLDENF 657 (934)
T ss_pred HHhccceEEEEecCceeccCCCCcccccccccccccCCCHHHHHHHHHHHhCCCCeEEEEeCCC--------HHHHHHHh
Confidence 346667899999999998531 223568899999999865566899999986 35566666
Q ss_pred HHhCCeEE
Q 017982 245 GKIGIKVI 252 (363)
Q Consensus 245 ~~LGi~~I 252 (363)
..+++..+
T Consensus 658 g~~~L~La 665 (934)
T PLN03064 658 GEFDMWLA 665 (934)
T ss_pred CCCCceEE
Confidence 55555433
No 206
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=86.69 E-value=1.9 Score=42.20 Aligned_cols=49 Identities=22% Similarity=0.153 Sum_probs=37.8
Q ss_pred HcCCCEEEEcCCceeec----CCCCCcchhHHHHHHHHHHhCCCeEEEEeCCC
Q 017982 180 RRGFKGVVFDKDNTLTA----PYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSA 228 (363)
Q Consensus 180 ~~GIkaVV~DlDnTL~~----~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~ 228 (363)
...-+++++|+|+||+. +....+.+++.+.|++|..+....++|+|..+
T Consensus 15 ~a~~~~~~lDyDGTl~~i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~ 67 (266)
T COG1877 15 NARKRLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRS 67 (266)
T ss_pred cccceEEEEeccccccccccCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCC
Confidence 45678999999999974 33445788999999999854434599999875
No 207
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=86.09 E-value=0.97 Score=41.97 Aligned_cols=53 Identities=15% Similarity=0.163 Sum_probs=38.4
Q ss_pred EEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe
Q 017982 186 VVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK 250 (363)
Q Consensus 186 VV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~ 250 (363)
+++|+|+||.. ....+ ++..++++ ++ +.|+.++|+|..+ ...+..++..+++.
T Consensus 2 i~~DlDgTLl~-~~~~~-~~~~~~~~-~~-~~gi~~viaTGR~--------~~~v~~~~~~l~l~ 54 (236)
T TIGR02471 2 IITDLDNTLLG-DDEGL-ASFVELLR-GS-GDAVGFGIATGRS--------VESAKSRYAKLNLP 54 (236)
T ss_pred eEEeccccccC-CHHHH-HHHHHHHH-hc-CCCceEEEEeCCC--------HHHHHHHHHhCCCC
Confidence 67899999985 33333 34446676 45 5799999999886 46778888888763
No 208
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=86.08 E-value=1.1 Score=40.48 Aligned_cols=39 Identities=18% Similarity=0.296 Sum_probs=33.4
Q ss_pred hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEc
Q 017982 262 TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTE 302 (363)
Q Consensus 262 ~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~ 302 (363)
+++.+++.+|++++++++|||+. .|+.+-..+|.. +.+.
T Consensus 190 ai~~l~~~~~i~~~~~~~~GD~~-ND~~Ml~~~~~~-~am~ 228 (254)
T PF08282_consen 190 AIKYLLEYLGISPEDIIAFGDSE-NDIEMLELAGYS-VAMG 228 (254)
T ss_dssp HHHHHHHHHTTSGGGEEEEESSG-GGHHHHHHSSEE-EEET
T ss_pred HHHHHhhhcccccceeEEeeccc-ccHhHHhhcCeE-EEEc
Confidence 46888999999999999999999 899999999853 4444
No 209
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=85.37 E-value=0.96 Score=42.58 Aligned_cols=35 Identities=20% Similarity=0.443 Sum_probs=32.0
Q ss_pred hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCe
Q 017982 262 TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFL 297 (363)
Q Consensus 262 ~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~ 297 (363)
+++.+++.+|+++++++.|||.. .|+.+-+.+|..
T Consensus 200 al~~l~~~~gi~~~~v~afGD~~-NDi~Ml~~ag~~ 234 (270)
T PRK10513 200 GVKSLAEHLGIKPEEVMAIGDQE-NDIAMIEYAGVG 234 (270)
T ss_pred HHHHHHHHhCCCHHHEEEECCch-hhHHHHHhCCce
Confidence 46889999999999999999998 899999999973
No 210
>PRK10976 putative hydrolase; Provisional
Probab=85.27 E-value=0.79 Score=43.16 Aligned_cols=35 Identities=23% Similarity=0.217 Sum_probs=32.0
Q ss_pred hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCe
Q 017982 262 TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFL 297 (363)
Q Consensus 262 ~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~ 297 (363)
+++.+++++|+++++++.|||.. .|+.+-..+|..
T Consensus 194 al~~l~~~lgi~~~~viafGD~~-NDi~Ml~~ag~~ 228 (266)
T PRK10976 194 ALEAVAKKLGYSLKDCIAFGDGM-NDAEMLSMAGKG 228 (266)
T ss_pred HHHHHHHHcCCCHHHeEEEcCCc-ccHHHHHHcCCC
Confidence 46889999999999999999998 899999999974
No 211
>KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=84.64 E-value=1.7 Score=44.28 Aligned_cols=95 Identities=18% Similarity=0.267 Sum_probs=59.1
Q ss_pred chhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCc-----cHHHHHHHHHHhCCeEEEcccCCCc---------hh------
Q 017982 203 WGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDN-----DASKARKLEGKIGIKVIRHRVKKPA---------GT------ 262 (363)
Q Consensus 203 ~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp-----~~~~a~~i~~~LGi~~I~~~~kKP~---------p~------ 262 (363)
.|.+..+|++|+ ..|.+++++||++.++- |. .|...+.+ +++ +...+.||. ..
T Consensus 242 ~~ql~~fl~kL~-~~GKklFLiTNSPysFV-d~GM~flvG~~WRdl---FDV--VIvqA~KP~Fftde~rPfR~~dek~~ 314 (510)
T KOG2470|consen 242 NPQLLAFLRKLK-DHGKKLFLITNSPYSFV-DKGMRFLVGDDWRDL---FDV--VIVQANKPEFFTDERRPFRKYDEKRG 314 (510)
T ss_pred cHHHHHHHHHHH-HhcCcEEEEeCCchhhh-hcCceeeeCccHHhh---hhe--eEEecCCCcccccccCcchhhccccc
Confidence 578889999998 58999999999985441 10 01111111 111 111112221 11
Q ss_pred --------------------HHHHHHHhCCCCCcEEEEccCCcccHHHHH-HcCCeEEEEcCC
Q 017982 263 --------------------AEEIEKHFGCQSSQLIMVGDRPFTDIVYGN-RNGFLTILTEPL 304 (363)
Q Consensus 263 --------------------~~~alk~lgl~pee~vmVGDrL~TDI~~A~-raGi~TIlV~p~ 304 (363)
+...++.-|-.-.+++++||.++.|+..-. +.|.+|-.+-|.
T Consensus 315 sl~wdkv~klekgkiYy~G~l~~flelt~WrG~~VlYFGDHlySDLad~tlkhgWRTgAII~E 377 (510)
T KOG2470|consen 315 SLLWDKVDKLEKGKIYYQGNLKSFLELTGWRGPRVLYFGDHLYSDLADLTLKHGWRTGAIIPE 377 (510)
T ss_pred chhhhhhhhcccCceeeeccHHHHHHHhccCCCeeEEecCcchhhhhhhHhhcccccccchHH
Confidence 233444456677899999999999998866 889888777543
No 212
>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]
Probab=84.16 E-value=7.3 Score=34.51 Aligned_cols=43 Identities=12% Similarity=0.113 Sum_probs=35.9
Q ss_pred CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeE
Q 017982 201 TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV 251 (363)
Q Consensus 201 ~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~ 251 (363)
..|+++...|..|+ +.|+.++++||... -..+..+++.+.++.
T Consensus 44 ~fY~Di~rIL~dLk-~~GVtl~~ASRt~a-------p~iA~q~L~~fkvk~ 86 (144)
T KOG4549|consen 44 IFYDDIRRILVDLK-KLGVTLIHASRTMA-------PQIASQGLETFKVKQ 86 (144)
T ss_pred eeccchhHHHHHHH-hcCcEEEEecCCCC-------HHHHHHHHHHhccCc
Confidence 47899999999999 68999999999963 367778888888764
No 213
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=83.64 E-value=1.5 Score=44.14 Aligned_cols=87 Identities=23% Similarity=0.268 Sum_probs=53.6
Q ss_pred EEEEeCCCCCCCCC----c--cH---HHHHHHHHHh-CCeEEEcccCCCch-hHHHH---HH-----HhC-CCCCcEEEE
Q 017982 221 IAVFSNSAGLYEYD----N--DA---SKARKLEGKI-GIKVIRHRVKKPAG-TAEEI---EK-----HFG-CQSSQLIMV 280 (363)
Q Consensus 221 l~IVSN~~g~~~~d----p--~~---~~a~~i~~~L-Gi~~I~~~~kKP~p-~~~~a---lk-----~lg-l~pee~vmV 280 (363)
-+.+||.+-.+..+ . .+ ..++.+-+.+ |-+.-+...+||.+ .++.| +. ..+ -++.++-||
T Consensus 224 piy~sN~DLlW~~e~~lpR~G~GaF~l~lesiy~kltGk~L~~~t~GKPt~ltY~~A~~vl~~~ak~~~~~~~~k~lymv 303 (389)
T KOG1618|consen 224 PIYASNMDLLWMAEYKLPRFGHGAFRLCLESIYQKLTGKPLRYTTLGKPTKLTYDYAEDVLRRQAKRRGGAAPIKKLYMV 303 (389)
T ss_pred ceEEecccccccccCCCccccchHHHHHHHHHHHHhcCCcccccccCCCceehHHhHHHHHHHHHHhhcccCCcceeeee
Confidence 46778887655322 1 11 1223443443 33322235789998 34322 22 223 356788899
Q ss_pred ccCCcccHHHHH---------------HcCCeEEEEcCCCCC
Q 017982 281 GDRPFTDIVYGN---------------RNGFLTILTEPLSLA 307 (363)
Q Consensus 281 GDrL~TDI~~A~---------------raGi~TIlV~p~~~~ 307 (363)
||...+||.+|+ .-|+.+|||..++-.
T Consensus 304 GDNP~sDv~GA~lf~~yap~~~~g~~~~~~w~SILV~TGV~~ 345 (389)
T KOG1618|consen 304 GDNPMSDVRGANLFHQYAPELGAGGSANYGWISILVRTGVYN 345 (389)
T ss_pred cCCCcccccccccccccccccccccccCCCceEEEEeeeeec
Confidence 999999999998 678899999876644
No 214
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=83.01 E-value=1.5 Score=41.33 Aligned_cols=37 Identities=14% Similarity=0.338 Sum_probs=32.3
Q ss_pred hHHHHHHHhCCC--CCcEEEEccCCcccHHHHHHcCCeEE
Q 017982 262 TAEEIEKHFGCQ--SSQLIMVGDRPFTDIVYGNRNGFLTI 299 (363)
Q Consensus 262 ~~~~alk~lgl~--pee~vmVGDrL~TDI~~A~raGi~TI 299 (363)
+++.+++.+|++ .+++++|||+. +|+.+.+.+|...+
T Consensus 180 ai~~l~~~~~i~~~~~~~~a~GD~~-ND~~Ml~~ag~~va 218 (256)
T TIGR01486 180 AANALKQFYNQPGGAIKVVGLGDSP-NDLPLLEVVDLAVV 218 (256)
T ss_pred HHHHHHHHHhhcCCCceEEEEcCCH-hhHHHHHHCCEEEE
Confidence 367889999999 99999999999 89999999996433
No 215
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=81.52 E-value=5.5 Score=37.87 Aligned_cols=54 Identities=15% Similarity=0.270 Sum_probs=37.1
Q ss_pred CeEEEcccCCCchhHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982 249 IKVIRHRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS 305 (363)
Q Consensus 249 i~~I~~~~kKP~p~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~ 305 (363)
++++...+.|-. ++..+++++++++++++.+||+. +|+.+- ..+..+|.|....
T Consensus 157 ldilP~~a~K~~-Al~~L~~~~~~~~~~vl~aGDSg-ND~~mL-~~~~~~vvV~Na~ 210 (247)
T PF05116_consen 157 LDILPKGASKGA-ALRYLMERWGIPPEQVLVAGDSG-NDLEML-EGGDHGVVVGNAQ 210 (247)
T ss_dssp EEEEETT-SHHH-HHHHHHHHHT--GGGEEEEESSG-GGHHHH-CCSSEEEE-TTS-
T ss_pred EEEccCCCCHHH-HHHHHHHHhCCCHHHEEEEeCCC-CcHHHH-cCcCCEEEEcCCC
Confidence 344433444433 46788999999999999999998 799876 7788999887543
No 216
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=81.26 E-value=7 Score=44.73 Aligned_cols=41 Identities=12% Similarity=0.323 Sum_probs=31.6
Q ss_pred CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCC
Q 017982 200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGI 249 (363)
Q Consensus 200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi 249 (363)
..+.|++.+++++|+ +.|+++.++|... ...+..+.+.+|+
T Consensus 567 Dplr~~v~~aI~~l~-~~Gi~v~~~TGd~--------~~ta~~ia~~~gi 607 (997)
T TIGR01106 567 DPPRAAVPDAVGKCR-SAGIKVIMVTGDH--------PITAKAIAKGVGI 607 (997)
T ss_pred CCChHHHHHHHHHHH-HCCCeEEEECCCC--------HHHHHHHHHHcCC
Confidence 356889999999998 6899999999775 2445566666655
No 217
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=81.10 E-value=2 Score=40.09 Aligned_cols=42 Identities=17% Similarity=0.118 Sum_probs=25.7
Q ss_pred EEcCCceeecCCC----CCcchhHHHHHHHHHHhCCCeEEEEeCCC
Q 017982 187 VFDKDNTLTAPYS----LTLWGPLSSSIEQCKSVFGHDIAVFSNSA 228 (363)
Q Consensus 187 V~DlDnTL~~~~~----~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~ 228 (363)
++|.|+||..... ..+.+++.+.|++|.+..+..++|+|..+
T Consensus 1 ~lDyDGTL~p~~~~p~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~ 46 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDPDAAVPPPELRELLRALAADPNNTVAIVSGRS 46 (235)
T ss_dssp EEE-TTTSS---S-GGG----HHHHHHHHHHHHHSE--EEEE-SS-
T ss_pred CcccCCccCCCCCCccccCCCHHHHHHHHHHhccCCCEEEEEEeCC
Confidence 5899999986332 35678999999999865544699999885
No 218
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=78.66 E-value=1.7 Score=41.17 Aligned_cols=34 Identities=18% Similarity=0.213 Sum_probs=31.3
Q ss_pred hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCC
Q 017982 262 TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGF 296 (363)
Q Consensus 262 ~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi 296 (363)
+++.+++.+|+++++++.|||.. .|+.+=+.+|.
T Consensus 192 al~~l~~~~gi~~~~v~afGD~~-NDi~Ml~~ag~ 225 (272)
T PRK15126 192 ALAVLSQHLGLSLADCMAFGDAM-NDREMLGSVGR 225 (272)
T ss_pred HHHHHHHHhCCCHHHeEEecCCH-HHHHHHHHcCC
Confidence 46889999999999999999998 89999999986
No 219
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=78.30 E-value=4.3 Score=38.62 Aligned_cols=42 Identities=19% Similarity=0.184 Sum_probs=33.5
Q ss_pred CEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCC
Q 017982 184 KGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSA 228 (363)
Q Consensus 184 kaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~ 228 (363)
..++||+|+||+. .+....|++.+.|+.|++ -..+++|-.++
T Consensus 12 ~l~lfdvdgtLt~-~r~~~~~e~~~~l~~lr~--~v~ig~VggsD 53 (252)
T KOG3189|consen 12 TLCLFDVDGTLTP-PRQKVTPEMLEFLQKLRK--KVTIGFVGGSD 53 (252)
T ss_pred eEEEEecCCcccc-ccccCCHHHHHHHHHHhh--heEEEEeecHH
Confidence 4678999999986 667789999999999985 34788876664
No 220
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=77.01 E-value=14 Score=37.44 Aligned_cols=116 Identities=19% Similarity=0.211 Sum_probs=68.5
Q ss_pred HcCCCEEEEcCCceeec-----------------CCCCCcchhHHHHHHHHHHhCC-CeEEEEeCCCCCCCCCccHHHHH
Q 017982 180 RRGFKGVVFDKDNTLTA-----------------PYSLTLWGPLSSSIEQCKSVFG-HDIAVFSNSAGLYEYDNDASKAR 241 (363)
Q Consensus 180 ~~GIkaVV~DlDnTL~~-----------------~~~~~~~p~v~e~L~~Lk~~~G-ikl~IVSN~~g~~~~dp~~~~a~ 241 (363)
.+|| ++|-|+|.|+.. .....++|++-.|.+.|.+ .| ..++-|||++= . ......
T Consensus 159 ~a~i-giISDiDDTV~~T~V~~~~r~~~~s~~l~~~tr~~ipGV~~~yr~l~~-~~~apvfYvSnSPw----~-~f~~L~ 231 (373)
T COG4850 159 RAGI-GIISDIDDTVKVTGVTEGPRKAGRSLLLHALTRQVIPGVSAWYRALTN-LGDAPVFYVSNSPW----Q-LFPTLQ 231 (373)
T ss_pred ccce-eeeeccccceEecccccchHHHHHHhhhcccccCCCCCHHHHHHHHHh-cCCCCeEEecCChh----H-hHHHHH
Confidence 3455 457899999853 1123578999999999984 55 68999999961 1 123333
Q ss_pred HHHHHhCCeE--------------EE--cccCCCchhHHHHHHHhCCCCCcEEEEccCCcccHHHHH------HcCCeEE
Q 017982 242 KLEGKIGIKV--------------IR--HRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGN------RNGFLTI 299 (363)
Q Consensus 242 ~i~~~LGi~~--------------I~--~~~kKP~p~~~~alk~lgl~pee~vmVGDrL~TDI~~A~------raGi~TI 299 (363)
.+...-++|. +. .+.+|-. .+..+++. ....+.+.|||+=..|.+.=- -.-+..|
T Consensus 232 efi~~~~~P~GPl~L~~~g~~~~~i~~sga~rK~~-~l~nil~~--~p~~kfvLVGDsGE~DpeIYae~v~~fP~RIl~I 308 (373)
T COG4850 232 EFITNRNFPYGPLLLRRWGGVLDNIIESGAARKGQ-SLRNILRR--YPDRKFVLVGDSGEHDPEIYAEMVRCFPNRILGI 308 (373)
T ss_pred HHHhcCCCCCCchhHhhcCCcccccccchhhhccc-HHHHHHHh--CCCceEEEecCCCCcCHHHHHHHHHhCccceeeE
Confidence 4443333432 11 1222211 23335554 345689999999888865421 1245577
Q ss_pred EEcCCC
Q 017982 300 LTEPLS 305 (363)
Q Consensus 300 lV~p~~ 305 (363)
+++...
T Consensus 309 ~IRdvs 314 (373)
T COG4850 309 YIRDVS 314 (373)
T ss_pred eeeecc
Confidence 877554
No 221
>TIGR03365 Bsubt_queE 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. This uncharacterized enzyme, designated QueE, participates in the biosynthesis, from GTP, of 7-cyano-7-deazaguanosine, also called preQ0 because in many species it is a precursor of queuosine. In most Archaea, it is instead the precursor of a different tRNA modified base, archaeosine.
Probab=73.95 E-value=21 Score=33.89 Aligned_cols=98 Identities=15% Similarity=0.143 Sum_probs=56.4
Q ss_pred eecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEcccCCCch-------hHHHH
Q 017982 194 LTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAG-------TAEEI 266 (363)
Q Consensus 194 L~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~~~kKP~p-------~~~~a 266 (363)
|+. ...-+.+++.+.++.++ +.|+.+.|.||..- + . ..+..++ .+....+-|+. ....+
T Consensus 78 lTG-GEPll~~~l~~li~~l~-~~g~~v~leTNGtl-----~--~---~~l~~~d--~v~vs~K~~~sg~~~~~~~~~~~ 143 (238)
T TIGR03365 78 LSG-GNPALQKPLGELIDLGK-AKGYRFALETQGSV-----W--Q---DWFRDLD--DLTLSPKPPSSGMETDWQALDDC 143 (238)
T ss_pred EeC-CchhhhHhHHHHHHHHH-HCCCCEEEECCCCC-----c--H---HHHhhCC--EEEEeCCCCCCCCCCcHHHHHHH
Confidence 554 55556688999999998 57999999999962 1 1 1233344 22222222221 12334
Q ss_pred HHHhCC-CCCc-EEEEccCCcccHHHHHHcCCe----EEEEcCCCCC
Q 017982 267 EKHFGC-QSSQ-LIMVGDRPFTDIVYGNRNGFL----TILTEPLSLA 307 (363)
Q Consensus 267 lk~lgl-~pee-~vmVGDrL~TDI~~A~raGi~----TIlV~p~~~~ 307 (363)
++.+.- ...+ =++|+|.. |+..+...+.. .+++.|+...
T Consensus 144 ik~l~~~~~~~vK~Vv~~~~--d~~~a~~~~~~~~~~~~~l~P~~~~ 188 (238)
T TIGR03365 144 IERLDDGPQTSLKVVVFDDA--DYAYAKEVHARYPDLPFYLQPGNHT 188 (238)
T ss_pred HHHhhhcCceEEEEEECCcc--cHHHHHHHHHhcCCCCEEECCCCCC
Confidence 444431 1222 23678764 78888877642 4677787754
No 222
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=73.09 E-value=4.1 Score=35.91 Aligned_cols=34 Identities=18% Similarity=0.345 Sum_probs=22.1
Q ss_pred CCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCe
Q 017982 182 GFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHD 220 (363)
Q Consensus 182 GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gik 220 (363)
.+++|+||+||||... .+...+++.++.++.|+.
T Consensus 4 ~~~~viFD~DGTLiDs-----~~~~~~a~~~~~~~~g~~ 37 (188)
T PRK10725 4 RYAGLIFDMDGTILDT-----EPTHRKAWREVLGRYGLQ 37 (188)
T ss_pred cceEEEEcCCCcCccC-----HHHHHHHHHHHHHHcCCC
Confidence 5789999999999752 223344555554456653
No 223
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=72.44 E-value=4 Score=38.84 Aligned_cols=39 Identities=13% Similarity=0.230 Sum_probs=33.3
Q ss_pred hHHHHHHHhCC---CCCcEEEEccCCcccHHHHHHcCCeEEEEc
Q 017982 262 TAEEIEKHFGC---QSSQLIMVGDRPFTDIVYGNRNGFLTILTE 302 (363)
Q Consensus 262 ~~~~alk~lgl---~pee~vmVGDrL~TDI~~A~raGi~TIlV~ 302 (363)
+++.+++.+|+ ++++++.|||+. .|+.+=+.+|. +|.+.
T Consensus 191 al~~l~~~lgi~~~~~~~viafGDs~-NDi~Ml~~ag~-gvAM~ 232 (271)
T PRK03669 191 AANWLIATYQQLSGTRPTTLGLGDGP-NDAPLLDVMDY-AVVVK 232 (271)
T ss_pred HHHHHHHHHHhhcCCCceEEEEcCCH-HHHHHHHhCCE-EEEec
Confidence 46889999999 999999999998 89999999885 44443
No 224
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=72.13 E-value=4.7 Score=36.51 Aligned_cols=14 Identities=43% Similarity=0.714 Sum_probs=12.6
Q ss_pred CCEEEEcCCceeec
Q 017982 183 FKGVVFDKDNTLTA 196 (363)
Q Consensus 183 IkaVV~DlDnTL~~ 196 (363)
+++|+||+||||..
T Consensus 2 ~~~viFDlDGTL~d 15 (221)
T TIGR02253 2 IKAIFFDLDDTLID 15 (221)
T ss_pred ceEEEEeCCCCCcC
Confidence 67999999999975
No 225
>PRK11587 putative phosphatase; Provisional
Probab=70.76 E-value=5 Score=36.75 Aligned_cols=15 Identities=47% Similarity=0.685 Sum_probs=13.2
Q ss_pred CCCEEEEcCCceeec
Q 017982 182 GFKGVVFDKDNTLTA 196 (363)
Q Consensus 182 GIkaVV~DlDnTL~~ 196 (363)
.+++|+||+|+||..
T Consensus 2 ~~k~viFDlDGTL~D 16 (218)
T PRK11587 2 RCKGFLFDLDGTLVD 16 (218)
T ss_pred CCCEEEEcCCCCcCc
Confidence 478999999999975
No 226
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=70.33 E-value=5 Score=38.56 Aligned_cols=17 Identities=24% Similarity=0.499 Sum_probs=14.9
Q ss_pred HcCCCEEEEcCCceeec
Q 017982 180 RRGFKGVVFDKDNTLTA 196 (363)
Q Consensus 180 ~~GIkaVV~DlDnTL~~ 196 (363)
-.|+++|+||+|+||..
T Consensus 21 ~~~~k~vIFDlDGTLvD 37 (260)
T PLN03243 21 GCGWLGVVLEWEGVIVE 37 (260)
T ss_pred cCCceEEEEeCCCceeC
Confidence 35799999999999985
No 227
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=70.18 E-value=4.8 Score=37.82 Aligned_cols=35 Identities=23% Similarity=0.347 Sum_probs=31.2
Q ss_pred hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCe
Q 017982 262 TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFL 297 (363)
Q Consensus 262 ~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~ 297 (363)
++..+++++|+++++++.+||+. .|+.+=..+|..
T Consensus 193 al~~l~~~lgi~~~~v~afGD~~-ND~~Ml~~ag~g 227 (264)
T COG0561 193 ALQRLAKLLGIKLEEVIAFGDST-NDIEMLEVAGLG 227 (264)
T ss_pred HHHHHHHHhCCCHHHeEEeCCcc-ccHHHHHhcCee
Confidence 35788899999999999999998 899999988864
No 228
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=69.37 E-value=6.3 Score=36.90 Aligned_cols=34 Identities=9% Similarity=0.085 Sum_probs=28.0
Q ss_pred HHHHHHHhCC--CCCcEEEEccCCcccHHHHHHcCCe
Q 017982 263 AEEIEKHFGC--QSSQLIMVGDRPFTDIVYGNRNGFL 297 (363)
Q Consensus 263 ~~~alk~lgl--~pee~vmVGDrL~TDI~~A~raGi~ 297 (363)
...+++.+++ +++++++|||+. +|+.+-..+|+.
T Consensus 186 l~~l~~~~~~~~~~~~~i~~GD~~-nD~~ml~~ag~~ 221 (225)
T TIGR02461 186 IKRLLDLYKLRPGAIESVGLGDSE-NDFPMFEVVDLA 221 (225)
T ss_pred HHHHHHHhccccCcccEEEEcCCH-HHHHHHHhCCCc
Confidence 4566667755 777999999999 899999999974
No 229
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=68.37 E-value=17 Score=32.84 Aligned_cols=104 Identities=18% Similarity=0.230 Sum_probs=56.3
Q ss_pred CCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCC-e---EEEcccCCCchhHHHHHHHhCCC
Q 017982 198 YSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGI-K---VIRHRVKKPAGTAEEIEKHFGCQ 273 (363)
Q Consensus 198 ~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi-~---~I~~~~kKP~p~~~~alk~lgl~ 273 (363)
....+.|++.++|++|. +.|+.++++|..+...+........+-+.+.++- + ++.. ..|- .++.+
T Consensus 70 ~~l~p~~gA~e~l~~L~-~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~i~~~~~~~~-~~K~---------~v~~D 138 (191)
T PF06941_consen 70 SNLPPIPGAVEALKKLR-DKGHEIVIITARPPEFPDHSAEEKREWLERHFPFIPYDNLIFT-GDKT---------LVGGD 138 (191)
T ss_dssp TT--B-TTHHHHHHHHH-TSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTHHHHCCEEEE-SSGG---------GC--S
T ss_pred cCCCccHHHHHHHHHHH-HcCCcEEEEEecCccccchHHHHHHHHHHHHcCCCchheEEEe-cCCC---------eEecc
Confidence 45678899999999998 5787777777765321100112344445555552 2 3322 1221 12222
Q ss_pred CCcEEEEccCCcccHHHHHHcCCeEEEEc-CCCCCCchhHHHHHHH
Q 017982 274 SSQLIMVGDRPFTDIVYGNRNGFLTILTE-PLSLAEEPFIVRQVRK 318 (363)
Q Consensus 274 pee~vmVGDrL~TDI~~A~raGi~TIlV~-p~~~~~e~~~t~~~R~ 318 (363)
++|-|+. .-+..+...|+.+|+.. |.+.. ....+|+.-+
T Consensus 139 ----vlIDD~~-~n~~~~~~~g~~~iLfd~p~Nr~-~~~~~Rv~~W 178 (191)
T PF06941_consen 139 ----VLIDDRP-HNLEQFANAGIPVILFDQPYNRD-ESNFPRVNNW 178 (191)
T ss_dssp ----EEEESSS-HHHSS-SSESSEEEEE--GGGTT---TSEEE-ST
T ss_pred ----EEecCCh-HHHHhccCCCceEEEEcCCCCCC-CCCCccCCCH
Confidence 8999999 46888888999999997 55433 3344443333
No 230
>PLN02887 hydrolase family protein
Probab=67.93 E-value=5.6 Score=42.97 Aligned_cols=35 Identities=17% Similarity=0.314 Sum_probs=32.0
Q ss_pred hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCe
Q 017982 262 TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFL 297 (363)
Q Consensus 262 ~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~ 297 (363)
++..+++++|+++++++.|||.. .||.+-..+|..
T Consensus 511 ALk~L~e~lGI~~eeviAFGDs~-NDIeMLe~AG~g 545 (580)
T PLN02887 511 GVKMLLNHLGVSPDEIMAIGDGE-NDIEMLQLASLG 545 (580)
T ss_pred HHHHHHHHcCCCHHHEEEEecch-hhHHHHHHCCCE
Confidence 46889999999999999999998 899999999964
No 231
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=67.26 E-value=7.2 Score=35.40 Aligned_cols=14 Identities=29% Similarity=0.235 Sum_probs=12.5
Q ss_pred CCEEEEcCCceeec
Q 017982 183 FKGVVFDKDNTLTA 196 (363)
Q Consensus 183 IkaVV~DlDnTL~~ 196 (363)
|++|+||+|+||..
T Consensus 1 ~k~iiFD~DGTL~d 14 (220)
T TIGR03351 1 ISLVVLDMAGTTVD 14 (220)
T ss_pred CcEEEEecCCCeec
Confidence 58899999999985
No 232
>PRK01713 ornithine carbamoyltransferase; Provisional
Probab=66.76 E-value=1.1e+02 Score=30.68 Aligned_cols=114 Identities=11% Similarity=0.129 Sum_probs=73.1
Q ss_pred HHHHcCCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEccc
Q 017982 177 ELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRV 256 (363)
Q Consensus 177 ~L~~~GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~~~ 256 (363)
..++.|-.++.+|.+..= ..+ -+.+.+..+.|. .+ ..++|+=... ...++.+.+..++|+|-...
T Consensus 67 A~~~LGg~~i~l~~~~ss--~~k---gEsl~DTarvls-~y-~D~iv~R~~~--------~~~~~~~a~~~~vPVINa~~ 131 (334)
T PRK01713 67 AAYDQGAQVTYIDPNSSQ--IGH---KESMKDTARVLG-RM-YDAIEYRGFK--------QSIVNELAEYAGVPVFNGLT 131 (334)
T ss_pred HHHHcCCeEEEcCCcccc--CCC---CcCHHHHHHHHH-Hh-CCEEEEEcCc--------hHHHHHHHHhCCCCEEECCC
Confidence 355779998888665432 122 244555666665 34 3556665442 35677888888999986433
Q ss_pred CC--CchhH---HHHHHHhC--CCCCcEEEEccC----CcccHHHHHHcCCeEEEEcCCC
Q 017982 257 KK--PAGTA---EEIEKHFG--CQSSQLIMVGDR----PFTDIVYGNRNGFLTILTEPLS 305 (363)
Q Consensus 257 kK--P~p~~---~~alk~lg--l~pee~vmVGDr----L~TDI~~A~raGi~TIlV~p~~ 305 (363)
.. |-..+ ..+.+.+| ++.-.+++|||- ....+.++...|+...++.|-.
T Consensus 132 ~~~HPtQaL~Dl~Ti~e~~g~~l~gl~ia~vGD~~~~v~~Sl~~~~~~~g~~v~~~~P~~ 191 (334)
T PRK01713 132 DEFHPTQMLADVLTMIENCDKPLSEISYVYIGDARNNMGNSLLLIGAKLGMDVRICAPKA 191 (334)
T ss_pred CCCChHHHHHHHHHHHHHcCCCcCCcEEEEECCCccCHHHHHHHHHHHcCCEEEEECCch
Confidence 33 33333 34556665 666789999996 3346788889999988887653
No 233
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=66.03 E-value=25 Score=40.60 Aligned_cols=41 Identities=15% Similarity=0.088 Sum_probs=31.8
Q ss_pred CCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCC
Q 017982 200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGI 249 (363)
Q Consensus 200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi 249 (363)
..+.|++.+++++|+ +.|+++.++|.-. ...+..+++.+|+
T Consensus 655 d~lr~~~~~~I~~l~-~agi~v~miTGD~--------~~TA~~iA~~~gi 695 (1054)
T TIGR01657 655 NPLKPDTKEVIKELK-RASIRTVMITGDN--------PLTAVHVARECGI 695 (1054)
T ss_pred cCCCccHHHHHHHHH-HCCCeEEEECCCC--------HHHHHHHHHHcCC
Confidence 357899999999998 6899999999764 2455566666665
No 234
>PLN02382 probable sucrose-phosphatase
Probab=66.02 E-value=7.6 Score=40.00 Aligned_cols=40 Identities=13% Similarity=0.163 Sum_probs=35.0
Q ss_pred hHHHHHHHh---CCCCCcEEEEccCCcccHHHHHHcCCeEEEEc
Q 017982 262 TAEEIEKHF---GCQSSQLIMVGDRPFTDIVYGNRNGFLTILTE 302 (363)
Q Consensus 262 ~~~~alk~l---gl~pee~vmVGDrL~TDI~~A~raGi~TIlV~ 302 (363)
++..+++++ |+++++++.+||+. +|+.+=..+|..+|.|.
T Consensus 179 Al~~L~~~~~~~gi~~~~~iafGDs~-NDleMl~~ag~~gvam~ 221 (413)
T PLN02382 179 ALAYLLKKLKAEGKAPVNTLVCGDSG-NDAELFSVPDVYGVMVS 221 (413)
T ss_pred HHHHHHHHhhhcCCChhcEEEEeCCH-HHHHHHhcCCCCEEEEc
Confidence 457888888 99999999999998 89999999997777774
No 235
>PLN02382 probable sucrose-phosphatase
Probab=65.61 E-value=13 Score=38.29 Aligned_cols=56 Identities=13% Similarity=0.027 Sum_probs=36.2
Q ss_pred EEEEcCCceeecCCC-CCcc-hhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCC
Q 017982 185 GVVFDKDNTLTAPYS-LTLW-GPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGI 249 (363)
Q Consensus 185 aVV~DlDnTL~~~~~-~~~~-p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi 249 (363)
.|+.|+|+||..... ..+. .....+++++. +.|+.++++|... -..+..+.+.+++
T Consensus 11 lI~sDLDGTLL~~~~~~~~s~~~~~~l~~~~~-~~gi~fv~aTGR~--------~~~~~~l~~~~~l 68 (413)
T PLN02382 11 MIVSDLDHTMVDHHDPENLSLLRFNALWEAEY-RHDSLLVFSTGRS--------PTLYKELRKEKPL 68 (413)
T ss_pred EEEEcCCCcCcCCCCccchhHHHHHHHHHHhh-cCCeeEEEEcCCC--------HHHHHHHHHhCCC
Confidence 567799999985322 1333 33444447776 5788888888775 2455666666654
No 236
>PRK03515 ornithine carbamoyltransferase subunit I; Provisional
Probab=65.41 E-value=1.3e+02 Score=30.28 Aligned_cols=114 Identities=11% Similarity=0.051 Sum_probs=74.2
Q ss_pred HHHHcCCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEccc
Q 017982 177 ELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRV 256 (363)
Q Consensus 177 ~L~~~GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~~~ 256 (363)
...+.|-+++.+|.+.+=. .. -+.+.+..+.|. .+ ..++++=... ...++.+.+..++|+|-...
T Consensus 66 A~~~LGg~~i~l~~~~s~~--~k---gEsl~Dtarvls-~y-~D~Iv~R~~~--------~~~~~~~a~~~~vPVINa~~ 130 (336)
T PRK03515 66 AAYDQGARVTYLGPSGSQI--GH---KESIKDTARVLG-RM-YDGIQYRGYG--------QEIVETLAEYAGVPVWNGLT 130 (336)
T ss_pred HHHHcCCcEEEeCCccccC--CC---CCCHHHHHHHHH-Hh-CcEEEEEeCC--------hHHHHHHHHhCCCCEEECCC
Confidence 3457799999887755322 22 345566666665 34 3555555442 35677888888999986433
Q ss_pred CCCch--hH---HHHHHHhC---CCCCcEEEEccC----CcccHHHHHHcCCeEEEEcCCC
Q 017982 257 KKPAG--TA---EEIEKHFG---CQSSQLIMVGDR----PFTDIVYGNRNGFLTILTEPLS 305 (363)
Q Consensus 257 kKP~p--~~---~~alk~lg---l~pee~vmVGDr----L~TDI~~A~raGi~TIlV~p~~ 305 (363)
..-+| .+ ..+.+++| ++.-.+++|||- ...-+.++...|+...++.|-.
T Consensus 131 ~~~HPtQaLaDl~Ti~e~~g~~~l~g~~ia~vGD~~~~v~~Sl~~~~~~~g~~v~~~~P~~ 191 (336)
T PRK03515 131 NEFHPTQLLADLLTMQEHLPGKAFNEMTLAYAGDARNNMGNSLLEAAALTGLDLRLVAPKA 191 (336)
T ss_pred CCCChHHHHHHHHHHHHHhCCCCcCCCEEEEeCCCcCcHHHHHHHHHHHcCCEEEEECCch
Confidence 34444 33 34566664 666789999995 3345778888999988888644
No 237
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=64.72 E-value=8.3 Score=33.69 Aligned_cols=33 Identities=18% Similarity=0.379 Sum_probs=20.5
Q ss_pred CCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCe
Q 017982 183 FKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHD 220 (363)
Q Consensus 183 IkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gik 220 (363)
+++|+||+|+||.... +....+++++.++.|..
T Consensus 1 ~~~iiFD~DGTL~ds~-----~~~~~~~~~~~~~~g~~ 33 (185)
T TIGR02009 1 YKAVIFDMDGVIVDTA-----PLHAQAWKHLADKYGIE 33 (185)
T ss_pred CCeEEEcCCCcccCCh-----HHHHHHHHHHHHHcCCC
Confidence 5789999999997522 22333444444456654
No 238
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=63.97 E-value=7 Score=35.01 Aligned_cols=13 Identities=46% Similarity=0.470 Sum_probs=11.6
Q ss_pred CEEEEcCCceeec
Q 017982 184 KGVVFDKDNTLTA 196 (363)
Q Consensus 184 kaVV~DlDnTL~~ 196 (363)
++|+||+|+||..
T Consensus 1 k~viFDlDGTL~d 13 (203)
T TIGR02252 1 KLITFDAVGTLLA 13 (203)
T ss_pred CeEEEecCCceee
Confidence 5799999999985
No 239
>PRK00856 pyrB aspartate carbamoyltransferase catalytic subunit; Provisional
Probab=63.12 E-value=1.6e+02 Score=29.16 Aligned_cols=115 Identities=22% Similarity=0.262 Sum_probs=75.0
Q ss_pred HHHHcCCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEccc
Q 017982 177 ELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRV 256 (363)
Q Consensus 177 ~L~~~GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~~~ 256 (363)
...+.|-+++.++-..+= ... -+.+.+..+-|. .+|..++++=-.. ...++.+.+..++|+|-...
T Consensus 66 A~~~LGg~~i~l~~~~~~--~~k---gEs~~Dta~vls-~y~~D~iv~R~~~--------~~~~~~~a~~~~vPVINa~~ 131 (305)
T PRK00856 66 AAKRLGADVINFSASTSS--VSK---GETLADTIRTLS-AMGADAIVIRHPQ--------SGAARLLAESSDVPVINAGD 131 (305)
T ss_pred HHHHcCCcEEEeCCCccc--CCC---CcCHHHHHHHHH-hcCCCEEEEeCCC--------hHHHHHHHHHCCCCEEECCC
Confidence 455779999988765431 122 345566676665 5656666665442 35677888888999997533
Q ss_pred C---CCchhH---HHHHHHhC-CCCCcEEEEccCC-----cccHHHHHHcCCeEEEEcCCC
Q 017982 257 K---KPAGTA---EEIEKHFG-CQSSQLIMVGDRP-----FTDIVYGNRNGFLTILTEPLS 305 (363)
Q Consensus 257 k---KP~p~~---~~alk~lg-l~pee~vmVGDrL-----~TDI~~A~raGi~TIlV~p~~ 305 (363)
+ -|-..+ ..+.+.+| ++.-.+++|||-. ..=+.++...|+....+.|-.
T Consensus 132 g~~~HPtQ~LaDl~Ti~e~~G~l~g~kv~~vGD~~~~~v~~Sl~~~~~~~g~~~~~~~P~~ 192 (305)
T PRK00856 132 GSHQHPTQALLDLLTIREEFGRLEGLKVAIVGDIKHSRVARSNIQALTRLGAEVRLIAPPT 192 (305)
T ss_pred CCCCCcHHHHHHHHHHHHHhCCCCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEECCcc
Confidence 2 344433 35666676 6667999999953 233677788899877777543
No 240
>PRK12562 ornithine carbamoyltransferase subunit F; Provisional
Probab=62.94 E-value=1.5e+02 Score=30.03 Aligned_cols=114 Identities=11% Similarity=0.067 Sum_probs=72.7
Q ss_pred HHHHcCCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEccc
Q 017982 177 ELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRV 256 (363)
Q Consensus 177 ~L~~~GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~~~ 256 (363)
...+.|-.++.+|..+.=. .. -+.+.+..+.|. .+. .++|+=... ...++.+.+..++|+|-...
T Consensus 66 A~~~LGg~~i~l~~~~s~~--~k---gEsl~Dtarvls-~y~-D~iviR~~~--------~~~~~~~a~~~~vPVINa~~ 130 (334)
T PRK12562 66 AAYDQGARVTYLGPSGSQI--GH---KESIKDTARVLG-RMY-DGIQYRGHG--------QEVVETLAEYAGVPVWNGLT 130 (334)
T ss_pred HHHHcCCeEEEeCCccccC--CC---CcCHHHHHHHHH-HhC-CEEEEECCc--------hHHHHHHHHhCCCCEEECCC
Confidence 3457799999887654311 22 344556666665 343 444444332 35678888889999986433
Q ss_pred CCCch--hH---HHHHHHhC---CCCCcEEEEccC----CcccHHHHHHcCCeEEEEcCCC
Q 017982 257 KKPAG--TA---EEIEKHFG---CQSSQLIMVGDR----PFTDIVYGNRNGFLTILTEPLS 305 (363)
Q Consensus 257 kKP~p--~~---~~alk~lg---l~pee~vmVGDr----L~TDI~~A~raGi~TIlV~p~~ 305 (363)
..-+| .+ ..+.+++| ++.-.+++|||- ...-+.++...|+...++.|-.
T Consensus 131 ~~~HPtQaLaDl~Ti~e~~g~~~l~gl~va~vGD~~~~v~~S~~~~~~~~G~~v~~~~P~~ 191 (334)
T PRK12562 131 NEFHPTQLLADLLTMQEHLPGKAFNEMTLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQA 191 (334)
T ss_pred CCCChHHHHHHHHHHHHHhCCCCcCCcEEEEECCCCCCHHHHHHHHHHHcCCEEEEECCcc
Confidence 33334 33 34556774 666789999995 3345777788999988887654
No 241
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=62.91 E-value=8.6 Score=35.63 Aligned_cols=15 Identities=40% Similarity=0.423 Sum_probs=12.9
Q ss_pred CCCEEEEcCCceeec
Q 017982 182 GFKGVVFDKDNTLTA 196 (363)
Q Consensus 182 GIkaVV~DlDnTL~~ 196 (363)
-+++|+||+|+||..
T Consensus 11 ~~k~viFD~DGTL~D 25 (229)
T PRK13226 11 FPRAVLFDLDGTLLD 25 (229)
T ss_pred cCCEEEEcCcCcccc
Confidence 357999999999985
No 242
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=62.16 E-value=9.3 Score=34.40 Aligned_cols=16 Identities=31% Similarity=0.532 Sum_probs=13.5
Q ss_pred CCEEEEcCCceeecCC
Q 017982 183 FKGVVFDKDNTLTAPY 198 (363)
Q Consensus 183 IkaVV~DlDnTL~~~~ 198 (363)
|++|+||+|+||..+.
T Consensus 1 ~k~viFD~DGTL~d~~ 16 (224)
T TIGR02254 1 YKTLLFDLDDTILDFQ 16 (224)
T ss_pred CCEEEEcCcCcccccc
Confidence 6899999999998643
No 243
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=61.33 E-value=9.4 Score=34.73 Aligned_cols=15 Identities=40% Similarity=0.565 Sum_probs=13.4
Q ss_pred CCCEEEEcCCceeec
Q 017982 182 GFKGVVFDKDNTLTA 196 (363)
Q Consensus 182 GIkaVV~DlDnTL~~ 196 (363)
.+++++||+||||..
T Consensus 3 ~~~~viFD~DGTL~d 17 (221)
T PRK10563 3 QIEAVFFDCDGTLVD 17 (221)
T ss_pred CCCEEEECCCCCCCC
Confidence 589999999999975
No 244
>TIGR01658 EYA-cons_domain eyes absent protein conserved domain. This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences.
Probab=61.28 E-value=23 Score=34.66 Aligned_cols=77 Identities=13% Similarity=0.085 Sum_probs=52.0
Q ss_pred EEEEeCCCCCCCCCccHHHHHHHHHHhCCeE----EE--cccCCCchhHHHHHHHhCCCCCcEEEEccCCcccHHHHHHc
Q 017982 221 IAVFSNSAGLYEYDNDASKARKLEGKIGIKV----IR--HRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRN 294 (363)
Q Consensus 221 l~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~----I~--~~~kKP~p~~~~alk~lgl~pee~vmVGDrL~TDI~~A~ra 294 (363)
-++||+..- ..+.++-++-.||--+ |+ ...+|.. .|+.|.+++|-+.-.-++|||.. +--.+|+.+
T Consensus 178 NvLVTs~qL------VPaLaKcLLy~L~~~f~ieNIYSa~kvGK~~-cFe~I~~Rfg~p~~~f~~IGDG~-eEe~aAk~l 249 (274)
T TIGR01658 178 NVLVTSGQL------IPSLAKCLLFRLDTIFRIENVYSSIKVGKLQ-CFKWIKERFGHPKVRFCAIGDGW-EECTAAQAM 249 (274)
T ss_pred EEEEEcCcc------HHHHHHHHHhccCCccccccccchhhcchHH-HHHHHHHHhCCCCceEEEeCCCh-hHHHHHHhc
Confidence 456666631 1245555555555221 22 2345544 48999999999888999999998 567999999
Q ss_pred CCeEEEEcCCC
Q 017982 295 GFLTILTEPLS 305 (363)
Q Consensus 295 Gi~TIlV~p~~ 305 (363)
++..+-|....
T Consensus 250 ~wPFw~I~~h~ 260 (274)
T TIGR01658 250 NWPFVKIDLHP 260 (274)
T ss_pred CCCeEEeecCC
Confidence 99877776443
No 245
>TIGR02329 propionate_PrpR propionate catabolism operon regulatory protein PrpR. At least five distinct pathways exists for the catabolism of propionate by way of propionyl-CoA. Members of this family represent the transcriptional regulatory protein PrpR, whose gene is found in most cases divergently transcribed from an operon for the methylcitric acid cycle of propionate catabolism. 2-methylcitric acid, a catabolite by this pathway, is a coactivator of PrpR.
Probab=60.77 E-value=54 Score=35.09 Aligned_cols=85 Identities=8% Similarity=0.174 Sum_probs=54.4
Q ss_pred hHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEcccCCCchh--HHHHHHHhCCCCCcEEEEcc
Q 017982 205 PLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAGT--AEEIEKHFGCQSSQLIMVGD 282 (363)
Q Consensus 205 ~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~~~kKP~p~--~~~alk~lgl~pee~vmVGD 282 (363)
++..+|..++ .++-+++||+-..- -..++.+...++++........+... ...-++.-|+ -++|||
T Consensus 85 Dil~al~~a~-~~~~~ia~vg~~~~-------~~~~~~~~~ll~~~i~~~~~~~~~e~~~~~~~l~~~G~----~~viG~ 152 (526)
T TIGR02329 85 DVMQALARAR-RIASSIGVVTHQDT-------PPALRRFQAAFNLDIVQRSYVTEEDARSCVNDLRARGI----GAVVGA 152 (526)
T ss_pred hHHHHHHHHH-hcCCcEEEEecCcc-------cHHHHHHHHHhCCceEEEEecCHHHHHHHHHHHHHCCC----CEEECC
Confidence 4666676666 46668999987642 24567777888887432222333321 1122333454 568899
Q ss_pred CCcccHHHHHHcCCeEEEEcC
Q 017982 283 RPFTDIVYGNRNGFLTILTEP 303 (363)
Q Consensus 283 rL~TDI~~A~raGi~TIlV~p 303 (363)
.+ + ...|.++|+..|++..
T Consensus 153 ~~-~-~~~A~~~gl~~ili~s 171 (526)
T TIGR02329 153 GL-I-TDLAEQAGLHGVFLYS 171 (526)
T ss_pred hH-H-HHHHHHcCCceEEEec
Confidence 98 3 7788999999999976
No 246
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=60.75 E-value=6.5 Score=37.40 Aligned_cols=57 Identities=12% Similarity=0.019 Sum_probs=34.0
Q ss_pred CEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe
Q 017982 184 KGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK 250 (363)
Q Consensus 184 kaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~ 250 (363)
+.++.|+|+||+. ..........++++ .+...++.++++|... -..+..+++..+++
T Consensus 3 ~ll~sDlD~Tl~~-~~~~~~~~l~~~l~-~~~~~~~~~v~~TGRs--------~~~~~~~~~~~~l~ 59 (247)
T PF05116_consen 3 RLLASDLDGTLID-GDDEALARLEELLE-QQARPEILFVYVTGRS--------LESVLRLLREYNLP 59 (247)
T ss_dssp EEEEEETBTTTBH-CHHHHHHHHHHHHH-HHHCCGEEEEEE-SS---------HHHHHHHHHHCT-E
T ss_pred EEEEEECCCCCcC-CCHHHHHHHHHHHH-HhhCCCceEEEECCCC--------HHHHHHHHHhCCCC
Confidence 3578999999981 12223345555565 2224566778888774 36677777777775
No 247
>PHA02597 30.2 hypothetical protein; Provisional
Probab=60.36 E-value=5.1 Score=35.88 Aligned_cols=16 Identities=19% Similarity=0.063 Sum_probs=13.8
Q ss_pred CCEEEEcCCceeecCC
Q 017982 183 FKGVVFDKDNTLTAPY 198 (363)
Q Consensus 183 IkaVV~DlDnTL~~~~ 198 (363)
+++|+||+|+||..|.
T Consensus 2 ~k~viFDlDGTLiD~~ 17 (197)
T PHA02597 2 KPTILTDVDGVLLSWQ 17 (197)
T ss_pred CcEEEEecCCceEchh
Confidence 6899999999999743
No 248
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=60.15 E-value=9.6 Score=34.56 Aligned_cols=15 Identities=40% Similarity=0.558 Sum_probs=13.4
Q ss_pred CCCEEEEcCCceeec
Q 017982 182 GFKGVVFDKDNTLTA 196 (363)
Q Consensus 182 GIkaVV~DlDnTL~~ 196 (363)
.+++|+||+|+||..
T Consensus 2 ~~~~viFD~DGTL~d 16 (214)
T PRK13288 2 KINTVLFDLDGTLIN 16 (214)
T ss_pred CccEEEEeCCCcCcc
Confidence 578999999999975
No 249
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=59.72 E-value=9.1 Score=36.79 Aligned_cols=14 Identities=43% Similarity=0.487 Sum_probs=12.5
Q ss_pred CCEEEEcCCceeec
Q 017982 183 FKGVVFDKDNTLTA 196 (363)
Q Consensus 183 IkaVV~DlDnTL~~ 196 (363)
+++|+||+|+||..
T Consensus 13 ~k~viFDlDGTL~D 26 (272)
T PRK13223 13 PRLVMFDLDGTLVD 26 (272)
T ss_pred CCEEEEcCCCcccc
Confidence 67999999999974
No 250
>PLN02342 ornithine carbamoyltransferase
Probab=59.52 E-value=1.9e+02 Score=29.45 Aligned_cols=114 Identities=15% Similarity=0.123 Sum_probs=73.3
Q ss_pred HHHHcCCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEccc
Q 017982 177 ELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRV 256 (363)
Q Consensus 177 ~L~~~GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~~~ 256 (363)
..++.|-.++.+|.+.+=. .+ -+.+.+..+.|. .+ ..++|+=... ...++.+.+..++|+|-...
T Consensus 106 A~~~LGg~~i~l~~~~ss~--~k---GESl~DTarvLs-~y-~D~IviR~~~--------~~~~~~la~~~~vPVINA~~ 170 (348)
T PLN02342 106 GFFLLGGHALYLGPDDIQL--GK---REETRDIARVLS-RY-NDIIMARVFA--------HQDVLDLAEYSSVPVINGLT 170 (348)
T ss_pred HHHHcCCcEEEeCcccccC--CC---CcCHHHHHHHHH-Hh-CCEEEEeCCC--------hHHHHHHHHhCCCCEEECCC
Confidence 4557799999887655311 22 344566666665 45 3556655432 24567788888999986433
Q ss_pred CC--CchhH---HHHHHHhC-CCCCcEEEEcc---CCcccHHHHHHcCCeEEEEcCCC
Q 017982 257 KK--PAGTA---EEIEKHFG-CQSSQLIMVGD---RPFTDIVYGNRNGFLTILTEPLS 305 (363)
Q Consensus 257 kK--P~p~~---~~alk~lg-l~pee~vmVGD---rL~TDI~~A~raGi~TIlV~p~~ 305 (363)
.. |-..+ ..+.+++| ++--.+++||| -....+.++.+.|+...++.|-.
T Consensus 171 ~~~HPtQaLaDl~Ti~e~~G~l~glkva~vGD~~nva~Sli~~~~~~G~~v~~~~P~~ 228 (348)
T PLN02342 171 DYNHPCQIMADALTIIEHIGRLEGTKVVYVGDGNNIVHSWLLLAAVLPFHFVCACPKG 228 (348)
T ss_pred CCCChHHHHHHHHHHHHHhCCcCCCEEEEECCCchhHHHHHHHHHHcCCEEEEECCcc
Confidence 33 43333 34556676 66678999999 33345777888999988887654
No 251
>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3.1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm
Probab=59.21 E-value=1.1e+02 Score=30.05 Aligned_cols=88 Identities=10% Similarity=0.065 Sum_probs=58.5
Q ss_pred cchhHHHHHHHHHHhCC-----CeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeE---EE-cccCCCchhHHHHHHHhCC
Q 017982 202 LWGPLSSSIEQCKSVFG-----HDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV---IR-HRVKKPAGTAEEIEKHFGC 272 (363)
Q Consensus 202 ~~p~v~e~L~~Lk~~~G-----ikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~---I~-~~~kKP~p~~~~alk~lgl 272 (363)
++......|.+++++++ ++++|||-... |..+++-+-++..|+.+ .+ .+..| ..+|+.++-
T Consensus 165 P~~~fl~~L~~lQ~~~~~~~~piRtalVTAR~a-----pah~RvI~TLr~Wgv~vDEafFLgG~~K-----~~vL~~~~p 234 (264)
T PF06189_consen 165 PFKDFLKKLSKLQKKFPPENSPIRTALVTARSA-----PAHERVIRTLRSWGVRVDEAFFLGGLPK-----GPVLKAFRP 234 (264)
T ss_pred CHHHHHHHHHHHHHhcCCCCCceEEEEEEcCCC-----chhHHHHHHHHHcCCcHhHHHHhCCCch-----hHHHHhhCC
Confidence 34455666667765543 58999997753 44578888888888873 11 33434 235555542
Q ss_pred CCCcEEEEccCCcccHHHHHHcCCeEEEEcCCC
Q 017982 273 QSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLS 305 (363)
Q Consensus 273 ~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~ 305 (363)
=+++.|+. .-+..|. .++.+..|.-++
T Consensus 235 ----hIFFDDQ~-~H~~~a~-~~vps~hVP~gv 261 (264)
T PF06189_consen 235 ----HIFFDDQD-GHLESAS-KVVPSGHVPYGV 261 (264)
T ss_pred ----CEeecCch-hhhhHhh-cCCCEEeccCCc
Confidence 26889998 6788888 788899987554
No 252
>PRK04284 ornithine carbamoyltransferase; Provisional
Probab=57.83 E-value=2e+02 Score=28.90 Aligned_cols=114 Identities=11% Similarity=0.029 Sum_probs=73.9
Q ss_pred HHHHcCCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEccc
Q 017982 177 ELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRV 256 (363)
Q Consensus 177 ~L~~~GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~~~ 256 (363)
..++.|-.++.+|...+-. .+ -+.+.+..+.|. .+ ..++|+-... ...++.+.+..++|+|-...
T Consensus 66 A~~~LGg~~i~l~~~~ss~--~k---gEsl~DTarvls-~y-~D~iviR~~~--------~~~~~~~a~~s~vPVINa~~ 130 (332)
T PRK04284 66 AAYDQGAHVTYLGPTGSQM--GK---KESTKDTARVLG-GM-YDGIEYRGFS--------QRTVETLAEYSGVPVWNGLT 130 (332)
T ss_pred HHHHcCCeEEEcCCccccC--CC---CcCHHHHHHHHH-Hh-CCEEEEecCc--------hHHHHHHHHhCCCCEEECCC
Confidence 3457799998887765422 12 344556666665 45 4666665443 35677888888999986433
Q ss_pred C--CCchhH---HHHHHH-hC-CCCCcEEEEccC----CcccHHHHHHcCCeEEEEcCCC
Q 017982 257 K--KPAGTA---EEIEKH-FG-CQSSQLIMVGDR----PFTDIVYGNRNGFLTILTEPLS 305 (363)
Q Consensus 257 k--KP~p~~---~~alk~-lg-l~pee~vmVGDr----L~TDI~~A~raGi~TIlV~p~~ 305 (363)
. -|-..+ ..+.++ .| ++.-.+++|||- ...-+.++...|+...++.|-.
T Consensus 131 ~~~HPtQaL~Dl~Ti~e~~~g~l~g~kia~vGD~~~~v~~Sl~~~~~~~g~~v~~~~P~~ 190 (332)
T PRK04284 131 DEDHPTQVLADFLTAKEHLKKPYKDIKFTYVGDGRNNVANALMQGAAIMGMDFHLVCPKE 190 (332)
T ss_pred CCCChHHHHHHHHHHHHHhcCCcCCcEEEEecCCCcchHHHHHHHHHHcCCEEEEECCcc
Confidence 3 344333 345566 35 666799999995 2345777888999988888653
No 253
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=57.58 E-value=29 Score=31.11 Aligned_cols=89 Identities=16% Similarity=0.189 Sum_probs=52.4
Q ss_pred hHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEcccCCCchhHHHHHHHhCCCCCcEEEEccCC
Q 017982 205 PLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAGTAEEIEKHFGCQSSQLIMVGDRP 284 (363)
Q Consensus 205 ~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~~~kKP~p~~~~alk~lgl~pee~vmVGDrL 284 (363)
++..+|..++ ..|-+++|++...-. ..+..+.+.+|++.......-+. -+..+++++.- ..--++||+..
T Consensus 65 Dil~al~~a~-~~~~~Iavv~~~~~~-------~~~~~~~~ll~~~i~~~~~~~~~-e~~~~i~~~~~-~G~~viVGg~~ 134 (176)
T PF06506_consen 65 DILRALAKAK-KYGPKIAVVGYPNII-------PGLESIEELLGVDIKIYPYDSEE-EIEAAIKQAKA-EGVDVIVGGGV 134 (176)
T ss_dssp HHHHHHHHCC-CCTSEEEEEEESS-S-------CCHHHHHHHHT-EEEEEEESSHH-HHHHHHHHHHH-TT--EEEESHH
T ss_pred HHHHHHHHHH-hcCCcEEEEeccccc-------HHHHHHHHHhCCceEEEEECCHH-HHHHHHHHHHH-cCCcEEECCHH
Confidence 4556666665 456689999977532 12556677778875432223333 24444444321 11357899987
Q ss_pred cccHHHHHHcCCeEEEEcCCC
Q 017982 285 FTDIVYGNRNGFLTILTEPLS 305 (363)
Q Consensus 285 ~TDI~~A~raGi~TIlV~p~~ 305 (363)
=...|++.|+.++++.++.
T Consensus 135 --~~~~A~~~gl~~v~i~sg~ 153 (176)
T PF06506_consen 135 --VCRLARKLGLPGVLIESGE 153 (176)
T ss_dssp --HHHHHHHTTSEEEESS--H
T ss_pred --HHHHHHHcCCcEEEEEecH
Confidence 3788999999999997654
No 254
>COG0731 Fe-S oxidoreductases [Energy production and conversion]
Probab=57.56 E-value=37 Score=33.85 Aligned_cols=35 Identities=26% Similarity=0.287 Sum_probs=29.0
Q ss_pred eeecCCCCCcchhHHHHHHHHHHhCC-CeEEEEeCCC
Q 017982 193 TLTAPYSLTLWGPLSSSIEQCKSVFG-HDIAVFSNSA 228 (363)
Q Consensus 193 TL~~~~~~~~~p~v~e~L~~Lk~~~G-ikl~IVSN~~ 228 (363)
||.......++|.+-+.++.++ ..| ++++||||+.
T Consensus 84 tis~~GEPTLy~~L~elI~~~k-~~g~~~tflvTNgs 119 (296)
T COG0731 84 TISLSGEPTLYPNLGELIEEIK-KRGKKTTFLVTNGS 119 (296)
T ss_pred EEeCCCCcccccCHHHHHHHHH-hcCCceEEEEeCCC
Confidence 4555567788999999999998 578 7999999996
No 255
>cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism. ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH).
Probab=57.36 E-value=2e+02 Score=28.17 Aligned_cols=93 Identities=12% Similarity=0.067 Sum_probs=54.7
Q ss_pred cchhHHHHHHHHHH--hCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEc-----ccCCC--chh-HHHHHHHhC
Q 017982 202 LWGPLSSSIEQCKS--VFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRH-----RVKKP--AGT-AEEIEKHFG 271 (363)
Q Consensus 202 ~~p~v~e~L~~Lk~--~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~-----~~kKP--~p~-~~~alk~lg 271 (363)
+.|+..+.++.++. +.|+.++-+++.+ -..+++++ .+|...+.- +.++. ++. ++.+.+..
T Consensus 105 Llpd~~~tv~aa~~L~~~Gf~vlpyc~dd--------~~~ar~l~-~~G~~~vmPlg~pIGsg~Gi~~~~~I~~I~e~~- 174 (248)
T cd04728 105 LLPDPIETLKAAEILVKEGFTVLPYCTDD--------PVLAKRLE-DAGCAAVMPLGSPIGSGQGLLNPYNLRIIIERA- 174 (248)
T ss_pred cccCHHHHHHHHHHHHHCCCEEEEEeCCC--------HHHHHHHH-HcCCCEeCCCCcCCCCCCCCCCHHHHHHHHHhC-
Confidence 35666666666551 2399888555554 14444444 558776520 11111 232 34444432
Q ss_pred CCCCcEEEEccCC--cccHHHHHHcCCeEEEEcCCCCC
Q 017982 272 CQSSQLIMVGDRP--FTDIVYGNRNGFLTILTEPLSLA 307 (363)
Q Consensus 272 l~pee~vmVGDrL--~TDI~~A~raGi~TIlV~p~~~~ 307 (363)
.--|++|-.+ -.|+..|..+|++.++|.....+
T Consensus 175 ---~vpVI~egGI~tpeda~~AmelGAdgVlV~SAIt~ 209 (248)
T cd04728 175 ---DVPVIVDAGIGTPSDAAQAMELGADAVLLNTAIAK 209 (248)
T ss_pred ---CCcEEEeCCCCCHHHHHHHHHcCCCEEEEChHhcC
Confidence 2346776655 35899999999999999977655
No 256
>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]
Probab=56.35 E-value=35 Score=37.62 Aligned_cols=122 Identities=22% Similarity=0.154 Sum_probs=73.8
Q ss_pred HcCCCEEEEcCCceeecCCCC----------CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhC-
Q 017982 180 RRGFKGVVFDKDNTLTAPYSL----------TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIG- 248 (363)
Q Consensus 180 ~~GIkaVV~DlDnTL~~~~~~----------~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LG- 248 (363)
+..-++||-|+|+||+-.+.+ =..-||.....+++ +.||+++-+|..+- .+ ....+..+..+.
T Consensus 527 kWn~kIVISDIDGTITKSDvLGh~lp~iGkDWTh~GVAkLyt~Ik-~NGYk~lyLSARaI-gQ----A~~TR~yL~nv~Q 600 (738)
T KOG2116|consen 527 KWNDKIVISDIDGTITKSDVLGHVLPMIGKDWTHTGVAKLYTKIK-ENGYKILYLSARAI-GQ----ADSTRQYLKNVEQ 600 (738)
T ss_pred ecCCcEEEecCCCceEhhhhhhhhhhhhcCcchhhhHHHHHHHHH-hCCeeEEEEehhhh-hh----hHHHHHHHHHHhh
Confidence 345688999999999842211 12357778888888 68999999998751 11 123344444432
Q ss_pred ----C---eEEE------------cccCCCchh----HHHHHHHhCCCCCc--EEEEccCCcccHHHHHHcCCeEEEEcC
Q 017982 249 ----I---KVIR------------HRVKKPAGT----AEEIEKHFGCQSSQ--LIMVGDRPFTDIVYGNRNGFLTILTEP 303 (363)
Q Consensus 249 ----i---~~I~------------~~~kKP~p~----~~~alk~lgl~pee--~vmVGDrL~TDI~~A~raGi~TIlV~p 303 (363)
+ |+|. .-.+||... +..|.+.|. +-.+ -+-+|.|. ||+..=+..|+..--+-.
T Consensus 601 dG~~LPdGPViLSPd~lf~Al~REVI~RkPe~FKIAcL~DIk~LF~-p~~nPFYAgFGNR~-TDviSY~~VgVP~~RIFt 678 (738)
T KOG2116|consen 601 DGKKLPDGPVILSPDSLFAALHREVIERKPEVFKIACLTDIKNLFP-PSGNPFYAGFGNRI-TDVISYRQVGVPLSRIFT 678 (738)
T ss_pred cCccCCCCCEEeCCCcchHHHHHHHHHcCchhhhHHHHHHHHHhcC-CCCCceeeecCCCc-ccceeeeeecCCccceEE
Confidence 2 2331 125788861 133444444 2223 45679999 999999999996433333
Q ss_pred CCCCCc
Q 017982 304 LSLAEE 309 (363)
Q Consensus 304 ~~~~~e 309 (363)
.+.++|
T Consensus 679 INpkGE 684 (738)
T KOG2116|consen 679 INPKGE 684 (738)
T ss_pred ECCCce
Confidence 444445
No 257
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=56.00 E-value=14 Score=33.37 Aligned_cols=16 Identities=38% Similarity=0.563 Sum_probs=13.8
Q ss_pred cCCCEEEEcCCceeec
Q 017982 181 RGFKGVVFDKDNTLTA 196 (363)
Q Consensus 181 ~GIkaVV~DlDnTL~~ 196 (363)
..+++++||+|+||..
T Consensus 4 ~~~~~iiFD~DGTL~d 19 (226)
T PRK13222 4 MDIRAVAFDLDGTLVD 19 (226)
T ss_pred CcCcEEEEcCCccccc
Confidence 3588999999999984
No 258
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=55.97 E-value=11 Score=35.39 Aligned_cols=15 Identities=40% Similarity=0.625 Sum_probs=13.3
Q ss_pred CCCEEEEcCCceeec
Q 017982 182 GFKGVVFDKDNTLTA 196 (363)
Q Consensus 182 GIkaVV~DlDnTL~~ 196 (363)
.+++|+||+|+||..
T Consensus 21 ~~k~viFDlDGTLiD 35 (248)
T PLN02770 21 PLEAVLFDVDGTLCD 35 (248)
T ss_pred ccCEEEEcCCCccCc
Confidence 478999999999974
No 259
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=55.77 E-value=14 Score=34.16 Aligned_cols=15 Identities=40% Similarity=0.600 Sum_probs=13.3
Q ss_pred CCCEEEEcCCceeec
Q 017982 182 GFKGVVFDKDNTLTA 196 (363)
Q Consensus 182 GIkaVV~DlDnTL~~ 196 (363)
.+++++||+|+||..
T Consensus 3 ~~~~iiFDlDGTL~D 17 (220)
T COG0546 3 MIKAILFDLDGTLVD 17 (220)
T ss_pred CCCEEEEeCCCcccc
Confidence 578999999999985
No 260
>COG1609 PurR Transcriptional regulators [Transcription]
Probab=55.40 E-value=93 Score=30.74 Aligned_cols=128 Identities=15% Similarity=0.110 Sum_probs=73.6
Q ss_pred CCCccchhhhcc--cccccCCC-------CCeEEEEcc-------hhHHHHHHhhccccccccchhhhhhhhcCCCC---
Q 017982 100 NQDPESQNQEQD--EEPRYNKD-------KYWTVLCTN-------MWWSQLKAALGQRINVEGIVSSTVVFAKDRHL--- 160 (363)
Q Consensus 100 ~~~~~~~~~~~~--~~~~~~~~-------~~k~~v~G~-------~~~~~~~~~~~q~ln~~Gi~~~~~~l~~~P~L--- 160 (363)
+-.+||++.... ||=-+.|+ .+++.++|- .+..++++.+++.+...|+.......-.+|..
T Consensus 26 ~Vs~eTr~kV~~a~~elgY~pN~~Ar~L~~~~s~~Ig~i~p~~~~~~~~~i~~gi~~~~~~~gy~~~l~~~~~~~~~e~~ 105 (333)
T COG1609 26 YVSEETREKVLAAIKELGYRPNAVARSLRTGRTKTIGLVVPDITNPFFAEILKGIEEAAREAGYSLLLANTDDDPEKERE 105 (333)
T ss_pred CCCHHHHHHHHHHHHHHCCCCCHHHHHHHhCCCCEEEEEeCCCCCchHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHH
Confidence 566788776652 23334444 346666665 79999999999999988888754321111100
Q ss_pred ---CCCCcccCC-------ccCCChHHHHHcCCCEEEEcCCce-eec-CCCCCcchhHHHHHHHHHHhCCC-eEEEEeCC
Q 017982 161 ---ALPHVTVPD-------IRYIDWAELQRRGFKGVVFDKDNT-LTA-PYSLTLWGPLSSSIEQCKSVFGH-DIAVFSNS 227 (363)
Q Consensus 161 ---~~P~~~v~s-------I~~Id~~~L~~~GIkaVV~DlDnT-L~~-~~~~~~~p~v~e~L~~Lk~~~Gi-kl~IVSN~ 227 (363)
..-...++- ..+-..+.|.+.|+..|++|.... ... .=..+-..+...+.+.|. +.|+ ++++++..
T Consensus 106 ~~~~l~~~~vdGiIi~~~~~~~~~~~~l~~~~~P~V~i~~~~~~~~~~~V~~Dn~~~~~~a~~~L~-~~G~~~i~~i~~~ 184 (333)
T COG1609 106 YLETLLQKRVDGLILLGERPNDSLLELLAAAGIPVVVIDRSPPGLGVPSVGIDNFAGAYLATEHLI-ELGHRRIAFIGGP 184 (333)
T ss_pred HHHHHHHcCCCEEEEecCCCCHHHHHHHHhcCCCEEEEeCCCccCCCCEEEEChHHHHHHHHHHHH-HCCCceEEEEeCC
Confidence 000000111 111113567788999999886332 100 112234567788888888 5676 48888877
Q ss_pred C
Q 017982 228 A 228 (363)
Q Consensus 228 ~ 228 (363)
.
T Consensus 185 ~ 185 (333)
T COG1609 185 L 185 (333)
T ss_pred C
Confidence 4
No 261
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=55.28 E-value=9.6 Score=36.12 Aligned_cols=15 Identities=27% Similarity=0.333 Sum_probs=13.3
Q ss_pred CCEEEEcCCceeecC
Q 017982 183 FKGVVFDKDNTLTAP 197 (363)
Q Consensus 183 IkaVV~DlDnTL~~~ 197 (363)
+++|+||+|+||...
T Consensus 4 ~k~vIFDlDGTLiDs 18 (267)
T PRK13478 4 IQAVIFDWAGTTVDF 18 (267)
T ss_pred eEEEEEcCCCCeecC
Confidence 689999999999863
No 262
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=55.10 E-value=12 Score=34.17 Aligned_cols=15 Identities=27% Similarity=0.419 Sum_probs=13.5
Q ss_pred CCCEEEEcCCceeec
Q 017982 182 GFKGVVFDKDNTLTA 196 (363)
Q Consensus 182 GIkaVV~DlDnTL~~ 196 (363)
.+++|+||+|+||..
T Consensus 6 ~~k~iiFD~DGTL~d 20 (222)
T PRK10826 6 QILAAIFDMDGLLID 20 (222)
T ss_pred cCcEEEEcCCCCCCc
Confidence 589999999999975
No 263
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=54.94 E-value=10 Score=35.39 Aligned_cols=14 Identities=29% Similarity=0.439 Sum_probs=12.7
Q ss_pred CCEEEEcCCceeec
Q 017982 183 FKGVVFDKDNTLTA 196 (363)
Q Consensus 183 IkaVV~DlDnTL~~ 196 (363)
+++|+||+|+||..
T Consensus 2 ~k~viFD~DGTLiD 15 (253)
T TIGR01422 2 IEAVIFDWAGTTVD 15 (253)
T ss_pred ceEEEEeCCCCeec
Confidence 68999999999986
No 264
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=54.88 E-value=7.1 Score=36.30 Aligned_cols=20 Identities=35% Similarity=0.584 Sum_probs=16.3
Q ss_pred CCChHHHHHcCCCEEEEcCCceeec
Q 017982 172 YIDWAELQRRGFKGVVFDKDNTLTA 196 (363)
Q Consensus 172 ~Id~~~L~~~GIkaVV~DlDnTL~~ 196 (363)
+|+|. -+++|+||+|+||..
T Consensus 4 ~~~~~-----~~k~vIFDlDGTL~d 23 (224)
T PRK14988 4 DIAWQ-----DVDTVLLDMDGTLLD 23 (224)
T ss_pred CCCcc-----cCCEEEEcCCCCccc
Confidence 45664 489999999999986
No 265
>PRK15424 propionate catabolism operon regulatory protein PrpR; Provisional
Probab=54.85 E-value=1.4e+02 Score=32.10 Aligned_cols=98 Identities=9% Similarity=0.089 Sum_probs=60.3
Q ss_pred hHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEcccCCCchh--HHHHHHHhCCCCCcEEEEcc
Q 017982 205 PLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAGT--AEEIEKHFGCQSSQLIMVGD 282 (363)
Q Consensus 205 ~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~~~kKP~p~--~~~alk~lgl~pee~vmVGD 282 (363)
++..+|..++ ..+-+++||+-..- -..++.+.+.++++........+... ...-++..|+ -++|||
T Consensus 95 Dil~al~~a~-~~~~~iavv~~~~~-------~~~~~~~~~~l~~~i~~~~~~~~~e~~~~v~~lk~~G~----~~vvG~ 162 (538)
T PRK15424 95 DVMQALARAR-KLTSSIGVVTYQET-------IPALVAFQKTFNLRIEQRSYVTEEDARGQINELKANGI----EAVVGA 162 (538)
T ss_pred HHHHHHHHHH-hcCCcEEEEecCcc-------cHHHHHHHHHhCCceEEEEecCHHHHHHHHHHHHHCCC----CEEEcC
Confidence 4666676666 46668999987642 24567788888887432222333321 1223344454 467899
Q ss_pred CCcccHHHHHHcCCeEEEEcCCCCCCchhHHHHHHHHH
Q 017982 283 RPFTDIVYGNRNGFLTILTEPLSLAEEPFIVRQVRKLE 320 (363)
Q Consensus 283 rL~TDI~~A~raGi~TIlV~p~~~~~e~~~t~~~R~lE 320 (363)
.+ + ...|.++|+..+++.. .|.+...+-+.+|
T Consensus 163 ~~-~-~~~A~~~g~~g~~~~s----~e~i~~a~~~A~~ 194 (538)
T PRK15424 163 GL-I-TDLAEEAGMTGIFIYS----AATVRQAFEDALD 194 (538)
T ss_pred ch-H-HHHHHHhCCceEEecC----HHHHHHHHHHHHH
Confidence 88 3 7889999999999973 2444444444444
No 266
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=54.73 E-value=70 Score=34.68 Aligned_cols=101 Identities=12% Similarity=0.170 Sum_probs=70.0
Q ss_pred HHHHcCCCEEEEcCCceeec--CCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEc
Q 017982 177 ELQRRGFKGVVFDKDNTLTA--PYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRH 254 (363)
Q Consensus 177 ~L~~~GIkaVV~DlDnTL~~--~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~ 254 (363)
...+.|=.-+++-.|+.+.. .-+..+.|+++|-+.+|+ +.|++.+.+|.-. ..-+..+.+.-|++-. .
T Consensus 421 ~vs~~GGTPL~V~~~~~~~GVI~LkDivK~Gi~ERf~elR-~MgIkTvM~TGDN--------~~TAa~IA~EAGVDdf-i 490 (681)
T COG2216 421 EVSRLGGTPLVVVENGRILGVIYLKDIVKPGIKERFAELR-KMGIKTVMITGDN--------PLTAAAIAAEAGVDDF-I 490 (681)
T ss_pred HHHhcCCCceEEEECCEEEEEEEehhhcchhHHHHHHHHH-hcCCeEEEEeCCC--------HHHHHHHHHHhCchhh-h
Confidence 34456666555555666532 245667899999999998 6999999999764 3567889999999843 2
Q ss_pred ccCCCchhHHHHHHHhCCCCCcEEEEccCCcccHH
Q 017982 255 RVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIV 289 (363)
Q Consensus 255 ~~kKP~p~~~~alk~lgl~pee~vmVGDrL~TDI~ 289 (363)
+..||.-.+. ++++-.-.-.=+.|.||-- .|--
T Consensus 491 AeatPEdK~~-~I~~eQ~~grlVAMtGDGT-NDAP 523 (681)
T COG2216 491 AEATPEDKLA-LIRQEQAEGRLVAMTGDGT-NDAP 523 (681)
T ss_pred hcCChHHHHH-HHHHHHhcCcEEEEcCCCC-Ccch
Confidence 4568886543 3344455556788999986 4543
No 267
>COG0761 lytB 4-Hydroxy-3-methylbut-2-enyl diphosphate reductase IspH [Lipid metabolism]
Probab=54.08 E-value=1e+02 Score=30.78 Aligned_cols=105 Identities=15% Similarity=0.184 Sum_probs=64.4
Q ss_pred cchhHHHHHHHHHHhCCC-------eEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEcccCCCc-h-hHHHHHHHhCC
Q 017982 202 LWGPLSSSIEQCKSVFGH-------DIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPA-G-TAEEIEKHFGC 272 (363)
Q Consensus 202 ~~p~v~e~L~~Lk~~~Gi-------kl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~~~kKP~-p-~~~~alk~lgl 272 (363)
-.++..+.++.|++++-. .||-+|-+- ...++.++...++-.+. +.++-+ . .+.++.++.|.
T Consensus 169 s~ddt~~Iv~~l~~r~p~~~~~~~~~ICyAT~nR--------Q~Avk~la~~~Dl~iVV-G~~nSSNs~rL~eiA~~~g~ 239 (294)
T COG0761 169 SVDDTAEIVAALKERFPKIEVPPFNDICYATQNR--------QDAVKELAPEVDLVIVV-GSKNSSNSNRLAEIAKRHGK 239 (294)
T ss_pred CHHHHHHHHHHHHHhCccccCCcccccchhhhhH--------HHHHHHHhhcCCEEEEE-CCCCCccHHHHHHHHHHhCC
Confidence 356777777777754421 133333221 24456666665554443 222222 2 36778888887
Q ss_pred CCCcEEEEccCCcccHHHHHHcCCeEEEEcCCCCCCchhHHHHHHHHH
Q 017982 273 QSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSLAEEPFIVRQVRKLE 320 (363)
Q Consensus 273 ~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~~~~e~~~t~~~R~lE 320 (363)
.+.+|++- .||...--.|..+|.|..+..+.|.....+.++|+
T Consensus 240 ---~aylId~~--~ei~~~w~~~~~~VGvTAGAStPd~lV~~Vi~~l~ 282 (294)
T COG0761 240 ---PAYLIDDA--EEIDPEWLKGVKTVGVTAGASTPDWLVQEVIAKLR 282 (294)
T ss_pred ---CeEEeCCh--HhCCHHHhcCccEEEEecCCCCCHHHHHHHHHHHH
Confidence 67888764 58999999999999999887776765544444443
No 268
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=53.38 E-value=17 Score=35.20 Aligned_cols=16 Identities=25% Similarity=0.304 Sum_probs=13.8
Q ss_pred cCCCEEEEcCCceeec
Q 017982 181 RGFKGVVFDKDNTLTA 196 (363)
Q Consensus 181 ~GIkaVV~DlDnTL~~ 196 (363)
.-+++|+||+|+||..
T Consensus 38 ~~~k~VIFDlDGTLvD 53 (286)
T PLN02779 38 ALPEALLFDCDGVLVE 53 (286)
T ss_pred cCCcEEEEeCceeEEc
Confidence 3479999999999985
No 269
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=53.36 E-value=15 Score=35.67 Aligned_cols=34 Identities=24% Similarity=0.369 Sum_probs=21.4
Q ss_pred cCCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCC
Q 017982 181 RGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGH 219 (363)
Q Consensus 181 ~GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gi 219 (363)
..+++++||+|+||.. + .+....+++++.++.|+
T Consensus 60 ~~~k~vIFDlDGTLiD--S---~~~~~~a~~~~~~~~G~ 93 (273)
T PRK13225 60 QTLQAIIFDFDGTLVD--S---LPTVVAIANAHAPDFGY 93 (273)
T ss_pred hhcCEEEECCcCcccc--C---HHHHHHHHHHHHHHCCC
Confidence 4689999999999975 2 12333444444334554
No 270
>PRK14805 ornithine carbamoyltransferase; Provisional
Probab=51.72 E-value=2.5e+02 Score=27.79 Aligned_cols=114 Identities=15% Similarity=0.118 Sum_probs=72.5
Q ss_pred HHHHcCCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEccc
Q 017982 177 ELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRV 256 (363)
Q Consensus 177 ~L~~~GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~~~ 256 (363)
..++.|-.++.+|.... . ..+ -+.+.+..+.|. .+ ..++|+=... ...++.+.+..++|+|-...
T Consensus 59 A~~~LGg~~i~l~~~~s-s-~~k---gEsl~Dt~~vls-~y-~D~iviR~~~--------~~~~~~~a~~~~vPVINa~~ 123 (302)
T PRK14805 59 GINKLGGHCLYLDQQNG-A-LGK---RESVADFAANLS-CW-ADAIVARVFS--------HSTIEQLAEHGSVPVINALC 123 (302)
T ss_pred HHHHcCCcEEECCCCcC-c-CCC---CcCHHHHHHHHH-Hh-CCEEEEeCCC--------hhHHHHHHHhCCCCEEECCC
Confidence 45577999988875432 2 122 344556666665 34 3555554432 25677788888999987544
Q ss_pred CCCch--hH---HHHHHHhC-CCCCcEEEEccCC---cccHHHHHHcCCeEEEEcCCC
Q 017982 257 KKPAG--TA---EEIEKHFG-CQSSQLIMVGDRP---FTDIVYGNRNGFLTILTEPLS 305 (363)
Q Consensus 257 kKP~p--~~---~~alk~lg-l~pee~vmVGDrL---~TDI~~A~raGi~TIlV~p~~ 305 (363)
..-+| .+ ..+.+++| ++--.+++|||-- ...+.++.+.|+...++.|..
T Consensus 124 ~~~HPtQaL~Dl~Ti~e~~g~l~g~kva~vGD~~~v~~S~~~~~~~~g~~v~~~~P~~ 181 (302)
T PRK14805 124 DLYHPCQALADFLTLAEQFGDVSKVKLAYVGDGNNVTHSLMYGAAILGATMTVICPPG 181 (302)
T ss_pred CCCChHHHHHHHHHHHHHhCCcCCcEEEEEcCCCccHHHHHHHHHHcCCEEEEECCch
Confidence 44444 33 34556666 5666899999932 235778888999988888654
No 271
>PRK09449 dUMP phosphatase; Provisional
Probab=51.50 E-value=13 Score=33.90 Aligned_cols=15 Identities=33% Similarity=0.574 Sum_probs=13.3
Q ss_pred CCCEEEEcCCceeec
Q 017982 182 GFKGVVFDKDNTLTA 196 (363)
Q Consensus 182 GIkaVV~DlDnTL~~ 196 (363)
.+++|+||+||||..
T Consensus 2 ~~k~iiFDlDGTLid 16 (224)
T PRK09449 2 KYDWILFDADETLFH 16 (224)
T ss_pred CccEEEEcCCCchhc
Confidence 478999999999985
No 272
>PRK00779 ornithine carbamoyltransferase; Provisional
Probab=51.26 E-value=2.6e+02 Score=27.72 Aligned_cols=114 Identities=14% Similarity=0.120 Sum_probs=72.4
Q ss_pred HHHHcCCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEccc
Q 017982 177 ELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRV 256 (363)
Q Consensus 177 ~L~~~GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~~~ 256 (363)
..++.|-+++.+|...+ .. . .-+.+.+.++.|. .+ ..++++=-.. ...++.+.+..++|+|-.+.
T Consensus 64 A~~~LGg~~i~l~~~~s-s~-~---kgEsl~Dt~~~l~-~~-~D~iv~R~~~--------~~~~~~~a~~~~vPVINag~ 128 (304)
T PRK00779 64 GMAQLGGHAIFLSPRDT-QL-G---RGEPIEDTARVLS-RY-VDAIMIRTFE--------HETLEELAEYSTVPVINGLT 128 (304)
T ss_pred HHHHcCCcEEEECcccc-cC-C---CCcCHHHHHHHHH-Hh-CCEEEEcCCC--------hhHHHHHHHhCCCCEEeCCC
Confidence 45577999988866332 11 2 2345566666665 34 3555554332 25677888888999986443
Q ss_pred CCCch--hH---HHHHHHhC-CCCCcEEEEccC--C-cccHHHHHHcCCeEEEEcCCC
Q 017982 257 KKPAG--TA---EEIEKHFG-CQSSQLIMVGDR--P-FTDIVYGNRNGFLTILTEPLS 305 (363)
Q Consensus 257 kKP~p--~~---~~alk~lg-l~pee~vmVGDr--L-~TDI~~A~raGi~TIlV~p~~ 305 (363)
..-+| .+ ..+.+++| ++.-.+++|||. . ...+.+..+.|+...++.|..
T Consensus 129 ~~~HPtQaL~Dl~Ti~e~~g~l~gl~i~~vGd~~~v~~Sl~~~l~~~g~~v~~~~P~~ 186 (304)
T PRK00779 129 DLSHPCQILADLLTIYEHRGSLKGLKVAWVGDGNNVANSLLLAAALLGFDLRVATPKG 186 (304)
T ss_pred CCCChHHHHHHHHHHHHHhCCcCCcEEEEEeCCCccHHHHHHHHHHcCCEEEEECCcc
Confidence 34344 33 34556676 666789999992 1 234777788999988888754
No 273
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=50.97 E-value=9.6 Score=35.58 Aligned_cols=15 Identities=33% Similarity=0.516 Sum_probs=13.5
Q ss_pred CCCEEEEcCCceeec
Q 017982 182 GFKGVVFDKDNTLTA 196 (363)
Q Consensus 182 GIkaVV~DlDnTL~~ 196 (363)
.+++|+||+|+||..
T Consensus 9 ~~k~iiFDlDGTL~D 23 (238)
T PRK10748 9 RISALTFDLDDTLYD 23 (238)
T ss_pred CceeEEEcCcccccC
Confidence 579999999999975
No 274
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=49.89 E-value=18 Score=32.46 Aligned_cols=12 Identities=25% Similarity=0.534 Sum_probs=10.7
Q ss_pred EEEEcCCceeec
Q 017982 185 GVVFDKDNTLTA 196 (363)
Q Consensus 185 aVV~DlDnTL~~ 196 (363)
+|+||+|+||..
T Consensus 2 ~viFD~DGTLiD 13 (197)
T TIGR01548 2 ALVLDMDGVMAD 13 (197)
T ss_pred ceEEecCceEEe
Confidence 689999999985
No 275
>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway.; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process
Probab=49.29 E-value=21 Score=36.86 Aligned_cols=45 Identities=22% Similarity=0.265 Sum_probs=28.7
Q ss_pred cCCCchhHHHHHHHh----CCCCCcEEEEccCCcccHHHHH----HcCCeEEEEc
Q 017982 256 VKKPAGTAEEIEKHF----GCQSSQLIMVGDRPFTDIVYGN----RNGFLTILTE 302 (363)
Q Consensus 256 ~kKP~p~~~~alk~l----gl~pee~vmVGDrL~TDI~~A~----raGi~TIlV~ 302 (363)
++--+-+...+.+.+ ++.++++++||||.. -.||| |.-+.|+||.
T Consensus 347 IGdKs~GV~~lQ~y~~~~~~i~~~~tLHVGDQF~--s~GaNDfkaR~a~~t~WIa 399 (408)
T PF06437_consen 347 IGDKSLGVRALQKYFDPEGGIKPSETLHVGDQFL--SAGANDFKARLACTTAWIA 399 (408)
T ss_pred cCCcHHhHHHHHHHHHhccCCCccceeeehhhhh--ccCCcchhhhhhceeeEec
Confidence 343333444455556 899999999999983 22323 3345689996
No 276
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=49.26 E-value=90 Score=35.59 Aligned_cols=84 Identities=18% Similarity=0.278 Sum_probs=56.6
Q ss_pred CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeE-----------------------------
Q 017982 201 TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV----------------------------- 251 (363)
Q Consensus 201 ~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~----------------------------- 251 (363)
.+-+++.++++.|+ +.|+++.++|.-. ..-++.|.+.+|+..
T Consensus 584 PPR~ev~~ai~~c~-~aGIrV~mITGD~--------~~TA~AI~r~iGi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~ 654 (972)
T KOG0202|consen 584 PPRPEVADAIELCR-QAGIRVIMITGDN--------KETAEAIAREIGIFSEDEDVSSMALTGSEFDDLSDEELDDAVRR 654 (972)
T ss_pred CCchhHHHHHHHHH-HcCCEEEEEcCCC--------HHHHHHHHHHhCCCcCCccccccccchhhhhcCCHHHHHHHhhc
Confidence 45789999999999 6899999999764 366778888887631
Q ss_pred --EEcccCCCchhHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCC
Q 017982 252 --IRHRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGF 296 (363)
Q Consensus 252 --I~~~~kKP~p~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi 296 (363)
++.++ -|.-. .++.+.|.-..+=+.|-||-. .|--+=+.|.+
T Consensus 655 ~~vFaR~-~P~HK-~kIVeaLq~~geivAMTGDGV-NDApALK~AdI 698 (972)
T KOG0202|consen 655 VLVFARA-EPQHK-LKIVEALQSRGEVVAMTGDGV-NDAPALKKADI 698 (972)
T ss_pred ceEEEec-CchhH-HHHHHHHHhcCCEEEecCCCc-cchhhhhhccc
Confidence 11122 23321 234444444446788999999 79887666543
No 277
>TIGR00365 monothiol glutaredoxin, Grx4 family. The gene for the member of this glutaredoxin family in E. coli, originally designated ydhD, is now designated grxD. Its protein, Grx4, is a monothiol glutaredoxin similar to Grx5 of yeast, which is involved in iron-sulfur cluster formation.
Probab=47.98 E-value=1.5e+02 Score=24.05 Aligned_cols=86 Identities=9% Similarity=0.071 Sum_probs=47.1
Q ss_pred HHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEcccCCCchhHHHHHHHhCCCCCcEEEEccCC---
Q 017982 208 SSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAGTAEEIEKHFGCQSSQLIMVGDRP--- 284 (363)
Q Consensus 208 e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~~~kKP~p~~~~alk~lgl~pee~vmVGDrL--- 284 (363)
+.++++.. ..+++|.|-+....++=|.-.+++.+++.+|+++......+-......+.+..|...=-.++||+..
T Consensus 3 ~~v~~~i~--~~~Vvvf~kg~~~~~~Cp~C~~ak~lL~~~~i~~~~~di~~~~~~~~~l~~~tg~~tvP~vfi~g~~iGG 80 (97)
T TIGR00365 3 ERIKEQIK--ENPVVLYMKGTPQFPQCGFSARAVQILKACGVPFAYVNVLEDPEIRQGIKEYSNWPTIPQLYVKGEFVGG 80 (97)
T ss_pred HHHHHHhc--cCCEEEEEccCCCCCCCchHHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHhCCCCCCEEEECCEEEeC
Confidence 34555553 2378888754211111123468899999999997543343322223344444454444567888875
Q ss_pred cccHHHHHHcC
Q 017982 285 FTDIVYGNRNG 295 (363)
Q Consensus 285 ~TDI~~A~raG 295 (363)
+.|+....+.|
T Consensus 81 ~ddl~~l~~~g 91 (97)
T TIGR00365 81 CDIIMEMYQSG 91 (97)
T ss_pred hHHHHHHHHCc
Confidence 24555554444
No 278
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=47.50 E-value=69 Score=36.54 Aligned_cols=86 Identities=17% Similarity=0.142 Sum_probs=58.8
Q ss_pred CCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe-------EE-------------------
Q 017982 199 SLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK-------VI------------------- 252 (363)
Q Consensus 199 ~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~-------~I------------------- 252 (363)
...+-+++.++++.|+ ++|+++.++|.-. ..-+..+.+.+|+. ++
T Consensus 545 ~Dppr~~v~~aI~~l~-~AGI~v~MiTGD~--------~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~ 615 (917)
T COG0474 545 EDPPREDVKEAIEELR-EAGIKVWMITGDH--------VETAIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEE 615 (917)
T ss_pred cCCCCccHHHHHHHHH-HCCCcEEEECCCC--------HHHHHHHHHHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhh
Confidence 3456789999999998 6899999999764 25566777777642 11
Q ss_pred ---EcccCCCchh--HHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeE
Q 017982 253 ---RHRVKKPAGT--AEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLT 298 (363)
Q Consensus 253 ---~~~~kKP~p~--~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~T 298 (363)
+.+ --|... +-+++++. -+-++|+||-. +|+-+=+.|-+.-
T Consensus 616 ~~VfAR-vsP~qK~~IV~~lq~~---g~vVamtGDGv-NDapALk~ADVGI 661 (917)
T COG0474 616 LSVFAR-VSPEQKARIVEALQKS---GHVVAMTGDGV-NDAPALKAADVGI 661 (917)
T ss_pred CcEEEE-cCHHHHHHHHHHHHhC---CCEEEEeCCCc-hhHHHHHhcCccE
Confidence 111 133331 23344444 45789999999 8999988887654
No 279
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=47.31 E-value=9.6 Score=34.04 Aligned_cols=16 Identities=38% Similarity=0.366 Sum_probs=13.4
Q ss_pred CCEEEEcCCceeecCC
Q 017982 183 FKGVVFDKDNTLTAPY 198 (363)
Q Consensus 183 IkaVV~DlDnTL~~~~ 198 (363)
+++|+||+||||..+.
T Consensus 1 ik~viFD~dgTLiD~~ 16 (198)
T TIGR01428 1 IKALVFDVYGTLFDVH 16 (198)
T ss_pred CcEEEEeCCCcCccHH
Confidence 5789999999998643
No 280
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=47.19 E-value=1.4e+02 Score=28.76 Aligned_cols=40 Identities=10% Similarity=0.141 Sum_probs=30.4
Q ss_pred hHHHHHHHhCCCCCcEEEEccCCcccHHH----HHHcCCeEEEEc
Q 017982 262 TAEEIEKHFGCQSSQLIMVGDRPFTDIVY----GNRNGFLTILTE 302 (363)
Q Consensus 262 ~~~~alk~lgl~pee~vmVGDrL~TDI~~----A~raGi~TIlV~ 302 (363)
.+..++.++|..|+.++||.|+. ..+.. .+..|+..+.+.
T Consensus 166 ~L~~fL~~~~~~pk~IIfIDD~~-~nl~sv~~a~k~~~I~f~G~~ 209 (252)
T PF11019_consen 166 VLKYFLDKINQSPKKIIFIDDNK-ENLKSVEKACKKSGIDFIGFH 209 (252)
T ss_pred HHHHHHHHcCCCCCeEEEEeCCH-HHHHHHHHHHhhCCCcEEEEE
Confidence 46788999999999999999997 35543 334677766664
No 281
>cd03028 GRX_PICOT_like Glutaredoxin (GRX) family, PKC-interacting cousin of TRX (PICOT)-like subfamily; composed of PICOT and GRX-PICOT-like proteins. The non-PICOT members of this family contain only the GRX-like domain, whereas PICOT contains an N-terminal TRX-like domain followed by one to three GRX-like domains. It is interesting to note that PICOT from plants contain three repeats of the GRX-like domain, metazoan proteins (except for insect) have two repeats, while fungal sequences contain only one copy of the domain. PICOT is a protein that interacts with protein kinase C (PKC) theta, a calcium independent PKC isoform selectively expressed in skeletal muscle and T lymphocytes. PICOT inhibits the activation of c-Jun N-terminal kinase and the transcription factors, AP-1 and NF-kB, induced by PKC theta or T-cell activating stimuli. Both GRX and TRX domains of PICOT are required for its activity. Characterized non-PICOT members of this family include CXIP1, a CAX-interacting protein
Probab=47.11 E-value=1.4e+02 Score=23.58 Aligned_cols=77 Identities=6% Similarity=0.056 Sum_probs=42.1
Q ss_pred CeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEcccCCCchhHHHHHHHhCCCCCcEEEEccCCc---ccHHHHHHcC
Q 017982 219 HDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPF---TDIVYGNRNG 295 (363)
Q Consensus 219 ikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~~~kKP~p~~~~alk~lgl~pee~vmVGDrL~---TDI~~A~raG 295 (363)
.+++|+|.+....++=|.-.+++.+++..|+++......+-......+.+..|..-=-.++||+++. .|++..++.|
T Consensus 8 ~~vvvf~k~~~~~~~Cp~C~~ak~~L~~~~i~y~~idv~~~~~~~~~l~~~~g~~tvP~vfi~g~~iGG~~~l~~l~~~g 87 (90)
T cd03028 8 NPVVLFMKGTPEEPRCGFSRKVVQILNQLGVDFGTFDILEDEEVRQGLKEYSNWPTFPQLYVNGELVGGCDIVKEMHESG 87 (90)
T ss_pred CCEEEEEcCCCCCCCCcHHHHHHHHHHHcCCCeEEEEcCCCHHHHHHHHHHhCCCCCCEEEECCEEEeCHHHHHHHHHcC
Confidence 4788888753212111234688899999999975434433322334444445643334567776642 3444444444
No 282
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=46.13 E-value=19 Score=31.38 Aligned_cols=31 Identities=19% Similarity=0.175 Sum_probs=18.6
Q ss_pred EEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCe
Q 017982 185 GVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHD 220 (363)
Q Consensus 185 aVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gik 220 (363)
+++||+|+||... .+....+++++.+..|+.
T Consensus 1 ~iiFD~DGTL~ds-----~~~~~~~~~~~~~~~g~~ 31 (185)
T TIGR01990 1 AVIFDLDGVITDT-----AEYHYLAWKALADELGIP 31 (185)
T ss_pred CeEEcCCCccccC-----hHHHHHHHHHHHHHcCCC
Confidence 4799999999741 233334455554455643
No 283
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=45.68 E-value=18 Score=31.95 Aligned_cols=13 Identities=46% Similarity=0.455 Sum_probs=11.1
Q ss_pred CEEEEcCCceeec
Q 017982 184 KGVVFDKDNTLTA 196 (363)
Q Consensus 184 kaVV~DlDnTL~~ 196 (363)
.+|+||+||||..
T Consensus 1 ~~viFDlDGTL~d 13 (184)
T TIGR01993 1 DVWFFDLDNTLYP 13 (184)
T ss_pred CeEEEeCCCCCCC
Confidence 3689999999974
No 284
>TIGR00658 orni_carb_tr ornithine carbamoyltransferase. Most OTCases are homotrimers, but the homotrimers are organized into dodecamers built from four trimers in at least two species; the catabolic OTCase of Pseudomonas aeruginosa is allosterically regulated, while OTCase of the extreme thermophile Pyrococcus furiosus shows both allostery and thermophily.
Probab=45.38 E-value=3.2e+02 Score=27.06 Aligned_cols=114 Identities=14% Similarity=0.166 Sum_probs=72.7
Q ss_pred HHHHcCCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEccc
Q 017982 177 ELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRV 256 (363)
Q Consensus 177 ~L~~~GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~~~ 256 (363)
..++.|-.++.+|..+. .... -+.+.+.++.|. .+ ..++|+=... ...++.+.+..++|+|-...
T Consensus 60 A~~~LGg~~i~l~~~~s--s~~k---gEsl~Dt~~vls-~y-~D~iv~R~~~--------~~~~~~~a~~~~vPVINa~~ 124 (304)
T TIGR00658 60 AAYQLGGHPLYLNPNDL--QLGR---GESIKDTARVLS-RY-VDGIMARVYK--------HEDVEELAKYASVPVINGLT 124 (304)
T ss_pred HHHHcCCCEEEeCCccc--cCCC---CCCHHHHHHHHH-Hh-CCEEEEECCC--------hHHHHHHHHhCCCCEEECCC
Confidence 45578999998876442 1122 345566666665 45 3555555432 35677888889999986433
Q ss_pred CC--CchhH---HHHHHHhC-CCCCcEEEEccC---CcccHHHHHHcCCeEEEEcCCC
Q 017982 257 KK--PAGTA---EEIEKHFG-CQSSQLIMVGDR---PFTDIVYGNRNGFLTILTEPLS 305 (363)
Q Consensus 257 kK--P~p~~---~~alk~lg-l~pee~vmVGDr---L~TDI~~A~raGi~TIlV~p~~ 305 (363)
.. |-..+ ..+.+.+| ++--.+++|||- ....+.++.+.|+...++.|-.
T Consensus 125 ~~~HPtQaL~Dl~Ti~e~~g~l~g~~v~~vGd~~~v~~Sl~~~l~~~g~~v~~~~P~~ 182 (304)
T TIGR00658 125 DLFHPCQALADLLTIIEHFGKLKGVKVVYVGDGNNVCNSLMLAGAKLGMDVVVATPEG 182 (304)
T ss_pred CCCChHHHHHHHHHHHHHhCCCCCcEEEEEeCCCchHHHHHHHHHHcCCEEEEECCch
Confidence 33 43333 34556676 565689999992 2234777888999888887654
No 285
>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway.; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process
Probab=45.35 E-value=76 Score=32.94 Aligned_cols=46 Identities=24% Similarity=0.237 Sum_probs=34.2
Q ss_pred cCCCEEEEcCCceeecCCCC--CcchhHHHHHHHHHHhCCCeEEEEeCCC
Q 017982 181 RGFKGVVFDKDNTLTAPYSL--TLWGPLSSSIEQCKSVFGHDIAVFSNSA 228 (363)
Q Consensus 181 ~GIkaVV~DlDnTL~~~~~~--~~~p~v~e~L~~Lk~~~Gikl~IVSN~~ 228 (363)
.+.+.|-||-|.||.. +.. .....+..-|-+|. +.|++|+|||-..
T Consensus 145 ~~L~LvTFDgDvTLY~-DG~sl~~d~pvi~~ii~LL-~~gv~VgIVTAAG 192 (408)
T PF06437_consen 145 YGLKLVTFDGDVTLYE-DGASLEPDNPVIPRIIKLL-RRGVKVGIVTAAG 192 (408)
T ss_pred CCceEEEEcCCccccc-CCCCCCCCchHHHHHHHHH-hcCCeEEEEeCCC
Confidence 3889999999999964 333 33455666666666 4699999999885
No 286
>TIGR00433 bioB biotin synthetase. Catalyzes the last step of the biotin biosynthesis pathway.
Probab=43.89 E-value=2.9e+02 Score=26.28 Aligned_cols=122 Identities=13% Similarity=0.099 Sum_probs=67.4
Q ss_pred hHHHHHcCCCEEEEcCCceee----cCCCCCcchhHHHHHHHHHHhCCCeEE---EEeCCCCCCCCCccHHHHHHHHHHh
Q 017982 175 WAELQRRGFKGVVFDKDNTLT----APYSLTLWGPLSSSIEQCKSVFGHDIA---VFSNSAGLYEYDNDASKARKLEGKI 247 (363)
Q Consensus 175 ~~~L~~~GIkaVV~DlDnTL~----~~~~~~~~p~v~e~L~~Lk~~~Gikl~---IVSN~~g~~~~dp~~~~a~~i~~~L 247 (363)
.+.|+++|+..+.+++| +-. ......-++...++++.++ +.|+++. |+--.. . ..+.......+..+
T Consensus 126 l~~Lk~aG~~~v~i~~E-~~~~~~~~i~~~~s~~~~~~ai~~l~-~~Gi~v~~~~i~Gl~e--t--~~d~~~~~~~l~~l 199 (296)
T TIGR00433 126 AKRLKDAGLDYYNHNLD-TSQEFYSNIISTHTYDDRVDTLENAK-KAGLKVCSGGIFGLGE--T--VEDRIGLALALANL 199 (296)
T ss_pred HHHHHHcCCCEEEEccc-CCHHHHhhccCCCCHHHHHHHHHHHH-HcCCEEEEeEEEeCCC--C--HHHHHHHHHHHHhC
Confidence 36788999999999988 421 1122345677888899988 5798743 221111 0 00111222344566
Q ss_pred CCeEEE------------cccCCCch-hHHH--HHHHhCCCCCcEEEEccCC--cccHH-H-HHHcCCeEEEEc
Q 017982 248 GIKVIR------------HRVKKPAG-TAEE--IEKHFGCQSSQLIMVGDRP--FTDIV-Y-GNRNGFLTILTE 302 (363)
Q Consensus 248 Gi~~I~------------~~~kKP~p-~~~~--alk~lgl~pee~vmVGDrL--~TDI~-~-A~raGi~TIlV~ 302 (363)
+++.+. .....|+. -+.+ +..++-+++..+-+.|++. +.|.. . |..+|+.+|.+-
T Consensus 200 ~~~~i~l~~l~p~~gT~l~~~~~~s~~~~~~~ia~~r~~lp~~~i~~~~~~~~~~~~~~~~~~l~~G~n~i~~g 273 (296)
T TIGR00433 200 PPESVPINFLVKIKGTPLADNKELSADDALKTIALARIIMPKAEIRLAGGREVNMRELQQAMCFMAGANSIFVG 273 (296)
T ss_pred CCCEEEeeeeEEcCCCccCCCCCCCHHHHHHHHHHHHHHCCcceEEEeCCcchhhhhhHHHHHHHhcCceEEEc
Confidence 765331 01112222 1222 2234456677787888885 23443 3 688899998885
No 287
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=42.75 E-value=12 Score=33.01 Aligned_cols=15 Identities=47% Similarity=0.576 Sum_probs=13.3
Q ss_pred CCCEEEEcCCceeec
Q 017982 182 GFKGVVFDKDNTLTA 196 (363)
Q Consensus 182 GIkaVV~DlDnTL~~ 196 (363)
.++.++||+|+||+.
T Consensus 3 ~~k~viFD~DGTLid 17 (201)
T TIGR01491 3 MIKLIIFDLDGTLTD 17 (201)
T ss_pred cceEEEEeCCCCCcC
Confidence 478999999999985
No 288
>PLN02423 phosphomannomutase
Probab=42.68 E-value=34 Score=32.39 Aligned_cols=39 Identities=8% Similarity=0.014 Sum_probs=31.8
Q ss_pred HHHHHhCCCCCcEEEEccC----CcccHHHHHHcCCeEEEEcCCC
Q 017982 265 EIEKHFGCQSSQLIMVGDR----PFTDIVYGNRNGFLTILTEPLS 305 (363)
Q Consensus 265 ~alk~lgl~pee~vmVGDr----L~TDI~~A~raGi~TIlV~p~~ 305 (363)
.+++.+. ++++++.+||. . .|+.+-+..|+.++-|..-.
T Consensus 192 ~al~~L~-~~~e~~aFGD~~~~~~-ND~eMl~~~~~~~~~~~~~~ 234 (245)
T PLN02423 192 YCLQFLE-DFDEIHFFGDKTYEGG-NDHEIFESERTIGHTVTSPD 234 (245)
T ss_pred HHHHHhc-CcCeEEEEeccCCCCC-CcHHHHhCCCcceEEeCCHH
Confidence 4555555 99999999994 6 89999888899999997443
No 289
>PF00072 Response_reg: Response regulator receiver domain; InterPro: IPR001789 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. Bipartite response regulator proteins are involved in a two-component signal transduction system in bacteria, and certain eukaryotes like protozoa, that functions to detect and respond to environmental changes []. These systems have been detected during host invasion, drug resistance, motility, phosphate uptake, osmoregulation, and nitrogen fixation, amongst others []. The two-component system consists of a histidine protein kinase environmental sensor that phosphorylates the receiver domain of a response regulator protein; phosphorylation induces a conformational change in the response regulator, which activates the effector domain, triggering the cellular response []. The domains of the two-component proteins are highly modular, but the core structures and activities are maintained. The response regulators act as phosphorylation-activated switches to affect a cellular response, usually by transcriptional regulation. Most of these proteins consist of two domains, an N-terminal response regulator receiver domain, and a variable C-terminal effector domain with DNA-binding activity. This entry represents the response regulator receiver domain, which belongs to the CheY family, and receives the signal from the sensor partner in the two-component system.; GO: 0000156 two-component response regulator activity, 0000160 two-component signal transduction system (phosphorelay), 0006355 regulation of transcription, DNA-dependent; PDB: 2QR3_A 2QXY_A 1I3C_A 1JLK_A 2PKX_A 2PL1_A 3H1F_A 3H1E_A 3GWG_A 3H1G_A ....
Probab=42.30 E-value=1.6e+02 Score=22.78 Aligned_cols=90 Identities=21% Similarity=0.223 Sum_probs=52.5
Q ss_pred hHHHHHHHHHHhCCC-eEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEcccCCCch-h--HHHHHHHhCCCCCcEEEE
Q 017982 205 PLSSSIEQCKSVFGH-DIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAG-T--AEEIEKHFGCQSSQLIMV 280 (363)
Q Consensus 205 ~v~e~L~~Lk~~~Gi-kl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~~~kKP~p-~--~~~alk~lgl~pee~vmV 280 (363)
...+.++.+.+..|+ .+..++|. ..+....+....+.+.....=|.. + +-+.++..+ +.-.++++
T Consensus 9 ~~~~~l~~~l~~~~~~~v~~~~~~----------~~~~~~~~~~~~d~iiid~~~~~~~~~~~~~~i~~~~-~~~~ii~~ 77 (112)
T PF00072_consen 9 EIRELLEKLLERAGYEEVTTASSG----------EEALELLKKHPPDLIIIDLELPDGDGLELLEQIRQIN-PSIPIIVV 77 (112)
T ss_dssp HHHHHHHHHHHHTTEEEEEEESSH----------HHHHHHHHHSTESEEEEESSSSSSBHHHHHHHHHHHT-TTSEEEEE
T ss_pred HHHHHHHHHHHhCCCCEEEEECCH----------HHHHHHhcccCceEEEEEeeecccccccccccccccc-ccccEEEe
Confidence 344455554446787 55555444 445455555555544423333333 2 223334444 55688888
Q ss_pred ccCCc-ccHHHHHHcCCeEEEEcCCC
Q 017982 281 GDRPF-TDIVYGNRNGFLTILTEPLS 305 (363)
Q Consensus 281 GDrL~-TDI~~A~raGi~TIlV~p~~ 305 (363)
++.-. ..+..+.++|+..++..|..
T Consensus 78 t~~~~~~~~~~~~~~g~~~~l~kp~~ 103 (112)
T PF00072_consen 78 TDEDDSDEVQEALRAGADDYLSKPFS 103 (112)
T ss_dssp ESSTSHHHHHHHHHTTESEEEESSSS
T ss_pred cCCCCHHHHHHHHHCCCCEEEECCCC
Confidence 86653 46677889999999999986
No 290
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=42.15 E-value=15 Score=33.17 Aligned_cols=14 Identities=36% Similarity=0.551 Sum_probs=12.7
Q ss_pred CCEEEEcCCceeec
Q 017982 183 FKGVVFDKDNTLTA 196 (363)
Q Consensus 183 IkaVV~DlDnTL~~ 196 (363)
+++|+||+||||..
T Consensus 2 ik~viFDldGtL~d 15 (211)
T TIGR02247 2 IKAVIFDFGGVLLP 15 (211)
T ss_pred ceEEEEecCCceec
Confidence 67999999999986
No 291
>PF09547 Spore_IV_A: Stage IV sporulation protein A (spore_IV_A); InterPro: IPR014201 This entry is designated stage IV sporulation protein A. It acts in the mother cell compartment and plays a role in spore coat morphogenesis []. A comparative genome analysis of all sequenced genomes of Firmicutes shows that the proteins are strictly conserved among the sub-set of endospore-forming species.
Probab=42.12 E-value=1.6e+02 Score=31.33 Aligned_cols=79 Identities=24% Similarity=0.319 Sum_probs=55.1
Q ss_pred CCChHHHHHcCCC---------EEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCc-cHHHHH
Q 017982 172 YIDWAELQRRGFK---------GVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDN-DASKAR 241 (363)
Q Consensus 172 ~Id~~~L~~~GIk---------aVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp-~~~~a~ 241 (363)
.|+|++-.+-|-+ ++|+--|++++.-.+..+.+.-...+++|+ +.|.+.+|+=|+.. |+.. ....++
T Consensus 126 eIPF~eAAeiGT~KVI~dHSTIGiVVTTDGSi~dipRe~Y~eAEervI~ELk-~igKPFvillNs~~--P~s~et~~L~~ 202 (492)
T PF09547_consen 126 EIPFEEAAEIGTRKVITDHSTIGIVVTTDGSITDIPRENYVEAEERVIEELK-EIGKPFVILLNSTK--PYSEETQELAE 202 (492)
T ss_pred CCCHHHHHhhcccceeccCCceeEEEecCCCccCCChHHHHHHHHHHHHHHH-HhCCCEEEEEeCCC--CCCHHHHHHHH
Confidence 4888887776655 345557888887556666666677899998 68988899989863 1111 234556
Q ss_pred HHHHHhCCeEEE
Q 017982 242 KLEGKIGIKVIR 253 (363)
Q Consensus 242 ~i~~~LGi~~I~ 253 (363)
.+.+.++++++.
T Consensus 203 eL~ekY~vpVlp 214 (492)
T PF09547_consen 203 ELEEKYDVPVLP 214 (492)
T ss_pred HHHHHhCCcEEE
Confidence 778888998765
No 292
>cd02173 ECT CTP:phosphoethanolamine cytidylyltransferase (ECT). CTP:phosphoethanolamine cytidylyltransferase (ECT) catalyzes the conversion of phosphoethanolamine to CDP-ethanolamine as part of the CDP-ethanolamine biosynthesis pathway. ECT expression in hepatocytes is localized predominantly to areas of the cytoplasm that are rich in rough endoplasmic reticulum. Several ECTs, including yeast and human ECT, have large repetitive sequences located within their N- and C-termini.
Probab=41.57 E-value=2.5e+02 Score=24.85 Aligned_cols=112 Identities=12% Similarity=0.119 Sum_probs=62.1
Q ss_pred cchhHHHHHHHHHHhCCCeEEEEeCCCC--------CCCCCccHHHHHHHHHHhC-CeEEEcccCCCchhHHHHHHHhCC
Q 017982 202 LWGPLSSSIEQCKSVFGHDIAVFSNSAG--------LYEYDNDASKARKLEGKIG-IKVIRHRVKKPAGTAEEIEKHFGC 272 (363)
Q Consensus 202 ~~p~v~e~L~~Lk~~~Gikl~IVSN~~g--------~~~~dp~~~~a~~i~~~LG-i~~I~~~~kKP~p~~~~alk~lgl 272 (363)
+.+|=.+.|++++ +.|-.++|.=+++. ..+.-+..++++.++ .+. ++.+. ...|.......+++++.
T Consensus 14 ~H~GHi~~L~~A~-~lgd~liVgV~~D~~~~~~K~~~~pi~~~~eR~~~v~-~~~~Vd~V~--v~~~~~~~~~~~~~~~~ 89 (152)
T cd02173 14 FHIGHIEFLEKAR-ELGDYLIVGVHDDQTVNEYKGSNYPIMNLHERVLSVL-ACRYVDEVV--IGAPYVITKELIEHFKI 89 (152)
T ss_pred CCHHHHHHHHHHH-HcCCEEEEEEeCcHHHHhhcCCCCCCCCHHHHHHHHH-hcCCCCEEE--ECCCCcchHHHHHHhCC
Confidence 4567778898888 56755444443321 112222345665553 333 34332 23444334567777776
Q ss_pred CCCcEEEEccCCccc--------HHHHHHcCCeEEEEc-CCCCCCchhHHHHHHHHHH
Q 017982 273 QSSQLIMVGDRPFTD--------IVYGNRNGFLTILTE-PLSLAEEPFIVRQVRKLEV 321 (363)
Q Consensus 273 ~pee~vmVGDrL~TD--------I~~A~raGi~TIlV~-p~~~~~e~~~t~~~R~lE~ 321 (363)
.+++.|++..+| ....+.+|+...... ++.++ ..+..|+++.-|.
T Consensus 90 ---d~vv~G~d~~~~~~~~~~~~~~~~~~~G~~~~v~~~~~~St-s~Ii~rI~~~~~~ 143 (152)
T cd02173 90 ---DVVVHGKTEETPDSLDGEDPYAVPKEMGIFKEIDSGSDLTT-RDIVNRIIKNRLA 143 (152)
T ss_pred ---CEEEECCCCccccccCchHHHHHHHhCCeEEEecCCCCCCH-HHHHHHHHHhHHH
Confidence 778899887554 244667888766654 33333 4455555555553
No 293
>PRK08883 ribulose-phosphate 3-epimerase; Provisional
Probab=40.96 E-value=1.8e+02 Score=27.35 Aligned_cols=88 Identities=20% Similarity=0.287 Sum_probs=51.7
Q ss_pred HHHHHcCCCEEEEc-CCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEE-
Q 017982 176 AELQRRGFKGVVFD-KDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIR- 253 (363)
Q Consensus 176 ~~L~~~GIkaVV~D-lDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~- 253 (363)
+.|.+.|++.+-+| +|+.++ .+..+-|++.+++++.....-+.+-+...++ ...++.+. ..|.+.|.
T Consensus 19 ~~l~~~g~~~lH~DvmDG~Fv--pn~tfg~~~i~~i~~~~~~~~~dvHLMv~~p--------~~~i~~~~-~~gad~i~~ 87 (220)
T PRK08883 19 EKVLAAGADVVHFDVMDNHYV--PNLTFGAPICKALRDYGITAPIDVHLMVKPV--------DRIIPDFA-KAGASMITF 87 (220)
T ss_pred HHHHHcCCCEEEEecccCccc--CccccCHHHHHHHHHhCCCCCEEEEeccCCH--------HHHHHHHH-HhCCCEEEE
Confidence 34567899999999 689987 3455567777767553101234556655553 24444444 45877654
Q ss_pred cccCCCch-hHHHHHHHhCCCC
Q 017982 254 HRVKKPAG-TAEEIEKHFGCQS 274 (363)
Q Consensus 254 ~~~kKP~p-~~~~alk~lgl~p 274 (363)
|....+.. .+...++.+|+.+
T Consensus 88 H~Ea~~~~~~~l~~ik~~g~k~ 109 (220)
T PRK08883 88 HVEASEHVDRTLQLIKEHGCQA 109 (220)
T ss_pred cccCcccHHHHHHHHHHcCCcE
Confidence 43333443 2445567778754
No 294
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=40.41 E-value=91 Score=36.06 Aligned_cols=28 Identities=21% Similarity=0.181 Sum_probs=23.9
Q ss_pred CCcchhHHHHHHHHHHhCCCeEEEEeCCC
Q 017982 200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSA 228 (363)
Q Consensus 200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~ 228 (363)
..+-|++.++++.|+ ++|+++.++|.-.
T Consensus 630 D~lq~~v~etI~~L~-~AGIkv~mlTGD~ 657 (1057)
T TIGR01652 630 DKLQEGVPETIELLR-QAGIKIWVLTGDK 657 (1057)
T ss_pred hhhhhccHHHHHHHH-HCCCeEEEEcCCc
Confidence 356789999999998 6899999999754
No 295
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=40.35 E-value=60 Score=31.56 Aligned_cols=84 Identities=15% Similarity=0.213 Sum_probs=46.2
Q ss_pred CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe-----EEE-----------cccCCCch-hH
Q 017982 201 TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK-----VIR-----------HRVKKPAG-TA 263 (363)
Q Consensus 201 ~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~-----~I~-----------~~~kKP~p-~~ 263 (363)
.+-+++.++++.|. +.++++.|+|-+- +..++.+++..|+- +|+ .+.+-|-- .+
T Consensus 90 ~LRdg~~~~f~~L~-~~~IP~lIFSAGl--------gdvI~~vL~q~~~~~~Nv~VvSN~M~Fd~~g~l~gF~~~lIH~~ 160 (246)
T PF05822_consen 90 MLRDGVEEFFDKLE-EHNIPLLIFSAGL--------GDVIEEVLRQAGVFHPNVKVVSNFMDFDEDGVLVGFKGPLIHTF 160 (246)
T ss_dssp -B-BTHHHHHHHHH-CTT--EEEEEEEE--------HHHHHHHHHHTT--BTTEEEEEE-EEE-TTSBEEEE-SS---TT
T ss_pred hhhcCHHHHHHHHH-hcCCCEEEEeCCc--------HHHHHHHHHHcCCCCCCeEEEeeeEEECCcceEeecCCCceEEe
Confidence 45677888888887 5788999998663 46666666665542 232 12333422 12
Q ss_pred ---HHHHH---Hh-C-CCCCcEEEEccCCcccHHHHHHc
Q 017982 264 ---EEIEK---HF-G-CQSSQLIMVGDRPFTDIVYGNRN 294 (363)
Q Consensus 264 ---~~alk---~l-g-l~pee~vmVGDrL~TDI~~A~ra 294 (363)
..+++ .+ . -...+++..||++ -|+.+|.-+
T Consensus 161 NKn~~~l~~~~~~~~~~~R~NvlLlGDsl-gD~~Ma~G~ 198 (246)
T PF05822_consen 161 NKNESALEDSPYFKQLKKRTNVLLLGDSL-GDLHMADGV 198 (246)
T ss_dssp -HHHHHHTTHHHHHCTTT--EEEEEESSS-GGGGTTTT-
T ss_pred eCCcccccCchHHHHhccCCcEEEecCcc-CChHhhcCC
Confidence 12331 11 2 2467899999999 799987644
No 296
>PRK11590 hypothetical protein; Provisional
Probab=40.18 E-value=21 Score=32.78 Aligned_cols=14 Identities=43% Similarity=0.487 Sum_probs=12.1
Q ss_pred CCEEEEcCCceeec
Q 017982 183 FKGVVFDKDNTLTA 196 (363)
Q Consensus 183 IkaVV~DlDnTL~~ 196 (363)
-++++||+|+||+.
T Consensus 6 ~k~~iFD~DGTL~~ 19 (211)
T PRK11590 6 RRVVFFDLDGTLHQ 19 (211)
T ss_pred ceEEEEecCCCCcc
Confidence 46899999999983
No 297
>TIGR01163 rpe ribulose-phosphate 3-epimerase. This family consists of Ribulose-phosphate 3-epimerase, also known as pentose-5-phosphate 3-epimerase (PPE). PPE converts D-ribulose 5-phosphate into D-xylulose 5-phosphate in Calvin's reductive pentose phosphate cycle. It has been found in a wide range of bacteria, archebacteria, fungi and plants.
Probab=40.02 E-value=2.8e+02 Score=24.84 Aligned_cols=116 Identities=15% Similarity=0.197 Sum_probs=60.4
Q ss_pred CccCCChH-------HHHHcCCCEEEEc-CCceeecCCCCCcchhHHHHHHHHHHhCCCe--EEEEeCCCCCCCCCccHH
Q 017982 169 DIRYIDWA-------ELQRRGFKGVVFD-KDNTLTAPYSLTLWGPLSSSIEQCKSVFGHD--IAVFSNSAGLYEYDNDAS 238 (363)
Q Consensus 169 sI~~Id~~-------~L~~~GIkaVV~D-lDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gik--l~IVSN~~g~~~~dp~~~ 238 (363)
++...|+. .+.+.|+..+-+| .|+.+.. +....++..+.+.. ..... +.+.++.. ..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~g~d~i~~~~~Dg~~~~--~~~~~~~~v~~i~~---~~~~~v~v~lm~~~~--------~~ 70 (210)
T TIGR01163 4 SILSADFARLGEEVKAVEEAGADWIHVDVMDGHFVP--NLTFGPPVLEALRK---YTDLPIDVHLMVENP--------DR 70 (210)
T ss_pred hhhcCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCC--CcccCHHHHHHHHh---cCCCcEEEEeeeCCH--------HH
Confidence 45556643 3457899999999 7887753 22344444444432 22334 34666653 23
Q ss_pred HHHHHHHHhCCeEE-EcccCCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHH--HcCCeEEEEc
Q 017982 239 KARKLEGKIGIKVI-RHRVKKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGN--RNGFLTILTE 302 (363)
Q Consensus 239 ~a~~i~~~LGi~~I-~~~~kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~--raGi~TIlV~ 302 (363)
.++.+ ...|.+.+ .|...+... .+...++.+|+.. .+++... |+....+ ..+...+++.
T Consensus 71 ~~~~~-~~~gadgv~vh~~~~~~~~~~~~~~~~~g~~~--~~~~~~~--t~~e~~~~~~~~~d~i~~~ 133 (210)
T TIGR01163 71 YIEDF-AEAGADIITVHPEASEHIHRLLQLIKDLGAKA--GIVLNPA--TPLEFLEYVLPDVDLVLLM 133 (210)
T ss_pred HHHHH-HHcCCCEEEEccCCchhHHHHHHHHHHcCCcE--EEEECCC--CCHHHHHHHHhhCCEEEEE
Confidence 34443 37788754 343333232 2334555666543 4555443 3444333 3366666653
No 298
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=39.93 E-value=23 Score=30.06 Aligned_cols=29 Identities=28% Similarity=0.433 Sum_probs=18.5
Q ss_pred EEEEcCCceeecCCCCCcchhHHHHHHHHHHhCC
Q 017982 185 GVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFG 218 (363)
Q Consensus 185 aVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~G 218 (363)
+++||+|+||... .+....+++++.++.|
T Consensus 1 ~iifD~DGTL~d~-----~~~~~~~~~~~~~~~~ 29 (154)
T TIGR01549 1 AILFDIDGTLVDS-----SFAIRRAFEETLEEFG 29 (154)
T ss_pred CeEecCCCccccc-----HHHHHHHHHHHHHHhc
Confidence 4789999999751 2445555666554444
No 299
>PF14097 SpoVAE: Stage V sporulation protein AE1
Probab=39.58 E-value=93 Score=28.87 Aligned_cols=62 Identities=16% Similarity=0.289 Sum_probs=37.3
Q ss_pred eEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEcccCCCch-hHHHHHHHhCCCCCc--EEEEccCCcc
Q 017982 220 DIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAG-TAEEIEKHFGCQSSQ--LIMVGDRPFT 286 (363)
Q Consensus 220 kl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~~~kKP~p-~~~~alk~lgl~pee--~vmVGDrL~T 286 (363)
++.++|..+. .....++...+.+|...|+...+-|.+ .-.++.+...-.|.+ .+|+.|.=+.
T Consensus 1 kVIlvTDGD~-----~A~ravE~aa~~iGgRCIS~S~GNPT~lsG~elV~lIk~a~~DPV~VMfDD~G~~ 65 (180)
T PF14097_consen 1 KVILVTDGDE-----YAKRAVEIAAKNIGGRCISQSAGNPTPLSGEELVELIKQAPHDPVLVMFDDKGFI 65 (180)
T ss_pred CEEEEECChH-----HHHHHHHHHHHHhCcEEEeccCCCCCcCCHHHHHHHHHhCCCCCEEEEEeCCCCC
Confidence 4677777752 112344666777888888766777776 235555554444443 5677776543
No 300
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=39.47 E-value=70 Score=33.95 Aligned_cols=115 Identities=22% Similarity=0.148 Sum_probs=64.8
Q ss_pred HcCCCEEEEcCCceeecCCCC----------CcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHH-hC
Q 017982 180 RRGFKGVVFDKDNTLTAPYSL----------TLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGK-IG 248 (363)
Q Consensus 180 ~~GIkaVV~DlDnTL~~~~~~----------~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~-LG 248 (363)
+...+.||+|+|+||+..+.+ -..-+|......+- +.||+|.-+|.... .+.+-.....+.+++. ..
T Consensus 372 r~n~kiVVsDiDGTITkSD~~Ghv~~miGkdwth~gVAkLYtdI~-rNGYkI~YltsR~~-Gqa~sTrsylrnieQngyk 449 (580)
T COG5083 372 RNNKKIVVSDIDGTITKSDALGHVKQMIGKDWTHNGVAKLYTDID-RNGYKIKYLTSRSY-GQADSTRSYLRNIEQNGYK 449 (580)
T ss_pred eCCCcEEEEecCCcEEehhhHHHHHHHhccchhhcchhhhhhhhc-cCceEEEEEecccc-cchhhhhhHHHhhhhcCcc
Confidence 567899999999999852222 11234444445554 46999888887752 1111112222333332 12
Q ss_pred C---eEEE------------cccCCCch---hHHHHHHHhCCCCCc-EEEEccCCcccHHHHHHcCCe
Q 017982 249 I---KVIR------------HRVKKPAG---TAEEIEKHFGCQSSQ-LIMVGDRPFTDIVYGNRNGFL 297 (363)
Q Consensus 249 i---~~I~------------~~~kKP~p---~~~~alk~lgl~pee-~vmVGDrL~TDI~~A~raGi~ 297 (363)
+ ++|. .-.+||.. ++..-++.+.+.+.- .+=+|.++ ||+..=+..|+.
T Consensus 450 LpdgpviLspd~t~aal~relIlrkpE~FKiayLndl~slf~e~~PFyAGFGNri-TDvisY~~vgIp 516 (580)
T COG5083 450 LPDGPVILSPDRTMAALYRELILRKPEVFKIAYLNDLKSLFIEFDPFYAGFGNRI-TDVISYSNVGIP 516 (580)
T ss_pred CCCCCEeeccchhhhhhhhhhhhcChHHHHHHHHHHHHHhhCcCChhhccccccc-hhheeeccccCC
Confidence 2 2331 01468875 233344455555442 23579999 999999999885
No 301
>PF14597 Lactamase_B_5: Metallo-beta-lactamase superfamily; PDB: 2P97_B.
Probab=39.24 E-value=52 Score=30.96 Aligned_cols=42 Identities=14% Similarity=0.146 Sum_probs=23.3
Q ss_pred hHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEE
Q 017982 205 PLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIR 253 (363)
Q Consensus 205 ~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~ 253 (363)
-..+.++.|...-|..-+|+||.+. ...++.+.+.+|.++..
T Consensus 42 ls~~~~~~l~a~ggv~~IvLTn~dH-------vR~A~~ya~~~~a~i~~ 83 (199)
T PF14597_consen 42 LSAHDWKHLDALGGVAWIVLTNRDH-------VRAAEDYAEQTGAKIYG 83 (199)
T ss_dssp --HHHHHHHHHTT--SEEE-SSGGG--------TTHHHHHHHS--EEEE
T ss_pred ccHHHHHHHHhcCCceEEEEeCChh-------HhHHHHHHHHhCCeeec
Confidence 3344555565445788999999973 23467888888988654
No 302
>KOG0832 consensus Mitochondrial/chloroplast ribosomal protein S2 [Translation, ribosomal structure and biogenesis]
Probab=38.46 E-value=1.7e+02 Score=28.54 Aligned_cols=100 Identities=14% Similarity=0.033 Sum_probs=55.4
Q ss_pred EEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEc----------
Q 017982 185 GVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRH---------- 254 (363)
Q Consensus 185 aVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~---------- 254 (363)
.-++|+|.|+.+ .-.+..+...+..+.|+-++|-||+.. ...++..++..|-..+..
T Consensus 82 i~IIdLdqT~~~------Lr~A~~fVa~vA~r~GiILFv~tn~~~-------~~~ve~aA~r~~gy~~~~~w~~G~lTN~ 148 (251)
T KOG0832|consen 82 IHIIDLDQTASY------LRRALNFVAHVAHRGGIILFVGTNNGF-------KDLVERAARRAGGYSHNRKWLGGLLTNA 148 (251)
T ss_pred cEEEecHHHHHH------HHHHHHHHHHHHhcCCeEEEEecCcch-------HHHHHHHHHHhcCceeeeeeccceeecc
Confidence 457899999875 233334444554455777888888852 245555555555433210
Q ss_pred ------ccC----CCchhHHHHHHHhCCCCCcEEEEccCCc--ccHHHHHHcCCeEEEEc
Q 017982 255 ------RVK----KPAGTAEEIEKHFGCQSSQLIMVGDRPF--TDIVYGNRNGFLTILTE 302 (363)
Q Consensus 255 ------~~k----KP~p~~~~alk~lgl~pee~vmVGDrL~--TDI~~A~raGi~TIlV~ 302 (363)
-.+ +|+.. ..+.....++++|=|... +-|.-|..+++.||.+-
T Consensus 149 ~~l~g~~~~~~~~~pd~~-----~f~~t~~~D~vvvln~~e~~sAilEA~K~~IPTIgIV 203 (251)
T KOG0832|consen 149 RELFGALVRKFLSLPDAL-----CFLPTLTPDLVVVLNPEENHSAILEAAKMAIPTIGIV 203 (251)
T ss_pred hhhcccccccccCCCcce-----eecccCCcceeEecCcccccHHHHHHHHhCCCeEEEe
Confidence 012 33321 111122226666666542 45777888999999874
No 303
>PRK08745 ribulose-phosphate 3-epimerase; Provisional
Probab=38.00 E-value=2.2e+02 Score=26.98 Aligned_cols=100 Identities=19% Similarity=0.266 Sum_probs=58.1
Q ss_pred CCccCCCh-------HHHHHcCCCEEEEc-CCceeecCCCCCcchhHHHHHHHH-HHhCCCeEEEEeCCCCCCCCCccHH
Q 017982 168 PDIRYIDW-------AELQRRGFKGVVFD-KDNTLTAPYSLTLWGPLSSSIEQC-KSVFGHDIAVFSNSAGLYEYDNDAS 238 (363)
Q Consensus 168 ~sI~~Id~-------~~L~~~GIkaVV~D-lDnTL~~~~~~~~~p~v~e~L~~L-k~~~Gikl~IVSN~~g~~~~dp~~~ 238 (363)
+||...|+ +.|.+.|++.+-+| +|+.++ .+..+-|++.+++++. . ..-+.+-+...++ ..
T Consensus 8 pSil~ad~~~l~~~i~~l~~~g~d~lHiDimDG~FV--PN~tfg~~~i~~lr~~~~-~~~~dvHLMv~~P--------~~ 76 (223)
T PRK08745 8 PSILSADFARLGEEVDNVLKAGADWVHFDVMDNHYV--PNLTIGPMVCQALRKHGI-TAPIDVHLMVEPV--------DR 76 (223)
T ss_pred eehhhcCHHHHHHHHHHHHHcCCCEEEEecccCccC--CCcccCHHHHHHHHhhCC-CCCEEEEeccCCH--------HH
Confidence 34555554 44567899999999 699997 3455567766666553 1 1234555555553 24
Q ss_pred HHHHHHHHhCCeEEE-cccCCCch-hHHHHHHHhCCCCCcEEE
Q 017982 239 KARKLEGKIGIKVIR-HRVKKPAG-TAEEIEKHFGCQSSQLIM 279 (363)
Q Consensus 239 ~a~~i~~~LGi~~I~-~~~kKP~p-~~~~alk~lgl~pee~vm 279 (363)
.++.+. ..|.+.|. |....+.+ .+...++++|+.+.=++-
T Consensus 77 ~i~~~~-~~gad~I~~H~Ea~~~~~~~l~~Ir~~g~k~Glaln 118 (223)
T PRK08745 77 IVPDFA-DAGATTISFHPEASRHVHRTIQLIKSHGCQAGLVLN 118 (223)
T ss_pred HHHHHH-HhCCCEEEEcccCcccHHHHHHHHHHCCCceeEEeC
Confidence 454544 35877654 44334444 344566777875544433
No 304
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=37.97 E-value=14 Score=32.75 Aligned_cols=39 Identities=18% Similarity=0.148 Sum_probs=25.5
Q ss_pred HHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCC
Q 017982 264 EEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPL 304 (363)
Q Consensus 264 ~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~ 304 (363)
.+.|+..|+ .=.++=||+..+=...|+.+|+....|...
T Consensus 136 l~~L~~~Gi--~~~i~TGD~~~~a~~~~~~lgi~~~~v~a~ 174 (215)
T PF00702_consen 136 LQELKEAGI--KVAILTGDNESTASAIAKQLGIFDSIVFAR 174 (215)
T ss_dssp HHHHHHTTE--EEEEEESSEHHHHHHHHHHTTSCSEEEEES
T ss_pred hhhhhccCc--ceeeeecccccccccccccccccccccccc
Confidence 345555566 344555898888788899999965444433
No 305
>PRK10200 putative racemase; Provisional
Probab=36.85 E-value=83 Score=29.70 Aligned_cols=45 Identities=13% Similarity=0.145 Sum_probs=31.2
Q ss_pred CCcchhHHHHHHHHHHhCCCe-EEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEE
Q 017982 200 LTLWGPLSSSIEQCKSVFGHD-IAVFSNSAGLYEYDNDASKARKLEGKIGIKVIR 253 (363)
Q Consensus 200 ~~~~p~v~e~L~~Lk~~~Gik-l~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~ 253 (363)
..+.+.+.+.++.|. +.|.+ ++|.+|.. ......+.+.+++|++.
T Consensus 58 ~~~~~~l~~~~~~L~-~~g~~~iviaCNTa--------h~~~~~l~~~~~iPii~ 103 (230)
T PRK10200 58 DKTGDILAEAALGLQ-RAGAEGIVLCTNTM--------HKVADAIESRCSLPFLH 103 (230)
T ss_pred chHHHHHHHHHHHHH-HcCCCEEEECCchH--------HHHHHHHHHhCCCCEee
Confidence 346788888888887 67876 55556765 23456677777888773
No 306
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=35.02 E-value=32 Score=30.75 Aligned_cols=11 Identities=55% Similarity=0.791 Sum_probs=9.6
Q ss_pred EEEcCCceeec
Q 017982 186 VVFDKDNTLTA 196 (363)
Q Consensus 186 VV~DlDnTL~~ 196 (363)
|+||+|+||..
T Consensus 1 viFD~DGTL~D 11 (213)
T TIGR01449 1 VLFDLDGTLVD 11 (213)
T ss_pred CeecCCCcccc
Confidence 58999999974
No 307
>PRK08005 epimerase; Validated
Probab=34.53 E-value=2.7e+02 Score=26.28 Aligned_cols=115 Identities=11% Similarity=0.037 Sum_probs=64.5
Q ss_pred HHHHHcCCCEEEEc-CCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEE-
Q 017982 176 AELQRRGFKGVVFD-KDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIR- 253 (363)
Q Consensus 176 ~~L~~~GIkaVV~D-lDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~- 253 (363)
+.|.+.|++.+-+| +|+.++. +..+-|.+.++|++.. ...+.+-+...++ ...++.+. ..|.+.|.
T Consensus 20 ~~l~~~g~d~lHiDvMDG~FVP--N~tfG~~~i~~l~~~t-~~~~DvHLMv~~P--------~~~i~~~~-~~gad~It~ 87 (210)
T PRK08005 20 TALHDAPLGSLHLDIEDTSFIN--NITFGMKTIQAVAQQT-RHPLSFHLMVSSP--------QRWLPWLA-AIRPGWIFI 87 (210)
T ss_pred HHHHHCCCCEEEEeccCCCcCC--ccccCHHHHHHHHhcC-CCCeEEEeccCCH--------HHHHHHHH-HhCCCEEEE
Confidence 45667899999999 6889873 4555677777675532 2335556655553 24454544 45777654
Q ss_pred cccCCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHH--HcCCeEEEEc---CCCC
Q 017982 254 HRVKKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGN--RNGFLTILTE---PLSL 306 (363)
Q Consensus 254 ~~~kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~--raGi~TIlV~---p~~~ 306 (363)
|...-+.+ .+...++++|....=++--+ |++..-. ..-+..|+|. |+..
T Consensus 88 H~Ea~~~~~~~l~~Ik~~G~k~GlAlnP~----Tp~~~i~~~l~~vD~VlvMsV~PGf~ 142 (210)
T PRK08005 88 HAESVQNPSEILADIRAIGAKAGLALNPA----TPLLPYRYLALQLDALMIMTSEPDGR 142 (210)
T ss_pred cccCccCHHHHHHHHHHcCCcEEEEECCC----CCHHHHHHHHHhcCEEEEEEecCCCc
Confidence 43323343 24456677787543333222 4555433 2245556554 5543
No 308
>PRK00208 thiG thiazole synthase; Reviewed
Probab=33.80 E-value=4.6e+02 Score=25.64 Aligned_cols=93 Identities=12% Similarity=0.049 Sum_probs=54.1
Q ss_pred cchhHHHHHHHHHH--hCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEc-----ccCCC--chh-HHHHHHHhC
Q 017982 202 LWGPLSSSIEQCKS--VFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRH-----RVKKP--AGT-AEEIEKHFG 271 (363)
Q Consensus 202 ~~p~v~e~L~~Lk~--~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~-----~~kKP--~p~-~~~alk~lg 271 (363)
+.|+..+.++.++. +.|+.++-+++.+ -..+++++ .+|...|.- +.+++ ++. ++.+.+..+
T Consensus 105 llpd~~~tv~aa~~L~~~Gf~vlpyc~~d--------~~~ak~l~-~~G~~~vmPlg~pIGsg~gi~~~~~i~~i~e~~~ 175 (250)
T PRK00208 105 LLPDPIETLKAAEILVKEGFVVLPYCTDD--------PVLAKRLE-EAGCAAVMPLGAPIGSGLGLLNPYNLRIIIEQAD 175 (250)
T ss_pred CCcCHHHHHHHHHHHHHCCCEEEEEeCCC--------HHHHHHHH-HcCCCEeCCCCcCCCCCCCCCCHHHHHHHHHhcC
Confidence 34566666665541 2399888455553 14444444 558776520 11222 232 244444333
Q ss_pred CCCCcEEEEccCC--cccHHHHHHcCCeEEEEcCCCCC
Q 017982 272 CQSSQLIMVGDRP--FTDIVYGNRNGFLTILTEPLSLA 307 (363)
Q Consensus 272 l~pee~vmVGDrL--~TDI~~A~raGi~TIlV~p~~~~ 307 (363)
--|++|-.+ -.|+..+..+|++.++|.....+
T Consensus 176 ----vpVIveaGI~tpeda~~AmelGAdgVlV~SAItk 209 (250)
T PRK00208 176 ----VPVIVDAGIGTPSDAAQAMELGADAVLLNTAIAV 209 (250)
T ss_pred ----CeEEEeCCCCCHHHHHHHHHcCCCEEEEChHhhC
Confidence 347777665 35899999999999999977665
No 309
>TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB. The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395).
Probab=33.71 E-value=2.6e+02 Score=26.70 Aligned_cols=75 Identities=15% Similarity=0.132 Sum_probs=42.9
Q ss_pred HHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEcccCCCchhHHHHHHHhCCCCCcEEEEccCCcccH-
Q 017982 210 IEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDI- 288 (363)
Q Consensus 210 L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~~~kKP~p~~~~alk~lgl~pee~vmVGDrL~TDI- 288 (363)
++++. .+..+.|+|+++ ... .+.+|+..+. ...+. .+.++++.. +-++..|..++.|.
T Consensus 22 l~~l~--~~~~~~v~s~~p---------~~~---~~~~~v~~~~--r~~~~-~~~~~l~~~----D~vI~gGG~l~~d~~ 80 (298)
T TIGR03609 22 LRELP--PGVEPTVLSNDP---------AET---AKLYGVEAVN--RRSLL-AVLRALRRA----DVVIWGGGSLLQDVT 80 (298)
T ss_pred HHhcC--CCCeEEEecCCh---------HHH---HhhcCceEEc--cCCHH-HHHHHHHHC----CEEEECCcccccCCc
Confidence 45553 467899999885 222 3455777552 11111 223333332 34667778787773
Q ss_pred ------------HHHHHcCCeEEEEcCCC
Q 017982 289 ------------VYGNRNGFLTILTEPLS 305 (363)
Q Consensus 289 ------------~~A~raGi~TIlV~p~~ 305 (363)
..|+..|..++++..+.
T Consensus 81 ~~~~~~~~~~~~~~a~~~~k~~~~~g~gi 109 (298)
T TIGR03609 81 SFRSLLYYLGLMRLARLFGKPVILWGQGI 109 (298)
T ss_pred ccccHHHHHHHHHHHHHcCCCEEEEeccc
Confidence 44677888887776444
No 310
>PF07213 DAP10: DAP10 membrane protein; InterPro: IPR009861 This family consists of several mammalian DAP10 membrane proteins. In activated mouse natural killer (NK) cells, the NKG2D receptor associates with two intracellular adaptors, DAP10 and DAP12, which trigger phosphatidyl inositol 3 kinase (PI3K) and Syk family protein tyrosine kinases, respectively. It has been suggested that the DAP10-PI3K pathway is sufficient to initiate NKG2D-mediated killing of target cells [].
Probab=33.19 E-value=21 Score=28.90 Aligned_cols=19 Identities=32% Similarity=0.691 Sum_probs=15.4
Q ss_pred cccccCCCCcccccccCCC
Q 017982 5 SVSAALPSSSCHYCYPVPN 23 (363)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~ 23 (363)
-+|+|.++.+|+-||||..
T Consensus 15 VaAaq~~~gscs~C~~ls~ 33 (79)
T PF07213_consen 15 VAAAQTQPGSCSGCYPLSP 33 (79)
T ss_pred HhhhcCCCCCCCCccccCH
Confidence 4567888889999999974
No 311
>TIGR02109 PQQ_syn_pqqE coenzyme PQQ biosynthesis protein E. This model describes coenzyme PQQ biosynthesis protein E, a gene required for the biosynthesis of pyrrolo-quinoline-quinone (coenzyme PQQ). PQQ is required for some glucose dehydrogenases and alcohol dehydrogenases.
Probab=32.81 E-value=2.2e+02 Score=28.10 Aligned_cols=111 Identities=11% Similarity=0.124 Sum_probs=60.6
Q ss_pred HHHHcCCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEE---
Q 017982 177 ELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIR--- 253 (363)
Q Consensus 177 ~L~~~GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~--- 253 (363)
++.+.|+..|. |+. .+.-+.+++.+.+++++ +.|+.+.|.||..... ...++.+. ..|+..|.
T Consensus 48 ~~~~~g~~~v~------~~G-GEPll~~~~~~ii~~~~-~~g~~~~l~TNG~ll~-----~e~~~~L~-~~g~~~v~iSl 113 (358)
T TIGR02109 48 QAAELGVLQLH------FSG-GEPLARPDLVELVAHAR-RLGLYTNLITSGVGLT-----EARLDALA-DAGLDHVQLSF 113 (358)
T ss_pred HHHhcCCcEEE------EeC-ccccccccHHHHHHHHH-HcCCeEEEEeCCccCC-----HHHHHHHH-hCCCCEEEEeC
Confidence 34456665553 333 44456678889999988 5799999999986321 34454444 45665332
Q ss_pred -------c-cc-CCCch---hHH--HHHHHhCCCCC-cEEEEccCCcccH----HHHHHcCCeEEEEc
Q 017982 254 -------H-RV-KKPAG---TAE--EIEKHFGCQSS-QLIMVGDRPFTDI----VYGNRNGFLTILTE 302 (363)
Q Consensus 254 -------~-~~-kKP~p---~~~--~alk~lgl~pe-e~vmVGDrL~TDI----~~A~raGi~TIlV~ 302 (363)
+ .. +.+.. .++ +.++..|+.-. .+++-.+.+ .++ ..+...|+..+.+.
T Consensus 114 dg~~~e~~d~~rg~~g~f~~v~~~i~~l~~~g~~v~v~~vv~~~N~-~~l~~~~~~~~~lg~~~i~~~ 180 (358)
T TIGR02109 114 QGVDEALADRIAGYKNAFEQKLAMARAVKAAGLPLTLNFVIHRHNI-DQIPEIIELAIELGADRVELA 180 (358)
T ss_pred cCCCHHHHHHhcCCccHHHHHHHHHHHHHhCCCceEEEEEeccCCH-HHHHHHHHHHHHcCCCEEEEE
Confidence 0 01 22211 121 23344565433 122233333 343 57888899877663
No 312
>PF04028 DUF374: Domain of unknown function (DUF374); InterPro: IPR007172 This is a bacterial domain of unknown function.
Probab=31.77 E-value=2.3e+02 Score=22.37 Aligned_cols=55 Identities=16% Similarity=0.278 Sum_probs=37.0
Q ss_pred EEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEcccCCCch-hHHHHHHHhCCCCCcEEEEccC
Q 017982 221 IAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAG-TAEEIEKHFGCQSSQLIMVGDR 283 (363)
Q Consensus 221 l~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~~~kKP~p-~~~~alk~lgl~pee~vmVGDr 283 (363)
.+++|.+. +++.+..+++.+|+..|.....|-.. .+.++++.+. +-..++|.=|-
T Consensus 13 ~~lvS~s~-------DGe~ia~~~~~~G~~~iRGSs~rgg~~Alr~~~~~lk-~G~~~~itpDG 68 (74)
T PF04028_consen 13 AALVSRSR-------DGELIARVLERFGFRTIRGSSSRGGARALREMLRALK-EGYSIAITPDG 68 (74)
T ss_pred EEEEccCc-------CHHHHHHHHHHcCCCeEEeCCCCcHHHHHHHHHHHHH-CCCeEEEeCCC
Confidence 45555543 47889999999999999754444443 4567777766 44566666654
No 313
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=30.53 E-value=51 Score=38.25 Aligned_cols=15 Identities=33% Similarity=0.521 Sum_probs=13.3
Q ss_pred CCCEEEEcCCceeec
Q 017982 182 GFKGVVFDKDNTLTA 196 (363)
Q Consensus 182 GIkaVV~DlDnTL~~ 196 (363)
-+++|+||+|+||+.
T Consensus 74 ~ikaVIFDlDGTLiD 88 (1057)
T PLN02919 74 KVSAVLFDMDGVLCN 88 (1057)
T ss_pred CCCEEEECCCCCeEe
Confidence 478999999999985
No 314
>CHL00076 chlB photochlorophyllide reductase subunit B
Probab=30.49 E-value=3.5e+02 Score=28.76 Aligned_cols=32 Identities=9% Similarity=0.147 Sum_probs=21.9
Q ss_pred CCCCCcEEEEccCCcccHHH----HHHcCCeEEEEcC
Q 017982 271 GCQSSQLIMVGDRPFTDIVY----GNRNGFLTILTEP 303 (363)
Q Consensus 271 gl~pee~vmVGDrL~TDI~~----A~raGi~TIlV~p 303 (363)
.+.-.+++++||.-. -+-. .+.+||..+.+..
T Consensus 302 ~l~Gkrv~I~gd~~~-a~~l~~~L~~ELGm~vv~~g~ 337 (513)
T CHL00076 302 NLTGKKAVVFGDATH-AASMTKILAREMGIRVSCAGT 337 (513)
T ss_pred ccCCCEEEEEcCchH-HHHHHHHHHHhCCCEEEEecC
Confidence 455578999999853 3443 2578999886643
No 315
>KOG0087 consensus GTPase Rab11/YPT3, small G protein superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=30.25 E-value=1.2e+02 Score=29.04 Aligned_cols=52 Identities=10% Similarity=0.163 Sum_probs=35.8
Q ss_pred cchhHHHHHHHHHHhC--CCeEEEEeCCCCCCCCCc-cHHHHHHHHHHhCCeEEE
Q 017982 202 LWGPLSSSIEQCKSVF--GHDIAVFSNSAGLYEYDN-DASKARKLEGKIGIKVIR 253 (363)
Q Consensus 202 ~~p~v~e~L~~Lk~~~--Gikl~IVSN~~g~~~~dp-~~~~a~~i~~~LGi~~I~ 253 (363)
.++.+..||++|+... .+.+.+|-|+.-+.+... ..+.++.+++.-|+.++.
T Consensus 101 Tfenv~rWL~ELRdhad~nivimLvGNK~DL~~lraV~te~~k~~Ae~~~l~f~E 155 (222)
T KOG0087|consen 101 TFENVERWLKELRDHADSNIVIMLVGNKSDLNHLRAVPTEDGKAFAEKEGLFFLE 155 (222)
T ss_pred HHHHHHHHHHHHHhcCCCCeEEEEeecchhhhhccccchhhhHhHHHhcCceEEE
Confidence 4678999999998533 467888899974433111 235667788888888764
No 316
>cd06595 GH31_xylosidase_XylS-like This family represents an uncharacterized glycosyl hydrolase family 31 (GH31) enzyme found in bacteria and eukaryotes that is related to the XylS xylosidase of Sulfolobus solfataricus. Alpha-xylosidases catalyze the release of an alpha-xylose residue from the non-reducing end of alpha-xyloside substrates. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=30.02 E-value=1.2e+02 Score=29.64 Aligned_cols=51 Identities=12% Similarity=0.160 Sum_probs=31.0
Q ss_pred HHHHHcCCC--EEEEcCCceee--------cC----CCCCcchhHHHHHHHHHHhCCCeEEEEeCC
Q 017982 176 AELQRRGFK--GVVFDKDNTLT--------AP----YSLTLWGPLSSSIEQCKSVFGHDIAVFSNS 227 (363)
Q Consensus 176 ~~L~~~GIk--aVV~DlDnTL~--------~~----~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~ 227 (363)
+.+++.||. ++++|.|=... .+ .+...+|+..+.+++|+ +.|+++++..+.
T Consensus 32 ~~~r~~~iP~D~i~lD~dw~~~~~~~~~~~~~~~ft~d~~~FPdp~~mi~~Lh-~~G~k~v~~v~P 96 (292)
T cd06595 32 DRFKKHNIPLDVLVIDMDWHVTDIPSKYGSGWTGYSWNRKLFPDPEKLLQDLH-DRGLKVTLNLHP 96 (292)
T ss_pred HHHHHhCCCccEEEEecccccccccccccCCcceeEEChhcCCCHHHHHHHHH-HCCCEEEEEeCC
Confidence 456667764 56667652110 00 12345788888888887 578887776654
No 317
>PF04312 DUF460: Protein of unknown function (DUF460); InterPro: IPR007408 This is an archaeal protein of unknown function.
Probab=29.97 E-value=1.5e+02 Score=26.41 Aligned_cols=68 Identities=21% Similarity=0.165 Sum_probs=44.1
Q ss_pred ccCCChHHHHHcCCC--EEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHh
Q 017982 170 IRYIDWAELQRRGFK--GVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKI 247 (363)
Q Consensus 170 I~~Id~~~L~~~GIk--aVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~L 247 (363)
|-.||+ |.. .-++|+|+.+..-.+..- -...+.++.+. +.|..++|+|.-.. .-..++++...|
T Consensus 34 IVGiDP------G~ttgiAildL~G~~l~l~S~R~-~~~~evi~~I~-~~G~PviVAtDV~p------~P~~V~Kia~~f 99 (138)
T PF04312_consen 34 IVGIDP------GTTTGIAILDLDGELLDLKSSRN-MSRSEVIEWIS-EYGKPVIVATDVSP------PPETVKKIARSF 99 (138)
T ss_pred EEEECC------CceeEEEEEecCCcEEEEEeecC-CCHHHHHHHHH-HcCCEEEEEecCCC------CcHHHHHHHHHh
Confidence 555677 765 456899998875332211 12233444555 57999999997752 237889999999
Q ss_pred CCeE
Q 017982 248 GIKV 251 (363)
Q Consensus 248 Gi~~ 251 (363)
+...
T Consensus 100 ~A~l 103 (138)
T PF04312_consen 100 NAVL 103 (138)
T ss_pred CCcc
Confidence 8653
No 318
>PF00834 Ribul_P_3_epim: Ribulose-phosphate 3 epimerase family; InterPro: IPR000056 Ribulose-phosphate 3-epimerase (5.1.3.1 from EC) (also known as pentose-5-phosphate 3-epimerase or PPE) is the enzyme that converts D-ribulose 5-phosphate into D-xylulose 5-phosphate in Calvin's reductive pentose phosphate cycle. In Ralstonia eutropha (Alcaligenes eutrophus) two copies of the gene coding for PPE are known [], one is chromosomally encoded P40117 from SWISSPROT, the other one is on a plasmid Q04539 from SWISSPROT. PPE has been found in a wide range of bacteria, archaebacteria, fungi and plants. All the proteins have from 209 to 241 amino acid residues. The enzyme has a TIM barrel structure.; GO: 0004750 ribulose-phosphate 3-epimerase activity, 0005975 carbohydrate metabolic process; PDB: 3CTL_A 3CT7_D 3CU2_A 1RPX_A 3OVR_A 3OVP_A 3OVQ_B 3QC3_B 3INP_A 1TQJ_D ....
Probab=29.70 E-value=1.2e+02 Score=28.37 Aligned_cols=131 Identities=14% Similarity=0.136 Sum_probs=68.2
Q ss_pred HHHHHcCCCEEEEc-CCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEE-
Q 017982 176 AELQRRGFKGVVFD-KDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIR- 253 (363)
Q Consensus 176 ~~L~~~GIkaVV~D-lDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~- 253 (363)
+.|.+.|+..+-+| +|++++. +..+-|...+.|++.. ..-+.+-+.+.++ ...++.+. ..|...|.
T Consensus 19 ~~l~~~g~d~lHiDiMDg~fvp--n~~~g~~~i~~i~~~~-~~~~DvHLMv~~P--------~~~i~~~~-~~g~~~i~~ 86 (201)
T PF00834_consen 19 KRLEEAGADWLHIDIMDGHFVP--NLTFGPDIIKAIRKIT-DLPLDVHLMVENP--------ERYIEEFA-EAGADYITF 86 (201)
T ss_dssp HHHHHTT-SEEEEEEEBSSSSS--SB-B-HHHHHHHHTTS-SSEEEEEEESSSG--------GGHHHHHH-HHT-SEEEE
T ss_pred HHHHHcCCCEEEEeecccccCC--cccCCHHHHHHHhhcC-CCcEEEEeeeccH--------HHHHHHHH-hcCCCEEEE
Confidence 45668999999999 6999873 4445677666665542 2334566666664 23455543 45777553
Q ss_pred cccCCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEc---CCCCCCchhHHHHHHHHHH
Q 017982 254 HRVKKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTE---PLSLAEEPFIVRQVRKLEV 321 (363)
Q Consensus 254 ~~~kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~---p~~~~~e~~~t~~~R~lE~ 321 (363)
|....+.+ .+...+++.|+.+.=++--+..+ .++.- --.-+..|+|. |+.. +..|.-..+.++++
T Consensus 87 H~E~~~~~~~~i~~ik~~g~k~GialnP~T~~-~~~~~-~l~~vD~VlvMsV~PG~~-Gq~f~~~~~~KI~~ 155 (201)
T PF00834_consen 87 HAEATEDPKETIKYIKEAGIKAGIALNPETPV-EELEP-YLDQVDMVLVMSVEPGFG-GQKFIPEVLEKIRE 155 (201)
T ss_dssp EGGGTTTHHHHHHHHHHTTSEEEEEE-TTS-G-GGGTT-TGCCSSEEEEESS-TTTS-SB--HGGHHHHHHH
T ss_pred cccchhCHHHHHHHHHHhCCCEEEEEECCCCc-hHHHH-HhhhcCEEEEEEecCCCC-cccccHHHHHHHHH
Confidence 43333443 24456677787554444333333 23322 22356677775 5543 34444444555554
No 319
>PRK13762 tRNA-modifying enzyme; Provisional
Probab=29.64 E-value=2.1e+02 Score=28.57 Aligned_cols=30 Identities=23% Similarity=0.205 Sum_probs=25.2
Q ss_pred CCCCcchhHHHHHHHHHHhCCCeEEEEeCCC
Q 017982 198 YSLTLWGPLSSSIEQCKSVFGHDIAVFSNSA 228 (363)
Q Consensus 198 ~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~ 228 (363)
...-++|.+.+.++.++ +.|+.++|+||..
T Consensus 139 GEPlL~p~l~eli~~~k-~~Gi~~~L~TNG~ 168 (322)
T PRK13762 139 GEPTLYPYLPELIEEFH-KRGFTTFLVTNGT 168 (322)
T ss_pred ccccchhhHHHHHHHHH-HcCCCEEEECCCC
Confidence 45556788999999998 5799999999995
No 320
>cd03027 GRX_DEP Glutaredoxin (GRX) family, Dishevelled, Egl-10, and Pleckstrin (DEP) subfamily; composed of uncharacterized proteins containing a GRX domain and additional domains DEP and DUF547, both of which have unknown functions. GRX is a glutathione (GSH) dependent reductase containing a redox active CXXC motif in a TRX fold. It has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. By altering the redox state of target proteins, GRX is involved in many cellular functions.
Probab=29.49 E-value=2.4e+02 Score=20.98 Aligned_cols=50 Identities=14% Similarity=0.230 Sum_probs=32.3
Q ss_pred cHHHHHHHHHHhCCeEEEcccCCCchhHHHHHHHhCCCCCcEEEEccCCc
Q 017982 236 DASKARKLEGKIGIKVIRHRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPF 285 (363)
Q Consensus 236 ~~~~a~~i~~~LGi~~I~~~~kKP~p~~~~alk~lgl~pee~vmVGDrL~ 285 (363)
.-.+++.+++..|+++......+-.....++.+..|...-=+++|||+..
T Consensus 13 ~C~ka~~~L~~~gi~~~~~di~~~~~~~~el~~~~g~~~vP~v~i~~~~i 62 (73)
T cd03027 13 DCTAVRLFLREKGLPYVEINIDIFPERKAELEERTGSSVVPQIFFNEKLV 62 (73)
T ss_pred hHHHHHHHHHHCCCceEEEECCCCHHHHHHHHHHhCCCCcCEEEECCEEE
Confidence 35788899999999976544444333334555555654446778888763
No 321
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=29.28 E-value=32 Score=29.88 Aligned_cols=15 Identities=47% Similarity=0.275 Sum_probs=12.3
Q ss_pred EEEEcCCceeecCCC
Q 017982 185 GVVFDKDNTLTAPYS 199 (363)
Q Consensus 185 aVV~DlDnTL~~~~~ 199 (363)
+++||+|+||+.+..
T Consensus 3 ~iiFD~dgTL~~~~~ 17 (188)
T TIGR01489 3 VVVSDFDGTITLNDS 17 (188)
T ss_pred EEEEeCCCcccCCCc
Confidence 578999999987644
No 322
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=29.11 E-value=31 Score=35.66 Aligned_cols=14 Identities=36% Similarity=0.676 Sum_probs=12.7
Q ss_pred CCEEEEcCCceeec
Q 017982 183 FKGVVFDKDNTLTA 196 (363)
Q Consensus 183 IkaVV~DlDnTL~~ 196 (363)
+++++||+|+||..
T Consensus 241 ~k~vIFDlDGTLiD 254 (459)
T PRK06698 241 LQALIFDMDGTLFQ 254 (459)
T ss_pred hhheeEccCCceec
Confidence 68999999999985
No 323
>PRK02102 ornithine carbamoyltransferase; Validated
Probab=29.11 E-value=6.1e+02 Score=25.57 Aligned_cols=114 Identities=14% Similarity=0.110 Sum_probs=72.6
Q ss_pred HHHHcCCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEccc
Q 017982 177 ELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRV 256 (363)
Q Consensus 177 ~L~~~GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~~~ 256 (363)
..++.|-.++.+|..+.=. . .-+.+.+.++.|. .+ +.++|+=... ...++.+.+..++|+|-...
T Consensus 67 A~~~LGg~~i~l~~~~ss~--~---kgEsl~Dt~rvls-~y-~D~iviR~~~--------~~~~~~~a~~~~vPVINa~~ 131 (331)
T PRK02102 67 AAIDLGAHVTYLGPNDSQL--G---KKESIEDTARVLG-RM-YDGIEYRGFK--------QEIVEELAKYSGVPVWNGLT 131 (331)
T ss_pred HHHHcCCCEEEcCcccccC--C---CCcCHHHHHHHHh-hc-CCEEEEECCc--------hHHHHHHHHhCCCCEEECCC
Confidence 3457799998887654322 2 2345566666665 44 3556655442 35677888888999986433
Q ss_pred CCCch--hH---HHHHHHhC-CCCCcEEEEccC----CcccHHHHHHcCCeEEEEcCCC
Q 017982 257 KKPAG--TA---EEIEKHFG-CQSSQLIMVGDR----PFTDIVYGNRNGFLTILTEPLS 305 (363)
Q Consensus 257 kKP~p--~~---~~alk~lg-l~pee~vmVGDr----L~TDI~~A~raGi~TIlV~p~~ 305 (363)
..-+| .+ ..+.+.+| ++.-.+++|||- ...-+.++...|+...++.|-.
T Consensus 132 ~~~HPtQaLaDl~Ti~e~~g~l~g~~va~vGd~~~~v~~Sl~~~~~~~g~~v~~~~P~~ 190 (331)
T PRK02102 132 DEWHPTQMLADFMTMKEHFGPLKGLKLAYVGDGRNNMANSLMVGGAKLGMDVRICAPKE 190 (331)
T ss_pred CCCChHHHHHHHHHHHHHhCCCCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEECCcc
Confidence 33334 33 34556666 677799999995 1233666778899888887644
No 324
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=28.96 E-value=29 Score=31.27 Aligned_cols=16 Identities=38% Similarity=0.457 Sum_probs=13.8
Q ss_pred CCCEEEEcCCceeecC
Q 017982 182 GFKGVVFDKDNTLTAP 197 (363)
Q Consensus 182 GIkaVV~DlDnTL~~~ 197 (363)
-+++++||+||||..+
T Consensus 3 ~~k~i~FD~d~TL~d~ 18 (229)
T COG1011 3 MIKAILFDLDGTLLDF 18 (229)
T ss_pred ceeEEEEecCCccccc
Confidence 5789999999999764
No 325
>KOG2832 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=28.80 E-value=1.7e+02 Score=30.31 Aligned_cols=90 Identities=14% Similarity=0.160 Sum_probs=59.8
Q ss_pred CEEEEcCCceeecC-------CCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCe-EEE--
Q 017982 184 KGVVFDKDNTLTAP-------YSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIK-VIR-- 253 (363)
Q Consensus 184 kaVV~DlDnTL~~~-------~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~-~I~-- 253 (363)
=++|+|+.++|+.+ +....-|++.-+|..|. .-|.|+|+|...+ ..+..+++.++=. +|.
T Consensus 190 yTLVleledvLVhpdws~~tGwRf~kRPgvD~FL~~~a--~~yEIVi~sse~g--------mt~~pl~d~lDP~g~IsYk 259 (393)
T KOG2832|consen 190 YTLVLELEDVLVHPDWSYKTGWRFKKRPGVDYFLGHLA--KYYEIVVYSSEQG--------MTVFPLLDALDPKGYISYK 259 (393)
T ss_pred ceEEEEeeeeEeccchhhhcCceeccCchHHHHHHhhc--ccceEEEEecCCc--------cchhhhHhhcCCcceEEEE
Confidence 36789999999752 12235789999999986 3579999999874 5667777776522 332
Q ss_pred --cccCCCchhHHHH--HHHhCCCCCcEEEEccCC
Q 017982 254 --HRVKKPAGTAEEI--EKHFGCQSSQLIMVGDRP 284 (363)
Q Consensus 254 --~~~kKP~p~~~~a--lk~lgl~pee~vmVGDrL 284 (363)
.++.|=..+ .++ +.+++-+++++|+|.=+.
T Consensus 260 Lfr~~t~y~~G-~HvKdls~LNRdl~kVivVd~d~ 293 (393)
T KOG2832|consen 260 LFRGATKYEEG-HHVKDLSKLNRDLQKVIVVDFDA 293 (393)
T ss_pred EecCcccccCc-cchhhhhhhccccceeEEEEccc
Confidence 222221111 233 678899999999996444
No 326
>PRK05301 pyrroloquinoline quinone biosynthesis protein PqqE; Provisional
Probab=28.59 E-value=2.9e+02 Score=27.58 Aligned_cols=109 Identities=12% Similarity=0.135 Sum_probs=59.8
Q ss_pred HHHcCCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEE----
Q 017982 178 LQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIR---- 253 (363)
Q Consensus 178 L~~~GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~---- 253 (363)
+.+.|+..|. |+. .+.-+.+++.+.+++++ +.|+.+.|.||..... ...++.+ ...|+..|.
T Consensus 58 ~~~~g~~~v~------~~G-GEPll~~~~~~il~~~~-~~g~~~~i~TNG~ll~-----~~~~~~L-~~~g~~~v~iSld 123 (378)
T PRK05301 58 ARALGALQLH------FSG-GEPLLRKDLEELVAHAR-ELGLYTNLITSGVGLT-----EARLAAL-KDAGLDHIQLSFQ 123 (378)
T ss_pred HHHcCCcEEE------EEC-CccCCchhHHHHHHHHH-HcCCcEEEECCCccCC-----HHHHHHH-HHcCCCEEEEEec
Confidence 3455665543 333 45556788889999988 5799999999986422 2444444 345655332
Q ss_pred ------cc--cCCCchhHH------HHHHHhCCCCC-cEEEEccCCccc----HHHHHHcCCeEEEEc
Q 017982 254 ------HR--VKKPAGTAE------EIEKHFGCQSS-QLIMVGDRPFTD----IVYGNRNGFLTILTE 302 (363)
Q Consensus 254 ------~~--~kKP~p~~~------~alk~lgl~pe-e~vmVGDrL~TD----I~~A~raGi~TIlV~ 302 (363)
+. .+.+. .++ +.+++.|+.-. .+++-.+.+ .+ +..+...|+..+.+.
T Consensus 124 g~~~e~~d~irg~~g-~f~~~~~~i~~l~~~g~~v~i~~vv~~~N~-~~i~~~~~~~~~lgv~~i~~~ 189 (378)
T PRK05301 124 DSDPELNDRLAGTKG-AFAKKLAVARLVKAHGYPLTLNAVIHRHNI-DQIPRIIELAVELGADRLELA 189 (378)
T ss_pred CCCHHHHHHHcCCCc-hHHHHHHHHHHHHHCCCceEEEEEeecCCH-HHHHHHHHHHHHcCCCEEEEe
Confidence 00 12221 122 23334455432 233333333 23 456788999877664
No 327
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=28.45 E-value=66 Score=31.46 Aligned_cols=31 Identities=23% Similarity=0.178 Sum_probs=20.4
Q ss_pred hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHc
Q 017982 262 TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRN 294 (363)
Q Consensus 262 ~~~~alk~lgl~pee~vmVGDrL~TDI~~A~ra 294 (363)
.++..++.-+.+ ..+++|||++ ||+.+-+.+
T Consensus 195 i~e~~~ele~~d-~sa~~VGDSI-tDv~ml~~~ 225 (315)
T COG4030 195 IMEGYCELEGID-FSAVVVGDSI-TDVKMLEAA 225 (315)
T ss_pred HHHHHHhhcCCC-cceeEecCcc-cchHHHHHh
Confidence 344444444444 4499999999 999875543
No 328
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=28.11 E-value=1.1e+02 Score=35.55 Aligned_cols=90 Identities=13% Similarity=0.197 Sum_probs=49.8
Q ss_pred cchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHH---HhCCeE----EEcccCCCchhHHHHHHHhCCCC
Q 017982 202 LWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEG---KIGIKV----IRHRVKKPAGTAEEIEKHFGCQS 274 (363)
Q Consensus 202 ~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~---~LGi~~----I~~~~kKP~p~~~~alk~lgl~p 274 (363)
+..+..+.++... ..|++++-+..+.-... .-..+.++.+ +.++++ |....-|+.. ...++.++-..
T Consensus 648 vP~dy~evl~~Yt-~~GfRVIAlA~K~L~~~---~~~~~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T--~~VI~eL~~An 721 (1140)
T KOG0208|consen 648 VPADYQEVLKEYT-HQGFRVIALASKELETS---TLQKAQKLSRDTVESNLEFLGLIVMENKLKEET--KRVIDELNRAN 721 (1140)
T ss_pred CCccHHHHHHHHH-hCCeEEEEEecCccCcc---hHHHHhhccHhhhhccceeeEEEEeeccccccc--HHHHHHHHhhc
Confidence 3456677777776 57998666555531110 1122322222 123443 2233446665 23334443333
Q ss_pred CcEEEE-ccCCcccHHHHHHcCCe
Q 017982 275 SQLIMV-GDRPFTDIVYGNRNGFL 297 (363)
Q Consensus 275 ee~vmV-GDrL~TDI~~A~raGi~ 297 (363)
=+++|+ ||++.|-|-.|++.||-
T Consensus 722 IRtVMcTGDNllTaisVakeCgmi 745 (1140)
T KOG0208|consen 722 IRTVMCTGDNLLTAISVAKECGMI 745 (1140)
T ss_pred ceEEEEcCCchheeeehhhccccc
Confidence 366665 99999999999999993
No 329
>COG0745 OmpR Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]
Probab=27.89 E-value=5.2e+02 Score=24.34 Aligned_cols=90 Identities=18% Similarity=0.196 Sum_probs=55.4
Q ss_pred HHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEcccCCCch-hHHHHHHHhC--C-CCCcEEEEc
Q 017982 206 LSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAG-TAEEIEKHFG--C-QSSQLIMVG 281 (363)
Q Consensus 206 v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~~~kKP~p-~~~~alk~lg--l-~pee~vmVG 281 (363)
+.+.|....+..||.+..+++.. .+....... .+.+.....=|.. ++ .+++.+. . ..--++|+.
T Consensus 12 i~~~l~~~L~~~g~~v~~~~~~~----------~a~~~~~~~-~dlviLD~~lP~~dG~-~~~~~iR~~~~~~~PIi~Lt 79 (229)
T COG0745 12 LAELLKEYLEEEGYEVDVAADGE----------EALEAAREQ-PDLVLLDLMLPDLDGL-ELCRRLRAKKGSGPPIIVLT 79 (229)
T ss_pred HHHHHHHHHHHCCCEEEEECCHH----------HHHHHHhcC-CCEEEEECCCCCCCHH-HHHHHHHhhcCCCCcEEEEE
Confidence 34456655557899999998773 233333333 4443334455654 33 2333333 2 222378887
Q ss_pred cC-CcccHHHHHHcCCeEEEEcCCCCC
Q 017982 282 DR-PFTDIVYGNRNGFLTILTEPLSLA 307 (363)
Q Consensus 282 Dr-L~TDI~~A~raGi~TIlV~p~~~~ 307 (363)
++ -..|...|..+|+.-.+++|....
T Consensus 80 a~~~~~d~v~gl~~GADDYl~KPf~~~ 106 (229)
T COG0745 80 ARDDEEDRVLGLEAGADDYLTKPFSPR 106 (229)
T ss_pred CCCcHHHHHHHHhCcCCeeeeCCCCHH
Confidence 66 347999999999999999999844
No 330
>TIGR00670 asp_carb_tr aspartate carbamoyltransferase. Ornithine carbamoyltransferases are in the same superfamily and form an outgroup.
Probab=27.69 E-value=6.1e+02 Score=25.10 Aligned_cols=114 Identities=21% Similarity=0.221 Sum_probs=73.2
Q ss_pred HHHHcCCCEEEEcC-CceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEcc
Q 017982 177 ELQRRGFKGVVFDK-DNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHR 255 (363)
Q Consensus 177 ~L~~~GIkaVV~Dl-DnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~~ 255 (363)
...+.|-.++.++. ... . ..+ -+.+.+..+.|. .+ ..++++=-.. ...+..+.+..++|+|-..
T Consensus 60 A~~~LGg~~i~l~~~~~s-~-~~k---gEsi~Dta~vls-~y-~D~iviR~~~--------~~~~~~~a~~s~vPVINa~ 124 (301)
T TIGR00670 60 AMKRLGGDVVNFSDSETS-S-VAK---GETLADTIKTLS-GY-SDAIVIRHPL--------EGAARLAAEVSEVPVINAG 124 (301)
T ss_pred HHHHcCCcEEEcCCCCcc-c-CCC---CcCHHHHHHHHH-Hh-CCEEEEECCc--------hhHHHHHHhhCCCCEEeCC
Confidence 45577999888876 432 2 122 244556666665 45 3555554332 2456777888899998643
Q ss_pred cC---CCchhH---HHHHHHhC-CCCCcEEEEccC-----CcccHHHHHHcCCeEEEEcCCC
Q 017982 256 VK---KPAGTA---EEIEKHFG-CQSSQLIMVGDR-----PFTDIVYGNRNGFLTILTEPLS 305 (363)
Q Consensus 256 ~k---KP~p~~---~~alk~lg-l~pee~vmVGDr-----L~TDI~~A~raGi~TIlV~p~~ 305 (363)
.+ -|-..+ ..+.+++| ++.-.+++|||- ...-+.++.+.|+...++.|-.
T Consensus 125 ~g~~~HPtQ~LaDl~Ti~e~~g~l~g~~va~vGD~~~~~v~~Sl~~~~a~~g~~v~~~~P~~ 186 (301)
T TIGR00670 125 DGSNQHPTQTLLDLYTIYEEFGRLDGLKIALVGDLKYGRTVHSLAEALTRFGVEVYLISPEE 186 (301)
T ss_pred CCCCCCcHHHHHHHHHHHHHhCCCCCCEEEEEccCCCCcHHHHHHHHHHHcCCEEEEECCcc
Confidence 32 344433 34556777 566689999996 3345788889999988888754
No 331
>PF09269 DUF1967: Domain of unknown function (DUF1967); InterPro: IPR015349 The Obg family comprises a group of ancient P-loop small G proteins (GTPases) belonging to the TRAFAC (for translation factors) class and can be subdivided into several distinct protein subfamilies []. OBG GTPases have been found in both prokaryotes and eukaryotes []. The structure of the OBG GTPase from Thermus thermophilus has been determined []. This entry represents a C-terminal domain found in certain OBG GTPases. This domain contains a four-stranded beta sheet and three alpha helices flanked by an additional beta strand. It is predominantly found in the bacterial GTP-binding protein Obg, and is functionally uncharacterised. ; GO: 0000166 nucleotide binding; PDB: 1UDX_A.
Probab=27.58 E-value=50 Score=25.59 Aligned_cols=22 Identities=18% Similarity=0.374 Sum_probs=16.0
Q ss_pred HHHHHHHhCCCCCcEEEEccCC
Q 017982 263 AEEIEKHFGCQSSQLIMVGDRP 284 (363)
Q Consensus 263 ~~~alk~lgl~pee~vmVGDrL 284 (363)
+.++|++.|+...++|.|||--
T Consensus 45 v~~~L~~~G~~~GD~V~Ig~~e 66 (69)
T PF09269_consen 45 VEKALRKAGAKEGDTVRIGDYE 66 (69)
T ss_dssp HHHHHHTTT--TT-EEEETTEE
T ss_pred HHHHHHHcCCCCCCEEEEcCEE
Confidence 4678888999999999999954
No 332
>TIGR00035 asp_race aspartate racemase.
Probab=27.47 E-value=2.2e+02 Score=26.52 Aligned_cols=44 Identities=25% Similarity=0.212 Sum_probs=29.8
Q ss_pred CcchhHHHHHHHHHHhCCCe-EEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEE
Q 017982 201 TLWGPLSSSIEQCKSVFGHD-IAVFSNSAGLYEYDNDASKARKLEGKIGIKVIR 253 (363)
Q Consensus 201 ~~~p~v~e~L~~Lk~~~Gik-l~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~ 253 (363)
.+.+.+.+.++.|. +.|.. ++|..|.. ...+..+.+.+++|++.
T Consensus 59 ~~~~~l~~~~~~L~-~~g~d~iviaCNTa--------h~~~~~l~~~~~iPii~ 103 (229)
T TIGR00035 59 RPRPILIDIAVKLE-NAGADFIIMPCNTA--------HKFAEDIQKAIGIPLIS 103 (229)
T ss_pred hHHHHHHHHHHHHH-HcCCCEEEECCccH--------HHHHHHHHHhCCCCEec
Confidence 36778888888887 57886 55555664 23355666777888773
No 333
>TIGR03595 Obg_CgtA_exten Obg family GTPase CgtA, C-terminal extension. CgtA (see model TIGR02729) is a broadly conserved member of the obg family of GTPases associated with ribosome maturation. This model represents a unique C-terminal domain found in some but not all sequences of CgtA. This region is preceded, and may be followed, by a region of low-complexity sequence.
Probab=27.45 E-value=63 Score=25.06 Aligned_cols=23 Identities=22% Similarity=0.465 Sum_probs=19.9
Q ss_pred HHHHHHHhCCCCCcEEEEccCCc
Q 017982 263 AEEIEKHFGCQSSQLIMVGDRPF 285 (363)
Q Consensus 263 ~~~alk~lgl~pee~vmVGDrL~ 285 (363)
+.++|++.|+.+..+|.|||--|
T Consensus 45 v~~~L~~~G~~~GD~V~Ig~~eF 67 (69)
T TIGR03595 45 VEDALRKAGAKDGDTVRIGDFEF 67 (69)
T ss_pred HHHHHHHcCCCCCCEEEEccEEE
Confidence 57899999999999999998543
No 334
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=27.29 E-value=4.3e+02 Score=23.25 Aligned_cols=97 Identities=12% Similarity=0.104 Sum_probs=52.3
Q ss_pred HHHHHcCCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCC--Ce--EEEEeCCCCCC-------CCCc---cHHHHH
Q 017982 176 AELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFG--HD--IAVFSNSAGLY-------EYDN---DASKAR 241 (363)
Q Consensus 176 ~~L~~~GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~G--ik--l~IVSN~~g~~-------~~dp---~~~~a~ 241 (363)
..|++.|++.++ ..-..+...+.+.++|..+.+ .| +. .++.+|..-.. ..++ ....++
T Consensus 37 ~~l~~~G~~ivy-------~TGRp~~~~~~t~~~l~~~~~-~~~~lp~g~li~~~g~~~~~~~~e~i~~~~~~~K~~~l~ 108 (157)
T smart00775 37 RDIQNNGYKILY-------LTARPIGQADRTRSYLSQIKQ-DGHNLPHGPVLLSPDRLFAALHREVISKKPEVFKIACLR 108 (157)
T ss_pred HHHHHcCCeEEE-------EcCCcHHHHHHHHHHHHHhhh-ccccCCCceEEEcCCcchhhhhcccccCCHHHHHHHHHH
Confidence 567789998763 332334445566778877642 23 32 44555553221 0111 112334
Q ss_pred HHHHHh---CCeEEEcccC-CCchhHHHHHHHhCCCCCcEEEEccC
Q 017982 242 KLEGKI---GIKVIRHRVK-KPAGTAEEIEKHFGCQSSQLIMVGDR 283 (363)
Q Consensus 242 ~i~~~L---Gi~~I~~~~k-KP~p~~~~alk~lgl~pee~vmVGDr 283 (363)
.+.+.+ +++++. +.+ .+.- -.+-+..|++++++..||-.
T Consensus 109 ~i~~~~~~~~~~f~~-~~gn~~~D--~~~y~~~gi~~~~i~~i~~~ 151 (157)
T smart00775 109 DIKSLFPPQGNPFYA-GFGNRITD--VISYSAVGIPPSRIFTINPK 151 (157)
T ss_pred HHHHhcCCCCCCEEE-EeCCCchh--HHHHHHcCCChhhEEEECCC
Confidence 444433 456653 122 2221 24667889999999999864
No 335
>TIGR00676 fadh2 5,10-methylenetetrahydrofolate reductase, prokaryotic form. This protein is an FAD-containing flavoprotein.
Probab=27.27 E-value=5.7e+02 Score=24.61 Aligned_cols=85 Identities=18% Similarity=0.269 Sum_probs=42.6
Q ss_pred CCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEc-cc-CCCchhHHH---HHHHhC
Q 017982 197 PYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRH-RV-KKPAGTAEE---IEKHFG 271 (363)
Q Consensus 197 ~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~-~~-kKP~p~~~~---alk~lg 271 (363)
+.+....+.+.+.++.|+ ..|...+-||.+++.......-..+..+.+.+|+++|.| .+ .+....++. .+..+|
T Consensus 8 P~~~~~~~~l~~~~~~l~-~~~pd~isvT~~~~~~~~~~t~~~a~~l~~~~g~~~i~Hlt~r~~n~~~l~~~L~~~~~~G 86 (272)
T TIGR00676 8 PKTDEGEENLWETVDRLS-PLDPDFVSVTYGAGGSTRDRTVRIVRRIKKETGIPTVPHLTCIGATREEIREILREYRELG 86 (272)
T ss_pred cCCchhHHHHHHHHHHHh-cCCCCEEEeccCCCCCcHHHHHHHHHHHHHhcCCCeeEEeeecCCCHHHHHHHHHHHHHCC
Confidence 344444466667777776 466566677766542211111233455555678876643 12 232223322 223445
Q ss_pred CCCCcEE-EEccCC
Q 017982 272 CQSSQLI-MVGDRP 284 (363)
Q Consensus 272 l~pee~v-mVGDrL 284 (363)
-.+++ +-||..
T Consensus 87 --i~nvL~l~GD~~ 98 (272)
T TIGR00676 87 --IRHILALRGDPP 98 (272)
T ss_pred --CCEEEEeCCCCC
Confidence 34555 667765
No 336
>PRK14804 ornithine carbamoyltransferase; Provisional
Probab=27.23 E-value=6.3e+02 Score=25.10 Aligned_cols=113 Identities=12% Similarity=0.017 Sum_probs=71.7
Q ss_pred HHHHcCCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEccc
Q 017982 177 ELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRV 256 (363)
Q Consensus 177 ~L~~~GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~~~ 256 (363)
..++.|-.++.+|....=. .. ..+.+..+.|. . +..++++=-.. ...++.+.+...+|+|-.+.
T Consensus 64 A~~~LGg~~i~l~~~~~~~--~~----~~~~dt~~vls-~-~~D~iv~R~~~--------~~~~~~~a~~~~vPVINag~ 127 (311)
T PRK14804 64 AMTEMGGHGIYLDWMASNF--QL----SDIDLEARYLS-R-NVSVIMARLKK--------HEDLLVMKNGSQVPVINGCD 127 (311)
T ss_pred HHHHcCCeEEEeCCCcccc--cc----ccHHHHHHHHH-h-cCCEEEEeCCC--------hHHHHHHHHHCCCCEEECCC
Confidence 3457799998887653211 11 23444555555 3 44666665443 24566777788999987444
Q ss_pred CCCch--hH---HHHHHHhC---CCCCcEEEEccC---CcccHHHHHHcCCeEEEEcCCC
Q 017982 257 KKPAG--TA---EEIEKHFG---CQSSQLIMVGDR---PFTDIVYGNRNGFLTILTEPLS 305 (363)
Q Consensus 257 kKP~p--~~---~~alk~lg---l~pee~vmVGDr---L~TDI~~A~raGi~TIlV~p~~ 305 (363)
+.-+| .+ ..+.+++| ++.-.+++|||. ....+.++...|+...++.|-.
T Consensus 128 ~~~HPtQaL~Dl~Ti~e~~g~~~l~g~~va~vGd~~rv~~Sl~~~~~~~G~~v~~~~P~~ 187 (311)
T PRK14804 128 NMFHPCQSLADIMTIALDSPEIPLNQKQLTYIGVHNNVVNSLIGITAALGIHLTLVTPIA 187 (311)
T ss_pred CCCChHHHHHHHHHHHHHhCCCCCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEECCCC
Confidence 44444 33 34566677 577799999993 2245778888999988888765
No 337
>cd07041 STAS_RsbR_RsbS_like Sulphate Transporter and Anti-Sigma factor antagonist domain of the "stressosome" complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation. The STAS (Sulphate Transporter and Anti-Sigma factor antagonist) domain of proteins related to RsbS and RsbR which are part of the "stressosome" complex that plays an important role in the regulation of the bacterial stress activated alternative sigma factor sigma-B. During stress conditions RsbS and RsbR are phosphorylated which leads to the release of RsbT, an activator of of the RsbU phosphatase, which in turn activates RsbV which leads to the release and activation of sigma factor B. RsbS is a single domain protein (STAS domain), while RsbR-like proteins have a well-conserved C-terminal STATS domain and a variable N-terminal domain. The STAS domain is also found in the C- terminal region of sulphate transporters and anti-anti-sigma factors.
Probab=26.95 E-value=2.6e+02 Score=22.32 Aligned_cols=59 Identities=17% Similarity=0.206 Sum_probs=33.9
Q ss_pred HcCCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeE
Q 017982 180 RRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV 251 (363)
Q Consensus 180 ~~GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~ 251 (363)
+.+.+.+++|+.++-.- +. .....+.+..++++ ..|.++.++.=+ ..+..+++..|+..
T Consensus 38 ~~~~~~vvlDls~v~~i-Ds-sg~~~l~~~~~~~~-~~g~~l~l~g~~----------~~v~~~l~~~gl~~ 96 (109)
T cd07041 38 RRRARGVIIDLTGVPVI-DS-AVARHLLRLARALR-LLGARTILTGIR----------PEVAQTLVELGIDL 96 (109)
T ss_pred HcCCCEEEEECCCCchh-cH-HHHHHHHHHHHHHH-HcCCeEEEEeCC----------HHHHHHHHHhCCCh
Confidence 45778888888765321 21 22234445556666 467666655433 45666777777653
No 338
>PRK02083 imidazole glycerol phosphate synthase subunit HisF; Provisional
Probab=26.77 E-value=5.4e+02 Score=24.19 Aligned_cols=47 Identities=13% Similarity=0.201 Sum_probs=24.0
Q ss_pred hHHHHHHHHHHhCCCeEEEEeCCC--CCCCCCccHHHHHHHHHHhCCeEEE
Q 017982 205 PLSSSIEQCKSVFGHDIAVFSNSA--GLYEYDNDASKARKLEGKIGIKVIR 253 (363)
Q Consensus 205 ~v~e~L~~Lk~~~Gikl~IVSN~~--g~~~~dp~~~~a~~i~~~LGi~~I~ 253 (363)
...++++++. ..|..-+|+|+-+ |+.. .++...++.+.+..++++|.
T Consensus 154 ~~~~~~~~~~-~~g~~~ii~~~i~~~g~~~-g~d~~~i~~~~~~~~ipvia 202 (253)
T PRK02083 154 DAVEWAKEVE-ELGAGEILLTSMDRDGTKN-GYDLELTRAVSDAVNVPVIA 202 (253)
T ss_pred CHHHHHHHHH-HcCCCEEEEcCCcCCCCCC-CcCHHHHHHHHhhCCCCEEE
Confidence 4456666665 5687767776532 2211 11233445555555566553
No 339
>COG1911 RPL30 Ribosomal protein L30E [Translation, ribosomal structure and biogenesis]
Probab=26.74 E-value=1.6e+02 Score=24.87 Aligned_cols=52 Identities=17% Similarity=0.005 Sum_probs=27.9
Q ss_pred hHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEc---------ccCCCch
Q 017982 205 PLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRH---------RVKKPAG 261 (363)
Q Consensus 205 ~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~---------~~kKP~p 261 (363)
+..++++.++.....-++|++|.+. + ..+.++..+.--++|++.+ .++||..
T Consensus 23 G~k~tiK~lk~gkaKliiiAsN~P~----~-~k~~ieyYAkLs~ipV~~y~Gt~~eLG~~cgkpf~ 83 (100)
T COG1911 23 GSKRTIKSLKLGKAKLIIIASNCPK----E-LKEDIEYYAKLSDIPVYVYEGTSVELGTVCGKPFR 83 (100)
T ss_pred ehHHHHHHHHcCCCcEEEEecCCCH----H-HHHHHHHHHHHcCCcEEEecCCceeHHhhhCCCce
Confidence 4556777776322334666667752 0 1233344444448887642 3677775
No 340
>COG1366 SpoIIAA Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) [Signal transduction mechanisms]
Probab=26.63 E-value=2.4e+02 Score=23.27 Aligned_cols=63 Identities=14% Similarity=0.195 Sum_probs=40.5
Q ss_pred HHHHcCCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEE
Q 017982 177 ELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVI 252 (363)
Q Consensus 177 ~L~~~GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I 252 (363)
.+...+.+.+++|+.++=.- +. ....-+...++.++ ..|..+++++.+ ..++.+...+|+..+
T Consensus 38 ~~~~~~~~~ivIDls~v~~~-dS-~gl~~L~~~~~~~~-~~g~~~~l~~i~----------p~v~~~~~~~gl~~~ 100 (117)
T COG1366 38 VIAASGARGLVIDLSGVDFM-DS-AGLGVLVALLKSAR-LRGVELVLVGIQ----------PEVARTLELTGLDKS 100 (117)
T ss_pred HHhcCCCcEEEEECCCCcee-ch-HHHHHHHHHHHHHH-hcCCeEEEEeCC----------HHHHHHHHHhCchhh
Confidence 44567788899998876421 11 22233444566676 578777777766 467788888888754
No 341
>PF11181 YflT: Heat induced stress protein YflT
Probab=26.25 E-value=1.9e+02 Score=23.69 Aligned_cols=38 Identities=24% Similarity=0.278 Sum_probs=27.4
Q ss_pred chhHHHHHHHHHHhCCC---eEEEEeCCCCCCCCCccHHHHHHHHHHhCCe
Q 017982 203 WGPLSSSIEQCKSVFGH---DIAVFSNSAGLYEYDNDASKARKLEGKIGIK 250 (363)
Q Consensus 203 ~p~v~e~L~~Lk~~~Gi---kl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~ 250 (363)
-.++...++.|+ ..|| .|.|+|+.. .+...+....+..
T Consensus 9 ~~E~~~~I~~L~-~~Gy~~ddI~Vva~d~---------~~~~~l~~~t~~~ 49 (103)
T PF11181_consen 9 EEEALSAIEELK-AQGYSEDDIYVVAKDK---------DRTERLADQTDTN 49 (103)
T ss_pred HHHHHHHHHHHH-HcCCCcccEEEEEcCc---------hHHHHHHHhcCCc
Confidence 357788899998 5798 599999764 4556666665554
No 342
>PF14488 DUF4434: Domain of unknown function (DUF4434)
Probab=25.94 E-value=2.2e+02 Score=25.65 Aligned_cols=54 Identities=11% Similarity=0.124 Sum_probs=32.8
Q ss_pred hHHHHHcCCCEEEEc---CCceeecCCCC-------CcchhHHHHHHHHHHhCCCeEEEEeCCCC
Q 017982 175 WAELQRRGFKGVVFD---KDNTLTAPYSL-------TLWGPLSSSIEQCKSVFGHDIAVFSNSAG 229 (363)
Q Consensus 175 ~~~L~~~GIkaVV~D---lDnTL~~~~~~-------~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g 229 (363)
+..|++.|++.||+- ..+...++... ...+-+...|+.. ++.|++|+|-.+-++
T Consensus 26 ~~~m~~~GidtlIlq~~~~~~~~~yps~~~~~~~~~~~~d~l~~~L~~A-~~~Gmkv~~Gl~~~~ 89 (166)
T PF14488_consen 26 FRAMKAIGIDTLILQWTGYGGFAFYPSKLSPGGFYMPPVDLLEMILDAA-DKYGMKVFVGLYFDP 89 (166)
T ss_pred HHHHHHcCCcEEEEEEeecCCcccCCccccCccccCCcccHHHHHHHHH-HHcCCEEEEeCCCCc
Confidence 357889999999863 33333332221 1223444445444 478999999998764
No 343
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=25.16 E-value=47 Score=32.14 Aligned_cols=31 Identities=29% Similarity=0.445 Sum_probs=21.4
Q ss_pred cCCCEEEEcCCceeecCCCCCcchhHHHHHHH
Q 017982 181 RGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQ 212 (363)
Q Consensus 181 ~GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~ 212 (363)
..+++++||+|+||. +-+..+.+.+..-|.+
T Consensus 13 ~~~~~l~FDiDdtLY-p~St~i~~~~~~nI~~ 43 (244)
T KOG3109|consen 13 PNYKCLFFDIDDTLY-PLSTGIQLMMRNNIQE 43 (244)
T ss_pred ccceEEEEecccccc-cCchhHHHHHHHHHHH
Confidence 378999999999994 4555555555544433
No 344
>PTZ00174 phosphomannomutase; Provisional
Probab=24.96 E-value=84 Score=29.50 Aligned_cols=35 Identities=14% Similarity=0.127 Sum_probs=28.4
Q ss_pred HHHHHHHhCCCCCcEEEEcc----CCcccHHHHHHcCCeEEEEc
Q 017982 263 AEEIEKHFGCQSSQLIMVGD----RPFTDIVYGNRNGFLTILTE 302 (363)
Q Consensus 263 ~~~alk~lgl~pee~vmVGD----rL~TDI~~A~raGi~TIlV~ 302 (363)
+..++++ +++++.+|| .. .||.+=+.+|..++.|.
T Consensus 193 l~~L~~~----~~eviafGD~~~~~~-NDieMl~~~~~~g~~v~ 231 (247)
T PTZ00174 193 LRHLEND----FKEIHFFGDKTFEGG-NDYEIYNDPRTIGHSVK 231 (247)
T ss_pred HHHHHhh----hhhEEEEcccCCCCC-CcHhhhhcCCCceEEeC
Confidence 4555555 699999999 66 89999998888888887
No 345
>PF04273 DUF442: Putative phosphatase (DUF442); InterPro: IPR005939 Although this domain is uncharacterised it seems likely that it performs a phosphatase function.; GO: 0016787 hydrolase activity; PDB: 2F46_A 3GXH_B 3GXG_B.
Probab=24.83 E-value=4.2e+02 Score=22.28 Aligned_cols=13 Identities=46% Similarity=0.777 Sum_probs=5.9
Q ss_pred hHHHHHcCCCEEE
Q 017982 175 WAELQRRGFKGVV 187 (363)
Q Consensus 175 ~~~L~~~GIkaVV 187 (363)
++.|++.||+.||
T Consensus 20 ~~~la~~GfktVI 32 (110)
T PF04273_consen 20 LAQLAAQGFKTVI 32 (110)
T ss_dssp HHHHHHCT--EEE
T ss_pred HHHHHHCCCcEEE
Confidence 3455566666554
No 346
>PLN02951 Molybderin biosynthesis protein CNX2
Probab=24.80 E-value=4.6e+02 Score=26.62 Aligned_cols=44 Identities=23% Similarity=0.191 Sum_probs=30.5
Q ss_pred HHHcCCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCe-EEEEeCCC
Q 017982 178 LQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHD-IAVFSNSA 228 (363)
Q Consensus 178 L~~~GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gik-l~IVSN~~ 228 (363)
+.+.|++.|. |+. ...-+.+++.+.++.+++..|+. +.|.||..
T Consensus 102 ~~~~Gv~~I~------~tG-GEPllr~dl~eli~~l~~~~gi~~i~itTNG~ 146 (373)
T PLN02951 102 FVAAGVDKIR------LTG-GEPTLRKDIEDICLQLSSLKGLKTLAMTTNGI 146 (373)
T ss_pred HHHCCCCEEE------EEC-CCCcchhhHHHHHHHHHhcCCCceEEEeeCcc
Confidence 3467887663 443 55556788888898887434774 88899985
No 347
>PRK09492 treR trehalose repressor; Provisional
Probab=24.55 E-value=5.9e+02 Score=23.86 Aligned_cols=53 Identities=17% Similarity=0.074 Sum_probs=31.0
Q ss_pred CChHHHHHcCCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCC-eEEEEeC
Q 017982 173 IDWAELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGH-DIAVFSN 226 (363)
Q Consensus 173 Id~~~L~~~GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gi-kl~IVSN 226 (363)
.+.+.|...++.+|++|.+..-...-..+-+.+...+.+.|. +.|+ ++++++.
T Consensus 130 ~~~~~l~~~~~pvv~i~~~~~~~~~V~~D~~~~~~~a~~~L~-~~G~~~I~~i~~ 183 (315)
T PRK09492 130 ITEEMLAPWQDKLVLLARDAKGFSSVCYDDEGAIKLLMQRLY-DQGHRHISYLGV 183 (315)
T ss_pred ccHHHHHhcCCCEEEEeccCCCCcEEEECcHHHHHHHHHHHH-HcCCCeEEEEcC
Confidence 344667777788888876421000001133456677788887 4686 5888753
No 348
>COG1212 KdsB CMP-2-keto-3-deoxyoctulosonic acid synthetase [Cell envelope biogenesis, outer membrane]
Probab=24.54 E-value=4.9e+02 Score=25.45 Aligned_cols=13 Identities=15% Similarity=0.424 Sum_probs=7.2
Q ss_pred HHHHHHHHHhCCe
Q 017982 238 SKARKLEGKIGIK 250 (363)
Q Consensus 238 ~~a~~i~~~LGi~ 250 (363)
.++....+.++.+
T Consensus 78 dR~~Ev~~~l~~~ 90 (247)
T COG1212 78 DRLAEVVEKLGLP 90 (247)
T ss_pred HHHHHHHHhcCCC
Confidence 4555555566554
No 349
>COG1794 RacX Aspartate racemase [Cell envelope biogenesis, outer membrane]
Probab=24.27 E-value=2.7e+02 Score=26.97 Aligned_cols=43 Identities=19% Similarity=0.255 Sum_probs=30.5
Q ss_pred cchhHHHHHHHHHHhCCCe-EEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEE
Q 017982 202 LWGPLSSSIEQCKSVFGHD-IAVFSNSAGLYEYDNDASKARKLEGKIGIKVIR 253 (363)
Q Consensus 202 ~~p~v~e~L~~Lk~~~Gik-l~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~ 253 (363)
..+-+.+..+.|. +.|-. ++|.||.. ...+..+.+..++|.+.
T Consensus 60 ~~~~L~~~a~~Le-~~GAd~i~l~~NT~--------H~~~d~iq~~~~iPllh 103 (230)
T COG1794 60 AGEILIDAAKKLE-RAGADFIVLPTNTM--------HKVADDIQKAVGIPLLH 103 (230)
T ss_pred HHHHHHHHHHHHH-hcCCCEEEEeCCcH--------HHHHHHHHHhcCCCeeh
Confidence 4455666777776 57875 66666775 36677888899999874
No 350
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=24.21 E-value=3.3e+02 Score=31.91 Aligned_cols=44 Identities=16% Similarity=0.162 Sum_probs=32.4
Q ss_pred hHHHHHHHhCCCCCcEEE-EccCCcccHHHHHHcCCe-EEEEcCCCC
Q 017982 262 TAEEIEKHFGCQSSQLIM-VGDRPFTDIVYGNRNGFL-TILTEPLSL 306 (363)
Q Consensus 262 ~~~~alk~lgl~pee~vm-VGDrL~TDI~~A~raGi~-TIlV~p~~~ 306 (363)
.++.+..++|++.+++++ +||+-.||+..-. .|+. ||-++....
T Consensus 960 AlRyL~~rwgi~l~~v~VfaGdSGntD~e~Ll-~G~~~tvi~~g~~~ 1005 (1050)
T TIGR02468 960 ALRYLFVRWGIELANMAVFVGESGDTDYEGLL-GGLHKTVILKGVVS 1005 (1050)
T ss_pred HHHHHHHHcCCChHHeEEEeccCCCCCHHHHh-CCceeEEEEecccc
Confidence 467788899999999954 9999988977653 4554 666665443
No 351
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=23.84 E-value=6e+02 Score=23.69 Aligned_cols=48 Identities=10% Similarity=0.099 Sum_probs=24.5
Q ss_pred hhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHh-CCeEE
Q 017982 204 GPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKI-GIKVI 252 (363)
Q Consensus 204 p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~L-Gi~~I 252 (363)
.....+++.++ +.|.+-+|.+...+.....+....++..++.. |+++.
T Consensus 83 ~~~~~~i~aa~-~~gv~~~V~~Ss~~~~~~~~~~~~~~~~l~~~~gi~~t 131 (285)
T TIGR03649 83 PPMIKFIDFAR-SKGVRRFVLLSASIIEKGGPAMGQVHAHLDSLGGVEYT 131 (285)
T ss_pred HHHHHHHHHHH-HcCCCEEEEeeccccCCCCchHHHHHHHHHhccCCCEE
Confidence 45666777777 57886555554432211111122334445554 77753
No 352
>COG0313 Predicted methyltransferases [General function prediction only]
Probab=23.48 E-value=6.1e+02 Score=25.18 Aligned_cols=45 Identities=24% Similarity=0.287 Sum_probs=24.4
Q ss_pred hHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEE
Q 017982 205 PLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVI 252 (363)
Q Consensus 205 ~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I 252 (363)
.....+..++ .|-.+++||....-.=.||....++. ....|++++
T Consensus 66 ~~~~li~~l~--~g~~valVSDAG~P~ISDPG~~LV~~-a~~~gi~V~ 110 (275)
T COG0313 66 KLPKLIPLLK--KGKSVALVSDAGTPLISDPGYELVRA-AREAGIRVV 110 (275)
T ss_pred HHHHHHHHHh--cCCeEEEEecCCCCcccCccHHHHHH-HHHcCCcEE
Confidence 3344455554 47789999987521113664444443 345566654
No 353
>PF01861 DUF43: Protein of unknown function DUF43; InterPro: IPR002723 This family of prokaryotic proteins have not been characterised. All the members are 350-400 amino acids long.; PDB: 2QM3_A.
Probab=23.29 E-value=1.5e+02 Score=28.77 Aligned_cols=94 Identities=15% Similarity=0.116 Sum_probs=46.2
Q ss_pred CCCchhHH---HHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEEcCCCCCCchhHHHHHHHHHHHHHH--HHHhcC
Q 017982 257 KKPAGTAE---EIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSLAEEPFIVRQVRKLEVTIVN--RWFRRG 331 (363)
Q Consensus 257 kKP~p~~~---~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV~p~~~~~e~~~t~~~R~lE~~vl~--~~~~~g 331 (363)
.+|...+. .++++..+.-.++++|||.=.|=|..|....-..|.|.... |-+...+.+..++.=+. -..-.-
T Consensus 25 ~T~eT~~~Ra~~~~~~gdL~gk~il~lGDDDLtSlA~al~~~~~~I~VvDiD---eRll~fI~~~a~~~gl~i~~~~~Dl 101 (243)
T PF01861_consen 25 ATPETTLRRAALMAERGDLEGKRILFLGDDDLTSLALALTGLPKRITVVDID---ERLLDFINRVAEEEGLPIEAVHYDL 101 (243)
T ss_dssp B-HHHHHHHHHHHHHTT-STT-EEEEES-TT-HHHHHHHHT--SEEEEE-S----HHHHHHHHHHHHHHT--EEEE---T
T ss_pred ccHHHHHHHHHHHHhcCcccCCEEEEEcCCcHHHHHHHhhCCCCeEEEEEcC---HHHHHHHHHHHHHcCCceEEEEecc
Confidence 46665432 23444457888999999988888888876666688887775 33444444444442221 000012
Q ss_pred CCCCCCCCCccccccccCCCCC
Q 017982 332 LKPISHNLLPDAMQCVKDPPSL 353 (363)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~ 353 (363)
..|-+.++.....-|+.+||+-
T Consensus 102 R~~LP~~~~~~fD~f~TDPPyT 123 (243)
T PF01861_consen 102 RDPLPEELRGKFDVFFTDPPYT 123 (243)
T ss_dssp TS---TTTSS-BSEEEE---SS
T ss_pred cccCCHHHhcCCCEEEeCCCCC
Confidence 2333467777888899999974
No 354
>PF08353 DUF1727: Domain of unknown function (DUF1727); InterPro: IPR013564 This domain of unknown function is found at the C terminus of bacterial proteins which include UDP-N-acetylmuramyl tripeptide synthase and the related Mur ligase.
Probab=23.29 E-value=97 Score=26.40 Aligned_cols=58 Identities=17% Similarity=0.204 Sum_probs=35.5
Q ss_pred ccCCChHHHHHcCCCEEEE------cCCceeecCC----CCCcchhHHHHHHH--HHHhCCCeEEEEeCC
Q 017982 170 IRYIDWAELQRRGFKGVVF------DKDNTLTAPY----SLTLWGPLSSSIEQ--CKSVFGHDIAVFSNS 227 (363)
Q Consensus 170 I~~Id~~~L~~~GIkaVV~------DlDnTL~~~~----~~~~~p~v~e~L~~--Lk~~~Gikl~IVSN~ 227 (363)
|.++||+.|.+.+++.+++ |+---|.+.. .....++..++++. .....+-++.|++|-
T Consensus 41 iWDvdFE~L~~~~i~~viv~G~Ra~DmalRLkyAGv~~~~i~v~~d~~~a~~~~~~~~~~~~~~yil~tY 110 (113)
T PF08353_consen 41 IWDVDFEKLADPNIKQVIVSGTRAEDMALRLKYAGVDEEKIIVEEDLEEALDAFLIKSDPTDKVYILATY 110 (113)
T ss_pred EeecCHHHHhcCCCCEEEEEeeeHHHHHhHeeecCcchHHeEecCCHHHHHHHHHHhcCCCCcEEEEECC
Confidence 7789999999888887765 3333343321 12235666677766 332234467887775
No 355
>PRK13361 molybdenum cofactor biosynthesis protein A; Provisional
Probab=23.14 E-value=5.3e+02 Score=25.40 Aligned_cols=44 Identities=9% Similarity=0.151 Sum_probs=29.5
Q ss_pred HHHcCCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCC-eEEEEeCCC
Q 017982 178 LQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGH-DIAVFSNSA 228 (363)
Q Consensus 178 L~~~GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gi-kl~IVSN~~ 228 (363)
+.+.|++.|.+ +. ...-+.+++.+.++++++..|+ .+.|.||..
T Consensus 57 ~~~~Gv~~I~~------tG-GEPllr~dl~~li~~i~~~~~l~~i~itTNG~ 101 (329)
T PRK13361 57 FTELGVRKIRL------TG-GEPLVRRGCDQLVARLGKLPGLEELSLTTNGS 101 (329)
T ss_pred HHHCCCCEEEE------EC-cCCCccccHHHHHHHHHhCCCCceEEEEeChh
Confidence 34578877653 32 4455667888889888743334 688999985
No 356
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=22.63 E-value=1.4e+02 Score=33.91 Aligned_cols=32 Identities=16% Similarity=0.129 Sum_probs=24.7
Q ss_pred HHHHH---HHhCCCCCcEEEEccCCcccHHHHHHcC
Q 017982 263 AEEIE---KHFGCQSSQLIMVGDRPFTDIVYGNRNG 295 (363)
Q Consensus 263 ~~~al---k~lgl~pee~vmVGDrL~TDI~~A~raG 295 (363)
++.++ +.+|..++++++|||.. ||..+=..++
T Consensus 767 l~~Ll~~~~~~g~~~d~vl~~GDD~-nDedMF~~~~ 801 (854)
T PLN02205 767 AKRLLSIMQERGMLPDFVLCIGDDR-SDEDMFEVIT 801 (854)
T ss_pred HHHHHHHHHhcCCCcccEEEEcCCc-cHHHHHHHhh
Confidence 45554 34689999999999998 8988866554
No 357
>KOG3107 consensus Predicted haloacid dehalogenase-like hydrolase (eyes absent) [General function prediction only]
Probab=22.53 E-value=3.8e+02 Score=28.13 Aligned_cols=74 Identities=15% Similarity=0.127 Sum_probs=48.0
Q ss_pred EEEEeCCCCCCCCCccHHHHHHHHHHhCCeE----EE--cccCCCchhHHHHHHHhCCCCCcEEEEccCCcccHHHHHHc
Q 017982 221 IAVFSNSAGLYEYDNDASKARKLEGKIGIKV----IR--HRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRN 294 (363)
Q Consensus 221 l~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~----I~--~~~kKP~p~~~~alk~lgl~pee~vmVGDrL~TDI~~A~ra 294 (363)
-++||+..- - -..++-++-.||.-+ |+ ...+|-. .|++|.++||- +-.-|+|||-.. --.+|+++
T Consensus 373 nVlvTttqL----i--palaKvLL~gLg~~fpiENIYSa~kiGKes-cFerI~~RFg~-K~~yvvIgdG~e-ee~aAK~l 443 (468)
T KOG3107|consen 373 NVLVTTTQL----I--PALAKVLLYGLGSSFPIENIYSATKIGKES-CFERIQSRFGR-KVVYVVIGDGVE-EEQAAKAL 443 (468)
T ss_pred EEEEeccch----h--HHHHHHHHHhcCCcccchhhhhhhhccHHH-HHHHHHHHhCC-ceEEEEecCcHH-HHHHHHhh
Confidence 466776641 1 245555555555332 22 2334433 48999999997 667889999984 57889999
Q ss_pred CCeEEEEcC
Q 017982 295 GFLTILTEP 303 (363)
Q Consensus 295 Gi~TIlV~p 303 (363)
.|...-+..
T Consensus 444 n~PfwrI~~ 452 (468)
T KOG3107|consen 444 NMPFWRISS 452 (468)
T ss_pred CCceEeecc
Confidence 997665543
No 358
>CHL00162 thiG thiamin biosynthesis protein G; Validated
Probab=22.11 E-value=7.8e+02 Score=24.37 Aligned_cols=104 Identities=9% Similarity=0.000 Sum_probs=62.5
Q ss_pred HHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEE-------cccCCCchh-HHHHHHHhCCCCCcE
Q 017982 206 LSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIR-------HRVKKPAGT-AEEIEKHFGCQSSQL 277 (363)
Q Consensus 206 v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~-------~~~kKP~p~-~~~alk~lgl~pee~ 277 (363)
+.++-+.|. +.|+.|+-.+|.| ..+.+-++..|...|. .+.+=.++. ++.+++... =-
T Consensus 126 tl~Aae~Lv-~eGF~VlPY~~~D---------~v~a~rLed~Gc~aVMPlgsPIGSg~Gl~n~~~l~~i~e~~~----vp 191 (267)
T CHL00162 126 TLKAAEFLV-KKGFTVLPYINAD---------PMLAKHLEDIGCATVMPLGSPIGSGQGLQNLLNLQIIIENAK----IP 191 (267)
T ss_pred HHHHHHHHH-HCCCEEeecCCCC---------HHHHHHHHHcCCeEEeeccCcccCCCCCCCHHHHHHHHHcCC----Cc
Confidence 344445565 5699999999996 3444455667877542 122223332 344444333 33
Q ss_pred EEEccCC--cccHHHHHHcCCeEEEEcCCCCCCchhHHHHHHHHHHHHH
Q 017982 278 IMVGDRP--FTDIVYGNRNGFLTILTEPLSLAEEPFIVRQVRKLEVTIV 324 (363)
Q Consensus 278 vmVGDrL--~TDI~~A~raGi~TIlV~p~~~~~e~~~t~~~R~lE~~vl 324 (363)
++||--+ -.|+..|..+|+..++++...-+.... ..+.+.|-..+.
T Consensus 192 VivdAGIgt~sDa~~AmElGaDgVL~nSaIakA~dP-~~mA~a~~~AV~ 239 (267)
T CHL00162 192 VIIDAGIGTPSEASQAMELGASGVLLNTAVAQAKNP-EQMAKAMKLAVQ 239 (267)
T ss_pred EEEeCCcCCHHHHHHHHHcCCCEEeecceeecCCCH-HHHHHHHHHHHH
Confidence 5555433 259999999999999999665554433 455566555554
No 359
>PRK02255 putrescine carbamoyltransferase; Provisional
Probab=22.10 E-value=8.2e+02 Score=24.66 Aligned_cols=114 Identities=12% Similarity=0.131 Sum_probs=70.7
Q ss_pred HHHHcCCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEccc
Q 017982 177 ELQRRGFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRV 256 (363)
Q Consensus 177 ~L~~~GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~~~ 256 (363)
..++.|-+++.+|.. +... .+ -+.+.+..+.|. .+ ..++++=... ...++.+.+..++|+|-...
T Consensus 63 A~~~LGg~~i~l~~~-~ss~-~k---gEsl~Dtarvls-~y-~D~iviR~~~--------~~~~~~~a~~~~vPVINa~~ 127 (338)
T PRK02255 63 AMTQLGGHAQYLAPG-QIQL-GG---HESLEDTARVLS-RL-VDIIMARVDR--------HQTVVELAKYATVPVINGMS 127 (338)
T ss_pred HHHHcCCeEEEeCcc-cccC-CC---CcCHHHHHHHHH-Hh-CcEEEEecCC--------hHHHHHHHHhCCCCEEECCC
Confidence 455779999988743 3321 22 345566666665 34 3455444332 24567788888999986433
Q ss_pred CC--CchhH---HHHHHHhC----CCCCcEEEEccC---CcccHHHHHHcCCeEEEEcCCC
Q 017982 257 KK--PAGTA---EEIEKHFG----CQSSQLIMVGDR---PFTDIVYGNRNGFLTILTEPLS 305 (363)
Q Consensus 257 kK--P~p~~---~~alk~lg----l~pee~vmVGDr---L~TDI~~A~raGi~TIlV~p~~ 305 (363)
.. |-..+ ..+.+++| ++--.+++|||- ...-+.++.+.|+...++.|-.
T Consensus 128 ~~~HPtQaLaDl~Ti~e~~g~g~~l~glkv~~vGD~~~v~~Sl~~~~~~~g~~v~~~~P~~ 188 (338)
T PRK02255 128 DYNHPTQELGDLFTMIEHLPEGKKLEDCKVVFVGDATQVCVSLMFIATKMGMDFVHFGPKG 188 (338)
T ss_pred CCCChHHHHHHHHHHHHHhCCCCCCCCCEEEEECCCchHHHHHHHHHHhCCCEEEEECCCc
Confidence 33 43333 34566774 666799999992 1134677788999988888754
No 360
>cd01981 Pchlide_reductase_B Pchlide_reductase_B: B protein of the NB protein complex of Protochlorophyllide (Pchlide)_reductase. Pchlide reductase catalyzes the reductive formation of chlorophyllide (chlide) from protochlorophyllide (pchlide) during biosynthesis of chlorophylls and bacteriochlorophylls. This group contains both the light-independent Pchlide reductase (DPOR) and light-dependent Pchlide reductase (LPOR). Angiosperms contain only LPOR, cyanobacteria, algae and gymnosperms contain both DPOR and LPOR, primitive anoxygenic photosynthetic bacteria contain only DPOR. NB is structurally similar to the FeMo protein of nitrogenase, forming an N2B2 heterotetramer. N and B are homologous to the FeMo alpha and beta subunits respectively. Also in common with nitrogenase in vitro DPOR activity requires ATP hydrolysis and dithoionite or ferredoxin as electron donor. The NB protein complex may serve as a catalytic site for Pchlide reduction similar to MoFe for nitrogen reduction.
Probab=22.00 E-value=5.4e+02 Score=26.27 Aligned_cols=91 Identities=14% Similarity=0.155 Sum_probs=45.7
Q ss_pred HHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEcccCCCchh-------HHHHHH------HhCCCC
Q 017982 208 SSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAGT-------AEEIEK------HFGCQS 274 (363)
Q Consensus 208 e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~~~kKP~p~-------~~~alk------~lgl~p 274 (363)
.+-+.|++++|++.+ ..+.-| .......++.+.+.+|++.+. ....|... +..+.. ...+..
T Consensus 227 ~~a~~L~~~~GiP~~-~~~p~G---~~~t~~~l~~i~~~~g~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~l~~~~l~g 301 (430)
T cd01981 227 SAALYLEEEFGMPSV-KITPIG---VVATARFLREIQELLGIQIIP-ELVNVEPYIDSQTRWVSQSARSSRSIDSQNLTG 301 (430)
T ss_pred HHHHHHHHHhCCCeE-eccCCC---hHHHHHHHHHHHHHhCCcccc-ccCChhHHHHhccchhhhhhhhhhhhhhccccC
Confidence 344556556787653 333332 122235566777778876321 00111111 111111 123556
Q ss_pred CcEEEEccCCcccHHH----HHHcCCeEEEEcCC
Q 017982 275 SQLIMVGDRPFTDIVY----GNRNGFLTILTEPL 304 (363)
Q Consensus 275 ee~vmVGDrL~TDI~~----A~raGi~TIlV~p~ 304 (363)
..++++||.. .-+-. .+.+||..+.+...
T Consensus 302 krv~i~g~~~-~~~~l~~~L~~elG~~vv~~~~~ 334 (430)
T cd01981 302 KRAFVFGDAT-HVAAATRILAREMGFRVVGAGTY 334 (430)
T ss_pred CeEEEEcChH-HHHHHHHHHHHHcCCEEEeccCC
Confidence 7899999854 23322 24789998876543
No 361
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=21.87 E-value=52 Score=30.48 Aligned_cols=17 Identities=29% Similarity=0.284 Sum_probs=13.3
Q ss_pred CCEEEEcCCceeecCCC
Q 017982 183 FKGVVFDKDNTLTAPYS 199 (363)
Q Consensus 183 IkaVV~DlDnTL~~~~~ 199 (363)
.+.++||+|+||+..+.
T Consensus 5 ~~la~FDfDgTLt~~ds 21 (210)
T TIGR01545 5 KRIIFFDLDGTLHQQDM 21 (210)
T ss_pred CcEEEEcCCCCCccCcc
Confidence 46789999999986433
No 362
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=21.54 E-value=1.3e+02 Score=33.22 Aligned_cols=37 Identities=14% Similarity=0.083 Sum_probs=29.1
Q ss_pred HHHHHHHhCCCCCcEEEEccCCcccHHHHHHcC--CeEEEEc
Q 017982 263 AEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNG--FLTILTE 302 (363)
Q Consensus 263 ~~~alk~lgl~pee~vmVGDrL~TDI~~A~raG--i~TIlV~ 302 (363)
+..+++ +++++.++++||.. ||+.+-..++ ..+|.|-
T Consensus 662 l~~ll~--~~~~d~vl~~GD~~-nDe~Mf~~~~~~~~~v~vG 700 (726)
T PRK14501 662 VRRLLE--AGPYDFVLAIGDDT-TDEDMFRALPETAITVKVG 700 (726)
T ss_pred HHHHHh--cCCCCEEEEECCCC-ChHHHHHhcccCceEEEEC
Confidence 456666 78899999999999 8999998764 3566664
No 363
>COG0036 Rpe Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism]
Probab=21.50 E-value=5.7e+02 Score=24.53 Aligned_cols=126 Identities=14% Similarity=0.183 Sum_probs=67.7
Q ss_pred CCccCCChH-------HHHHcCCCEEEEc-CCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHH
Q 017982 168 PDIRYIDWA-------ELQRRGFKGVVFD-KDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASK 239 (363)
Q Consensus 168 ~sI~~Id~~-------~L~~~GIkaVV~D-lDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~ 239 (363)
+||..-|+. .+.+.|.+.+-+| +|+.++ .+..+-|++.++++... ..-+.+-+.-.++ ...
T Consensus 8 pSILsaD~~~l~~el~~~~~agad~iH~DVMDghFV--PNiTfGp~~v~~l~~~t-~~p~DvHLMV~~p--------~~~ 76 (220)
T COG0036 8 PSILSADFARLGEELKALEAAGADLIHIDVMDGHFV--PNITFGPPVVKALRKIT-DLPLDVHLMVENP--------DRY 76 (220)
T ss_pred eehhhCCHhHHHHHHHHHHHcCCCEEEEeccCCCcC--CCcccCHHHHHHHhhcC-CCceEEEEecCCH--------HHH
Confidence 455556653 3447899999999 699997 46667788888776643 2334444444342 244
Q ss_pred HHHHHHHhCCeEEE-cccCCCch-hHHHHHHHhCCCCCcEEEEccCCcccHHHHHHcCCeEEEE---cCCCCC
Q 017982 240 ARKLEGKIGIKVIR-HRVKKPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILT---EPLSLA 307 (363)
Q Consensus 240 a~~i~~~LGi~~I~-~~~kKP~p-~~~~alk~lgl~pee~vmVGDrL~TDI~~A~raGi~TIlV---~p~~~~ 307 (363)
++.+.+ .|.+.|. |...-++. ...+.++..|+.+.=++-=+=.+ |..---.--+..|++ +|+...
T Consensus 77 i~~fa~-agad~It~H~E~~~~~~r~i~~Ik~~G~kaGv~lnP~Tp~--~~i~~~l~~vD~VllMsVnPGfgG 146 (220)
T COG0036 77 IEAFAK-AGADIITFHAEATEHIHRTIQLIKELGVKAGLVLNPATPL--EALEPVLDDVDLVLLMSVNPGFGG 146 (220)
T ss_pred HHHHHH-hCCCEEEEEeccCcCHHHHHHHHHHcCCeEEEEECCCCCH--HHHHHHHhhCCEEEEEeECCCCcc
Confidence 555543 4777664 43333333 23345566676554333333222 222222334455554 466533
No 364
>cd04121 Rab40 Rab40 subfamily. This subfamily contains Rab40a, Rab40b, and Rab40c, which are all highly homologous. In rat, Rab40c is localized to the perinuclear recycling compartment (PRC), and is distributed in a tissue-specific manor, with high expression in brain, heart, kidney, and testis, low expression in lung and liver, and no expression in spleen and skeletal muscle. Rab40c is highly expressed in differentiated oligodendrocytes but minimally expressed in oligodendrocyte progenitors, suggesting a role in the vesicular transport of myelin components. Unlike most other Ras-superfamily proteins, Rab40c was shown to have a much lower affinity for GTP, and an affinity for GDP that is lower than for GTP. GTPase activating proteins (GAPs) interact with GTP-bound Rab and accelerate the hydrolysis of GTP to GDP. Guanine nucleotide exchange factors (GEFs) interact with GDP-bound Rabs to promote the formation of the GTP-bound state. Rabs are further regulated by guanine nucleotide d
Probab=21.32 E-value=5.7e+02 Score=22.97 Aligned_cols=52 Identities=12% Similarity=0.096 Sum_probs=33.5
Q ss_pred chhHHHHHHHHHHh-CCCeEEEEeCCCCCCCC-CccHHHHHHHHHHhCCeEEEc
Q 017982 203 WGPLSSSIEQCKSV-FGHDIAVFSNSAGLYEY-DNDASKARKLEGKIGIKVIRH 254 (363)
Q Consensus 203 ~p~v~e~L~~Lk~~-~Gikl~IVSN~~g~~~~-dp~~~~a~~i~~~LGi~~I~~ 254 (363)
+..+..|++.+.+. .+.+++||.|+.-.... .-....++.+++..+.+++..
T Consensus 94 f~~~~~w~~~i~~~~~~~piilVGNK~DL~~~~~v~~~~~~~~a~~~~~~~~e~ 147 (189)
T cd04121 94 FDGIDRWIKEIDEHAPGVPKILVGNRLHLAFKRQVATEQAQAYAERNGMTFFEV 147 (189)
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEECccchhccCCCHHHHHHHHHHcCCEEEEe
Confidence 56677888888632 35789999999633210 012345677778888887643
No 365
>cd05014 SIS_Kpsf KpsF-like protein. KpsF is an arabinose-5-phosphate isomerase which contains SIS (Sugar ISomerase) domains. SIS domains are found in many phosphosugar isomerases and phosphosugar binding proteins. KpsF catalyzes the reversible reaction of ribulose 5-phosphate to arabinose 5-phosphate. This is the second step in the CMP-Kdo biosynthesis pathway.
Probab=21.29 E-value=1.8e+02 Score=23.82 Aligned_cols=29 Identities=14% Similarity=0.045 Sum_probs=23.5
Q ss_pred CCcchhHHHHHHHHHHhCCCeEEEEeCCCC
Q 017982 200 LTLWGPLSSSIEQCKSVFGHDIAVFSNSAG 229 (363)
Q Consensus 200 ~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g 229 (363)
..-.+++.++++.++ +.|.+++.+|++..
T Consensus 57 sG~t~~~~~~~~~a~-~~g~~vi~iT~~~~ 85 (128)
T cd05014 57 SGETDELLNLLPHLK-RRGAPIIAITGNPN 85 (128)
T ss_pred CCCCHHHHHHHHHHH-HCCCeEEEEeCCCC
Confidence 345688999999998 57999999999863
No 366
>TIGR01369 CPSaseII_lrg carbamoyl-phosphate synthase, large subunit. In several thermophilic species (Methanobacterium thermoautotrophicum, Methanococcus jannaschii, Aquifex aeolicus), the large subunit appears split, at different points, into two separate genes.
Probab=21.28 E-value=5.7e+02 Score=29.74 Aligned_cols=126 Identities=12% Similarity=0.158 Sum_probs=62.1
Q ss_pred HHHHHcCCCEEEEcCCc-eeecC----CCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCcc-HHHHHHHHHHhCC
Q 017982 176 AELQRRGFKGVVFDKDN-TLTAP----YSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDND-ASKARKLEGKIGI 249 (363)
Q Consensus 176 ~~L~~~GIkaVV~DlDn-TL~~~----~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~-~~~a~~i~~~LGi 249 (363)
..|++.|++++++|.+. |+... +.....|-..+.+.++.++.+...++.+-. +....... ......+++.+|+
T Consensus 34 kalke~G~~vi~v~~np~~~~~~~~~aD~~y~~p~~~~~v~~ii~~e~~DaIlp~~g-g~~~l~la~~l~~~~~le~~Gv 112 (1050)
T TIGR01369 34 KALKEEGYRVILVNSNPATIMTDPEMADKVYIEPLTPEAVEKIIEKERPDAILPTFG-GQTALNLAVELEESGVLEKYGV 112 (1050)
T ss_pred HHHHHcCCEEEEEecchhhccCChhcCCEEEECCCCHHHHHHHHHHhCCCEEEECCC-ChhHHHHHhhHHHHhHHHHCCC
Confidence 56778899999887664 22110 000011112234444433445554443322 10000000 0112456778898
Q ss_pred eEEEcc---cC-CCch-hHHHHHHHhCCCCCcEEEEccCCcccH-HHHHHcCCeEEEEcCCC
Q 017982 250 KVIRHR---VK-KPAG-TAEEIEKHFGCQSSQLIMVGDRPFTDI-VYGNRNGFLTILTEPLS 305 (363)
Q Consensus 250 ~~I~~~---~k-KP~p-~~~~alk~lgl~pee~vmVGDrL~TDI-~~A~raGi~TIlV~p~~ 305 (363)
+++... .. -=+. .+.+.++..|++--....|.+- .|. .++...|.. +.|+|..
T Consensus 113 ~~~G~~~~ai~~~~DK~~~k~~l~~~Gipvp~~~~v~s~--~e~~~~~~~igyP-vIVKP~~ 171 (1050)
T TIGR01369 113 EVLGTPVEAIKKAEDRELFREAMKEIGEPVPESEIAHSV--EEALAAAKEIGYP-VIVRPAF 171 (1050)
T ss_pred EEECCCHHHHHHhCCHHHHHHHHHHCCCCCCCeeecCCH--HHHHHHHHHhCCC-eEEECCC
Confidence 876310 00 0111 3567888899887777777552 233 456677864 5677654
No 367
>PLN02527 aspartate carbamoyltransferase
Probab=21.18 E-value=8.1e+02 Score=24.25 Aligned_cols=115 Identities=17% Similarity=0.185 Sum_probs=70.4
Q ss_pred HHHHcCCCEEEEcCCc-eeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEcc
Q 017982 177 ELQRRGFKGVVFDKDN-TLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHR 255 (363)
Q Consensus 177 ~L~~~GIkaVV~DlDn-TL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~~ 255 (363)
..++.|-.++.++.+. +... .+ -+.+.+..+.|. .+. .++++=... ...++.+.+...+|+|-..
T Consensus 60 A~~~LGg~~i~l~~~~~~s~~-~k---gEs~~Dta~vls-~y~-D~iviR~~~--------~~~~~~~a~~~~vPVINa~ 125 (306)
T PLN02527 60 AMKRLGGEVLTTENAGEFSSA-AK---GETLEDTIRTVE-GYS-DIIVLRHFE--------SGAARRAAATAEIPVINAG 125 (306)
T ss_pred HHHHcCCCEEEeCCCCCcccc-CC---CcCHHHHHHHHH-HhC-cEEEEECCC--------hhHHHHHHHhCCCCEEECC
Confidence 4557799999988752 3321 22 344556666665 443 455554332 2457788888899998643
Q ss_pred cC---CCchhH---HHHHHHhC-CCCCcEEEEccC-----CcccHHHHHHc-CCeEEEEcCCC
Q 017982 256 VK---KPAGTA---EEIEKHFG-CQSSQLIMVGDR-----PFTDIVYGNRN-GFLTILTEPLS 305 (363)
Q Consensus 256 ~k---KP~p~~---~~alk~lg-l~pee~vmVGDr-----L~TDI~~A~ra-Gi~TIlV~p~~ 305 (363)
.+ -|-..+ ..+.+++| ++--.+++|||- ....+.++... |+...++.|-.
T Consensus 126 ~g~~~HPtQ~LaDl~Ti~e~~g~l~g~kva~vGD~~~~rv~~Sl~~~~~~~~g~~v~~~~P~~ 188 (306)
T PLN02527 126 DGPGQHPTQALLDVYTIQREIGRLDGIKVGLVGDLANGRTVRSLAYLLAKYEDVKIYFVAPDV 188 (306)
T ss_pred CCCCCChHHHHHHHHHHHHHhCCcCCCEEEEECCCCCChhHHHHHHHHHhcCCCEEEEECCCc
Confidence 32 344433 34556677 566699999994 23345564554 89888887644
No 368
>PRK04302 triosephosphate isomerase; Provisional
Probab=21.16 E-value=6.6e+02 Score=23.22 Aligned_cols=122 Identities=11% Similarity=0.112 Sum_probs=69.9
Q ss_pred CChHHHHHcCCCEEEEcC-CceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeE
Q 017982 173 IDWAELQRRGFKGVVFDK-DNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKV 251 (363)
Q Consensus 173 Id~~~L~~~GIkaVV~Dl-DnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~ 251 (363)
+-.+.|++.|+.+++++- +.- ..++++.+.++.++ +.|+.+++.+... .+++.+ ..++..+
T Consensus 76 ~~~~~l~~~G~~~vii~~ser~-------~~~~e~~~~v~~a~-~~Gl~~I~~v~~~---------~~~~~~-~~~~~~~ 137 (223)
T PRK04302 76 ILPEAVKDAGAVGTLINHSERR-------LTLADIEAVVERAK-KLGLESVVCVNNP---------ETSAAA-AALGPDY 137 (223)
T ss_pred hHHHHHHHcCCCEEEEeccccc-------cCHHHHHHHHHHHH-HCCCeEEEEcCCH---------HHHHHH-hcCCCCE
Confidence 446889999998886542 222 23566788888887 5798777655542 344443 3456555
Q ss_pred EEc------ccCC----Cch-hHHHHHHHhC-CCCCcEEEEccCCc--ccHHHHHHcCCeEEEEcCCCCCCchhH
Q 017982 252 IRH------RVKK----PAG-TAEEIEKHFG-CQSSQLIMVGDRPF--TDIVYGNRNGFLTILTEPLSLAEEPFI 312 (363)
Q Consensus 252 I~~------~~kK----P~p-~~~~alk~lg-l~pee~vmVGDrL~--TDI~~A~raGi~TIlV~p~~~~~e~~~ 312 (363)
|.. +.++ ..+ .+.++++.+. ...+--+++|=.+. .|+..+...|+..++|-....+.+.+.
T Consensus 138 I~~~p~~~igt~~~~~~~~~~~i~~~~~~ir~~~~~~pvi~GggI~~~e~~~~~~~~gadGvlVGsa~l~~~~~~ 212 (223)
T PRK04302 138 VAVEPPELIGTGIPVSKAKPEVVEDAVEAVKKVNPDVKVLCGAGISTGEDVKAALELGADGVLLASGVVKAKDPE 212 (223)
T ss_pred EEEeCccccccCCCCCcCCHHHHHHHHHHHHhccCCCEEEEECCCCCHHHHHHHHcCCCCEEEEehHHhCCcCHH
Confidence 531 1222 122 2333333332 12233455565442 366667789999999986655555553
No 369
>PLN02580 trehalose-phosphatase
Probab=20.98 E-value=1.4e+02 Score=30.81 Aligned_cols=40 Identities=23% Similarity=0.137 Sum_probs=29.7
Q ss_pred hHHHHHHHhCCCCCc---EEEEccCCcccHHHHHHc----CCeEEEEc
Q 017982 262 TAEEIEKHFGCQSSQ---LIMVGDRPFTDIVYGNRN----GFLTILTE 302 (363)
Q Consensus 262 ~~~~alk~lgl~pee---~vmVGDrL~TDI~~A~ra----Gi~TIlV~ 302 (363)
+++.+++.+|++..+ .++|||.. ||..+=..+ +-.+|.|.
T Consensus 305 Av~~Ll~~~g~~~~d~~~pi~iGDD~-TDedmF~~L~~~~~G~~I~Vg 351 (384)
T PLN02580 305 AVEFLLESLGLSNCDDVLPIYIGDDR-TDEDAFKVLREGNRGYGILVS 351 (384)
T ss_pred HHHHHHHhcCCCcccceeEEEECCCc-hHHHHHHhhhccCCceEEEEe
Confidence 368899999987663 38999998 999886642 23567775
No 370
>PTZ00170 D-ribulose-5-phosphate 3-epimerase; Provisional
Probab=20.92 E-value=4.7e+02 Score=24.54 Aligned_cols=95 Identities=15% Similarity=0.141 Sum_probs=48.4
Q ss_pred CCccCCCh-------HHHHHcCCCEEEEc-CCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHH
Q 017982 168 PDIRYIDW-------AELQRRGFKGVVFD-KDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASK 239 (363)
Q Consensus 168 ~sI~~Id~-------~~L~~~GIkaVV~D-lDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~ 239 (363)
++|...|+ +.|.+.|++.+-+| +|++++. +...-+.+.++|+..-...-+.+-+.++++ ...
T Consensus 11 pSi~~~d~~~l~~~~~~l~~~~~~~~H~DimDg~fvp--n~~~G~~~v~~lr~~~~~~~lDvHLm~~~p--------~~~ 80 (228)
T PTZ00170 11 PSILAADFSKLADEAQDVLSGGADWLHVDVMDGHFVP--NLSFGPPVVKSLRKHLPNTFLDCHLMVSNP--------EKW 80 (228)
T ss_pred hhHhhcCHHHHHHHHHHHHHcCCCEEEEecccCccCC--CcCcCHHHHHHHHhcCCCCCEEEEECCCCH--------HHH
Confidence 34555554 34567899999999 5888863 223344444444332100012334444443 233
Q ss_pred HHHHHHHhCCeEEE-cccCCCc-h-hHHHHHHHhCCC
Q 017982 240 ARKLEGKIGIKVIR-HRVKKPA-G-TAEEIEKHFGCQ 273 (363)
Q Consensus 240 a~~i~~~LGi~~I~-~~~kKP~-p-~~~~alk~lgl~ 273 (363)
+ ......|.+.+. |....+. . .....++.+|..
T Consensus 81 i-~~~~~~Gad~itvH~ea~~~~~~~~l~~ik~~G~~ 116 (228)
T PTZ00170 81 V-DDFAKAGASQFTFHIEATEDDPKAVARKIREAGMK 116 (228)
T ss_pred H-HHHHHcCCCEEEEeccCCchHHHHHHHHHHHCCCe
Confidence 3 444456887653 4333333 2 233455567753
No 371
>TIGR03471 HpnJ hopanoid biosynthesis associated radical SAM protein HpnJ. One of the well-described hopanoid intermediates is bacteriohopanetetrol. In the conversion from hopene several reactions must occur in the side chain for which a radical mechanism might be reasonable. These include the four (presumably anaerobic) hydroxylations and a methyl shift.
Probab=20.10 E-value=9.5e+02 Score=24.83 Aligned_cols=107 Identities=16% Similarity=0.172 Sum_probs=58.6
Q ss_pred CCCEEEEcCCceeecCCCCCcchhHHHHHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEE--------
Q 017982 182 GFKGVVFDKDNTLTAPYSLTLWGPLSSSIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIR-------- 253 (363)
Q Consensus 182 GIkaVV~DlDnTL~~~~~~~~~p~v~e~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~-------- 253 (363)
|++.+.|+ |+++.. ..+.+.+.++.++ +.|+...+-+... .+ ...+ ..++..|...+.
T Consensus 245 ~~~~i~f~-Dd~f~~-----~~~~~~~l~~~l~-~~~i~~~~~~~~~----~~--~e~l-~~l~~aG~~~v~iGiES~s~ 310 (472)
T TIGR03471 245 EVREFFFD-DDTFTD-----DKPRAEEIARKLG-PLGVTWSCNARAN----VD--YETL-KVMKENGLRLLLVGYESGDQ 310 (472)
T ss_pred CCcEEEEe-CCCCCC-----CHHHHHHHHHHHh-hcCceEEEEecCC----CC--HHHH-HHHHHcCCCEEEEcCCCCCH
Confidence 78888774 455532 1245566677776 4676554433221 12 2333 344556776543
Q ss_pred ---cccCCCch--hH---HHHHHHhCCCCCcEEEEc---cCC---cccHHHHHHcCCeEEEEc
Q 017982 254 ---HRVKKPAG--TA---EEIEKHFGCQSSQLIMVG---DRP---FTDIVYGNRNGFLTILTE 302 (363)
Q Consensus 254 ---~~~kKP~p--~~---~~alk~lgl~pee~vmVG---DrL---~TDI~~A~raGi~TIlV~ 302 (363)
...+|... .+ .+.+++.|+...-.+||| ++. ...+..+.+.+...+.+.
T Consensus 311 ~~L~~~~K~~~~~~~~~~i~~~~~~Gi~v~~~~IiGlPget~e~~~~ti~~~~~l~~~~~~~~ 373 (472)
T TIGR03471 311 QILKNIKKGLTVEIARRFTRDCHKLGIKVHGTFILGLPGETRETIRKTIDFAKELNPHTIQVS 373 (472)
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHCCCeEEEEEEEeCCCCCHHHHHHHHHHHHhcCCCceeee
Confidence 13455543 12 245566788877778888 222 233566777887665554
No 372
>PRK11091 aerobic respiration control sensor protein ArcB; Provisional
Probab=20.00 E-value=7.4e+02 Score=27.04 Aligned_cols=87 Identities=13% Similarity=0.109 Sum_probs=47.3
Q ss_pred HHHHHHHhCCCeEEEEeCCCCCCCCCccHHHHHHHHHHhCCeEEEcccCCCch-hHH--HHHHHhCCCC--CcEEEEccC
Q 017982 209 SIEQCKSVFGHDIAVFSNSAGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAG-TAE--EIEKHFGCQS--SQLIMVGDR 283 (363)
Q Consensus 209 ~L~~Lk~~~Gikl~IVSN~~g~~~~dp~~~~a~~i~~~LGi~~I~~~~kKP~p-~~~--~alk~lgl~p--ee~vmVGDr 283 (363)
.+..+.+..|+.+.+++|. ..+-.....-..+.|.....-|.. +++ ..++...-.+ --++++...
T Consensus 540 ~l~~~L~~~g~~v~~a~~~----------~eal~~~~~~~~Dlvl~D~~mp~~~G~e~~~~ir~~~~~~~~~~ii~~ta~ 609 (779)
T PRK11091 540 VARSVLEKLGNSVDVAMTG----------KEALEMFDPDEYDLVLLDIQLPDMTGLDIARELRERYPREDLPPLVALTAN 609 (779)
T ss_pred HHHHHHHHcCCEEEEECCH----------HHHHHHhhcCCCCEEEEcCCCCCCCHHHHHHHHHhccccCCCCcEEEEECC
Confidence 4444433578877766554 223222333334445444455654 332 2222222101 246667665
Q ss_pred CcccHHHHHHcCCeEEEEcCCC
Q 017982 284 PFTDIVYGNRNGFLTILTEPLS 305 (363)
Q Consensus 284 L~TDI~~A~raGi~TIlV~p~~ 305 (363)
...+...+..+|+..++.+|..
T Consensus 610 ~~~~~~~~~~~G~~~~l~KP~~ 631 (779)
T PRK11091 610 VLKDKKEYLDAGMDDVLSKPLS 631 (779)
T ss_pred chHhHHHHHHCCCCEEEECCCC
Confidence 5567777889999999999876
Done!