Citrus Sinensis ID: 017984

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360---
Protein Sequence
MDIVTPLIARQRYAAVVNGTGTASVYAFGECMKDLSPNDCNLCFAQCKTQVLKCLPFQLATRGGRVFYDGCYLRYDDYDFFNESLSSQDRTVCGSKDFGGNNTVFGANAIELVRNLSVQAVKNDGFFVGSVTFSKGNVSVHGLAQCWEFVNGSACENCLENAVSRIASCTQKEEGRVLNAGCYLRYSTQRFYNNSGPDPVPGNGGDNKLAVILATSAVALLLVFSLVAFFVRRKLLQKRRERKQLGALQVAVNKSKLNFSYETLEKATNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQSLLDNLFDKMLSP
Secondary Structure (PSIPRED)
ccccccccccccEEEEEcccccccEEEEEEccccccHHHHHHHHHHHHHHHHHHcccccccccEEEEEccEEEEEcccccccccccccccEEEccccccccHHHHHHHHHHHHHHHHHHHHcccccEEEEEEcccccccEEEEEEccccccHHHHHHHHHHHHHHHHHcccccccEEEccEEEEEEccccccccccccccccccccccEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHccccccccHHHHHHHHcccccccccccccccccEEEEcccccEEEEEEccccccHHHHHHHHHHHHHHcccccccccEEccccccccEEEEEEEccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccEEccccccccEEEEEEEEcccccHHHHHHHHHHHHHHHHHHccccccccEEEEEEccEEEEEccccHHccccccccEEEEccccccccHHHHHHHHHHHHHHHHHHHHcccccEEEEccccccccEEEEEEEEcccccHHHHHHHHHHHHHHcHHHccccccEEEcccEEEEEEEEcccccccccccccccccccEEEEEEHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccEEcHHHHHHHHccccHHccccccccccEEccEcccccEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHEEcccccEEEEEEEcccccccEEEEcccccc
Coil and Loop (DISEMBL)
MDIVTPLIARQRYAAVVNGTGTASVYAFgecmkdlspndcnlcfaqcktqvlkclpfqlatrggrvfydgcylryddydffneslssqdrtvcgskdfggnntvfGANAIELVRNLSVqavkndgfFVGSVTfskgnvsvhgLAQCWEfvngsaceNCLENAVSRIASCtqkeegrvlnagCYLRYstqrfynnsgpdpvpgnggdnKLAVILATSAVALLLVFSLVAFFVRRKLLQKRRERKQLGALQVAVNKSKLNFSYETLEKATNyfhesnklgqggsgsvykgtlpggeaVAVKRLFYNTTQWVDHFFNEvnlisginhKNLVKLLgcsitgpesllvyefvpnqslldnlfdkmlsp
Flexible Loop (DISEMBL)
mdivtpliarqryaavVNGTGTASVYAFGECMKDLSPNDCNLCFAQCKTQVLKCLPFQLATRGGRVFYDGCYLRYDDYDFFNESLSSQDRTVCGSKDFGGNNTVFGANAIELVRNLSVQAVKNDGFFVGSVTFSKGNVSVHGLAQCWEFVNGSACENCLENAVSRIASctqkeegrvlNAGCYLRYSTQRFYNNSGPDPVPGNGGDNKLAVILATSAVALLLVFSLVAFFVRRKLLQKRRerkqlgalqvavnksklnFSYETLEKATNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQSLLDNLFDKMLSP
Low Complexity Region (SEG)
MDIVTPLIARQRYAAVVNGTGTASVYAFGECMKDLSPNDCNLCFAQCKTQVLKCLPFQLATRGGRVFYDGCYLRYDDYDFFNESLSSQDRTVCGSKDFGGNNTVFGANAIELVRNLSVQAVKNDGFFVGSVTFSKGNVSVHGLAQCWEFVNGSACENCLENAVSRIASCTQKEEGRVLNAGCYLRYSTQRFYnnsgpdpvpgnggdnKlavilatsavalllvfslvaffvrrkllqkrrerkqlGALQVAVNKSKLNFSYETLEKATNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQSLLDNLFDKMLSP
Disordered region (IsUnstruct)
**IVTPLIARQRYAAVVNGTGTASVYAFGECMKDLSPNDCNLCFAQCKTQVLKCLPFQLATRGGRVFYDGCYLRYDDYDFFNESLSSQDRTVCGSKDFGGNNTVFGANAIELVRNLSVQAVKNDGFFVGSVTFSKGNVSVHGLAQCWEFVNGSACENCLENAVSRIASCTQKEEGRVLNAGCYLRYSTQRFYNN***********DNKLAVILATSAVALLLVFSLVAFFVRRKLLQKRRERKQLGALQVAVNKSKLNFSYETLEKATNYFHESNKLG*GGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQSLLDNLF******
Disordered Region (DISOPRED)
******LIARQRYAAVVNGTGTASVYAFGECMKDLSPNDCNLCFAQCKTQVLKCLPFQLATRGGRVFYDGCYLRYDDYDFFNESLSSQDRTVCGSKDFGGNNTVFGANAIELVRNLSVQAVKNDGFFVGSVTFSKGNVSVHGLAQCWEFVNGSACENCLENAVSRIASCTQKEEGRVLNAGCYLRYSTQRFY********************LATSAVALLLVFSLVAFFVRRKLLQ******************KLNFSYETLEKATNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQSLLDNLFDKML**
Disordered Region (DISEMBL)
MDIVTPLIARQRYAAVVNGTGTASVYAFGECMKDLSPNDCNLCFAQCKTQVLKCLPFQLATRGGRVFYDGCYLRYDDYDFFNESLSSQDRTVCGSKDFGGNNTVFGANAIELVRNLSVQAVKNDGFFVGSVTFSKGNVSVHGLAQCWEFVNGSACENCLENAVSRIASCTQKEEGRVLNAGCYLRYSTQRFYNNSGPDPVPGNGGDNKLAVILATSAVALLLVFSLVAFFVRRKLLQKRRERKQLGALQVAVNKSKLNFSYETLEKATNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQSLLDNLFDKMLSP
Disordered Region (DISPRO)
*********RQRYAAVVNGTGTASVYAFGECMKDLSPNDCNLCFAQCKTQVLKCLPFQLATRGGRVFYDGCYLRYDDYDFFNESLSSQDRTVCGSKDFGGNNTVFGANAIELVRNLSVQAVKNDGFFVGSVTFSKGNVSVHGLAQCWEFVNGSACENCLENAVSRIASCTQKEEGRVLNAGCYLRYSTQRFYNNSGP********DNKLAVILATSAVALLLVFSLVAFFVRRKLLQ****************KSKLNFSYETLEKATNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQSLLDNLFDKM***
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDIVTPLIARQRYAAVVNGTGTASVYAFGECMKDLSPNDCNLCFAQCKTQVLKCLPFQLATRGGRVFYDGCYLRYDDYDFFNESLSSQDRTVCGSKDFGGNNTVFGANAIELVRNLSVQAVKNDGFFVGSVTFSKGNVSVHGLAQCWEFVNGSACENCLENAVSRIASCTQKEEGRVLNAGCYLRYSTQRFYNNSGPDPVPGNGGDNKLAVILATSAVALLLVFSLVAFFVRRKLLQKRRERKQLGALQVAVNKSKLNFSYETLEKATNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQSLLDNLFDKMLSP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	363	2.2.26 [Sep-21-2011]
Q9CAL2	646	Cysteine-rich receptor-li	yes	no	0.977	0.549	0.636	1e-132
Q9FNE1	651	Cysteine-rich receptor-li	no	no	0.878	0.490	0.470	4e-82
Q9LMB9	615	Cysteine-rich receptor-li	no	no	0.933	0.551	0.411	1e-67
Q9CAL3	649	Cysteine-rich receptor-li	no	no	0.955	0.534	0.4	5e-64
Q9M0G5	625	Putative cysteine-rich re	no	no	0.953	0.553	0.324	7e-50
Q9T0J1	665	Cysteine-rich receptor-li	no	no	0.922	0.503	0.308	4e-37
Q9M0X5	675	Cysteine-rich receptor-li	no	no	0.895	0.481	0.312	5e-37
O65476	662	Putative cysteine-rich re	no	no	0.928	0.509	0.312	1e-34
O65483	636	Cysteine-rich receptor-li	no	no	0.900	0.514	0.305	5e-34
Q8S9L6	679	Cysteine-rich receptor-li	no	no	0.909	0.486	0.288	1e-33

>sp|Q9CAL2|CRK3_ARATH Cysteine-rich receptor-like protein kinase 3 OS=Arabidopsis thaliana GN=CRK3 PE=2 SV=1

 Score =  470 bits (1210), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 229/360 (63%), Positives = 277/360 (76%), Gaps = 5/360 (1%)

Query: 1   MDIVTPLIARQRYAAVVNGTGTASVYAFGECMKDLSPNDCNLCFAQCKTQVLKCLPFQLA 60
           MD V+PL+  + Y  VVNGTG  +VYA+GEC+KDL   DC+LCFAQ K +V +CLPFQ  
Sbjct: 52  MDAVSPLVEAKGYGQVVNGTGNLTVYAYGECIKDLDKKDCDLCFAQIKAKVPRCLPFQKG 111

Query: 61  TRGGRVFYDGCYLRYDDYDFFNESLSSQDRTVCGSKDFGG-NNTVFGANAIELVRNLSVQ 119
           TRGG+VF DGCY+RYDDY+F+NE+LS QDRTVC  K+  G N TVF  NA ELV+N+SV+
Sbjct: 112 TRGGQVFSDGCYIRYDDYNFYNETLSLQDRTVCAPKEITGVNRTVFRDNAAELVKNMSVE 171

Query: 120 AVKNDGFFVGSVTFSKGNVSVHGLAQCWEFVNGSACENCLENAVSRIASCTQKEEGRVLN 179
           AV+N GF+ G V   + NV+VHGLAQCWE +N S C  CL  A  RI SC   EEGRVL+
Sbjct: 172 AVRNGGFYAGFV--DRHNVTVHGLAQCWETLNRSGCVECLSKASVRIGSCLVNEEGRVLS 229

Query: 180 AGCYLRYSTQRFYNNSGPDPVPGNGGDNKLAVILA--TSAVALLLVFSLVAFFVRRKLLQ 237
           AGCY+R+STQ+FYNNSG     GNGG N L VILA  +S VA +L+ S   F ++++  +
Sbjct: 230 AGCYMRFSTQKFYNNSGNSTSDGNGGHNHLGVILAVTSSVVAFVLLVSAAGFLLKKRHAK 289

Query: 238 KRRERKQLGALQVAVNKSKLNFSYETLEKATNYFHESNKLGQGGSGSVYKGTLPGGEAVA 297
           K+RE+KQLG+L +  NKS L FSYE LE+AT+YF + NKLGQGGSGSVYKG L  G+ VA
Sbjct: 290 KQREKKQLGSLFMLANKSNLCFSYENLERATDYFSDKNKLGQGGSGSVYKGVLTNGKTVA 349

Query: 298 VKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQSLLDNLF 357
           VKRLF+NT QWVDHFFNEVNLIS ++HKNLVKLLGCSITGPESLLVYE++ NQSL D LF
Sbjct: 350 VKRLFFNTKQWVDHFFNEVNLISQVDHKNLVKLLGCSITGPESLLVYEYIANQSLHDYLF 409

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: -

>sp|Q9FNE1|CRK42_ARATH Cysteine-rich receptor-like protein kinase 42 OS=Arabidopsis thaliana GN=CRK42 PE=2 SV=1

 Score =  305 bits (781), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 161/342 (47%), Positives = 213/342 (62%), Gaps = 23/342 (6%)

Query: 22  TASVYAFGECMKDLSPNDCNLCFAQCKTQVLKCLPFQLATRGGRVFYDGCYLRYDDYDFF 81
           T S+YA  +C  DLSP+DC LC+A  +T++ +CLP    +   R+F DGC+LRY+ Y+F+
Sbjct: 81  TTSIYALIQCHDDLSPSDCQLCYAIARTRIPRCLP----SSSARIFLDGCFLRYETYEFY 136

Query: 82  NESLS-SQDRTVCGSKDFGGNNTVFGAN-AIELVRNLSVQAVKNDGFFVGSVTFSKGNVS 139
           +ES+S + D   C       N+TV       ++    +  AV+  GF V       G   
Sbjct: 137 DESVSDASDSFSCS------NDTVLDPRFGFQVSETAARVAVRKGGFGVA------GENG 184

Query: 140 VHGLAQCWEFVNGSACENCLENAVSRIASCTQKEEGRVLNAGCYLRYSTQRFYNNSGPDP 199
           VH LAQCWE +    C  CLE AV  +  C  + EGR +N GCYLRYS  +FYN  G   
Sbjct: 185 VHALAQCWESLGKEDCRVCLEKAVKEVKRCVSRREGRAMNTGCYLRYSDHKFYNGDGHHK 244

Query: 200 --VPGNGGDNKLAVILATSAVALLLVFSLVAFFVRRKLLQKRRERKQLGALQVAVNKSKL 257
             V  N G   +A++L TSA  +L++  L  + +  K+ + ++E++ LG +    N SK 
Sbjct: 245 FHVLFNKG-VIVAIVLTTSAFVMLIL--LATYVIMTKVSKTKQEKRNLGLVSRKFNNSKT 301

Query: 258 NFSYETLEKATNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVN 317
            F YETLEKAT+YF     LGQGG+G+V+ G LP G+ VAVKRL +NT  WV+ FFNEVN
Sbjct: 302 KFKYETLEKATDYFSHKKMLGQGGNGTVFLGILPNGKNVAVKRLVFNTRDWVEEFFNEVN 361

Query: 318 LISGINHKNLVKLLGCSITGPESLLVYEFVPNQSLLDNLFDK 359
           LISGI HKNLVKLLGCSI GPESLLVYE+VPN+SL   LFD+
Sbjct: 362 LISGIQHKNLVKLLGCSIEGPESLLVYEYVPNKSLDQFLFDE 403

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9LMB9|CRK1_ARATH Cysteine-rich receptor-like protein kinase 1 OS=Arabidopsis thaliana GN=CRK1 PE=2 SV=2

 Score =  256 bits (655), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 153/372 (41%), Positives = 217/372 (58%), Gaps = 33/372 (8%)

Query: 1   MDIVTPLIARQRYAAVVNGTGTAS-VYAFGECMKDLSPNDCNLCFAQCKTQVLKCLPFQL 59
           M  V   I   +   V + T  +  +Y F +C +DLS +DC  CF + + ++ +    + 
Sbjct: 55  MSSVNDFITNDKLWVVSSITDVSPPIYVFLQCREDLSVSDCRHCFNESRLELER----KC 110

Query: 60  ATRGGRVFYDGCYLRYDDYDFFNESLSSQ-DRTVCGSKDFGGNNTVFGANAIELVRNLSV 118
           +  GGR+  D C+LR+DD DF  E +    D+  C  ++ G     F     E + N+++
Sbjct: 111 SGSGGRIHSDRCFLRFDDRDFSEEFVDPTFDKANC--EETGTGFGEFWRFLDEALVNVTL 168

Query: 119 QAVKNDGFFVGSVTFSKGNVSVHGLAQCWEFVNGSACENCLENAVSRIASCTQKEEGRVL 178
           +AVKN GF   SV  ++   +V+ LAQCW+ ++ + C  CL NA S + +C    E R  
Sbjct: 169 KAVKNGGFGAASVIKTE---AVYALAQCWQTLDENTCRECLVNARSSLRAC-DGHEARAF 224

Query: 179 NAGCYLRYSTQRFYNNSG---PDPVPGN--------GGDNKLAVILATSAVALLLVFSLV 227
             GCYL+YST +F++++    PD    N           ++    LA +A++L ++ SL 
Sbjct: 225 FTGCYLKYSTHKFFDDAAEHKPDADQRNFIRSSFFPHLSDRDVTRLAIAAISLSILTSLG 284

Query: 228 AFFVRRKLLQKRRERKQLGALQVAVNKSKLNFSYETLEKATNYFHESNKLGQGGSGSVYK 287
           AF   R++ +KR+          A   S +NF YE LEKAT  FH+S KLGQGG+GSVYK
Sbjct: 285 AFISYRRVSRKRK----------AQVPSCVNFKYEMLEKATESFHDSMKLGQGGAGSVYK 334

Query: 288 GTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFV 347
           G LP G  VAVK+LF+NT +W D FFNEVNLISG+ HKNLV+LLGCSI GP+SLLVYE+V
Sbjct: 335 GILPDGRIVAVKKLFFNTREWADQFFNEVNLISGVQHKNLVRLLGCSIEGPKSLLVYEYV 394

Query: 348 PNQSLLDNLFDK 359
            N+SL   LF K
Sbjct: 395 HNRSLDQILFMK 406

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9CAL3|CRK2_ARATH Cysteine-rich receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=CRK2 PE=2 SV=1

 Score =  245 bits (625), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 146/365 (40%), Positives = 208/365 (56%), Gaps = 18/365 (4%)

Query: 1   MDIVTPLIARQRYAAVVNGTGTASVYAFGECMKDLSPNDCNLCFAQCKTQVLKCLPFQLA 60
           M+ ++  +    +   + GTG  + Y   +C  DL  NDC LC+A+ +T + +C P    
Sbjct: 59  MEKISTQVQTSGFGVALTGTGPDANYGLAQCYGDLPLNDCVLCYAEARTMLPQCYP---- 114

Query: 61  TRGGRVFYDGCYLRYDDYDFFNESLSSQDRTVCGSKDFGGNNTVFGANAIELVRNLSVQA 120
             GGR+F DGC++R ++Y F+NE    +D  VCG+      N  FG    + +RN   +A
Sbjct: 115 QNGGRIFLDGCFMRAENYSFYNEYKGPEDSIVCGNTT--RKNKTFGDAVRQGLRNAVTEA 172

Query: 121 VKNDGFFVGSVTFSKG-NVSVHGLAQCWEFVNGSACENCLENA-VSRIASCTQKEEGRVL 178
               G+   S    +  + S   LA CW  ++  +C+ CLENA  S +  C    EGR L
Sbjct: 173 SGTGGYARASAKAGESESESAFVLANCWRTLSPDSCKQCLENASASVVKGCLPWSEGRAL 232

Query: 179 NAGCYLRYSTQRFYNNSGPDPVPGNG---GDNKLAVILATSAVALLLVFSLVAFFV--RR 233
           + GC+LRYS Q F N      +P NG   G   + V+   S+V + ++   V+ ++  RR
Sbjct: 233 HTGCFLRYSDQDFLNK-----IPRNGRSRGSVVVIVVSVLSSVVVFMIGVAVSVYICKRR 287

Query: 234 KLLQKRRERKQLGALQVAVNKSKLNFSYETLEKATNYFHESNKLGQGGSGSVYKGTLPGG 293
            + +KRR  K +  +   +  S LNF Y TLEKAT  F  +NKLGQGG G+VYKG LP G
Sbjct: 288 TIKRKRRGSKDVEKMAKTLKDSSLNFKYSTLEKATGSFDNANKLGQGGFGTVYKGVLPDG 347

Query: 294 EAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQSLL 353
             +AVKRLF+N       F+NEVN+IS + HKNLV+LLGCS +GPESLLVYE++ N+SL 
Sbjct: 348 RDIAVKRLFFNNRHRATDFYNEVNMISTVEHKNLVRLLGCSCSGPESLLVYEYLQNKSLD 407

Query: 354 DNLFD 358
             +FD
Sbjct: 408 RFIFD 412

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9M0G5|CRK43_ARATH Putative cysteine-rich receptor-like protein kinase 43 OS=Arabidopsis thaliana GN=CRK43 PE=3 SV=1

 Score =  198 bits (503), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 122/376 (32%), Positives = 187/376 (49%), Gaps = 30/376 (7%)

Query: 1   MDIVTPLIARQRYAAVVNGTGTASVYAFGECMKDLSPNDCNLCFAQCKTQVLKCLPFQLA 60
           +D +   +   ++    +G     +Y   +C+ DLS ++C+LC+++    + +C P    
Sbjct: 55  LDAIRGDMRHVKFGTHEHGDPPERMYVLSQCVSDLSSDECSLCWSRATDLLSQCFP---- 110

Query: 61  TRGGRVFYDGCYLRYDDYDFFNESLSSQDRTVCGSKDFGGNNTVFGANAIELVRNLSVQA 120
             GG    DGC++R D+Y F+ E +S QD  +C S      +  F     E+ +++   A
Sbjct: 111 ATGGWFHLDGCFVRADNYSFYQEPVSHQDTKICASDK--EKSAEFKGLVKEVTKSIVEAA 168

Query: 121 VKNDGFFVGSVTFSKGNVSVHGLAQCWEFVNGSACENCLENAVSRIASCTQKEEGRVLNA 180
             + GF V  +     +++V+GL  CW  +N   C+ CL +    + SC   +EG  LNA
Sbjct: 169 PYSRGFSVAKMGIR--DLTVYGLGVCWRTLNDELCKLCLADGALSVTSCLPSKEGFALNA 226

Query: 181 GCYLRYSTQRFYNNSGPDPVPGNGGDNKLAVILATSAVALLLV----FSLVAFFVRR--- 233
           GCYLRYS   FYN  G   +  +     L  I   S V +L +    +    F++R    
Sbjct: 227 GCYLRYSNYTFYNERGL--LAMSFTKENLTYIFVISMVGVLAIAAGFWCGKCFYMRTSPK 284

Query: 234 -----------KLLQKRRERKQLGALQVAVNKSKLNFSYETLEKATNYFHESNKLGQGGS 282
                       L    R  K+  +  +      ++F Y TL+KATN F+ES KLG GG 
Sbjct: 285 KKIKGTKTKKFHLFGHLRIEKE--SESICTESHLMSFEYSTLKKATNNFNESCKLGVGGY 342

Query: 283 GSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLL 342
           G V+KGTL  G  +A+KRL  +  +  D   NE+++IS   HKNLV+LLGC  T   S +
Sbjct: 343 GEVFKGTLSDGREIAIKRLHVSGKKPRDEIHNEIDVISRCQHKNLVRLLGCCFTNMNSFI 402

Query: 343 VYEFVPNQSLLDNLFD 358
           VYEF+ N SL   LF+
Sbjct: 403 VYEFLANTSLDHILFN 418

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9T0J1|CRK26_ARATH Cysteine-rich receptor-like protein kinase 26 OS=Arabidopsis thaliana GN=CRK26 PE=2 SV=1

 Score =  155 bits (393), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 114/370 (30%), Positives = 177/370 (47%), Gaps = 35/370 (9%)

Query: 19  GTGTASVYAFGECMKDLSPNDCNLCFAQCKTQVLKCLPFQLATRGGRVFYDGCYLRYDDY 78
           G     V +  +C  D+    C  C A    +++   P Q   +   ++YD C  RY + 
Sbjct: 71  GDSDEKVNSISQCRGDVKLEVCINCIAMAGKRLVTLCPVQ---KEAIIWYDKCTFRYSNR 127

Query: 79  DFFNESLSSQDRTVCGSKDFGGNNTVFGANAIELVRNL----SVQAVKNDGFFVGSVTFS 134
             FN    S   ++ G+++F G+   +  +   L+  L    SV       F VG  T  
Sbjct: 128 TIFNRLEISPHTSITGTRNFTGDRDSWEKSLRGLLEGLKNRASVIGRSKKNFVVGE-TSG 186

Query: 135 KGNVSVHGLAQCWEFVNGSACENCLENAVSRIASCTQKEEGR-VLNAGCYLRYSTQRFYN 193
               ++ GL QC   ++   C  CL   +++I SC   + G  V++  C L Y+  RFY+
Sbjct: 187 PSFQTLFGLVQCTPDISEEDCSYCLSQGIAKIPSCCDMKMGSYVMSPSCMLAYAPWRFYD 246

Query: 194 ---NSGPDPVPG--------------NGGDNK---LAVILATSAVALLLVFSLVAFF--- 230
                 P  VP                G  N+    A+I A+++VA++++F ++      
Sbjct: 247 PVDTDDPSSVPATPSRPPKNETRSVTQGDKNRGVPKALIFASASVAIVVLFIVLLVVFLK 306

Query: 231 VRRKLLQKRRERKQLGALQVAVNKSKLNFSYETLEKATNYFHESNKLGQGGSGSVYKGTL 290
           +RRK   +  E K        ++   + F +  L+ AT++F   NKLG+GG G+VYKG L
Sbjct: 307 LRRKENIRNSENKHENE---NISTDSMKFDFSVLQDATSHFSLENKLGEGGFGAVYKGVL 363

Query: 291 PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQ 350
             G+ +AVKRL  N  Q    F NE  L++ + H+NLVKLLG SI G E LLVYEF+P+ 
Sbjct: 364 SDGQKIAVKRLSKNAQQGETEFKNEFLLVAKLQHRNLVKLLGYSIEGTERLLVYEFLPHT 423

Query: 351 SLLDNLFDKM 360
           SL   +FD +
Sbjct: 424 SLDKFIFDPI 433

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9M0X5|CRK25_ARATH Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana GN=CRK25 PE=2 SV=1

 Score =  155 bits (392), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 113/362 (31%), Positives = 171/362 (47%), Gaps = 37/362 (10%)

Query: 25  VYAFGECMKDLSPNDCNLCFAQCKTQVLKCLPFQLATRGGRVFYDGCYLRYDDYDFFNES 84
           VY    C  D+S   C  C A    + L+  P +   +   ++YD C +RY      N+S
Sbjct: 82  VYGVFLCRGDVSAEICRDCVAFAANETLQRCPRE---KVAVIWYDECMVRYS-----NQS 133

Query: 85  LSSQDRTVCG----SKDFGGNNTV--FGANAIELVRNLSVQAVKNDGFFVGSVTFSKGNV 138
           +  Q R   G    +K     N V  F  +   L+ +++V+A  +   F           
Sbjct: 134 IVGQMRIRPGVFLTNKQNITENQVSRFNESLPALLIDVAVKAALSSRKFATEKANFTVFQ 193

Query: 139 SVHGLAQCWEFVNGSACENCLENAVSRIASCTQKEEG-RVLNAGCYLRYSTQRFYNNS-- 195
           +++ L QC   +    CE+CL   ++ +  C  +  G RV+   C  RY    FYN +  
Sbjct: 194 TIYSLVQCTPDLTNQDCESCLRQVINYLPRCCDRSVGGRVIAPSCSFRYELYPFYNETIA 253

Query: 196 --------------GPDPVPGNGGDNKLAVILATS-----AVALLLVFSLVAFFVRRKLL 236
                          P  +P   G  K   ++ T+     +V +LL+ ++     RR+  
Sbjct: 254 AAPMAPPPSSTVTAPPLNIPSEKGKGKNLTVIVTAIAVPVSVCVLLLGAMCWLLARRRNN 313

Query: 237 QKRRERKQLGALQVAVNKSKLNFSYETLEKATNYFHESNKLGQGGSGSVYKGTLPGGEAV 296
           +   E + L    +   ++ L F +  +E ATN F ESNKLG GG G VYKG L  GE V
Sbjct: 314 KLSAETEDLDEDGITSTET-LQFQFSAIEAATNKFSESNKLGHGGFGEVYKGQLITGETV 372

Query: 297 AVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQSLLDNL 356
           A+KRL   +TQ  + F NEV++++ + H+NL KLLG  + G E +LVYEFVPN+SL   L
Sbjct: 373 AIKRLSQGSTQGAEEFKNEVDVVAKLQHRNLAKLLGYCLDGEEKILVYEFVPNKSLDYFL 432

Query: 357 FD 358
           FD
Sbjct: 433 FD 434

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|O65476|CRK16_ARATH Putative cysteine-rich receptor-like protein kinase 16 OS=Arabidopsis thaliana GN=CRK16 PE=3 SV=2

 Score =  147 bits (372), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 112/358 (31%), Positives = 166/358 (46%), Gaps = 21/358 (5%)

Query: 19  GTGTASVYAFGECMKDLSPNDCNLCFAQCKTQVLKCLPFQLATRGGRVFYD--GCYLRYD 76
           G G   +YA G C++   P  C+ C      +V+K    Q        F +   C +RY 
Sbjct: 68  GQGPDRLYASGTCIQGSEPELCSACIDSAFIRVIKKCHNQTEALDWSSFNEEYPCMIRYS 127

Query: 77  DYDFFNESLSSQDRTVCGSKDFGGNNTVFGANAIELVRNLSVQAVKN-DGFFVGSVTFSK 135
           +  FF     +       + DF  N T F      L+  +   A+ + +  F G+ T   
Sbjct: 128 NRSFFGLLEMTPFFKNYNATDFQVNLTEFYQKWEALMLGVIADAISSPNPKFYGAGTGKI 187

Query: 136 GNVSVHGLAQCWEFVNGSACENCLENAVSRIA-SCTQKEEGRVLNAGCYLRYSTQRFYN- 193
           G  +V+    C + ++   C  CL   V     SC+ K  G   +  CY+R+   +FY  
Sbjct: 188 GIQTVYAFVLCSKDISPWNCSRCLRGNVDNYKLSCSGKPRGHSFSPSCYMRWDLYQFYGF 247

Query: 194 ---NSGP---------DPVPGNGGDNKLAVILATSAVALLLVFSLVAFFVRRKLLQKRRE 241
               + P           +  +GG      IL    + + L F +    V    L +RR+
Sbjct: 248 IEYRASPTLPREKGRISELSDDGGKISTRNILG---ITVALAFFITVLLVLGYALSRRRK 304

Query: 242 RKQLGALQVAVNKS-KLNFSYETLEKATNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKR 300
             Q  A +  +  S  L F ++ +E ATN F +SNKLG GG G V+KGT P G  VAVKR
Sbjct: 305 AYQEFATENDITTSGSLQFDFKAIEAATNNFQKSNKLGHGGFGEVFKGTFPNGTEVAVKR 364

Query: 301 LFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQSLLDNLFD 358
           L   + Q  + F NEV L++ + H+NLV+LLG S+ G E +LVYE++PN+SL   LFD
Sbjct: 365 LSKISGQGEEEFKNEVLLVAKLQHRNLVRLLGFSVEGEEKILVYEYMPNKSLDYFLFD 422

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|O65483|CRK24_ARATH Cysteine-rich receptor-like protein kinase 24 OS=Arabidopsis thaliana GN=CRK24 PE=3 SV=2

 Score =  145 bits (366), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 104/340 (30%), Positives = 166/340 (48%), Gaps = 13/340 (3%)

Query: 26  YAFGECMKDLSPNDCNLCFAQCKTQVLKCLPFQLATRGGRVFYDGCYLRYDDYDFFNESL 85
           Y  G C+     + C+ C      ++L+    Q      R+    C +RY +  F++   
Sbjct: 70  YGLGMCVPGTDAHSCSDCIILANARLLQNCTNQTEAIVWRIDRTVCLVRYSNRSFYSSLG 129

Query: 86  SSQDRTVCGSKDFGGNNTVFGANAIELVRNLSVQAVKNDGFFVGSVTFSKGNVS-VHGLA 144
               R+   ++DF  N T        L+  +  QA  +  ++   +   + ++S ++G  
Sbjct: 130 MEILRSDNYTRDFQANLTDLEITWEALMIRMIDQA--SYLYYAAGIRKLETSISRIYGFV 187

Query: 145 QCWEFVNGSACENCLENAVSRIASCTQ-KEEGRVLNAGCYLRYSTQRF---YNNSGPDPV 200
           QC   ++   C  CL+  V    SC + ++ G +L   C++R+    F   ++N  P   
Sbjct: 188 QCSRDLSLQNCTKCLQQNVVEYRSCCRGRQGGIILRPSCFIRWELYPFLGLFDNIRPRQ- 246

Query: 201 PGNGGDNKLAVILATSAVALLLVFSLVAFFVRRKLLQKRRERKQLGALQVAVNKSKLNFS 260
             +G       I+A   V +LL+   V  + RRK  + +  +    A  +  + S L F 
Sbjct: 247 -KDGKSISTGAIVAIIVVPILLLALGVGLWKRRKAYKTKTTKI---ADDITTSGS-LQFE 301

Query: 261 YETLEKATNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLIS 320
           ++ +E AT  FH  NKLG GG G VYKGT P G  VAVKRL   + Q  + F NEV L++
Sbjct: 302 FKAIEAATCNFHNVNKLGHGGFGEVYKGTFPNGTEVAVKRLSKTSGQGEEEFKNEVFLVA 361

Query: 321 GINHKNLVKLLGCSITGPESLLVYEFVPNQSLLDNLFDKM 360
            + H+NLVKLLG ++ G E +LVYEF+PN+SL   LFD +
Sbjct: 362 KLQHRNLVKLLGYAVKGDEKILVYEFLPNKSLDHFLFDPV 401

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q8S9L6|CRK29_ARATH Cysteine-rich receptor-like protein kinase 29 OS=Arabidopsis thaliana GN=CRK29 PE=2 SV=1

 Score =  144 bits (363), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 106/367 (28%), Positives = 165/367 (44%), Gaps = 37/367 (10%)

Query: 25  VYAFGECMKDLSPNDCNLCFAQCKTQVLKCLPFQLATRGGRVFYDGCYLRYDDYDFFNES 84
            YA G C +++  +DC  C       + K  P    T+   V+Y  C  RY +   +   
Sbjct: 82  AYAIGLCRREVKRDDCVSCIQTAARNLTKQCPL---TKQAVVWYTHCMFRYSNRTIYGRK 138

Query: 85  LSSQDRTVCGSKDFGGNNTVF---GANAIELVRNLSVQAVKNDGFFVGSVTFSKGNVSVH 141
            ++  +     ++   N   F       ++ ++ ++     N  +  G+ + S G    +
Sbjct: 139 ETNPTKAFIAGEEISANRDDFERLQRGLLDRLKGIAAAGGPNRKYAQGNGSASAGYRRFY 198

Query: 142 GLAQCWEFVNGSACENCLENAVSRIASCTQKEEG-RVLNAGCYLRYSTQRFYN---NSGP 197
           G  QC   ++   C +CL      I SC   E G R  +  C  R+ T RFY    +  P
Sbjct: 199 GTVQCTPDLSEQDCNDCLVFGFENIPSCCDAEIGLRWFSPSCNFRFETWRFYEFDADLEP 258

Query: 198 DPVP------------------GNGGDNKL-AVILATSAVALLLVFSLVAFFVRR----- 233
           DP                    G GG   + A+++    VALL +   +    R+     
Sbjct: 259 DPPAIQPADSPQSAARTERTGKGKGGSKVIIAIVIPILLVALLAICLCLVLKWRKNKSGY 318

Query: 234 --KLLQKRRERKQLGALQVAVNKSKLNFSYETLEKATNYFHESNKLGQGGSGSVYKGTLP 291
             K+L K      +   + + N   L   +ETL+ AT+ F   N+LG+GG GSVYKG  P
Sbjct: 319 KNKVLGKSPLSGSIAEDEFS-NTESLLVHFETLKTATDNFSSENELGRGGFGSVYKGVFP 377

Query: 292 GGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQS 351
            G+ +AVKRL  N+ Q  + F NE+ L++ + H+NLV+L+G  I G E LLVYEF+ N S
Sbjct: 378 QGQEIAVKRLSGNSGQGDNEFKNEILLLAKLQHRNLVRLIGFCIQGEERLLVYEFIKNAS 437

Query: 352 LLDNLFD 358
           L   +FD
Sbjct: 438 LDQFIFD 444

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	363
255573959	649	kinase, putative [Ricinus communis] gi|2	0.975	0.545	0.727	1e-151
225425611	649	PREDICTED: cysteine-rich receptor-like p	0.994	0.556	0.712	1e-148
147767572	690	hypothetical protein VITISV_005912 [Viti	0.994	0.523	0.715	1e-147
449434953	651	PREDICTED: cysteine-rich receptor-like p	0.975	0.543	0.690	1e-137
356502033	648	PREDICTED: cysteine-rich receptor-like p	0.975	0.546	0.652	1e-134
15223170	646	cysteine-rich receptor-like protein kina	0.977	0.549	0.636	1e-130
356567656	656	PREDICTED: cysteine-rich receptor-like p	0.972	0.538	0.645	1e-130
297841809	649	kinase family protein [Arabidopsis lyrat	0.977	0.546	0.628	1e-126
255567375	605	kinase, putative [Ricinus communis] gi|2	0.947	0.568	0.482	2e-83
449446869	601	PREDICTED: cysteine-rich receptor-like p	0.955	0.577	0.458	3e-82

>gi|255573959|ref|XP_002527897.1| kinase, putative [Ricinus communis] gi|223532672|gb|EEF34454.1| kinase, putative [Ricinus communis]

 Score =  539 bits (1388), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 262/360 (72%), Positives = 306/360 (85%), Gaps = 6/360 (1%)

Query: 1   MDIVTPLIARQRYAAVVNGTGTASVYAFGECMKDLSPNDCNLCFAQCKTQVLKCLPFQLA 60
           +D VTPL+ARQ+Y AV+NGTG  +VY +GECMKDL   DCNLCFAQCKTQ+L+CLPFQLA
Sbjct: 56  LDAVTPLVARQQYGAVINGTGNTTVYTYGECMKDLDQTDCNLCFAQCKTQILRCLPFQLA 115

Query: 61  TRGGRVFYDGCYLRYDDYDFFNESLSSQDRTVCGSKDF-GGNNTVFGANAIELVRNLSVQ 119
           TRGGR+FYDGCYLRYDDY FFNESL SQDRTVC S+DF GGN T++  NA+EL+RNLSV 
Sbjct: 116 TRGGRLFYDGCYLRYDDYYFFNESLDSQDRTVCASEDFNGGNKTLYSDNAMELMRNLSVL 175

Query: 120 AVKNDGFFVGSVTFSKGNVSVHGLAQCWEFVNGSACENCLENAVSRIASCTQKEEGRVLN 179
             KNDGFFVGSV  +KGN+SV+GLAQCWE VN SACE CL +AVS+I +CT KEEGRVLN
Sbjct: 176 TPKNDGFFVGSV--NKGNISVYGLAQCWELVNTSACETCLADAVSKITNCTPKEEGRVLN 233

Query: 180 AGCYLRYSTQRFYNNSGPDPVPGNGGDNKLAVILATSAVALLLVFSL--VAFFVRRKLLQ 237
           +GCYLRYSTQ+FYNNSGP     NGG + LAVILA ++ ++ +V  +    FF+++++ +
Sbjct: 234 SGCYLRYSTQKFYNNSGPANA-DNGGSSHLAVILAAASSSVAVVLLVATAVFFMKKRVAE 292

Query: 238 KRRERKQLGALQVAVNKSKLNFSYETLEKATNYFHESNKLGQGGSGSVYKGTLPGGEAVA 297
           KRR+RK+LGAL +AVN SKLNF+YE+LEKATNYFH SNKLGQGGSGSVYKG LP G+AVA
Sbjct: 293 KRRQRKELGALLIAVNNSKLNFTYESLEKATNYFHLSNKLGQGGSGSVYKGILPDGKAVA 352

Query: 298 VKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQSLLDNLF 357
           +KRL +NT QWVDHFFNEVNLIS I HKNLVKLLGCSITGPESLLVYE+VPNQSL D LF
Sbjct: 353 IKRLLFNTRQWVDHFFNEVNLISNIQHKNLVKLLGCSITGPESLLVYEYVPNQSLHDYLF 412

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225425611|ref|XP_002266015.1| PREDICTED: cysteine-rich receptor-like protein kinase 3 [Vitis vinifera] gi|297739090|emb|CBI28579.3| unnamed protein product [Vitis vinifera]

 Score =  530 bits (1365), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 260/365 (71%), Positives = 305/365 (83%), Gaps = 4/365 (1%)

Query: 1   MDIVTPLIARQRYAAVVNGTGTASVYAFGECMKDLSPNDCNLCFAQCKTQVLKCLPFQLA 60
           MD VTPLI+ QRYA V +GTG+ +V+ FGECM+DLS NDCNLCFA CKTQ+L+C+PFQ +
Sbjct: 58  MDQVTPLISTQRYADVTSGTGSTAVFLFGECMEDLSQNDCNLCFALCKTQLLRCVPFQKS 117

Query: 61  TRGGRVFYDGCYLRYDDYDFFNESLSSQDRTVCGSKDFGGNNTVFGANAIELVRNLSVQA 120
           TRGGR FYDGCY+RYDDY FF+E+LS++D+TVCG+KDF G+ TVF ANAIELVRNLSV+A
Sbjct: 118 TRGGRSFYDGCYIRYDDYKFFDEALSAEDKTVCGTKDFSGDQTVFRANAIELVRNLSVEA 177

Query: 121 VKNDGFFVGSVTFSKGNVSVHGLAQCWEFVNGSACENCLENAVSRIASCTQKEEGRVLNA 180
             NDGFFVGSV  ++ N+SV+GLAQCWEFV GSAC  CL NA SRI  C  KEEGRVLNA
Sbjct: 178 PGNDGFFVGSV--NRSNISVYGLAQCWEFVKGSACAECLANATSRIGLCPPKEEGRVLNA 235

Query: 181 GCYLRYSTQRFYNNSGPDPVPGNGGDNKLAVIL--ATSAVALLLVFSLVAFFVRRKLLQK 238
           GCYLRYSTQ+FY+NS  D V  N G ++LA+IL   +S+ ALLL+ ++  FFVR+K  ++
Sbjct: 236 GCYLRYSTQKFYDNSTSDFVEENEGSSRLAIILGVTSSSFALLLIIAMTVFFVRKKRAKR 295

Query: 239 RRERKQLGALQVAVNKSKLNFSYETLEKATNYFHESNKLGQGGSGSVYKGTLPGGEAVAV 298
           RRE+KQLG L   VNKSKLNFSYETLEKATNYFH SNKLGQGGSGSVYKG +P G+ VA+
Sbjct: 296 RREKKQLGDLLATVNKSKLNFSYETLEKATNYFHHSNKLGQGGSGSVYKGIMPDGKVVAI 355

Query: 299 KRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQSLLDNLFD 358
           KRLF+N+ QWVDHFFNEVNLISGI+HKNLVKLLGCSITGPESLLVYE+VPNQSL D L  
Sbjct: 356 KRLFFNSRQWVDHFFNEVNLISGIDHKNLVKLLGCSITGPESLLVYEYVPNQSLHDYLVK 415

Query: 359 KMLSP 363
           +   P
Sbjct: 416 RNAPP 420

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147767572|emb|CAN64525.1| hypothetical protein VITISV_005912 [Vitis vinifera]

 Score =  528 bits (1361), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 261/365 (71%), Positives = 305/365 (83%), Gaps = 4/365 (1%)

Query: 1   MDIVTPLIARQRYAAVVNGTGTASVYAFGECMKDLSPNDCNLCFAQCKTQVLKCLPFQLA 60
           MD VTPLI+ QRYA V +GTG+ +V+ FGECM+DLS NDCNLCFA CKTQ+L+C+PFQ +
Sbjct: 15  MDQVTPLISTQRYADVTSGTGSTAVFLFGECMEDLSQNDCNLCFALCKTQLLRCVPFQKS 74

Query: 61  TRGGRVFYDGCYLRYDDYDFFNESLSSQDRTVCGSKDFGGNNTVFGANAIELVRNLSVQA 120
           TRGGR FYDGCY+RYDDY FF+E+LS++D+TVCG+KDF G+ TVF ANAIELVRNLSV+A
Sbjct: 75  TRGGRSFYDGCYIRYDDYKFFDEALSAEDKTVCGTKDFSGDQTVFRANAIELVRNLSVEA 134

Query: 121 VKNDGFFVGSVTFSKGNVSVHGLAQCWEFVNGSACENCLENAVSRIASCTQKEEGRVLNA 180
             NDGFFVGSV  ++ N+SV+GLAQCWEFV GSAC  CL NA SRI  C  KEEGRVLNA
Sbjct: 135 PGNDGFFVGSV--NRSNISVYGLAQCWEFVKGSACAECLANATSRIGLCPPKEEGRVLNA 192

Query: 181 GCYLRYSTQRFYNNSGPDPVPGNGGDNKLAVIL--ATSAVALLLVFSLVAFFVRRKLLQK 238
           GCYLRYSTQ+FY+NS  D V  N G ++LA+IL   +S+ ALLL+ ++  FFVR+K  ++
Sbjct: 193 GCYLRYSTQKFYDNSTSDFVEENEGSSRLAIILGVTSSSFALLLIIAMTVFFVRKKRAKR 252

Query: 239 RRERKQLGALQVAVNKSKLNFSYETLEKATNYFHESNKLGQGGSGSVYKGTLPGGEAVAV 298
           RRERKQLG L   VNKSKLNFSYETLEKATNYFH SNKLGQGGSGSVYKG +P G+ VA+
Sbjct: 253 RRERKQLGDLLATVNKSKLNFSYETLEKATNYFHHSNKLGQGGSGSVYKGIMPDGKVVAI 312

Query: 299 KRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQSLLDNLFD 358
           KRLF+N+ QWVDHFFNEVNLISGI+HKNLVKLLGCSITGPESLLVYE+VPNQSL D L  
Sbjct: 313 KRLFFNSRQWVDHFFNEVNLISGIDHKNLVKLLGCSITGPESLLVYEYVPNQSLHDYLVK 372

Query: 359 KMLSP 363
           +   P
Sbjct: 373 RNAPP 377

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449434953|ref|XP_004135260.1| PREDICTED: cysteine-rich receptor-like protein kinase 3-like [Cucumis sativus] gi|449516641|ref|XP_004165355.1| PREDICTED: cysteine-rich receptor-like protein kinase 3-like [Cucumis sativus]

 Score =  493 bits (1269), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 248/359 (69%), Positives = 284/359 (79%), Gaps = 5/359 (1%)

Query: 1   MDIVTPLIARQRYAAVVNGTGTASVYAFGECMKDLSPNDCNLCFAQCKTQVLKCLPFQLA 60
           MD VTPLIA QR+AAV+NGTG  +VYAFGECM DLS  DC+LCFAQ KTQVL+CLPFQLA
Sbjct: 60  MDAVTPLIASQRFAAVINGTGNTTVYAFGECMNDLSQADCDLCFAQMKTQVLRCLPFQLA 119

Query: 61  TRGGRVFYDGCYLRYDDYDFFNESLSSQDRTVCGSKDFGGNNTVFGANAIELVRNLSVQA 120
           TRGGR+FYDGC++RYD Y+FFNESLS+ DRTVCG  D+ GN +VF  +A++L RNLSV A
Sbjct: 120 TRGGRLFYDGCFVRYDYYNFFNESLSAVDRTVCGKLDYSGNRSVFSDSAMKLARNLSVVA 179

Query: 121 VKNDGFFVGSVTFSKGNVSVHGLAQCWEFVNGSACENCLENAVSRIASCTQKEEGRVLNA 180
            KNDGF VGSV F   NVSV+GL QCW+FV GS+C  CL +A   I SC  K EGRVLNA
Sbjct: 180 PKNDGFAVGSVDFR--NVSVYGLGQCWKFVRGSSCSKCLVDAAKEIGSCPPKSEGRVLNA 237

Query: 181 GCYLRYSTQRFYNNSGPDPVPGNGGDNKLAVILATSAVALLLVF--SLVAFFVRRKLLQK 238
           GCY RYST++FY N+      GN    +LA+ILA+ + A+      S V F  RR++L+K
Sbjct: 238 GCYFRYSTEKFYFNTTATATGGNNS-RRLAIILASVSAAVAAALIISTVLFCARRRVLRK 296

Query: 239 RRERKQLGALQVAVNKSKLNFSYETLEKATNYFHESNKLGQGGSGSVYKGTLPGGEAVAV 298
           R E++QLG L   VNKSKLNFSYETLEKATNYF +SNKLGQGGSGSVYKGTL  G  VA+
Sbjct: 297 RNEKRQLGPLVAIVNKSKLNFSYETLEKATNYFDQSNKLGQGGSGSVYKGTLSDGRVVAI 356

Query: 299 KRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQSLLDNLF 357
           KRLF+NT QWVDHFFNEVNLISGI HKNLV LLGCSITGPESLLVYE+VPNQSL D LF
Sbjct: 357 KRLFFNTRQWVDHFFNEVNLISGIRHKNLVGLLGCSITGPESLLVYEYVPNQSLHDYLF 415

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356502033|ref|XP_003519826.1| PREDICTED: cysteine-rich receptor-like protein kinase 3-like [Glycine max]

 Score =  486 bits (1250), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 235/360 (65%), Positives = 286/360 (79%), Gaps = 6/360 (1%)

Query: 1   MDIVTPLIARQRYAAVVNGT--GTASVYAFGECMKDLSPNDCNLCFAQCKTQVLKCLPFQ 58
           ++ +T L+ RQ+YA VV GT    A+VYAFGEC KDL+  DC++CFAQCKT+VL+C PFQ
Sbjct: 52  LEALTALVTRQKYAFVVKGTTQNNATVYAFGECRKDLTKPDCDVCFAQCKTRVLRCSPFQ 111

Query: 59  LATRGGRVFYDGCYLRYDDYDFFNESLSSQDRTVCGSKDFGGNNTVFGANAIELVRNLSV 118
               GG  F+DGC+LRYD Y+FFNESLS QD TVCG++DF GN +V+ AN +ELVRNLS+
Sbjct: 112 RGIDGGMFFFDGCFLRYDGYNFFNESLSPQDFTVCGTEDFSGNWSVYKANTVELVRNLSI 171

Query: 119 QAVKNDGFFVGSVTFSKGNVSVHGLAQCWEFVNGSACENCLENAVSRIASCTQKEEGRVL 178
           +A KN+GFFVG V  S+ NV+V+GLAQCW+F+NGSAC+NCL  AV+RI SC  K EG+ L
Sbjct: 172 EAPKNEGFFVGYV--SQRNVTVYGLAQCWKFMNGSACQNCLVEAVTRIDSCASKAEGKAL 229

Query: 179 NAGCYLRYSTQRFYNNSGPDPVPGNGGDNKLAVILA--TSAVALLLVFSLVAFFVRRKLL 236
           NAGCYLRYST  FYN+S  +    N G   LA+I+A  ++++ALLL+ + V FFVR  LL
Sbjct: 230 NAGCYLRYSTHNFYNSSNNNVPHENQGHKNLAIIVAVASASLALLLIVATVVFFVRTNLL 289

Query: 237 QKRRERKQLGALQVAVNKSKLNFSYETLEKATNYFHESNKLGQGGSGSVYKGTLPGGEAV 296
           ++RRER+Q GAL   VNKSKLN  YE LEKAT+YF  SNKLG+GGSGSVYKG LP G  +
Sbjct: 290 KRRRERRQFGALLNTVNKSKLNMPYEILEKATDYFSHSNKLGEGGSGSVYKGVLPDGNTM 349

Query: 297 AVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQSLLDNL 356
           A+KRL +NT+QW DHFFNEVNLISGI+HKNLVKLLGCSITGPESLLVYEFVPN SL D+L
Sbjct: 350 AIKRLSFNTSQWADHFFNEVNLISGIHHKNLVKLLGCSITGPESLLVYEFVPNHSLYDHL 409

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15223170|ref|NP_177210.1| cysteine-rich receptor-like protein kinase 3 [Arabidopsis thaliana] gi|75333658|sp|Q9CAL2.1|CRK3_ARATH RecName: Full=Cysteine-rich receptor-like protein kinase 3; Short=Cysteine-rich RLK3; Flags: Precursor gi|12325043|gb|AAG52470.1|AC010796_9 putative protein kinase; 41292-38663 [Arabidopsis thaliana] gi|332196954|gb|AEE35075.1| cysteine-rich receptor-like protein kinase 3 [Arabidopsis thaliana]

 Score =  470 bits (1210), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 229/360 (63%), Positives = 277/360 (76%), Gaps = 5/360 (1%)

Query: 1   MDIVTPLIARQRYAAVVNGTGTASVYAFGECMKDLSPNDCNLCFAQCKTQVLKCLPFQLA 60
           MD V+PL+  + Y  VVNGTG  +VYA+GEC+KDL   DC+LCFAQ K +V +CLPFQ  
Sbjct: 52  MDAVSPLVEAKGYGQVVNGTGNLTVYAYGECIKDLDKKDCDLCFAQIKAKVPRCLPFQKG 111

Query: 61  TRGGRVFYDGCYLRYDDYDFFNESLSSQDRTVCGSKDFGG-NNTVFGANAIELVRNLSVQ 119
           TRGG+VF DGCY+RYDDY+F+NE+LS QDRTVC  K+  G N TVF  NA ELV+N+SV+
Sbjct: 112 TRGGQVFSDGCYIRYDDYNFYNETLSLQDRTVCAPKEITGVNRTVFRDNAAELVKNMSVE 171

Query: 120 AVKNDGFFVGSVTFSKGNVSVHGLAQCWEFVNGSACENCLENAVSRIASCTQKEEGRVLN 179
           AV+N GF+ G V   + NV+VHGLAQCWE +N S C  CL  A  RI SC   EEGRVL+
Sbjct: 172 AVRNGGFYAGFV--DRHNVTVHGLAQCWETLNRSGCVECLSKASVRIGSCLVNEEGRVLS 229

Query: 180 AGCYLRYSTQRFYNNSGPDPVPGNGGDNKLAVILA--TSAVALLLVFSLVAFFVRRKLLQ 237
           AGCY+R+STQ+FYNNSG     GNGG N L VILA  +S VA +L+ S   F ++++  +
Sbjct: 230 AGCYMRFSTQKFYNNSGNSTSDGNGGHNHLGVILAVTSSVVAFVLLVSAAGFLLKKRHAK 289

Query: 238 KRRERKQLGALQVAVNKSKLNFSYETLEKATNYFHESNKLGQGGSGSVYKGTLPGGEAVA 297
           K+RE+KQLG+L +  NKS L FSYE LE+AT+YF + NKLGQGGSGSVYKG L  G+ VA
Sbjct: 290 KQREKKQLGSLFMLANKSNLCFSYENLERATDYFSDKNKLGQGGSGSVYKGVLTNGKTVA 349

Query: 298 VKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQSLLDNLF 357
           VKRLF+NT QWVDHFFNEVNLIS ++HKNLVKLLGCSITGPESLLVYE++ NQSL D LF
Sbjct: 350 VKRLFFNTKQWVDHFFNEVNLISQVDHKNLVKLLGCSITGPESLLVYEYIANQSLHDYLF 409

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356567656|ref|XP_003552033.1| PREDICTED: cysteine-rich receptor-like protein kinase 3-like [Glycine max]

 Score =  470 bits (1209), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 239/370 (64%), Positives = 279/370 (75%), Gaps = 17/370 (4%)

Query: 1   MDIVTPLIARQRYAAVVNGTGTASVYAFGECMKDLSPNDCNLCFAQCKTQVLKCLPFQLA 60
           MD +TPL     + AV NG+  A+VYAFGECM+DLS NDCNLC AQCKTQ+L CLPFQ  
Sbjct: 54  MDALTPLTTSHGHGAVSNGSQNATVYAFGECMRDLSRNDCNLCLAQCKTQLLACLPFQRG 113

Query: 61  TRGGRVFYDGCYLRYDDYDFFNESLSSQDRTVCGSKDF------------GGNNTVFGAN 108
           TRGGR+F+DGCYLRYDDY+FF E+ S QD TVCG+                 ++ V+ AN
Sbjct: 114 TRGGRLFFDGCYLRYDDYNFFGETRSDQDTTVCGNNSNNNNSNSVANSATNSSSGVYKAN 173

Query: 109 AIELVRNLSVQAVKNDGFFVGSVTFSKGNVSVHGLAQCWEFVNGSACENCLENAVSRIAS 168
           A+ LV NLS  A K+DGFFVGSV   + NV V+GLAQCWE+VNGSACE CL +AV+RI S
Sbjct: 174 AMALVLNLSELAPKSDGFFVGSV--ERKNVRVYGLAQCWEYVNGSACERCLADAVTRIGS 231

Query: 169 CTQKEEGRVLNAGCYLRYSTQRFYNNSGPDPVPGNGGDNKLAVILATSAVALLL--VFSL 226
           C   +E R LNAGCYLRYS Q+FYNNSG  P  G  G  +LA ILA S+ AL L  V + 
Sbjct: 232 CA-TQEARALNAGCYLRYSAQKFYNNSGVVPTAGKHGKRRLAKILAASSAALALLLVIAT 290

Query: 227 VAFFVRRKLLQKRRERKQLGALQVAVNKSKLNFSYETLEKATNYFHESNKLGQGGSGSVY 286
           V FF+R+ ++ +RRER+Q GAL   VNKSKLN  YE LEKATNYF+E+NKLGQGGSGSVY
Sbjct: 291 VVFFIRKNVVTRRRERRQFGALLDTVNKSKLNMPYEVLEKATNYFNEANKLGQGGSGSVY 350

Query: 287 KGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEF 346
           KG +P G  VA+KRL +NTTQW DHFFNEVNLISGI+HKNLVKLLGCSITGPESLLVYE+
Sbjct: 351 KGVMPDGITVAIKRLSFNTTQWADHFFNEVNLISGIHHKNLVKLLGCSITGPESLLVYEY 410

Query: 347 VPNQSLLDNL 356
           VPNQSL D+ 
Sbjct: 411 VPNQSLHDHF 420

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297841809|ref|XP_002888786.1| kinase family protein [Arabidopsis lyrata subsp. lyrata] gi|297334627|gb|EFH65045.1| kinase family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 227/361 (62%), Positives = 273/361 (75%), Gaps = 6/361 (1%)

Query: 1   MDIVTPLIARQRYAAVVN-GTGTASVYAFGECMKDLSPNDCNLCFAQCKTQVLKCLPFQL 59
           MD V+PL+  + Y  VVN   G  +VYA+GEC+KDL+  DC+LCFAQ K +V  CLPFQ 
Sbjct: 54  MDAVSPLVEAKGYGQVVNNANGNLTVYAYGECIKDLNKKDCDLCFAQIKAKVPICLPFQR 113

Query: 60  ATRGGRVFYDGCYLRYDDYDFFNESLSSQDRTVCGSKDFGG-NNTVFGANAIELVRNLSV 118
            TRGG+VF DGCY+RYDDY+FFNE+L  QDRTVC  K+  G N TVF  NA ELV+N+SV
Sbjct: 114 GTRGGQVFSDGCYIRYDDYNFFNETLGLQDRTVCAPKEITGVNRTVFRDNAAELVKNMSV 173

Query: 119 QAVKNDGFFVGSVTFSKGNVSVHGLAQCWEFVNGSACENCLENAVSRIASCTQKEEGRVL 178
           +AV+N GF+ G V   + NV+VHGLAQCWE +N S C  CL  A   I SC   EEGRVL
Sbjct: 174 EAVRNGGFYAGFV--DRHNVTVHGLAQCWETLNRSGCVECLSKASVSIGSCLVNEEGRVL 231

Query: 179 NAGCYLRYSTQRFYNNSGPDPVPGNGGDNKLAVILA--TSAVALLLVFSLVAFFVRRKLL 236
           +AGCY+R+STQ+FYNNSG     GNGG N L VILA  +S VA +L+ S   F ++++  
Sbjct: 232 SAGCYMRFSTQKFYNNSGNSTSDGNGGHNHLGVILAVTSSVVAFVLLVSAAGFLLKKRHA 291

Query: 237 QKRRERKQLGALQVAVNKSKLNFSYETLEKATNYFHESNKLGQGGSGSVYKGTLPGGEAV 296
           +K+RE+KQLG+L +  NKS L FSYE LE+AT+YF + NKLGQGGSGSVYKG L  G+ V
Sbjct: 292 KKQREKKQLGSLFMLANKSNLCFSYENLERATDYFSDKNKLGQGGSGSVYKGVLTNGKTV 351

Query: 297 AVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQSLLDNL 356
           AVKRLF+NT QWVDHFFNEVNLIS +NHKNLVKLLGCSITGPESLLVYE++ NQSL D L
Sbjct: 352 AVKRLFFNTKQWVDHFFNEVNLISQVNHKNLVKLLGCSITGPESLLVYEYIANQSLHDYL 411

Query: 357 F 357
           F
Sbjct: 412 F 412

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255567375|ref|XP_002524667.1| kinase, putative [Ricinus communis] gi|223536028|gb|EEF37686.1| kinase, putative [Ricinus communis]

 Score =  315 bits (807), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 178/369 (48%), Positives = 235/369 (63%), Gaps = 25/369 (6%)

Query: 1   MDIVTPLIARQRYAAVVNGTGTASVYAFGECMKDLSPNDCNLCFAQCKTQVLKCLPFQLA 60
           M+ ++ LI    +A   +   +  +Y   +C +DLS  DC LC+A  +T++ +CLP    
Sbjct: 1   METLSQLITNSHFA-TYHLNSSLPMYVLAQCHQDLSQTDCLLCYAVSRTKIPRCLP---- 55

Query: 61  TRGGRVFYDGCYLRYDDYDFFNESLS-SQDRTVCGSKDFGGNN-----TVFGANAIELVR 114
           +   R+F DGC+LRYD+Y+FF ES+S S D   C  ++  G+N       F  +    + 
Sbjct: 56  SVSARIFLDGCFLRYDNYNFFEESVSVSFDEVKCSQENVSGSNGENDKLRFVKSVEHAIG 115

Query: 115 NLSVQAVKNDGFFVGSVTFSKGNVSVHGLAQCWEFVNGSACENCLENAVSRIASCTQKEE 174
           N+S +AV+N GF V  +        V+ LAQCWE V    C  CL  A   +  C  K+E
Sbjct: 116 NVSSKAVENGGFGVVGIE------GVYALAQCWESVGKDGCRECLRKAGKEVKGCGAKKE 169

Query: 175 GRVLNAGCYLRYSTQRFYNNSGP----DPVPGNGGDNKLAVILATSAVALLLVFSLVAFF 230
           GR LNAGCYLRYST+RFYN  G       + G G    +AV+LA +AV +L +F++ A +
Sbjct: 170 GRGLNAGCYLRYSTERFYNVGGELEAGHTISGLG--VAIAVVLAAAAVLMLSIFAVYAVY 227

Query: 231 VRRKLLQKRRERKQLGALQVAVNKSKLNFSYETLEKATNYFHESNKLGQGGSGSVYKGTL 290
           VRR  ++ + ER  L  + +  +K+ LNF YETLEKAT+YF+ S K+GQGG+GSVY GTL
Sbjct: 228 VRR--MKNKAERINLEKISINFSKTSLNFKYETLEKATDYFNASRKIGQGGAGSVYAGTL 285

Query: 291 PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQ 350
           P GE VAVKRL +NT QWVD FFNEVNLISGI HKNLVKLLGCSI GPESLLVYE+VPN+
Sbjct: 286 PNGETVAVKRLTFNTRQWVDEFFNEVNLISGIQHKNLVKLLGCSIEGPESLLVYEYVPNK 345

Query: 351 SLLDNLFDK 359
           SL   +F K
Sbjct: 346 SLDQFIFGK 354

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449446869|ref|XP_004141193.1| PREDICTED: cysteine-rich receptor-like protein kinase 42-like [Cucumis sativus] gi|449515394|ref|XP_004164734.1| PREDICTED: cysteine-rich receptor-like protein kinase 42-like [Cucumis sativus]

 Score =  311 bits (797), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 167/364 (45%), Positives = 223/364 (61%), Gaps = 17/364 (4%)

Query: 1   MDIVTPLIARQRYAA-VVNGTGTASVYAFGECMKDLSPNDCNLCFAQCKTQVLKCLPFQL 59
           M+ ++ L+  + +    VN T    ++A  +C  DLS  DC LC+A  +T + +CLP   
Sbjct: 1   MEAISELLTTRSWTTHFVNST--PPMFALSQCFNDLSHTDCLLCYAASRTSLPRCLP--- 55

Query: 60  ATRGGRVFYDGCYLRYDDYDFFNESLSSQDRTVCGSKDFG----GNNTVFGANAIELVRN 115
                R+F DGC+LRYD+Y F+ ES  S   +V  + + G        VFG N   +V  
Sbjct: 56  -AISARIFLDGCFLRYDNYSFYKESTDSVRDSVNCTSELGEIDQSERLVFGENVRVVVET 114

Query: 116 LSVQAVKNDGFFVGSVTFSKGNVSVHGLAQCWEFVNGSACENCLENAVSRIASCTQKEEG 175
           ++ +A++  GF +G V+       + GLAQCW  V    C  CLE A   I SC   +EG
Sbjct: 115 VTTKAMEKGGFGMGEVS------GMFGLAQCWGSVEPEGCRACLEKAKRSIGSCLPSKEG 168

Query: 176 RVLNAGCYLRYSTQRFYNNSGPDPVPGNGGDNKLAVILATSAVALLLVFSLVAFFVRRKL 235
           R +NAGCYLRYST +FYN+   D         +  V +A ++ A L++F    F    ++
Sbjct: 169 RAMNAGCYLRYSTVKFYNDKDEDRDHDGFSGRRAVVTIALASAASLIIFFSAVFACYTRI 228

Query: 236 LQKRRERKQLGALQVAVNKSKLNFSYETLEKATNYFHESNKLGQGGSGSVYKGTLPGGEA 295
            + ++E+K+   + V++  S LNF YETLEKATNYF+ SNK+GQGG+GSVYKGTLP G+ 
Sbjct: 229 SKFKKEKKRQSLIPVSLKDSDLNFKYETLEKATNYFNLSNKIGQGGAGSVYKGTLPNGQI 288

Query: 296 VAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQSLLDN 355
           VAVKRL ++T QWVD FFNEVNLI GI HKNLV LLGCSI GPESLLVYEFV N SL   
Sbjct: 289 VAVKRLVFHTRQWVDEFFNEVNLIRGIQHKNLVALLGCSIEGPESLLVYEFVSNGSLDHF 348

Query: 356 LFDK 359
           +FDK
Sbjct: 349 IFDK 352

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	363
TAIR|locus:2026785	646	CRK3 "cysteine-rich RLK (RECEP	0.523	0.294	0.616	8.1e-108
TAIR|locus:2026821	649	CRK2 "cysteine-rich RLK (RECEP	0.286	0.160	0.625	3.5e-61
TAIR|locus:2139845	625	AT4G28670 [Arabidopsis thalian	0.506	0.294	0.312	8.6e-49
TAIR|locus:2141762	665	CRK26 "cysteine-rich RLK (RECE	0.294	0.160	0.485	3.9e-36
TAIR|locus:2123126	666	CRK31 "cysteine-rich RLK (RECE	0.292	0.159	0.532	1.9e-34
TAIR|locus:2115728	675	CRK25 "cysteine-rich RLK (RECE	0.280	0.151	0.549	4.3e-34
TAIR|locus:2141201	679	CRK29 "cysteine-rich RLK (RECE	0.292	0.156	0.490	1.1e-33
TAIR|locus:2123056	656	CRK32 "cysteine-rich RLK (RECE	0.278	0.153	0.534	1.1e-32
TAIR|locus:2123111	669	CRK34 "cysteine-rich RLK (RECE	0.280	0.152	0.529	4.7e-32
TAIR|locus:2121676	669	CRK10 "cysteine-rich RLK (RECE	0.280	0.152	0.539	4.3e-31

TAIR|locus:2026785 CRK3 "cysteine-rich RLK (RECEPTOR-like protein kinase) 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 646 (232.5 bits), Expect = 8.1e-108, Sum P(2) = 8.1e-108
 Identities = 119/193 (61%), Positives = 146/193 (75%)

Query:     1 MDIVTPLIARQRYAAVVNGTGTASVYAFGECMKDLSPNDCNLCFAQCKTQVLKCLPFQLA 60
             MD V+PL+  + Y  VVNGTG  +VYA+GEC+KDL   DC+LCFAQ K +V +CLPFQ  
Sbjct:    52 MDAVSPLVEAKGYGQVVNGTGNLTVYAYGECIKDLDKKDCDLCFAQIKAKVPRCLPFQKG 111

Query:    61 TRGGRVFYDGCYLRYDDYDFFNESLSSQDRTVCGSKDFGG-NNTVFGANAIELVRNLSVQ 119
             TRGG+VF DGCY+RYDDY+F+NE+LS QDRTVC  K+  G N TVF  NA ELV+N+SV+
Sbjct:   112 TRGGQVFSDGCYIRYDDYNFYNETLSLQDRTVCAPKEITGVNRTVFRDNAAELVKNMSVE 171

Query:   120 AVKNDGFFVGSVTFSKGNVSVHGLAQCWEFVNGSACENCLENAVSRIASCTQKEEGRVLN 179
             AV+N GF+ G V   + NV+VHGLAQCWE +N S C  CL  A  RI SC   EEGRVL+
Sbjct:   172 AVRNGGFYAGFV--DRHNVTVHGLAQCWETLNRSGCVECLSKASVRIGSCLVNEEGRVLS 229

Query:   180 AGCYLRYSTQRFY 192
             AGCY+R+STQ+FY
Sbjct:   230 AGCYMRFSTQKFY 242

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0031347 "regulation of defense response" evidence=RCA

TAIR|locus:2026821 CRK2 "cysteine-rich RLK (RECEPTOR-like protein kinase) 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 338 (124.0 bits), Expect = 3.5e-61, Sum P(2) = 3.5e-61
 Identities = 65/104 (62%), Positives = 78/104 (75%)

Query:   255 SKLNFSYETLEKATNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFN 314
             S LNF Y TLEKAT  F  +NKLGQGG G+VYKG LP G  +AVKRLF+N       F+N
Sbjct:   309 SSLNFKYSTLEKATGSFDNANKLGQGGFGTVYKGVLPDGRDIAVKRLFFNNRHRATDFYN 368

Query:   315 EVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQSLLDNLFD 358
             EVN+IS + HKNLV+LLGCS +GPESLLVYE++ N+SL   +FD
Sbjct:   369 EVNMISTVEHKNLVRLLGCSCSGPESLLVYEYLQNKSLDRFIFD 412

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0010193 "response to ozone" evidence=IEP

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0006457 "protein folding" evidence=RCA

GO:0006857 "oligopeptide transport" evidence=RCA

GO:0009408 "response to heat" evidence=RCA

GO:0009644 "response to high light intensity" evidence=RCA

GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA

GO:0042542 "response to hydrogen peroxide" evidence=RCA

TAIR|locus:2139845 AT4G28670 [Arabidopsis thaliana (taxid:3702)]

 Score = 288 (106.4 bits), Expect = 8.6e-49, Sum P(2) = 8.6e-49
 Identities = 60/192 (31%), Positives = 99/192 (51%)

Query:     1 MDIVTPLIARQRYAAVVNGTGTASVYAFGECMKDLSPNDCNLCFAQCKTQVLKCLPFQLA 60
             +D +   +   ++    +G     +Y   +C+ DLS ++C+LC+++    + +C P   A
Sbjct:    55 LDAIRGDMRHVKFGTHEHGDPPERMYVLSQCVSDLSSDECSLCWSRATDLLSQCFP---A 111

Query:    61 TRGGRVFYDGCYLRYDDYDFFNESLSSQDRTVCGSKDFGGNNTVFGANAIELVRNLSVQA 120
             T GG    DGC++R D+Y F+ E +S QD  +C S      +  F     E+ +++   A
Sbjct:   112 T-GGWFHLDGCFVRADNYSFYQEPVSHQDTKICASDK--EKSAEFKGLVKEVTKSIVEAA 168

Query:   121 VKNDGFFVGSVTFSKGNVSVHGLAQCWEFVNGSACENCLENAVSRIASCTQKEEGRVLNA 180
               + GF V  +     +++V+GL  CW  +N   C+ CL +    + SC   +EG  LNA
Sbjct:   169 PYSRGFSVAKMGIR--DLTVYGLGVCWRTLNDELCKLCLADGALSVTSCLPSKEGFALNA 226

Query:   181 GCYLRYSTQRFY 192
             GCYLRYS   FY
Sbjct:   227 GCYLRYSNYTFY 238

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2141762 CRK26 "cysteine-rich RLK (RECEPTOR-like protein kinase) 26" [Arabidopsis thaliana (taxid:3702)]

 Score = 257 (95.5 bits), Expect = 3.9e-36, Sum P(2) = 3.9e-36
 Identities = 52/107 (48%), Positives = 70/107 (65%)

Query:   252 VNKSKLNFSYETLEKATNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDH 311
             ++   + F +  L+ AT++F   NKLG+GG G+VYKG L  G+ +AVKRL  N  Q    
Sbjct:   325 ISTDSMKFDFSVLQDATSHFSLENKLGEGGFGAVYKGVLSDGQKIAVKRLSKNAQQGETE 384

Query:   312 FFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQSLLDNLFD 358
             F NE  L++ + H+NLVKLLG SI G E LLVYEF+P+ SL   +FD
Sbjct:   385 FKNEFLLVAKLQHRNLVKLLGYSIEGTERLLVYEFLPHTSLDKFIFD 431

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0006826 "iron ion transport" evidence=RCA

GO:0010106 "cellular response to iron ion starvation" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:2123126 CRK31 "cysteine-rich RLK (RECEPTOR-like protein kinase) 31" [Arabidopsis thaliana (taxid:3702)]

 Score = 256 (95.2 bits), Expect = 1.9e-34, Sum P(2) = 1.9e-34
 Identities = 57/107 (53%), Positives = 70/107 (65%)

Query:   257 LNFSYETLEKATNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEV 316
             L F + T+E AT+ F  +NKLGQGG G VYKG LP    +AVKRL  N+ Q    F NEV
Sbjct:   325 LQFDFTTIEVATDNFSRNNKLGQGGFGEVYKGMLPNETEIAVKRLSSNSGQGTQEFKNEV 384

Query:   317 NLISGINHKNLVKLLGCSITGPESLLVYEFVPNQSLLDNLFD-KMLS 362
              +++ + HKNLV+LLG  I   E +LVYEFV N+SL   LFD KM S
Sbjct:   385 VIVAKLQHKNLVRLLGFCIERDEQILVYEFVSNKSLDYFLFDPKMKS 431

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2115728 CRK25 "cysteine-rich RLK (RECEPTOR-like protein kinase) 25" [Arabidopsis thaliana (taxid:3702)]

 Score = 278 (102.9 bits), Expect = 4.3e-34, Sum P(2) = 4.3e-34
 Identities = 56/102 (54%), Positives = 70/102 (68%)

Query:   257 LNFSYETLEKATNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEV 316
             L F +  +E ATN F ESNKLG GG G VYKG L  GE VA+KRL   +TQ  + F NEV
Sbjct:   333 LQFQFSAIEAATNKFSESNKLGHGGFGEVYKGQLITGETVAIKRLSQGSTQGAEEFKNEV 392

Query:   317 NLISGINHKNLVKLLGCSITGPESLLVYEFVPNQSLLDNLFD 358
             ++++ + H+NL KLLG  + G E +LVYEFVPN+SL   LFD
Sbjct:   393 DVVAKLQHRNLAKLLGYCLDGEEKILVYEFVPNKSLDYFLFD 434

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0000041 "transition metal ion transport" evidence=RCA

GO:0006826 "iron ion transport" evidence=RCA

GO:0010106 "cellular response to iron ion starvation" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

TAIR|locus:2141201 CRK29 "cysteine-rich RLK (RECEPTOR-like protein kinase) 29" [Arabidopsis thaliana (taxid:3702)]

 Score = 252 (93.8 bits), Expect = 1.1e-33, Sum P(2) = 1.1e-33
 Identities = 52/106 (49%), Positives = 70/106 (66%)

Query:   253 NKSKLNFSYETLEKATNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHF 312
             N   L   +ETL+ AT+ F   N+LG+GG GSVYKG  P G+ +AVKRL  N+ Q  + F
Sbjct:   339 NTESLLVHFETLKTATDNFSSENELGRGGFGSVYKGVFPQGQEIAVKRLSGNSGQGDNEF 398

Query:   313 FNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQSLLDNLFD 358
              NE+ L++ + H+NLV+L+G  I G E LLVYEF+ N SL   +FD
Sbjct:   399 KNEILLLAKLQHRNLVRLIGFCIQGEERLLVYEFIKNASLDQFIFD 444

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005773 "vacuole" evidence=IDA

GO:0009737 "response to abscisic acid stimulus" evidence=IEP

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2123056 CRK32 "cysteine-rich RLK (RECEPTOR-like protein kinase) 32" [Arabidopsis thaliana (taxid:3702)]

 Score = 253 (94.1 bits), Expect = 1.1e-32, Sum P(2) = 1.1e-32
 Identities = 54/101 (53%), Positives = 67/101 (66%)

Query:   257 LNFSYETLEKATNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEV 316
             L F + TLE AT+ F  +NKLG+GG G VYKG LP    VAVKRL  N+ Q    F NEV
Sbjct:   307 LQFDFMTLEAATDKFSRNNKLGKGGFGEVYKGMLPNETEVAVKRLSSNSGQGTQEFKNEV 366

Query:   317 NLISGINHKNLVKLLGCSITGPESLLVYEFVPNQSLLDNLF 357
              +++ + HKNLV+LLG  +   E +LVYEFVPN+SL   LF
Sbjct:   367 VIVAKLQHKNLVRLLGFCLERDEQILVYEFVPNKSLNYFLF 407

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2123111 CRK34 "cysteine-rich RLK (RECEPTOR-like protein kinase) 34" [Arabidopsis thaliana (taxid:3702)]

 Score = 262 (97.3 bits), Expect = 4.7e-32, Sum P(2) = 4.7e-32
 Identities = 54/102 (52%), Positives = 70/102 (68%)

Query:   257 LNFSYETLEKATNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEV 316
             L FS++T+E AT+ F +SN +G+GG G VY+G L  G  VAVKRL   + Q  + F NE 
Sbjct:   331 LQFSFKTIEAATDKFSDSNMIGRGGFGEVYRGKLSSGPEVAVKRLSKTSGQGAEEFKNEA 390

Query:   317 NLISGINHKNLVKLLGCSITGPESLLVYEFVPNQSLLDNLFD 358
              L+S + HKNLV+LLG  + G E +LVYEFVPN+SL   LFD
Sbjct:   391 VLVSKLQHKNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLFD 432

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2121676 CRK10 "cysteine-rich RLK (RECEPTOR-like protein kinase) 10" [Arabidopsis thaliana (taxid:3702)]

 Score = 257 (95.5 bits), Expect = 4.3e-31, Sum P(2) = 4.3e-31
 Identities = 55/102 (53%), Positives = 70/102 (68%)

Query:   257 LNFSYETLEKATNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEV 316
             L   Y T++ AT+ F ESNK+GQGG G VYKGTL  G  VAVKRL  ++ Q    F NEV
Sbjct:   334 LQLDYRTIQTATDDFVESNKIGQGGFGEVYKGTLSDGTEVAVKRLSKSSGQGEVEFKNEV 393

Query:   317 NLISGINHKNLVKLLGCSITGPESLLVYEFVPNQSLLDNLFD 358
              L++ + H+NLV+LLG  + G E +LVYE+VPN+SL   LFD
Sbjct:   394 VLVAKLQHRNLVRLLGFCLDGEERVLVYEYVPNKSLDYFLFD 435

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0006995 "cellular response to nitrogen starvation" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	AT1G70530	protein kinase family protein; protein kinase family protein; FUNCTIONS IN- kinase activity; INVOLVED IN- protein amino acid phosphorylation; LOCATED IN- plasma membrane; EXPRESSED IN- 23 plant structures; EXPRESSED DURING- 14 growth stages; CONTAINS InterPro DOMAIN/s- Protein kinase, ATP binding site (InterPro-IPR017441), Protein kinase, core (InterPro-IPR000719), Protein of unknown function DUF26 (InterPro-IPR002902), Serine/threonine protein kinase-related (InterPro-IPR017442), Protein kinase-like (InterPro-IPR011009), Serine/threonine protein kinase, active site (InterPro-IPR008271 [...] (646 aa)
		(Arabidopsis thaliana)
Predicted Functional Partners:
	AT1G70520	protein kinase family protein; protein kinase family protein; FUNCTIONS IN- kinase activity; IN [...] (649 aa)				•				•	0.675
	AT4G08520	clathrin adaptor complex small chain family protein; clathrin adaptor complex small chain famil [...] (181 aa)							•		0.597
	AT4G23460	beta-adaptin, putative; beta-adaptin, putative; FUNCTIONS IN- protein transporter activity, pro [...] (893 aa)							•		0.591
	MLO2	MLO2 (MILDEW RESISTANCE LOCUS O 2); calmodulin binding; A member of a large family of seven-tra [...] (573 aa)				•					0.508
	AT3G11130	clathrin heavy chain, putative; clathrin heavy chain, putative; FUNCTIONS IN- protein binding, [...] (1705 aa)							•		0.507
	SCL1	SCL1 (SCARECROW-LIKE 1); transcription factor; Encodes a scarecrow-like protein (SCL1). Member [...] (593 aa)				•					0.475
	AT-HSFA4A	AT-HSFA4A; DNA binding / transcription factor; member of Heat Stress Transcription Factor (Hsf) [...] (401 aa)				•					0.469
	anac053	anac053 (Arabidopsis NAC domain containing protein 53); transcription factor; Arabidopsis NAC d [...] (549 aa)				•					0.466
	PSKR1	PSKR1 (PHYTOSULFOKIN RECEPTOR 1); ATP binding / peptide receptor/ protein serine/threonine kina [...] (1008 aa)				•				•	0.434
	AT1G18390	ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase; [...] (654 aa)				•				•	0.414

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	363
pfam01657	106	pfam01657, Stress-antifung, Salt stress response/a	2e-15
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	1e-14
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	3e-14
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	1e-13
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	8e-13
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	9e-13
pfam01657	106	pfam01657, Stress-antifung, Salt stress response/a	1e-12
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	3e-12
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	5e-11
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	6e-11
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	1e-09
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	3e-09
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	7e-09
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	1e-08
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	2e-08
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	2e-07
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	2e-07
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	4e-07
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	6e-07
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	2e-06
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	2e-06
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	2e-06
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	3e-06
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	3e-06
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	4e-06
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	4e-06
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	9e-06
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	1e-05
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	2e-05
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	2e-05
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	2e-05
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	2e-05
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	3e-05
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	3e-05
cd05110	303	cd05110, PTKc_HER4, Catalytic domain of the Protei	4e-05
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	4e-05
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	5e-05
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	6e-05
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	9e-05
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	9e-05
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	1e-04
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	1e-04
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	1e-04
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	1e-04
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	2e-04
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	2e-04
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	2e-04
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	3e-04
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	3e-04
cd05078	258	cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat	3e-04
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	3e-04
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	3e-04
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	3e-04
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	3e-04
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	4e-04
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	5e-04
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	6e-04
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	6e-04
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	8e-04
PLN00113	968	PLN00113, PLN00113, leucine-rich repeat receptor-l	8e-04
cd05035	273	cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li	9e-04
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	0.001
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	0.001
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	0.001
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	0.001
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	0.001
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	0.002
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	0.002
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	0.002
cd05109	279	cd05109, PTKc_HER2, Catalytic domain of the Protei	0.003
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	0.003
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	0.003
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	0.003
cd05108	316	cd05108, PTKc_EGFR, Catalytic domain of the Protei	0.004
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	0.004

>gnl|CDD|216632 pfam01657, Stress-antifung, Salt stress response/antifungal

 Score = 70.9 bits (174), Expect = 2e-15
 Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 3/72 (4%)

Query: 9   ARQRYAAVVNGTGTASVYAFGECMKDLSPNDCNLCFAQCKTQVLKCLPFQLATRGGRVFY 68
           + + +AA  +G    +VY   +C  DLS +DC  C A   +++ +C P +   +GGR++Y
Sbjct: 38  SGKGFAAGTSGAAPDTVYGLAQCRGDLSASDCRSCLATAVSELRRCCPNK---KGGRIWY 94

Query: 69  DGCYLRYDDYDF 80
           D C+LRY+ Y F
Sbjct: 95  DSCFLRYESYPF 106

This domain is often found in association with the kinase domains pfam00069 or pfam07714. In many proteins it is duplicated. It contains six conserved cysteines which are involved in disulphide bridges. It has a role in salt stress response and has antifungal activity. Length = 106

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 71.5 bits (176), Expect = 1e-14
 Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 2/80 (2%)

Query: 277 LGQGGSGSVYKGTLPG-GEAVAVKRL-FYNTTQWVDHFFNEVNLISGINHKNLVKLLGCS 334
           LG+GG G+VY       G+ VA+K +   +++  ++    E+ ++  +NH N+VKL G  
Sbjct: 1   LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVF 60

Query: 335 ITGPESLLVYEFVPNQSLLD 354
                  LV E+    SL D
Sbjct: 61  EDENHLYLVMEYCEGGSLKD 80

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 71.4 bits (176), Expect = 3e-14
 Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 8/86 (9%)

Query: 276 KLGQGGSGSVYKGTL-----PGGEAVAVKRLFYNTT--QWVDHFFNEVNLISGINHKNLV 328
           KLG+G  G VYKGTL          VAVK L    +  +  + F  E +++  ++H N+V
Sbjct: 6   KLGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREE-FLEEASIMKKLSHPNIV 64

Query: 329 KLLGCSITGPESLLVYEFVPNQSLLD 354
           +LLG    G    +V E++P   LLD
Sbjct: 65  RLLGVCTQGEPLYIVTEYMPGGDLLD 90

Length = 258

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 69.5 bits (171), Expect = 1e-13
 Identities = 31/86 (36%), Positives = 42/86 (48%), Gaps = 7/86 (8%)

Query: 275 NKLGQGGSGSVYKGTLPGGE----AVAVKRL--FYNTTQWVDHFFNEVNLISGINHKNLV 328
            KLG+G  G VYKG L G +     VAVK L    +  +  D F  E  ++  + H N+V
Sbjct: 1   KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKD-FLKEARVMKKLGHPNVV 59

Query: 329 KLLGCSITGPESLLVYEFVPNQSLLD 354
           +LLG         LV E++    LLD
Sbjct: 60  RLLGVCTEEEPLYLVLEYMEGGDLLD 85

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 67.2 bits (165), Expect = 8e-13
 Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 8/86 (9%)

Query: 276 KLGQGGSGSVYKGTL-----PGGEAVAVKRLFYNTT--QWVDHFFNEVNLISGINHKNLV 328
           KLG+G  G VYKG L          VAVK L  + +  Q  + F  E  ++  ++H N+V
Sbjct: 6   KLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEE-FLREARIMRKLDHPNVV 64

Query: 329 KLLGCSITGPESLLVYEFVPNQSLLD 354
           KLLG         +V E++    LL 
Sbjct: 65  KLLGVCTEEEPLYIVMEYMEGGDLLS 90

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 67.2 bits (165), Expect = 9e-13
 Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 8/86 (9%)

Query: 276 KLGQGGSGSVYKGTL-----PGGEAVAVKRL--FYNTTQWVDHFFNEVNLISGINHKNLV 328
           KLG+G  G VYKGTL          VAVK L    +  Q  + F  E  ++  ++H N+V
Sbjct: 6   KLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEE-FLREARIMRKLDHPNIV 64

Query: 329 KLLGCSITGPESLLVYEFVPNQSLLD 354
           KLLG        ++V E++P   LLD
Sbjct: 65  KLLGVCTEEEPLMIVMEYMPGGDLLD 90

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|216632 pfam01657, Stress-antifung, Salt stress response/antifungal

 Score = 63.2 bits (154), Expect = 1e-12
 Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 1/95 (1%)

Query: 98  FGGNNTVFGANAIELVRNLSVQAVKNDGFFVGSVTFSKGNVSVHGLAQCWEFVNGSACEN 157
           +   N+ F +N   L+ +LS  A  + G    + T      +V+GLAQC   ++ S C +
Sbjct: 12  YTTANSTFESNLNALLSSLSSNAASSSGKGFAAGTSGAAPDTVYGLAQCRGDLSASDCRS 71

Query: 158 CLENAVSRIAS-CTQKEEGRVLNAGCYLRYSTQRF 191
           CL  AVS +   C  K+ GR+    C+LRY +  F
Sbjct: 72  CLATAVSELRRCCPNKKGGRIWYDSCFLRYESYPF 106

This domain is often found in association with the kinase domains pfam00069 or pfam07714. In many proteins it is duplicated. It contains six conserved cysteines which are involved in disulphide bridges. It has a role in salt stress response and has antifungal activity. Length = 106

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 65.7 bits (161), Expect = 3e-12
 Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 3/92 (3%)

Query: 271 FHESNKLGQGGSGSVYKGTLPG-GEAVAVKRLFYNTTQWVDH--FFNEVNLISGINHKNL 327
           +    KLG G  G+VYK    G G+ VAVK L   + +         E+ ++  ++H N+
Sbjct: 1   YELLRKLGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNI 60

Query: 328 VKLLGCSITGPESLLVYEFVPNQSLLDNLFDK 359
           V+L+          LV E+     L D L   
Sbjct: 61  VRLIDAFEDKDHLYLVMEYCEGGDLFDYLSRG 92

Length = 260

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 61.9 bits (151), Expect = 5e-11
 Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 3/87 (3%)

Query: 271 FHESNKLGQGGSGSVYKG-TLPGGEAVAVKRLFYNT--TQWVDHFFNEVNLISGINHKNL 327
           +   + +G+G  G VYKG  L  G+ VA+K++       + +     E++L+  + H N+
Sbjct: 2   YQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNI 61

Query: 328 VKLLGCSITGPESLLVYEFVPNQSLLD 354
           VK +G   T     ++ E+  N SL  
Sbjct: 62  VKYIGSIETSDSLYIILEYAENGSLRQ 88

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 61.8 bits (151), Expect = 6e-11
 Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 2/84 (2%)

Query: 275 NKLGQGGSGSVYKGT-LPGGEAVAVKRL-FYNTTQWVDHFFNEVNLISGINHKNLVKLLG 332
            KLG+G  G VY       G+ VA+K +      +  +    E+ ++  + H N+V+L  
Sbjct: 5   EKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLKHPNIVRLYD 64

Query: 333 CSITGPESLLVYEFVPNQSLLDNL 356
                 +  LV E+     L D L
Sbjct: 65  VFEDEDKLYLVMEYCEGGDLFDLL 88

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 58.0 bits (141), Expect = 1e-09
 Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 1/86 (1%)

Query: 270 YFHESNKLGQGGSGSVYKGT-LPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLV 328
            F    K+G+GG G VYK      G+ VA+K +   + +  +   NE+ ++    H N+V
Sbjct: 1   LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIV 60

Query: 329 KLLGCSITGPESLLVYEFVPNQSLLD 354
           K  G  +   E  +V EF    SL D
Sbjct: 61  KYYGSYLKKDELWIVMEFCSGGSLKD 86

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 56.8 bits (138), Expect = 3e-09
 Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 5/85 (5%)

Query: 275 NKLGQGGSGSVYKGTLPG-GEAVAVK--RLFYNTTQWVDHFFNEVNLISGINHKNLVKLL 331
             LG+G  GSVY       GE +AVK   L  ++ + ++    E+ ++S + H N+V+  
Sbjct: 6   ELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYY 65

Query: 332 GCSIT-GPESLLVY-EFVPNQSLLD 354
           G        +L ++ E+V   SL  
Sbjct: 66  GSERDEEKNTLNIFLEYVSGGSLSS 90

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 55.5 bits (134), Expect = 7e-09
 Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 6/93 (6%)

Query: 276 KLGQGGSGSVYKGTL--PGGE--AVAVKRLFY-NTTQWVDHFFNEVNLISGINHKNLVKL 330
           KLG G  G V +G     GG+   VAVK L     +  +D F  E  ++  ++H+NL++L
Sbjct: 2   KLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRL 61

Query: 331 LGCSITGPESLLVYEFVPNQSLLDNLFDKMLSP 363
            G  +T P  ++V E  P  SLLD L    L  
Sbjct: 62  YGVVLTHP-LMMVTELAPLGSLLDRLRKDALGH 93

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 55.2 bits (133), Expect = 1e-08
 Identities = 32/83 (38%), Positives = 44/83 (53%), Gaps = 2/83 (2%)

Query: 275 NKLGQGGSGSVYKGTLPG-GEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGC 333
           +KLG G  G VY+G        VAVK L  +T + V+ F  E  ++  I H NLV+LLG 
Sbjct: 12  HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 70

Query: 334 SITGPESLLVYEFVPNQSLLDNL 356
               P   ++ EF+   +LLD L
Sbjct: 71  CTREPPFYIITEFMTYGNLLDYL 93

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 54.3 bits (131), Expect = 2e-08
 Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 2/80 (2%)

Query: 277 LGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSIT 336
           +G+G  G V  G   G + VAVK L  ++T     F  E ++++ + H NLV+LLG  + 
Sbjct: 14  IGKGEFGDVMLGDYRG-QKVAVKCLKDDSTA-AQAFLAEASVMTTLRHPNLVQLLGVVLQ 71

Query: 337 GPESLLVYEFVPNQSLLDNL 356
           G    +V E++   SL+D L
Sbjct: 72  GNPLYIVTEYMAKGSLVDYL 91

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 51.6 bits (124), Expect = 2e-07
 Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 12/93 (12%)

Query: 274 SNKLGQGGSGSVYKGTL--PG---GEAVAVKRLFYNTTQWVDH---FFNEVNLISGINHK 325
             +LG+G  G V        G   GE VAVK L  N +    H   F  E+ ++  ++H+
Sbjct: 9   IKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSL--NHSGEEQHRSDFEREIEILRTLDHE 66

Query: 326 NLVKLLGCS--ITGPESLLVYEFVPNQSLLDNL 356
           N+VK  G      G    L+ E++P+ SL D L
Sbjct: 67  NIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYL 99

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 51.3 bits (123), Expect = 2e-07
 Identities = 30/82 (36%), Positives = 40/82 (48%), Gaps = 1/82 (1%)

Query: 276 KLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWV-DHFFNEVNLISGINHKNLVKLLGCS 334
           K+G+G  G VYKG L G   VAVK         +   F  E  ++   +H N+VKL+G  
Sbjct: 2   KIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVC 61

Query: 335 ITGPESLLVYEFVPNQSLLDNL 356
           +      +V E VP  SLL  L
Sbjct: 62  VQKQPIYIVMELVPGGSLLTFL 83

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 50.5 bits (121), Expect = 4e-07
 Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 9/84 (10%)

Query: 277 LGQGGSGSVYKGTL--PGGE----AVAVKRLF-YNTTQWVDHFFNEVNLISGINHKNLVK 329
           LG+G  G VYKG L  P       +VA+K L      +    F  E  L+S + H N+V 
Sbjct: 13  LGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVC 72

Query: 330 LLG-CSITGPESLLVYEFVPNQSL 352
           LLG C+   P  +L +E++ +  L
Sbjct: 73  LLGVCTKEQPTCML-FEYLAHGDL 95

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 50.5 bits (119), Expect = 6e-07
 Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 6/90 (6%)

Query: 271 FHESNKLGQGGSGSVYKGTLPGGEAVAVKRL---FYNTTQWVDHFFNEVNLISGINH-KN 326
           +    KLG+G  G VY       + VA+K L     + ++ V+ F  E+ +++ +NH  N
Sbjct: 2   YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPN 59

Query: 327 LVKLLGCSITGPESLLVYEFVPNQSLLDNL 356
           +VKL           LV E+V   SL D L
Sbjct: 60  IVKLYDFFQDEGSLYLVMEYVDGGSLEDLL 89

Length = 384

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 48.6 bits (116), Expect = 2e-06
 Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 7/84 (8%)

Query: 277 LGQGGSGSVYKGT-LPGGE----AVAVKRLFYNTT-QWVDHFFNEVNLISGINHKNLVKL 330
           LG G  G+VYKG  +P GE     VA+K L   T+ +      +E  +++ ++H ++V+L
Sbjct: 15  LGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRL 74

Query: 331 LGCSITGPESLLVYEFVPNQSLLD 354
           LG  ++  +  L+ + +P   LLD
Sbjct: 75  LGICLS-SQVQLITQLMPLGCLLD 97

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 48.5 bits (116), Expect = 2e-06
 Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 6/90 (6%)

Query: 275 NKLGQGGSGSVYKGT--LPGGE--AVAVKRLFYNTTQW-VDHFFNEVNLISGINHKNLVK 329
            +LG G  GSV KG   +  G+   VAVK L           F  E ++++ ++H  +V+
Sbjct: 1   KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVR 60

Query: 330 LLGCSITGPESLLVYEFVPNQSLLDNLFDK 359
           L+G    G   +LV E  P   LL  L  +
Sbjct: 61  LIGVCK-GEPLMLVMELAPLGPLLKYLKKR 89

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 48.5 bits (116), Expect = 2e-06
 Identities = 29/85 (34%), Positives = 40/85 (47%), Gaps = 8/85 (9%)

Query: 275 NKLGQGGSGSVYKG-TLPGGEAVAVKRLFYNTTQW---VDHFFNEVNLISGINHKNLVKL 330
             +G G +  VY    LP  E VA+KR+  +  +    VD    EV  +S  NH N+VK 
Sbjct: 7   EVIGVGATAVVYAAICLPNNEKVAIKRI--DLEKCQTSVDELRKEVQAMSQCNHPNVVKY 64

Query: 331 LGCSITGPESL-LVYEFVPNQSLLD 354
              S    + L LV  ++   SLLD
Sbjct: 65  Y-TSFVVGDELWLVMPYLSGGSLLD 88

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 47.7 bits (114), Expect = 3e-06
 Identities = 31/82 (37%), Positives = 40/82 (48%), Gaps = 3/82 (3%)

Query: 276 KLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLG-CS 334
           KLG G  G V+ GT  G   VAVK L   T    + F  E  ++  + H  LV+L   CS
Sbjct: 13  KLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMS-PEAFLQEAQIMKKLRHDKLVQLYAVCS 71

Query: 335 ITGPESLLVYEFVPNQSLLDNL 356
              P   +V E++   SLLD L
Sbjct: 72  EEEP-IYIVTEYMSKGSLLDFL 92

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 48.0 bits (115), Expect = 3e-06
 Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 2/88 (2%)

Query: 268 TNYFHESNKLGQGGSGSVYKGTLPG-GEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKN 326
              +    K+G+G SG VYK T    G+ VA+K++     Q  +   NE+ ++    H N
Sbjct: 18  RELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRL-RKQNKELIINEILIMKDCKHPN 76

Query: 327 LVKLLGCSITGPESLLVYEFVPNQSLLD 354
           +V      + G E  +V E++   SL D
Sbjct: 77  IVDYYDSYLVGDELWVVMEYMDGGSLTD 104

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 47.4 bits (113), Expect = 4e-06
 Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 9/94 (9%)

Query: 277 LGQGGSGSVYKGTL----PGGEA--VAVKRLFYNTTQWV-DHFFNEVNLISGINHKNLVK 329
           LG+G  G V+ G      P  +   VAVK L    +      F  E  L++   H+N+VK
Sbjct: 13  LGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVK 72

Query: 330 LLGCSITGPESLLVYEFVPNQSLLDNLFDKMLSP 363
             G    G   ++V+E++ +  L  N F +   P
Sbjct: 73  FYGVCTEGDPPIMVFEYMEHGDL--NKFLRSHGP 104

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 47.8 bits (114), Expect = 4e-06
 Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 15/97 (15%)

Query: 271 FHESNKLGQGGSGSVY----KGTLPGGEAVAVKRLFYNTTQWVD---HFFNEVNLISGIN 323
           F    ++GQGG G V+    K T   GE VA+KR+  +    ++   H   E ++++   
Sbjct: 3   FQILTQVGQGGYGQVFLAKKKDT---GEIVALKRMKKSLLFKLNEVRHVLTERDILTTTK 59

Query: 324 HKNLVKLLGCSITGPESL-LVYEFVPN---QSLLDNL 356
            + LVKLL  +    E L L  E+VP    ++LL+NL
Sbjct: 60  SEWLVKLL-YAFQDDEYLYLAMEYVPGGDFRTLLNNL 95

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 46.4 bits (110), Expect = 9e-06
 Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 2/81 (2%)

Query: 276 KLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSI 335
           KLG G  G V+ G   G   VA+K L   +    + F  E NL+  + H  LV+L    +
Sbjct: 13  KLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMS-PEAFLAEANLMKQLQHPRLVRLYAV-V 70

Query: 336 TGPESLLVYEFVPNQSLLDNL 356
           T     ++ E++ N SL+D L
Sbjct: 71  TQEPIYIITEYMENGSLVDFL 91

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 45.8 bits (109), Expect = 1e-05
 Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 3/64 (4%)

Query: 272 HESNKLGQGGSGSVYKG-TLPGGEAVAVK--RLFYNTTQWVDHFFNEVNLISGINHKNLV 328
              NK+G G  G VY    L  GE +AVK  R+  N  + +    +E+ ++  + H NLV
Sbjct: 3   QRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLV 62

Query: 329 KLLG 332
           K  G
Sbjct: 63  KYYG 66

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 45.4 bits (107), Expect = 2e-05
 Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 1/87 (1%)

Query: 269 NYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNL 327
            Y     K+G+G +G V   T+   G+ VAVK++     Q  +  FNEV ++    H+N+
Sbjct: 20  TYLDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 79

Query: 328 VKLLGCSITGPESLLVYEFVPNQSLLD 354
           V++    + G E  +V EF+   +L D
Sbjct: 80  VEMYNSYLVGDELWVVMEFLEGGALTD 106

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 45.3 bits (107), Expect = 2e-05
 Identities = 31/84 (36%), Positives = 42/84 (50%), Gaps = 9/84 (10%)

Query: 277 LGQGGSGSVYKGT------LPGGEAVAVKRLFYNTTQW-VDHFFNEVNLISGINHKNLVK 329
           LG+G  G V K T        G   VAVK L  N +   +    +E NL+  +NH +++K
Sbjct: 8   LGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIK 67

Query: 330 LLG-CSITGPESLLVYEFVPNQSL 352
           L G CS  GP  LL+ E+    SL
Sbjct: 68  LYGACSQDGP-LLLIVEYAKYGSL 90

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 45.3 bits (107), Expect = 2e-05
 Identities = 34/99 (34%), Positives = 45/99 (45%), Gaps = 16/99 (16%)

Query: 270 YFHESNKLGQGGSGSV----YKGTLPG-GEAVAVKRL-----FYNTTQWVDHFFNEVNLI 319
           Y  +   LG+G  G V    Y     G GE VAVK L       NT+ W      E+N++
Sbjct: 5   YLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWK----KEINIL 60

Query: 320 SGINHKNLVKLLGCSITGPES--LLVYEFVPNQSLLDNL 356
             + H+N+VK  GC          L+ E+VP  SL D L
Sbjct: 61  KTLYHENIVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYL 99

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 45.2 bits (107), Expect = 2e-05
 Identities = 35/89 (39%), Positives = 45/89 (50%), Gaps = 10/89 (11%)

Query: 277 LGQGGSGSVYKGTL-----PGGEA--VAVKRLFYNTT-QWVDHFFNEVNLISGINHKNLV 328
           LG G  G VY+GT      PG     VAVK L    T Q    F  E +L+S  NH N+V
Sbjct: 3   LGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIV 62

Query: 329 KLLG-CSITGPESLLVYEFVPNQSLLDNL 356
           KLLG C +  P+ +++ E +    LL  L
Sbjct: 63  KLLGVCLLNEPQYIIM-ELMEGGDLLSYL 90

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 45.1 bits (107), Expect = 3e-05
 Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 13/90 (14%)

Query: 277 LGQGGSGSVYK--------GTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLV 328
           LG+G  GSV           T   GE VAVK+L ++T + +  F  E+ ++  + H N+V
Sbjct: 12  LGKGNFGSVELCRYDPLQDNT---GEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIV 68

Query: 329 KLLG-CSITGPESL-LVYEFVPNQSLLDNL 356
           K  G C   G  +L LV E++P  SL D L
Sbjct: 69  KYKGVCYSAGRRNLRLVMEYLPYGSLRDYL 98

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 44.6 bits (105), Expect = 3e-05
 Identities = 29/84 (34%), Positives = 40/84 (47%), Gaps = 1/84 (1%)

Query: 277 LGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVD-HFFNEVNLISGINHKNLVKLLGCSI 335
           LG+G  G V+KGTL     VAVK    +  Q +   F +E  ++   +H N+VKL+G   
Sbjct: 3   LGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCT 62

Query: 336 TGPESLLVYEFVPNQSLLDNLFDK 359
                 +V E VP    L  L  K
Sbjct: 63  QRQPIYIVMELVPGGDFLSFLRKK 86

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4

 Score = 44.3 bits (104), Expect = 4e-05
 Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 7/84 (8%)

Query: 277 LGQGGSGSVYKGT-LPGGEAV----AVKRLFYNTTQWVD-HFFNEVNLISGINHKNLVKL 330
           LG G  G+VYKG  +P GE V    A+K L   T    +  F +E  +++ ++H +LV+L
Sbjct: 15  LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 74

Query: 331 LGCSITGPESLLVYEFVPNQSLLD 354
           LG  ++ P   LV + +P+  LLD
Sbjct: 75  LGVCLS-PTIQLVTQLMPHGCLLD 97

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 44.4 bits (105), Expect = 4e-05
 Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 4/85 (4%)

Query: 271 FHESNKLGQGGSGSVYKG-TLPGGEAVAVKRLFYNT-TQWV-DHFFNEVNLISGINHKNL 327
           F +  K+G+G  G VYK      GE VA+K++  +T T+ V      E++L+  +NH N+
Sbjct: 2   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 61

Query: 328 VKLLGCSITGPESLLVYEFVPNQSL 352
           VKLL    T  +  LV+EF+ +Q L
Sbjct: 62  VKLLDVIHTENKLYLVFEFL-HQDL 85

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 44.3 bits (105), Expect = 5e-05
 Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 7/77 (9%)

Query: 277 LGQGGSGSVYKGTLPG---GEA---VAVKRLFYNTT-QWVDHFFNEVNLISGINHKNLVK 329
           LGQG  G VY+G   G   GE    VA+K +  N + +    F NE +++   N  ++V+
Sbjct: 14  LGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVR 73

Query: 330 LLGCSITGPESLLVYEF 346
           LLG   TG  +L+V E 
Sbjct: 74  LLGVVSTGQPTLVVMEL 90

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 44.0 bits (104), Expect = 6e-05
 Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 11/109 (10%)

Query: 247 ALQVAVNKSKLNFSYETLEKATNYFHESNKLGQGGSGSVYKGT-LPGGEAVAVKRLFYNT 305
           ALQ+ V+        +      N+     K+G+G +G V   T    G  VAVK++    
Sbjct: 7   ALQLVVDPG------DPRSYLDNF----VKIGEGSTGIVCIATDKSTGRQVAVKKMDLRK 56

Query: 306 TQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQSLLD 354
            Q  +  FNEV ++    H N+V++    + G E  +V EF+   +L D
Sbjct: 57  QQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEGGALTD 105

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 43.5 bits (102), Expect = 9e-05
 Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 1/80 (1%)

Query: 276 KLGQGGSGSVYKGTLP-GGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCS 334
           K+G+G +G V   T    G+ VAVK++     Q  +  FNEV ++   +H+N+V +    
Sbjct: 29  KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSY 88

Query: 335 ITGPESLLVYEFVPNQSLLD 354
           + G E  +V EF+   +L D
Sbjct: 89  LVGDELWVVMEFLEGGALTD 108

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 43.6 bits (102), Expect = 9e-05
 Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 5/91 (5%)

Query: 265 EKATNYFHESNKLGQGGSGSVYKGT-LPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGIN 323
           +K T Y     K+GQG SG+V+    +  G+ VA+K++        +   NE+ ++  + 
Sbjct: 19  KKYTRY----EKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELK 74

Query: 324 HKNLVKLLGCSITGPESLLVYEFVPNQSLLD 354
           + N+V  L   + G E  +V E++   SL D
Sbjct: 75  NPNIVNFLDSFLVGDELFVVMEYLAGGSLTD 105

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 43.1 bits (101), Expect = 1e-04
 Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 10/95 (10%)

Query: 276 KLGQGGSGSVYKG--TLPG---GEAVAVKRL--FYNTTQWVDHFFNEVNLISGINHKNLV 328
           +LG+   G +YKG   LPG    + VA+K L    N  QW + F  E +L++ ++H N+V
Sbjct: 12  ELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGE-FQQEASLMAELHHPNIV 70

Query: 329 KLLGCSITGPESLLVYEFVPNQSLLDNLFDKMLSP 363
            LLG         +++E++    L + L   M SP
Sbjct: 71  CLLGVVTQEQPVCMLFEYLNQGDLHEFLI--MRSP 103

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 43.4 bits (102), Expect = 1e-04
 Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 1/80 (1%)

Query: 276 KLGQGGSGSVYKGT-LPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCS 334
           K+GQG SG+VY    +  G+ VA+K++        +   NE+ ++    H N+V  L   
Sbjct: 26  KIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSY 85

Query: 335 ITGPESLLVYEFVPNQSLLD 354
           + G E  +V E++   SL D
Sbjct: 86  LVGDELWVVMEYLAGGSLTD 105

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 43.0 bits (101), Expect = 1e-04
 Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 6/84 (7%)

Query: 275 NKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTT------QWVDHFFNEVNLISGINHKNLV 328
             LG+G  G+VY G    G+ +AVK++  +T+      +  +    EV+L+  + H N+V
Sbjct: 6   EVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIV 65

Query: 329 KLLGCSITGPESLLVYEFVPNQSL 352
           + LG  +      +  EFVP  S+
Sbjct: 66  QYLGTCLDDNTISIFMEFVPGGSI 89

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 42.9 bits (101), Expect = 1e-04
 Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 7/78 (8%)

Query: 277 LGQGGSGSVYKGTLPG---GEA---VAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVK 329
           +GQG  G V++   PG    E    VAVK L    +      F  E  L++  +H N+VK
Sbjct: 13  IGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVK 72

Query: 330 LLGCSITGPESLLVYEFV 347
           LLG    G    L++E++
Sbjct: 73  LLGVCAVGKPMCLLFEYM 90

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 42.3 bits (99), Expect = 2e-04
 Identities = 28/81 (34%), Positives = 36/81 (44%), Gaps = 1/81 (1%)

Query: 276 KLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSI 335
           KLG G  G V+ G       VAVK L   T   V  F  E NL+  + H  LV+L     
Sbjct: 13  KLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMS-VQAFLEEANLMKTLQHDKLVRLYAVVT 71

Query: 336 TGPESLLVYEFVPNQSLLDNL 356
                 ++ E++   SLLD L
Sbjct: 72  KEEPIYIITEYMAKGSLLDFL 92

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 42.3 bits (99), Expect = 2e-04
 Identities = 30/83 (36%), Positives = 39/83 (46%), Gaps = 2/83 (2%)

Query: 276 KLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSI 335
           KLG G  G V+ GT  G   VAVK L   T    + F  E  ++  + H  LV+L     
Sbjct: 13  KLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMS-PESFLEEAQIMKKLRHDKLVQLYAVVS 71

Query: 336 TGPESLLVYEFVPNQSLLDNLFD 358
             P   +V E++   SLLD L D
Sbjct: 72  EEP-IYIVTEYMSKGSLLDFLKD 93

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 42.0 bits (99), Expect = 2e-04
 Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 3/82 (3%)

Query: 276 KLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLG-CS 334
           KLG G  G V++G       VAVK L   T      F  E  ++  + H  L++L   C+
Sbjct: 13  KLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMD-PKDFLAEAQIMKKLRHPKLIQLYAVCT 71

Query: 335 ITGPESLLVYEFVPNQSLLDNL 356
           +  P   +V E +   SLL+ L
Sbjct: 72  LEEP-IYIVTELMKYGSLLEYL 92

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 41.7 bits (99), Expect = 3e-04
 Identities = 31/98 (31%), Positives = 43/98 (43%), Gaps = 19/98 (19%)

Query: 276 KLGQGGSGSVYKGT-LPGGEAVAVKRL--------FYNTTQWVDHFFNEVNLISGINHKN 326
           KLG+G  G VYK      GE VA+K++          +T         E++L+  + H N
Sbjct: 6   KLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTA------LREISLLKELKHPN 59

Query: 327 LVKLLGCSITGPESL-LVYEFVPNQSLLDNLFDKMLSP 363
           +VKLL   I     L LV+E+      L    DK   P
Sbjct: 60  IVKLL-DVIHTERKLYLVFEYCDMD--LKKYLDKRPGP 94

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 41.7 bits (98), Expect = 3e-04
 Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 5/82 (6%)

Query: 277 LGQGGSGSVYKGT-LPGGEAVAVKRLFYNTTQW-VDHFFNEVNLISGINH---KNLVKLL 331
           +G+G  G+VY+G  +P G  VA+K +  +T    V     EV L+S +      N+ K  
Sbjct: 9   IGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYY 68

Query: 332 GCSITGPESLLVYEFVPNQSLL 353
           G  + GP   ++ E+    S+ 
Sbjct: 69  GSYLKGPRLWIIMEYAEGGSVR 90

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|133209 cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 41.8 bits (98), Expect = 3e-04
 Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 8/84 (9%)

Query: 277 LGQGGSGSVYKG----TLPGGEA----VAVKRLFYNTTQWVDHFFNEVNLISGINHKNLV 328
           LGQG    ++KG        GE     V +K L  +   + + FF   +++S ++HK+LV
Sbjct: 3   LGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLV 62

Query: 329 KLLGCSITGPESLLVYEFVPNQSL 352
              G  + G ES++V E+V   SL
Sbjct: 63  LNYGVCVCGDESIMVQEYVKFGSL 86

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 258

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 41.5 bits (98), Expect = 3e-04
 Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 3/80 (3%)

Query: 276 KLGQGGSGSVYKGT-LPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCS 334
           KLG+G  GSVYK      G+ VA+K       + +     E++++   +   +VK  G  
Sbjct: 10  KLGEGSYGSVYKAIHKETGQVVAIK--VVPVEEDLQEIIKEISILKQCDSPYIVKYYGSY 67

Query: 335 ITGPESLLVYEFVPNQSLLD 354
               +  +V E+    S+ D
Sbjct: 68  FKNTDLWIVMEYCGAGSVSD 87

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 41.6 bits (97), Expect = 3e-04
 Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 2/81 (2%)

Query: 276 KLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSI 335
           KLGQG  G V+ GT  G   VA+K L   T    + F  E  ++  + H+ LV+L     
Sbjct: 13  KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVVS 71

Query: 336 TGPESLLVYEFVPNQSLLDNL 356
             P   +V E++   SLLD L
Sbjct: 72  EEP-IYIVTEYMSKGSLLDFL 91

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 41.7 bits (98), Expect = 3e-04
 Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 4/93 (4%)

Query: 271 FHESNK---LGQGGSGSVYKG-TLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKN 326
           + E+ +   LG+G  G VY    L     +A+K +    +++V     E+ L S + H+N
Sbjct: 7   YDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRN 66

Query: 327 LVKLLGCSITGPESLLVYEFVPNQSLLDNLFDK 359
           +V+ LG         +  E VP  SL   L  K
Sbjct: 67  IVQYLGSDSENGFFKIFMEQVPGGSLSALLRSK 99

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 41.9 bits (99), Expect = 3e-04
 Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 7/66 (10%)

Query: 271 FHESNKLGQGGSGSVYKG-TLPGGEAVAVKRLFYNTTQWVDHF----FNEVNLISGINHK 325
           +    KLG+G  G VYK   +  G  VA+K++  +  +  D F      E+ ++  + H 
Sbjct: 10  YEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEK--DGFPITALREIKILKKLKHP 67

Query: 326 NLVKLL 331
           N+V L+
Sbjct: 68  NVVPLI 73

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 41.5 bits (97), Expect = 4e-04
 Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 5/84 (5%)

Query: 267 ATNYFHESNKLGQGGSGSVYKG-TLPGGEAVAVKRLFYNTTQWVDHF-FNEVNLISGINH 324
           AT+Y +   KLG+G   +VYKG +   G+ VA+K +   T + V      E +L+ G+ H
Sbjct: 4   ATSYLN-LEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKH 62

Query: 325 KNLVKLLGCSITGPESL-LVYEFV 347
            N+V LL   I   E+L  V+E++
Sbjct: 63  ANIV-LLHDIIHTKETLTFVFEYM 85

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 40.8 bits (95), Expect = 5e-04
 Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 2/81 (2%)

Query: 276 KLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSI 335
           KLG G  G V+  T      VAVK +   +   V+ F  E N++  + H  LVK L   +
Sbjct: 13  KLGAGQFGEVWMATYNKHTKVAVKTMKPGSMS-VEAFLAEANVMKTLQHDKLVK-LHAVV 70

Query: 336 TGPESLLVYEFVPNQSLLDNL 356
           T     ++ EF+   SLLD L
Sbjct: 71  TKEPIYIITEFMAKGSLLDFL 91

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 40.8 bits (95), Expect = 6e-04
 Identities = 30/81 (37%), Positives = 38/81 (46%), Gaps = 2/81 (2%)

Query: 276 KLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSI 335
           KLGQG  G V+ GT  G   VA+K L   T    + F  E  ++  + H  LV L     
Sbjct: 13  KLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMM-PEAFLQEAQIMKKLRHDKLVPLYAVVS 71

Query: 336 TGPESLLVYEFVPNQSLLDNL 356
             P   +V EF+   SLLD L
Sbjct: 72  EEP-IYIVTEFMGKGSLLDFL 91

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 40.5 bits (95), Expect = 6e-04
 Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 8/84 (9%)

Query: 277 LGQGGSGSVYKG-TLPGGEAVAVKRLF-----YNTTQWVDHFFNEVNLISGINHKNLVKL 330
           LG G  GSVY+G  L  G+  AVK +          + V     E+ L+S + H N+V+ 
Sbjct: 8   LGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQY 67

Query: 331 LGCSITGPESLLVY-EFVPNQSLL 353
           LG      ++L ++ E VP  SL 
Sbjct: 68  LGTEREE-DNLYIFLELVPGGSLA 90

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 40.6 bits (95), Expect = 8e-04
 Identities = 26/87 (29%), Positives = 47/87 (54%), Gaps = 8/87 (9%)

Query: 277 LGQGGSGSVYKG-TLPGGEAVAVKRLFYN-----TTQWVDHFFNEVNLISGINHKNLVKL 330
           LGQG  G VY    +  G  +AVK++ ++     T + V+    E+ L+  + H+ +V+ 
Sbjct: 10  LGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQY 69

Query: 331 LGCSITGPESLLVY-EFVPNQSLLDNL 356
            GC +   E+L ++ E++P  S+ D L
Sbjct: 70  YGC-LRDDETLSIFMEYMPGGSVKDQL 95

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional

 Score = 41.0 bits (96), Expect = 8e-04
 Identities = 38/144 (26%), Positives = 71/144 (49%), Gaps = 12/144 (8%)

Query: 215 TSAVALLLVFSLVAF---FVR-RKLLQKRRERKQLGALQVAVNKSKLNFSYETLEKATNY 270
           T  +   LV +LVAF   F+R R  L+ +R   + G  ++    SK++ S  T+    + 
Sbjct: 633 TCTLGAFLVLALVAFGFVFIRGRNNLELKRVENEDGTWELQFFDSKVSKSI-TINDILSS 691

Query: 271 FHESNKLGQGGSGSVYKG-TLPGGEAVAVKRLF-YNTTQWVDHFFNEVNLISGINHKNLV 328
             E N + +G  G+ YKG ++  G    VK +   N+        +E+  +  + H N+V
Sbjct: 692 LKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSIP-----SSEIADMGKLQHPNIV 746

Query: 329 KLLGCSITGPESLLVYEFVPNQSL 352
           KL+G   +   + L++E++  ++L
Sbjct: 747 KLIGLCRSEKGAYLIHEYIEGKNL 770

Length = 968

>gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases

 Score = 40.2 bits (94), Expect = 9e-04
 Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 12/93 (12%)

Query: 277 LGQGGSGSVYKGTLPGGEA----VAVK--RLFYNTTQWVDHFFNEVNLISGINHKNLVKL 330
           LG+G  GSV +G L   +     VAVK  +L  +T   ++ F +E   +   +H N++KL
Sbjct: 7   LGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKL 66

Query: 331 LGCSITG------PESLLVYEFVPNQSLLDNLF 357
           +G           P+ +++  F+ +  L   L 
Sbjct: 67  IGVCFEASSLQKIPKPMVILPFMKHGDLHSFLL 99

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 40.0 bits (94), Expect = 0.001
 Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 7/82 (8%)

Query: 277 LGQGGSGSVYKGTL--PGGE--AVAVKRLF--YNTTQWVDHFFNEVNLISGINHKNLVKL 330
           +G G  G V +G L  PG +   VA+K L    +  Q +D F  E +++   +H N+++L
Sbjct: 12  IGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLD-FLTEASIMGQFDHPNIIRL 70

Query: 331 LGCSITGPESLLVYEFVPNQSL 352
            G        +++ E++ N SL
Sbjct: 71  EGVVTKSRPVMIITEYMENGSL 92

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 40.1 bits (94), Expect = 0.001
 Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 3/81 (3%)

Query: 277 LGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLG-CSI 335
           LG G  G V+ G   G   VA+K +        D F  E  ++  ++H NLV+L G C+ 
Sbjct: 12  LGSGQFGVVHLGKWRGKIDVAIKMIREGAMS-EDDFIEEAKVMMKLSHPNLVQLYGVCTK 70

Query: 336 TGPESLLVYEFVPNQSLLDNL 356
             P   +V E++ N  LL+ L
Sbjct: 71  QRP-IFIVTEYMANGCLLNYL 90

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 40.0 bits (93), Expect = 0.001
 Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 7/89 (7%)

Query: 277 LGQGGSGSVYKGTL--PGGE--AVAVKRLF--YNTTQWVDHFFNEVNLISGINHKNLVKL 330
           +G G  G V++G L  PG +  AVA+K L   Y   Q  D F +E +++   +H N+++L
Sbjct: 13  IGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQD-FLSEASIMGQFSHHNIIRL 71

Query: 331 LGCSITGPESLLVYEFVPNQSLLDNLFDK 359
            G       ++++ E++ N +L   L D 
Sbjct: 72  EGVVTKFKPAMIITEYMENGALDKYLRDH 100

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 40.2 bits (94), Expect = 0.001
 Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 9/93 (9%)

Query: 259 FSYETLEKATNYFHESNKLGQGGSGSVYKGT-LPGGEAVAVKRLFYNTTQ----WVDHFF 313
           FS +  EK      E   +G G  G+VY    +   E VA+K++ Y+  Q    W D   
Sbjct: 8   FSKDDPEKLFTDLRE---IGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQD-II 63

Query: 314 NEVNLISGINHKNLVKLLGCSITGPESLLVYEF 346
            EV  +  + H N ++  GC +    + LV E+
Sbjct: 64  KEVRFLQQLRHPNTIEYKGCYLREHTAWLVMEY 96

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 40.1 bits (93), Expect = 0.001
 Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 1/80 (1%)

Query: 276 KLGQGGSGSVYKG-TLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCS 334
           K+GQG SG+VY    +  G+ VA+K++        +   NE+ ++    + N+V  L   
Sbjct: 26  KIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 85

Query: 335 ITGPESLLVYEFVPNQSLLD 354
           + G E  +V E++   SL D
Sbjct: 86  LVGDELWVVMEYLAGGSLTD 105

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 39.4 bits (92), Expect = 0.002
 Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 13/88 (14%)

Query: 277 LGQGGSGSVYKG-TLPGGEAVAVKRLFYNTTQ----------WVDHFFNEVNLISGINHK 325
           +G+G  G VY    +  GE +AVK++    T            V    +E+  +  ++H 
Sbjct: 9   IGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHL 68

Query: 326 NLVKLLGCSITGPESLLVY-EFVPNQSL 352
           N+V+ LG   T  E L ++ E+VP  S+
Sbjct: 69  NIVQYLGFE-TTEEYLSIFLEYVPGGSI 95

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 39.0 bits (91), Expect = 0.002
 Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 7/67 (10%)

Query: 275 NKLGQGGSGSVYKGTLPGGE------AVAVKRL-FYNTTQWVDHFFNEVNLISGINHKNL 327
             LG G  G VY+G   G +       VAVK L    + Q    F  E  ++S  NH+N+
Sbjct: 12  RALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNI 71

Query: 328 VKLLGCS 334
           V+L+G S
Sbjct: 72  VRLIGVS 78

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 39.0 bits (91), Expect = 0.002
 Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 1/69 (1%)

Query: 271 FHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKL 330
           F    KLG G  G V++G       VA+K L  +       F  EV  +  + HK+L+ L
Sbjct: 8   FTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISL 67

Query: 331 LG-CSITGP 338
              CS+  P
Sbjct: 68  FAVCSVGEP 76

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2

 Score = 38.8 bits (90), Expect = 0.003
 Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 7/84 (8%)

Query: 277 LGQGGSGSVYKGT-LPGGE----AVAVKRLFYNTTQWVD-HFFNEVNLISGINHKNLVKL 330
           LG G  G+VYKG  +P GE     VA+K L  NT+   +    +E  +++G+    + +L
Sbjct: 15  LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRL 74

Query: 331 LGCSITGPESLLVYEFVPNQSLLD 354
           LG  +T     LV + +P   LLD
Sbjct: 75  LGICLTSTVQ-LVTQLMPYGCLLD 97

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 38.7 bits (90), Expect = 0.003
 Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 13/92 (14%)

Query: 277 LGQGGSGSVYKG-TLPGGEAVAVKRLFYNT---------TQWVDHFFNEVNLISGINHKN 326
           +G G  GSVY G     GE +AVK++   +            +D    E+ L+  + H+N
Sbjct: 8   IGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHEN 67

Query: 327 LVKLLGCSITGPESLLVYEFVPN---QSLLDN 355
           +V+ LG S+      +  E+VP     +LL+N
Sbjct: 68  IVQYLGSSLDADHLNIFLEYVPGGSVAALLNN 99

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 38.8 bits (91), Expect = 0.003
 Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 3/81 (3%)

Query: 271 FHESNKLGQGGSGSVYKGT-LPGGEAVAVKRL-FYNTTQWVDH-FFNEVNLISGINHKNL 327
           +    ++G+G  G V+K      GE VA+K++        + +    E+  +    H  +
Sbjct: 2   YKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYV 61

Query: 328 VKLLGCSITGPESLLVYEFVP 348
           VKLL     G   +LV E++P
Sbjct: 62  VKLLDVFPHGSGFVLVMEYMP 82

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 38.6 bits (89), Expect = 0.003
 Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 1/80 (1%)

Query: 276 KLGQGGSGSVYKGT-LPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCS 334
           K+GQG SG+VY    +  G+ VA++++        +   NE+ ++    + N+V  L   
Sbjct: 27  KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 86

Query: 335 ITGPESLLVYEFVPNQSLLD 354
           + G E  +V E++   SL D
Sbjct: 87  LVGDELWVVMEYLAGGSLTD 106

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

 Score = 38.4 bits (89), Expect = 0.004
 Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 7/90 (7%)

Query: 271 FHESNKLGQGGSGSVYKGT-LPGGE----AVAVKRLFYNTTQWVD-HFFNEVNLISGINH 324
           F +   LG G  G+VYKG  +P GE     VA+K L   T+   +    +E  +++ +++
Sbjct: 9   FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 68

Query: 325 KNLVKLLGCSITGPESLLVYEFVPNQSLLD 354
            ++ +LLG  +T     L+ + +P   LLD
Sbjct: 69  PHVCRLLGICLTSTVQ-LITQLMPFGCLLD 97

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 38.2 bits (89), Expect = 0.004
 Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 5/72 (6%)

Query: 277 LGQGGSGSVYKGTL----PGGEAVAVKRLFYNT-TQWVDHFFNEVNLISGINHKNLVKLL 331
           +G+G  G VY GTL          AVK L   T  + V+ F  E  ++   +H N++ LL
Sbjct: 3   IGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLL 62

Query: 332 GCSITGPESLLV 343
           G  +    S LV
Sbjct: 63  GICLPSEGSPLV 74

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	363
KOG1187	361	consensus Serine/threonine protein kinase [Signal	99.82
PF01657	106	Stress-antifung: Salt stress response/antifungal;	99.81
PF01657	106	Stress-antifung: Salt stress response/antifungal;	99.79
KOG0595	429	consensus Serine/threonine-protein kinase involved	99.73
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.68
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.65
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.64
KOG3653	534	consensus Transforming growth factor beta/activin	99.63
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.57
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.56
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.54
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	99.53
KOG0192	362	consensus Tyrosine kinase specific for activated (	99.53
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.52
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.51
KOG0575	592	consensus Polo-like serine/threonine protein kinas	99.5
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.47
KOG0605	550	consensus NDR and related serine/threonine kinases	99.46
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	99.43
KOG0598	357	consensus Ribosomal protein S6 kinase and related	99.41
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.41
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	99.41
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.4
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.4
KOG0581	364	consensus Mitogen-activated protein kinase kinase	99.38
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.38
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.37
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	99.36
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	99.36
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.35
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.35
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.35
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.34
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.34
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.34
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.33
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.33
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.33
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.33
KOG0611	668	consensus Predicted serine/threonine protein kinas	99.33
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.32
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.32
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.32
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.32
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.31
PHA02988	283	hypothetical protein; Provisional	99.31
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.31
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.3
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.3
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.29
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.29
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.28
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.28
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.28
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	99.28
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.27
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.27
KOG0586	596	consensus Serine/threonine protein kinase [General	99.27
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.26
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.26
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.26
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.26
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.25
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.25
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.25
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.25
KOG0583	370	consensus Serine/threonine protein kinase [Signal	99.25
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.25
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.25
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	99.25
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.25
KOG0661	538	consensus MAPK related serine/threonine protein ki	99.25
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.24
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.24
KOG0578	550	consensus p21-activated serine/threonine protein k	99.24
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.23
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.23
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.23
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	99.23
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.23
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.23
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.23
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.23
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.22
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.22
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.22
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.22
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.22
KOG0610	459	consensus Putative serine/threonine protein kinase	99.22
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.22
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.22
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.22
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.22
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.22
KOG0582	516	consensus Ste20-like serine/threonine protein kina	99.21
KOG0198	313	consensus MEKK and related serine/threonine protei	99.21
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.21
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.21
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.21
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.21
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.21
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.21
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.21
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.21
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.2
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.2
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.2
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.2
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.2
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	99.2
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.2
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.2
PTZ00267	478	NIMA-related protein kinase; Provisional	99.2
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.19
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.19
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.19
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.19
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.19
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.19
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.19
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.19
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.19
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.18
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.18
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.18
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.18
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.18
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.18
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.18
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.18
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.18
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.18
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.17
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.17
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.17
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.17
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.17
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.17
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.17
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.17
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.17
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.17
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.16
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.16
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.16
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.16
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.16
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.16
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.16
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.16
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.16
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.16
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.15
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.15
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.15
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.15
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.15
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.15
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.15
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.14
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.14
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.14
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.14
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.14
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.14
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.14
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.14
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.14
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.14
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.14
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.14
KOG0694	694	consensus Serine/threonine protein kinase [Signal	99.13
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.13
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.13
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.13
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.13
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.13
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.13
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.13
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.13
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.13
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.13
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.12
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.12
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.12
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.12
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.12
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.12
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	99.12
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.12
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.12
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.12
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.12
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.12
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.12
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.12
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.11
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.11
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.11
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.1
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.1
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.1
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.1
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.1
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.1
KOG1989	738	consensus ARK protein kinase family [Signal transd	99.1
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.1
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.1
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.1
KOG0589	426	consensus Serine/threonine protein kinase [General	99.1
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.1
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.1
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.1
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.1
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.1
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.1
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.1
KOG0201	467	consensus Serine/threonine protein kinase [Signal	99.1
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.09
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.09
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.09
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.09
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.09
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.09
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.09
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.09
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.09
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.09
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.08
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.08
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.08
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.08
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.08
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.08
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.08
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.08
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.08
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.07
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.07
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	99.07
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.07
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.07
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.07
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	99.07
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.07
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.07
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	99.06
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.06
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.06
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.06
KOG4717	864	consensus Serine/threonine protein kinase [Signal	99.06
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.06
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.06
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.06
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.05
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.05
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.05
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.05
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.05
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.05
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.05
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.05
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.04
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.04
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.04
PRK09188	365	serine/threonine protein kinase; Provisional	99.04
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.04
KOG0577	948	consensus Serine/threonine protein kinase [Signal	99.04
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.04
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.04
PTZ00283	496	serine/threonine protein kinase; Provisional	99.04
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.03
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.03
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.03
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.02
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.02
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.02
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.02
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.01
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.01
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.01
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.01
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.01
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.01
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.01
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.01
PHA03212	391	serine/threonine kinase US3; Provisional	99.01
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.0
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.0
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.0
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.0
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	98.99
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	98.99
PLN03224	507	probable serine/threonine protein kinase; Provisio	98.99
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	98.98
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	98.98
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	98.98
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	98.98
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	98.98
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	98.97
PLN00009	294	cyclin-dependent kinase A; Provisional	98.97
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	98.97
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	98.96
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	98.96
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	98.96
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	98.95
PRK10345	210	hypothetical protein; Provisional	98.95
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	98.95
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	98.95
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	98.95
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	98.94
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	98.94
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	98.94
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	98.94
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	98.93
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	98.93
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	98.92
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	98.92
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	98.91
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	98.91
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	98.91
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	98.91
PTZ00024	335	cyclin-dependent protein kinase; Provisional	98.91
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	98.91
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	98.9
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	98.9
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	98.89
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	98.89
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	98.89
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	98.88
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	98.88
PTZ00036	440	glycogen synthase kinase; Provisional	98.88
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	98.87
PHA03211	461	serine/threonine kinase US3; Provisional	98.87
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	98.87
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	98.86
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	98.86
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	98.86
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	98.86
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	98.85
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	98.84
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	98.84
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	98.83
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	98.83
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	98.83
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	98.83
KOG0690	516	consensus Serine/threonine protein kinase [Signal	98.83
PHA03209	357	serine/threonine kinase US3; Provisional	98.83
KOG0584	632	consensus Serine/threonine protein kinase [General	98.82
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	98.82
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	98.82
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	98.82
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	98.82
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	98.82
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	98.81
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	98.81
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	98.81
PHA03207	392	serine/threonine kinase US3; Provisional	98.8
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	98.79
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	98.79
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	98.78
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	98.78
KOG0576	829	consensus Mitogen-activated protein kinase kinase	98.78
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	98.77
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	98.74
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	98.74
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	98.73
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	98.73
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	98.72
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	98.72
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	98.72
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	98.72
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	98.71
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	98.71
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	98.7
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	98.7
KOG0695	593	consensus Serine/threonine protein kinase [Signal	98.69
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	98.68
PTZ00284	467	protein kinase; Provisional	98.66
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	98.64
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	98.62
PRK14879	211	serine/threonine protein kinase; Provisional	98.62
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	98.61
PHA03210	501	serine/threonine kinase US3; Provisional	98.61
KOG1152	772	consensus Signal transduction serine/threonine kin	98.61
KOG0596	677	consensus Dual specificity; serine/threonine and t	98.61
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	98.6
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	98.58
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	98.56
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	98.55
PRK09605	535	bifunctional UGMP family protein/serine/threonine	98.53
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	98.53
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	98.52
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	98.52
KOG0696	683	consensus Serine/threonine protein kinase [Signal	98.51
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	98.46
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	98.38
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	98.35
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	98.22
smart00090	237	RIO RIO-like kinase.	98.21
KOG1167	418	consensus Serine/threonine protein kinase of the C	98.16
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	98.15
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	98.13
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	98.12
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	98.11
KOG1290	590	consensus Serine/threonine protein kinase [Signal	98.07
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	97.97
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	97.94
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	97.94
KOG1027	903	consensus Serine/threonine protein kinase and endo	97.92
PRK12274	218	serine/threonine protein kinase; Provisional	97.88
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	97.85
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	97.8
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	97.8
PHA02882	294	putative serine/threonine kinase; Provisional	97.78
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	97.77
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	97.72
COG0515	384	SPS1 Serine/threonine protein kinase [General func	97.67
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	97.64
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	97.59
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	97.57
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	97.54
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	97.52
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	97.51
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	97.3
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	97.26
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	97.14
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	96.87
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	96.26
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	96.12
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	95.36
COG0661	517	AarF Predicted unusual protein kinase [General fun	95.32
KOG1243	690	consensus Protein kinase [General function predict	94.42
PF03109	119	ABC1: ABC1 family; InterPro: IPR004147 This entry	94.31
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	94.16
PRK10593	297	hypothetical protein; Provisional	94.12
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	94.09
KOG1235	538	consensus Predicted unusual protein kinase [Genera	93.15
PRK09550	401	mtnK methylthioribose kinase; Reviewed	93.11
PLN02876	822	acyl-CoA dehydrogenase	93.05
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	92.77
KOG3087	229	consensus Serine/threonine protein kinase [General	92.71
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	92.68
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	92.44
COG0478	304	RIO-like serine/threonine protein kinase fused to	92.38
PF08693	40	SKG6: Transmembrane alpha-helix domain; InterPro:	92.21
PF01636	239	APH: Phosphotransferase enzyme family This family	91.6
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	91.23
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	90.64
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	90.29
PF01102	122	Glycophorin_A: Glycophorin A; InterPro: IPR001195	89.95
PF02439	38	Adeno_E3_CR2: Adenovirus E3 region protein CR2; In	89.03
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	88.88
PHA03265	402	envelope glycoprotein D; Provisional	88.23
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	87.86
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	86.51
PF15102	146	TMEM154: TMEM154 protein family	85.0
KOG0590	601	consensus Checkpoint kinase and related serine/thr	84.58
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	84.37
PF02009	299	Rifin_STEVOR: Rifin/stevor family; InterPro: IPR00	83.17
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	81.44
PF15050	133	SCIMP: SCIMP protein	80.87
COG3001	286	Uncharacterized protein conserved in bacteria [Fun	80.78
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	80.05

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.82  E-value=5.3e-20  Score=171.78  Aligned_cols=106  Identities=53%  Similarity=0.794  Sum_probs=96.0

Q ss_pred             cccccchHHHHHhccCCCcCceecccCceEEEEEEcCCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEE
Q 017984          255 SKLNFSYETLEKATNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCS  334 (363)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~  334 (363)
                      ....|++.++..+|++|+..+.||+|+||.||+|.+++|+.||||++.....+...+|.+|+.++.+++|||||+|+|||
T Consensus        61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC  140 (361)
T KOG1187|consen   61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC  140 (361)
T ss_pred             CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence            45569999999999999999999999999999999999999999988765433145599999999999999999999999


Q ss_pred             EeCC-eeEEEEEccCCCChhHHhhcCC
Q 017984          335 ITGP-ESLLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       335 ~~~~-~~~lv~Ey~~~gsL~~~l~~~~  360 (363)
                      .+.+ +.+||||||++|+|.++|+...
T Consensus       141 ~e~~~~~~LVYEym~nGsL~d~L~~~~  167 (361)
T KOG1187|consen  141 LEGGEHRLLVYEYMPNGSLEDHLHGKK  167 (361)
T ss_pred             ecCCceEEEEEEccCCCCHHHHhCCCC
Confidence            9988 5999999999999999999865

>PF01657 Stress-antifung: Salt stress response/antifungal; InterPro: IPR002902 This domain is found in plants and has no known function

Probab=99.81  E-value=2.5e-20  Score=143.45  Aligned_cols=76  Identities=39%  Similarity=0.888  Sum_probs=61.3

Q ss_pred             cccchhhhhc---cceeeecCCCCCceEEEEeecCCCChhhhHHHHHHHHHHHHhhCCCCcCcceeEEEccceEEEEcCC
Q 017984            2 DIVTPLIARQ---RYAAVVNGTGTASVYAFGECMKDLSPNDCNLCFAQCKTQVLKCLPFQLATRGGRVFYDGCYLRYDDY   78 (363)
Q Consensus         2 ~~l~~~~~~~---~~~~~~~g~~~~~vy~~~~C~~d~~~~~C~~Cl~~a~~~~~~~~~~~~~~~~~~~~~~~C~~ry~~~   78 (363)
                      +.|.+.++..   +|+++..|.+++++|||+||++|+++.+|..||+.|...+.++||+.   ++|++|++.|+|||+++
T Consensus        28 ~~l~~~a~~~~~~~f~~~~~~~~~~~vYgl~qC~~Dls~~dC~~Cl~~a~~~~~~~C~~~---~g~~v~~~~C~lRY~~~  104 (106)
T PF01657_consen   28 SSLVSNAASSSSKGFATGSAGSGPDTVYGLAQCRGDLSPSDCRACLADAVANISSCCPGS---RGGRVWYDSCFLRYENY  104 (106)
T ss_dssp             HHHHHHGGGTT-TEEEEEE--ST---EEEEEEE-TTS-HHHHHHHHHHHHCCHHHHTTSB---SSEEEEESSEEEEEESS
T ss_pred             HHHHHHHhhccccCcEEeecCCCCCeEEEEEEcCCCCChhhhHHHHHHHHHHHHHhCCCC---ceEEEECCCEEEEEECC
Confidence            4566666643   89999889999999999999999999999999999999999999997   99999999999999999


Q ss_pred             cc
Q 017984           79 DF   80 (363)
Q Consensus        79 ~f   80 (363)
                      +|
T Consensus       105 ~F  106 (106)
T PF01657_consen  105 PF  106 (106)
T ss_dssp             --
T ss_pred             CC
Confidence            87

The structure of this domain is known and it is thought to be involved in antifungal responses in plants []. Two copies of this domain are also found together in cysteine-rich protein kinases and cysteine-rich repeat secretory proteins. The domain contains four conserved cysteines.; PDB: 3A2E_D.

>PF01657 Stress-antifung: Salt stress response/antifungal; InterPro: IPR002902 This domain is found in plants and has no known function

Probab=99.79  E-value=2.9e-19  Score=137.57  Aligned_cols=89  Identities=38%  Similarity=0.679  Sum_probs=72.1

Q ss_pred             CchhhcccHHHHHHHHHHHhccC--CCeeeeeeeccCCCceEEEEEEecCCCChhhHHHHHHHHHHhhhh-cCCCCCeEE
Q 017984          101 NNTVFGANAIELVRNLSVQAVKN--DGFFVGSVTFSKGNVSVHGLAQCWEFVNGSACENCLENAVSRIAS-CTQKEEGRV  177 (363)
Q Consensus       101 ~~~~f~~~~~~ll~~l~~~a~~~--~~~~~~~~~~~~~~~~vygl~qC~~dl~~~~C~~Cl~~~~~~~~~-c~~~~~g~v  177 (363)
                      +++.|+.++..||..|...|+..  .+|++++.  +.++++||||+||++||++.+|..||+.++..+.. |....+|++
T Consensus        15 ~~~~f~~~l~~ll~~l~~~a~~~~~~~f~~~~~--~~~~~~vYgl~qC~~Dls~~dC~~Cl~~a~~~~~~~C~~~~g~~v   92 (106)
T PF01657_consen   15 DNSTFEQNLNSLLSSLVSNAASSSSKGFATGSA--GSGPDTVYGLAQCRGDLSPSDCRACLADAVANISSCCPGSRGGRV   92 (106)
T ss_dssp             TT-THHHHHHHHHHHHHHHGGGTT-TEEEEEE----ST---EEEEEEE-TTS-HHHHHHHHHHHHCCHHHHTTSBSSEEE
T ss_pred             CCchHHHHHHHHHHHHHHHHhhccccCcEEeec--CCCCCeEEEEEEcCCCCChhhhHHHHHHHHHHHHHhCCCCceEEE
Confidence            45569999999999999998754  68998886  35888999999999999999999999999999988 666889999


Q ss_pred             eCCCccccccccee
Q 017984          178 LNAGCYLRYSTQRF  191 (363)
Q Consensus       178 ~~~~C~~ry~~~~f  191 (363)
                      +..+|++||++++|
T Consensus        93 ~~~~C~lRY~~~~F  106 (106)
T PF01657_consen   93 WYDSCFLRYENYPF  106 (106)
T ss_dssp             EESSEEEEEESS--
T ss_pred             ECCCEEEEEECCCC
Confidence            99999999999887

The structure of this domain is known and it is thought to be involved in antifungal responses in plants []. Two copies of this domain are also found together in cysteine-rich protein kinases and cysteine-rich repeat secretory proteins. The domain contains four conserved cysteines.; PDB: 3A2E_D.

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.73  E-value=1.4e-17  Score=150.41  Aligned_cols=94  Identities=26%  Similarity=0.432  Sum_probs=84.6

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVY  344 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  344 (363)
                      ..+|.....||+|+|+.||+|++ .++..||||.+...  .+...+-+..|+++|+.++|||||.|+++.+.++.+||||
T Consensus         9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM   88 (429)
T KOG0595|consen    9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM   88 (429)
T ss_pred             cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence            45677888899999999999997 45899999999765  5666777999999999999999999999999999999999


Q ss_pred             EccCCCChhHHhhcCCC
Q 017984          345 EFVPNQSLLDNLFDKML  361 (363)
Q Consensus       345 Ey~~~gsL~~~l~~~~~  361 (363)
                      |||.||||.+||+.+..
T Consensus        89 EyC~gGDLs~yi~~~~~  105 (429)
T KOG0595|consen   89 EYCNGGDLSDYIRRRGR  105 (429)
T ss_pred             EeCCCCCHHHHHHHcCC
Confidence            99999999999998743

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.68  E-value=7.9e-17  Score=155.60  Aligned_cols=91  Identities=24%  Similarity=0.361  Sum_probs=80.5

Q ss_pred             CCCcCceecccCceEEEEEEcC----CCCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEE
Q 017984          270 YFHESNKLGQGGSGSVYKGTLP----GGEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVY  344 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~~~----~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  344 (363)
                      ...++++||.|.||+|++|.++    ....||||.|+.. ....+.+|+.|+.+|.+++||||++|.|+......++||.
T Consensus       630 ~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiT  709 (996)
T KOG0196|consen  630 CVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIIT  709 (996)
T ss_pred             heEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEh
Confidence            4567889999999999999973    2457999999975 4455678999999999999999999999999999999999


Q ss_pred             EccCCCChhHHhhcCC
Q 017984          345 EFVPNQSLLDNLFDKM  360 (363)
Q Consensus       345 Ey~~~gsL~~~l~~~~  360 (363)
                      |||++|+|+.||+.+.
T Consensus       710 EyMENGsLDsFLR~~D  725 (996)
T KOG0196|consen  710 EYMENGSLDSFLRQND  725 (996)
T ss_pred             hhhhCCcHHHHHhhcC
Confidence            9999999999998764

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.65  E-value=8.6e-17  Score=157.39  Aligned_cols=96  Identities=27%  Similarity=0.390  Sum_probs=83.6

Q ss_pred             HHhccCCCcCceecccCceEEEEEEc------CCCCEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCccceeeEEEeC
Q 017984          265 EKATNYFHESNKLGQGGSGSVYKGTL------PGGEAVAVKRLFYNT-TQWVDHFFNEVNLISGINHKNLVKLLGCSITG  337 (363)
Q Consensus       265 ~~~~~~~~~~~~lg~G~~g~Vy~~~~------~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~  337 (363)
                      ...+.+....+.||+|.||+||+|..      ++.+.||||.++... .+..++|.+|+++|..++|||||+|+|+|..+
T Consensus       482 ~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~  561 (774)
T KOG1026|consen  482 EIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREG  561 (774)
T ss_pred             EechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccC
Confidence            34556677788899999999999984      235689999998754 44788999999999999999999999999999


Q ss_pred             CeeEEEEEccCCCChhHHhhcCC
Q 017984          338 PESLLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       338 ~~~~lv~Ey~~~gsL~~~l~~~~  360 (363)
                      +.++||+|||..|||.+||.-+.
T Consensus       562 ~P~~MvFEYm~~GDL~eFLra~s  584 (774)
T KOG1026|consen  562 DPLCMVFEYMDHGDLHEFLRARS  584 (774)
T ss_pred             CeeEEEEEecccccHHHHHHhhC
Confidence            99999999999999999998544

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.64  E-value=6.8e-16  Score=144.93  Aligned_cols=96  Identities=27%  Similarity=0.371  Sum_probs=85.7

Q ss_pred             HhccCCCcCceecccCceEEEEEEcCCCCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEE
Q 017984          266 KATNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVY  344 (363)
Q Consensus       266 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  344 (363)
                      .+.+.+...++||+|.||+|..+....+..||||.++.. ....+.+|.+|+++|.+++|||||+|+|+|..++.+++|+
T Consensus       535 fPRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~  614 (807)
T KOG1094|consen  535 FPRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMIT  614 (807)
T ss_pred             cchhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHH
Confidence            345556778899999999999999987899999999875 3445688999999999999999999999999999999999


Q ss_pred             EccCCCChhHHhhcCCC
Q 017984          345 EFVPNQSLLDNLFDKML  361 (363)
Q Consensus       345 Ey~~~gsL~~~l~~~~~  361 (363)
                      |||++|+|.+||..+..
T Consensus       615 EYmEnGDLnqFl~ahea  631 (807)
T KOG1094|consen  615 EYMENGDLNQFLSAHEL  631 (807)
T ss_pred             HHHhcCcHHHHHHhccC
Confidence            99999999999988743

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.63  E-value=1.2e-15  Score=140.10  Aligned_cols=90  Identities=33%  Similarity=0.467  Sum_probs=75.2

Q ss_pred             ccCCCcCceecccCceEEEEEEcCCCCEEEEEEeccCChhhHHHHHHHHHHHh--cCCCCCccceeeEEEeCC----eeE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLIS--GINHKNLVKLLGCSITGP----ESL  341 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~--~l~h~niv~l~~~~~~~~----~~~  341 (363)
                      ...+...++||+|+||.||||++. ++.||||++...   ..+.|.+|-.+..  .++|+||+++++.-....    +.+
T Consensus       209 l~pl~l~eli~~Grfg~V~KaqL~-~~~VAVKifp~~---~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eyw  284 (534)
T KOG3653|consen  209 LDPLQLLELIGRGRFGCVWKAQLD-NRLVAVKIFPEQ---EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYW  284 (534)
T ss_pred             CCchhhHHHhhcCccceeehhhcc-CceeEEEecCHH---HHHHHHhHHHHHhccCccchhHHHhhchhccCCcccccee
Confidence            345567788999999999999996 589999999643   4456888888777  458999999999877655    899


Q ss_pred             EEEEccCCCChhHHhhcCCC
Q 017984          342 LVYEFVPNQSLLDNLFDKML  361 (363)
Q Consensus       342 lv~Ey~~~gsL~~~l~~~~~  361 (363)
                      ||+||.++|+|.+||..+..
T Consensus       285 LVt~fh~kGsL~dyL~~nti  304 (534)
T KOG3653|consen  285 LVTEFHPKGSLCDYLKANTI  304 (534)
T ss_pred             EEeeeccCCcHHHHHHhccc
Confidence            99999999999999987653

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.57  E-value=7.3e-15  Score=134.13  Aligned_cols=90  Identities=23%  Similarity=0.386  Sum_probs=75.4

Q ss_pred             ccCCCcCceecccCceEEEEEEcCCCCEEEEEEeccCChhhHHHHHHHHHHHhc--CCCCCccceeeEEEeCC----eeE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISG--INHKNLVKLLGCSITGP----ESL  341 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~----~~~  341 (363)
                      ...+.+.+.||+|.||+||+|.++ |+.||||++...+   ...|.+|.++.+.  |+|+||+.+++.-..++    .+|
T Consensus       210 arqI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~srd---E~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLw  285 (513)
T KOG2052|consen  210 ARQIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSSRD---ERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLW  285 (513)
T ss_pred             hheeEEEEEecCccccceeecccc-CCceEEEEecccc---hhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEE
Confidence            345678889999999999999997 8899999997543   3457888888875  59999999998765543    699


Q ss_pred             EEEEccCCCChhHHhhcCCC
Q 017984          342 LVYEFVPNQSLLDNLFDKML  361 (363)
Q Consensus       342 lv~Ey~~~gsL~~~l~~~~~  361 (363)
                      ||.+|.++|||.+||..+..
T Consensus       286 LvTdYHe~GSL~DyL~r~tv  305 (513)
T KOG2052|consen  286 LVTDYHEHGSLYDYLNRNTV  305 (513)
T ss_pred             EeeecccCCcHHHHHhhccC
Confidence            99999999999999987654

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.56  E-value=5.9e-15  Score=139.67  Aligned_cols=100  Identities=30%  Similarity=0.425  Sum_probs=85.4

Q ss_pred             hHHHHHhccCCCcCceecccCceEEEEEEcC--CC--CE-EEEEEecc---CChhhHHHHHHHHHHHhcCCCCCccceee
Q 017984          261 YETLEKATNYFHESNKLGQGGSGSVYKGTLP--GG--EA-VAVKRLFY---NTTQWVDHFFNEVNLISGINHKNLVKLLG  332 (363)
Q Consensus       261 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~--~g--~~-vavK~l~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~~  332 (363)
                      -..++...++....++||+|.||.||+|.+.  ++  .. ||||..+.   .......+|++|+++|++++|||||+|+|
T Consensus       149 r~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yG  228 (474)
T KOG0194|consen  149 RQKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYG  228 (474)
T ss_pred             ccccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEE
Confidence            3445555666777899999999999999963  23  23 89999985   34666789999999999999999999999


Q ss_pred             EEEeCCeeEEEEEccCCCChhHHhhcCC
Q 017984          333 CSITGPESLLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       333 ~~~~~~~~~lv~Ey~~~gsL~~~l~~~~  360 (363)
                      +.....+++||||+|+||+|.+||.++.
T Consensus       229 Va~~~~Pl~ivmEl~~gGsL~~~L~k~~  256 (474)
T KOG0194|consen  229 VAVLEEPLMLVMELCNGGSLDDYLKKNK  256 (474)
T ss_pred             EEcCCCccEEEEEecCCCcHHHHHHhCC
Confidence            9999999999999999999999999865

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.54  E-value=8.1e-15  Score=136.98  Aligned_cols=88  Identities=31%  Similarity=0.468  Sum_probs=78.6

Q ss_pred             CCCcCceecccCceEEEEEEcCCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEccCC
Q 017984          270 YFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPN  349 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~~~  349 (363)
                      .+...+.||+|.||.||.|.+.....||+|.++.. ....+.|.+|+.+|.+|+|+|||+|+|+|..++.++||||||++
T Consensus       207 ~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~-~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~  285 (468)
T KOG0197|consen  207 ELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEG-SMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPK  285 (468)
T ss_pred             HHHHHHHhcCCccceEEEEEEcCCCcccceEEecc-ccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEeccc
Confidence            34466789999999999999987779999999864 23346799999999999999999999999999999999999999


Q ss_pred             CChhHHhhc
Q 017984          350 QSLLDNLFD  358 (363)
Q Consensus       350 gsL~~~l~~  358 (363)
                      |+|.+||++
T Consensus       286 GsLl~yLr~  294 (468)
T KOG0197|consen  286 GSLLDYLRT  294 (468)
T ss_pred             CcHHHHhhh
Confidence            999999986

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=99.53  E-value=2.4e-14  Score=129.64  Aligned_cols=94  Identities=23%  Similarity=0.338  Sum_probs=79.3

Q ss_pred             hccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCC--h-----hhHHHHHHHHHHHhcCCCCCccceeeEEEeCC
Q 017984          267 ATNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNT--T-----QWVDHFFNEVNLISGINHKNLVKLLGCSITGP  338 (363)
Q Consensus       267 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~--~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~  338 (363)
                      ..+.|...+.||+|+||.|-++.. .+|+.||||++....  .     .......+|+++|.+|+|||||++++++..++
T Consensus       170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d  249 (475)
T KOG0615|consen  170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD  249 (475)
T ss_pred             hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC
Confidence            345577788999999999999985 679999999997531  1     11223579999999999999999999999999


Q ss_pred             eeEEEEEccCCCChhHHhhcCC
Q 017984          339 ESLLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       339 ~~~lv~Ey~~~gsL~~~l~~~~  360 (363)
                      ..|||||||+||+|++.+-.+.
T Consensus       250 s~YmVlE~v~GGeLfd~vv~nk  271 (475)
T KOG0615|consen  250 SSYMVLEYVEGGELFDKVVANK  271 (475)
T ss_pred             ceEEEEEEecCccHHHHHHhcc
Confidence            9999999999999999987654

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=99.53  E-value=2.9e-14  Score=132.68  Aligned_cols=87  Identities=32%  Similarity=0.470  Sum_probs=75.1

Q ss_pred             CcCceecccCceEEEEEEcCCCCEEEEEEeccCC--hhhHHHHHHHHHHHhcCCCCCccceeeEEEeCC-eeEEEEEccC
Q 017984          272 HESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNT--TQWVDHFFNEVNLISGINHKNLVKLLGCSITGP-ESLLVYEFVP  348 (363)
Q Consensus       272 ~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lv~Ey~~  348 (363)
                      ...+.||+|+||.||+|.+.....||||++....  ....++|.+|+.+|.+++|||||+|+|++.++. .+.||||||+
T Consensus        44 ~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~  123 (362)
T KOG0192|consen   44 PIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMP  123 (362)
T ss_pred             hhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCC
Confidence            3445699999999999999744449999997542  222668999999999999999999999999987 7999999999


Q ss_pred             CCChhHHhhc
Q 017984          349 NQSLLDNLFD  358 (363)
Q Consensus       349 ~gsL~~~l~~  358 (363)
                      +|+|.++|++
T Consensus       124 ~GsL~~~l~~  133 (362)
T KOG0192|consen  124 GGSLSVLLHK  133 (362)
T ss_pred             CCcHHHHHhh
Confidence            9999999987

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.52  E-value=1.1e-13  Score=146.66  Aligned_cols=87  Identities=24%  Similarity=0.384  Sum_probs=74.6

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEc
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      ...+...+.||+|+||.||+|.. .++..||||++......    ...|++++++++|||||++++++.+++..++||||
T Consensus       689 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey  764 (968)
T PLN00113        689 LSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI----PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEY  764 (968)
T ss_pred             HhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc----cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeC
Confidence            34577888999999999999996 57899999998654322    23568899999999999999999999999999999


Q ss_pred             cCCCChhHHhhc
Q 017984          347 VPNQSLLDNLFD  358 (363)
Q Consensus       347 ~~~gsL~~~l~~  358 (363)
                      +++|+|.++|++
T Consensus       765 ~~~g~L~~~l~~  776 (968)
T PLN00113        765 IEGKNLSEVLRN  776 (968)
T ss_pred             CCCCcHHHHHhc
Confidence            999999999864

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.51  E-value=2e-14  Score=145.68  Aligned_cols=94  Identities=32%  Similarity=0.468  Sum_probs=82.4

Q ss_pred             ccCCCcCceecccCceEEEEEEcCC--CC----EEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCee
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLPG--GE----AVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPES  340 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~~--g~----~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  340 (363)
                      .+.....+.||+|.||.||+|.+.+  |.    .||||.++.. +.+...+|.+|..+|++++|||||+++|++.+....
T Consensus       691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~  770 (1025)
T KOG1095|consen  691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPP  770 (1025)
T ss_pred             hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCc
Confidence            4556678899999999999999633  33    5899999864 567788899999999999999999999999999999


Q ss_pred             EEEEEccCCCChhHHhhcCCC
Q 017984          341 LLVYEFVPNQSLLDNLFDKML  361 (363)
Q Consensus       341 ~lv~Ey~~~gsL~~~l~~~~~  361 (363)
                      +|++|||++|||..||++.+.
T Consensus       771 ~i~leyM~gGDL~sflr~~r~  791 (1025)
T KOG1095|consen  771 LILLEYMEGGDLLSFLRESRP  791 (1025)
T ss_pred             EEEehhcccCcHHHHHHhccc
Confidence            999999999999999998754

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.50  E-value=8.7e-14  Score=131.85  Aligned_cols=91  Identities=23%  Similarity=0.356  Sum_probs=82.2

Q ss_pred             cCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVY  344 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  344 (363)
                      ..|...+.||+|+|+.+|+++. ..|+.||+|++.+.   ....++...+||++.+.|+|||||+++++|++.+++|||+
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL   97 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL   97 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence            4588899999999999999996 78999999999763   4455677999999999999999999999999999999999


Q ss_pred             EccCCCChhHHhhcC
Q 017984          345 EFVPNQSLLDNLFDK  359 (363)
Q Consensus       345 Ey~~~gsL~~~l~~~  359 (363)
                      |+|++|+|.+++..+
T Consensus        98 ELC~~~sL~el~Krr  112 (592)
T KOG0575|consen   98 ELCHRGSLMELLKRR  112 (592)
T ss_pred             EecCCccHHHHHHhc
Confidence            999999999999843

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.47  E-value=4.2e-14  Score=137.68  Aligned_cols=88  Identities=32%  Similarity=0.516  Sum_probs=76.2

Q ss_pred             CcCceecccCceEEEEEEc-CCCC----EEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEE
Q 017984          272 HESNKLGQGGSGSVYKGTL-PGGE----AVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYE  345 (363)
Q Consensus       272 ~~~~~lg~G~~g~Vy~~~~-~~g~----~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  345 (363)
                      ...++||+|+||+||||.+ +.|+    +||+|++... ..+...+|+.|+-+|.+++||||++|+|+|.... +.||++
T Consensus       699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq  777 (1177)
T KOG1025|consen  699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQ  777 (1177)
T ss_pred             hhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHH
Confidence            4567899999999999986 5544    7899999754 4455678999999999999999999999998766 889999


Q ss_pred             ccCCCChhHHhhcCC
Q 017984          346 FVPNQSLLDNLFDKM  360 (363)
Q Consensus       346 y~~~gsL~~~l~~~~  360 (363)
                      |||.|.|.+|++.++
T Consensus       778 ~mP~G~LlDyvr~hr  792 (1177)
T KOG1025|consen  778 LMPLGCLLDYVREHR  792 (1177)
T ss_pred             hcccchHHHHHHHhh
Confidence            999999999998765

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=99.46  E-value=1.7e-13  Score=128.01  Aligned_cols=96  Identities=22%  Similarity=0.265  Sum_probs=84.9

Q ss_pred             HhccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeE
Q 017984          266 KATNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESL  341 (363)
Q Consensus       266 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  341 (363)
                      ...++|.....||+|+||.||.++- .+|..+|+|+|++.   .....+..+.|-.+|...++|+||+|+..|.+.+++|
T Consensus       138 ~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LY  217 (550)
T KOG0605|consen  138 LSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLY  217 (550)
T ss_pred             CCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeE
Confidence            3567899999999999999999995 46999999999864   3445667899999999999999999999999999999


Q ss_pred             EEEEccCCCChhHHhhcCCC
Q 017984          342 LVYEFVPNQSLLDNLFDKML  361 (363)
Q Consensus       342 lv~Ey~~~gsL~~~l~~~~~  361 (363)
                      |||||+||||+..+|.....
T Consensus       218 LiMEylPGGD~mTLL~~~~~  237 (550)
T KOG0605|consen  218 LIMEYLPGGDMMTLLMRKDT  237 (550)
T ss_pred             EEEEecCCccHHHHHHhcCc
Confidence            99999999999999987654

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.43  E-value=2.2e-13  Score=126.40  Aligned_cols=90  Identities=24%  Similarity=0.438  Sum_probs=75.8

Q ss_pred             cCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeC--CeeEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITG--PESLLV  343 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv  343 (363)
                      +.|...++||+|.||.|||+.. .+|+.||+|+++..  ..+...-..+||.+|++|+||||++|.+.....  ..+|||
T Consensus       117 ~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlV  196 (560)
T KOG0600|consen  117 DSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLV  196 (560)
T ss_pred             HHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEE
Confidence            3455667899999999999994 67999999999864  344455678999999999999999999998876  689999


Q ss_pred             EEccCCCChhHHhhcC
Q 017984          344 YEFVPNQSLLDNLFDK  359 (363)
Q Consensus       344 ~Ey~~~gsL~~~l~~~  359 (363)
                      +|||++ ||.-++...
T Consensus       197 FeYMdh-DL~GLl~~p  211 (560)
T KOG0600|consen  197 FEYMDH-DLSGLLSSP  211 (560)
T ss_pred             Eecccc-hhhhhhcCC
Confidence            999987 888877654

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=99.41  E-value=3.7e-13  Score=120.68  Aligned_cols=94  Identities=26%  Similarity=0.287  Sum_probs=83.1

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLV  343 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  343 (363)
                      .++|...++||+|+||.||.++. ++++.+|+|++++.   .....+...+|..+|.+++||.||+|+-.|.+.+.+|||
T Consensus        24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV  103 (357)
T KOG0598|consen   24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV  103 (357)
T ss_pred             hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence            46788999999999999999986 45899999999764   334456789999999999999999999999999999999


Q ss_pred             EEccCCCChhHHhhcCCC
Q 017984          344 YEFVPNQSLLDNLFDKML  361 (363)
Q Consensus       344 ~Ey~~~gsL~~~l~~~~~  361 (363)
                      +||++||+|..+|.++..
T Consensus       104 ld~~~GGeLf~hL~~eg~  121 (357)
T KOG0598|consen  104 LDYLNGGELFYHLQREGR  121 (357)
T ss_pred             EeccCCccHHHHHHhcCC
Confidence            999999999999986654

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.41  E-value=1.2e-13  Score=130.96  Aligned_cols=97  Identities=34%  Similarity=0.470  Sum_probs=85.4

Q ss_pred             HHHHHhccCCCcCceecccCceEEEEEEcCC-CCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCee
Q 017984          262 ETLEKATNYFHESNKLGQGGSGSVYKGTLPG-GEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPES  340 (363)
Q Consensus       262 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~-g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  340 (363)
                      +.++-.+.++...++||-|.||.||.|.|+. ...||||.++.. ....++|+.|..+|+.++|||+|+|+|+|..+...
T Consensus       260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKED-tMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPF  338 (1157)
T KOG4278|consen  260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPF  338 (1157)
T ss_pred             chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhc-chhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCe
Confidence            4555556667788899999999999999854 668999999754 45678999999999999999999999999999999


Q ss_pred             EEEEEccCCCChhHHhhcC
Q 017984          341 LLVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       341 ~lv~Ey~~~gsL~~~l~~~  359 (363)
                      |||+|||.+|+|.+||++-
T Consensus       339 YIiTEfM~yGNLLdYLRec  357 (1157)
T KOG4278|consen  339 YIITEFMCYGNLLDYLREC  357 (1157)
T ss_pred             EEEEecccCccHHHHHHHh
Confidence            9999999999999999853

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=99.41  E-value=3.9e-13  Score=115.50  Aligned_cols=91  Identities=27%  Similarity=0.452  Sum_probs=78.6

Q ss_pred             CCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCCh--hhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEc
Q 017984          270 YFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTT--QWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      .|...++||+|.||.||++.. .+|+.||||+++....  .-.....+||..|+.++|+||+.|++++...+.+-||+||
T Consensus         3 rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEf   82 (318)
T KOG0659|consen    3 RYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEF   82 (318)
T ss_pred             hhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEe
Confidence            466678899999999999995 6799999999986422  2234578999999999999999999999999999999999


Q ss_pred             cCCCChhHHhhcCCC
Q 017984          347 VPNQSLLDNLFDKML  361 (363)
Q Consensus       347 ~~~gsL~~~l~~~~~  361 (363)
                      |+. ||+..|+++..
T Consensus        83 m~t-dLe~vIkd~~i   96 (318)
T KOG0659|consen   83 MPT-DLEVVIKDKNI   96 (318)
T ss_pred             ccc-cHHHHhccccc
Confidence            987 99999988754

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.40  E-value=1.6e-13  Score=116.13  Aligned_cols=93  Identities=27%  Similarity=0.381  Sum_probs=81.4

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLV  343 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  343 (363)
                      .++|..+++||+|.||.||.+.. +++-.||+|++.+.   ..+..+++.+|+++-..|+||||+++++++.+....||+
T Consensus        21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLi  100 (281)
T KOG0580|consen   21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLI  100 (281)
T ss_pred             hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEE
Confidence            46788999999999999999996 45779999999754   233356799999999999999999999999999999999


Q ss_pred             EEccCCCChhHHhhcCC
Q 017984          344 YEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       344 ~Ey~~~gsL~~~l~~~~  360 (363)
                      +||.++|+|...|.+.+
T Consensus       101 lEya~~gel~k~L~~~~  117 (281)
T KOG0580|consen  101 LEYAPRGELYKDLQEGR  117 (281)
T ss_pred             EEecCCchHHHHHHhcc
Confidence            99999999999998443

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.40  E-value=2.2e-13  Score=127.93  Aligned_cols=93  Identities=24%  Similarity=0.329  Sum_probs=81.2

Q ss_pred             cCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYE  345 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  345 (363)
                      ++|...+.||+|+||.||||+.+ +.+.||+|.+.+.  .....+.+.+|++++++++|||||.++++|++..++|+|+|
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte   81 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE   81 (808)
T ss_pred             cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence            46778889999999999999964 5789999999764  34456779999999999999999999999999999999999


Q ss_pred             ccCCCChhHHhhcCCCC
Q 017984          346 FVPNQSLLDNLFDKMLS  362 (363)
Q Consensus       346 y~~~gsL~~~l~~~~~~  362 (363)
                      |+.| +|+.+|.+....
T Consensus        82 ~a~g-~L~~il~~d~~l   97 (808)
T KOG0597|consen   82 YAVG-DLFTILEQDGKL   97 (808)
T ss_pred             hhhh-hHHHHHHhccCC
Confidence            9977 999999876544

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=99.38  E-value=1.7e-12  Score=116.57  Aligned_cols=88  Identities=24%  Similarity=0.380  Sum_probs=77.9

Q ss_pred             CCcCceecccCceEEEEEEc-CCCCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCC-eeEEEEEcc
Q 017984          271 FHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGP-ESLLVYEFV  347 (363)
Q Consensus       271 ~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lv~Ey~  347 (363)
                      +...+.||+|..|.|||+.+ ++++.+|+|.+... +....+++.+|++++.+.+||+||+++|+|..+. .+.|+||||
T Consensus        81 le~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYM  160 (364)
T KOG0581|consen   81 LERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYM  160 (364)
T ss_pred             hhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhc
Confidence            34567899999999999997 46889999999643 5566778999999999999999999999999988 599999999


Q ss_pred             CCCChhHHhhc
Q 017984          348 PNQSLLDNLFD  358 (363)
Q Consensus       348 ~~gsL~~~l~~  358 (363)
                      .+|||++++..
T Consensus       161 DgGSLd~~~k~  171 (364)
T KOG0581|consen  161 DGGSLDDILKR  171 (364)
T ss_pred             CCCCHHHHHhh
Confidence            99999998874

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.38  E-value=1.1e-12  Score=125.14  Aligned_cols=96  Identities=24%  Similarity=0.296  Sum_probs=81.3

Q ss_pred             HHHhccCCCcCceecccCceEEEEEEcC------CCCEEEEEEeccC-ChhhHHHHHHHHHHHhcCC-CCCccceeeEEE
Q 017984          264 LEKATNYFHESNKLGQGGSGSVYKGTLP------GGEAVAVKRLFYN-TTQWVDHFFNEVNLISGIN-HKNLVKLLGCSI  335 (363)
Q Consensus       264 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~  335 (363)
                      +....+.|...++||+|+||.||+|...      .+..||||++... .....+.|.+|+.++.++. ||||+++++++.
T Consensus        32 ~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~  111 (400)
T cd05105          32 WEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACT  111 (400)
T ss_pred             eeccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEc
Confidence            3445678889999999999999999842      1347999999754 3344567999999999996 999999999999


Q ss_pred             eCCeeEEEEEccCCCChhHHhhcC
Q 017984          336 TGPESLLVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       336 ~~~~~~lv~Ey~~~gsL~~~l~~~  359 (363)
                      ....++|||||+++|+|.++|+.+
T Consensus       112 ~~~~~~lv~Ey~~~g~L~~~l~~~  135 (400)
T cd05105         112 KSGPIYIITEYCFYGDLVNYLHKN  135 (400)
T ss_pred             cCCceEEEEEecCCCcHHHHHHHh
Confidence            999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.37  E-value=2.8e-12  Score=121.76  Aligned_cols=91  Identities=20%  Similarity=0.248  Sum_probs=79.5

Q ss_pred             CCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEE
Q 017984          270 YFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYE  345 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  345 (363)
                      .|...+.||+|+||.||++.. .+++.+|+|++...   .......+.+|+.++.+++||||+++++++.+.+.++||||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E   81 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD   81 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence            477888999999999999986 56889999999753   23345679999999999999999999999999999999999


Q ss_pred             ccCCCChhHHhhcCC
Q 017984          346 FVPNQSLLDNLFDKM  360 (363)
Q Consensus       346 y~~~gsL~~~l~~~~  360 (363)
                      |+++|+|.++|....
T Consensus        82 ~~~gg~L~~~l~~~~   96 (381)
T cd05626          82 YIPGGDMMSLLIRME   96 (381)
T ss_pred             cCCCCcHHHHHHhcC
Confidence            999999999987644

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=99.36  E-value=5.9e-13  Score=116.38  Aligned_cols=87  Identities=24%  Similarity=0.387  Sum_probs=72.1

Q ss_pred             CCCcCceecccCceEEEEEEcC-CCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEc
Q 017984          270 YFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      .|....++|+|+||.|||++.+ +|+.||||++...  ++.-.+-.++||++|++++|+|+|.|+.+|.....++||+||
T Consensus         3 kYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~   82 (396)
T KOG0593|consen    3 KYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEY   82 (396)
T ss_pred             HHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeee
Confidence            4566778999999999999975 5999999999754  233344578999999999999999999999999999999999


Q ss_pred             cCCCChhHHhh
Q 017984          347 VPNQSLLDNLF  357 (363)
Q Consensus       347 ~~~gsL~~~l~  357 (363)
                      ++.- +.+-|.
T Consensus        83 ~dhT-vL~eLe   92 (396)
T KOG0593|consen   83 CDHT-VLHELE   92 (396)
T ss_pred             cchH-HHHHHH
Confidence            9874 434343

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.36  E-value=4.8e-14  Score=121.94  Aligned_cols=89  Identities=26%  Similarity=0.404  Sum_probs=76.5

Q ss_pred             cCCCcCceecccCceEEEEEE-cCCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceee-EEEeCCe-eEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGT-LPGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLG-CSITGPE-SLLV  343 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~-~~~~~~~-~~lv  343 (363)
                      .+|...++||+|+||+|||+. +.+|..+|.|.+.-.  +.+.++....|+.+|++|+|||||++++ .+.++++ ++||
T Consensus        19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv   98 (375)
T KOG0591|consen   19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV   98 (375)
T ss_pred             HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence            346678899999999999998 578999999999743  5566778999999999999999999998 4455555 8999


Q ss_pred             EEccCCCChhHHhh
Q 017984          344 YEFVPNQSLLDNLF  357 (363)
Q Consensus       344 ~Ey~~~gsL~~~l~  357 (363)
                      |||+.+|||.+.|.
T Consensus        99 mE~c~~GDLsqmIk  112 (375)
T KOG0591|consen   99 MELCDAGDLSQMIK  112 (375)
T ss_pred             HHhhcccCHHHHHH
Confidence            99999999999886

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.35  E-value=3.8e-12  Score=120.66  Aligned_cols=92  Identities=22%  Similarity=0.278  Sum_probs=79.6

Q ss_pred             cCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVY  344 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  344 (363)
                      ++|...+.||+|+||.||++.. .+++.||||++...   .....+.+.+|++++.+++||||+++++++.+....+|||
T Consensus         1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~   80 (377)
T cd05629           1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM   80 (377)
T ss_pred             CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence            3678889999999999999985 56889999998643   2334567899999999999999999999999999999999


Q ss_pred             EccCCCChhHHhhcCC
Q 017984          345 EFVPNQSLLDNLFDKM  360 (363)
Q Consensus       345 Ey~~~gsL~~~l~~~~  360 (363)
                      ||+++|+|.++|....
T Consensus        81 E~~~gg~L~~~l~~~~   96 (377)
T cd05629          81 EFLPGGDLMTMLIKYD   96 (377)
T ss_pred             eCCCCCcHHHHHHhcC
Confidence            9999999999987543

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.35  E-value=3.1e-12  Score=115.17  Aligned_cols=92  Identities=24%  Similarity=0.341  Sum_probs=79.2

Q ss_pred             ccCCCcCceecccCceEEEEEEcC----CCCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLP----GGEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLL  342 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~----~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  342 (363)
                      .++|...+.||+|+||.||++.+.    .+..||+|.++.. .......|.+|+.++.+++||||+++++++..++..+|
T Consensus         4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l   83 (266)
T cd05064           4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMI   83 (266)
T ss_pred             hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEE
Confidence            345778899999999999999852    3568999999764 33445679999999999999999999999999999999


Q ss_pred             EEEccCCCChhHHhhcC
Q 017984          343 VYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       343 v~Ey~~~gsL~~~l~~~  359 (363)
                      ||||+++|+|.+++..+
T Consensus        84 v~e~~~~~~L~~~l~~~  100 (266)
T cd05064          84 VTEYMSNGALDSFLRKH  100 (266)
T ss_pred             EEEeCCCCcHHHHHHhC
Confidence            99999999999998764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.35  E-value=1.5e-12  Score=123.39  Aligned_cols=94  Identities=30%  Similarity=0.369  Sum_probs=80.0

Q ss_pred             HhccCCCcCceecccCceEEEEEEc------CCCCEEEEEEeccC-ChhhHHHHHHHHHHHhcC-CCCCccceeeEEEeC
Q 017984          266 KATNYFHESNKLGQGGSGSVYKGTL------PGGEAVAVKRLFYN-TTQWVDHFFNEVNLISGI-NHKNLVKLLGCSITG  337 (363)
Q Consensus       266 ~~~~~~~~~~~lg~G~~g~Vy~~~~------~~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~  337 (363)
                      ...++|...+.||+|+||.||++..      .++..||||+++.. .....+.+.+|+.++..+ +||||+++++++...
T Consensus        32 ~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~  111 (375)
T cd05104          32 FPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVG  111 (375)
T ss_pred             cchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccC
Confidence            3455788899999999999999973      23568999999753 233456789999999999 899999999999999


Q ss_pred             CeeEEEEEccCCCChhHHhhcC
Q 017984          338 PESLLVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       338 ~~~~lv~Ey~~~gsL~~~l~~~  359 (363)
                      +..++||||+++|+|.++|...
T Consensus       112 ~~~~lv~E~~~~g~L~~~l~~~  133 (375)
T cd05104         112 GPTLVITEYCCYGDLLNFLRRK  133 (375)
T ss_pred             CcceeeehhccCCcHHHHHHhc
Confidence            9999999999999999999764

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.34  E-value=6.9e-12  Score=116.88  Aligned_cols=93  Identities=20%  Similarity=0.275  Sum_probs=81.5

Q ss_pred             ccCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYE  345 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  345 (363)
                      .++|...+.||+|+||.||++... ++..+|+|.+... .......+.+|++++.+++||||+++++++...+..+||||
T Consensus         4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   83 (333)
T cd06650           4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   83 (333)
T ss_pred             hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence            467888999999999999999964 5888999988754 33445679999999999999999999999999999999999


Q ss_pred             ccCCCChhHHhhcCC
Q 017984          346 FVPNQSLLDNLFDKM  360 (363)
Q Consensus       346 y~~~gsL~~~l~~~~  360 (363)
                      |+++|+|.++|....
T Consensus        84 ~~~~~~L~~~l~~~~   98 (333)
T cd06650          84 HMDGGSLDQVLKKAG   98 (333)
T ss_pred             cCCCCcHHHHHHHcC
Confidence            999999999987543

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.34  E-value=3.4e-12  Score=120.34  Aligned_cols=92  Identities=22%  Similarity=0.281  Sum_probs=80.0

Q ss_pred             cCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVY  344 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  344 (363)
                      ++|...+.||+|+||.||++.. .+++.||||++...   .......+.+|+.++..++||||+++++++..++..+|||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~   80 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM   80 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence            3678889999999999999996 46889999999743   2334456889999999999999999999999999999999


Q ss_pred             EccCCCChhHHhhcCC
Q 017984          345 EFVPNQSLLDNLFDKM  360 (363)
Q Consensus       345 Ey~~~gsL~~~l~~~~  360 (363)
                      ||+++|+|.++|..+.
T Consensus        81 E~~~~g~L~~~l~~~~   96 (364)
T cd05599          81 EYLPGGDMMTLLMKKD   96 (364)
T ss_pred             CCCCCcHHHHHHHHcC
Confidence            9999999999987643

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.34  E-value=5.8e-12  Score=115.70  Aligned_cols=92  Identities=25%  Similarity=0.331  Sum_probs=78.3

Q ss_pred             ccCCCcCceecccCceEEEEEEcCC-----------------CCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccc
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLPG-----------------GEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVK  329 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~~-----------------g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~  329 (363)
                      .++|...++||+|+||.||++.+.+                 +..||+|.+... ......+|.+|+.++.+++||||++
T Consensus         4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~   83 (304)
T cd05096           4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIR   83 (304)
T ss_pred             hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeE
Confidence            3567788999999999999997532                 347999999764 3444567999999999999999999


Q ss_pred             eeeEEEeCCeeEEEEEccCCCChhHHhhcC
Q 017984          330 LLGCSITGPESLLVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       330 l~~~~~~~~~~~lv~Ey~~~gsL~~~l~~~  359 (363)
                      +++++...+..+|||||+++|+|.++|...
T Consensus        84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  113 (304)
T cd05096          84 LLGVCVDEDPLCMITEYMENGDLNQFLSSH  113 (304)
T ss_pred             EEEEEecCCceEEEEecCCCCcHHHHHHhc
Confidence            999999999999999999999999998653

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.33  E-value=5.1e-12  Score=117.59  Aligned_cols=92  Identities=23%  Similarity=0.285  Sum_probs=80.0

Q ss_pred             cCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVY  344 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  344 (363)
                      ++|...+.||+|+||.||++... +++.||+|++...   .....+.+.+|+.++.+++||||+++++++..++..++||
T Consensus        18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   97 (329)
T PTZ00263         18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL   97 (329)
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence            56778899999999999999974 5889999999643   2233567899999999999999999999999999999999


Q ss_pred             EccCCCChhHHhhcCC
Q 017984          345 EFVPNQSLLDNLFDKM  360 (363)
Q Consensus       345 Ey~~~gsL~~~l~~~~  360 (363)
                      ||+++|+|.++|.+..
T Consensus        98 e~~~~~~L~~~l~~~~  113 (329)
T PTZ00263         98 EFVVGGELFTHLRKAG  113 (329)
T ss_pred             cCCCCChHHHHHHHcC
Confidence            9999999999987653

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.33  E-value=3.8e-12  Score=116.29  Aligned_cols=92  Identities=17%  Similarity=0.210  Sum_probs=79.5

Q ss_pred             cCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVY  344 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  344 (363)
                      ++|...+.||+|+||.||++... +++.||+|++...   .....+.+.+|+.++.+++||||+++++.+.+.+..++||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   80 (291)
T cd05612           1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM   80 (291)
T ss_pred             CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence            36778899999999999999964 6889999999643   2234556899999999999999999999999999999999


Q ss_pred             EccCCCChhHHhhcCC
Q 017984          345 EFVPNQSLLDNLFDKM  360 (363)
Q Consensus       345 Ey~~~gsL~~~l~~~~  360 (363)
                      ||+++|+|.+++..+.
T Consensus        81 e~~~~~~L~~~~~~~~   96 (291)
T cd05612          81 EYVPGGELFSYLRNSG   96 (291)
T ss_pred             eCCCCCCHHHHHHHcC
Confidence            9999999999987643

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.33  E-value=9.7e-12  Score=115.77  Aligned_cols=93  Identities=20%  Similarity=0.257  Sum_probs=81.5

Q ss_pred             ccCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYE  345 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  345 (363)
                      .++|...+.||+|+||.||++... ++..+|+|.+... .......|.+|++++.+++||||+++++++..++..++|||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   83 (331)
T cd06649           4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   83 (331)
T ss_pred             cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence            367888999999999999999964 5889999998754 33445679999999999999999999999999999999999


Q ss_pred             ccCCCChhHHhhcCC
Q 017984          346 FVPNQSLLDNLFDKM  360 (363)
Q Consensus       346 y~~~gsL~~~l~~~~  360 (363)
                      |+++|+|.+++....
T Consensus        84 ~~~~~~L~~~l~~~~   98 (331)
T cd06649          84 HMDGGSLDQVLKEAK   98 (331)
T ss_pred             cCCCCcHHHHHHHcC
Confidence            999999999987643

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.33  E-value=7.1e-12  Score=119.04  Aligned_cols=91  Identities=19%  Similarity=0.236  Sum_probs=79.3

Q ss_pred             CCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEE
Q 017984          270 YFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYE  345 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  345 (363)
                      .|...+.||+|+||.||++.. .+++.+|+|++...   .......+.+|+.++++++||||+++++.+...+.++||||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E   81 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD   81 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence            477888999999999999986 46889999999643   22345678999999999999999999999999999999999


Q ss_pred             ccCCCChhHHhhcCC
Q 017984          346 FVPNQSLLDNLFDKM  360 (363)
Q Consensus       346 y~~~gsL~~~l~~~~  360 (363)
                      |+++|+|.++|.+..
T Consensus        82 ~~~gg~L~~~l~~~~   96 (382)
T cd05625          82 YIPGGDMMSLLIRMG   96 (382)
T ss_pred             CCCCCcHHHHHHhcC
Confidence            999999999987643

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=99.33  E-value=8.2e-13  Score=119.61  Aligned_cols=91  Identities=21%  Similarity=0.353  Sum_probs=80.2

Q ss_pred             CCcCceecccCceEEEEEEc-CCCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEc
Q 017984          271 FHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       271 ~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      |...+.||+|.||.|-++.. ..|+.||||.|++.   +.+..-.+.+||++|..|+||||+.++.+|+..+.+.|||||
T Consensus        55 yE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivMEY  134 (668)
T KOG0611|consen   55 YEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVMEY  134 (668)
T ss_pred             HHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEEEe
Confidence            55666899999999999985 56999999999764   555566789999999999999999999999999999999999


Q ss_pred             cCCCChhHHhhcCCC
Q 017984          347 VPNQSLLDNLFDKML  361 (363)
Q Consensus       347 ~~~gsL~~~l~~~~~  361 (363)
                      ..+|+|.+||.+...
T Consensus       135 aS~GeLYDYiSer~~  149 (668)
T KOG0611|consen  135 ASGGELYDYISERGS  149 (668)
T ss_pred             cCCccHHHHHHHhcc
Confidence            999999999986543

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.32  E-value=7.6e-12  Score=116.54  Aligned_cols=92  Identities=28%  Similarity=0.350  Sum_probs=79.8

Q ss_pred             cCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVY  344 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  344 (363)
                      ++|...+.||+|+||.||++... +++.||+|+++..   .......+.+|+.++..++||||+++++++...+..+|||
T Consensus         1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~   80 (333)
T cd05600           1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM   80 (333)
T ss_pred             CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence            35788899999999999999974 5889999999743   2234567899999999999999999999999999999999


Q ss_pred             EccCCCChhHHhhcCC
Q 017984          345 EFVPNQSLLDNLFDKM  360 (363)
Q Consensus       345 Ey~~~gsL~~~l~~~~  360 (363)
                      ||+++|+|.+++....
T Consensus        81 e~~~g~~L~~~l~~~~   96 (333)
T cd05600          81 EYVPGGDFRTLLNNLG   96 (333)
T ss_pred             eCCCCCCHHHHHHHcC
Confidence            9999999999997543

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.32  E-value=7.5e-12  Score=118.60  Aligned_cols=91  Identities=18%  Similarity=0.209  Sum_probs=79.2

Q ss_pred             CCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEE
Q 017984          270 YFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYE  345 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  345 (363)
                      +|...+.||+|+||.||++.. .+++.||+|++...   .......+.+|+.++.+++||||+++++.+..++.++||||
T Consensus         2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E   81 (376)
T cd05598           2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD   81 (376)
T ss_pred             CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEe
Confidence            578889999999999999986 45889999999643   22334568899999999999999999999999999999999


Q ss_pred             ccCCCChhHHhhcCC
Q 017984          346 FVPNQSLLDNLFDKM  360 (363)
Q Consensus       346 y~~~gsL~~~l~~~~  360 (363)
                      |+++|+|.++|.+..
T Consensus        82 ~~~~g~L~~~i~~~~   96 (376)
T cd05598          82 YIPGGDMMSLLIRLG   96 (376)
T ss_pred             CCCCCcHHHHHHhcC
Confidence            999999999987654

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.32  E-value=2.4e-12  Score=120.16  Aligned_cols=94  Identities=26%  Similarity=0.324  Sum_probs=77.8

Q ss_pred             HhccCCCcCceecccCceEEEEEEc------CCCCEEEEEEeccCC-hhhHHHHHHHHHHHhcC-CCCCccceeeEEEeC
Q 017984          266 KATNYFHESNKLGQGGSGSVYKGTL------PGGEAVAVKRLFYNT-TQWVDHFFNEVNLISGI-NHKNLVKLLGCSITG  337 (363)
Q Consensus       266 ~~~~~~~~~~~lg~G~~g~Vy~~~~------~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~  337 (363)
                      .+.++|...++||+|+||.||++..      .+++.||||+++... ......+.+|+.++..+ +||||+++++++...
T Consensus         4 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~   83 (338)
T cd05102           4 FPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKP   83 (338)
T ss_pred             cchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCC
Confidence            3456788899999999999999973      235689999997542 33456799999999999 899999999988764


Q ss_pred             -CeeEEEEEccCCCChhHHhhcC
Q 017984          338 -PESLLVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       338 -~~~~lv~Ey~~~gsL~~~l~~~  359 (363)
                       ...++||||+++|+|.++|...
T Consensus        84 ~~~~~lv~ey~~~g~L~~~l~~~  106 (338)
T cd05102          84 NGPLMVIVEFCKYGNLSNFLRAK  106 (338)
T ss_pred             CCceEEEEecCCCCcHHHHHHhc
Confidence             4689999999999999999754

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.32  E-value=3.4e-12  Score=121.72  Aligned_cols=97  Identities=26%  Similarity=0.354  Sum_probs=81.3

Q ss_pred             HHHhccCCCcCceecccCceEEEEEEcC------CCCEEEEEEeccC-ChhhHHHHHHHHHHHhcCC-CCCccceeeEEE
Q 017984          264 LEKATNYFHESNKLGQGGSGSVYKGTLP------GGEAVAVKRLFYN-TTQWVDHFFNEVNLISGIN-HKNLVKLLGCSI  335 (363)
Q Consensus       264 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~  335 (363)
                      +..+.+++...+.||+|+||.||++.++      .++.||+|+++.. .....+.+.+|+.+|.++. ||||+++++++.
T Consensus        32 ~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~  111 (401)
T cd05107          32 WEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACT  111 (401)
T ss_pred             ceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEc
Confidence            4445566778899999999999999853      2458999999754 2333457999999999997 999999999999


Q ss_pred             eCCeeEEEEEccCCCChhHHhhcCC
Q 017984          336 TGPESLLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       336 ~~~~~~lv~Ey~~~gsL~~~l~~~~  360 (363)
                      ..+..++||||+++|+|.++|+.+.
T Consensus       112 ~~~~~~iv~E~~~~g~L~~~l~~~~  136 (401)
T cd05107         112 KGGPIYIITEYCRYGDLVDYLHRNK  136 (401)
T ss_pred             cCCCcEEEEeccCCCcHHHHHHhcc
Confidence            9999999999999999999998653

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.31  E-value=9.6e-12  Score=111.99  Aligned_cols=96  Identities=27%  Similarity=0.308  Sum_probs=84.6

Q ss_pred             HHHhccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEE
Q 017984          264 LEKATNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLL  342 (363)
Q Consensus       264 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  342 (363)
                      ++.+++++.....||+|+||.||++.. .++..|++|.+........+.+.+|+.++..++|+||+++++++..++..++
T Consensus         3 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l   82 (268)
T cd06624           3 YEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKI   82 (268)
T ss_pred             cccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEE
Confidence            445677777788999999999999995 4578899999887666666789999999999999999999999999999999


Q ss_pred             EEEccCCCChhHHhhcC
Q 017984          343 VYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       343 v~Ey~~~gsL~~~l~~~  359 (363)
                      |+||+++++|.+++...
T Consensus        83 v~e~~~~~~L~~~l~~~   99 (268)
T cd06624          83 FMEQVPGGSLSALLRSK   99 (268)
T ss_pred             EEecCCCCCHHHHHHHh
Confidence            99999999999998754

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>PHA02988 hypothetical protein; Provisional

Probab=99.31  E-value=1.1e-11  Score=112.93  Aligned_cols=86  Identities=22%  Similarity=0.317  Sum_probs=73.5

Q ss_pred             CceecccCceEEEEEEcCCCCEEEEEEeccCCh---hhHHHHHHHHHHHhcCCCCCccceeeEEEe----CCeeEEEEEc
Q 017984          274 SNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTT---QWVDHFFNEVNLISGINHKNLVKLLGCSIT----GPESLLVYEF  346 (363)
Q Consensus       274 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lv~Ey  346 (363)
                      ...|++|+++.||+|.+ +|+.||||.++....   ...+.|.+|+.+|.+++||||+++++++.+    ....+|||||
T Consensus        25 ~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey  103 (283)
T PHA02988         25 SVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEY  103 (283)
T ss_pred             CeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEe
Confidence            36799999999999998 588999999975422   225678899999999999999999999877    3578999999


Q ss_pred             cCCCChhHHhhcCC
Q 017984          347 VPNQSLLDNLFDKM  360 (363)
Q Consensus       347 ~~~gsL~~~l~~~~  360 (363)
                      +++|+|.++|.++.
T Consensus       104 ~~~g~L~~~l~~~~  117 (283)
T PHA02988        104 CTRGYLREVLDKEK  117 (283)
T ss_pred             CCCCcHHHHHhhCC
Confidence            99999999997654

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.31  E-value=9.9e-12  Score=117.24  Aligned_cols=92  Identities=22%  Similarity=0.259  Sum_probs=79.7

Q ss_pred             cCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVY  344 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  344 (363)
                      ++|...+.||+|+||.||++.. .+++.+|+|++...   .......+.+|+.++.+++||||+++++.+.+...++|||
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~   80 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM   80 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence            4678889999999999999986 45889999999743   2233456889999999999999999999999999999999


Q ss_pred             EccCCCChhHHhhcCC
Q 017984          345 EFVPNQSLLDNLFDKM  360 (363)
Q Consensus       345 Ey~~~gsL~~~l~~~~  360 (363)
                      ||+++|+|.++|..+.
T Consensus        81 E~~~gg~L~~~l~~~~   96 (363)
T cd05628          81 EFLPGGDMMTLLMKKD   96 (363)
T ss_pred             cCCCCCcHHHHHHhcC
Confidence            9999999999987643

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.30  E-value=1e-11  Score=116.05  Aligned_cols=93  Identities=30%  Similarity=0.326  Sum_probs=79.1

Q ss_pred             ccCCCcCceecccCceEEEEEEcCC--CCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLPG--GEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLL  342 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~~--g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  342 (363)
                      .++|...+.||+|+||.||++....  +..||+|++...   .....+.+.+|+.++..++||||+++++++..++..+|
T Consensus        29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l  108 (340)
T PTZ00426         29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYL  108 (340)
T ss_pred             hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEE
Confidence            3457788999999999999998533  368999998642   23345678999999999999999999999999999999


Q ss_pred             EEEccCCCChhHHhhcCC
Q 017984          343 VYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       343 v~Ey~~~gsL~~~l~~~~  360 (363)
                      ||||+++|+|.++|..+.
T Consensus       109 v~Ey~~~g~L~~~i~~~~  126 (340)
T PTZ00426        109 VLEFVIGGEFFTFLRRNK  126 (340)
T ss_pred             EEeCCCCCcHHHHHHHcC
Confidence            999999999999997654

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.30  E-value=1.9e-11  Score=112.65  Aligned_cols=92  Identities=22%  Similarity=0.269  Sum_probs=79.9

Q ss_pred             cCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEc
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      ++|...+.||+|+||.||++.. .++..+|+|.+... ......++.+|++++.+++||||+++++++..++..+|||||
T Consensus         1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey   80 (308)
T cd06615           1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH   80 (308)
T ss_pred             CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence            3578889999999999999986 45788999998754 333456789999999999999999999999999999999999


Q ss_pred             cCCCChhHHhhcCC
Q 017984          347 VPNQSLLDNLFDKM  360 (363)
Q Consensus       347 ~~~gsL~~~l~~~~  360 (363)
                      +++++|.+++....
T Consensus        81 ~~~~~L~~~l~~~~   94 (308)
T cd06615          81 MDGGSLDQVLKKAG   94 (308)
T ss_pred             cCCCcHHHHHHhcC
Confidence            99999999987543

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.29  E-value=5.4e-12  Score=113.26  Aligned_cols=87  Identities=33%  Similarity=0.516  Sum_probs=73.6

Q ss_pred             cCceecccCceEEEEEEcC-----CCCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEc
Q 017984          273 ESNKLGQGGSGSVYKGTLP-----GGEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       273 ~~~~lg~G~~g~Vy~~~~~-----~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      ..+.||.|.||.||+|.+.     .+..|+||.++.. .....+.|.+|++.+.+++||||++++|++...+..++|+||
T Consensus         3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~   82 (259)
T PF07714_consen    3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY   82 (259)
T ss_dssp             EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred             EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence            4578999999999999975     2568999999653 344578899999999999999999999999988889999999


Q ss_pred             cCCCChhHHhhcC
Q 017984          347 VPNQSLLDNLFDK  359 (363)
Q Consensus       347 ~~~gsL~~~l~~~  359 (363)
                      +++|+|.++|...
T Consensus        83 ~~~g~L~~~L~~~   95 (259)
T PF07714_consen   83 CPGGSLDDYLKSK   95 (259)
T ss_dssp             -TTEBHHHHHHHT
T ss_pred             ccccccccccccc
Confidence            9999999999876

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.29  E-value=2.4e-11  Score=109.29  Aligned_cols=92  Identities=22%  Similarity=0.299  Sum_probs=80.7

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEc
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      .++|...+.||+|+||.||++.. .+++.+|+|++..........+.+|+.++.+++||||+++++.+..++..++||||
T Consensus         8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~   87 (267)
T cd06646           8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEY   87 (267)
T ss_pred             hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeC
Confidence            35688889999999999999996 56889999999765444456788999999999999999999999999999999999


Q ss_pred             cCCCChhHHhhcC
Q 017984          347 VPNQSLLDNLFDK  359 (363)
Q Consensus       347 ~~~gsL~~~l~~~  359 (363)
                      +++++|.+++..+
T Consensus        88 ~~~~~L~~~~~~~  100 (267)
T cd06646          88 CGGGSLQDIYHVT  100 (267)
T ss_pred             CCCCcHHHHHHhc
Confidence            9999999988654

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.28  E-value=1.1e-11  Score=110.78  Aligned_cols=90  Identities=26%  Similarity=0.352  Sum_probs=78.3

Q ss_pred             cCCCcCceecccCceEEEEEEcCCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEccC
Q 017984          269 NYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVP  348 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~~  348 (363)
                      ++|...+.||+|+||.||++.+.++..+|+|.+.... ...+.|.+|+.++++++||||+++++++...+..++||||++
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~   82 (256)
T cd05114           4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME   82 (256)
T ss_pred             HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence            3466778899999999999998777889999886432 234578999999999999999999999999999999999999


Q ss_pred             CCChhHHhhcC
Q 017984          349 NQSLLDNLFDK  359 (363)
Q Consensus       349 ~gsL~~~l~~~  359 (363)
                      +|+|.+++...
T Consensus        83 ~~~L~~~~~~~   93 (256)
T cd05114          83 NGCLLNYLRQR   93 (256)
T ss_pred             CCcHHHHHHhC
Confidence            99999998753

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.28  E-value=5.8e-12  Score=112.81  Aligned_cols=93  Identities=27%  Similarity=0.355  Sum_probs=83.3

Q ss_pred             hccCCCcCceecccCceEEEEEEcCCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEc
Q 017984          267 ATNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       267 ~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      +..+|...+.||+|+||.||++...++..+++|.+..........+.+|+.++..++||||+++++++...+..++||||
T Consensus         4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   83 (261)
T cd05148           4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITEL   83 (261)
T ss_pred             cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEee
Confidence            34567888999999999999999877899999999876555567799999999999999999999999999999999999


Q ss_pred             cCCCChhHHhhcC
Q 017984          347 VPNQSLLDNLFDK  359 (363)
Q Consensus       347 ~~~gsL~~~l~~~  359 (363)
                      +++|+|.+++.+.
T Consensus        84 ~~~~~L~~~~~~~   96 (261)
T cd05148          84 MEKGSLLAFLRSP   96 (261)
T ss_pred             cccCCHHHHHhcC
Confidence            9999999999753

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.28  E-value=1.2e-11  Score=116.85  Aligned_cols=98  Identities=17%  Similarity=0.199  Sum_probs=82.6

Q ss_pred             HHHhccCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCe
Q 017984          264 LEKATNYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPE  339 (363)
Q Consensus       264 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  339 (363)
                      +....++|...+.||+|+||.||++... +++.+|+|.+...   .......+.+|+.++..++||||+++++++..++.
T Consensus        38 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~  117 (370)
T cd05621          38 LQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKY  117 (370)
T ss_pred             cCCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCE
Confidence            3344567889999999999999999964 5889999998642   22334568899999999999999999999999999


Q ss_pred             eEEEEEccCCCChhHHhhcCCC
Q 017984          340 SLLVYEFVPNQSLLDNLFDKML  361 (363)
Q Consensus       340 ~~lv~Ey~~~gsL~~~l~~~~~  361 (363)
                      .++||||+++|+|.+++.....
T Consensus       118 ~~lv~Ey~~gg~L~~~l~~~~~  139 (370)
T cd05621         118 LYMVMEYMPGGDLVNLMSNYDV  139 (370)
T ss_pred             EEEEEcCCCCCcHHHHHHhcCC
Confidence            9999999999999999876543

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=99.28  E-value=9.4e-12  Score=108.61  Aligned_cols=92  Identities=28%  Similarity=0.342  Sum_probs=80.3

Q ss_pred             cCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVY  344 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  344 (363)
                      ++|.....||.|+||+|..++. .+|..+|+|++...   .-...+...+|..+|+.+.||++++|++.+.+.+.+||||
T Consensus        44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm  123 (355)
T KOG0616|consen   44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM  123 (355)
T ss_pred             hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence            4566788999999999999986 46889999999764   2234566889999999999999999999999999999999


Q ss_pred             EccCCCChhHHhhcCC
Q 017984          345 EFVPNQSLLDNLFDKM  360 (363)
Q Consensus       345 Ey~~~gsL~~~l~~~~  360 (363)
                      ||++||.|+.+|++..
T Consensus       124 eyv~GGElFS~Lrk~~  139 (355)
T KOG0616|consen  124 EYVPGGELFSYLRKSG  139 (355)
T ss_pred             eccCCccHHHHHHhcC
Confidence            9999999999998743

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.27  E-value=9.6e-12  Score=117.64  Aligned_cols=95  Identities=18%  Similarity=0.205  Sum_probs=81.0

Q ss_pred             hccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEE
Q 017984          267 ATNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLL  342 (363)
Q Consensus       267 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  342 (363)
                      ..++|...+.||+|+||.||++.. .+++.+|+|++...   .....+.+.+|+.++..++||||+++++++..++..+|
T Consensus        41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l  120 (370)
T cd05596          41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM  120 (370)
T ss_pred             CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence            456788899999999999999986 45889999999642   22334558899999999999999999999999999999


Q ss_pred             EEEccCCCChhHHhhcCCC
Q 017984          343 VYEFVPNQSLLDNLFDKML  361 (363)
Q Consensus       343 v~Ey~~~gsL~~~l~~~~~  361 (363)
                      ||||+++|+|.+++.+...
T Consensus       121 v~Ey~~gg~L~~~l~~~~l  139 (370)
T cd05596         121 VMEYMPGGDLVNLMSNYDI  139 (370)
T ss_pred             EEcCCCCCcHHHHHHhcCC
Confidence            9999999999999876543

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.27  E-value=2.2e-11  Score=114.76  Aligned_cols=92  Identities=22%  Similarity=0.266  Sum_probs=79.7

Q ss_pred             cCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVY  344 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  344 (363)
                      ++|...+.||+|+||.||++.. .+++.||+|++...   .......+.+|+.++..++||||+++++.+...+..+|||
T Consensus         1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~   80 (360)
T cd05627           1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM   80 (360)
T ss_pred             CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            3577889999999999999986 45889999999642   2334567889999999999999999999999999999999


Q ss_pred             EccCCCChhHHhhcCC
Q 017984          345 EFVPNQSLLDNLFDKM  360 (363)
Q Consensus       345 Ey~~~gsL~~~l~~~~  360 (363)
                      ||+++|+|.++|.++.
T Consensus        81 E~~~gg~L~~~l~~~~   96 (360)
T cd05627          81 EFLPGGDMMTLLMKKD   96 (360)
T ss_pred             eCCCCccHHHHHHhcC
Confidence            9999999999987654

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.27  E-value=1.7e-11  Score=116.64  Aligned_cols=94  Identities=23%  Similarity=0.309  Sum_probs=82.9

Q ss_pred             hccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEE
Q 017984          267 ATNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLV  343 (363)
Q Consensus       267 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  343 (363)
                      ....|.....||+|.|+.|..+.. .++..||||.+.+.  .....+.+.+|+++|..++|||||+|+++...+..+|+|
T Consensus        54 ~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV  133 (596)
T KOG0586|consen   54 SVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLV  133 (596)
T ss_pred             cccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEE
Confidence            456788899999999999999996 45899999999764  344456699999999999999999999999999999999


Q ss_pred             EEccCCCChhHHhhcCC
Q 017984          344 YEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       344 ~Ey~~~gsL~~~l~~~~  360 (363)
                      |||..+|.+++||.++.
T Consensus       134 ~eya~~ge~~~yl~~~g  150 (596)
T KOG0586|consen  134 MEYASGGELFDYLVKHG  150 (596)
T ss_pred             EEeccCchhHHHHHhcc
Confidence            99999999999998654

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.26  E-value=6.1e-12  Score=119.54  Aligned_cols=94  Identities=28%  Similarity=0.452  Sum_probs=78.5

Q ss_pred             hccCCCcCceecccCceEEEEEEcC---CCC--EEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCee
Q 017984          267 ATNYFHESNKLGQGGSGSVYKGTLP---GGE--AVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPES  340 (363)
Q Consensus       267 ~~~~~~~~~~lg~G~~g~Vy~~~~~---~g~--~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  340 (363)
                      .++.+....+||+|.||.||+|.+.   .|.  .||||..+.. +....+.|+.|..+|++++|||||+|+|+|.+. ..
T Consensus       387 ~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~-P~  465 (974)
T KOG4257|consen  387 RRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ-PM  465 (974)
T ss_pred             ehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeecc-ce
Confidence            3444566778999999999999963   233  6899998863 556678899999999999999999999998764 68


Q ss_pred             EEEEEccCCCChhHHhhcCCC
Q 017984          341 LLVYEFVPNQSLLDNLFDKML  361 (363)
Q Consensus       341 ~lv~Ey~~~gsL~~~l~~~~~  361 (363)
                      |||||.++.|.|..||..+..
T Consensus       466 WivmEL~~~GELr~yLq~nk~  486 (974)
T KOG4257|consen  466 WIVMELAPLGELREYLQQNKD  486 (974)
T ss_pred             eEEEecccchhHHHHHHhccc
Confidence            999999999999999987653

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.26  E-value=3.1e-11  Score=111.95  Aligned_cols=86  Identities=23%  Similarity=0.193  Sum_probs=74.6

Q ss_pred             ceecccCceEEEEEEc-CCCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEccCCC
Q 017984          275 NKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQ  350 (363)
Q Consensus       275 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~~~g  350 (363)
                      +.||+|+||.||++.. .+|+.+|+|+++..   .......+.+|+.++.+++||||+++++++...+..+|||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~   80 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence            3699999999999986 56899999999753   2334556889999999999999999999999999999999999999


Q ss_pred             ChhHHhhcCC
Q 017984          351 SLLDNLFDKM  360 (363)
Q Consensus       351 sL~~~l~~~~  360 (363)
                      +|.+++..+.
T Consensus        81 ~L~~~l~~~~   90 (323)
T cd05571          81 ELFFHLSRER   90 (323)
T ss_pred             cHHHHHHHcC
Confidence            9999887644

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.26  E-value=3e-11  Score=112.11  Aligned_cols=86  Identities=23%  Similarity=0.184  Sum_probs=74.5

Q ss_pred             ceecccCceEEEEEEc-CCCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEccCCC
Q 017984          275 NKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQ  350 (363)
Q Consensus       275 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~~~g  350 (363)
                      +.||+|+||.||++.. .+|+.||+|+++..   .......+.+|+.++..++||||+++++++...+..+|||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence            4689999999999986 46899999999743   2334556889999999999999999999999999999999999999


Q ss_pred             ChhHHhhcCC
Q 017984          351 SLLDNLFDKM  360 (363)
Q Consensus       351 sL~~~l~~~~  360 (363)
                      +|..++..+.
T Consensus        81 ~L~~~l~~~~   90 (323)
T cd05595          81 ELFFHLSRER   90 (323)
T ss_pred             cHHHHHHHcC
Confidence            9999887654

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.26  E-value=2.7e-11  Score=112.80  Aligned_cols=90  Identities=19%  Similarity=0.167  Sum_probs=78.4

Q ss_pred             cCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVY  344 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  344 (363)
                      ++|...+.||+|+||.||++.. .+++.||+|++...   .....+.|.+|+.++..++|+||+++++++..++..++||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM   80 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence            3678889999999999999996 45889999999642   2233456899999999999999999999999999999999


Q ss_pred             EccCCCChhHHhhc
Q 017984          345 EFVPNQSLLDNLFD  358 (363)
Q Consensus       345 Ey~~~gsL~~~l~~  358 (363)
                      ||+++|+|.++|.+
T Consensus        81 e~~~g~~L~~~l~~   94 (331)
T cd05597          81 DYYVGGDLLTLLSK   94 (331)
T ss_pred             ecCCCCcHHHHHHH
Confidence            99999999999865

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.25  E-value=2e-11  Score=110.69  Aligned_cols=92  Identities=22%  Similarity=0.363  Sum_probs=82.5

Q ss_pred             hccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEE
Q 017984          267 ATNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYE  345 (363)
Q Consensus       267 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  345 (363)
                      +.++|...+.||+|++|.||++.. .+++.+|+|.+........+.|.+|++++++++||||+++++.+..+...++|||
T Consensus         3 ~~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (280)
T cd06611           3 PNDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIE   82 (280)
T ss_pred             chhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEee
Confidence            346688888999999999999997 4588999999987666667789999999999999999999999999999999999


Q ss_pred             ccCCCChhHHhhc
Q 017984          346 FVPNQSLLDNLFD  358 (363)
Q Consensus       346 y~~~gsL~~~l~~  358 (363)
                      |+++++|.+++.+
T Consensus        83 ~~~~~~L~~~~~~   95 (280)
T cd06611          83 FCDGGALDSIMLE   95 (280)
T ss_pred             ccCCCcHHHHHHH
Confidence            9999999999865

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.25  E-value=4.9e-11  Score=107.12  Aligned_cols=90  Identities=29%  Similarity=0.467  Sum_probs=78.3

Q ss_pred             CCCcCceecccCceEEEEEEcCCCCEEEEEEeccCC------hhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEE
Q 017984          270 YFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNT------TQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLV  343 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  343 (363)
                      +|...+.||+|+||.||++...+++.+|+|.+....      ......+.+|++++++++|+||+++++++...+..++|
T Consensus         1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv   80 (265)
T cd06631           1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF   80 (265)
T ss_pred             CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence            366788999999999999998788999999986432      12235689999999999999999999999999999999


Q ss_pred             EEccCCCChhHHhhcC
Q 017984          344 YEFVPNQSLLDNLFDK  359 (363)
Q Consensus       344 ~Ey~~~gsL~~~l~~~  359 (363)
                      |||+++++|.+++.+.
T Consensus        81 ~e~~~~~~L~~~l~~~   96 (265)
T cd06631          81 MEFVPGGSISSILNRF   96 (265)
T ss_pred             EecCCCCcHHHHHHhc
Confidence            9999999999999764

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.25  E-value=8.6e-12  Score=118.13  Aligned_cols=95  Identities=31%  Similarity=0.391  Sum_probs=80.1

Q ss_pred             HHhccCCCcCceecccCceEEEEEEc------CCCCEEEEEEeccC-ChhhHHHHHHHHHHHhcC-CCCCccceeeEEEe
Q 017984          265 EKATNYFHESNKLGQGGSGSVYKGTL------PGGEAVAVKRLFYN-TTQWVDHFFNEVNLISGI-NHKNLVKLLGCSIT  336 (363)
Q Consensus       265 ~~~~~~~~~~~~lg~G~~g~Vy~~~~------~~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~  336 (363)
                      ....++|...+.||+|+||.||++..      .++..||+|.++.. .......+.+|+.+++.+ +|+||+++++++..
T Consensus        34 ~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~  113 (374)
T cd05106          34 EFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTH  113 (374)
T ss_pred             cccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecC
Confidence            34456788999999999999999873      22457999999754 334456789999999999 89999999999999


Q ss_pred             CCeeEEEEEccCCCChhHHhhcC
Q 017984          337 GPESLLVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       337 ~~~~~lv~Ey~~~gsL~~~l~~~  359 (363)
                      .+..+|||||+++|+|.++|+.+
T Consensus       114 ~~~~~lv~ey~~~g~L~~~l~~~  136 (374)
T cd05106         114 GGPVLVITEYCCYGDLLNFLRKK  136 (374)
T ss_pred             CCCeEEeHhhccCCcHHHHHHhh
Confidence            99999999999999999999753

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.25  E-value=2.9e-11  Score=110.06  Aligned_cols=88  Identities=23%  Similarity=0.280  Sum_probs=76.2

Q ss_pred             CCcCceecccCceEEEEEEc-CCCCEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEc
Q 017984          271 FHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNT---TQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       271 ~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      |...+.||+|+||.||++.. .+|+.||+|.+....   ......+.+|+.++.+++|+||+++.+++.+.+..++||||
T Consensus         2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~   81 (285)
T cd05631           2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI   81 (285)
T ss_pred             ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence            66778999999999999986 568999999986432   22344688999999999999999999999999999999999


Q ss_pred             cCCCChhHHhhc
Q 017984          347 VPNQSLLDNLFD  358 (363)
Q Consensus       347 ~~~gsL~~~l~~  358 (363)
                      +++|+|.+++..
T Consensus        82 ~~~g~L~~~~~~   93 (285)
T cd05631          82 MNGGDLKFHIYN   93 (285)
T ss_pred             cCCCcHHHHHHh
Confidence            999999988764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.25  E-value=2.4e-11  Score=114.08  Aligned_cols=94  Identities=22%  Similarity=0.359  Sum_probs=80.3

Q ss_pred             HhccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC----Ch-hhHHHHHHHHHHHhcCC-CCCccceeeEEEeCC
Q 017984          266 KATNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN----TT-QWVDHFFNEVNLISGIN-HKNLVKLLGCSITGP  338 (363)
Q Consensus       266 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~----~~-~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~  338 (363)
                      ...+.|...+.||+|.||.|+.+.. .+++.||+|++...    .. ...+.+.+|+.+++.++ ||||++++.++....
T Consensus        14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~   93 (370)
T KOG0583|consen   14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT   93 (370)
T ss_pred             cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence            3456788999999999999999985 56899999977653    11 22445678999999998 999999999999999


Q ss_pred             eeEEEEEccCCCChhHHhhcC
Q 017984          339 ESLLVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       339 ~~~lv~Ey~~~gsL~~~l~~~  359 (363)
                      ..++||||+.+|+|.++|.++
T Consensus        94 ~~~ivmEy~~gGdL~~~i~~~  114 (370)
T KOG0583|consen   94 KIYIVMEYCSGGDLFDYIVNK  114 (370)
T ss_pred             eEEEEEEecCCccHHHHHHHc
Confidence            999999999999999999873

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.25  E-value=2.8e-11  Score=110.12  Aligned_cols=89  Identities=22%  Similarity=0.275  Sum_probs=76.3

Q ss_pred             CCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEE
Q 017984          270 YFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNT---TQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYE  345 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  345 (363)
                      +|...++||+|+||.||++.. .+++.||+|++....   ......+.+|+.+++.++||||+++++.+..++.+++|||
T Consensus         1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence            366778999999999999986 468899999996532   2223457899999999999999999999999999999999


Q ss_pred             ccCCCChhHHhhc
Q 017984          346 FVPNQSLLDNLFD  358 (363)
Q Consensus       346 y~~~gsL~~~l~~  358 (363)
                      |+++|+|.+++..
T Consensus        81 ~~~~~~L~~~~~~   93 (285)
T cd05605          81 LMNGGDLKFHIYN   93 (285)
T ss_pred             ccCCCcHHHHHHh
Confidence            9999999988864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.25  E-value=2.2e-11  Score=115.18  Aligned_cols=101  Identities=17%  Similarity=0.176  Sum_probs=84.5

Q ss_pred             hHHHHHhccCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEe
Q 017984          261 YETLEKATNYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSIT  336 (363)
Q Consensus       261 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~  336 (363)
                      +.++....++|...+.||+|+||.||++... +++.+|+|++...   .....+.+.+|+.++..++||||+++++.+..
T Consensus        35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~  114 (371)
T cd05622          35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD  114 (371)
T ss_pred             HhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence            3444555678999999999999999999964 5889999998642   22334568899999999999999999999999


Q ss_pred             CCeeEEEEEccCCCChhHHhhcCCC
Q 017984          337 GPESLLVYEFVPNQSLLDNLFDKML  361 (363)
Q Consensus       337 ~~~~~lv~Ey~~~gsL~~~l~~~~~  361 (363)
                      ++..++||||+++|+|.+++.....
T Consensus       115 ~~~~~lv~Ey~~gg~L~~~~~~~~~  139 (371)
T cd05622         115 DRYLYMVMEYMPGGDLVNLMSNYDV  139 (371)
T ss_pred             CCEEEEEEcCCCCCcHHHHHHhcCC
Confidence            9999999999999999999876543

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.25  E-value=1.9e-11  Score=114.89  Aligned_cols=93  Identities=24%  Similarity=0.312  Sum_probs=81.2

Q ss_pred             hccCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccCCh---hhHHHHHHHHHHHhcCC-CCCccceeeEEEeCCeeE
Q 017984          267 ATNYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYNTT---QWVDHFFNEVNLISGIN-HKNLVKLLGCSITGPESL  341 (363)
Q Consensus       267 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~  341 (363)
                      ....|...+.||+|.||.||++... +|+.+|+|.+.+...   .....+.+|+.+|+++. |||||.+.+.+++...++
T Consensus        33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~  112 (382)
T KOG0032|consen   33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVY  112 (382)
T ss_pred             ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEE
Confidence            3456778899999999999999975 499999999975422   34567999999999998 999999999999999999


Q ss_pred             EEEEccCCCChhHHhhcC
Q 017984          342 LVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       342 lv~Ey~~~gsL~~~l~~~  359 (363)
                      +|||++.||+|.+.|...
T Consensus       113 lvmEL~~GGeLfd~i~~~  130 (382)
T KOG0032|consen  113 LVMELCEGGELFDRIVKK  130 (382)
T ss_pred             EEEEecCCchHHHHHHHc
Confidence            999999999999988653

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.25  E-value=2.4e-11  Score=108.92  Aligned_cols=91  Identities=31%  Similarity=0.418  Sum_probs=80.0

Q ss_pred             ccCCCcCceecccCceEEEEEEcCCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEcc
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFV  347 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~  347 (363)
                      .++|...++||+|+||.||++...++..||+|.+.... ...+.+.+|+.++++++|+||+++++.+...+..+++|||+
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   83 (261)
T cd05072           5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYM   83 (261)
T ss_pred             hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecC
Confidence            35677889999999999999998778889999986543 23567999999999999999999999999999999999999


Q ss_pred             CCCChhHHhhcC
Q 017984          348 PNQSLLDNLFDK  359 (363)
Q Consensus       348 ~~gsL~~~l~~~  359 (363)
                      ++|+|.++|...
T Consensus        84 ~~~~L~~~l~~~   95 (261)
T cd05072          84 AKGSLLDFLKSD   95 (261)
T ss_pred             CCCcHHHHHHHh
Confidence            999999998653

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.25  E-value=1.2e-12  Score=120.79  Aligned_cols=93  Identities=28%  Similarity=0.409  Sum_probs=77.1

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHH-HHHHHHHHHhcCC-CCCccceeeEEEeCC-eeEEE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVD-HFFNEVNLISGIN-HKNLVKLLGCSITGP-ESLLV  343 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~-~~~~E~~~l~~l~-h~niv~l~~~~~~~~-~~~lv  343 (363)
                      .++|...++||.|.||.||+++- .+|..||||+++..-..+.+ .=++|+..|++|+ |||||+|.+++.+.+ .+++|
T Consensus         9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fV   88 (538)
T KOG0661|consen    9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFV   88 (538)
T ss_pred             HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeee
Confidence            35577788999999999999994 56889999999764222222 2479999999998 999999999999887 99999


Q ss_pred             EEccCCCChhHHhhcCCC
Q 017984          344 YEFVPNQSLLDNLFDKML  361 (363)
Q Consensus       344 ~Ey~~~gsL~~~l~~~~~  361 (363)
                      ||||+. +|.+++.+++.
T Consensus        89 fE~Md~-NLYqLmK~R~r  105 (538)
T KOG0661|consen   89 FEFMDC-NLYQLMKDRNR  105 (538)
T ss_pred             HHhhhh-hHHHHHhhcCC
Confidence            999965 99999987643

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.24  E-value=3.9e-11  Score=107.88  Aligned_cols=91  Identities=24%  Similarity=0.392  Sum_probs=78.7

Q ss_pred             cCCCcCceecccCceEEEEEEcC----CCCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTLP----GGEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLV  343 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~~----~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  343 (363)
                      ++|...+.||+|+||.||+|.+.    +...||+|.++.. ......+|.+|+.++.+++||||+++++.+...+..++|
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv   83 (266)
T cd05033           4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII   83 (266)
T ss_pred             HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence            46788999999999999999863    2457999998754 344456799999999999999999999999999999999


Q ss_pred             EEccCCCChhHHhhcC
Q 017984          344 YEFVPNQSLLDNLFDK  359 (363)
Q Consensus       344 ~Ey~~~gsL~~~l~~~  359 (363)
                      |||+++++|.+++..+
T Consensus        84 ~e~~~~~~L~~~~~~~   99 (266)
T cd05033          84 TEYMENGSLDKFLREN   99 (266)
T ss_pred             EEcCCCCCHHHHHHhc
Confidence            9999999999998654

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.24  E-value=4.3e-12  Score=122.32  Aligned_cols=91  Identities=29%  Similarity=0.437  Sum_probs=76.8

Q ss_pred             CCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeC------CeeE
Q 017984          270 YFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITG------PESL  341 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~~~  341 (363)
                      .|...+.||+|+||.||+|+. .+|+.||||.+... ....++.+.+|+++|++++|+|||++++.-++.      ....
T Consensus        14 ~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~v   93 (732)
T KOG4250|consen   14 LWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPV   93 (732)
T ss_pred             ceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccce
Confidence            355677899999999999995 56999999999753 345567899999999999999999999876543      3678


Q ss_pred             EEEEccCCCChhHHhhcCC
Q 017984          342 LVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       342 lv~Ey~~~gsL~~~l~~~~  360 (363)
                      +|||||++|||..+|.+..
T Consensus        94 lvmEyC~gGsL~~~L~~PE  112 (732)
T KOG4250|consen   94 LVMEYCSGGSLRKVLNSPE  112 (732)
T ss_pred             EEEeecCCCcHHHHhcCcc
Confidence            9999999999999997643

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.24  E-value=6.4e-12  Score=118.36  Aligned_cols=94  Identities=26%  Similarity=0.457  Sum_probs=82.3

Q ss_pred             hccCCCcCceecccCceEEEEEE-cCCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEE
Q 017984          267 ATNYFHESNKLGQGGSGSVYKGT-LPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYE  345 (363)
Q Consensus       267 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  345 (363)
                      +...|..-.+||+|.-|.||.+. ..+++.||||++........+-+++|+.+|+..+|+|||+++..+...+++|+|||
T Consensus       271 P~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVME  350 (550)
T KOG0578|consen  271 PRSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVME  350 (550)
T ss_pred             hhhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEe
Confidence            44567778899999999999998 46788999999987655556678999999999999999999999999999999999


Q ss_pred             ccCCCChhHHhhcCC
Q 017984          346 FVPNQSLLDNLFDKM  360 (363)
Q Consensus       346 y~~~gsL~~~l~~~~  360 (363)
                      ||+||+|.+.+....
T Consensus       351 ym~ggsLTDvVt~~~  365 (550)
T KOG0578|consen  351 YMEGGSLTDVVTKTR  365 (550)
T ss_pred             ecCCCchhhhhhccc
Confidence            999999999886543

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.23  E-value=5.7e-11  Score=110.47  Aligned_cols=86  Identities=24%  Similarity=0.214  Sum_probs=74.7

Q ss_pred             ceecccCceEEEEEEc-CCCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEccCCC
Q 017984          275 NKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQ  350 (363)
Q Consensus       275 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~~~g  350 (363)
                      +.||+|+||.||++.. .+++.||+|++...   .......+.+|+.++..++||||+++++++...+..+|||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g   80 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG   80 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence            4689999999999986 46899999999753   2334567899999999999999999999999999999999999999


Q ss_pred             ChhHHhhcCC
Q 017984          351 SLLDNLFDKM  360 (363)
Q Consensus       351 sL~~~l~~~~  360 (363)
                      +|.+++..+.
T Consensus        81 ~L~~~l~~~~   90 (328)
T cd05593          81 ELFFHLSRER   90 (328)
T ss_pred             CHHHHHHhcC
Confidence            9998887554

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.23  E-value=3.9e-11  Score=111.76  Aligned_cols=90  Identities=19%  Similarity=0.112  Sum_probs=78.2

Q ss_pred             cCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVY  344 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  344 (363)
                      ++|...+.||+|+||.||++... +++.||+|.+...   .......+.+|+.++..++|+||+++++++...+..+|||
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~   80 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM   80 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            46788899999999999999964 5789999998642   2233456889999999999999999999999999999999


Q ss_pred             EccCCCChhHHhhc
Q 017984          345 EFVPNQSLLDNLFD  358 (363)
Q Consensus       345 Ey~~~gsL~~~l~~  358 (363)
                      ||+++|+|.++|.+
T Consensus        81 Ey~~gg~L~~~l~~   94 (331)
T cd05624          81 DYYVGGDLLTLLSK   94 (331)
T ss_pred             eCCCCCcHHHHHHH
Confidence            99999999999975

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.23  E-value=4.2e-11  Score=110.55  Aligned_cols=84  Identities=20%  Similarity=0.218  Sum_probs=73.1

Q ss_pred             ecccCceEEEEEEcC-CCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEccCCCCh
Q 017984          277 LGQGGSGSVYKGTLP-GGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQSL  352 (363)
Q Consensus       277 lg~G~~g~Vy~~~~~-~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~~~gsL  352 (363)
                      ||+|+||.||++... +++.||+|++...   .......+.+|+.++.+++||||+++++++...+..++||||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L   80 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL   80 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence            699999999999964 5889999999642   334456788999999999999999999999999999999999999999


Q ss_pred             hHHhhcCC
Q 017984          353 LDNLFDKM  360 (363)
Q Consensus       353 ~~~l~~~~  360 (363)
                      .+++..+.
T Consensus        81 ~~~l~~~~   88 (312)
T cd05585          81 FHHLQREG   88 (312)
T ss_pred             HHHHHhcC
Confidence            99987543

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=99.23  E-value=7.8e-12  Score=110.82  Aligned_cols=91  Identities=23%  Similarity=0.323  Sum_probs=74.1

Q ss_pred             cCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCCh--hhHHHHHHHHHHHhcCCCCCccceeeEEEe--CCeeEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTT--QWVDHFFNEVNLISGINHKNLVKLLGCSIT--GPESLLV  343 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv  343 (363)
                      +.|...+.|++|.||.||++.. ++++.||+|+++....  ...-.-++||.+|.+++|||||.+..+...  -+.+|||
T Consensus        76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~V  155 (419)
T KOG0663|consen   76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIV  155 (419)
T ss_pred             HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeee
Confidence            4567788999999999999996 5688999999975421  222235899999999999999999988764  3579999


Q ss_pred             EEccCCCChhHHhhcCC
Q 017984          344 YEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       344 ~Ey~~~gsL~~~l~~~~  360 (363)
                      ||||++ ||..+|...+
T Consensus       156 Me~~Eh-DLksl~d~m~  171 (419)
T KOG0663|consen  156 MEYVEH-DLKSLMETMK  171 (419)
T ss_pred             HHHHHh-hHHHHHHhcc
Confidence            999987 9999887543

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.23  E-value=2.7e-11  Score=113.52  Aligned_cols=91  Identities=23%  Similarity=0.310  Sum_probs=79.8

Q ss_pred             cCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVY  344 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  344 (363)
                      ++|...+.||+|+||.||++... +++.||+|++...   .......+.+|+.++..++||||+++++.+..++..++||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (350)
T cd05573           1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM   80 (350)
T ss_pred             CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence            35788899999999999999964 6899999999743   2234567899999999999999999999999999999999


Q ss_pred             EccCCCChhHHhhcC
Q 017984          345 EFVPNQSLLDNLFDK  359 (363)
Q Consensus       345 Ey~~~gsL~~~l~~~  359 (363)
                      ||+++|+|.+++.+.
T Consensus        81 e~~~~~~L~~~l~~~   95 (350)
T cd05573          81 EYMPGGDLMNLLIRK   95 (350)
T ss_pred             cCCCCCCHHHHHHHc
Confidence            999999999998765

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.23  E-value=4.2e-12  Score=111.83  Aligned_cols=97  Identities=26%  Similarity=0.311  Sum_probs=85.3

Q ss_pred             cchHHHHHhccCCCcCceecccCceEEEEEE-cCCCCEEEEEEeccCChhhHHHHHHHHHHHhcCC-CCCccceeeEEEe
Q 017984          259 FSYETLEKATNYFHESNKLGQGGSGSVYKGT-LPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGIN-HKNLVKLLGCSIT  336 (363)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~  336 (363)
                      -+++++.+.|     .++||+|+++.|-.++ +.+|.++|||++.+.....+.+..+|++++...+ |+||+.|+.++++
T Consensus        73 g~F~d~YkLt-----~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEd  147 (463)
T KOG0607|consen   73 GKFEDMYKLT-----SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFED  147 (463)
T ss_pred             chHHHHHHhH-----HHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcc
Confidence            3456666655     4579999999999888 5789999999999887778888999999999885 9999999999999


Q ss_pred             CCeeEEEEEccCCCChhHHhhcCC
Q 017984          337 GPESLLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       337 ~~~~~lv~Ey~~~gsL~~~l~~~~  360 (363)
                      +...|||||-|.||+|..+|+++.
T Consensus       148 d~~FYLVfEKm~GGplLshI~~~~  171 (463)
T KOG0607|consen  148 DTRFYLVFEKMRGGPLLSHIQKRK  171 (463)
T ss_pred             cceEEEEEecccCchHHHHHHHhh
Confidence            999999999999999999998764

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.23  E-value=2.6e-11  Score=109.75  Aligned_cols=83  Identities=30%  Similarity=0.409  Sum_probs=71.1

Q ss_pred             eecccCceEEEEEEcCC-------------------------CCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccce
Q 017984          276 KLGQGGSGSVYKGTLPG-------------------------GEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKL  330 (363)
Q Consensus       276 ~lg~G~~g~Vy~~~~~~-------------------------g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l  330 (363)
                      .||+|+||.||+|.+..                         ...|++|.+.........+|.+|+.+++.++||||+++
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~   81 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV   81 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence            68999999999997411                         13588999876545555679999999999999999999


Q ss_pred             eeEEEeCCeeEEEEEccCCCChhHHhhc
Q 017984          331 LGCSITGPESLLVYEFVPNQSLLDNLFD  358 (363)
Q Consensus       331 ~~~~~~~~~~~lv~Ey~~~gsL~~~l~~  358 (363)
                      ++++......+|||||+++|+|..++..
T Consensus        82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~  109 (274)
T cd05076          82 HGVCVRGSENIMVEEFVEHGPLDVCLRK  109 (274)
T ss_pred             EEEEEeCCceEEEEecCCCCcHHHHHHh
Confidence            9999999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.23  E-value=2.7e-11  Score=109.65  Aligned_cols=91  Identities=27%  Similarity=0.431  Sum_probs=78.8

Q ss_pred             cCCCcCceecccCceEEEEEEcC------CCCEEEEEEeccCChh-hHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTLP------GGEAVAVKRLFYNTTQ-WVDHFFNEVNLISGINHKNLVKLLGCSITGPESL  341 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  341 (363)
                      ++|...+.||+|+||.||++...      ++..||+|.++..... ..+.|.+|++++.+++||||+++++++......+
T Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~   84 (280)
T cd05049           5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI   84 (280)
T ss_pred             HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence            45677889999999999999853      2478999999764333 4578999999999999999999999999999999


Q ss_pred             EEEEccCCCChhHHhhcC
Q 017984          342 LVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       342 lv~Ey~~~gsL~~~l~~~  359 (363)
                      +||||+++|+|.++|..+
T Consensus        85 lv~e~~~~~~L~~~i~~~  102 (280)
T cd05049          85 MVFEYMEHGDLNKFLRSH  102 (280)
T ss_pred             EEEecCCCCCHHHHHHhc
Confidence            999999999999999754

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.22  E-value=5.8e-11  Score=105.62  Aligned_cols=85  Identities=33%  Similarity=0.493  Sum_probs=74.8

Q ss_pred             ceecccCceEEEEEEcCCCCEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEccCCCChh
Q 017984          275 NKLGQGGSGSVYKGTLPGGEAVAVKRLFYNT-TQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQSLL  353 (363)
Q Consensus       275 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~~~gsL~  353 (363)
                      ++||+|+||.||++...+++.+|+|.+.... ......|.+|+.++..++||||+++++++...+..++||||+++++|.
T Consensus         1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   80 (250)
T cd05085           1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL   80 (250)
T ss_pred             CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence            3689999999999998888899999987543 333457999999999999999999999999999999999999999999


Q ss_pred             HHhhcC
Q 017984          354 DNLFDK  359 (363)
Q Consensus       354 ~~l~~~  359 (363)
                      +++...
T Consensus        81 ~~~~~~   86 (250)
T cd05085          81 SFLRKK   86 (250)
T ss_pred             HHHHhc
Confidence            998653

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.22  E-value=5.5e-11  Score=110.01  Aligned_cols=86  Identities=26%  Similarity=0.273  Sum_probs=73.2

Q ss_pred             ceecccCceEEEEEEc----CCCCEEEEEEeccCC--hhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEccC
Q 017984          275 NKLGQGGSGSVYKGTL----PGGEAVAVKRLFYNT--TQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVP  348 (363)
Q Consensus       275 ~~lg~G~~g~Vy~~~~----~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~~  348 (363)
                      +.||+|+||.||++..    .+|+.+|+|++....  ......+.+|++++.+++||||+++++++..++..+|||||++
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   81 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR   81 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence            5799999999999874    357899999997532  2234567899999999999999999999999999999999999


Q ss_pred             CCChhHHhhcCC
Q 017984          349 NQSLLDNLFDKM  360 (363)
Q Consensus       349 ~gsL~~~l~~~~  360 (363)
                      +|+|.+++.++.
T Consensus        82 ~~~L~~~l~~~~   93 (318)
T cd05582          82 GGDLFTRLSKEV   93 (318)
T ss_pred             CCcHHHHHHHcC
Confidence            999999987543

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.22  E-value=6.7e-11  Score=108.35  Aligned_cols=93  Identities=26%  Similarity=0.420  Sum_probs=82.1

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEc
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      ..+|...+.||+|+||.||++.. .+++.||+|.+........+.+.+|+.+++.++||||+++++++..++..++||||
T Consensus        18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~   97 (297)
T cd06656          18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY   97 (297)
T ss_pred             hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecc
Confidence            35678889999999999999995 56899999999765545556789999999999999999999999999999999999


Q ss_pred             cCCCChhHHhhcCC
Q 017984          347 VPNQSLLDNLFDKM  360 (363)
Q Consensus       347 ~~~gsL~~~l~~~~  360 (363)
                      +++++|.+++.+..
T Consensus        98 ~~~~~L~~~~~~~~  111 (297)
T cd06656          98 LAGGSLTDVVTETC  111 (297)
T ss_pred             cCCCCHHHHHHhCC
Confidence            99999999987544

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.22  E-value=5.9e-11  Score=107.76  Aligned_cols=91  Identities=32%  Similarity=0.445  Sum_probs=77.8

Q ss_pred             cCCCcCceecccCceEEEEEEc-----CCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEe--CCeeE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL-----PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSIT--GPESL  341 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~-----~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~  341 (363)
                      .+|...+.||+|+||.||++..     .++..||+|.+........+.|.+|++++.+++||||+++++++..  ....+
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~   83 (284)
T cd05081           4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR   83 (284)
T ss_pred             ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence            4577888999999999999974     3478999999987666667789999999999999999999998754  34689


Q ss_pred             EEEEccCCCChhHHhhcC
Q 017984          342 LVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       342 lv~Ey~~~gsL~~~l~~~  359 (363)
                      +||||+++|+|.+++.+.
T Consensus        84 lv~e~~~~~~L~~~l~~~  101 (284)
T cd05081          84 LVMEYLPYGSLRDYLQKH  101 (284)
T ss_pred             EEEEecCCCCHHHHHHhc
Confidence            999999999999998754

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.22  E-value=3.8e-11  Score=107.64  Aligned_cols=93  Identities=26%  Similarity=0.326  Sum_probs=81.0

Q ss_pred             hccCCCcCceecccCceEEEEEEcCCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEc
Q 017984          267 ATNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       267 ~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      ..++|...+.||+|++|.||++...+++.||+|.++... ...++|.+|+.++.+++||||+++++++...+..++||||
T Consensus         4 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   82 (261)
T cd05068           4 DRTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTEL   82 (261)
T ss_pred             chhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeec
Confidence            345688889999999999999998777889999987543 2346799999999999999999999999999999999999


Q ss_pred             cCCCChhHHhhcCC
Q 017984          347 VPNQSLLDNLFDKM  360 (363)
Q Consensus       347 ~~~gsL~~~l~~~~  360 (363)
                      +++++|.+++....
T Consensus        83 ~~~~~L~~~~~~~~   96 (261)
T cd05068          83 MKYGSLLEYLQGGA   96 (261)
T ss_pred             ccCCcHHHHHhccC
Confidence            99999999987543

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=99.22  E-value=1.8e-11  Score=111.38  Aligned_cols=91  Identities=25%  Similarity=0.256  Sum_probs=78.5

Q ss_pred             CCCcCceecccCceEEEEEEcCC-CCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEE
Q 017984          270 YFHESNKLGQGGSGSVYKGTLPG-GEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYE  345 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~~~~-g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  345 (363)
                      .|...+.||.|.-|.||.+.+.+ +..+|+|++.+.   ......+...|-+||+.++||.++.|+..++.++..+|+||
T Consensus        78 ~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~me  157 (459)
T KOG0610|consen   78 HFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVME  157 (459)
T ss_pred             HHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEe
Confidence            34566789999999999999864 589999999754   33445567889999999999999999999999999999999


Q ss_pred             ccCCCChhHHhhcCC
Q 017984          346 FVPNQSLLDNLFDKM  360 (363)
Q Consensus       346 y~~~gsL~~~l~~~~  360 (363)
                      ||+||+|..++++++
T Consensus       158 yCpGGdL~~LrqkQp  172 (459)
T KOG0610|consen  158 YCPGGDLHSLRQKQP  172 (459)
T ss_pred             cCCCccHHHHHhhCC
Confidence            999999999888654

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.22  E-value=4.5e-11  Score=108.65  Aligned_cols=91  Identities=20%  Similarity=0.266  Sum_probs=79.0

Q ss_pred             cCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEc
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      ++|+..+.||+|+||.||++.. ++++.+|+|++... .......|.+|++++..++||||+++++.+...+..+|||||
T Consensus         5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (284)
T cd06620           5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF   84 (284)
T ss_pred             HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence            4566778999999999999986 46889999988654 334456799999999999999999999999999999999999


Q ss_pred             cCCCChhHHhhcC
Q 017984          347 VPNQSLLDNLFDK  359 (363)
Q Consensus       347 ~~~gsL~~~l~~~  359 (363)
                      +++++|.+++.+.
T Consensus        85 ~~~~~L~~~~~~~   97 (284)
T cd06620          85 MDCGSLDRIYKKG   97 (284)
T ss_pred             CCCCCHHHHHHhc
Confidence            9999999988654

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.22  E-value=8.6e-11  Score=104.80  Aligned_cols=90  Identities=30%  Similarity=0.427  Sum_probs=78.5

Q ss_pred             CCcCceecccCceEEEEEEcC-CCCEEEEEEeccCC-----hhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEE
Q 017984          271 FHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYNT-----TQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVY  344 (363)
Q Consensus       271 ~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  344 (363)
                      |...+.||+|++|.||++... +++.|++|.+....     .+..+.+.+|+.+++.++|+||+++++++......++++
T Consensus         2 ~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~   81 (258)
T cd06632           2 WRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFL   81 (258)
T ss_pred             ccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEE
Confidence            567789999999999999975 68999999986432     234567999999999999999999999999999999999


Q ss_pred             EccCCCChhHHhhcCC
Q 017984          345 EFVPNQSLLDNLFDKM  360 (363)
Q Consensus       345 Ey~~~gsL~~~l~~~~  360 (363)
                      ||+++++|.+++.+..
T Consensus        82 e~~~~~~L~~~~~~~~   97 (258)
T cd06632          82 ELVPGGSLAKLLKKYG   97 (258)
T ss_pred             EecCCCcHHHHHHhcC
Confidence            9999999999987543

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.22  E-value=4.4e-11  Score=111.21  Aligned_cols=91  Identities=23%  Similarity=0.208  Sum_probs=79.4

Q ss_pred             cCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVY  344 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  344 (363)
                      ++|...+.||+|+||.||++.. .+++.+|+|+++..   .....+.+.+|+.++..++||||+++++++...+..+|||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (330)
T cd05601           1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM   80 (330)
T ss_pred             CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence            3678889999999999999986 46889999999753   2234566899999999999999999999999999999999


Q ss_pred             EccCCCChhHHhhcC
Q 017984          345 EFVPNQSLLDNLFDK  359 (363)
Q Consensus       345 Ey~~~gsL~~~l~~~  359 (363)
                      ||+++|+|.+++.+.
T Consensus        81 e~~~~~~L~~~l~~~   95 (330)
T cd05601          81 EYQPGGDLLSLLNRY   95 (330)
T ss_pred             CCCCCCCHHHHHHHh
Confidence            999999999999764

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.22  E-value=3.6e-11  Score=112.97  Aligned_cols=86  Identities=27%  Similarity=0.406  Sum_probs=74.2

Q ss_pred             CCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEcc
Q 017984          270 YFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFV  347 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~  347 (363)
                      +|...+.||+|+||.||++.. .+++.||||++... .......|.+|+++++.++|+||+++++++...+.+++||||+
T Consensus        75 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~  154 (353)
T PLN00034         75 ELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFM  154 (353)
T ss_pred             HHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecC
Confidence            345667899999999999996 46899999999654 3344567999999999999999999999999999999999999


Q ss_pred             CCCChhHH
Q 017984          348 PNQSLLDN  355 (363)
Q Consensus       348 ~~gsL~~~  355 (363)
                      ++|+|...
T Consensus       155 ~~~~L~~~  162 (353)
T PLN00034        155 DGGSLEGT  162 (353)
T ss_pred             CCCccccc
Confidence            99998654

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.22  E-value=6.6e-11  Score=109.77  Aligned_cols=86  Identities=26%  Similarity=0.343  Sum_probs=73.4

Q ss_pred             ceecccCceEEEEEEc----CCCCEEEEEEeccC----ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEc
Q 017984          275 NKLGQGGSGSVYKGTL----PGGEAVAVKRLFYN----TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       275 ~~lg~G~~g~Vy~~~~----~~g~~vavK~l~~~----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      +.||+|+||.||++..    .+++.||+|+++..    .......+.+|+.++..++||||+++++++..++..++||||
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~   81 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY   81 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence            5799999999999985    35789999999742    222345678999999999999999999999999999999999


Q ss_pred             cCCCChhHHhhcCC
Q 017984          347 VPNQSLLDNLFDKM  360 (363)
Q Consensus       347 ~~~gsL~~~l~~~~  360 (363)
                      +++|+|.+++..+.
T Consensus        82 ~~~~~L~~~~~~~~   95 (323)
T cd05584          82 LSGGELFMHLEREG   95 (323)
T ss_pred             CCCchHHHHHHHcC
Confidence            99999999987544

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.21  E-value=4.2e-11  Score=109.95  Aligned_cols=91  Identities=27%  Similarity=0.361  Sum_probs=81.1

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNT-TQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYE  345 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  345 (363)
                      .+.|.....||.|.-+.||++.. +.++.||||++.... ....+.+.+|+..|..++||||++++..|..+..+|+||.
T Consensus        25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmp  104 (516)
T KOG0582|consen   25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMP  104 (516)
T ss_pred             ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeeh
Confidence            45688889999999999999994 678999999997542 2336889999999999999999999999999999999999


Q ss_pred             ccCCCChhHHhhc
Q 017984          346 FVPNQSLLDNLFD  358 (363)
Q Consensus       346 y~~~gsL~~~l~~  358 (363)
                      ||.+||+.++|+.
T Consensus       105 fMa~GS~ldIik~  117 (516)
T KOG0582|consen  105 FMAGGSLLDIIKT  117 (516)
T ss_pred             hhcCCcHHHHHHH
Confidence            9999999999874

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.21  E-value=3.3e-11  Score=109.25  Aligned_cols=93  Identities=29%  Similarity=0.403  Sum_probs=79.1

Q ss_pred             ccCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCC--eeEEEE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGP--ESLLVY  344 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lv~  344 (363)
                      ..++...+.||+|+||.||++... +|...|||.+...+....+.+.+|+.+|.+++|||||+++|......  ..++.|
T Consensus        16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~m   95 (313)
T KOG0198|consen   16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFM   95 (313)
T ss_pred             cchhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeee
Confidence            345677889999999999999974 48999999998654333677999999999999999999999855544  689999


Q ss_pred             EccCCCChhHHhhcCC
Q 017984          345 EFVPNQSLLDNLFDKM  360 (363)
Q Consensus       345 Ey~~~gsL~~~l~~~~  360 (363)
                      ||+++|+|.+++.+..
T Consensus        96 Ey~~~GsL~~~~~~~g  111 (313)
T KOG0198|consen   96 EYAPGGSLSDLIKRYG  111 (313)
T ss_pred             eccCCCcHHHHHHHcC
Confidence            9999999999998764

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.21  E-value=4.8e-11  Score=106.86  Aligned_cols=92  Identities=30%  Similarity=0.411  Sum_probs=81.1

Q ss_pred             hccCCCcCceecccCceEEEEEEcCCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEc
Q 017984          267 ATNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       267 ~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      ..++|...+.||+|+||.||++...+++.++||.+.... ...+++.+|+.++++++|+||+++++++......++||||
T Consensus         4 ~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   82 (261)
T cd05034           4 PRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEY   82 (261)
T ss_pred             chhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEec
Confidence            456788899999999999999998777889999987543 2346799999999999999999999999988899999999


Q ss_pred             cCCCChhHHhhcC
Q 017984          347 VPNQSLLDNLFDK  359 (363)
Q Consensus       347 ~~~gsL~~~l~~~  359 (363)
                      +++++|.+++.++
T Consensus        83 ~~~~~L~~~i~~~   95 (261)
T cd05034          83 MSKGSLLDFLKSG   95 (261)
T ss_pred             cCCCCHHHHHhcc
Confidence            9999999999764

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.21  E-value=6e-11  Score=105.69  Aligned_cols=85  Identities=26%  Similarity=0.454  Sum_probs=74.5

Q ss_pred             ceecccCceEEEEEEc-CCCCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEccCCCCh
Q 017984          275 NKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQSL  352 (363)
Q Consensus       275 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~~~gsL  352 (363)
                      +.||+|+||.||++.. .+++.+|+|.+... .......|.+|++++++++||||+++++++......+|||||+++++|
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF   80 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence            3689999999999997 46889999988643 344456799999999999999999999999999999999999999999


Q ss_pred             hHHhhcC
Q 017984          353 LDNLFDK  359 (363)
Q Consensus       353 ~~~l~~~  359 (363)
                      .+++...
T Consensus        81 ~~~~~~~   87 (252)
T cd05084          81 LTFLRTE   87 (252)
T ss_pred             HHHHHhC
Confidence            9998653

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.21  E-value=8.4e-11  Score=109.39  Aligned_cols=86  Identities=23%  Similarity=0.267  Sum_probs=73.6

Q ss_pred             ceecccCceEEEEEEc-CCCCEEEEEEeccC---ChhhHHHHHHHHHHHhcC-CCCCccceeeEEEeCCeeEEEEEccCC
Q 017984          275 NKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN---TTQWVDHFFNEVNLISGI-NHKNLVKLLGCSITGPESLLVYEFVPN  349 (363)
Q Consensus       275 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~Ey~~~  349 (363)
                      +.||+|+||.||++.. .+++.||+|+++..   .......+..|..++..+ +||||+++++++...+..+|||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~   80 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG   80 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence            3689999999999986 45889999999753   233455688999999998 699999999999999999999999999


Q ss_pred             CChhHHhhcCC
Q 017984          350 QSLLDNLFDKM  360 (363)
Q Consensus       350 gsL~~~l~~~~  360 (363)
                      |+|.+++..+.
T Consensus        81 g~L~~~~~~~~   91 (329)
T cd05588          81 GDLMFHMQRQR   91 (329)
T ss_pred             CCHHHHHHHcC
Confidence            99999886543

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.21  E-value=5.5e-11  Score=107.02  Aligned_cols=91  Identities=25%  Similarity=0.363  Sum_probs=77.6

Q ss_pred             cCCCcCceecccCceEEEEEEcC-C---CCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTLP-G---GEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLV  343 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~~-~---g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  343 (363)
                      ++|...+.||+|+||.||++... +   +..+|+|.++.. .....+.|.+|+.++.+++||||+++++++..++..++|
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   83 (267)
T cd05066           4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV   83 (267)
T ss_pred             HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence            45778899999999999999852 2   337999998753 334456799999999999999999999999999999999


Q ss_pred             EEccCCCChhHHhhcC
Q 017984          344 YEFVPNQSLLDNLFDK  359 (363)
Q Consensus       344 ~Ey~~~gsL~~~l~~~  359 (363)
                      |||+++++|.+++..+
T Consensus        84 ~e~~~~~~L~~~~~~~   99 (267)
T cd05066          84 TEYMENGSLDAFLRKH   99 (267)
T ss_pred             EEcCCCCCHHHHHHhc
Confidence            9999999999998754

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.21  E-value=1.1e-10  Score=105.63  Aligned_cols=90  Identities=22%  Similarity=0.353  Sum_probs=78.2

Q ss_pred             CCcCceecccCceEEEEEEc-CCCCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEccC
Q 017984          271 FHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVP  348 (363)
Q Consensus       271 ~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~~  348 (363)
                      |...+.||+|+||.||++.. .+++.+|+|.+... .......|.+|+.++.+++||||+++++++..++..++||||++
T Consensus         6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~   85 (277)
T cd06641           6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLG   85 (277)
T ss_pred             hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCC
Confidence            56778899999999999986 46889999998643 23445679999999999999999999999999999999999999


Q ss_pred             CCChhHHhhcCC
Q 017984          349 NQSLLDNLFDKM  360 (363)
Q Consensus       349 ~gsL~~~l~~~~  360 (363)
                      +++|.+++....
T Consensus        86 ~~~l~~~i~~~~   97 (277)
T cd06641          86 GGSALDLLEPGP   97 (277)
T ss_pred             CCcHHHHHhcCC
Confidence            999999987544

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.21  E-value=5.8e-11  Score=107.83  Aligned_cols=90  Identities=27%  Similarity=0.390  Sum_probs=77.6

Q ss_pred             cCCCcCceecccCceEEEEEEc-----CCCCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL-----PGGEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLL  342 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~-----~~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  342 (363)
                      ++|+..+.||+|+||.||+|..     .++..+++|.+... .......|.+|+.++++++||||+++++++..+...++
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l   84 (283)
T cd05090           5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM   84 (283)
T ss_pred             hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence            4567788999999999999984     24678999999753 33445679999999999999999999999999999999


Q ss_pred             EEEccCCCChhHHhhc
Q 017984          343 VYEFVPNQSLLDNLFD  358 (363)
Q Consensus       343 v~Ey~~~gsL~~~l~~  358 (363)
                      ||||+++|+|.++|..
T Consensus        85 v~e~~~~~~L~~~l~~  100 (283)
T cd05090          85 LFEYLNQGDLHEFLIM  100 (283)
T ss_pred             EEEcCCCCcHHHHHHh
Confidence            9999999999999863

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.21  E-value=5.4e-11  Score=107.20  Aligned_cols=83  Identities=30%  Similarity=0.367  Sum_probs=71.6

Q ss_pred             eecccCceEEEEEEcCC---CCEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEccCCCC
Q 017984          276 KLGQGGSGSVYKGTLPG---GEAVAVKRLFYNT-TQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQS  351 (363)
Q Consensus       276 ~lg~G~~g~Vy~~~~~~---g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~~~gs  351 (363)
                      .||+|+||.||+|...+   +..+++|.++... ......|.+|+.++.+++||||+++++++.+....++||||+++|+
T Consensus         2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~   81 (269)
T cd05087           2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGD   81 (269)
T ss_pred             cccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCCc
Confidence            58999999999998533   4579999987543 3344579999999999999999999999999899999999999999


Q ss_pred             hhHHhhc
Q 017984          352 LLDNLFD  358 (363)
Q Consensus       352 L~~~l~~  358 (363)
                      |.++|..
T Consensus        82 L~~~l~~   88 (269)
T cd05087          82 LKGYLRS   88 (269)
T ss_pred             HHHHHHH
Confidence            9999875

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.21  E-value=4.3e-11  Score=107.13  Aligned_cols=89  Identities=27%  Similarity=0.381  Sum_probs=77.5

Q ss_pred             CCCcCceecccCceEEEEEEcCCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEccCC
Q 017984          270 YFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPN  349 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~~~  349 (363)
                      +|...+.||+|+||.||++...++..+|+|.+.... ....+|.+|+.++.+++||||+++++++......++||||+++
T Consensus         5 ~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   83 (256)
T cd05113           5 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSN   83 (256)
T ss_pred             HeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCC
Confidence            466778999999999999988767789999987543 2346799999999999999999999999988899999999999


Q ss_pred             CChhHHhhcC
Q 017984          350 QSLLDNLFDK  359 (363)
Q Consensus       350 gsL~~~l~~~  359 (363)
                      |+|.+++...
T Consensus        84 ~~l~~~i~~~   93 (256)
T cd05113          84 GCLLNYLREH   93 (256)
T ss_pred             CcHHHHHHhc
Confidence            9999998753

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.20  E-value=5.5e-11  Score=106.91  Aligned_cols=91  Identities=23%  Similarity=0.322  Sum_probs=79.6

Q ss_pred             cCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEcc
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFV  347 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~  347 (363)
                      ++|...+.||+|+||.||++.. .+++.+|+|.++.........+.+|+.++..++||||+++++.+...+..++||||+
T Consensus         9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~   88 (267)
T cd06645           9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFC   88 (267)
T ss_pred             HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Confidence            4566778899999999999986 458899999997665555567889999999999999999999999999999999999


Q ss_pred             CCCChhHHhhcC
Q 017984          348 PNQSLLDNLFDK  359 (363)
Q Consensus       348 ~~gsL~~~l~~~  359 (363)
                      ++++|.+++...
T Consensus        89 ~~~~L~~~~~~~  100 (267)
T cd06645          89 GGGSLQDIYHVT  100 (267)
T ss_pred             CCCcHHHHHHhc
Confidence            999999988654

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.20  E-value=8.4e-11  Score=105.53  Aligned_cols=90  Identities=24%  Similarity=0.365  Sum_probs=79.5

Q ss_pred             cCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVY  344 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  344 (363)
                      ++|...+.||+|+||.||++... +|+.+|+|.++..   .....+.+.+|++++++++|+||+++++.+...+..++||
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~   81 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL   81 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence            57888999999999999999975 7899999988632   3334667999999999999999999999999999999999


Q ss_pred             EccCCCChhHHhhc
Q 017984          345 EFVPNQSLLDNLFD  358 (363)
Q Consensus       345 Ey~~~gsL~~~l~~  358 (363)
                      ||+++|+|.+++.+
T Consensus        82 e~~~~~~L~~~l~~   95 (267)
T cd08224          82 ELADAGDLSRMIKH   95 (267)
T ss_pred             ecCCCCCHHHHHHH
Confidence            99999999998864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.20  E-value=9.9e-11  Score=108.69  Aligned_cols=86  Identities=23%  Similarity=0.181  Sum_probs=74.3

Q ss_pred             ceecccCceEEEEEEc-CCCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEccCCC
Q 017984          275 NKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQ  350 (363)
Q Consensus       275 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~~~g  350 (363)
                      +.||+|+||.||++.. .+|+.||+|++...   .......+.+|++++..++||||+++.+++...+..+|||||+++|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence            3689999999999985 46889999999743   2334567889999999999999999999999999999999999999


Q ss_pred             ChhHHhhcCC
Q 017984          351 SLLDNLFDKM  360 (363)
Q Consensus       351 sL~~~l~~~~  360 (363)
                      +|.+++..+.
T Consensus        81 ~L~~~l~~~~   90 (325)
T cd05594          81 ELFFHLSRER   90 (325)
T ss_pred             cHHHHHHhcC
Confidence            9999887554

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.20  E-value=4.1e-11  Score=109.20  Aligned_cols=92  Identities=28%  Similarity=0.412  Sum_probs=78.1

Q ss_pred             hccCCCcCceecccCceEEEEEEcC------CCCEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCe
Q 017984          267 ATNYFHESNKLGQGGSGSVYKGTLP------GGEAVAVKRLFYNT-TQWVDHFFNEVNLISGINHKNLVKLLGCSITGPE  339 (363)
Q Consensus       267 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  339 (363)
                      ..++|...+.||+|+||.||+|...      .+..||+|.+.... ......+.+|+.+++.++||||+++++++.....
T Consensus         4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   83 (288)
T cd05061           4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQP   83 (288)
T ss_pred             cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence            4567888999999999999998742      24589999886442 3334568999999999999999999999999999


Q ss_pred             eEEEEEccCCCChhHHhhc
Q 017984          340 SLLVYEFVPNQSLLDNLFD  358 (363)
Q Consensus       340 ~~lv~Ey~~~gsL~~~l~~  358 (363)
                      .++||||+++|+|.+++.+
T Consensus        84 ~~lv~e~~~~g~L~~~l~~  102 (288)
T cd05061          84 TLVVMELMAHGDLKSYLRS  102 (288)
T ss_pred             cEEEEeCCCCCCHHHHHHH
Confidence            9999999999999999964

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.20  E-value=9.2e-11  Score=106.97  Aligned_cols=92  Identities=29%  Similarity=0.375  Sum_probs=79.6

Q ss_pred             cCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVY  344 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  344 (363)
                      ++|...+.||+|+||.||++... +++.+|+|.+...   .....+.+.+|++++++++||||+++++.+..++..++||
T Consensus         1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   80 (290)
T cd05580           1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM   80 (290)
T ss_pred             CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence            35778899999999999999964 5889999998643   2234567899999999999999999999999999999999


Q ss_pred             EccCCCChhHHhhcCC
Q 017984          345 EFVPNQSLLDNLFDKM  360 (363)
Q Consensus       345 Ey~~~gsL~~~l~~~~  360 (363)
                      ||+++++|.+++....
T Consensus        81 e~~~~~~L~~~~~~~~   96 (290)
T cd05580          81 EYVPGGELFSHLRKSG   96 (290)
T ss_pred             ecCCCCCHHHHHHHcC
Confidence            9999999999987543

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.20  E-value=2.2e-11  Score=116.72  Aligned_cols=93  Identities=24%  Similarity=0.316  Sum_probs=81.2

Q ss_pred             cCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVY  344 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  344 (363)
                      +-|++++.||.|+-|.|-.++. .+|+.+|||++..+   .......+.+||-+|+-+.||||++|++++++..++|||+
T Consensus        12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvl   91 (786)
T KOG0588|consen   12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVL   91 (786)
T ss_pred             cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEE
Confidence            4578899999999999999986 67999999999765   2222446889999999999999999999999999999999


Q ss_pred             EccCCCChhHHhhcCCC
Q 017984          345 EFVPNQSLLDNLFDKML  361 (363)
Q Consensus       345 Ey~~~gsL~~~l~~~~~  361 (363)
                      ||+++|.|+++|..+..
T Consensus        92 Eyv~gGELFdylv~kG~  108 (786)
T KOG0588|consen   92 EYVPGGELFDYLVRKGP  108 (786)
T ss_pred             EecCCchhHHHHHhhCC
Confidence            99999999999986654

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.20  E-value=9.3e-11  Score=105.35  Aligned_cols=91  Identities=23%  Similarity=0.375  Sum_probs=78.5

Q ss_pred             CCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCC------hhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEE
Q 017984          270 YFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNT------TQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLL  342 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  342 (363)
                      +|+..+.||+|++|.||++.. .+++.+|+|.+....      ....+.+.+|+.++++++|+||+++++++...+..++
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~   80 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL   80 (268)
T ss_pred             CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence            467788999999999999985 568899999986432      1235679999999999999999999999999999999


Q ss_pred             EEEccCCCChhHHhhcCC
Q 017984          343 VYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       343 v~Ey~~~gsL~~~l~~~~  360 (363)
                      |+||+++++|.++|.+..
T Consensus        81 v~e~~~~~~L~~~l~~~~   98 (268)
T cd06630          81 FVEWMAGGSVSHLLSKYG   98 (268)
T ss_pred             EEeccCCCcHHHHHHHhC
Confidence            999999999999987543

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.20  E-value=8.8e-11  Score=120.05  Aligned_cols=90  Identities=19%  Similarity=0.325  Sum_probs=79.2

Q ss_pred             cCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVY  344 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  344 (363)
                      ++|...++||+|+||.||++... +|+.||+|++...   .....++|.+|++++.+++||||+++++++...+..++||
T Consensus         2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM   81 (932)
T PRK13184          2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM   81 (932)
T ss_pred             CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence            46888899999999999999964 5889999999753   2334567999999999999999999999999999999999


Q ss_pred             EccCCCChhHHhhc
Q 017984          345 EFVPNQSLLDNLFD  358 (363)
Q Consensus       345 Ey~~~gsL~~~l~~  358 (363)
                      ||+++|+|.++|..
T Consensus        82 EY~eGGSL~~lL~s   95 (932)
T PRK13184         82 PYIEGYTLKSLLKS   95 (932)
T ss_pred             EcCCCCCHHHHHHH
Confidence            99999999998863

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.20  E-value=7.2e-11  Score=115.45  Aligned_cols=88  Identities=16%  Similarity=0.207  Sum_probs=77.4

Q ss_pred             CCcCceecccCceEEEEEEc-CC-CCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEccC
Q 017984          271 FHESNKLGQGGSGSVYKGTL-PG-GEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVP  348 (363)
Q Consensus       271 ~~~~~~lg~G~~g~Vy~~~~-~~-g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~~  348 (363)
                      |...+.||+|+||.||++.. .+ ++.|++|.+..........+.+|+.++..++|||||++++++..++..+|||||++
T Consensus        69 y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~~  148 (478)
T PTZ00267         69 YVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGS  148 (478)
T ss_pred             EEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECCC
Confidence            77888999999999999985 33 67889998766655556678899999999999999999999999999999999999


Q ss_pred             CCChhHHhhc
Q 017984          349 NQSLLDNLFD  358 (363)
Q Consensus       349 ~gsL~~~l~~  358 (363)
                      +|+|.++|.+
T Consensus       149 gg~L~~~l~~  158 (478)
T PTZ00267        149 GGDLNKQIKQ  158 (478)
T ss_pred             CCCHHHHHHH
Confidence            9999988764

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.19  E-value=5.7e-11  Score=108.12  Aligned_cols=92  Identities=29%  Similarity=0.436  Sum_probs=79.8

Q ss_pred             ccCCCcCceecccCceEEEEEEcC------CCCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCee
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLP------GGEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPES  340 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  340 (363)
                      .++|...+.||+|+||.||++...      ++..+|+|.+... ......+|.+|+.++.+++||||+++++++..+...
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~   83 (288)
T cd05050           4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM   83 (288)
T ss_pred             hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence            466888899999999999999853      4678999998754 334456799999999999999999999999999999


Q ss_pred             EEEEEccCCCChhHHhhcC
Q 017984          341 LLVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       341 ~lv~Ey~~~gsL~~~l~~~  359 (363)
                      ++||||+++|+|.++|.+.
T Consensus        84 ~lv~e~~~~~~L~~~l~~~  102 (288)
T cd05050          84 CLLFEYMAYGDLNEFLRHR  102 (288)
T ss_pred             EEEEecCCCCCHHHHHHHc
Confidence            9999999999999999753

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.19  E-value=8.1e-11  Score=109.61  Aligned_cols=90  Identities=19%  Similarity=0.147  Sum_probs=77.7

Q ss_pred             cCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVY  344 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  344 (363)
                      ++|...++||+|+||.||++... +++.+|+|++...   .......|.+|+.++..++|+||+++++++...+..+|||
T Consensus         1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (332)
T cd05623           1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM   80 (332)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence            36788899999999999999974 4788999998642   2223445889999999999999999999999999999999


Q ss_pred             EccCCCChhHHhhc
Q 017984          345 EFVPNQSLLDNLFD  358 (363)
Q Consensus       345 Ey~~~gsL~~~l~~  358 (363)
                      ||+++|+|.++|.+
T Consensus        81 ey~~~g~L~~~l~~   94 (332)
T cd05623          81 DYYVGGDLLTLLSK   94 (332)
T ss_pred             eccCCCcHHHHHHH
Confidence            99999999999975

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.19  E-value=1.3e-10  Score=106.49  Aligned_cols=93  Identities=25%  Similarity=0.419  Sum_probs=81.5

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEc
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      ..+|...+.||+|++|.||++.. .+++.+++|.+........+.+.+|+.+++.++||||+++++.+..+...++||||
T Consensus        19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~   98 (296)
T cd06654          19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY   98 (296)
T ss_pred             ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecc
Confidence            34677888999999999999985 56889999999765555557799999999999999999999999999999999999


Q ss_pred             cCCCChhHHhhcCC
Q 017984          347 VPNQSLLDNLFDKM  360 (363)
Q Consensus       347 ~~~gsL~~~l~~~~  360 (363)
                      +++++|.+++.+..
T Consensus        99 ~~~~~L~~~~~~~~  112 (296)
T cd06654          99 LAGGSLTDVVTETC  112 (296)
T ss_pred             cCCCCHHHHHHhcC
Confidence            99999999987543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.19  E-value=1.1e-10  Score=104.06  Aligned_cols=90  Identities=18%  Similarity=0.259  Sum_probs=79.1

Q ss_pred             CCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEc
Q 017984          270 YFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      +|...+.||+|++|.||++.. .+++.+++|.+...  .......+.+|++++++++||||+++++++...+..++||||
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08529           1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY   80 (256)
T ss_pred             CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence            366778999999999999996 46889999998643  345567899999999999999999999999999999999999


Q ss_pred             cCCCChhHHhhcC
Q 017984          347 VPNQSLLDNLFDK  359 (363)
Q Consensus       347 ~~~gsL~~~l~~~  359 (363)
                      +++++|.++|...
T Consensus        81 ~~~~~L~~~l~~~   93 (256)
T cd08529          81 AENGDLHKLLKMQ   93 (256)
T ss_pred             CCCCcHHHHHHHh
Confidence            9999999998764

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.19  E-value=4.3e-11  Score=112.03  Aligned_cols=93  Identities=26%  Similarity=0.350  Sum_probs=77.0

Q ss_pred             hccCCCcCceecccCceEEEEEEc------CCCCEEEEEEeccCC-hhhHHHHHHHHHHHhcC-CCCCccceeeEEEe-C
Q 017984          267 ATNYFHESNKLGQGGSGSVYKGTL------PGGEAVAVKRLFYNT-TQWVDHFFNEVNLISGI-NHKNLVKLLGCSIT-G  337 (363)
Q Consensus       267 ~~~~~~~~~~lg~G~~g~Vy~~~~------~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~-~  337 (363)
                      +.++|...+.||+|+||.||++..      .+++.||||+++... ......+.+|+.++.++ +||||+++++++.. +
T Consensus         5 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~   84 (343)
T cd05103           5 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG   84 (343)
T ss_pred             chhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCC
Confidence            345788999999999999999973      346789999997542 33456789999999999 68999999998765 4


Q ss_pred             CeeEEEEEccCCCChhHHhhcC
Q 017984          338 PESLLVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       338 ~~~~lv~Ey~~~gsL~~~l~~~  359 (363)
                      ...++||||+++|+|.++|...
T Consensus        85 ~~~~lv~ey~~~g~L~~~i~~~  106 (343)
T cd05103          85 GPLMVIVEFCKFGNLSNYLRSK  106 (343)
T ss_pred             CceEEEEeccCCCcHHHHHHhc
Confidence            5688999999999999999753

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.19  E-value=5.1e-11  Score=107.84  Aligned_cols=92  Identities=28%  Similarity=0.405  Sum_probs=78.7

Q ss_pred             hccCCCcCceecccCceEEEEEEcC------CCCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCe
Q 017984          267 ATNYFHESNKLGQGGSGSVYKGTLP------GGEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPE  339 (363)
Q Consensus       267 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  339 (363)
                      .+++|...+.||+|+||.||++...      .+..||+|.+... ......+|.+|+.++..++||||+++++++..+..
T Consensus         4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~   83 (277)
T cd05062           4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP   83 (277)
T ss_pred             cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence            4567889999999999999998742      2567999998643 23345679999999999999999999999999999


Q ss_pred             eEEEEEccCCCChhHHhhc
Q 017984          340 SLLVYEFVPNQSLLDNLFD  358 (363)
Q Consensus       340 ~~lv~Ey~~~gsL~~~l~~  358 (363)
                      .++||||+++|+|.+++.+
T Consensus        84 ~~lv~e~~~~~~L~~~~~~  102 (277)
T cd05062          84 TLVIMELMTRGDLKSYLRS  102 (277)
T ss_pred             eEEEEecCCCCCHHHHHHH
Confidence            9999999999999999865

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.19  E-value=9.5e-11  Score=108.76  Aligned_cols=91  Identities=24%  Similarity=0.349  Sum_probs=74.2

Q ss_pred             CCcCceecccCceEEEEEEc-CCCCEEEEEEeccC---ChhhHHHHHHHHHHH---hcCCCCCccceeeEEEeCCeeEEE
Q 017984          271 FHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN---TTQWVDHFFNEVNLI---SGINHKNLVKLLGCSITGPESLLV  343 (363)
Q Consensus       271 ~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l---~~l~h~niv~l~~~~~~~~~~~lv  343 (363)
                      |...+.||+|+||.||++.. .+++.||||+++..   .....+.+.+|++++   ..++||||+++++++...+..+||
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv   80 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV   80 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence            45678899999999999986 46899999999743   223345577776655   567899999999999999999999


Q ss_pred             EEccCCCChhHHhhcCCC
Q 017984          344 YEFVPNQSLLDNLFDKML  361 (363)
Q Consensus       344 ~Ey~~~gsL~~~l~~~~~  361 (363)
                      |||+++|+|..++....+
T Consensus        81 ~E~~~~~~L~~~~~~~~l   98 (324)
T cd05589          81 MEYAAGGDLMMHIHTDVF   98 (324)
T ss_pred             EcCCCCCcHHHHhhcCCC
Confidence            999999999998876543

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.19  E-value=1.8e-11  Score=116.15  Aligned_cols=98  Identities=28%  Similarity=0.451  Sum_probs=84.4

Q ss_pred             chHHHHHhccCCCcCceecccCceEEEEEEcCCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeC
Q 017984          260 SYETLEKATNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITG  337 (363)
Q Consensus       260 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~  337 (363)
                      +.+++....+.+.+...||+|+||+||+|.+..  .||||.+...  ..+..+.|++|+.++++-+|.||+-+.|++..+
T Consensus       383 s~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p  460 (678)
T KOG0193|consen  383 SLEEWEIPPEEVLLGERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNP  460 (678)
T ss_pred             cccccccCHHHhhccceeccccccceeeccccc--ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCC
Confidence            345666666677788999999999999999873  4999999754  456678999999999999999999999999988


Q ss_pred             CeeEEEEEccCCCChhHHhhcCC
Q 017984          338 PESLLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       338 ~~~~lv~Ey~~~gsL~~~l~~~~  360 (363)
                      .. .||+.||+|.+|..+|+..+
T Consensus       461 ~~-AIiTqwCeGsSLY~hlHv~e  482 (678)
T KOG0193|consen  461 PL-AIITQWCEGSSLYTHLHVQE  482 (678)
T ss_pred             ce-eeeehhccCchhhhhccchh
Confidence            77 89999999999999998643

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.19  E-value=1.4e-10  Score=105.05  Aligned_cols=91  Identities=22%  Similarity=0.377  Sum_probs=79.3

Q ss_pred             CCCcCceecccCceEEEEEEcC-CCCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEcc
Q 017984          270 YFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFV  347 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~  347 (363)
                      .|+..+.||+|+||.||++... +++.||+|.+... .......+.+|+.++..+.||||+++++++..+...++||||+
T Consensus         5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (277)
T cd06640           5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYL   84 (277)
T ss_pred             hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecC
Confidence            3566778999999999999964 5889999998754 3445677999999999999999999999999999999999999


Q ss_pred             CCCChhHHhhcCC
Q 017984          348 PNQSLLDNLFDKM  360 (363)
Q Consensus       348 ~~gsL~~~l~~~~  360 (363)
                      ++|+|.+++...+
T Consensus        85 ~~~~L~~~i~~~~   97 (277)
T cd06640          85 GGGSALDLLRAGP   97 (277)
T ss_pred             CCCcHHHHHhcCC
Confidence            9999999987654

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.18  E-value=8.4e-11  Score=107.11  Aligned_cols=91  Identities=24%  Similarity=0.401  Sum_probs=79.4

Q ss_pred             cCCCcCceecccCceEEEEEEc------CCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL------PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLL  342 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~------~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  342 (363)
                      ++|...+.||+|+||.||++..      .++..+|+|.+........+.|.+|++++.+++||||+++++++...+..++
T Consensus         5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (288)
T cd05093           5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM   84 (288)
T ss_pred             HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence            4677889999999999999974      2345689999876665666789999999999999999999999999999999


Q ss_pred             EEEccCCCChhHHhhcC
Q 017984          343 VYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       343 v~Ey~~~gsL~~~l~~~  359 (363)
                      ||||+++++|.++|...
T Consensus        85 v~e~~~~~~L~~~i~~~  101 (288)
T cd05093          85 VFEYMKHGDLNKFLRAH  101 (288)
T ss_pred             EEEcCCCCCHHHHHHHc
Confidence            99999999999998754

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.18  E-value=7.3e-11  Score=105.71  Aligned_cols=91  Identities=30%  Similarity=0.423  Sum_probs=78.0

Q ss_pred             hccCCCcCceecccCceEEEEEEcCCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEc
Q 017984          267 ATNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       267 ~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      ..+.|+..++||+|+||.||++...+++.+|+|.+..... ....|.+|+.++++++|+||+++++++ ..+..+++|||
T Consensus         4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~~v~e~   81 (260)
T cd05067           4 PRETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM-SPEAFLAEANLMKQLQHPRLVRLYAVV-TQEPIYIITEY   81 (260)
T ss_pred             chHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCC-cHHHHHHHHHHHHhcCCcCeeeEEEEE-ccCCcEEEEEc
Confidence            3456888899999999999999988889999999975433 345799999999999999999999876 45678999999


Q ss_pred             cCCCChhHHhhcC
Q 017984          347 VPNQSLLDNLFDK  359 (363)
Q Consensus       347 ~~~gsL~~~l~~~  359 (363)
                      +++|+|.+++...
T Consensus        82 ~~~~~L~~~~~~~   94 (260)
T cd05067          82 MENGSLVDFLKTP   94 (260)
T ss_pred             CCCCCHHHHHHhc
Confidence            9999999998653

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.18  E-value=9.9e-11  Score=104.57  Aligned_cols=91  Identities=31%  Similarity=0.482  Sum_probs=80.1

Q ss_pred             ccCCCcCceecccCceEEEEEEcCCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEcc
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFV  347 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~  347 (363)
                      .++|+..+.||+|+||.||++... |+.||+|.+..... ..+++.+|+.++.+++|+||+++++++......++||||+
T Consensus         5 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   82 (256)
T cd05039           5 SKELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYM   82 (256)
T ss_pred             hhhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEec
Confidence            346778899999999999999875 78899999976544 4677999999999999999999999999889999999999


Q ss_pred             CCCChhHHhhcCC
Q 017984          348 PNQSLLDNLFDKM  360 (363)
Q Consensus       348 ~~gsL~~~l~~~~  360 (363)
                      ++++|.+++....
T Consensus        83 ~~~~L~~~~~~~~   95 (256)
T cd05039          83 AKGSLVDYLRSRG   95 (256)
T ss_pred             CCCcHHHHHHhcC
Confidence            9999999987543

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.18  E-value=1.3e-10  Score=106.05  Aligned_cols=91  Identities=23%  Similarity=0.398  Sum_probs=81.3

Q ss_pred             ccCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEc
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      .+.|...+.||+|+||.||++... +++.+++|.+........+.+.+|+.+++.++||||+++++.+..+...++||||
T Consensus        11 ~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   90 (292)
T cd06644          11 NEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEF   90 (292)
T ss_pred             chhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEec
Confidence            456778889999999999999964 5889999999877666677899999999999999999999999999999999999


Q ss_pred             cCCCChhHHhhc
Q 017984          347 VPNQSLLDNLFD  358 (363)
Q Consensus       347 ~~~gsL~~~l~~  358 (363)
                      +++++|..++.+
T Consensus        91 ~~~~~l~~~~~~  102 (292)
T cd06644          91 CPGGAVDAIMLE  102 (292)
T ss_pred             CCCCcHHHHHHh
Confidence            999999887754

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.18  E-value=1.1e-10  Score=106.79  Aligned_cols=93  Identities=27%  Similarity=0.438  Sum_probs=81.3

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEc
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      .++|...+.||+|+||.||++.. .++..+++|.+........+.+.+|+.++++++||||+++++.+...+..++|+||
T Consensus        18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~   97 (293)
T cd06647          18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEY   97 (293)
T ss_pred             hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEec
Confidence            35678889999999999999985 46789999998755444557799999999999999999999999999999999999


Q ss_pred             cCCCChhHHhhcCC
Q 017984          347 VPNQSLLDNLFDKM  360 (363)
Q Consensus       347 ~~~gsL~~~l~~~~  360 (363)
                      +++++|.+++.+..
T Consensus        98 ~~~~~L~~~~~~~~  111 (293)
T cd06647          98 LAGGSLTDVVTETC  111 (293)
T ss_pred             CCCCcHHHHHhhcC
Confidence            99999999987654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.18  E-value=9.2e-11  Score=106.68  Aligned_cols=89  Identities=22%  Similarity=0.268  Sum_probs=75.5

Q ss_pred             cCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYE  345 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  345 (363)
                      ++|...+.||+|+||.||++... +++.+|+|++...  .....+.+.+|+.++..++||||+++++++...+..++|||
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (287)
T cd07848           1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE   80 (287)
T ss_pred             CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence            35788899999999999999974 5789999999753  23335668899999999999999999999999999999999


Q ss_pred             ccCCCChhHHhh
Q 017984          346 FVPNQSLLDNLF  357 (363)
Q Consensus       346 y~~~gsL~~~l~  357 (363)
                      |++++.|..+..
T Consensus        81 ~~~~~~l~~~~~   92 (287)
T cd07848          81 YVEKNMLELLEE   92 (287)
T ss_pred             cCCCCHHHHHHh
Confidence            999877765543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.18  E-value=1.5e-10  Score=106.50  Aligned_cols=92  Identities=16%  Similarity=0.184  Sum_probs=79.4

Q ss_pred             cCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYNT---TQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVY  344 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  344 (363)
                      ++|...+.||+|+||.||++... +++.|++|.+....   ......+.+|+.++..++||||+++++.+..++..++||
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (305)
T cd05609           1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM   80 (305)
T ss_pred             CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence            36788899999999999999964 57899999987542   233567889999999999999999999999999999999


Q ss_pred             EccCCCChhHHhhcCC
Q 017984          345 EFVPNQSLLDNLFDKM  360 (363)
Q Consensus       345 Ey~~~gsL~~~l~~~~  360 (363)
                      ||+++++|.++|....
T Consensus        81 e~~~g~~L~~~l~~~~   96 (305)
T cd05609          81 EYVEGGDCATLLKNIG   96 (305)
T ss_pred             ecCCCCcHHHHHHHcC
Confidence            9999999999986543

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.18  E-value=1.6e-10  Score=103.90  Aligned_cols=89  Identities=25%  Similarity=0.357  Sum_probs=78.0

Q ss_pred             cCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVY  344 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  344 (363)
                      ++|...+.||+|+||.||++.. .+++.||||.+...   .......|.+|+++++.++||||+++++++...+..++|+
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL   81 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence            4688899999999999999996 46889999988642   3344567899999999999999999999999999999999


Q ss_pred             EccCCCChhHHhh
Q 017984          345 EFVPNQSLLDNLF  357 (363)
Q Consensus       345 Ey~~~gsL~~~l~  357 (363)
                      ||+++|+|.+++.
T Consensus        82 e~~~~~~L~~~~~   94 (267)
T cd08228          82 ELADAGDLSQMIK   94 (267)
T ss_pred             EecCCCcHHHHHH
Confidence            9999999998875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.18  E-value=1.6e-10  Score=107.48  Aligned_cols=86  Identities=22%  Similarity=0.251  Sum_probs=73.1

Q ss_pred             ceecccCceEEEEEEc-CCCCEEEEEEeccC---ChhhHHHHHHHHHHHhcC-CCCCccceeeEEEeCCeeEEEEEccCC
Q 017984          275 NKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN---TTQWVDHFFNEVNLISGI-NHKNLVKLLGCSITGPESLLVYEFVPN  349 (363)
Q Consensus       275 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~Ey~~~  349 (363)
                      +.||+|+||.||++.. .+++.+|+|+++..   .......+.+|+.++.++ +||||+++++++...+..+|||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~   80 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG   80 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence            4699999999999996 45789999999753   334455688999988877 799999999999999999999999999


Q ss_pred             CChhHHhhcCC
Q 017984          350 QSLLDNLFDKM  360 (363)
Q Consensus       350 gsL~~~l~~~~  360 (363)
                      |+|..++....
T Consensus        81 ~~L~~~~~~~~   91 (329)
T cd05618          81 GDLMFHMQRQR   91 (329)
T ss_pred             CCHHHHHHHcC
Confidence            99998886543

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.18  E-value=7.1e-11  Score=107.98  Aligned_cols=92  Identities=26%  Similarity=0.395  Sum_probs=77.6

Q ss_pred             ccCCCcCceecccCceEEEEEEcCC---------------CCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCcccee
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLPG---------------GEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLL  331 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~~---------------g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~  331 (363)
                      .++|...+.||+|+||.||++....               ...||+|.+... .......|.+|++++.+++||||++++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~   83 (295)
T cd05097           4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLL   83 (295)
T ss_pred             hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence            3567888999999999999987532               235899998754 344456799999999999999999999


Q ss_pred             eEEEeCCeeEEEEEccCCCChhHHhhcC
Q 017984          332 GCSITGPESLLVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       332 ~~~~~~~~~~lv~Ey~~~gsL~~~l~~~  359 (363)
                      +++...+..++||||+++++|.+++...
T Consensus        84 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~  111 (295)
T cd05097          84 GVCVSDDPLCMITEYMENGDLNQFLSQR  111 (295)
T ss_pred             EEEcCCCccEEEEecCCCCcHHHHHHhc
Confidence            9999999999999999999999998653

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.17  E-value=1.3e-10  Score=107.86  Aligned_cols=86  Identities=26%  Similarity=0.305  Sum_probs=74.1

Q ss_pred             cCceeccc--CceEEEEEEc-CCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEcc
Q 017984          273 ESNKLGQG--GSGSVYKGTL-PGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFV  347 (363)
Q Consensus       273 ~~~~lg~G--~~g~Vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~  347 (363)
                      ..++||+|  +|+.||++.. .+|+.||+|++...  .....+.+.+|+.+++.++||||+++++++..++..++||||+
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~   81 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM   81 (327)
T ss_pred             hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence            35689999  7889999986 56899999999753  2334456788999999999999999999999999999999999


Q ss_pred             CCCChhHHhhc
Q 017984          348 PNQSLLDNLFD  358 (363)
Q Consensus       348 ~~gsL~~~l~~  358 (363)
                      ++|+|.+++..
T Consensus        82 ~~~~l~~~~~~   92 (327)
T cd08227          82 AYGSAKDLICT   92 (327)
T ss_pred             CCCcHHHHHHh
Confidence            99999999864

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.17  E-value=8.3e-11  Score=105.90  Aligned_cols=90  Identities=26%  Similarity=0.395  Sum_probs=77.5

Q ss_pred             CCCcCceecccCceEEEEEEcC-CC---CEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEE
Q 017984          270 YFHESNKLGQGGSGSVYKGTLP-GG---EAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVY  344 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~~~-~g---~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  344 (363)
                      +|...+.||+|+||.||++... ++   ..||+|.+... ......+|.+|+.++++++||||+++++++..+...++||
T Consensus         5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~   84 (269)
T cd05065           5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIIT   84 (269)
T ss_pred             HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEE
Confidence            4677889999999999999863 23   36999998754 4445678999999999999999999999999999999999


Q ss_pred             EccCCCChhHHhhcC
Q 017984          345 EFVPNQSLLDNLFDK  359 (363)
Q Consensus       345 Ey~~~gsL~~~l~~~  359 (363)
                      ||+++|+|.+++...
T Consensus        85 e~~~~~~L~~~l~~~   99 (269)
T cd05065          85 EFMENGALDSFLRQN   99 (269)
T ss_pred             ecCCCCcHHHHHhhC
Confidence            999999999998753

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.17  E-value=1.2e-11  Score=119.04  Aligned_cols=87  Identities=32%  Similarity=0.527  Sum_probs=75.8

Q ss_pred             CCcCceecccCceEEEEEEcC--CCC--EEEEEEeccCCh-hhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEE
Q 017984          271 FHESNKLGQGGSGSVYKGTLP--GGE--AVAVKRLFYNTT-QWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYE  345 (363)
Q Consensus       271 ~~~~~~lg~G~~g~Vy~~~~~--~g~--~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  345 (363)
                      +...++||+|.||.|++|.|.  +|+  .||||.++.... .....|++|+.+|.+|+|||+++|+|+..+ ..+.||+|
T Consensus       112 i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~E  190 (1039)
T KOG0199|consen  112 IKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFE  190 (1039)
T ss_pred             HHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhh
Confidence            446778999999999999973  354  689999986533 367889999999999999999999999988 67889999


Q ss_pred             ccCCCChhHHhhc
Q 017984          346 FVPNQSLLDNLFD  358 (363)
Q Consensus       346 y~~~gsL~~~l~~  358 (363)
                      .++.|+|.+.|++
T Consensus       191 LaplGSLldrLrk  203 (1039)
T KOG0199|consen  191 LAPLGSLLDRLRK  203 (1039)
T ss_pred             hcccchHHHHHhh
Confidence            9999999999987

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.17  E-value=1.4e-10  Score=105.80  Aligned_cols=90  Identities=26%  Similarity=0.328  Sum_probs=76.6

Q ss_pred             cCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEc
Q 017984          269 NYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYNT-TQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      ++|...+.||+|+||.||++... +++.||+|.++... ......+.+|+.++++++||||+++++++..++..++||||
T Consensus         5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   84 (288)
T cd07871           5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY   84 (288)
T ss_pred             ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence            46788899999999999999864 68899999997432 23345688999999999999999999999999999999999


Q ss_pred             cCCCChhHHhhcC
Q 017984          347 VPNQSLLDNLFDK  359 (363)
Q Consensus       347 ~~~gsL~~~l~~~  359 (363)
                      +++ +|.+++...
T Consensus        85 ~~~-~l~~~l~~~   96 (288)
T cd07871          85 LDS-DLKQYLDNC   96 (288)
T ss_pred             CCc-CHHHHHHhc
Confidence            975 999988643

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.17  E-value=7.5e-11  Score=107.20  Aligned_cols=90  Identities=19%  Similarity=0.257  Sum_probs=79.0

Q ss_pred             CCCcCceecccCceEEEEEEcC-CCCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEcc
Q 017984          270 YFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFV  347 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~  347 (363)
                      +|+..+.||+|+||.||++... ++..+|+|.+... .......+.+|+.++.+++||||+++++.+...+..++||||+
T Consensus         2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~   81 (286)
T cd06622           2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYM   81 (286)
T ss_pred             hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeec
Confidence            5677889999999999999974 6899999998753 3344567999999999999999999999999999999999999


Q ss_pred             CCCChhHHhhcC
Q 017984          348 PNQSLLDNLFDK  359 (363)
Q Consensus       348 ~~gsL~~~l~~~  359 (363)
                      ++++|.+++...
T Consensus        82 ~~~~l~~~~~~~   93 (286)
T cd06622          82 DAGSLDKLYAGG   93 (286)
T ss_pred             CCCCHHHHHHhc
Confidence            999999988763

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.17  E-value=1.7e-10  Score=103.26  Aligned_cols=92  Identities=23%  Similarity=0.338  Sum_probs=82.1

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEc
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      .++|...+.||+|+||.||++.. .+++.+++|.+........+.+.+|+.++.+++||||+++++.+.....++++|||
T Consensus         2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~   81 (262)
T cd06613           2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEY   81 (262)
T ss_pred             ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeC
Confidence            46788889999999999999986 45788999999866555667899999999999999999999999999999999999


Q ss_pred             cCCCChhHHhhcC
Q 017984          347 VPNQSLLDNLFDK  359 (363)
Q Consensus       347 ~~~gsL~~~l~~~  359 (363)
                      +++++|.+++..+
T Consensus        82 ~~~~~l~~~~~~~   94 (262)
T cd06613          82 CGGGSLQDIYQVT   94 (262)
T ss_pred             CCCCcHHHHHHhh
Confidence            9999999988764

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.17  E-value=2.1e-10  Score=102.78  Aligned_cols=91  Identities=25%  Similarity=0.430  Sum_probs=78.9

Q ss_pred             cCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCC-----hhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNT-----TQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLL  342 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  342 (363)
                      ++|...+.||+|++|.||++.. .+++.+++|.+....     ......+.+|++++.+++||||+++++++..++..++
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~   81 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI   81 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence            4688999999999999999986 468899999986431     2234568999999999999999999999999999999


Q ss_pred             EEEccCCCChhHHhhcC
Q 017984          343 VYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       343 v~Ey~~~gsL~~~l~~~  359 (363)
                      |+||+++++|.+++...
T Consensus        82 v~e~~~~~~l~~~~~~~   98 (263)
T cd06625          82 FMEYMPGGSVKDQLKAY   98 (263)
T ss_pred             EEEECCCCcHHHHHHHh
Confidence            99999999999988654

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.17  E-value=1e-10  Score=107.14  Aligned_cols=93  Identities=25%  Similarity=0.449  Sum_probs=81.8

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEc
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      ..+|...+.||.|++|.||++.. .+++.|++|.+........+.+.+|+.+++.++||||+++++.+...+..++|+||
T Consensus        18 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   97 (296)
T cd06655          18 KKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEY   97 (296)
T ss_pred             cceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEe
Confidence            34578888999999999999985 56899999999765545567789999999999999999999999999999999999


Q ss_pred             cCCCChhHHhhcCC
Q 017984          347 VPNQSLLDNLFDKM  360 (363)
Q Consensus       347 ~~~gsL~~~l~~~~  360 (363)
                      +++++|.+++.+..
T Consensus        98 ~~~~~L~~~~~~~~  111 (296)
T cd06655          98 LAGGSLTDVVTETC  111 (296)
T ss_pred             cCCCcHHHHHHhcC
Confidence            99999999887654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.17  E-value=9.6e-11  Score=105.80  Aligned_cols=92  Identities=25%  Similarity=0.376  Sum_probs=78.8

Q ss_pred             cCCCcCceecccCceEEEEEEcC------CCCEEEEEEeccCChh-hHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTLP------GGEAVAVKRLFYNTTQ-WVDHFFNEVNLISGINHKNLVKLLGCSITGPESL  341 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  341 (363)
                      ++|.....||+|+||.||++...      +.+.+++|.+...... ..++|.+|++++++++||||+++++++......+
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   84 (275)
T cd05046           5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY   84 (275)
T ss_pred             HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence            56778889999999999999853      2457999988754433 4567999999999999999999999999888999


Q ss_pred             EEEEccCCCChhHHhhcCC
Q 017984          342 LVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       342 lv~Ey~~~gsL~~~l~~~~  360 (363)
                      +||||+++|+|.++|....
T Consensus        85 lv~e~~~~~~L~~~i~~~~  103 (275)
T cd05046          85 MILEYTDLGDLKQFLRATK  103 (275)
T ss_pred             EEEEecCCCcHHHHHHhcc
Confidence            9999999999999997544

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.17  E-value=1.1e-10  Score=106.81  Aligned_cols=93  Identities=25%  Similarity=0.314  Sum_probs=78.7

Q ss_pred             ccCCCcCceecccCceEEEEEEcC-----------------CCCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccc
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLP-----------------GGEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVK  329 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~-----------------~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~  329 (363)
                      .++|...+.||+|+||.||++...                 ++..+|+|.+... .......|.+|+.++.+++|+||++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~   83 (296)
T cd05095           4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIR   83 (296)
T ss_pred             hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcce
Confidence            456888999999999999997532                 2346899999754 3444567999999999999999999


Q ss_pred             eeeEEEeCCeeEEEEEccCCCChhHHhhcCC
Q 017984          330 LLGCSITGPESLLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       330 l~~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~  360 (363)
                      +++++...+..++||||+++|+|.+++.+..
T Consensus        84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~  114 (296)
T cd05095          84 LLAVCITSDPLCMITEYMENGDLNQFLSRHE  114 (296)
T ss_pred             EEEEEecCCccEEEEEeCCCCcHHHHHHhcC
Confidence            9999999999999999999999999987643

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.16  E-value=1.1e-10  Score=104.31  Aligned_cols=89  Identities=28%  Similarity=0.399  Sum_probs=77.3

Q ss_pred             CCCcCceecccCceEEEEEEcCCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEccCC
Q 017984          270 YFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPN  349 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~~~  349 (363)
                      +|...+.||+|+||.||++...++..+|+|.+..... ....|.+|+.++.+++||||+++++++...+..++||||+++
T Consensus         5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~   83 (256)
T cd05059           5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAM-SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMAN   83 (256)
T ss_pred             HcchhhhhccCCCceEEEeEecCCccEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCC
Confidence            4667889999999999999987777899999864322 235688999999999999999999999999999999999999


Q ss_pred             CChhHHhhcC
Q 017984          350 QSLLDNLFDK  359 (363)
Q Consensus       350 gsL~~~l~~~  359 (363)
                      ++|.+++..+
T Consensus        84 ~~L~~~l~~~   93 (256)
T cd05059          84 GCLLNYLRER   93 (256)
T ss_pred             CCHHHHHHhc
Confidence            9999998753

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.16  E-value=1.8e-10  Score=105.77  Aligned_cols=91  Identities=27%  Similarity=0.391  Sum_probs=77.1

Q ss_pred             ccCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYNT-TQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYE  345 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  345 (363)
                      .++|...+.||+|+||.||++... +++.||+|++.... ......+.+|+.+++.++||||+++++++..+...++|||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   83 (303)
T cd07869           4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE   83 (303)
T ss_pred             cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence            467888999999999999999964 68899999997542 2223457899999999999999999999999999999999


Q ss_pred             ccCCCChhHHhhcC
Q 017984          346 FVPNQSLLDNLFDK  359 (363)
Q Consensus       346 y~~~gsL~~~l~~~  359 (363)
                      |++ ++|.+++..+
T Consensus        84 ~~~-~~l~~~~~~~   96 (303)
T cd07869          84 YVH-TDLCQYMDKH   96 (303)
T ss_pred             CCC-cCHHHHHHhC
Confidence            996 5888887654

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.16  E-value=2.1e-10  Score=102.32  Aligned_cols=90  Identities=17%  Similarity=0.230  Sum_probs=78.8

Q ss_pred             CCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEc
Q 017984          270 YFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      +|+..+.||+|+||.||.+.. .+++.+++|.+...  ......++.+|+.++++++|+||+++++++...+.++++|||
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~   80 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY   80 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence            467788999999999998885 55889999998653  344456799999999999999999999999999999999999


Q ss_pred             cCCCChhHHhhcC
Q 017984          347 VPNQSLLDNLFDK  359 (363)
Q Consensus       347 ~~~gsL~~~l~~~  359 (363)
                      +++|+|.+++...
T Consensus        81 ~~~~~L~~~~~~~   93 (256)
T cd08221          81 ANGGTLYDKIVRQ   93 (256)
T ss_pred             cCCCcHHHHHHhc
Confidence            9999999999764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.16  E-value=2.6e-10  Score=103.38  Aligned_cols=86  Identities=20%  Similarity=0.276  Sum_probs=75.2

Q ss_pred             CCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEcc
Q 017984          270 YFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFV  347 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~  347 (363)
                      +|+..++||+|+||.||++.. .+++.+|+|.+... ......+|.+|+.++.+++||||+++++.+...+..++||||+
T Consensus         2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   81 (279)
T cd06619           2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFM   81 (279)
T ss_pred             cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecC
Confidence            567788999999999999985 56889999998754 3344567999999999999999999999999999999999999


Q ss_pred             CCCChhHH
Q 017984          348 PNQSLLDN  355 (363)
Q Consensus       348 ~~gsL~~~  355 (363)
                      ++++|..+
T Consensus        82 ~~~~l~~~   89 (279)
T cd06619          82 DGGSLDVY   89 (279)
T ss_pred             CCCChHHh
Confidence            99998754

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.16  E-value=2.8e-10  Score=101.56  Aligned_cols=89  Identities=16%  Similarity=0.209  Sum_probs=77.6

Q ss_pred             CCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEcc
Q 017984          270 YFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFV  347 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~  347 (363)
                      +|...+.||+|+||.||++.. .+++.+|+|.++.. .....+.+.+|+.++++++|+||+++++.+...+.+++||||+
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   80 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC   80 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence            366788999999999999986 46889999998643 3344567899999999999999999999999999999999999


Q ss_pred             CCCChhHHhhc
Q 017984          348 PNQSLLDNLFD  358 (363)
Q Consensus       348 ~~gsL~~~l~~  358 (363)
                      ++|+|.+++..
T Consensus        81 ~~~~l~~~~~~   91 (255)
T cd08219          81 DGGDLMQKIKL   91 (255)
T ss_pred             CCCcHHHHHHh
Confidence            99999998864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.16  E-value=1.4e-10  Score=104.37  Aligned_cols=85  Identities=32%  Similarity=0.362  Sum_probs=71.7

Q ss_pred             eecccCceEEEEEEcCC---CCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEccCCCC
Q 017984          276 KLGQGGSGSVYKGTLPG---GEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQS  351 (363)
Q Consensus       276 ~lg~G~~g~Vy~~~~~~---g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~~~gs  351 (363)
                      .||+|+||.||+|...+   ...+++|.+... .......|.+|+.+++.++||||+++++.+......+|||||+++|+
T Consensus         2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~   81 (269)
T cd05042           2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD   81 (269)
T ss_pred             cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence            58999999999997532   357888887643 33445678999999999999999999999999999999999999999


Q ss_pred             hhHHhhcCC
Q 017984          352 LLDNLFDKM  360 (363)
Q Consensus       352 L~~~l~~~~  360 (363)
                      |.++|....
T Consensus        82 L~~~l~~~~   90 (269)
T cd05042          82 LKNYLRSNR   90 (269)
T ss_pred             HHHHHHhcc
Confidence            999987643

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.16  E-value=7.5e-11  Score=106.72  Aligned_cols=90  Identities=23%  Similarity=0.397  Sum_probs=77.4

Q ss_pred             CCcCceecccCceEEEEEEc-CCCCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEccC
Q 017984          271 FHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVP  348 (363)
Q Consensus       271 ~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~~  348 (363)
                      |+..+.||+|+||.||+|.. .+++.||+|.+... .....+.+.+|+.++.+++||||+++++++..++..++||||++
T Consensus         6 y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   85 (277)
T cd06642           6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLG   85 (277)
T ss_pred             HHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccC
Confidence            45567899999999999986 45789999998744 33445679999999999999999999999999999999999999


Q ss_pred             CCChhHHhhcCC
Q 017984          349 NQSLLDNLFDKM  360 (363)
Q Consensus       349 ~gsL~~~l~~~~  360 (363)
                      +++|.+++..+.
T Consensus        86 ~~~L~~~~~~~~   97 (277)
T cd06642          86 GGSALDLLKPGP   97 (277)
T ss_pred             CCcHHHHhhcCC
Confidence            999999887544

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.16  E-value=1.4e-10  Score=105.27  Aligned_cols=81  Identities=21%  Similarity=0.281  Sum_probs=70.2

Q ss_pred             ecccCceEEEEEEc-CCCCEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEccCCCCh
Q 017984          277 LGQGGSGSVYKGTL-PGGEAVAVKRLFYNT---TQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQSL  352 (363)
Q Consensus       277 lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~~~gsL  352 (363)
                      ||+|+||.||++.. .+++.+|+|.+....   ....+.+..|+.+++.++||||+++.+++......++||||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L   80 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL   80 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence            68999999999986 468899999986432   22345678999999999999999999999999999999999999999


Q ss_pred             hHHhh
Q 017984          353 LDNLF  357 (363)
Q Consensus       353 ~~~l~  357 (363)
                      ..++.
T Consensus        81 ~~~~~   85 (280)
T cd05608          81 RYHIY   85 (280)
T ss_pred             HHHHH
Confidence            98874

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.16  E-value=1.6e-10  Score=104.21  Aligned_cols=90  Identities=27%  Similarity=0.382  Sum_probs=76.2

Q ss_pred             CCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCCh----------hhHHHHHHHHHHHhcCCCCCccceeeEEEeCC
Q 017984          270 YFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTT----------QWVDHFFNEVNLISGINHKNLVKLLGCSITGP  338 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~----------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~  338 (363)
                      +|...+.||+|+||.||+|.. .+|+.+|+|.++....          ...+.+.+|+.++..++||||+++++++...+
T Consensus         2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   81 (272)
T cd06629           2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE   81 (272)
T ss_pred             ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence            356788999999999999985 4688999998853211          11346889999999999999999999999999


Q ss_pred             eeEEEEEccCCCChhHHhhcC
Q 017984          339 ESLLVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       339 ~~~lv~Ey~~~gsL~~~l~~~  359 (363)
                      ..++||||+++|+|.+++.+.
T Consensus        82 ~~~lv~e~~~~~~L~~~l~~~  102 (272)
T cd06629          82 YLSIFLEYVPGGSIGSCLRTY  102 (272)
T ss_pred             ceEEEEecCCCCcHHHHHhhc
Confidence            999999999999999998764

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.16  E-value=2e-10  Score=103.69  Aligned_cols=91  Identities=22%  Similarity=0.325  Sum_probs=79.6

Q ss_pred             CCCcCceecccCceEEEEEEcC-CCCEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEcc
Q 017984          270 YFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYNT-TQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFV  347 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~  347 (363)
                      +|+..+.||.|++|.||++... +++.+++|.+.... ......+.+|+.+++.++|+||+++++++..+..+++|+||+
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   81 (274)
T cd06609           2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYC   81 (274)
T ss_pred             hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEee
Confidence            5677889999999999999964 58899999987542 344567899999999999999999999999999999999999


Q ss_pred             CCCChhHHhhcCC
Q 017984          348 PNQSLLDNLFDKM  360 (363)
Q Consensus       348 ~~gsL~~~l~~~~  360 (363)
                      ++++|.+++...+
T Consensus        82 ~~~~L~~~~~~~~   94 (274)
T cd06609          82 GGGSCLDLLKPGK   94 (274)
T ss_pred             CCCcHHHHHhhcC
Confidence            9999999987653

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.15  E-value=1.2e-10  Score=105.39  Aligned_cols=93  Identities=28%  Similarity=0.375  Sum_probs=79.6

Q ss_pred             ccCCCcCceecccCceEEEEEEcC------CCCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCee
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLP------GGEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPES  340 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  340 (363)
                      +++|...+.||+|++|.||++.+.      .+..|++|.+... .......|.+|+.+++.++|+||+++++++.+.+..
T Consensus         5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   84 (277)
T cd05036           5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPR   84 (277)
T ss_pred             HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCc
Confidence            466888999999999999999864      3568899988654 334456799999999999999999999999998899


Q ss_pred             EEEEEccCCCChhHHhhcCC
Q 017984          341 LLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       341 ~lv~Ey~~~gsL~~~l~~~~  360 (363)
                      ++||||+++++|.+++....
T Consensus        85 ~lv~e~~~g~~L~~~i~~~~  104 (277)
T cd05036          85 FILLELMAGGDLKSFLRENR  104 (277)
T ss_pred             EEEEecCCCCCHHHHHHHhC
Confidence            99999999999999987643

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.15  E-value=1.8e-10  Score=106.71  Aligned_cols=86  Identities=26%  Similarity=0.290  Sum_probs=72.8

Q ss_pred             ceecccCceEEEEEEcC-CCCEEEEEEeccC---ChhhHHHHHHHHHHHhcC-CCCCccceeeEEEeCCeeEEEEEccCC
Q 017984          275 NKLGQGGSGSVYKGTLP-GGEAVAVKRLFYN---TTQWVDHFFNEVNLISGI-NHKNLVKLLGCSITGPESLLVYEFVPN  349 (363)
Q Consensus       275 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~Ey~~~  349 (363)
                      +.||+|+||.||++... +++.||+|++...   .....+.+..|.+++..+ +||||+++++++..++..+|||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~   80 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG   80 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence            36899999999999964 5789999999753   233455688899999876 799999999999999999999999999


Q ss_pred             CChhHHhhcCC
Q 017984          350 QSLLDNLFDKM  360 (363)
Q Consensus       350 gsL~~~l~~~~  360 (363)
                      |+|..++....
T Consensus        81 ~~L~~~l~~~~   91 (321)
T cd05591          81 GDLMFQIQRSR   91 (321)
T ss_pred             CcHHHHHHHcC
Confidence            99998886543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.15  E-value=1.5e-10  Score=104.04  Aligned_cols=91  Identities=26%  Similarity=0.449  Sum_probs=78.2

Q ss_pred             cCCCcCceecccCceEEEEEEcC-CC---CEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTLP-GG---EAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLV  343 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~~-~g---~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  343 (363)
                      ++|...+.||+|+||.||++... ++   ..+++|.++.. .....+.|.+|++++.+++||||+++++++...+..++|
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   84 (268)
T cd05063           5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMII   84 (268)
T ss_pred             HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEE
Confidence            46778889999999999999864 23   37999998754 344466799999999999999999999999999999999


Q ss_pred             EEccCCCChhHHhhcC
Q 017984          344 YEFVPNQSLLDNLFDK  359 (363)
Q Consensus       344 ~Ey~~~gsL~~~l~~~  359 (363)
                      |||+++++|.+++.++
T Consensus        85 ~e~~~~~~L~~~~~~~  100 (268)
T cd05063          85 TEYMENGALDKYLRDH  100 (268)
T ss_pred             EEcCCCCCHHHHHHhc
Confidence            9999999999998754

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.15  E-value=1.3e-10  Score=104.15  Aligned_cols=91  Identities=30%  Similarity=0.400  Sum_probs=78.7

Q ss_pred             hccCCCcCceecccCceEEEEEEcCCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEc
Q 017984          267 ATNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       267 ~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      ..+.|...+.||+|+||.||++...++..+++|.+... ....+.|.+|+.++++++|+||+++++.+.. ...+++|||
T Consensus         4 ~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~   81 (260)
T cd05073           4 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEF   81 (260)
T ss_pred             cccceeEEeEecCccceEEEEEEecCCccEEEEecCCC-hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEe
Confidence            34678889999999999999999777778999988754 2345679999999999999999999998877 778999999


Q ss_pred             cCCCChhHHhhcC
Q 017984          347 VPNQSLLDNLFDK  359 (363)
Q Consensus       347 ~~~gsL~~~l~~~  359 (363)
                      +++|+|.+++...
T Consensus        82 ~~~~~L~~~~~~~   94 (260)
T cd05073          82 MAKGSLLDFLKSD   94 (260)
T ss_pred             CCCCcHHHHHHhC
Confidence            9999999999753

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.15  E-value=2.7e-10  Score=102.04  Aligned_cols=91  Identities=24%  Similarity=0.397  Sum_probs=80.0

Q ss_pred             CCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCCh--hhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEc
Q 017984          270 YFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTT--QWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      +|+..+.||+|+||.||++.. .+++.+++|.++....  ...+.+.+|+.+++.++|+||+++++.....+..++|+||
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY   80 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence            367788999999999999986 4688999999976533  3567899999999999999999999999999999999999


Q ss_pred             cCCCChhHHhhcCC
Q 017984          347 VPNQSLLDNLFDKM  360 (363)
Q Consensus       347 ~~~gsL~~~l~~~~  360 (363)
                      +++++|.+++....
T Consensus        81 ~~~~~L~~~~~~~~   94 (264)
T cd06626          81 CSGGTLEELLEHGR   94 (264)
T ss_pred             CCCCcHHHHHhhcC
Confidence            99999999987653

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.15  E-value=2.2e-10  Score=104.27  Aligned_cols=88  Identities=23%  Similarity=0.288  Sum_probs=75.5

Q ss_pred             CCcCceecccCceEEEEEEc-CCCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEc
Q 017984          271 FHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       271 ~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      |+..+.||+|+||.||++.. .+++.+|+|.+...   .......+.+|+.++.+++|+||+++++.+...+..++||||
T Consensus         2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   81 (285)
T cd05630           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL   81 (285)
T ss_pred             ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence            56678899999999999986 46889999998653   222335578999999999999999999999999999999999


Q ss_pred             cCCCChhHHhhc
Q 017984          347 VPNQSLLDNLFD  358 (363)
Q Consensus       347 ~~~gsL~~~l~~  358 (363)
                      +++++|.+++..
T Consensus        82 ~~g~~L~~~l~~   93 (285)
T cd05630          82 MNGGDLKFHIYH   93 (285)
T ss_pred             cCCCcHHHHHHH
Confidence            999999998854

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.15  E-value=2.8e-10  Score=102.26  Aligned_cols=91  Identities=26%  Similarity=0.403  Sum_probs=76.3

Q ss_pred             cCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC-----ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeC--Cee
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN-----TTQWVDHFFNEVNLISGINHKNLVKLLGCSITG--PES  340 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~  340 (363)
                      .+|...+.||+|+||.||++.. .++..||+|.+...     .....+.+.+|+.++.+++||||+++++++.+.  ..+
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL   81 (265)
T ss_pred             CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence            4678889999999999999986 45889999988532     123356789999999999999999999988763  468


Q ss_pred             EEEEEccCCCChhHHhhcC
Q 017984          341 LLVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       341 ~lv~Ey~~~gsL~~~l~~~  359 (363)
                      +++|||+++++|.+++.+.
T Consensus        82 ~~v~e~~~~~~L~~~l~~~  100 (265)
T cd06652          82 SIFMEHMPGGSIKDQLKSY  100 (265)
T ss_pred             EEEEEecCCCcHHHHHHHc
Confidence            8999999999999998654

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.14  E-value=2.4e-10  Score=104.07  Aligned_cols=88  Identities=24%  Similarity=0.295  Sum_probs=75.5

Q ss_pred             CCcCceecccCceEEEEEEc-CCCCEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEc
Q 017984          271 FHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNT---TQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       271 ~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      |...+.||+|+||.||++.. .+++.+|+|.+....   ......+.+|++++..++|+||+++.+.+..++..++||||
T Consensus         2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   81 (285)
T cd05632           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI   81 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence            55667899999999999986 468899999996532   22334578999999999999999999999999999999999


Q ss_pred             cCCCChhHHhhc
Q 017984          347 VPNQSLLDNLFD  358 (363)
Q Consensus       347 ~~~gsL~~~l~~  358 (363)
                      +++++|.+++..
T Consensus        82 ~~~~~L~~~~~~   93 (285)
T cd05632          82 MNGGDLKFHIYN   93 (285)
T ss_pred             ccCccHHHHHHH
Confidence            999999988864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.14  E-value=1.8e-10  Score=106.77  Aligned_cols=86  Identities=29%  Similarity=0.336  Sum_probs=72.7

Q ss_pred             ceecccCceEEEEEEc-CCCCEEEEEEeccC---ChhhHHHHHHHHHHHhcC-CCCCccceeeEEEeCCeeEEEEEccCC
Q 017984          275 NKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN---TTQWVDHFFNEVNLISGI-NHKNLVKLLGCSITGPESLLVYEFVPN  349 (363)
Q Consensus       275 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~Ey~~~  349 (363)
                      +.||+|+||.||++.. .+++.||+|++...   .....+.+..|..++..+ +||||+++++++...+..+|||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~   80 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG   80 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence            3689999999999996 45889999999743   223455678899998876 699999999999999999999999999


Q ss_pred             CChhHHhhcCC
Q 017984          350 QSLLDNLFDKM  360 (363)
Q Consensus       350 gsL~~~l~~~~  360 (363)
                      |+|.+++....
T Consensus        81 g~L~~~i~~~~   91 (320)
T cd05590          81 GDLMFHIQKSR   91 (320)
T ss_pred             chHHHHHHHcC
Confidence            99999887543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.14  E-value=1.8e-10  Score=104.42  Aligned_cols=91  Identities=24%  Similarity=0.345  Sum_probs=79.3

Q ss_pred             cCCCcCceecccCceEEEEEEc------CCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL------PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLL  342 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~------~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  342 (363)
                      .++.....||+|+||.||++..      .++..+++|.+..........|.+|++++..++|+||+++++++......++
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (280)
T cd05092           5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM   84 (280)
T ss_pred             HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence            4567788999999999999963      2356899999887666667789999999999999999999999999999999


Q ss_pred             EEEccCCCChhHHhhcC
Q 017984          343 VYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       343 v~Ey~~~gsL~~~l~~~  359 (363)
                      +|||+++|+|.++|...
T Consensus        85 v~e~~~~~~L~~~i~~~  101 (280)
T cd05092          85 VFEYMRHGDLNRFLRSH  101 (280)
T ss_pred             EEecCCCCCHHHHHHhc
Confidence            99999999999998754

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.14  E-value=3.4e-10  Score=101.35  Aligned_cols=91  Identities=25%  Similarity=0.357  Sum_probs=80.6

Q ss_pred             cCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccCCh-hhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEc
Q 017984          269 NYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYNTT-QWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      ++|...+.||+|++|.||++... +++.+++|++..... .....+.+|+..+.+++|+||+++++++...+..++||||
T Consensus         1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (264)
T cd06623           1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY   80 (264)
T ss_pred             CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence            35778899999999999999975 489999999976533 4567899999999999999999999999999999999999


Q ss_pred             cCCCChhHHhhcC
Q 017984          347 VPNQSLLDNLFDK  359 (363)
Q Consensus       347 ~~~gsL~~~l~~~  359 (363)
                      +++++|.+++...
T Consensus        81 ~~~~~L~~~l~~~   93 (264)
T cd06623          81 MDGGSLADLLKKV   93 (264)
T ss_pred             cCCCcHHHHHHHc
Confidence            9999999998753

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.14  E-value=1.8e-10  Score=105.81  Aligned_cols=93  Identities=30%  Similarity=0.388  Sum_probs=78.9

Q ss_pred             hccCCCcCceecccCceEEEEEEc------CCCCEEEEEEeccC-ChhhHHHHHHHHHHHhcC-CCCCccceeeEEEeCC
Q 017984          267 ATNYFHESNKLGQGGSGSVYKGTL------PGGEAVAVKRLFYN-TTQWVDHFFNEVNLISGI-NHKNLVKLLGCSITGP  338 (363)
Q Consensus       267 ~~~~~~~~~~lg~G~~g~Vy~~~~------~~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~  338 (363)
                      ..++|...+.||+|+||.||++..      ..+..+|+|.++.. .....+.+.+|+.+++++ +||||+++++++...+
T Consensus        33 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~  112 (302)
T cd05055          33 PRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGG  112 (302)
T ss_pred             cHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCC
Confidence            345688899999999999999973      12457999998754 334456799999999999 7999999999999999


Q ss_pred             eeEEEEEccCCCChhHHhhcC
Q 017984          339 ESLLVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       339 ~~~lv~Ey~~~gsL~~~l~~~  359 (363)
                      ..++||||+++|+|.+++...
T Consensus       113 ~~~lv~e~~~~~~L~~~i~~~  133 (302)
T cd05055         113 PILVITEYCCYGDLLNFLRRK  133 (302)
T ss_pred             ceEEEEEcCCCCcHHHHHHhC
Confidence            999999999999999999754

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.14  E-value=2e-10  Score=104.17  Aligned_cols=88  Identities=22%  Similarity=0.380  Sum_probs=77.8

Q ss_pred             CCcCceecccCceEEEEEEcC-CCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEccCC
Q 017984          271 FHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPN  349 (363)
Q Consensus       271 ~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~~~  349 (363)
                      |...+.||+|+||.||++... ++..+++|.+........+.+.+|+++++.++||||+++++.+..++..++||||+++
T Consensus         7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~   86 (282)
T cd06643           7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG   86 (282)
T ss_pred             HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence            455678999999999999974 4778899999766666677899999999999999999999999999999999999999


Q ss_pred             CChhHHhhc
Q 017984          350 QSLLDNLFD  358 (363)
Q Consensus       350 gsL~~~l~~  358 (363)
                      ++|..++.+
T Consensus        87 ~~l~~~~~~   95 (282)
T cd06643          87 GAVDAVMLE   95 (282)
T ss_pred             CcHHHHHHh
Confidence            999988764

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.14  E-value=3.3e-10  Score=101.76  Aligned_cols=89  Identities=29%  Similarity=0.483  Sum_probs=76.1

Q ss_pred             CCcCceecccCceEEEEEEc-CCCCEEEEEEeccCCh---------hhHHHHHHHHHHHhcCCCCCccceeeEEEeCCee
Q 017984          271 FHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTT---------QWVDHFFNEVNLISGINHKNLVKLLGCSITGPES  340 (363)
Q Consensus       271 ~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  340 (363)
                      |.....||+|++|.||++.. .+++.+|+|.+.....         ...+.+.+|+.++.+++||||+++++++...+..
T Consensus         2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   81 (267)
T cd06628           2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHL   81 (267)
T ss_pred             ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCcc
Confidence            56778999999999999986 4578999998864311         1235688999999999999999999999999999


Q ss_pred             EEEEEccCCCChhHHhhcC
Q 017984          341 LLVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       341 ~lv~Ey~~~gsL~~~l~~~  359 (363)
                      ++||||+++++|.+++...
T Consensus        82 ~lv~e~~~~~~L~~~l~~~  100 (267)
T cd06628          82 NIFLEYVPGGSVAALLNNY  100 (267)
T ss_pred             EEEEEecCCCCHHHHHHhc
Confidence            9999999999999998654

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.14  E-value=1.7e-10  Score=105.97  Aligned_cols=91  Identities=26%  Similarity=0.404  Sum_probs=76.9

Q ss_pred             cCCCcCceecccCceEEEEEEcC-CCC--EEEEEEeccC-ChhhHHHHHHHHHHHhcC-CCCCccceeeEEEeCCeeEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTLP-GGE--AVAVKRLFYN-TTQWVDHFFNEVNLISGI-NHKNLVKLLGCSITGPESLLV  343 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~--~vavK~l~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv  343 (363)
                      ++|+..+.||+|+||.||++... ++.  .+++|.++.. .......|.+|++++.++ +||||+++++++...+..++|
T Consensus         7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv   86 (303)
T cd05088           7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA   86 (303)
T ss_pred             hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEE
Confidence            46778889999999999999964 454  4678877643 334456799999999999 899999999999999999999


Q ss_pred             EEccCCCChhHHhhcC
Q 017984          344 YEFVPNQSLLDNLFDK  359 (363)
Q Consensus       344 ~Ey~~~gsL~~~l~~~  359 (363)
                      |||+++|+|.++|.+.
T Consensus        87 ~e~~~~~~L~~~l~~~  102 (303)
T cd05088          87 IEYAPHGNLLDFLRKS  102 (303)
T ss_pred             EEeCCCCcHHHHHHhc
Confidence            9999999999999754

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.14  E-value=1.1e-10  Score=105.94  Aligned_cols=98  Identities=23%  Similarity=0.344  Sum_probs=81.7

Q ss_pred             cchHHHHHhccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcC-CCCCccceeeEEE-
Q 017984          259 FSYETLEKATNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGI-NHKNLVKLLGCSI-  335 (363)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~-  335 (363)
                      +.++.+..+.++|...+.||+|+||.||++.. .+++.+|+|.+.... .....+.+|+.++.++ +||||+++++++. 
T Consensus         8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~   86 (286)
T cd06638           8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYK   86 (286)
T ss_pred             EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeee
Confidence            45577778889999999999999999999986 458899999886432 2235688999999999 6999999999874 


Q ss_pred             ----eCCeeEEEEEccCCCChhHHhh
Q 017984          336 ----TGPESLLVYEFVPNQSLLDNLF  357 (363)
Q Consensus       336 ----~~~~~~lv~Ey~~~gsL~~~l~  357 (363)
                          .++..++||||+++++|.+++.
T Consensus        87 ~~~~~~~~~~lv~e~~~~~~L~~~l~  112 (286)
T cd06638          87 KDVKNGDQLWLVLELCNGGSVTDLVK  112 (286)
T ss_pred             cccCCCCeEEEEEeecCCCCHHHHHH
Confidence                3457899999999999998875

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.14  E-value=2.8e-10  Score=105.28  Aligned_cols=85  Identities=22%  Similarity=0.251  Sum_probs=71.2

Q ss_pred             ceecccCceEEEEEEcC-CCCEEEEEEeccC---ChhhHHHHHHHHHHHhcC-CCCCccceeeEEEeCCeeEEEEEccCC
Q 017984          275 NKLGQGGSGSVYKGTLP-GGEAVAVKRLFYN---TTQWVDHFFNEVNLISGI-NHKNLVKLLGCSITGPESLLVYEFVPN  349 (363)
Q Consensus       275 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~Ey~~~  349 (363)
                      +.||+|+||.||++... +++.||+|+++..   .......+..|..++..+ +||||+++++++.+.+..+|||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~   80 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence            36899999999999974 5789999999753   123345577788888764 899999999999999999999999999


Q ss_pred             CChhHHhhcC
Q 017984          350 QSLLDNLFDK  359 (363)
Q Consensus       350 gsL~~~l~~~  359 (363)
                      |+|.+++...
T Consensus        81 g~L~~~l~~~   90 (316)
T cd05619          81 GDLMFHIQSC   90 (316)
T ss_pred             CcHHHHHHHc
Confidence            9999998754

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.14  E-value=1.3e-10  Score=103.97  Aligned_cols=90  Identities=22%  Similarity=0.210  Sum_probs=79.2

Q ss_pred             CCCcCceecccCceEEEEEEcC-CCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEE
Q 017984          270 YFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYE  345 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  345 (363)
                      +|...+.||.|+||.||++... +++.+|+|.+...   .....+.+.+|++++++++||||+++++.+..+...++|+|
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   80 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD   80 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence            4677889999999999999974 5889999999753   22446789999999999999999999999999999999999


Q ss_pred             ccCCCChhHHhhcC
Q 017984          346 FVPNQSLLDNLFDK  359 (363)
Q Consensus       346 y~~~gsL~~~l~~~  359 (363)
                      |+++++|.+++...
T Consensus        81 ~~~~~~L~~~l~~~   94 (258)
T cd05578          81 LLLGGDLRYHLSQK   94 (258)
T ss_pred             CCCCCCHHHHHHhc
Confidence            99999999998765

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.14  E-value=2.5e-10  Score=105.70  Aligned_cols=85  Identities=26%  Similarity=0.304  Sum_probs=72.8

Q ss_pred             ceecccCceEEEEEEcC-CCCEEEEEEeccC---ChhhHHHHHHHHHHHhcC-CCCCccceeeEEEeCCeeEEEEEccCC
Q 017984          275 NKLGQGGSGSVYKGTLP-GGEAVAVKRLFYN---TTQWVDHFFNEVNLISGI-NHKNLVKLLGCSITGPESLLVYEFVPN  349 (363)
Q Consensus       275 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~Ey~~~  349 (363)
                      +.||+|+||.||++... +++.+|+|+++..   .......+.+|++++..+ +||||+++++++...+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~   80 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG   80 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            36899999999999874 5789999999753   233455678999999888 699999999999999999999999999


Q ss_pred             CChhHHhhcC
Q 017984          350 QSLLDNLFDK  359 (363)
Q Consensus       350 gsL~~~l~~~  359 (363)
                      |+|..++.+.
T Consensus        81 ~~L~~~~~~~   90 (318)
T cd05570          81 GDLMFHIQRS   90 (318)
T ss_pred             CCHHHHHHHc
Confidence            9999988765

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.13  E-value=7.8e-11  Score=113.45  Aligned_cols=95  Identities=24%  Similarity=0.323  Sum_probs=80.8

Q ss_pred             HhccCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccC---ChhhHHHHHHHHHHHhcC-CCCCccceeeEEEeCCee
Q 017984          266 KATNYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYN---TTQWVDHFFNEVNLISGI-NHKNLVKLLGCSITGPES  340 (363)
Q Consensus       266 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~  340 (363)
                      ...++|....+||+|.||.|+.+.+. +++.+|||.+++.   .....+..+.|.+++.-. +||.|++|+.++.+.+++
T Consensus       365 ~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l  444 (694)
T KOG0694|consen  365 LTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHL  444 (694)
T ss_pred             ccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeE
Confidence            34567889999999999999999974 5789999999875   445577788999888877 599999999999999999


Q ss_pred             EEEEEccCCCChhHHhhcCC
Q 017984          341 LLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       341 ~lv~Ey~~~gsL~~~l~~~~  360 (363)
                      |+||||+.|||+..+.+...
T Consensus       445 ~fvmey~~Ggdm~~~~~~~~  464 (694)
T KOG0694|consen  445 FFVMEYVAGGDLMHHIHTDV  464 (694)
T ss_pred             EEEEEecCCCcEEEEEeccc
Confidence            99999999999776665443

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.13  E-value=1.7e-10  Score=103.53  Aligned_cols=90  Identities=31%  Similarity=0.419  Sum_probs=75.9

Q ss_pred             ccCCCcCceecccCceEEEEEEcCCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEcc
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFV  347 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~  347 (363)
                      .++|...++||+|+||.||++...+...||+|.++.... ..+.|.+|+.++..++||||+++++.+. ....++||||+
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~   82 (262)
T cd05071           5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYM   82 (262)
T ss_pred             hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCcc-CHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEcC
Confidence            355788899999999999999886667899999975322 3457999999999999999999998764 45689999999


Q ss_pred             CCCChhHHhhcC
Q 017984          348 PNQSLLDNLFDK  359 (363)
Q Consensus       348 ~~gsL~~~l~~~  359 (363)
                      ++|+|.+++...
T Consensus        83 ~~~~L~~~~~~~   94 (262)
T cd05071          83 SKGSLLDFLKGE   94 (262)
T ss_pred             CCCcHHHHHhhc
Confidence            999999999753

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.13  E-value=2.2e-10  Score=103.92  Aligned_cols=91  Identities=31%  Similarity=0.508  Sum_probs=77.7

Q ss_pred             cCCCcCceecccCceEEEEEEcCC------CCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTLPG------GEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESL  341 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~~~------g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  341 (363)
                      ++|+..+.||+|+||.||++....      ...|++|.+... ......+|.+|+.++.+++||||+++++++......+
T Consensus         5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~   84 (283)
T cd05048           5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC   84 (283)
T ss_pred             HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence            357788899999999999998532      257999998754 3344567999999999999999999999999989999


Q ss_pred             EEEEccCCCChhHHhhcC
Q 017984          342 LVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       342 lv~Ey~~~gsL~~~l~~~  359 (363)
                      ++|||+++|+|.++|...
T Consensus        85 ~~~e~~~~~~L~~~l~~~  102 (283)
T cd05048          85 MLFEYLAHGDLHEFLVRN  102 (283)
T ss_pred             EEEecCCCCcHHHHHHhc
Confidence            999999999999999754

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.13  E-value=2.7e-10  Score=105.68  Aligned_cols=91  Identities=22%  Similarity=0.183  Sum_probs=75.8

Q ss_pred             CCCcCceecccCceEEEEEEcC-CCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCC-CCccceeeEEEeCCeeEEEE
Q 017984          270 YFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINH-KNLVKLLGCSITGPESLLVY  344 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~lv~  344 (363)
                      +|...+.||+|+||.||++... +++.||+|++...   .....+.+..|++++..++| ++|+++++++...+..++||
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM   80 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence            4677889999999999999964 5789999999743   23345678899999999976 56888999999999999999


Q ss_pred             EccCCCChhHHhhcCC
Q 017984          345 EFVPNQSLLDNLFDKM  360 (363)
Q Consensus       345 Ey~~~gsL~~~l~~~~  360 (363)
                      ||+++|+|.+++....
T Consensus        81 E~~~~g~L~~~~~~~~   96 (324)
T cd05587          81 EYVNGGDLMYHIQQVG   96 (324)
T ss_pred             cCCCCCcHHHHHHHcC
Confidence            9999999999886543

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.13  E-value=3e-10  Score=105.28  Aligned_cols=85  Identities=26%  Similarity=0.309  Sum_probs=69.7

Q ss_pred             ceecccCceEEEEEEc-CCCCEEEEEEeccC---ChhhHHHHHHHHH-HHhcCCCCCccceeeEEEeCCeeEEEEEccCC
Q 017984          275 NKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN---TTQWVDHFFNEVN-LISGINHKNLVKLLGCSITGPESLLVYEFVPN  349 (363)
Q Consensus       275 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~~~  349 (363)
                      ++||+|+||.||++.. .+++.+|+|++...   .......+..|.. +++.++||||+++++.+...+..+|||||+++
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG   80 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            3699999999999997 45889999999643   1222344566654 67889999999999999999999999999999


Q ss_pred             CChhHHhhcC
Q 017984          350 QSLLDNLFDK  359 (363)
Q Consensus       350 gsL~~~l~~~  359 (363)
                      |+|..++..+
T Consensus        81 ~~L~~~l~~~   90 (321)
T cd05603          81 GELFFHLQRE   90 (321)
T ss_pred             CCHHHHHHHc
Confidence            9999888654

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.13  E-value=3e-10  Score=101.40  Aligned_cols=90  Identities=16%  Similarity=0.261  Sum_probs=78.3

Q ss_pred             CCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEc
Q 017984          270 YFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      +|+..+.||+|+||.+|++.. .+|+.+++|.+...  ......++.+|+.++++++||||+++++++...+..++|+||
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY   80 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence            367788999999999999986 46889999998643  334456799999999999999999999999999999999999


Q ss_pred             cCCCChhHHhhcC
Q 017984          347 VPNQSLLDNLFDK  359 (363)
Q Consensus       347 ~~~gsL~~~l~~~  359 (363)
                      +++++|.+++...
T Consensus        81 ~~~~~l~~~~~~~   93 (256)
T cd08218          81 CEGGDLYKKINAQ   93 (256)
T ss_pred             CCCCcHHHHHHhc
Confidence            9999999988653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.13  E-value=1.9e-10  Score=103.37  Aligned_cols=90  Identities=24%  Similarity=0.350  Sum_probs=78.4

Q ss_pred             cCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVY  344 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  344 (363)
                      ++|+..+.||+|+||.||++.. .+++.++||.+...   ......+|.+|+.+++.++||||+++++++..++..+++|
T Consensus         2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08229           2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL   81 (267)
T ss_pred             chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence            4577888999999999999995 57899999988642   3334567999999999999999999999999999999999


Q ss_pred             EccCCCChhHHhhc
Q 017984          345 EFVPNQSLLDNLFD  358 (363)
Q Consensus       345 Ey~~~gsL~~~l~~  358 (363)
                      ||+++++|.+++..
T Consensus        82 e~~~~~~L~~~~~~   95 (267)
T cd08229          82 ELADAGDLSRMIKH   95 (267)
T ss_pred             EecCCCCHHHHHHH
Confidence            99999999998863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.13  E-value=1.8e-10  Score=103.39  Aligned_cols=90  Identities=36%  Similarity=0.493  Sum_probs=78.2

Q ss_pred             cCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEcc
Q 017984          269 NYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFV  347 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~  347 (363)
                      .+|...+.||+|++|.||++... .++.||+|.+... .....++.+|+.++..++||||+++++++...+..++||||+
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (263)
T cd05052           6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM   84 (263)
T ss_pred             HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC-chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeC
Confidence            34677889999999999999964 5889999998754 333567999999999999999999999999999999999999


Q ss_pred             CCCChhHHhhcC
Q 017984          348 PNQSLLDNLFDK  359 (363)
Q Consensus       348 ~~gsL~~~l~~~  359 (363)
                      ++++|.+++...
T Consensus        85 ~~~~L~~~~~~~   96 (263)
T cd05052          85 TYGNLLDYLREC   96 (263)
T ss_pred             CCCcHHHHHHhC
Confidence            999999998653

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.13  E-value=1.5e-10  Score=103.76  Aligned_cols=90  Identities=32%  Similarity=0.441  Sum_probs=76.8

Q ss_pred             ccCCCcCceecccCceEEEEEEcCCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEcc
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFV  347 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~  347 (363)
                      .++|...+.||+|+||.||++...++..+|+|.+..... ..+.|.+|+.++.+++|+|++++++++. ....+++|||+
T Consensus         5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~   82 (260)
T cd05070           5 RESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYM   82 (260)
T ss_pred             hHHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEec
Confidence            346778889999999999999987788899999875432 3456999999999999999999999875 45689999999


Q ss_pred             CCCChhHHhhcC
Q 017984          348 PNQSLLDNLFDK  359 (363)
Q Consensus       348 ~~gsL~~~l~~~  359 (363)
                      ++++|.+++.+.
T Consensus        83 ~~~~L~~~~~~~   94 (260)
T cd05070          83 SKGSLLDFLKDG   94 (260)
T ss_pred             CCCcHHHHHHhc
Confidence            999999998753

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.13  E-value=3.6e-10  Score=100.76  Aligned_cols=90  Identities=17%  Similarity=0.253  Sum_probs=78.5

Q ss_pred             CCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEc
Q 017984          270 YFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      +|...+.||+|++|.||++.. .+++.+|+|.+...  .......+.+|++++++++||||+++++.+..++..++||||
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY   80 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence            367788999999999999986 46889999998653  334466799999999999999999999999999999999999


Q ss_pred             cCCCChhHHhhcC
Q 017984          347 VPNQSLLDNLFDK  359 (363)
Q Consensus       347 ~~~gsL~~~l~~~  359 (363)
                      +++++|.+++.+.
T Consensus        81 ~~~~~L~~~~~~~   93 (256)
T cd08220          81 APGGTLAEYIQKR   93 (256)
T ss_pred             CCCCCHHHHHHHh
Confidence            9999999999764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.13  E-value=3.3e-10  Score=105.41  Aligned_cols=91  Identities=23%  Similarity=0.297  Sum_probs=76.6

Q ss_pred             CCCcCceecccCceEEEEEEc----CCCCEEEEEEeccC----ChhhHHHHHHHHHHHhcC-CCCCccceeeEEEeCCee
Q 017984          270 YFHESNKLGQGGSGSVYKGTL----PGGEAVAVKRLFYN----TTQWVDHFFNEVNLISGI-NHKNLVKLLGCSITGPES  340 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~~----~~g~~vavK~l~~~----~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~  340 (363)
                      +|...+.||+|+||.||++..    .+++.||+|++...    .....+.+.+|+.++..+ +||||+++++++..++..
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL   80 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence            367788999999999999874    35789999998642    223345688999999999 599999999999999999


Q ss_pred             EEEEEccCCCChhHHhhcCC
Q 017984          341 LLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       341 ~lv~Ey~~~gsL~~~l~~~~  360 (363)
                      ++||||+++|+|.+++..+.
T Consensus        81 ~lv~e~~~~g~L~~~l~~~~  100 (332)
T cd05614          81 HLILDYVSGGEMFTHLYQRD  100 (332)
T ss_pred             EEEEeCCCCCcHHHHHHHcC
Confidence            99999999999999987543

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.12  E-value=2.2e-10  Score=104.58  Aligned_cols=91  Identities=25%  Similarity=0.349  Sum_probs=78.7

Q ss_pred             cCCCcCceecccCceEEEEEEc------CCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL------PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLL  342 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~------~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  342 (363)
                      .+|...+.||+|+||.||++..      .++..+++|.+........+.|.+|++++.+++||||+++++++...+..++
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (291)
T cd05094           5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM   84 (291)
T ss_pred             HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence            3467788999999999999974      2345789999876655556779999999999999999999999999999999


Q ss_pred             EEEccCCCChhHHhhcC
Q 017984          343 VYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       343 v~Ey~~~gsL~~~l~~~  359 (363)
                      ||||+++++|.+++..+
T Consensus        85 v~e~~~~~~L~~~i~~~  101 (291)
T cd05094          85 VFEYMKHGDLNKFLRAH  101 (291)
T ss_pred             EEecCCCCcHHHHHHhc
Confidence            99999999999999754

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.12  E-value=2.9e-10  Score=103.66  Aligned_cols=89  Identities=31%  Similarity=0.394  Sum_probs=75.7

Q ss_pred             CCCcCceecccCceEEEEEEcC------CCCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEE
Q 017984          270 YFHESNKLGQGGSGSVYKGTLP------GGEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLL  342 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  342 (363)
                      +|...+.||+|+||.||++...      ....+++|.+... .......+.+|+.++..++||||+++++.+...+..++
T Consensus         1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l   80 (290)
T cd05045           1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL   80 (290)
T ss_pred             CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence            3677889999999999999842      2357899988754 33445679999999999999999999999999999999


Q ss_pred             EEEccCCCChhHHhhc
Q 017984          343 VYEFVPNQSLLDNLFD  358 (363)
Q Consensus       343 v~Ey~~~gsL~~~l~~  358 (363)
                      ++||+++|+|.++|..
T Consensus        81 v~e~~~~~~L~~~l~~   96 (290)
T cd05045          81 IVEYAKYGSLRSFLRE   96 (290)
T ss_pred             EEEecCCCCHHHHHHh
Confidence            9999999999999864

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.12  E-value=2.1e-10  Score=105.95  Aligned_cols=90  Identities=28%  Similarity=0.484  Sum_probs=75.5

Q ss_pred             cCCCcCceecccCceEEEEEEcC-CCC----EEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTLP-GGE----AVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLL  342 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~----~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  342 (363)
                      .+|+..+.||+|+||.||+|.+. +++    .||+|.++.. .....++|.+|+.++..++||||+++++++... ..++
T Consensus         7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~   85 (316)
T cd05108           7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL   85 (316)
T ss_pred             hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence            45888999999999999999853 333    4899998754 334566799999999999999999999998765 5679


Q ss_pred             EEEccCCCChhHHhhcC
Q 017984          343 VYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       343 v~Ey~~~gsL~~~l~~~  359 (363)
                      |+||+++|+|.+++..+
T Consensus        86 v~e~~~~g~l~~~l~~~  102 (316)
T cd05108          86 ITQLMPFGCLLDYVREH  102 (316)
T ss_pred             eeecCCCCCHHHHHHhc
Confidence            99999999999998764

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.12  E-value=3.2e-10  Score=102.68  Aligned_cols=91  Identities=30%  Similarity=0.404  Sum_probs=77.2

Q ss_pred             CCCcCceecccCceEEEEEEcC-----CCCEEEEEEeccCChh-hHHHHHHHHHHHhcCCCCCccceeeEEEe--CCeeE
Q 017984          270 YFHESNKLGQGGSGSVYKGTLP-----GGEAVAVKRLFYNTTQ-WVDHFFNEVNLISGINHKNLVKLLGCSIT--GPESL  341 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~~~-----~g~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~  341 (363)
                      .|...+.||+|+||.||++.+.     ++..+|+|.+...... ..+.|.+|+.+++.++||||+++++++..  +...+
T Consensus         5 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~   84 (284)
T cd05038           5 HLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLR   84 (284)
T ss_pred             hchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceE
Confidence            4667789999999999999853     3678999999765432 46679999999999999999999998877  56789


Q ss_pred             EEEEccCCCChhHHhhcCC
Q 017984          342 LVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       342 lv~Ey~~~gsL~~~l~~~~  360 (363)
                      +||||+++++|.+++....
T Consensus        85 lv~e~~~~~~l~~~l~~~~  103 (284)
T cd05038          85 LIMEYLPSGSLRDYLQRHR  103 (284)
T ss_pred             EEEecCCCCCHHHHHHhCc
Confidence            9999999999999997644

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.12  E-value=2.4e-10  Score=101.96  Aligned_cols=90  Identities=24%  Similarity=0.366  Sum_probs=78.1

Q ss_pred             cCCCcCceecccCceEEEEEEcCCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEccC
Q 017984          269 NYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVP  348 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~~  348 (363)
                      .+|...+.||+|+||.||++.+.++..+|+|.+..... ....|.+|++++++++||||+++++++......++||||++
T Consensus         4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~   82 (256)
T cd05112           4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAM-SEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFME   82 (256)
T ss_pred             hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCC-CHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCC
Confidence            35667889999999999999886678899998865422 24569999999999999999999999999999999999999


Q ss_pred             CCChhHHhhcC
Q 017984          349 NQSLLDNLFDK  359 (363)
Q Consensus       349 ~gsL~~~l~~~  359 (363)
                      +++|.+++..+
T Consensus        83 ~~~L~~~~~~~   93 (256)
T cd05112          83 HGCLSDYLRAQ   93 (256)
T ss_pred             CCcHHHHHHhC
Confidence            99999998754

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.12  E-value=2.8e-10  Score=103.93  Aligned_cols=93  Identities=27%  Similarity=0.379  Sum_probs=79.3

Q ss_pred             ccCCCcCceecccCceEEEEEEcCC-----------------CCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccc
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLPG-----------------GEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVK  329 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~~-----------------g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~  329 (363)
                      ..+|...+.||+|+||.||++...+                 +..||+|.+... .....++|.+|++++.+++||||++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~   83 (296)
T cd05051           4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR   83 (296)
T ss_pred             hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence            4567889999999999999987532                 246899998754 3445678999999999999999999


Q ss_pred             eeeEEEeCCeeEEEEEccCCCChhHHhhcCC
Q 017984          330 LLGCSITGPESLLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       330 l~~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~  360 (363)
                      +++++..++..+++|||+++++|.++|.+..
T Consensus        84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~  114 (296)
T cd05051          84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHV  114 (296)
T ss_pred             EEEEEecCCCcEEEEecCCCCCHHHHHHhcc
Confidence            9999999999999999999999999987643

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=99.12  E-value=1e-11  Score=108.54  Aligned_cols=89  Identities=25%  Similarity=0.375  Sum_probs=78.6

Q ss_pred             CCcCceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEccCC
Q 017984          271 FHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPN  349 (363)
Q Consensus       271 ~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~~~  349 (363)
                      |....+||+|+||.|||+.+ ..|+.+|||.+...+  ..+++..|+.+|++.+.|++|+++|.+.....+|+|||||--
T Consensus        35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~s--DLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGA  112 (502)
T KOG0574|consen   35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDT--DLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGA  112 (502)
T ss_pred             HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccc--hHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCC
Confidence            45677899999999999997 459999999987543  357899999999999999999999999999999999999999


Q ss_pred             CChhHHhhcCCC
Q 017984          350 QSLLDNLFDKML  361 (363)
Q Consensus       350 gsL~~~l~~~~~  361 (363)
                      |+..+.++-++.
T Consensus       113 GSiSDI~R~R~K  124 (502)
T KOG0574|consen  113 GSISDIMRARRK  124 (502)
T ss_pred             CcHHHHHHHhcC
Confidence            999999876543

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.12  E-value=3.2e-10  Score=102.76  Aligned_cols=83  Identities=20%  Similarity=0.237  Sum_probs=70.1

Q ss_pred             ecccCceEEEEEEc-CCCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEccCCCCh
Q 017984          277 LGQGGSGSVYKGTL-PGGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQSL  352 (363)
Q Consensus       277 lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~~~gsL  352 (363)
                      ||+|+||.||++.. .+|+.+|+|.+...   .......+..|++++.+++||||+++++.+..+...++||||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L   80 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL   80 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence            69999999999986 45899999999642   112234567799999999999999999999999999999999999999


Q ss_pred             hHHhhcC
Q 017984          353 LDNLFDK  359 (363)
Q Consensus       353 ~~~l~~~  359 (363)
                      .+++...
T Consensus        81 ~~~~~~~   87 (277)
T cd05607          81 KYHIYNV   87 (277)
T ss_pred             HHHHHhc
Confidence            9887643

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.12  E-value=3.3e-11  Score=113.59  Aligned_cols=82  Identities=26%  Similarity=0.415  Sum_probs=71.8

Q ss_pred             CCcCceecccCceEEEEEEcCCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEccCCC
Q 017984          271 FHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQ  350 (363)
Q Consensus       271 ~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~~~g  350 (363)
                      +...+.||.|+-|.||+|+++ ++.||||+++...       ..+|+.|++|+||||+.|.|+|....-.+||||||+.|
T Consensus       126 IsELeWlGSGaQGAVF~Grl~-netVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~G  197 (904)
T KOG4721|consen  126 ISELEWLGSGAQGAVFLGRLH-NETVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQG  197 (904)
T ss_pred             hhhhhhhccCcccceeeeecc-CceehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccc
Confidence            345678999999999999997 6789999875321       35788999999999999999999999999999999999


Q ss_pred             ChhHHhhcCC
Q 017984          351 SLLDNLFDKM  360 (363)
Q Consensus       351 sL~~~l~~~~  360 (363)
                      -|.++|+..+
T Consensus       198 qL~~VLka~~  207 (904)
T KOG4721|consen  198 QLYEVLKAGR  207 (904)
T ss_pred             cHHHHHhccC
Confidence            9999998654

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.12  E-value=3.4e-10  Score=104.71  Aligned_cols=86  Identities=22%  Similarity=0.230  Sum_probs=70.5

Q ss_pred             ceecccCceEEEEEEc-CCCCEEEEEEeccC---ChhhHHHHHHHHHHHhcC-CCCCccceeeEEEeCCeeEEEEEccCC
Q 017984          275 NKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN---TTQWVDHFFNEVNLISGI-NHKNLVKLLGCSITGPESLLVYEFVPN  349 (363)
Q Consensus       275 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~Ey~~~  349 (363)
                      +.||+|+||.||++.. .+++.||+|.++..   .....+.+..|..++..+ +||||+++++++..++..++||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g   80 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            3699999999999996 45789999999743   223345566777777654 899999999999999999999999999


Q ss_pred             CChhHHhhcCC
Q 017984          350 QSLLDNLFDKM  360 (363)
Q Consensus       350 gsL~~~l~~~~  360 (363)
                      |+|.+++....
T Consensus        81 g~L~~~~~~~~   91 (316)
T cd05592          81 GDLMFHIQSSG   91 (316)
T ss_pred             CcHHHHHHHcC
Confidence            99999886543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.12  E-value=3.9e-10  Score=104.72  Aligned_cols=86  Identities=27%  Similarity=0.299  Sum_probs=70.5

Q ss_pred             ceecccCceEEEEEEc-CCCCEEEEEEeccC---ChhhHHHHHHHHH-HHhcCCCCCccceeeEEEeCCeeEEEEEccCC
Q 017984          275 NKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN---TTQWVDHFFNEVN-LISGINHKNLVKLLGCSITGPESLLVYEFVPN  349 (363)
Q Consensus       275 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~~~  349 (363)
                      +.||+|+||.||++.. .+|+.+|+|++...   .......+..|.. +++.++||||+++++.+...+..+|||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG   80 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence            3689999999999986 56899999999643   2233445666665 46779999999999999999999999999999


Q ss_pred             CChhHHhhcCC
Q 017984          350 QSLLDNLFDKM  360 (363)
Q Consensus       350 gsL~~~l~~~~  360 (363)
                      |+|..++....
T Consensus        81 ~~L~~~l~~~~   91 (325)
T cd05604          81 GELFFHLQRER   91 (325)
T ss_pred             CCHHHHHHHcC
Confidence            99998886543

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.12  E-value=4e-10  Score=104.77  Aligned_cols=85  Identities=21%  Similarity=0.252  Sum_probs=72.9

Q ss_pred             ceecccCceEEEEEEc-CCCCEEEEEEeccC---ChhhHHHHHHHHHHHhcC-CCCCccceeeEEEeCCeeEEEEEccCC
Q 017984          275 NKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN---TTQWVDHFFNEVNLISGI-NHKNLVKLLGCSITGPESLLVYEFVPN  349 (363)
Q Consensus       275 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~Ey~~~  349 (363)
                      +.||+|+||.||++.. .+++.+|+|+++..   .....+.+.+|+.++.++ +||||+++++++...+.++|||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG   80 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence            3699999999999996 45789999999753   233456688999999888 699999999999999999999999999


Q ss_pred             CChhHHhhcC
Q 017984          350 QSLLDNLFDK  359 (363)
Q Consensus       350 gsL~~~l~~~  359 (363)
                      |+|.+++...
T Consensus        81 ~~L~~~~~~~   90 (327)
T cd05617          81 GDLMFHMQRQ   90 (327)
T ss_pred             CcHHHHHHHc
Confidence            9999888654

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.12  E-value=2.8e-10  Score=101.45  Aligned_cols=89  Identities=25%  Similarity=0.390  Sum_probs=79.3

Q ss_pred             ccCCCcCceecccCceEEEEEEcCC-CCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEc
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLPG-GEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~~-g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      .++|...+.||+|+||.||++...+ ++.+++|.+.....  .+++.+|++++++++||||+++++.+......++++||
T Consensus         2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~   79 (256)
T cd06612           2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEY   79 (256)
T ss_pred             cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEec
Confidence            4578888999999999999999754 78999999875432  67899999999999999999999999999999999999


Q ss_pred             cCCCChhHHhhc
Q 017984          347 VPNQSLLDNLFD  358 (363)
Q Consensus       347 ~~~gsL~~~l~~  358 (363)
                      +++++|.+++..
T Consensus        80 ~~~~~L~~~l~~   91 (256)
T cd06612          80 CGAGSVSDIMKI   91 (256)
T ss_pred             CCCCcHHHHHHh
Confidence            999999999864

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.12  E-value=4.3e-10  Score=104.33  Aligned_cols=86  Identities=26%  Similarity=0.297  Sum_probs=70.3

Q ss_pred             ceecccCceEEEEEEc-CCCCEEEEEEeccC---ChhhHHHHHHHHH-HHhcCCCCCccceeeEEEeCCeeEEEEEccCC
Q 017984          275 NKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN---TTQWVDHFFNEVN-LISGINHKNLVKLLGCSITGPESLLVYEFVPN  349 (363)
Q Consensus       275 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~~~  349 (363)
                      +.||+|+||.||++.. .+|+.||+|++...   ......++..|.. ++..++||||+++++.+...+..++||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence            3699999999999997 46899999999643   2223344556654 56789999999999999999999999999999


Q ss_pred             CChhHHhhcCC
Q 017984          350 QSLLDNLFDKM  360 (363)
Q Consensus       350 gsL~~~l~~~~  360 (363)
                      |+|.+++..+.
T Consensus        81 g~L~~~l~~~~   91 (323)
T cd05575          81 GELFFHLQRER   91 (323)
T ss_pred             CCHHHHHHhcC
Confidence            99999887643

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.11  E-value=2.6e-10  Score=101.74  Aligned_cols=90  Identities=18%  Similarity=0.316  Sum_probs=77.8

Q ss_pred             CCCcCceecccCceEEEEEEcC-CCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEc
Q 017984          270 YFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      +|...+.||+|+||.||++... +|..+|+|.+...  .....+.+.+|+.+++.++|+||+++++.+......++|+||
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~   80 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY   80 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence            4677889999999999999974 5889999998643  223445788999999999999999999999999999999999


Q ss_pred             cCCCChhHHhhcC
Q 017984          347 VPNQSLLDNLFDK  359 (363)
Q Consensus       347 ~~~gsL~~~l~~~  359 (363)
                      +++++|.+++.+.
T Consensus        81 ~~~~~L~~~~~~~   93 (257)
T cd08225          81 CDGGDLMKRINRQ   93 (257)
T ss_pred             CCCCcHHHHHHhc
Confidence            9999999998654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.11  E-value=3.8e-10  Score=100.42  Aligned_cols=85  Identities=36%  Similarity=0.577  Sum_probs=75.2

Q ss_pred             ceecccCceEEEEEEcCCCCEEEEEEeccCCh-hhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEccCCCChh
Q 017984          275 NKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTT-QWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQSLL  353 (363)
Q Consensus       275 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~~~gsL~  353 (363)
                      ++||+|+||.||++...+++.|++|.+..... .....|.+|+.++++++|+||+++++++......++||||+++++|.
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~   80 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL   80 (251)
T ss_pred             CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence            36899999999999986689999999876433 35667999999999999999999999999999999999999999999


Q ss_pred             HHhhcC
Q 017984          354 DNLFDK  359 (363)
Q Consensus       354 ~~l~~~  359 (363)
                      +++.+.
T Consensus        81 ~~l~~~   86 (251)
T cd05041          81 TFLRKK   86 (251)
T ss_pred             HHHHhc
Confidence            998653

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.11  E-value=3.8e-10  Score=102.57  Aligned_cols=94  Identities=27%  Similarity=0.462  Sum_probs=83.1

Q ss_pred             HhccCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEE
Q 017984          266 KATNYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVY  344 (363)
Q Consensus       266 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  344 (363)
                      ..++.|...+.||+|++|.||++..+ +++.+++|.+..... ..+.+.+|++++..++|+||+++++.+......++|+
T Consensus        16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   94 (286)
T cd06614          16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVM   94 (286)
T ss_pred             CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEE
Confidence            45667888889999999999999975 688999999976544 4567899999999999999999999999999999999


Q ss_pred             EccCCCChhHHhhcCC
Q 017984          345 EFVPNQSLLDNLFDKM  360 (363)
Q Consensus       345 Ey~~~gsL~~~l~~~~  360 (363)
                      ||+++++|.+++..+.
T Consensus        95 e~~~~~~L~~~l~~~~  110 (286)
T cd06614          95 EYMDGGSLTDIITQNF  110 (286)
T ss_pred             eccCCCcHHHHHHHhc
Confidence            9999999999998763

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.10  E-value=3.3e-10  Score=101.84  Aligned_cols=85  Identities=27%  Similarity=0.373  Sum_probs=71.8

Q ss_pred             ceecccCceEEEEEEcCC-------------CCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeE
Q 017984          275 NKLGQGGSGSVYKGTLPG-------------GEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESL  341 (363)
Q Consensus       275 ~~lg~G~~g~Vy~~~~~~-------------g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  341 (363)
                      +.||+|+||.||+|.+.+             ...|++|.+..........|.+|+.++..++||||+++++++......+
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~   80 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI   80 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence            368999999999998532             2258899887655555567999999999999999999999999999999


Q ss_pred             EEEEccCCCChhHHhhcC
Q 017984          342 LVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       342 lv~Ey~~~gsL~~~l~~~  359 (363)
                      +||||+++|+|..++..+
T Consensus        81 lv~e~~~~~~l~~~~~~~   98 (262)
T cd05077          81 MVEEFVEFGPLDLFMHRK   98 (262)
T ss_pred             EEEecccCCCHHHHHHhc
Confidence            999999999999988653

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.10  E-value=2.8e-10  Score=104.65  Aligned_cols=92  Identities=24%  Similarity=0.333  Sum_probs=78.2

Q ss_pred             ccCCCcCceecccCceEEEEEEcC--------CCCEEEEEEeccC-ChhhHHHHHHHHHHHhcC-CCCCccceeeEEEeC
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLP--------GGEAVAVKRLFYN-TTQWVDHFFNEVNLISGI-NHKNLVKLLGCSITG  337 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~  337 (363)
                      .++|...+.||+|+||.||++...        ++..+|+|.+... ......++.+|+.++.++ +||||+++++++...
T Consensus        17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~   96 (307)
T cd05098          17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD   96 (307)
T ss_pred             hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence            456888999999999999998742        2357999999754 234456789999999999 799999999999999


Q ss_pred             CeeEEEEEccCCCChhHHhhcC
Q 017984          338 PESLLVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       338 ~~~~lv~Ey~~~gsL~~~l~~~  359 (363)
                      +..++||||+++|+|.++|...
T Consensus        97 ~~~~lv~e~~~~~~L~~~i~~~  118 (307)
T cd05098          97 GPLYVIVEYASKGNLREYLRAR  118 (307)
T ss_pred             CceEEEEecCCCCcHHHHHHhc
Confidence            9999999999999999999764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.10  E-value=3.7e-10  Score=104.75  Aligned_cols=89  Identities=22%  Similarity=0.210  Sum_probs=74.5

Q ss_pred             CCcCceecccCceEEEEEEc-CCCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCC-CCCccceeeEEEeCCeeEEEEE
Q 017984          271 FHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN---TTQWVDHFFNEVNLISGIN-HKNLVKLLGCSITGPESLLVYE  345 (363)
Q Consensus       271 ~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~E  345 (363)
                      |...+.||+|+||.||++.. .+|+.||+|++...   .....+.+..|..++..+. |++|+++++++...+..+||||
T Consensus         2 f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E   81 (323)
T cd05615           2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVME   81 (323)
T ss_pred             ceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEc
Confidence            56778999999999999986 46889999999743   2233456888999998885 5778889999999999999999


Q ss_pred             ccCCCChhHHhhcC
Q 017984          346 FVPNQSLLDNLFDK  359 (363)
Q Consensus       346 y~~~gsL~~~l~~~  359 (363)
                      |+++|+|.+++...
T Consensus        82 y~~~g~L~~~i~~~   95 (323)
T cd05615          82 YVNGGDLMYHIQQV   95 (323)
T ss_pred             CCCCCcHHHHHHHc
Confidence            99999999988654

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.10  E-value=2.4e-10  Score=102.11  Aligned_cols=84  Identities=33%  Similarity=0.456  Sum_probs=70.5

Q ss_pred             ceecccCceEEEEEEcCC-C----------CEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEE
Q 017984          275 NKLGQGGSGSVYKGTLPG-G----------EAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLV  343 (363)
Q Consensus       275 ~~lg~G~~g~Vy~~~~~~-g----------~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  343 (363)
                      +.||+|+||.||++...+ +          ..+++|.+...... ...|.+|+.++++++||||+++++++.. ...++|
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv   78 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV   78 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence            368999999999999753 2          25788877654333 5779999999999999999999999888 778999


Q ss_pred             EEccCCCChhHHhhcCC
Q 017984          344 YEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       344 ~Ey~~~gsL~~~l~~~~  360 (363)
                      |||+++|+|.+++....
T Consensus        79 ~e~~~~~~L~~~l~~~~   95 (259)
T cd05037          79 EEYVKFGPLDVFLHREK   95 (259)
T ss_pred             EEcCCCCcHHHHHHhhc
Confidence            99999999999997654

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.10  E-value=4.6e-10  Score=114.00  Aligned_cols=92  Identities=18%  Similarity=0.162  Sum_probs=80.2

Q ss_pred             ccCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLV  343 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  343 (363)
                      .++|...++||+|+||.||++... +++.||||+++..   .......+.+|+.++..++||||+++++.+......+||
T Consensus         3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lV   82 (669)
T cd05610           3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLV   82 (669)
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEE
Confidence            356888899999999999999974 6889999999753   233456789999999999999999999999999999999


Q ss_pred             EEccCCCChhHHhhcC
Q 017984          344 YEFVPNQSLLDNLFDK  359 (363)
Q Consensus       344 ~Ey~~~gsL~~~l~~~  359 (363)
                      |||+++++|.++|...
T Consensus        83 mEy~~g~~L~~li~~~   98 (669)
T cd05610          83 MEYLIGGDVKSLLHIY   98 (669)
T ss_pred             EeCCCCCCHHHHHHhc
Confidence            9999999999998653

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.10  E-value=2.4e-10  Score=117.47  Aligned_cols=94  Identities=22%  Similarity=0.331  Sum_probs=79.1

Q ss_pred             HHhccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEe--CCe
Q 017984          265 EKATNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSIT--GPE  339 (363)
Q Consensus       265 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~  339 (363)
                      ....++|...+.||+|+||.||++.. .++..+|+|.+...  .......|..|+.++..|+|||||++++++..  ...
T Consensus         9 e~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~   88 (1021)
T PTZ00266          9 ESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQK   88 (1021)
T ss_pred             ccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCE
Confidence            34456788999999999999999996 45778999998743  33445679999999999999999999998854  357


Q ss_pred             eEEEEEccCCCChhHHhhc
Q 017984          340 SLLVYEFVPNQSLLDNLFD  358 (363)
Q Consensus       340 ~~lv~Ey~~~gsL~~~l~~  358 (363)
                      +||||||+++|+|.++|..
T Consensus        89 lyIVMEY~~gGSL~~lL~k  107 (1021)
T PTZ00266         89 LYILMEFCDAGDLSRNIQK  107 (1021)
T ss_pred             EEEEEeCCCCCcHHHHHHH
Confidence            8999999999999998864

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=99.10  E-value=1.2e-10  Score=114.99  Aligned_cols=90  Identities=26%  Similarity=0.394  Sum_probs=77.2

Q ss_pred             cCCCcCceecccCceEEEEEEcCCC-CEEEEEEeccCChhhHHHHHHHHHHHhcCC-CCCccceeeE-EEe------CCe
Q 017984          269 NYFHESNKLGQGGSGSVYKGTLPGG-EAVAVKRLFYNTTQWVDHFFNEVNLISGIN-HKNLVKLLGC-SIT------GPE  339 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~~~g-~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~-~~~------~~~  339 (363)
                      .++.+.+.|.+|||+.||.+....+ ..+|+|++...+....+...+||++|++|+ |+|||.+++. ...      .-+
T Consensus        37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~E  116 (738)
T KOG1989|consen   37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWE  116 (738)
T ss_pred             EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeE
Confidence            3456788999999999999997554 999999998888888889999999999997 9999999993 322      137


Q ss_pred             eEEEEEccCCCChhHHhhc
Q 017984          340 SLLVYEFVPNQSLLDNLFD  358 (363)
Q Consensus       340 ~~lv~Ey~~~gsL~~~l~~  358 (363)
                      .+|.||||++|+|-++|..
T Consensus       117 vllLmEyC~gg~Lvd~mn~  135 (738)
T KOG1989|consen  117 VLLLMEYCKGGSLVDFMNT  135 (738)
T ss_pred             EEeehhhccCCcHHHHHHH
Confidence            8999999999999999863

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.10  E-value=4.3e-10  Score=102.17  Aligned_cols=90  Identities=28%  Similarity=0.406  Sum_probs=76.0

Q ss_pred             CCCcCceecccCceEEEEEEc-----CCCCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeC--CeeE
Q 017984          270 YFHESNKLGQGGSGSVYKGTL-----PGGEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITG--PESL  341 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~~-----~~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~  341 (363)
                      .|+..+.||+|+||.||++.+     .++..||+|.++.. .......|.+|+.+++.++||||+++.+++...  ...+
T Consensus         5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   84 (284)
T cd05079           5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK   84 (284)
T ss_pred             hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceE
Confidence            467788999999999999974     34778999998754 344456799999999999999999999988775  5789


Q ss_pred             EEEEccCCCChhHHhhcC
Q 017984          342 LVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       342 lv~Ey~~~gsL~~~l~~~  359 (363)
                      +||||+++++|.+++..+
T Consensus        85 lv~e~~~g~~L~~~l~~~  102 (284)
T cd05079          85 LIMEFLPSGSLKEYLPRN  102 (284)
T ss_pred             EEEEccCCCCHHHHHHhc
Confidence            999999999999998654

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.10  E-value=4.7e-10  Score=101.37  Aligned_cols=91  Identities=25%  Similarity=0.448  Sum_probs=78.3

Q ss_pred             CCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC-ChhhHHHHHHHHHHHhcCC---CCCccceeeEEEeCCeeEEEE
Q 017984          270 YFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN-TTQWVDHFFNEVNLISGIN---HKNLVKLLGCSITGPESLLVY  344 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lv~  344 (363)
                      .|+..+.||+|+||.||++.. .+++.+++|.+... ......++.+|+.++++++   |||++++++++......++||
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~   81 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM   81 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence            366778899999999999996 56889999998754 3344567899999999986   999999999999999999999


Q ss_pred             EccCCCChhHHhhcCC
Q 017984          345 EFVPNQSLLDNLFDKM  360 (363)
Q Consensus       345 Ey~~~gsL~~~l~~~~  360 (363)
                      ||+++++|.+++....
T Consensus        82 e~~~~~~L~~~~~~~~   97 (277)
T cd06917          82 EYAEGGSVRTLMKAGP   97 (277)
T ss_pred             ecCCCCcHHHHHHccC
Confidence            9999999999987653

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.10  E-value=4e-10  Score=103.76  Aligned_cols=90  Identities=26%  Similarity=0.345  Sum_probs=76.2

Q ss_pred             cCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEc
Q 017984          269 NYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYNT-TQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      ++|...+.||+|+||.||++... +++.||+|.++... ......+.+|+.++++++||||+++++++..++..++||||
T Consensus         6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   85 (309)
T cd07872           6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY   85 (309)
T ss_pred             CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence            45788899999999999999864 57889999997532 22334678999999999999999999999999999999999


Q ss_pred             cCCCChhHHhhcC
Q 017984          347 VPNQSLLDNLFDK  359 (363)
Q Consensus       347 ~~~gsL~~~l~~~  359 (363)
                      +++ +|.+++.+.
T Consensus        86 ~~~-~l~~~~~~~   97 (309)
T cd07872          86 LDK-DLKQYMDDC   97 (309)
T ss_pred             CCC-CHHHHHHhc
Confidence            975 888887653

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.10  E-value=9.5e-11  Score=109.39  Aligned_cols=92  Identities=16%  Similarity=0.220  Sum_probs=78.5

Q ss_pred             cCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCe-eEEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPE-SLLVY  344 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~~lv~  344 (363)
                      ++|...+.+|+|+||.++.... .++..+++|.+...  ....++...+|+.++++++|||||.+.+.|..++. ++|||
T Consensus         4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm   83 (426)
T KOG0589|consen    4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM   83 (426)
T ss_pred             chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence            5677888999999999998875 35779999999754  33344568899999999999999999999998887 99999


Q ss_pred             EccCCCChhHHhhcCC
Q 017984          345 EFVPNQSLLDNLFDKM  360 (363)
Q Consensus       345 Ey~~~gsL~~~l~~~~  360 (363)
                      +|++||+|.+.|.+.+
T Consensus        84 ~Y~eGg~l~~~i~~~k   99 (426)
T KOG0589|consen   84 EYCEGGDLAQLIKEQK   99 (426)
T ss_pred             eecCCCCHHHHHHHHh
Confidence            9999999999987654

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.10  E-value=3.5e-10  Score=103.38  Aligned_cols=89  Identities=27%  Similarity=0.395  Sum_probs=76.7

Q ss_pred             CCcCceecccCceEEEEEEcC-CCCEEEEEEeccCCh-----hhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEE
Q 017984          271 FHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYNTT-----QWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVY  344 (363)
Q Consensus       271 ~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  344 (363)
                      |...+.||+|++|.||++... +++.|++|.+.....     .....+.+|++++.+++|+||+++++++...+..++||
T Consensus         2 y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~   81 (298)
T cd07841           2 YEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVF   81 (298)
T ss_pred             ceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEE
Confidence            667789999999999999964 688999999975422     23455789999999999999999999999999999999


Q ss_pred             EccCCCChhHHhhcCC
Q 017984          345 EFVPNQSLLDNLFDKM  360 (363)
Q Consensus       345 Ey~~~gsL~~~l~~~~  360 (363)
                      ||+ +|+|.++|.++.
T Consensus        82 e~~-~~~L~~~i~~~~   96 (298)
T cd07841          82 EFM-ETDLEKVIKDKS   96 (298)
T ss_pred             ccc-CCCHHHHHhccC
Confidence            999 899999997654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.10  E-value=9.2e-11  Score=105.03  Aligned_cols=86  Identities=30%  Similarity=0.441  Sum_probs=73.0

Q ss_pred             ceecccCceEEEEEEcCC--------CCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEc
Q 017984          275 NKLGQGGSGSVYKGTLPG--------GEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       275 ~~lg~G~~g~Vy~~~~~~--------g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      +.||+|+||.||++....        ...+++|.+........++|.+|+.++..++||||+++++++..++..++||||
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~   80 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY   80 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence            368999999999998532        234888888665555567899999999999999999999999999999999999


Q ss_pred             cCCCChhHHhhcCC
Q 017984          347 VPNQSLLDNLFDKM  360 (363)
Q Consensus       347 ~~~gsL~~~l~~~~  360 (363)
                      +++|+|.++|..+.
T Consensus        81 ~~~g~L~~~l~~~~   94 (258)
T cd05078          81 VKFGSLDTYLKKNK   94 (258)
T ss_pred             CCCCcHHHHHhcCC
Confidence            99999999997643

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.10  E-value=4.8e-10  Score=102.07  Aligned_cols=89  Identities=21%  Similarity=0.277  Sum_probs=75.3

Q ss_pred             cCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeC--CeeEEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITG--PESLLVY  344 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv~  344 (363)
                      ++|...+.||.|++|.||++.. .+++.+|+|.+... ......++.+|++++++++||||+++++++...  ..++|||
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   80 (287)
T cd06621           1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM   80 (287)
T ss_pred             CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence            3577788999999999999997 45889999998754 334456799999999999999999999988653  4789999


Q ss_pred             EccCCCChhHHhh
Q 017984          345 EFVPNQSLLDNLF  357 (363)
Q Consensus       345 Ey~~~gsL~~~l~  357 (363)
                      ||+++++|.+++.
T Consensus        81 e~~~~~~L~~~l~   93 (287)
T cd06621          81 EYCEGGSLDSIYK   93 (287)
T ss_pred             EecCCCCHHHHHH
Confidence            9999999988865

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.10  E-value=3.5e-10  Score=103.56  Aligned_cols=91  Identities=23%  Similarity=0.350  Sum_probs=77.2

Q ss_pred             cCCCcCceecccCceEEEEEEcC-CCC--EEEEEEeccC-ChhhHHHHHHHHHHHhcC-CCCCccceeeEEEeCCeeEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTLP-GGE--AVAVKRLFYN-TTQWVDHFFNEVNLISGI-NHKNLVKLLGCSITGPESLLV  343 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~--~vavK~l~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv  343 (363)
                      ++|+..+.||+|+||.||++... ++.  .+++|.++.. .....+.|.+|+.++.++ +||||+++++++...+..++|
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv   81 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA   81 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence            46788899999999999999874 333  4788888742 344456799999999999 799999999999999999999


Q ss_pred             EEccCCCChhHHhhcC
Q 017984          344 YEFVPNQSLLDNLFDK  359 (363)
Q Consensus       344 ~Ey~~~gsL~~~l~~~  359 (363)
                      +||+++|+|.++|...
T Consensus        82 ~e~~~~~~L~~~l~~~   97 (297)
T cd05089          82 IEYAPYGNLLDFLRKS   97 (297)
T ss_pred             EEecCCCcHHHHHHhc
Confidence            9999999999999753

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.10  E-value=2.3e-10  Score=103.43  Aligned_cols=92  Identities=29%  Similarity=0.414  Sum_probs=78.6

Q ss_pred             ccCCCcCceecccCceEEEEEEcC------CCCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCee
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLP------GGEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPES  340 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  340 (363)
                      .++|...+.||+|+||.||++...      .+..+|+|.+... .......|.+|+.++..++||||+++++++......
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~   84 (277)
T cd05032           5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPT   84 (277)
T ss_pred             hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCc
Confidence            456778899999999999999863      2368999998754 234456799999999999999999999999999999


Q ss_pred             EEEEEccCCCChhHHhhcC
Q 017984          341 LLVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       341 ~lv~Ey~~~gsL~~~l~~~  359 (363)
                      ++||||+++|+|.++|...
T Consensus        85 ~~v~e~~~~~~L~~~l~~~  103 (277)
T cd05032          85 LVVMELMAKGDLKSYLRSR  103 (277)
T ss_pred             EEEEecCCCCCHHHHHHhc
Confidence            9999999999999998653

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.10  E-value=5.1e-10  Score=101.54  Aligned_cols=90  Identities=22%  Similarity=0.356  Sum_probs=76.9

Q ss_pred             cCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYE  345 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  345 (363)
                      ++|.....||+|++|.||++... +++.||+|++...  .....+.+.+|+.++..++||||+++++++......++|||
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e   80 (286)
T cd07847           1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE   80 (286)
T ss_pred             CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence            35778889999999999999975 5889999998643  22234568899999999999999999999999999999999


Q ss_pred             ccCCCChhHHhhc
Q 017984          346 FVPNQSLLDNLFD  358 (363)
Q Consensus       346 y~~~gsL~~~l~~  358 (363)
                      |+++++|..++..
T Consensus        81 ~~~~~~l~~~~~~   93 (286)
T cd07847          81 YCDHTVLNELEKN   93 (286)
T ss_pred             ccCccHHHHHHhC
Confidence            9999988887654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.10  E-value=5.1e-10  Score=103.81  Aligned_cols=90  Identities=22%  Similarity=0.194  Sum_probs=75.0

Q ss_pred             CCCcCceecccCceEEEEEEcC-CCCEEEEEEeccC---ChhhHHHHHHHHHHHhcC-CCCCccceeeEEEeCCeeEEEE
Q 017984          270 YFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYN---TTQWVDHFFNEVNLISGI-NHKNLVKLLGCSITGPESLLVY  344 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~  344 (363)
                      +|...+.||+|+||.||++... +++.+|+|++...   .......+..|..++..+ +|++|+++++++...+.++|||
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM   80 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence            4677889999999999999864 5789999999753   223345577888888877 5899999999999999999999


Q ss_pred             EccCCCChhHHhhcC
Q 017984          345 EFVPNQSLLDNLFDK  359 (363)
Q Consensus       345 Ey~~~gsL~~~l~~~  359 (363)
                      ||+++|+|.+++...
T Consensus        81 E~~~~g~L~~~~~~~   95 (323)
T cd05616          81 EYVNGGDLMYQIQQV   95 (323)
T ss_pred             cCCCCCCHHHHHHHc
Confidence            999999999988654

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.10  E-value=3.8e-11  Score=110.00  Aligned_cols=92  Identities=21%  Similarity=0.369  Sum_probs=80.8

Q ss_pred             CCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEcc
Q 017984          270 YFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFV  347 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~  347 (363)
                      .|...+.||+|.||.||||.. ..++.||+|++... .....+++.+|+.++.+++++||.+++|.+..+..+|++||||
T Consensus        14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~   93 (467)
T KOG0201|consen   14 LYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYC   93 (467)
T ss_pred             ccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHh
Confidence            355668999999999999996 56889999999864 4455778999999999999999999999999999999999999


Q ss_pred             CCCChhHHhhcCCC
Q 017984          348 PNQSLLDNLFDKML  361 (363)
Q Consensus       348 ~~gsL~~~l~~~~~  361 (363)
                      .||++.+.|.-...
T Consensus        94 ~gGsv~~lL~~~~~  107 (467)
T KOG0201|consen   94 GGGSVLDLLKSGNI  107 (467)
T ss_pred             cCcchhhhhccCCC
Confidence            99999999875543

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.09  E-value=2.5e-10  Score=104.12  Aligned_cols=95  Identities=27%  Similarity=0.368  Sum_probs=79.6

Q ss_pred             HHhccCCCcCceecccCceEEEEEEcC------CCCEEEEEEeccC-ChhhHHHHHHHHHHHhcC-CCCCccceeeEEEe
Q 017984          265 EKATNYFHESNKLGQGGSGSVYKGTLP------GGEAVAVKRLFYN-TTQWVDHFFNEVNLISGI-NHKNLVKLLGCSIT  336 (363)
Q Consensus       265 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~  336 (363)
                      ....++|...+.||+|+||.||++...      ....+|+|.+... ......++.+|+.++.++ +|+||+++++++..
T Consensus         8 ~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~   87 (293)
T cd05053           8 ELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQ   87 (293)
T ss_pred             ccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcC
Confidence            344566788899999999999999853      2357999998753 334456799999999999 79999999999999


Q ss_pred             CCeeEEEEEccCCCChhHHhhcC
Q 017984          337 GPESLLVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       337 ~~~~~lv~Ey~~~gsL~~~l~~~  359 (363)
                      .+..+++|||+++|+|.+++...
T Consensus        88 ~~~~~li~e~~~~~~L~~~l~~~  110 (293)
T cd05053          88 EGPLYVVVEYAAHGNLRDFLRAR  110 (293)
T ss_pred             CCCeEEEEEeCCCCcHHHHHHhc
Confidence            99999999999999999999753

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.09  E-value=3.4e-10  Score=101.98  Aligned_cols=93  Identities=25%  Similarity=0.376  Sum_probs=77.7

Q ss_pred             HhccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcC-CCCCccceeeEEEeC------
Q 017984          266 KATNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGI-NHKNLVKLLGCSITG------  337 (363)
Q Consensus       266 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~------  337 (363)
                      .+++.|...+.||+|+||.||++.. .+++.+|+|++.... .....+.+|+.++.++ +||||+++++.+...      
T Consensus         3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~   81 (272)
T cd06637           3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD   81 (272)
T ss_pred             ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence            4566788888999999999999986 458899999987543 3345688999999998 699999999998753      


Q ss_pred             CeeEEEEEccCCCChhHHhhcC
Q 017984          338 PESLLVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       338 ~~~~lv~Ey~~~gsL~~~l~~~  359 (363)
                      ...++||||+++|+|.+++...
T Consensus        82 ~~~~iv~e~~~~~~L~~~l~~~  103 (272)
T cd06637          82 DQLWLVMEFCGAGSVTDLIKNT  103 (272)
T ss_pred             cEEEEEEEcCCCCcHHHHHHhc
Confidence            4689999999999999998753

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.09  E-value=2.7e-10  Score=105.22  Aligned_cols=93  Identities=26%  Similarity=0.338  Sum_probs=77.9

Q ss_pred             hccCCCcCceecccCceEEEEEEcC--------CCCEEEEEEeccC-ChhhHHHHHHHHHHHhcC-CCCCccceeeEEEe
Q 017984          267 ATNYFHESNKLGQGGSGSVYKGTLP--------GGEAVAVKRLFYN-TTQWVDHFFNEVNLISGI-NHKNLVKLLGCSIT  336 (363)
Q Consensus       267 ~~~~~~~~~~lg~G~~g~Vy~~~~~--------~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~  336 (363)
                      ..++|...+.||+|+||.||++...        ....+|+|.++.. ......++.+|+.++.++ +||||+++++++..
T Consensus        10 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~   89 (314)
T cd05099          10 PRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQ   89 (314)
T ss_pred             cHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEcc
Confidence            3456778899999999999998731        2457899998753 334456799999999999 69999999999999


Q ss_pred             CCeeEEEEEccCCCChhHHhhcC
Q 017984          337 GPESLLVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       337 ~~~~~lv~Ey~~~gsL~~~l~~~  359 (363)
                      .+..++||||+++|+|.++|...
T Consensus        90 ~~~~~lv~e~~~~g~L~~~i~~~  112 (314)
T cd05099          90 EGPLYVIVEYAAKGNLREFLRAR  112 (314)
T ss_pred             CCceEEEEecCCCCcHHHHHHhc
Confidence            89999999999999999999754

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.09  E-value=2.8e-10  Score=102.51  Aligned_cols=84  Identities=24%  Similarity=0.334  Sum_probs=70.5

Q ss_pred             eecccCceEEEEEEcCCC---CEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEccCCCC
Q 017984          276 KLGQGGSGSVYKGTLPGG---EAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQS  351 (363)
Q Consensus       276 ~lg~G~~g~Vy~~~~~~g---~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~~~gs  351 (363)
                      .||+|+||.||++...++   ..+++|.+... .....+.|.+|+.+++.++||||+++++.+......++||||+++|+
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~   81 (268)
T cd05086           2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD   81 (268)
T ss_pred             cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence            589999999999975332   35667777644 23446689999999999999999999999999999999999999999


Q ss_pred             hhHHhhcC
Q 017984          352 LLDNLFDK  359 (363)
Q Consensus       352 L~~~l~~~  359 (363)
                      |.+++.+.
T Consensus        82 L~~~l~~~   89 (268)
T cd05086          82 LKSYLSQE   89 (268)
T ss_pred             HHHHHHhh
Confidence            99998753

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.09  E-value=4.6e-10  Score=101.05  Aligned_cols=89  Identities=26%  Similarity=0.447  Sum_probs=73.7

Q ss_pred             CCcCceecccCceEEEEEEcC-C---CCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCe-----
Q 017984          271 FHESNKLGQGGSGSVYKGTLP-G---GEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPE-----  339 (363)
Q Consensus       271 ~~~~~~lg~G~~g~Vy~~~~~-~---g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-----  339 (363)
                      |...+.||+|+||.||++.+. +   +..||+|+++..  .......+.+|+.+++.++||||+++++.+.....     
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   80 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP   80 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence            456789999999999999863 2   367999999753  33445679999999999999999999998876554     


Q ss_pred             -eEEEEEccCCCChhHHhhcC
Q 017984          340 -SLLVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       340 -~~lv~Ey~~~gsL~~~l~~~  359 (363)
                       .++++||+++|+|..++...
T Consensus        81 ~~~~v~e~~~~~~l~~~l~~~  101 (273)
T cd05035          81 KPMVILPFMKHGDLHSFLLYS  101 (273)
T ss_pred             ccEEEEeccCCCCHHHHHHHh
Confidence             79999999999999988543

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.09  E-value=5.5e-10  Score=102.42  Aligned_cols=90  Identities=28%  Similarity=0.364  Sum_probs=76.5

Q ss_pred             cCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEc
Q 017984          269 NYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      +.|...+.||+|+||.||++... +++.||+|.++.. .......+.+|+.++.+++||||+++++++..++..++||||
T Consensus         6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~   85 (301)
T cd07873           6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   85 (301)
T ss_pred             cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence            45778899999999999999864 5789999998743 233345678999999999999999999999999999999999


Q ss_pred             cCCCChhHHhhcC
Q 017984          347 VPNQSLLDNLFDK  359 (363)
Q Consensus       347 ~~~gsL~~~l~~~  359 (363)
                      ++ ++|.+++.+.
T Consensus        86 ~~-~~l~~~l~~~   97 (301)
T cd07873          86 LD-KDLKQYLDDC   97 (301)
T ss_pred             cc-cCHHHHHHhc
Confidence            97 5899888653

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.09  E-value=3.2e-10  Score=103.92  Aligned_cols=88  Identities=27%  Similarity=0.405  Sum_probs=76.3

Q ss_pred             cCceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEccCCCC
Q 017984          273 ESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQS  351 (363)
Q Consensus       273 ~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~~~gs  351 (363)
                      ....||+|+||.||++.. .+++.||+|.+........+.+.+|+.++..++||||+++++.+..++..++|+||+++++
T Consensus        25 ~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~  104 (297)
T cd06659          25 NYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGA  104 (297)
T ss_pred             hhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCC
Confidence            344799999999999986 4688999999976544455678999999999999999999999999999999999999999


Q ss_pred             hhHHhhcCC
Q 017984          352 LLDNLFDKM  360 (363)
Q Consensus       352 L~~~l~~~~  360 (363)
                      |.+++....
T Consensus       105 L~~~~~~~~  113 (297)
T cd06659         105 LTDIVSQTR  113 (297)
T ss_pred             HHHHHhhcC
Confidence            999876543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.09  E-value=3.7e-10  Score=103.69  Aligned_cols=92  Identities=24%  Similarity=0.351  Sum_probs=77.8

Q ss_pred             ccCCCcCceecccCceEEEEEEc--------CCCCEEEEEEeccC-ChhhHHHHHHHHHHHhcC-CCCCccceeeEEEeC
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL--------PGGEAVAVKRLFYN-TTQWVDHFFNEVNLISGI-NHKNLVKLLGCSITG  337 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~--------~~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~  337 (363)
                      .++|...+.||+|+||.||++..        .++..||+|.+... ......++.+|+.++..+ +||||+++++++...
T Consensus        14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~   93 (304)
T cd05101          14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD   93 (304)
T ss_pred             HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence            45677889999999999999973        12457999988643 234456799999999999 899999999999999


Q ss_pred             CeeEEEEEccCCCChhHHhhcC
Q 017984          338 PESLLVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       338 ~~~~lv~Ey~~~gsL~~~l~~~  359 (363)
                      ...++||||+++|+|.++|.+.
T Consensus        94 ~~~~lv~e~~~~~~L~~~l~~~  115 (304)
T cd05101          94 GPLYVIVEYASKGNLREYLRAR  115 (304)
T ss_pred             CceEEEEecCCCCcHHHHHHhc
Confidence            9999999999999999999764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.09  E-value=6.3e-10  Score=102.69  Aligned_cols=90  Identities=24%  Similarity=0.327  Sum_probs=78.9

Q ss_pred             CCCcCceecccCceEEEEEEcC-CCCEEEEEEeccCCh---hhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEE
Q 017984          270 YFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYNTT---QWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYE  345 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  345 (363)
                      +|...+.||+|++|.||++... +++.+|+|.+.....   ...+.+.+|++++..++||||+++++.+......++|||
T Consensus         2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e   81 (316)
T cd05574           2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMD   81 (316)
T ss_pred             ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEE
Confidence            5778889999999999999974 488999999975422   245679999999999999999999999999999999999


Q ss_pred             ccCCCChhHHhhcC
Q 017984          346 FVPNQSLLDNLFDK  359 (363)
Q Consensus       346 y~~~gsL~~~l~~~  359 (363)
                      |+++++|.+++...
T Consensus        82 ~~~~~~L~~~~~~~   95 (316)
T cd05574          82 YCPGGELFRLLQRQ   95 (316)
T ss_pred             ecCCCCHHHHHHhC
Confidence            99999999998753

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.09  E-value=3e-10  Score=103.79  Aligned_cols=90  Identities=29%  Similarity=0.431  Sum_probs=77.6

Q ss_pred             CCcCceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEccCC
Q 017984          271 FHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPN  349 (363)
Q Consensus       271 ~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~~~  349 (363)
                      +.....||+|+||.||++.. .++..||||.+........+.+.+|+.++..++|+||+++++.+..++..++||||+++
T Consensus        24 ~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~  103 (292)
T cd06658          24 LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEG  103 (292)
T ss_pred             HhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCC
Confidence            33456799999999999986 45889999998765555567799999999999999999999999999999999999999


Q ss_pred             CChhHHhhcCC
Q 017984          350 QSLLDNLFDKM  360 (363)
Q Consensus       350 gsL~~~l~~~~  360 (363)
                      ++|.+++....
T Consensus       104 ~~L~~~~~~~~  114 (292)
T cd06658         104 GALTDIVTHTR  114 (292)
T ss_pred             CcHHHHHhcCC
Confidence            99999886543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.08  E-value=1e-09  Score=98.72  Aligned_cols=91  Identities=25%  Similarity=0.418  Sum_probs=76.4

Q ss_pred             cCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC-----ChhhHHHHHHHHHHHhcCCCCCccceeeEEEe--CCee
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN-----TTQWVDHFFNEVNLISGINHKNLVKLLGCSIT--GPES  340 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~  340 (363)
                      .+|...+.||+|+||.||++.. .++..+++|.+...     ..+....+.+|+.+++.++||||+++++++..  ....
T Consensus         2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (266)
T cd06651           2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL   81 (266)
T ss_pred             CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence            3688899999999999999986 45889999988643     12334568999999999999999999998875  3578


Q ss_pred             EEEEEccCCCChhHHhhcC
Q 017984          341 LLVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       341 ~lv~Ey~~~gsL~~~l~~~  359 (363)
                      ++++||+++++|.+++.+.
T Consensus        82 ~l~~e~~~~~~L~~~l~~~  100 (266)
T cd06651          82 TIFMEYMPGGSVKDQLKAY  100 (266)
T ss_pred             EEEEeCCCCCcHHHHHHHc
Confidence            8999999999999998754

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.08  E-value=6.2e-10  Score=100.97  Aligned_cols=89  Identities=26%  Similarity=0.410  Sum_probs=77.5

Q ss_pred             CCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCC--hhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEc
Q 017984          270 YFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNT--TQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      +|...+.||+|++|.||++.. .+|+.|++|++....  ......+.+|+.++++++||||+++++++..+...++||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~   80 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY   80 (286)
T ss_pred             CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence            366788999999999999996 468899999997543  33456799999999999999999999999999999999999


Q ss_pred             cCCCChhHHhhcC
Q 017984          347 VPNQSLLDNLFDK  359 (363)
Q Consensus       347 ~~~gsL~~~l~~~  359 (363)
                      + +++|.+++...
T Consensus        81 ~-~~~L~~~~~~~   92 (286)
T cd07832          81 M-PSDLSEVLRDE   92 (286)
T ss_pred             c-CCCHHHHHHhc
Confidence            9 99999998653

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.08  E-value=7.8e-10  Score=99.15  Aligned_cols=91  Identities=31%  Similarity=0.436  Sum_probs=79.5

Q ss_pred             cCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEc
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      ++|+..+.||.|+||.||++.. .++..+++|++... .......+.+|+.+++.++|+||+++++.+..++..++||||
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~   80 (267)
T cd06610           1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY   80 (267)
T ss_pred             CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence            4678889999999999999996 45789999998753 233567799999999999999999999999999999999999


Q ss_pred             cCCCChhHHhhcC
Q 017984          347 VPNQSLLDNLFDK  359 (363)
Q Consensus       347 ~~~gsL~~~l~~~  359 (363)
                      +++++|.+++...
T Consensus        81 ~~~~~l~~~~~~~   93 (267)
T cd06610          81 LSGGSLLDIMKSS   93 (267)
T ss_pred             cCCCcHHHHHHHh
Confidence            9999999998753

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.08  E-value=4.8e-10  Score=102.17  Aligned_cols=90  Identities=27%  Similarity=0.379  Sum_probs=76.5

Q ss_pred             cCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEc
Q 017984          269 NYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYNT-TQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      ++|...+.||+|++|.||++... +++.||+|.+.... ......+.+|++++++++|+||+++++++...+..++||||
T Consensus         5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (291)
T cd07844           5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY   84 (291)
T ss_pred             cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence            56788899999999999999964 68899999987532 22234578999999999999999999999999999999999


Q ss_pred             cCCCChhHHhhcC
Q 017984          347 VPNQSLLDNLFDK  359 (363)
Q Consensus       347 ~~~gsL~~~l~~~  359 (363)
                      +++ +|.+++.+.
T Consensus        85 ~~~-~L~~~~~~~   96 (291)
T cd07844          85 LDT-DLKQYMDDC   96 (291)
T ss_pred             CCC-CHHHHHHhC
Confidence            985 999988654

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.08  E-value=3.8e-10  Score=102.24  Aligned_cols=93  Identities=24%  Similarity=0.339  Sum_probs=78.8

Q ss_pred             hccCCCcCceecccCceEEEEEEcCC-----CCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEe-CCe
Q 017984          267 ATNYFHESNKLGQGGSGSVYKGTLPG-----GEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSIT-GPE  339 (363)
Q Consensus       267 ~~~~~~~~~~lg~G~~g~Vy~~~~~~-----g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~  339 (363)
                      ..++|...+.||+|+||.||+|...+     +..|++|++... .....+.+.+|+.++.+++||||+++++++.. +..
T Consensus         4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~   83 (280)
T cd05043           4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEP   83 (280)
T ss_pred             chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence            34678888999999999999999754     678999998754 34446679999999999999999999998776 567


Q ss_pred             eEEEEEccCCCChhHHhhcC
Q 017984          340 SLLVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       340 ~~lv~Ey~~~gsL~~~l~~~  359 (363)
                      .++++||+++|+|.++|...
T Consensus        84 ~~~~~~~~~~~~L~~~l~~~  103 (280)
T cd05043          84 PFVLYPYMNWGNLKLFLQQC  103 (280)
T ss_pred             CEEEEEcCCCCcHHHHHHhc
Confidence            89999999999999998653

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.08  E-value=5.5e-10  Score=103.31  Aligned_cols=85  Identities=27%  Similarity=0.286  Sum_probs=71.3

Q ss_pred             ceecccCceEEEEEEcC-CCCEEEEEEeccC---ChhhHHHHHHHHHHHhcC-CCCCccceeeEEEeCCeeEEEEEccCC
Q 017984          275 NKLGQGGSGSVYKGTLP-GGEAVAVKRLFYN---TTQWVDHFFNEVNLISGI-NHKNLVKLLGCSITGPESLLVYEFVPN  349 (363)
Q Consensus       275 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~Ey~~~  349 (363)
                      +.||+|+||.||++... +|+.||+|.++..   .......+..|..++..+ +||||+++++++...+..+|||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~   80 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence            46999999999999974 5889999999753   123345577888888755 899999999999999999999999999


Q ss_pred             CChhHHhhcC
Q 017984          350 QSLLDNLFDK  359 (363)
Q Consensus       350 gsL~~~l~~~  359 (363)
                      |+|.+++..+
T Consensus        81 g~L~~~i~~~   90 (316)
T cd05620          81 GDLMFHIQDK   90 (316)
T ss_pred             CcHHHHHHHc
Confidence            9999988764

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.08  E-value=7.8e-10  Score=100.38  Aligned_cols=91  Identities=33%  Similarity=0.416  Sum_probs=74.9

Q ss_pred             CCcCceecccCceEEEEEEc-----CCCCEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCccceeeEEEeC--CeeEE
Q 017984          271 FHESNKLGQGGSGSVYKGTL-----PGGEAVAVKRLFYNT-TQWVDHFFNEVNLISGINHKNLVKLLGCSITG--PESLL  342 (363)
Q Consensus       271 ~~~~~~lg~G~~g~Vy~~~~-----~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l  342 (363)
                      |...+.||+|+||.||++..     .+++.||+|.++... ......|.+|++++++++||||+++++++...  ...++
T Consensus         6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   85 (283)
T cd05080           6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQL   85 (283)
T ss_pred             ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEE
Confidence            36778999999999988652     357789999997542 33456789999999999999999999987653  46899


Q ss_pred             EEEccCCCChhHHhhcCCC
Q 017984          343 VYEFVPNQSLLDNLFDKML  361 (363)
Q Consensus       343 v~Ey~~~gsL~~~l~~~~~  361 (363)
                      ||||+++|+|.+++.+...
T Consensus        86 v~e~~~~~~l~~~~~~~~l  104 (283)
T cd05080          86 IMEYVPLGSLRDYLPKHKL  104 (283)
T ss_pred             EecCCCCCCHHHHHHHcCC
Confidence            9999999999999876543

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.08  E-value=4.3e-10  Score=101.28  Aligned_cols=90  Identities=27%  Similarity=0.354  Sum_probs=75.2

Q ss_pred             cCCCcCceecccCceEEEEEEcCC----CCEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTLPG----GEAVAVKRLFYNT-TQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLV  343 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~~~----g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  343 (363)
                      ++|...+.||+|+||.||+|...+    ...|++|...... ....+.|.+|+.++++++||||+++++++.. +..++|
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv   84 (270)
T cd05056           6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIV   84 (270)
T ss_pred             hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEE
Confidence            457788899999999999998633    2468999887553 4556789999999999999999999998765 567899


Q ss_pred             EEccCCCChhHHhhcC
Q 017984          344 YEFVPNQSLLDNLFDK  359 (363)
Q Consensus       344 ~Ey~~~gsL~~~l~~~  359 (363)
                      |||+++|+|.+++...
T Consensus        85 ~e~~~~~~L~~~l~~~  100 (270)
T cd05056          85 MELAPLGELRSYLQVN  100 (270)
T ss_pred             EEcCCCCcHHHHHHhC
Confidence            9999999999999753

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.08  E-value=5.7e-10  Score=99.40  Aligned_cols=89  Identities=36%  Similarity=0.581  Sum_probs=77.0

Q ss_pred             CcCceecccCceEEEEEEcCC-----CCEEEEEEeccCChh-hHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEE
Q 017984          272 HESNKLGQGGSGSVYKGTLPG-----GEAVAVKRLFYNTTQ-WVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYE  345 (363)
Q Consensus       272 ~~~~~lg~G~~g~Vy~~~~~~-----g~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  345 (363)
                      ...+.||+|+||.||++...+     +..||+|.+...... ..+.+.+|++++..++|+||+++++++...+..+++||
T Consensus         2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e   81 (258)
T smart00219        2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVME   81 (258)
T ss_pred             cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEe
Confidence            456789999999999999643     378999999765332 56789999999999999999999999999999999999


Q ss_pred             ccCCCChhHHhhcCC
Q 017984          346 FVPNQSLLDNLFDKM  360 (363)
Q Consensus       346 y~~~gsL~~~l~~~~  360 (363)
                      |+++++|.+++....
T Consensus        82 ~~~~~~l~~~~~~~~   96 (258)
T smart00219       82 YMEGGDLLDYLRKNR   96 (258)
T ss_pred             ccCCCCHHHHHHhhh
Confidence            999999999987543

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.07  E-value=6.3e-10  Score=105.32  Aligned_cols=89  Identities=20%  Similarity=0.260  Sum_probs=74.9

Q ss_pred             CCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCC-----eeE
Q 017984          270 YFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGP-----ESL  341 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~  341 (363)
                      +|+..+.||+|+||.||++.. .+++.||+|++...  .....+++.+|++++..++||||+++++++...+     ..+
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~   80 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY   80 (372)
T ss_pred             CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence            467889999999999999996 46899999998643  3334567899999999999999999999998776     789


Q ss_pred             EEEEccCCCChhHHhhcC
Q 017984          342 LVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       342 lv~Ey~~~gsL~~~l~~~  359 (363)
                      +|+||++ ++|.+++..+
T Consensus        81 lv~e~~~-~~l~~~~~~~   97 (372)
T cd07853          81 VVTELMQ-SDLHKIIVSP   97 (372)
T ss_pred             EEeeccc-cCHHHHHhcC
Confidence            9999997 5888877654

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.07  E-value=3.2e-10  Score=102.96  Aligned_cols=90  Identities=24%  Similarity=0.334  Sum_probs=77.0

Q ss_pred             cCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYE  345 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  345 (363)
                      ++|...+.||+|+||.||++... +++.+|+|++...  .....+.+.+|++++..++||||+++++++..++..++|||
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   80 (286)
T cd07846           1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE   80 (286)
T ss_pred             CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence            35778899999999999999975 5889999988643  22234568899999999999999999999999999999999


Q ss_pred             ccCCCChhHHhhc
Q 017984          346 FVPNQSLLDNLFD  358 (363)
Q Consensus       346 y~~~gsL~~~l~~  358 (363)
                      |+++++|.+++..
T Consensus        81 ~~~~~~l~~~~~~   93 (286)
T cd07846          81 FVDHTVLDDLEKY   93 (286)
T ss_pred             cCCccHHHHHHhc
Confidence            9999998887654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=99.07  E-value=8.7e-11  Score=105.48  Aligned_cols=84  Identities=25%  Similarity=0.418  Sum_probs=68.3

Q ss_pred             CCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCC-----eeEEE
Q 017984          270 YFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGP-----ESLLV  343 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~lv  343 (363)
                      .|...+++|.|+||.||+|.+ .+++.||||+.....+.    --+|+++|++++|||||+|+-++....     .+-||
T Consensus        25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~----knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlV  100 (364)
T KOG0658|consen   25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY----KNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLV  100 (364)
T ss_pred             EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCc----CcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHH
Confidence            356778999999999999996 45789999998654332    247899999999999999998886532     34589


Q ss_pred             EEccCCCChhHHhhc
Q 017984          344 YEFVPNQSLLDNLFD  358 (363)
Q Consensus       344 ~Ey~~~gsL~~~l~~  358 (363)
                      |||||. +|.++++.
T Consensus       101 leymP~-tL~~~~r~  114 (364)
T KOG0658|consen  101 LEYMPE-TLYRVIRH  114 (364)
T ss_pred             HHhchH-HHHHHHHH
Confidence            999998 99999883

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.07  E-value=5.3e-10  Score=100.25  Aligned_cols=90  Identities=21%  Similarity=0.268  Sum_probs=79.1

Q ss_pred             CCCcCceecccCceEEEEEEcC-CCCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEcc
Q 017984          270 YFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFV  347 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~  347 (363)
                      +|...+.||+|++|.||++... +++.+++|.+... ......++.+|++++++++||||+++++.+......+|++||+
T Consensus         2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~   81 (265)
T cd06605           2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYM   81 (265)
T ss_pred             cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEec
Confidence            5667788999999999999974 5889999998764 3345567999999999999999999999999999999999999


Q ss_pred             CCCChhHHhhcC
Q 017984          348 PNQSLLDNLFDK  359 (363)
Q Consensus       348 ~~gsL~~~l~~~  359 (363)
                      ++++|.+++...
T Consensus        82 ~~~~L~~~~~~~   93 (265)
T cd06605          82 DGGSLDKILKEV   93 (265)
T ss_pred             CCCcHHHHHHHc
Confidence            999999998754

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.07  E-value=5.8e-10  Score=99.93  Aligned_cols=89  Identities=33%  Similarity=0.427  Sum_probs=75.2

Q ss_pred             cCCCcCceecccCceEEEEEEcCCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEccC
Q 017984          269 NYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVP  348 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~~  348 (363)
                      ++|.....||+|++|.||++...++..+|+|.+.... ...+.|.+|+.++++++|||++++++++. .+..++||||++
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~   83 (260)
T cd05069           6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMG   83 (260)
T ss_pred             HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCC
Confidence            4577788999999999999998777789999886543 23467899999999999999999998875 456899999999


Q ss_pred             CCChhHHhhcC
Q 017984          349 NQSLLDNLFDK  359 (363)
Q Consensus       349 ~gsL~~~l~~~  359 (363)
                      +|+|.+++...
T Consensus        84 ~~~L~~~~~~~   94 (260)
T cd05069          84 KGSLLDFLKEG   94 (260)
T ss_pred             CCCHHHHHhhC
Confidence            99999999753

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.07  E-value=7.5e-10  Score=100.28  Aligned_cols=90  Identities=29%  Similarity=0.501  Sum_probs=76.0

Q ss_pred             cCCCcCceecccCceEEEEEEcC-CCC----EEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTLP-GGE----AVAVKRLFYNT-TQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLL  342 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~----~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  342 (363)
                      .+|...+.||+|+||.||++... +|.    .+|+|.+.... .....++.+|+.++.+++||||+++++++.. ...++
T Consensus         7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~   85 (279)
T cd05057           7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL   85 (279)
T ss_pred             HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence            45677889999999999999863 233    68999887543 3445679999999999999999999999887 78899


Q ss_pred             EEEccCCCChhHHhhcC
Q 017984          343 VYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       343 v~Ey~~~gsL~~~l~~~  359 (363)
                      ||||+++|+|.++|..+
T Consensus        86 v~e~~~~g~L~~~l~~~  102 (279)
T cd05057          86 ITQLMPLGCLLDYVRNH  102 (279)
T ss_pred             EEecCCCCcHHHHHHhc
Confidence            99999999999999764

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=99.07  E-value=1.4e-10  Score=108.90  Aligned_cols=93  Identities=25%  Similarity=0.274  Sum_probs=78.9

Q ss_pred             hccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC---ChhhHHHHHHHHHHHhcC-CCCCccceeeEEEeCCeeE
Q 017984          267 ATNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN---TTQWVDHFFNEVNLISGI-NHKNLVKLLGCSITGPESL  341 (363)
Q Consensus       267 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~  341 (363)
                      -..+|..++.||+|+|++|++++. ..++++|||++.+.   .....+-...|-.+|.+| .||.|++|+-.|.++..+|
T Consensus        71 ~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLY  150 (604)
T KOG0592|consen   71 TPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLY  150 (604)
T ss_pred             ChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceE
Confidence            346788899999999999999995 56899999999653   222233467888899999 7999999999999999999


Q ss_pred             EEEEccCCCChhHHhhcC
Q 017984          342 LVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       342 lv~Ey~~~gsL~~~l~~~  359 (363)
                      +|+||.++|+|.++|.+.
T Consensus       151 FvLe~A~nGdll~~i~K~  168 (604)
T KOG0592|consen  151 FVLEYAPNGDLLDLIKKY  168 (604)
T ss_pred             EEEEecCCCcHHHHHHHh
Confidence            999999999999999764

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.07  E-value=5.2e-10  Score=99.90  Aligned_cols=85  Identities=35%  Similarity=0.562  Sum_probs=73.4

Q ss_pred             ceecccCceEEEEEEcCC--C--CEEEEEEeccCCh-hhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEccCC
Q 017984          275 NKLGQGGSGSVYKGTLPG--G--EAVAVKRLFYNTT-QWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPN  349 (363)
Q Consensus       275 ~~lg~G~~g~Vy~~~~~~--g--~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~~~  349 (363)
                      +.||+|++|.||++.+.+  +  ..||+|.+..... ...+.|.+|+.++.+++||||+++++.+.. ...++||||+++
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~   79 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL   79 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence            368999999999998632  3  3699999987644 567789999999999999999999999888 889999999999


Q ss_pred             CChhHHhhcCC
Q 017984          350 QSLLDNLFDKM  360 (363)
Q Consensus       350 gsL~~~l~~~~  360 (363)
                      |+|.+++.++.
T Consensus        80 ~~L~~~l~~~~   90 (257)
T cd05040          80 GSLLDRLRKDA   90 (257)
T ss_pred             CcHHHHHHhcc
Confidence            99999997653

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.07  E-value=6.9e-10  Score=99.37  Aligned_cols=83  Identities=25%  Similarity=0.367  Sum_probs=69.2

Q ss_pred             eecccCceEEEEEEcC---CCCEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEccCCCC
Q 017984          276 KLGQGGSGSVYKGTLP---GGEAVAVKRLFYNT-TQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQS  351 (363)
Q Consensus       276 ~lg~G~~g~Vy~~~~~---~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~~~gs  351 (363)
                      .||+|+||.||+|.+.   ++..||+|++.... ....++|.+|+.++++++||||+++++++. .+..++||||+++|+
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~   80 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGP   80 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCC
Confidence            3899999999999753   35579999987543 334567999999999999999999999875 457899999999999


Q ss_pred             hhHHhhcC
Q 017984          352 LLDNLFDK  359 (363)
Q Consensus       352 L~~~l~~~  359 (363)
                      |.+++..+
T Consensus        81 L~~~l~~~   88 (257)
T cd05115          81 LNKFLSGK   88 (257)
T ss_pred             HHHHHHhC
Confidence            99998643

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.06  E-value=3.7e-10  Score=104.53  Aligned_cols=90  Identities=21%  Similarity=0.255  Sum_probs=74.0

Q ss_pred             HHhccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCCh--------------hhHHHHHHHHHHHhcCCCCCccc
Q 017984          265 EKATNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTT--------------QWVDHFFNEVNLISGINHKNLVK  329 (363)
Q Consensus       265 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~--------------~~~~~~~~E~~~l~~l~h~niv~  329 (363)
                      ....+.|.+...||+|.||.|-++.. -+++.||||++.+...              ...+...+||.+|++++|||||+
T Consensus        93 ~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~  172 (576)
T KOG0585|consen   93 RKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVK  172 (576)
T ss_pred             ceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeE
Confidence            34457788999999999999999985 4689999999964211              11356899999999999999999


Q ss_pred             eeeEEEeC--CeeEEEEEccCCCChhH
Q 017984          330 LLGCSITG--PESLLVYEFVPNQSLLD  354 (363)
Q Consensus       330 l~~~~~~~--~~~~lv~Ey~~~gsL~~  354 (363)
                      |+.+..+.  +.+|||+|||..|.+..
T Consensus       173 LiEvLDDP~s~~~YlVley~s~G~v~w  199 (576)
T KOG0585|consen  173 LIEVLDDPESDKLYLVLEYCSKGEVKW  199 (576)
T ss_pred             EEEeecCcccCceEEEEEeccCCcccc
Confidence            99998764  58999999999988754

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.06  E-value=6.9e-10  Score=103.36  Aligned_cols=88  Identities=18%  Similarity=0.317  Sum_probs=72.5

Q ss_pred             CCcCceecccCceEEEEEEc-CCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeC-----CeeEE
Q 017984          271 FHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITG-----PESLL  342 (363)
Q Consensus       271 ~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~~l  342 (363)
                      |...+.||+|+||.||++.. .+++.||||++...  .......+.+|+.++++++||||+++++++...     ...++
T Consensus         2 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~l   81 (338)
T cd07859           2 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYV   81 (338)
T ss_pred             eEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEE
Confidence            66788999999999999996 46899999998642  223345689999999999999999999987643     35899


Q ss_pred             EEEccCCCChhHHhhcC
Q 017984          343 VYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       343 v~Ey~~~gsL~~~l~~~  359 (363)
                      ||||++ ++|.+++...
T Consensus        82 v~e~~~-~~L~~~l~~~   97 (338)
T cd07859          82 VFELME-SDLHQVIKAN   97 (338)
T ss_pred             EEecCC-CCHHHHHHhc
Confidence            999995 6899888654

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.06  E-value=9.4e-10  Score=102.14  Aligned_cols=86  Identities=22%  Similarity=0.243  Sum_probs=69.1

Q ss_pred             ceecccCceEEEEEEcC-CCCEEEEEEeccCC---hhhHHHHHHHH-HHHhcCCCCCccceeeEEEeCCeeEEEEEccCC
Q 017984          275 NKLGQGGSGSVYKGTLP-GGEAVAVKRLFYNT---TQWVDHFFNEV-NLISGINHKNLVKLLGCSITGPESLLVYEFVPN  349 (363)
Q Consensus       275 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~~E~-~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~~~  349 (363)
                      +.||+|+||.||++... +++.+|+|++....   ......+..|. .++..++||||+++++.+...+..++||||+++
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING   80 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence            36999999999999964 57889999997431   22233445554 456788999999999999999999999999999


Q ss_pred             CChhHHhhcCC
Q 017984          350 QSLLDNLFDKM  360 (363)
Q Consensus       350 gsL~~~l~~~~  360 (363)
                      |+|.+++....
T Consensus        81 ~~L~~~~~~~~   91 (325)
T cd05602          81 GELFYHLQRER   91 (325)
T ss_pred             CcHHHHHHhcC
Confidence            99999987643

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.06  E-value=1e-09  Score=100.37  Aligned_cols=86  Identities=30%  Similarity=0.478  Sum_probs=75.9

Q ss_pred             ceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEccCCCChh
Q 017984          275 NKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQSLL  353 (363)
Q Consensus       275 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~~~gsL~  353 (363)
                      .+||+|+||.||++.. .+++.||+|.+..........+.+|+.+++.++|+||+++++.+..++..++||||+++++|.
T Consensus        26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~  105 (292)
T cd06657          26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT  105 (292)
T ss_pred             HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHH
Confidence            5799999999999986 568899999987555555667999999999999999999999999999999999999999999


Q ss_pred             HHhhcCC
Q 017984          354 DNLFDKM  360 (363)
Q Consensus       354 ~~l~~~~  360 (363)
                      +++....
T Consensus       106 ~~~~~~~  112 (292)
T cd06657         106 DIVTHTR  112 (292)
T ss_pred             HHHhcCC
Confidence            9876543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.06  E-value=1.6e-10  Score=107.79  Aligned_cols=91  Identities=26%  Similarity=0.327  Sum_probs=79.0

Q ss_pred             cCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYE  345 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  345 (363)
                      .-|.+++.||+|.|..|-.+.+ -+|..||||++.+.  +......+..|++.|+-++|||||+|+.+..++..+|||+|
T Consensus        18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLE   97 (864)
T KOG4717|consen   18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILE   97 (864)
T ss_pred             eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEE
Confidence            4467788999999999988774 46999999999864  33344568999999999999999999999999999999999


Q ss_pred             ccCCCChhHHhhcC
Q 017984          346 FVPNQSLLDNLFDK  359 (363)
Q Consensus       346 y~~~gsL~~~l~~~  359 (363)
                      .-.+|+|++||.++
T Consensus        98 LGD~GDl~DyImKH  111 (864)
T KOG4717|consen   98 LGDGGDLFDYIMKH  111 (864)
T ss_pred             ecCCchHHHHHHhh
Confidence            99999999999765

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.06  E-value=7.5e-10  Score=99.83  Aligned_cols=85  Identities=27%  Similarity=0.432  Sum_probs=72.3

Q ss_pred             ceecccCceEEEEEEcCC-CC--EEEEEEeccC-ChhhHHHHHHHHHHHhcC-CCCCccceeeEEEeCCeeEEEEEccCC
Q 017984          275 NKLGQGGSGSVYKGTLPG-GE--AVAVKRLFYN-TTQWVDHFFNEVNLISGI-NHKNLVKLLGCSITGPESLLVYEFVPN  349 (363)
Q Consensus       275 ~~lg~G~~g~Vy~~~~~~-g~--~vavK~l~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~Ey~~~  349 (363)
                      +.||+|+||.||++.+.+ +.  .+++|.++.. .....+.+.+|++++.++ +||||+++++++...+..++||||+++
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH   80 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence            368999999999999743 43  5688888743 344556799999999999 799999999999999999999999999


Q ss_pred             CChhHHhhcC
Q 017984          350 QSLLDNLFDK  359 (363)
Q Consensus       350 gsL~~~l~~~  359 (363)
                      |+|.++|.++
T Consensus        81 ~~L~~~i~~~   90 (270)
T cd05047          81 GNLLDFLRKS   90 (270)
T ss_pred             CcHHHHHHhc
Confidence            9999999754

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.06  E-value=7.6e-10  Score=100.34  Aligned_cols=89  Identities=28%  Similarity=0.464  Sum_probs=76.2

Q ss_pred             CCCcCceecccCceEEEEEEcC-CCCEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEcc
Q 017984          270 YFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYNT-TQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFV  347 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~  347 (363)
                      +|+..+.||+|++|.||++... +|+.||+|.+.... ......+.+|+.++++++||||+++++++...+..+|||||+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   80 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM   80 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence            4678889999999999999974 58899999997543 233456889999999999999999999999999999999999


Q ss_pred             CCCChhHHhhcC
Q 017984          348 PNQSLLDNLFDK  359 (363)
Q Consensus       348 ~~gsL~~~l~~~  359 (363)
                      ++ +|.+++...
T Consensus        81 ~~-~l~~~~~~~   91 (284)
T cd07836          81 DK-DLKKYMDTH   91 (284)
T ss_pred             Cc-cHHHHHHhc
Confidence            85 898887653

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.06  E-value=5.7e-10  Score=101.71  Aligned_cols=98  Identities=28%  Similarity=0.341  Sum_probs=82.4

Q ss_pred             cchHHHHHhccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcC-CCCCccceeeEEEe
Q 017984          259 FSYETLEKATNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGI-NHKNLVKLLGCSIT  336 (363)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~  336 (363)
                      +...++..++++|...+.||+|+||.||++.. .+++.+|+|.+.... .....+.+|+.++.++ +||||+++++++..
T Consensus        12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~   90 (291)
T cd06639          12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYK   90 (291)
T ss_pred             hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEe
Confidence            45567777889999999999999999999996 568899999986532 2245688999999999 79999999999875


Q ss_pred             C-----CeeEEEEEccCCCChhHHhh
Q 017984          337 G-----PESLLVYEFVPNQSLLDNLF  357 (363)
Q Consensus       337 ~-----~~~~lv~Ey~~~gsL~~~l~  357 (363)
                      .     ...++||||+++|+|.+++.
T Consensus        91 ~~~~~~~~~~lv~ey~~~~sL~~~~~  116 (291)
T cd06639          91 ADKLVGGQLWLVLELCNGGSVTELVK  116 (291)
T ss_pred             ccccCCCeeEEEEEECCCCcHHHHHH
Confidence            4     35899999999999999875

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.05  E-value=8.9e-11  Score=95.54  Aligned_cols=85  Identities=27%  Similarity=0.440  Sum_probs=71.1

Q ss_pred             CCcCceecccCceEEEEEEc-CCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEcc
Q 017984          271 FHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFV  347 (363)
Q Consensus       271 ~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~  347 (363)
                      |...++||+|.||+|||+.. .+++.||+|+++..  +..-....++||.+++.++|+|||++++....+..+-||+|||
T Consensus         4 ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~c   83 (292)
T KOG0662|consen    4 YDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC   83 (292)
T ss_pred             hHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHHh
Confidence            44566899999999999995 45889999999754  3333456899999999999999999999999999999999999


Q ss_pred             CCCChhHHh
Q 017984          348 PNQSLLDNL  356 (363)
Q Consensus       348 ~~gsL~~~l  356 (363)
                      .. +|..|.
T Consensus        84 dq-dlkkyf   91 (292)
T KOG0662|consen   84 DQ-DLKKYF   91 (292)
T ss_pred             hH-HHHHHH
Confidence            54 666654

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.05  E-value=9.1e-10  Score=100.31  Aligned_cols=91  Identities=23%  Similarity=0.264  Sum_probs=76.9

Q ss_pred             CCCcCceecccCceEEEEEEc----CCCCEEEEEEeccCC----hhhHHHHHHHHHHHhcC-CCCCccceeeEEEeCCee
Q 017984          270 YFHESNKLGQGGSGSVYKGTL----PGGEAVAVKRLFYNT----TQWVDHFFNEVNLISGI-NHKNLVKLLGCSITGPES  340 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~~----~~g~~vavK~l~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~  340 (363)
                      +|+..+.||+|+||.||++..    .+|+.||+|++....    ....+.+.+|+.++.++ +|+||+++++++..+...
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL   80 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence            366788999999999999885    368899999997532    22345688999999999 599999999999999999


Q ss_pred             EEEEEccCCCChhHHhhcCC
Q 017984          341 LLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       341 ~lv~Ey~~~gsL~~~l~~~~  360 (363)
                      ++||||+++++|.++|....
T Consensus        81 ~lv~e~~~~~~L~~~l~~~~  100 (290)
T cd05613          81 HLILDYINGGELFTHLSQRE  100 (290)
T ss_pred             EEEEecCCCCcHHHHHHHcC
Confidence            99999999999999987543

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.05  E-value=1.2e-09  Score=97.15  Aligned_cols=90  Identities=26%  Similarity=0.346  Sum_probs=79.1

Q ss_pred             CCCcCceecccCceEEEEEEcC-CCCEEEEEEeccCC--hhhHHHHHHHHHHHhcCCCCCccceeeEEEeC--CeeEEEE
Q 017984          270 YFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYNT--TQWVDHFFNEVNLISGINHKNLVKLLGCSITG--PESLLVY  344 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv~  344 (363)
                      +|+..+.||+|++|.||++... +++.+++|.+....  ....+.+.+|+.++++++||||+++++.+...  ...++|+
T Consensus         1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~   80 (260)
T cd06606           1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL   80 (260)
T ss_pred             CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence            3667789999999999999975 68899999987543  24567899999999999999999999999988  8999999


Q ss_pred             EccCCCChhHHhhcC
Q 017984          345 EFVPNQSLLDNLFDK  359 (363)
Q Consensus       345 Ey~~~gsL~~~l~~~  359 (363)
                      ||+++++|.+++.+.
T Consensus        81 e~~~~~~L~~~~~~~   95 (260)
T cd06606          81 EYVSGGSLSSLLKKF   95 (260)
T ss_pred             EecCCCcHHHHHHHc
Confidence            999999999998765

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.05  E-value=1.5e-09  Score=97.48  Aligned_cols=91  Identities=25%  Similarity=0.414  Sum_probs=76.4

Q ss_pred             cCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC-----ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeC--Cee
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN-----TTQWVDHFFNEVNLISGINHKNLVKLLGCSITG--PES  340 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~  340 (363)
                      .+|...+.||+|+||.||++.. .+++.+|+|.+...     ..+....|.+|++++++++|+||+++++++...  ...
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL   81 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence            4688899999999999999986 45889999987532     223456799999999999999999999988764  468


Q ss_pred             EEEEEccCCCChhHHhhcC
Q 017984          341 LLVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       341 ~lv~Ey~~~gsL~~~l~~~  359 (363)
                      ++++||+++++|.+++...
T Consensus        82 ~~v~e~~~~~~L~~~~~~~  100 (264)
T cd06653          82 SIFVEYMPGGSIKDQLKAY  100 (264)
T ss_pred             EEEEEeCCCCcHHHHHHHc
Confidence            8999999999999988753

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.05  E-value=1e-09  Score=98.29  Aligned_cols=84  Identities=25%  Similarity=0.275  Sum_probs=73.3

Q ss_pred             ecccCceEEEEEEcC-CCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEccCCCCh
Q 017984          277 LGQGGSGSVYKGTLP-GGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQSL  352 (363)
Q Consensus       277 lg~G~~g~Vy~~~~~-~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~~~gsL  352 (363)
                      ||.|++|.||++... +++.+++|.+...   .....+.+.+|+.+++.++||||+++++.+..+...++|+||+++++|
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL   80 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence            689999999999974 4889999999753   223456799999999999999999999999999999999999999999


Q ss_pred             hHHhhcCC
Q 017984          353 LDNLFDKM  360 (363)
Q Consensus       353 ~~~l~~~~  360 (363)
                      .++|.+..
T Consensus        81 ~~~l~~~~   88 (262)
T cd05572          81 WTILRDRG   88 (262)
T ss_pred             HHHHhhcC
Confidence            99997654

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.05  E-value=9.9e-10  Score=98.23  Aligned_cols=83  Identities=27%  Similarity=0.388  Sum_probs=70.0

Q ss_pred             eecccCceEEEEEEc---CCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEccCCC
Q 017984          276 KLGQGGSGSVYKGTL---PGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQ  350 (363)
Q Consensus       276 ~lg~G~~g~Vy~~~~---~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~~~g  350 (363)
                      .||+|+||.||+|.+   .++..+|+|+++..  .....++|.+|+.++..++||||+++++++. .+..++||||+++|
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~   80 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG   80 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence            589999999999975   35778999998643  3344678999999999999999999999875 45678999999999


Q ss_pred             ChhHHhhcC
Q 017984          351 SLLDNLFDK  359 (363)
Q Consensus       351 sL~~~l~~~  359 (363)
                      +|.+++...
T Consensus        81 ~L~~~l~~~   89 (257)
T cd05116          81 PLNKFLQKN   89 (257)
T ss_pred             cHHHHHHhc
Confidence            999998654

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.05  E-value=1.9e-09  Score=95.81  Aligned_cols=90  Identities=26%  Similarity=0.448  Sum_probs=78.9

Q ss_pred             CCCcCceecccCceEEEEEEcC-CCCEEEEEEeccCCh--hhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEc
Q 017984          270 YFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYNTT--QWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      +|...+.||+|.+|.||++... +++.+++|.+.....  ...+.+.+|++++.+++|||++++++++...+..+++|||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   80 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY   80 (254)
T ss_pred             CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence            3667889999999999999864 578999999976533  4567899999999999999999999999999999999999


Q ss_pred             cCCCChhHHhhcC
Q 017984          347 VPNQSLLDNLFDK  359 (363)
Q Consensus       347 ~~~gsL~~~l~~~  359 (363)
                      +++++|.+++...
T Consensus        81 ~~~~~L~~~~~~~   93 (254)
T cd06627          81 AENGSLRQIIKKF   93 (254)
T ss_pred             CCCCcHHHHHHhc
Confidence            9999999988654

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.05  E-value=3.9e-10  Score=105.29  Aligned_cols=92  Identities=25%  Similarity=0.347  Sum_probs=75.7

Q ss_pred             hccCCCcCceecccCceEEEEEEcC------CCCEEEEEEeccC-ChhhHHHHHHHHHHHhcC-CCCCccceeeEEEe-C
Q 017984          267 ATNYFHESNKLGQGGSGSVYKGTLP------GGEAVAVKRLFYN-TTQWVDHFFNEVNLISGI-NHKNLVKLLGCSIT-G  337 (363)
Q Consensus       267 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~-~  337 (363)
                      +.++|+..+.||+|+||.||++...      +++.||+|+++.. .....+.+.+|+.++.++ +|+||+++++++.. +
T Consensus         5 ~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~   84 (337)
T cd05054           5 PRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPG   84 (337)
T ss_pred             CHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCC
Confidence            4457888999999999999999742      2578999998753 233345688999999999 89999999998765 4


Q ss_pred             CeeEEEEEccCCCChhHHhhc
Q 017984          338 PESLLVYEFVPNQSLLDNLFD  358 (363)
Q Consensus       338 ~~~~lv~Ey~~~gsL~~~l~~  358 (363)
                      ..++++|||+++|+|.++|..
T Consensus        85 ~~~~~v~ey~~~~~L~~~i~~  105 (337)
T cd05054          85 GPLMVIVEYCKFGNLSNYLRS  105 (337)
T ss_pred             CCEEEEEecCCCCCHHHHHHh
Confidence            578899999999999999864

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.04  E-value=1.5e-09  Score=98.74  Aligned_cols=90  Identities=29%  Similarity=0.431  Sum_probs=78.6

Q ss_pred             CCcCceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEccCC
Q 017984          271 FHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPN  349 (363)
Q Consensus       271 ~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~~~  349 (363)
                      |...+.||+|++|.||++.. .+++.+++|++........+.+.+|+.++..++||||+++++++...+..++|+||+++
T Consensus        21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~  100 (285)
T cd06648          21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEG  100 (285)
T ss_pred             hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCC
Confidence            44567999999999999985 46889999998765555566789999999999999999999999999999999999999


Q ss_pred             CChhHHhhcCC
Q 017984          350 QSLLDNLFDKM  360 (363)
Q Consensus       350 gsL~~~l~~~~  360 (363)
                      ++|.+++...+
T Consensus       101 ~~L~~~~~~~~  111 (285)
T cd06648         101 GALTDIVTHTR  111 (285)
T ss_pred             CCHHHHHHhCC
Confidence            99999987643

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.04  E-value=5.1e-10  Score=104.29  Aligned_cols=91  Identities=24%  Similarity=0.330  Sum_probs=76.6

Q ss_pred             cCCCcCceecccCceEEEEEEcC--------CCCEEEEEEeccC-ChhhHHHHHHHHHHHhcC-CCCCccceeeEEEeCC
Q 017984          269 NYFHESNKLGQGGSGSVYKGTLP--------GGEAVAVKRLFYN-TTQWVDHFFNEVNLISGI-NHKNLVKLLGCSITGP  338 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~~--------~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~  338 (363)
                      .+|...+.||+|+||.||++...        .+..||+|.+... .....+++.+|+.++.++ +||||+++++++...+
T Consensus        12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~   91 (334)
T cd05100          12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG   91 (334)
T ss_pred             hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC
Confidence            35778899999999999999741        1236899988753 334467899999999999 7999999999999999


Q ss_pred             eeEEEEEccCCCChhHHhhcC
Q 017984          339 ESLLVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       339 ~~~lv~Ey~~~gsL~~~l~~~  359 (363)
                      ..+++|||+++|+|.++|..+
T Consensus        92 ~~~lv~e~~~~g~L~~~l~~~  112 (334)
T cd05100          92 PLYVLVEYASKGNLREYLRAR  112 (334)
T ss_pred             ceEEEEecCCCCcHHHHHHhc
Confidence            999999999999999999753

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.04  E-value=1.2e-09  Score=99.16  Aligned_cols=88  Identities=26%  Similarity=0.429  Sum_probs=75.0

Q ss_pred             CCCcCceecccCceEEEEEEcC-CCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEc
Q 017984          270 YFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      +|...+.||+|++|.||++... +++.||+|.++..  .......+.+|+.++..++||||+++++++..++..++||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF   80 (285)
T ss_pred             CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence            3667789999999999999964 6889999998643  222345688999999999999999999999999999999999


Q ss_pred             cCCCChhHHhhc
Q 017984          347 VPNQSLLDNLFD  358 (363)
Q Consensus       347 ~~~gsL~~~l~~  358 (363)
                      ++ ++|.+++..
T Consensus        81 ~~-~~l~~~~~~   91 (285)
T cd07861          81 LS-MDLKKYLDS   91 (285)
T ss_pred             CC-CCHHHHHhc
Confidence            97 589888754

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.04  E-value=7.8e-10  Score=103.15  Aligned_cols=89  Identities=18%  Similarity=0.123  Sum_probs=70.0

Q ss_pred             HHHHhccCCCcCceecccCceEEEEEEcC--CCCEEEEEEeccC-----ChhhHHHHHHHHHHHhcCCCCCccceeeEEE
Q 017984          263 TLEKATNYFHESNKLGQGGSGSVYKGTLP--GGEAVAVKRLFYN-----TTQWVDHFFNEVNLISGINHKNLVKLLGCSI  335 (363)
Q Consensus       263 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~--~g~~vavK~l~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~  335 (363)
                      +.....++|...+.||+|+||.||++...  +++.+|||++...     .....+.|.+|+++|.+++|+|++..+..  
T Consensus        12 ~~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~--   89 (365)
T PRK09188         12 QIPALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA--   89 (365)
T ss_pred             ccccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE--
Confidence            34455678999999999999999999863  5778899987533     22335669999999999999999953322  


Q ss_pred             eCCeeEEEEEccCCCChhH
Q 017984          336 TGPESLLVYEFVPNQSLLD  354 (363)
Q Consensus       336 ~~~~~~lv~Ey~~~gsL~~  354 (363)
                       .+..+|||||++|++|..
T Consensus        90 -~~~~~LVmE~~~G~~L~~  107 (365)
T PRK09188         90 -TGKDGLVRGWTEGVPLHL  107 (365)
T ss_pred             -cCCcEEEEEccCCCCHHH
Confidence             246799999999999963

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.04  E-value=5.1e-10  Score=99.90  Aligned_cols=87  Identities=30%  Similarity=0.452  Sum_probs=74.9

Q ss_pred             CCcCceecccCceEEEEEEcC-CCCEEEEEEeccCChhhH--HHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEcc
Q 017984          271 FHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYNTTQWV--DHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFV  347 (363)
Q Consensus       271 ~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~--~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~  347 (363)
                      |...+.||+|+||.||++... +++.+|+|.+........  ....+|+.++.+++||||+++++++......++||||+
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~   80 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC   80 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred             CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence            456789999999999999974 467899999987644332  23567999999999999999999999999999999999


Q ss_pred             CCCChhHHhh
Q 017984          348 PNQSLLDNLF  357 (363)
Q Consensus       348 ~~gsL~~~l~  357 (363)
                      ++++|.++|.
T Consensus        81 ~~~~L~~~l~   90 (260)
T PF00069_consen   81 PGGSLQDYLQ   90 (260)
T ss_dssp             TTEBHHHHHH
T ss_pred             cccccccccc
Confidence            9999999987

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.04  E-value=6e-11  Score=112.31  Aligned_cols=88  Identities=26%  Similarity=0.447  Sum_probs=74.3

Q ss_pred             CCcCceecccCceEEEEEEc-CCCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEc
Q 017984          271 FHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       271 ~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      |.....||.|+||.||-+.. .+.+.||||++.-.   +....+.++.|+..|++++|||++.+.|||..+...||||||
T Consensus        28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEY  107 (948)
T KOG0577|consen   28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEY  107 (948)
T ss_pred             HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHH
Confidence            45566799999999999985 56889999999754   334456799999999999999999999999999999999999


Q ss_pred             cCCCChhHHhhcC
Q 017984          347 VPNQSLLDNLFDK  359 (363)
Q Consensus       347 ~~~gsL~~~l~~~  359 (363)
                      |- ||-.++|.-+
T Consensus       108 Cl-GSAsDlleVh  119 (948)
T KOG0577|consen  108 CL-GSASDLLEVH  119 (948)
T ss_pred             Hh-ccHHHHHHHH
Confidence            95 4777776543

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.04  E-value=1.1e-09  Score=97.62  Aligned_cols=85  Identities=36%  Similarity=0.571  Sum_probs=74.7

Q ss_pred             ceecccCceEEEEEEcCC----CCEEEEEEeccCChh-hHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEccCC
Q 017984          275 NKLGQGGSGSVYKGTLPG----GEAVAVKRLFYNTTQ-WVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPN  349 (363)
Q Consensus       275 ~~lg~G~~g~Vy~~~~~~----g~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~~~  349 (363)
                      +.||+|+||.||++....    +..+++|.+...... ..+.+.+|++++..++|+||+++++++......++||||+++
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG   80 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence            468999999999999643    778999999765332 367899999999999999999999999999999999999999


Q ss_pred             CChhHHhhcC
Q 017984          350 QSLLDNLFDK  359 (363)
Q Consensus       350 gsL~~~l~~~  359 (363)
                      ++|.+++...
T Consensus        81 ~~L~~~l~~~   90 (262)
T cd00192          81 GDLLDYLRKS   90 (262)
T ss_pred             CcHHHHHhhc
Confidence            9999999864

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.04  E-value=1.1e-09  Score=99.15  Aligned_cols=84  Identities=21%  Similarity=0.269  Sum_probs=71.8

Q ss_pred             ecccCceEEEEEEc-CCCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEccCCCCh
Q 017984          277 LGQGGSGSVYKGTL-PGGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQSL  352 (363)
Q Consensus       277 lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~~~gsL  352 (363)
                      ||+|+||.||++.. .+|+.+|+|.+...   .......+.+|+++++.++||||+++++.+...+..++||||+++++|
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL   80 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence            68999999999985 46889999998643   222345678999999999999999999999999999999999999999


Q ss_pred             hHHhhcCC
Q 017984          353 LDNLFDKM  360 (363)
Q Consensus       353 ~~~l~~~~  360 (363)
                      .++|....
T Consensus        81 ~~~l~~~~   88 (277)
T cd05577          81 KYHIYNVG   88 (277)
T ss_pred             HHHHHHcC
Confidence            99987543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.04  E-value=6.6e-10  Score=109.03  Aligned_cols=97  Identities=20%  Similarity=0.181  Sum_probs=79.6

Q ss_pred             HHHHHhccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCC
Q 017984          262 ETLEKATNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGP  338 (363)
Q Consensus       262 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~  338 (363)
                      .+.....++|...+.||+|+||.||++.. .+|+.||||++...  .......+.+|+.++..++|+||++++..+....
T Consensus        25 ~~~~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~  104 (496)
T PTZ00283         25 ATAKEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKD  104 (496)
T ss_pred             ccccccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceeccc
Confidence            33444567899999999999999999985 56899999999753  3445567899999999999999999987765432


Q ss_pred             --------eeEEEEEccCCCChhHHhhc
Q 017984          339 --------ESLLVYEFVPNQSLLDNLFD  358 (363)
Q Consensus       339 --------~~~lv~Ey~~~gsL~~~l~~  358 (363)
                              .+++||||+++|+|.++|..
T Consensus       105 ~~~~~~~~~i~lV~Ey~~~gsL~~~l~~  132 (496)
T PTZ00283        105 PRNPENVLMIALVLDYANAGDLRQEIKS  132 (496)
T ss_pred             ccCcccceEEEEEEeCCCCCcHHHHHHH
Confidence                    36899999999999999865

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.03  E-value=9.6e-10  Score=98.92  Aligned_cols=92  Identities=26%  Similarity=0.335  Sum_probs=78.6

Q ss_pred             HhccCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccCChhhHHHHHHHHHHHhcC-CCCCccceeeEEEeCC-----
Q 017984          266 KATNYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYNTTQWVDHFFNEVNLISGI-NHKNLVKLLGCSITGP-----  338 (363)
Q Consensus       266 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~-----  338 (363)
                      .++++|...+.||+|++|.||++... +++.+++|++..... ..+.|.+|+.++.++ +|+||+++++++....     
T Consensus         3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~   81 (275)
T cd06608           3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND   81 (275)
T ss_pred             CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence            46788999999999999999999974 578999999876543 346799999999999 6999999999987644     


Q ss_pred             -eeEEEEEccCCCChhHHhhc
Q 017984          339 -ESLLVYEFVPNQSLLDNLFD  358 (363)
Q Consensus       339 -~~~lv~Ey~~~gsL~~~l~~  358 (363)
                       ..++||||+++++|.+++..
T Consensus        82 ~~~~lv~e~~~~~~L~~~~~~  102 (275)
T cd06608          82 DQLWLVMELCGGGSVTDLVKG  102 (275)
T ss_pred             eEEEEEEEcCCCCcHHHHHHH
Confidence             48999999999999998864

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.03  E-value=6.6e-10  Score=100.35  Aligned_cols=91  Identities=21%  Similarity=0.243  Sum_probs=79.1

Q ss_pred             cCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCC-CCCccceeeEEEeCCeeEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYN---TTQWVDHFFNEVNLISGIN-HKNLVKLLGCSITGPESLLV  343 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv  343 (363)
                      ++|...+.||+|++|.||++... +++.+++|++...   .....+.+.+|+.++.+++ ||||+++++.+...+..++|
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv   80 (280)
T cd05581           1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV   80 (280)
T ss_pred             CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence            35778889999999999999964 6899999998642   2333467899999999998 99999999999999999999


Q ss_pred             EEccCCCChhHHhhcC
Q 017984          344 YEFVPNQSLLDNLFDK  359 (363)
Q Consensus       344 ~Ey~~~gsL~~~l~~~  359 (363)
                      |||+++++|.+++.+.
T Consensus        81 ~e~~~~~~L~~~l~~~   96 (280)
T cd05581          81 LEYAPNGELLQYIRKY   96 (280)
T ss_pred             EcCCCCCcHHHHHHHc
Confidence            9999999999998765

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.03  E-value=4.9e-11  Score=120.33  Aligned_cols=100  Identities=20%  Similarity=0.117  Sum_probs=85.9

Q ss_pred             hHHHHHhccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEe
Q 017984          261 YETLEKATNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSIT  336 (363)
Q Consensus       261 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~  336 (363)
                      ..+++-..++|...++||+|+||.|..+++ .+++.+|+|++.++   ......-|..|-.+|..-+.++|+.|+-.|.+
T Consensus        67 v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD  146 (1317)
T KOG0612|consen   67 VKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQD  146 (1317)
T ss_pred             HHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcC
Confidence            345556677889999999999999999997 45889999999763   23334568999999999999999999999999


Q ss_pred             CCeeEEEEEccCCCChhHHhhcCC
Q 017984          337 GPESLLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       337 ~~~~~lv~Ey~~~gsL~~~l~~~~  360 (363)
                      +.++|||||||+||||..+|.+..
T Consensus       147 ~~~LYlVMdY~pGGDlltLlSk~~  170 (1317)
T KOG0612|consen  147 ERYLYLVMDYMPGGDLLTLLSKFD  170 (1317)
T ss_pred             ccceEEEEecccCchHHHHHhhcC
Confidence            999999999999999999997654

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.02  E-value=2e-09  Score=95.19  Aligned_cols=89  Identities=31%  Similarity=0.495  Sum_probs=79.8

Q ss_pred             CCcCceecccCceEEEEEEcC-CCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEccCC
Q 017984          271 FHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPN  349 (363)
Q Consensus       271 ~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~~~  349 (363)
                      |...+.||+|++|.||++... +++.+++|++..........+.+|++++++++|+||+++++++......++++||+++
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~   81 (253)
T cd05122           2 FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSG   81 (253)
T ss_pred             ceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCC
Confidence            667789999999999999974 6889999999766545567899999999999999999999999999999999999999


Q ss_pred             CChhHHhhcC
Q 017984          350 QSLLDNLFDK  359 (363)
Q Consensus       350 gsL~~~l~~~  359 (363)
                      ++|.+++...
T Consensus        82 ~~L~~~~~~~   91 (253)
T cd05122          82 GSLKDLLKST   91 (253)
T ss_pred             CcHHHHHhhc
Confidence            9999998765

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.02  E-value=1.2e-09  Score=99.55  Aligned_cols=91  Identities=27%  Similarity=0.396  Sum_probs=76.4

Q ss_pred             hccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEE
Q 017984          267 ATNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNT-TQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVY  344 (363)
Q Consensus       267 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  344 (363)
                      ++++|...+.||+|+||.||++.. .+++.+++|++.... ......+.+|+.+++.++|+||+++.+++..+...++||
T Consensus         3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~   82 (291)
T cd07870           3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF   82 (291)
T ss_pred             ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence            356788899999999999999986 468899999997542 222346789999999999999999999999999999999


Q ss_pred             EccCCCChhHHhhc
Q 017984          345 EFVPNQSLLDNLFD  358 (363)
Q Consensus       345 Ey~~~gsL~~~l~~  358 (363)
                      ||++ ++|.+++..
T Consensus        83 e~~~-~~l~~~~~~   95 (291)
T cd07870          83 EYMH-TDLAQYMIQ   95 (291)
T ss_pred             eccc-CCHHHHHHh
Confidence            9996 678777654

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.02  E-value=1.4e-09  Score=98.01  Aligned_cols=86  Identities=27%  Similarity=0.475  Sum_probs=70.5

Q ss_pred             CcCceecccCceEEEEEEcCC-CC--EEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeC------Cee
Q 017984          272 HESNKLGQGGSGSVYKGTLPG-GE--AVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITG------PES  340 (363)
Q Consensus       272 ~~~~~lg~G~~g~Vy~~~~~~-g~--~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~~  340 (363)
                      ...+.||+|+||.||+|.+.+ +.  .+|+|.++..  .....+.|.+|+.++..++||||+++++.+...      ...
T Consensus         2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   81 (272)
T cd05075           2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP   81 (272)
T ss_pred             ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence            456789999999999999743 33  6899988753  345567899999999999999999999987532      257


Q ss_pred             EEEEEccCCCChhHHhh
Q 017984          341 LLVYEFVPNQSLLDNLF  357 (363)
Q Consensus       341 ~lv~Ey~~~gsL~~~l~  357 (363)
                      +++|||+++|+|.+++.
T Consensus        82 ~~v~e~~~~~~l~~~~~   98 (272)
T cd05075          82 VVILPFMKHGDLHSFLL   98 (272)
T ss_pred             EEEEEeCCCCcHHHHHH
Confidence            89999999999999874

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.02  E-value=4.9e-10  Score=100.79  Aligned_cols=84  Identities=38%  Similarity=0.538  Sum_probs=71.8

Q ss_pred             ceecccCceEEEEEEcCC-------CCEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEc
Q 017984          275 NKLGQGGSGSVYKGTLPG-------GEAVAVKRLFYNT-TQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       275 ~~lg~G~~g~Vy~~~~~~-------g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      +.||+|+||.||++...+       ++.+++|.+.... .....+|.+|+.+++.++||||+++++++...+..++||||
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (269)
T cd05044           1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL   80 (269)
T ss_pred             CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence            368999999999998632       2578999886542 23456799999999999999999999999999999999999


Q ss_pred             cCCCChhHHhhc
Q 017984          347 VPNQSLLDNLFD  358 (363)
Q Consensus       347 ~~~gsL~~~l~~  358 (363)
                      +++|+|.++|.+
T Consensus        81 ~~~~~L~~~l~~   92 (269)
T cd05044          81 MEGGDLLSYLRD   92 (269)
T ss_pred             cCCCcHHHHHHH
Confidence            999999999975

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.01  E-value=1e-09  Score=99.63  Aligned_cols=88  Identities=34%  Similarity=0.488  Sum_probs=75.1

Q ss_pred             CCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCC--hhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEc
Q 017984          270 YFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNT--TQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      +|...+.||+|++|.||++.. .+++.||||.+....  ......+.+|++++.+++||||+++++++...+..++||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF   80 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence            467788999999999999986 468899999987432  22345789999999999999999999999999999999999


Q ss_pred             cCCCChhHHhhc
Q 017984          347 VPNQSLLDNLFD  358 (363)
Q Consensus       347 ~~~gsL~~~l~~  358 (363)
                      ++ ++|.+++..
T Consensus        81 ~~-~~l~~~~~~   91 (284)
T cd07860          81 LH-QDLKKFMDA   91 (284)
T ss_pred             cc-cCHHHHHHh
Confidence            96 589888764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.01  E-value=1.2e-09  Score=99.03  Aligned_cols=99  Identities=24%  Similarity=0.366  Sum_probs=82.0

Q ss_pred             chHHHHHhccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcC-CCCCccceeeEEEe-
Q 017984          260 SYETLEKATNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGI-NHKNLVKLLGCSIT-  336 (363)
Q Consensus       260 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~-  336 (363)
                      ++.++..+.+.|...+.||+|+||.||++.. .+++.+|+|.+.... ....++..|+.++.++ +|+||+++++++.. 
T Consensus         7 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~   85 (282)
T cd06636           7 DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIKK   85 (282)
T ss_pred             hhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcc
Confidence            4556666778889999999999999999996 458899999986543 3345688999999998 69999999998853 


Q ss_pred             -----CCeeEEEEEccCCCChhHHhhcC
Q 017984          337 -----GPESLLVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       337 -----~~~~~lv~Ey~~~gsL~~~l~~~  359 (363)
                           ....+++|||+++|+|.+++...
T Consensus        86 ~~~~~~~~~~iv~e~~~~~~L~~~~~~~  113 (282)
T cd06636          86 SPPGHDDQLWLVMEFCGAGSVTDLVKNT  113 (282)
T ss_pred             cccCCCCEEEEEEEeCCCCcHHHHHHHc
Confidence                 45789999999999999988653

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.01  E-value=8.6e-10  Score=100.06  Aligned_cols=87  Identities=28%  Similarity=0.392  Sum_probs=74.7

Q ss_pred             CCcCceecccCceEEEEEEcC------CCCEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEE
Q 017984          271 FHESNKLGQGGSGSVYKGTLP------GGEAVAVKRLFYNT-TQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLV  343 (363)
Q Consensus       271 ~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  343 (363)
                      |...+.||+|+||.||++...      +++.||+|++.... ....+.|.+|+.++..++||||+++++++...+..+++
T Consensus         7 ~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~   86 (283)
T cd05091           7 VRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSMI   86 (283)
T ss_pred             HHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEEE
Confidence            556778999999999999853      24689999997543 33356799999999999999999999999999999999


Q ss_pred             EEccCCCChhHHhh
Q 017984          344 YEFVPNQSLLDNLF  357 (363)
Q Consensus       344 ~Ey~~~gsL~~~l~  357 (363)
                      +||+++++|.+++.
T Consensus        87 ~e~~~~~~l~~~l~  100 (283)
T cd05091          87 FSYCSHSDLHEFLV  100 (283)
T ss_pred             EEcCCCCcHHHHHH
Confidence            99999999999985

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.01  E-value=5.8e-10  Score=104.45  Aligned_cols=83  Identities=28%  Similarity=0.363  Sum_probs=70.8

Q ss_pred             cCceecccCceEEEEEEc-CCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEccCC
Q 017984          273 ESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPN  349 (363)
Q Consensus       273 ~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~~~  349 (363)
                      ..++||.|.||.||-|.. ++|+.||||+|.+.  .......+++|+.+|++++||.||.|.-.+++.+.+++|||-+.|
T Consensus       568 ~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~G  647 (888)
T KOG4236|consen  568 ADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHG  647 (888)
T ss_pred             hHhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcc
Confidence            356899999999999996 57999999999753  333346799999999999999999999999999999999999955


Q ss_pred             CChhHHh
Q 017984          350 QSLLDNL  356 (363)
Q Consensus       350 gsL~~~l  356 (363)
                       |+.+.|
T Consensus       648 -DMLEMI  653 (888)
T KOG4236|consen  648 -DMLEMI  653 (888)
T ss_pred             -hHHHHH
Confidence             555554

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.01  E-value=1.7e-09  Score=97.34  Aligned_cols=88  Identities=19%  Similarity=0.337  Sum_probs=73.5

Q ss_pred             CCCcCceecccCceEEEEEEcCC--CCEEEEEEeccC----------ChhhHHHHHHHHHHHhc-CCCCCccceeeEEEe
Q 017984          270 YFHESNKLGQGGSGSVYKGTLPG--GEAVAVKRLFYN----------TTQWVDHFFNEVNLISG-INHKNLVKLLGCSIT  336 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~~~~--g~~vavK~l~~~----------~~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~  336 (363)
                      +|...+.||+|+||.||++....  ++.+|+|.+...          ......++.+|+.++.+ ++||||+++++++..
T Consensus         1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~   80 (269)
T cd08528           1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE   80 (269)
T ss_pred             CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence            36778899999999999999754  678999988532          22334568889998875 799999999999999


Q ss_pred             CCeeEEEEEccCCCChhHHhh
Q 017984          337 GPESLLVYEFVPNQSLLDNLF  357 (363)
Q Consensus       337 ~~~~~lv~Ey~~~gsL~~~l~  357 (363)
                      .+..++||||+++++|.+++.
T Consensus        81 ~~~~~lv~e~~~~~~l~~~l~  101 (269)
T cd08528          81 NDRLYIVMDLIEGAPLGEHFN  101 (269)
T ss_pred             CCeEEEEEecCCCCcHHHHHH
Confidence            999999999999999998874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.01  E-value=1.8e-09  Score=96.69  Aligned_cols=85  Identities=27%  Similarity=0.408  Sum_probs=70.3

Q ss_pred             ceecccCceEEEEEEcC----CCCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEe-CCeeEEEEEccC
Q 017984          275 NKLGQGGSGSVYKGTLP----GGEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSIT-GPESLLVYEFVP  348 (363)
Q Consensus       275 ~~lg~G~~g~Vy~~~~~----~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~~lv~Ey~~  348 (363)
                      +.||+|+||.||++...    +...+|+|.+... .....+.|.+|+.+++.++||||+++++++.. ++..++||||++
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~   80 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK   80 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence            46899999999999852    2457999998643 34456789999999999999999999997764 556899999999


Q ss_pred             CCChhHHhhcC
Q 017984          349 NQSLLDNLFDK  359 (363)
Q Consensus       349 ~gsL~~~l~~~  359 (363)
                      +|+|.+++.+.
T Consensus        81 ~~~L~~~~~~~   91 (262)
T cd05058          81 HGDLRNFIRSE   91 (262)
T ss_pred             CCCHHHHHHhc
Confidence            99999998754

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.01  E-value=1.8e-09  Score=96.53  Aligned_cols=89  Identities=21%  Similarity=0.348  Sum_probs=75.0

Q ss_pred             CCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEe--CCeeEEEE
Q 017984          270 YFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSIT--GPESLLVY  344 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv~  344 (363)
                      +|...+.||.|+||.||++.. .+++.+++|.+...  .....+.+.+|+.++++++||||+++++.+..  +...+++|
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM   80 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence            366778999999999999985 46889999998643  34445679999999999999999999997754  45689999


Q ss_pred             EccCCCChhHHhhc
Q 017984          345 EFVPNQSLLDNLFD  358 (363)
Q Consensus       345 Ey~~~gsL~~~l~~  358 (363)
                      ||+++++|.+++..
T Consensus        81 e~~~~~~L~~~l~~   94 (265)
T cd08217          81 EYCEGGDLAQLIQK   94 (265)
T ss_pred             hhccCCCHHHHHHH
Confidence            99999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.01  E-value=1.7e-09  Score=96.53  Aligned_cols=89  Identities=28%  Similarity=0.436  Sum_probs=75.2

Q ss_pred             cCCCcCceecccCceEEEEEEcCCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEE-eCCeeEEEEEcc
Q 017984          269 NYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSI-TGPESLLVYEFV  347 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~~~~~lv~Ey~  347 (363)
                      ++|...+.||+|+||.||++... |..+++|.++...  ..+.|.+|+.++++++|+|++++++++. .++..++||||+
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~   82 (256)
T cd05082           6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM   82 (256)
T ss_pred             HhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECC
Confidence            45778889999999999999875 7789999986432  2457999999999999999999999765 456789999999


Q ss_pred             CCCChhHHhhcCC
Q 017984          348 PNQSLLDNLFDKM  360 (363)
Q Consensus       348 ~~gsL~~~l~~~~  360 (363)
                      ++++|.+++.++.
T Consensus        83 ~~~~L~~~~~~~~   95 (256)
T cd05082          83 AKGSLVDYLRSRG   95 (256)
T ss_pred             CCCcHHHHHHhcC
Confidence            9999999987643

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.01  E-value=1.6e-09  Score=103.24  Aligned_cols=85  Identities=19%  Similarity=0.151  Sum_probs=73.6

Q ss_pred             cCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEcc
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFV  347 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~  347 (363)
                      .+|...+.||+|+||.||++.. .+++.||+|...      ...+.+|+.++++++||||+++++++......++|+|++
T Consensus        92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~  165 (391)
T PHA03212         92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRY  165 (391)
T ss_pred             CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecC
Confidence            5688999999999999999986 568899999753      234789999999999999999999999999999999999


Q ss_pred             CCCChhHHhhcCC
Q 017984          348 PNQSLLDNLFDKM  360 (363)
Q Consensus       348 ~~gsL~~~l~~~~  360 (363)
                      . ++|.+++....
T Consensus       166 ~-~~L~~~l~~~~  177 (391)
T PHA03212        166 K-TDLYCYLAAKR  177 (391)
T ss_pred             C-CCHHHHHHhcC
Confidence            5 68988886543

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.00  E-value=2.2e-09  Score=95.42  Aligned_cols=90  Identities=19%  Similarity=0.314  Sum_probs=78.9

Q ss_pred             CCCcCceecccCceEEEEEEcC-CCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEc
Q 017984          270 YFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      +|...+.||+|++|.||++... +++.+++|++...  ......++.+|+++++.++|||++++++.+......++|+||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~   80 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY   80 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence            3667789999999999999974 5889999999754  235566799999999999999999999999999999999999


Q ss_pred             cCCCChhHHhhcC
Q 017984          347 VPNQSLLDNLFDK  359 (363)
Q Consensus       347 ~~~gsL~~~l~~~  359 (363)
                      +++++|.+++...
T Consensus        81 ~~~~~L~~~l~~~   93 (258)
T cd08215          81 ADGGDLSQKIKKQ   93 (258)
T ss_pred             cCCCcHHHHHHHh
Confidence            9999999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.00  E-value=1.2e-09  Score=99.19  Aligned_cols=89  Identities=24%  Similarity=0.273  Sum_probs=75.8

Q ss_pred             CCCcCceecccCceEEEEEEcC-CCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEc
Q 017984          270 YFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      +|+..+.||+|++|.||++... +++.|++|.++..  .....+.+.+|++++++++|+||+++++++..++..++||||
T Consensus         2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~   81 (288)
T cd07833           2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEY   81 (288)
T ss_pred             ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEec
Confidence            5778889999999999999974 5889999998643  233456799999999999999999999999999999999999


Q ss_pred             cCCCChhHHhhc
Q 017984          347 VPNQSLLDNLFD  358 (363)
Q Consensus       347 ~~~gsL~~~l~~  358 (363)
                      ++++.|..++..
T Consensus        82 ~~~~~l~~~~~~   93 (288)
T cd07833          82 VERTLLELLEAS   93 (288)
T ss_pred             CCCCHHHHHHhc
Confidence            998777665543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.00  E-value=1.3e-09  Score=97.50  Aligned_cols=83  Identities=23%  Similarity=0.299  Sum_probs=72.9

Q ss_pred             ecccCceEEEEEEcC-CCCEEEEEEeccCCh---hhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEccCCCCh
Q 017984          277 LGQGGSGSVYKGTLP-GGEAVAVKRLFYNTT---QWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQSL  352 (363)
Q Consensus       277 lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~~~gsL  352 (363)
                      ||+|+||.||++... +|+.+++|.+.....   ...+.+.+|+.++.+++||||+++++.+..+...++||||+++++|
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL   80 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence            688999999999975 489999999975432   4456799999999999999999999999999999999999999999


Q ss_pred             hHHhhcC
Q 017984          353 LDNLFDK  359 (363)
Q Consensus       353 ~~~l~~~  359 (363)
                      .+++.+.
T Consensus        81 ~~~l~~~   87 (265)
T cd05579          81 ASLLENV   87 (265)
T ss_pred             HHHHHHc
Confidence            9998753

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.00  E-value=1.8e-09  Score=99.30  Aligned_cols=89  Identities=26%  Similarity=0.446  Sum_probs=75.1

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLV  343 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  343 (363)
                      ...|...+.||+|+||.||++.. .+++.||+|.+...   .....+++.+|+++++.++||||+++++++...+..+||
T Consensus        14 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv   93 (307)
T cd06607          14 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLV   93 (307)
T ss_pred             chhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEE
Confidence            34577888999999999999986 45889999998643   233456789999999999999999999999999999999


Q ss_pred             EEccCCCChhHHhh
Q 017984          344 YEFVPNQSLLDNLF  357 (363)
Q Consensus       344 ~Ey~~~gsL~~~l~  357 (363)
                      |||++ |+|.+++.
T Consensus        94 ~e~~~-g~l~~~~~  106 (307)
T cd06607          94 MEYCL-GSASDILE  106 (307)
T ss_pred             HHhhC-CCHHHHHH
Confidence            99997 57777664

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=98.99  E-value=1.1e-11  Score=105.50  Aligned_cols=89  Identities=18%  Similarity=0.307  Sum_probs=76.7

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVY  344 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  344 (363)
                      ++.|++.+.||+|.|+.|+++.. ++|+.+|+|++...  +....+++.+|+++-+.|+|||||+|+....+....|||+
T Consensus        10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvF   89 (355)
T KOG0033|consen   10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF   89 (355)
T ss_pred             chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEE
Confidence            35567778999999999999885 67999999988643  3335678999999999999999999999999999999999


Q ss_pred             EccCCCChhHHh
Q 017984          345 EFVPNQSLLDNL  356 (363)
Q Consensus       345 Ey~~~gsL~~~l  356 (363)
                      |+|.|++|..-|
T Consensus        90 e~m~G~dl~~eI  101 (355)
T KOG0033|consen   90 DLVTGGELFEDI  101 (355)
T ss_pred             ecccchHHHHHH
Confidence            999999997655

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=98.99  E-value=2.3e-09  Score=95.69  Aligned_cols=90  Identities=19%  Similarity=0.206  Sum_probs=75.3

Q ss_pred             CCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEe-CCeeEEEEE
Q 017984          270 YFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSIT-GPESLLVYE  345 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~~lv~E  345 (363)
                      +|...+.||+|++|.||++.. .+++.+++|.+...  .....+.+.+|++++++++|+|++++++.+.. ...++++||
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e   80 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG   80 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence            367788999999999999996 45789999998643  33445678999999999999999999988764 446899999


Q ss_pred             ccCCCChhHHhhcC
Q 017984          346 FVPNQSLLDNLFDK  359 (363)
Q Consensus       346 y~~~gsL~~~l~~~  359 (363)
                      |+++++|.+++.+.
T Consensus        81 ~~~~~~l~~~l~~~   94 (257)
T cd08223          81 FCEGGDLYHKLKEQ   94 (257)
T ss_pred             ccCCCcHHHHHHHh
Confidence            99999999998753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=98.99  E-value=1.1e-09  Score=106.47  Aligned_cols=93  Identities=23%  Similarity=0.319  Sum_probs=69.7

Q ss_pred             hccCCCcCceecccCceEEEEEEc-----------------CCCCEEEEEEeccCChhhHHH--------------HHHH
Q 017984          267 ATNYFHESNKLGQGGSGSVYKGTL-----------------PGGEAVAVKRLFYNTTQWVDH--------------FFNE  315 (363)
Q Consensus       267 ~~~~~~~~~~lg~G~~g~Vy~~~~-----------------~~g~~vavK~l~~~~~~~~~~--------------~~~E  315 (363)
                      ..++|...++||+|+||.||+|.+                 .+++.||||++........++              +..|
T Consensus       143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE  222 (507)
T PLN03224        143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE  222 (507)
T ss_pred             cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence            467899999999999999999963                 235689999997543332333              3457


Q ss_pred             HHHHhcCCCCCc-----cceeeEEEe--------CCeeEEEEEccCCCChhHHhhcC
Q 017984          316 VNLISGINHKNL-----VKLLGCSIT--------GPESLLVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       316 ~~~l~~l~h~ni-----v~l~~~~~~--------~~~~~lv~Ey~~~gsL~~~l~~~  359 (363)
                      +.++.+++|.++     +++++++..        .+..+|||||+++|+|.++|+..
T Consensus       223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~  279 (507)
T PLN03224        223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGK  279 (507)
T ss_pred             HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhc
Confidence            777777776654     677777653        35689999999999999999753

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=98.98  E-value=1.5e-09  Score=100.95  Aligned_cols=97  Identities=23%  Similarity=0.332  Sum_probs=79.4

Q ss_pred             HHHhccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEe-CCe
Q 017984          264 LEKATNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSIT-GPE  339 (363)
Q Consensus       264 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~  339 (363)
                      +...+++|...+.||+|+||.||++.. .+++.||+|++...  .....+.+.+|++++..++||||+++.+++.. ...
T Consensus         5 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~   84 (328)
T cd07856           5 VFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLED   84 (328)
T ss_pred             eeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCc
Confidence            345678899999999999999999985 46899999988642  22334668899999999999999999998865 567


Q ss_pred             eEEEEEccCCCChhHHhhcCCC
Q 017984          340 SLLVYEFVPNQSLLDNLFDKML  361 (363)
Q Consensus       340 ~~lv~Ey~~~gsL~~~l~~~~~  361 (363)
                      .++|+||+ +++|.+++...+.
T Consensus        85 ~~lv~e~~-~~~L~~~~~~~~~  105 (328)
T cd07856          85 IYFVTELL-GTDLHRLLTSRPL  105 (328)
T ss_pred             EEEEeehh-ccCHHHHHhcCCC
Confidence            89999999 5689888875543

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=98.98  E-value=2.7e-09  Score=95.35  Aligned_cols=85  Identities=32%  Similarity=0.472  Sum_probs=70.6

Q ss_pred             ceecccCceEEEEEEcC--C--CCEEEEEEeccCCh-hhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEccCC
Q 017984          275 NKLGQGGSGSVYKGTLP--G--GEAVAVKRLFYNTT-QWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPN  349 (363)
Q Consensus       275 ~~lg~G~~g~Vy~~~~~--~--g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~~~  349 (363)
                      +.||+|+||.||+|.+.  +  +..+|+|.+..... ...+++.+|+.++..++||||+++++++. .+..++||||+++
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~   79 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL   79 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence            46899999999999752  2  36899999975433 34567999999999999999999999875 4568999999999


Q ss_pred             CChhHHhhcCC
Q 017984          350 QSLLDNLFDKM  360 (363)
Q Consensus       350 gsL~~~l~~~~  360 (363)
                      |+|.++|.++.
T Consensus        80 ~~L~~~l~~~~   90 (257)
T cd05060          80 GPLLKYLKKRR   90 (257)
T ss_pred             CcHHHHHHhCC
Confidence            99999997654

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=98.98  E-value=1.9e-09  Score=97.75  Aligned_cols=89  Identities=19%  Similarity=0.247  Sum_probs=71.9

Q ss_pred             cCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccCC-hhhHHHHHHHHHH-HhcCCCCCccceeeEEEeCCeeEEEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYNT-TQWVDHFFNEVNL-ISGINHKNLVKLLGCSITGPESLLVYE  345 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~-~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~lv~E  345 (363)
                      ++|...+.||+|+||.||++... +|+.||+|+++... .....++..|+.+ ++.++||||+++++++..++..+++||
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e   80 (283)
T cd06617           1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME   80 (283)
T ss_pred             CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence            36778889999999999999964 68999999997542 2233456667665 566789999999999999999999999


Q ss_pred             ccCCCChhHHhhc
Q 017984          346 FVPNQSLLDNLFD  358 (363)
Q Consensus       346 y~~~gsL~~~l~~  358 (363)
                      |++ |+|.+++..
T Consensus        81 ~~~-~~l~~~l~~   92 (283)
T cd06617          81 VMD-TSLDKFYKK   92 (283)
T ss_pred             hhc-ccHHHHHHH
Confidence            997 588887754

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=98.98  E-value=2e-09  Score=97.54  Aligned_cols=90  Identities=29%  Similarity=0.428  Sum_probs=72.5

Q ss_pred             cCCCcCceecccCceEEEEEEc-CCCC----EEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL-PGGE----AVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLL  342 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~----~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  342 (363)
                      ++|...+.||+|+||.||++.+ .+++    .+++|.+... ......++..|+.++.+++||||+++++++. ....++
T Consensus         7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~~   85 (279)
T cd05111           7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASLQL   85 (279)
T ss_pred             hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCccEE
Confidence            3567788999999999999986 3444    4778887543 2334567889999999999999999999875 456789


Q ss_pred             EEEccCCCChhHHhhcC
Q 017984          343 VYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       343 v~Ey~~~gsL~~~l~~~  359 (363)
                      ++||+++|+|.+++...
T Consensus        86 i~e~~~~gsL~~~l~~~  102 (279)
T cd05111          86 VTQLSPLGSLLDHVRQH  102 (279)
T ss_pred             EEEeCCCCcHHHHHHhc
Confidence            99999999999999754

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=98.98  E-value=9.6e-10  Score=98.66  Aligned_cols=90  Identities=27%  Similarity=0.391  Sum_probs=75.0

Q ss_pred             CCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCCh--hhHHHHHHHHHHHhcCCCCC-ccceeeEEEeCC------e
Q 017984          270 YFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTT--QWVDHFFNEVNLISGINHKN-LVKLLGCSITGP------E  339 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~------~  339 (363)
                      .|...++||+|.||.||+|.. .+|+.||+|+++....  .-...-.+|+.++.+++|+| ||.|++++.+.+      .
T Consensus        12 ~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~   91 (323)
T KOG0594|consen   12 DYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGK   91 (323)
T ss_pred             HHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccce
Confidence            355566799999999999995 5689999999986533  22344689999999999999 999999998877      8


Q ss_pred             eEEEEEccCCCChhHHhhcCC
Q 017984          340 SLLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       340 ~~lv~Ey~~~gsL~~~l~~~~  360 (363)
                      ++||+||+.. +|..++...+
T Consensus        92 l~lvfe~~d~-DL~~ymd~~~  111 (323)
T KOG0594|consen   92 LYLVFEFLDR-DLKKYMDSLP  111 (323)
T ss_pred             EEEEEEeecc-cHHHHHHhcc
Confidence            8999999966 9999997654

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=98.97  E-value=1.8e-09  Score=96.28  Aligned_cols=87  Identities=28%  Similarity=0.491  Sum_probs=73.7

Q ss_pred             cCCCcCceecccCceEEEEEEcCCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEccC
Q 017984          269 NYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVP  348 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~~  348 (363)
                      ++|...+.||+|+||.||++.. +++.+|+|.++...  ..+.|.+|+.++.+++||||+++++++... ..++||||++
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~   81 (254)
T cd05083           6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMS   81 (254)
T ss_pred             HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCC
Confidence            3467888999999999999875 57789999986532  245789999999999999999999988654 5799999999


Q ss_pred             CCChhHHhhcC
Q 017984          349 NQSLLDNLFDK  359 (363)
Q Consensus       349 ~gsL~~~l~~~  359 (363)
                      +|+|.+++...
T Consensus        82 ~~~L~~~l~~~   92 (254)
T cd05083          82 KGNLVNFLRTR   92 (254)
T ss_pred             CCCHHHHHHhc
Confidence            99999998754

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=98.97  E-value=2.6e-09  Score=97.50  Aligned_cols=89  Identities=22%  Similarity=0.402  Sum_probs=75.3

Q ss_pred             cCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccCC--hhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYNT--TQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYE  345 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  345 (363)
                      ++|...+.||+|++|.||++... +++.||+|.+....  ......+.+|+.++++++||||+++++++......++|||
T Consensus         2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   81 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE   81 (294)
T ss_pred             CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence            46788899999999999999964 68899999986432  2334568899999999999999999999999999999999


Q ss_pred             ccCCCChhHHhhc
Q 017984          346 FVPNQSLLDNLFD  358 (363)
Q Consensus       346 y~~~gsL~~~l~~  358 (363)
                      |++ ++|.+++..
T Consensus        82 ~~~-~~l~~~~~~   93 (294)
T PLN00009         82 YLD-LDLKKHMDS   93 (294)
T ss_pred             ccc-ccHHHHHHh
Confidence            996 478877754

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=98.97  E-value=3.9e-09  Score=97.62  Aligned_cols=87  Identities=28%  Similarity=0.452  Sum_probs=73.6

Q ss_pred             CCcCceecccCceEEEEEEc-CCCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEc
Q 017984          271 FHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       271 ~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      |...+.||+|+||.||++.. .++..+|+|.+...   .......+.+|+.++++++|||++++++++..+...+|||||
T Consensus        27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  106 (317)
T cd06635          27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY  106 (317)
T ss_pred             hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence            56778899999999999996 46889999998643   223345789999999999999999999999999999999999


Q ss_pred             cCCCChhHHhhc
Q 017984          347 VPNQSLLDNLFD  358 (363)
Q Consensus       347 ~~~gsL~~~l~~  358 (363)
                      +++ +|.+++..
T Consensus       107 ~~g-~l~~~~~~  117 (317)
T cd06635         107 CLG-SASDLLEV  117 (317)
T ss_pred             CCC-CHHHHHHH
Confidence            975 78777653

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=98.96  E-value=3e-09  Score=98.81  Aligned_cols=85  Identities=25%  Similarity=0.240  Sum_probs=72.7

Q ss_pred             ceeccc--CceEEEEEEc-CCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEccCC
Q 017984          275 NKLGQG--GSGSVYKGTL-PGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPN  349 (363)
Q Consensus       275 ~~lg~G--~~g~Vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~~~  349 (363)
                      ..||+|  +|+.||++.. .+|+.||+|++...  .....+.+.+|+.++..++||||+++++++..++..++|+||+++
T Consensus         4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~   83 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY   83 (328)
T ss_pred             HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence            346666  8999999986 46899999998753  333456789999999999999999999999999999999999999


Q ss_pred             CChhHHhhcC
Q 017984          350 QSLLDNLFDK  359 (363)
Q Consensus       350 gsL~~~l~~~  359 (363)
                      |+|.+++...
T Consensus        84 ~~l~~~l~~~   93 (328)
T cd08226          84 GSANSLLKTY   93 (328)
T ss_pred             CCHHHHHHhh
Confidence            9999988753

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=98.96  E-value=1.9e-09  Score=95.93  Aligned_cols=89  Identities=25%  Similarity=0.392  Sum_probs=77.4

Q ss_pred             CCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEc
Q 017984          270 YFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      +|+..+.||+|++|.||++.. .+++.+++|.+...  ......++.+|++++++++|+||+++++++......++||||
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   80 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY   80 (256)
T ss_pred             CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence            367788999999999999985 46889999998753  234456788999999999999999999999999999999999


Q ss_pred             cCCCChhHHhhc
Q 017984          347 VPNQSLLDNLFD  358 (363)
Q Consensus       347 ~~~gsL~~~l~~  358 (363)
                      +++++|.+++.+
T Consensus        81 ~~~~~L~~~~~~   92 (256)
T cd08530          81 APFGDLSKAISK   92 (256)
T ss_pred             cCCCCHHHHHHH
Confidence            999999998865

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=98.96  E-value=3.4e-09  Score=95.98  Aligned_cols=90  Identities=31%  Similarity=0.528  Sum_probs=74.9

Q ss_pred             cCCCcCceecccCceEEEEEEc-CCCC----EEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL-PGGE----AVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLL  342 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~----~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  342 (363)
                      ++|...++||+|+||.||++.+ .+++    .||+|.++.. ......++.+|+.++..++||||+++++++.. ...++
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~l   85 (279)
T cd05109           7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQL   85 (279)
T ss_pred             hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcEE
Confidence            4577888999999999999985 3444    4899998754 34445679999999999999999999998875 45789


Q ss_pred             EEEccCCCChhHHhhcC
Q 017984          343 VYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       343 v~Ey~~~gsL~~~l~~~  359 (363)
                      ++||+++|+|.+++.++
T Consensus        86 ~~~~~~~g~l~~~l~~~  102 (279)
T cd05109          86 VTQLMPYGCLLDYVREN  102 (279)
T ss_pred             EEEcCCCCCHHHHHhhc
Confidence            99999999999999764

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=98.95  E-value=3.4e-09  Score=98.59  Aligned_cols=84  Identities=23%  Similarity=0.229  Sum_probs=68.3

Q ss_pred             ecccCceEEEEEEc-CCCCEEEEEEeccC---ChhhHHHHHHHHHHHhcC---CCCCccceeeEEEeCCeeEEEEEccCC
Q 017984          277 LGQGGSGSVYKGTL-PGGEAVAVKRLFYN---TTQWVDHFFNEVNLISGI---NHKNLVKLLGCSITGPESLLVYEFVPN  349 (363)
Q Consensus       277 lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~~~lv~Ey~~~  349 (363)
                      ||+|+||.||++.. .+++.||+|++...   .......+..|..++..+   +||||++++..+......++||||+++
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~   80 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG   80 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence            69999999999986 45899999999642   122234456677777665   699999999999999999999999999


Q ss_pred             CChhHHhhcCC
Q 017984          350 QSLLDNLFDKM  360 (363)
Q Consensus       350 gsL~~~l~~~~  360 (363)
                      |+|.+++.++.
T Consensus        81 g~L~~~l~~~~   91 (330)
T cd05586          81 GELFWHLQKEG   91 (330)
T ss_pred             ChHHHHHHhcC
Confidence            99999887543

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>PRK10345 hypothetical protein; Provisional

Probab=98.95  E-value=4.2e-09  Score=91.03  Aligned_cols=87  Identities=15%  Similarity=0.229  Sum_probs=68.9

Q ss_pred             CCcCceecccCceEEEEEEcC-CCCEEEEEEeccCChhhHHHHHHHHHHHhcC-----CCCCccceeeEEEeCC---eeE
Q 017984          271 FHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYNTTQWVDHFFNEVNLISGI-----NHKNLVKLLGCSITGP---ESL  341 (363)
Q Consensus       271 ~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-----~h~niv~l~~~~~~~~---~~~  341 (363)
                      +....+||+|+|+.||.  .+ ++.. +||++........+.+.+|+.++..+     +||||++++|++.++.   .++
T Consensus         4 L~~~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~   80 (210)
T PRK10345          4 LSEQSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVY   80 (210)
T ss_pred             cCCcceecCCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEE
Confidence            45677999999999996  43 3444 79988765444567799999999999     5799999999998863   434


Q ss_pred             -EEEEc--cCCCChhHHhhcCC
Q 017984          342 -LVYEF--VPNQSLLDNLFDKM  360 (363)
Q Consensus       342 -lv~Ey--~~~gsL~~~l~~~~  360 (363)
                       +|+||  +++|+|.++|.+..
T Consensus        81 ~~I~e~~G~~~~tL~~~l~~~~  102 (210)
T PRK10345         81 DVIADFDGKPSITLTEFAEQCR  102 (210)
T ss_pred             EEEecCCCCcchhHHHHHHccc
Confidence             78999  66899999997643

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=98.95  E-value=2.9e-09  Score=97.09  Aligned_cols=89  Identities=22%  Similarity=0.356  Sum_probs=73.4

Q ss_pred             cCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCC--hhhHHHHHHHHHHHhcCC-CCCccceeeEEEeCCe-----
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNT--TQWVDHFFNEVNLISGIN-HKNLVKLLGCSITGPE-----  339 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~-----  339 (363)
                      ++|+..+.||+|+||.||++.. .+++.||+|.+....  ......+.+|+.++..++ ||||+++++++...+.     
T Consensus         1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~   80 (295)
T cd07837           1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS   80 (295)
T ss_pred             CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence            3578889999999999999996 468899999886432  223456889999999995 6999999999887665     


Q ss_pred             eEEEEEccCCCChhHHhhc
Q 017984          340 SLLVYEFVPNQSLLDNLFD  358 (363)
Q Consensus       340 ~~lv~Ey~~~gsL~~~l~~  358 (363)
                      .++||||+++ +|.+++..
T Consensus        81 ~~lv~e~~~~-~l~~~~~~   98 (295)
T cd07837          81 LYLVFEYLDS-DLKKFMDS   98 (295)
T ss_pred             EEEEeeccCc-CHHHHHHH
Confidence            8999999986 89888764

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.95  E-value=7.5e-10  Score=106.83  Aligned_cols=83  Identities=29%  Similarity=0.344  Sum_probs=76.1

Q ss_pred             eecccCceEEEEEEcC-CCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEccCCCChhH
Q 017984          276 KLGQGGSGSVYKGTLP-GGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQSLLD  354 (363)
Q Consensus       276 ~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~~~gsL~~  354 (363)
                      +||+|.||.||-|... +...+|||.+...+.+..+.+..||.+.+.|+|+|||+++|.+.+++..-|.||-+|||+|.+
T Consensus       582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSs  661 (1226)
T KOG4279|consen  582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSS  661 (1226)
T ss_pred             EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHH
Confidence            6999999999999964 456899999998777778889999999999999999999999999999999999999999999


Q ss_pred             Hhhc
Q 017984          355 NLFD  358 (363)
Q Consensus       355 ~l~~  358 (363)
                      +|+.
T Consensus       662 LLrs  665 (1226)
T KOG4279|consen  662 LLRS  665 (1226)
T ss_pred             HHHh
Confidence            9874

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=98.95  E-value=2.4e-09  Score=105.76  Aligned_cols=101  Identities=25%  Similarity=0.374  Sum_probs=84.8

Q ss_pred             cccchHHHHHhccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcC-CCCCccceeeEE
Q 017984          257 LNFSYETLEKATNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGI-NHKNLVKLLGCS  334 (363)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~  334 (363)
                      ....++.+..+++-|...+.||.|.+|.||+++. ++++..|+|++..... ..++...|..+++.+ +|||++.++|++
T Consensus         7 ~~~~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d-~deEiE~eynil~~~~~hpnv~~fyg~~   85 (953)
T KOG0587|consen    7 MDIDLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTED-EEEEIELEYNMLKKYSHHPNVATFYGAF   85 (953)
T ss_pred             cccchhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcc-ccHHHHHHHHHHHhccCCCCcceEEEEE
Confidence            3456677788889999999999999999999994 6789999999876433 235678899999988 699999999998


Q ss_pred             Ee-----CCeeEEEEEccCCCChhHHhhc
Q 017984          335 IT-----GPESLLVYEFVPNQSLLDNLFD  358 (363)
Q Consensus       335 ~~-----~~~~~lv~Ey~~~gsL~~~l~~  358 (363)
                      ..     ++.+|||||||.+||..+++.+
T Consensus        86 ~k~~~~~~DqLWLVMEfC~gGSVTDLVKn  114 (953)
T KOG0587|consen   86 IKKDPGNGDQLWLVMEFCGGGSVTDLVKN  114 (953)
T ss_pred             EEecCCCCCeEEEEeeccCCccHHHHHhh
Confidence            74     5689999999999999998764

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=98.94  E-value=3.4e-09  Score=96.04  Aligned_cols=89  Identities=29%  Similarity=0.453  Sum_probs=75.5

Q ss_pred             CCcCceecccCceEEEEEEc-CCCCEEEEEEeccCC--hhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEcc
Q 017984          271 FHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNT--TQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFV  347 (363)
Q Consensus       271 ~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~  347 (363)
                      |+..+.||+|++|.||++.. .+|..|++|++....  ......+.+|+++++.++||||+++++++..++..+++|||+
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~   80 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL   80 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence            45678899999999999986 468999999987542  223456889999999999999999999999999999999999


Q ss_pred             CCCChhHHhhcCC
Q 017984          348 PNQSLLDNLFDKM  360 (363)
Q Consensus       348 ~~gsL~~~l~~~~  360 (363)
                      + ++|.+++....
T Consensus        81 ~-~~l~~~~~~~~   92 (283)
T cd07835          81 D-LDLKKYMDSSP   92 (283)
T ss_pred             C-cCHHHHHhhCC
Confidence            5 68999887644

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=98.94  E-value=4.6e-09  Score=98.32  Aligned_cols=94  Identities=20%  Similarity=0.386  Sum_probs=76.8

Q ss_pred             HhccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCC----
Q 017984          266 KATNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGP----  338 (363)
Q Consensus       266 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----  338 (363)
                      ...++|...+.||+|+||.||++.. .++..||||++...  .......+.+|+.++..++||||+++++++....    
T Consensus        12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   91 (343)
T cd07880          12 EVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDR   91 (343)
T ss_pred             ccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccc
Confidence            3467788999999999999999985 56899999998643  2333456889999999999999999999887653    


Q ss_pred             --eeEEEEEccCCCChhHHhhcCC
Q 017984          339 --ESLLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       339 --~~~lv~Ey~~~gsL~~~l~~~~  360 (363)
                        ..++||||+ +++|.+++...+
T Consensus        92 ~~~~~lv~e~~-~~~l~~~~~~~~  114 (343)
T cd07880          92 FHDFYLVMPFM-GTDLGKLMKHEK  114 (343)
T ss_pred             cceEEEEEecC-CCCHHHHHhcCC
Confidence              458999999 779988886544

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=98.94  E-value=3.8e-09  Score=97.28  Aligned_cols=86  Identities=21%  Similarity=0.391  Sum_probs=72.7

Q ss_pred             CCcCceecccCceEEEEEEcC---CCCEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCccceeeEEEeC--CeeEE
Q 017984          271 FHESNKLGQGGSGSVYKGTLP---GGEAVAVKRLFYNT---TQWVDHFFNEVNLISGINHKNLVKLLGCSITG--PESLL  342 (363)
Q Consensus       271 ~~~~~~lg~G~~g~Vy~~~~~---~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l  342 (363)
                      |...+.||+|+||.||++...   +++.+|+|.+....   ......+.+|+.++.+++||||+++++++...  ...+|
T Consensus         2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   81 (316)
T cd07842           2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYL   81 (316)
T ss_pred             ceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEE
Confidence            667788999999999999963   47899999997632   33346688999999999999999999999987  78999


Q ss_pred             EEEccCCCChhHHhh
Q 017984          343 VYEFVPNQSLLDNLF  357 (363)
Q Consensus       343 v~Ey~~~gsL~~~l~  357 (363)
                      ||||+++ +|.+++.
T Consensus        82 v~e~~~~-~l~~~~~   95 (316)
T cd07842          82 LFDYAEH-DLWQIIK   95 (316)
T ss_pred             EEeCCCc-CHHHHHH
Confidence            9999975 7777664

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=98.94  E-value=3.4e-09  Score=96.41  Aligned_cols=89  Identities=24%  Similarity=0.310  Sum_probs=75.1

Q ss_pred             CCcCceecccCceEEEEEEc----CCCCEEEEEEeccCC----hhhHHHHHHHHHHHhcC-CCCCccceeeEEEeCCeeE
Q 017984          271 FHESNKLGQGGSGSVYKGTL----PGGEAVAVKRLFYNT----TQWVDHFFNEVNLISGI-NHKNLVKLLGCSITGPESL  341 (363)
Q Consensus       271 ~~~~~~lg~G~~g~Vy~~~~----~~g~~vavK~l~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~  341 (363)
                      |...+.||+|++|.||++..    .+++.+|||.++...    ....+.+.+|+.++.++ +||||+++++.+..+...+
T Consensus         2 ~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~   81 (288)
T cd05583           2 FELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLH   81 (288)
T ss_pred             ceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEE
Confidence            56778999999999999874    357889999986431    22345688999999999 5999999999999999999


Q ss_pred             EEEEccCCCChhHHhhcC
Q 017984          342 LVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       342 lv~Ey~~~gsL~~~l~~~  359 (363)
                      +||||+++|+|.+++..+
T Consensus        82 lv~e~~~~~~L~~~~~~~   99 (288)
T cd05583          82 LILDYVNGGELFTHLYQR   99 (288)
T ss_pred             EEEecCCCCcHHHHHhhc
Confidence            999999999999988754

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=98.93  E-value=3.6e-09  Score=96.81  Aligned_cols=91  Identities=25%  Similarity=0.426  Sum_probs=74.9

Q ss_pred             hccCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccCC--hhhHHHHHHHHHHHhcCCCCCccceeeEEEeCC-----
Q 017984          267 ATNYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYNT--TQWVDHFFNEVNLISGINHKNLVKLLGCSITGP-----  338 (363)
Q Consensus       267 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----  338 (363)
                      ..++|+..+.||+|+||.||++... +|+.||+|+++...  ......+.+|+.+++.++||||+++++++....     
T Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~   84 (302)
T cd07864           5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDF   84 (302)
T ss_pred             hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhc
Confidence            4567888999999999999999974 58899999997532  223456789999999999999999999887654     


Q ss_pred             -----eeEEEEEccCCCChhHHhhc
Q 017984          339 -----ESLLVYEFVPNQSLLDNLFD  358 (363)
Q Consensus       339 -----~~~lv~Ey~~~gsL~~~l~~  358 (363)
                           ..+||+||+++ +|..++..
T Consensus        85 ~~~~~~~~lv~e~~~~-~l~~~l~~  108 (302)
T cd07864          85 KKDKGAFYLVFEYMDH-DLMGLLES  108 (302)
T ss_pred             cccCCcEEEEEcccCc-cHHHHHhc
Confidence                 78999999986 77776654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=98.93  E-value=6.5e-09  Score=94.61  Aligned_cols=89  Identities=27%  Similarity=0.382  Sum_probs=69.3

Q ss_pred             CCCcCceecccCceEEEEEEc-C-CCCEEEEEEeccC--ChhhHHHHHHHHHHHhcC---CCCCccceeeEEEe-----C
Q 017984          270 YFHESNKLGQGGSGSVYKGTL-P-GGEAVAVKRLFYN--TTQWVDHFFNEVNLISGI---NHKNLVKLLGCSIT-----G  337 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~~-~-~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~-----~  337 (363)
                      +|...+.||+|+||.||++.. . +++.||+|.++..  .......+.+|+.++..+   +||||+++++++..     .
T Consensus         2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~   81 (290)
T cd07862           2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE   81 (290)
T ss_pred             CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence            577888999999999999985 3 4678999998743  222334567788777765   69999999998752     4


Q ss_pred             CeeEEEEEccCCCChhHHhhcC
Q 017984          338 PESLLVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       338 ~~~~lv~Ey~~~gsL~~~l~~~  359 (363)
                      ..+++||||++ ++|.+++...
T Consensus        82 ~~~~lv~e~~~-~~l~~~~~~~  102 (290)
T cd07862          82 TKLTLVFEHVD-QDLTTYLDKV  102 (290)
T ss_pred             CcEEEEEccCC-CCHHHHHHhC
Confidence            56899999996 5899988653

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=98.92  E-value=3.6e-09  Score=96.48  Aligned_cols=90  Identities=22%  Similarity=0.370  Sum_probs=75.1

Q ss_pred             cCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccCC--hhhHHHHHHHHHHHhcCCCCCccceeeEEEeC--CeeEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYNT--TQWVDHFFNEVNLISGINHKNLVKLLGCSITG--PESLLV  343 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv  343 (363)
                      ++|...+.||+|+||.||++... +++.+++|.++...  ......+.+|+.++.+++||||+++++++...  ...+||
T Consensus         5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv   84 (293)
T cd07843           5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV   84 (293)
T ss_pred             hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence            46778889999999999999975 58899999997532  22234578999999999999999999998877  899999


Q ss_pred             EEccCCCChhHHhhcC
Q 017984          344 YEFVPNQSLLDNLFDK  359 (363)
Q Consensus       344 ~Ey~~~gsL~~~l~~~  359 (363)
                      |||+++ +|.+++...
T Consensus        85 ~e~~~~-~L~~~~~~~   99 (293)
T cd07843          85 MEYVEH-DLKSLMETM   99 (293)
T ss_pred             ehhcCc-CHHHHHHhc
Confidence            999975 998888653

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=98.92  E-value=7.4e-09  Score=90.06  Aligned_cols=90  Identities=34%  Similarity=0.492  Sum_probs=78.8

Q ss_pred             CCcCceecccCceEEEEEEcCC-CCEEEEEEeccCChh-hHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEccC
Q 017984          271 FHESNKLGQGGSGSVYKGTLPG-GEAVAVKRLFYNTTQ-WVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVP  348 (363)
Q Consensus       271 ~~~~~~lg~G~~g~Vy~~~~~~-g~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~~  348 (363)
                      |...+.||+|+++.||++...+ ++.+++|.+...... ..+.+.+|++.+.+++|+|++++++++......++++||++
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE   80 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence            4567789999999999999764 889999999865443 56789999999999999999999999999899999999999


Q ss_pred             CCChhHHhhcCC
Q 017984          349 NQSLLDNLFDKM  360 (363)
Q Consensus       349 ~gsL~~~l~~~~  360 (363)
                      +++|.+++....
T Consensus        81 ~~~L~~~~~~~~   92 (225)
T smart00221       81 GGDLFDYLRKKG   92 (225)
T ss_pred             CCCHHHHHHhcc
Confidence            999999987643

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=98.91  E-value=5.4e-09  Score=94.19  Aligned_cols=88  Identities=27%  Similarity=0.428  Sum_probs=71.5

Q ss_pred             CCcCceecccCceEEEEEEcC----CCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCC------
Q 017984          271 FHESNKLGQGGSGSVYKGTLP----GGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGP------  338 (363)
Q Consensus       271 ~~~~~~lg~G~~g~Vy~~~~~----~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------  338 (363)
                      |...+.||+|+||.||++.+.    +++.||||++...  .....+++.+|+.+++.++||||+++++++...+      
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   80 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP   80 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence            456778999999999999852    3678999998753  3344667999999999999999999999876532      


Q ss_pred             eeEEEEEccCCCChhHHhhc
Q 017984          339 ESLLVYEFVPNQSLLDNLFD  358 (363)
Q Consensus       339 ~~~lv~Ey~~~gsL~~~l~~  358 (363)
                      ..++++||+++|+|.+++..
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~  100 (273)
T cd05074          81 IPMVILPFMKHGDLHTFLLM  100 (273)
T ss_pred             ceEEEEecCCCCcHHHHHHH
Confidence            24789999999999988753

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=98.91  E-value=2.5e-09  Score=97.00  Aligned_cols=87  Identities=26%  Similarity=0.421  Sum_probs=73.6

Q ss_pred             CCcCceecccCceEEEEEEc-CCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEcc
Q 017984          271 FHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFV  347 (363)
Q Consensus       271 ~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~  347 (363)
                      |...+.||+|+||.||++.. .+|+.+|+|+++..  .......+.+|+.++++++||||+++++++......++|+||+
T Consensus         2 y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   81 (284)
T cd07839           2 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEYC   81 (284)
T ss_pred             ceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEecC
Confidence            66778899999999999996 46889999998643  2222356889999999999999999999999999999999999


Q ss_pred             CCCChhHHhhc
Q 017984          348 PNQSLLDNLFD  358 (363)
Q Consensus       348 ~~gsL~~~l~~  358 (363)
                      + ++|.+++..
T Consensus        82 ~-~~l~~~~~~   91 (284)
T cd07839          82 D-QDLKKYFDS   91 (284)
T ss_pred             C-CCHHHHHHh
Confidence            7 488887764

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=98.91  E-value=5.3e-09  Score=94.74  Aligned_cols=88  Identities=24%  Similarity=0.411  Sum_probs=74.8

Q ss_pred             CCcCceecccCceEEEEEEcC-CCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeC--CeeEEEEE
Q 017984          271 FHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITG--PESLLVYE  345 (363)
Q Consensus       271 ~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv~E  345 (363)
                      |...+.||+|++|.||++... +++.+|+|.+...  .......+.+|++++.+++|||++++++++...  +..++|+|
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e   80 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE   80 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence            456778999999999999964 5889999999765  233446689999999999999999999999887  89999999


Q ss_pred             ccCCCChhHHhhcC
Q 017984          346 FVPNQSLLDNLFDK  359 (363)
Q Consensus       346 y~~~gsL~~~l~~~  359 (363)
                      |+++ +|.+++...
T Consensus        81 ~~~~-~l~~~~~~~   93 (287)
T cd07840          81 YMDH-DLTGLLDSP   93 (287)
T ss_pred             cccc-cHHHHHhcc
Confidence            9975 898888654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=98.91  E-value=6e-09  Score=98.14  Aligned_cols=90  Identities=24%  Similarity=0.352  Sum_probs=73.5

Q ss_pred             hccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCC-----
Q 017984          267 ATNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGP-----  338 (363)
Q Consensus       267 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----  338 (363)
                      ..++|...+.||+|+||.||++.. .+|+.||+|++...  .......+.+|+.++..++||||+++++++....     
T Consensus        19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~   98 (359)
T cd07876          19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF   98 (359)
T ss_pred             hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence            457788999999999999999986 45889999999643  3344567889999999999999999999886543     


Q ss_pred             -eeEEEEEccCCCChhHHhh
Q 017984          339 -ESLLVYEFVPNQSLLDNLF  357 (363)
Q Consensus       339 -~~~lv~Ey~~~gsL~~~l~  357 (363)
                       ..++||||+++ +|.+.+.
T Consensus        99 ~~~~lv~e~~~~-~l~~~~~  117 (359)
T cd07876          99 QDVYLVMELMDA-NLCQVIH  117 (359)
T ss_pred             ceeEEEEeCCCc-CHHHHHh
Confidence             57999999976 5666554

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=98.91  E-value=5.5e-09  Score=97.33  Aligned_cols=86  Identities=23%  Similarity=0.290  Sum_probs=71.4

Q ss_pred             cCceecccCceEEEEEEc-CCCCEEEEEEeccCChhh--------------HHHHHHHHHHHhcCCCCCccceeeEEEeC
Q 017984          273 ESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQW--------------VDHFFNEVNLISGINHKNLVKLLGCSITG  337 (363)
Q Consensus       273 ~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~--------------~~~~~~E~~~l~~l~h~niv~l~~~~~~~  337 (363)
                      ..+.||+|+||.||++.. .+++.||+|.++......              ...+.+|++++..++||||+++++++...
T Consensus        13 ~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   92 (335)
T PTZ00024         13 KGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVEG   92 (335)
T ss_pred             hhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEecC
Confidence            456799999999999996 468899999986432111              12478999999999999999999999999


Q ss_pred             CeeEEEEEccCCCChhHHhhcC
Q 017984          338 PESLLVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       338 ~~~~lv~Ey~~~gsL~~~l~~~  359 (363)
                      +..++||||++ |+|.+++..+
T Consensus        93 ~~~~lv~e~~~-~~l~~~l~~~  113 (335)
T PTZ00024         93 DFINLVMDIMA-SDLKKVVDRK  113 (335)
T ss_pred             CcEEEEEeccc-cCHHHHHHhc
Confidence            99999999997 5899988654

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=98.91  E-value=4.9e-09  Score=93.02  Aligned_cols=83  Identities=33%  Similarity=0.389  Sum_probs=72.8

Q ss_pred             ecccCceEEEEEEcC-CCCEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEccCCCCh
Q 017984          277 LGQGGSGSVYKGTLP-GGEAVAVKRLFYNT---TQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQSL  352 (363)
Q Consensus       277 lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~~~gsL  352 (363)
                      ||+|+||.||++... +++.+++|.+....   ......+.+|+.++++++||||+++++.+..++..++||||+++++|
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L   80 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL   80 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence            689999999999964 58899999987542   23456799999999999999999999999999999999999999999


Q ss_pred             hHHhhcC
Q 017984          353 LDNLFDK  359 (363)
Q Consensus       353 ~~~l~~~  359 (363)
                      .+++...
T Consensus        81 ~~~l~~~   87 (250)
T cd05123          81 FSHLSKE   87 (250)
T ss_pred             HHHHHhc
Confidence            9998765

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=98.90  E-value=1.3e-08  Score=93.95  Aligned_cols=87  Identities=30%  Similarity=0.448  Sum_probs=73.0

Q ss_pred             CCcCceecccCceEEEEEEc-CCCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEc
Q 017984          271 FHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       271 ~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      |...+.||+|+||.||++.. .+++.+++|.+...   .......+.+|+++++.++|||++++++++......++||||
T Consensus        23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  102 (313)
T cd06633          23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY  102 (313)
T ss_pred             hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence            45567799999999999986 45889999998643   223445789999999999999999999999999999999999


Q ss_pred             cCCCChhHHhhc
Q 017984          347 VPNQSLLDNLFD  358 (363)
Q Consensus       347 ~~~gsL~~~l~~  358 (363)
                      ++ |+|.+++..
T Consensus       103 ~~-~~l~~~l~~  113 (313)
T cd06633         103 CL-GSASDLLEV  113 (313)
T ss_pred             CC-CCHHHHHHh
Confidence            96 577777754

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=98.90  E-value=1.1e-08  Score=91.62  Aligned_cols=85  Identities=19%  Similarity=0.155  Sum_probs=68.0

Q ss_pred             ceecccCceEEEEEEc-CCCCEEEEEEeccCCh---hhHHHHHHHHHHH-hcCCCCCccceeeEEEeCCeeEEEEEccCC
Q 017984          275 NKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTT---QWVDHFFNEVNLI-SGINHKNLVKLLGCSITGPESLLVYEFVPN  349 (363)
Q Consensus       275 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~E~~~l-~~l~h~niv~l~~~~~~~~~~~lv~Ey~~~  349 (363)
                      +.||+|+||.||++.. .+++.||+|.++....   .....+..|..++ ...+|+||+++++++...+..++|+||+++
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   81 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG   81 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence            4689999999999986 4588999999865421   2223455565554 445899999999999999999999999999


Q ss_pred             CChhHHhhcC
Q 017984          350 QSLLDNLFDK  359 (363)
Q Consensus       350 gsL~~~l~~~  359 (363)
                      ++|.+++...
T Consensus        82 ~~L~~~l~~~   91 (260)
T cd05611          82 GDCASLIKTL   91 (260)
T ss_pred             CCHHHHHHHc
Confidence            9999998754

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=98.89  E-value=5.6e-09  Score=97.62  Aligned_cols=93  Identities=22%  Similarity=0.278  Sum_probs=75.1

Q ss_pred             hccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeC------
Q 017984          267 ATNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITG------  337 (363)
Q Consensus       267 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------  337 (363)
                      ..++|...+.||+|+||.||++.. .+++.||||++...  .......+.+|+.++..++||||+++++++...      
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   92 (343)
T cd07878          13 VPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENF   92 (343)
T ss_pred             hhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccccc
Confidence            346788899999999999999986 56889999998753  223345688999999999999999999887543      


Q ss_pred             CeeEEEEEccCCCChhHHhhcCC
Q 017984          338 PESLLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       338 ~~~~lv~Ey~~~gsL~~~l~~~~  360 (363)
                      ...++++|++ +++|.+++....
T Consensus        93 ~~~~~~~~~~-~~~l~~~~~~~~  114 (343)
T cd07878          93 NEVYLVTNLM-GADLNNIVKCQK  114 (343)
T ss_pred             CcEEEEeecC-CCCHHHHHhcCC
Confidence            4578999998 779988876544

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=98.89  E-value=4.9e-09  Score=96.25  Aligned_cols=90  Identities=33%  Similarity=0.563  Sum_probs=73.2

Q ss_pred             cCCCcCceecccCceEEEEEEc-CCCC----EEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL-PGGE----AVAVKRLFYNT-TQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLL  342 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~----~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  342 (363)
                      ++|...+.||+|+||.||++.. .+|.    .+|+|.+.... .....++.+|+.++..++||||+++++++... ..++
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~   85 (303)
T cd05110           7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQL   85 (303)
T ss_pred             hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Ccee
Confidence            4567788999999999999985 3444    57889886542 33345789999999999999999999988754 4679


Q ss_pred             EEEccCCCChhHHhhcC
Q 017984          343 VYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       343 v~Ey~~~gsL~~~l~~~  359 (363)
                      ++||+++|+|.+++..+
T Consensus        86 v~e~~~~g~l~~~~~~~  102 (303)
T cd05110          86 VTQLMPHGCLLDYVHEH  102 (303)
T ss_pred             eehhcCCCCHHHHHHhc
Confidence            99999999999998754

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=98.89  E-value=2.6e-09  Score=95.95  Aligned_cols=93  Identities=22%  Similarity=0.373  Sum_probs=77.8

Q ss_pred             hccCCCcCceecccCceEEEEEEc-CCCCEEEEEEec--cCChhhHHHHHHHHHHHhcCCCCCccceeeEEEe-----CC
Q 017984          267 ATNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLF--YNTTQWVDHFFNEVNLISGINHKNLVKLLGCSIT-----GP  338 (363)
Q Consensus       267 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~--~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-----~~  338 (363)
                      ....|...+.||+|+||.|.++.. ++|+.||||++.  ....-..++-.+|+.+|+.++|+||+.+...+..     -+
T Consensus        20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~   99 (359)
T KOG0660|consen   20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFN   99 (359)
T ss_pred             ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccc
Confidence            344556678999999999999986 568999999997  3455556778999999999999999999998876     35


Q ss_pred             eeEEEEEccCCCChhHHhhcCC
Q 017984          339 ESLLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       339 ~~~lv~Ey~~~gsL~~~l~~~~  360 (363)
                      .+|+|+|+|+ -||.+.|+.+.
T Consensus       100 DvYiV~elMe-tDL~~iik~~~  120 (359)
T KOG0660|consen  100 DVYLVFELME-TDLHQIIKSQQ  120 (359)
T ss_pred             eeEEehhHHh-hHHHHHHHcCc
Confidence            7999999995 49999998765

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=98.88  E-value=8e-09  Score=95.06  Aligned_cols=90  Identities=26%  Similarity=0.398  Sum_probs=73.9

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCC--hhhHHHHHHHHHHHhcCCCCCccceeeEEEeC--CeeEE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNT--TQWVDHFFNEVNLISGINHKNLVKLLGCSITG--PESLL  342 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l  342 (363)
                      .++|...+.||+|+||.||++.. .+|+.||+|.++...  ......+.+|+.++.+++|+||+++++++...  +..++
T Consensus         6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   85 (309)
T cd07845           6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL   85 (309)
T ss_pred             ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence            46788899999999999999996 458999999987432  22233567899999999999999999998754  56899


Q ss_pred             EEEccCCCChhHHhhc
Q 017984          343 VYEFVPNQSLLDNLFD  358 (363)
Q Consensus       343 v~Ey~~~gsL~~~l~~  358 (363)
                      ||||+++ +|.+++..
T Consensus        86 v~e~~~~-~l~~~l~~  100 (309)
T cd07845          86 VMEYCEQ-DLASLLDN  100 (309)
T ss_pred             EEecCCC-CHHHHHHh
Confidence            9999975 88888764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=98.88  E-value=3.4e-09  Score=106.29  Aligned_cols=98  Identities=28%  Similarity=0.357  Sum_probs=83.2

Q ss_pred             HHHHhccCCCcCceecccCceEEEEEEcC----C----CCEEEEEEeccC-ChhhHHHHHHHHHHHhcC-CCCCccceee
Q 017984          263 TLEKATNYFHESNKLGQGGSGSVYKGTLP----G----GEAVAVKRLFYN-TTQWVDHFFNEVNLISGI-NHKNLVKLLG  332 (363)
Q Consensus       263 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~----~----g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~  332 (363)
                      .++...+++...+.||+|.||.|++|...    .    ...||||.++.. .....+.+..|+.+|..+ +|+||+.++|
T Consensus       290 ~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG  369 (609)
T KOG0200|consen  290 KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLG  369 (609)
T ss_pred             ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhhee
Confidence            45556666677779999999999999842    1    347999999854 335567899999999999 6999999999


Q ss_pred             EEEeCCeeEEEEEccCCCChhHHhhcCC
Q 017984          333 CSITGPESLLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       333 ~~~~~~~~~lv~Ey~~~gsL~~~l~~~~  360 (363)
                      ++...+.+++|+||+.+|+|.++|+.++
T Consensus       370 ~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r  397 (609)
T KOG0200|consen  370 ACTQDGPLYVIVEYAEHGDLLEFLRKKR  397 (609)
T ss_pred             eeccCCceEEEEEeccCCcHHHHHHhcc
Confidence            9999999999999999999999999876

>PTZ00036 glycogen synthase kinase; Provisional

Probab=98.88  E-value=7.2e-09  Score=100.29  Aligned_cols=86  Identities=23%  Similarity=0.351  Sum_probs=68.7

Q ss_pred             hccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeC--------
Q 017984          267 ATNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITG--------  337 (363)
Q Consensus       267 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--------  337 (363)
                      ...+|...+.||+|+||.||++.. .+++.||||++....    ....+|+.+|+.++||||+++++++...        
T Consensus        64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~  139 (440)
T PTZ00036         64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKN  139 (440)
T ss_pred             cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCc
Confidence            346788999999999999999996 468899999886432    2245799999999999999999876432        


Q ss_pred             CeeEEEEEccCCCChhHHhh
Q 017984          338 PESLLVYEFVPNQSLLDNLF  357 (363)
Q Consensus       338 ~~~~lv~Ey~~~gsL~~~l~  357 (363)
                      ..+++||||+++ +|.+++.
T Consensus       140 ~~l~lvmE~~~~-~l~~~~~  158 (440)
T PTZ00036        140 IFLNVVMEFIPQ-TVHKYMK  158 (440)
T ss_pred             eEEEEEEecCCc-cHHHHHH
Confidence            246799999985 7776664

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=98.87  E-value=5.6e-09  Score=97.68  Aligned_cols=91  Identities=24%  Similarity=0.371  Sum_probs=76.2

Q ss_pred             cCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeC----------
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITG----------  337 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~----------  337 (363)
                      .+|...+.||.|+||.||++.. .+|+.||+|.+........+.+.+|++++++++||||+++++++...          
T Consensus         5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~   84 (342)
T cd07854           5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS   84 (342)
T ss_pred             cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence            5688899999999999999986 46889999999766555567789999999999999999999776543          


Q ss_pred             ----CeeEEEEEccCCCChhHHhhcCC
Q 017984          338 ----PESLLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       338 ----~~~~lv~Ey~~~gsL~~~l~~~~  360 (363)
                          ...++||||++ ++|.+++....
T Consensus        85 ~~~~~~~~lv~e~~~-~~L~~~~~~~~  110 (342)
T cd07854          85 LTELNSVYIVQEYME-TDLANVLEQGP  110 (342)
T ss_pred             ccccceEEEEeeccc-ccHHHHHHcCC
Confidence                35789999997 58988886544

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>PHA03211 serine/threonine kinase US3; Provisional

Probab=98.87  E-value=7.9e-09  Score=100.22  Aligned_cols=85  Identities=24%  Similarity=0.315  Sum_probs=72.9

Q ss_pred             ccCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEc
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      ..+|...+.||+|+||.||++... .++.||||....      ..+.+|+++|++++|+|||++++++..++..+||||+
T Consensus       168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~  241 (461)
T PHA03211        168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPK  241 (461)
T ss_pred             cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEc
Confidence            457888999999999999999974 478999996432      3467899999999999999999999999999999999


Q ss_pred             cCCCChhHHhhcC
Q 017984          347 VPNQSLLDNLFDK  359 (363)
Q Consensus       347 ~~~gsL~~~l~~~  359 (363)
                      +. ++|.+++...
T Consensus       242 ~~-~~L~~~l~~~  253 (461)
T PHA03211        242 YR-SDLYTYLGAR  253 (461)
T ss_pred             cC-CCHHHHHHhc
Confidence            95 6898888653

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=98.87  E-value=1.1e-09  Score=93.69  Aligned_cols=92  Identities=21%  Similarity=0.339  Sum_probs=80.8

Q ss_pred             hccCCCcCceecccCceEEEEEE-cCCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeC-----Cee
Q 017984          267 ATNYFHESNKLGQGGSGSVYKGT-LPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITG-----PES  340 (363)
Q Consensus       267 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~  340 (363)
                      ..++|...+.||+|||+.||.++ +.++..+|+|++.....+..+..++|++..++++||||++++++...+     .+.
T Consensus        19 n~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~   98 (302)
T KOG2345|consen   19 NNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEA   98 (302)
T ss_pred             cCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeE
Confidence            34568888999999999999998 577899999999877777788899999999999999999999876543     359


Q ss_pred             EEEEEccCCCChhHHhhc
Q 017984          341 LLVYEFVPNQSLLDNLFD  358 (363)
Q Consensus       341 ~lv~Ey~~~gsL~~~l~~  358 (363)
                      ||+++|...|+|.+.|..
T Consensus        99 yll~Pyy~~Gsl~d~i~~  116 (302)
T KOG2345|consen   99 YLLLPYYKRGSLLDEIER  116 (302)
T ss_pred             EEEeehhccccHHHHHHH
Confidence            999999999999998864

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=98.86  E-value=1.5e-08  Score=91.89  Aligned_cols=85  Identities=21%  Similarity=0.159  Sum_probs=66.1

Q ss_pred             eecccCceEEEEEEc-CCCCEEEEEEeccCC---hhhHHHHHHHHHHHh---cCCCCCccceeeEEEeCCeeEEEEEccC
Q 017984          276 KLGQGGSGSVYKGTL-PGGEAVAVKRLFYNT---TQWVDHFFNEVNLIS---GINHKNLVKLLGCSITGPESLLVYEFVP  348 (363)
Q Consensus       276 ~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~---~l~h~niv~l~~~~~~~~~~~lv~Ey~~  348 (363)
                      +||+|+||.||++.. .+++.+|+|.+....   ......+.+|..++.   ..+||||+.+.+.+..++..++||||++
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   80 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN   80 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence            489999999999996 458899999986431   122233455554433   4479999999999999999999999999


Q ss_pred             CCChhHHhhcCC
Q 017984          349 NQSLLDNLFDKM  360 (363)
Q Consensus       349 ~gsL~~~l~~~~  360 (363)
                      +|+|.+++..+.
T Consensus        81 ~~~L~~~i~~~~   92 (279)
T cd05633          81 GGDLHYHLSQHG   92 (279)
T ss_pred             CCCHHHHHHhcC
Confidence            999999887543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=98.86  E-value=1.4e-08  Score=95.19  Aligned_cols=99  Identities=21%  Similarity=0.288  Sum_probs=79.6

Q ss_pred             hHHHHHhccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeC
Q 017984          261 YETLEKATNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITG  337 (363)
Q Consensus       261 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~  337 (363)
                      ..++...+++|...+.||+|+||.||++.. .+++.||+|++...  .....+.+.+|+.++.+++||||+++++++...
T Consensus         9 ~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~   88 (345)
T cd07877           9 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA   88 (345)
T ss_pred             HHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeec
Confidence            355666788999999999999999999985 56889999999753  223345688999999999999999999987643


Q ss_pred             ------CeeEEEEEccCCCChhHHhhcCC
Q 017984          338 ------PESLLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       338 ------~~~~lv~Ey~~~gsL~~~l~~~~  360 (363)
                            ...++++|++ +++|.+++..+.
T Consensus        89 ~~~~~~~~~~lv~~~~-~~~L~~~~~~~~  116 (345)
T cd07877          89 RSLEEFNDVYLVTHLM-GADLNNIVKCQK  116 (345)
T ss_pred             ccccccccEEEEehhc-ccCHHHHHhcCC
Confidence                  3467888887 789988876543

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=98.86  E-value=9.8e-09  Score=95.72  Aligned_cols=92  Identities=18%  Similarity=0.341  Sum_probs=75.6

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeC-----Cee
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITG-----PES  340 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~  340 (363)
                      .++|...+.||+|+||.||++.. .+|+.||+|.+... .......+.+|+.++.+++||||+++++++...     ...
T Consensus         4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~   83 (336)
T cd07849           4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV   83 (336)
T ss_pred             ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence            46788999999999999999985 56899999998643 334456788999999999999999999886654     358


Q ss_pred             EEEEEccCCCChhHHhhcCC
Q 017984          341 LLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       341 ~lv~Ey~~~gsL~~~l~~~~  360 (363)
                      ++|+||+++ +|.+++....
T Consensus        84 ~lv~e~~~~-~l~~~~~~~~  102 (336)
T cd07849          84 YIVQELMET-DLYKLIKTQH  102 (336)
T ss_pred             EEEehhccc-CHHHHHhcCC
Confidence            999999975 8888776544

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=98.86  E-value=6.2e-09  Score=94.28  Aligned_cols=88  Identities=28%  Similarity=0.363  Sum_probs=73.5

Q ss_pred             CCcCceecccCceEEEEEEcC-CCCEEEEEEeccCCh-hhHHHHHHHHHHHhcCC-CCCccceeeEEEeCCeeEEEEEcc
Q 017984          271 FHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYNTT-QWVDHFFNEVNLISGIN-HKNLVKLLGCSITGPESLLVYEFV  347 (363)
Q Consensus       271 ~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~Ey~  347 (363)
                      |+..+.||+|++|.||+|... +++.|+||++..... .......+|+..+.+++ ||||+++++++..++..++||||+
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~   80 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM   80 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence            456788999999999999975 478999999865422 22334567999999999 999999999999999999999999


Q ss_pred             CCCChhHHhhcC
Q 017984          348 PNQSLLDNLFDK  359 (363)
Q Consensus       348 ~~gsL~~~l~~~  359 (363)
                       +|+|.+++...
T Consensus        81 -~~~l~~~~~~~   91 (283)
T cd07830          81 -EGNLYQLMKDR   91 (283)
T ss_pred             -CCCHHHHHHhc
Confidence             78999988764

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=98.85  E-value=1.2e-08  Score=93.82  Aligned_cols=87  Identities=26%  Similarity=0.448  Sum_probs=72.9

Q ss_pred             CCcCceecccCceEEEEEEc-CCCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEc
Q 017984          271 FHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       271 ~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      |...+.||+|+||.||++.. .+++.+++|.+...   ......++.+|+++++.++|+|++++++++......++||||
T Consensus        17 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   96 (308)
T cd06634          17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY   96 (308)
T ss_pred             HHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEEc
Confidence            55667899999999999996 45789999998642   333455788999999999999999999999999999999999


Q ss_pred             cCCCChhHHhhc
Q 017984          347 VPNQSLLDNLFD  358 (363)
Q Consensus       347 ~~~gsL~~~l~~  358 (363)
                      +. |+|.+++..
T Consensus        97 ~~-~~l~~~~~~  107 (308)
T cd06634          97 CL-GSASDLLEV  107 (308)
T ss_pred             cC-CCHHHHHHH
Confidence            97 588777643

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=98.84  E-value=1.4e-08  Score=91.86  Aligned_cols=88  Identities=18%  Similarity=0.289  Sum_probs=70.9

Q ss_pred             CCcCceecccCceEEEEEEc-CCCCEEEEEEeccC-ChhhHHHHHHHHHHHhcCC-CCCccceeeEEEeC--CeeEEEEE
Q 017984          271 FHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN-TTQWVDHFFNEVNLISGIN-HKNLVKLLGCSITG--PESLLVYE  345 (363)
Q Consensus       271 ~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~--~~~~lv~E  345 (363)
                      |...+.||+|+||.||++.. .+++.+|+|+++.. .........+|+.++.++. |+||+++++++.+.  +..++|||
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e   80 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE   80 (282)
T ss_pred             CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence            45677899999999999996 46889999998753 2222234568999999985 99999999999987  88999999


Q ss_pred             ccCCCChhHHhhcC
Q 017984          346 FVPNQSLLDNLFDK  359 (363)
Q Consensus       346 y~~~gsL~~~l~~~  359 (363)
                      |++ |+|.+++.+.
T Consensus        81 ~~~-~~l~~~l~~~   93 (282)
T cd07831          81 LMD-MNLYELIKGR   93 (282)
T ss_pred             cCC-ccHHHHHHhc
Confidence            997 5888887653

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=98.84  E-value=1.1e-08  Score=94.36  Aligned_cols=84  Identities=17%  Similarity=0.102  Sum_probs=69.3

Q ss_pred             ceecccCceEEEEEEcCCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEccCCCCh
Q 017984          275 NKLGQGGSGSVYKGTLPGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQSL  352 (363)
Q Consensus       275 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~~~gsL  352 (363)
                      +.+|.|+++.|+++.. +++.||||++...  .....+.+.+|+.++..++||||+++++++...+..+++|||+++|+|
T Consensus         8 ~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l   86 (314)
T cd08216           8 KCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSC   86 (314)
T ss_pred             HhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCH
Confidence            3445556666666655 6889999999754  344567899999999999999999999999999999999999999999


Q ss_pred             hHHhhcC
Q 017984          353 LDNLFDK  359 (363)
Q Consensus       353 ~~~l~~~  359 (363)
                      .+++.++
T Consensus        87 ~~~l~~~   93 (314)
T cd08216          87 EDLLKTH   93 (314)
T ss_pred             HHHHHHh
Confidence            9998753

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=98.83  E-value=5.4e-09  Score=100.52  Aligned_cols=91  Identities=23%  Similarity=0.346  Sum_probs=77.4

Q ss_pred             CCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcCC-C-----CCccceeeEEEeCCeeEE
Q 017984          270 YFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGIN-H-----KNLVKLLGCSITGPESLL  342 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h-----~niv~l~~~~~~~~~~~l  342 (363)
                      .|.+.+.||+|.||.|.|+.. .+++.||||+++... ....+-..|+.+|..|+ |     -|+|++++++...++++|
T Consensus       187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k-~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci  265 (586)
T KOG0667|consen  187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK-RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI  265 (586)
T ss_pred             EEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh-HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence            577899999999999999996 569999999997543 33445678999999886 4     499999999999999999


Q ss_pred             EEEccCCCChhHHhhcCCCC
Q 017984          343 VYEFVPNQSLLDNLFDKMLS  362 (363)
Q Consensus       343 v~Ey~~~gsL~~~l~~~~~~  362 (363)
                      |+|.+.. +|.++|..+...
T Consensus       266 VfELL~~-NLYellK~n~f~  284 (586)
T KOG0667|consen  266 VFELLST-NLYELLKNNKFR  284 (586)
T ss_pred             eehhhhh-hHHHHHHhcCCC
Confidence            9999965 999999987654

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=98.83  E-value=1.5e-08  Score=95.58  Aligned_cols=90  Identities=21%  Similarity=0.313  Sum_probs=73.4

Q ss_pred             hccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeC------
Q 017984          267 ATNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITG------  337 (363)
Q Consensus       267 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------  337 (363)
                      ..++|...+.||+|+||.||++.. ..++.||||++...  .......+.+|+.+++.++||||+++++++...      
T Consensus        22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~  101 (364)
T cd07875          22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF  101 (364)
T ss_pred             hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence            456789999999999999999986 45889999999753  333456788999999999999999999987543      


Q ss_pred             CeeEEEEEccCCCChhHHhh
Q 017984          338 PESLLVYEFVPNQSLLDNLF  357 (363)
Q Consensus       338 ~~~~lv~Ey~~~gsL~~~l~  357 (363)
                      ...++||||+++ +|.+++.
T Consensus       102 ~~~~lv~e~~~~-~l~~~~~  120 (364)
T cd07875         102 QDVYIVMELMDA-NLCQVIQ  120 (364)
T ss_pred             CeEEEEEeCCCC-CHHHHHH
Confidence            357999999975 6777664

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=98.83  E-value=1.7e-08  Score=93.18  Aligned_cols=81  Identities=20%  Similarity=0.328  Sum_probs=66.2

Q ss_pred             CceecccCceEEEEEEcC---CCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEe--CCeeEEEEEccC
Q 017984          274 SNKLGQGGSGSVYKGTLP---GGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSIT--GPESLLVYEFVP  348 (363)
Q Consensus       274 ~~~lg~G~~g~Vy~~~~~---~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv~Ey~~  348 (363)
                      ..+||+|+||.||++...   +++.+|+|.+....  ....+.+|+.++++++||||+++++++..  +...++||||++
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~   83 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE   83 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence            468999999999999853   46789999986532  23457899999999999999999998854  456899999996


Q ss_pred             CCChhHHhh
Q 017984          349 NQSLLDNLF  357 (363)
Q Consensus       349 ~gsL~~~l~  357 (363)
                      + +|.+++.
T Consensus        84 ~-~l~~~~~   91 (317)
T cd07868          84 H-DLWHIIK   91 (317)
T ss_pred             C-CHHHHHH
Confidence            5 8888775

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=98.83  E-value=1e-08  Score=95.64  Aligned_cols=92  Identities=26%  Similarity=0.408  Sum_probs=75.1

Q ss_pred             hccCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccC--ChhhHHHHHHHHHHHhcC-CCCCccceeeEEEeC--Cee
Q 017984          267 ATNYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYN--TTQWVDHFFNEVNLISGI-NHKNLVKLLGCSITG--PES  340 (363)
Q Consensus       267 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~--~~~  340 (363)
                      ..++|...+.||+|+||.||++... +++.+|+|++...  .......+.+|+.++.++ +||||+++++++...  ...
T Consensus         5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~   84 (337)
T cd07852           5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI   84 (337)
T ss_pred             hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence            3456788889999999999999964 5889999988542  233445688999999999 999999999988653  468


Q ss_pred             EEEEEccCCCChhHHhhcC
Q 017984          341 LLVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       341 ~lv~Ey~~~gsL~~~l~~~  359 (363)
                      ++||||++ ++|.+++...
T Consensus        85 ~lv~e~~~-~~L~~~~~~~  102 (337)
T cd07852          85 YLVFEYME-TDLHAVIRAN  102 (337)
T ss_pred             EEEecccc-cCHHHHHhcC
Confidence            99999997 5999988654

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.83  E-value=1.5e-09  Score=96.21  Aligned_cols=92  Identities=23%  Similarity=0.191  Sum_probs=79.6

Q ss_pred             cCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVY  344 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  344 (363)
                      ++|...++||+|.||.|..+.- .+++.+|+|++++.   .+.....-+.|-++|+..+||.+..|.-.+...+++++||
T Consensus       168 ~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVM  247 (516)
T KOG0690|consen  168 EDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVM  247 (516)
T ss_pred             chhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEE
Confidence            4566778999999999999985 46899999999864   4445556788999999999999999999999999999999


Q ss_pred             EccCCCChhHHhhcCC
Q 017984          345 EFVPNQSLLDNLFDKM  360 (363)
Q Consensus       345 Ey~~~gsL~~~l~~~~  360 (363)
                      ||..||.|..+|...+
T Consensus       248 eyanGGeLf~HLsrer  263 (516)
T KOG0690|consen  248 EYANGGELFFHLSRER  263 (516)
T ss_pred             EEccCceEeeehhhhh
Confidence            9999999999887654

>PHA03209 serine/threonine kinase US3; Provisional

Probab=98.83  E-value=1.4e-08  Score=95.69  Aligned_cols=86  Identities=20%  Similarity=0.292  Sum_probs=72.6

Q ss_pred             hccCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEE
Q 017984          267 ATNYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYE  345 (363)
Q Consensus       267 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  345 (363)
                      ...+|...+.||+|+||.||++... +++.||+|.....      ....|+.++.+++||||+++++++......++|+|
T Consensus        64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  137 (357)
T PHA03209         64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLP  137 (357)
T ss_pred             hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEE
Confidence            3457899999999999999999974 4778999975432      23579999999999999999999999999999999


Q ss_pred             ccCCCChhHHhhcC
Q 017984          346 FVPNQSLLDNLFDK  359 (363)
Q Consensus       346 y~~~gsL~~~l~~~  359 (363)
                      |+. ++|.+++...
T Consensus       138 ~~~-~~l~~~l~~~  150 (357)
T PHA03209        138 HYS-SDLYTYLTKR  150 (357)
T ss_pred             ccC-CcHHHHHHhc
Confidence            995 5898888653

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.82  E-value=2.5e-09  Score=102.28  Aligned_cols=90  Identities=18%  Similarity=0.294  Sum_probs=74.9

Q ss_pred             CcCceecccCceEEEEEEcC-CCCEEEEEEecc----CChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCe--eEEEE
Q 017984          272 HESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFY----NTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPE--SLLVY  344 (363)
Q Consensus       272 ~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~----~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~--~~lv~  344 (363)
                      ....+||+|.|-+||||... +|.+||.-.++.    .+....++|..|+++|+.|+|||||+++..|.+...  +-+|+
T Consensus        43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iT  122 (632)
T KOG0584|consen   43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFIT  122 (632)
T ss_pred             ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeee
Confidence            45668999999999999974 477887655432    355567889999999999999999999999987654  78999


Q ss_pred             EccCCCChhHHhhcCCC
Q 017984          345 EFVPNQSLLDNLFDKML  361 (363)
Q Consensus       345 Ey~~~gsL~~~l~~~~~  361 (363)
                      |.|..|+|..|+.+.+.
T Consensus       123 EL~TSGtLr~Y~kk~~~  139 (632)
T KOG0584|consen  123 ELFTSGTLREYRKKHRR  139 (632)
T ss_pred             ecccCCcHHHHHHHhcc
Confidence            99999999999987653

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=98.82  E-value=6.7e-09  Score=92.92  Aligned_cols=88  Identities=19%  Similarity=0.220  Sum_probs=70.6

Q ss_pred             CCcCceecccCceEEEEEEcC-CCCEEEEEEecc---C--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEE
Q 017984          271 FHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFY---N--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVY  344 (363)
Q Consensus       271 ~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~---~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  344 (363)
                      |...+.||+|+||.||++... .+..+++|.++.   .  .......+.+|+.++.+++||||+++++++.+....++||
T Consensus         2 y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   81 (260)
T cd08222           2 YILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCIIT   81 (260)
T ss_pred             ceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEEE
Confidence            667789999999999999863 344455555542   1  2233445778999999999999999999999999999999


Q ss_pred             EccCCCChhHHhhc
Q 017984          345 EFVPNQSLLDNLFD  358 (363)
Q Consensus       345 Ey~~~gsL~~~l~~  358 (363)
                      ||+++++|.+++..
T Consensus        82 e~~~~~~l~~~~~~   95 (260)
T cd08222          82 EYCEGRDLDCKLEE   95 (260)
T ss_pred             EeCCCCCHHHHHHH
Confidence            99999999988763

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=98.82  E-value=1.6e-08  Score=92.73  Aligned_cols=91  Identities=25%  Similarity=0.416  Sum_probs=73.0

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCC--hhhHHHHHHHHHHHhcCCCCCccceeeEEEeCC------
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNT--TQWVDHFFNEVNLISGINHKNLVKLLGCSITGP------  338 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------  338 (363)
                      .++|...+.||+|+||.||++.. .+++.||||.+....  ......+.+|+.++++++||||+++++++....      
T Consensus        11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   90 (310)
T cd07865          11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY   90 (310)
T ss_pred             hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence            35688899999999999999996 458899999986432  222345678999999999999999999887654      


Q ss_pred             --eeEEEEEccCCCChhHHhhcC
Q 017984          339 --ESLLVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       339 --~~~lv~Ey~~~gsL~~~l~~~  359 (363)
                        ..++||||+++ +|.+++...
T Consensus        91 ~~~~~lv~e~~~~-~l~~~l~~~  112 (310)
T cd07865          91 KGSFYLVFEFCEH-DLAGLLSNK  112 (310)
T ss_pred             CceEEEEEcCCCc-CHHHHHHhc
Confidence              35999999965 888877654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=98.82  E-value=1.1e-08  Score=95.37  Aligned_cols=91  Identities=14%  Similarity=0.277  Sum_probs=74.9

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEe----CCee
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSIT----GPES  340 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~  340 (363)
                      .++|...+.||+|+||.||++.. .+|+.||+|++...  .......+.+|+.++..++||||+++++++..    ....
T Consensus         4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   83 (334)
T cd07855           4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV   83 (334)
T ss_pred             hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence            36788889999999999999996 46899999998753  22345678899999999999999999988753    3578


Q ss_pred             EEEEEccCCCChhHHhhcC
Q 017984          341 LLVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       341 ~lv~Ey~~~gsL~~~l~~~  359 (363)
                      ++||||+. |+|.+++...
T Consensus        84 ~lv~e~~~-~~l~~~~~~~  101 (334)
T cd07855          84 YVVMDLME-SDLHHIIHSD  101 (334)
T ss_pred             EEEEehhh-hhHHHHhccC
Confidence            99999996 5898888644

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=98.82  E-value=1.3e-08  Score=94.96  Aligned_cols=91  Identities=18%  Similarity=0.297  Sum_probs=74.4

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeC-----Ce
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITG-----PE  339 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~  339 (363)
                      .+.|...+.||+|+||.||++.. .+++.||||.+...  .......+.+|+.++..++|+||+++++++...     ..
T Consensus         4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~   83 (337)
T cd07858           4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND   83 (337)
T ss_pred             ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence            35688889999999999999986 56899999998743  233345678999999999999999999987654     35


Q ss_pred             eEEEEEccCCCChhHHhhcC
Q 017984          340 SLLVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       340 ~~lv~Ey~~~gsL~~~l~~~  359 (363)
                      .+|||||+. ++|.+++...
T Consensus        84 ~~lv~e~~~-~~L~~~~~~~  102 (337)
T cd07858          84 VYIVYELMD-TDLHQIIRSS  102 (337)
T ss_pred             EEEEEeCCC-CCHHHHHhcC
Confidence            899999996 6898888654

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=98.82  E-value=1.9e-08  Score=92.76  Aligned_cols=82  Identities=21%  Similarity=0.338  Sum_probs=66.4

Q ss_pred             cCceecccCceEEEEEEcC---CCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEe--CCeeEEEEEcc
Q 017984          273 ESNKLGQGGSGSVYKGTLP---GGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSIT--GPESLLVYEFV  347 (363)
Q Consensus       273 ~~~~lg~G~~g~Vy~~~~~---~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv~Ey~  347 (363)
                      ...+||+|+||.||++...   ++..+|+|.+....  ....+.+|+.++++++||||+++++++..  +...++||||+
T Consensus         5 ~g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~   82 (317)
T cd07867           5 EGCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYA   82 (317)
T ss_pred             eceEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeee
Confidence            3468999999999999864   35789999986532  23457899999999999999999998854  56789999999


Q ss_pred             CCCChhHHhh
Q 017984          348 PNQSLLDNLF  357 (363)
Q Consensus       348 ~~gsL~~~l~  357 (363)
                      ++ +|.+++.
T Consensus        83 ~~-~l~~~~~   91 (317)
T cd07867          83 EH-DLWHIIK   91 (317)
T ss_pred             CC-cHHHHHH
Confidence            75 7877764

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=98.81  E-value=1.5e-08  Score=95.25  Aligned_cols=90  Identities=22%  Similarity=0.328  Sum_probs=73.3

Q ss_pred             hccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeC------
Q 017984          267 ATNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITG------  337 (363)
Q Consensus       267 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------  337 (363)
                      ..++|...+.||+|+||.||++.. ..++.||+|++...  .......+.+|+.+++.++||||+++++++...      
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~   94 (355)
T cd07874          15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF   94 (355)
T ss_pred             hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence            457889999999999999999986 45889999999753  333456788999999999999999999987643      


Q ss_pred             CeeEEEEEccCCCChhHHhh
Q 017984          338 PESLLVYEFVPNQSLLDNLF  357 (363)
Q Consensus       338 ~~~~lv~Ey~~~gsL~~~l~  357 (363)
                      ...++||||+++ +|.+++.
T Consensus        95 ~~~~lv~e~~~~-~l~~~~~  113 (355)
T cd07874          95 QDVYLVMELMDA-NLCQVIQ  113 (355)
T ss_pred             ceeEEEhhhhcc-cHHHHHh
Confidence            357999999975 6766654

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.81  E-value=4.8e-10  Score=107.08  Aligned_cols=90  Identities=19%  Similarity=0.297  Sum_probs=78.0

Q ss_pred             ccCCCcCceecccCceEEEEEEcCC-CCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEc
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLPG-GEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~~-g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      .+.|.+...||.|+||.||+++.++ +...|-|.|...+....+.|+-||++|...+||+||+|++.|..++.+||+.||
T Consensus        31 ~d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEF  110 (1187)
T KOG0579|consen   31 RDHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEF  110 (1187)
T ss_pred             HHHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEee
Confidence            3445566789999999999999754 455678999887888889999999999999999999999999999999999999


Q ss_pred             cCCCChhHHhh
Q 017984          347 VPNQSLLDNLF  357 (363)
Q Consensus       347 ~~~gsL~~~l~  357 (363)
                      |.||-.+.++.
T Consensus       111 C~GGAVDaiml  121 (1187)
T KOG0579|consen  111 CGGGAVDAIML  121 (1187)
T ss_pred             cCCchHhHHHH
Confidence            99999887764

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=98.81  E-value=2e-08  Score=91.20  Aligned_cols=88  Identities=28%  Similarity=0.394  Sum_probs=68.4

Q ss_pred             CCcCceecccCceEEEEEEc-CCCCEEEEEEeccCC--hhhHHHHHHHHHHHhcC---CCCCccceeeEEEe-----CCe
Q 017984          271 FHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNT--TQWVDHFFNEVNLISGI---NHKNLVKLLGCSIT-----GPE  339 (363)
Q Consensus       271 ~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~-----~~~  339 (363)
                      |...+.||+|+||.||++.. .+++.||+|.++...  ......+.+|+.++..+   +||||+++++++..     ...
T Consensus         2 y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~   81 (288)
T cd07863           2 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETK   81 (288)
T ss_pred             ceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCce
Confidence            66778999999999999986 468899999987532  22233466777777665   79999999998764     345


Q ss_pred             eEEEEEccCCCChhHHhhcC
Q 017984          340 SLLVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       340 ~~lv~Ey~~~gsL~~~l~~~  359 (363)
                      .++||||+++ +|.+++...
T Consensus        82 ~~lv~e~~~~-~l~~~~~~~  100 (288)
T cd07863          82 VTLVFEHVDQ-DLRTYLDKV  100 (288)
T ss_pred             EEEEEccccc-CHHHHHHhc
Confidence            8999999985 898888653

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>PHA03207 serine/threonine kinase US3; Provisional

Probab=98.80  E-value=1.9e-08  Score=95.99  Aligned_cols=86  Identities=16%  Similarity=0.167  Sum_probs=72.2

Q ss_pred             ccCCCcCceecccCceEEEEEEcC---CCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLP---GGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVY  344 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~---~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  344 (363)
                      ...|...+.||+|+||.||++...   .+..|++|.+...     ..+.+|+.++.+++||||+++++++......++||
T Consensus        91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~  165 (392)
T PHA03207         91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVM  165 (392)
T ss_pred             cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEe
Confidence            346888999999999999999753   3578999988643     23568999999999999999999999999999999


Q ss_pred             EccCCCChhHHhhcC
Q 017984          345 EFVPNQSLLDNLFDK  359 (363)
Q Consensus       345 Ey~~~gsL~~~l~~~  359 (363)
                      |++. ++|.+++...
T Consensus       166 e~~~-~~l~~~l~~~  179 (392)
T PHA03207        166 PKYK-CDLFTYVDRS  179 (392)
T ss_pred             hhcC-CCHHHHHHhc
Confidence            9996 6898888543

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=98.79  E-value=3.2e-08  Score=89.69  Aligned_cols=85  Identities=22%  Similarity=0.159  Sum_probs=65.9

Q ss_pred             eecccCceEEEEEEc-CCCCEEEEEEeccCC---hhhHHHHHHHHH---HHhcCCCCCccceeeEEEeCCeeEEEEEccC
Q 017984          276 KLGQGGSGSVYKGTL-PGGEAVAVKRLFYNT---TQWVDHFFNEVN---LISGINHKNLVKLLGCSITGPESLLVYEFVP  348 (363)
Q Consensus       276 ~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~E~~---~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~~  348 (363)
                      .||+|+||.||++.. .+++.||+|.+....   ......+..|..   ++....||||+++++.+...+..++||||++
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN   80 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence            479999999999986 458899999986532   122223444443   4445689999999999999999999999999


Q ss_pred             CCChhHHhhcCC
Q 017984          349 NQSLLDNLFDKM  360 (363)
Q Consensus       349 ~gsL~~~l~~~~  360 (363)
                      +|+|.+++..+.
T Consensus        81 g~~L~~~l~~~~   92 (278)
T cd05606          81 GGDLHYHLSQHG   92 (278)
T ss_pred             CCcHHHHHHhcC
Confidence            999999886543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=98.79  E-value=1.4e-08  Score=94.36  Aligned_cols=89  Identities=19%  Similarity=0.284  Sum_probs=75.5

Q ss_pred             CCCcCceecccCceEEEEEEcC-CCCEEEEEEeccCC--hhhHHHHHHHHHHHhcCCCCCccceeeEEEeCC-----eeE
Q 017984          270 YFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYNT--TQWVDHFFNEVNLISGINHKNLVKLLGCSITGP-----ESL  341 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~  341 (363)
                      +|...+.||+|++|.||++... +++.+++|.+....  ....+.+.+|+.+++.++||||+++++++....     ..+
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY   80 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence            3677889999999999999974 48899999987542  344567999999999999999999999988765     789


Q ss_pred             EEEEccCCCChhHHhhcC
Q 017984          342 LVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       342 lv~Ey~~~gsL~~~l~~~  359 (363)
                      +||||+++ +|.+++.+.
T Consensus        81 lv~e~~~~-~l~~~l~~~   97 (330)
T cd07834          81 IVTELMET-DLHKVIKSP   97 (330)
T ss_pred             EEecchhh-hHHHHHhCC
Confidence            99999984 898888664

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=98.78  E-value=4.6e-08  Score=88.13  Aligned_cols=87  Identities=18%  Similarity=0.160  Sum_probs=66.0

Q ss_pred             ccCCCcCcee--cccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcC-CCCCccceeeEEEeCCeeEEE
Q 017984          268 TNYFHESNKL--GQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGI-NHKNLVKLLGCSITGPESLLV  343 (363)
Q Consensus       268 ~~~~~~~~~l--g~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv  343 (363)
                      .++|...+.+  |+|+||.||++.. .++..+|+|.+........     |+.....+ +||||+++++.+..++..++|
T Consensus        13 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv   87 (267)
T PHA03390         13 LKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSVTTLKGHVLI   87 (267)
T ss_pred             HHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEEecCCeeEEE
Confidence            3455555555  9999999999986 4578899999864321111     22222222 699999999999999999999


Q ss_pred             EEccCCCChhHHhhcC
Q 017984          344 YEFVPNQSLLDNLFDK  359 (363)
Q Consensus       344 ~Ey~~~gsL~~~l~~~  359 (363)
                      |||+++|+|.+++..+
T Consensus        88 ~e~~~~~~L~~~l~~~  103 (267)
T PHA03390         88 MDYIKDGDLFDLLKKE  103 (267)
T ss_pred             EEcCCCCcHHHHHHhc
Confidence            9999999999999765

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=98.78  E-value=3e-08  Score=93.09  Aligned_cols=91  Identities=23%  Similarity=0.341  Sum_probs=74.3

Q ss_pred             hccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeC------
Q 017984          267 ATNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITG------  337 (363)
Q Consensus       267 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------  337 (363)
                      ..+.|...+.||+|+||.||++.. .+++.||+|.+...  .......+.+|+.++.+++||||+++++++...      
T Consensus        14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   93 (353)
T cd07850          14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF   93 (353)
T ss_pred             hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence            456788999999999999999986 46899999998642  333455688999999999999999999987643      


Q ss_pred             CeeEEEEEccCCCChhHHhhc
Q 017984          338 PESLLVYEFVPNQSLLDNLFD  358 (363)
Q Consensus       338 ~~~~lv~Ey~~~gsL~~~l~~  358 (363)
                      ...++||||+++ +|.+++..
T Consensus        94 ~~~~lv~e~~~~-~l~~~~~~  113 (353)
T cd07850          94 QDVYLVMELMDA-NLCQVIQM  113 (353)
T ss_pred             CcEEEEEeccCC-CHHHHHhh
Confidence            357999999964 88887653

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=98.78  E-value=7e-10  Score=106.51  Aligned_cols=92  Identities=22%  Similarity=0.331  Sum_probs=82.2

Q ss_pred             HhccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEE
Q 017984          266 KATNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVY  344 (363)
Q Consensus       266 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  344 (363)
                      .+.++|.....+|.|.+|.|||++. +.++..|+|+++............|+-+++..+|||||.++|.+...+.+|+.|
T Consensus        12 nP~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicM   91 (829)
T KOG0576|consen   12 NPQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICM   91 (829)
T ss_pred             CCccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEE
Confidence            4567888999999999999999996 568999999998776666677889999999999999999999999999999999


Q ss_pred             EccCCCChhHHhh
Q 017984          345 EFVPNQSLLDNLF  357 (363)
Q Consensus       345 Ey~~~gsL~~~l~  357 (363)
                      ||+.+|+|.+.-+
T Consensus        92 EycgggslQdiy~  104 (829)
T KOG0576|consen   92 EYCGGGSLQDIYH  104 (829)
T ss_pred             EecCCCcccceee
Confidence            9999999987544

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=98.77  E-value=1.2e-08  Score=92.18  Aligned_cols=88  Identities=31%  Similarity=0.469  Sum_probs=75.2

Q ss_pred             CCcCceecccCceEEEEEEcC-CCCEEEEEEeccCC--hhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEcc
Q 017984          271 FHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYNT--TQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFV  347 (363)
Q Consensus       271 ~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~  347 (363)
                      |...+.||+|++|.||++... +++.+++|.+....  ....+.+.+|+.++++++|+||+++++++...+..++||||+
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~   80 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC   80 (282)
T ss_pred             CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence            345678999999999999974 58999999997642  333466889999999999999999999999999999999999


Q ss_pred             CCCChhHHhhcC
Q 017984          348 PNQSLLDNLFDK  359 (363)
Q Consensus       348 ~~gsL~~~l~~~  359 (363)
                      + ++|.+++...
T Consensus        81 ~-~~l~~~i~~~   91 (282)
T cd07829          81 D-MDLKKYLDKR   91 (282)
T ss_pred             C-cCHHHHHHhh
Confidence            8 5999998765

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=98.74  E-value=3.3e-08  Score=89.90  Aligned_cols=84  Identities=20%  Similarity=0.321  Sum_probs=69.3

Q ss_pred             CCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC-ChhhHHHHHHHHHHHhcCC-CCCccceeeEEEeCCeeEEEEEc
Q 017984          270 YFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN-TTQWVDHFFNEVNLISGIN-HKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      +|...+.||+|+||.||++.. .+++.+|+|.+... .......+.+|+.++.++. |+||+++++++..+...+++|||
T Consensus         5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~   84 (288)
T cd06616           5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL   84 (288)
T ss_pred             HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence            345567899999999999986 45889999998754 2344567899999999996 99999999999999999999999


Q ss_pred             cCCCChhH
Q 017984          347 VPNQSLLD  354 (363)
Q Consensus       347 ~~~gsL~~  354 (363)
                      ++. +|.+
T Consensus        85 ~~~-~l~~   91 (288)
T cd06616          85 MDI-SLDK   91 (288)
T ss_pred             ccC-CHHH
Confidence            864 5544

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=98.74  E-value=3.1e-08  Score=89.62  Aligned_cols=88  Identities=30%  Similarity=0.486  Sum_probs=74.6

Q ss_pred             CCcCceecccCceEEEEEEcC-CCCEEEEEEeccCCh--hhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEcc
Q 017984          271 FHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYNTT--QWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFV  347 (363)
Q Consensus       271 ~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~  347 (363)
                      |...+.||+|++|.||++... +++.+++|++.....  .....+.+|+.++++++|+||+++++.+..+...++|+||+
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   80 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM   80 (283)
T ss_pred             CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence            345678999999999999974 688999999875422  34567889999999999999999999999999999999999


Q ss_pred             CCCChhHHhhcC
Q 017984          348 PNQSLLDNLFDK  359 (363)
Q Consensus       348 ~~gsL~~~l~~~  359 (363)
                      ++ +|.+++..+
T Consensus        81 ~~-~l~~~l~~~   91 (283)
T cd05118          81 DT-DLYKLIKDR   91 (283)
T ss_pred             CC-CHHHHHHhh
Confidence            75 888887664

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=98.73  E-value=2.6e-08  Score=85.04  Aligned_cols=80  Identities=18%  Similarity=0.179  Sum_probs=57.8

Q ss_pred             CceecccCceEEEEEEcCCCCEEEEEEeccCCh--hh-------HHHH-----------------HHHHHHHhcCCCCCc
Q 017984          274 SNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTT--QW-------VDHF-----------------FNEVNLISGINHKNL  327 (363)
Q Consensus       274 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~--~~-------~~~~-----------------~~E~~~l~~l~h~ni  327 (363)
                      ...||+|+||.||++..++|+.||||+++....  ..       ...|                 .+|++.+.++.|+++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v   81 (190)
T cd05147           2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI   81 (190)
T ss_pred             CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence            457999999999999988899999999975311  00       1122                 359999999988877


Q ss_pred             cceeeEEEeCCeeEEEEEccCCCChhHH
Q 017984          328 VKLLGCSITGPESLLVYEFVPNQSLLDN  355 (363)
Q Consensus       328 v~l~~~~~~~~~~~lv~Ey~~~gsL~~~  355 (363)
                      ........  ...+|||||+++++|...
T Consensus        82 ~~p~~~~~--~~~~iVmE~i~g~~l~~~  107 (190)
T cd05147          82 PCPEPILL--KSHVLVMEFIGDDGWAAP  107 (190)
T ss_pred             CCCcEEEe--cCCEEEEEEeCCCCCcch
Confidence            54333222  233899999999877654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=98.73  E-value=2.5e-08  Score=93.27  Aligned_cols=93  Identities=19%  Similarity=0.318  Sum_probs=76.3

Q ss_pred             hccCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCe----
Q 017984          267 ATNYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPE----  339 (363)
Q Consensus       267 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----  339 (363)
                      ..++|.....||+|++|.||++... +++.||+|++...  .......+.+|+.++++++||||+++++++...+.    
T Consensus        13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   92 (343)
T cd07851          13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF   92 (343)
T ss_pred             ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence            4567888999999999999999974 5789999998643  23334568899999999999999999998776554    


Q ss_pred             --eEEEEEccCCCChhHHhhcCC
Q 017984          340 --SLLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       340 --~~lv~Ey~~~gsL~~~l~~~~  360 (363)
                        .++|+||+ +++|.+++...+
T Consensus        93 ~~~~lv~e~~-~~~L~~~~~~~~  114 (343)
T cd07851          93 QDVYLVTHLM-GADLNNIVKCQK  114 (343)
T ss_pred             ccEEEEEecC-CCCHHHHHhcCC
Confidence              89999999 569999887644

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=98.72  E-value=3.1e-09  Score=93.70  Aligned_cols=91  Identities=18%  Similarity=0.296  Sum_probs=73.7

Q ss_pred             cCCCcCceecccCceEEEEEEcC---C--CCEEEEEEeccCCh--hhHHHHHHHHHHHhcCCCCCccceeeEEEe-CCee
Q 017984          269 NYFHESNKLGQGGSGSVYKGTLP---G--GEAVAVKRLFYNTT--QWVDHFFNEVNLISGINHKNLVKLLGCSIT-GPES  340 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~~---~--g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~  340 (363)
                      ..|.....||+|.||.||++.-.   +  ...+|+|.++....  .......+|+.+++.++||||+.|..++.. +..+
T Consensus        24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v  103 (438)
T KOG0666|consen   24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKV  103 (438)
T ss_pred             HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceE
Confidence            34677889999999999999642   2  23789999975422  223457899999999999999999999887 7889


Q ss_pred             EEEEEccCCCChhHHhhcCC
Q 017984          341 LLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       341 ~lv~Ey~~~gsL~~~l~~~~  360 (363)
                      +|++||.++ ||.++|+-++
T Consensus       104 ~l~fdYAEh-DL~~II~fHr  122 (438)
T KOG0666|consen  104 WLLFDYAEH-DLWHIIKFHR  122 (438)
T ss_pred             EEEehhhhh-hHHHHHHHhc
Confidence            999999987 9999987554

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=98.72  E-value=5.1e-08  Score=89.13  Aligned_cols=89  Identities=21%  Similarity=0.324  Sum_probs=72.6

Q ss_pred             ccCCCcCceecccCceEEEEEEcCC-CCEEEEEEeccC-ChhhHHHHHHHHHHHhcCC-CCCccceeeEEEeCCeeEEEE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLPG-GEAVAVKRLFYN-TTQWVDHFFNEVNLISGIN-HKNLVKLLGCSITGPESLLVY  344 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~~-g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~  344 (363)
                      .++|...+.||+|++|.||++...+ ++.||||.++.. ......++..|+.++.+.. ||||+++++++......+++|
T Consensus        14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~   93 (296)
T cd06618          14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICM   93 (296)
T ss_pred             cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEe
Confidence            3567788899999999999999754 889999999754 2334556778888777775 999999999999999999999


Q ss_pred             EccCCCChhHHhh
Q 017984          345 EFVPNQSLLDNLF  357 (363)
Q Consensus       345 Ey~~~gsL~~~l~  357 (363)
                      ||+++ +|.+++.
T Consensus        94 e~~~~-~l~~l~~  105 (296)
T cd06618          94 ELMST-CLDKLLK  105 (296)
T ss_pred             eccCc-CHHHHHH
Confidence            99864 6666554

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=98.72  E-value=2.7e-09  Score=98.10  Aligned_cols=95  Identities=24%  Similarity=0.243  Sum_probs=76.1

Q ss_pred             hccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC---Chh----hHHHHHHHHHHHhcCCCCCccceeeEEE-eC
Q 017984          267 ATNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN---TTQ----WVDHFFNEVNLISGINHKNLVKLLGCSI-TG  337 (363)
Q Consensus       267 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~----~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~  337 (363)
                      ..+.|-..++||+|+|+.|||+.. ...+.||+|+-..+   ..+    ..+...+|.++...|+||.||++++++. +.
T Consensus       461 Ln~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDt  540 (775)
T KOG1151|consen  461 LNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDT  540 (775)
T ss_pred             hHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecc
Confidence            345677788999999999999984 45678999976532   111    1234678999999999999999999886 45


Q ss_pred             CeeEEEEEccCCCChhHHhhcCCC
Q 017984          338 PESLLVYEFVPNQSLLDNLFDKML  361 (363)
Q Consensus       338 ~~~~lv~Ey~~~gsL~~~l~~~~~  361 (363)
                      +..+-|+|||+|.+|+.||..++.
T Consensus       541 dsFCTVLEYceGNDLDFYLKQhkl  564 (775)
T KOG1151|consen  541 DSFCTVLEYCEGNDLDFYLKQHKL  564 (775)
T ss_pred             ccceeeeeecCCCchhHHHHhhhh
Confidence            678899999999999999987764

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=98.72  E-value=4.8e-08  Score=91.36  Aligned_cols=88  Identities=23%  Similarity=0.408  Sum_probs=71.5

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeC------C
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITG------P  338 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~  338 (363)
                      .++|...+.||+|+||.||++.. .+|+.||+|++...  .......+.+|+.++..++||||+++++++...      .
T Consensus        14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~   93 (342)
T cd07879          14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ   93 (342)
T ss_pred             ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence            36788889999999999999996 46899999998643  222345688999999999999999999988754      3


Q ss_pred             eeEEEEEccCCCChhHHh
Q 017984          339 ESLLVYEFVPNQSLLDNL  356 (363)
Q Consensus       339 ~~~lv~Ey~~~gsL~~~l  356 (363)
                      ..++|+||+.. +|.+++
T Consensus        94 ~~~lv~e~~~~-~l~~~~  110 (342)
T cd07879          94 DFYLVMPYMQT-DLQKIM  110 (342)
T ss_pred             eEEEEeccccc-CHHHHH
Confidence            56999999964 777654

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=98.71  E-value=1e-07  Score=81.44  Aligned_cols=83  Identities=31%  Similarity=0.499  Sum_probs=73.0

Q ss_pred             ecccCceEEEEEEcCC-CCEEEEEEeccCChh-hHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEccCCCChhH
Q 017984          277 LGQGGSGSVYKGTLPG-GEAVAVKRLFYNTTQ-WVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQSLLD  354 (363)
Q Consensus       277 lg~G~~g~Vy~~~~~~-g~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~~~gsL~~  354 (363)
                      ||+|.+|.||++...+ ++.+++|++...... ..+.+.+|+..+..++|++|+++++++......++++||+++++|.+
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~   80 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD   80 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence            6899999999999754 889999999765332 35679999999999999999999999999899999999999999999


Q ss_pred             HhhcC
Q 017984          355 NLFDK  359 (363)
Q Consensus       355 ~l~~~  359 (363)
                      ++...
T Consensus        81 ~~~~~   85 (215)
T cd00180          81 LLKEN   85 (215)
T ss_pred             HHHhc
Confidence            98764

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=98.71  E-value=5.9e-08  Score=87.95  Aligned_cols=87  Identities=28%  Similarity=0.390  Sum_probs=69.9

Q ss_pred             CCcCceecccCceEEEEEEcC-CCCEEEEEEeccC--ChhhHHHHHHHHHHHhcC---CCCCccceeeEEEeCCe-----
Q 017984          271 FHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYN--TTQWVDHFFNEVNLISGI---NHKNLVKLLGCSITGPE-----  339 (363)
Q Consensus       271 ~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~-----  339 (363)
                      |+..+.||+|+||.||++... +++.+|+|++...  .......+.+|+.++.++   +||||+++++++...+.     
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~   80 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK   80 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence            456788999999999999975 4899999999743  222234577888777665   69999999999988776     


Q ss_pred             eEEEEEccCCCChhHHhhc
Q 017984          340 SLLVYEFVPNQSLLDNLFD  358 (363)
Q Consensus       340 ~~lv~Ey~~~gsL~~~l~~  358 (363)
                      .+++|||+++ +|.+++..
T Consensus        81 ~~l~~e~~~~-~l~~~l~~   98 (287)
T cd07838          81 LTLVFEHVDQ-DLATYLSK   98 (287)
T ss_pred             eEEEehhccc-CHHHHHHH
Confidence            9999999975 89888865

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=98.70  E-value=2.2e-09  Score=109.99  Aligned_cols=97  Identities=26%  Similarity=0.384  Sum_probs=82.7

Q ss_pred             HHHhccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCee
Q 017984          264 LEKATNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPES  340 (363)
Q Consensus       264 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  340 (363)
                      +...+-+++....||.|.||.||.+.. .+|...|+|.+...  .......+.+|+.++..|+|||+|+.+|+-..++.+
T Consensus      1230 lsnV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv 1309 (1509)
T KOG4645|consen 1230 LSNVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKV 1309 (1509)
T ss_pred             hccceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHH
Confidence            344566788899999999999999994 66999999998754  233345688999999999999999999999999999


Q ss_pred             EEEEEccCCCChhHHhhcCC
Q 017984          341 LLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       341 ~lv~Ey~~~gsL~~~l~~~~  360 (363)
                      +|.||||++|+|.+.+...+
T Consensus      1310 ~IFMEyC~~GsLa~ll~~gr 1329 (1509)
T KOG4645|consen 1310 YIFMEYCEGGSLASLLEHGR 1329 (1509)
T ss_pred             HHHHHHhccCcHHHHHHhcc
Confidence            99999999999999887543

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=98.70  E-value=4.1e-08  Score=90.11  Aligned_cols=90  Identities=23%  Similarity=0.429  Sum_probs=72.0

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCC--hhhHHHHHHHHHHHhcCCCCCccceeeEEEeCC------
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNT--TQWVDHFFNEVNLISGINHKNLVKLLGCSITGP------  338 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------  338 (363)
                      .++|...+.||+|+||.||++.. .+++.+++|++....  ......+.+|++++..++||||+++++.+....      
T Consensus         7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   86 (311)
T cd07866           7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK   86 (311)
T ss_pred             cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence            46788999999999999999996 458899999986432  222345789999999999999999998875433      


Q ss_pred             --eeEEEEEccCCCChhHHhhc
Q 017984          339 --ESLLVYEFVPNQSLLDNLFD  358 (363)
Q Consensus       339 --~~~lv~Ey~~~gsL~~~l~~  358 (363)
                        .+++|+||+.+ +|...+..
T Consensus        87 ~~~~~lv~~~~~~-~l~~~~~~  107 (311)
T cd07866          87 RGSVYMVTPYMDH-DLSGLLEN  107 (311)
T ss_pred             CceEEEEEecCCc-CHHHHHhc
Confidence              46999999975 77777654

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.69  E-value=6.4e-09  Score=92.57  Aligned_cols=97  Identities=21%  Similarity=0.224  Sum_probs=81.8

Q ss_pred             hccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC---ChhhHHHHHHHHHHHhcC-CCCCccceeeEEEeCCeeE
Q 017984          267 ATNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN---TTQWVDHFFNEVNLISGI-NHKNLVKLLGCSITGPESL  341 (363)
Q Consensus       267 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~  341 (363)
                      ..++|.+..+||+|+|..|..+.+ ++.+.+|+|++++.   +.+.......|-.+.... +||.+|.|+.++.++..++
T Consensus       248 ~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlf  327 (593)
T KOG0695|consen  248 GLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLF  327 (593)
T ss_pred             ccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEE
Confidence            346788999999999999999987 45789999999753   445555667788888776 6999999999999999999


Q ss_pred             EEEEccCCCChhHHhhcCCCCC
Q 017984          342 LVYEFVPNQSLLDNLFDKMLSP  363 (363)
Q Consensus       342 lv~Ey~~~gsL~~~l~~~~~~~  363 (363)
                      +|.||++||+|..++.+++..|
T Consensus       328 fvieyv~ggdlmfhmqrqrklp  349 (593)
T KOG0695|consen  328 FVIEYVNGGDLMFHMQRQRKLP  349 (593)
T ss_pred             EEEEEecCcceeeehhhhhcCc
Confidence            9999999999999998776654

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=98.68  E-value=1.1e-08  Score=98.09  Aligned_cols=92  Identities=17%  Similarity=0.222  Sum_probs=78.0

Q ss_pred             cCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCCh---hhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTT---QWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVY  344 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  344 (363)
                      .-|...+.||-|+||+|..+.- ++...+|+|.|++.+-   ........|-.||...++++||+|+-.|.+.+.+|+||
T Consensus       629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVM  708 (1034)
T KOG0608|consen  629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM  708 (1034)
T ss_pred             cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEE
Confidence            3477788999999999998874 5567899999986532   33455789999999999999999999999999999999


Q ss_pred             EccCCCChhHHhhcCC
Q 017984          345 EFVPNQSLLDNLFDKM  360 (363)
Q Consensus       345 Ey~~~gsL~~~l~~~~  360 (363)
                      ||++|||+..+|.+..
T Consensus       709 dYIPGGDmMSLLIrmg  724 (1034)
T KOG0608|consen  709 DYIPGGDMMSLLIRMG  724 (1034)
T ss_pred             eccCCccHHHHHHHhc
Confidence            9999999999886543

>PTZ00284 protein kinase; Provisional

Probab=98.66  E-value=7.6e-08  Score=94.00  Aligned_cols=95  Identities=19%  Similarity=0.179  Sum_probs=71.7

Q ss_pred             HHHHhccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCC------CCccceeeEEE
Q 017984          263 TLEKATNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINH------KNLVKLLGCSI  335 (363)
Q Consensus       263 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h------~niv~l~~~~~  335 (363)
                      ++...+++|...++||+|+||.||++.. ..++.||||+++... ....++..|+.++..++|      .+|+++++++.
T Consensus       123 ~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~  201 (467)
T PTZ00284        123 DIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQ  201 (467)
T ss_pred             ccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEE
Confidence            3444568899999999999999999986 457899999996432 223445667777766654      45888888877


Q ss_pred             eC-CeeEEEEEccCCCChhHHhhcC
Q 017984          336 TG-PESLLVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       336 ~~-~~~~lv~Ey~~~gsL~~~l~~~  359 (363)
                      .. ...+||||++ +++|.++|.++
T Consensus       202 ~~~~~~~iv~~~~-g~~l~~~l~~~  225 (467)
T PTZ00284        202 NETGHMCIVMPKY-GPCLLDWIMKH  225 (467)
T ss_pred             cCCceEEEEEecc-CCCHHHHHHHc
Confidence            54 5789999988 67898888654

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=98.64  E-value=8e-08  Score=83.65  Aligned_cols=89  Identities=9%  Similarity=0.049  Sum_probs=71.2

Q ss_pred             hccCCCcCceecccCceEEEEEEcCCCCEEEEEEeccCCh---hhHHH------HHHHHHHHhcCCCCCccceeeEEEeC
Q 017984          267 ATNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTT---QWVDH------FFNEVNLISGINHKNLVKLLGCSITG  337 (363)
Q Consensus       267 ~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~---~~~~~------~~~E~~~l~~l~h~niv~l~~~~~~~  337 (363)
                      ..++|...+++|+|+||.||.... ++..+|+|.+.....   .....      |.+|+..+.++.|++|..+..++...
T Consensus        29 l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~  107 (232)
T PRK10359         29 LSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA  107 (232)
T ss_pred             hhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence            467899999999999999998655 567899999975322   22222      68999999999999999998886643


Q ss_pred             --------CeeEEEEEccCCCChhHHh
Q 017984          338 --------PESLLVYEFVPNQSLLDNL  356 (363)
Q Consensus       338 --------~~~~lv~Ey~~~gsL~~~l  356 (363)
                              ...+|||||++|.+|.++.
T Consensus       108 ~~~~~~~~~~~~lvmEyi~G~tL~~~~  134 (232)
T PRK10359        108 ERKTLRYAHTYIMLIEYIEGVELNDMP  134 (232)
T ss_pred             ccccccccCCeEEEEEEECCccHHHhh
Confidence                    3588999999999997763

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=98.62  E-value=1.4e-07  Score=82.75  Aligned_cols=80  Identities=23%  Similarity=0.328  Sum_probs=69.8

Q ss_pred             CceEEEEEEcC-CCCEEEEEEeccCChhh-HHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEccCCCChhHHhhc
Q 017984          281 GSGSVYKGTLP-GGEAVAVKRLFYNTTQW-VDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQSLLDNLFD  358 (363)
Q Consensus       281 ~~g~Vy~~~~~-~g~~vavK~l~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~~~gsL~~~l~~  358 (363)
                      +||.||++... +++.+++|++....... .+.+.+|++.+++++|+||+++++.+......++++||+++++|.+++..
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~   80 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK   80 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence            58999999975 48999999997654333 67899999999999999999999999999999999999999999999875


Q ss_pred             CC
Q 017984          359 KM  360 (363)
Q Consensus       359 ~~  360 (363)
                      ..
T Consensus        81 ~~   82 (244)
T smart00220       81 RG   82 (244)
T ss_pred             cc
Confidence            43

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>PRK14879 serine/threonine protein kinase; Provisional

Probab=98.62  E-value=1.3e-07  Score=81.90  Aligned_cols=83  Identities=13%  Similarity=0.172  Sum_probs=67.9

Q ss_pred             ceecccCceEEEEEEcCCCCEEEEEEeccCCh--------hhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEc
Q 017984          275 NKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTT--------QWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       275 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      +.||+|++|.||++.. +|..+++|+......        .....+.+|+.++..+.|++|.....++......++||||
T Consensus         2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~   80 (211)
T PRK14879          2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY   80 (211)
T ss_pred             cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence            5789999999999987 577899998654211        1124588999999999999998888777777888999999


Q ss_pred             cCCCChhHHhhc
Q 017984          347 VPNQSLLDNLFD  358 (363)
Q Consensus       347 ~~~gsL~~~l~~  358 (363)
                      ++|++|.+++..
T Consensus        81 ~~G~~L~~~~~~   92 (211)
T PRK14879         81 IEGEPLKDLINS   92 (211)
T ss_pred             eCCcCHHHHHHh
Confidence            999999988754

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=98.61  E-value=3.5e-08  Score=89.69  Aligned_cols=97  Identities=25%  Similarity=0.305  Sum_probs=79.6

Q ss_pred             hHHHHHhccCCCcCceecccCceEEEEEEcCC------CCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeE
Q 017984          261 YETLEKATNYFHESNKLGQGGSGSVYKGTLPG------GEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGC  333 (363)
Q Consensus       261 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~------g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~  333 (363)
                      ..++.....++....++-+|.||+||+|.+.+      .+.|-+|.++.+ +.-....|+.|..++..+.|||+.++.++
T Consensus       276 ~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V  355 (563)
T KOG1024|consen  276 LQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGV  355 (563)
T ss_pred             HHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEE
Confidence            34555666778888899999999999997643      346778888754 44456779999999999999999999998


Q ss_pred             EEe-CCeeEEEEEccCCCChhHHhh
Q 017984          334 SIT-GPESLLVYEFVPNQSLLDNLF  357 (363)
Q Consensus       334 ~~~-~~~~~lv~Ey~~~gsL~~~l~  357 (363)
                      +.+ ....+++|.++.-|+|..+|.
T Consensus       356 ~ie~~~~P~V~y~~~~~gNLK~FL~  380 (563)
T KOG1024|consen  356 SIEDYATPFVLYPATGVGNLKSFLQ  380 (563)
T ss_pred             EeeccCcceEEEeccCcchHHHHHH
Confidence            876 457899999999999999997

>PHA03210 serine/threonine kinase US3; Provisional

Probab=98.61  E-value=6.5e-08  Score=95.19  Aligned_cols=91  Identities=18%  Similarity=0.241  Sum_probs=68.0

Q ss_pred             ccCCCcCceecccCceEEEEEEcCC--CCEEEEEEe--------------c---cCChhhHHHHHHHHHHHhcCCCCCcc
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLPG--GEAVAVKRL--------------F---YNTTQWVDHFFNEVNLISGINHKNLV  328 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~~--g~~vavK~l--------------~---~~~~~~~~~~~~E~~~l~~l~h~niv  328 (363)
                      .++|...+.||+|+||.||++.++.  +...++|.+              .   .........|.+|+.+|.+++||||+
T Consensus       147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv  226 (501)
T PHA03210        147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENIL  226 (501)
T ss_pred             hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcC
Confidence            4678999999999999999987532  222222211              0   01222345689999999999999999


Q ss_pred             ceeeEEEeCCeeEEEEEccCCCChhHHhhcC
Q 017984          329 KLLGCSITGPESLLVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       329 ~l~~~~~~~~~~~lv~Ey~~~gsL~~~l~~~  359 (363)
                      ++++++...+..++|+|++. ++|.+++.+.
T Consensus       227 ~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~  256 (501)
T PHA03210        227 KIEEILRSEANTYMITQKYD-FDLYSFMYDE  256 (501)
T ss_pred             cEeEEEEECCeeEEEEeccc-cCHHHHHhhc
Confidence            99999999999999999985 5787777543

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=98.61  E-value=4.2e-08  Score=93.20  Aligned_cols=92  Identities=23%  Similarity=0.318  Sum_probs=74.5

Q ss_pred             cCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccCCh---hh-----HHHHHHHHHHHhcCC---CCCccceeeEEEe
Q 017984          269 NYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYNTT---QW-----VDHFFNEVNLISGIN---HKNLVKLLGCSIT  336 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~---~~-----~~~~~~E~~~l~~l~---h~niv~l~~~~~~  336 (363)
                      .+|...+.+|+|+||.|+.+.++ +..+|+||.|.+..-   .+     ....-.||.+|..++   |+||++++.+|++
T Consensus       561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd  640 (772)
T KOG1152|consen  561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED  640 (772)
T ss_pred             ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence            34777889999999999999975 466899999865311   11     123568999999997   9999999999999


Q ss_pred             CCeeEEEEEcc-CCCChhHHhhcCC
Q 017984          337 GPESLLVYEFV-PNQSLLDNLFDKM  360 (363)
Q Consensus       337 ~~~~~lv~Ey~-~~gsL~~~l~~~~  360 (363)
                      ++..||+||-. ++-+|+++|.-++
T Consensus       641 dd~yyl~te~hg~gIDLFd~IE~kp  665 (772)
T KOG1152|consen  641 DDYYYLETEVHGEGIDLFDFIEFKP  665 (772)
T ss_pred             CCeeEEEecCCCCCcchhhhhhccC
Confidence            99999999964 6789999997554

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=98.61  E-value=4.5e-08  Score=92.57  Aligned_cols=90  Identities=23%  Similarity=0.334  Sum_probs=78.5

Q ss_pred             CCCcCceecccCceEEEEEEcCCCCEEEEEEecc--CChhhHHHHHHHHHHHhcCC-CCCccceeeEEEeCCeeEEEEEc
Q 017984          270 YFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFY--NTTQWVDHFFNEVNLISGIN-HKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~--~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      .|...+.||+||.+.||++...+.+.+|+|++..  .+.+....|.+|+.+|.+|+ |.+||+|+++-..++.+||||||
T Consensus       362 ~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE~  441 (677)
T KOG0596|consen  362 EYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVMEC  441 (677)
T ss_pred             hhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEeec
Confidence            3667788999999999999988888889887753  46777889999999999995 99999999999999999999998


Q ss_pred             cCCCChhHHhhcCC
Q 017984          347 VPNQSLLDNLFDKM  360 (363)
Q Consensus       347 ~~~gsL~~~l~~~~  360 (363)
                      =+. ||..+|....
T Consensus       442 Gd~-DL~kiL~k~~  454 (677)
T KOG0596|consen  442 GDI-DLNKILKKKK  454 (677)
T ss_pred             ccc-cHHHHHHhcc
Confidence            754 9999987654

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=98.60  E-value=1.4e-08  Score=103.69  Aligned_cols=80  Identities=30%  Similarity=0.451  Sum_probs=64.4

Q ss_pred             HhccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEE
Q 017984          266 KATNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLV  343 (363)
Q Consensus       266 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  343 (363)
                      +-..+|....+||+||||.|||++. -||+.+|||+|... +...-....+|+.++++|+|||||+++..|.+.....-+
T Consensus       476 RY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~  555 (1351)
T KOG1035|consen  476 RYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTV  555 (1351)
T ss_pred             hHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccc
Confidence            3456688889999999999999995 37999999999865 334455689999999999999999999988775544444


Q ss_pred             EE
Q 017984          344 YE  345 (363)
Q Consensus       344 ~E  345 (363)
                      +|
T Consensus       556 ~e  557 (1351)
T KOG1035|consen  556 LE  557 (1351)
T ss_pred             cc
Confidence            44

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=98.58  E-value=3.1e-07  Score=85.50  Aligned_cols=89  Identities=24%  Similarity=0.276  Sum_probs=69.9

Q ss_pred             CCCcCceecccCceEEEEEEcC-C--CCEEEEEEeccC--ChhhHHHHHHHHHHHhcC-CCCCccceeeEEEeC----Ce
Q 017984          270 YFHESNKLGQGGSGSVYKGTLP-G--GEAVAVKRLFYN--TTQWVDHFFNEVNLISGI-NHKNLVKLLGCSITG----PE  339 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~~~-~--g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~----~~  339 (363)
                      +|...+.||+|+||.||++... +  +..+|+|++...  .....+.+.+|+.++.++ +||||+++++.....    ..
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~   80 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE   80 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence            3667789999999999999963 3  778999998642  223355688999999999 599999999875432    45


Q ss_pred             eEEEEEccCCCChhHHhhcC
Q 017984          340 SLLVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       340 ~~lv~Ey~~~gsL~~~l~~~  359 (363)
                      .++++||+. ++|.+++...
T Consensus        81 ~~~~~e~~~-~~L~~~l~~~   99 (332)
T cd07857          81 LYLYEELME-ADLHQIIRSG   99 (332)
T ss_pred             EEEEEeccc-CCHHHHHhcC
Confidence            789999986 5899888654

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=98.56  E-value=3.2e-07  Score=78.31  Aligned_cols=79  Identities=18%  Similarity=0.183  Sum_probs=59.0

Q ss_pred             CceecccCceEEEEEEcCCCCEEEEEEeccCChh--------------------------hHHHHHHHHHHHhcCCCCCc
Q 017984          274 SNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQ--------------------------WVDHFFNEVNLISGINHKNL  327 (363)
Q Consensus       274 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~--------------------------~~~~~~~E~~~l~~l~h~ni  327 (363)
                      ...||+|++|.||++...+|+.||||+++.....                          ....+.+|.+.+.++.|+++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i   81 (190)
T cd05145           2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV   81 (190)
T ss_pred             CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            4589999999999999878999999999754210                          01234689999999999988


Q ss_pred             cceeeEEEeCCeeEEEEEccCCCChhH
Q 017984          328 VKLLGCSITGPESLLVYEFVPNQSLLD  354 (363)
Q Consensus       328 v~l~~~~~~~~~~~lv~Ey~~~gsL~~  354 (363)
                      .....+...  ..+|||||++++++..
T Consensus        82 ~~p~~~~~~--~~~lVmE~~~g~~~~~  106 (190)
T cd05145          82 PVPEPILLK--KNVLVMEFIGDDGSPA  106 (190)
T ss_pred             CCceEEEec--CCEEEEEEecCCCchh
Confidence            655444333  2489999999886543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=98.55  E-value=2.5e-08  Score=92.20  Aligned_cols=103  Identities=21%  Similarity=0.245  Sum_probs=84.1

Q ss_pred             cchHHHHHhc-cCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeE
Q 017984          259 FSYETLEKAT-NYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGC  333 (363)
Q Consensus       259 ~~~~~~~~~~-~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~  333 (363)
                      +..-+++..+ +.|..-.+||+|+||.||-++. .+|+.+|.|.+.+.   .++...--++|-.+|.+++.+.||.|-..
T Consensus       174 WK~lE~qpvt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYA  253 (591)
T KOG0986|consen  174 WKWLELQPVTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYA  253 (591)
T ss_pred             HHHHHhhhccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeee
Confidence            3333444444 4577888999999999999986 45999999988643   23334457899999999999999999999


Q ss_pred             EEeCCeeEEEEEccCCCChhHHhhcCCC
Q 017984          334 SITGPESLLVYEFVPNQSLLDNLFDKML  361 (363)
Q Consensus       334 ~~~~~~~~lv~Ey~~~gsL~~~l~~~~~  361 (363)
                      +++.+.++||+..|+||||.-+|.+...
T Consensus       254 feTkd~LClVLtlMNGGDLkfHiyn~g~  281 (591)
T KOG0986|consen  254 FETKDALCLVLTLMNGGDLKFHIYNHGN  281 (591)
T ss_pred             ecCCCceEEEEEeecCCceeEEeeccCC
Confidence            9999999999999999999999987654

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=98.53  E-value=3.7e-07  Score=90.58  Aligned_cols=89  Identities=17%  Similarity=0.209  Sum_probs=67.9

Q ss_pred             ccCCCcCceecccCceEEEEEEcCCCCEEEEEEe-ccC-------ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCe
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRL-FYN-------TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPE  339 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l-~~~-------~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  339 (363)
                      ...|...+.||+|+||.||++.+.+.. +++|+. ...       .....+++.+|++++..++|++++....+......
T Consensus       332 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~  410 (535)
T PRK09605        332 KRRKIPDHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEE  410 (535)
T ss_pred             ccccCccceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCC
Confidence            344567889999999999999875443 444432 211       11223568999999999999999988877777778


Q ss_pred             eEEEEEccCCCChhHHhh
Q 017984          340 SLLVYEFVPNQSLLDNLF  357 (363)
Q Consensus       340 ~~lv~Ey~~~gsL~~~l~  357 (363)
                      .+|||||+++++|.+++.
T Consensus       411 ~~lv~E~~~g~~L~~~l~  428 (535)
T PRK09605        411 KTIVMEYIGGKDLKDVLE  428 (535)
T ss_pred             CEEEEEecCCCcHHHHHH
Confidence            899999999999998874

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=98.53  E-value=2.7e-07  Score=79.28  Aligned_cols=82  Identities=16%  Similarity=0.244  Sum_probs=64.5

Q ss_pred             eecccCceEEEEEEcCCCCEEEEEEeccCC---h-----hhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEcc
Q 017984          276 KLGQGGSGSVYKGTLPGGEAVAVKRLFYNT---T-----QWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFV  347 (363)
Q Consensus       276 ~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~---~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~  347 (363)
                      .||+|++|.||++.+ +|..+++|......   .     ....++.+|++++..++|+++.....+....+..+|||||+
T Consensus         1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~   79 (199)
T TIGR03724         1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI   79 (199)
T ss_pred             CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence            479999999999986 47789999865321   1     11356889999999999888766666666677789999999


Q ss_pred             CCCChhHHhhc
Q 017984          348 PNQSLLDNLFD  358 (363)
Q Consensus       348 ~~gsL~~~l~~  358 (363)
                      +|++|.+++..
T Consensus        80 ~g~~l~~~~~~   90 (199)
T TIGR03724        80 EGKPLKDVIEE   90 (199)
T ss_pred             CCccHHHHHhh
Confidence            99999988754

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=98.52  E-value=2.8e-07  Score=81.46  Aligned_cols=75  Identities=16%  Similarity=0.063  Sum_probs=62.5

Q ss_pred             cCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEccCCCChhHHhhc
Q 017984          280 GGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQSLLDNLFD  358 (363)
Q Consensus       280 G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~~~gsL~~~l~~  358 (363)
                      |.++.||++.. .+++.+|+|++....     .+.+|...+....||||+++++++...+..+|||||+++|+|.+++.+
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~   78 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK   78 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence            78999999996 468899999997542     234556666666799999999999999999999999999999998865


Q ss_pred             C
Q 017984          359 K  359 (363)
Q Consensus       359 ~  359 (363)
                      .
T Consensus        79 ~   79 (237)
T cd05576          79 F   79 (237)
T ss_pred             h
Confidence            4

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=98.52  E-value=4e-08  Score=85.33  Aligned_cols=90  Identities=20%  Similarity=0.310  Sum_probs=75.6

Q ss_pred             cCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC--------ChhhHHHHHHHHHHHhcC-CCCCccceeeEEEeCC
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN--------TTQWVDHFFNEVNLISGI-NHKNLVKLLGCSITGP  338 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~--------~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~  338 (363)
                      +.|...+.||.|..+.|-++.. .+|++.|+|++...        .....++-.+|+.+|+++ -||+|+++.+.++.+.
T Consensus        17 ~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~s   96 (411)
T KOG0599|consen   17 AKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDA   96 (411)
T ss_pred             hhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcc
Confidence            4567788999999999988886 56889999999632        112245568999999998 5999999999999999


Q ss_pred             eeEEEEEccCCCChhHHhhc
Q 017984          339 ESLLVYEFVPNQSLLDNLFD  358 (363)
Q Consensus       339 ~~~lv~Ey~~~gsL~~~l~~  358 (363)
                      .+++|+|.|+.|.|++||..
T Consensus        97 F~FlVFdl~prGELFDyLts  116 (411)
T KOG0599|consen   97 FVFLVFDLMPRGELFDYLTS  116 (411)
T ss_pred             hhhhhhhhcccchHHHHhhh
Confidence            99999999999999999964

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.51  E-value=2e-08  Score=91.83  Aligned_cols=90  Identities=23%  Similarity=0.214  Sum_probs=73.7

Q ss_pred             cCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccC---ChhhHHHHHHHHHHHhcC-CCCCccceeeEEEeCCeeEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYN---TTQWVDHFFNEVNLISGI-NHKNLVKLLGCSITGPESLLV  343 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv  343 (363)
                      .+|....+||+|+||.|..+..+ +.+.+|||++++.   .....+--+.|-++|.-. +-|.+++|+.++.+-+.+|+|
T Consensus       349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFV  428 (683)
T KOG0696|consen  349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFV  428 (683)
T ss_pred             cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeE
Confidence            45788889999999999999865 3568999999764   223344456777777766 578999999999999999999


Q ss_pred             EEccCCCChhHHhhc
Q 017984          344 YEFVPNQSLLDNLFD  358 (363)
Q Consensus       344 ~Ey~~~gsL~~~l~~  358 (363)
                      |||+.||+|.-+|..
T Consensus       429 MEyvnGGDLMyhiQQ  443 (683)
T KOG0696|consen  429 MEYVNGGDLMYHIQQ  443 (683)
T ss_pred             EEEecCchhhhHHHH
Confidence            999999999988864

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=98.46  E-value=4.4e-08  Score=84.81  Aligned_cols=84  Identities=25%  Similarity=0.352  Sum_probs=69.4

Q ss_pred             CCcCceecccCceEEEEEEc-CCCCEEEEEEeccCC-hhhHHHHHHHHHHHhcC-CCCCccceeeEEEeCCeeEEEEEcc
Q 017984          271 FHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNT-TQWVDHFFNEVNLISGI-NHKNLVKLLGCSITGPESLLVYEFV  347 (363)
Q Consensus       271 ~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~Ey~  347 (363)
                      ++....||.|.||.|+|-.+ +.|+..|||+|+... ....++|+.|.++..+- +.||||+++|....++..||-||.|
T Consensus        66 Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELM  145 (361)
T KOG1006|consen   66 LQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELM  145 (361)
T ss_pred             HHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHH
Confidence            34556799999999999986 569999999998753 35567799999877766 6899999999999999999999999


Q ss_pred             CCCChhHH
Q 017984          348 PNQSLLDN  355 (363)
Q Consensus       348 ~~gsL~~~  355 (363)
                      .- ||+.+
T Consensus       146 d~-SlDkl  152 (361)
T KOG1006|consen  146 DI-SLDKL  152 (361)
T ss_pred             hh-hHHHH
Confidence            54 66543

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=98.38  E-value=1.4e-06  Score=74.90  Aligned_cols=83  Identities=19%  Similarity=0.174  Sum_probs=62.3

Q ss_pred             CCCcCceecccCceEEEEEEcCCCCEEEEEEeccCCh----------------------hhHHHHHHHHHHHhcCCCCC-
Q 017984          270 YFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTT----------------------QWVDHFFNEVNLISGINHKN-  326 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~----------------------~~~~~~~~E~~~l~~l~h~n-  326 (363)
                      .+...+.||+|+||.||++..++|+.||||+++....                      .....+.+|..++..+.|++ 
T Consensus        16 ~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i   95 (198)
T cd05144          16 VESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGF   95 (198)
T ss_pred             hhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCC
Confidence            3667889999999999999988899999998764321                      01123678899999998874 


Q ss_pred             -ccceeeEEEeCCeeEEEEEccCCCChhHHh
Q 017984          327 -LVKLLGCSITGPESLLVYEFVPNQSLLDNL  356 (363)
Q Consensus       327 -iv~l~~~~~~~~~~~lv~Ey~~~gsL~~~l  356 (363)
                       +.+.++    ....++||||+++++|.+.+
T Consensus        96 ~v~~~~~----~~~~~lv~e~~~g~~L~~~~  122 (198)
T cd05144          96 PVPKPID----WNRHAVVMEYIDGVELYRVR  122 (198)
T ss_pred             CCCceee----cCCceEEEEEeCCcchhhcc
Confidence             444433    24568999999999987654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=98.35  E-value=1e-07  Score=80.91  Aligned_cols=84  Identities=20%  Similarity=0.376  Sum_probs=70.2

Q ss_pred             ccCCCcCceecccCceEEEEEE-cCCCCEEEEEEeccCChhhHHHHHHHHHHHhcCC-CCCccceeeEEEeC--CeeEEE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGT-LPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGIN-HKNLVKLLGCSITG--PESLLV  343 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~--~~~~lv  343 (363)
                      .++|+..+++|+|.+++||.|. ..+.+.++||++++-.   .+.+.+|+.+|.+|. ||||++|++...++  ....||
T Consensus        37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk---kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLi  113 (338)
T KOG0668|consen   37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK---KKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLI  113 (338)
T ss_pred             cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH---HHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhH
Confidence            4667888899999999999998 4567889999997542   346889999999997 99999999988765  457899


Q ss_pred             EEccCCCChhH
Q 017984          344 YEFVPNQSLLD  354 (363)
Q Consensus       344 ~Ey~~~gsL~~  354 (363)
                      +||+++-+...
T Consensus       114 FE~v~n~Dfk~  124 (338)
T KOG0668|consen  114 FEYVNNTDFKQ  124 (338)
T ss_pred             hhhhccccHHH
Confidence            99999877654

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=98.22  E-value=3.8e-06  Score=83.71  Aligned_cols=90  Identities=23%  Similarity=0.281  Sum_probs=60.4

Q ss_pred             hccCCCcCceecccCceEEEEEEcC-C----CCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeE------EE
Q 017984          267 ATNYFHESNKLGQGGSGSVYKGTLP-G----GEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGC------SI  335 (363)
Q Consensus       267 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~----g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~------~~  335 (363)
                      ..++|...++||+|+||.||++.+. +    +..||+|++.....  .+.+.+|  .+....+.+++.++..      ..
T Consensus       130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~--~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~  205 (566)
T PLN03225        130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA--VEIWMNE--RVRRACPNSCADFVYGFLEPVSSK  205 (566)
T ss_pred             ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch--hHHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence            4678899999999999999999974 4    68999998864322  1222222  1222223333322221      24


Q ss_pred             eCCeeEEEEEccCCCChhHHhhcCC
Q 017984          336 TGPESLLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       336 ~~~~~~lv~Ey~~~gsL~~~l~~~~  360 (363)
                      .+.+.+|||||+++++|.+++.+..
T Consensus       206 ~~~~~~LV~ey~~~gsL~~~l~~~~  230 (566)
T PLN03225        206 KEDEYWLVWRYEGESTLADLMQSKE  230 (566)
T ss_pred             cCCceEEEEEecCCCcHHHHHHhcC
Confidence            5668999999999999999987653

>smart00090 RIO RIO-like kinase

Probab=98.21  E-value=4e-06  Score=74.10  Aligned_cols=83  Identities=18%  Similarity=0.125  Sum_probs=60.7

Q ss_pred             CCCcCceecccCceEEEEEE--cCCCCEEEEEEeccCChh------------------------hHHHHHHHHHHHhcCC
Q 017984          270 YFHESNKLGQGGSGSVYKGT--LPGGEAVAVKRLFYNTTQ------------------------WVDHFFNEVNLISGIN  323 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~--~~~g~~vavK~l~~~~~~------------------------~~~~~~~E~~~l~~l~  323 (363)
                      .|...+.||+|++|.||++.  ..+|+.||+|+++.....                        ....+.+|+..+.++.
T Consensus        29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~  108 (237)
T smart00090       29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY  108 (237)
T ss_pred             hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            46778899999999999998  567999999998743210                        1123678999999997


Q ss_pred             CCC--ccceeeEEEeCCeeEEEEEccCCCChhHHh
Q 017984          324 HKN--LVKLLGCSITGPESLLVYEFVPNQSLLDNL  356 (363)
Q Consensus       324 h~n--iv~l~~~~~~~~~~~lv~Ey~~~gsL~~~l  356 (363)
                      +.+  +.+++.   . ...+|||||+++++|..++
T Consensus       109 ~~~i~~p~~~~---~-~~~~lV~E~~~g~~L~~~~  139 (237)
T smart00090      109 EAGVPVPKPIA---W-RRNVLVMEFIGGDGLPAPR  139 (237)
T ss_pred             hcCCCCCeeeE---e-cCceEEEEEecCCcccccc
Confidence            533  333333   2 2358999999998887654

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=98.16  E-value=1.5e-06  Score=79.79  Aligned_cols=94  Identities=23%  Similarity=0.398  Sum_probs=78.8

Q ss_pred             HHHHhccCCCcCceecccCceEEEEEEcC----CCCEEEEEEeccCChhhHHHHHHHHHHHhcCC-CCCccceeeEEEeC
Q 017984          263 TLEKATNYFHESNKLGQGGSGSVYKGTLP----GGEAVAVKRLFYNTTQWVDHFFNEVNLISGIN-HKNLVKLLGCSITG  337 (363)
Q Consensus       263 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~----~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~  337 (363)
                      .+....+.|...++||+|.|+.||++.+.    ..+.||+|.+...+.  .....+|+++|..+. +.||+++.+++..+
T Consensus        30 ~~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~--p~ri~~El~~L~~~gG~~ni~~~~~~~rnn  107 (418)
T KOG1167|consen   30 DIPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS--PSRILNELEMLYRLGGSDNIIKLNGCFRNN  107 (418)
T ss_pred             hhhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccC--chHHHHHHHHHHHhccchhhhcchhhhccC
Confidence            34455667889999999999999999863    367899999976433  245889999999995 99999999999999


Q ss_pred             CeeEEEEEccCCCChhHHhhc
Q 017984          338 PESLLVYEFVPNQSLLDNLFD  358 (363)
Q Consensus       338 ~~~~lv~Ey~~~gsL~~~l~~  358 (363)
                      +...+|+||+++-+..+++..
T Consensus       108 d~v~ivlp~~~H~~f~~l~~~  128 (418)
T KOG1167|consen  108 DQVAIVLPYFEHDRFRDLYRS  128 (418)
T ss_pred             CeeEEEecccCccCHHHHHhc
Confidence            999999999999888777654

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=98.15  E-value=2.8e-08  Score=85.32  Aligned_cols=88  Identities=25%  Similarity=0.455  Sum_probs=68.5

Q ss_pred             CCcCceecccCceEEEEEEcC-CCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEe--------CCe
Q 017984          271 FHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSIT--------GPE  339 (363)
Q Consensus       271 ~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--------~~~  339 (363)
                      |....+||+|.||.||++... .|+.||+|++...  .......-++|+.+|..++|+|++.++..|..        ...
T Consensus        19 yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t   98 (376)
T KOG0669|consen   19 YEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRAT   98 (376)
T ss_pred             HHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccce
Confidence            445668999999999999864 4778898876432  22223446899999999999999999998764        235


Q ss_pred             eEEEEEccCCCChhHHhhcC
Q 017984          340 SLLVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       340 ~~lv~Ey~~~gsL~~~l~~~  359 (363)
                      +|||+.++++ +|.-+|.+.
T Consensus        99 ~ylVf~~ceh-DLaGlLsn~  117 (376)
T KOG0669|consen   99 FYLVFDFCEH-DLAGLLSNR  117 (376)
T ss_pred             eeeeHHHhhh-hHHHHhcCc
Confidence            8999999987 888888654

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=98.13  E-value=5.1e-07  Score=79.55  Aligned_cols=89  Identities=22%  Similarity=0.206  Sum_probs=69.8

Q ss_pred             ccCCCc-CceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcC-CCCCccceeeEEEe----CCee
Q 017984          268 TNYFHE-SNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGI-NHKNLVKLLGCSIT----GPES  340 (363)
Q Consensus       268 ~~~~~~-~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~----~~~~  340 (363)
                      +++|.. .++||-|-.|.|..+.. ++++.+|+|++....     ..++|+++.-.. .|||||++++++..    ...+
T Consensus        60 tedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds~-----KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcL  134 (400)
T KOG0604|consen   60 TEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDSP-----KARREVELHWMASGHPHIVSIIDVYENSYQGRKCL  134 (400)
T ss_pred             hhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcCH-----HHHhHhhhhhhhcCCCceEEeehhhhhhccCceee
Confidence            444443 35799999999999986 568899999986432     246788776655 59999999998764    4578


Q ss_pred             EEEEEccCCCChhHHhhcCCC
Q 017984          341 LLVYEFVPNQSLLDNLFDKML  361 (363)
Q Consensus       341 ~lv~Ey~~~gsL~~~l~~~~~  361 (363)
                      ++|||+|+||+|+..|.++..
T Consensus       135 LiVmE~meGGeLfsriq~~g~  155 (400)
T KOG0604|consen  135 LIVMECMEGGELFSRIQDRGD  155 (400)
T ss_pred             EeeeecccchHHHHHHHHccc
Confidence            999999999999999987653

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=98.12  E-value=3.7e-07  Score=79.41  Aligned_cols=87  Identities=23%  Similarity=0.416  Sum_probs=72.3

Q ss_pred             cCceecccCceEEEEEEcCCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEccCCC
Q 017984          273 ESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQ  350 (363)
Q Consensus       273 ~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~~~g  350 (363)
                      ...+|.+...|+.|+|+++ |..+++|++...  .....+.|..|...|+-+.||||..++|.|..+.++.++..|||.|
T Consensus       194 l~tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~g  272 (448)
T KOG0195|consen  194 LITKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFG  272 (448)
T ss_pred             hhhhhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccch
Confidence            3446788889999999997 555667777532  3333456999999999999999999999999999999999999999


Q ss_pred             ChhHHhhcCC
Q 017984          351 SLLDNLFDKM  360 (363)
Q Consensus       351 sL~~~l~~~~  360 (363)
                      +|...|++..
T Consensus       273 slynvlhe~t  282 (448)
T KOG0195|consen  273 SLYNVLHEQT  282 (448)
T ss_pred             HHHHHHhcCc
Confidence            9999998754

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=98.11  E-value=6e-06  Score=66.74  Aligned_cols=79  Identities=18%  Similarity=0.113  Sum_probs=65.5

Q ss_pred             cCceecccCceEEEEEEcCCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCC--CCccceeeEEEeCCeeEEEEEccCCC
Q 017984          273 ESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINH--KNLVKLLGCSITGPESLLVYEFVPNQ  350 (363)
Q Consensus       273 ~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~lv~Ey~~~g  350 (363)
                      ..+.|++|.++.||++...+ ..+++|.......  ...+.+|+.++..++|  .++.+++......+..+++|||++++
T Consensus         2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~   78 (155)
T cd05120           2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGE   78 (155)
T ss_pred             cceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCe
Confidence            35679999999999999754 7899998865433  4578999999999976  58899988888778899999999998


Q ss_pred             ChhH
Q 017984          351 SLLD  354 (363)
Q Consensus       351 sL~~  354 (363)
                      ++..
T Consensus        79 ~~~~   82 (155)
T cd05120          79 TLDE   82 (155)
T ss_pred             eccc
Confidence            7753

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.07  E-value=6.6e-06  Score=77.12  Aligned_cols=90  Identities=22%  Similarity=0.317  Sum_probs=72.8

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcCC-----C---CCccceeeEEEe--
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGIN-----H---KNLVKLLGCSIT--  336 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-----h---~niv~l~~~~~~--  336 (363)
                      ..+|...++||=|.|++||.+.. ++.+.||+|+.+.. ....+.-+.||++|++++     |   .+||+|++.|..  
T Consensus        77 ~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA-qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsG  155 (590)
T KOG1290|consen   77 GGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA-QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSG  155 (590)
T ss_pred             CceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh-hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecC
Confidence            35688899999999999999995 56789999998764 334456789999999873     2   479999999875  


Q ss_pred             --CCeeEEEEEccCCCChhHHhhcC
Q 017984          337 --GPESLLVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       337 --~~~~~lv~Ey~~~gsL~~~l~~~  359 (363)
                        +.+++||+|++ |-+|..+|...
T Consensus       156 pNG~HVCMVfEvL-GdnLLklI~~s  179 (590)
T KOG1290|consen  156 PNGQHVCMVFEVL-GDNLLKLIKYS  179 (590)
T ss_pred             CCCcEEEEEehhh-hhHHHHHHHHh
Confidence              46899999999 66898888653

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=97.97  E-value=1.1e-05  Score=69.21  Aligned_cols=86  Identities=20%  Similarity=0.311  Sum_probs=69.2

Q ss_pred             ccCCCcCceecccCceEEEEEE-cCCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCC-CCccceeeEEEeCCeeEEEEE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGT-LPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINH-KNLVKLLGCSITGPESLLVYE  345 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~lv~E  345 (363)
                      ...|...++||.|+||.+|.|. ..+|++||||.=+.....  ..+.-|..+...|+| ..|..+..+..+...-.||||
T Consensus        14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~h--pqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMd   91 (341)
T KOG1163|consen   14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKH--PQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMD   91 (341)
T ss_pred             ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCC--cchhHHHHHHHHhccCCCCchhhhhccccccceeeee
Confidence            4568899999999999999998 477999999976543222  347788999998875 677777777788888999999


Q ss_pred             ccCCCChhHHh
Q 017984          346 FVPNQSLLDNL  356 (363)
Q Consensus       346 y~~~gsL~~~l  356 (363)
                      .+ |-||+++.
T Consensus        92 LL-GPsLEdLf  101 (341)
T KOG1163|consen   92 LL-GPSLEDLF  101 (341)
T ss_pred             cc-CccHHHHH
Confidence            88 77888765

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.94  E-value=7.3e-07  Score=77.60  Aligned_cols=87  Identities=22%  Similarity=0.362  Sum_probs=70.4

Q ss_pred             CCcCceecccCceEEEEEEc-CCCCEEEEEEecc--CChhhHHHHHHHHHHHhcCCCCCccceeeEEEeC-----CeeEE
Q 017984          271 FHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFY--NTTQWVDHFFNEVNLISGINHKNLVKLLGCSITG-----PESLL  342 (363)
Q Consensus       271 ~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~~l  342 (363)
                      .+..+.||-|.||.||..+. ++|+.||+|++..  ..-...+.+.+|+.+|.-++|.|++.+++.....     +++|+
T Consensus        55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV  134 (449)
T KOG0664|consen   55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYV  134 (449)
T ss_pred             CCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHH
Confidence            45678999999999999997 5799999998863  2334456799999999999999999999877654     36889


Q ss_pred             EEEccCCCChhHHhhc
Q 017984          343 VYEFVPNQSLLDNLFD  358 (363)
Q Consensus       343 v~Ey~~~gsL~~~l~~  358 (363)
                      ++|.|.. +|..+|..
T Consensus       135 ~TELmQS-DLHKIIVS  149 (449)
T KOG0664|consen  135 LTELMQS-DLHKIIVS  149 (449)
T ss_pred             HHHHHHh-hhhheecc
Confidence            9999965 88777653

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=97.94  E-value=1.6e-05  Score=76.59  Aligned_cols=84  Identities=20%  Similarity=0.150  Sum_probs=56.6

Q ss_pred             CceecccCceEEEEEEcCCCCEEEEEEeccCChhhH----------------------------------------HHHH
Q 017984          274 SNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWV----------------------------------------DHFF  313 (363)
Q Consensus       274 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~----------------------------------------~~~~  313 (363)
                      .+.||.|++|.||++++++|+.||||+.++.-....                                        -.|.
T Consensus       122 ~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~  201 (437)
T TIGR01982       122 EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR  201 (437)
T ss_pred             CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence            468999999999999999999999999865421100                                        0245


Q ss_pred             HHHHHHhcC----CCCCccceeeEEE-eCCeeEEEEEccCCCChhHHhh
Q 017984          314 NEVNLISGI----NHKNLVKLLGCSI-TGPESLLVYEFVPNQSLLDNLF  357 (363)
Q Consensus       314 ~E~~~l~~l----~h~niv~l~~~~~-~~~~~~lv~Ey~~~gsL~~~l~  357 (363)
                      +|...+.++    +|.+-+.+-..+. .....+|||||++|++|.+++.
T Consensus       202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~  250 (437)
T TIGR01982       202 REAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAA  250 (437)
T ss_pred             HHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHH
Confidence            566555544    2332233322332 2345789999999999988764

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=97.92  E-value=7.1e-06  Score=81.43  Aligned_cols=84  Identities=27%  Similarity=0.418  Sum_probs=68.2

Q ss_pred             CCcCceecccCceE-EEEEEcCCCCEEEEEEeccCChhhHHHHHHHHHHHhcC-CCCCccceeeEEEeCCeeEEEEEccC
Q 017984          271 FHESNKLGQGGSGS-VYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGI-NHKNLVKLLGCSITGPESLLVYEFVP  348 (363)
Q Consensus       271 ~~~~~~lg~G~~g~-Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~Ey~~  348 (363)
                      |...+++|.|+-|+ ||+|.+. |++||||++-...   ..-..+|+..|+.- .|||||++++.-.+++.+||..|.|.
T Consensus       511 ~~~~eilG~Gs~Gt~Vf~G~ye-~R~VAVKrll~e~---~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~  586 (903)
T KOG1027|consen  511 FSPKEILGYGSNGTVVFRGVYE-GREVAVKRLLEEF---FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCA  586 (903)
T ss_pred             eccHHHcccCCCCcEEEEEeeC-CceehHHHHhhHh---HHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhh
Confidence            44556788888765 7999986 8899999985432   23357999999988 59999999998888899999999995


Q ss_pred             CCChhHHhhcC
Q 017984          349 NQSLLDNLFDK  359 (363)
Q Consensus       349 ~gsL~~~l~~~  359 (363)
                      - +|.+++...
T Consensus       587 ~-sL~dlie~~  596 (903)
T KOG1027|consen  587 C-SLQDLIESS  596 (903)
T ss_pred             h-hHHHHHhcc
Confidence            4 999998763

>PRK12274 serine/threonine protein kinase; Provisional

Probab=97.88  E-value=6.2e-05  Score=64.56  Aligned_cols=80  Identities=10%  Similarity=-0.022  Sum_probs=60.2

Q ss_pred             CcCceecccCceEEEEEEcCCCCEEEEEEeccCCh----hhHHHHHHHHHHHhcCC-CCCccceeeEEEeCCeeEEEEEc
Q 017984          272 HESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTT----QWVDHFFNEVNLISGIN-HKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       272 ~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~----~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      .....|++|+||+||...- .+..++.+.+.....    -....|.+|+++|.+|+ |+++++++++    +..+++|||
T Consensus         5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmey   79 (218)
T PRK12274          5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSY   79 (218)
T ss_pred             ccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEee
Confidence            3566899999999996655 577787777754322    11225889999999995 5889999885    446999999


Q ss_pred             cCCCChhHHh
Q 017984          347 VPNQSLLDNL  356 (363)
Q Consensus       347 ~~~gsL~~~l  356 (363)
                      ++|.+|.+.+
T Consensus        80 I~G~~L~~~~   89 (218)
T PRK12274         80 LAGAAMYQRP   89 (218)
T ss_pred             ecCccHHhhh
Confidence            9999987654

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=97.85  E-value=9.5e-06  Score=68.14  Aligned_cols=91  Identities=21%  Similarity=0.265  Sum_probs=73.5

Q ss_pred             HHHhccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC-ChhhHHHHHHHHHHHhcC-CCCCccceeeEEEeCCee
Q 017984          264 LEKATNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN-TTQWVDHFFNEVNLISGI-NHKNLVKLLGCSITGPES  340 (363)
Q Consensus       264 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~  340 (363)
                      +..+.+.+.....||+|++|.|-+-++ ++|+..|+|++... ..+..++.++|+.+..+- ..|.+|+++|........
T Consensus        41 ~eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdv  120 (282)
T KOG0984|consen   41 FEVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDV  120 (282)
T ss_pred             cccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccE
Confidence            444555566677899999999988875 67999999999854 445567788999877665 689999999999999999


Q ss_pred             EEEEEccCCCChhHH
Q 017984          341 LLVYEFVPNQSLLDN  355 (363)
Q Consensus       341 ~lv~Ey~~~gsL~~~  355 (363)
                      |+-||.|.. ||..+
T Consensus       121 wIcME~M~t-Sldkf  134 (282)
T KOG0984|consen  121 WICMELMDT-SLDKF  134 (282)
T ss_pred             EEeHHHhhh-hHHHH
Confidence            999999965 66554

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=97.80  E-value=2e-05  Score=77.34  Aligned_cols=86  Identities=17%  Similarity=0.180  Sum_probs=55.9

Q ss_pred             cCCCcCceecccCceEEEEEEcCC-CCEEEEEEeccCChh----------------------------------hHH---
Q 017984          269 NYFHESNKLGQGGSGSVYKGTLPG-GEAVAVKRLFYNTTQ----------------------------------WVD---  310 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~~~-g~~vavK~l~~~~~~----------------------------------~~~---  310 (363)
                      ..|.. +.||.|++|.||++++++ |+.||||++++.-..                                  ..+   
T Consensus       120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~  198 (537)
T PRK04750        120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH  198 (537)
T ss_pred             HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence            34555 789999999999999977 999999999754110                                  011   


Q ss_pred             ---HHHHHHHHHhcC----CCCCccceeeEEEe-CCeeEEEEEccCCCChhHH
Q 017984          311 ---HFFNEVNLISGI----NHKNLVKLLGCSIT-GPESLLVYEFVPNQSLLDN  355 (363)
Q Consensus       311 ---~~~~E~~~l~~l----~h~niv~l~~~~~~-~~~~~lv~Ey~~~gsL~~~  355 (363)
                         +|.+|+.-+.++    .+.+.+.+-.++.+ ....+|||||++|+.|.++
T Consensus       199 ~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~  251 (537)
T PRK04750        199 DELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDV  251 (537)
T ss_pred             HhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhH
Confidence               134444444433    23333333333332 3456799999999999764

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=97.80  E-value=1.3e-05  Score=73.06  Aligned_cols=93  Identities=22%  Similarity=0.213  Sum_probs=74.9

Q ss_pred             ccCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccCChhhHHHHHHHHHHHhcCCC--C----CccceeeEEEeCCee
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYNTTQWVDHFFNEVNLISGINH--K----NLVKLLGCSITGPES  340 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h--~----niv~l~~~~~~~~~~  340 (363)
                      ++.|.....+|+|.||.|-++..+ .+..||||+++.- ...++.-+-|++++.++.+  |    -+|.+.+++.-.++.
T Consensus        88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V-~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghi  166 (415)
T KOG0671|consen   88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV-DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHI  166 (415)
T ss_pred             ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH-HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCce
Confidence            677889999999999999999964 4789999999743 2334567889999999942  2    367777888889999


Q ss_pred             EEEEEccCCCChhHHhhcCCCC
Q 017984          341 LLVYEFVPNQSLLDNLFDKMLS  362 (363)
Q Consensus       341 ~lv~Ey~~~gsL~~~l~~~~~~  362 (363)
                      +||+|.| |-|+.++|.++...
T Consensus       167 Civfell-G~S~~dFlk~N~y~  187 (415)
T KOG0671|consen  167 CIVFELL-GLSTFDFLKENNYI  187 (415)
T ss_pred             EEEEecc-ChhHHHHhccCCcc
Confidence            9999988 66999999886543

>PHA02882 putative serine/threonine kinase; Provisional

Probab=97.78  E-value=0.00014  Score=66.46  Aligned_cols=88  Identities=16%  Similarity=0.173  Sum_probs=58.0

Q ss_pred             cCCCcCceecccCceEEEEEEcCC----CCEEEEEEeccCChhh-----------HHHHHHHHHHHhcCCCCCccceeeE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTLPG----GEAVAVKRLFYNTTQW-----------VDHFFNEVNLISGINHKNLVKLLGC  333 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~~~----g~~vavK~l~~~~~~~-----------~~~~~~E~~~l~~l~h~niv~l~~~  333 (363)
                      +.|...++||+|+||.||++...+    +..+++|.........           ......+...+..++|+||++++++
T Consensus        12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~   91 (294)
T PHA02882         12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC   91 (294)
T ss_pred             CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence            568889999999999999999643    3456666543221111           0112334455667799999999997


Q ss_pred             EEeCC----eeEEEEEccCCCChhHHhh
Q 017984          334 SITGP----ESLLVYEFVPNQSLLDNLF  357 (363)
Q Consensus       334 ~~~~~----~~~lv~Ey~~~gsL~~~l~  357 (363)
                      +....    ..++++|++.. ++.+.+.
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~  118 (294)
T PHA02882         92 GSFKRCRMYYRFILLEKLVE-NTKEIFK  118 (294)
T ss_pred             eeEecCCceEEEEEEehhcc-CHHHHHH
Confidence            76543    45788887743 5555543

>cd05119 RIO RIO kinase family, catalytic domain

Probab=97.77  E-value=6.8e-05  Score=63.49  Aligned_cols=74  Identities=23%  Similarity=0.257  Sum_probs=49.1

Q ss_pred             CceecccCceEEEEEEcCCCCEEEEEEeccCChh--hHHH----------------------HHHHHHHHhcCCCCC--c
Q 017984          274 SNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQ--WVDH----------------------FFNEVNLISGINHKN--L  327 (363)
Q Consensus       274 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~--~~~~----------------------~~~E~~~l~~l~h~n--i  327 (363)
                      .+.||+|+||.||++...+++.||||++......  ....                      ...|...+..+.+..  +
T Consensus         2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~   81 (187)
T cd05119           2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV   81 (187)
T ss_pred             CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence            4679999999999999888999999998753211  1111                      135555666654432  3


Q ss_pred             cceeeEEEeCCeeEEEEEccCCCC
Q 017984          328 VKLLGCSITGPESLLVYEFVPNQS  351 (363)
Q Consensus       328 v~l~~~~~~~~~~~lv~Ey~~~gs  351 (363)
                      .+.+++    ...+|||||+++++
T Consensus        82 ~~~~~~----~~~~lv~e~~~g~~  101 (187)
T cd05119          82 PKPIDL----NRHVLVMEFIGGDG  101 (187)
T ss_pred             CceEec----CCCEEEEEEeCCCC
Confidence            344332    24689999999954

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=97.72  E-value=2.7e-06  Score=80.10  Aligned_cols=91  Identities=22%  Similarity=0.210  Sum_probs=75.4

Q ss_pred             CCCcCceecccCceEEEEEEcCCC-CEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEE
Q 017984          270 YFHESNKLGQGGSGSVYKGTLPGG-EAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYE  345 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~~~~g-~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  345 (363)
                      ++.....||-|+||+|-.+..... ..+|+|++++.   +....+....|-.+|...+.|.||+|+--+.+...+||+||
T Consensus       421 dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmE  500 (732)
T KOG0614|consen  421 DLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLME  500 (732)
T ss_pred             hhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHH
Confidence            445566799999999998886432 24889988753   33445568899999999999999999999999999999999


Q ss_pred             ccCCCChhHHhhcCC
Q 017984          346 FVPNQSLLDNLFDKM  360 (363)
Q Consensus       346 y~~~gsL~~~l~~~~  360 (363)
                      -|-||.|+..|+++.
T Consensus       501 aClGGElWTiLrdRg  515 (732)
T KOG0614|consen  501 ACLGGELWTILRDRG  515 (732)
T ss_pred             hhcCchhhhhhhhcC
Confidence            999999999998754

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=97.67  E-value=0.00027  Score=64.20  Aligned_cols=87  Identities=32%  Similarity=0.420  Sum_probs=73.0

Q ss_pred             CCcCceecccCceEEEEEEcCCCCEEEEEEeccCCh---hhHHHHHHHHHHHhcCCCC-CccceeeEEEeCCeeEEEEEc
Q 017984          271 FHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTT---QWVDHFFNEVNLISGINHK-NLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       271 ~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~h~-niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      |.....||.|+|+.||++...  ..+++|.+.....   .....|.+|+.++..+.|+ +++++...+......++++||
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~   79 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY   79 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence            456678999999999999976  7789999975422   2467799999999999988 799999999777778999999


Q ss_pred             cCCCChhHHhhcC
Q 017984          347 VPNQSLLDNLFDK  359 (363)
Q Consensus       347 ~~~gsL~~~l~~~  359 (363)
                      +.+++|.+++...
T Consensus        80 ~~~~~l~~~~~~~   92 (384)
T COG0515          80 VDGGSLEDLLKKI   92 (384)
T ss_pred             CCCCcHHHHHHhc
Confidence            9999999776654

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=97.64  E-value=0.00011  Score=68.14  Aligned_cols=89  Identities=20%  Similarity=0.209  Sum_probs=69.2

Q ss_pred             CCCcCceecccCceEEEEEEcCC--CCEEEEEEeccCChhhHHHHHHHHHHHhcCCC----CCccceeeEE-EeCCeeEE
Q 017984          270 YFHESNKLGQGGSGSVYKGTLPG--GEAVAVKRLFYNTTQWVDHFFNEVNLISGINH----KNLVKLLGCS-ITGPESLL  342 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~~~~--g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h----~niv~l~~~~-~~~~~~~l  342 (363)
                      .|....+||+|+||.||++....  ...+|+|............+..|+.++..+.+    +++..++... ..+...+|
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i   98 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI   98 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence            78899999999999999999644  34788888765433222268889999988863    5888888888 47778899


Q ss_pred             EEEccCCCChhHHhhcC
Q 017984          343 VYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       343 v~Ey~~~gsL~~~l~~~  359 (363)
                      ||+.+ |-+|.++....
T Consensus        99 VM~l~-G~sL~dl~~~~  114 (322)
T KOG1164|consen   99 VMSLL-GPSLEDLRKRN  114 (322)
T ss_pred             EEecc-CccHHHHHHhC
Confidence            99988 77999976543

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=97.59  E-value=4.4e-05  Score=66.78  Aligned_cols=89  Identities=17%  Similarity=0.242  Sum_probs=70.1

Q ss_pred             cCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccCChhhHHHHHHHHHHHhcC-CCCCccceee-EEEeCCeeEEEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYNTTQWVDHFFNEVNLISGI-NHKNLVKLLG-CSITGPESLLVYE  345 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~-~~~~~~~~~lv~E  345 (363)
                      +.|.+.+.||+|.||.+..+.++ +.+.+++|.+... ....++|.+|..---.| .|.||+.-+. .+.+.+..++++|
T Consensus        24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p-~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE  102 (378)
T KOG1345|consen   24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRP-QTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQE  102 (378)
T ss_pred             hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcc-hhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeec
Confidence            44667889999999999999974 4678999988654 23356799998766666 5899998775 4667778889999


Q ss_pred             ccCCCChhHHhhc
Q 017984          346 FVPNQSLLDNLFD  358 (363)
Q Consensus       346 y~~~gsL~~~l~~  358 (363)
                      |+|.|||.+-+..
T Consensus       103 ~aP~gdL~snv~~  115 (378)
T KOG1345|consen  103 FAPRGDLRSNVEA  115 (378)
T ss_pred             cCccchhhhhcCc
Confidence            9999999876654

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=97.57  E-value=5.2e-05  Score=73.45  Aligned_cols=89  Identities=25%  Similarity=0.276  Sum_probs=72.5

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcC-CCCCccceeeEEEeCCeeEEEEE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGI-NHKNLVKLLGCSITGPESLLVYE  345 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E  345 (363)
                      ++.|.....+|.|+|+.|-.+.. ++++..++|++.....+    -.+|+.++... +||||+++.+.+.++.+.|+|||
T Consensus       321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~~----~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e  396 (612)
T KOG0603|consen  321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRADD----NQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVME  396 (612)
T ss_pred             chhhccccccCCCCccceeeeeccccccchhheeccccccc----cccccchhhhhcCCCcceeecceecCCceeeeeeh
Confidence            55677777899999999999885 56889999999765222    34567666555 79999999999999999999999


Q ss_pred             ccCCCChhHHhhcCC
Q 017984          346 FVPNQSLLDNLFDKM  360 (363)
Q Consensus       346 y~~~gsL~~~l~~~~  360 (363)
                      .+.||-|.+.+..++
T Consensus       397 ~l~g~ell~ri~~~~  411 (612)
T KOG0603|consen  397 LLDGGELLRRIRSKP  411 (612)
T ss_pred             hccccHHHHHHHhcc
Confidence            999999988777654

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=97.54  E-value=0.00012  Score=65.90  Aligned_cols=87  Identities=20%  Similarity=0.263  Sum_probs=68.0

Q ss_pred             ccCCCcCceecccCceEEEEEE-cCCCCEEEEEEeccCChhhHHHHHHHHHHHhcCC-CCCccceeeEEEeCCeeEEEEE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGT-LPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGIN-HKNLVKLLGCSITGPESLLVYE  345 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~E  345 (363)
                      .-+|.++++||+|.||.++.|. +-+++.||||.=...+.  .-++.-|.+..+.|. .++|...+-+-.++.+-.||+|
T Consensus        27 G~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~--APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVid  104 (449)
T KOG1165|consen   27 GPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSE--APQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVID  104 (449)
T ss_pred             cccceeccccccCcceeeecccccccCceEEEEeccccCC--cchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhh
Confidence            3468899999999999999998 56789999996543221  234666777777764 6899998888888888999999


Q ss_pred             ccCCCChhHHhh
Q 017984          346 FVPNQSLLDNLF  357 (363)
Q Consensus       346 y~~~gsL~~~l~  357 (363)
                      .+ |-||+++..
T Consensus       105 LL-GPSLEDLFD  115 (449)
T KOG1165|consen  105 LL-GPSLEDLFD  115 (449)
T ss_pred             hh-CcCHHHHHH
Confidence            88 778888653

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=97.52  E-value=0.00046  Score=61.10  Aligned_cols=86  Identities=14%  Similarity=0.207  Sum_probs=62.3

Q ss_pred             Cceec-ccCceEEEEEEcCCCCEEEEEEeccCC-------------hhhHHHHHHHHHHHhcCCCCCc--cceeeEEEeC
Q 017984          274 SNKLG-QGGSGSVYKGTLPGGEAVAVKRLFYNT-------------TQWVDHFFNEVNLISGINHKNL--VKLLGCSITG  337 (363)
Q Consensus       274 ~~~lg-~G~~g~Vy~~~~~~g~~vavK~l~~~~-------------~~~~~~~~~E~~~l~~l~h~ni--v~l~~~~~~~  337 (363)
                      ...|| .|+.|+||+.... +..++||++....             ......+.+|++++.+|+|++|  ++.+++....
T Consensus        36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~  114 (239)
T PRK01723         36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR  114 (239)
T ss_pred             CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence            45787 7899999998875 6778998875311             1223568899999999998875  6677664432


Q ss_pred             C----eeEEEEEccCC-CChhHHhhcCC
Q 017984          338 P----ESLLVYEFVPN-QSLLDNLFDKM  360 (363)
Q Consensus       338 ~----~~~lv~Ey~~~-gsL~~~l~~~~  360 (363)
                      .    ..+|||||+++ .+|.+++.+..
T Consensus       115 ~~~~~~~~lV~e~l~G~~~L~~~l~~~~  142 (239)
T PRK01723        115 HGLFYRADILIERIEGARDLVALLQEAP  142 (239)
T ss_pred             cCcceeeeEEEEecCCCCCHHHHHhcCC
Confidence            2    23599999997 69988886543

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=97.51  E-value=4.7e-05  Score=66.65  Aligned_cols=78  Identities=19%  Similarity=0.370  Sum_probs=65.8

Q ss_pred             CCcCceecccCceEEEEEEc-CCCCEEEEEEeccC-ChhhHHHHHHHHHHHhcCC-CCCccceeeEEEeCCeeEEEEEcc
Q 017984          271 FHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN-TTQWVDHFFNEVNLISGIN-HKNLVKLLGCSITGPESLLVYEFV  347 (363)
Q Consensus       271 ~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~Ey~  347 (363)
                      ++....||.|..|.|++..+ ..|..+|||.+... ..+..++++..+.++.+-+ .|.||+.+|+|..+...++-||.|
T Consensus        94 l~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelM  173 (391)
T KOG0983|consen   94 LENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELM  173 (391)
T ss_pred             hhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHH
Confidence            34456799999999999997 45899999999865 5566777888888887765 899999999999999999999988


Q ss_pred             C
Q 017984          348 P  348 (363)
Q Consensus       348 ~  348 (363)
                      .
T Consensus       174 s  174 (391)
T KOG0983|consen  174 S  174 (391)
T ss_pred             H
Confidence            4

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=97.30  E-value=0.00041  Score=60.16  Aligned_cols=82  Identities=21%  Similarity=0.217  Sum_probs=62.7

Q ss_pred             ceecccCceEEEEEEcCCCCEEEEEEeccCCh-hhHHHHHHHHHHHhcCCCC--CccceeeEEEeC---CeeEEEEEccC
Q 017984          275 NKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTT-QWVDHFFNEVNLISGINHK--NLVKLLGCSITG---PESLLVYEFVP  348 (363)
Q Consensus       275 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~--niv~l~~~~~~~---~~~~lv~Ey~~  348 (363)
                      +.|+.|..+.+|+....+|+.+++|....... .....+.+|.+++..+.+.  ++.+++.+....   +..++||||++
T Consensus         4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~   83 (223)
T cd05154           4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD   83 (223)
T ss_pred             eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence            56889999999999987678899998765322 1345689999999999763  456677766553   25689999999


Q ss_pred             CCChhHHh
Q 017984          349 NQSLLDNL  356 (363)
Q Consensus       349 ~gsL~~~l  356 (363)
                      |++|.+.+
T Consensus        84 G~~l~~~~   91 (223)
T cd05154          84 GRVLRDRL   91 (223)
T ss_pred             CEecCCCC
Confidence            99887755

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=97.26  E-value=0.00021  Score=67.88  Aligned_cols=89  Identities=18%  Similarity=0.207  Sum_probs=71.2

Q ss_pred             ccCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccCChhhHHHHHHHHHHHhcCC------CCCccceeeEEEeCCee
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYNTTQWVDHFFNEVNLISGIN------HKNLVKLLGCSITGPES  340 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~------h~niv~l~~~~~~~~~~  340 (363)
                      -..|.+....|+|-|+.|.++... .|+.||||+|..+... .+.=+.|+++|.+|+      .-|+++|+..|...+++
T Consensus       431 D~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M-~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHL  509 (752)
T KOG0670|consen  431 DSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVM-HKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHL  509 (752)
T ss_pred             cceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHH-hhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhccee
Confidence            345667777899999999999964 4889999999765322 233478999999994      34899999999999999


Q ss_pred             EEEEEccCCCChhHHhhc
Q 017984          341 LLVYEFVPNQSLLDNLFD  358 (363)
Q Consensus       341 ~lv~Ey~~~gsL~~~l~~  358 (363)
                      +||+|-+. -+|.++|.+
T Consensus       510 ClVFE~Ls-lNLRevLKK  526 (752)
T KOG0670|consen  510 CLVFEPLS-LNLREVLKK  526 (752)
T ss_pred             EEEehhhh-chHHHHHHH
Confidence            99999874 489888864

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=97.14  E-value=0.00035  Score=72.24  Aligned_cols=90  Identities=24%  Similarity=0.352  Sum_probs=65.1

Q ss_pred             ccCCCcCceecccCceEEEEEEcCCCCEEEEEEeccCChhhHHHHHHHHHHHhcCC---CCCccceeeEEEeCCeeEEEE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGIN---HKNLVKLLGCSITGPESLLVY  344 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lv~  344 (363)
                      .+.|.+...||+|+||.||+|...+|+.||+|+=+....   .+|.-=.+++.+|+   -+.|.++..++.-.+.-+||+
T Consensus       697 ~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~---WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv~  773 (974)
T KOG1166|consen  697 GEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNP---WEFYICLQVMERLKPQMLPSIMHISSAHVFQNASVLVS  773 (974)
T ss_pred             ceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCc---eeeeehHHHHHhhchhhhcchHHHHHHHccCCcceeee
Confidence            445677778999999999999988899999998765432   12332333444444   244555666666677789999


Q ss_pred             EccCCCChhHHhhcCC
Q 017984          345 EFVPNQSLLDNLFDKM  360 (363)
Q Consensus       345 Ey~~~gsL~~~l~~~~  360 (363)
                      ||.+.|+|.+++..++
T Consensus       774 ey~~~Gtlld~~N~~~  789 (974)
T KOG1166|consen  774 EYSPYGTLLDLINTNK  789 (974)
T ss_pred             eccccccHHHhhccCC
Confidence            9999999999987443

>cd05151 ChoK Choline Kinase (ChoK)

Probab=96.87  E-value=0.0018  Score=53.62  Aligned_cols=77  Identities=18%  Similarity=0.132  Sum_probs=55.3

Q ss_pred             CceecccCceEEEEEEcCCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcc-ceeeEEEeCCeeEEEEEccCCCCh
Q 017984          274 SNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLV-KLLGCSITGPESLLVYEFVPNQSL  352 (363)
Q Consensus       274 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv-~l~~~~~~~~~~~lv~Ey~~~gsL  352 (363)
                      .+.|+.|.++.||+.... +..+++|....... ....+.+|+.++..+.+.+++ +++...  ....++||||++|.++
T Consensus         3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~l   78 (170)
T cd05151           3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSEL   78 (170)
T ss_pred             eeecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCcc
Confidence            356888999999999875 77899998754422 123467899999988665554 444432  3345899999999888


Q ss_pred             hH
Q 017984          353 LD  354 (363)
Q Consensus       353 ~~  354 (363)
                      .+
T Consensus        79 ~~   80 (170)
T cd05151          79 LT   80 (170)
T ss_pred             cc
Confidence            64

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=96.26  E-value=0.0097  Score=49.39  Aligned_cols=80  Identities=16%  Similarity=0.198  Sum_probs=58.0

Q ss_pred             CcCceecccCceEEEEEEcCCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEccCCCC
Q 017984          272 HESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQS  351 (363)
Q Consensus       272 ~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~~~gs  351 (363)
                      .....|++|.++.||++.+. |..+|+|+-+..+  .+..+..|+++|..+.-.++.+=+-.+   +.-++.|||+.|-.
T Consensus        25 ~v~~~L~KG~~s~Vyl~~~~-~~~~a~Kvrr~ds--~r~~l~kEakiLeil~g~~~~p~vy~y---g~~~i~me~i~G~~   98 (201)
T COG2112          25 RVEKELAKGTTSVVYLGEWR-GGEVALKVRRRDS--PRRNLEKEAKILEILAGEGVTPEVYFY---GEDFIRMEYIDGRP   98 (201)
T ss_pred             hhhhhhhcccccEEEEeecc-CceEEEEEecCCc--chhhHHHHHHHHHHhhhcCCCceEEEe---chhhhhhhhhcCcc
Confidence            35667999999999999986 5588999765443  346689999999988876665433222   23356699999988


Q ss_pred             hhHHhh
Q 017984          352 LLDNLF  357 (363)
Q Consensus       352 L~~~l~  357 (363)
                      |.+.-.
T Consensus        99 L~~~~~  104 (201)
T COG2112          99 LGKLEI  104 (201)
T ss_pred             hhhhhh
Confidence            876543

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=96.12  E-value=0.0016  Score=58.41  Aligned_cols=86  Identities=24%  Similarity=0.364  Sum_probs=62.2

Q ss_pred             CCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeC------Cee
Q 017984          270 YFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITG------PES  340 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~~  340 (363)
                      +|.....++.|.- .|-.+.. -.++.||+|.+...  .....++-.+|..++..++|+||++++.++...      .+.
T Consensus        18 Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~   96 (369)
T KOG0665|consen   18 RYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEV   96 (369)
T ss_pred             eeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhH
Confidence            4555666777655 3433332 23788999988542  233345678999999999999999999998764      368


Q ss_pred             EEEEEccCCCChhHHhh
Q 017984          341 LLVYEFVPNQSLLDNLF  357 (363)
Q Consensus       341 ~lv~Ey~~~gsL~~~l~  357 (363)
                      |+|||||.. +|.+.+.
T Consensus        97 y~v~e~m~~-nl~~vi~  112 (369)
T KOG0665|consen   97 YLVMELMDA-NLCQVIL  112 (369)
T ss_pred             HHHHHhhhh-HHHHHHH
Confidence            999999954 8888775

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=95.36  E-value=0.03  Score=53.90  Aligned_cols=77  Identities=27%  Similarity=0.353  Sum_probs=56.4

Q ss_pred             eEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEe----CCeeEEEEEccCC-CChhHHh
Q 017984          283 GSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSIT----GPESLLVYEFVPN-QSLLDNL  356 (363)
Q Consensus       283 g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lv~Ey~~~-gsL~~~l  356 (363)
                      .+-||+.. .||..+.+|++.-...+....-..-++.++++.|+|||+|..++.+    +..+.|||+|.|+ ++|.++-
T Consensus       290 ~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~~  369 (655)
T KOG3741|consen  290 ITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDLY  369 (655)
T ss_pred             ceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHHH
Confidence            46788875 5799999999943222222223455788999999999999998874    4578999999986 6777766


Q ss_pred             hcC
Q 017984          357 FDK  359 (363)
Q Consensus       357 ~~~  359 (363)
                      +.+
T Consensus       370 F~~  372 (655)
T KOG3741|consen  370 FAN  372 (655)
T ss_pred             ccC
Confidence            544

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=95.32  E-value=0.026  Score=55.42  Aligned_cols=82  Identities=17%  Similarity=0.184  Sum_probs=54.5

Q ss_pred             CceecccCceEEEEEEcCCCCEEEEEEeccCChhh------------------------------HH----------HHH
Q 017984          274 SNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQW------------------------------VD----------HFF  313 (363)
Q Consensus       274 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~------------------------------~~----------~~~  313 (363)
                      .+.|+.++.|+||++++++|+.||||+.++.-...                              .+          .|.
T Consensus       130 ~~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~  209 (517)
T COG0661         130 PEPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYR  209 (517)
T ss_pred             CCchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHH
Confidence            36899999999999999999999999986541110                              01          144


Q ss_pred             HHHHHHhcC----C-CCCccceeeEE-EeCCeeEEEEEccCCCChhHHh
Q 017984          314 NEVNLISGI----N-HKNLVKLLGCS-ITGPESLLVYEFVPNQSLLDNL  356 (363)
Q Consensus       314 ~E~~~l~~l----~-h~niv~l~~~~-~~~~~~~lv~Ey~~~gsL~~~l  356 (363)
                      +|..-+.++    + .++|. +=.++ +-.....|+|||++|-.+.+..
T Consensus       210 ~EA~n~~~~~~nf~~~~~v~-VP~V~we~t~~~VLtmE~i~Gi~i~d~~  257 (517)
T COG0661         210 REAANAERFRENFKDDPDVY-VPKVYWEYTTRRVLTMEWIDGIKISDIA  257 (517)
T ss_pred             HHHHHHHHHHHHcCCCCCeE-eceeehhccCCcEEEEEeeCCEecccHH
Confidence            555555443    2 33332 22333 3345678999999998887763

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=94.42  E-value=0.059  Score=53.38  Aligned_cols=64  Identities=20%  Similarity=0.154  Sum_probs=51.4

Q ss_pred             CCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEccCCCChhHHh
Q 017984          291 PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQSLLDNL  356 (363)
Q Consensus       291 ~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~~~gsL~~~l  356 (363)
                      .++.+|.|+..+.......+...+-++.|+.++||||++++..+...+.+|||+|-+.  -|..+|
T Consensus        35 ~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~l   98 (690)
T KOG1243|consen   35 ADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVL   98 (690)
T ss_pred             ccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHH
Confidence            4688899988876555445557788899999999999999999999999999999874  344444

>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []

Probab=94.31  E-value=0.021  Score=44.62  Aligned_cols=31  Identities=29%  Similarity=0.281  Sum_probs=28.1

Q ss_pred             CceecccCceEEEEEEcCCCCEEEEEEeccC
Q 017984          274 SNKLGQGGSGSVYKGTLPGGEAVAVKRLFYN  304 (363)
Q Consensus       274 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~  304 (363)
                      .+.|+.++.|.||+|++++|+.||||+.++.
T Consensus        16 ~~PlasASiaQVh~a~l~~g~~VaVKV~rP~   46 (119)
T PF03109_consen   16 PEPLASASIAQVHRARLKDGEEVAVKVQRPG   46 (119)
T ss_pred             cchhhheehhhheeeeecccchhhhhhcchH
Confidence            5689999999999999999999999998754

These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=94.16  E-value=0.0069  Score=59.12  Aligned_cols=84  Identities=26%  Similarity=0.260  Sum_probs=65.8

Q ss_pred             ecccCceEEEEEE----cCCCCEEEEEEeccCCh--hhHHHHHHHHHHHhcCC-CCCccceeeEEEeCCeeEEEEEccCC
Q 017984          277 LGQGGSGSVYKGT----LPGGEAVAVKRLFYNTT--QWVDHFFNEVNLISGIN-HKNLVKLLGCSITGPESLLVYEFVPN  349 (363)
Q Consensus       277 lg~G~~g~Vy~~~----~~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~Ey~~~  349 (363)
                      +|+|.||.|+.+.    ...|..+|+|.++....  ........|..++...+ ||.+|+++..+..+..++++++|..+
T Consensus         2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rg   81 (612)
T KOG0603|consen    2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRG   81 (612)
T ss_pred             CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhccc
Confidence            6899999998654    23477889998875321  11114566778888887 99999999999999999999999999


Q ss_pred             CChhHHhhcCC
Q 017984          350 QSLLDNLFDKM  360 (363)
Q Consensus       350 gsL~~~l~~~~  360 (363)
                      |+|...+.+..
T Consensus        82 g~lft~l~~~~   92 (612)
T KOG0603|consen   82 GDLFTRLSKEV   92 (612)
T ss_pred             chhhhccccCC
Confidence            99988877654

>PRK10593 hypothetical protein; Provisional

Probab=94.12  E-value=0.2  Score=45.81  Aligned_cols=80  Identities=9%  Similarity=-0.038  Sum_probs=57.6

Q ss_pred             CCcCceecccCceEEEEEEcCCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCC---CCccceeeEEEe---CCeeEEEE
Q 017984          271 FHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINH---KNLVKLLGCSIT---GPESLLVY  344 (363)
Q Consensus       271 ~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h---~niv~l~~~~~~---~~~~~lv~  344 (363)
                      ......|+.|..+.||+....+++ +.+|..+...  ....|.+|.+.|+.|..   -.+.++++.+..   .+..+|||
T Consensus        16 ~~~~~~i~~G~~~~vy~~~~~~~~-~~~k~~~~~~--~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVm   92 (297)
T PRK10593         16 LSRVECISEQPYAALWALYDSQGN-PMPLMARSFS--TPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLL   92 (297)
T ss_pred             hheeeecCCccceeEEEEEcCCCC-EEEEEecccc--cchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEE
Confidence            345667999999999998876564 5666643311  22468899999988853   357788877654   35689999


Q ss_pred             EccCCCChh
Q 017984          345 EFVPNQSLL  353 (363)
Q Consensus       345 Ey~~~gsL~  353 (363)
                      |+++++++.
T Consensus        93 E~i~G~~~~  101 (297)
T PRK10593         93 ERLRGVSVE  101 (297)
T ss_pred             eccCCEecC
Confidence            999998764

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=94.09  E-value=0.33  Score=41.57  Aligned_cols=89  Identities=19%  Similarity=0.228  Sum_probs=63.0

Q ss_pred             CCcCceecccCceEEEEEEcCCCCEEEEEEeccCC----------------hhhHHHHHHHHHHHhcCC------CCCcc
Q 017984          271 FHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNT----------------TQWVDHFFNEVNLISGIN------HKNLV  328 (363)
Q Consensus       271 ~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~----------------~~~~~~~~~E~~~l~~l~------h~niv  328 (363)
                      +.....||+|+.-.||....  .....||++....                .....++.+|+.-...+.      +.+|.
T Consensus         3 L~~~~~i~~G~~R~cy~HP~--dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~   80 (199)
T PF10707_consen    3 LSESDLIAQGGERDCYQHPD--DPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIP   80 (199)
T ss_pred             CCCCcccccCCCceEEECCC--CCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccc
Confidence            34567899999999997543  4456788886544                112345666665555444      88999


Q ss_pred             ceeeEEEeCCeeEEEEEccC------CCChhHHhhcCCC
Q 017984          329 KLLGCSITGPESLLVYEFVP------NQSLLDNLFDKML  361 (363)
Q Consensus       329 ~l~~~~~~~~~~~lv~Ey~~------~gsL~~~l~~~~~  361 (363)
                      +++|..++...+-+|+|.+.      .-+|.+++.+...
T Consensus        81 r~~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~~~  119 (199)
T PF10707_consen   81 RFYGFVETNLGLGLVVELIRDADGNISPTLEDYLKEGGL  119 (199)
T ss_pred             cEeEEEecCCceEEEEEEEECCCCCcCccHHHHHHcCCc
Confidence            99999999999999999873      3467788765543

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=93.15  E-value=0.18  Score=49.61  Aligned_cols=31  Identities=26%  Similarity=0.292  Sum_probs=27.2

Q ss_pred             CceecccCceEEEEEEcCCCCEEEEEEeccC
Q 017984          274 SNKLGQGGSGSVYKGTLPGGEAVAVKRLFYN  304 (363)
Q Consensus       274 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~  304 (363)
                      .+.|+.-+.|.||++++++|+.||||+-++.
T Consensus       166 ~~piaaASlaQVhrA~L~~G~~VaVKVQ~P~  196 (538)
T KOG1235|consen  166 EEPIAAASLAQVHRARLKNGEDVAVKVQHPG  196 (538)
T ss_pred             cchhhhcchhheEEEEecCCCEEEEEecCcC
Confidence            4579999999999999999999999987643

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=93.11  E-value=0.57  Score=44.66  Aligned_cols=84  Identities=18%  Similarity=0.186  Sum_probs=56.9

Q ss_pred             CceecccCceEEEEEEcCCC-CEEEEEEeccC-----C--hhhHHHHHHHHHHHhcCC---CCCccceeeEEEeCCeeEE
Q 017984          274 SNKLGQGGSGSVYKGTLPGG-EAVAVKRLFYN-----T--TQWVDHFFNEVNLISGIN---HKNLVKLLGCSITGPESLL  342 (363)
Q Consensus       274 ~~~lg~G~~g~Vy~~~~~~g-~~vavK~l~~~-----~--~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~l  342 (363)
                      .+.||.|-+..||+....+| +.+.||.-...     .  +...+++..|.+.|..+.   ..++.+++.+  +.+.-++
T Consensus        31 ~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~--D~~~~~l  108 (401)
T PRK09550         31 AREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY--DEELAVT  108 (401)
T ss_pred             eeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE--CCCCCEE
Confidence            34789999999999998776 48999985421     1  123456778888888762   2456666655  3355789


Q ss_pred             EEEccCCCC-hhHHhhcC
Q 017984          343 VYEFVPNQS-LLDNLFDK  359 (363)
Q Consensus       343 v~Ey~~~gs-L~~~l~~~  359 (363)
                      ||||+++.. |.+.|.+.
T Consensus       109 VME~L~~~~~lr~~Ll~g  126 (401)
T PRK09550        109 VMEDLSDHKILRKGLIDG  126 (401)
T ss_pred             EEecCCCccHHHHHHhcC
Confidence            999998754 44554443

>PLN02876 acyl-CoA dehydrogenase

Probab=93.05  E-value=0.27  Score=51.68  Aligned_cols=79  Identities=11%  Similarity=0.236  Sum_probs=56.4

Q ss_pred             CceecccCceEEEEEEcCCC---CEEEEEEeccCC-hhhHHHHHHHHHHHhcCC-CCCc--cceeeEEEeC---CeeEEE
Q 017984          274 SNKLGQGGSGSVYKGTLPGG---EAVAVKRLFYNT-TQWVDHFFNEVNLISGIN-HKNL--VKLLGCSITG---PESLLV  343 (363)
Q Consensus       274 ~~~lg~G~~g~Vy~~~~~~g---~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~-h~ni--v~l~~~~~~~---~~~~lv  343 (363)
                      ...++.|.+..+|+....++   ..+++|+..... ......+.+|.++|..+. |++|  .+++.++.+.   +..|+|
T Consensus        43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flV  122 (822)
T PLN02876         43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYI  122 (822)
T ss_pred             EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEE
Confidence            45688899999999876543   367777765432 123356889999999995 6665  6777776654   467999


Q ss_pred             EEccCCCCh
Q 017984          344 YEFVPNQSL  352 (363)
Q Consensus       344 ~Ey~~~gsL  352 (363)
                      |||++|..+
T Consensus       123 ME~v~G~~~  131 (822)
T PLN02876        123 MEYLEGRIF  131 (822)
T ss_pred             EEecCCccc
Confidence            999998654

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=92.77  E-value=0.35  Score=42.29  Aligned_cols=72  Identities=15%  Similarity=0.171  Sum_probs=52.1

Q ss_pred             ceecccCceEEEEEEcCCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCc--cceeeEEEeCCeeEEEEEccCCCC
Q 017984          275 NKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNL--VKLLGCSITGPESLLVYEFVPNQS  351 (363)
Q Consensus       275 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~ni--v~l~~~~~~~~~~~lv~Ey~~~gs  351 (363)
                      .+|++|.-+.||+..   +..+++|......  ......+|.+++..+..-.+  .+.+.+....+...+|||+++|.+
T Consensus         7 ~~i~~G~t~~~y~~~---~~~~VlR~~~~~~--~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~   80 (226)
T TIGR02172         7 TQTGEGGNGESYTHK---TGKWMLKLYNPGF--DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKR   80 (226)
T ss_pred             eeecCCCCcceeEec---CCCEEEEeCCCCC--CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCcc
Confidence            578999999999842   4457788776432  23446889999988754333  566677667777889999999863

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=92.71  E-value=0.44  Score=40.11  Aligned_cols=86  Identities=16%  Similarity=0.157  Sum_probs=58.6

Q ss_pred             cCceecccCceEEEEEEcCCCCEEEEEEe-ccC-------ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEE
Q 017984          273 ESNKLGQGGSGSVYKGTLPGGEAVAVKRL-FYN-------TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVY  344 (363)
Q Consensus       273 ~~~~lg~G~~g~Vy~~~~~~g~~vavK~l-~~~-------~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  344 (363)
                      ...+|-+|+-+.|+++.++ |+...||.= .+.       ..-..++-.+|++++.++.--.|..-.=++.+...-.|+|
T Consensus        11 ~l~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M   89 (229)
T KOG3087|consen   11 SLELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM   89 (229)
T ss_pred             cceeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence            4567889999999999986 666566632 221       1123456789999999886545444444555666667999


Q ss_pred             EccCC-CChhHHhhcC
Q 017984          345 EFVPN-QSLLDNLFDK  359 (363)
Q Consensus       345 Ey~~~-gsL~~~l~~~  359 (363)
                      ||+++ -++.+++...
T Consensus        90 E~~~g~~~vk~~i~~~  105 (229)
T KOG3087|consen   90 EFIDGASTVKDFILST  105 (229)
T ss_pred             EeccchhHHHHHHHHH
Confidence            99977 4777777643

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=92.68  E-value=0.46  Score=39.98  Aligned_cols=84  Identities=15%  Similarity=0.225  Sum_probs=57.5

Q ss_pred             ceecccCceEEEEEEcCCCCEEEEEE-eccC--Ch-----hhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEc
Q 017984          275 NKLGQGGSGSVYKGTLPGGEAVAVKR-LFYN--TT-----QWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       275 ~~lg~G~~g~Vy~~~~~~g~~vavK~-l~~~--~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      ..+.+|+=+.+|.+.+. |..+.+|. +++.  .+     -...+-.+|.+++.+++--.|..-.=+..+.....|+|||
T Consensus         2 ~~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~   80 (204)
T COG3642           2 DLIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY   80 (204)
T ss_pred             chhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence            35788988999998775 44455553 2221  11     1134568999999988655554444455667778899999


Q ss_pred             cCCCChhHHhhcC
Q 017984          347 VPNQSLLDNLFDK  359 (363)
Q Consensus       347 ~~~gsL~~~l~~~  359 (363)
                      ++|-.|.++|...
T Consensus        81 I~G~~lkd~l~~~   93 (204)
T COG3642          81 IEGELLKDALEEA   93 (204)
T ss_pred             eCChhHHHHHHhc
Confidence            9999999888765

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=92.44  E-value=0.45  Score=41.95  Aligned_cols=75  Identities=12%  Similarity=0.090  Sum_probs=52.2

Q ss_pred             ecccCc-eEEEEEEcCCCCEEEEEEeccCChhhHHHHHHHHHHHhcCC-CCCccceeeEEEeCCeeEEEEEccCCCChhH
Q 017984          277 LGQGGS-GSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGIN-HKNLVKLLGCSITGPESLLVYEFVPNQSLLD  354 (363)
Q Consensus       277 lg~G~~-g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~Ey~~~gsL~~  354 (363)
                      |..|.. ..||+.... +..+.+|+.....   ...+.+|++++..+. +--+.+++++....+..++|||+++|.+|..
T Consensus         6 ~~~g~~~~~v~~~~~~-~~~~~vk~~~~~~---~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~   81 (244)
T cd05150           6 VTEGQSGATVYRLDGK-NPGLYLKIAPSGP---TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAAA   81 (244)
T ss_pred             cCCCCCcCeEEEEcCC-CCcEEEEecCCCc---ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHhH
Confidence            444544 778998765 4678888775432   234678888888774 3335567776666667899999999988865


Q ss_pred             H
Q 017984          355 N  355 (363)
Q Consensus       355 ~  355 (363)
                      .
T Consensus        82 ~   82 (244)
T cd05150          82 L   82 (244)
T ss_pred             h
Confidence            4

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=92.38  E-value=0.44  Score=42.57  Aligned_cols=79  Identities=22%  Similarity=0.217  Sum_probs=57.6

Q ss_pred             CcCceecccCceEEEEEEcCCCCEEEEEEeccCCh----------------------hhHHHHHHHHHHHhcCCCC--Cc
Q 017984          272 HESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTT----------------------QWVDHFFNEVNLISGINHK--NL  327 (363)
Q Consensus       272 ~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~----------------------~~~~~~~~E~~~l~~l~h~--ni  327 (363)
                      ..+++||-|.=+.||.+..+.|.++|||.=+....                      -.+....+|.++|.+|...  .|
T Consensus        94 ~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~V  173 (304)
T COG0478          94 AIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVKV  173 (304)
T ss_pred             hhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCCC
Confidence            45689999999999999999999999996432100                      1123467899999999654  56


Q ss_pred             cceeeEEEeCCeeEEEEEccCCCChhH
Q 017984          328 VKLLGCSITGPESLLVYEFVPNQSLLD  354 (363)
Q Consensus       328 v~l~~~~~~~~~~~lv~Ey~~~gsL~~  354 (363)
                      .+.+++    +.-.+||||++|-.|..
T Consensus       174 P~P~~~----nRHaVvMe~ieG~eL~~  196 (304)
T COG0478         174 PKPIAW----NRHAVVMEYIEGVELYR  196 (304)
T ss_pred             CCcccc----ccceeeeehcccceeec
Confidence            665543    44579999998866654

>PF08693 SKG6: Transmembrane alpha-helix domain; InterPro: IPR014805 SKG6 and AXL2 are membrane proteins that show polarised intracellular localisation [, ]

Probab=92.21  E-value=0.12  Score=31.34  Aligned_cols=20  Identities=20%  Similarity=0.438  Sum_probs=9.9

Q ss_pred             hHHHHHHHHHHHHHhhhhhh
Q 017984          215 TSAVALLLVFSLVAFFVRRK  234 (363)
Q Consensus       215 ~~~~~~~l~~~~~~~~~~r~  234 (363)
                      ++++++++++++++++++||
T Consensus        19 VPV~vI~~vl~~~l~~~~rR   38 (40)
T PF08693_consen   19 VPVGVIIIVLGAFLFFWYRR   38 (40)
T ss_pred             echHHHHHHHHHHhheEEec
Confidence            44444444444455555554

This entry represents the highly conserved transmembrane alpha-helical domain found in these proteins [, ]. The full-length AXL2 protein has a negative regulatory function in cytokinesis [].

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=91.60  E-value=0.67  Score=40.00  Aligned_cols=77  Identities=18%  Similarity=0.246  Sum_probs=55.7

Q ss_pred             ceecccCceEEEEEEcCCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCC--CccceeeEEEe---CCeeEEEEEccCC
Q 017984          275 NKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHK--NLVKLLGCSIT---GPESLLVYEFVPN  349 (363)
Q Consensus       275 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~--niv~l~~~~~~---~~~~~lv~Ey~~~  349 (363)
                      +.|+.|..+.||+....+ ..+++|.....  .....+.+|..++..+...  .+.+++.....   ....+++||++++
T Consensus         3 ~~l~~G~~n~~~~v~~~~-~~~vlK~~~~~--~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~g   79 (239)
T PF01636_consen    3 RPLSGGFSNRVYRVTTDD-GRYVLKFYRPP--DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIPG   79 (239)
T ss_dssp             EEEEESSSSEEEEEEETT-SEEEEEEESSH--HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEESS
T ss_pred             ccCCCCCeeeEEEEEECC-cEEEEEEeCCC--CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEecc
Confidence            578899999999999876 58999987543  4456688899888887533  34566654332   3357899999999


Q ss_pred             CChhH
Q 017984          350 QSLLD  354 (363)
Q Consensus       350 gsL~~  354 (363)
                      ..+..
T Consensus        80 ~~~~~   84 (239)
T PF01636_consen   80 RPLDD   84 (239)
T ss_dssp             EEHHH
T ss_pred             ccccc
Confidence            88776

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=91.23  E-value=1  Score=38.47  Aligned_cols=74  Identities=11%  Similarity=0.102  Sum_probs=50.1

Q ss_pred             ceecccCceEEEEEEcCC-------CCEEEEEEeccC-------------C---------hhhHHHH----HHHHHHHhc
Q 017984          275 NKLGQGGSGSVYKGTLPG-------GEAVAVKRLFYN-------------T---------TQWVDHF----FNEVNLISG  321 (363)
Q Consensus       275 ~~lg~G~~g~Vy~~~~~~-------g~~vavK~l~~~-------------~---------~~~~~~~----~~E~~~l~~  321 (363)
                      ..||.|.=+.||.+...+       +..+|||+.+..             +         ......+    .+|.+.|.+
T Consensus         3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r   82 (197)
T cd05146           3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR   82 (197)
T ss_pred             CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence            468999999999998543       478999987521             0         0112223    389999998


Q ss_pred             CCC--CCccceeeEEEeCCeeEEEEEccCCCCh
Q 017984          322 INH--KNLVKLLGCSITGPESLLVYEFVPNQSL  352 (363)
Q Consensus       322 l~h--~niv~l~~~~~~~~~~~lv~Ey~~~gsL  352 (363)
                      +..  -++.+.+.+    ..-+|||||+.+..+
T Consensus        83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~  111 (197)
T cd05146          83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQV  111 (197)
T ss_pred             HHHcCCCCCeEEEe----cCCEEEEEEcCCCCc
Confidence            853  455566653    456899999976533

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=90.64  E-value=0.027  Score=58.71  Aligned_cols=89  Identities=20%  Similarity=0.190  Sum_probs=66.9

Q ss_pred             CCCcCceecccCceEEEEEEcCCCCEEEEEEeccCC-hhhHHHHHHHHHH--HhcCCCCCccceeeEEEeCCeeEEEEEc
Q 017984          270 YFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNT-TQWVDHFFNEVNL--ISGINHKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~-~~~~~~~~~E~~~--l~~l~h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      ++...+.||++.|=.|.+++.+.|. |+||++-..+ .-..+.|.++++-  ...++|||.+++.-.-......|||-+|
T Consensus        24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqy  102 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQY  102 (1431)
T ss_pred             ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHH
Confidence            5677888999999999999998787 8899986543 2233444444433  4455899999988777777788999999


Q ss_pred             cCCCChhHHhhcCC
Q 017984          347 VPNQSLLDNLFDKM  360 (363)
Q Consensus       347 ~~~gsL~~~l~~~~  360 (363)
                      +.+ +|.+.|.-++
T Consensus       103 vkh-nLyDRlSTRP  115 (1431)
T KOG1240|consen  103 VKH-NLYDRLSTRP  115 (1431)
T ss_pred             Hhh-hhhhhhccch
Confidence            965 8988876554

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=90.29  E-value=0.97  Score=38.31  Aligned_cols=66  Identities=23%  Similarity=0.257  Sum_probs=41.4

Q ss_pred             EEEEEEcCCCCEEEEEEeccCCh--------------------------hhHHHHHHHHHHHhcCCCC--CccceeeEEE
Q 017984          284 SVYKGTLPGGEAVAVKRLFYNTT--------------------------QWVDHFFNEVNLISGINHK--NLVKLLGCSI  335 (363)
Q Consensus       284 ~Vy~~~~~~g~~vavK~l~~~~~--------------------------~~~~~~~~E~~~l~~l~h~--niv~l~~~~~  335 (363)
                      .||.|..++|..+|||+.+....                          .......+|.+.|.++..-  ++.+++.+. 
T Consensus         1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~-   79 (188)
T PF01163_consen    1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN-   79 (188)
T ss_dssp             EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred             CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence            38999988899999998753200                          0123468999999999765  455665432 


Q ss_pred             eCCeeEEEEEccC--CCChh
Q 017984          336 TGPESLLVYEFVP--NQSLL  353 (363)
Q Consensus       336 ~~~~~~lv~Ey~~--~gsL~  353 (363)
                         .-.|||||++  |..|.
T Consensus        80 ---~~~ivME~I~~~G~~~~   96 (188)
T PF01163_consen   80 ---RNVIVMEYIGEDGVPLP   96 (188)
T ss_dssp             ---TTEEEEE--EETTEEGG
T ss_pred             ---CCEEEEEecCCCccchh
Confidence               3469999998  54443

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane

Probab=89.95  E-value=0.25  Score=38.41  Aligned_cols=23  Identities=17%  Similarity=0.398  Sum_probs=10.0

Q ss_pred             eehhHHHHHHHHHHHHHhhhhhh
Q 017984          212 ILATSAVALLLVFSLVAFFVRRK  234 (363)
Q Consensus       212 ii~~~~~~~~l~~~~~~~~~~r~  234 (363)
                      |+..+++++++++++++|+++|+
T Consensus        69 Ii~gv~aGvIg~Illi~y~irR~   91 (122)
T PF01102_consen   69 IIFGVMAGVIGIILLISYCIRRL   91 (122)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHH
Confidence            33333333444444445555444

Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.

>PF02439 Adeno_E3_CR2: Adenovirus E3 region protein CR2; InterPro: IPR003470 Early region 3 (E3) of human adenoviruses (Ads) codes for proteins that appear to control viral interactions with the host []

Probab=89.03  E-value=0.31  Score=29.05  Aligned_cols=23  Identities=9%  Similarity=0.212  Sum_probs=9.1

Q ss_pred             eeehhHHHHHHHHHHHHHhhhhh
Q 017984          211 VILATSAVALLLVFSLVAFFVRR  233 (363)
Q Consensus       211 iii~~~~~~~~l~~~~~~~~~~r  233 (363)
                      +|+++.++.+++++.++++.+.+
T Consensus         8 IIv~V~vg~~iiii~~~~YaCcy   30 (38)
T PF02439_consen    8 IIVAVVVGMAIIIICMFYYACCY   30 (38)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH
Confidence            33334333334444444443333

This region called CR1 (conserved region 1) [] is found three times in Human adenovirus 19 (a subgroup D adenovirus) 49 kDa protein in the E3 region. CR1 is also found in the 20.1 Kd protein of subgroup B adenoviruses. The function of this 80 amino acid region is unknown. This region is probably a divergent immunoglobulin domain.

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=88.88  E-value=0.1  Score=50.19  Aligned_cols=74  Identities=20%  Similarity=0.327  Sum_probs=58.1

Q ss_pred             HHHhccCCCcCceecccCceEEEEEEcCC-CCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeC
Q 017984          264 LEKATNYFHESNKLGQGGSGSVYKGTLPG-GEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITG  337 (363)
Q Consensus       264 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~-g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~  337 (363)
                      +..-.++|.....+|.|+||.|+.+.... +-.+|||+|... ......+..+|+..+.++.|++++++...|..+
T Consensus        44 ~sr~a~~~e~~~~~~~~g~~~~~~~~n~~d~~~~avkritlkn~e~s~~rvl~~~~s~a~feh~g~~~~~ha~~~~  119 (516)
T KOG1033|consen   44 TSREANDFEPGQCLGRGGFGVVFSAQNKADENKYAVKRITLKNREESRSRVLREVSSLAEFEHPGIKRYFHAWYER  119 (516)
T ss_pred             hhhhhccccccccccccCccccCCccccccchhhHHHHhcccchhhhhhhhhccccchhhhcccchhhheeceecC
Confidence            34445678889999999999999988643 458899999754 334456688999999999999999988776643

>PHA03265 envelope glycoprotein D; Provisional

Probab=88.23  E-value=0.77  Score=41.83  Aligned_cols=34  Identities=21%  Similarity=0.282  Sum_probs=21.4

Q ss_pred             ceeeehhHHHHHHHHHHHHHhhhhhhhhhhhHHh
Q 017984          209 LAVILATSAVALLLVFSLVAFFVRRKLLQKRRER  242 (363)
Q Consensus       209 ~~iii~~~~~~~~l~~~~~~~~~~r~~~~~~~~~  242 (363)
                      ..++|++++++++++.++++++|+||+..+++.+
T Consensus       350 ~g~~ig~~i~glv~vg~il~~~~rr~k~~~k~~~  383 (402)
T PHA03265        350 VGISVGLGIAGLVLVGVILYVCLRRKKELKKSAQ  383 (402)
T ss_pred             cceEEccchhhhhhhhHHHHHHhhhhhhhhhhhh
Confidence            5566666666677776677777776655554433

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=87.86  E-value=1  Score=38.63  Aligned_cols=82  Identities=26%  Similarity=0.408  Sum_probs=59.1

Q ss_pred             cCCCcCceecccCc-eEEEEEEcCCCCEEEEEEeccC---Ch------------------hhHHHHHHHHHHHhcCC---
Q 017984          269 NYFHESNKLGQGGS-GSVYKGTLPGGEAVAVKRLFYN---TT------------------QWVDHFFNEVNLISGIN---  323 (363)
Q Consensus       269 ~~~~~~~~lg~G~~-g~Vy~~~~~~g~~vavK~l~~~---~~------------------~~~~~~~~E~~~l~~l~---  323 (363)
                      .+++..+.||.|.. |.|||..+. |+.+|+|.....   ..                  .....|..|.+...+|+   
T Consensus        37 ~~I~flefLg~g~~~~~V~kv~I~-g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~~  115 (207)
T PF13095_consen   37 DDIEFLEFLGHGSHDGYVFKVEID-GRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEAG  115 (207)
T ss_pred             CcEeeeeecCCCCceeEEEEEEEC-CeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhcc
Confidence            67888899999999 999999985 779999994210   00                  11235899999998885   


Q ss_pred             CCCc--cceeeEEEeC------------------CeeEEEEEccCCCC
Q 017984          324 HKNL--VKLLGCSITG------------------PESLLVYEFVPNQS  351 (363)
Q Consensus       324 h~ni--v~l~~~~~~~------------------~~~~lv~Ey~~~gs  351 (363)
                      +.++  |+.+|+..-.                  ....||.||++...
T Consensus       116 ~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~  163 (207)
T PF13095_consen  116 REGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP  163 (207)
T ss_pred             ccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc
Confidence            4466  8999986321                  12367889887644

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=86.51  E-value=0.46  Score=46.39  Aligned_cols=87  Identities=22%  Similarity=0.167  Sum_probs=65.0

Q ss_pred             CCcCceecc--cCceEEEEEEc---CCCCEEEEEEecc--CChhhHHHHHHHHHHHhcCC-CCCccceeeEEEeCCeeEE
Q 017984          271 FHESNKLGQ--GGSGSVYKGTL---PGGEAVAVKRLFY--NTTQWVDHFFNEVNLISGIN-HKNLVKLLGCSITGPESLL  342 (363)
Q Consensus       271 ~~~~~~lg~--G~~g~Vy~~~~---~~g~~vavK~l~~--~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~l  342 (363)
                      +.....+|.  |.+|.+|.+..   .++..+|+|.-+.  ........=.+|.....+++ |+|.++....++..+.+++
T Consensus       116 ~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lfi  195 (524)
T KOG0601|consen  116 FPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILFI  195 (524)
T ss_pred             cccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCccee
Confidence            456677898  99999999886   4578899987432  22222223356777777774 9999999999999999999


Q ss_pred             EEEccCCCChhHHhhc
Q 017984          343 VYEFVPNQSLLDNLFD  358 (363)
Q Consensus       343 v~Ey~~~gsL~~~l~~  358 (363)
                      -+|++. .+|.++.+.
T Consensus       196 qtE~~~-~sl~~~~~~  210 (524)
T KOG0601|consen  196 QTELCG-ESLQSYCHT  210 (524)
T ss_pred             eecccc-chhHHhhhc
Confidence            999885 688777654

>PF15102 TMEM154: TMEM154 protein family

Probab=85.00  E-value=0.5  Score=37.66  Aligned_cols=10  Identities=10%  Similarity=0.198  Sum_probs=4.0

Q ss_pred             eeeehhHHHH
Q 017984          210 AVILATSAVA  219 (363)
Q Consensus       210 ~iii~~~~~~  219 (363)
                      +++|++++++
T Consensus        58 iLmIlIP~VL   67 (146)
T PF15102_consen   58 ILMILIPLVL   67 (146)
T ss_pred             EEEEeHHHHH
Confidence            3444444333

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=84.58  E-value=0.29  Score=49.34  Aligned_cols=87  Identities=18%  Similarity=0.226  Sum_probs=57.6

Q ss_pred             CcCceecccCceEEEEEEcC-CCCEEEEEEec----cC-Ch-hhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEE
Q 017984          272 HESNKLGQGGSGSVYKGTLP-GGEAVAVKRLF----YN-TT-QWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVY  344 (363)
Q Consensus       272 ~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~----~~-~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  344 (363)
                      ....++|.|.+|.|+..... .....+.|...    .. .. .....+..|..+-..++|||++..+....+....+-+|
T Consensus       321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m  400 (601)
T KOG0590|consen  321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM  400 (601)
T ss_pred             CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence            45678999999977766532 22223333221    11 11 11222667777788899999988887777766666669


Q ss_pred             EccCCCChhHHhhcC
Q 017984          345 EFVPNQSLLDNLFDK  359 (363)
Q Consensus       345 Ey~~~gsL~~~l~~~  359 (363)
                      ||+++ ||..++...
T Consensus       401 E~~~~-Dlf~~~~~~  414 (601)
T KOG0590|consen  401 EYCPY-DLFSLVMSN  414 (601)
T ss_pred             hcccH-HHHHHHhcc
Confidence            99999 999988765

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=84.37  E-value=0.85  Score=44.61  Aligned_cols=92  Identities=20%  Similarity=0.121  Sum_probs=67.1

Q ss_pred             HHhccCCCcCceecccCceEEEEEEc--CCCCEEEEEEeccCChhhHHH--HHHHHHHHhcC-CCCCccceeeEEEeCCe
Q 017984          265 EKATNYFHESNKLGQGGSGSVYKGTL--PGGEAVAVKRLFYNTTQWVDH--FFNEVNLISGI-NHKNLVKLLGCSITGPE  339 (363)
Q Consensus       265 ~~~~~~~~~~~~lg~G~~g~Vy~~~~--~~g~~vavK~l~~~~~~~~~~--~~~E~~~l~~l-~h~niv~l~~~~~~~~~  339 (363)
                      ...+.+|.+...||.+.|+.|++...  .++..+++|.+.........+  -..|+-+...+ .|.+++.....|.....
T Consensus       261 s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~  340 (524)
T KOG0601|consen  261 SCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQ  340 (524)
T ss_pred             eeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcccccc
Confidence            34456788999999999999998875  357789999886542222111  24555555555 58888988888888888


Q ss_pred             eEEEEEccCCCChhHHh
Q 017984          340 SLLVYEFVPNQSLLDNL  356 (363)
Q Consensus       340 ~~lv~Ey~~~gsL~~~l  356 (363)
                      .|+--||++++++...+
T Consensus       341 ~~ip~e~~~~~s~~l~~  357 (524)
T KOG0601|consen  341 GYIPLEFCEGGSSSLRS  357 (524)
T ss_pred             ccCchhhhcCcchhhhh
Confidence            88999999999876543

>PF02009 Rifin_STEVOR: Rifin/stevor family; InterPro: IPR002858 Malaria is still a major cause of mortality in many areas of the world

Probab=83.17  E-value=0.97  Score=41.09  Aligned_cols=25  Identities=16%  Similarity=0.465  Sum_probs=10.8

Q ss_pred             eeeehhHHHHHHHHHHHHHhhhhhh
Q 017984          210 AVILATSAVALLLVFSLVAFFVRRK  234 (363)
Q Consensus       210 ~iii~~~~~~~~l~~~~~~~~~~r~  234 (363)
                      .|+.+++++++++++++++++++|.
T Consensus       257 ~I~aSiiaIliIVLIMvIIYLILRY  281 (299)
T PF02009_consen  257 AIIASIIAILIIVLIMVIIYLILRY  281 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3344444444444444444444443

Plasmodium falciparum causes the most severe human form of the disease and is responsible for most fatalities. Severe cases of malaria can occur when the parasite invades and then proliferates within red blood cell erythrocytes. The parasite produces many variant antigenic proteins, encoded by multigene families, which are present on the surface of the infected erythrocyte and play important roles in virulence. A crucial survival mechanism for the malaria parasite is its ability to evade the immune response by switching these variant surface antigens. The high virulence of P. falciparum relative to other malarial parasites is in large part due to the fact that in this organism many of these surface antigens mediate the binding of infected erythrocytes to the vascular endothelium (cytoadherence) and non-infected erythrocytes (rosetting). This can lead to the accumulation of infected cells in the vasculature of a variety of organs, blocking the blood flow and reducing the oxygen supply. Clinical symptoms of severe infection can include fever, progressive anaemia, multi-organ dysfunction and coma. For more information see []. Several multicopy gene families have been described in Plasmodium falciparum, including the stevor family of subtelomeric open reading frames and the rif interspersed repetitive elements. Both families contain three predicted transmembrane segments. It has been proposed that stevor and rif are members of a larger superfamily that code for variant surface antigens [].

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=81.44  E-value=6.8  Score=35.63  Aligned_cols=75  Identities=16%  Similarity=0.172  Sum_probs=46.8

Q ss_pred             CcCceecccCceEEEEEEcCCCCEEEEEEeccCChhhHHHHHHHHHHHhcCC---CCCccceeeEEEeCCeeEEEEEccC
Q 017984          272 HESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGIN---HKNLVKLLGCSITGPESLLVYEFVP  348 (363)
Q Consensus       272 ~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lv~Ey~~  348 (363)
                      ...+.|+-|....+|+.. .+++.+-||.-..   .....|..|.+-|+.|.   --.+.+.+++....+.-+|||||++
T Consensus        20 ~~~~~v~GG~i~~a~~~~-~~~~~~FvK~~~~---~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle~l~   95 (288)
T PF03881_consen   20 TSIEPVSGGDINEAYRLD-TDGGSYFVKVNSE---SGRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLEFLE   95 (288)
T ss_dssp             -EEEEE--SSSSEEEEEE-TTS-EEEEEEEEG---GGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE---
T ss_pred             eeeEecCCCChhheEEEE-CCCccEEEEecCh---hhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEEeec
Confidence            345678888899999887 4577888998762   22345788888777773   3457788888877777899999998


Q ss_pred             CC
Q 017984          349 NQ  350 (363)
Q Consensus       349 ~g  350 (363)
                      .+
T Consensus        96 ~~   97 (288)
T PF03881_consen   96 MG   97 (288)
T ss_dssp             --
T ss_pred             CC
Confidence            76

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

>PF15050 SCIMP: SCIMP protein

Probab=80.87  E-value=1.1  Score=34.04  Aligned_cols=28  Identities=29%  Similarity=0.434  Sum_probs=16.5

Q ss_pred             ceeeehhHHHHHHHHHHHHHhhhhhhhh
Q 017984          209 LAVILATSAVALLLVFSLVAFFVRRKLL  236 (363)
Q Consensus       209 ~~iii~~~~~~~~l~~~~~~~~~~r~~~  236 (363)
                      .+||++++++++.+.+.+++||+.|+..
T Consensus         8 FWiiLAVaII~vS~~lglIlyCvcR~~l   35 (133)
T PF15050_consen    8 FWIILAVAIILVSVVLGLILYCVCRWQL   35 (133)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4566666666665556666666555433

>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=80.78  E-value=5.3  Score=35.06  Aligned_cols=76  Identities=18%  Similarity=0.262  Sum_probs=49.9

Q ss_pred             CceecccCceEEEEEEcCCCCEEEEEEeccCChhhHHHHHHHHHHHhcC---CCCCccceeeEEEeCCeeEEEEEccCCC
Q 017984          274 SNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGI---NHKNLVKLLGCSITGPESLLVYEFVPNQ  350 (363)
Q Consensus       274 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~~~lv~Ey~~~g  350 (363)
                      .+.+.-|..-.-|+... +..++-||+=   .......|..|+.-|..|   +--++.+.+.+-....+.|||+||++-|
T Consensus        21 r~~v~gG~inea~~v~d-g~~~~FvK~n---~~~~~~~f~AEa~gL~~la~s~ti~VP~vi~~G~~~~~sylVle~L~~~   96 (286)
T COG3001          21 REEVSGGDINEAWRLRD-GTDPFFVKCN---QREQLSMFTAEADGLELLARSNTITVPKVIAVGASRDHSYLVLEYLPTG   96 (286)
T ss_pred             ccccCCccccceeEeec-CCcceEEEec---chhhHHHHHHHHHHHHHHHhcCCccccceEEecCCCCeeEEEEeeccCC
Confidence            33444444444454433 2456777753   344456688888666655   3456778888888889999999999987


Q ss_pred             Chh
Q 017984          351 SLL  353 (363)
Q Consensus       351 sL~  353 (363)
                      .+.
T Consensus        97 ~~d   99 (286)
T COG3001          97 PLD   99 (286)
T ss_pred             CCC
Confidence            765

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=80.05  E-value=4.9  Score=34.96  Aligned_cols=75  Identities=21%  Similarity=0.242  Sum_probs=47.3

Q ss_pred             ceecccCceEEEEEEcCC--CCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCcc-ceeeEEEeCCeeEEEEEccCCCC
Q 017984          275 NKLGQGGSGSVYKGTLPG--GEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLV-KLLGCSITGPESLLVYEFVPNQS  351 (363)
Q Consensus       275 ~~lg~G~~g~Vy~~~~~~--g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv-~l~~~~~~~~~~~lv~Ey~~~gs  351 (363)
                      +.|..|-...+|+....+  +..+.+|+....... ...-.+|+.++..+...+++ ++++...    -.+||||++|.+
T Consensus         4 ~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~-~~d~~~E~~~~~~l~~~gl~P~v~~~~~----~~~l~e~i~G~~   78 (235)
T cd05157           4 KRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTEL-IIDRERELRIHKLLSKHGLAPKLYATFQ----NGLIYEFIPGRT   78 (235)
T ss_pred             EEcCCcccceEEEEEcCCCCCCeEEEEEccCCccc-eecHHHHHHHHHHHHhCCCCCeEEEEeC----CcEEEEeeCCCc
Confidence            456677778999988764  567888876543221 11234788888887543343 4433322    248999999977


Q ss_pred             hhH
Q 017984          352 LLD  354 (363)
Q Consensus       352 L~~  354 (363)
                      |..
T Consensus        79 l~~   81 (235)
T cd05157          79 LEP   81 (235)
T ss_pred             CCH
Confidence            743

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	363
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		6e-13
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		3e-12
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		2e-11
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		2e-11
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		2e-11
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		3e-10
4hzs_A	341	Crystal Structure Of Ack1 Kinase Domain With C-term		8e-07
1u46_A	291	Crystal Structure Of The Unphosphorylated Kinase Do		8e-07
1u54_A	291	Crystal Structures Of The Phosphorylated And Unphos		9e-07
3eqp_B	276	Crystal Structure Of Ack1 With Compound T95 Length		9e-07
4hzr_A	277	Crystal Structure Of Ack1 Kinase Domain Length = 27		9e-07
4ewh_B	275	Co-Crystal Structure Of Ack1 With Inhibitor Length		9e-07
4id7_A	273	Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-		9e-07
3gvu_A	292	The Crystal Structure Of Human Abl2 In Complex With		1e-06
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		2e-06
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		2e-06
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		2e-06
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		2e-06
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		2e-06
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		2e-06
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		2e-06
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		2e-06
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		2e-06
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		2e-06
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		2e-06
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		3e-06
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		3e-06
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		3e-06
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		3e-06
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		3e-06
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		3e-06
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		3e-06
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		3e-06
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		3e-06
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		3e-06
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		3e-06
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		3e-06
4f1m_A	287	Crystal Structure Of The G1179s Roco4 Kinase Domain		5e-06
4f1o_A	287	Crystal Structure Of The L1180t Mutant Roco4 Kinase		6e-06
4f0f_A	287	Crystal Structure Of The Roco4 Kinase Domain Bound		6e-06
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		6e-06
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		7e-06
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		8e-06
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		7e-05
3bbt_B	328	Crystal Structure Of The Erbb4 Kinase In Complex Wi		1e-04
2r4b_A	321	Erbb4 Kinase Domain Complexed With A Thienopyrimidi		1e-04
2xa4_A	298	Inhibitors Of Jak2 Kinase Domain Length = 298		1e-04
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		1e-04
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		1e-04
4e4m_A	302	Jak2 Kinase (Jh1 Domain) In Complex With Compound 3		1e-04
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		1e-04
4aqc_A	301	Triazolopyridine-Based Inhibitor Of Janus Kinase 2		1e-04
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		1e-04
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		1e-04
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		1e-04
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		1e-04
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		1e-04
3rvg_A	303	Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido		1e-04
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		1e-04
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		1e-04
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		1e-04
4hge_A	300	Jak2 Kinase (Jh1 Domain) In Complex With Compound 8		1e-04
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		1e-04
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		2e-04
3e62_A	293	Fragment Based Discovery Of Jak-2 Inhibitors Length		2e-04
2w1i_A	326	Structure Determination Of Aurora Kinase In Complex		2e-04
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		2e-04
4bbe_A	298	Aminoalkylpyrimidine Inhibitor Complexes With Jak2		2e-04
3tjc_A	298	Co-Crystal Structure Of Jak2 With Thienopyridine 8		2e-04
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		2e-04
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		2e-04
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		2e-04
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		2e-04
1qpd_A	279	Structural Analysis Of The Lymphocyte-specific Kina		2e-04
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		2e-04
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		2e-04
2b7a_A	293	The Structural Basis Of Janus Kinase 2 Inhibition B		2e-04
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		2e-04
3q32_A	301	Structure Of Janus Kinase 2 With A Pyrrolotriazine		2e-04
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		2e-04
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		2e-04
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		2e-04
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		2e-04
3ugc_A	295	Structural Basis Of Jak2 Inhibition By The Type Ii		2e-04
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		2e-04
3lpb_A	295	Crystal Structure Of Jak2 Complexed With A Potent 2		2e-04
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		2e-04
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		2e-04
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		2e-04
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		2e-04
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		2e-04
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		2e-04
3jy9_A	311	Janus Kinase 2 Inhibitors Length = 311		2e-04
3io7_A	313	2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel		2e-04
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		2e-04
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		2e-04
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		2e-04
4e6d_A	298	Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W		2e-04
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		3e-04
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		3e-04
2zv7_A	279	Lyn Tyrosine Kinase Domain, Apo Form Length = 279		3e-04
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		3e-04
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		3e-04
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		3e-04
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		3e-04
3geq_A	286	Structural Basis For The Chemical Rescue Of Src Kin		3e-04
4fie_A	423	Full-Length Human Pak4 Length = 423		3e-04
3og7_A	289	B-Raf Kinase V600e Oncogenic Mutant In Complex With		4e-04
1yi6_A	276	C-Term Tail Segment Of Human Tyrosine Kinase (258-5		4e-04
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		5e-04
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		5e-04
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		5e-04
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		5e-04
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		5e-04
3svv_A	286	Crystal Structure Of T338c C-Src Covalently Bound T		5e-04
3bys_A	277	Co-Crystal Structure Of Lck And Aminopyrimidine Ami		5e-04
2ofv_A	277	Crystal Structure Of Aminoquinazoline 1 Bound To Lc		5e-04
2of2_A	271	Crystal Structure Of Furanopyrimidine 8 Bound To Lc		5e-04
1uwh_A	276	The Complex Of Wild Type B-Raf And Bay439006 Length		5e-04
3bym_A	272	X-Ray Co-Crystal Structure Aminobenzimidazole Triaz		5e-04
3lck_A	271	The Kinase Domain Of Human Lymphocyte Kinase (Lck),		5e-04
2og8_A	265	Crystal Structure Of Aminoquinazoline 36 Bound To L		5e-04
1qpe_A	279	Structural Analysis Of The Lymphocyte-Specific Kina		6e-04
2zm1_A	285	Crystal Structure Of Imidazo Pyrazin 1 Bound To The		6e-04
2pl0_A	289	Lck Bound To Imatinib Length = 289		6e-04
2ofu_A	273	X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam		6e-04
3kmm_A	288	Structure Of Human Lck Kinase With A Small Molecule		6e-04
3kxz_A	287	The Complex Crystal Structure Of Lck With A Probe M		6e-04
3mpm_A	267	Lck Complexed With A Pyrazolopyrimidine Length = 26		6e-04
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		7e-04
3ii5_A	306	The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi		7e-04
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		7e-04
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		7e-04
3d4q_A	307	Pyrazole-Based Inhibitors Of B-Raf Kinase Length =		7e-04
3idp_A	300	B-Raf V600e Kinase Domain In Complex With An Aminoi		7e-04
4g9r_A	307	B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr		7e-04
3q96_A	282	B-Raf Kinase Domain In Complex With A Tetrahydronap		7e-04
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		7e-04
4dbn_A	284	Crystal Structure Of The Kinase Domain Of Human B-R		7e-04
1uwj_A	276	The Complex Of Mutant V599e B-raf And Bay439006 Len		8e-04
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		8e-04
1yoj_A	283	Crystal Structure Of Src Kinase Domain Length = 283		8e-04
4h58_A	275	Braf In Complex With Compound 3 Length = 275		8e-04
2fb8_A	281	Structure Of The B-Raf Kinase Domain Bound To Sb-59		8e-04
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		8e-04
1ksw_A	452	Structure Of Human C-Src Tyrosine Kinase (Thr338gly		9e-04

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score = 71.6 bits (174), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 43/96 (44%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
Query: 258 NFSYETLEKATNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVD-HFFNEV 316
            FS   L+ A++ F   N LG+GG G VYKG L  G  VAVKRL    TQ  +  F  EV
Sbjct: 19  RFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEV 78
Query: 317 NLISGINHKNLVKLLGCSITGPESLLVYEFVPNQSL 352
            +IS   H+NL++L G  +T  E LLVY ++ N S+
Sbjct: 79  EMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSV 114

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score = 69.3 bits (168), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 42/96 (43%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
Query: 258 NFSYETLEKATNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVD-HFFNEV 316
            FS   L+ A++ F   N LG+GG G VYKG L  G  VAVKRL     Q  +  F  EV
Sbjct: 27  RFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEV 86
Query: 317 NLISGINHKNLVKLLGCSITGPESLLVYEFVPNQSL 352
            +IS   H+NL++L G  +T  E LLVY ++ N S+
Sbjct: 87  EMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSV 122

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/109 (40%), Positives = 61/109 (55%), Gaps = 11/109 (10%)
Query: 258 NFSYETLEKATNYFHES------NKLGQGGSGSVYKGTLPGGEAVAVKRLF----YNTTQ 307
           +FS+  L+  TN F E       NK+G+GG G VYKG +     VAVK+L       T +
Sbjct: 8   SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEE 66
Query: 308 WVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQSLLDNL 356
               F  E+ +++   H+NLV+LLG S  G +  LVY ++PN SLLD L
Sbjct: 67  LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL 115

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/109 (40%), Positives = 61/109 (55%), Gaps = 11/109 (10%)
Query: 258 NFSYETLEKATNYFHES------NKLGQGGSGSVYKGTLPGGEAVAVKRLF----YNTTQ 307
           +FS+  L+  TN F E       NK+G+GG G VYKG +     VAVK+L       T +
Sbjct: 14  SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEE 72
Query: 308 WVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQSLLDNL 356
               F  E+ +++   H+NLV+LLG S  G +  LVY ++PN SLLD L
Sbjct: 73  LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL 121

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/109 (40%), Positives = 61/109 (55%), Gaps = 11/109 (10%)
Query: 258 NFSYETLEKATNYFHES------NKLGQGGSGSVYKGTLPGGEAVAVKRLF----YNTTQ 307
           +FS+  L+  TN F E       NK+G+GG G VYKG +     VAVK+L       T +
Sbjct: 14  SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEE 72
Query: 308 WVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQSLLDNL 356
               F  E+ +++   H+NLV+LLG S  G +  LVY ++PN SLLD L
Sbjct: 73  LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL 121

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 44/109 (40%), Positives = 58/109 (53%), Gaps = 11/109 (10%)
Query: 258 NFSYETLEKATNYFHES------NKLGQGGSGSVYKGTLPGGEAVAVKRLF----YNTTQ 307
           +FS+  L+  TN F E       NK G+GG G VYKG +     VAVK+L       T +
Sbjct: 5   SFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEE 63
Query: 308 WVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQSLLDNL 356
               F  E+ + +   H+NLV+LLG S  G +  LVY + PN SLLD L
Sbjct: 64  LKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRL 112

>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3 Domain Length = 341

Iteration: 1
 Score = 51.2 bits (121), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 275 NKLGQGGSGSVYKGTL--PGGEAVAV-----KRLFYNTTQWVDHFFNEVNLISGINHKNL 327
            KLG G  G V +G    P G+ V+V     K    +  + +D F  EVN +  ++H+NL
Sbjct: 18  EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 328 VKLLGCSITGPESLLVYEFVPNQSLLDNL 356
           ++L G  +T P   +V E  P  SLLD L
Sbjct: 78  IRLYGVVLTPPMK-MVTELAPLGSLLDRL 105

>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of The Tyrosine Kinase Ack1 Length = 291

Iteration: 1
 Score = 51.2 bits (121), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 275 NKLGQGGSGSVYKGTL--PGGEAVAV-----KRLFYNTTQWVDHFFNEVNLISGINHKNL 327
            KLG G  G V +G    P G+ V+V     K    +  + +D F  EVN +  ++H+NL
Sbjct: 24  EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 328 VKLLGCSITGPESLLVYEFVPNQSLLDNL 356
           ++L G  +T P   +V E  P  SLLD L
Sbjct: 84  IRLYGVVLTPPMK-MVTELAPLGSLLDRL 111

>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And Unphosphorylated Kinase Domains Of The Cdc42-Associated Tyrosine Kinase Ack1 Bound To Amp-Pcp Length = 291

Iteration: 1
 Score = 51.2 bits (121), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 275 NKLGQGGSGSVYKGTL--PGGEAVAV-----KRLFYNTTQWVDHFFNEVNLISGINHKNL 327
            KLG G  G V +G    P G+ V+V     K    +  + +D F  EVN +  ++H+NL
Sbjct: 24  EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 328 VKLLGCSITGPESLLVYEFVPNQSLLDNL 356
           ++L G  +T P   +V E  P  SLLD L
Sbjct: 84  IRLYGVVLTPPMK-MVTELAPLGSLLDRL 111

>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95 Length = 276

Iteration: 1
 Score = 51.2 bits (121), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 275 NKLGQGGSGSVYKGTL--PGGEAVAV-----KRLFYNTTQWVDHFFNEVNLISGINHKNL 327
            KLG G  G V +G    P G+ V+V     K    +  + +D F  EVN +  ++H+NL
Sbjct: 14  EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 328 VKLLGCSITGPESLLVYEFVPNQSLLDNL 356
           ++L G  +T P   +V E  P  SLLD L
Sbjct: 74  IRLYGVVLTPPMK-MVTELAPLGSLLDRL 101

>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain Length = 277

Iteration: 1
 Score = 51.2 bits (121), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 275 NKLGQGGSGSVYKGTL--PGGEAVAV-----KRLFYNTTQWVDHFFNEVNLISGINHKNL 327
            KLG G  G V +G    P G+ V+V     K    +  + +D F  EVN +  ++H+NL
Sbjct: 18  EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 328 VKLLGCSITGPESLLVYEFVPNQSLLDNL 356
           ++L G  +T P   +V E  P  SLLD L
Sbjct: 78  IRLYGVVLTPPMK-MVTELAPLGSLLDRL 105

>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor Length = 275

Iteration: 1
 Score = 51.2 bits (121), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 275 NKLGQGGSGSVYKGTL--PGGEAVAV-----KRLFYNTTQWVDHFFNEVNLISGINHKNL 327
            KLG G  G V +G    P G+ V+V     K    +  + +D F  EVN +  ++H+NL
Sbjct: 14  EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 328 VKLLGCSITGPESLLVYEFVPNQSLLDNL 356
           ++L G  +T P   +V E  P  SLLD L
Sbjct: 74  IRLYGVVLTPPMK-MVTELAPLGSLLDRL 101

>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-amino-1-(4- Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol Length = 273

Iteration: 1
 Score = 51.2 bits (121), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 275 NKLGQGGSGSVYKGTL--PGGEAVAV-----KRLFYNTTQWVDHFFNEVNLISGINHKNL 327
            KLG G  G V +G    P G+ V+V     K    +  + +D F  EVN +  ++H+NL
Sbjct: 14  EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 328 VKLLGCSITGPESLLVYEFVPNQSLLDNL 356
           ++L G  +T P   +V E  P  SLLD L
Sbjct: 74  IRLYGVVLTPPMK-MVTELAPLGSLLDRL 101

>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/83 (39%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 275 NKLGQGGSGSVYKGTLPG-GEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGC 333
           +KLG G  G VY G        VAVK L  +T + V+ F  E  ++  I H NLV+LLG 
Sbjct: 38  HKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 96
Query: 334 SITGPESLLVYEFVPNQSLLDNL 356
               P   +V E++P  +LLD L
Sbjct: 97  CTLEPPFYIVTEYMPYGNLLDYL 119

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Query: 251 AVNKSKLNFSYETLEKATNYFHESNKLGQGGSGSVYKGTLPG-GEAVAVKRLFYNTTQWV 309
           A++ S  N+    +E+        +KLG G  G VY+G        VAVK L  +T + V
Sbjct: 2   AMDPSSPNYDKWEMERTD--ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-V 58
Query: 310 DHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQSLLDNL 356
           + F  E  ++  I H NLV+LLG     P   ++ EF+   +LLD L
Sbjct: 59  EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 105

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Query: 251 AVNKSKLNFSYETLEKATNYFHESNKLGQGGSGSVYKGTLPG-GEAVAVKRLFYNTTQWV 309
           A++ S  N+    +E+        +KLG G  G VY+G        VAVK L  +T + V
Sbjct: 2   AMDPSSPNYDKWEMERTD--ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-V 58
Query: 310 DHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQSLLDNL 356
           + F  E  ++  I H NLV+LLG     P   ++ EF+   +LLD L
Sbjct: 59  EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 105

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Query: 251 AVNKSKLNFSYETLEKATNYFHESNKLGQGGSGSVYKGTLPG-GEAVAVKRLFYNTTQWV 309
           A++ S  N+    +E+        +KLG G  G VY+G        VAVK L  +T + V
Sbjct: 2   AMDPSSPNYDKWEMERTD--ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-V 58
Query: 310 DHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQSLLDNL 356
           + F  E  ++  I H NLV+LLG     P   ++ EF+   +LLD L
Sbjct: 59  EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 105

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 2/101 (1%)
Query: 257 LNFSYETLEKATNYFHESNKLGQGGSGSVYKGTLPG-GEAVAVKRLFYNTTQWVDHFFNE 315
           ++ +Y+  E         +KLG G  G VY+G        VAVK L  +T + V+ F  E
Sbjct: 3   MDPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKE 61
Query: 316 VNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQSLLDNL 356
             ++  I H NLV+LLG     P   ++ EF+   +LLD L
Sbjct: 62  AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 102

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 53/94 (56%)
Query: 264 LEKATNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGIN 323
           LE+ATN F     +G G  G VYKG L  G  VA+KR    ++Q ++ F  E+  +S   
Sbjct: 34  LEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCR 93
Query: 324 HKNLVKLLGCSITGPESLLVYEFVPNQSLLDNLF 357
           H +LV L+G      E +L+Y+++ N +L  +L+
Sbjct: 94  HPHLVSLIGFCDERNEMILIYKYMENGNLKRHLY 127

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 275 NKLGQGGSGSVYKGTLPG-GEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGC 333
           +KLG G  G VY+G        VAVK L  +T + V+ F  E  ++  I H NLV+LLG 
Sbjct: 17  HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 334 SITGPESLLVYEFVPNQSLLDNL 356
               P   ++ EF+   +LLD L
Sbjct: 76  CTREPPFYIIIEFMTYGNLLDYL 98

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
Query: 261 YETLEKATNYFHESNKLGQGGSGSVYKGTLPG-GEAVAVKRLFYNTTQWVDHFFNEVNLI 319
           Y+  E         +KLG G  G VY+G        VAVK L  +T + V+ F  E  ++
Sbjct: 5   YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVM 63
Query: 320 SGINHKNLVKLLGCSITGPESLLVYEFVPNQSLLDNL 356
             I H NLV+LLG     P   ++ EF+   +LLD L
Sbjct: 64  KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL 100

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
Query: 261 YETLEKATNYFHESNKLGQGGSGSVYKGTLPG-GEAVAVKRLFYNTTQWVDHFFNEVNLI 319
           Y+  E         +KLG G  G VY+G        VAVK L  +T + V+ F  E  ++
Sbjct: 5   YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVM 63
Query: 320 SGINHKNLVKLLGCSITGPESLLVYEFVPNQSLLDNL 356
             I H NLV+LLG     P   ++ EF+   +LLD L
Sbjct: 64  KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL 100

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 53/94 (56%)
Query: 264 LEKATNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGIN 323
           LE+ATN F     +G G  G VYKG L  G  VA+KR    ++Q ++ F  E+  +S   
Sbjct: 34  LEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCR 93
Query: 324 HKNLVKLLGCSITGPESLLVYEFVPNQSLLDNLF 357
           H +LV L+G      E +L+Y+++ N +L  +L+
Sbjct: 94  HPHLVSLIGFCDERNEMILIYKYMENGNLKRHLY 127

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
Query: 261 YETLEKATNYFHESNKLGQGGSGSVYKGTLPG-GEAVAVKRLFYNTTQWVDHFFNEVNLI 319
           Y+  E         +KLG G  G VY+G        VAVK L  +T + V+ F  E  ++
Sbjct: 10  YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVM 68
Query: 320 SGINHKNLVKLLGCSITGPESLLVYEFVPNQSLLDNL 356
             I H NLV+LLG     P   ++ EF+   +LLD L
Sbjct: 69  KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL 105

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
Query: 261 YETLEKATNYFHESNKLGQGGSGSVYKGTLPG-GEAVAVKRLFYNTTQWVDHFFNEVNLI 319
           Y+  E         +KLG G  G VY+G        VAVK L  +T + V+ F  E  ++
Sbjct: 6   YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVM 64
Query: 320 SGINHKNLVKLLGCSITGPESLLVYEFVPNQSLLDNL 356
             I H NLV+LLG     P   ++ EF+   +LLD L
Sbjct: 65  KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL 101

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
Query: 261 YETLEKATNYFHESNKLGQGGSGSVYKGTLPG-GEAVAVKRLFYNTTQWVDHFFNEVNLI 319
           Y+  E         +KLG G  G VY+G        VAVK L  +T + V+ F  E  ++
Sbjct: 5   YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVM 63
Query: 320 SGINHKNLVKLLGCSITGPESLLVYEFVPNQSLLDNL 356
             I H NLV+LLG     P   ++ EF+   +LLD L
Sbjct: 64  KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 100

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 2/101 (1%)
Query: 257 LNFSYETLEKATNYFHESNKLGQGGSGSVYKGTLPG-GEAVAVKRLFYNTTQWVDHFFNE 315
           ++ +Y+  E         +KLG G  G VY+G        VAVK L  +T + V+ F  E
Sbjct: 2   MSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKE 60
Query: 316 VNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQSLLDNL 356
             ++  I H NLV+LLG     P   ++ EF+   +LLD L
Sbjct: 61  AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 101

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
Query: 261 YETLEKATNYFHESNKLGQGGSGSVYKGTLPG-GEAVAVKRLFYNTTQWVDHFFNEVNLI 319
           Y+  E         +KLG G  G VY+G        VAVK L  +T + V+ F  E  ++
Sbjct: 9   YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVM 67
Query: 320 SGINHKNLVKLLGCSITGPESLLVYEFVPNQSLLDNL 356
             I H NLV+LLG     P   ++ EF+   +LLD L
Sbjct: 68  KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 104

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
Query: 261 YETLEKATNYFHESNKLGQGGSGSVYKGTLPG-GEAVAVKRLFYNTTQWVDHFFNEVNLI 319
           Y+  E         +KLG G  G VY+G        VAVK L  +T + V+ F  E  ++
Sbjct: 5   YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVM 63
Query: 320 SGINHKNLVKLLGCSITGPESLLVYEFVPNQSLLDNL 356
             I H NLV+LLG     P   ++ EF+   +LLD L
Sbjct: 64  KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 100

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
Query: 261 YETLEKATNYFHESNKLGQGGSGSVYKGTLPG-GEAVAVKRLFYNTTQWVDHFFNEVNLI 319
           Y+  E         +KLG G  G VY+G        VAVK L  +T + V+ F  E  ++
Sbjct: 5   YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVM 63
Query: 320 SGINHKNLVKLLGCSITGPESLLVYEFVPNQSLLDNL 356
             I H NLV+LLG     P   ++ EF+   +LLD L
Sbjct: 64  KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 100

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 2/101 (1%)
Query: 257 LNFSYETLEKATNYFHESNKLGQGGSGSVYKGTLPG-GEAVAVKRLFYNTTQWVDHFFNE 315
           ++ +Y+  E         +KLG G  G VY+G        VAVK L  +T + V+ F  E
Sbjct: 3   MSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKE 61
Query: 316 VNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQSLLDNL 356
             ++  I H NLV+LLG     P   ++ EF+   +LLD L
Sbjct: 62  AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 102

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 275 NKLGQGGSGSVYKGTLPG-GEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGC 333
           +KLG G  G VY+G        VAVK L  +T + V+ F  E  ++  I H NLV+LLG 
Sbjct: 24  HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 334 SITGPESLLVYEFVPNQSLLDNL 356
               P   ++ EF+   +LLD L
Sbjct: 83  CTREPPFYIITEFMTYGNLLDYL 105

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 275 NKLGQGGSGSVYKGTLPG-GEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGC 333
           +KLG G  G VY+G        VAVK L  +T + V+ F  E  ++  I H NLV+LLG 
Sbjct: 17  HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 334 SITGPESLLVYEFVPNQSLLDNL 356
               P   ++ EF+   +LLD L
Sbjct: 76  CTREPPFYIITEFMTYGNLLDYL 98

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 2/101 (1%)
Query: 257 LNFSYETLEKATNYFHESNKLGQGGSGSVYKGTLPG-GEAVAVKRLFYNTTQWVDHFFNE 315
           ++ +Y+  E         +KLG G  G VY+G        VAVK L  +T + V+ F  E
Sbjct: 3   MSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKE 61
Query: 316 VNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQSLLDNL 356
             ++  I H NLV+LLG     P   ++ EF+   +LLD L
Sbjct: 62  AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 102

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 275 NKLGQGGSGSVYKGTLPG-GEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGC 333
           +KLG G  G VY+G        VAVK L  +T + V+ F  E  ++  I H NLV+LLG 
Sbjct: 32  HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 90
Query: 334 SITGPESLLVYEFVPNQSLLDNL 356
               P   ++ EF+   +LLD L
Sbjct: 91  CTREPPFYIITEFMTYGNLLDYL 113

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 275 NKLGQGGSGSVYKGTLPG-GEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGC 333
           +KLG G  G VY+G        VAVK L  +T + V+ F  E  ++  I H NLV+LLG 
Sbjct: 19  HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 334 SITGPESLLVYEFVPNQSLLDNL 356
               P   ++ EF+   +LLD L
Sbjct: 78  CTREPPFYIITEFMTYGNLLDYL 100

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 275 NKLGQGGSGSVYKGTLPG-GEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGC 333
           +KLG G  G VY+G        VAVK L  +T + V+ F  E  ++  I H NLV+LLG 
Sbjct: 17  HKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 334 SITGPESLLVYEFVPNQSLLDNL 356
               P   ++ EF+   +LLD L
Sbjct: 76  CTREPPFYIITEFMTYGNLLDYL 98

>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 51/101 (50%), Gaps = 10/101 (9%)
Query: 267 ATNYFHESNKLGQGGSGSVYKGTLPGGEAV-AVKRLFYN----TTQWVD---HFFNEVNL 318
           A N      ++G+GG G V+KG L   ++V A+K L        T+ ++    F  EV +
Sbjct: 17  ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 319 ISGINHKNLVKLLGCSITGPESLLVYEFVPNQSLLDNLFDK 359
           +S +NH N+VKL G     P   +V EFVP   L   L DK
Sbjct: 77  MSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDK 115

>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 51/101 (50%), Gaps = 10/101 (9%)
Query: 267 ATNYFHESNKLGQGGSGSVYKGTLPGGEAV-AVKRLFYN----TTQWVD---HFFNEVNL 318
           A N      ++G+GG G V+KG L   ++V A+K L        T+ ++    F  EV +
Sbjct: 17  ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 319 ISGINHKNLVKLLGCSITGPESLLVYEFVPNQSLLDNLFDK 359
           +S +NH N+VKL G     P   +V EFVP   L   L DK
Sbjct: 77  MSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDK 115

>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 51/101 (50%), Gaps = 10/101 (9%)
Query: 267 ATNYFHESNKLGQGGSGSVYKGTLPGGEAV-AVKRLFYN----TTQWVD---HFFNEVNL 318
           A N      ++G+GG G V+KG L   ++V A+K L        T+ ++    F  EV +
Sbjct: 17  ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 319 ISGINHKNLVKLLGCSITGPESLLVYEFVPNQSLLDNLFDK 359
           +S +NH N+VKL G     P   +V EFVP   L   L DK
Sbjct: 77  MSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDK 115

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 275 NKLGQGGSGSVYKGTLPG-GEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGC 333
           +KLG G  G VY+G        VAVK L  +T + V+ F  E  ++  I H NLV+LLG 
Sbjct: 226 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 284
Query: 334 SITGPESLLVYEFVPNQSLLDNL 356
               P   ++ EF+   +LLD L
Sbjct: 285 CTREPPFYIITEFMTYGNLLDYL 307

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 275 NKLGQGGSGSVYKGTLPG-GEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGC 333
           +KLG G  G VY+G        VAVK L  +T + V+ F  E  ++  I H NLV+LLG 
Sbjct: 265 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 323
Query: 334 SITGPESLLVYEFVPNQSLLDNL 356
               P   ++ EF+   +LLD L
Sbjct: 324 CTREPPFYIITEFMTYGNLLDYL 346

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 50/87 (57%), Gaps = 4/87 (4%)
Query: 271 FHESNKLGQGGSGSVYKG-TLPGGEAVAVKRLFYNT-TQWVDHF-FNEVNLISGINHKNL 327
           F +  K+G+G  G VYK      GE VA+K++  +T T+ V      E++L+  +NH N+
Sbjct: 5   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 328 VKLLGCSITGPESLLVYEFVPNQSLLD 354
           VKLL    T  +  LV+EF+ +Q L D
Sbjct: 65  VKLLDVIHTENKLYLVFEFL-HQDLKD 90

>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 57/110 (51%), Gaps = 13/110 (11%)
Query: 251 AVNKSKLNFSYETLEKATNYFHESNKLGQGGSGSVYKGT-LPGGE----AVAVKRLFYNT 305
           A N+++L    ET  K          LG G  G+VYKG  +P GE     VA+K L   T
Sbjct: 3   APNQAQLRILKETELKRVKV------LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT 56
Query: 306 TQWVD-HFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQSLLD 354
               +  F +E  +++ ++H +LV+LLG  ++ P   LV + +P+  LL+
Sbjct: 57  GPKANVEFMDEALIMASMDHPHLVRLLGVCLS-PTIQLVTQLMPHGCLLE 105

>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 57/110 (51%), Gaps = 13/110 (11%)
Query: 251 AVNKSKLNFSYETLEKATNYFHESNKLGQGGSGSVYKGT-LPGGE----AVAVKRLFYNT 305
           A N+++L    ET  K          LG G  G+VYKG  +P GE     VA+K L   T
Sbjct: 26  APNQAQLRILKETELKRVKV------LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT 79
Query: 306 TQWVD-HFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQSLLD 354
               +  F +E  +++ ++H +LV+LLG  ++ P   LV + +P+  LL+
Sbjct: 80  GPKANVEFMDEALIMASMDHPHLVRLLGVCLS-PTIQLVTQLMPHGCLLE 128

>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 275 NKLGQGGSGSV----YKGTLPG-GEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVK 329
            +LG+G  GSV    Y       GE VAVK+L ++T + +  F  E+ ++  + H N+VK
Sbjct: 19  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 330 LLG-CSITGPESL-LVYEFVPNQSLLDNL 356
             G C   G  +L L+ E++P  SL D L
Sbjct: 79  YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 107

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 271 FHESNKLGQGGSGSVYKG-TLPGGEAVAVKRLFYNT-TQWVDHF-FNEVNLISGINHKNL 327
           F +  K+G+G  G VYK      GE VA+K++  +T T+ V      E++L+  +NH N+
Sbjct: 7   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 328 VKLLGCSITGPESLLVYEFV 347
           VKLL    T  +  LV+EF+
Sbjct: 67  VKLLDVIHTENKLYLVFEFL 86

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 271 FHESNKLGQGGSGSVYKGT-LPGGEAVAVKRLFYNT-TQWVDHF-FNEVNLISGINHKNL 327
           F +  K+G+G  G VYK      GE VA+K++  +T T+ V      E++L+  +NH N+
Sbjct: 4   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 328 VKLLGCSITGPESLLVYEFV 347
           VKLL    T  +  LV+EF+
Sbjct: 64  VKLLDVIHTENKLYLVFEFL 83

>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 275 NKLGQGGSGSV----YKGTLPG-GEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVK 329
            +LG+G  GSV    Y       GE VAVK+L ++T + +  F  E+ ++  + H N+VK
Sbjct: 23  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 82
Query: 330 LLG-CSITGPESL-LVYEFVPNQSLLDNL 356
             G C   G  +L L+ E++P  SL D L
Sbjct: 83  YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 111

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 276 KLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSI 335
           KLGQG  G V+ GT  G   VA+K L   T    + F  E  ++  I H+ LV+L     
Sbjct: 25  KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKIRHEKLVQLYAVVS 83
Query: 336 TGPESLLVYEFVPNQSLLDNLFDKM 360
             P   +V E++   SLLD L  +M
Sbjct: 84  EEP-IYIVTEYMSKGSLLDFLKGEM 107

>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 275 NKLGQGGSGSV----YKGTLPG-GEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVK 329
            +LG+G  GSV    Y       GE VAVK+L ++T + +  F  E+ ++  + H N+VK
Sbjct: 22  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 81
Query: 330 LLG-CSITGPESL-LVYEFVPNQSLLDNL 356
             G C   G  +L L+ E++P  SL D L
Sbjct: 82  YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 110

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 271 FHESNKLGQGGSGSVYKGT-LPGGEAVAVKRLFYNT-TQWVDHF-FNEVNLISGINHKNL 327
           F +  K+G+G  G VYK      GE VA+K++  +T T+ V      E++L+  +NH N+
Sbjct: 9   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 328 VKLLGCSITGPESLLVYEFV 347
           VKLL    T  +  LV+EF+
Sbjct: 69  VKLLDVIHTENKLYLVFEFL 88

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 271 FHESNKLGQGGSGSVYKG-TLPGGEAVAVKRLFYNT-TQWVDHF-FNEVNLISGINHKNL 327
           F +  K+G+G  G VYK      GE VA+K++  +T T+ V      E++L+  +NH N+
Sbjct: 5   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 328 VKLLGCSITGPESLLVYEFV 347
           VKLL    T  +  LV+EF+
Sbjct: 65  VKLLDVIHTENKLYLVFEFL 84

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 271 FHESNKLGQGGSGSVYKG-TLPGGEAVAVKRLFYNT-TQWVDHF-FNEVNLISGINHKNL 327
           F +  K+G+G  G VYK      GE VA+K++  +T T+ V      E++L+  +NH N+
Sbjct: 6   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 328 VKLLGCSITGPESLLVYEFV 347
           VKLL    T  +  LV+EF+
Sbjct: 66  VKLLDVIHTENKLYLVFEFL 85

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 271 FHESNKLGQGGSGSVYKG-TLPGGEAVAVKRLFYNT-TQWVDHF-FNEVNLISGINHKNL 327
           F +  K+G+G  G VYK      GE VA+K++  +T T+ V      E++L+  +NH N+
Sbjct: 5   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 328 VKLLGCSITGPESLLVYEFV 347
           VKLL    T  +  LV+EF+
Sbjct: 65  VKLLDVIHTENKLYLVFEFL 84

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 271 FHESNKLGQGGSGSVYKG-TLPGGEAVAVKRLFYNT-TQWVDHF-FNEVNLISGINHKNL 327
           F +  K+G+G  G VYK      GE VA+K++  +T T+ V      E++L+  +NH N+
Sbjct: 5   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 328 VKLLGCSITGPESLLVYEFV 347
           VKLL    T  +  LV+EF+
Sbjct: 65  VKLLDVIHTENKLYLVFEFL 84

>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 275 NKLGQGGSGSV----YKGTLPG-GEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVK 329
            +LG+G  GSV    Y       GE VAVK+L ++T + +  F  E+ ++  + H N+VK
Sbjct: 20  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 79
Query: 330 LLG-CSITGPESL-LVYEFVPNQSLLDNL 356
             G C   G  +L L+ E++P  SL D L
Sbjct: 80  YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 108

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 271 FHESNKLGQGGSGSVYKG-TLPGGEAVAVKRLFYNT-TQWVDHF-FNEVNLISGINHKNL 327
           F +  K+G+G  G VYK      GE VA+K++  +T T+ V      E++L+  +NH N+
Sbjct: 5   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 328 VKLLGCSITGPESLLVYEFV 347
           VKLL    T  +  LV+EF+
Sbjct: 65  VKLLDVIHTENKLYLVFEFL 84

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 271 FHESNKLGQGGSGSVYKG-TLPGGEAVAVKRLFYNT-TQWVDHF-FNEVNLISGINHKNL 327
           F +  K+G+G  G VYK      GE VA+K++  +T T+ V      E++L+  +NH N+
Sbjct: 5   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 328 VKLLGCSITGPESLLVYEFV 347
           VKLL    T  +  LV+EF+
Sbjct: 65  VKLLDVIHTENKLYLVFEFL 84

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 271 FHESNKLGQGGSGSVYKG-TLPGGEAVAVKRLFYNT-TQWVDHF-FNEVNLISGINHKNL 327
           F +  K+G+G  G VYK      GE VA+K++  +T T+ V      E++L+  +NH N+
Sbjct: 4   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 328 VKLLGCSITGPESLLVYEFV 347
           VKLL    T  +  LV+EF+
Sbjct: 64  VKLLDVIHTENKLYLVFEFL 83

>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 275 NKLGQGGSGSV----YKGTLPG-GEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVK 329
            +LG+G  GSV    Y       GE VAVK+L ++T + +  F  E+ ++  + H N+VK
Sbjct: 21  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 80
Query: 330 LLG-CSITGPESL-LVYEFVPNQSLLDNL 356
             G C   G  +L L+ E++P  SL D L
Sbjct: 81  YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 109

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 271 FHESNKLGQGGSGSVYKG-TLPGGEAVAVKRLFYNT-TQWVDHF-FNEVNLISGINHKNL 327
           F +  K+G+G  G VYK      GE VA+K++  +T T+ V      E++L+  +NH N+
Sbjct: 4   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 328 VKLLGCSITGPESLLVYEFV 347
           VKLL    T  +  LV+EF+
Sbjct: 64  VKLLDVIHTENKLYLVFEFL 83

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 271 FHESNKLGQGGSGSVYKG-TLPGGEAVAVKRLFYNT-TQWVDHF-FNEVNLISGINHKNL 327
           F +  K+G+G  G VYK      GE VA+K++  +T T+ V      E++L+  +NH N+
Sbjct: 8   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 328 VKLLGCSITGPESLLVYEFV 347
           VKLL    T  +  LV+EF+
Sbjct: 68  VKLLDVIHTENKLYLVFEFL 87

>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 275 NKLGQGGSGSV----YKGTLPG-GEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVK 329
            +LG+G  GSV    Y       GE VAVK+L ++T + +  F  E+ ++  + H N+VK
Sbjct: 15  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 74
Query: 330 LLG-CSITGPESL-LVYEFVPNQSLLDNL 356
             G C   G  +L L+ E++P  SL D L
Sbjct: 75  YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 103

>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 275 NKLGQGGSGSV----YKGTLPG-GEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVK 329
            +LG+G  GSV    Y       GE VAVK+L ++T + +  F  E+ ++  + H N+VK
Sbjct: 47  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 106
Query: 330 LLG-CSITGPESL-LVYEFVPNQSLLDNL 356
             G C   G  +L L+ E++P  SL D L
Sbjct: 107 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 135

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 271 FHESNKLGQGGSGSVYKGT-LPGGEAVAVKRLFYNT-TQWVDHF-FNEVNLISGINHKNL 327
           F +  K+G+G  G VYK      GE VA+K++  +T T+ V      E++L+  +NH N+
Sbjct: 8   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 328 VKLLGCSITGPESLLVYEFV 347
           VKLL    T  +  LV+EF+
Sbjct: 68  VKLLDVIHTENKLYLVFEFL 87

>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 275 NKLGQGGSGSV----YKGTLPG-GEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVK 329
            +LG+G  GSV    Y       GE VAVK+L ++T + +  F  E+ ++  + H N+VK
Sbjct: 17  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 76
Query: 330 LLG-CSITGPESL-LVYEFVPNQSLLDNL 356
             G C   G  +L L+ E++P  SL D L
Sbjct: 77  YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 105

>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 275 NKLGQGGSGSV----YKGTLPG-GEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVK 329
            +LG+G  GSV    Y       GE VAVK+L ++T + +  F  E+ ++  + H N+VK
Sbjct: 19  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 330 LLG-CSITGPESL-LVYEFVPNQSLLDNL 356
             G C   G  +L L+ E++P  SL D L
Sbjct: 79  YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 107

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 271 FHESNKLGQGGSGSVYKG-TLPGGEAVAVKRLFYNT-TQWVDHF-FNEVNLISGINHKNL 327
           F +  K+G+G  G VYK      GE VA+K++  +T T+ V      E++L+  +NH N+
Sbjct: 6   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 328 VKLLGCSITGPESLLVYEFV 347
           VKLL    T  +  LV+EF+
Sbjct: 66  VKLLDVIHTENKLYLVFEFL 85

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 271 FHESNKLGQGGSGSVYKGT-LPGGEAVAVKRLFYNT-TQWVDHF-FNEVNLISGINHKNL 327
           F +  K+G+G  G VYK      GE VA+K++  +T T+ V      E++L+  +NH N+
Sbjct: 6   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 328 VKLLGCSITGPESLLVYEFV 347
           VKLL    T  +  LV+EF+
Sbjct: 66  VKLLDVIHTENKLYLVFEFL 85

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 271 FHESNKLGQGGSGSVYKGT-LPGGEAVAVKRLFYNT-TQWVDHF-FNEVNLISGINHKNL 327
           F +  K+G+G  G VYK      GE VA+K++  +T T+ V      E++L+  +NH N+
Sbjct: 5   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 328 VKLLGCSITGPESLLVYEFV 347
           VKLL    T  +  LV+EF+
Sbjct: 65  VKLLDVIHTENKLYLVFEFL 84

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 271 FHESNKLGQGGSGSVYKG-TLPGGEAVAVKRLFYNT-TQWVDHF-FNEVNLISGINHKNL 327
           F +  K+G+G  G VYK      GE VA+K++  +T T+ V      E++L+  +NH N+
Sbjct: 5   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 328 VKLLGCSITGPESLLVYEFV 347
           VKLL    T  +  LV+EF+
Sbjct: 65  VKLLDVIHTENKLYLVFEFL 84

>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 275 NKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCS 334
            +LG G +G V+ G   G   VAVK L   +    D F  E NL+  + H+ LV+L    
Sbjct: 19  ERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMS-PDAFLAEANLMKQLQHQRLVRLYAV- 76
Query: 335 ITGPESLLVYEFVPNQSLLDNL 356
           +T     ++ E++ N SL+D L
Sbjct: 77  VTQEPIYIITEYMENGSLVDFL 98

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 271 FHESNKLGQGGSGSVYKGT-LPGGEAVAVKRLFYNT-TQWVDHF-FNEVNLISGINHKNL 327
           F +  K+G+G  G VYK      GE VA+K++  +T T+ V      E++L+  +NH N+
Sbjct: 7   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 328 VKLLGCSITGPESLLVYEFV 347
           VKLL    T  +  LV+EF+
Sbjct: 67  VKLLDVIHTENKLYLVFEFL 86

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 271 FHESNKLGQGGSGSVYKG-TLPGGEAVAVKRLFYNT-TQWVDHF-FNEVNLISGINHKNL 327
           F +  K+G+G  G VYK      GE VA+K++  +T T+ V      E++L+  +NH N+
Sbjct: 4   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 328 VKLLGCSITGPESLLVYEFV 347
           VKLL    T  +  LV+EF+
Sbjct: 64  VKLLDVIHTENKLYLVFEFL 83

>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 275 NKLGQGGSGSV----YKGTLPG-GEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVK 329
            +LG+G  GSV    Y       GE VAVK+L ++T + +  F  E+ ++  + H N+VK
Sbjct: 14  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 73
Query: 330 LLG-CSITGPESL-LVYEFVPNQSLLDNL 356
             G C   G  +L L+ E++P  SL D L
Sbjct: 74  YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 102

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 271 FHESNKLGQGGSGSVYKG-TLPGGEAVAVKRLFYNT-TQWVDHF-FNEVNLISGINHKNL 327
           F +  K+G+G  G VYK      GE VA+K++  +T T+ V      E++L+  +NH N+
Sbjct: 5   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 328 VKLLGCSITGPESLLVYEFV 347
           VKLL    T  +  LV+EF+
Sbjct: 65  VKLLDVIHTENKLYLVFEFL 84

>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 275 NKLGQGGSGSV----YKGTLPG-GEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVK 329
            +LG+G  GSV    Y       GE VAVK+L ++T + +  F  E+ ++  + H N+VK
Sbjct: 16  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 330 LLG-CSITGPESL-LVYEFVPNQSLLDNL 356
             G C   G  +L L+ E++P  SL D L
Sbjct: 76  YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 104

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 271 FHESNKLGQGGSGSVYKG-TLPGGEAVAVKRLFYNT-TQWVDHF-FNEVNLISGINHKNL 327
           F +  K+G+G  G VYK      GE VA+K++  +T T+ V      E++L+  +NH N+
Sbjct: 7   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 328 VKLLGCSITGPESLLVYEFV 347
           VKLL    T  +  LV+EF+
Sbjct: 67  VKLLDVIHTENKLYLVFEFL 86

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 271 FHESNKLGQGGSGSVYKGT-LPGGEAVAVKRLFYNT-TQWVDHF-FNEVNLISGINHKNL 327
           F +  K+G+G  G VYK      GE VA+K++  +T T+ V      E++L+  +NH N+
Sbjct: 6   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 328 VKLLGCSITGPESLLVYEFV 347
           VKLL    T  +  LV+EF+
Sbjct: 66  VKLLDVIHTENKLYLVFEFL 85

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 271 FHESNKLGQGGSGSVYKG-TLPGGEAVAVKRLFYNT-TQWVDHF-FNEVNLISGINHKNL 327
           F +  K+G+G  G VYK      GE VA+K++  +T T+ V      E++L+  +NH N+
Sbjct: 8   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 328 VKLLGCSITGPESLLVYEFV 347
           VKLL    T  +  LV+EF+
Sbjct: 68  VKLLDVIHTENKLYLVFEFL 87

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 271 FHESNKLGQGGSGSVYKG-TLPGGEAVAVKRLFYNT-TQWVDHF-FNEVNLISGINHKNL 327
           F +  K+G+G  G VYK      GE VA+K++  +T T+ V      E++L+  +NH N+
Sbjct: 7   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 328 VKLLGCSITGPESLLVYEFV 347
           VKLL    T  +  LV+EF+
Sbjct: 67  VKLLDVIHTENKLYLVFEFL 86

>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 275 NKLGQGGSGSV----YKGTLPG-GEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVK 329
            +LG+G  GSV    Y       GE VAVK+L ++T + +  F  E+ ++  + H N+VK
Sbjct: 16  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 330 LLG-CSITGPESL-LVYEFVPNQSLLDNL 356
             G C   G  +L L+ E++P  SL D L
Sbjct: 76  YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 104

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 271 FHESNKLGQGGSGSVYKGT-LPGGEAVAVKRLFYNT-TQWVDHF-FNEVNLISGINHKNL 327
           F +  K+G+G  G VYK      GE VA+K++  +T T+ V      E++L+  +NH N+
Sbjct: 9   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 328 VKLLGCSITGPESLLVYEFV 347
           VKLL    T  +  LV+EF+
Sbjct: 69  VKLLDVIHTENKLYLVFEFL 88

>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 275 NKLGQGGSGSV----YKGTLPG-GEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVK 329
            +LG+G  GSV    Y       GE VAVK+L ++T + +  F  E+ ++  + H N+VK
Sbjct: 16  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 330 LLG-CSITGPESL-LVYEFVPNQSLLDNL 356
             G C   G  +L L+ E++P  SL D L
Sbjct: 76  YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 104

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 269 NYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNL 327
           +Y     K+G+G +G V   T+   G+ VAVK++     Q  +  FNEV ++    H+N+
Sbjct: 20  SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 79
Query: 328 VKLLGCSITGPESLLVYEFVPNQSLLD 354
           V++    + G E  +V EF+   +L D
Sbjct: 80  VEMYNSYLVGDELWVVMEFLEGGALTD 106

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 271 FHESNKLGQGGSGSVYKGT-LPGGEAVAVKRLFYNT-TQWVDHF-FNEVNLISGINHKNL 327
           F +  K+G+G  G VYK      GE VA+K++  +T T+ V      E++L+  +NH N+
Sbjct: 12  FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 328 VKLLGCSITGPESLLVYEFV 347
           VKLL    T  +  LV+EF+
Sbjct: 72  VKLLDVIHTENKLYLVFEFL 91

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 271 FHESNKLGQGGSGSVYKG-TLPGGEAVAVKRLFYNT-TQWVDHF-FNEVNLISGINHKNL 327
           F +  K+G+G  G VYK      GE VA+K++  +T T+ V      E++L+  +NH N+
Sbjct: 8   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 328 VKLLGCSITGPESLLVYEFV 347
           VKLL    T  +  LV+EF+
Sbjct: 68  VKLLDVIHTENKLYLVFEFL 87

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 271 FHESNKLGQGGSGSVYKG-TLPGGEAVAVKRLFYNT-TQWVDHF-FNEVNLISGINHKNL 327
           F +  K+G+G  G VYK      GE VA+K++  +T T+ V      E++L+  +NH N+
Sbjct: 6   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 328 VKLLGCSITGPESLLVYEFV 347
           VKLL    T  +  LV+EF+
Sbjct: 66  VKLLDVIHTENKLYLVFEFL 85

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 271 FHESNKLGQGGSGSVYKG-TLPGGEAVAVKRLFYNT-TQWVDHF-FNEVNLISGINHKNL 327
           F +  K+G+G  G VYK      GE VA+K++  +T T+ V      E++L+  +NH N+
Sbjct: 8   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 328 VKLLGCSITGPESLLVYEFV 347
           VKLL    T  +  LV+EF+
Sbjct: 68  VKLLDVIHTENKLYLVFEFL 87

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 271 FHESNKLGQGGSGSVYKG-TLPGGEAVAVKRLFYNT-TQWVDHF-FNEVNLISGINHKNL 327
           F +  K+G+G  G VYK      GE VA+K++  +T T+ V      E++L+  +NH N+
Sbjct: 12  FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 328 VKLLGCSITGPESLLVYEFV 347
           VKLL    T  +  LV+EF+
Sbjct: 72  VKLLDVIHTENKLYLVFEFL 91

>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 7/88 (7%)
Query: 276 KLGQGGSGSV----YKGTLPG-GEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKL 330
           +LG+G  GSV    Y       GE VAVK+L ++T + +  F  E+ ++  + H N+VK 
Sbjct: 35  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 331 LG-CSITGPESL-LVYEFVPNQSLLDNL 356
            G C   G  +L L+ E++P  SL D L
Sbjct: 95  KGVCYSAGRRNLKLIMEYLPYGSLRDYL 122

>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 275 NKLGQGGSGSV----YKGTLPG-GEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVK 329
            +LG+G  GSV    Y       GE VAVK+L ++T + +  F  E+ ++  + H N+VK
Sbjct: 34  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 330 LLG-CSITGPESL-LVYEFVPNQSLLDNL 356
             G C   G  +L L+ E++P  SL D L
Sbjct: 94  YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 122

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 269 NYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNL 327
           +Y     K+G+G +G V   T+   G+ VAVK++     Q  +  FNEV ++    H+N+
Sbjct: 29  SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 88
Query: 328 VKLLGCSITGPESLLVYEFVPNQSLLD 354
           V++    + G E  +V EF+   +L D
Sbjct: 89  VEMYNSYLVGDELWVVMEFLEGGALTD 115

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 269 NYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNL 327
           +Y     K+G+G +G V   T+   G+ VAVK++     Q  +  FNEV ++    H+N+
Sbjct: 31  SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 90
Query: 328 VKLLGCSITGPESLLVYEFVPNQSLLD 354
           V++    + G E  +V EF+   +L D
Sbjct: 91  VEMYNSYLVGDELWVVMEFLEGGALTD 117

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 269 NYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNL 327
           +Y     K+G+G +G V   T+   G+ VAVK++     Q  +  FNEV ++    H+N+
Sbjct: 24  SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 83
Query: 328 VKLLGCSITGPESLLVYEFVPNQSLLD 354
           V++    + G E  +V EF+   +L D
Sbjct: 84  VEMYNSYLVGDELWVVMEFLEGGALTD 110

>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 7/88 (7%)
Query: 276 KLGQGGSGSV----YKGTLPG-GEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKL 330
           +LG+G  GSV    Y       GE VAVK+L ++T + +  F  E+ ++  + H N+VK 
Sbjct: 20  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 331 LG-CSITGPESL-LVYEFVPNQSLLDNL 356
            G C   G  +L L+ EF+P  SL + L
Sbjct: 80  KGVCYSAGRRNLKLIMEFLPYGSLREYL 107

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 276 KLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSI 335
           KLGQG  G V+ GT  G   VA+K L   T    + F  E  ++  + H+ LV+L     
Sbjct: 25  KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 336 TGPESLLVYEFVPNQSLLDNLFDKM 360
             P   +V E++   SLLD L  +M
Sbjct: 84  EEP-IYIVIEYMSKGSLLDFLKGEM 107

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 276 KLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSI 335
           KLGQG  G V+ GT  G   VA+K L   T    + F  E  ++  + H+ LV+L     
Sbjct: 25  KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 336 TGPESLLVYEFVPNQSLLDNLFDKM 360
             P   +V E++   SLLD L  +M
Sbjct: 84  EEP-IYIVIEYMSKGSLLDFLKGEM 107

>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Query: 275 NKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCS 334
            KLG G  G V+ G       VAVK L   T   V  F  E NL+  + H  LV+L    
Sbjct: 18  KKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMS-VQAFLEEANLMKTLQHDKLVRLYAVV 76
Query: 335 ITGPESLLVYEFVPNQSLLDNL 356
                  ++ EF+   SLLD L
Sbjct: 77  TKEEPIYIITEFMAKGSLLDFL 98

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 269 NYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNL 327
           +Y     K+G+G +G V   T+   G+ VAVK++     Q  +  FNEV ++    H+N+
Sbjct: 74  SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV 133
Query: 328 VKLLGCSITGPESLLVYEFVPNQSLLD 354
           V++    + G E  +V EF+   +L D
Sbjct: 134 VEMYNSYLVGDELWVVMEFLEGGALTD 160

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 276 KLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSI 335
           KLGQG  G V+ GT  G   VA+K L   T    + F  E  ++  + H+ LV+L     
Sbjct: 16  KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVVS 74
Query: 336 TGPESLLVYEFVPNQSLLDNLFDKM 360
             P   +V E++   SLLD L  +M
Sbjct: 75  EEP-IYIVTEYMSKGSLLDFLKGEM 98

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 276 KLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSI 335
           KLGQG  G V+ GT  G   VA+K L   T    + F  E  ++  + H+ LV+L     
Sbjct: 14  KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVVS 72
Query: 336 TGPESLLVYEFVPNQSLLDNLFDKM 360
             P   +V E++   SLLD L  +M
Sbjct: 73  EEP-IYIVTEYMSKGSLLDFLKGEM 96

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 276 KLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSI 335
           KLGQG  G V+ GT  G   VA+K L   T    + F  E  ++  + H+ LV+L     
Sbjct: 25  KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 336 TGPESLLVYEFVPNQSLLDNLFDKM 360
             P   +V E++   SLLD L  +M
Sbjct: 84  EEP-IYIVTEYMSKGSLLDFLKGEM 107

>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 276 KLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSI 335
           KLGQG  G V+ GT  G   VA+K L   T    + F  E  ++  + H+ LV+L     
Sbjct: 25  KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 336 TGPESLLVYEFVPNQSLLDNLFDKM 360
             P   +V E++   SLLD L  +M
Sbjct: 84  EEP-IYIVTEYMSKGSLLDFLKGEM 107

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 276 KLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCS 334
           K+G+G +G V   T+   G+ VAVK++     Q  +  FNEV ++    H+N+V++    
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 217
Query: 335 ITGPESLLVYEFVPNQSLLD 354
           + G E  +V EF+   +L D
Sbjct: 218 LVGDELWVVMEFLEGGALTD 237

>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 275 NKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCS 334
            ++G G  G+VYKG   G  AV +  +   T Q +  F NEV ++    H N++  +G S
Sbjct: 30  QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 335 ITGPESLLVYEFVPNQSLLDNL 356
            T P+  +V ++    SL  +L
Sbjct: 90  -TAPQLAIVTQWCEGSSLYHHL 110

>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 276 KLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSI 335
           KLGQG  G V+ GT  G   VA+K L   T    + F  E  ++  + H+ LV+L     
Sbjct: 15  KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVVS 73
Query: 336 TGPESLLVYEFVPNQSLLDNL 356
             P   +V E++   SLLD L
Sbjct: 74  EEP-IXIVTEYMSKGSLLDFL 93

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 271 FHESNKLGQGGSGSVYKGT-LPGGEAVAVKRLFYNT-TQWVDHF-FNEVNLISGINHKNL 327
           F +  K+G+G  G VYK      GE VA+K++  +T T+ V      E++L+  +NH N+
Sbjct: 4   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 328 VKLLGCSITGPESLLVYEFV 347
           VKLL    T  +  LV+E V
Sbjct: 64  VKLLDVIHTENKLYLVFEHV 83

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 276 KLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSI 335
           KLGQG  G V+ GT  G   VA+K L   T    + F  E  ++  + H+ LV+L     
Sbjct: 18  KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVVS 76
Query: 336 TGPESLLVYEFVPNQSLLDNL 356
             P   +V E++   SLLD L
Sbjct: 77  EEP-IYIVTEYMSKGSLLDFL 96

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 276 KLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSI 335
           KLGQG  G V+ GT  G   VA+K L   T    + F  E  ++  + H+ LV+L     
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 336 TGPESLLVYEFVPNQSLLDNL 356
             P   +V E++   SLLD L
Sbjct: 250 EEP-IYIVTEYMSKGSLLDFL 269

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 271 FHESNKLGQGGSGSVYKG-TLPGGEAVAVKRLFYNT-TQWVDHF-FNEVNLISGINHKNL 327
           F +  K+G+G  G VYK      GE VA+K++  +T T+ V      E++L+  +NH N+
Sbjct: 8   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 328 VKLLGCSITGPESLLVYEFV 347
           VKLL    T  +  LV+E V
Sbjct: 68  VKLLDVIHTENKLYLVFEHV 87

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 276 KLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSI 335
           KLGQG  G V+ GT  G   VA+K L   T    + F  E  ++  + H+ LV+L     
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 336 TGPESLLVYEFVPNQSLLDNL 356
             P   +V E++   SLLD L
Sbjct: 250 EEP-IYIVTEYMSKGSLLDFL 269

>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 276 KLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSI 335
           KLGQG  G V+ GT  G   VA+K L   T    + F  E  ++  + H+ LV+L     
Sbjct: 25  KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 336 TGPESLLVYEFVPNQSLLDNLFDKM 360
             P   +V E++   SLLD L  +M
Sbjct: 84  EEP-IYIVCEYMSKGSLLDFLKGEM 107

>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 275 NKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCS 334
            +LG G  G V+ G   G   VAVK L   +    D F  E NL+  + H+ LV+L    
Sbjct: 25  ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS-PDAFLAEANLMKQLQHQRLVRLYAV- 82
Query: 335 ITGPESLLVYEFVPNQSLLDNL 356
           +T     ++ E++ N SL+D L
Sbjct: 83  VTQEPIYIITEYMENGSLVDFL 104

>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 275 NKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCS 334
            +LG G  G V+ G   G   VAVK L   +    D F  E NL+  + H+ LV+L    
Sbjct: 24  ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS-PDAFLAEANLMKQLQHQRLVRLYAV- 81
Query: 335 ITGPESLLVYEFVPNQSLLDNL 356
           +T     ++ E++ N SL+D L
Sbjct: 82  VTQEPIYIITEYMENGSLVDFL 103

>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 275 NKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCS 334
            +LG G  G V+ G   G   VAVK L   +    D F  E NL+  + H+ LV+L    
Sbjct: 19  ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS-PDAFLAEANLMKQLQHQRLVRLYAV- 76
Query: 335 ITGPESLLVYEFVPNQSLLDNL 356
           +T     ++ E++ N SL+D L
Sbjct: 77  VTQEPIYIITEYMENGSLVDFL 98

>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 275 NKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCS 334
            ++G G  G+VYKG   G  AV +  +   T Q +  F NEV ++    H N++  +G S
Sbjct: 14  QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 335 ITGPESLLVYEFVPNQSLLDNL 356
            T P+  +V ++    SL  +L
Sbjct: 74  -TAPQLAIVTQWCEGSSLYHHL 94

>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 275 NKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCS 334
            +LG G  G V+ G   G   VAVK L   +    D F  E NL+  + H+ LV+L    
Sbjct: 20  ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS-PDAFLAEANLMKQLQHQRLVRLYAV- 77
Query: 335 ITGPESLLVYEFVPNQSLLDNL 356
           +T     ++ E++ N SL+D L
Sbjct: 78  VTQEPIYIITEYMENGSLVDFL 99

>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 275 NKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCS 334
            +LG G  G V+ G   G   VAVK L   +    D F  E NL+  + H+ LV+L    
Sbjct: 19  ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS-PDAFLAEANLMKQLQHQRLVRLYAV- 76
Query: 335 ITGPESLLVYEFVPNQSLLDNL 356
           +T     ++ E++ N SL+D L
Sbjct: 77  VTQEPIYIITEYMENGSLVDFL 98

>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 275 NKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCS 334
            +LG G  G V+ G   G   VAVK L   +    D F  E NL+  + H+ LV+L    
Sbjct: 14  ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS-PDAFLAEANLMKQLQHQRLVRLYAV- 71
Query: 335 ITGPESLLVYEFVPNQSLLDNL 356
           +T     ++ E++ N SL+D L
Sbjct: 72  VTQEPIYIITEYMENGSLVDFL 93

>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 275 NKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCS 334
            +LG G  G V+ G   G   VAVK L   +    D F  E NL+  + H+ LV+L    
Sbjct: 19  ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS-PDAFLAEANLMKQLQHQRLVRLYAV- 76
Query: 335 ITGPESLLVYEFVPNQSLLDNL 356
           +T     ++ E++ N SL+D L
Sbjct: 77  VTQEPIYIITEYMENGSLVDFL 98

>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 275 NKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCS 334
            +LG G  G V+ G   G   VAVK L   +    D F  E NL+  + H+ LV+L    
Sbjct: 25  ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS-PDAFLAEANLMKQLQHQRLVRLYAV- 82
Query: 335 ITGPESLLVYEFVPNQSLLDNL 356
           +T     ++ E++ N SL+D L
Sbjct: 83  VTQEPIYIITEYMENGSLVDFL 104

>pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 275 NKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCS 334
            +LG G  G V+ G   G   VAVK L   +    D F  E NL+  + H+ LV+L    
Sbjct: 29  ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS-PDAFLAEANLMKQLQHQRLVRLYAV- 86
Query: 335 ITGPESLLVYEFVPNQSLLDNL 356
           +T     ++ E++ N SL+D L
Sbjct: 87  VTQEPIYIITEYMENGSLVDFL 108

>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 275 NKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCS 334
            +LG G  G V+ G   G   VAVK L   +    D F  E NL+  + H+ LV+L    
Sbjct: 21  ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS-PDAFLAEANLMKQLQHQRLVRLYAV- 78
Query: 335 ITGPESLLVYEFVPNQSLLDNL 356
           +T     ++ E++ N SL+D L
Sbjct: 79  VTQEPIYIITEYMENGSLVDFL 100

>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 275 NKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCS 334
            +LG G  G V+ G   G   VAVK L   +    D F  E NL+  + H+ LV+L    
Sbjct: 28  ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS-PDAFLAEANLMKQLQHQRLVRLYAV- 85
Query: 335 ITGPESLLVYEFVPNQSLLDNL 356
           +T     ++ E++ N SL+D L
Sbjct: 86  VTQEPIYIITEYMENGSLVDFL 107

>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 275 NKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCS 334
            +LG G  G V+ G   G   VAVK L   +    D F  E NL+  + H+ LV+L    
Sbjct: 27  ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS-PDAFLAEANLMKQLQHQRLVRLYAV- 84
Query: 335 ITGPESLLVYEFVPNQSLLDNL 356
           +T     ++ E++ N SL+D L
Sbjct: 85  VTQEPIYIITEYMENGSLVDFL 106

>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 275 NKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCS 334
            +LG G  G V+ G   G   VAVK L   +    D F  E NL+  + H+ LV+L    
Sbjct: 15  ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS-PDAFLAEANLMKQLQHQRLVRLYAV- 72
Query: 335 ITGPESLLVYEFVPNQSLLDNL 356
           +T     ++ E++ N SL+D L
Sbjct: 73  VTQEPIYIITEYMENGSLVDFL 94

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 275 NKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCS 334
            ++G G  G+VYKG   G  AV +  +   T Q +  F NEV ++    H N++  +G S
Sbjct: 18  QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 77
Query: 335 ITGPESLLVYEFVPNQSLLDNL 356
            T P+  +V ++    SL  +L
Sbjct: 78  -TKPQLAIVTQWCEGSSLYHHL 98

>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 275 NKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCS 334
            ++G G  G+VYKG   G  AV +  +   T Q +  F NEV ++    H N++  +G S
Sbjct: 41  QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 100
Query: 335 ITGPESLLVYEFVPNQSLLDNL 356
            T P+  +V ++    SL  +L
Sbjct: 101 -TKPQLAIVTQWCEGSSLYHHL 121

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 271 FHESNKLGQGGSGSVYKG-TLPGGEAVAVKRLFYNT-TQWVDHF-FNEVNLISGINHKNL 327
           F +  K+G+G  G VYK      GE VA+ ++  +T T+ V      E++L+  +NH N+
Sbjct: 5   FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 328 VKLLGCSITGPESLLVYEFV 347
           VKLL    T  +  LV+EF+
Sbjct: 65  VKLLDVIHTENKLYLVFEFL 84

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 271 FHESNKLGQGGSGSVYKG-TLPGGEAVAVKRLFYNT-TQWVDHF-FNEVNLISGINHKNL 327
           F +  K+G+G  G VYK      GE VA+ ++  +T T+ V      E++L+  +NH N+
Sbjct: 4   FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 328 VKLLGCSITGPESLLVYEFV 347
           VKLL    T  +  LV+EF+
Sbjct: 64  VKLLDVIHTENKLYLVFEFL 83

>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 275 NKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCS 334
            ++G G  G+VYKG   G  AV +  +   T Q +  F NEV ++    H N++  +G S
Sbjct: 42  QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 335 ITGPESLLVYEFVPNQSLLDNL 356
            T P+  +V ++    SL  +L
Sbjct: 102 -TKPQLAIVTQWCEGSSLYHHL 122

>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 275 NKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCS 334
            ++G G  G+VYKG   G  AV +  +   T Q +  F NEV ++    H N++  +G S
Sbjct: 34  QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 93
Query: 335 ITGPESLLVYEFVPNQSLLDNL 356
            T P+  +V ++    SL  +L
Sbjct: 94  -TKPQLAIVTQWCEGSSLYHHL 114

>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 275 NKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCS 334
            ++G G  G+VYKG   G  AV +  +   T Q +  F NEV ++    H N++  +G S
Sbjct: 42  QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 335 ITGPESLLVYEFVPNQSLLDNL 356
            T P+  +V ++    SL  +L
Sbjct: 102 -TKPQLAIVTQWCEGSSLYHHL 122

>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 275 NKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCS 334
            ++G G  G+VYKG   G  AV +  +   T Q +  F NEV ++    H N++  +G S
Sbjct: 16  QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 75
Query: 335 ITGPESLLVYEFVPNQSLLDNL 356
            T P+  +V ++    SL  +L
Sbjct: 76  -TKPQLAIVTQWCEGSSLYHHL 96

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 275 NKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCS 334
            ++G G  G+VYKG   G  AV +  +   T Q +  F NEV ++    H N++  +G S
Sbjct: 30  QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 335 ITGPESLLVYEFVPNQSLLDNL 356
            T P+  +V ++    SL  +L
Sbjct: 90  -TKPQLAIVTQWCEGSSLYHHL 110

>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 275 NKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCS 334
            ++G G  G+VYKG   G  AV +  +   T Q +  F NEV ++    H N++  +G S
Sbjct: 19  QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 335 ITGPESLLVYEFVPNQSLLDNL 356
            T P+  +V ++    SL  +L
Sbjct: 79  -TKPQLAIVTQWCEGSSLYHHL 99

>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 275 NKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCS 334
            ++G G  G+VYKG   G  AV +  +   T Q +  F NEV ++    H N++  +G S
Sbjct: 14  QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 335 ITGPESLLVYEFVPNQSLLDNL 356
            T P+  +V ++    SL  +L
Sbjct: 74  -TKPQLAIVTQWCEGSSLYHHL 94

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 276 KLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSI 335
           KLGQG  G V+ GT  G   VA+K L   T    + F  E  ++  + H+ LV+L     
Sbjct: 274 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVVS 332
Query: 336 TGPESLLVYEFVPNQSLLDNL 356
             P   +V E++   SLLD L
Sbjct: 333 EEP-IYIVTEYMSKGSLLDFL 352

>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 276 KLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSI 335
           KLGQG  G V+ GT  G   VA+K L   T    + F  E  ++  + H+ LV+L     
Sbjct: 22  KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 336 TGPESLLVYEFVPNQSLLDNL 356
             P   +V E++   SLLD L
Sbjct: 81  EEP-IYIVTEYMNKGSLLDFL 100

>pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 275 NKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCS 334
            ++G G  G+VYKG   G  AV +  +   T Q +  F NEV ++    H N++  +G S
Sbjct: 14  QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 335 ITGPESLLVYEFVPNQSLLDNL 356
            T P+  +V ++    SL  +L
Sbjct: 74  -TKPQLAIVTQWCEGSSLYHHL 94

>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 275 NKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCS 334
            ++G G  G+VYKG   G  AV +  +   T Q +  F NEV ++    H N++  +G S
Sbjct: 19  QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 335 ITGPESLLVYEFVPNQSLLDNL 356
            T P+  +V ++    SL  +L
Sbjct: 79  -TKPQLAIVTQWCEGSSLYHHL 99

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 41.2 bits (95), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 276 KLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSI 335
           KLGQG  G V+ GT  G   VA+K L   T    + F  E  ++  + H+ LV+L     
Sbjct: 22  KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 336 TGPESLLVYEFVPNQSLLDNL 356
             P   +V E++   SLLD L
Sbjct: 81  EEP-IYIVTEYMNKGSLLDFL 100

>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452

Iteration: 1
 Score = 41.2 bits (95), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 276 KLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSI 335
           KLGQG  G V+ GT  G   VA+K L   T    + F  E  ++  + H+ LV+L     
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 336 TGPESLLVYEFVPNQSLLDNL 356
             P   +V E++   SLLD L
Sbjct: 250 EEP-IYIVGEYMSKGSLLDFL 269

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	363
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	3e-42
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	2e-38
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	2e-36
3soc_A	322	Activin receptor type-2A; structural genomics cons	5e-24
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	4e-21
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	1e-16
2e79_A	108	Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect	3e-16
2e79_A	108	Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect	4e-15
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	1e-15
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	2e-15
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	5e-15
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	2e-14
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	1e-13
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	1e-13
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	1e-13
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	2e-13
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	4e-13
3pls_A	298	Macrophage-stimulating protein receptor; protein k	5e-13
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	5e-13
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	6e-13
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	7e-13
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	8e-13
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	9e-13
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	1e-12
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	1e-12
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	1e-12
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	1e-12
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	1e-12
3q4u_A	301	Activin receptor type-1; structural genomics conso	1e-12
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	1e-12
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	2e-12
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	2e-12
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	2e-12
4aoj_A	329	High affinity nerve growth factor receptor; transf	2e-12
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	2e-12
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	2e-12
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	2e-12
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	3e-12
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	3e-12
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	3e-12
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	3e-12
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	3e-12
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	3e-12
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	4e-12
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	5e-12
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	6e-12
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	9e-12
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	1e-11
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	1e-11
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	1e-11
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	1e-11
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	2e-11
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	2e-11
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	2e-11
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	2e-11
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	2e-11
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	2e-11
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	2e-11
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	3e-11
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	3e-11
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	4e-11
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	4e-11
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	5e-11
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	5e-11
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	7e-11
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	8e-11
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	9e-11
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	2e-10
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	2e-10
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	3e-10
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	3e-10
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	5e-10
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	6e-10
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	6e-10
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	6e-10
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	7e-10
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	7e-10
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	9e-10
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	3e-09
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	2e-08
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	2e-08
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	2e-08
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	2e-08
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	2e-08
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	3e-08
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	4e-08
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	4e-08
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	7e-08
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	1e-07
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	2e-07
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	2e-07
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	3e-07
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	1e-06
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	2e-06
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	5e-06
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	5e-06
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	7e-06
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	9e-06
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	9e-06
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	1e-05
2a19_B	284	Interferon-induced, double-stranded RNA-activated	1e-05
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	1e-05
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	2e-05
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	2e-05
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	2e-05
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	2e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-05
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	5e-05
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	5e-05
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	5e-05
3niz_A	311	Rhodanese family protein; structural genomics, str	7e-05
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	7e-05
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	7e-05
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	8e-05
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	8e-05
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	8e-05
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	9e-05
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	1e-04
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	1e-04
3uqc_A	286	Probable conserved transmembrane protein; structur	1e-04
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	2e-04
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	2e-04
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	2e-04
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	2e-04
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	3e-04
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	3e-04
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	3e-04
3o0g_A	292	Cell division protein kinase 5; kinase activator c	3e-04
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	4e-04
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	4e-04
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	4e-04
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	5e-04
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	5e-04
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	6e-04
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	8e-04
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	9e-04

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score =  149 bits (378), Expect = 3e-42
 Identities = 44/102 (43%), Positives = 59/102 (57%), Gaps = 1/102 (0%)

Query: 259 FSYETLEKATNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDH-FFNEVN 317
           FS   L+ A++ F   N LG+GG G VYKG L  G  VAVKRL    TQ  +  F  EV 
Sbjct: 20  FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVE 79

Query: 318 LISGINHKNLVKLLGCSITGPESLLVYEFVPNQSLLDNLFDK 359
           +IS   H+NL++L G  +T  E LLVY ++ N S+   L ++
Sbjct: 80  MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRER 121

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score =  138 bits (351), Expect = 2e-38
 Identities = 35/109 (32%), Positives = 54/109 (49%)

Query: 251 AVNKSKLNFSYETLEKATNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVD 310
            V           LE+ATN F     +G G  G VYKG L  G  VA+KR    ++Q ++
Sbjct: 21  LVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIE 80

Query: 311 HFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQSLLDNLFDK 359
            F  E+  +S   H +LV L+G      E +L+Y+++ N +L  +L+  
Sbjct: 81  EFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGS 129

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score =  133 bits (337), Expect = 2e-36
 Identities = 44/111 (39%), Positives = 60/111 (54%), Gaps = 11/111 (9%)

Query: 259 FSYETLEKATNYFHE------SNKLGQGGSGSVYKGTLPGGEAVAVKRL----FYNTTQW 308
           FS+  L+  TN F E       NK+G+GG G VYKG +     VAVK+L       T + 
Sbjct: 15  FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTT-VAVKKLAAMVDITTEEL 73

Query: 309 VDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQSLLDNLFDK 359
              F  E+ +++   H+NLV+LLG S  G +  LVY ++PN SLLD L   
Sbjct: 74  KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCL 124

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 99.8 bits (249), Expect = 5e-24
 Identities = 28/113 (24%), Positives = 44/113 (38%), Gaps = 8/113 (7%)

Query: 255 SKLNFSYETLEKATNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQ-WVDHFF 313
           S ++   E L   +          +G  G V+K      E VAVK       Q W     
Sbjct: 10  SGVDLGTENLYFQSMPLQLLEVKARGRFGCVWKAQ-LLNEYVAVKIFPIQDKQSW--QNE 66

Query: 314 NEVNLISGINHKNLVKLLGCSITGP----ESLLVYEFVPNQSLLDNLFDKMLS 362
            EV  + G+ H+N+++ +G    G     +  L+  F    SL D L   ++S
Sbjct: 67  YEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANVVS 119

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 91.8 bits (228), Expect = 4e-21
 Identities = 27/114 (23%), Positives = 42/114 (36%), Gaps = 11/114 (9%)

Query: 257 LNFSYETLEKATNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEV 316
           +  +        +       +G+G  G+VYKG+L     VAVK     +     +F NE 
Sbjct: 1   MEAAASEPSLDLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVF---SFANRQNFINEK 56

Query: 317 N--LISGINHKNLVKLLGCSITGPES-----LLVYEFVPNQSLLDNLFDKMLSP 363
           N   +  + H N+ + +              LLV E+ PN SL   L       
Sbjct: 57  NIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDW 110

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 78.1 bits (193), Expect = 1e-16
 Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 5/93 (5%)

Query: 275 NKLGQGGSGSVYKGTLPGGEAVAVKRL----FYNTTQWVDHFFNEVNLISGINHKNLVKL 330
             +G GG G VY+     G+ VAVK        + +Q +++   E  L + + H N++ L
Sbjct: 13  EIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIAL 71

Query: 331 LGCSITGPESLLVYEFVPNQSLLDNLFDKMLSP 363
            G  +  P   LV EF     L   L  K + P
Sbjct: 72  RGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPP 104

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 75.4 bits (186), Expect = 1e-15
 Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 3/87 (3%)

Query: 275 NKLGQGGSGSVYKGTLPGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLG 332
            K+G G  G+V++     G  VAVK L       + V+ F  EV ++  + H N+V  +G
Sbjct: 43  EKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMG 101

Query: 333 CSITGPESLLVYEFVPNQSLLDNLFDK 359
                P   +V E++   SL   L   
Sbjct: 102 AVTQPPNLSIVTEYLSRGSLYRLLHKS 128

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 75.0 bits (185), Expect = 2e-15
 Identities = 33/93 (35%), Positives = 44/93 (47%), Gaps = 10/93 (10%)

Query: 275 NKLGQGGSGSVYKGTLPG-GEAVAVKRLFY-------NTTQWVDHFFNEVNLISGINHKN 326
            ++G+GG G V+KG L      VA+K L            +    F  EV ++S +NH N
Sbjct: 25  KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPN 84

Query: 327 LVKLLGCSITGPESLLVYEFVPNQSLLDNLFDK 359
           +VKL G     P   +V EFVP   L   L DK
Sbjct: 85  IVKLYGLMHNPP--RMVMEFVPCGDLYHRLLDK 115

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 73.4 bits (181), Expect = 5e-15
 Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 5/86 (5%)

Query: 275 NKLGQGGSGSVYKGTLPGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLG 332
            KL +  SG ++KG    G  + VK L     +T+    F  E   +   +H N++ +LG
Sbjct: 16  TKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLG 74

Query: 333 CSITGPESLL--VYEFVPNQSLLDNL 356
              + P      +  ++P  SL + L
Sbjct: 75  ACQSPPAPHPTLITHWMPYGSLYNVL 100

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 72.4 bits (178), Expect = 2e-14
 Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 7/87 (8%)

Query: 275 NKLGQGGSGSVYKGTLPG-----GEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVK 329
           ++LG+G  GSV            G  VAVK+L ++       F  E+ ++  ++   +VK
Sbjct: 29  SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 88

Query: 330 LLG-CSITGPESL-LVYEFVPNQSLLD 354
             G     G +SL LV E++P+  L D
Sbjct: 89  YRGVSYGPGRQSLRLVMEYLPSGCLRD 115

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 70.1 bits (172), Expect = 1e-13
 Identities = 19/86 (22%), Positives = 34/86 (39%), Gaps = 1/86 (1%)

Query: 275 NKLGQGGSGSVYKGTLPG-GEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGC 333
             LG+G  G   K T    GE + +K L     +    F  EV ++  + H N++K +G 
Sbjct: 16  EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGV 75

Query: 334 SITGPESLLVYEFVPNQSLLDNLFDK 359
                    + E++   +L   +   
Sbjct: 76  LYKDKRLNFITEYIKGGTLRGIIKSM 101

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 69.7 bits (171), Expect = 1e-13
 Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 7/89 (7%)

Query: 275 NKLGQGGSGSVYKGTLPG-----GEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVK 329
            +LG+G  GSV            GE VAVK+L ++T + +  F  E+ ++  + H N+VK
Sbjct: 47  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 106

Query: 330 LLG-CSITGPESL-LVYEFVPNQSLLDNL 356
             G C   G  +L L+ E++P  SL D L
Sbjct: 107 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 135

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 69.6 bits (171), Expect = 1e-13
 Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 7/89 (7%)

Query: 275 NKLGQGGSGSVYKGTLPG-----GEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVK 329
            +LG+G  GSV            GE VAVK+L ++T + +  F  E+ ++  + H N+VK
Sbjct: 16  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75

Query: 330 LLG-CSITGPESL-LVYEFVPNQSLLDNL 356
             G C   G  +L L+ E++P  SL D L
Sbjct: 76  YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 104

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 68.8 bits (169), Expect = 2e-13
 Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 7/89 (7%)

Query: 275 NKLGQGGSGSVYKGTLPGGE------AVAVKRLFYNTTQW-VDHFFNEVNLISGINHKNL 327
             LG+G  G V K T    +       VAVK L  N +   +    +E N++  +NH ++
Sbjct: 29  KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88

Query: 328 VKLLGCSITGPESLLVYEFVPNQSLLDNL 356
           +KL G        LL+ E+    SL   L
Sbjct: 89  IKLYGACSQDGPLLLIVEYAKYGSLRGFL 117

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 68.1 bits (167), Expect = 4e-13
 Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 5/89 (5%)

Query: 271 FHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKL 330
                 +G+G  G V K      + VA+K++   +      F  E+  +S +NH N+VKL
Sbjct: 10  IEVEEVVGRGAFGVVCKAKW-RAKDVAIKQI--ESESERKAFIVELRQLSRVNHPNIVKL 66

Query: 331 LGCSITGPESLLVYEFVPNQSLLDNLFDK 359
            G     P   LV E+    SL + L   
Sbjct: 67  YGAC-LNPVC-LVMEYAEGGSLYNVLHGA 93

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 67.7 bits (166), Expect = 5e-13
 Identities = 23/91 (25%), Positives = 38/91 (41%), Gaps = 6/91 (6%)

Query: 272 HESNKLGQGGSGSVYKGTLPGGE----AVAVKRLFYNTTQW-VDHFFNEVNLISGINHKN 326
           H    +G+G  G VY G            A+K L   T    V+ F  E  L+ G+NH N
Sbjct: 24  HSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPN 83

Query: 327 LVKLLG-CSITGPESLLVYEFVPNQSLLDNL 356
           ++ L+G          ++  ++ +  LL  +
Sbjct: 84  VLALIGIMLPPEGLPHVLLPYMCHGDLLQFI 114

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 67.6 bits (166), Expect = 5e-13
 Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 3/83 (3%)

Query: 275 NKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLG-C 333
            +LG G  G V  G   G   VA+K +   +    D F  E  ++  ++H+ LV+L G C
Sbjct: 30  KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS-EDEFIEEAKVMMNLSHEKLVQLYGVC 88

Query: 334 SITGPESLLVYEFVPNQSLLDNL 356
           +   P   ++ E++ N  LL+ L
Sbjct: 89  TKQRP-IFIITEYMANGCLLNYL 110

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 67.3 bits (165), Expect = 6e-13
 Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 8/89 (8%)

Query: 276 KLGQGGSGSVYKGTL--PGGEA------VAVKRLFYNTTQWVDHFFNEVNLISGINHKNL 327
            LGQG    ++KG     G         V +K L      + + FF   +++S ++HK+L
Sbjct: 15  SLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHL 74

Query: 328 VKLLGCSITGPESLLVYEFVPNQSLLDNL 356
           V   G  + G E++LV EFV   SL   L
Sbjct: 75  VLNYGVCVCGDENILVQEFVKFGSLDTYL 103

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 67.7 bits (166), Expect = 7e-13
 Identities = 30/90 (33%), Positives = 42/90 (46%), Gaps = 8/90 (8%)

Query: 275 NKLGQGGSGSVYKGTLPG-----GEAVAVKRL-FYNTTQWVDHFFNEVNLISGINHKNLV 328
             LG+G  G V            GE VAVK L      Q    +  E++++  + H++++
Sbjct: 37  RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHII 96

Query: 329 KLLG-CSITGPESL-LVYEFVPNQSLLDNL 356
           K  G C   G  SL LV E+VP  SL D L
Sbjct: 97  KYKGCCEDAGAASLQLVMEYVPLGSLRDYL 126

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 67.3 bits (165), Expect = 8e-13
 Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 8/89 (8%)

Query: 275 NKLGQGGSGSVYKGTLPGGE------AVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLV 328
            +LG+G  G V+               VAVK L   T      F  E  L++ + H+++V
Sbjct: 21  RELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIV 80

Query: 329 KLLG-CSITGPESLLVYEFVPNQSLLDNL 356
           K  G C    P  ++V+E++ +  L   L
Sbjct: 81  KFYGVCGDGDP-LIMVFEYMKHGDLNKFL 108

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 67.5 bits (165), Expect = 9e-13
 Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 10/95 (10%)

Query: 275 NKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNE--VNLISGINHKNLVKLLG 332
            ++G+G  G V+ G    GE VAVK  F   T     +F E  +     + H+N++  + 
Sbjct: 43  KQIGKGRYGEVWMGKW-RGEKVAVKVFF---TTEEASWFRETEIYQTVLMRHENILGFIA 98

Query: 333 CSITGPES----LLVYEFVPNQSLLDNLFDKMLSP 363
             I G  S     L+ ++  N SL D L    L  
Sbjct: 99  ADIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDA 133

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 66.4 bits (163), Expect = 1e-12
 Identities = 29/82 (35%), Positives = 39/82 (47%), Gaps = 3/82 (3%)

Query: 276 KLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLG-CS 334
           +LG G  G V  G   G   VAVK +   +    D FF E   +  ++H  LVK  G CS
Sbjct: 15  ELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMS-EDEFFQEAQTMMKLSHPKLVKFYGVCS 73

Query: 335 ITGPESLLVYEFVPNQSLLDNL 356
              P   +V E++ N  LL+ L
Sbjct: 74  KEYP-IYIVTEYISNGCLLNYL 94

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 66.9 bits (164), Expect = 1e-12
 Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 5/84 (5%)

Query: 275 NKLGQGGSGSVYKGTLPGGEAVAVKRLF--YNTTQWVDHFFNEVNLISGINHKNLVKLLG 332
            ++G G  G+VYKG   G   VAVK L     T Q +  F NEV ++    H N++  +G
Sbjct: 30  QRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 87

Query: 333 CSITGPESLLVYEFVPNQSLLDNL 356
            S T P+  +V ++    SL  +L
Sbjct: 88  YS-TAPQLAIVTQWCEGSSLYHHL 110

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 66.5 bits (163), Expect = 1e-12
 Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 3/83 (3%)

Query: 275 NKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLG-C 333
            ++G G  G V+ G     + VA+K +        + F  E  ++  ++H  LV+L G C
Sbjct: 14  QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS-EEDFIEEAEVMMKLSHPKLVQLYGVC 72

Query: 334 SITGPESLLVYEFVPNQSLLDNL 356
               P   LV EF+ +  L D L
Sbjct: 73  LEQAP-ICLVTEFMEHGCLSDYL 94

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 67.0 bits (164), Expect = 1e-12
 Identities = 18/84 (21%), Positives = 35/84 (41%), Gaps = 4/84 (4%)

Query: 275 NKLGQGGSGSVYKGTLPGGEAVAVKRLF--YNTTQWVDHFFNEVNLISGINHKNLVKLLG 332
             +G+G  G VY G   G   VA++ +    +    +  F  EV       H+N+V  +G
Sbjct: 39  ELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMG 96

Query: 333 CSITGPESLLVYEFVPNQSLLDNL 356
             ++ P   ++      ++L   +
Sbjct: 97  ACMSPPHLAIITSLCKGRTLYSVV 120

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 66.9 bits (164), Expect = 1e-12
 Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 7/88 (7%)

Query: 275 NKLGQGGSGSVYKGTLPGGEA---VAVKRL--FYNTTQWVDHFFNEVNLISGI-NHKNLV 328
           + +G+G  G V K  +         A+KR+  + +     D F  E+ ++  + +H N++
Sbjct: 31  DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRD-FAGELEVLCKLGHHPNII 89

Query: 329 KLLGCSITGPESLLVYEFVPNQSLLDNL 356
            LLG         L  E+ P+ +LLD L
Sbjct: 90  NLLGACEHRGYLYLAIEYAPHGNLLDFL 117

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 66.6 bits (163), Expect = 1e-12
 Identities = 23/95 (24%), Positives = 40/95 (42%), Gaps = 10/95 (10%)

Query: 275 NKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNE--VNLISGINHKNLVKLLG 332
             +G+G  G V++G+   GE VAVK      ++    +F E  +     + H+N++  + 
Sbjct: 14  ECVGKGRYGEVWRGSW-QGENVAVKIFS---SRDEKSWFRETELYNTVMLRHENILGFIA 69

Query: 333 CSITGPES----LLVYEFVPNQSLLDNLFDKMLSP 363
             +T   S     L+  +    SL D L    L  
Sbjct: 70  SDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDT 104

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 66.6 bits (163), Expect = 1e-12
 Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 10/95 (10%)

Query: 269 NYFHESNKLGQGGSGSVYKGTLPG-----GEAVAVKRL--FYNTTQWVDHFFNEVNLISG 321
            +      LG+G  G V            GE VAVK L          D    E+ ++  
Sbjct: 21  RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIAD-LKKEIEILRN 79

Query: 322 INHKNLVKLLG-CSITGPESL-LVYEFVPNQSLLD 354
           + H+N+VK  G C+  G   + L+ EF+P+ SL +
Sbjct: 80  LYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKE 114

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 66.1 bits (162), Expect = 2e-12
 Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 2/82 (2%)

Query: 275 NKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCS 334
            +LG G  G V+ G   G   VAVK L   +    D F  E NL+  + H+ LV+L    
Sbjct: 19  ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS-PDAFLAEANLMKQLQHQRLVRLYAV- 76

Query: 335 ITGPESLLVYEFVPNQSLLDNL 356
           +T     ++ E++ N SL+D L
Sbjct: 77  VTQEPIYIITEYMENGSLVDFL 98

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 66.6 bits (163), Expect = 2e-12
 Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 11/91 (12%)

Query: 275 NKLGQGGSGSVYKGTLPGGE------AVAVKRL--FYNTTQWVDHFFNEVNLISGINHKN 326
             LG G  G VY+G + G         VAVK L    +    +D F  E  +IS  NH+N
Sbjct: 36  RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD-FLMEALIISKFNHQN 94

Query: 327 LVKLLG-CSITGPESLLVYEFVPNQSLLDNL 356
           +V+ +G    + P   ++ E +    L   L
Sbjct: 95  IVRCIGVSLQSLP-RFILMELMAGGDLKSFL 124

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 66.6 bits (163), Expect = 2e-12
 Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 8/89 (8%)

Query: 275 NKLGQGGSGSVYKGTLPGGE------AVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLV 328
            +LG+G  G V+               VAVK L   +      F  E  L++ + H+++V
Sbjct: 47  WELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIV 106

Query: 329 KLLG-CSITGPESLLVYEFVPNQSLLDNL 356
           +  G C+   P  L+V+E++ +  L   L
Sbjct: 107 RFFGVCTEGRP-LLMVFEYMRHGDLNRFL 134

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 66.6 bits (163), Expect = 2e-12
 Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 11/91 (12%)

Query: 275 NKLGQGGSGSVYKGTLPGGE------AVAVKRL--FYNTTQWVDHFFNEVNLISGINHKN 326
             LG G  G VY+G + G         VAVK L    +    +D F  E  +IS  NH+N
Sbjct: 77  RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD-FLMEALIISKFNHQN 135

Query: 327 LVKLLG-CSITGPESLLVYEFVPNQSLLDNL 356
           +V+ +G    + P   ++ E +    L   L
Sbjct: 136 IVRCIGVSLQSLP-RFILLELMAGGDLKSFL 165

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 65.7 bits (161), Expect = 2e-12
 Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 4/83 (4%)

Query: 275 NKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLG-C 333
             +G+G  G V  G   G + VAVK +  + T     F  E ++++ + H NLV+LLG  
Sbjct: 27  QTIGKGEFGDVMLGDYRGNK-VAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVI 83

Query: 334 SITGPESLLVYEFVPNQSLLDNL 356
                   +V E++   SL+D L
Sbjct: 84  VEEKGGLYIVTEYMAKGSLVDYL 106

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 66.7 bits (163), Expect = 2e-12
 Identities = 31/81 (38%), Positives = 43/81 (53%), Gaps = 2/81 (2%)

Query: 275 NKLGQGGSGSVYKGTLPGGE-AVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGC 333
           +KLG G  G VY+G        VAVK L  +T + V+ F  E  ++  I H NLV+LLG 
Sbjct: 226 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 284

Query: 334 SITGPESLLVYEFVPNQSLLD 354
               P   ++ EF+   +LLD
Sbjct: 285 CTREPPFYIITEFMTYGNLLD 305

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 65.7 bits (161), Expect = 3e-12
 Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 7/88 (7%)

Query: 275 NKLGQGGSGSVYKGTL--PGGEA---VAVKRLFYNTTQWV-DHFFNEVNLISGINHKNLV 328
             LG G  G+VYKG     G +    VA+K L   T+        +E  +++ +++ ++ 
Sbjct: 21  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80

Query: 329 KLLGCSITGPESLLVYEFVPNQSLLDNL 356
           +LLG         L+ + +P   LLD +
Sbjct: 81  RLLGI-CLTSTVQLITQLMPFGCLLDYV 107

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 65.8 bits (161), Expect = 3e-12
 Identities = 22/94 (23%), Positives = 38/94 (40%), Gaps = 12/94 (12%)

Query: 275 NKLGQGGSGSVYKGTLPGGE----AVAVKRLFYNTTQWVDH--FFNEVNLISGINHKNLV 328
             LG+G  GSV +  L   +     VAVK L  +     D   F  E   +   +H ++ 
Sbjct: 29  RMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVA 88

Query: 329 KLLG-CSITGPES-----LLVYEFVPNQSLLDNL 356
           KL+G    +  +      +++  F+ +  L   L
Sbjct: 89  KLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFL 122

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 65.8 bits (161), Expect = 3e-12
 Identities = 23/94 (24%), Positives = 41/94 (43%), Gaps = 13/94 (13%)

Query: 275 NKLGQGGSGSVYKGTLPGGE----AVAVKRL---FYNTTQWVDHFFNEVNLISGINHKNL 327
             LG+G  GSV +G L   +     VAVK +     +  +  + F +E   +   +H N+
Sbjct: 40  KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEE-FLSEAACMKDFSHPNV 98

Query: 328 VKLLG-CSITGPES----LLVYEFVPNQSLLDNL 356
           ++LLG C     +     +++  F+    L   L
Sbjct: 99  IRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYL 132

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 65.3 bits (160), Expect = 3e-12
 Identities = 32/83 (38%), Positives = 44/83 (53%), Gaps = 2/83 (2%)

Query: 275 NKLGQGGSGSVYKGTLPGGE-AVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGC 333
           +KLG G  G VY+G        VAVK L  +T + V+ F  E  ++  I H NLV+LLG 
Sbjct: 19  HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 77

Query: 334 SITGPESLLVYEFVPNQSLLDNL 356
               P   ++ EF+   +LLD L
Sbjct: 78  CTREPPFYIITEFMTYGNLLDYL 100

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 65.6 bits (160), Expect = 3e-12
 Identities = 22/95 (23%), Positives = 41/95 (43%), Gaps = 10/95 (10%)

Query: 275 NKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNE--VNLISGINHKNLVKLLG 332
             +G+G  G V++G    GE VAVK      ++    +F E  +     + H+N++  + 
Sbjct: 48  ESIGKGRFGEVWRGKW-RGEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIA 103

Query: 333 CSI----TGPESLLVYEFVPNQSLLDNLFDKMLSP 363
                  T  +  LV ++  + SL D L    ++ 
Sbjct: 104 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTV 138

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 65.8 bits (161), Expect = 4e-12
 Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 4/81 (4%)

Query: 275 NKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLG-C 333
             +G+G  G V  G   G + VAVK +  + T     F  E ++++ + H NLV+LLG  
Sbjct: 199 QTIGKGEFGDVMLGDYRGNK-VAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVI 255

Query: 334 SITGPESLLVYEFVPNQSLLD 354
                   +V E++   SL+D
Sbjct: 256 VEEKGGLYIVTEYMAKGSLVD 276

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 65.0 bits (159), Expect = 5e-12
 Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 9/90 (10%)

Query: 275 NKLGQGGSGSVYKGTLPGGE------AVAVKRL--FYNTTQWVDHFFNEVNLISGINHKN 326
             +G+G  G V++   PG         VAVK L    +     D F  E  L++  ++ N
Sbjct: 53  RDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQAD-FQREAALMAEFDNPN 111

Query: 327 LVKLLGCSITGPESLLVYEFVPNQSLLDNL 356
           +VKLLG    G    L++E++    L + L
Sbjct: 112 IVKLLGVCAVGKPMCLLFEYMAYGDLNEFL 141

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 64.6 bits (158), Expect = 6e-12
 Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 7/89 (7%)

Query: 275 NKLGQGGSGSVYKGTLPGGE------AVAVKRLFYNTTQW-VDHFFNEVNLISGINHKNL 327
            +LGQG  G VY+G   G         VA+K +    +      F NE +++   N  ++
Sbjct: 31  RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 90

Query: 328 VKLLGCSITGPESLLVYEFVPNQSLLDNL 356
           V+LLG    G  +L++ E +    L   L
Sbjct: 91  VRLLGVVSQGQPTLVIMELMTRGDLKSYL 119

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 64.2 bits (157), Expect = 9e-12
 Identities = 33/139 (23%), Positives = 53/139 (38%), Gaps = 16/139 (11%)

Query: 234 KLLQKRRERKQLGALQVAVNKSKLNFSYETLEKATNYFHE--------SNKLGQGGSGSV 285
           K  ++ R   QL  +QV  +     F  +  E   +   E           LG G  G V
Sbjct: 2   KYKKQFRYESQLQMVQVTGSSDNEYFYVDFREYEYDLKWEFPRENLEFGKVLGSGAFGKV 61

Query: 286 YKGTLPGGEA------VAVKRLFYNTTQW-VDHFFNEVNLISGI-NHKNLVKLLGCSITG 337
              T  G         VAVK L         +   +E+ +++ + +H+N+V LLG     
Sbjct: 62  MNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLS 121

Query: 338 PESLLVYEFVPNQSLLDNL 356
               L++E+     LL+ L
Sbjct: 122 GPIYLIFEYCCYGDLLNYL 140

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 64.7 bits (158), Expect = 1e-11
 Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 2/82 (2%)

Query: 275 NKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCS 334
            KLG G  G V+  T      VAVK +   +   V+ F  E N++  + H  LVKL    
Sbjct: 194 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMS-VEAFLAEANVMKTLQHDKLVKLHAV- 251

Query: 335 ITGPESLLVYEFVPNQSLLDNL 356
           +T     ++ EF+   SLLD L
Sbjct: 252 VTKEPIYIITEFMAKGSLLDFL 273

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 63.8 bits (156), Expect = 1e-11
 Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 9/90 (10%)

Query: 275 NKLGQGGSGSVYKGTLPGGE------AVAVKRLFYNTT-QWVDHFFNEVNLISGINHKNL 327
            +LG+   G VYKG L G        AVA+K L         + F +E  L + + H N+
Sbjct: 15  EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV 74

Query: 328 VKLLG-CSITGPESLLVYEFVPNQSLLDNL 356
           V LLG  +   P   +++ +  +  L + L
Sbjct: 75  VCLLGVVTKDQP-LSMIFSYCSHGDLHEFL 103

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 63.8 bits (156), Expect = 1e-11
 Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 8/89 (8%)

Query: 275 NKLGQGGSGSVYKGTLPGGE----AVAVKRL--FYNTTQWVDHFFNEVNLISGINHKNLV 328
             +G+G  G VY GTL   +      AVK L    +  +    F  E  ++   +H N++
Sbjct: 31  EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHPNVL 89

Query: 329 KLLG-CSITGPESLLVYEFVPNQSLLDNL 356
            LLG C  +    L+V  ++ +  L + +
Sbjct: 90  SLLGICLRSEGSPLVVLPYMKHGDLRNFI 118

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 63.8 bits (156), Expect = 1e-11
 Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 9/91 (9%)

Query: 275 NKLGQGGSGSVYKGTLPGGE------AVAVKRLFYNTTQW-VDHFFNEVNLISGI-NHKN 326
             LG+G  G V +    G +       VAVK L    T        +E+ ++  I +H N
Sbjct: 33  KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 92

Query: 327 LVKLLG-CSITGPESLLVYEFVPNQSLLDNL 356
           +V LLG C+  G   +++ EF    +L   L
Sbjct: 93  VVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 123

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 63.4 bits (155), Expect = 2e-11
 Identities = 23/87 (26%), Positives = 36/87 (41%), Gaps = 8/87 (9%)

Query: 276 KLGQGGSGSVYKGTLPGGEA---VAVKRLFYNTT--QWVDHFFNEVNLISGINHKNLVKL 330
           +LG G  G+V KG     +    VAVK L          D    E N++  +++  +V++
Sbjct: 24  ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 83

Query: 331 LG-CSITGPESLLVYEFVPNQSLLDNL 356
           +G C       +LV E      L   L
Sbjct: 84  IGIC--EAESWMLVMEMAELGPLNKYL 108

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 63.6 bits (155), Expect = 2e-11
 Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 8/87 (9%)

Query: 275 NKLGQGGSGSVYKGTLPGGE----AVAVKRL--FYNTTQWVDHFFNEVNLISGINHKNLV 328
             +G+G  G VY GTL   +      AVK L    +  +    F  E  ++   +H N++
Sbjct: 95  EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHPNVL 153

Query: 329 KLLG-CSITGPESLLVYEFVPNQSLLD 354
            LLG C  +    L+V  ++ +  L +
Sbjct: 154 SLLGICLRSEGSPLVVLPYMKHGDLRN 180

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 63.5 bits (155), Expect = 2e-11
 Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 10/92 (10%)

Query: 275 NKLGQGGSGSVYKGTLPGGE--------AVAVKRLFYNTTQW-VDHFFNEVNLISGI-NH 324
             LG+G  G V      G +         VAVK L  + T+  +    +E+ ++  I  H
Sbjct: 41  KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100

Query: 325 KNLVKLLGCSITGPESLLVYEFVPNQSLLDNL 356
           KN++ LLG         ++ E+    +L + L
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYL 132

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 63.1 bits (154), Expect = 2e-11
 Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 7/88 (7%)

Query: 275 NKLGQGGSGSVYKGTL--PGGEA---VAVKRLFYNTTQWV-DHFFNEVNLISGINHKNLV 328
             LG G  G+VYKG     G +    VA+K L   T+        +E  +++ +++ ++ 
Sbjct: 21  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80

Query: 329 KLLGCSITGPESLLVYEFVPNQSLLDNL 356
           +LLG         L+ + +P   LLD +
Sbjct: 81  RLLGI-CLTSTVQLITQLMPFGCLLDYV 107

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 63.0 bits (154), Expect = 2e-11
 Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 10/91 (10%)

Query: 275 NKLGQGGSGSVYKGTLPGGEA------VAVKRLFYNTTQW-VDHFFNEVNLISGI-NHKN 326
             LG G  G V + T  G         VAVK L  +      +   +E+ ++S + NH N
Sbjct: 29  KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN 88

Query: 327 LVKLLG-CSITGPESLLVYEFVPNQSLLDNL 356
           +V LLG C+I GP +L++ E+     LL+ L
Sbjct: 89  IVNLLGACTIGGP-TLVITEYCCYGDLLNFL 118

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 63.4 bits (155), Expect = 2e-11
 Identities = 24/84 (28%), Positives = 36/84 (42%), Gaps = 4/84 (4%)

Query: 276 KLGQGGSGSVYKGTLPGGE-AVAVKRLFYNTT-QWVDHFFNEVNLISGINHKNLVKLLG- 332
           ++G+G  G V+ G L      VAVK             F  E  ++   +H N+V+L+G 
Sbjct: 121 QIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGV 180

Query: 333 CSITGPESLLVYEFVPNQSLLDNL 356
           C+   P   +V E V     L  L
Sbjct: 181 CTQKQP-IYIVMELVQGGDFLTFL 203

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 64.1 bits (156), Expect = 2e-11
 Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 2/82 (2%)

Query: 275 NKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCS 334
            KLGQG  G V+ GT  G   VA+K L   T    + F  E  ++  + H+ LV+L    
Sbjct: 273 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAV- 330

Query: 335 ITGPESLLVYEFVPNQSLLDNL 356
           ++     +V E++   SLLD L
Sbjct: 331 VSEEPIYIVTEYMSKGSLLDFL 352

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 63.2 bits (154), Expect = 3e-11
 Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 10/92 (10%)

Query: 275 NKLGQGGSGSVYKGTLPGGE--------AVAVKRLFYNTTQW-VDHFFNEVNLISGI-NH 324
             LG+G  G V      G +         VAVK L  + T+  +    +E+ ++  I  H
Sbjct: 75  KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 134

Query: 325 KNLVKLLGCSITGPESLLVYEFVPNQSLLDNL 356
           KN++ LLG         ++ E+    +L + L
Sbjct: 135 KNIINLLGACTQDGPLYVIVEYASKGNLREYL 166

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 63.2 bits (154), Expect = 3e-11
 Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 2/82 (2%)

Query: 275 NKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCS 334
            KLGQG  G V+ GT  G   VA+K L   T    + F  E  ++  + H+ LV+L    
Sbjct: 190 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQLYAV- 247

Query: 335 ITGPESLLVYEFVPNQSLLDNL 356
           ++     +V E++   SLLD L
Sbjct: 248 VSEEPIYIVTEYMSKGSLLDFL 269

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 62.3 bits (152), Expect = 4e-11
 Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 7/88 (7%)

Query: 275 NKLGQGGSGSVYKGTL--PGGEA---VAVKRL-FYNTTQWVDHFFNEVNLISGINHKNLV 328
             LG G  G+V+KG     G      V +K +   +  Q      + +  I  ++H ++V
Sbjct: 19  KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78

Query: 329 KLLGCSITGPESLLVYEFVPNQSLLDNL 356
           +LLG    G    LV +++P  SLLD++
Sbjct: 79  RLLGL-CPGSSLQLVTQYLPLGSLLDHV 105

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 62.8 bits (153), Expect = 4e-11
 Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 10/92 (10%)

Query: 275 NKLGQGGSGSVYKGTLPGGE--------AVAVKRLFYNTTQW-VDHFFNEVNLISGI-NH 324
             LG+G  G V      G +         VAVK L  + T+  +    +E+ ++  I  H
Sbjct: 87  KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 146

Query: 325 KNLVKLLGCSITGPESLLVYEFVPNQSLLDNL 356
           KN++ LLG         ++ E+    +L + L
Sbjct: 147 KNIINLLGACTQDGPLYVIVEYASKGNLREYL 178

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 61.9 bits (151), Expect = 5e-11
 Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 1/81 (1%)

Query: 277 LGQGGSGSVYKGT-LPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSI 335
           LG+G  G VY G  L     +A+K +    +++      E+ L   + HKN+V+ LG   
Sbjct: 30  LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89

Query: 336 TGPESLLVYEFVPNQSLLDNL 356
                 +  E VP  SL   L
Sbjct: 90  ENGFIKIFMEQVPGGSLSALL 110

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 61.9 bits (151), Expect = 5e-11
 Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 10/91 (10%)

Query: 275 NKLGQGGSGSVYKGTLPGGE------AVAVKRLFYNTTQW-VDHFFNEVNLISGI-NHKN 326
             LG G  G V + T  G         VAVK L         +   +E+ ++S +  H+N
Sbjct: 52  KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111

Query: 327 LVKLLG-CSITGPESLLVYEFVPNQSLLDNL 356
           +V LLG C+  GP  L++ E+     LL+ L
Sbjct: 112 IVNLLGACTHGGP-VLVITEYCCYGDLLNFL 141

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 61.5 bits (150), Expect = 7e-11
 Identities = 33/89 (37%), Positives = 45/89 (50%), Gaps = 10/89 (11%)

Query: 276 KLGQGGSGSVYKGTL--PGGEA--VAVKRL---FYNTTQWVDHFFNEVNLISGINHKNLV 328
           KLG G  G V +G    P G+   VAVK L     +  + +D F  EVN +  ++H+NL+
Sbjct: 25  KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 84

Query: 329 KLLG-CSITGPESLLVYEFVPNQSLLDNL 356
           +L G      P   +V E  P  SLLD L
Sbjct: 85  RLYGVV--LTPPMKMVTELAPLGSLLDRL 111

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 61.1 bits (149), Expect = 8e-11
 Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 8/87 (9%)

Query: 276 KLGQGGSGSVYKGTLPGGEA----VAVKRLFYNTTQW-VDHFFNEVNLISGINHKNLVKL 330
            LG+G  G VY+G     +     VAVK    + T    + F +E  ++  ++H ++VKL
Sbjct: 19  ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 78

Query: 331 LG-CSITGPESLLVYEFVPNQSLLDNL 356
           +G        + ++ E  P   L   L
Sbjct: 79  IGII--EEEPTWIIMELYPYGELGHYL 103

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 60.7 bits (148), Expect = 9e-11
 Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 6/86 (6%)

Query: 276 KLGQGGSGSVYKGTL--PGGE--AVAVKRLFYNTT-QWVDHFFNEVNLISGINHKNLVKL 330
            +G+G  G V++G    P     AVA+K     T+    + F  E   +   +H ++VKL
Sbjct: 22  CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 81

Query: 331 LGCSITGPESLLVYEFVPNQSLLDNL 356
           +G  IT     ++ E      L   L
Sbjct: 82  IGV-ITENPVWIIMELCTLGELRSFL 106

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 61.4 bits (149), Expect = 2e-10
 Identities = 23/87 (26%), Positives = 36/87 (41%), Gaps = 8/87 (9%)

Query: 276 KLGQGGSGSVYKGTL--PGGEA--VAVKRLFYNTT--QWVDHFFNEVNLISGINHKNLVK 329
            +G+G  G V++G    P   A  VA+K     T+       F  E   +   +H ++VK
Sbjct: 397 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREK-FLQEALTMRQFDHPHIVK 455

Query: 330 LLGCSITGPESLLVYEFVPNQSLLDNL 356
           L+G  IT     ++ E      L   L
Sbjct: 456 LIGV-ITENPVWIIMELCTLGELRSFL 481

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 61.1 bits (148), Expect = 2e-10
 Identities = 21/85 (24%), Positives = 35/85 (41%), Gaps = 5/85 (5%)

Query: 276 KLGQGGSGSVYKGTLPGGEA---VAVKRLFYNTT-QWVDHFFNEVNLISGINHKNLVKLL 331
           +LG G  GSV +G     +    VA+K L   T     +    E  ++  +++  +V+L+
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 402

Query: 332 GCSITGPESLLVYEFVPNQSLLDNL 356
           G        +LV E      L   L
Sbjct: 403 GV-CQAEALMLVMEMAGGGPLHKFL 426

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 59.2 bits (144), Expect = 3e-10
 Identities = 21/85 (24%), Positives = 35/85 (41%), Gaps = 5/85 (5%)

Query: 276 KLGQGGSGSVYKGTLPGGE---AVAVKRLFYNTT-QWVDHFFNEVNLISGINHKNLVKLL 331
           +LG G  GSV +G     +    VA+K L   T     +    E  ++  +++  +V+L+
Sbjct: 17  ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 76

Query: 332 GCSITGPESLLVYEFVPNQSLLDNL 356
           G        +LV E      L   L
Sbjct: 77  GV-CQAEALMLVMEMAGGGPLHKFL 100

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 59.6 bits (145), Expect = 3e-10
 Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 10/89 (11%)

Query: 276 KLGQGGSGSVYKGTL--PGGEA---VAVKRLFYNTT--QWVDHFFNEVNLISGINHKNLV 328
            +G G  G VYKG L    G+    VA+K L    T  Q VD F  E  ++   +H N++
Sbjct: 51  VIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVD-FLGEAGIMGQFSHHNII 109

Query: 329 KLLG-CSITGPESLLVYEFVPNQSLLDNL 356
           +L G  S   P  +++ E++ N +L   L
Sbjct: 110 RLEGVISKYKP-MMIITEYMENGALDKFL 137

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 59.3 bits (144), Expect = 5e-10
 Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 7/88 (7%)

Query: 275 NKLGQGGSGSVYKGTL--PGGE--AVAVKRLFYNTT--QWVDHFFNEVNLISGINHKNLV 328
             +G G  G V  G L  P  +  +VA+K L    T  Q  D F  E +++   +H N++
Sbjct: 51  KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD-FLGEASIMGQFDHPNII 109

Query: 329 KLLGCSITGPESLLVYEFVPNQSLLDNL 356
           +L G        ++V E++ N SL   L
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFL 137

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 59.0 bits (143), Expect = 6e-10
 Identities = 21/121 (17%), Positives = 45/121 (37%), Gaps = 6/121 (4%)

Query: 237 QKRRERKQLGALQVAVNKSKLNFSYETLEKATNYFHESNKLGQGGSGSVYKGT-LPGGEA 295
           + +R   +    +  +   KL        +  ++     ++G+G  G V++      G  
Sbjct: 26  KLQRLGPETEDNEGVLLTEKLKPVDYEYREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQ 85

Query: 296 VAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQSLLDN 355
            AVK++     +       E+   +G++   +V L G    GP   +  E +   SL   
Sbjct: 86  CAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQL 140

Query: 356 L 356
           +
Sbjct: 141 I 141

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 58.5 bits (142), Expect = 6e-10
 Identities = 22/108 (20%), Positives = 43/108 (39%), Gaps = 5/108 (4%)

Query: 254 KSKLNFSYETLEKATNYFHESNKLGQGGSGSVYKGT-LPGGEAVAVKRLFYNTTQWVDHF 312
           +  L F    +     ++    KLG+GG   V     L  G   A+KR+  +  Q  +  
Sbjct: 14  RENLYFQGHMVIIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEA 73

Query: 313 FNEVNLISGINHKNLVKLLGCSITGPES----LLVYEFVPNQSLLDNL 356
             E ++    NH N+++L+   +    +     L+  F    +L + +
Sbjct: 74  QREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEI 121

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 58.9 bits (143), Expect = 6e-10
 Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 7/88 (7%)

Query: 275 NKLGQGGSGSVYKGTL--PGGE--AVAVKRLFYNTT--QWVDHFFNEVNLISGINHKNLV 328
             +G G SG V  G L  PG     VA+K L    T  Q  D F +E +++   +H N++
Sbjct: 55  KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRD-FLSEASIMGQFDHPNII 113

Query: 329 KLLGCSITGPESLLVYEFVPNQSLLDNL 356
           +L G    G  +++V E++ N SL   L
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTFL 141

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 58.5 bits (142), Expect = 7e-10
 Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 1/88 (1%)

Query: 268 TNYFHESNKLGQGGSGSVYKGT-LPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKN 326
              +    K+GQG SG+VY    +  G+ VA++++        +   NE+ ++    + N
Sbjct: 19  KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 78

Query: 327 LVKLLGCSITGPESLLVYEFVPNQSLLD 354
           +V  L   + G E  +V E++   SL D
Sbjct: 79  IVNYLDSYLVGDELWVVMEYLAGGSLTD 106

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 58.5 bits (142), Expect = 7e-10
 Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 1/88 (1%)

Query: 268 TNYFHESNKLGQGGSGSVYKGT-LPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKN 326
                   K+G+G +G V        G  VAVK +     Q  +  FNEV ++    H N
Sbjct: 44  RLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFN 103

Query: 327 LVKLLGCSITGPESLLVYEFVPNQSLLD 354
           +V++    + G E  ++ EF+   +L D
Sbjct: 104 VVEMYKSYLVGEELWVLMEFLQGGALTD 131

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 58.1 bits (141), Expect = 9e-10
 Identities = 18/92 (19%), Positives = 38/92 (41%), Gaps = 7/92 (7%)

Query: 270 YFHESNKLGQGGSGSVYKGT-LPGGEAVAVK--RLFYNTTQWVDHFFNEVNLISGINHKN 326
           +     ++G+G   +VYKG        VA    +    T      F  E  ++ G+ H N
Sbjct: 27  FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPN 86

Query: 327 LVKLLGC---SITGPESLLVY-EFVPNQSLLD 354
           +V+       ++ G + +++  E + + +L  
Sbjct: 87  IVRFYDSWESTVKGKKCIVLVTELMTSGTLKT 118

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 56.6 bits (137), Expect = 3e-09
 Identities = 27/124 (21%), Positives = 50/124 (40%), Gaps = 13/124 (10%)

Query: 232 RRKLLQKRRERKQLGALQVAVNKSKLNFSYETLEKATNYFHESNKLGQGGSGSVYKGT-L 290
              +  +   R+QL  L       +    ++ LEK          LG+G  GSVYK    
Sbjct: 2   LETVQLRNPPRRQLKKLDEDSLTKQPEEVFDVLEK----------LGEGSYGSVYKAIHK 51

Query: 291 PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQ 350
             G+ VA+K++       +     E++++   +  ++VK  G      +  +V E+    
Sbjct: 52  ETGQIVAIKQV--PVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAG 109

Query: 351 SLLD 354
           S+ D
Sbjct: 110 SVSD 113

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 54.2 bits (131), Expect = 2e-08
 Identities = 20/85 (23%), Positives = 39/85 (45%), Gaps = 1/85 (1%)

Query: 271 FHESNKLGQGGSGSVYKGT-LPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVK 329
           +    +LG G  G VYK      G   A K +   + + ++ +  E+ +++  +H  +VK
Sbjct: 21  WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVK 80

Query: 330 LLGCSITGPESLLVYEFVPNQSLLD 354
           LLG      +  ++ EF P  ++  
Sbjct: 81  LLGAYYHDGKLWIMIEFCPGGAVDA 105

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 54.3 bits (131), Expect = 2e-08
 Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 2/81 (2%)

Query: 276 KLGQGGSGSVYKGT-LPGGEAVAVKRL-FYNTTQWVDHFFNEVNLISGINHKNLVKLLGC 333
            +G G +  V      P  E VA+KR+        +D    E+  +S  +H N+V     
Sbjct: 22  VIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTS 81

Query: 334 SITGPESLLVYEFVPNQSLLD 354
            +   E  LV + +   S+LD
Sbjct: 82  FVVKDELWLVMKLLSGGSVLD 102

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 53.9 bits (130), Expect = 2e-08
 Identities = 19/86 (22%), Positives = 40/86 (46%), Gaps = 2/86 (2%)

Query: 271 FHESNKLGQGGSGSVYKGT-LPGGEAVAVKRLFYNTTQ-WVDHFFNEVNLISGINHKNLV 328
           F +  K+G+G  G V+KG      + VA+K +     +  ++    E+ ++S  +   + 
Sbjct: 24  FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83

Query: 329 KLLGCSITGPESLLVYEFVPNQSLLD 354
           K  G  +   +  ++ E++   S LD
Sbjct: 84  KYYGSYLKDTKLWIIMEYLGGGSALD 109

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 54.0 bits (130), Expect = 2e-08
 Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 14/111 (12%)

Query: 253 NKSKLNFSYETLEKATNYFHESNKLGQGGSGSVYKGT-LPGGEAVAVKRLF-YNTTQWVD 310
           ++S  N  +   +           LGQG + +V++G     G+  A+K     +  + VD
Sbjct: 3   SQSTSNHLWLLSDI----------LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVD 52

Query: 311 HFFNEVNLISGINHKNLVKLLGC--SITGPESLLVYEFVPNQSLLDNLFDK 359
               E  ++  +NHKN+VKL       T    +L+ EF P  SL   L + 
Sbjct: 53  VQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEP 103

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 54.1 bits (130), Expect = 2e-08
 Identities = 22/85 (25%), Positives = 34/85 (40%), Gaps = 5/85 (5%)

Query: 275 NKLGQGGS--GSVYKGT-LPGGEAVAVKR--LFYNTTQWVDHFFNEVNLISGINHKNLVK 329
             +G+G     +V      P GE V V+R  L   + + V     E+++    NH N+V 
Sbjct: 31  TVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVP 90

Query: 330 LLGCSITGPESLLVYEFVPNQSLLD 354
                I   E  +V  F+   S  D
Sbjct: 91  YRATFIADNELWVVTSFMAYGSAKD 115

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 53.7 bits (129), Expect = 3e-08
 Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 14/111 (12%)

Query: 253 NKSKLNFSYETLEKATNYFHESNKLGQGGSGSVYKGT-LPGGEAVAVKRLF-YNTTQWVD 310
           ++S  N  +   +           LGQG + +V++G     G+  A+K     +  + VD
Sbjct: 3   SQSTSNHLWLLSDI----------LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVD 52

Query: 311 HFFNEVNLISGINHKNLVKLLGC--SITGPESLLVYEFVPNQSLLDNLFDK 359
               E  ++  +NHKN+VKL       T    +L+ EF P  SL   L + 
Sbjct: 53  VQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEP 103

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 53.4 bits (128), Expect = 4e-08
 Identities = 27/95 (28%), Positives = 40/95 (42%), Gaps = 9/95 (9%)

Query: 275 NKLGQGGSGSVYKGTLPG------GEAVAVKRLFYNTTQW-VDHFFNEVNLISGI-NHKN 326
             LG+G  G V +    G         VAVK L    T        +E+ ++  I +H N
Sbjct: 28  KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 87

Query: 327 LVKLLG-CSITGPESLLVYEFVPNQSLLDNLFDKM 360
           +V LLG C+  G   +++ EF    +L   L  K 
Sbjct: 88  VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKR 122

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 53.7 bits (129), Expect = 4e-08
 Identities = 17/81 (20%), Positives = 34/81 (41%), Gaps = 4/81 (4%)

Query: 271 FHESNKLGQGGSGSVYKGTLPGGEAVAVKR--LFYNTTQWVDHFFNEVNLISGINHKNL- 327
           +    ++G GGS  V++      +  A+K   L     Q +D + NE+  ++ +   +  
Sbjct: 58  YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 117

Query: 328 -VKLLGCSITGPESLLVYEFV 347
            ++L    IT     +V E  
Sbjct: 118 IIRLYDYEITDQYIYMVMECG 138

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 52.3 bits (126), Expect = 7e-08
 Identities = 19/103 (18%), Positives = 41/103 (39%), Gaps = 4/103 (3%)

Query: 249 QVAVNKSKLNFSYETLEKATNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKR--LFYNTT 306
              V+    N  ++++      +    ++G GGS  V++      +  A+K   L     
Sbjct: 8   SSGVDLGTENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADN 67

Query: 307 QWVDHFFNEVNLISGINHKNL--VKLLGCSITGPESLLVYEFV 347
           Q +D + NE+  ++ +   +   ++L    IT     +V E  
Sbjct: 68  QTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECG 110

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 51.6 bits (124), Expect = 1e-07
 Identities = 17/105 (16%), Positives = 41/105 (39%), Gaps = 7/105 (6%)

Query: 251 AVNKSKLNFSYETLEKATNYFHESNKLGQGGSGSVYKGT-LPGGEAVAVKRLFYN--TTQ 307
            V+    N  ++++EK    +    K+G+G  G          G    +K +  +  +++
Sbjct: 10  GVDLGTENLYFQSMEK----YVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSK 65

Query: 308 WVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQSL 352
             +    EV +++ + H N+V+            +V ++     L
Sbjct: 66  EREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDL 110

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 51.2 bits (123), Expect = 2e-07
 Identities = 17/81 (20%), Positives = 34/81 (41%), Gaps = 4/81 (4%)

Query: 271 FHESNKLGQGGSGSVYKGTLPGGEAVAVKR--LFYNTTQWVDHFFNEVNLISGINHKNL- 327
           +    ++G GGS  V++      +  A+K   L     Q +D + NE+  ++ +   +  
Sbjct: 11  YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 70

Query: 328 -VKLLGCSITGPESLLVYEFV 347
            ++L    IT     +V E  
Sbjct: 71  IIRLYDYEITDQYIYMVMECG 91

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 51.1 bits (122), Expect = 2e-07
 Identities = 18/131 (13%), Positives = 35/131 (26%), Gaps = 7/131 (5%)

Query: 231 VRRKLLQKRRER-KQLGALQVAVNKSKLNFSYETLEKATNYFHESNKLGQGGSGSVYKGT 289
           +  KLL    +             K          +  +   +  + LG+G    VY+ T
Sbjct: 26  LIFKLLSGLSKPVSSYPNTFEWQCKLPAIKPKTEFQLGSKLVYVHHLLGEGAFAQVYEAT 85

Query: 290 LPG------GEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLV 343
                     +   +K                +  +        +K     +    S+LV
Sbjct: 86  QGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLV 145

Query: 344 YEFVPNQSLLD 354
            E     +LL+
Sbjct: 146 GELYSYGTLLN 156

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 50.5 bits (121), Expect = 3e-07
 Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 4/80 (5%)

Query: 271 FHESNKLGQGGSGSVYKGT-LPGGEAVAVKRLFYNTTQWVDHFF---NEVNLISGINHKN 326
           F +  ++G G  G+VY    +   E VA+K++ Y+  Q  + +     EV  +  + H N
Sbjct: 56  FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115

Query: 327 LVKLLGCSITGPESLLVYEF 346
            ++  GC +    + LV E+
Sbjct: 116 TIQYRGCYLREHTAWLVMEY 135

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 48.7 bits (116), Expect = 1e-06
 Identities = 25/113 (22%), Positives = 40/113 (35%), Gaps = 6/113 (5%)

Query: 253 NKSKLNFSYETLEKATNYFHESNKLGQGGSGSVYKGT-LPGGEAVAVK-----RLFYNTT 306
            +  L F   +L +    +H    +GQG  G V            A+K     ++     
Sbjct: 10  GRENLYFQGGSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINP 69

Query: 307 QWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQSLLDNLFDK 359
           + V+    EV L+  ++H N+ +L           LV E      LLD L   
Sbjct: 70  KDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVF 122

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 47.7 bits (114), Expect = 2e-06
 Identities = 16/84 (19%), Positives = 32/84 (38%), Gaps = 4/84 (4%)

Query: 277 LGQGGSGSVYKGT-LPGGEAVAVKRLF---YNTTQWVDHFFNEVNLISGINHKNLVKLLG 332
           LG+GG    ++ +     E  A K +           +    E+++   + H+++V   G
Sbjct: 49  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108

Query: 333 CSITGPESLLVYEFVPNQSLLDNL 356
                    +V E    +SLL+  
Sbjct: 109 FFEDNDFVFVVLELCRRRSLLELH 132

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 46.4 bits (111), Expect = 5e-06
 Identities = 16/83 (19%), Positives = 34/83 (40%), Gaps = 6/83 (7%)

Query: 277 LGQGGSGSVYKGT-LPGGEAVAVKRLF---YNTTQWVDHFFNEVNLISGINHKNLVKLLG 332
           LG+GG    ++ +     E  A K +           +    E+++   + H+++V   G
Sbjct: 23  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82

Query: 333 CSITGPESL-LVYEFVPNQSLLD 354
                 + + +V E    +SLL+
Sbjct: 83  F-FEDNDFVFVVLELCRRRSLLE 104

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 46.6 bits (111), Expect = 5e-06
 Identities = 16/84 (19%), Positives = 31/84 (36%), Gaps = 2/84 (2%)

Query: 271 FHESNKLGQGGSGSVYKGT-LPGGEAVAVKRLFYNTTQW-VDHFFNEVNLISGINHKNLV 328
           F     LG+GG G V++          A+KR+     +   +    EV  ++ + H  +V
Sbjct: 7   FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIV 66

Query: 329 KLLGCSITGPESLLVYEFVPNQSL 352
           +     +    +  +    P   L
Sbjct: 67  RYFNAWLEKNTTEKLQPSSPKVYL 90

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 46.7 bits (111), Expect = 7e-06
 Identities = 27/97 (27%), Positives = 37/97 (38%), Gaps = 11/97 (11%)

Query: 269 NYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVN-LISGINHKNL 327
           N       LG G SG+V       G  VAVKR+      + D    E+  L    +H N+
Sbjct: 15  NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRM---LIDFCDIALMEIKLLTESDDHPNV 71

Query: 328 VKLLGCSITGPESL-LVYEFVPNQSLLDNLFDKMLSP 363
           ++   CS T    L +  E         NL D + S 
Sbjct: 72  IRYY-CSETTDRFLYIALELCNL-----NLQDLVESK 102

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 45.8 bits (109), Expect = 9e-06
 Identities = 21/98 (21%), Positives = 39/98 (39%), Gaps = 15/98 (15%)

Query: 271 FHESNKLGQGGSGSVYKGT-LPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVK 329
           F E   LGQG  G V K          A+K++ +   + +    +EV L++ +NH+ +V+
Sbjct: 8   FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEK-LSTILSEVMLLASLNHQYVVR 66

Query: 330 LLGC----------SITGPESLLVY---EFVPNQSLLD 354
                              +   ++   E+  N +L D
Sbjct: 67  YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYD 104

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 45.8 bits (109), Expect = 9e-06
 Identities = 25/103 (24%), Positives = 41/103 (39%), Gaps = 8/103 (7%)

Query: 258 NFSYETLEKATNYFHESNKLGQGGSGSVYKGT-LPGGEAVAVKRLFYN---TTQWVDHFF 313
           +  Y TL      F    K+G+G    VY+   L  G  VA+K++        +      
Sbjct: 25  DMGYNTLAN----FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCI 80

Query: 314 NEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQSLLDNL 356
            E++L+  +NH N++K     I   E  +V E      L   +
Sbjct: 81  KEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMI 123

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 45.2 bits (108), Expect = 1e-05
 Identities = 20/84 (23%), Positives = 32/84 (38%), Gaps = 4/84 (4%)

Query: 277 LGQGGSGSVYKGT-LPGGEAVAVKRLFYNT---TQWVDHFFNEVNLISGINHKNLVKLLG 332
           LG+G    VY+   +  G  VA+K +          V    NEV +   + H ++++L  
Sbjct: 19  LGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYN 78

Query: 333 CSITGPESLLVYEFVPNQSLLDNL 356
                    LV E   N  +   L
Sbjct: 79  YFEDSNYVYLVLEMCHNGEMNRYL 102

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 45.4 bits (108), Expect = 1e-05
 Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 5/88 (5%)

Query: 271 FHESNKLGQGGSGSVYKGT-LPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVK 329
           F E   +G GG G V+K      G+   +KR+ YN     +    EV  ++ ++H N+V 
Sbjct: 13  FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVH 68

Query: 330 LLGCSITGPESLLVYEFVPNQSLLDNLF 357
             GC               ++S    LF
Sbjct: 69  YNGCWDGFDYDPETSSKNSSRSKTKCLF 96

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 45.5 bits (108), Expect = 1e-05
 Identities = 27/120 (22%), Positives = 47/120 (39%), Gaps = 9/120 (7%)

Query: 246 GALQVAVNKSKLNFSYETLEKATNYFHESNKLGQGGSGSVYKGT-LPGGEAVAVKRLFYN 304
           G+L  A  + + +F  +T+E           L +GG   VY+   +  G   A+KRL  N
Sbjct: 5   GSLGGASGRDQSDFVGQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSN 64

Query: 305 TTQWVDHFFNEVNLISGI-NHKNLVKLLGCSITGPES-------LLVYEFVPNQSLLDNL 356
             +       EV  +  +  H N+V+    +  G E         L+   +    L++ L
Sbjct: 65  EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFL 124

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 45.1 bits (107), Expect = 2e-05
 Identities = 25/110 (22%), Positives = 40/110 (36%), Gaps = 9/110 (8%)

Query: 253 NKSKLNFSYETLEKATNYFHESNKLGQGGSGSVYKGT-LPGGEAVAVKRLFYNTTQWVDH 311
            +S        L      F     +G G  G VYKG  +  G+  A+K +     +  + 
Sbjct: 8   ARSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEE- 66

Query: 312 FFNEVNLISGI-NHKNLVKLLGCSITGPESL------LVYEFVPNQSLLD 354
              E+N++    +H+N+    G  I            LV EF    S+ D
Sbjct: 67  IKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTD 116

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 45.3 bits (107), Expect = 2e-05
 Identities = 18/95 (18%), Positives = 34/95 (35%), Gaps = 2/95 (2%)

Query: 271 FHESNKLGQGGSGSVYKGT-LPGGEAVAVKRL-FYNTTQWVDHFFNEVNLISGINHKNLV 328
           F     +G+GG G V++          A+KR+   N     +    EV  ++ + H  +V
Sbjct: 8   FEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIV 67

Query: 329 KLLGCSITGPESLLVYEFVPNQSLLDNLFDKMLSP 363
           +     +  P      E        ++    + SP
Sbjct: 68  RYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSP 102

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 45.1 bits (106), Expect = 2e-05
 Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 8/87 (9%)

Query: 276 KLGQGGSGSVYKGT-LPGGEAVAVKRL-FYNTTQWVDHFFNEVNLISGINHKNLVKLL-- 331
           +LG GG G V +      GE VA+K+     + +  + +  E+ ++  +NH N+V     
Sbjct: 21  RLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREV 80

Query: 332 ----GCSITGPESLLVYEFVPNQSLLD 354
                        LL  E+     L  
Sbjct: 81  PDGLQKLAPNDLPLLAMEYCEGGDLRK 107

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 45.1 bits (107), Expect = 2e-05
 Identities = 17/99 (17%), Positives = 32/99 (32%), Gaps = 3/99 (3%)

Query: 237 QKRRERKQLGALQVAVNKSKLNFSYETLEKATNYFHESNKLGQGGSGSVYKGT-LPGGEA 295
                 ++    Q  +  +   F        +  +    KLG G  G V           
Sbjct: 5   HHHSSGRENLYFQGDLQATPGMFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVE 64

Query: 296 VAVKRL--FYNTTQWVDHFFNEVNLISGINHKNLVKLLG 332
            A+K +     +T        EV ++  ++H N++KL  
Sbjct: 65  RAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYD 103

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.8 bits (105), Expect = 3e-05
 Identities = 49/340 (14%), Positives = 92/340 (27%), Gaps = 101/340 (29%)

Query: 76  DDYDFFNESLSSQDRTVCGSKD--------FGGNNTVFGA---NAIELVRNLSVQAVKND 124
            +Y F    + ++ R                  +N VF     + ++    L  QA+   
Sbjct: 89  INYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLR-QALLEL 147

Query: 125 GFFVGSVTFSKGNVSVHGLAQCWEFVNGSACENCLENAVSRIASCTQKEEGRV--LNAGC 182
                       NV + G+        G   +  +   V        K + ++  LN   
Sbjct: 148 R--------PAKNVLIDGVLGS-----G---KTWVALDVCLSYKVQCKMDFKIFWLNLKN 191

Query: 183 YLRYST-----QRFYNNSGPD-----------PVPGNGGDNKLAVILATSA-VALLLVFS 225
                T     Q+      P+            +  +    +L  +L +      LLV  
Sbjct: 192 CNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLL 251

Query: 226 LV-------AFFVRRKLLQKRRERK---QLGAL---QVAVNKSKLNFSYETLEKATNYFH 272
            V       AF +  K+L   R ++    L A     ++++   +     T ++  +   
Sbjct: 252 NVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTL---TPDEVKSLL- 307

Query: 273 ESNKLGQGGSGSVYKGTLPGGEAV-----------AVKRLFYNTTQWVDHFFNEVNLISG 321
               L            LP  E +              R    T     H          
Sbjct: 308 -LKYLDCR------PQDLP-REVLTTNPRRLSIIAESIRDGLATWDNWKH---------- 349

Query: 322 INHKNLVKLLGCSITGPESLLVYEFVPNQSLLDNL--FDK 359
           +N   L  ++  S+     L   E+   + + D L  F  
Sbjct: 350 VNCDKLTTIIESSL---NVLEPAEY---RKMFDRLSVFPP 383

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 43.7 bits (104), Expect = 5e-05
 Identities = 19/90 (21%), Positives = 41/90 (45%), Gaps = 10/90 (11%)

Query: 275 NKLGQGGSGSVYKGT-LPGGEAVAVKRLFYNTTQWVDHFFN-----EVNLISGINHKNLV 328
           + LG+G   +VYK       + VA+K++            N     E+ L+  ++H N++
Sbjct: 16  DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 75

Query: 329 KLLGCSITGPESL-LVYEFVPN--QSLLDN 355
            LL        ++ LV++F+    + ++ +
Sbjct: 76  GLLDA-FGHKSNISLVFDFMETDLEVIIKD 104

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 43.9 bits (104), Expect = 5e-05
 Identities = 17/83 (20%), Positives = 32/83 (38%), Gaps = 5/83 (6%)

Query: 253 NKSKLNFSYETLEKATNYFHESNKLGQGGSGSVYKGT-LPGGEAVAVKRL--FYNTTQWV 309
           +  + N  ++        ++    LG+G  G V K       +  AVK +       +  
Sbjct: 8   SSGRENLYFQ--GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDT 65

Query: 310 DHFFNEVNLISGINHKNLVKLLG 332
                EV L+  ++H N++KL  
Sbjct: 66  STILREVELLKKLDHPNIMKLFE 88

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 43.5 bits (103), Expect = 5e-05
 Identities = 23/90 (25%), Positives = 36/90 (40%), Gaps = 4/90 (4%)

Query: 271 FHESNKLGQGGSGSVYKGT-LPGGEAVAVKR--LFYNTTQWVDHFFNEVNLISGI-NHKN 326
           FHE  K+G G  GSV+K      G   A+KR       +    +   EV   + +  H +
Sbjct: 13  FHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSH 72

Query: 327 LVKLLGCSITGPESLLVYEFVPNQSLLDNL 356
           +V+           L+  E+    SL D +
Sbjct: 73  VVRYFSAWAEDDHMLIQNEYCNGGSLADAI 102

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 42.9 bits (102), Expect = 7e-05
 Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 18/97 (18%)

Query: 275 NKLGQGGSGSVYKGTLPGGEAVAVKRL--------FYNTTQWVDHFFNEVNLISGINHKN 326
            K+G+G  G VYK     G  VA+KR+          +T         E++L+  ++H N
Sbjct: 27  EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTA------IREISLLKELHHPN 80

Query: 327 LVKLLGCSITGPESL-LVYEFVPN--QSLLDNLFDKM 360
           +V L+   I     L LV+EF+    + +LD     +
Sbjct: 81  IVSLIDV-IHSERCLTLVFEFMEKDLKKVLDENKTGL 116

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score = 42.9 bits (102), Expect = 7e-05
 Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 19/101 (18%)

Query: 275 NKLGQGGSGSVYKGT-LPGGEAVAVKRL--------FYNTTQWVDHFFNEVNLISGINHK 325
            K+G+G  G VYK      GE VA+K++          +T         E++L+  +NH 
Sbjct: 9   EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA------IREISLLKELNHP 62

Query: 326 NLVKLLGCSITGPESL-LVYEFVPN--QSLLDNLFDKMLSP 363
           N+VKLL   I     L LV+EF+    +  +D      +  
Sbjct: 63  NIVKLLDV-IHTENKLYLVFEFLHQDLKKFMDASALTGIPL 102

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 42.9 bits (102), Expect = 7e-05
 Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 12/90 (13%)

Query: 275 NKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFN-----EVNLISGINHKNLVK 329
            K+G+G  G VYK     GE  A+K++        D         E++++  + H N+VK
Sbjct: 8   EKIGEGTYGVVYKAQNNYGETFALKKIRLEKE---DEGIPSTTIREISILKELKHSNIVK 64

Query: 330 LLGCSITGPESL-LVYEFVPN--QSLLDNL 356
           L    I   + L LV+E +    + LLD  
Sbjct: 65  LYDV-IHTKKRLVLVFEHLDQDLKKLLDVC 93

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 43.7 bits (103), Expect = 8e-05
 Identities = 21/96 (21%), Positives = 40/96 (41%), Gaps = 1/96 (1%)

Query: 265 EKATNYFHESNKLGQGGSGSVYKGT-LPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGIN 323
           +   +++    +LG G  G V++ T    G   A K +        +    E+  +S + 
Sbjct: 153 DHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLR 212

Query: 324 HKNLVKLLGCSITGPESLLVYEFVPNQSLLDNLFDK 359
           H  LV L        E +++YEF+    L + + D+
Sbjct: 213 HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADE 248

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 43.5 bits (103), Expect = 8e-05
 Identities = 18/91 (19%), Positives = 36/91 (39%), Gaps = 4/91 (4%)

Query: 246 GALQVAVNKSKLNFSYETLEKATNYFHESNKLGQGGSGSVYKGT-LPGGEAVAVKRL--- 301
           G++   ++ +   F   +    ++ +     LG+G  G V        G+  AVK +   
Sbjct: 3   GSMMDHLHATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKR 62

Query: 302 FYNTTQWVDHFFNEVNLISGINHKNLVKLLG 332
                   +    EV L+  ++H N++KL  
Sbjct: 63  QVKQKTDKESLLREVQLLKQLDHPNIMKLYE 93

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 43.1 bits (102), Expect = 8e-05
 Identities = 25/111 (22%), Positives = 49/111 (44%), Gaps = 9/111 (8%)

Query: 250 VAVNKSKLNFSYETLEKATNYFHESNKLGQGGSGSVYKGT-LPGGEAVAVKRLFYNTTQW 308
           V   +  +N  Y           ++  LG G  G V+K      G  +A K +     + 
Sbjct: 78  VTAKQGAVNSFYT--------VSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKD 129

Query: 309 VDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQSLLDNLFDK 359
            +   NE+++++ ++H NL++L     +  + +LV E+V    L D + D+
Sbjct: 130 KEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDE 180

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 43.2 bits (102), Expect = 9e-05
 Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 13/81 (16%)

Query: 276 KLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFN-EVNLISGINHKNLVKLLGC 333
            +G G  G VY+  L   GE VA+K++  +       F N E+ ++  ++H N+V+L   
Sbjct: 61  VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIVRLRYF 115

Query: 334 SITGPESL------LVYEFVP 348
             +  E        LV ++VP
Sbjct: 116 FYSSGEKKDEVYLNLVLDYVP 136

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 42.6 bits (101), Expect = 1e-04
 Identities = 21/86 (24%), Positives = 34/86 (39%), Gaps = 4/86 (4%)

Query: 275 NKLGQGGSGSVYKGT-LPGGEAVAVKRLFYNT---TQWVDHFFNEVNLISGINHKNLVKL 330
             LG+G  G+VY          +A+K LF               EV + S + H N+++L
Sbjct: 15  RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 74

Query: 331 LGCSITGPESLLVYEFVPNQSLLDNL 356
            G         L+ E+ P  ++   L
Sbjct: 75  YGYFHDATRVYLILEYAPLGTVYREL 100

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 42.6 bits (101), Expect = 1e-04
 Identities = 24/109 (22%), Positives = 38/109 (34%), Gaps = 16/109 (14%)

Query: 271 FHESNKLGQGGSGSVYKGT-LPGGEAVAVKRLFYNTTQWVDHFFN-----EVNL---ISG 321
           +    ++G G  G+VYK      G  VA+K +                  EV L   +  
Sbjct: 11  YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEA 70

Query: 322 INHKNLVKLL----GCSITGPESL-LVYEFVPN--QSLLDNLFDKMLSP 363
             H N+V+L+             + LV+E V    ++ LD      L  
Sbjct: 71  FEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPA 119

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 42.0 bits (99), Expect = 1e-04
 Identities = 16/94 (17%), Positives = 32/94 (34%), Gaps = 9/94 (9%)

Query: 276 KLGQGGSGSVYKGT---LPGGEAVAVKRL---FYNTTQWVDHFFNEVNLISGINHKNLVK 329
             G       ++     L     VA+  +          +    +    +S I+   + +
Sbjct: 38  FHGGVPPLQFWQALDTAL--DRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVAR 95

Query: 330 LLGCSITGPESLLVYEFVPNQSLLDNLFDKMLSP 363
           +L    T    L+V E++   SL + + D   SP
Sbjct: 96  VLDVVHTRAGGLVVAEWIRGGSLQE-VADTSPSP 128

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 42.1 bits (99), Expect = 2e-04
 Identities = 19/95 (20%), Positives = 35/95 (36%), Gaps = 11/95 (11%)

Query: 271 FHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGIN-HKNLVK 329
           F   + LG G  G++    +     VAVKR+      + D    EV L+   + H N+++
Sbjct: 26  FCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFAD---REVQLLRESDEHPNVIR 82

Query: 330 LLGCSITGPESL-LVYEFVPNQSLLDNLFDKMLSP 363
              C+    +   +  E          L + +   
Sbjct: 83  YF-CTEKDRQFQYIAIELCA-----ATLQEYVEQK 111

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 42.4 bits (100), Expect = 2e-04
 Identities = 18/92 (19%), Positives = 36/92 (39%), Gaps = 14/92 (15%)

Query: 255 SKLNFSYETLEKATNYFHESNKLGQGGSGSVYKGT-LPGGEAVAVKRL------------ 301
           +   +  +   K    + +  KLG G  G V       G    A+K +            
Sbjct: 22  NPGMYVRKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSD 81

Query: 302 -FYNTTQWVDHFFNEVNLISGINHKNLVKLLG 332
              N  ++ +  +NE++L+  ++H N++KL  
Sbjct: 82  DNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 42.0 bits (99), Expect = 2e-04
 Identities = 17/96 (17%), Positives = 35/96 (36%), Gaps = 10/96 (10%)

Query: 268 TNYFHESNKLGQGGSGSVYKGT-LPGGEAVAVK-----RLFYNTTQWVDH---FFNEVNL 318
            + +  S  LG G  G V         + VA++     +    + +  D       E+ +
Sbjct: 134 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEI 193

Query: 319 ISGINHKNLVKLLGCSITGPESLLVYEFVPNQSLLD 354
           +  +NH  ++K+        +  +V E +    L D
Sbjct: 194 LKKLNHPCIIKIKN-FFDAEDYYIVLELMEGGELFD 228

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 41.5 bits (98), Expect = 2e-04
 Identities = 25/101 (24%), Positives = 42/101 (41%), Gaps = 17/101 (16%)

Query: 260 SYETLEKATNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFN---- 314
           + E   K  + F      GQG  G+V  G     G +VA+K++  +       F N    
Sbjct: 14  ADERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR-----FRNRELQ 68

Query: 315 EVNLISGINHKNLVKLLGCSITGPES-------LLVYEFVP 348
            +  ++ ++H N+V+L     T  E         +V E+VP
Sbjct: 69  IMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVP 109

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 41.4 bits (98), Expect = 3e-04
 Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 18/104 (17%)

Query: 271 FHESNKLGQGGSGSVYKGTLPG-GEAVAVKRL-------FYNTTQWVDHFFNEVNLISGI 322
           + + +KLG+G   +VYKG        VA+K +          T         EV+L+  +
Sbjct: 4   YIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTA------IREVSLLKDL 57

Query: 323 NHKNLVKLLGCSITGPESL-LVYEFVPN--QSLLDNLFDKMLSP 363
            H N+V L    I   +SL LV+E++    +  LD+  + +   
Sbjct: 58  KHANIVTLHDI-IHTEKSLTLVFEYLDKDLKQYLDDCGNIINMH 100

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 41.1 bits (97), Expect = 3e-04
 Identities = 16/61 (26%), Positives = 24/61 (39%), Gaps = 3/61 (4%)

Query: 276 KLGQGGSGSVYKGT-LPGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLG 332
            +G G  G   K      G+ +  K L Y   T        +EVNL+  + H N+V+   
Sbjct: 13  TIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYD 72

Query: 333 C 333
            
Sbjct: 73  R 73

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 41.5 bits (98), Expect = 3e-04
 Identities = 22/95 (23%), Positives = 40/95 (42%), Gaps = 14/95 (14%)

Query: 262 ETLEKATNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFN--EVNLI 319
           +T E+    +     +G G  G V++  L   + VA+K++        D  F   E+ ++
Sbjct: 33  KTGEQREIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVL------QDKRFKNRELQIM 86

Query: 320 SGINHKNLVKLLGCSITGPESL------LVYEFVP 348
             + H N+V L     +  +        LV E+VP
Sbjct: 87  RIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVP 121

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 41.0 bits (97), Expect = 3e-04
 Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 19/94 (20%)

Query: 275 NKLGQGGSGSVYKGT-LPGGEAVAVKRL--------FYNTTQWVDHFFNEVNLISGINHK 325
            K+G+G  G+V+K       E VA+KR+          ++         E+ L+  + HK
Sbjct: 8   EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSA------LREICLLKELKHK 61

Query: 326 NLVKLLGCSITGPESL-LVYEFVPN--QSLLDNL 356
           N+V+L    +   + L LV+EF     +   D+ 
Sbjct: 62  NIVRLHDV-LHSDKKLTLVFEFCDQDLKKYFDSC 94

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 41.1 bits (97), Expect = 4e-04
 Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 7/83 (8%)

Query: 277 LGQGGSGSVYKGT-LPGGEAVAVKRLFYNTTQ----WVDHFFNEVNLISGINHKNLVKLL 331
           +G+G    V     +  G  VA+K +  + TQ     +   F EV ++  +NH N+VKL 
Sbjct: 23  IGKGNFAKVKLARHILTGREVAIKII--DKTQLNPTSLQKLFREVRIMKILNHPNIVKLF 80

Query: 332 GCSITGPESLLVYEFVPNQSLLD 354
               T     L+ E+     + D
Sbjct: 81  EVIETEKTLYLIMEYASGGEVFD 103

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 40.9 bits (96), Expect = 4e-04
 Identities = 23/98 (23%), Positives = 42/98 (42%), Gaps = 5/98 (5%)

Query: 265 EKATNYFHESNKLGQGGSGSVYKGT-LPGGEAVAVKRLFYNTTQWVDH--FFNEVNLISG 321
               +Y+    +LG G  G V++      G     K  F NT   +D     NE+++++ 
Sbjct: 47  GSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAK--FINTPYPLDKYTVKNEISIMNQ 104

Query: 322 INHKNLVKLLGCSITGPESLLVYEFVPNQSLLDNLFDK 359
           ++H  L+ L        E +L+ EF+    L D +  +
Sbjct: 105 LHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAE 142

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 40.7 bits (96), Expect = 4e-04
 Identities = 16/60 (26%), Positives = 25/60 (41%), Gaps = 3/60 (5%)

Query: 276 KLGQGGSGSVYKGT-LPGGEAVAVKRL--FYNTTQWVDHFFNEVNLISGINHKNLVKLLG 332
            LG+G  G V K       +  AVK +       +       EV L+  ++H N++KL  
Sbjct: 29  MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 40.4 bits (95), Expect = 5e-04
 Identities = 17/88 (19%), Positives = 32/88 (36%), Gaps = 10/88 (11%)

Query: 276 KLGQGGSGSVYKGT-LPGGEAVAVK-----RLFYNTTQWVDH---FFNEVNLISGINHKN 326
            LG G  G V         + VA+K     +    + +  D       E+ ++  +NH  
Sbjct: 17  TLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPC 76

Query: 327 LVKLLGCSITGPESLLVYEFVPNQSLLD 354
           ++K+        +  +V E +    L D
Sbjct: 77  IIKIKN-FFDAEDYYIVLELMEGGELFD 103

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 40.4 bits (95), Expect = 5e-04
 Identities = 20/116 (17%), Positives = 39/116 (33%), Gaps = 7/116 (6%)

Query: 239 RRERKQLGALQVAVNKSKLNFSYETLEKATNY---FHESNKLGQGGSGSVYKGT-LPGGE 294
            + + +  + +   +++  +  Y+     + +   F   ++LG G  G V+K      G 
Sbjct: 24  HQLQPRRVSFRGEASETLQSPGYDPSRPESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGR 83

Query: 295 AVAVK--RLFYNTTQWVDHFFNEVNLISGI-NHKNLVKLLGCSITGPESLLVYEFV 347
             AVK     +   +       EV     +  H   V+L      G    L  E  
Sbjct: 84  LYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELC 139

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 40.3 bits (95), Expect = 6e-04
 Identities = 13/58 (22%), Positives = 26/58 (44%), Gaps = 1/58 (1%)

Query: 276 KLGQGGSGSVYKGT-LPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLG 332
            +G+G  G V            A K++     + VD F  E+ ++  ++H N+++L  
Sbjct: 16  TIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYE 73

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 39.9 bits (94), Expect = 8e-04
 Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 18/93 (19%)

Query: 275 NKLGQGGSGSVYKGT-LPGGEAVAVKRL-------FYNTTQWVDHFFNEVNLISGINHKN 326
            KLG G   +VYKG     G  VA+K +         +T         E++L+  + H+N
Sbjct: 11  EKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTA------IREISLMKELKHEN 64

Query: 327 LVKLLGCSITGPESL-LVYEFVPN--QSLLDNL 356
           +V+L    I     L LV+EF+ N  +  +D+ 
Sbjct: 65  IVRLYDV-IHTENKLTLVFEFMDNDLKKYMDSR 96

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 39.9 bits (94), Expect = 9e-04
 Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 19/93 (20%)

Query: 275 NKLGQGGSGSVYKGT-LPGGEAVAVKRL--------FYNTTQWVDHFFNEVNLISGINHK 325
            KLG+G  G VYK       E VA+KR+           T         EV+L+  + H+
Sbjct: 40  TKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTA------IREVSLLKELQHR 93

Query: 326 NLVKLLGCSITGPESL-LVYEFVPN--QSLLDN 355
           N+++L    I     L L++E+  N  +  +D 
Sbjct: 94  NIIELKSV-IHHNHRLHLIFEYAENDLKKYMDK 125

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	363
3a2e_A	108	Ginkbilobin-2; domain 26 unknown function (DUF26),	99.84
2e79_A	108	Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect	99.83
3a2e_A	108	Ginkbilobin-2; domain 26 unknown function (DUF26),	99.83
2e79_A	108	Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect	99.81
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.76
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.76
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.73
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.72
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.71
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.7
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.69
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.67
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.67
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.65
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.64
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.64
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.63
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.63
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.61
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.58
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.54
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.54
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.52
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.5
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.49
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.48
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.48
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.48
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.47
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.47
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.45
3uqc_A	286	Probable conserved transmembrane protein; structur	99.43
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.43
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.43
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.43
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.42
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.42
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.42
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.41
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.41
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.41
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.41
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.41
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.41
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.4
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.4
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.4
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.4
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.4
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.39
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.39
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.39
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.39
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.39
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.39
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.39
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.39
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.38
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.38
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.38
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.38
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.38
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.37
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.37
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.37
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.37
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.36
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.36
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.36
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.36
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.36
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.36
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.36
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.35
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.35
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.35
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.35
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.35
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.35
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.35
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.35
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.35
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.35
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.35
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.35
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.35
3bhy_A	283	Death-associated protein kinase 3; death associate	99.34
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.34
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.34
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.34
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.34
3niz_A	311	Rhodanese family protein; structural genomics, str	99.34
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.33
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.33
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.33
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.33
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.33
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.33
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.33
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.33
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.33
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.33
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.32
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.32
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.32
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.32
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.32
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.32
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.32
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.32
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.32
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.32
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.32
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.31
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.31
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.31
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.31
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.31
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.31
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.31
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.31
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.31
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.31
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.31
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.3
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.3
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.3
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.3
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.3
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.3
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.3
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.3
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.3
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.3
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.3
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.3
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.3
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.3
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.29
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.29
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.29
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.29
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.29
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.29
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.29
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.28
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.28
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.28
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.28
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.28
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.28
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.27
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.27
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.27
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.27
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.27
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.27
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.27
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.27
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.27
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.27
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.27
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.27
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.27
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.27
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.26
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.26
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.26
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.24
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.24
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.24
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.23
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.23
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.23
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.23
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.23
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.23
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.22
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.22
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.22
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.22
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.21
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.21
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.21
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.21
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.2
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.2
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.2
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.2
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.2
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.2
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.19
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.19
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.19
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.19
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.19
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.18
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.18
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.18
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.18
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.17
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.15
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.15
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.15
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.14
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.14
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.14
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.14
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.14
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.14
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.14
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.13
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.13
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.13
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.13
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.12
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.12
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.12
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.12
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.11
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.11
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.1
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.1
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.1
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.1
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.09
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.09
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.09
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.09
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.08
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.07
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.06
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.05
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.05
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.05
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.03
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.03
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.02
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.02
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.01
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.0
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.0
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	98.99
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	98.97
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	98.96
2dyl_A	318	Dual specificity mitogen-activated protein kinase	98.96
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	98.94
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	98.93
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	98.92
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	98.92
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	98.92
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	98.92
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	98.91
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	98.87
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	98.86
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	98.78
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	98.42
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	98.29
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	98.14
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	97.78
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	97.59
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	97.33
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	95.82
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	95.53
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	94.7
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	94.03
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	94.02
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	93.98
2ks1_B	44	Epidermal growth factor receptor; ERBB1, ERBB2, tr	93.89
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	92.82
2l2t_A	44	Receptor tyrosine-protein kinase ERBB-4; transmemb	92.32
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	92.24
2jwa_A	44	Receptor tyrosine-protein kinase ERBB-2; transmemb	91.75
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	89.92
3ats_A	357	Putative uncharacterized protein; hypothetical pro	89.26
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	87.04
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	84.32

>3a2e_A Ginkbilobin-2; domain 26 unknown function (DUF26), C-X8-C-X2-C motif, antifungal protein, embryo-abundant protein (EAP), plant protein; 2.38A {Ginkgo biloba}

Probab=99.84  E-value=2.7e-21  Score=147.61  Aligned_cols=76  Identities=21%  Similarity=0.478  Sum_probs=66.7

Q ss_pred             cccchhhhhc--cceeeecC-CCCCceEEEEeecCCCChhhhHHHHHHHHHHHHhhCCCCcCcceeEEEccceEEEEcCC
Q 017984            2 DIVTPLIARQ--RYAAVVNG-TGTASVYAFGECMKDLSPNDCNLCFAQCKTQVLKCLPFQLATRGGRVFYDGCYLRYDDY   78 (363)
Q Consensus         2 ~~l~~~~~~~--~~~~~~~g-~~~~~vy~~~~C~~d~~~~~C~~Cl~~a~~~~~~~~~~~~~~~~~~~~~~~C~~ry~~~   78 (363)
                      +.|+++++..  +|++...| .++++||||+|||||+++++|+.||+.|...++++||++   ++|++|++.|+|||+++
T Consensus        30 ~~L~~~a~~s~~~~~t~~~~~~~~~~vygl~qC~~Dls~~~C~~Cl~~a~~~~~~~C~~~---~g~~i~~~~C~lRY~~~  106 (108)
T 3a2e_A           30 ADLRQNTAFSGYDYKTSRAGSGGAPTAYGRATCKQSISQSDCTACLSNLVNRIFSICNNA---IGARVQLVDCFIQYEQR  106 (108)
T ss_dssp             HHHHHHGGGTTSEEEEEECCSTTCCCEEEEEEECTTSCHHHHHHHHHHHHTTHHHHTTSB---SSEEEEETTEEEEEESS
T ss_pred             HHHHhhCccccCCceEeeccCCCCceEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHCCCC---ceEEEECCCEEEEEeCC
Confidence            4566776655  56666655 456899999999999999999999999999999999997   99999999999999999


Q ss_pred             cc
Q 017984           79 DF   80 (363)
Q Consensus        79 ~f   80 (363)
                      +|
T Consensus       107 ~F  108 (108)
T 3a2e_A          107 SF  108 (108)
T ss_dssp             CC
T ss_pred             cC
Confidence            87

>3a2e_A Ginkbilobin-2; domain 26 unknown function (DUF26), C-X8-C-X2-C motif, antifungal protein, embryo-abundant protein (EAP), plant protein; 2.38A {Ginkgo biloba}

Probab=99.83  E-value=2.5e-20  Score=142.24  Aligned_cols=100  Identities=23%  Similarity=0.471  Sum_probs=84.3

Q ss_pred             ceeecccccCCCchhhcccHHHHHHHHHHHhccC-CCeeeeeeeccCCCceEEEEEEecCCCChhhHHHHHHHHHHhhhh
Q 017984           90 RTVCGSKDFGGNNTVFGANAIELVRNLSVQAVKN-DGFFVGSVTFSKGNVSVHGLAQCWEFVNGSACENCLENAVSRIAS  168 (363)
Q Consensus        90 ~~~~~~~~~~~~~~~f~~~~~~ll~~l~~~a~~~-~~~~~~~~~~~~~~~~vygl~qC~~dl~~~~C~~Cl~~~~~~~~~  168 (363)
                      ...|+..++. +++.|+.++..||..|+.+++.. .+|+++.... .+.++||||+||++|+++.+|..||+.++.++..
T Consensus         7 ~~~Cn~~~~t-~~s~f~~nl~~ll~~L~~~a~~s~~~~~t~~~~~-~~~~~vygl~qC~~Dls~~~C~~Cl~~a~~~~~~   84 (108)
T 3a2e_A            7 SSACNTQKIP-SGSPFNRNLRAMLADLRQNTAFSGYDYKTSRAGS-GGAPTAYGRATCKQSISQSDCTACLSNLVNRIFS   84 (108)
T ss_dssp             EEEECSSBCC-TTCTHHHHHHHHHHHHHHHGGGTTSEEEEEECCS-TTCCCEEEEEEECTTSCHHHHHHHHHHHHTTHHH
T ss_pred             eeecCCCccC-CCChHHHHHHHHHHHHHhhCccccCCceEeeccC-CCCceEEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence            4568776655 47889999999999999888754 4566655443 4668999999999999999999999999999987


Q ss_pred             -cCCCCCeEEeCCCccccccccee
Q 017984          169 -CTQKEEGRVLNAGCYLRYSTQRF  191 (363)
Q Consensus       169 -c~~~~~g~v~~~~C~~ry~~~~f  191 (363)
                       |.++.+|+|+..+|++||++++|
T Consensus        85 ~C~~~~g~~i~~~~C~lRY~~~~F  108 (108)
T 3a2e_A           85 ICNNAIGARVQLVDCFIQYEQRSF  108 (108)
T ss_dssp             HTTSBSSEEEEETTEEEEEESSCC
T ss_pred             HCCCCceEEEECCCEEEEEeCCcC
Confidence             66688999999999999999887

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.76  E-value=8.6e-19  Score=159.10  Aligned_cols=92  Identities=24%  Similarity=0.386  Sum_probs=80.6

Q ss_pred             ccCCCcCceecccCceEEEEEEcC------CCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLP------GGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESL  341 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  341 (363)
                      .++|...+.||+|+||.||+|.+.      +++.||||+++..+....++|.+|+++|++++|||||+++|++.+++.++
T Consensus        12 r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~   91 (299)
T 4asz_A           12 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI   91 (299)
T ss_dssp             GGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEE
T ss_pred             HHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEE
Confidence            356778889999999999999863      46789999998777777788999999999999999999999999999999


Q ss_pred             EEEEccCCCChhHHhhcC
Q 017984          342 LVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       342 lv~Ey~~~gsL~~~l~~~  359 (363)
                      ||||||++|||.++|+.+
T Consensus        92 lV~Ey~~~G~L~~~l~~~  109 (299)
T 4asz_A           92 MVFEYMKHGDLNKFLRAH  109 (299)
T ss_dssp             EEEECCTTCBHHHHHHHT
T ss_pred             EEEEcCCCCcHHHHHHhc
Confidence            999999999999999754

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.76  E-value=1.2e-18  Score=160.28  Aligned_cols=92  Identities=24%  Similarity=0.332  Sum_probs=82.5

Q ss_pred             cCCCcCceecccCceEEEEEEcC------CCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTLP------GGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLL  342 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  342 (363)
                      ++|...++||+|+||.||+|.++      +++.||||+++..+....++|.+|+++|++++|||||+++|++.+++.++|
T Consensus        41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l  120 (329)
T 4aoj_A           41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM  120 (329)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence            45667789999999999999863      478899999987777777889999999999999999999999999999999


Q ss_pred             EEEccCCCChhHHhhcCC
Q 017984          343 VYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       343 v~Ey~~~gsL~~~l~~~~  360 (363)
                      |||||++|+|.++|+++.
T Consensus       121 V~Ey~~~G~L~~~l~~~~  138 (329)
T 4aoj_A          121 VFEYMRHGDLNRFLRSHG  138 (329)
T ss_dssp             EEECCTTCBHHHHHHTSS
T ss_pred             EEEcCCCCcHHHHHHhcC
Confidence            999999999999998653

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.73  E-value=4.8e-18  Score=154.85  Aligned_cols=90  Identities=27%  Similarity=0.363  Sum_probs=77.4

Q ss_pred             CCCcCceecccCceEEEEEEcC------CCCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEE
Q 017984          270 YFHESNKLGQGGSGSVYKGTLP------GGEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLL  342 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  342 (363)
                      .++..+.||+|+||.||+|.+.      +++.||||+++.. .....++|.+|+.+|.+++|||||+++|++.+++.++|
T Consensus        27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l  106 (308)
T 4gt4_A           27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM  106 (308)
T ss_dssp             GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred             HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEE
Confidence            3556778999999999999862      4678999999754 33446789999999999999999999999999999999


Q ss_pred             EEEccCCCChhHHhhcC
Q 017984          343 VYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       343 v~Ey~~~gsL~~~l~~~  359 (363)
                      |||||++|||.++|..+
T Consensus       107 V~Ey~~~G~L~~~L~~~  123 (308)
T 4gt4_A          107 IFSYCSHGDLHEFLVMR  123 (308)
T ss_dssp             EEECCSSCBHHHHHHTT
T ss_pred             EEEcCCCCcHHHHHHhh
Confidence            99999999999999754

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.72  E-value=1.2e-17  Score=154.09  Aligned_cols=92  Identities=14%  Similarity=0.246  Sum_probs=76.8

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVY  344 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  344 (363)
                      .++|...+.||+|+||.||++.. .+|+.||||++...  .....+.|.+|+.+|++++|||||++++++.+++.+||||
T Consensus        23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVm  102 (350)
T 4b9d_A           23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVM  102 (350)
T ss_dssp             CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence            36788999999999999999996 56999999999754  4455678999999999999999999999999999999999


Q ss_pred             EccCCCChhHHhhcC
Q 017984          345 EFVPNQSLLDNLFDK  359 (363)
Q Consensus       345 Ey~~~gsL~~~l~~~  359 (363)
                      |||+||+|.++|..+
T Consensus       103 Ey~~gg~L~~~i~~~  117 (350)
T 4b9d_A          103 DYCEGGDLFKRINAQ  117 (350)
T ss_dssp             ECCTTCBHHHHHHHT
T ss_pred             eCCCCCcHHHHHHHc
Confidence            999999999999754

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.71  E-value=9e-18  Score=154.73  Aligned_cols=94  Identities=29%  Similarity=0.479  Sum_probs=83.1

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEc
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      .+.|...+.||+|+||.||++.. .+|+.||||++........+.+.+|+.+|++++|||||++++++.+++.+||||||
T Consensus        73 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy  152 (346)
T 4fih_A           73 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF  152 (346)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             hHhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeC
Confidence            35688889999999999999996 56999999999755444456689999999999999999999999999999999999


Q ss_pred             cCCCChhHHhhcCCC
Q 017984          347 VPNQSLLDNLFDKML  361 (363)
Q Consensus       347 ~~~gsL~~~l~~~~~  361 (363)
                      |++|+|.++|.+.++
T Consensus       153 ~~gg~L~~~l~~~~l  167 (346)
T 4fih_A          153 LEGGALTDIVTHTRM  167 (346)
T ss_dssp             CTTEEHHHHHHHSCC
T ss_pred             CCCCcHHHHHHcCCC
Confidence            999999999987654

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.70  E-value=2.4e-17  Score=155.63  Aligned_cols=94  Identities=29%  Similarity=0.479  Sum_probs=84.2

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEc
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      .+.|...+.||+|+||.||++.. .+|+.||||++........+.+.+|+.+|++++|||||++++++.+++.+||||||
T Consensus       150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy  229 (423)
T 4fie_A          150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF  229 (423)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeC
Confidence            45688899999999999999996 56999999999865555556799999999999999999999999999999999999


Q ss_pred             cCCCChhHHhhcCCC
Q 017984          347 VPNQSLLDNLFDKML  361 (363)
Q Consensus       347 ~~~gsL~~~l~~~~~  361 (363)
                      |+||+|.++|...++
T Consensus       230 ~~gG~L~~~i~~~~l  244 (423)
T 4fie_A          230 LEGGALTDIVTHTRM  244 (423)
T ss_dssp             CTTEEHHHHHHHSCC
T ss_pred             CCCCcHHHHHhccCC
Confidence            999999999976654

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.69  E-value=2.4e-17  Score=149.71  Aligned_cols=92  Identities=20%  Similarity=0.154  Sum_probs=81.5

Q ss_pred             cCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVY  344 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  344 (363)
                      ++|...+.||+|+||.||++.. .+|+.||||++...   .....+.+.+|+++|++++|||||++++++.+++.+||||
T Consensus        32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm  111 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL  111 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            4688999999999999999996 56999999999743   2234567999999999999999999999999999999999


Q ss_pred             EccCCCChhHHhhcCC
Q 017984          345 EFVPNQSLLDNLFDKM  360 (363)
Q Consensus       345 Ey~~~gsL~~~l~~~~  360 (363)
                      ||++||+|.++|.+..
T Consensus       112 Ey~~gG~L~~~i~~~~  127 (311)
T 4aw0_A          112 SYAKNGELLKYIRKIG  127 (311)
T ss_dssp             CCCTTEEHHHHHHHHS
T ss_pred             ecCCCCCHHHHHHHcC
Confidence            9999999999997643

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.67  E-value=1.2e-16  Score=145.27  Aligned_cols=91  Identities=29%  Similarity=0.400  Sum_probs=77.9

Q ss_pred             hccCCCcCceecccCceEEEEEEcCCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEE
Q 017984          267 ATNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVY  344 (363)
Q Consensus       267 ~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  344 (363)
                      ..+++...+.||+|+||.||+|.+.+  .||||+++..  +....++|.+|+.+|++++|||||+++|++.+ +.++|||
T Consensus        34 ~~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVm  110 (307)
T 3omv_A           34 EASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVT  110 (307)
T ss_dssp             CTTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEE
T ss_pred             cHHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEE
Confidence            44667788999999999999999753  5999999743  45567789999999999999999999998764 5689999


Q ss_pred             EccCCCChhHHhhcCC
Q 017984          345 EFVPNQSLLDNLFDKM  360 (363)
Q Consensus       345 Ey~~~gsL~~~l~~~~  360 (363)
                      |||++|+|.++|+...
T Consensus       111 Ey~~gGsL~~~l~~~~  126 (307)
T 3omv_A          111 QWCEGSSLYKHLHVQE  126 (307)
T ss_dssp             ECCSSCBHHHHHHTSC
T ss_pred             EcCCCCCHHHHHhhcC
Confidence            9999999999997643

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.67  E-value=1.3e-16  Score=143.79  Aligned_cols=89  Identities=24%  Similarity=0.250  Sum_probs=76.2

Q ss_pred             CcCceecccCceEEEEEEc-CCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEe----CCeeEEEE
Q 017984          272 HESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSIT----GPESLLVY  344 (363)
Q Consensus       272 ~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lv~  344 (363)
                      ...+.||+|+||.||+|.. .+++.||+|++...  .....+.|.+|+.+|++++|||||++++++..    ++.+||||
T Consensus        29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm  108 (290)
T 3fpq_A           29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT  108 (290)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence            4566899999999999996 46889999999643  44556789999999999999999999999875    34689999


Q ss_pred             EccCCCChhHHhhcCC
Q 017984          345 EFVPNQSLLDNLFDKM  360 (363)
Q Consensus       345 Ey~~~gsL~~~l~~~~  360 (363)
                      |||++|+|.++|.+..
T Consensus       109 Ey~~gg~L~~~l~~~~  124 (290)
T 3fpq_A          109 ELMTSGTLKTYLKRFK  124 (290)
T ss_dssp             ECCCSCBHHHHHHHHS
T ss_pred             eCCCCCCHHHHHHhcC
Confidence            9999999999997643

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.65  E-value=2.6e-16  Score=142.82  Aligned_cols=92  Identities=17%  Similarity=0.274  Sum_probs=77.1

Q ss_pred             cCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCC--------
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGP--------  338 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--------  338 (363)
                      ++|...+.||+|+||.||++.. .+|+.||||+++.. .....+.+.+|+.+|++++|||||++++++.+.+        
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~   84 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS   84 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred             hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence            3578889999999999999996 56899999999754 3444577999999999999999999999987644        


Q ss_pred             ----eeEEEEEccCCCChhHHhhcCC
Q 017984          339 ----ESLLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       339 ----~~~lv~Ey~~~gsL~~~l~~~~  360 (363)
                          .+||||||+++|+|.++|..+.
T Consensus        85 ~~~~~l~ivmE~~~gg~L~~~l~~~~  110 (299)
T 4g31_A           85 SPKVYLYIQMQLCRKENLKDWMNGRC  110 (299)
T ss_dssp             --CEEEEEEEECCCSCCHHHHHHTCC
T ss_pred             CCCcEEEEEEecCCCCcHHHHHHhcC
Confidence                3799999999999999997654

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.64  E-value=2.1e-16  Score=143.96  Aligned_cols=90  Identities=22%  Similarity=0.286  Sum_probs=72.7

Q ss_pred             CCCcCceecccCceEEEEEEcCCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCC----eeEEEEE
Q 017984          270 YFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGP----ESLLVYE  345 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~~lv~E  345 (363)
                      ++.+.+.||+|+||.||+|.+. |+.||||++...... ...+..|+..+.+++|||||++++++.+++    .++||||
T Consensus         4 ~i~L~~~iG~G~fG~Vy~~~~~-g~~VAvK~l~~~~~~-~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~E   81 (303)
T 3hmm_A            4 TIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD   81 (303)
T ss_dssp             GEEEEEEEEECSSSEEEEEEET-TEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred             EEEEEEEEeeCCCeEEEEEEEC-CEEEEEEEECccchh-hHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEec
Confidence            4667889999999999999984 899999999653221 222345666667889999999999998754    6899999


Q ss_pred             ccCCCChhHHhhcCCC
Q 017984          346 FVPNQSLLDNLFDKML  361 (363)
Q Consensus       346 y~~~gsL~~~l~~~~~  361 (363)
                      ||++|+|.++|++++.
T Consensus        82 y~~~gsL~~~l~~~~l   97 (303)
T 3hmm_A           82 YHEHGSLFDYLNRYTV   97 (303)
T ss_dssp             CCTTCBHHHHHHHCCB
T ss_pred             CCCCCcHHHHHHhCCC
Confidence            9999999999987654

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.64  E-value=3.9e-16  Score=139.58  Aligned_cols=91  Identities=20%  Similarity=0.334  Sum_probs=75.8

Q ss_pred             cCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVY  344 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  344 (363)
                      ++|...+.||+|+||.||++.. .+|+.||||++...   .....+.+.+|+.+|++++|||||++++++.+++.+||||
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm   92 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI   92 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence            6799999999999999999996 56999999999753   2334567999999999999999999999999999999999


Q ss_pred             EccCCCChhHHhhcCC
Q 017984          345 EFVPNQSLLDNLFDKM  360 (363)
Q Consensus       345 Ey~~~gsL~~~l~~~~  360 (363)
                      ||+ +|+|.++|.++.
T Consensus        93 Ey~-~g~L~~~l~~~~  107 (275)
T 3hyh_A           93 EYA-GNELFDYIVQRD  107 (275)
T ss_dssp             ECC-CEEHHHHHHHSC
T ss_pred             eCC-CCCHHHHHHHcC
Confidence            999 679999987654

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.63  E-value=2.8e-16  Score=145.72  Aligned_cols=103  Identities=25%  Similarity=0.294  Sum_probs=86.2

Q ss_pred             cccchHHHHHhccCCCcCceecccCceEEEEEEcC------CCCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCC-CCcc
Q 017984          257 LNFSYETLEKATNYFHESNKLGQGGSGSVYKGTLP------GGEAVAVKRLFYN-TTQWVDHFFNEVNLISGINH-KNLV  328 (363)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h-~niv  328 (363)
                      ..++...++.+.++|...+.||+|+||.||+|.+.      .++.||||++... .....++|.+|+.+|.+++| ||||
T Consensus        52 lp~~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV  131 (353)
T 4ase_A           52 LPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV  131 (353)
T ss_dssp             SCCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred             CCCCCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEE
Confidence            34556677788899999999999999999999853      2358999999764 34446779999999999965 9999


Q ss_pred             ceeeEEEeC-CeeEEEEEccCCCChhHHhhcC
Q 017984          329 KLLGCSITG-PESLLVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       329 ~l~~~~~~~-~~~~lv~Ey~~~gsL~~~l~~~  359 (363)
                      +++|+|.+. +.++||||||++|+|.++|++.
T Consensus       132 ~l~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~  163 (353)
T 4ase_A          132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK  163 (353)
T ss_dssp             CEEEEECCTTSCCEEEEECCTTEEHHHHHHHT
T ss_pred             EEEEEEEecCCEEEEEEEcCCCCCHHHHHHhc
Confidence            999998764 5789999999999999999754

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.63  E-value=3.1e-16  Score=143.98  Aligned_cols=88  Identities=20%  Similarity=0.265  Sum_probs=77.1

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEc
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      .+.|...++||+|+||.||++.. .+|+.||||+++....     +.+|+.+|++++|||||++++++.+++.+||||||
T Consensus        57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy  131 (336)
T 4g3f_A           57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL  131 (336)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence            34577788999999999999996 5699999999975422     25799999999999999999999999999999999


Q ss_pred             cCCCChhHHhhcCC
Q 017984          347 VPNQSLLDNLFDKM  360 (363)
Q Consensus       347 ~~~gsL~~~l~~~~  360 (363)
                      |+||+|.++|.+..
T Consensus       132 ~~gg~L~~~l~~~~  145 (336)
T 4g3f_A          132 LEGGSLGQLIKQMG  145 (336)
T ss_dssp             CTTCBHHHHHHHHS
T ss_pred             cCCCcHHHHHHHcC
Confidence            99999999997643

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.61  E-value=9.9e-17  Score=145.48  Aligned_cols=92  Identities=23%  Similarity=0.219  Sum_probs=74.0

Q ss_pred             cCCCcCceecccCceEEEEEEc----CCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL----PGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLL  342 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~----~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  342 (363)
                      ++|...+.||+|+||.||++..    .+++.||||+++..  .......+.+|+.+|.+++|||||++++++.+++.+||
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i  103 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL  103 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence            4688999999999999999984    24789999999753  12223468899999999999999999999999999999


Q ss_pred             EEEccCCCChhHHhhcCC
Q 017984          343 VYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       343 v~Ey~~~gsL~~~l~~~~  360 (363)
                      |||||+||+|.++|.++.
T Consensus       104 vmEy~~gg~L~~~l~~~~  121 (304)
T 3ubd_A          104 ILDFLRGGDLFTRLSKEV  121 (304)
T ss_dssp             EECCCTTCEEHHHHHHHC
T ss_pred             EEEcCCCCCHHHHHHhcC
Confidence            999999999999997654

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.58  E-value=5e-15  Score=146.20  Aligned_cols=92  Identities=23%  Similarity=0.337  Sum_probs=83.7

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEc
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      .++|...+.||+|+||.||++.. .+|+.||+|++........+.+.+|+.+|+.++|||||+|++++.+.+.++|||||
T Consensus       156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~  235 (573)
T 3uto_A          156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF  235 (573)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence            36788999999999999999996 56999999999876666677899999999999999999999999999999999999


Q ss_pred             cCCCChhHHhhcC
Q 017984          347 VPNQSLLDNLFDK  359 (363)
Q Consensus       347 ~~~gsL~~~l~~~  359 (363)
                      |+||+|.++|.++
T Consensus       236 ~~gg~L~~~i~~~  248 (573)
T 3uto_A          236 MSGGELFEKVADE  248 (573)
T ss_dssp             CCCCBHHHHHTCT
T ss_pred             cCCCcHHHHHHHh
Confidence            9999999999654

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.54  E-value=6.7e-15  Score=134.87  Aligned_cols=103  Identities=33%  Similarity=0.495  Sum_probs=91.7

Q ss_pred             ccchHHHHHhccCCCcCceecccCceEEEEEEcCCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeC
Q 017984          258 NFSYETLEKATNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITG  337 (363)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~  337 (363)
                      .+.+.++...+++|...+.||+|+||.||++.+.+++.||||++........+.|.+|+.++..++||||+++++++...
T Consensus        28 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~  107 (321)
T 2qkw_B           28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDER  107 (321)
T ss_dssp             --CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCT
T ss_pred             eecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCC
Confidence            34556667788999999999999999999999888999999999876666678899999999999999999999999999


Q ss_pred             CeeEEEEEccCCCChhHHhhcCC
Q 017984          338 PESLLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       338 ~~~~lv~Ey~~~gsL~~~l~~~~  360 (363)
                      +..++||||+++|+|.+++....
T Consensus       108 ~~~~lv~e~~~~~~L~~~l~~~~  130 (321)
T 2qkw_B          108 NEMILIYKYMENGNLKRHLYGSD  130 (321)
T ss_dssp             TCCEEEEECCTTCBTGGGSSSSC
T ss_pred             CeEEEEEEcCCCCcHHHHHhccC
Confidence            99999999999999999997654

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.54  E-value=1.4e-14  Score=136.45  Aligned_cols=91  Identities=14%  Similarity=0.249  Sum_probs=77.8

Q ss_pred             cCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEe------CCe
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSIT------GPE  339 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~~~  339 (363)
                      ++|...+.||+|+||.||++.. .+|+.||||+++..  .....+.+.+|+.+|+.++|||||++++++..      .+.
T Consensus        54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~  133 (398)
T 4b99_A           54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS  133 (398)
T ss_dssp             SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred             CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence            5688999999999999999996 56999999999753  33445678999999999999999999998764      367


Q ss_pred             eEEEEEccCCCChhHHhhcCC
Q 017984          340 SLLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       340 ~~lv~Ey~~~gsL~~~l~~~~  360 (363)
                      +|||||||+ |+|.++|.++.
T Consensus       134 ~~ivmE~~~-g~L~~~i~~~~  153 (398)
T 4b99_A          134 VYVVLDLME-SDLHQIIHSSQ  153 (398)
T ss_dssp             EEEEEECCS-EEHHHHHTSSS
T ss_pred             EEEEEeCCC-CCHHHHHHhcC
Confidence            899999996 68999997654

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.52  E-value=5.9e-14  Score=128.73  Aligned_cols=105  Identities=26%  Similarity=0.342  Sum_probs=89.7

Q ss_pred             cccchHHHHHhccC----------CCcCceecccCceEEEEEEcC-CCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCC
Q 017984          257 LNFSYETLEKATNY----------FHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHK  325 (363)
Q Consensus       257 ~~~~~~~~~~~~~~----------~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~  325 (363)
                      ..++++++..+++.          |...+.||+|+||.||++... +|+.||||++........+.+.+|+.++.+++||
T Consensus        23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~  102 (321)
T 2c30_A           23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF  102 (321)
T ss_dssp             --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred             CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence            34677777777654          556678999999999999975 6999999999876555667899999999999999


Q ss_pred             CccceeeEEEeCCeeEEEEEccCCCChhHHhhcCCC
Q 017984          326 NLVKLLGCSITGPESLLVYEFVPNQSLLDNLFDKML  361 (363)
Q Consensus       326 niv~l~~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~  361 (363)
                      ||+++++++...+..+|||||+++|+|.+++...+.
T Consensus       103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~l  138 (321)
T 2c30_A          103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRL  138 (321)
T ss_dssp             TBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTCCC
T ss_pred             CcceEEEEEEECCEEEEEEecCCCCCHHHHHHhcCC
Confidence            999999999999999999999999999999876543

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.50  E-value=2.9e-14  Score=130.85  Aligned_cols=106  Identities=41%  Similarity=0.557  Sum_probs=92.6

Q ss_pred             cccccchHHHHHhccCCCcCceecccCceEEEEEEcCCCCEEEEEEeccCCh-hhHHHHHHHHHHHhcCCCCCccceeeE
Q 017984          255 SKLNFSYETLEKATNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTT-QWVDHFFNEVNLISGINHKNLVKLLGC  333 (363)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~  333 (363)
                      ....+++.++....++|...+.||+|+||.||++...+|+.||||++..... .....|.+|+.++..++||||++++++
T Consensus        16 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~   95 (326)
T 3uim_A           16 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGF   95 (326)
T ss_dssp             CCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEE
T ss_pred             ccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEE
Confidence            3456889999999999999999999999999999988899999999975422 223368999999999999999999999


Q ss_pred             EEeCCeeEEEEEccCCCChhHHhhcCC
Q 017984          334 SITGPESLLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       334 ~~~~~~~~lv~Ey~~~gsL~~~l~~~~  360 (363)
                      +...+..++||||+++|+|.++|....
T Consensus        96 ~~~~~~~~lv~e~~~~~~L~~~l~~~~  122 (326)
T 3uim_A           96 CMTPTERLLVYPYMANGSVASCLRERP  122 (326)
T ss_dssp             ECCSSCCEEEEECCTTCBHHHHHHCCS
T ss_pred             EecCCceEEEEEeccCCCHHHHHHhcc
Confidence            999999999999999999999998653

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.49  E-value=5e-14  Score=131.23  Aligned_cols=93  Identities=22%  Similarity=0.324  Sum_probs=79.6

Q ss_pred             HHHHhccCCCcCceecccCceEEEEEEc----CCCCEEEEEEeccCChhhHHHHHHHHHHHhcC-CCCCccceeeEEEeC
Q 017984          263 TLEKATNYFHESNKLGQGGSGSVYKGTL----PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGI-NHKNLVKLLGCSITG  337 (363)
Q Consensus       263 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~----~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~  337 (363)
                      .+....+.|...+.||+|+||.||++..    ..++.||+|++.....  ..++.+|+++|..+ +|||||++++++.+.
T Consensus        15 ~~p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~--~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~   92 (361)
T 4f9c_A           15 AVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSH--PIRIAAELQCLTVAGGQDNVMGVKYCFRKN   92 (361)
T ss_dssp             HSGGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSC--HHHHHHHHHHHHHTCSBTTBCCCSEEEEET
T ss_pred             hcCCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccC--HHHHHHHHHHHHHhcCCCCCceEEEEEEEC
Confidence            3344567899999999999999999974    2467899999865432  35688999999998 699999999999999


Q ss_pred             CeeEEEEEccCCCChhHHhh
Q 017984          338 PESLLVYEFVPNQSLLDNLF  357 (363)
Q Consensus       338 ~~~~lv~Ey~~~gsL~~~l~  357 (363)
                      +.++|||||+++|+|.+++.
T Consensus        93 ~~~~lvmE~~~g~~L~~~~~  112 (361)
T 4f9c_A           93 DHVVIAMPYLEHESFLDILN  112 (361)
T ss_dssp             TEEEEEEECCCCCCHHHHHT
T ss_pred             CEEEEEEeCCCcccHHHHHc
Confidence            99999999999999999884

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.48  E-value=1.4e-13  Score=124.85  Aligned_cols=95  Identities=24%  Similarity=0.421  Sum_probs=84.0

Q ss_pred             hccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEE
Q 017984          267 ATNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYE  345 (363)
Q Consensus       267 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  345 (363)
                      ..++|...+.||+|+||.||++.. .+++.||||++........+.+.+|+.++..++||||+++++++...+..++|||
T Consensus        18 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   97 (297)
T 3fxz_A           18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME   97 (297)
T ss_dssp             GGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEE
Confidence            346788999999999999999995 5689999999976544456779999999999999999999999999999999999


Q ss_pred             ccCCCChhHHhhcCCC
Q 017984          346 FVPNQSLLDNLFDKML  361 (363)
Q Consensus       346 y~~~gsL~~~l~~~~~  361 (363)
                      |+++|+|.+++.+...
T Consensus        98 ~~~~~~L~~~~~~~~~  113 (297)
T 3fxz_A           98 YLAGGSLTDVVTETCM  113 (297)
T ss_dssp             CCTTCBHHHHHHHSCC
T ss_pred             CCCCCCHHHHHhhcCC
Confidence            9999999999876543

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.48  E-value=1.5e-13  Score=125.19  Aligned_cols=91  Identities=21%  Similarity=0.322  Sum_probs=83.3

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEc
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      .++|...+.||+|+||.||++.. .+++.||+|++...+....+.|.+|+.++.+++||||+++++++..++..++||||
T Consensus         9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~   88 (310)
T 3s95_A            9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY   88 (310)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence            35677889999999999999996 46899999999877777788899999999999999999999999999999999999


Q ss_pred             cCCCChhHHhhc
Q 017984          347 VPNQSLLDNLFD  358 (363)
Q Consensus       347 ~~~gsL~~~l~~  358 (363)
                      +++|+|.+++..
T Consensus        89 ~~~~~L~~~l~~  100 (310)
T 3s95_A           89 IKGGTLRGIIKS  100 (310)
T ss_dssp             CTTCBHHHHHHH
T ss_pred             cCCCcHHHHHHh
Confidence            999999999976

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.48  E-value=3.4e-14  Score=135.81  Aligned_cols=100  Identities=18%  Similarity=0.128  Sum_probs=85.8

Q ss_pred             cchHHHHHhccCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCccceeeEE
Q 017984          259 FSYETLEKATNYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYNT---TQWVDHFFNEVNLISGINHKNLVKLLGCS  334 (363)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~  334 (363)
                      +.+.++...+++|...++||+|+||.||++... +++.||+|++....   ......+.+|+.++..++||||+++++++
T Consensus        64 ~~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~  143 (437)
T 4aw2_A           64 SKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAF  143 (437)
T ss_dssp             HHHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred             chhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence            445666777889999999999999999999975 47899999996421   11223488999999999999999999999


Q ss_pred             EeCCeeEEEEEccCCCChhHHhhc
Q 017984          335 ITGPESLLVYEFVPNQSLLDNLFD  358 (363)
Q Consensus       335 ~~~~~~~lv~Ey~~~gsL~~~l~~  358 (363)
                      .+.+.++|||||+++|+|.++|.+
T Consensus       144 ~~~~~~~lV~Ey~~gg~L~~~l~~  167 (437)
T 4aw2_A          144 QDDNNLYLVMDYYVGGDLLTLLSK  167 (437)
T ss_dssp             ECSSEEEEEECCCTTCBHHHHHHT
T ss_pred             eeCCEEEEEEecCCCCcHHHHHHH
Confidence            999999999999999999999976

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.47  E-value=2.5e-13  Score=123.40  Aligned_cols=103  Identities=43%  Similarity=0.642  Sum_probs=91.3

Q ss_pred             cccccchHHHHHhccCCCcC------ceecccCceEEEEEEcCCCCEEEEEEeccC----ChhhHHHHHHHHHHHhcCCC
Q 017984          255 SKLNFSYETLEKATNYFHES------NKLGQGGSGSVYKGTLPGGEAVAVKRLFYN----TTQWVDHFFNEVNLISGINH  324 (363)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~------~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~----~~~~~~~~~~E~~~l~~l~h  324 (363)
                      ....|++.++..++++|...      +.||+|+||.||++.. +++.||||++...    .....+.|.+|+.++.+++|
T Consensus        11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h   89 (307)
T 2nru_A           11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH   89 (307)
T ss_dssp             CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred             CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence            44678999999999999887      8999999999999997 5889999999643    23446779999999999999


Q ss_pred             CCccceeeEEEeCCeeEEEEEccCCCChhHHhhc
Q 017984          325 KNLVKLLGCSITGPESLLVYEFVPNQSLLDNLFD  358 (363)
Q Consensus       325 ~niv~l~~~~~~~~~~~lv~Ey~~~gsL~~~l~~  358 (363)
                      |||+++++++...+..++||||+++|+|.+++..
T Consensus        90 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  123 (307)
T 2nru_A           90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSC  123 (307)
T ss_dssp             TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHT
T ss_pred             CCeEEEEEEEecCCceEEEEEecCCCcHHHHHHh
Confidence            9999999999999999999999999999999864

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.47  E-value=1.1e-13  Score=137.02  Aligned_cols=93  Identities=19%  Similarity=0.126  Sum_probs=76.6

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC------ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCee
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN------TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPES  340 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~------~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  340 (363)
                      .++|...++||+|+||.||++.. .+|+.||||++.+.      ..........++.++..++|||||++++++.+.+.+
T Consensus       188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l  267 (689)
T 3v5w_A          188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL  267 (689)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred             hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence            35688999999999999999996 56999999999642      111122234456778888999999999999999999


Q ss_pred             EEEEEccCCCChhHHhhcCC
Q 017984          341 LLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       341 ~lv~Ey~~~gsL~~~l~~~~  360 (363)
                      ||||||++||+|.++|.++.
T Consensus       268 ylVmEy~~GGdL~~~l~~~~  287 (689)
T 3v5w_A          268 SFILDLMNGGDLHYHLSQHG  287 (689)
T ss_dssp             EEEECCCCSCBHHHHHHHHC
T ss_pred             EEEEecCCCCcHHHHHHhcC
Confidence            99999999999999997643

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.45  E-value=2e-13  Score=125.67  Aligned_cols=93  Identities=23%  Similarity=0.334  Sum_probs=82.8

Q ss_pred             hccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEE
Q 017984          267 ATNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLV  343 (363)
Q Consensus       267 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  343 (363)
                      ..++|...+.||+|+||.||++.. .+|+.||||++...  .....+.+.+|+.+++.++||||+++++++...+..++|
T Consensus        13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv   92 (328)
T 3fe3_A           13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLI   92 (328)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEE
Confidence            356788999999999999999996 67999999999653  445567799999999999999999999999999999999


Q ss_pred             EEccCCCChhHHhhcC
Q 017984          344 YEFVPNQSLLDNLFDK  359 (363)
Q Consensus       344 ~Ey~~~gsL~~~l~~~  359 (363)
                      |||+++|+|.++|..+
T Consensus        93 ~e~~~~~~L~~~l~~~  108 (328)
T 3fe3_A           93 MEYASGGEVFDYLVAH  108 (328)
T ss_dssp             ECCCTTCBHHHHHHHH
T ss_pred             EECCCCCcHHHHHHHc
Confidence            9999999999998654

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.43  E-value=3e-13  Score=121.96  Aligned_cols=91  Identities=13%  Similarity=0.063  Sum_probs=81.0

Q ss_pred             cCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVY  344 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  344 (363)
                      ++|...+.||+|+||.||++... +++.||||++...   .....+.|.+|+.++.+++||||+++++++...+..+|||
T Consensus        31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  110 (286)
T 3uqc_A           31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA  110 (286)
T ss_dssp             TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence            56888999999999999999974 5899999999754   2344578999999999999999999999999999999999


Q ss_pred             EccCCCChhHHhhcC
Q 017984          345 EFVPNQSLLDNLFDK  359 (363)
Q Consensus       345 Ey~~~gsL~~~l~~~  359 (363)
                      ||+++++|.++|.+.
T Consensus       111 e~~~g~~L~~~l~~~  125 (286)
T 3uqc_A          111 EWIRGGSLQEVADTS  125 (286)
T ss_dssp             ECCCEEEHHHHHTTC
T ss_pred             EecCCCCHHHHHhcC
Confidence            999999999998654

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.43  E-value=2.1e-13  Score=127.73  Aligned_cols=93  Identities=25%  Similarity=0.354  Sum_probs=80.9

Q ss_pred             ccCCCcCceecccCceEEEEEEcC----CCCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLP----GGEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLL  342 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~----~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  342 (363)
                      .++|...+.||+|+||.||+|.+.    ++..||||+++.. .....+.|.+|+.++.+++||||+++++++...+..+|
T Consensus        44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l  123 (373)
T 2qol_A           44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI  123 (373)
T ss_dssp             GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred             HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence            356888999999999999999863    4678999999764 44556789999999999999999999999999999999


Q ss_pred             EEEccCCCChhHHhhcCC
Q 017984          343 VYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       343 v~Ey~~~gsL~~~l~~~~  360 (363)
                      ||||+++|+|.++|.++.
T Consensus       124 v~e~~~~~sL~~~l~~~~  141 (373)
T 2qol_A          124 VTEYMENGSLDSFLRKHD  141 (373)
T ss_dssp             EEECCTTCBHHHHHHTTT
T ss_pred             EEeCCCCCcHHHHHHhCC
Confidence            999999999999997653

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.43  E-value=4.8e-13  Score=124.75  Aligned_cols=94  Identities=21%  Similarity=0.285  Sum_probs=81.9

Q ss_pred             hccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCCh------hhHHHHHHHHHHHhcCCCCCccceeeEEEeCCe
Q 017984          267 ATNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTT------QWVDHFFNEVNLISGINHKNLVKLLGCSITGPE  339 (363)
Q Consensus       267 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  339 (363)
                      ..+.|...+.||+|+||.||++.. .+|+.||+|++.....      ...+.+.+|+.++.+++||||+++++++...+.
T Consensus        10 ~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~   89 (361)
T 2yab_A           10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTD   89 (361)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred             hhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCE
Confidence            346688899999999999999996 4689999999975422      135679999999999999999999999999999


Q ss_pred             eEEEEEccCCCChhHHhhcCC
Q 017984          340 SLLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       340 ~~lv~Ey~~~gsL~~~l~~~~  360 (363)
                      .+|||||+++|+|.++|..+.
T Consensus        90 ~~lv~e~~~gg~L~~~l~~~~  110 (361)
T 2yab_A           90 VVLILELVSGGELFDFLAQKE  110 (361)
T ss_dssp             EEEEEECCCSCBHHHHHTTCS
T ss_pred             EEEEEEcCCCCcHHHHHHhcC
Confidence            999999999999999997643

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.43  E-value=3.3e-13  Score=123.65  Aligned_cols=92  Identities=17%  Similarity=0.303  Sum_probs=78.1

Q ss_pred             cCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCC--------
Q 017984          269 NYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGP--------  338 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--------  338 (363)
                      ++|...+.||+|+||.||++... +|+.||||+++.. .....+.+.+|+.++.+++||||+++++++.+..        
T Consensus         6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~   85 (332)
T 3qd2_B            6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEM   85 (332)
T ss_dssp             HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHH
T ss_pred             hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhh
Confidence            45788899999999999999974 7899999999754 3345677999999999999999999999986643        


Q ss_pred             -------------------------------------------------eeEEEEEccCCCChhHHhhcCC
Q 017984          339 -------------------------------------------------ESLLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       339 -------------------------------------------------~~~lv~Ey~~~gsL~~~l~~~~  360 (363)
                                                                       ..++||||+++|+|.+++....
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~  156 (332)
T 3qd2_B           86 DEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRC  156 (332)
T ss_dssp             HC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCC
T ss_pred             hhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhccc
Confidence                                                             3899999999999999997643

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.42  E-value=2.1e-13  Score=124.40  Aligned_cols=98  Identities=26%  Similarity=0.414  Sum_probs=83.8

Q ss_pred             HHHHHhccCCCcCceecccCceEEEEEEcCCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCe
Q 017984          262 ETLEKATNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPE  339 (363)
Q Consensus       262 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  339 (363)
                      .++....++|...+.||+|+||.||++.. +|+.||||++...  .....++|.+|+.++.+++||||+++++++...+.
T Consensus        30 ~~~~i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~  108 (309)
T 3p86_A           30 DDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPN  108 (309)
T ss_dssp             --CBCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTC
T ss_pred             ccccCChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCc
Confidence            33444567788999999999999999987 4889999999754  34456789999999999999999999999999999


Q ss_pred             eEEEEEccCCCChhHHhhcCC
Q 017984          340 SLLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       340 ~~lv~Ey~~~gsL~~~l~~~~  360 (363)
                      .++||||+++|+|.++|....
T Consensus       109 ~~lv~e~~~~~~L~~~l~~~~  129 (309)
T 3p86_A          109 LSIVTEYLSRGSLYRLLHKSG  129 (309)
T ss_dssp             CEEEEECCTTCBHHHHHHSTT
T ss_pred             eEEEEecCCCCcHHHHHhhcC
Confidence            999999999999999997643

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.42  E-value=4.1e-13  Score=119.63  Aligned_cols=92  Identities=24%  Similarity=0.352  Sum_probs=81.3

Q ss_pred             ccCCCcCceecccCceEEEEEEcCCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEcc
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFV  347 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~  347 (363)
                      .++|...+.||+|+||.||++...+++.||+|++..... ..+.+.+|+.++.+++||||+++++++.+++..++||||+
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   87 (269)
T 4hcu_A            9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM   87 (269)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred             hhhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeC
Confidence            356778899999999999999987888999999975432 3467999999999999999999999999999999999999


Q ss_pred             CCCChhHHhhcCC
Q 017984          348 PNQSLLDNLFDKM  360 (363)
Q Consensus       348 ~~gsL~~~l~~~~  360 (363)
                      ++|+|.+++....
T Consensus        88 ~~~~L~~~l~~~~  100 (269)
T 4hcu_A           88 EHGCLSDYLRTQR  100 (269)
T ss_dssp             TTCBHHHHHHTTT
T ss_pred             CCCcHHHHHHhcC
Confidence            9999999997644

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.41  E-value=4.3e-13  Score=123.16  Aligned_cols=91  Identities=29%  Similarity=0.424  Sum_probs=79.5

Q ss_pred             cCCCcCceecccCceEEEEEEcC----CCCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTLP----GGEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLV  343 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~~----~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  343 (363)
                      +.|...+.||+|+||.||++.+.    .+..||||++... .....+.|.+|+.++.+++||||+++++++...+..+||
T Consensus        49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  128 (325)
T 3kul_A           49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIV  128 (325)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEE
T ss_pred             hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEE
Confidence            45777899999999999999963    3456999999764 445567899999999999999999999999999999999


Q ss_pred             EEccCCCChhHHhhcC
Q 017984          344 YEFVPNQSLLDNLFDK  359 (363)
Q Consensus       344 ~Ey~~~gsL~~~l~~~  359 (363)
                      |||+++|+|.++|...
T Consensus       129 ~e~~~~~~L~~~l~~~  144 (325)
T 3kul_A          129 TEYMENGSLDTFLRTH  144 (325)
T ss_dssp             EECCTTCBHHHHHHTT
T ss_pred             eeCCCCCcHHHHHHhc
Confidence            9999999999999654

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.41  E-value=1.7e-13  Score=127.31  Aligned_cols=105  Identities=25%  Similarity=0.307  Sum_probs=88.7

Q ss_pred             ccccchHHHHHhccCCCcCceecccCceEEEEEEc------CCCCEEEEEEeccC-ChhhHHHHHHHHHHHhcC-CCCCc
Q 017984          256 KLNFSYETLEKATNYFHESNKLGQGGSGSVYKGTL------PGGEAVAVKRLFYN-TTQWVDHFFNEVNLISGI-NHKNL  327 (363)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~------~~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l-~h~ni  327 (363)
                      ...+....+....++|...+.||+|+||.||++.+      .+++.||||+++.. .....+.|.+|++++.++ +||||
T Consensus         9 ~~~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpni   88 (359)
T 3vhe_A            9 RLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNV   88 (359)
T ss_dssp             GSCCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTB
T ss_pred             hCCCCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcce
Confidence            34466677778889999999999999999999973      34679999999764 344556799999999999 79999


Q ss_pred             cceeeEEEeCC-eeEEEEEccCCCChhHHhhcCC
Q 017984          328 VKLLGCSITGP-ESLLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       328 v~l~~~~~~~~-~~~lv~Ey~~~gsL~~~l~~~~  360 (363)
                      +++++++...+ ..++||||+++|+|.++|....
T Consensus        89 v~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~  122 (359)
T 3vhe_A           89 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKR  122 (359)
T ss_dssp             CCEEEEECSTTSCCEEEEECCTTEEHHHHHHTTT
T ss_pred             eeeeeeeecCCCceEEEEEecCCCcHHHHHHhcc
Confidence            99999988755 4899999999999999998754

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.41  E-value=8.6e-13  Score=124.16  Aligned_cols=92  Identities=21%  Similarity=0.296  Sum_probs=83.2

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEc
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      .+.|...+.||+|+||.||++.. .+|+.+|+|++..........+.+|+.+|..++||||+++++++......+|||||
T Consensus        50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~  129 (387)
T 1kob_A           50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF  129 (387)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred             ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence            46788999999999999999996 46889999999876665667899999999999999999999999999999999999


Q ss_pred             cCCCChhHHhhcC
Q 017984          347 VPNQSLLDNLFDK  359 (363)
Q Consensus       347 ~~~gsL~~~l~~~  359 (363)
                      +++|+|.+++...
T Consensus       130 ~~gg~L~~~l~~~  142 (387)
T 1kob_A          130 LSGGELFDRIAAE  142 (387)
T ss_dssp             CCCCBHHHHTTCT
T ss_pred             CCCCcHHHHHHhh
Confidence            9999999999764

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.41  E-value=6.8e-13  Score=120.01  Aligned_cols=93  Identities=24%  Similarity=0.338  Sum_probs=81.6

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLV  343 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  343 (363)
                      .++|...+.||+|+||.||++.. .+++.||+|.+...   .....+.|.+|+.++.+++||||+++++++..++..++|
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv   89 (294)
T 4eqm_A           10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV   89 (294)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred             hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence            45688899999999999999995 46899999998643   344567899999999999999999999999999999999


Q ss_pred             EEccCCCChhHHhhcCC
Q 017984          344 YEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       344 ~Ey~~~gsL~~~l~~~~  360 (363)
                      |||+++|+|.+++....
T Consensus        90 ~e~~~g~~L~~~l~~~~  106 (294)
T 4eqm_A           90 MEYIEGPTLSEYIESHG  106 (294)
T ss_dssp             EECCCSCBHHHHHHHHC
T ss_pred             EeCCCCCCHHHHHHhcC
Confidence            99999999999987543

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.41  E-value=1.1e-13  Score=131.11  Aligned_cols=101  Identities=17%  Similarity=0.175  Sum_probs=85.0

Q ss_pred             hHHHHHhccCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCccceeeEEEe
Q 017984          261 YETLEKATNYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYNT---TQWVDHFFNEVNLISGINHKNLVKLLGCSIT  336 (363)
Q Consensus       261 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~  336 (363)
                      +.++....++|...+.||+|+||.||++... +++.||+|++....   ....+.+.+|+.++..++||||+++++++.+
T Consensus        61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~  140 (410)
T 3v8s_A           61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD  140 (410)
T ss_dssp             HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred             HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence            3455566788999999999999999999974 58899999996421   1122348899999999999999999999999


Q ss_pred             CCeeEEEEEccCCCChhHHhhcCCC
Q 017984          337 GPESLLVYEFVPNQSLLDNLFDKML  361 (363)
Q Consensus       337 ~~~~~lv~Ey~~~gsL~~~l~~~~~  361 (363)
                      .+.++|||||+++|+|.++|.+...
T Consensus       141 ~~~~~lV~E~~~gg~L~~~l~~~~~  165 (410)
T 3v8s_A          141 DRYLYMVMEYMPGGDLVNLMSNYDV  165 (410)
T ss_dssp             SSEEEEEECCCTTEEHHHHHHHCCC
T ss_pred             CCEEEEEEeCCCCCcHHHHHHcCCC
Confidence            9999999999999999999976543

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.41  E-value=6.8e-13  Score=123.77  Aligned_cols=93  Identities=17%  Similarity=0.296  Sum_probs=82.1

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVY  344 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  344 (363)
                      .++|...+.||+|+||.||++.. .+|+.||+|++...  .....+.+.+|+.++.+++||||+++++++...+..+|||
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~  107 (362)
T 2bdw_A           28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF  107 (362)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            45688999999999999999996 46899999999754  3445567999999999999999999999999999999999


Q ss_pred             EccCCCChhHHhhcCC
Q 017984          345 EFVPNQSLLDNLFDKM  360 (363)
Q Consensus       345 Ey~~~gsL~~~l~~~~  360 (363)
                      ||+++|+|.++|..+.
T Consensus       108 e~~~gg~L~~~l~~~~  123 (362)
T 2bdw_A          108 DLVTGGELFEDIVARE  123 (362)
T ss_dssp             CCCCSCBHHHHHTTCS
T ss_pred             ecCCCCCHHHHHHHcC
Confidence            9999999999887653

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.40  E-value=4.5e-13  Score=123.74  Aligned_cols=92  Identities=24%  Similarity=0.185  Sum_probs=80.5

Q ss_pred             cCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVY  344 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  344 (363)
                      ++|...+.||+|+||.||++.. .+|+.||+|+++..   .......+.+|+.++..++||||+++++++...+.++|||
T Consensus         5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   84 (337)
T 1o6l_A            5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM   84 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence            5688899999999999999996 46899999999643   2234567899999999999999999999999999999999


Q ss_pred             EccCCCChhHHhhcCC
Q 017984          345 EFVPNQSLLDNLFDKM  360 (363)
Q Consensus       345 Ey~~~gsL~~~l~~~~  360 (363)
                      ||+++|+|.++|..+.
T Consensus        85 E~~~gg~L~~~l~~~~  100 (337)
T 1o6l_A           85 EYANGGELFFHLSRER  100 (337)
T ss_dssp             ECCTTCBHHHHHHHHS
T ss_pred             eCCCCCcHHHHHHhcC
Confidence            9999999999987543

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.40  E-value=2.5e-13  Score=127.36  Aligned_cols=94  Identities=23%  Similarity=0.372  Sum_probs=82.1

Q ss_pred             HhccCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEE
Q 017984          266 KATNYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLV  343 (363)
Q Consensus       266 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  343 (363)
                      ...++|...+.||+|+||.||++.+. +++.||||+++.. .....++|.+|+.+|.+++||||+++++++...+..+||
T Consensus       111 ~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv  190 (377)
T 3cbl_A          111 LNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIV  190 (377)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred             EchHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEE
Confidence            34567888899999999999999975 6899999999754 334456799999999999999999999999999999999


Q ss_pred             EEccCCCChhHHhhcC
Q 017984          344 YEFVPNQSLLDNLFDK  359 (363)
Q Consensus       344 ~Ey~~~gsL~~~l~~~  359 (363)
                      |||+++|+|.++|..+
T Consensus       191 ~e~~~~g~L~~~l~~~  206 (377)
T 3cbl_A          191 MELVQGGDFLTFLRTE  206 (377)
T ss_dssp             EECCTTCBHHHHHHHH
T ss_pred             EEcCCCCCHHHHHHhc
Confidence            9999999999998753

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.40  E-value=7.7e-13  Score=121.56  Aligned_cols=92  Identities=25%  Similarity=0.328  Sum_probs=80.5

Q ss_pred             cCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCCh------hhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTT------QWVDHFFNEVNLISGINHKNLVKLLGCSITGPESL  341 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  341 (363)
                      +.|...+.||+|+||.||++.. .+|+.||+|++.....      ...+.+.+|+.++.+++||||+++++++......+
T Consensus        11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~   90 (326)
T 2y0a_A           11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI   90 (326)
T ss_dssp             HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence            4578889999999999999996 4689999999975322      13577999999999999999999999999999999


Q ss_pred             EEEEccCCCChhHHhhcCC
Q 017984          342 LVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       342 lv~Ey~~~gsL~~~l~~~~  360 (363)
                      |||||+++|+|.+++....
T Consensus        91 lv~e~~~~~~L~~~l~~~~  109 (326)
T 2y0a_A           91 LILELVAGGELFDFLAEKE  109 (326)
T ss_dssp             EEEECCCSCBHHHHHTTSS
T ss_pred             EEEEcCCCCCHHHHHHhcC
Confidence            9999999999999997643

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.40  E-value=5.7e-13  Score=124.81  Aligned_cols=87  Identities=25%  Similarity=0.374  Sum_probs=73.6

Q ss_pred             cCceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEccCCCC
Q 017984          273 ESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQS  351 (363)
Q Consensus       273 ~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~~~gs  351 (363)
                      ..+.||+|+||.||++.. .+|+.||+|+++.......+.|.+|+.++.+++||||+++++++...+..+|||||+++|+
T Consensus        93 ~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~  172 (373)
T 2x4f_A           93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGE  172 (373)
T ss_dssp             EEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCE
T ss_pred             cceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCc
Confidence            356899999999999986 5689999999987766667789999999999999999999999999999999999999999


Q ss_pred             hhHHhhcC
Q 017984          352 LLDNLFDK  359 (363)
Q Consensus       352 L~~~l~~~  359 (363)
                      |.++|.++
T Consensus       173 L~~~l~~~  180 (373)
T 2x4f_A          173 LFDRIIDE  180 (373)
T ss_dssp             EHHHHHHT
T ss_pred             HHHHHHhc
Confidence            99988654

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.40  E-value=4e-13  Score=119.50  Aligned_cols=92  Identities=25%  Similarity=0.382  Sum_probs=80.9

Q ss_pred             ccCCCcCceecccCceEEEEEEcCCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeC--CeeEEE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITG--PESLLV  343 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv  343 (363)
                      .++|...+.||+|+||.||++... ++.||||++...  .....+.|.+|+.++.+++||||+++++++...  +..++|
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv   87 (271)
T 3kmu_A            9 FKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLI   87 (271)
T ss_dssp             GGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEE
T ss_pred             HHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEee
Confidence            356788899999999999999985 889999999754  345567799999999999999999999999876  788999


Q ss_pred             EEccCCCChhHHhhcCC
Q 017984          344 YEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       344 ~Ey~~~gsL~~~l~~~~  360 (363)
                      |||+++|+|.++|....
T Consensus        88 ~e~~~~~~L~~~l~~~~  104 (271)
T 3kmu_A           88 THWMPYGSLYNVLHEGT  104 (271)
T ss_dssp             EECCTTCBHHHHHHSCS
T ss_pred             ecccCCCcHHHHHhhcc
Confidence            99999999999998754

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.39  E-value=4.1e-13  Score=125.63  Aligned_cols=93  Identities=24%  Similarity=0.341  Sum_probs=80.7

Q ss_pred             ccCCCcCceecccCceEEEEEEc--------CCCCEEEEEEeccC-ChhhHHHHHHHHHHHhcC-CCCCccceeeEEEeC
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL--------PGGEAVAVKRLFYN-TTQWVDHFFNEVNLISGI-NHKNLVKLLGCSITG  337 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~--------~~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~  337 (363)
                      .++|...+.||+|+||.||++..        .++..||||+++.. .....+.+.+|+.++..+ +||||+++++++...
T Consensus        80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~  159 (370)
T 2psq_A           80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD  159 (370)
T ss_dssp             GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred             HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence            46788899999999999999984        23557999999764 334567899999999999 899999999999999


Q ss_pred             CeeEEEEEccCCCChhHHhhcCC
Q 017984          338 PESLLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       338 ~~~~lv~Ey~~~gsL~~~l~~~~  360 (363)
                      +.++|||||+++|+|.++|....
T Consensus       160 ~~~~lv~e~~~~g~L~~~l~~~~  182 (370)
T 2psq_A          160 GPLYVIVEYASKGNLREYLRARR  182 (370)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHTC
T ss_pred             CCEEEEEEcCCCCCHHHHHHhhC
Confidence            99999999999999999998654

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.39  E-value=4.3e-13  Score=123.91  Aligned_cols=95  Identities=25%  Similarity=0.291  Sum_probs=82.6

Q ss_pred             HHHHhccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC-----ChhhHHHHHHHHHHHhcCCCCCccceeeEEEe
Q 017984          263 TLEKATNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN-----TTQWVDHFFNEVNLISGINHKNLVKLLGCSIT  336 (363)
Q Consensus       263 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~  336 (363)
                      ++....++|...+.||+|+||.||++.. .+++.||+|++...     .....+.+.+|+.++.+++||||+++++++.+
T Consensus        20 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~   99 (345)
T 3hko_A           20 SLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYED   99 (345)
T ss_dssp             CHHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred             hhhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhcc
Confidence            4455667799999999999999999996 56889999998642     33456789999999999999999999999999


Q ss_pred             CCeeEEEEEccCCCChhHHhh
Q 017984          337 GPESLLVYEFVPNQSLLDNLF  357 (363)
Q Consensus       337 ~~~~~lv~Ey~~~gsL~~~l~  357 (363)
                      .+..+|||||+++|+|.++|.
T Consensus       100 ~~~~~lv~e~~~gg~L~~~l~  120 (345)
T 3hko_A          100 EQYICLVMELCHGGHLLDKLN  120 (345)
T ss_dssp             SSEEEEEEECCCSCBHHHHEE
T ss_pred             CCeEEEEEeCCCCCcHHHHHH
Confidence            999999999999999999985

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.39  E-value=5.9e-13  Score=122.18  Aligned_cols=92  Identities=25%  Similarity=0.326  Sum_probs=78.6

Q ss_pred             ccCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYNT-TQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYE  345 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  345 (363)
                      .++|...+.||+|+||.||++... +++.||||++.... ....+.+.+|+.++..++||||+++++++..++..+||||
T Consensus         6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e   85 (323)
T 3tki_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE   85 (323)
T ss_dssp             TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence            367889999999999999999964 68999999997542 2334568999999999999999999999999999999999


Q ss_pred             ccCCCChhHHhhcC
Q 017984          346 FVPNQSLLDNLFDK  359 (363)
Q Consensus       346 y~~~gsL~~~l~~~  359 (363)
                      |+++|+|.+++...
T Consensus        86 ~~~~~~L~~~l~~~   99 (323)
T 3tki_A           86 YCSGGELFDRIEPD   99 (323)
T ss_dssp             CCTTEEGGGGSBTT
T ss_pred             cCCCCcHHHHHhhc
Confidence            99999999998765

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.39  E-value=5e-13  Score=120.71  Aligned_cols=92  Identities=30%  Similarity=0.438  Sum_probs=80.6

Q ss_pred             ccCCCcCceecccCceEEEEEEc-----CCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEe--CCee
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-----PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSIT--GPES  340 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~  340 (363)
                      .++|...+.||+|+||.||++.+     .+++.||||++........+.|.+|+.++.+++||||+++++++..  ....
T Consensus         9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   88 (295)
T 3ugc_A            9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL   88 (295)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred             HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence            35678889999999999999984     3588999999987777777889999999999999999999999865  3568


Q ss_pred             EEEEEccCCCChhHHhhcC
Q 017984          341 LLVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       341 ~lv~Ey~~~gsL~~~l~~~  359 (363)
                      ++||||+++|+|.+++...
T Consensus        89 ~lv~e~~~~~~L~~~l~~~  107 (295)
T 3ugc_A           89 KLIMEYLPYGSLRDYLQKH  107 (295)
T ss_dssp             EEEEECCTTCBHHHHHHHC
T ss_pred             EEEEEeCCCCCHHHHHHhc
Confidence            9999999999999999764

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.39  E-value=1.4e-12  Score=119.58  Aligned_cols=92  Identities=14%  Similarity=0.209  Sum_probs=81.3

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEc
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      .++|...+.||+|+||.||++.. .+++.+|+|.+.... .....+.+|+.++..++||||+++++++...+..+|||||
T Consensus         4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~   82 (321)
T 1tki_A            4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF   82 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence            46788899999999999999996 458899999997543 3456689999999999999999999999999999999999


Q ss_pred             cCCCChhHHhhcCC
Q 017984          347 VPNQSLLDNLFDKM  360 (363)
Q Consensus       347 ~~~gsL~~~l~~~~  360 (363)
                      +++|+|.+++....
T Consensus        83 ~~g~~L~~~l~~~~   96 (321)
T 1tki_A           83 ISGLDIFERINTSA   96 (321)
T ss_dssp             CCCCBHHHHHTSSS
T ss_pred             CCCCCHHHHHHhcC
Confidence            99999999997653

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.39  E-value=4.5e-13  Score=123.57  Aligned_cols=96  Identities=28%  Similarity=0.404  Sum_probs=83.5

Q ss_pred             HHHhccCCCcCceecccCceEEEEEEcC------CCCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEe
Q 017984          264 LEKATNYFHESNKLGQGGSGSVYKGTLP------GGEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSIT  336 (363)
Q Consensus       264 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~  336 (363)
                      +....++|...+.||+|+||.||++...      +++.||||+++.. .....+.|.+|+.++.+++||||+++++++..
T Consensus        42 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~  121 (343)
T 1luf_A           42 LEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAV  121 (343)
T ss_dssp             TBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred             eEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc
Confidence            3445678899999999999999999963      3478999999764 34456779999999999999999999999999


Q ss_pred             CCeeEEEEEccCCCChhHHhhcC
Q 017984          337 GPESLLVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       337 ~~~~~lv~Ey~~~gsL~~~l~~~  359 (363)
                      .+..+|||||+++|+|.++|...
T Consensus       122 ~~~~~lv~e~~~~~~L~~~l~~~  144 (343)
T 1luf_A          122 GKPMCLLFEYMAYGDLNEFLRSM  144 (343)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHHT
T ss_pred             CCceEEEEecCCCCcHHHHHHHh
Confidence            99999999999999999999764

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.39  E-value=3e-13  Score=130.07  Aligned_cols=96  Identities=29%  Similarity=0.389  Sum_probs=83.3

Q ss_pred             HHHHHhccCCCcCceecccCceEEEEEEcCCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeE
Q 017984          262 ETLEKATNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESL  341 (363)
Q Consensus       262 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  341 (363)
                      ..+....++|...+.||+|+||.||++.+.++..||||+++... ...+.|.+|+.+|.+++||||+++++++. .+..+
T Consensus       181 ~~~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~  258 (454)
T 1qcf_A          181 DAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIY  258 (454)
T ss_dssp             TCSBCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCE
T ss_pred             cceeechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccE
Confidence            44455667788999999999999999999888899999997643 34678999999999999999999999986 66789


Q ss_pred             EEEEccCCCChhHHhhcC
Q 017984          342 LVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       342 lv~Ey~~~gsL~~~l~~~  359 (363)
                      |||||+++|+|.++|...
T Consensus       259 lv~e~~~~g~L~~~l~~~  276 (454)
T 1qcf_A          259 IITEFMAKGSLLDFLKSD  276 (454)
T ss_dssp             EEECCCTTCBHHHHHHSH
T ss_pred             EEEeecCCCcHHHHHHhc
Confidence            999999999999999753

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.39  E-value=6.5e-13  Score=118.77  Aligned_cols=93  Identities=22%  Similarity=0.353  Sum_probs=81.8

Q ss_pred             ccCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEc
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      .++|...+.||+|+||.||++... ++..+|+|++........+.+.+|++++.+++||||+++++++...+..++||||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   87 (277)
T 3f3z_A            8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL   87 (277)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence            456888999999999999999964 4779999999765445567899999999999999999999999999999999999


Q ss_pred             cCCCChhHHhhcCC
Q 017984          347 VPNQSLLDNLFDKM  360 (363)
Q Consensus       347 ~~~gsL~~~l~~~~  360 (363)
                      +++++|.+++..+.
T Consensus        88 ~~~~~L~~~~~~~~  101 (277)
T 3f3z_A           88 CTGGELFERVVHKR  101 (277)
T ss_dssp             CCSCBHHHHHHHHC
T ss_pred             cCCCcHHHHHHHcC
Confidence            99999999886543

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.38  E-value=1.5e-12  Score=118.75  Aligned_cols=91  Identities=20%  Similarity=0.293  Sum_probs=79.3

Q ss_pred             cCCCc-CceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcC-CCCCccceeeEEEeCCeeEEEEE
Q 017984          269 NYFHE-SNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGI-NHKNLVKLLGCSITGPESLLVYE  345 (363)
Q Consensus       269 ~~~~~-~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E  345 (363)
                      +.|.. .+.||+|+||.||++.. .+++.||||++........+.+.+|+.++.++ +||||+++++++...+..+||||
T Consensus        12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e   91 (316)
T 2ac3_A           12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE   91 (316)
T ss_dssp             TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEE
Confidence            44555 47899999999999995 46899999999866555567899999999985 79999999999999999999999


Q ss_pred             ccCCCChhHHhhcC
Q 017984          346 FVPNQSLLDNLFDK  359 (363)
Q Consensus       346 y~~~gsL~~~l~~~  359 (363)
                      |+++|+|.+++..+
T Consensus        92 ~~~~~~L~~~l~~~  105 (316)
T 2ac3_A           92 KMRGGSILSHIHKR  105 (316)
T ss_dssp             CCTTCBHHHHHHHH
T ss_pred             cCCCCcHHHHHhcc
Confidence            99999999998754

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.38  E-value=5.6e-13  Score=123.80  Aligned_cols=90  Identities=18%  Similarity=0.241  Sum_probs=78.4

Q ss_pred             cCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC-----ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN-----TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLL  342 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  342 (363)
                      +.|...+.||+|+||.||++.. .+|+.||||++...     .....+.+.+|+.++..++||||+++++++...+..+|
T Consensus        24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l  103 (351)
T 3c0i_A           24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM  103 (351)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence            4578889999999999999986 46899999998632     12235679999999999999999999999999999999


Q ss_pred             EEEccCCCChhHHhhc
Q 017984          343 VYEFVPNQSLLDNLFD  358 (363)
Q Consensus       343 v~Ey~~~gsL~~~l~~  358 (363)
                      ||||+++|+|.++|.+
T Consensus       104 v~e~~~g~~L~~~l~~  119 (351)
T 3c0i_A          104 VFEFMDGADLCFEIVK  119 (351)
T ss_dssp             EEECCSSCBHHHHHHH
T ss_pred             EEeCCCCCCHHHHHHH
Confidence            9999999999888754

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.38  E-value=1.4e-12  Score=122.63  Aligned_cols=93  Identities=22%  Similarity=0.267  Sum_probs=82.4

Q ss_pred             hccCCCcCceeccc--CceEEEEEEcC-CCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeE
Q 017984          267 ATNYFHESNKLGQG--GSGSVYKGTLP-GGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESL  341 (363)
Q Consensus       267 ~~~~~~~~~~lg~G--~~g~Vy~~~~~-~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  341 (363)
                      ..++|...+.||+|  +||.||++... +|+.||||++...  .....+.+.+|+.+++.++|||||++++++...+..+
T Consensus        23 ~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~  102 (389)
T 3gni_B           23 EGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELW  102 (389)
T ss_dssp             CGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred             CCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEE
Confidence            34568899999999  99999999974 6899999999753  3455677899999999999999999999999999999


Q ss_pred             EEEEccCCCChhHHhhcC
Q 017984          342 LVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       342 lv~Ey~~~gsL~~~l~~~  359 (363)
                      |||||+++|+|.+++...
T Consensus       103 lv~e~~~~~~L~~~l~~~  120 (389)
T 3gni_B          103 VVTSFMAYGSAKDLICTH  120 (389)
T ss_dssp             EEEECCTTCBHHHHHHHT
T ss_pred             EEEEccCCCCHHHHHhhh
Confidence            999999999999998764

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.38  E-value=6.4e-13  Score=119.52  Aligned_cols=93  Identities=30%  Similarity=0.423  Sum_probs=81.5

Q ss_pred             ccCCCcCceecccCceEEEEEEcCC-C-------CEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCe
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLPG-G-------EAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPE  339 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~~-g-------~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  339 (363)
                      .++|...+.||+|+||.||++.... +       ..||+|++........+.|.+|+.++.+++||||+++++++..++.
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   86 (289)
T 4fvq_A            7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE   86 (289)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred             hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence            3567888999999999999998632 3       4799999976666667889999999999999999999999999999


Q ss_pred             eEEEEEccCCCChhHHhhcCC
Q 017984          340 SLLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       340 ~~lv~Ey~~~gsL~~~l~~~~  360 (363)
                      .++||||+++|+|.+++....
T Consensus        87 ~~lv~e~~~~~~L~~~l~~~~  107 (289)
T 4fvq_A           87 NILVQEFVKFGSLDTYLKKNK  107 (289)
T ss_dssp             CEEEEECCTTCBHHHHHHHTG
T ss_pred             CEEEEECCCCCCHHHHHHhCC
Confidence            999999999999999997653

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.38  E-value=7.4e-13  Score=121.29  Aligned_cols=93  Identities=19%  Similarity=0.251  Sum_probs=80.7

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLV  343 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  343 (363)
                      .++|...+.||+|+||.||++.. .+|+.||+|+++..   .....+.+.+|+.++..++||||+++++++.+.+..+||
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv   84 (318)
T 1fot_A            5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI   84 (318)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence            35688899999999999999996 46899999999743   123356788999999999999999999999999999999


Q ss_pred             EEccCCCChhHHhhcCC
Q 017984          344 YEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       344 ~Ey~~~gsL~~~l~~~~  360 (363)
                      |||+++|+|.++|....
T Consensus        85 ~e~~~gg~L~~~l~~~~  101 (318)
T 1fot_A           85 MDYIEGGELFSLLRKSQ  101 (318)
T ss_dssp             ECCCCSCBHHHHHHHTS
T ss_pred             EeCCCCCCHHHHHHHcC
Confidence            99999999999997643

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.37  E-value=9.4e-13  Score=117.16  Aligned_cols=91  Identities=29%  Similarity=0.368  Sum_probs=80.9

Q ss_pred             ccCCCcCceecccCceEEEEEEcCCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEcc
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFV  347 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~  347 (363)
                      .++|...+.||+|+||.||++...++..||+|++..... ..+++.+|+.++.+++||||+++++++...+..++||||+
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   85 (268)
T 3sxs_A            7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI   85 (268)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred             hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEcc
Confidence            456788899999999999999988888999999976432 3467999999999999999999999999999999999999


Q ss_pred             CCCChhHHhhcC
Q 017984          348 PNQSLLDNLFDK  359 (363)
Q Consensus       348 ~~gsL~~~l~~~  359 (363)
                      ++++|.+++...
T Consensus        86 ~~~~L~~~l~~~   97 (268)
T 3sxs_A           86 SNGCLLNYLRSH   97 (268)
T ss_dssp             TTCBHHHHHHHH
T ss_pred             CCCcHHHHHHHc
Confidence            999999998753

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.37  E-value=6.6e-13  Score=122.05  Aligned_cols=92  Identities=25%  Similarity=0.334  Sum_probs=74.6

Q ss_pred             ccCCCcCceecccCceEEEEEEc----CCCCEEEEEEeccCC----hhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCe
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL----PGGEAVAVKRLFYNT----TQWVDHFFNEVNLISGINHKNLVKLLGCSITGPE  339 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~----~~g~~vavK~l~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  339 (363)
                      .++|...+.||+|+||.||++..    .+++.||+|+++...    ......+.+|+.++..++||||+++++++...+.
T Consensus        16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~   95 (327)
T 3a62_A           16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK   95 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred             HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence            45688899999999999999986    468999999997542    2334568899999999999999999999999999


Q ss_pred             eEEEEEccCCCChhHHhhcC
Q 017984          340 SLLVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       340 ~~lv~Ey~~~gsL~~~l~~~  359 (363)
                      .+|||||+++|+|.++|...
T Consensus        96 ~~lv~e~~~~~~L~~~l~~~  115 (327)
T 3a62_A           96 LYLILEYLSGGELFMQLERE  115 (327)
T ss_dssp             EEEEEECCTTEEHHHHHHHH
T ss_pred             EEEEEeCCCCCcHHHHHHhC
Confidence            99999999999999998754

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.37  E-value=1e-12  Score=117.93  Aligned_cols=92  Identities=25%  Similarity=0.374  Sum_probs=78.8

Q ss_pred             HhccCCCcCceecccCceEEEEEEcCCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEE
Q 017984          266 KATNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYE  345 (363)
Q Consensus       266 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  345 (363)
                      ...++|...+.||+|+||.||++...++..||+|++..... ..+++.+|++++.+++||||+++++++...+..++|||
T Consensus        21 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   99 (283)
T 3gen_A           21 IDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITE   99 (283)
T ss_dssp             CCGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEC
T ss_pred             CCHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEe
Confidence            34567888899999999999999988888999999975432 34679999999999999999999999999999999999


Q ss_pred             ccCCCChhHHhhc
Q 017984          346 FVPNQSLLDNLFD  358 (363)
Q Consensus       346 y~~~gsL~~~l~~  358 (363)
                      |+++|+|.+++.+
T Consensus       100 ~~~~~~L~~~l~~  112 (283)
T 3gen_A          100 YMANGCLLNYLRE  112 (283)
T ss_dssp             CCTTCBHHHHHHC
T ss_pred             ccCCCcHHHHHHH
Confidence            9999999999976

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.37  E-value=2.8e-13  Score=128.49  Aligned_cols=100  Identities=17%  Similarity=0.131  Sum_probs=85.9

Q ss_pred             cchHHHHHhccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCccceeeEE
Q 017984          259 FSYETLEKATNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNT---TQWVDHFFNEVNLISGINHKNLVKLLGCS  334 (363)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~  334 (363)
                      +.+.++....++|...+.||+|+||.||++.. .+|+.||||++....   ....+.+.+|..++..++||||+++++++
T Consensus        51 ~~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~  130 (412)
T 2vd5_A           51 VRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAF  130 (412)
T ss_dssp             HHHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred             hhhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence            44556666778899999999999999999997 468999999996421   12234588999999999999999999999


Q ss_pred             EeCCeeEEEEEccCCCChhHHhhc
Q 017984          335 ITGPESLLVYEFVPNQSLLDNLFD  358 (363)
Q Consensus       335 ~~~~~~~lv~Ey~~~gsL~~~l~~  358 (363)
                      .+.+.++|||||+++|+|.++|.+
T Consensus       131 ~~~~~~~lVmE~~~gg~L~~~l~~  154 (412)
T 2vd5_A          131 QDENYLYLVMEYYVGGDLLTLLSK  154 (412)
T ss_dssp             ECSSEEEEEECCCCSCBHHHHHHH
T ss_pred             eeCCEEEEEEcCCCCCcHHHHHHh
Confidence            999999999999999999999975

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.36  E-value=1.2e-12  Score=125.75  Aligned_cols=91  Identities=27%  Similarity=0.427  Sum_probs=79.4

Q ss_pred             hccCCCcCceecccCceEEEEEEcCCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCC-eeEEEEE
Q 017984          267 ATNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGP-ESLLVYE  345 (363)
Q Consensus       267 ~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lv~E  345 (363)
                      ..++|...+.||+|+||.||++.+. |+.||||+++...  ..+.|.+|+.+|.+++||||+++++++...+ ..+||||
T Consensus       191 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e  267 (450)
T 1k9a_A          191 NMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE  267 (450)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEE
T ss_pred             ChHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEE
Confidence            4566788899999999999999986 7899999997643  3467999999999999999999999987765 7999999


Q ss_pred             ccCCCChhHHhhcCC
Q 017984          346 FVPNQSLLDNLFDKM  360 (363)
Q Consensus       346 y~~~gsL~~~l~~~~  360 (363)
                      |+++|+|.++|..+.
T Consensus       268 ~~~~g~L~~~l~~~~  282 (450)
T 1k9a_A          268 YMAKGSLVDYLRSRG  282 (450)
T ss_dssp             CCTTCBHHHHHHHHC
T ss_pred             ecCCCcHHHHHHhcC
Confidence            999999999998643

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.36  E-value=6.4e-13  Score=129.13  Aligned_cols=93  Identities=34%  Similarity=0.482  Sum_probs=81.7

Q ss_pred             HhccCCCcCceecccCceEEEEEEcCC-CCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEE
Q 017984          266 KATNYFHESNKLGQGGSGSVYKGTLPG-GEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVY  344 (363)
Q Consensus       266 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~-g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  344 (363)
                      ...++|...+.||+|+||.||+|.+.. +..||||+++... ...++|.+|+.+|.+++||||+++++++...+..+|||
T Consensus       217 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~  295 (495)
T 1opk_A          217 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT  295 (495)
T ss_dssp             CCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred             cCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEE
Confidence            345668888999999999999999754 8899999997543 23577999999999999999999999999999999999


Q ss_pred             EccCCCChhHHhhcC
Q 017984          345 EFVPNQSLLDNLFDK  359 (363)
Q Consensus       345 Ey~~~gsL~~~l~~~  359 (363)
                      ||+++|+|.++|...
T Consensus       296 E~~~~g~L~~~l~~~  310 (495)
T 1opk_A          296 EFMTYGNLLDYLREC  310 (495)
T ss_dssp             ECCTTCBHHHHHHHS
T ss_pred             EccCCCCHHHHHHhc
Confidence            999999999999753

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.36  E-value=1.3e-12  Score=121.27  Aligned_cols=92  Identities=25%  Similarity=0.343  Sum_probs=74.7

Q ss_pred             hccCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEE
Q 017984          267 ATNYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYE  345 (363)
Q Consensus       267 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  345 (363)
                      ..+.|...+.||+|+||.||++... +++.||||++....  ..+.+.+|+.++.+++||||+++++++...+..+||||
T Consensus        51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  128 (349)
T 2w4o_A           51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLE  128 (349)
T ss_dssp             GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEE
Confidence            4567888999999999999999974 58899999997543  23568899999999999999999999999999999999


Q ss_pred             ccCCCChhHHhhcCC
Q 017984          346 FVPNQSLLDNLFDKM  360 (363)
Q Consensus       346 y~~~gsL~~~l~~~~  360 (363)
                      |+++|+|.+++.++.
T Consensus       129 ~~~~~~L~~~l~~~~  143 (349)
T 2w4o_A          129 LVTGGELFDRIVEKG  143 (349)
T ss_dssp             CCCSCBHHHHHTTCS
T ss_pred             eCCCCCHHHHHHhcC
Confidence            999999999987654

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.36  E-value=3e-12  Score=115.39  Aligned_cols=90  Identities=27%  Similarity=0.326  Sum_probs=78.3

Q ss_pred             CCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEccC
Q 017984          270 YFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVP  348 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~~  348 (363)
                      .+.....||+|+||.||++.. .+++.||||.+........+.+.+|+.++..++||||+++++++...+..++||||++
T Consensus        23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~  102 (295)
T 2clq_A           23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVP  102 (295)
T ss_dssp             TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred             CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCC
Confidence            345566999999999999996 5688999999987666666789999999999999999999999999999999999999


Q ss_pred             CCChhHHhhcC
Q 017984          349 NQSLLDNLFDK  359 (363)
Q Consensus       349 ~gsL~~~l~~~  359 (363)
                      +++|.+++...
T Consensus       103 ~~~L~~~l~~~  113 (295)
T 2clq_A          103 GGSLSALLRSK  113 (295)
T ss_dssp             EEEHHHHHHHT
T ss_pred             CCCHHHHHHhh
Confidence            99999999764

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.36  E-value=1.4e-12  Score=115.85  Aligned_cols=92  Identities=24%  Similarity=0.326  Sum_probs=81.4

Q ss_pred             ccCCCcCceecccCceEEEEEEcCCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEcc
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFV  347 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~  347 (363)
                      .++|...+.||+|+||.||++...+++.||+|++..... ..+.+.+|+.++.+++||||+++++++...+..++||||+
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   85 (267)
T 3t9t_A            7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFM   85 (267)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCC
T ss_pred             hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCC
Confidence            356778899999999999999988888999999976432 3467999999999999999999999999999999999999


Q ss_pred             CCCChhHHhhcCC
Q 017984          348 PNQSLLDNLFDKM  360 (363)
Q Consensus       348 ~~gsL~~~l~~~~  360 (363)
                      ++++|.+++....
T Consensus        86 ~~~~L~~~~~~~~   98 (267)
T 3t9t_A           86 EHGCLSDYLRTQR   98 (267)
T ss_dssp             TTCBHHHHHHHTT
T ss_pred             CCCcHHHHHhhCc
Confidence            9999999997643

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.36  E-value=1.5e-12  Score=120.63  Aligned_cols=91  Identities=22%  Similarity=0.249  Sum_probs=79.8

Q ss_pred             cCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccC---ChhhHHHHHHHHHHHhcC-CCCCccceeeEEEeCCeeEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYN---TTQWVDHFFNEVNLISGI-NHKNLVKLLGCSITGPESLLV  343 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv  343 (363)
                      ++|...+.||+|+||.||++... +++.||+|++...   .....+.+.+|..++.++ +||||+++++++...+.++||
T Consensus         9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv   88 (345)
T 3a8x_A            9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV   88 (345)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence            46788899999999999999974 5889999999753   344566789999999988 899999999999999999999


Q ss_pred             EEccCCCChhHHhhcC
Q 017984          344 YEFVPNQSLLDNLFDK  359 (363)
Q Consensus       344 ~Ey~~~gsL~~~l~~~  359 (363)
                      |||+++|+|.+++...
T Consensus        89 ~e~~~gg~L~~~l~~~  104 (345)
T 3a8x_A           89 IEYVNGGDLMFHMQRQ  104 (345)
T ss_dssp             ECCCCSCBHHHHHHHH
T ss_pred             EeCCCCCcHHHHHHHc
Confidence            9999999999998754

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.36  E-value=9.4e-13  Score=123.67  Aligned_cols=92  Identities=20%  Similarity=0.260  Sum_probs=80.6

Q ss_pred             cCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVY  344 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  344 (363)
                      ++|...+.||+|+||.||++.. .+++.||+|++...   .....+.+.+|+.++..++|||||++++++.+.+..++||
T Consensus        15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~   94 (384)
T 4fr4_A           15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV   94 (384)
T ss_dssp             GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence            5688899999999999999996 45889999999643   2233567899999999999999999999999999999999


Q ss_pred             EccCCCChhHHhhcCC
Q 017984          345 EFVPNQSLLDNLFDKM  360 (363)
Q Consensus       345 Ey~~~gsL~~~l~~~~  360 (363)
                      ||+++|+|.+++..+.
T Consensus        95 e~~~gg~L~~~l~~~~  110 (384)
T 4fr4_A           95 DLLLGGDLRYHLQQNV  110 (384)
T ss_dssp             CCCTTEEHHHHHHTTC
T ss_pred             ecCCCCcHHHHHHhcC
Confidence            9999999999998654

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.35  E-value=8e-13  Score=123.50  Aligned_cols=92  Identities=28%  Similarity=0.374  Sum_probs=80.4

Q ss_pred             ccCCCcCceecccCceEEEEEEcC------CCCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCee
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLP------GGEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPES  340 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  340 (363)
                      .++|...+.||+|+||.||++.+.      +++.||||+++.. .......+.+|+.++.+++||||+++++++......
T Consensus        70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~  149 (367)
T 3l9p_A           70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR  149 (367)
T ss_dssp             GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence            456888899999999999999842      3668999999754 445566799999999999999999999999999999


Q ss_pred             EEEEEccCCCChhHHhhcC
Q 017984          341 LLVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       341 ~lv~Ey~~~gsL~~~l~~~  359 (363)
                      +|||||+++|+|.++|...
T Consensus       150 ~lv~e~~~~g~L~~~l~~~  168 (367)
T 3l9p_A          150 FILLELMAGGDLKSFLRET  168 (367)
T ss_dssp             EEEEECCTTEEHHHHHHHH
T ss_pred             EEEEEeCCCCCHHHHHHhh
Confidence            9999999999999999754

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.35  E-value=1.3e-12  Score=121.50  Aligned_cols=93  Identities=27%  Similarity=0.328  Sum_probs=79.9

Q ss_pred             hccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC---ChhhHHHHHHHHHHHhcC-CCCCccceeeEEEeCCeeE
Q 017984          267 ATNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN---TTQWVDHFFNEVNLISGI-NHKNLVKLLGCSITGPESL  341 (363)
Q Consensus       267 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~  341 (363)
                      ..++|...+.||+|+||.||++.. .+|+.||||+++..   .....+.+.+|..++..+ +||||+++++++...+.++
T Consensus        21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~  100 (353)
T 3txo_A           21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLF  100 (353)
T ss_dssp             --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred             chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEE
Confidence            346789999999999999999996 46899999999743   223456688999999988 7999999999999999999


Q ss_pred             EEEEccCCCChhHHhhcC
Q 017984          342 LVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       342 lv~Ey~~~gsL~~~l~~~  359 (363)
                      |||||+++|+|.++|...
T Consensus       101 lv~E~~~gg~L~~~l~~~  118 (353)
T 3txo_A          101 FVMEFVNGGDLMFHIQKS  118 (353)
T ss_dssp             EEEECCCSCBHHHHHHHH
T ss_pred             EEEeCCCCCcHHHHHHHc
Confidence            999999999999998754

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.35  E-value=1.3e-12  Score=118.92  Aligned_cols=94  Identities=29%  Similarity=0.371  Sum_probs=81.8

Q ss_pred             hccCCCcCceecccCceEEEEEEc------CCCCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCe
Q 017984          267 ATNYFHESNKLGQGGSGSVYKGTL------PGGEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPE  339 (363)
Q Consensus       267 ~~~~~~~~~~lg~G~~g~Vy~~~~------~~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  339 (363)
                      ..++|...+.||+|+||.||++..      .+++.||||++... .....+.+.+|+.++.+++||||+++++++...+.
T Consensus        21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~  100 (314)
T 2ivs_A           21 PRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGP  100 (314)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred             chhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCc
Confidence            456788899999999999999985      23578999999754 44556789999999999999999999999999999


Q ss_pred             eEEEEEccCCCChhHHhhcCC
Q 017984          340 SLLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       340 ~~lv~Ey~~~gsL~~~l~~~~  360 (363)
                      .++||||+++|+|.+++....
T Consensus       101 ~~lv~e~~~~~~L~~~l~~~~  121 (314)
T 2ivs_A          101 LLLIVEYAKYGSLRGFLRESR  121 (314)
T ss_dssp             CEEEEECCTTCBHHHHHHHTT
T ss_pred             eEEEEeecCCCCHHHHHHHHh
Confidence            999999999999999997643

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.35  E-value=1.3e-12  Score=116.27  Aligned_cols=93  Identities=28%  Similarity=0.396  Sum_probs=76.7

Q ss_pred             ccCCCcCceecccCceEEEEEEcCCCCEEEEEEeccCC----hhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNT----TQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLV  343 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  343 (363)
                      .++|...+.||+|+||.||++... ++.||||++....    ....+.+.+|+.++..++||||+++++++..++..++|
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   84 (271)
T 3dtc_A            6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV   84 (271)
T ss_dssp             TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred             hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence            356888999999999999999975 8899999987532    23356799999999999999999999999999999999


Q ss_pred             EEccCCCChhHHhhcCCC
Q 017984          344 YEFVPNQSLLDNLFDKML  361 (363)
Q Consensus       344 ~Ey~~~gsL~~~l~~~~~  361 (363)
                      |||+++++|.+++...+.
T Consensus        85 ~e~~~~~~L~~~~~~~~~  102 (271)
T 3dtc_A           85 MEFARGGPLNRVLSGKRI  102 (271)
T ss_dssp             EECCTTEEHHHHHTSSCC
T ss_pred             EEcCCCCCHHHHhhcCCC
Confidence            999999999999876554

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.35  E-value=1.4e-12  Score=118.28  Aligned_cols=92  Identities=22%  Similarity=0.290  Sum_probs=78.2

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEc
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      .++|...+.||+|+||.||++.. .+|+.||+|++........+.+.+|+.++.+++||||+++++++...+..++||||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   87 (304)
T 2jam_A            8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL   87 (304)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence            35678889999999999999996 46899999999865444456799999999999999999999999999999999999


Q ss_pred             cCCCChhHHhhcC
Q 017984          347 VPNQSLLDNLFDK  359 (363)
Q Consensus       347 ~~~gsL~~~l~~~  359 (363)
                      +++++|.+++.++
T Consensus        88 ~~~~~L~~~l~~~  100 (304)
T 2jam_A           88 VSGGELFDRILER  100 (304)
T ss_dssp             CCSCBHHHHHHHH
T ss_pred             CCCccHHHHHHHc
Confidence            9999999988653

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.35  E-value=1.2e-12  Score=121.48  Aligned_cols=92  Identities=24%  Similarity=0.294  Sum_probs=80.4

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLV  343 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  343 (363)
                      .++|...+.||+|+||.||++.. .+|+.||+|++...   .....+.+.+|+.++..++||||+++++++.+.+.++||
T Consensus        40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv  119 (350)
T 1rdq_E           40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV  119 (350)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence            35688899999999999999996 46899999999643   123356789999999999999999999999999999999


Q ss_pred             EEccCCCChhHHhhcC
Q 017984          344 YEFVPNQSLLDNLFDK  359 (363)
Q Consensus       344 ~Ey~~~gsL~~~l~~~  359 (363)
                      |||+++|+|.++|.+.
T Consensus       120 ~e~~~gg~L~~~l~~~  135 (350)
T 1rdq_E          120 MEYVAGGEMFSHLRRI  135 (350)
T ss_dssp             EECCTTCBHHHHHHHH
T ss_pred             EcCCCCCcHHHHHHHc
Confidence            9999999999999753

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.35  E-value=1.5e-12  Score=117.78  Aligned_cols=93  Identities=19%  Similarity=0.274  Sum_probs=75.0

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCCh--------------------------hhHHHHHHHHHHHh
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTT--------------------------QWVDHFFNEVNLIS  320 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~--------------------------~~~~~~~~E~~~l~  320 (363)
                      .++|...+.||+|+||.||++.. .+++.||||++.....                          ...+.+.+|+.++.
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~   91 (298)
T 2zv2_A           12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK   91 (298)
T ss_dssp             ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred             ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence            46788999999999999999986 4688999999965321                          11356899999999


Q ss_pred             cCCCCCccceeeEEEe--CCeeEEEEEccCCCChhHHhhcCC
Q 017984          321 GINHKNLVKLLGCSIT--GPESLLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       321 ~l~h~niv~l~~~~~~--~~~~~lv~Ey~~~gsL~~~l~~~~  360 (363)
                      +++||||+++++++..  .+..+|||||+++|+|.+++....
T Consensus        92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~  133 (298)
T 2zv2_A           92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKP  133 (298)
T ss_dssp             TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSSC
T ss_pred             hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcCC
Confidence            9999999999999986  568999999999999988765544

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.35  E-value=2.3e-12  Score=115.52  Aligned_cols=92  Identities=17%  Similarity=0.306  Sum_probs=81.2

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVY  344 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  344 (363)
                      .++|...+.||+|+||.||++.. .+++.||+|++...  .....+.+.+|+.++.+++||||+++++++..++..++||
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   84 (284)
T 3kk8_A            5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF   84 (284)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence            46788999999999999999996 45899999999643  4445677999999999999999999999999999999999


Q ss_pred             EccCCCChhHHhhcC
Q 017984          345 EFVPNQSLLDNLFDK  359 (363)
Q Consensus       345 Ey~~~gsL~~~l~~~  359 (363)
                      ||+++|+|.+++...
T Consensus        85 e~~~~~~l~~~~~~~   99 (284)
T 3kk8_A           85 DLVTGGELFEDIVAR   99 (284)
T ss_dssp             CCCCSCBHHHHHHHH
T ss_pred             ecCCCCCHHHHHHhc
Confidence            999999998887654

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.35  E-value=1.8e-12  Score=120.88  Aligned_cols=91  Identities=16%  Similarity=0.226  Sum_probs=80.1

Q ss_pred             ccCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEc
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      .++|...+.||+|+||.||++... +++.||||++..... ..+.+.+|+.+++.++||||+++++++...+..+|||||
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~   97 (361)
T 3uc3_A           19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY   97 (361)
T ss_dssp             TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence            467889999999999999999964 689999999975432 235688999999999999999999999999999999999


Q ss_pred             cCCCChhHHhhcC
Q 017984          347 VPNQSLLDNLFDK  359 (363)
Q Consensus       347 ~~~gsL~~~l~~~  359 (363)
                      +++|+|.+++...
T Consensus        98 ~~~~~L~~~l~~~  110 (361)
T 3uc3_A           98 ASGGELYERICNA  110 (361)
T ss_dssp             CCSCBHHHHHHHH
T ss_pred             CCCCCHHHHHHhc
Confidence            9999999998653

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.35  E-value=1.1e-12  Score=120.31  Aligned_cols=92  Identities=25%  Similarity=0.291  Sum_probs=77.7

Q ss_pred             ccCCCcCceecccCceEEEEEEcCCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCC----eeEEE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGP----ESLLV  343 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~~lv  343 (363)
                      .++|...+.||+|+||.||++... ++.||||++..... ....+.+|+.++.+++||||+++++++....    .++||
T Consensus        23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv  100 (322)
T 3soc_A           23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDK-QSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLI  100 (322)
T ss_dssp             TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred             hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCch-HHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEE
Confidence            456888999999999999999876 78999999965432 3445677999999999999999999998754    47999


Q ss_pred             EEccCCCChhHHhhcCCC
Q 017984          344 YEFVPNQSLLDNLFDKML  361 (363)
Q Consensus       344 ~Ey~~~gsL~~~l~~~~~  361 (363)
                      |||+++|+|.++|..+..
T Consensus       101 ~e~~~~g~L~~~l~~~~~  118 (322)
T 3soc_A          101 TAFHEKGSLSDFLKANVV  118 (322)
T ss_dssp             EECCTTCBHHHHHHHCCB
T ss_pred             EecCCCCCHHHHHHhcCC
Confidence            999999999999976543

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.35  E-value=1.7e-12  Score=118.65  Aligned_cols=91  Identities=30%  Similarity=0.445  Sum_probs=78.6

Q ss_pred             cCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCccceeeEEEeCC--eeEEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYNT-TQWVDHFFNEVNLISGINHKNLVKLLGCSITGP--ESLLVY  344 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lv~  344 (363)
                      +.|...+.||+|+||.||++... +++.||||++.... ....+.+.+|++++.+++||||+++++++....  ..+|||
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   88 (319)
T 4euu_A            9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM   88 (319)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred             CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence            56788999999999999999974 58999999997532 234567899999999999999999999988755  789999


Q ss_pred             EccCCCChhHHhhcC
Q 017984          345 EFVPNQSLLDNLFDK  359 (363)
Q Consensus       345 Ey~~~gsL~~~l~~~  359 (363)
                      ||+++|+|.+++...
T Consensus        89 e~~~~~~L~~~l~~~  103 (319)
T 4euu_A           89 EFCPCGSLYTVLEEP  103 (319)
T ss_dssp             ECCTTCBHHHHHHSG
T ss_pred             eCCCCCCHHHHHHHh
Confidence            999999999999764

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.35  E-value=1.8e-12  Score=120.61  Aligned_cols=92  Identities=21%  Similarity=0.294  Sum_probs=81.9

Q ss_pred             ccCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYE  345 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  345 (363)
                      .++|...+.||+|+||.||++... +++.||+|++... .....+.+.+|+.++.+++||||+++++++..++..+||||
T Consensus        32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  111 (360)
T 3eqc_A           32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME  111 (360)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred             cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence            356888899999999999999974 6899999999764 44556789999999999999999999999999999999999


Q ss_pred             ccCCCChhHHhhcC
Q 017984          346 FVPNQSLLDNLFDK  359 (363)
Q Consensus       346 y~~~gsL~~~l~~~  359 (363)
                      |+++|+|.+++...
T Consensus       112 ~~~~~~L~~~l~~~  125 (360)
T 3eqc_A          112 HMDGGSLDQVLKKA  125 (360)
T ss_dssp             CCTTCBHHHHHHHH
T ss_pred             CCCCCCHHHHHHHc
Confidence            99999999998754

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.35  E-value=1.3e-12  Score=125.21  Aligned_cols=93  Identities=16%  Similarity=0.254  Sum_probs=79.6

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCC--hhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNT--TQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVY  344 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  344 (363)
                      .++|...+.||+|+||.||++.. .+|+.+|+|++....  ....+.+.+|+.+++.++||||+++++++.+.+..+|||
T Consensus        10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~   89 (444)
T 3soa_A           10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIF   89 (444)
T ss_dssp             HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEE
Confidence            45688899999999999999985 568999999997542  334567999999999999999999999999999999999


Q ss_pred             EccCCCChhHHhhcCC
Q 017984          345 EFVPNQSLLDNLFDKM  360 (363)
Q Consensus       345 Ey~~~gsL~~~l~~~~  360 (363)
                      ||+++|+|.++|..+.
T Consensus        90 E~~~gg~L~~~i~~~~  105 (444)
T 3soa_A           90 DLVTGGELFEDIVARE  105 (444)
T ss_dssp             CCCBCCBHHHHHHHCS
T ss_pred             EeCCCCCHHHHHHHcC
Confidence            9999999999887543

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.34  E-value=2.5e-12  Score=115.30  Aligned_cols=91  Identities=24%  Similarity=0.300  Sum_probs=79.7

Q ss_pred             cCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccCCh------hhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYNTT------QWVDHFFNEVNLISGINHKNLVKLLGCSITGPESL  341 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  341 (363)
                      ++|...+.||+|+||.||++... +++.||+|.+.....      ...+.|.+|+.++.+++||||+++++++......+
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   84 (283)
T 3bhy_A            5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV   84 (283)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence            45788899999999999999974 689999999975321      23677999999999999999999999999999999


Q ss_pred             EEEEccCCCChhHHhhcC
Q 017984          342 LVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       342 lv~Ey~~~gsL~~~l~~~  359 (363)
                      +||||+++++|.+++.++
T Consensus        85 lv~e~~~~~~L~~~l~~~  102 (283)
T 3bhy_A           85 LILELVSGGELFDFLAEK  102 (283)
T ss_dssp             EEEECCCSCBHHHHHHHH
T ss_pred             EEEeecCCCcHHHHHHhc
Confidence            999999999999998653

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.34  E-value=1.9e-12  Score=116.46  Aligned_cols=90  Identities=19%  Similarity=0.289  Sum_probs=79.4

Q ss_pred             cCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEc
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      +.|...+.||+|+||.||++.. .++..+|+|++... .....+.+.+|+.++.+++||||+++++++...+..++||||
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~  101 (285)
T 3is5_A           22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET  101 (285)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence            4578899999999999999996 46889999999753 233467799999999999999999999999999999999999


Q ss_pred             cCCCChhHHhhc
Q 017984          347 VPNQSLLDNLFD  358 (363)
Q Consensus       347 ~~~gsL~~~l~~  358 (363)
                      +++|+|.+++..
T Consensus       102 ~~~~~L~~~l~~  113 (285)
T 3is5_A          102 CEGGELLERIVS  113 (285)
T ss_dssp             CSCCBHHHHHHH
T ss_pred             CCCCcHHHHHHh
Confidence            999999998853

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.34  E-value=2.9e-12  Score=114.76  Aligned_cols=91  Identities=26%  Similarity=0.319  Sum_probs=80.5

Q ss_pred             ccCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccC--ChhhHHHHHHHHHHHhcC-CCCCccceeeEEEeCCeeEEE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYN--TTQWVDHFFNEVNLISGI-NHKNLVKLLGCSITGPESLLV  343 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv  343 (363)
                      .++|...+.||+|+||.||++... +++.||+|++...  ......++.+|+..+..+ +||||+++++++...+..++|
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv   89 (289)
T 1x8b_A           10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ   89 (289)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred             cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence            356788899999999999999974 6899999999753  334456789999999999 899999999999999999999


Q ss_pred             EEccCCCChhHHhhc
Q 017984          344 YEFVPNQSLLDNLFD  358 (363)
Q Consensus       344 ~Ey~~~gsL~~~l~~  358 (363)
                      |||+++|+|.++|..
T Consensus        90 ~e~~~~~~L~~~l~~  104 (289)
T 1x8b_A           90 NEYCNGGSLADAISE  104 (289)
T ss_dssp             EECCTTCBHHHHHHH
T ss_pred             EEecCCCcHHHHHHh
Confidence            999999999999875

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.34  E-value=2e-12  Score=118.32  Aligned_cols=93  Identities=22%  Similarity=0.280  Sum_probs=80.9

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCCh------hhHHHHHHHHHHHhcCCCCCccceeeEEEeCCee
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTT------QWVDHFFNEVNLISGINHKNLVKLLGCSITGPES  340 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  340 (363)
                      .+.|...+.||+|+||.||++.. .+|+.||+|.+.....      ...+.+.+|+.++.+++||||+++++++...+..
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   90 (321)
T 2a2a_A           11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV   90 (321)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence            34578899999999999999996 4689999999975321      1357799999999999999999999999999999


Q ss_pred             EEEEEccCCCChhHHhhcCC
Q 017984          341 LLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       341 ~lv~Ey~~~gsL~~~l~~~~  360 (363)
                      ++||||+++++|.+++..+.
T Consensus        91 ~lv~e~~~~~~L~~~l~~~~  110 (321)
T 2a2a_A           91 VLILELVSGGELFDFLAQKE  110 (321)
T ss_dssp             EEEECCCCSCBHHHHHHTCS
T ss_pred             EEEEEcCCCCcHHHHHHhcC
Confidence            99999999999999997643

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.34  E-value=1.3e-12  Score=125.44  Aligned_cols=93  Identities=31%  Similarity=0.406  Sum_probs=80.7

Q ss_pred             HHHhccCCCcCceecccCceEEEEEEcCCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEE
Q 017984          264 LEKATNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLV  343 (363)
Q Consensus       264 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  343 (363)
                      +....++|...+.||+|+||.||++.+.++..||||+++... ...++|.+|+.+|.+++||||+++++++.. +..+||
T Consensus       179 ~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv  256 (452)
T 1fmk_A          179 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV  256 (452)
T ss_dssp             SBCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEE
T ss_pred             cccChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEE
Confidence            344566788899999999999999998877889999997543 235679999999999999999999999876 678999


Q ss_pred             EEccCCCChhHHhhc
Q 017984          344 YEFVPNQSLLDNLFD  358 (363)
Q Consensus       344 ~Ey~~~gsL~~~l~~  358 (363)
                      |||+++|+|.++|..
T Consensus       257 ~e~~~~gsL~~~l~~  271 (452)
T 1fmk_A          257 TEYMSKGSLLDFLKG  271 (452)
T ss_dssp             ECCCTTCBHHHHHSH
T ss_pred             ehhhcCCCHHHHHHh
Confidence            999999999999974

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.34  E-value=2e-12  Score=117.96  Aligned_cols=93  Identities=26%  Similarity=0.399  Sum_probs=78.9

Q ss_pred             hccCCCcCceecccCceEEEEEEcCCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEE
Q 017984          267 ATNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVY  344 (363)
Q Consensus       267 ~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  344 (363)
                      ..++|...+.||+|+||.||++...+|+.||+|++...  .......+.+|+.++.+++||||+++++++..++..+|||
T Consensus        19 l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   98 (311)
T 3niz_A           19 LMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVF   98 (311)
T ss_dssp             SSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEE
T ss_pred             hHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEE
Confidence            34678889999999999999999888999999999753  2233567899999999999999999999999999999999


Q ss_pred             EccCCCChhHHhhcCC
Q 017984          345 EFVPNQSLLDNLFDKM  360 (363)
Q Consensus       345 Ey~~~gsL~~~l~~~~  360 (363)
                      ||+++ +|.+++..+.
T Consensus        99 e~~~~-~l~~~~~~~~  113 (311)
T 3niz_A           99 EFMEK-DLKKVLDENK  113 (311)
T ss_dssp             ECCSE-EHHHHHHTCT
T ss_pred             cCCCC-CHHHHHHhcc
Confidence            99985 8888876543

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.33  E-value=1.9e-12  Score=117.25  Aligned_cols=92  Identities=22%  Similarity=0.404  Sum_probs=79.3

Q ss_pred             hccCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEE
Q 017984          267 ATNYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYE  345 (363)
Q Consensus       267 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  345 (363)
                      ..+.|...+.||+|+||.||++... +++.||+|++........+.+.+|+.++..++||||+++++++...+..++|||
T Consensus        17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   96 (302)
T 2j7t_A           17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE   96 (302)
T ss_dssp             GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred             CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence            4567888999999999999999974 588999999986655667789999999999999999999999999999999999


Q ss_pred             ccCCCChhHHhhc
Q 017984          346 FVPNQSLLDNLFD  358 (363)
Q Consensus       346 y~~~gsL~~~l~~  358 (363)
                      |+++++|.+++..
T Consensus        97 ~~~~~~l~~~~~~  109 (302)
T 2j7t_A           97 FCPGGAVDAIMLE  109 (302)
T ss_dssp             CCTTEEHHHHHHH
T ss_pred             eCCCCcHHHHHHh
Confidence            9999999998864

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.33  E-value=3.5e-12  Score=116.99  Aligned_cols=90  Identities=28%  Similarity=0.340  Sum_probs=79.7

Q ss_pred             cCCCcCceecccCceEEEEEEc-----CCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEE--eCCeeE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL-----PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSI--TGPESL  341 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~-----~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~~~  341 (363)
                      ++|...+.||+|+||.||++.+     .+++.||||++........+.+.+|+.++.+++||||+++++++.  .....+
T Consensus        23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~  102 (327)
T 3lxl_A           23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR  102 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred             hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence            4677889999999999999983     457899999998777777788999999999999999999999887  456789


Q ss_pred             EEEEccCCCChhHHhhc
Q 017984          342 LVYEFVPNQSLLDNLFD  358 (363)
Q Consensus       342 lv~Ey~~~gsL~~~l~~  358 (363)
                      |||||+++|+|.+++..
T Consensus       103 lv~e~~~~~~L~~~l~~  119 (327)
T 3lxl_A          103 LVMEYLPSGCLRDFLQR  119 (327)
T ss_dssp             EEEECCTTCBHHHHHHH
T ss_pred             EEEeecCCCCHHHHHHh
Confidence            99999999999999875

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.33  E-value=1.7e-12  Score=125.27  Aligned_cols=93  Identities=25%  Similarity=0.317  Sum_probs=81.1

Q ss_pred             ccCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYNT---TQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLV  343 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  343 (363)
                      .++|...+.||+|+||.||++... +|+.||||++....   ......+.+|+.+++.++||||+++++++...+..+||
T Consensus        15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv   94 (476)
T 2y94_A           15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV   94 (476)
T ss_dssp             ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence            356888999999999999999964 69999999996431   22356799999999999999999999999999999999


Q ss_pred             EEccCCCChhHHhhcCC
Q 017984          344 YEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       344 ~Ey~~~gsL~~~l~~~~  360 (363)
                      |||+++|+|.++|.++.
T Consensus        95 ~E~~~gg~L~~~l~~~~  111 (476)
T 2y94_A           95 MEYVSGGELFDYICKNG  111 (476)
T ss_dssp             EECCSSEEHHHHTTSSS
T ss_pred             EeCCCCCcHHHHHHhcC
Confidence            99999999999997653

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.33  E-value=4e-12  Score=115.60  Aligned_cols=92  Identities=23%  Similarity=0.337  Sum_probs=80.1

Q ss_pred             cCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYE  345 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  345 (363)
                      ++|...+.||+|+||.||++... +|+.||+|++...  .....+.+.+|+.++.+++||||+++++++...+..++|||
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (311)
T 4agu_A            3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE   82 (311)
T ss_dssp             CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence            56888999999999999999974 5899999998654  33345678999999999999999999999999999999999


Q ss_pred             ccCCCChhHHhhcCC
Q 017984          346 FVPNQSLLDNLFDKM  360 (363)
Q Consensus       346 y~~~gsL~~~l~~~~  360 (363)
                      |+++++|.+++....
T Consensus        83 ~~~~~~l~~~~~~~~   97 (311)
T 4agu_A           83 YCDHTVLHELDRYQR   97 (311)
T ss_dssp             CCSEEHHHHHHHTSS
T ss_pred             eCCCchHHHHHhhhc
Confidence            999999998876543

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.33  E-value=4.8e-12  Score=114.70  Aligned_cols=94  Identities=22%  Similarity=0.355  Sum_probs=82.3

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYE  345 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  345 (363)
                      .+.|...+.||+|+||.||++.. .+++.||+|++... .....+.+.+|+.++..++||||+++++++......++|||
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  100 (303)
T 3a7i_A           21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME  100 (303)
T ss_dssp             GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence            35578889999999999999985 56899999999754 23456789999999999999999999999999999999999


Q ss_pred             ccCCCChhHHhhcCCC
Q 017984          346 FVPNQSLLDNLFDKML  361 (363)
Q Consensus       346 y~~~gsL~~~l~~~~~  361 (363)
                      |+++++|.+++.....
T Consensus       101 ~~~~~~L~~~~~~~~~  116 (303)
T 3a7i_A          101 YLGGGSALDLLEPGPL  116 (303)
T ss_dssp             CCTTEEHHHHHTTSCC
T ss_pred             eCCCCcHHHHHhcCCC
Confidence            9999999999876543

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.33  E-value=5.7e-12  Score=115.18  Aligned_cols=91  Identities=30%  Similarity=0.412  Sum_probs=78.2

Q ss_pred             CCcCceecccCceEEEEEEc-----CCCCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeC--CeeEE
Q 017984          271 FHESNKLGQGGSGSVYKGTL-----PGGEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITG--PESLL  342 (363)
Q Consensus       271 ~~~~~~lg~G~~g~Vy~~~~-----~~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l  342 (363)
                      |...+.||+|+||.||++.+     .+++.||||++... .....+.|.+|+.++.+++||||+++++++...  ...++
T Consensus        33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l  112 (318)
T 3lxp_A           33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL  112 (318)
T ss_dssp             EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred             HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence            47888999999999999864     25789999999764 345567799999999999999999999999874  67899


Q ss_pred             EEEccCCCChhHHhhcCCC
Q 017984          343 VYEFVPNQSLLDNLFDKML  361 (363)
Q Consensus       343 v~Ey~~~gsL~~~l~~~~~  361 (363)
                      ||||+++|+|.+++.+...
T Consensus       113 v~e~~~~~~L~~~l~~~~~  131 (318)
T 3lxp_A          113 VMEYVPLGSLRDYLPRHSI  131 (318)
T ss_dssp             EECCCTTCBHHHHGGGSCC
T ss_pred             EEecccCCcHHHHHhhCCC
Confidence            9999999999999987653

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.33  E-value=3.8e-12  Score=123.99  Aligned_cols=93  Identities=23%  Similarity=0.398  Sum_probs=78.3

Q ss_pred             hccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCCh-------------hhHHHHHHHHHHHhcCCCCCccceee
Q 017984          267 ATNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTT-------------QWVDHFFNEVNLISGINHKNLVKLLG  332 (363)
Q Consensus       267 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-------------~~~~~~~~E~~~l~~l~h~niv~l~~  332 (363)
                      ..+.|...++||+|+||.||++.. .+++.||+|++.....             ...+.+.+|+.++.+++||||+++++
T Consensus        34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~  113 (504)
T 3q5i_A           34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD  113 (504)
T ss_dssp             GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred             cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence            456788999999999999999996 4588999999975321             23567999999999999999999999


Q ss_pred             EEEeCCeeEEEEEccCCCChhHHhhcC
Q 017984          333 CSITGPESLLVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       333 ~~~~~~~~~lv~Ey~~~gsL~~~l~~~  359 (363)
                      ++......+|||||+++|+|.+++...
T Consensus       114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~  140 (504)
T 3q5i_A          114 VFEDKKYFYLVTEFYEGGELFEQIINR  140 (504)
T ss_dssp             EEECSSEEEEEEECCTTCBHHHHHHHH
T ss_pred             EEEcCCEEEEEEecCCCCcHHHHHHHc
Confidence            999999999999999999999988654

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.33  E-value=2e-12  Score=121.41  Aligned_cols=94  Identities=23%  Similarity=0.336  Sum_probs=81.2

Q ss_pred             hccCCCcCceecccCceEEEEEEc--------CCCCEEEEEEeccC-ChhhHHHHHHHHHHHhcC-CCCCccceeeEEEe
Q 017984          267 ATNYFHESNKLGQGGSGSVYKGTL--------PGGEAVAVKRLFYN-TTQWVDHFFNEVNLISGI-NHKNLVKLLGCSIT  336 (363)
Q Consensus       267 ~~~~~~~~~~lg~G~~g~Vy~~~~--------~~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~  336 (363)
                      ..++|...+.||+|+||.||++..        ..+..||||++... .....+.+.+|++++.++ +||||+++++++..
T Consensus        67 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~  146 (382)
T 3tt0_A           67 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ  146 (382)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             chhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeecc
Confidence            456788899999999999999984        12357999999764 444567899999999999 89999999999999


Q ss_pred             CCeeEEEEEccCCCChhHHhhcCC
Q 017984          337 GPESLLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       337 ~~~~~lv~Ey~~~gsL~~~l~~~~  360 (363)
                      ++..+|||||+++|+|.++|....
T Consensus       147 ~~~~~lv~e~~~~g~L~~~l~~~~  170 (382)
T 3tt0_A          147 DGPLYVIVEYASKGNLREYLQARR  170 (382)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHHTC
T ss_pred             CCceEEEEEecCCCcHHHHHHHhc
Confidence            999999999999999999997654

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.33  E-value=2.3e-12  Score=118.62  Aligned_cols=94  Identities=23%  Similarity=0.347  Sum_probs=80.8

Q ss_pred             hccCCCcCceecccCceEEEEEEc--------CCCCEEEEEEeccC-ChhhHHHHHHHHHHHhcC-CCCCccceeeEEEe
Q 017984          267 ATNYFHESNKLGQGGSGSVYKGTL--------PGGEAVAVKRLFYN-TTQWVDHFFNEVNLISGI-NHKNLVKLLGCSIT  336 (363)
Q Consensus       267 ~~~~~~~~~~lg~G~~g~Vy~~~~--------~~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~  336 (363)
                      ..++|...+.||+|+||.||++..        .++..||||++... .....+.+.+|+.++.++ +||||+++++++..
T Consensus        33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~  112 (334)
T 2pvf_A           33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ  112 (334)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             CHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence            456788999999999999999985        24678999999754 344567799999999999 89999999999999


Q ss_pred             CCeeEEEEEccCCCChhHHhhcCC
Q 017984          337 GPESLLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       337 ~~~~~lv~Ey~~~gsL~~~l~~~~  360 (363)
                      .+..++||||+++|+|.++|....
T Consensus       113 ~~~~~lv~e~~~~~~L~~~l~~~~  136 (334)
T 2pvf_A          113 DGPLYVIVEYASKGNLREYLRARR  136 (334)
T ss_dssp             SSCCEEEEECCTTCBHHHHHHTTS
T ss_pred             CCceEEEEECCCCCcHHHHHHHhc
Confidence            999999999999999999998654

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.33  E-value=8.3e-13  Score=118.73  Aligned_cols=93  Identities=34%  Similarity=0.472  Sum_probs=81.8

Q ss_pred             HhccCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEE
Q 017984          266 KATNYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVY  344 (363)
Q Consensus       266 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  344 (363)
                      ...++|...+.||+|+||.||++... ++..||+|.+.... ...+.|.+|+.++.+++||||+++++++...+..++||
T Consensus        10 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   88 (288)
T 3kfa_A           10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT   88 (288)
T ss_dssp             CCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEE
T ss_pred             ccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEE
Confidence            34567888999999999999999974 48899999997543 34567999999999999999999999999999999999


Q ss_pred             EccCCCChhHHhhcC
Q 017984          345 EFVPNQSLLDNLFDK  359 (363)
Q Consensus       345 Ey~~~gsL~~~l~~~  359 (363)
                      ||+++|+|.+++...
T Consensus        89 e~~~~~~L~~~~~~~  103 (288)
T 3kfa_A           89 EFMTYGNLLDYLREC  103 (288)
T ss_dssp             ECCTTEEHHHHHHHC
T ss_pred             EcCCCCcHHHHHHhc
Confidence            999999999999753

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.32  E-value=3.1e-12  Score=114.22  Aligned_cols=92  Identities=25%  Similarity=0.332  Sum_probs=80.5

Q ss_pred             ccCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLV  343 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  343 (363)
                      .++|...+.||+|+||.||++... +|+.||||++...   .....+.+.+|+.++..++||||+++++++...+..++|
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   89 (276)
T 2h6d_A           10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV   89 (276)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence            457888999999999999999974 6899999999643   223356799999999999999999999999999999999


Q ss_pred             EEccCCCChhHHhhcC
Q 017984          344 YEFVPNQSLLDNLFDK  359 (363)
Q Consensus       344 ~Ey~~~gsL~~~l~~~  359 (363)
                      |||+++++|.+++..+
T Consensus        90 ~e~~~~~~L~~~l~~~  105 (276)
T 2h6d_A           90 MEYVSGGELFDYICKH  105 (276)
T ss_dssp             EECCCSCBHHHHHHHH
T ss_pred             EeccCCCcHHHHHhcc
Confidence            9999999999998654

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.32  E-value=1.8e-12  Score=117.96  Aligned_cols=95  Identities=29%  Similarity=0.360  Sum_probs=82.2

Q ss_pred             HhccCCCcCceecccCceEEEEEEc------CCCCEEEEEEeccC-ChhhHHHHHHHHHHHhcC-CCCCccceeeEEEeC
Q 017984          266 KATNYFHESNKLGQGGSGSVYKGTL------PGGEAVAVKRLFYN-TTQWVDHFFNEVNLISGI-NHKNLVKLLGCSITG  337 (363)
Q Consensus       266 ~~~~~~~~~~~lg~G~~g~Vy~~~~------~~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~  337 (363)
                      ...++|...+.||+|+||.||++..      .+++.||||++... .....+.+.+|+.++.++ +||||+++++++..+
T Consensus        20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~   99 (313)
T 1t46_A           20 FPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIG   99 (313)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             cChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecC
Confidence            3456788899999999999999984      34679999999754 334567799999999999 899999999999999


Q ss_pred             CeeEEEEEccCCCChhHHhhcCC
Q 017984          338 PESLLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       338 ~~~~lv~Ey~~~gsL~~~l~~~~  360 (363)
                      +..++||||+++|+|.++|....
T Consensus       100 ~~~~lv~e~~~~~~L~~~l~~~~  122 (313)
T 1t46_A          100 GPTLVITEYCCYGDLLNFLRRKR  122 (313)
T ss_dssp             SSCEEEEECCTTEEHHHHHHHTT
T ss_pred             CCcEEEEecCCCCCHHHHHHhcc
Confidence            99999999999999999997653

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.32  E-value=1e-12  Score=119.84  Aligned_cols=92  Identities=22%  Similarity=0.266  Sum_probs=78.6

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCC----e
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGP----E  339 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~  339 (363)
                      .++|...+.||+|+||.||++.. .+++.||||++...   .......|.+|+.++.+++||||+++++++....    .
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~   90 (311)
T 3ork_A           11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL   90 (311)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred             cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence            46788999999999999999995 56899999999754   3344567999999999999999999999987654    3


Q ss_pred             eEEEEEccCCCChhHHhhcC
Q 017984          340 SLLVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       340 ~~lv~Ey~~~gsL~~~l~~~  359 (363)
                      .+|||||+++|+|.+++..+
T Consensus        91 ~~lv~e~~~g~~L~~~l~~~  110 (311)
T 3ork_A           91 PYIVMEYVDGVTLRDIVHTE  110 (311)
T ss_dssp             EEEEEECCCEEEHHHHHHHH
T ss_pred             cEEEEecCCCCCHHHHHHhc
Confidence            49999999999999998754

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.32  E-value=1.6e-12  Score=127.60  Aligned_cols=95  Identities=31%  Similarity=0.409  Sum_probs=81.6

Q ss_pred             HHHHHhccCCCcCceecccCceEEEEEEcCCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeE
Q 017984          262 ETLEKATNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESL  341 (363)
Q Consensus       262 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  341 (363)
                      ..++...++|...+.||+|+||.||++.+.++..||||+++... ...++|.+|+.+|.+++||||+++++++.. +..+
T Consensus       260 ~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~  337 (535)
T 2h8h_A          260 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIY  337 (535)
T ss_dssp             TCSBCCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCE
T ss_pred             cceecchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccce
Confidence            33444566788899999999999999999877889999997643 235679999999999999999999999866 6789


Q ss_pred             EEEEccCCCChhHHhhc
Q 017984          342 LVYEFVPNQSLLDNLFD  358 (363)
Q Consensus       342 lv~Ey~~~gsL~~~l~~  358 (363)
                      |||||+++|+|.++|..
T Consensus       338 lv~e~~~~gsL~~~l~~  354 (535)
T 2h8h_A          338 IVTEYMSKGSLLDFLKG  354 (535)
T ss_dssp             EEECCCTTEEHHHHHSH
T ss_pred             EeeehhcCCcHHHHHhh
Confidence            99999999999999974

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.32  E-value=1.6e-12  Score=120.44  Aligned_cols=93  Identities=19%  Similarity=0.232  Sum_probs=79.5

Q ss_pred             HhccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCC---hhhHHHHHHHHHHHhcC-CCCCccceeeEEEeCCee
Q 017984          266 KATNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNT---TQWVDHFFNEVNLISGI-NHKNLVKLLGCSITGPES  340 (363)
Q Consensus       266 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~  340 (363)
                      ...++|...+.||+|+||.||++.. .+|+.||||+++...   ....+.+..|..++..+ +||||+++++++.+.+.+
T Consensus        14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~   93 (345)
T 1xjd_A           14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL   93 (345)
T ss_dssp             --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred             CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence            4567899999999999999999997 468899999997531   23355688999999876 899999999999999999


Q ss_pred             EEEEEccCCCChhHHhhc
Q 017984          341 LLVYEFVPNQSLLDNLFD  358 (363)
Q Consensus       341 ~lv~Ey~~~gsL~~~l~~  358 (363)
                      +|||||+++|+|.++|..
T Consensus        94 ~lv~E~~~gg~L~~~l~~  111 (345)
T 1xjd_A           94 FFVMEYLNGGDLMYHIQS  111 (345)
T ss_dssp             EEEEECCTTCBHHHHHHH
T ss_pred             EEEEeCCCCCcHHHHHHH
Confidence            999999999999999875

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.32  E-value=1.4e-12  Score=122.94  Aligned_cols=93  Identities=20%  Similarity=0.231  Sum_probs=78.1

Q ss_pred             ccCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccC---ChhhHHHHHHHHHHHhcC-CCCCccceeeEEEeCCeeEE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYN---TTQWVDHFFNEVNLISGI-NHKNLVKLLGCSITGPESLL  342 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l  342 (363)
                      .++|...++||+|+||.||++... +++.||+|+++..   .....+.+.+|..++.++ +||||+++++++.+.+.++|
T Consensus        51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l  130 (396)
T 4dc2_A           51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF  130 (396)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence            456888999999999999999964 5889999999753   223344588999999877 89999999999999999999


Q ss_pred             EEEccCCCChhHHhhcCC
Q 017984          343 VYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       343 v~Ey~~~gsL~~~l~~~~  360 (363)
                      ||||+++|+|.++|....
T Consensus       131 V~E~~~gg~L~~~l~~~~  148 (396)
T 4dc2_A          131 VIEYVNGGDLMFHMQRQR  148 (396)
T ss_dssp             EEECCTTCBHHHHHHHHS
T ss_pred             EEEcCCCCcHHHHHHHcC
Confidence            999999999999987543

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.32  E-value=2.5e-12  Score=117.28  Aligned_cols=92  Identities=22%  Similarity=0.282  Sum_probs=79.3

Q ss_pred             hccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEe----CCeeE
Q 017984          267 ATNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSIT----GPESL  341 (363)
Q Consensus       267 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~  341 (363)
                      ..++|...+.||+|+||.||++.. .+++.||||++........+.+.+|+.++..++||||+++++++..    ....+
T Consensus        27 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~  106 (317)
T 2buj_A           27 DNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAW  106 (317)
T ss_dssp             TTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEE
T ss_pred             CCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeE
Confidence            356788999999999999999996 5689999999987666677889999999999999999999999873    34789


Q ss_pred             EEEEccCCCChhHHhhc
Q 017984          342 LVYEFVPNQSLLDNLFD  358 (363)
Q Consensus       342 lv~Ey~~~gsL~~~l~~  358 (363)
                      +||||+++|+|.+++..
T Consensus       107 lv~e~~~~~~L~~~l~~  123 (317)
T 2buj_A          107 LLLPFFKRGTLWNEIER  123 (317)
T ss_dssp             EEEECCTTCBHHHHHHH
T ss_pred             EEEEeCCCCcHHHHHHH
Confidence            99999999999999875

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.32  E-value=3.7e-12  Score=113.67  Aligned_cols=92  Identities=25%  Similarity=0.329  Sum_probs=80.9

Q ss_pred             ccCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYE  345 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  345 (363)
                      .++|...+.||+|+||.||++... +++.||+|++... .....+.+.+|+.++..++||||+++++++..++..++|||
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   85 (276)
T 2yex_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE   85 (276)
T ss_dssp             HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence            356788899999999999999964 6899999999743 33445779999999999999999999999999999999999


Q ss_pred             ccCCCChhHHhhcC
Q 017984          346 FVPNQSLLDNLFDK  359 (363)
Q Consensus       346 y~~~gsL~~~l~~~  359 (363)
                      |+++++|.+++..+
T Consensus        86 ~~~~~~L~~~l~~~   99 (276)
T 2yex_A           86 YCSGGELFDRIEPD   99 (276)
T ss_dssp             CCTTEEGGGGSBTT
T ss_pred             ecCCCcHHHHHhhc
Confidence            99999999998754

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.32  E-value=2.1e-12  Score=117.67  Aligned_cols=104  Identities=25%  Similarity=0.302  Sum_probs=87.1

Q ss_pred             cccchHHHHHhccCCCcCceecccCceEEEEEEc------CCCCEEEEEEeccC-ChhhHHHHHHHHHHHhcC-CCCCcc
Q 017984          257 LNFSYETLEKATNYFHESNKLGQGGSGSVYKGTL------PGGEAVAVKRLFYN-TTQWVDHFFNEVNLISGI-NHKNLV  328 (363)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~------~~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l-~h~niv  328 (363)
                      ..+....+....++|...+.||+|+||.||++..      .+++.||||++... .....+.+.+|+.++.++ +||||+
T Consensus        15 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv   94 (316)
T 2xir_A           15 LPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV   94 (316)
T ss_dssp             SCCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred             ccccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCee
Confidence            3456666777788999999999999999999973      34679999999764 334456799999999999 799999


Q ss_pred             ceeeEEEeCC-eeEEEEEccCCCChhHHhhcCC
Q 017984          329 KLLGCSITGP-ESLLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       329 ~l~~~~~~~~-~~~lv~Ey~~~gsL~~~l~~~~  360 (363)
                      ++++++...+ ..++||||+++|+|.++|....
T Consensus        95 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~  127 (316)
T 2xir_A           95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKR  127 (316)
T ss_dssp             CEEEEECCTTSCCEEEEECCTTEEHHHHHHTCT
T ss_pred             eEEEEEecCCCceEEEEEcCCCCcHHHHHHhcc
Confidence            9999987754 5899999999999999998654

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.32  E-value=3.5e-12  Score=117.01  Aligned_cols=93  Identities=30%  Similarity=0.431  Sum_probs=79.8

Q ss_pred             ccCCCcCceecccCceEEEEEEc-----CCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCC--ee
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-----PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGP--ES  340 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~  340 (363)
                      .++|...+.||+|+||.||++.+     .+++.||||++........+.|.+|+.++.+++||||+++++++...+  ..
T Consensus        40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~  119 (326)
T 2w1i_A           40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL  119 (326)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred             HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence            34577889999999999999983     358899999998776666778999999999999999999999886643  78


Q ss_pred             EEEEEccCCCChhHHhhcCC
Q 017984          341 LLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       341 ~lv~Ey~~~gsL~~~l~~~~  360 (363)
                      ++||||+++|+|.++|....
T Consensus       120 ~lv~e~~~~~~L~~~l~~~~  139 (326)
T 2w1i_A          120 KLIMEYLPYGSLRDYLQKHK  139 (326)
T ss_dssp             EEEECCCTTCBHHHHHHHST
T ss_pred             EEEEECCCCCCHHHHHHhcc
Confidence            99999999999999997653

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.32  E-value=7.8e-13  Score=120.94  Aligned_cols=100  Identities=27%  Similarity=0.391  Sum_probs=85.6

Q ss_pred             cchHHHHHhccCCCcCceecccCceEEEEEEcC------CCCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCcccee
Q 017984          259 FSYETLEKATNYFHESNKLGQGGSGSVYKGTLP------GGEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLL  331 (363)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~  331 (363)
                      +..+++....++|...+.||+|+||.||++...      +++.||+|.+... .......|.+|+.++.+++||||++++
T Consensus        15 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~   94 (322)
T 1p4o_A           15 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLL   94 (322)
T ss_dssp             CCCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEE
T ss_pred             cChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeE
Confidence            344555666788999999999999999999753      3678999999754 334556799999999999999999999


Q ss_pred             eEEEeCCeeEEEEEccCCCChhHHhhc
Q 017984          332 GCSITGPESLLVYEFVPNQSLLDNLFD  358 (363)
Q Consensus       332 ~~~~~~~~~~lv~Ey~~~gsL~~~l~~  358 (363)
                      +++...+..++||||+++|+|.++|..
T Consensus        95 ~~~~~~~~~~lv~e~~~~~~L~~~l~~  121 (322)
T 1p4o_A           95 GVVSQGQPTLVIMELMTRGDLKSYLRS  121 (322)
T ss_dssp             EEECSSSSCEEEEECCTTCBHHHHHHH
T ss_pred             EEEccCCccEEEEEeCCCCcHHHHHHH
Confidence            999999999999999999999999874

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.31  E-value=4.6e-12  Score=114.41  Aligned_cols=93  Identities=23%  Similarity=0.323  Sum_probs=80.4

Q ss_pred             hccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCC---------hhhHHHHHHHHHHHhcCC-CCCccceeeEEE
Q 017984          267 ATNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNT---------TQWVDHFFNEVNLISGIN-HKNLVKLLGCSI  335 (363)
Q Consensus       267 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~---------~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~  335 (363)
                      ..++|...+.||+|+||.||++.. .+|+.||||++....         ....+.+.+|+.++.++. ||||+++++++.
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~   94 (298)
T 1phk_A           15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE   94 (298)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred             hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence            346788999999999999999997 468899999997542         122456899999999995 999999999999


Q ss_pred             eCCeeEEEEEccCCCChhHHhhcC
Q 017984          336 TGPESLLVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       336 ~~~~~~lv~Ey~~~gsL~~~l~~~  359 (363)
                      ..+..+|||||+++++|.+++.++
T Consensus        95 ~~~~~~lv~e~~~~~~L~~~l~~~  118 (298)
T 1phk_A           95 TNTFFFLVFDLMKKGELFDYLTEK  118 (298)
T ss_dssp             CSSEEEEEEECCTTCBHHHHHHHH
T ss_pred             cCCeEEEEEeccCCCcHHHHHhcc
Confidence            999999999999999999998754

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.31  E-value=4.9e-12  Score=114.09  Aligned_cols=92  Identities=17%  Similarity=0.207  Sum_probs=80.5

Q ss_pred             ccCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLV  343 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  343 (363)
                      .++|...+.||+|+||.||++... +++.+|+|++...   .....+.+.+|+.+++.++||||+++++++...+..++|
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv   93 (294)
T 2rku_A           14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV   93 (294)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence            356788899999999999999974 5889999998643   344567799999999999999999999999999999999


Q ss_pred             EEccCCCChhHHhhcC
Q 017984          344 YEFVPNQSLLDNLFDK  359 (363)
Q Consensus       344 ~Ey~~~gsL~~~l~~~  359 (363)
                      |||+++++|.+++...
T Consensus        94 ~e~~~~~~L~~~~~~~  109 (294)
T 2rku_A           94 LELCRRRSLLELHKRR  109 (294)
T ss_dssp             EECCTTCBHHHHHHHH
T ss_pred             EecCCCCCHHHHHHhc
Confidence            9999999999988653

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.31  E-value=1.1e-12  Score=120.67  Aligned_cols=96  Identities=28%  Similarity=0.336  Sum_probs=82.4

Q ss_pred             HHHHhccCCCcCceecccCceEEEEEEcC-C-----CCEEEEEEeccC-ChhhHHHHHHHHHHHhcC-CCCCccceeeEE
Q 017984          263 TLEKATNYFHESNKLGQGGSGSVYKGTLP-G-----GEAVAVKRLFYN-TTQWVDHFFNEVNLISGI-NHKNLVKLLGCS  334 (363)
Q Consensus       263 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~-----g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~  334 (363)
                      .+....++|...+.||+|+||.||++... +     ...||+|.+... .....+.+.+|+.++..+ +||||+++++++
T Consensus        40 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~  119 (333)
T 2i1m_A           40 KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGAC  119 (333)
T ss_dssp             GGBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence            34455678899999999999999999853 2     248999999764 344567799999999999 899999999999


Q ss_pred             EeCCeeEEEEEccCCCChhHHhhc
Q 017984          335 ITGPESLLVYEFVPNQSLLDNLFD  358 (363)
Q Consensus       335 ~~~~~~~lv~Ey~~~gsL~~~l~~  358 (363)
                      ...+..+|||||+++|+|.++|..
T Consensus       120 ~~~~~~~lv~e~~~~g~L~~~l~~  143 (333)
T 2i1m_A          120 THGGPVLVITEYCCYGDLLNFLRR  143 (333)
T ss_dssp             CSSSSCEEEEECCTTEEHHHHHHH
T ss_pred             ecCCceEEEEecCCCCcHHHHHHH
Confidence            999999999999999999999864

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.31  E-value=6.9e-12  Score=114.01  Aligned_cols=91  Identities=23%  Similarity=0.335  Sum_probs=78.9

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLV  343 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  343 (363)
                      .++|...+.||+|+||.||++.. .+|+.||+|++...   .......+.+|+.++.+++||||+++++++...+..++|
T Consensus        31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv  110 (310)
T 2wqm_A           31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV  110 (310)
T ss_dssp             GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence            35688899999999999999996 56899999999752   345567799999999999999999999999999999999


Q ss_pred             EEccCCCChhHHhhc
Q 017984          344 YEFVPNQSLLDNLFD  358 (363)
Q Consensus       344 ~Ey~~~gsL~~~l~~  358 (363)
                      |||+++|+|.+++..
T Consensus       111 ~e~~~~~~L~~~l~~  125 (310)
T 2wqm_A          111 LELADAGDLSRMIKH  125 (310)
T ss_dssp             EECCCSCBHHHHHHH
T ss_pred             EecCCCCCHHHHHHH
Confidence            999999999998863

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.31  E-value=4e-12  Score=115.04  Aligned_cols=91  Identities=27%  Similarity=0.406  Sum_probs=75.5

Q ss_pred             cCCCcCceecccCceEEEEEEc-----CCCCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeC--Cee
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL-----PGGEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITG--PES  340 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~-----~~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~  340 (363)
                      ..|...+.||+|+||.||++.+     .+++.||+|++... .....+.+.+|+.++.+++||||+++++++...  ...
T Consensus        21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~  100 (302)
T 4e5w_A           21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI  100 (302)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred             hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence            4477888999999999999983     35889999999754 334457799999999999999999999999876  678


Q ss_pred             EEEEEccCCCChhHHhhcC
Q 017984          341 LLVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       341 ~lv~Ey~~~gsL~~~l~~~  359 (363)
                      ++||||+++|+|.+++..+
T Consensus       101 ~lv~e~~~~~~L~~~l~~~  119 (302)
T 4e5w_A          101 KLIMEFLPSGSLKEYLPKN  119 (302)
T ss_dssp             EEEEECCTTCBHHHHHHHH
T ss_pred             EEEEEeCCCCcHHHHHHhc
Confidence            9999999999999999543

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.31  E-value=4.2e-12  Score=115.61  Aligned_cols=92  Identities=14%  Similarity=0.179  Sum_probs=81.1

Q ss_pred             ccCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLV  343 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  343 (363)
                      .++|...+.||+|+||.||++... +++.||+|++...   .....+.+.+|+.++.+++||||+++++++..++..++|
T Consensus        33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv  112 (309)
T 2h34_A           33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD  112 (309)
T ss_dssp             -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence            467899999999999999999964 6889999999753   333457799999999999999999999999999999999


Q ss_pred             EEccCCCChhHHhhcC
Q 017984          344 YEFVPNQSLLDNLFDK  359 (363)
Q Consensus       344 ~Ey~~~gsL~~~l~~~  359 (363)
                      |||+++++|.+++.++
T Consensus       113 ~e~~~~~~L~~~l~~~  128 (309)
T 2h34_A          113 MRLINGVDLAAMLRRQ  128 (309)
T ss_dssp             EECCCCEEHHHHHHHH
T ss_pred             EEecCCCCHHHHHHhc
Confidence            9999999999998754

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.31  E-value=3.4e-12  Score=121.40  Aligned_cols=94  Identities=17%  Similarity=0.242  Sum_probs=77.1

Q ss_pred             HhccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCC--------hhhHHHHHHHHHHHhcCCCCCccceeeEEEe
Q 017984          266 KATNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNT--------TQWVDHFFNEVNLISGINHKNLVKLLGCSIT  336 (363)
Q Consensus       266 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~--------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~  336 (363)
                      ...++|...+.||+|+||.||++.. .+++.||||++....        ......+.+|+.+|.+++||||+++++++. 
T Consensus       132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-  210 (419)
T 3i6u_A          132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-  210 (419)
T ss_dssp             HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-
T ss_pred             hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-
Confidence            3457899999999999999999986 458999999996421        112235889999999999999999999875 


Q ss_pred             CCeeEEEEEccCCCChhHHhhcCC
Q 017984          337 GPESLLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       337 ~~~~~lv~Ey~~~gsL~~~l~~~~  360 (363)
                      .+..+|||||+++|+|.+++..+.
T Consensus       211 ~~~~~lv~e~~~~g~L~~~l~~~~  234 (419)
T 3i6u_A          211 AEDYYIVLELMEGGELFDKVVGNK  234 (419)
T ss_dssp             SSEEEEEEECCTTCBGGGGTSSSC
T ss_pred             cCceEEEEEcCCCCcHHHHHhccC
Confidence            456899999999999999987654

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.31  E-value=1.9e-12  Score=119.55  Aligned_cols=97  Identities=26%  Similarity=0.344  Sum_probs=80.9

Q ss_pred             HHHhccCCCcCceecccCceEEEEEEc------CCCCEEEEEEeccC-ChhhHHHHHHHHHHHhcC-CCCCccceeeEEE
Q 017984          264 LEKATNYFHESNKLGQGGSGSVYKGTL------PGGEAVAVKRLFYN-TTQWVDHFFNEVNLISGI-NHKNLVKLLGCSI  335 (363)
Q Consensus       264 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~------~~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~  335 (363)
                      +....++|...+.||+|+||.||++..      .++..||||++... .....+.+.+|+.++.++ +||||+++++++.
T Consensus        40 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~  119 (344)
T 1rjb_A           40 WEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACT  119 (344)
T ss_dssp             GBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             cccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe
Confidence            344567888999999999999999985      23568999999754 233456799999999999 8999999999999


Q ss_pred             eCCeeEEEEEccCCCChhHHhhcCC
Q 017984          336 TGPESLLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       336 ~~~~~~lv~Ey~~~gsL~~~l~~~~  360 (363)
                      ..+..+|||||+++|+|.++|....
T Consensus       120 ~~~~~~lv~e~~~~g~L~~~l~~~~  144 (344)
T 1rjb_A          120 LSGPIYLIFEYCCYGDLLNYLRSKR  144 (344)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHTTT
T ss_pred             eCCccEEEEecCCCCcHHHHHhhcc
Confidence            9999999999999999999998653

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.31  E-value=3.2e-12  Score=114.30  Aligned_cols=92  Identities=24%  Similarity=0.308  Sum_probs=80.4

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNT---TQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLV  343 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  343 (363)
                      .++|...+.||+|+||.||++.. .+|+.||+|++....   ....+.+.+|+.++.+++||||+++++++...+..++|
T Consensus        10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   89 (278)
T 3cok_A           10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV   89 (278)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred             cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence            35688899999999999999996 568999999996431   22346799999999999999999999999999999999


Q ss_pred             EEccCCCChhHHhhcC
Q 017984          344 YEFVPNQSLLDNLFDK  359 (363)
Q Consensus       344 ~Ey~~~gsL~~~l~~~  359 (363)
                      |||+++++|.+++...
T Consensus        90 ~e~~~~~~L~~~l~~~  105 (278)
T 3cok_A           90 LEMCHNGEMNRYLKNR  105 (278)
T ss_dssp             EECCTTEEHHHHHHTC
T ss_pred             EecCCCCcHHHHHhhc
Confidence            9999999999999764

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.31  E-value=5e-12  Score=116.50  Aligned_cols=92  Identities=17%  Similarity=0.207  Sum_probs=80.6

Q ss_pred             ccCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLV  343 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  343 (363)
                      .++|...+.||+|+||.||++... +++.+|+|++...   .....+.+.+|+.++..++||||+++++++...+..++|
T Consensus        40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  119 (335)
T 2owb_A           40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV  119 (335)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence            456788899999999999999974 5889999998643   345567799999999999999999999999999999999


Q ss_pred             EEccCCCChhHHhhcC
Q 017984          344 YEFVPNQSLLDNLFDK  359 (363)
Q Consensus       344 ~Ey~~~gsL~~~l~~~  359 (363)
                      |||+++++|.+++...
T Consensus       120 ~e~~~~~~L~~~~~~~  135 (335)
T 2owb_A          120 LELCRRRSLLELHKRR  135 (335)
T ss_dssp             ECCCTTCBHHHHHHHH
T ss_pred             EecCCCCCHHHHHhcc
Confidence            9999999999988653

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.30  E-value=3.4e-12  Score=114.95  Aligned_cols=90  Identities=27%  Similarity=0.381  Sum_probs=78.4

Q ss_pred             cCCCcCceecccCceEEEEEEcCCCCEEEEEEeccCCh--hhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEc
Q 017984          269 NYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTT--QWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      ++|...+.||+|+||.||++...+|+.||+|++.....  ...+.+.+|+.++.+++||||+++++++...+..++||||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence            46788899999999999999987799999999975422  2246789999999999999999999999999999999999


Q ss_pred             cCCCChhHHhhcC
Q 017984          347 VPNQSLLDNLFDK  359 (363)
Q Consensus       347 ~~~gsL~~~l~~~  359 (363)
                      +++ +|.+++...
T Consensus        82 ~~~-~l~~~~~~~   93 (288)
T 1ob3_A           82 LDQ-DLKKLLDVC   93 (288)
T ss_dssp             CSE-EHHHHHHTS
T ss_pred             cCC-CHHHHHHhc
Confidence            986 999888653

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.30  E-value=2.6e-12  Score=115.06  Aligned_cols=92  Identities=24%  Similarity=0.342  Sum_probs=79.5

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLV  343 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  343 (363)
                      .++|...+.||+|+||.||++.. .+++.||+|++...   .......+.+|+.++.+++||||+++++++...+..++|
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   87 (279)
T 3fdn_A            8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI   87 (279)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence            46688899999999999999986 45789999998643   122346789999999999999999999999999999999


Q ss_pred             EEccCCCChhHHhhcC
Q 017984          344 YEFVPNQSLLDNLFDK  359 (363)
Q Consensus       344 ~Ey~~~gsL~~~l~~~  359 (363)
                      |||+++|+|.+++...
T Consensus        88 ~e~~~~~~l~~~l~~~  103 (279)
T 3fdn_A           88 LEYAPLGTVYRELQKL  103 (279)
T ss_dssp             ECCCTTEEHHHHHHHH
T ss_pred             EecCCCCcHHHHHHhc
Confidence            9999999999988653

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.30  E-value=3e-12  Score=124.40  Aligned_cols=92  Identities=22%  Similarity=0.298  Sum_probs=76.1

Q ss_pred             ccCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccCC--hhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYNT--TQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVY  344 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  344 (363)
                      .+.|...+.||+|+||.||++... ++..||+|++....  ......+.+|+.++..++||||+++++++......+|||
T Consensus        36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  115 (494)
T 3lij_A           36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM  115 (494)
T ss_dssp             HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            345888999999999999999964 68899999997542  233567999999999999999999999999999999999


Q ss_pred             EccCCCChhHHhhcC
Q 017984          345 EFVPNQSLLDNLFDK  359 (363)
Q Consensus       345 Ey~~~gsL~~~l~~~  359 (363)
                      ||+++|+|.+++...
T Consensus       116 e~~~~g~L~~~~~~~  130 (494)
T 3lij_A          116 ECYKGGELFDEIIHR  130 (494)
T ss_dssp             ECCCSCBHHHHHHHH
T ss_pred             ecCCCCcHHHHHHHc
Confidence            999999999887653

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.30  E-value=3.2e-12  Score=117.25  Aligned_cols=94  Identities=29%  Similarity=0.386  Sum_probs=79.2

Q ss_pred             hccCCCcCceecccCceEEEEEEc------CCCCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCe
Q 017984          267 ATNYFHESNKLGQGGSGSVYKGTL------PGGEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPE  339 (363)
Q Consensus       267 ~~~~~~~~~~lg~G~~g~Vy~~~~------~~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  339 (363)
                      ..++|...+.||+|+||.||++.+      .+++.||||++... ......++.+|+.++.+++||||+++++++.....
T Consensus        28 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~  107 (327)
T 2yfx_A           28 PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP  107 (327)
T ss_dssp             CGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             ChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCC
Confidence            346788999999999999999984      34778999999754 44556679999999999999999999999999999


Q ss_pred             eEEEEEccCCCChhHHhhcCC
Q 017984          340 SLLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       340 ~~lv~Ey~~~gsL~~~l~~~~  360 (363)
                      .+|||||+++|+|.++|....
T Consensus       108 ~~lv~e~~~~~~L~~~l~~~~  128 (327)
T 2yfx_A          108 RFILMELMAGGDLKSFLRETR  128 (327)
T ss_dssp             CEEEEECCTTEEHHHHHHHTS
T ss_pred             cEEEEecCCCCcHHHHHHhhc
Confidence            999999999999999998653

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.30  E-value=3.5e-12  Score=125.30  Aligned_cols=93  Identities=23%  Similarity=0.259  Sum_probs=80.8

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLV  343 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  343 (363)
                      .++|...+.||+|+||.||++.. .+|+.||+|++...   .......+.+|+.+|..++||||+++++++.+.+.++||
T Consensus       183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV  262 (576)
T 2acx_A          183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV  262 (576)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence            45688889999999999999996 46999999999643   223345689999999999999999999999999999999


Q ss_pred             EEccCCCChhHHhhcCC
Q 017984          344 YEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       344 ~Ey~~~gsL~~~l~~~~  360 (363)
                      |||+++|+|.++|....
T Consensus       263 mEy~~gg~L~~~l~~~~  279 (576)
T 2acx_A          263 LTLMNGGDLKFHIYHMG  279 (576)
T ss_dssp             ECCCCSCBHHHHHHSSS
T ss_pred             EEcCCCCcHHHHHHhcC
Confidence            99999999999987643

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.30  E-value=2.4e-12  Score=115.25  Aligned_cols=92  Identities=29%  Similarity=0.414  Sum_probs=79.2

Q ss_pred             HhccCCCcCceecccCceEEEEEEcCCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEE
Q 017984          266 KATNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYE  345 (363)
Q Consensus       266 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  345 (363)
                      ...++|...+.||+|+||.||++...++..||+|.+.... ...+.|.+|+.++.+++||||+++++++. .+..++|||
T Consensus        10 v~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e   87 (279)
T 1qpc_A           10 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITE   87 (279)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred             cCHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEe
Confidence            3456788899999999999999998878899999997543 23567999999999999999999999876 456899999


Q ss_pred             ccCCCChhHHhhcC
Q 017984          346 FVPNQSLLDNLFDK  359 (363)
Q Consensus       346 y~~~gsL~~~l~~~  359 (363)
                      |+++++|.+++...
T Consensus        88 ~~~~~~L~~~l~~~  101 (279)
T 1qpc_A           88 YMENGSLVDFLKTP  101 (279)
T ss_dssp             CCTTCBHHHHTTSH
T ss_pred             cCCCCCHHHHHhcC
Confidence            99999999998753

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.30  E-value=8.1e-12  Score=114.66  Aligned_cols=84  Identities=23%  Similarity=0.241  Sum_probs=74.6

Q ss_pred             CceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcCC-CCCccceeeEEEeCCeeEEEEEccCCCC
Q 017984          274 SNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGIN-HKNLVKLLGCSITGPESLLVYEFVPNQS  351 (363)
Q Consensus       274 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~Ey~~~gs  351 (363)
                      .+.||+|+||.||++.. .+++.||||++...   ....+.+|+.++..+. ||||+++++++.+....+|||||+++|+
T Consensus        16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~   92 (325)
T 3kn6_A           16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE   92 (325)
T ss_dssp             SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred             CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence            47899999999999997 46899999999643   3456889999999997 9999999999999999999999999999


Q ss_pred             hhHHhhcCC
Q 017984          352 LLDNLFDKM  360 (363)
Q Consensus       352 L~~~l~~~~  360 (363)
                      |.+++..+.
T Consensus        93 L~~~l~~~~  101 (325)
T 3kn6_A           93 LFERIKKKK  101 (325)
T ss_dssp             HHHHHHHCS
T ss_pred             HHHHHHhcC
Confidence            999997654

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.30  E-value=1.3e-12  Score=125.35  Aligned_cols=92  Identities=24%  Similarity=0.183  Sum_probs=71.3

Q ss_pred             cCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVY  344 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  344 (363)
                      ++|...+.||+|+||.||++.. .+|+.||||++...   .......+.+|+.++..++||||+++++++...+.++|||
T Consensus       148 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~  227 (446)
T 4ejn_A          148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVM  227 (446)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEE
T ss_pred             HHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEE
Confidence            5678889999999999999996 56899999999742   3344567889999999999999999999999999999999


Q ss_pred             EccCCCChhHHhhcCC
Q 017984          345 EFVPNQSLLDNLFDKM  360 (363)
Q Consensus       345 Ey~~~gsL~~~l~~~~  360 (363)
                      ||+++|+|.+++....
T Consensus       228 e~~~~~~L~~~l~~~~  243 (446)
T 4ejn_A          228 EYANGGELFFHLSRER  243 (446)
T ss_dssp             CCCSSCBHHHHHHHHS
T ss_pred             eeCCCCcHHHHHHhcC
Confidence            9999999999887543

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.30  E-value=4.6e-12  Score=115.77  Aligned_cols=90  Identities=28%  Similarity=0.423  Sum_probs=65.2

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNT-TQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYE  345 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  345 (363)
                      .++|...+.||+|+||.||++.. .+|+.||+|++.... ....+.+.+|+.++.+++||||+++++++..++..+||||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   83 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE   83 (317)
T ss_dssp             ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred             ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence            45688899999999999999996 468999999997542 2334678999999999999999999999999999999999


Q ss_pred             ccCCCChhHHhhc
Q 017984          346 FVPNQSLLDNLFD  358 (363)
Q Consensus       346 y~~~gsL~~~l~~  358 (363)
                      |++ |+|.+++..
T Consensus        84 ~~~-~~L~~~l~~   95 (317)
T 2pmi_A           84 FMD-NDLKKYMDS   95 (317)
T ss_dssp             CCC-CBHHHHHHH
T ss_pred             ecC-CCHHHHHHh
Confidence            998 599998864

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.30  E-value=7.6e-12  Score=112.78  Aligned_cols=89  Identities=26%  Similarity=0.399  Sum_probs=75.9

Q ss_pred             cCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYE  345 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  345 (363)
                      ++|...+.||+|+||.||++.. .+++.||+|++...  .......+.+|+.++.+++||||+++++++..++..+||||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   81 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence            4688889999999999999996 46899999999753  33345678999999999999999999999999999999999


Q ss_pred             ccCCCChhHHhhc
Q 017984          346 FVPNQSLLDNLFD  358 (363)
Q Consensus       346 y~~~gsL~~~l~~  358 (363)
                      |+++ +|.+++..
T Consensus        82 ~~~~-~l~~~~~~   93 (292)
T 3o0g_A           82 FCDQ-DLKKYFDS   93 (292)
T ss_dssp             CCSE-EHHHHHHH
T ss_pred             cCCC-CHHHHHHh
Confidence            9986 56555543

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.30  E-value=2.3e-12  Score=118.96  Aligned_cols=91  Identities=21%  Similarity=0.303  Sum_probs=78.2

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLV  343 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  343 (363)
                      .++|...+.||+|+||.||++.. .+++.||+|++...   .......+.+|+.++..++||||+++++++...+..+||
T Consensus         8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv   87 (336)
T 3h4j_B            8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV   87 (336)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence            46788999999999999999996 56899999999642   112235689999999999999999999999999999999


Q ss_pred             EEccCCCChhHHhhcC
Q 017984          344 YEFVPNQSLLDNLFDK  359 (363)
Q Consensus       344 ~Ey~~~gsL~~~l~~~  359 (363)
                      |||+ +|+|.+++..+
T Consensus        88 ~E~~-~g~l~~~l~~~  102 (336)
T 3h4j_B           88 IEYA-GGELFDYIVEK  102 (336)
T ss_dssp             ECCC-CEEHHHHHHHH
T ss_pred             EECC-CCcHHHHHHHc
Confidence            9999 68999988654

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.30  E-value=4.3e-12  Score=117.92  Aligned_cols=106  Identities=21%  Similarity=0.219  Sum_probs=89.2

Q ss_pred             cCcccccchHHHHHhccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcCC-----CCC
Q 017984          253 NKSKLNFSYETLEKATNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGIN-----HKN  326 (363)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-----h~n  326 (363)
                      ..+...+++.+.....++|...+.||+|+||.||++.. .+++.||||++... ......+..|+.++..++     |||
T Consensus        19 ~~~~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~   97 (360)
T 3llt_A           19 DDEIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNN   97 (360)
T ss_dssp             -CGGGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGG
T ss_pred             CccceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCC
Confidence            33445566666667788999999999999999999996 56889999999643 344566889999999986     999


Q ss_pred             ccceeeEEEeCCeeEEEEEccCCCChhHHhhcCC
Q 017984          327 LVKLLGCSITGPESLLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       327 iv~l~~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~  360 (363)
                      |+++++++...+..+|||||+ +++|.+++....
T Consensus        98 iv~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~  130 (360)
T 3llt_A           98 IVKYHGKFMYYDHMCLIFEPL-GPSLYEIITRNN  130 (360)
T ss_dssp             BCCEEEEEEETTEEEEEECCC-CCBHHHHHHHTT
T ss_pred             eecccceeeECCeeEEEEcCC-CCCHHHHHHhcC
Confidence            999999999999999999999 899999997654

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.30  E-value=5.2e-12  Score=122.33  Aligned_cols=93  Identities=23%  Similarity=0.296  Sum_probs=81.3

Q ss_pred             ccCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLV  343 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  343 (363)
                      .+.|...+.||+|+||.||++... +|+.||||++...   .....+.+.+|+.++.+++||||+++++++...+..++|
T Consensus        25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv  104 (484)
T 3nyv_A           25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV  104 (484)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence            345788899999999999999964 6899999999643   234467799999999999999999999999999999999


Q ss_pred             EEccCCCChhHHhhcCC
Q 017984          344 YEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       344 ~Ey~~~gsL~~~l~~~~  360 (363)
                      |||+++|+|.+++..+.
T Consensus       105 ~e~~~~~~L~~~~~~~~  121 (484)
T 3nyv_A          105 GEVYTGGELFDEIISRK  121 (484)
T ss_dssp             ECCCCSCBHHHHHHTCS
T ss_pred             EecCCCCCHHHHHHhcC
Confidence            99999999999887644

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.30  E-value=6.4e-12  Score=112.33  Aligned_cols=91  Identities=22%  Similarity=0.310  Sum_probs=79.1

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEe--CCeeEE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSIT--GPESLL  342 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~l  342 (363)
                      .++|...+.||+|+||.||++.. .+++.||+|.+...  .....+.+.+|+.++.+++||||+++++++..  ....++
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   84 (279)
T 2w5a_A            5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI   84 (279)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred             hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence            45688899999999999999996 46899999999753  34456779999999999999999999998754  578999


Q ss_pred             EEEccCCCChhHHhhc
Q 017984          343 VYEFVPNQSLLDNLFD  358 (363)
Q Consensus       343 v~Ey~~~gsL~~~l~~  358 (363)
                      ||||+++|+|.+++..
T Consensus        85 v~e~~~~~~L~~~l~~  100 (279)
T 2w5a_A           85 VMEYCEGGDLASVITK  100 (279)
T ss_dssp             EEECCTTEEHHHHHHH
T ss_pred             EEeCCCCCCHHHHHHh
Confidence            9999999999999864

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.29  E-value=3.5e-12  Score=120.37  Aligned_cols=92  Identities=29%  Similarity=0.442  Sum_probs=79.0

Q ss_pred             ccCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCccceeeEEEeCC--eeEEE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYNT-TQWVDHFFNEVNLISGINHKNLVKLLGCSITGP--ESLLV  343 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lv  343 (363)
                      .+.|...+.||+|+||.||++... +|+.||||++.... ....+.+.+|++++.+++||||+++++++....  ..+||
T Consensus         8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv   87 (396)
T 4eut_A            8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI   87 (396)
T ss_dssp             SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred             CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEE
Confidence            356888999999999999999974 58999999997532 234567899999999999999999999988755  78999


Q ss_pred             EEccCCCChhHHhhcC
Q 017984          344 YEFVPNQSLLDNLFDK  359 (363)
Q Consensus       344 ~Ey~~~gsL~~~l~~~  359 (363)
                      |||+++|+|.+++...
T Consensus        88 ~e~~~~g~L~~~l~~~  103 (396)
T 4eut_A           88 MEFCPCGSLYTVLEEP  103 (396)
T ss_dssp             ECCCTTEEHHHHTTSG
T ss_pred             EecCCCCCHHHHHHhh
Confidence            9999999999999764

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.29  E-value=3.7e-12  Score=118.37  Aligned_cols=93  Identities=23%  Similarity=0.183  Sum_probs=80.1

Q ss_pred             hccCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccC---ChhhHHHHHHHHHHHhcC-CCCCccceeeEEEeCCeeE
Q 017984          267 ATNYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYN---TTQWVDHFFNEVNLISGI-NHKNLVKLLGCSITGPESL  341 (363)
Q Consensus       267 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~  341 (363)
                      ..++|...+.||+|+||.||++... +++.||||+++..   .....+.+.+|..++..+ +||||+++++++...+.++
T Consensus        18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~   97 (353)
T 2i0e_A           18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY   97 (353)
T ss_dssp             -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred             chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence            3567889999999999999999975 4789999999753   223456788999999988 7999999999999999999


Q ss_pred             EEEEccCCCChhHHhhcC
Q 017984          342 LVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       342 lv~Ey~~~gsL~~~l~~~  359 (363)
                      |||||+++|+|.++|...
T Consensus        98 lv~E~~~gg~L~~~l~~~  115 (353)
T 2i0e_A           98 FVMEYVNGGDLMYHIQQV  115 (353)
T ss_dssp             EEEECCCSCBHHHHHHHH
T ss_pred             EEEeCCCCCcHHHHHHhc
Confidence            999999999999998753

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.29  E-value=2.7e-12  Score=117.42  Aligned_cols=96  Identities=24%  Similarity=0.371  Sum_probs=73.4

Q ss_pred             HHHHhccCCCcCceecccCceEEEEEEcCC-C---CEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEe
Q 017984          263 TLEKATNYFHESNKLGQGGSGSVYKGTLPG-G---EAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSIT  336 (363)
Q Consensus       263 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~-g---~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~  336 (363)
                      ++....++|...+.||+|+||.||++.... +   ..||||++...  .....+.|.+|+.++.+++||||+++++++..
T Consensus        17 ~~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~   96 (323)
T 3qup_A           17 DVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLR   96 (323)
T ss_dssp             TTBCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEEC
T ss_pred             hcccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeec
Confidence            334456778999999999999999999643 3   27999999754  34456789999999999999999999999987


Q ss_pred             CCee------EEEEEccCCCChhHHhhc
Q 017984          337 GPES------LLVYEFVPNQSLLDNLFD  358 (363)
Q Consensus       337 ~~~~------~lv~Ey~~~gsL~~~l~~  358 (363)
                      ....      ++||||+++|+|.+++..
T Consensus        97 ~~~~~~~~~~~~v~e~~~~~~L~~~l~~  124 (323)
T 3qup_A           97 SRAKGRLPIPMVILPFMKHGDLHAFLLA  124 (323)
T ss_dssp             C-------CEEEEEECCTTCBHHHHHHH
T ss_pred             cccccCCCccEEEEEeccCCcHHHHHHh
Confidence            6655      999999999999999864

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.29  E-value=3.3e-12  Score=118.17  Aligned_cols=89  Identities=18%  Similarity=0.237  Sum_probs=76.7

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcC-CCCCccceeeEEEeCCeeEEEEE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGI-NHKNLVKLLGCSITGPESLLVYE  345 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E  345 (363)
                      .++|...+.||+|+||.||++.. .+++.||||++......    +.+|++++.++ +||||+++++++.+++..+||||
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E   96 (342)
T 2qr7_A           21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD----PTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTE   96 (342)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC----CHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred             cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC----hHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEe
Confidence            45688899999999999999996 46889999999764322    45788888887 79999999999999999999999


Q ss_pred             ccCCCChhHHhhcCC
Q 017984          346 FVPNQSLLDNLFDKM  360 (363)
Q Consensus       346 y~~~gsL~~~l~~~~  360 (363)
                      |+++|+|.+++.++.
T Consensus        97 ~~~gg~L~~~i~~~~  111 (342)
T 2qr7_A           97 LMKGGELLDKILRQK  111 (342)
T ss_dssp             CCCSCBHHHHHHTCT
T ss_pred             CCCCCcHHHHHHHcC
Confidence            999999999987654

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.29  E-value=9.3e-12  Score=112.05  Aligned_cols=90  Identities=23%  Similarity=0.279  Sum_probs=76.9

Q ss_pred             CCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEe----CCeeEE
Q 017984          270 YFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSIT----GPESLL  342 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~l  342 (363)
                      .|...+.||+|+||.||++.. .++..||+|.+...  .....+.+.+|+.++.+++||||+++++++..    ....++
T Consensus        27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l  106 (290)
T 1t4h_A           27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL  106 (290)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred             eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence            366777899999999999986 45889999999743  45556789999999999999999999998875    356899


Q ss_pred             EEEccCCCChhHHhhcC
Q 017984          343 VYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       343 v~Ey~~~gsL~~~l~~~  359 (363)
                      ||||+++|+|.+++...
T Consensus       107 v~e~~~~~~L~~~l~~~  123 (290)
T 1t4h_A          107 VTELMTSGTLKTYLKRF  123 (290)
T ss_dssp             EEECCCSCBHHHHHHHH
T ss_pred             EEEecCCCCHHHHHHHc
Confidence            99999999999999753

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.29  E-value=9.8e-12  Score=111.77  Aligned_cols=90  Identities=23%  Similarity=0.341  Sum_probs=76.1

Q ss_pred             cCCCcCc-eecccCceEEEEEEcC---CCCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEE
Q 017984          269 NYFHESN-KLGQGGSGSVYKGTLP---GGEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLV  343 (363)
Q Consensus       269 ~~~~~~~-~lg~G~~g~Vy~~~~~---~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  343 (363)
                      ++|...+ .||+|+||.||++...   ++..||+|+++.. .....+.+.+|+.++.+++||||+++++++ ..+..++|
T Consensus         9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv   87 (287)
T 1u59_A            9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLV   87 (287)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEE
T ss_pred             HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEE
Confidence            3455555 8999999999999853   5778999999864 445567899999999999999999999998 55678999


Q ss_pred             EEccCCCChhHHhhcC
Q 017984          344 YEFVPNQSLLDNLFDK  359 (363)
Q Consensus       344 ~Ey~~~gsL~~~l~~~  359 (363)
                      |||+++++|.+++...
T Consensus        88 ~e~~~~~~L~~~l~~~  103 (287)
T 1u59_A           88 MEMAGGGPLHKFLVGK  103 (287)
T ss_dssp             EECCTTEEHHHHHTTC
T ss_pred             EEeCCCCCHHHHHHhC
Confidence            9999999999999654

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.28  E-value=8.2e-12  Score=116.53  Aligned_cols=95  Identities=18%  Similarity=0.298  Sum_probs=81.4

Q ss_pred             HHhccCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccCCh--------hhHHHHHHHHHHHhcC-CCCCccceeeEE
Q 017984          265 EKATNYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYNTT--------QWVDHFFNEVNLISGI-NHKNLVKLLGCS  334 (363)
Q Consensus       265 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~--------~~~~~~~~E~~~l~~l-~h~niv~l~~~~  334 (363)
                      ....++|...+.||+|+||.||++... +|+.||||++.....        ...+.+.+|+.++.++ +||||+++++++
T Consensus        90 ~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~  169 (365)
T 2y7j_A           90 KEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSY  169 (365)
T ss_dssp             HHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred             hhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEE
Confidence            344567888999999999999999974 699999999975421        2245688999999999 799999999999


Q ss_pred             EeCCeeEEEEEccCCCChhHHhhcC
Q 017984          335 ITGPESLLVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       335 ~~~~~~~lv~Ey~~~gsL~~~l~~~  359 (363)
                      ......+|||||+++|+|.+++.+.
T Consensus       170 ~~~~~~~lv~e~~~g~~L~~~l~~~  194 (365)
T 2y7j_A          170 ESSSFMFLVFDLMRKGELFDYLTEK  194 (365)
T ss_dssp             EBSSEEEEEECCCTTCBHHHHHHHH
T ss_pred             eeCCEEEEEEEeCCCCcHHHHHHhc
Confidence            9999999999999999999998754

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.28  E-value=3.3e-12  Score=123.80  Aligned_cols=91  Identities=22%  Similarity=0.298  Sum_probs=79.5

Q ss_pred             cCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYE  345 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  345 (363)
                      +.|...+.||+|+||.||++.. .+++.||||++...  .......+.+|+.++.+++||||+++++++......++|||
T Consensus        22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e  101 (486)
T 3mwu_A           22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE  101 (486)
T ss_dssp             HHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             cceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEE
Confidence            4588899999999999999996 46899999999642  22335679999999999999999999999999999999999


Q ss_pred             ccCCCChhHHhhcC
Q 017984          346 FVPNQSLLDNLFDK  359 (363)
Q Consensus       346 y~~~gsL~~~l~~~  359 (363)
                      |+++|+|.+++...
T Consensus       102 ~~~~~~L~~~~~~~  115 (486)
T 3mwu_A          102 LYTGGELFDEIIKR  115 (486)
T ss_dssp             CCCSCBHHHHHHHH
T ss_pred             cCCCCcHHHHHHhc
Confidence            99999999888653

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.28  E-value=7.6e-12  Score=112.95  Aligned_cols=91  Identities=23%  Similarity=0.362  Sum_probs=78.1

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEe----------
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSIT----------  336 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----------  336 (363)
                      .++|...+.||+|+||.||++.. .+++.||||++... ....+.+.+|+.++.+++||||+++++++..          
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~   83 (303)
T 1zy4_A            5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA   83 (303)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred             cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence            35678889999999999999996 46899999999643 3445779999999999999999999998865          


Q ss_pred             ---CCeeEEEEEccCCCChhHHhhcC
Q 017984          337 ---GPESLLVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       337 ---~~~~~lv~Ey~~~gsL~~~l~~~  359 (363)
                         ....++||||+++|+|.+++...
T Consensus        84 ~~~~~~~~lv~e~~~~~~L~~~l~~~  109 (303)
T 1zy4_A           84 VKKKSTLFIQMEYCENGTLYDLIHSE  109 (303)
T ss_dssp             --CEEEEEEEEECCCSCBHHHHHHHS
T ss_pred             cccCCceEEEEecCCCCCHHHhhhcc
Confidence               35789999999999999999754

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.28  E-value=2.8e-12  Score=118.52  Aligned_cols=87  Identities=22%  Similarity=0.275  Sum_probs=77.4

Q ss_pred             ccCCCcCceecccCceEEEEEEcCCCCEEEEEEeccCChh-----------------hHHHHHHHHHHHhcCCCCCccce
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQ-----------------WVDHFFNEVNLISGINHKNLVKL  330 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~-----------------~~~~~~~E~~~l~~l~h~niv~l  330 (363)
                      .++|...+.||+|+||.||++.. +++.||||++......                 ..+.|.+|+.++.+++||||+++
T Consensus        30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~  108 (348)
T 2pml_X           30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC  108 (348)
T ss_dssp             ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred             cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence            46788999999999999999999 8999999999642111                 11679999999999999999999


Q ss_pred             eeEEEeCCeeEEEEEccCCCChhHH
Q 017984          331 LGCSITGPESLLVYEFVPNQSLLDN  355 (363)
Q Consensus       331 ~~~~~~~~~~~lv~Ey~~~gsL~~~  355 (363)
                      ++++...+..++||||+++|+|.++
T Consensus       109 ~~~~~~~~~~~lv~e~~~~~~L~~~  133 (348)
T 2pml_X          109 EGIITNYDEVYIIYEYMENDSILKF  133 (348)
T ss_dssp             SEEEESSSEEEEEEECCTTCBSSEE
T ss_pred             EEEEeeCCeEEEEEeccCCCcHHHH
Confidence            9999999999999999999999998

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.28  E-value=4.9e-12  Score=123.73  Aligned_cols=92  Identities=18%  Similarity=0.300  Sum_probs=80.2

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLV  343 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  343 (363)
                      .++|...+.||+|+||.||++.. .+|+.||+|++...   .....+.+.+|+.++.+++||||+++++++.....++||
T Consensus       184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV  263 (543)
T 3c4z_A          184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV  263 (543)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence            35678889999999999999997 46899999999643   123356789999999999999999999999999999999


Q ss_pred             EEccCCCChhHHhhcC
Q 017984          344 YEFVPNQSLLDNLFDK  359 (363)
Q Consensus       344 ~Ey~~~gsL~~~l~~~  359 (363)
                      |||+++|+|.++|...
T Consensus       264 mE~~~gg~L~~~l~~~  279 (543)
T 3c4z_A          264 MTIMNGGDIRYHIYNV  279 (543)
T ss_dssp             ECCCTTCBHHHHHHTS
T ss_pred             EEeccCCCHHHHHHHh
Confidence            9999999999998754

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.28  E-value=7.1e-12  Score=115.40  Aligned_cols=91  Identities=26%  Similarity=0.398  Sum_probs=77.9

Q ss_pred             cCCCcCceecccCceEEEEEEcCC-----CCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTLPG-----GEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLL  342 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~~~-----g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  342 (363)
                      +.|...+.||+|+||.||++....     +..||||++... .......|.+|+.++.+++||||+++++++...+..+|
T Consensus        44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  123 (333)
T 1mqb_A           44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI  123 (333)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence            456667899999999999998632     246999999754 34455679999999999999999999999999999999


Q ss_pred             EEEccCCCChhHHhhcC
Q 017984          343 VYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       343 v~Ey~~~gsL~~~l~~~  359 (363)
                      ||||+++|+|.+++..+
T Consensus       124 v~e~~~~~~L~~~l~~~  140 (333)
T 1mqb_A          124 ITEYMENGALDKFLREK  140 (333)
T ss_dssp             EEECCTTEEHHHHHHHT
T ss_pred             EEeCCCCCcHHHHHHhC
Confidence            99999999999999754

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.27  E-value=9e-12  Score=113.45  Aligned_cols=93  Identities=25%  Similarity=0.381  Sum_probs=75.3

Q ss_pred             ccCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEE-----------
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSI-----------  335 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-----------  335 (363)
                      .++|...+.||+|+||.||++... +++.||+|++........+.+.+|+.++.+++||||+++++++.           
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   89 (320)
T 2i6l_A           10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG   89 (320)
T ss_dssp             TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred             CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence            356888999999999999999975 58999999998777777788999999999999999999998873           


Q ss_pred             ---eCCeeEEEEEccCCCChhHHhhcCCC
Q 017984          336 ---TGPESLLVYEFVPNQSLLDNLFDKML  361 (363)
Q Consensus       336 ---~~~~~~lv~Ey~~~gsL~~~l~~~~~  361 (363)
                         .....++||||++ |+|.+++.+.+.
T Consensus        90 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~  117 (320)
T 2i6l_A           90 SLTELNSVYIVQEYME-TDLANVLEQGPL  117 (320)
T ss_dssp             -CCSCSEEEEEEECCS-EEHHHHHTTCCC
T ss_pred             cccccCceeEEeeccC-CCHHHHhhcCCc
Confidence               3468899999998 699999876543

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.27  E-value=4.6e-12  Score=113.68  Aligned_cols=91  Identities=23%  Similarity=0.346  Sum_probs=79.0

Q ss_pred             cCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVY  344 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  344 (363)
                      ++|...+.||+|+||.||++... +++.||+|++...   .....+.+.+|+.++..++||||+++++++...+..++||
T Consensus        14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   93 (284)
T 2vgo_A           14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML   93 (284)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence            56888899999999999999964 5789999999643   1223467999999999999999999999999999999999


Q ss_pred             EccCCCChhHHhhcC
Q 017984          345 EFVPNQSLLDNLFDK  359 (363)
Q Consensus       345 Ey~~~gsL~~~l~~~  359 (363)
                      ||+++|+|.+++..+
T Consensus        94 e~~~~~~L~~~l~~~  108 (284)
T 2vgo_A           94 EFAPRGELYKELQKH  108 (284)
T ss_dssp             CCCTTEEHHHHHHHH
T ss_pred             EeCCCCcHHHHHHhc
Confidence            999999999998754

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.27  E-value=5.1e-12  Score=116.15  Aligned_cols=96  Identities=24%  Similarity=0.368  Sum_probs=78.0

Q ss_pred             HHHhccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCC--hhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCee
Q 017984          264 LEKATNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNT--TQWVDHFFNEVNLISGINHKNLVKLLGCSITGPES  340 (363)
Q Consensus       264 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  340 (363)
                      .....++|...+.||+|+||.||++.. .+++.||||++....  ....+.+.+|+.++.+++||||+++++++...+..
T Consensus        29 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  108 (329)
T 3gbz_A           29 SATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRL  108 (329)
T ss_dssp             ---CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEE
T ss_pred             cccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEE
Confidence            344567899999999999999999985 568899999997542  23345688999999999999999999999999999


Q ss_pred             EEEEEccCCCChhHHhhcCC
Q 017984          341 LLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       341 ~lv~Ey~~~gsL~~~l~~~~  360 (363)
                      +|||||+++ +|.+++..+.
T Consensus       109 ~lv~e~~~~-~L~~~~~~~~  127 (329)
T 3gbz_A          109 HLIFEYAEN-DLKKYMDKNP  127 (329)
T ss_dssp             EEEEECCSE-EHHHHHHHCT
T ss_pred             EEEEecCCC-CHHHHHhhcC
Confidence            999999985 9999987654

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.27  E-value=4.6e-12  Score=115.25  Aligned_cols=87  Identities=28%  Similarity=0.387  Sum_probs=75.3

Q ss_pred             cCCCcCceecccCceEEEEEEcCCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEccC
Q 017984          269 NYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVP  348 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~~  348 (363)
                      ++|...+.||+|+||.||++... ++.||||++...  ...+.|.+|+.++.+++||||+++++++.  +..+|||||++
T Consensus         8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~~   82 (307)
T 2eva_A            8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAE   82 (307)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECCT
T ss_pred             hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcCC
Confidence            45778889999999999999975 788999998643  34567999999999999999999999876  44899999999


Q ss_pred             CCChhHHhhcCC
Q 017984          349 NQSLLDNLFDKM  360 (363)
Q Consensus       349 ~gsL~~~l~~~~  360 (363)
                      +|+|.++|....
T Consensus        83 ~~~L~~~l~~~~   94 (307)
T 2eva_A           83 GGSLYNVLHGAE   94 (307)
T ss_dssp             TCBHHHHHHCSS
T ss_pred             CCCHHHHHhccC
Confidence            999999998653

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.27  E-value=8.5e-12  Score=111.81  Aligned_cols=93  Identities=22%  Similarity=0.266  Sum_probs=78.0

Q ss_pred             hccCCCcCceecccCceEEEEEEcCC----CCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeE
Q 017984          267 ATNYFHESNKLGQGGSGSVYKGTLPG----GEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESL  341 (363)
Q Consensus       267 ~~~~~~~~~~lg~G~~g~Vy~~~~~~----g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  341 (363)
                      ..++|...+.||+|+||.||++....    +..||+|.+... .....+.|.+|+.++.+++||||+++++++ .++..+
T Consensus        13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-~~~~~~   91 (281)
T 1mp8_A           13 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVW   91 (281)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-CSSSCE
T ss_pred             ehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEE-ccCccE
Confidence            34568889999999999999998632    457999998754 344567799999999999999999999987 456789


Q ss_pred             EEEEccCCCChhHHhhcCC
Q 017984          342 LVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       342 lv~Ey~~~gsL~~~l~~~~  360 (363)
                      +||||+++|+|.+++..+.
T Consensus        92 lv~e~~~~~~L~~~l~~~~  110 (281)
T 1mp8_A           92 IIMELCTLGELRSFLQVRK  110 (281)
T ss_dssp             EEEECCTTEEHHHHHHHTT
T ss_pred             EEEecCCCCCHHHHHHhcC
Confidence            9999999999999997543

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.27  E-value=7.7e-12  Score=112.47  Aligned_cols=92  Identities=22%  Similarity=0.303  Sum_probs=80.4

Q ss_pred             ccCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVY  344 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  344 (363)
                      .++|...+.||+|+||.||++... +++.||+|++...  .....+.+.+|+.++.+++||||+++++++...+..++||
T Consensus        21 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  100 (287)
T 2wei_A           21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG  100 (287)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEE
Confidence            356888999999999999999974 6899999999643  2334677999999999999999999999999999999999


Q ss_pred             EccCCCChhHHhhcC
Q 017984          345 EFVPNQSLLDNLFDK  359 (363)
Q Consensus       345 Ey~~~gsL~~~l~~~  359 (363)
                      ||+++++|.+++.+.
T Consensus       101 e~~~~~~L~~~l~~~  115 (287)
T 2wei_A          101 ELYTGGELFDEIIKR  115 (287)
T ss_dssp             CCCCSCBHHHHHHHH
T ss_pred             EccCCCCHHHHHHhc
Confidence            999999999888643

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.27  E-value=8e-12  Score=114.59  Aligned_cols=92  Identities=26%  Similarity=0.393  Sum_probs=76.8

Q ss_pred             cCCCcCceecccCceEEEEEEcC-CCCE--EEEEEeccC-ChhhHHHHHHHHHHHhcC-CCCCccceeeEEEeCCeeEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTLP-GGEA--VAVKRLFYN-TTQWVDHFFNEVNLISGI-NHKNLVKLLGCSITGPESLLV  343 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~--vavK~l~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv  343 (363)
                      ++|...+.||+|+||.||++... ++..  +|+|.+... .....+.+.+|+.++.++ +||||+++++++...+..+||
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv  104 (327)
T 1fvr_A           25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA  104 (327)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence            56788899999999999999963 4554  499998753 334456799999999999 899999999999999999999


Q ss_pred             EEccCCCChhHHhhcCC
Q 017984          344 YEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       344 ~Ey~~~gsL~~~l~~~~  360 (363)
                      |||+++|+|.+++.+..
T Consensus       105 ~e~~~~~~L~~~l~~~~  121 (327)
T 1fvr_A          105 IEYAPHGNLLDFLRKSR  121 (327)
T ss_dssp             ECCCTTCBHHHHHHTTC
T ss_pred             EecCCCCCHHHHHHhcc
Confidence            99999999999997653

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.27  E-value=7.4e-12  Score=112.47  Aligned_cols=91  Identities=37%  Similarity=0.564  Sum_probs=76.2

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCChh---h----HHHHHHHHHHHhcCCCCCccceeeEEEeCCe
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQ---W----VDHFFNEVNLISGINHKNLVKLLGCSITGPE  339 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~----~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  339 (363)
                      .++|...+.||+|+||.||++.. .+++.||+|++......   .    .+.|.+|+.++.+++||||+++++++.... 
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-   96 (287)
T 4f0f_A           18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-   96 (287)
T ss_dssp             STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred             hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence            46788899999999999999996 56899999999653221   1    167999999999999999999999886654 


Q ss_pred             eEEEEEccCCCChhHHhhcCC
Q 017984          340 SLLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       340 ~~lv~Ey~~~gsL~~~l~~~~  360 (363)
                       ++||||+++|+|.+++.++.
T Consensus        97 -~lv~e~~~~~~L~~~l~~~~  116 (287)
T 4f0f_A           97 -RMVMEFVPCGDLYHRLLDKA  116 (287)
T ss_dssp             -EEEEECCTTCBHHHHHHCTT
T ss_pred             -eEEEEecCCCCHHHHHhccc
Confidence             79999999999999886553

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.27  E-value=6e-12  Score=116.68  Aligned_cols=89  Identities=26%  Similarity=0.431  Sum_probs=76.7

Q ss_pred             cCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNT---TQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVY  344 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  344 (363)
                      +.|...+.||+|+||.||++.. .+++.||||++....   ....+.|.+|+.++.+++||||+++++++..++..+|||
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  133 (348)
T 1u5q_A           54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM  133 (348)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence            3477888999999999999995 578999999997532   233567999999999999999999999999999999999


Q ss_pred             EccCCCChhHHhhc
Q 017984          345 EFVPNQSLLDNLFD  358 (363)
Q Consensus       345 Ey~~~gsL~~~l~~  358 (363)
                      ||++ |+|.+++..
T Consensus       134 e~~~-g~l~~~l~~  146 (348)
T 1u5q_A          134 EYCL-GSASDLLEV  146 (348)
T ss_dssp             ECCS-EEHHHHHHH
T ss_pred             ecCC-CCHHHHHHH
Confidence            9997 688887753

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.27  E-value=7.4e-12  Score=116.43  Aligned_cols=101  Identities=21%  Similarity=0.292  Sum_probs=84.3

Q ss_pred             cchHHHHHhccCCCcCceecccCceEEEEEEcCCCCEEEEEEeccC-----------ChhhHHHHHHHHHHHhcCCCCCc
Q 017984          259 FSYETLEKATNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYN-----------TTQWVDHFFNEVNLISGINHKNL  327 (363)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~-----------~~~~~~~~~~E~~~l~~l~h~ni  327 (363)
                      ....++....++|...+.||+|+||.||++...+|+.||||++...           .....+.+.+|+.++.+++||||
T Consensus        12 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i   91 (362)
T 3pg1_A           12 DLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNI   91 (362)
T ss_dssp             HHHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTB
T ss_pred             HHHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCc
Confidence            3456778888999999999999999999999878999999998642           11224679999999999999999


Q ss_pred             cceeeEEEeC-----CeeEEEEEccCCCChhHHhhcCC
Q 017984          328 VKLLGCSITG-----PESLLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       328 v~l~~~~~~~-----~~~~lv~Ey~~~gsL~~~l~~~~  360 (363)
                      +++++++...     ...+|||||++ |+|.+++....
T Consensus        92 v~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~  128 (362)
T 3pg1_A           92 LGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQR  128 (362)
T ss_dssp             CCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTT
T ss_pred             cceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcc
Confidence            9999998542     36899999998 68988887653

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.27  E-value=3.6e-12  Score=119.33  Aligned_cols=92  Identities=23%  Similarity=0.253  Sum_probs=70.1

Q ss_pred             ccCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccC---ChhhHHHHHHHHHH-HhcCCCCCccceeeEEEeCCeeEE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYN---TTQWVDHFFNEVNL-ISGINHKNLVKLLGCSITGPESLL  342 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~---~~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~l  342 (363)
                      .++|...+.||+|+||.||++... +++.||||++...   .......+.+|..+ +..++||||+++++++...+.++|
T Consensus        37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l  116 (373)
T 2r5t_A           37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF  116 (373)
T ss_dssp             GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred             hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence            356888999999999999999974 5889999999753   22334557778776 567899999999999999999999


Q ss_pred             EEEccCCCChhHHhhcC
Q 017984          343 VYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       343 v~Ey~~~gsL~~~l~~~  359 (363)
                      ||||+++|+|.++|.+.
T Consensus       117 v~E~~~gg~L~~~l~~~  133 (373)
T 2r5t_A          117 VLDYINGGELFYHLQRE  133 (373)
T ss_dssp             EEECCCSCBHHHHHHHH
T ss_pred             EEeCCCCCcHHHHHHhc
Confidence            99999999999998754

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.27  E-value=7.9e-12  Score=124.54  Aligned_cols=83  Identities=25%  Similarity=0.356  Sum_probs=72.1

Q ss_pred             eecccCceEEEEEEcC---CCCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEccCCCC
Q 017984          276 KLGQGGSGSVYKGTLP---GGEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQS  351 (363)
Q Consensus       276 ~lg~G~~g~Vy~~~~~---~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~~~gs  351 (363)
                      .||+|+||.||+|.+.   ++..||||+++.. .....++|.+|+.+|.+++|||||++++++.. +..+|||||+++|+
T Consensus       343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~  421 (613)
T 2ozo_A          343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP  421 (613)
T ss_dssp             EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred             EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence            7999999999999863   4568999999764 33456789999999999999999999999876 56899999999999


Q ss_pred             hhHHhhcC
Q 017984          352 LLDNLFDK  359 (363)
Q Consensus       352 L~~~l~~~  359 (363)
                      |.++|..+
T Consensus       422 L~~~l~~~  429 (613)
T 2ozo_A          422 LHKFLVGK  429 (613)
T ss_dssp             HHHHHTTC
T ss_pred             HHHHHhhc
Confidence            99999754

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.27  E-value=1e-11  Score=114.04  Aligned_cols=92  Identities=26%  Similarity=0.342  Sum_probs=79.3

Q ss_pred             ccCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVY  344 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  344 (363)
                      .++|...+.||+|+||.||++... +|+.||+|++...  .....+.+.+|+.++.+++||||+++++++...+..++||
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  103 (331)
T 4aaa_A           24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF  103 (331)
T ss_dssp             GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence            356788899999999999999974 5899999998654  3344566889999999999999999999999999999999


Q ss_pred             EccCCCChhHHhhcC
Q 017984          345 EFVPNQSLLDNLFDK  359 (363)
Q Consensus       345 Ey~~~gsL~~~l~~~  359 (363)
                      ||+++++|.+++...
T Consensus       104 e~~~~~~l~~~~~~~  118 (331)
T 4aaa_A          104 EFVDHTILDDLELFP  118 (331)
T ss_dssp             ECCSEEHHHHHHHST
T ss_pred             ecCCcchHHHHHhhc
Confidence            999999998876543

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.27  E-value=5.5e-12  Score=113.66  Aligned_cols=92  Identities=24%  Similarity=0.332  Sum_probs=75.9

Q ss_pred             ccCCCcCc-eecccCceEEEEEEc---CCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeE
Q 017984          268 TNYFHESN-KLGQGGSGSVYKGTL---PGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESL  341 (363)
Q Consensus       268 ~~~~~~~~-~lg~G~~g~Vy~~~~---~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  341 (363)
                      .+.|...+ .||+|+||.||++.+   .+++.||||++...  .....++|.+|+.++..++||||+++++++ ..+..+
T Consensus        15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~   93 (291)
T 1xbb_A           15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWM   93 (291)
T ss_dssp             GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEE
T ss_pred             chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcE
Confidence            44566666 899999999999964   34678999999754  233467799999999999999999999998 667789


Q ss_pred             EEEEccCCCChhHHhhcCC
Q 017984          342 LVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       342 lv~Ey~~~gsL~~~l~~~~  360 (363)
                      +||||+++++|.+++..+.
T Consensus        94 lv~e~~~~~~L~~~l~~~~  112 (291)
T 1xbb_A           94 LVMEMAELGPLNKYLQQNR  112 (291)
T ss_dssp             EEEECCTTEEHHHHHHHCT
T ss_pred             EEEEeCCCCCHHHHHHhCc
Confidence            9999999999999997654

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.26  E-value=7.4e-12  Score=114.55  Aligned_cols=92  Identities=18%  Similarity=0.242  Sum_probs=74.8

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCC--------hhhHHHHHHHHHHHhcCCCCCccceeeEEEeCC
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNT--------TQWVDHFFNEVNLISGINHKNLVKLLGCSITGP  338 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~--------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~  338 (363)
                      .++|...+.||+|+||.||++.. .+++.||||++....        ......+.+|+.++.+++||||+++++++..+.
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~   88 (322)
T 2ycf_A            9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED   88 (322)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred             hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence            35688899999999999999996 458899999996431        122345889999999999999999999987654


Q ss_pred             eeEEEEEccCCCChhHHhhcCC
Q 017984          339 ESLLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       339 ~~~lv~Ey~~~gsL~~~l~~~~  360 (363)
                       .++||||+++|+|.+++..+.
T Consensus        89 -~~lv~e~~~~~~L~~~~~~~~  109 (322)
T 2ycf_A           89 -YYIVLELMEGGELFDKVVGNK  109 (322)
T ss_dssp             -EEEEEECCTTEETHHHHSTTC
T ss_pred             -eEEEEecCCCCcHHHHHhccC
Confidence             899999999999999887653

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.26  E-value=1.7e-11  Score=110.81  Aligned_cols=90  Identities=26%  Similarity=0.377  Sum_probs=73.9

Q ss_pred             ccCCCcCceecccCceEEEEEEcCCCCEEEEEEeccCChhhHHHHHHHHHHHhc--CCCCCccceeeEEEeC----CeeE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISG--INHKNLVKLLGCSITG----PESL  341 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~----~~~~  341 (363)
                      .++|...+.||+|+||.||++.. +++.||||++...   ....+.+|.+++..  ++||||+++++++...    ...+
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~   82 (301)
T 3q4u_A            7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW   82 (301)
T ss_dssp             GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred             cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence            45788899999999999999988 5889999998643   33456677777766  7999999999986652    4689


Q ss_pred             EEEEccCCCChhHHhhcCCC
Q 017984          342 LVYEFVPNQSLLDNLFDKML  361 (363)
Q Consensus       342 lv~Ey~~~gsL~~~l~~~~~  361 (363)
                      +||||+++|+|.+++.....
T Consensus        83 lv~e~~~~g~L~~~l~~~~~  102 (301)
T 3q4u_A           83 LITHYHEMGSLYDYLQLTTL  102 (301)
T ss_dssp             EEECCCTTCBHHHHHTTCCB
T ss_pred             EehhhccCCCHHHHHhhccc
Confidence            99999999999999976543

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.26  E-value=1.5e-11  Score=111.11  Aligned_cols=92  Identities=26%  Similarity=0.375  Sum_probs=76.3

Q ss_pred             cCCCcCceecccCceEEEEEEcCC----CCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEE-eCCeeEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTLPG----GEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSI-TGPESLL  342 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~~~----g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~~~~~l  342 (363)
                      ..|...+.||+|+||.||++...+    ...+|+|.+... .....+.|.+|+.++++++||||+++++++. .++..++
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  104 (298)
T 3f66_A           25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV  104 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred             eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence            447778899999999999998632    236899999754 4455678999999999999999999999865 4568899


Q ss_pred             EEEccCCCChhHHhhcCC
Q 017984          343 VYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       343 v~Ey~~~gsL~~~l~~~~  360 (363)
                      ||||+++|+|.+++....
T Consensus       105 v~e~~~~~~L~~~l~~~~  122 (298)
T 3f66_A          105 VLPYMKHGDLRNFIRNET  122 (298)
T ss_dssp             EEECCTTCBHHHHHHCTT
T ss_pred             EEeCCCCCCHHHHHHhcc
Confidence            999999999999997643

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.24  E-value=3.7e-12  Score=115.18  Aligned_cols=94  Identities=22%  Similarity=0.339  Sum_probs=66.2

Q ss_pred             HHhccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEE
Q 017984          265 EKATNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNT-TQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLL  342 (363)
Q Consensus       265 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  342 (363)
                      ....++|...+.||+|+||.||++.. .+++.||||++.... ....+++.+|+.++.+++||||+++++++...+..++
T Consensus        11 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   90 (303)
T 2vwi_A           11 SINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWL   90 (303)
T ss_dssp             --CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEE
T ss_pred             ccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEE
Confidence            34467899999999999999999996 468899999986532 3345678999999999999999999999999999999


Q ss_pred             EEEccCCCChhHHhhc
Q 017984          343 VYEFVPNQSLLDNLFD  358 (363)
Q Consensus       343 v~Ey~~~gsL~~~l~~  358 (363)
                      ||||+++|+|.+++..
T Consensus        91 v~e~~~~~~L~~~l~~  106 (303)
T 2vwi_A           91 VMKLLSGGSVLDIIKH  106 (303)
T ss_dssp             EEECCTTCBHHHHHHH
T ss_pred             EehhccCCchHHHHHH
Confidence            9999999999999863

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.24  E-value=1.7e-11  Score=111.63  Aligned_cols=90  Identities=24%  Similarity=0.410  Sum_probs=73.9

Q ss_pred             HhccCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEE
Q 017984          266 KATNYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVY  344 (363)
Q Consensus       266 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  344 (363)
                      ...+.|...+.||+|+||.||++... +|+.||+|.+....  ..+.+.+|+.++..++||||+++++++...+..++||
T Consensus        26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  103 (314)
T 3com_A           26 QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVM  103 (314)
T ss_dssp             ----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             cchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEe
Confidence            34567889999999999999999974 58999999997543  2356899999999999999999999999999999999


Q ss_pred             EccCCCChhHHhh
Q 017984          345 EFVPNQSLLDNLF  357 (363)
Q Consensus       345 Ey~~~gsL~~~l~  357 (363)
                      ||+++|+|.+++.
T Consensus       104 e~~~~~~L~~~~~  116 (314)
T 3com_A          104 EYCGAGSVSDIIR  116 (314)
T ss_dssp             ECCTTEEHHHHHH
T ss_pred             ecCCCCCHHHHHH
Confidence            9999999999986

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.24  E-value=5.9e-12  Score=115.26  Aligned_cols=100  Identities=24%  Similarity=0.373  Sum_probs=83.9

Q ss_pred             cchHHHHHhccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcC-CCCCccceeeEEEe
Q 017984          259 FSYETLEKATNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGI-NHKNLVKLLGCSIT  336 (363)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~  336 (363)
                      +++.++....+.|...+.||+|+||.||++.. .+++.||||++..... ..+.+.+|+.++.++ +||||+++++++..
T Consensus        14 ~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~   92 (326)
T 2x7f_A           14 IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD-EEEEIKQEINMLKKYSHHRNIATYYGAFIK   92 (326)
T ss_dssp             --CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS-TTHHHHHHHHHHHHHCCSTTBCCEEEEEEE
T ss_pred             ccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc-cHHHHHHHHHHHHhccCCCCeeeeeeEEee
Confidence            44555566788899999999999999999996 5689999999975432 345789999999998 79999999999987


Q ss_pred             ------CCeeEEEEEccCCCChhHHhhcC
Q 017984          337 ------GPESLLVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       337 ------~~~~~lv~Ey~~~gsL~~~l~~~  359 (363)
                            .+..+|||||+++|+|.+++...
T Consensus        93 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  121 (326)
T 2x7f_A           93 KNPPGMDDQLWLVMEFCGAGSVTDLIKNT  121 (326)
T ss_dssp             CC--CCCCEEEEEEECCTTEEHHHHHHHS
T ss_pred             ccCccccceEEEEEEcCCCCcHHHHHHhc
Confidence                  46899999999999999998753

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.23  E-value=1.8e-11  Score=113.19  Aligned_cols=92  Identities=22%  Similarity=0.308  Sum_probs=80.2

Q ss_pred             ccCCCcCceecccCceEEEEEEcCCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCC--CCccceeeEEEeCCeeEEE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINH--KNLVKLLGCSITGPESLLV  343 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~lv  343 (363)
                      .+.|...+.||+|+||.||++...+++.||||++...  .....+.|.+|+.++.+++|  |||+++++++..++..+||
T Consensus         8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv   87 (343)
T 3dbq_A            8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV   87 (343)
T ss_dssp             SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence            3458889999999999999999888999999999753  44556789999999999976  9999999999999999999


Q ss_pred             EEccCCCChhHHhhcCC
Q 017984          344 YEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       344 ~Ey~~~gsL~~~l~~~~  360 (363)
                      || +.+|+|.+++..+.
T Consensus        88 ~e-~~~~~L~~~l~~~~  103 (343)
T 3dbq_A           88 ME-CGNIDLNSWLKKKK  103 (343)
T ss_dssp             EC-CCSEEHHHHHHHSC
T ss_pred             Ee-CCCCCHHHHHHhcC
Confidence            99 46789999997654

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.23  E-value=1.1e-11  Score=110.93  Aligned_cols=87  Identities=26%  Similarity=0.413  Sum_probs=75.2

Q ss_pred             cCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEe-----------
Q 017984          269 NYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSIT-----------  336 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-----------  336 (363)
                      ++|...+.||+|+||.||++... +++.||+|++.....    .+.+|+.++.+++||||+++++++..           
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~   86 (284)
T 2a19_B           11 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNE----KAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKN   86 (284)
T ss_dssp             HHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCSG----GGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-------
T ss_pred             cccceeeeeccCCceEEEEEEEcCCCeEEEEEEeccccH----HHHHHHHHHHhCCCCCEEEEeeeEeccccCccccccc
Confidence            45788899999999999999974 689999999976542    47789999999999999999998864           


Q ss_pred             -----CCeeEEEEEccCCCChhHHhhcC
Q 017984          337 -----GPESLLVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       337 -----~~~~~lv~Ey~~~gsL~~~l~~~  359 (363)
                           ....++||||+++|+|.++|...
T Consensus        87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~  114 (284)
T 2a19_B           87 SSRSKTKCLFIQMEFCDKGTLEQWIEKR  114 (284)
T ss_dssp             --CCEEEEEEEEECCCCSCBHHHHHHHG
T ss_pred             ccccCcceEEEEEeccCCCCHHHHHhhc
Confidence                 44589999999999999999643

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.23  E-value=1.3e-12  Score=120.34  Aligned_cols=92  Identities=17%  Similarity=0.284  Sum_probs=71.6

Q ss_pred             ccCCCcCceecccCceEEEEEEcCCCCEEEEEEeccCC--------hhhHHHHHHHHHHHhcCC---------CCCccce
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNT--------TQWVDHFFNEVNLISGIN---------HKNLVKL  330 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~--------~~~~~~~~~E~~~l~~l~---------h~niv~l  330 (363)
                      .++|...+.||+|+||.||++.. +|+.||||++....        ....+.+.+|+.+++.++         ||||+++
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l   97 (336)
T 2vuw_A           19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL   97 (336)
T ss_dssp             HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred             cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence            35577889999999999999998 68999999997542        223467899999998886         6666666


Q ss_pred             eeEE-----------------Ee-------------CCeeEEEEEccCCCChhHHhhcCC
Q 017984          331 LGCS-----------------IT-------------GPESLLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       331 ~~~~-----------------~~-------------~~~~~lv~Ey~~~gsL~~~l~~~~  360 (363)
                      .+.+                 ..             .+..+|||||+++|+|.+.+.+..
T Consensus        98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~~  157 (336)
T 2vuw_A           98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTKL  157 (336)
T ss_dssp             EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTTTC
T ss_pred             cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHhcC
Confidence            6653                 22             678999999999998777775543

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.23  E-value=2.9e-11  Score=109.03  Aligned_cols=89  Identities=26%  Similarity=0.378  Sum_probs=74.9

Q ss_pred             CCcCceecccCceEEEEEEcC-C---CCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCee-EEEE
Q 017984          271 FHESNKLGQGGSGSVYKGTLP-G---GEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPES-LLVY  344 (363)
Q Consensus       271 ~~~~~~lg~G~~g~Vy~~~~~-~---g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~-~lv~  344 (363)
                      |...+.||+|+||.||++... +   +..+|+|.+... .....+.|.+|+.++.+++||||+++++++...+.. ++||
T Consensus        23 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~  102 (298)
T 3pls_A           23 THSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLL  102 (298)
T ss_dssp             EEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEE
T ss_pred             EccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEE
Confidence            455688999999999999852 2   337999999754 445567899999999999999999999999876655 9999


Q ss_pred             EccCCCChhHHhhcC
Q 017984          345 EFVPNQSLLDNLFDK  359 (363)
Q Consensus       345 Ey~~~gsL~~~l~~~  359 (363)
                      ||+.+|+|.+++...
T Consensus       103 e~~~~~~L~~~~~~~  117 (298)
T 3pls_A          103 PYMCHGDLLQFIRSP  117 (298)
T ss_dssp             CCCTTCBHHHHHHCT
T ss_pred             ecccCCCHHHHHhcc
Confidence            999999999999764

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=99.23  E-value=1.9e-11  Score=110.41  Aligned_cols=90  Identities=33%  Similarity=0.488  Sum_probs=75.9

Q ss_pred             cCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccCC--hhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYNT--TQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYE  345 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  345 (363)
                      ++|...+.||+|+||.||++... +|+.||||++....  ....+.+.+|+.++.+++||||+++++++..++..++|||
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (299)
T 2r3i_A            3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE   82 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence            56888999999999999999974 68999999987532  2234678999999999999999999999999999999999


Q ss_pred             ccCCCChhHHhhcC
Q 017984          346 FVPNQSLLDNLFDK  359 (363)
Q Consensus       346 y~~~gsL~~~l~~~  359 (363)
                      |++ |+|.+++...
T Consensus        83 ~~~-~~L~~~~~~~   95 (299)
T 2r3i_A           83 FLH-QDLKKFMDAS   95 (299)
T ss_dssp             CCS-EEHHHHHHHT
T ss_pred             ccc-CCHHHHHHhh
Confidence            997 5999998754

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.23  E-value=2.1e-11  Score=121.93  Aligned_cols=85  Identities=26%  Similarity=0.345  Sum_probs=72.4

Q ss_pred             ceecccCceEEEEEEc---CCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEccCC
Q 017984          275 NKLGQGGSGSVYKGTL---PGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPN  349 (363)
Q Consensus       275 ~~lg~G~~g~Vy~~~~---~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~~~  349 (363)
                      +.||+|+||.||+|.+   ..++.||||+++..  .....++|.+|+.+|.+++|||||++++++.. +..+|||||+++
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~  453 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL  453 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence            4799999999999965   34678999999753  33446789999999999999999999999864 568899999999


Q ss_pred             CChhHHhhcCC
Q 017984          350 QSLLDNLFDKM  360 (363)
Q Consensus       350 gsL~~~l~~~~  360 (363)
                      |+|.++|..+.
T Consensus       454 g~L~~~l~~~~  464 (635)
T 4fl3_A          454 GPLNKYLQQNR  464 (635)
T ss_dssp             EEHHHHHHHCT
T ss_pred             CCHHHHHhhCC
Confidence            99999997654

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.22  E-value=3.6e-11  Score=110.72  Aligned_cols=95  Identities=22%  Similarity=0.335  Sum_probs=80.1

Q ss_pred             HHHHHhccCCCcCceecccCceEEEEEEcCCCCEEEEEEeccCChhhHHHHHHHHHHHhc--CCCCCccceeeEEEeCC-
Q 017984          262 ETLEKATNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISG--INHKNLVKLLGCSITGP-  338 (363)
Q Consensus       262 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~-  338 (363)
                      ..-....++|...+.||+|+||.||++... |+.||||++...   ....+.+|++++..  ++||||+++++++.... 
T Consensus        35 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~  110 (342)
T 1b6c_B           35 LVQRTIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNG  110 (342)
T ss_dssp             HHHHHHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCS
T ss_pred             eecccccccEEEEeeecCCCCcEEEEEEEc-CccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCC
Confidence            333445577999999999999999999984 889999999643   34568889998887  78999999999998775 


Q ss_pred             ---eeEEEEEccCCCChhHHhhcCC
Q 017984          339 ---ESLLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       339 ---~~~lv~Ey~~~gsL~~~l~~~~  360 (363)
                         ..++||||+++|+|.++|.+..
T Consensus       111 ~~~~~~lv~e~~~~g~L~~~l~~~~  135 (342)
T 1b6c_B          111 TWTQLWLVSDYHEHGSLFDYLNRYT  135 (342)
T ss_dssp             SCCCEEEEECCCTTCBHHHHHHHCC
T ss_pred             ccceeEEEEeecCCCcHHHHHhccC
Confidence               7999999999999999997654

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.22  E-value=7.3e-12  Score=114.01  Aligned_cols=99  Identities=25%  Similarity=0.412  Sum_probs=77.6

Q ss_pred             cchHHHHHhccCCCcCceecccCceEEEEEEcC----CCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceee
Q 017984          259 FSYETLEKATNYFHESNKLGQGGSGSVYKGTLP----GGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLG  332 (363)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~----~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~  332 (363)
                      -.+.++....++|...+.||+|+||.||++...    .++.||+|++...  .....+.|.+|+.++.+++||||+++++
T Consensus        24 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~  103 (313)
T 3brb_A           24 NKLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLG  103 (313)
T ss_dssp             CCTTTTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCE
T ss_pred             hhHHhcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeE
Confidence            334455556677889999999999999999852    3458999999753  3445677999999999999999999999


Q ss_pred             EEEeCC-----eeEEEEEccCCCChhHHhh
Q 017984          333 CSITGP-----ESLLVYEFVPNQSLLDNLF  357 (363)
Q Consensus       333 ~~~~~~-----~~~lv~Ey~~~gsL~~~l~  357 (363)
                      ++....     ..++||||+++|+|.+++.
T Consensus       104 ~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~  133 (313)
T 3brb_A          104 VCIEMSSQGIPKPMVILPFMKYGDLHTYLL  133 (313)
T ss_dssp             EEEC-------CEEEEEECCTTCBHHHHHH
T ss_pred             EEeeccccCCcccEEEEecccCCCHHHHHH
Confidence            988754     3599999999999999985

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.22  E-value=4.7e-12  Score=117.73  Aligned_cols=92  Identities=22%  Similarity=0.252  Sum_probs=78.7

Q ss_pred             ccCCCcCceecccCceEEEEEEc----CCCCEEEEEEeccC----ChhhHHHHHHHHHHHhcC-CCCCccceeeEEEeCC
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL----PGGEAVAVKRLFYN----TTQWVDHFFNEVNLISGI-NHKNLVKLLGCSITGP  338 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~----~~g~~vavK~l~~~----~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~  338 (363)
                      .++|...+.||+|+||.||++..    .+++.||||+++..    .....+.+.+|+.++.++ +||||+++++++...+
T Consensus        53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~  132 (355)
T 1vzo_A           53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET  132 (355)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred             ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence            35688899999999999999986    36899999998642    122345578899999999 6999999999999999


Q ss_pred             eeEEEEEccCCCChhHHhhcC
Q 017984          339 ESLLVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       339 ~~~lv~Ey~~~gsL~~~l~~~  359 (363)
                      ..+|||||+++|+|.++|...
T Consensus       133 ~~~lv~e~~~~~~L~~~l~~~  153 (355)
T 1vzo_A          133 KLHLILDYINGGELFTHLSQR  153 (355)
T ss_dssp             EEEEEECCCCSCBHHHHHHHH
T ss_pred             eEEEEeecCCCCCHHHHHHHc
Confidence            999999999999999998754

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.22  E-value=1.2e-11  Score=115.69  Aligned_cols=90  Identities=28%  Similarity=0.419  Sum_probs=74.9

Q ss_pred             CCcCceecccCceEEEEEEcC--CC--CEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEe-CCeeEEEE
Q 017984          271 FHESNKLGQGGSGSVYKGTLP--GG--EAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSIT-GPESLLVY  344 (363)
Q Consensus       271 ~~~~~~lg~G~~g~Vy~~~~~--~g--~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~~lv~  344 (363)
                      |...+.||+|+||.||++.+.  ++  ..||+|.+... .....++|.+|+.++.+++||||+++++++.. ++..++||
T Consensus        91 ~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~  170 (373)
T 3c1x_A           91 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL  170 (373)
T ss_dssp             EEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEE
T ss_pred             eecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEE
Confidence            456678999999999999862  22  36899998753 44556789999999999999999999998754 56789999


Q ss_pred             EccCCCChhHHhhcCC
Q 017984          345 EFVPNQSLLDNLFDKM  360 (363)
Q Consensus       345 Ey~~~gsL~~~l~~~~  360 (363)
                      ||+++|+|.++|....
T Consensus       171 e~~~~g~L~~~l~~~~  186 (373)
T 3c1x_A          171 PYMKHGDLRNFIRNET  186 (373)
T ss_dssp             ECCTTCBHHHHHHCTT
T ss_pred             ECCCCCCHHHHHhhcc
Confidence            9999999999997643

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.21  E-value=6.7e-12  Score=115.72  Aligned_cols=93  Identities=19%  Similarity=0.194  Sum_probs=79.5

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCCh--------hhHHHHHHHHHHHhcCCCCCccceeeEEEeCC
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTT--------QWVDHFFNEVNLISGINHKNLVKLLGCSITGP  338 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~  338 (363)
                      .++|...+.||+|+||.||++.. .+++.||||++.....        .....+.+|+.++.+++||||+++++++...+
T Consensus        23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~  102 (335)
T 3dls_A           23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG  102 (335)
T ss_dssp             HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred             ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC
Confidence            45688999999999999999985 5688999999975421        12345788999999999999999999999999


Q ss_pred             eeEEEEEccCCC-ChhHHhhcCC
Q 017984          339 ESLLVYEFVPNQ-SLLDNLFDKM  360 (363)
Q Consensus       339 ~~~lv~Ey~~~g-sL~~~l~~~~  360 (363)
                      ..++||||+.+| +|.+++....
T Consensus       103 ~~~lv~e~~~~g~~l~~~~~~~~  125 (335)
T 3dls_A          103 FFQLVMEKHGSGLDLFAFIDRHP  125 (335)
T ss_dssp             EEEEEEECCTTSCBHHHHHHTCC
T ss_pred             EEEEEEEeCCCCccHHHHHHhcC
Confidence            999999999777 9999987654

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.21  E-value=2.7e-11  Score=109.08  Aligned_cols=90  Identities=31%  Similarity=0.479  Sum_probs=76.4

Q ss_pred             hccCCCcCceecccCceEEEEEEcCCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEE
Q 017984          267 ATNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVY  344 (363)
Q Consensus       267 ~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  344 (363)
                      ..++|...+.||+|+||.||++...  ..+|+|+++..  .....+.|.+|+.++.+++||||++++++. .....++||
T Consensus        22 ~~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~   98 (289)
T 3og7_A           22 PDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVT   98 (289)
T ss_dssp             CTTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEE
T ss_pred             CccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEE
Confidence            4567889999999999999999874  35999999753  445567899999999999999999999965 556789999


Q ss_pred             EccCCCChhHHhhcC
Q 017984          345 EFVPNQSLLDNLFDK  359 (363)
Q Consensus       345 Ey~~~gsL~~~l~~~  359 (363)
                      ||+++++|.+++...
T Consensus        99 e~~~~~~L~~~l~~~  113 (289)
T 3og7_A           99 QWCEGSSLYHHLHAS  113 (289)
T ss_dssp             ECCCEEEHHHHHTTC
T ss_pred             EecCCCcHHHHHhhc
Confidence            999999999998644

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.21  E-value=2.9e-11  Score=113.88  Aligned_cols=91  Identities=22%  Similarity=0.311  Sum_probs=79.3

Q ss_pred             cCCCcCceecccCceEEEEEEcCCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCC--CCCccceeeEEEeCCeeEEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGIN--HKNLVKLLGCSITGPESLLVY  344 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~lv~  344 (363)
                      ..|...+.||+|+||.||++...+++.||||++...  .....+.|.+|+.+|.+++  ||||+++++++...+.++|||
T Consensus        56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~  135 (390)
T 2zmd_A           56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM  135 (390)
T ss_dssp             EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence            458889999999999999999877999999999753  4455678999999999996  599999999999999999999


Q ss_pred             EccCCCChhHHhhcCC
Q 017984          345 EFVPNQSLLDNLFDKM  360 (363)
Q Consensus       345 Ey~~~gsL~~~l~~~~  360 (363)
                      | +.+++|.++|....
T Consensus       136 E-~~~~~L~~~l~~~~  150 (390)
T 2zmd_A          136 E-CGNIDLNSWLKKKK  150 (390)
T ss_dssp             E-CCSEEHHHHHHHCS
T ss_pred             e-cCCCCHHHHHHhcC
Confidence            9 56889999987653

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.21  E-value=1.4e-11  Score=110.24  Aligned_cols=88  Identities=28%  Similarity=0.442  Sum_probs=75.2

Q ss_pred             ccCCCcCceecccCceEEEEEEcCCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeC-CeeEEEEEc
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITG-PESLLVYEF  346 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-~~~~lv~Ey  346 (363)
                      .++|...+.||+|+||.||++... |+.||||+++...  ..+.|.+|+.++.+++||||+++++++... +..++||||
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~   96 (278)
T 1byg_A           20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY   96 (278)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred             hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEec
Confidence            456888999999999999999875 8899999997543  356799999999999999999999987654 478999999


Q ss_pred             cCCCChhHHhhc
Q 017984          347 VPNQSLLDNLFD  358 (363)
Q Consensus       347 ~~~gsL~~~l~~  358 (363)
                      +++|+|.+++..
T Consensus        97 ~~~~~L~~~l~~  108 (278)
T 1byg_A           97 MAKGSLVDYLRS  108 (278)
T ss_dssp             CTTEEHHHHHHH
T ss_pred             CCCCCHHHHHHh
Confidence            999999999865

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.20  E-value=4.1e-11  Score=109.99  Aligned_cols=93  Identities=26%  Similarity=0.459  Sum_probs=76.8

Q ss_pred             HHHhccCCCcCceecccCceEEEEEEcCCCCEEEEEEeccCChhhHHHHHHHHHHHhcC--CCCCccceeeEEEeC----
Q 017984          264 LEKATNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGI--NHKNLVKLLGCSITG----  337 (363)
Q Consensus       264 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l--~h~niv~l~~~~~~~----  337 (363)
                      .....++|...+.||+|+||.||++... ++.||||++...   ....+.+|.+++..+  +||||+++++++...    
T Consensus        32 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~  107 (337)
T 3mdy_A           32 QRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSW  107 (337)
T ss_dssp             HTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGG
T ss_pred             ccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCC
Confidence            3344567999999999999999999986 889999998643   234456666666655  899999999999887    


Q ss_pred             CeeEEEEEccCCCChhHHhhcCC
Q 017984          338 PESLLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       338 ~~~~lv~Ey~~~gsL~~~l~~~~  360 (363)
                      ...+|||||+++|+|.++|....
T Consensus       108 ~~~~lv~e~~~~g~L~~~l~~~~  130 (337)
T 3mdy_A          108 TQLYLITDYHENGSLYDYLKSTT  130 (337)
T ss_dssp             CEEEEEECCCTTCBHHHHHHHCC
T ss_pred             CceEEEEeccCCCcHHHHhhccC
Confidence            78999999999999999997654

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.20  E-value=2.4e-11  Score=111.44  Aligned_cols=98  Identities=15%  Similarity=0.253  Sum_probs=81.0

Q ss_pred             HHHHHhccCCCcC-ceecccCceEEEEEEc-CCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCC-CCCccceeeEEEe
Q 017984          262 ETLEKATNYFHES-NKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGIN-HKNLVKLLGCSIT  336 (363)
Q Consensus       262 ~~~~~~~~~~~~~-~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~  336 (363)
                      .......+.|... +.||+|+||.||++.. .+++.||+|++...  .......+.+|+.++..+. ||||+++++++..
T Consensus        21 ~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~  100 (327)
T 3lm5_A           21 QSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYEN  100 (327)
T ss_dssp             BCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEEC
T ss_pred             HHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEe
Confidence            3334444556665 7899999999999996 46899999999753  3344678999999999994 6999999999999


Q ss_pred             CCeeEEEEEccCCCChhHHhhcC
Q 017984          337 GPESLLVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       337 ~~~~~lv~Ey~~~gsL~~~l~~~  359 (363)
                      .+..++||||+++|+|.+++...
T Consensus       101 ~~~~~lv~e~~~~~~L~~~~~~~  123 (327)
T 3lm5_A          101 TSEIILILEYAAGGEIFSLCLPE  123 (327)
T ss_dssp             SSEEEEEEECCTTEEGGGGGSSC
T ss_pred             CCeEEEEEEecCCCcHHHHHHHh
Confidence            99999999999999999998653

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.20  E-value=2.2e-11  Score=111.74  Aligned_cols=91  Identities=29%  Similarity=0.512  Sum_probs=71.6

Q ss_pred             cCCCcCceecccCceEEEEEEc-CCCC----EEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL-PGGE----AVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLL  342 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~----~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  342 (363)
                      ++|...+.||+|+||.||++.+ .+++    .||+|.+... .....++|.+|+.++.+++||||+++++++.... .++
T Consensus        15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~   93 (327)
T 3poz_A           15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL   93 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEE
T ss_pred             HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEE
Confidence            4578889999999999999995 3444    4688888643 3345678999999999999999999999998754 789


Q ss_pred             EEEccCCCChhHHhhcCC
Q 017984          343 VYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       343 v~Ey~~~gsL~~~l~~~~  360 (363)
                      |+||+++|+|.+++....
T Consensus        94 v~e~~~~g~L~~~l~~~~  111 (327)
T 3poz_A           94 ITQLMPFGCLLDYVREHK  111 (327)
T ss_dssp             EEECCTTCBHHHHHHHST
T ss_pred             EEEecCCCcHHHHHHhcC
Confidence            999999999999997643

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.20  E-value=3.5e-11  Score=114.87  Aligned_cols=92  Identities=16%  Similarity=0.251  Sum_probs=79.2

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeC-----Ce
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITG-----PE  339 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~  339 (363)
                      .++|...+.||+|+||.||++.. .+++.||||++...  .....+.+.+|+.+|.+++||||+++++++...     ..
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~  104 (432)
T 3n9x_A           25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE  104 (432)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred             cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence            46788999999999999999996 45889999999753  444567899999999999999999999998776     57


Q ss_pred             eEEEEEccCCCChhHHhhcCC
Q 017984          340 SLLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       340 ~~lv~Ey~~~gsL~~~l~~~~  360 (363)
                      ++|||||++ |+|.+++....
T Consensus       105 ~~lv~e~~~-~~L~~~~~~~~  124 (432)
T 3n9x_A          105 LYIVLEIAD-SDLKKLFKTPI  124 (432)
T ss_dssp             EEEEEECCS-EEHHHHHHSSC
T ss_pred             EEEEEecCC-cCHHHHHhccC
Confidence            999999996 59999987654

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.20  E-value=3.2e-11  Score=109.85  Aligned_cols=90  Identities=24%  Similarity=0.217  Sum_probs=74.3

Q ss_pred             cCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccC--ChhhHHHHHHHHHHHhcC-CCCCccceeeEEEeCCeeEEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYN--TTQWVDHFFNEVNLISGI-NHKNLVKLLGCSITGPESLLVY  344 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~  344 (363)
                      ++|...++||+|+||.||++... +|+.||||++...  .......+..|+..+.++ +||||+++++++..++..+|||
T Consensus        57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~  136 (311)
T 3p1a_A           57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT  136 (311)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence            46888999999999999999974 6899999998653  333444566677666655 8999999999999999999999


Q ss_pred             EccCCCChhHHhhcC
Q 017984          345 EFVPNQSLLDNLFDK  359 (363)
Q Consensus       345 Ey~~~gsL~~~l~~~  359 (363)
                      ||+ +++|.+++...
T Consensus       137 e~~-~~~L~~~~~~~  150 (311)
T 3p1a_A          137 ELC-GPSLQQHCEAW  150 (311)
T ss_dssp             ECC-CCBHHHHHHHH
T ss_pred             ecc-CCCHHHHHHhc
Confidence            999 67999888653

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.20  E-value=2.4e-11  Score=116.87  Aligned_cols=92  Identities=18%  Similarity=0.298  Sum_probs=69.3

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeC-----Ce
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITG-----PE  339 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~  339 (363)
                      .++|...+.||+|+||.||++.. .+++.||||++...  .....+.+.+|+.+|.+++||||+++++++...     ..
T Consensus        52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  131 (458)
T 3rp9_A           52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE  131 (458)
T ss_dssp             CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred             CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence            46788999999999999999986 46899999999653  444567799999999999999999999998543     57


Q ss_pred             eEEEEEccCCCChhHHhhcCC
Q 017984          340 SLLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       340 ~~lv~Ey~~~gsL~~~l~~~~  360 (363)
                      +||||||+ +|+|.+++....
T Consensus       132 ~~lv~e~~-~~~L~~~~~~~~  151 (458)
T 3rp9_A          132 LYVVLEIA-DSDFKKLFRTPV  151 (458)
T ss_dssp             EEEEECCC-SEEHHHHHHSSC
T ss_pred             EEEEEecc-ccchhhhcccCC
Confidence            99999998 469999887654

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.19  E-value=2.5e-11  Score=108.74  Aligned_cols=92  Identities=26%  Similarity=0.347  Sum_probs=77.1

Q ss_pred             hccCCCcCceecccCceEEEEEEcCC----CCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeE
Q 017984          267 ATNYFHESNKLGQGGSGSVYKGTLPG----GEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESL  341 (363)
Q Consensus       267 ~~~~~~~~~~lg~G~~g~Vy~~~~~~----g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  341 (363)
                      ..++|...+.||+|+||.||++...+    +..||+|.+... .....+.|.+|+.++.+++||||+++++++.. +..+
T Consensus        10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~   88 (281)
T 3cc6_A           10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTW   88 (281)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCE
T ss_pred             cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCE
Confidence            34678889999999999999998532    346999999764 44556789999999999999999999998765 4578


Q ss_pred             EEEEccCCCChhHHhhcC
Q 017984          342 LVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       342 lv~Ey~~~gsL~~~l~~~  359 (363)
                      +||||+++++|.+++..+
T Consensus        89 ~v~e~~~~~~L~~~l~~~  106 (281)
T 3cc6_A           89 IIMELYPYGELGHYLERN  106 (281)
T ss_dssp             EEEECCTTCBHHHHHHHH
T ss_pred             EEEecCCCCCHHHHHHhc
Confidence            999999999999999754

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.19  E-value=2.3e-11  Score=112.56  Aligned_cols=94  Identities=21%  Similarity=0.323  Sum_probs=73.3

Q ss_pred             HhccCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccCCh-----hhHHHHHHHHHHHhcCCCCCccceeeEEEeCCe
Q 017984          266 KATNYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYNTT-----QWVDHFFNEVNLISGINHKNLVKLLGCSITGPE  339 (363)
Q Consensus       266 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  339 (363)
                      ...++|...+.||+|+||.||++... +|+.||||++.....     ...+.+.+|+.++..++||||+++++++...+.
T Consensus         7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   86 (346)
T 1ua2_A            7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN   86 (346)
T ss_dssp             ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred             HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence            34567889999999999999999974 589999999974321     112468899999999999999999999999999


Q ss_pred             eEEEEEccCCCChhHHhhcCC
Q 017984          340 SLLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       340 ~~lv~Ey~~~gsL~~~l~~~~  360 (363)
                      .++||||+++ +|.+++..+.
T Consensus        87 ~~lv~e~~~~-~l~~~~~~~~  106 (346)
T 1ua2_A           87 ISLVFDFMET-DLEVIIKDNS  106 (346)
T ss_dssp             CEEEEECCSE-EHHHHHTTCC
T ss_pred             eEEEEEcCCC-CHHHHHHhcC
Confidence            9999999986 8988887653

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.19  E-value=1.6e-11  Score=123.96  Aligned_cols=91  Identities=19%  Similarity=0.276  Sum_probs=75.8

Q ss_pred             ccCCCcCceecccCceEEEEEEcC--CCCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCe-----
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLP--GGEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPE-----  339 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~--~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-----  339 (363)
                      .++|...+.||+|+||.||++...  +|+.||||++... .......|.+|+.++.+++||||+++++++...+.     
T Consensus        79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~  158 (681)
T 2pzi_A           79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV  158 (681)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred             CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence            367889999999999999999964  5889999998653 44556679999999999999999999999987655     


Q ss_pred             eEEEEEccCCCChhHHhhc
Q 017984          340 SLLVYEFVPNQSLLDNLFD  358 (363)
Q Consensus       340 ~~lv~Ey~~~gsL~~~l~~  358 (363)
                      .||||||+++++|.+++..
T Consensus       159 ~~lv~E~~~g~~L~~~~~~  177 (681)
T 2pzi_A          159 GYIVMEYVGGQSLKRSKGQ  177 (681)
T ss_dssp             EEEEEECCCCEECC----C
T ss_pred             eEEEEEeCCCCcHHHHHhC
Confidence            7999999999999988754

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.19  E-value=2.1e-11  Score=113.81  Aligned_cols=93  Identities=22%  Similarity=0.392  Sum_probs=72.7

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCC------
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGP------  338 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------  338 (363)
                      .+.|...+.||+|+||.||++.. .+|+.||||++...  .....+.+.+|+.++..++||||+++++++....      
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  103 (367)
T 1cm8_A           24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT  103 (367)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred             cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence            46788899999999999999996 56899999999643  3444667999999999999999999999987653      


Q ss_pred             eeEEEEEccCCCChhHHhhcCCC
Q 017984          339 ESLLVYEFVPNQSLLDNLFDKML  361 (363)
Q Consensus       339 ~~~lv~Ey~~~gsL~~~l~~~~~  361 (363)
                      ..+|||||+ +++|.+++.....
T Consensus       104 ~~~lv~e~~-~~~L~~~~~~~~l  125 (367)
T 1cm8_A          104 DFYLVMPFM-GTDLGKLMKHEKL  125 (367)
T ss_dssp             CCEEEEECC-SEEHHHHHHHCCC
T ss_pred             eEEEEEecC-CCCHHHHHhcCCC
Confidence            469999999 8899999876543

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.19  E-value=2.1e-11  Score=113.65  Aligned_cols=90  Identities=18%  Similarity=0.218  Sum_probs=76.8

Q ss_pred             HhccCCCcCceecccCceEEEEEE------cCCCCEEEEEEeccCChhhHHHHHHHHHHHhcCC---CCCccceeeEEEe
Q 017984          266 KATNYFHESNKLGQGGSGSVYKGT------LPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGIN---HKNLVKLLGCSIT  336 (363)
Q Consensus       266 ~~~~~~~~~~~lg~G~~g~Vy~~~------~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~  336 (363)
                      ...+.|...+.||+|+||.||++.      ..+++.||||++....   ..++..|+.++..++   |+||+++++++..
T Consensus        62 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~  138 (365)
T 3e7e_A           62 LGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSAHLF  138 (365)
T ss_dssp             CSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEEEEC
T ss_pred             ECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhheeeec
Confidence            345678889999999999999994      3458899999997653   346788888888887   9999999999999


Q ss_pred             CCeeEEEEEccCCCChhHHhhc
Q 017984          337 GPESLLVYEFVPNQSLLDNLFD  358 (363)
Q Consensus       337 ~~~~~lv~Ey~~~gsL~~~l~~  358 (363)
                      .+..+|||||+++|+|.++|..
T Consensus       139 ~~~~~lv~e~~~~g~L~~~l~~  160 (365)
T 3e7e_A          139 QNGSVLVGELYSYGTLLNAINL  160 (365)
T ss_dssp             SSCEEEEECCCCSCBHHHHHHH
T ss_pred             CCCcEEEEeccCCCcHHHHHHH
Confidence            9999999999999999999963

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.18  E-value=4.8e-11  Score=108.05  Aligned_cols=90  Identities=20%  Similarity=0.200  Sum_probs=73.4

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC----ChhhHHHHHHHHHHHhcCCCCCccceeeEEE--eCCee
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN----TTQWVDHFFNEVNLISGINHKNLVKLLGCSI--TGPES  340 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~~  340 (363)
                      .++|...+.||+|+||.||++.. .+++.||+|++...    .....+.+.+|+.++.+++||||+++++++.  .....
T Consensus         4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   83 (305)
T 2wtk_C            4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM   83 (305)
T ss_dssp             -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred             ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence            46799999999999999999997 46889999999643    1234567999999999999999999999984  45688


Q ss_pred             EEEEEccCCCChhHHhhc
Q 017984          341 LLVYEFVPNQSLLDNLFD  358 (363)
Q Consensus       341 ~lv~Ey~~~gsL~~~l~~  358 (363)
                      ++||||++++ |.+++..
T Consensus        84 ~lv~e~~~~~-l~~~~~~  100 (305)
T 2wtk_C           84 YMVMEYCVCG-MQEMLDS  100 (305)
T ss_dssp             EEEEECCSEE-HHHHHHH
T ss_pred             EEEehhccCC-HHHHHHh
Confidence            9999999876 7776654

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.18  E-value=1.1e-11  Score=113.54  Aligned_cols=90  Identities=28%  Similarity=0.375  Sum_probs=74.8

Q ss_pred             cCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccCChh-hHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEc
Q 017984          269 NYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYNTTQ-WVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      ++|...+.||+|+||.||++... +++.||+|++...... ....+.+|+.++.+++||||+++++++...+..+|||||
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   81 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence            46888899999999999999974 6899999999754221 122466899999999999999999999999999999999


Q ss_pred             cCCCChhHHhhcC
Q 017984          347 VPNQSLLDNLFDK  359 (363)
Q Consensus       347 ~~~gsL~~~l~~~  359 (363)
                      ++ |+|.+++...
T Consensus        82 ~~-~~l~~~~~~~   93 (324)
T 3mtl_A           82 LD-KDLKQYLDDC   93 (324)
T ss_dssp             CS-EEHHHHHHHT
T ss_pred             cc-cCHHHHHHhc
Confidence            97 5999988754

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.18  E-value=2.5e-11  Score=111.48  Aligned_cols=88  Identities=19%  Similarity=0.181  Sum_probs=76.6

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcC-CCCCccceeeEEEeCCeeEEEEE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGI-NHKNLVKLLGCSITGPESLLVYE  345 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E  345 (363)
                      .++|...+.||+|+||.||++.. .+++.||||++.....  .+.+.+|+.++.++ +||||+++++++...+..+||||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e   85 (330)
T 2izr_A            8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE   85 (330)
T ss_dssp             TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred             cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence            35788899999999999999995 5689999999875432  23588999999999 89999999999999999999999


Q ss_pred             ccCCCChhHHhhc
Q 017984          346 FVPNQSLLDNLFD  358 (363)
Q Consensus       346 y~~~gsL~~~l~~  358 (363)
                      |+ +++|.+++..
T Consensus        86 ~~-~~~L~~~~~~   97 (330)
T 2izr_A           86 LL-GPSLEDLFDL   97 (330)
T ss_dssp             CC-CCBHHHHHHH
T ss_pred             eC-CCCHHHHHHH
Confidence            99 9999999875

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.18  E-value=4.2e-11  Score=112.55  Aligned_cols=94  Identities=27%  Similarity=0.465  Sum_probs=71.9

Q ss_pred             hccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCC-CCCccceeeEEEeCC--ee
Q 017984          267 ATNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGIN-HKNLVKLLGCSITGP--ES  340 (363)
Q Consensus       267 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~--~~  340 (363)
                      ..++|...+.||+|+||.||++.. .+|+.||||++...  .......+.+|+.++..+. ||||+++++++...+  .+
T Consensus         7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~   86 (388)
T 3oz6_A            7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV   86 (388)
T ss_dssp             HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred             ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence            356788999999999999999986 56899999999643  4455677899999999997 999999999997644  78


Q ss_pred             EEEEEccCCCChhHHhhcCCC
Q 017984          341 LLVYEFVPNQSLLDNLFDKML  361 (363)
Q Consensus       341 ~lv~Ey~~~gsL~~~l~~~~~  361 (363)
                      +||||||+ |+|.+++..+..
T Consensus        87 ~lv~e~~~-~~L~~~~~~~~~  106 (388)
T 3oz6_A           87 YLVFDYME-TDLHAVIRANIL  106 (388)
T ss_dssp             EEEEECCS-EEHHHHHHHTCC
T ss_pred             EEEecccC-cCHHHHHHcCCC
Confidence            99999997 599998876543

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.17  E-value=6e-11  Score=108.68  Aligned_cols=87  Identities=21%  Similarity=0.281  Sum_probs=76.3

Q ss_pred             cCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcCC-CCCccceeeEEEe--CCeeEEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGIN-HKNLVKLLGCSIT--GPESLLVY  344 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~--~~~~~lv~  344 (363)
                      ++|...+.||+|+||.||++.. .+++.||||++....   .+.+.+|+.++.+++ ||||+++++++..  ....++||
T Consensus        36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~  112 (330)
T 3nsz_A           36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF  112 (330)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred             CceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc---hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence            5688899999999999999985 568999999997543   356899999999997 9999999999987  66789999


Q ss_pred             EccCCCChhHHhhc
Q 017984          345 EFVPNQSLLDNLFD  358 (363)
Q Consensus       345 Ey~~~gsL~~~l~~  358 (363)
                      ||+++++|.+++..
T Consensus       113 e~~~~~~l~~~~~~  126 (330)
T 3nsz_A          113 EHVNNTDFKQLYQT  126 (330)
T ss_dssp             ECCCCCCHHHHGGG
T ss_pred             eccCchhHHHHHHh
Confidence            99999999988753

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.15  E-value=3.3e-11  Score=121.25  Aligned_cols=93  Identities=23%  Similarity=0.179  Sum_probs=79.6

Q ss_pred             hccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC---ChhhHHHHHHHHHHHhcC-CCCCccceeeEEEeCCeeE
Q 017984          267 ATNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN---TTQWVDHFFNEVNLISGI-NHKNLVKLLGCSITGPESL  341 (363)
Q Consensus       267 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~  341 (363)
                      ..++|...+.||+|+||.||++.. .+++.||||+++..   .....+.+..|..++..+ +||||+++++++.+.+.+|
T Consensus       339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~  418 (674)
T 3pfq_A          339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY  418 (674)
T ss_dssp             -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred             cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence            456788999999999999999996 45889999999742   223345688999999988 7999999999999999999


Q ss_pred             EEEEccCCCChhHHhhcC
Q 017984          342 LVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       342 lv~Ey~~~gsL~~~l~~~  359 (363)
                      |||||+++|+|.++|...
T Consensus       419 lV~E~~~gg~L~~~l~~~  436 (674)
T 3pfq_A          419 FVMEYVNGGDLMYHIQQV  436 (674)
T ss_dssp             EEEECCCSCBHHHHHHHH
T ss_pred             EEEeCcCCCcHHHHHHhc
Confidence            999999999999999763

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.15  E-value=7.1e-11  Score=109.27  Aligned_cols=94  Identities=22%  Similarity=0.385  Sum_probs=79.0

Q ss_pred             hccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeC-----Ce
Q 017984          267 ATNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITG-----PE  339 (363)
Q Consensus       267 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~  339 (363)
                      ..++|...+.||+|+||.||++.. .+|+.||||++... .......+.+|+.++.+++||||+++++++...     ..
T Consensus         9 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   88 (353)
T 2b9h_A            9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNE   88 (353)
T ss_dssp             SCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCC
T ss_pred             cccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccce
Confidence            356788999999999999999996 46889999999754 344456789999999999999999999987754     67


Q ss_pred             eEEEEEccCCCChhHHhhcCCC
Q 017984          340 SLLVYEFVPNQSLLDNLFDKML  361 (363)
Q Consensus       340 ~~lv~Ey~~~gsL~~~l~~~~~  361 (363)
                      .++||||++ |+|.+++.....
T Consensus        89 ~~lv~e~~~-~~L~~~~~~~~~  109 (353)
T 2b9h_A           89 VYIIQELMQ-TDLHRVISTQML  109 (353)
T ss_dssp             EEEEECCCS-EEHHHHHHHCCC
T ss_pred             EEEEEeccC-ccHHHHHhhcCC
Confidence            899999997 599998876543

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.14  E-value=1.9e-11  Score=114.56  Aligned_cols=91  Identities=16%  Similarity=0.204  Sum_probs=73.3

Q ss_pred             hccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC---ChhhHHHHHHHH---HHHhcCCCCCcccee-------e
Q 017984          267 ATNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN---TTQWVDHFFNEV---NLISGINHKNLVKLL-------G  332 (363)
Q Consensus       267 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~---~~l~~l~h~niv~l~-------~  332 (363)
                      ..++|...+.||+|+||.||++.. .+|+.||||++...   .....+.|.+|+   .++.+++|||||+++       +
T Consensus        71 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~  150 (377)
T 3byv_A           71 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD  150 (377)
T ss_dssp             CCEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSE
T ss_pred             CCceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhh
Confidence            456788899999999999999996 56899999999742   344567899999   556666899999998       5


Q ss_pred             EEEeCC-----------------eeEEEEEccCCCChhHHhhc
Q 017984          333 CSITGP-----------------ESLLVYEFVPNQSLLDNLFD  358 (363)
Q Consensus       333 ~~~~~~-----------------~~~lv~Ey~~~gsL~~~l~~  358 (363)
                      ++...+                 ..+|||||+ +|+|.++|..
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~  192 (377)
T 3byv_A          151 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEV  192 (377)
T ss_dssp             EEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHH
T ss_pred             hhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHh
Confidence            555443                 288999999 6899999875

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.14  E-value=4.6e-11  Score=112.09  Aligned_cols=88  Identities=23%  Similarity=0.346  Sum_probs=70.0

Q ss_pred             HHhccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeC------
Q 017984          265 EKATNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITG------  337 (363)
Q Consensus       265 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------  337 (363)
                      ....++|...+.||+|+||.||++.. .+|+.||||++......    ..+|+.+|+.++||||+++++++...      
T Consensus         3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~----~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~   78 (383)
T 3eb0_A            3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY----KNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK   78 (383)
T ss_dssp             ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS----CCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred             ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch----HHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence            34567899999999999999999986 57899999999754322    34799999999999999999998543      


Q ss_pred             --------------------------------CeeEEEEEccCCCChhHHhh
Q 017984          338 --------------------------------PESLLVYEFVPNQSLLDNLF  357 (363)
Q Consensus       338 --------------------------------~~~~lv~Ey~~~gsL~~~l~  357 (363)
                                                      ..++|||||++ |+|.+.|.
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~  129 (383)
T 3eb0_A           79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLK  129 (383)
T ss_dssp             -------------------------------CCEEEEEECCCS-EEHHHHHH
T ss_pred             ccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHH
Confidence                                            34889999998 48877765

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.14  E-value=8.2e-11  Score=111.12  Aligned_cols=86  Identities=21%  Similarity=0.199  Sum_probs=70.9

Q ss_pred             cCCCcC-ceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHh-cCCCCCccceeeEEEe----CCeeE
Q 017984          269 NYFHES-NKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLIS-GINHKNLVKLLGCSIT----GPESL  341 (363)
Q Consensus       269 ~~~~~~-~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~-~l~h~niv~l~~~~~~----~~~~~  341 (363)
                      ++|... +.||+|+||.||++.. .+++.||||++...     ..+.+|+.++. ..+||||+++++++..    ...++
T Consensus        61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~  135 (400)
T 1nxk_A           61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL  135 (400)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred             ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEE
Confidence            345554 6899999999999996 46899999999642     34678888874 4589999999999876    56789


Q ss_pred             EEEEccCCCChhHHhhcC
Q 017984          342 LVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       342 lv~Ey~~~gsL~~~l~~~  359 (363)
                      |||||+++|+|.++|.+.
T Consensus       136 lv~E~~~gg~L~~~l~~~  153 (400)
T 1nxk_A          136 IVMECLDGGELFSRIQDR  153 (400)
T ss_dssp             EEEECCCSEEHHHHHHCC
T ss_pred             EEEEeCCCCcHHHHHHHh
Confidence            999999999999999864

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.14  E-value=7.4e-11  Score=118.36  Aligned_cols=94  Identities=20%  Similarity=0.240  Sum_probs=78.4

Q ss_pred             HhccCCCcCceecccCceEEEEEEcC----CCCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCee
Q 017984          266 KATNYFHESNKLGQGGSGSVYKGTLP----GGEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPES  340 (363)
Q Consensus       266 ~~~~~~~~~~~lg~G~~g~Vy~~~~~----~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  340 (363)
                      ...++|...+.||+|+||.||+|.+.    .+..||+|.+... .....+.|.+|+.++.+++||||+++++++. ++..
T Consensus       387 i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~  465 (656)
T 2j0j_A          387 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPV  465 (656)
T ss_dssp             CCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSC
T ss_pred             cccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCce
Confidence            34566778889999999999999863    2457999998754 4445578999999999999999999999884 4678


Q ss_pred             EEEEEccCCCChhHHhhcCC
Q 017984          341 LLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       341 ~lv~Ey~~~gsL~~~l~~~~  360 (363)
                      +|||||+++|+|.++|..+.
T Consensus       466 ~lv~E~~~~g~L~~~l~~~~  485 (656)
T 2j0j_A          466 WIIMELCTLGELRSFLQVRK  485 (656)
T ss_dssp             EEEEECCTTCBHHHHHHHTT
T ss_pred             EEEEEcCCCCcHHHHHHhcc
Confidence            99999999999999997543

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.14  E-value=1.2e-10  Score=105.32  Aligned_cols=87  Identities=21%  Similarity=0.195  Sum_probs=72.8

Q ss_pred             cCCCcC-ceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHH-hcCCCCCccceeeEEEe----CCeeE
Q 017984          269 NYFHES-NKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLI-SGINHKNLVKLLGCSIT----GPESL  341 (363)
Q Consensus       269 ~~~~~~-~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l-~~l~h~niv~l~~~~~~----~~~~~  341 (363)
                      ++|... +.||+|+||.||++.. .+++.||+|++...     ..+.+|+.++ ..++||||+++++++..    ....+
T Consensus        17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~   91 (299)
T 3m2w_A           17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL   91 (299)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred             cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEE
Confidence            445555 7899999999999996 56899999999642     3477888888 56689999999999887    67899


Q ss_pred             EEEEccCCCChhHHhhcCC
Q 017984          342 LVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       342 lv~Ey~~~gsL~~~l~~~~  360 (363)
                      |||||+++|+|.+++....
T Consensus        92 lv~e~~~~~~L~~~l~~~~  110 (299)
T 3m2w_A           92 IVMECLDGGELFSRIQDRG  110 (299)
T ss_dssp             EEECCCCSCBHHHHHHHCT
T ss_pred             EEEeecCCCcHHHHHHhcc
Confidence            9999999999999997653

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.14  E-value=3.1e-11  Score=110.66  Aligned_cols=90  Identities=30%  Similarity=0.447  Sum_probs=73.6

Q ss_pred             cCCCcCceecccCceEEEEEEc-CCCC----EEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL-PGGE----AVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLL  342 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~----~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  342 (363)
                      ++|...+.||+|+||.||++.. .+++    .||+|.+... .......+.+|+.++.+++||||+++++++. ++..++
T Consensus        13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~   91 (325)
T 3kex_A           13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL   91 (325)
T ss_dssp             TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred             hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence            4677889999999999999996 3444    3888887543 2233456889999999999999999999886 467899


Q ss_pred             EEEccCCCChhHHhhcC
Q 017984          343 VYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       343 v~Ey~~~gsL~~~l~~~  359 (363)
                      ||||+++|+|.+++..+
T Consensus        92 v~e~~~~~~L~~~l~~~  108 (325)
T 3kex_A           92 VTQYLPLGSLLDHVRQH  108 (325)
T ss_dssp             EEECCTTCBSHHHHHSS
T ss_pred             EEEeCCCCCHHHHHHHc
Confidence            99999999999999764

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.13  E-value=1.1e-10  Score=108.80  Aligned_cols=94  Identities=15%  Similarity=0.233  Sum_probs=79.1

Q ss_pred             hccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeC-----Ce
Q 017984          267 ATNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITG-----PE  339 (363)
Q Consensus       267 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~  339 (363)
                      ..++|...+.||+|+||.||++.. .+++.||||++... .....+.+.+|+.++.+++||||+++++++...     ..
T Consensus        25 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~  104 (364)
T 3qyz_A           25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD  104 (364)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred             ccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccce
Confidence            356788999999999999999986 46889999999753 344457799999999999999999999998764     46


Q ss_pred             eEEEEEccCCCChhHHhhcCCC
Q 017984          340 SLLVYEFVPNQSLLDNLFDKML  361 (363)
Q Consensus       340 ~~lv~Ey~~~gsL~~~l~~~~~  361 (363)
                      .++||||++ |+|.+++.....
T Consensus       105 ~~iv~e~~~-~~L~~~l~~~~~  125 (364)
T 3qyz_A          105 VYIVQDLME-TDLYKLLKTQHL  125 (364)
T ss_dssp             EEEEEECCS-EEHHHHHHHCCC
T ss_pred             EEEEEcccC-cCHHHHHHhCCC
Confidence            899999997 599998876543

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.13  E-value=5.8e-11  Score=108.83  Aligned_cols=91  Identities=24%  Similarity=0.323  Sum_probs=77.5

Q ss_pred             hccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcCC-CCCccceeeEEE--------e
Q 017984          267 ATNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGIN-HKNLVKLLGCSI--------T  336 (363)
Q Consensus       267 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~--------~  336 (363)
                      ...+|...+.||+|+||.||++.. .+++.||||++........+.+.+|+.++.++. ||||+++++++.        .
T Consensus        26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~  105 (337)
T 3ll6_A           26 GELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTG  105 (337)
T ss_dssp             TTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTS
T ss_pred             cCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccC
Confidence            345688899999999999999996 468999999997776666778999999999996 999999999984        3


Q ss_pred             CCeeEEEEEccCCCChhHHhhc
Q 017984          337 GPESLLVYEFVPNQSLLDNLFD  358 (363)
Q Consensus       337 ~~~~~lv~Ey~~~gsL~~~l~~  358 (363)
                      ....++||||++ |+|.+++..
T Consensus       106 ~~~~~lv~e~~~-g~L~~~l~~  126 (337)
T 3ll6_A          106 QAEFLLLTELCK-GQLVEFLKK  126 (337)
T ss_dssp             SEEEEEEEECCS-EEHHHHHHH
T ss_pred             CceEEEEEEecC-CCHHHHHHH
Confidence            345899999996 699998864

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.13  E-value=3e-11  Score=109.93  Aligned_cols=98  Identities=20%  Similarity=0.299  Sum_probs=83.1

Q ss_pred             HHHHHhccCCCcCceecccCceEEEEEEcCCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCC--CCCccceeeEEEeC
Q 017984          262 ETLEKATNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGIN--HKNLVKLLGCSITG  337 (363)
Q Consensus       262 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~  337 (363)
                      +.+....++|...+.||+|+||.||++...+++.||||++...  .....+.+.+|+.++.+++  ||||+++++++...
T Consensus        21 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~  100 (313)
T 3cek_A           21 QSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITD  100 (313)
T ss_dssp             CEEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECS
T ss_pred             eeeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecC
Confidence            3344455678899999999999999999888999999999743  4455678999999999997  59999999999999


Q ss_pred             CeeEEEEEccCCCChhHHhhcCC
Q 017984          338 PESLLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       338 ~~~~lv~Ey~~~gsL~~~l~~~~  360 (363)
                      +..+|||| +.+++|.+++..+.
T Consensus       101 ~~~~lv~e-~~~~~L~~~l~~~~  122 (313)
T 3cek_A          101 QYIYMVME-CGNIDLNSWLKKKK  122 (313)
T ss_dssp             SEEEEEEC-CCSEEHHHHHHHCS
T ss_pred             CEEEEEEe-cCCCcHHHHHHhcC
Confidence            99999999 56889999987643

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.13  E-value=6.8e-11  Score=113.86  Aligned_cols=90  Identities=22%  Similarity=0.317  Sum_probs=75.2

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeC------C
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITG------P  338 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~  338 (363)
                      .++|...+.||+|+||.||++.. .+++.||||++...  .....+.+.+|+.+++.++||||+++++++...      .
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  140 (464)
T 3ttj_A           61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ  140 (464)
T ss_dssp             ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred             cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence            56788999999999999999985 46889999999753  445567799999999999999999999998654      4


Q ss_pred             eeEEEEEccCCCChhHHhhc
Q 017984          339 ESLLVYEFVPNQSLLDNLFD  358 (363)
Q Consensus       339 ~~~lv~Ey~~~gsL~~~l~~  358 (363)
                      ..+|||||+++ +|.+.+..
T Consensus       141 ~~~lv~E~~~~-~l~~~~~~  159 (464)
T 3ttj_A          141 DVYLVMELMDA-NLCQVIQM  159 (464)
T ss_dssp             EEEEEEECCSE-EHHHHHTS
T ss_pred             eEEEEEeCCCC-CHHHHHhh
Confidence            67999999976 56666543

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.12  E-value=1.5e-10  Score=108.19  Aligned_cols=90  Identities=21%  Similarity=0.300  Sum_probs=76.4

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCC------
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGP------  338 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------  338 (363)
                      .++|...+.||+|+||.||++.. .+++.||||++...  .....+.+.+|+.+++.++||||+++++++...+      
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~  103 (371)
T 2xrw_A           24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ  103 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred             hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence            46788999999999999999986 46889999999753  3445567999999999999999999999987654      


Q ss_pred             eeEEEEEccCCCChhHHhhc
Q 017984          339 ESLLVYEFVPNQSLLDNLFD  358 (363)
Q Consensus       339 ~~~lv~Ey~~~gsL~~~l~~  358 (363)
                      ..+|||||+++ +|.+++..
T Consensus       104 ~~~lv~e~~~~-~l~~~~~~  122 (371)
T 2xrw_A          104 DVYIVMELMDA-NLCQVIQM  122 (371)
T ss_dssp             EEEEEEECCSE-EHHHHHHS
T ss_pred             ceEEEEEcCCC-CHHHHHhh
Confidence            78999999975 78887753

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.12  E-value=6.8e-11  Score=110.38  Aligned_cols=93  Identities=23%  Similarity=0.314  Sum_probs=70.6

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeC------C
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITG------P  338 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~  338 (363)
                      .++|...+.||+|+||.||++.. .+|+.||||++...  .....+.+.+|+.+++.++||||+++++++...      .
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~  107 (367)
T 2fst_X           28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN  107 (367)
T ss_dssp             ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred             CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence            46788999999999999999985 56899999999653  344566789999999999999999999998754      5


Q ss_pred             eeEEEEEccCCCChhHHhhcCCC
Q 017984          339 ESLLVYEFVPNQSLLDNLFDKML  361 (363)
Q Consensus       339 ~~~lv~Ey~~~gsL~~~l~~~~~  361 (363)
                      ..++|+||+ +++|.+++....+
T Consensus       108 ~~~lv~e~~-~~~L~~~~~~~~l  129 (367)
T 2fst_X          108 DVYLVTHLM-GADLNNIVKCQKL  129 (367)
T ss_dssp             CCEEEEECC-CEECC-----CCC
T ss_pred             eEEEEeccc-CCCHHHHHhcCCC
Confidence            689999999 6899998876543

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.12  E-value=1e-10  Score=107.30  Aligned_cols=91  Identities=29%  Similarity=0.517  Sum_probs=75.8

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCC----EEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGE----AVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESL  341 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~----~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  341 (363)
                      .++|...+.||+|+||.||++.. .+++    .|++|.+... .....+.+.+|+.++.+++||||+++++++.... .+
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~   92 (327)
T 3lzb_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ   92 (327)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred             HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence            35688899999999999999995 3444    4678877543 3445678999999999999999999999998764 78


Q ss_pred             EEEEccCCCChhHHhhcC
Q 017984          342 LVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       342 lv~Ey~~~gsL~~~l~~~  359 (363)
                      +|+||+++|+|.+++...
T Consensus        93 ~v~~~~~~g~L~~~l~~~  110 (327)
T 3lzb_A           93 LITQLMPFGCLLDYVREH  110 (327)
T ss_dssp             EEECCCSSCBHHHHHHHT
T ss_pred             EEEEecCCCcHHHHHHhc
Confidence            999999999999999764

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.12  E-value=5.3e-11  Score=106.90  Aligned_cols=90  Identities=38%  Similarity=0.587  Sum_probs=69.0

Q ss_pred             ccCCCcCceecccCceEEEEEEc--CCCC--EEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCee
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL--PGGE--AVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPES  340 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~--~~g~--~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  340 (363)
                      .++|...+.||+|+||.||++.+  .+++  .||||+++..   .....+.|.+|+.++.+++||||+++++++..+. .
T Consensus        17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~   95 (291)
T 1u46_A           17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M   95 (291)
T ss_dssp             GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred             hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence            35688889999999999999985  2333  6899998753   3345678999999999999999999999988765 8


Q ss_pred             EEEEEccCCCChhHHhhc
Q 017984          341 LLVYEFVPNQSLLDNLFD  358 (363)
Q Consensus       341 ~lv~Ey~~~gsL~~~l~~  358 (363)
                      ++||||+++|+|.+++..
T Consensus        96 ~~v~e~~~~~~L~~~l~~  113 (291)
T 1u46_A           96 KMVTELAPLGSLLDRLRK  113 (291)
T ss_dssp             EEEEECCTTCBHHHHHHH
T ss_pred             eeeEecccCCCHHHHHHh
Confidence            899999999999999875

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.11  E-value=2.1e-10  Score=104.99  Aligned_cols=89  Identities=18%  Similarity=0.319  Sum_probs=73.9

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC-ChhhHHHHHHHHH-HHhcCCCCCccceeeEEEeCCeeEEEE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN-TTQWVDHFFNEVN-LISGINHKNLVKLLGCSITGPESLLVY  344 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~-~~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~  344 (363)
                      .++|...+.||+|+||.||++.. .+|+.||||++... ......++..|+. +++.++||||+++++++...+..+|||
T Consensus        21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~  100 (327)
T 3aln_A           21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM  100 (327)
T ss_dssp             SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence            46788899999999999999997 46899999999764 3344456667776 777889999999999999999999999


Q ss_pred             EccCCCChhHHhh
Q 017984          345 EFVPNQSLLDNLF  357 (363)
Q Consensus       345 Ey~~~gsL~~~l~  357 (363)
                      ||+++ +|.+++.
T Consensus       101 e~~~~-~l~~~~~  112 (327)
T 3aln_A          101 ELMST-SFDKFYK  112 (327)
T ss_dssp             CCCSE-EHHHHHH
T ss_pred             eecCC-ChHHHHH
Confidence            99985 8887775

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.11  E-value=1.3e-10  Score=104.30  Aligned_cols=90  Identities=20%  Similarity=0.215  Sum_probs=72.3

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC-Chhh-HHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN-TTQW-VDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVY  344 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~-~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  344 (363)
                      .++|...+.||+|+||.||++.. .+|+.||+|++... .... .+.+..+...+..++||||+++++++..++..++||
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~   85 (290)
T 3fme_A            6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM   85 (290)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred             HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence            46788899999999999999996 56899999999754 2222 333455556688889999999999999999999999


Q ss_pred             EccCCCChhHHhhc
Q 017984          345 EFVPNQSLLDNLFD  358 (363)
Q Consensus       345 Ey~~~gsL~~~l~~  358 (363)
                      ||+++ +|.+++..
T Consensus        86 e~~~~-~l~~~l~~   98 (290)
T 3fme_A           86 ELMDT-SLDKFYKQ   98 (290)
T ss_dssp             ECCSE-EHHHHHHH
T ss_pred             ehhcc-chHHHHHH
Confidence            99974 88877753

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.10  E-value=9.9e-12  Score=113.34  Aligned_cols=99  Identities=19%  Similarity=0.331  Sum_probs=83.1

Q ss_pred             chHHHHHhccCCCcCceecccCceEEEEEEcCCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeC
Q 017984          260 SYETLEKATNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITG  337 (363)
Q Consensus       260 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~  337 (363)
                      ...++....++|...+.||+|+||.||++...+  .+|+|.+...  .....+.|.+|+.++.+++||||+++++++...
T Consensus        24 ~~~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~  101 (319)
T 2y4i_B           24 FLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSP  101 (319)
T ss_dssp             CGGGSSSCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECS
T ss_pred             ccccccCCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecC
Confidence            344555567889999999999999999998753  4999998743  223345688999999999999999999999999


Q ss_pred             CeeEEEEEccCCCChhHHhhcCC
Q 017984          338 PESLLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       338 ~~~~lv~Ey~~~gsL~~~l~~~~  360 (363)
                      +..++||||+++++|.+++.+..
T Consensus       102 ~~~~iv~e~~~~~~L~~~l~~~~  124 (319)
T 2y4i_B          102 PHLAIITSLCKGRTLYSVVRDAK  124 (319)
T ss_dssp             SCEEEECBCCCSEEHHHHTTSSC
T ss_pred             CceEEEeecccCCcHHHHHHhcC
Confidence            99999999999999999998654

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.10  E-value=2.2e-11  Score=121.18  Aligned_cols=93  Identities=23%  Similarity=0.287  Sum_probs=78.1

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEe------CCe
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSIT------GPE  339 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~~~  339 (363)
                      .++|...+.||+|+||.||++.. .+|+.||||++... .....+.|.+|+.++.+++||||+++++++..      .+.
T Consensus        13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~   92 (676)
T 3qa8_A           13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL   92 (676)
T ss_dssp             ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred             CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence            36799999999999999999986 46889999998754 45556779999999999999999999998755      667


Q ss_pred             eEEEEEccCCCChhHHhhcCC
Q 017984          340 SLLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       340 ~~lv~Ey~~~gsL~~~l~~~~  360 (363)
                      .+|||||+++|+|.+++....
T Consensus        93 ~~LVmEy~~ggsL~~~L~~~~  113 (676)
T 3qa8_A           93 PLLAMEYCEGGDLRKYLNQFE  113 (676)
T ss_dssp             CCCEEECCSSCBHHHHHHSSS
T ss_pred             EEEEEEeCCCCCHHHHHHhcc
Confidence            899999999999999998643

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.10  E-value=1.1e-10  Score=107.91  Aligned_cols=91  Identities=24%  Similarity=0.419  Sum_probs=75.0

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEe--------
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSIT--------  336 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--------  336 (363)
                      .++|...+.||+|+||.||++.. .+|+.||||++...  .......+.+|+.++..++||||+++++++..        
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   95 (351)
T 3mi9_A           16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC   95 (351)
T ss_dssp             GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred             ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence            35688899999999999999997 56899999998643  22334568899999999999999999999887        


Q ss_pred             CCeeEEEEEccCCCChhHHhhcC
Q 017984          337 GPESLLVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       337 ~~~~~lv~Ey~~~gsL~~~l~~~  359 (363)
                      .+..+|||||+++ +|.+.+...
T Consensus        96 ~~~~~lv~e~~~~-~l~~~l~~~  117 (351)
T 3mi9_A           96 KGSIYLVFDFCEH-DLAGLLSNV  117 (351)
T ss_dssp             -CEEEEEEECCSE-EHHHHHHCT
T ss_pred             CceEEEEEeccCC-CHHHHHhhc
Confidence            4468999999975 777777653

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.10  E-value=6.5e-11  Score=108.73  Aligned_cols=90  Identities=31%  Similarity=0.443  Sum_probs=70.8

Q ss_pred             ccCCCcCceecccCceEEEEEEcCCCCEEEEEEeccCChhhHHHHHHHHHHH--hcCCCCCccceeeEEEe-----CCee
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLI--SGINHKNLVKLLGCSIT-----GPES  340 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l--~~l~h~niv~l~~~~~~-----~~~~  340 (363)
                      .++|...+.||+|+||.||++.. +++.||||++....   ...+..|.+++  ..++||||+++++.+..     ....
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~   87 (336)
T 3g2f_A           12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEY   87 (336)
T ss_dssp             TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred             hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceE
Confidence            46788899999999999999987 58899999996432   33455555554  45899999999986543     2367


Q ss_pred             EEEEEccCCCChhHHhhcCCC
Q 017984          341 LLVYEFVPNQSLLDNLFDKML  361 (363)
Q Consensus       341 ~lv~Ey~~~gsL~~~l~~~~~  361 (363)
                      +|||||+++|+|.++|.....
T Consensus        88 ~lv~e~~~~g~L~~~l~~~~~  108 (336)
T 3g2f_A           88 LLVMEYYPNGSLXKYLSLHTS  108 (336)
T ss_dssp             EEEECCCTTCBHHHHHHHCCB
T ss_pred             EEEEecCCCCcHHHHHhhccc
Confidence            899999999999999976543

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.09  E-value=3.3e-11  Score=109.59  Aligned_cols=96  Identities=28%  Similarity=0.323  Sum_probs=70.8

Q ss_pred             HHHhccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCCh------hhHHHHHHHHHHHhcC----CCCCccceee
Q 017984          264 LEKATNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTT------QWVDHFFNEVNLISGI----NHKNLVKLLG  332 (363)
Q Consensus       264 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~------~~~~~~~~E~~~l~~l----~h~niv~l~~  332 (363)
                      .....++|...+.||+|+||.||++.. .+++.||||++.....      .....+.+|+.++.++    +||||+++++
T Consensus        26 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~  105 (312)
T 2iwi_A           26 REAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLD  105 (312)
T ss_dssp             -------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEE
T ss_pred             hhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEE
Confidence            344467799999999999999999986 5688999999965422      1223467899999888    8999999999


Q ss_pred             EEEeCCeeEEEEEc-cCCCChhHHhhcC
Q 017984          333 CSITGPESLLVYEF-VPNQSLLDNLFDK  359 (363)
Q Consensus       333 ~~~~~~~~~lv~Ey-~~~gsL~~~l~~~  359 (363)
                      ++...+..++|||| +++++|.+++.++
T Consensus       106 ~~~~~~~~~~v~e~~~~~~~L~~~l~~~  133 (312)
T 2iwi_A          106 WFETQEGFMLVLERPLPAQDLFDYITEK  133 (312)
T ss_dssp             EC-----CEEEEECCSSEEEHHHHHHHH
T ss_pred             EEecCCeEEEEEEecCCCCCHHHHHHhc
Confidence            99999999999999 8999999998754

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.09  E-value=1.6e-10  Score=107.88  Aligned_cols=90  Identities=23%  Similarity=0.354  Sum_probs=76.6

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCee----
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPES----  340 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~----  340 (363)
                      .++|...+.||+|+||.||++.. .+|+.||||++...  .....+.+.+|+.++..++||||+++++++...+..    
T Consensus        41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~  120 (371)
T 4exu_A           41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY  120 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred             cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence            46788899999999999999986 46899999999753  334467799999999999999999999999877654    


Q ss_pred             --EEEEEccCCCChhHHhhc
Q 017984          341 --LLVYEFVPNQSLLDNLFD  358 (363)
Q Consensus       341 --~lv~Ey~~~gsL~~~l~~  358 (363)
                        ++||||++ ++|.+++..
T Consensus       121 ~~~lv~e~~~-~~l~~~~~~  139 (371)
T 4exu_A          121 DFYLVMPFMQ-TDLQKIMGM  139 (371)
T ss_dssp             CCEEEEECCC-EEHHHHTTS
T ss_pred             eEEEEEcccc-ccHHHHhhc
Confidence              99999997 588887743

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.09  E-value=2e-10  Score=103.44  Aligned_cols=89  Identities=18%  Similarity=0.214  Sum_probs=77.6

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcC-CCCCccceeeEEEeCCeeEEEEE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGI-NHKNLVKLLGCSITGPESLLVYE  345 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E  345 (363)
                      .++|...+.||+|+||.||++.. .+++.||||++.....  .+.+.+|+.++..+ +|+|++++++++......++|||
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e   86 (298)
T 1csn_A            9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD--APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID   86 (298)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT--SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc--cHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence            45688999999999999999995 5689999999865422  23588999999999 79999999999999999999999


Q ss_pred             ccCCCChhHHhhcC
Q 017984          346 FVPNQSLLDNLFDK  359 (363)
Q Consensus       346 y~~~gsL~~~l~~~  359 (363)
                      |+ +++|.+++...
T Consensus        87 ~~-~~~L~~~l~~~   99 (298)
T 1csn_A           87 LL-GPSLEDLLDLC   99 (298)
T ss_dssp             CC-CCBHHHHHHHT
T ss_pred             ec-CCCHHHHHHHh
Confidence            99 99999999854

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.09  E-value=2e-10  Score=104.22  Aligned_cols=93  Identities=29%  Similarity=0.366  Sum_probs=73.1

Q ss_pred             hccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCC-----hhhHHHHHHHHHHHhcCC---CCCccceeeEEEeC
Q 017984          267 ATNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNT-----TQWVDHFFNEVNLISGIN---HKNLVKLLGCSITG  337 (363)
Q Consensus       267 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~-----~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~  337 (363)
                      ..++|...+.||+|+||.||++.. .+++.||||++....     ......+.+|+.++..++   ||||+++++++...
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~   86 (308)
T 3g33_A            7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS   86 (308)
T ss_dssp             ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred             cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence            357899999999999999999996 568999999996321     112345677887777664   99999999999876


Q ss_pred             C-----eeEEEEEccCCCChhHHhhcCC
Q 017984          338 P-----ESLLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       338 ~-----~~~lv~Ey~~~gsL~~~l~~~~  360 (363)
                      .     ..++||||++ |+|.+++....
T Consensus        87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~  113 (308)
T 3g33_A           87 RTDREIKVTLVFEHVD-QDLRTYLDKAP  113 (308)
T ss_dssp             CSSSEEEEEEEEECCC-CBHHHHHHTCC
T ss_pred             CCCCceeEEEEehhhh-cCHHHHHhhcc
Confidence            5     5899999997 59999987654

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.08  E-value=1.7e-10  Score=106.81  Aligned_cols=90  Identities=23%  Similarity=0.348  Sum_probs=75.8

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCe-----
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPE-----  339 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-----  339 (363)
                      .++|...+.||+|+||.||++.. .+|+.||||++...  .....+.+.+|+.++..++||||+++++++.....     
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~  102 (353)
T 3coi_A           23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY  102 (353)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred             CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence            45688899999999999999996 46899999999753  33445679999999999999999999999987654     


Q ss_pred             -eEEEEEccCCCChhHHhhc
Q 017984          340 -SLLVYEFVPNQSLLDNLFD  358 (363)
Q Consensus       340 -~~lv~Ey~~~gsL~~~l~~  358 (363)
                       .++||||++ |+|.+++..
T Consensus       103 ~~~lv~e~~~-~~l~~~~~~  121 (353)
T 3coi_A          103 DFYLVMPFMQ-TDLQKIMGL  121 (353)
T ss_dssp             CCEEEEECCS-EEGGGTTTS
T ss_pred             eEEEEecccc-CCHHHHhcC
Confidence             499999997 589887753

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.07  E-value=1.8e-10  Score=109.99  Aligned_cols=87  Identities=25%  Similarity=0.322  Sum_probs=72.7

Q ss_pred             CCCcCceecccCceEEEEEEcCCCCEEEEEEeccCChhhHHHHHHHHHHHhcC-CCCCccceeeEEEeCCeeEEEEEccC
Q 017984          270 YFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGI-NHKNLVKLLGCSITGPESLLVYEFVP  348 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~Ey~~  348 (363)
                      .|...+.||+|+||.||.....+|+.||||++...   ..+.+.+|+.++.++ +||||+++++++..++..+|||||++
T Consensus        16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~   92 (434)
T 2rio_A           16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN   92 (434)
T ss_dssp             CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS
T ss_pred             eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC
Confidence            34456789999999998766667999999998643   235678999999876 89999999999999999999999996


Q ss_pred             CCChhHHhhcCC
Q 017984          349 NQSLLDNLFDKM  360 (363)
Q Consensus       349 ~gsL~~~l~~~~  360 (363)
                       |+|.++|....
T Consensus        93 -gsL~~~l~~~~  103 (434)
T 2rio_A           93 -LNLQDLVESKN  103 (434)
T ss_dssp             -EEHHHHHHTC-
T ss_pred             -CCHHHHHhccC
Confidence             69999997654

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.06  E-value=1.4e-10  Score=107.26  Aligned_cols=91  Identities=15%  Similarity=0.135  Sum_probs=70.0

Q ss_pred             ccCCCcCceecccCceEEEEEEcC----CCCEEEEEEeccCChh-----------hHHHHHHHHHHHhcCCCCCccceee
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLP----GGEAVAVKRLFYNTTQ-----------WVDHFFNEVNLISGINHKNLVKLLG  332 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~----~g~~vavK~l~~~~~~-----------~~~~~~~E~~~l~~l~h~niv~l~~  332 (363)
                      .++|...+.||+|+||.||++...    ++..+|+|++......           ....+.+|+..+..++||||+++++
T Consensus        36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~  115 (345)
T 2v62_A           36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG  115 (345)
T ss_dssp             SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred             CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence            356888999999999999999974    5778999999754321           1124778899999999999999999


Q ss_pred             EEEe----CCeeEEEEEccCCCChhHHhhcC
Q 017984          333 CSIT----GPESLLVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       333 ~~~~----~~~~~lv~Ey~~~gsL~~~l~~~  359 (363)
                      ++..    ....+|||||+ +++|.+++...
T Consensus       116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~  145 (345)
T 2v62_A          116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQN  145 (345)
T ss_dssp             EEEEESSSCEEEEEEEECE-EEEHHHHCBGG
T ss_pred             ccccccCCCcEEEEEEecc-CCCHHHHHHhc
Confidence            9988    67899999999 99999998764

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.05  E-value=1.7e-10  Score=105.39  Aligned_cols=93  Identities=27%  Similarity=0.366  Sum_probs=73.9

Q ss_pred             hccCCCcCceecccCceEEEEEEc--CCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcC---CCCCccceeeEEE----
Q 017984          267 ATNYFHESNKLGQGGSGSVYKGTL--PGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGI---NHKNLVKLLGCSI----  335 (363)
Q Consensus       267 ~~~~~~~~~~lg~G~~g~Vy~~~~--~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~----  335 (363)
                      ..++|...+.||+|+||.||++..  .+|+.||+|++...  .......+.+|+.++..+   +||||+++++++.    
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~   88 (326)
T 1blx_A            9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT   88 (326)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred             chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence            457789999999999999999996  45889999998642  222223466787777666   8999999999987    


Q ss_pred             -eCCeeEEEEEccCCCChhHHhhcCC
Q 017984          336 -TGPESLLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       336 -~~~~~~lv~Ey~~~gsL~~~l~~~~  360 (363)
                       .....++||||++ |+|.+++....
T Consensus        89 ~~~~~~~lv~e~~~-~~L~~~l~~~~  113 (326)
T 1blx_A           89 DRETKLTLVFEHVD-QDLTTYLDKVP  113 (326)
T ss_dssp             SSEEEEEEEEECCS-CBHHHHHHHSC
T ss_pred             CCCceEEEEEecCC-CCHHHHHHhcc
Confidence             4567899999998 69999987643

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.05  E-value=2.1e-10  Score=106.82  Aligned_cols=92  Identities=13%  Similarity=0.157  Sum_probs=72.5

Q ss_pred             hccCCCcCceecccCceEEEEEEcCC------CCEEEEEEeccCChhhH-----------HHHHHHHHHHhcCCCCCccc
Q 017984          267 ATNYFHESNKLGQGGSGSVYKGTLPG------GEAVAVKRLFYNTTQWV-----------DHFFNEVNLISGINHKNLVK  329 (363)
Q Consensus       267 ~~~~~~~~~~lg~G~~g~Vy~~~~~~------g~~vavK~l~~~~~~~~-----------~~~~~E~~~l~~l~h~niv~  329 (363)
                      ..++|...+.||+|+||.||++.+..      ++.||||++........           ..+..|+..+..++||||++
T Consensus        33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~  112 (364)
T 3op5_A           33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK  112 (364)
T ss_dssp             TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred             CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence            34578899999999999999998743      47899999876543211           12456667788889999999


Q ss_pred             eeeEEEeC----CeeEEEEEccCCCChhHHhhcC
Q 017984          330 LLGCSITG----PESLLVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       330 l~~~~~~~----~~~~lv~Ey~~~gsL~~~l~~~  359 (363)
                      +++++...    ...+|||||+ +++|.+++...
T Consensus       113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~  145 (364)
T 3op5_A          113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEAN  145 (364)
T ss_dssp             EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHT
T ss_pred             EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhc
Confidence            99998764    4589999999 99999999764

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.05  E-value=7.6e-11  Score=109.24  Aligned_cols=86  Identities=16%  Similarity=0.180  Sum_probs=71.9

Q ss_pred             ccCCCcCceecccCceEEEEEEcC---------CCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccc---------
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLP---------GGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVK---------  329 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~---------~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~---------  329 (363)
                      .++|...+.||+|+||.||++...         +++.||+|++...     +.+.+|+.++.+++||||++         
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~  115 (352)
T 2jii_A           41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTP  115 (352)
T ss_dssp             SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred             CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence            367889999999999999999964         3789999999754     35889999999999999998         


Q ss_pred             ------eeeEEEe-CCeeEEEEEccCCCChhHHhhcC
Q 017984          330 ------LLGCSIT-GPESLLVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       330 ------l~~~~~~-~~~~~lv~Ey~~~gsL~~~l~~~  359 (363)
                            +++++.. ....+|||||+ +++|.++|...
T Consensus       116 ~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~  151 (352)
T 2jii_A          116 LLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVS  151 (352)
T ss_dssp             TCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHS
T ss_pred             ccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhC
Confidence                  5677766 67899999999 99999999864

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.03  E-value=3.1e-10  Score=105.25  Aligned_cols=93  Identities=26%  Similarity=0.353  Sum_probs=64.4

Q ss_pred             HHHHHhccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCe-
Q 017984          262 ETLEKATNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPE-  339 (363)
Q Consensus       262 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-  339 (363)
                      .......++|...+.||+|+||.||++.. .+|+.||||++.... .....+.+|+..+..++||||+++++++..... 
T Consensus        16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~   94 (360)
T 3e3p_A           16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER   94 (360)
T ss_dssp             HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred             hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence            45566778899999999999999999997 468999999986542 223456788888999999999999999876443 


Q ss_pred             ------eEEEEEccCCCChhHHh
Q 017984          340 ------SLLVYEFVPNQSLLDNL  356 (363)
Q Consensus       340 ------~~lv~Ey~~~gsL~~~l  356 (363)
                            .++||||+++ +|.+.+
T Consensus        95 ~~~~~~~~lv~e~~~~-~l~~~~  116 (360)
T 3e3p_A           95 DRRDIYLNVVMEYVPD-TLHRCC  116 (360)
T ss_dssp             CTTCEEEEEEEECCSC-BHHHHH
T ss_pred             cccceeEEEEeecccc-cHHHHH
Confidence                  8899999986 554443

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.03  E-value=6.6e-10  Score=102.27  Aligned_cols=90  Identities=18%  Similarity=0.187  Sum_probs=69.2

Q ss_pred             hccCCCcC-ceecccCceEEEEEEcC-CCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEe----CCee
Q 017984          267 ATNYFHES-NKLGQGGSGSVYKGTLP-GGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSIT----GPES  340 (363)
Q Consensus       267 ~~~~~~~~-~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~  340 (363)
                      ..++|... ++||+|+||.||++... +++.||||++... ....   ......+..+.||||+++++++..    ....
T Consensus        26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~---~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~  101 (336)
T 3fhr_A           26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS-PKAR---QEVDHHWQASGGPHIVCILDVYENMHHGKRCL  101 (336)
T ss_dssp             GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS-HHHH---HHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred             ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc-HHHH---HHHHHHHHhcCCCChHHHHHHHhhccCCCceE
Confidence            34567774 46999999999999974 6899999999653 2212   222334566789999999999876    4458


Q ss_pred             EEEEEccCCCChhHHhhcCC
Q 017984          341 LLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       341 ~lv~Ey~~~gsL~~~l~~~~  360 (363)
                      +|||||+++|+|.+++.+..
T Consensus       102 ~lv~e~~~gg~L~~~l~~~~  121 (336)
T 3fhr_A          102 LIIMECMEGGELFSRIQERG  121 (336)
T ss_dssp             EEEEECCTTEEHHHHHHTC-
T ss_pred             EEEEeccCCCCHHHHHHhcC
Confidence            99999999999999998653

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.02  E-value=4.6e-10  Score=106.06  Aligned_cols=81  Identities=20%  Similarity=0.336  Sum_probs=63.2

Q ss_pred             CceecccCceEEEEEEcC---CCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEe--CCeeEEEEEccC
Q 017984          274 SNKLGQGGSGSVYKGTLP---GGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSIT--GPESLLVYEFVP  348 (363)
Q Consensus       274 ~~~lg~G~~g~Vy~~~~~---~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv~Ey~~  348 (363)
                      +++||+|+||.||++...   +++.||||++.....  ...+.+|+.+|.+++||||+++++++..  ....+|||||++
T Consensus        26 g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~  103 (405)
T 3rgf_A           26 GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI--SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE  103 (405)
T ss_dssp             SCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC--CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCS
T ss_pred             CcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC--CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCC
Confidence            558999999999999964   478999999975422  2468899999999999999999999965  678999999997


Q ss_pred             CCChhHHhh
Q 017984          349 NQSLLDNLF  357 (363)
Q Consensus       349 ~gsL~~~l~  357 (363)
                      + +|.+++.
T Consensus       104 ~-~l~~~~~  111 (405)
T 3rgf_A          104 H-DLWHIIK  111 (405)
T ss_dssp             E-EHHHHHH
T ss_pred             C-CHHHHHH
Confidence            4 8888775

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.02  E-value=4.6e-10  Score=102.83  Aligned_cols=91  Identities=21%  Similarity=0.295  Sum_probs=77.4

Q ss_pred             ccCCCcCceecccCceEEEEEEc--CCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCC------ccceeeEEEeCCe
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL--PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKN------LVKLLGCSITGPE  339 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~--~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~~~~~~~~~  339 (363)
                      .++|...+.||+|+||.||++..  .+++.||||+++.. ....+.+.+|+.++..++|+|      ++++++++...+.
T Consensus        13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~   91 (339)
T 1z57_A           13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH   91 (339)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred             cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence            45788999999999999999985  35889999999653 344567899999999886654      9999999999999


Q ss_pred             eEEEEEccCCCChhHHhhcCC
Q 017984          340 SLLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       340 ~~lv~Ey~~~gsL~~~l~~~~  360 (363)
                      .+|||||+ +++|.+++..+.
T Consensus        92 ~~lv~e~~-~~~l~~~l~~~~  111 (339)
T 1z57_A           92 ICIVFELL-GLSTYDFIKENG  111 (339)
T ss_dssp             EEEEEECC-CCBHHHHHHHTT
T ss_pred             EEEEEcCC-CCCHHHHHHhcC
Confidence            99999999 889999997654

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.01  E-value=5e-10  Score=109.77  Aligned_cols=86  Identities=8%  Similarity=0.082  Sum_probs=63.2

Q ss_pred             CcCceecccCceEEEEEEcCCCCEEEEEEeccCC---h-----hhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEE
Q 017984          272 HESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNT---T-----QWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLV  343 (363)
Q Consensus       272 ~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~---~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  343 (363)
                      ...++||+|+||.||++... ++.+++|+.....   .     ...+.|.+|++++.+++||||+++..++...++.+||
T Consensus       339 ~~~~~LG~G~fg~Vy~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV  417 (540)
T 3en9_A          339 IPEHLIGKGAEADIKRDSYL-DFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM  417 (540)
T ss_dssp             ---------CCEEEEEEECS-SCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred             CCCCEEeeCCCEEEEEEEEC-CCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence            44678999999999999654 7889999875421   1     1234589999999999999999777777788888999


Q ss_pred             EEccCCCChhHHhhc
Q 017984          344 YEFVPNQSLLDNLFD  358 (363)
Q Consensus       344 ~Ey~~~gsL~~~l~~  358 (363)
                      |||+++|+|.++|.+
T Consensus       418 mE~~~ggsL~~~l~~  432 (540)
T 3en9_A          418 MSYINGKLAKDVIED  432 (540)
T ss_dssp             EECCCSEEHHHHSTT
T ss_pred             EECCCCCCHHHHHHH
Confidence            999999999998864

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.00  E-value=3.9e-10  Score=107.56  Aligned_cols=89  Identities=20%  Similarity=0.267  Sum_probs=73.7

Q ss_pred             ccCCCcCceecccCceEEEEEEcCCCCEEEEEEeccCChhhHHHHHHHHHHHhcC-CCCCccceeeEEEeCCeeEEEEEc
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGI-NHKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      ...|...+.||+|+||.|+.....+++.||||++.....   ..+.+|+.++.++ +|||||++++++......+|||||
T Consensus        23 ~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~   99 (432)
T 3p23_A           23 KISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIEL   99 (432)
T ss_dssp             TEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEEC
Confidence            345778889999999996654455689999999965432   2357899999999 799999999999999999999999


Q ss_pred             cCCCChhHHhhcCC
Q 017984          347 VPNQSLLDNLFDKM  360 (363)
Q Consensus       347 ~~~gsL~~~l~~~~  360 (363)
                      ++ |+|.+++....
T Consensus       100 ~~-g~L~~~l~~~~  112 (432)
T 3p23_A          100 CA-ATLQEYVEQKD  112 (432)
T ss_dssp             CS-EEHHHHHHSSS
T ss_pred             CC-CCHHHHHHhcC
Confidence            96 59999997654

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.00  E-value=1e-09  Score=104.51  Aligned_cols=91  Identities=15%  Similarity=0.226  Sum_probs=76.4

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcC------CCCCccceeeEEEeCCee
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGI------NHKNLVKLLGCSITGPES  340 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l------~h~niv~l~~~~~~~~~~  340 (363)
                      ..+|...+.||+|+||.||++.. .+++.||||++... ......+.+|+.++..+      .|+||+++++++...+..
T Consensus        96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  174 (429)
T 3kvw_A           96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI  174 (429)
T ss_dssp             TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred             cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence            45688899999999999999986 45889999999753 33456688888888776      577999999999999999


Q ss_pred             EEEEEccCCCChhHHhhcCC
Q 017984          341 LLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       341 ~lv~Ey~~~gsL~~~l~~~~  360 (363)
                      +|||||+. ++|.+++....
T Consensus       175 ~lv~e~~~-~~L~~~l~~~~  193 (429)
T 3kvw_A          175 CMTFELLS-MNLYELIKKNK  193 (429)
T ss_dssp             EEEECCCC-CBHHHHHHHTT
T ss_pred             EEEEeccC-CCHHHHHHhcc
Confidence            99999996 69999987654

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=98.99  E-value=5e-10  Score=105.05  Aligned_cols=90  Identities=22%  Similarity=0.353  Sum_probs=74.0

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcCC--------CCCccceeeEEE---
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGIN--------HKNLVKLLGCSI---  335 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~--------h~niv~l~~~~~---  335 (363)
                      .++|...+.||+|+||.||++.. .+++.||||++... ....+.+.+|+.++..++        |+||+++++++.   
T Consensus        36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~  114 (397)
T 1wak_A           36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG  114 (397)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred             CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence            46788999999999999999985 56889999999753 344567899999999885        788999999987   


Q ss_pred             -eCCeeEEEEEccCCCChhHHhhcC
Q 017984          336 -TGPESLLVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       336 -~~~~~~lv~Ey~~~gsL~~~l~~~  359 (363)
                       .....+|||||+ +++|.+++...
T Consensus       115 ~~~~~~~lv~e~~-~~~l~~~~~~~  138 (397)
T 1wak_A          115 VNGTHICMVFEVL-GHHLLKWIIKS  138 (397)
T ss_dssp             TTEEEEEEEECCC-CCBHHHHHHHT
T ss_pred             CCCceEEEEEecc-CccHHHHHHhc
Confidence             456899999999 55777766543

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=98.97  E-value=5.8e-10  Score=105.97  Aligned_cols=84  Identities=24%  Similarity=0.410  Sum_probs=67.3

Q ss_pred             cCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeC------CeeE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITG------PESL  341 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~~~  341 (363)
                      ..|...+.||+|+||.||++.. .+|+.||||++.....    .+.+|+++|++++|||||++++++...      ..++
T Consensus        54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~  129 (420)
T 1j1b_A           54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN  129 (420)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred             ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence            3577889999999999999997 4589999999965422    235799999999999999999988542      2367


Q ss_pred             EEEEccCCCChhHHhh
Q 017984          342 LVYEFVPNQSLLDNLF  357 (363)
Q Consensus       342 lv~Ey~~~gsL~~~l~  357 (363)
                      |||||+++ +|.+++.
T Consensus       130 lv~e~~~~-~l~~~~~  144 (420)
T 1j1b_A          130 LVLDYVPE-TVYRVAR  144 (420)
T ss_dssp             EEEECCCE-EHHHHHH
T ss_pred             eehhcccc-cHHHHHH
Confidence            99999986 6666553

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=98.96  E-value=1.4e-09  Score=97.82  Aligned_cols=88  Identities=24%  Similarity=0.302  Sum_probs=73.6

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEE-EeCCeeEEEEE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCS-ITGPESLLVYE  345 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~lv~E  345 (363)
                      .++|...+.||+|+||.||++.. .+++.||||++......  +.+.+|+.++..++|++++..+..+ ...+..++|||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e   85 (296)
T 3uzp_A            8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME   85 (296)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSC--CHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcch--hHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence            46788999999999999999996 67899999998754322  3588999999999988877766655 56778899999


Q ss_pred             ccCCCChhHHhhc
Q 017984          346 FVPNQSLLDNLFD  358 (363)
Q Consensus       346 y~~~gsL~~~l~~  358 (363)
                      |+ +++|.+++..
T Consensus        86 ~~-~~~L~~~~~~   97 (296)
T 3uzp_A           86 LL-GPSLEDLFNF   97 (296)
T ss_dssp             CC-CCBHHHHHHH
T ss_pred             ec-CCCHHHHHHh
Confidence            99 8999999973

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=98.96  E-value=1.1e-09  Score=99.56  Aligned_cols=88  Identities=17%  Similarity=0.258  Sum_probs=64.2

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCC-hhh-HHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNT-TQW-VDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVY  344 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~-~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  344 (363)
                      .++|...+.||+|+||.||++.. .+|+.||||++.... ... .+.+..+..++..++||||+++++++...+..+|||
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~  103 (318)
T 2dyl_A           24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM  103 (318)
T ss_dssp             GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence            45678889999999999999997 468999999997542 222 334555556788889999999999999999999999


Q ss_pred             EccCCCChhHHh
Q 017984          345 EFVPNQSLLDNL  356 (363)
Q Consensus       345 Ey~~~gsL~~~l  356 (363)
                      ||+ ++.+..++
T Consensus       104 e~~-~~~~~~l~  114 (318)
T 2dyl_A          104 ELM-GTCAEKLK  114 (318)
T ss_dssp             CCC-SEEHHHHH
T ss_pred             ecc-CCcHHHHH
Confidence            999 44554444

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=98.94  E-value=1.4e-09  Score=101.55  Aligned_cols=89  Identities=11%  Similarity=0.029  Sum_probs=61.1

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCC---hhhHHHHHHHH---HHHhcCCCCCcccee-------eE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNT---TQWVDHFFNEV---NLISGINHKNLVKLL-------GC  333 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~E~---~~l~~l~h~niv~l~-------~~  333 (363)
                      ...|...+.||+|+||.||++.. .+|+.||||++....   ....+.+.+|+   .+|.. +||||++++       ++
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~  139 (371)
T 3q60_A           61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDA  139 (371)
T ss_dssp             EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEE
T ss_pred             ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehh
Confidence            44588899999999999999996 468999999998643   23455678885   55555 799988755       34


Q ss_pred             EEeC-----------------CeeEEEEEccCCCChhHHhhc
Q 017984          334 SITG-----------------PESLLVYEFVPNQSLLDNLFD  358 (363)
Q Consensus       334 ~~~~-----------------~~~~lv~Ey~~~gsL~~~l~~  358 (363)
                      +...                 ...+|||||++ |+|.++|..
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~  180 (371)
T 3q60_A          140 VAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFST  180 (371)
T ss_dssp             EEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHH
T ss_pred             eecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHH
Confidence            4332                 34899999999 899999975

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=98.93  E-value=7.1e-10  Score=104.45  Aligned_cols=81  Identities=22%  Similarity=0.386  Sum_probs=65.6

Q ss_pred             ccCCCcCceecccCceEEEEEEcCCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCe------eE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPE------SL  341 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~------~~  341 (363)
                      ...|...+.||+|+||.||++....+..+|+|++......    ..+|+.+++.++||||+++++++.....      ++
T Consensus        39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~----~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~  114 (394)
T 4e7w_A           39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF----KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLN  114 (394)
T ss_dssp             EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS----CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEE
T ss_pred             cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch----HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEE
Confidence            3458889999999999999999876677999988654322    2479999999999999999999865433      88


Q ss_pred             EEEEccCCCCh
Q 017984          342 LVYEFVPNQSL  352 (363)
Q Consensus       342 lv~Ey~~~gsL  352 (363)
                      |||||++++.+
T Consensus       115 lv~e~~~~~l~  125 (394)
T 4e7w_A          115 LVLEYVPETVY  125 (394)
T ss_dssp             EEEECCSEEHH
T ss_pred             EEeeccCccHH
Confidence            99999987533

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=98.92  E-value=2e-09  Score=96.56  Aligned_cols=88  Identities=13%  Similarity=0.086  Sum_probs=68.6

Q ss_pred             HHHHhccCCCcCceecccCceEEEEEEcCCCCEEEEEEeccCCh------------------hhHHHHHHHHHHHhcCCC
Q 017984          263 TLEKATNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTT------------------QWVDHFFNEVNLISGINH  324 (363)
Q Consensus       263 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~------------------~~~~~~~~E~~~l~~l~h  324 (363)
                      .+......|...+.||+|+||.||++...+|+.||||.++....                  .....+.+|+.++.+++ 
T Consensus        84 ~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~-  162 (282)
T 1zar_A           84 RLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ-  162 (282)
T ss_dssp             HHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT-
T ss_pred             HHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc-
Confidence            34444555667799999999999999997799999999964321                  13567999999999998 


Q ss_pred             CCccceeeEEEeCCeeEEEEEccCCCChhH
Q 017984          325 KNLVKLLGCSITGPESLLVYEFVPNQSLLD  354 (363)
Q Consensus       325 ~niv~l~~~~~~~~~~~lv~Ey~~~gsL~~  354 (363)
                       | +++.+++.. +..++||||+++|+|.+
T Consensus       163 -~-~~v~~~~~~-~~~~lvmE~~~g~~L~~  189 (282)
T 1zar_A          163 -G-LAVPKVYAW-EGNAVLMELIDAKELYR  189 (282)
T ss_dssp             -T-SSSCCEEEE-ETTEEEEECCCCEEGGG
T ss_pred             -C-CCcCeEEec-cceEEEEEecCCCcHHH
Confidence             4 666665544 55699999999999988

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=98.92  E-value=3e-10  Score=103.79  Aligned_cols=96  Identities=24%  Similarity=0.292  Sum_probs=78.4

Q ss_pred             HHHhccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCCh------hhHHHHHHHHHHHhcCC--CCCccceeeEE
Q 017984          264 LEKATNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTT------QWVDHFFNEVNLISGIN--HKNLVKLLGCS  334 (363)
Q Consensus       264 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~------~~~~~~~~E~~~l~~l~--h~niv~l~~~~  334 (363)
                      .....++|...+.||+|+||.||++.. .+++.||||++.....      ...+.+.+|+.++.+++  ||||+++++++
T Consensus        38 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~  117 (320)
T 3a99_A           38 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWF  117 (320)
T ss_dssp             --CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEE
T ss_pred             cCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEE
Confidence            334567789999999999999999985 5688999999964311      12245778999999996  59999999999


Q ss_pred             EeCCeeEEEEEccCC-CChhHHhhcC
Q 017984          335 ITGPESLLVYEFVPN-QSLLDNLFDK  359 (363)
Q Consensus       335 ~~~~~~~lv~Ey~~~-gsL~~~l~~~  359 (363)
                      ...+..++||||+.+ ++|.+++.++
T Consensus       118 ~~~~~~~lv~e~~~~~~~L~~~l~~~  143 (320)
T 3a99_A          118 ERPDSFVLILERPEPVQDLFDFITER  143 (320)
T ss_dssp             ECSSEEEEEEECCSSEEEHHHHHHHH
T ss_pred             ecCCcEEEEEEcCCCCccHHHHHhcc
Confidence            999999999999976 8999998753

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=98.92  E-value=2.3e-09  Score=100.46  Aligned_cols=96  Identities=25%  Similarity=0.262  Sum_probs=78.6

Q ss_pred             HHHHhccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcCC-CC-----CccceeeEEE
Q 017984          263 TLEKATNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGIN-HK-----NLVKLLGCSI  335 (363)
Q Consensus       263 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~l~~~~~  335 (363)
                      ......++|...+.||+|+||.||++.. .+++.||||+++.. .....++.+|+.++..++ |+     +|+++++++.
T Consensus        48 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~  126 (382)
T 2vx3_A           48 NGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFM  126 (382)
T ss_dssp             TTCEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEE
T ss_pred             cCCEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeec
Confidence            3344567899999999999999999986 46889999999743 344567888999888874 55     4999999999


Q ss_pred             eCCeeEEEEEccCCCChhHHhhcCC
Q 017984          336 TGPESLLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       336 ~~~~~~lv~Ey~~~gsL~~~l~~~~  360 (363)
                      ..+..+|||||++ |+|.++|....
T Consensus       127 ~~~~~~lv~e~~~-~~L~~~l~~~~  150 (382)
T 2vx3_A          127 FRNHLCLVFEMLS-YNLYDLLRNTN  150 (382)
T ss_dssp             ETTEEEEEEECCC-CBHHHHHHHTT
T ss_pred             cCCceEEEEecCC-CCHHHHHhhcC
Confidence            9999999999996 59999987653

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=98.92  E-value=1.1e-09  Score=101.83  Aligned_cols=90  Identities=20%  Similarity=0.259  Sum_probs=76.0

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcCC-----------CCCccceeeEEE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGIN-----------HKNLVKLLGCSI  335 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~l~~~~~  335 (363)
                      .++|...+.||+|+||.||++.. .+++.||||++... ....+.+.+|+.++.+++           ||||+++++++.
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~   96 (373)
T 1q8y_A           18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN   96 (373)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred             CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence            35688899999999999999996 56899999999743 334567899999999886           899999999988


Q ss_pred             eCC----eeEEEEEccCCCChhHHhhcC
Q 017984          336 TGP----ESLLVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       336 ~~~----~~~lv~Ey~~~gsL~~~l~~~  359 (363)
                      ..+    ..++||||+ +++|.+++...
T Consensus        97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~  123 (373)
T 1q8y_A           97 HKGPNGVHVVMVFEVL-GENLLALIKKY  123 (373)
T ss_dssp             EEETTEEEEEEEECCC-CEEHHHHHHHT
T ss_pred             ccCCCCceEEEEEecC-CCCHHHHHHHh
Confidence            654    789999999 88999998753

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=98.91  E-value=1.8e-09  Score=97.05  Aligned_cols=89  Identities=24%  Similarity=0.287  Sum_probs=70.3

Q ss_pred             hccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEE-EeCCeeEEEE
Q 017984          267 ATNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCS-ITGPESLLVY  344 (363)
Q Consensus       267 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~lv~  344 (363)
                      ..++|...+.||+|+||.||++.. .+++.||||++.....  ...+.+|+.++..++|++++..+..+ ...+..++||
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~   84 (296)
T 4hgt_A            7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM   84 (296)
T ss_dssp             ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred             cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEE
Confidence            457799999999999999999995 5688999998764322  13488999999999988877776655 6677889999


Q ss_pred             EccCCCChhHHhhc
Q 017984          345 EFVPNQSLLDNLFD  358 (363)
Q Consensus       345 Ey~~~gsL~~~l~~  358 (363)
                      ||+ +++|.+++..
T Consensus        85 e~~-~~~L~~~~~~   97 (296)
T 4hgt_A           85 ELL-GPSLEDLFNF   97 (296)
T ss_dssp             ECC-CCBHHHHHHH
T ss_pred             Ecc-CCCHHHHHHH
Confidence            999 9999999873

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=98.87  E-value=4.7e-09  Score=101.39  Aligned_cols=88  Identities=24%  Similarity=0.308  Sum_probs=72.7

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCC-CCccceeeEEEeCCeeEEEEE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINH-KNLVKLLGCSITGPESLLVYE  345 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~lv~E  345 (363)
                      .++|...++||+|+||.||++.. .+++.||||++......  .++.+|++++..++| ++|..+..+....+..+||||
T Consensus         6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~--~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme   83 (483)
T 3sv0_A            6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH--PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD   83 (483)
T ss_dssp             TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS--CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc--HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence            46789999999999999999995 56899999988754322  348899999999987 555566666777889999999


Q ss_pred             ccCCCChhHHhhc
Q 017984          346 FVPNQSLLDNLFD  358 (363)
Q Consensus       346 y~~~gsL~~~l~~  358 (363)
                      |+ +++|.+++..
T Consensus        84 ~~-g~sL~~ll~~   95 (483)
T 3sv0_A           84 LL-GPSLEDLFNF   95 (483)
T ss_dssp             CC-CCBHHHHHHH
T ss_pred             CC-CCCHHHHHHh
Confidence            99 9999999873

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=98.86  E-value=4e-09  Score=97.20  Aligned_cols=90  Identities=18%  Similarity=0.218  Sum_probs=74.7

Q ss_pred             ccCCCcCceecccCceEEEEEEcC-CC-CEEEEEEeccCChhhHHHHHHHHHHHhcCCCCC------ccceeeEEEeCCe
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLP-GG-EAVAVKRLFYNTTQWVDHFFNEVNLISGINHKN------LVKLLGCSITGPE  339 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~-~g-~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~~~~~~~~~  339 (363)
                      .++|...+.||+|+||.||++... ++ +.||+|+++.. ....+.+.+|+.++..++|++      ++.+.+++...+.
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~   96 (355)
T 2eu9_A           18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH   96 (355)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred             cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence            467889999999999999999863 34 68999999753 344567889999999987766      8999999999999


Q ss_pred             eEEEEEccCCCChhHHhhcC
Q 017984          340 SLLVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       340 ~~lv~Ey~~~gsL~~~l~~~  359 (363)
                      .+|||||+ +++|.+++...
T Consensus        97 ~~lv~e~~-~~~l~~~l~~~  115 (355)
T 2eu9_A           97 MCIAFELL-GKNTFEFLKEN  115 (355)
T ss_dssp             EEEEEECC-CCBHHHHHHHT
T ss_pred             EEEEEecc-CCChHHHHHhc
Confidence            99999999 66777777654

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=98.78  E-value=5.8e-09  Score=102.77  Aligned_cols=84  Identities=18%  Similarity=0.164  Sum_probs=61.7

Q ss_pred             cccCceEEEEEE-cCCCCEEEEEEeccC----------ChhhHHHHHHHHHHHhcC-CCCCccceeeEEEeCCeeEEEEE
Q 017984          278 GQGGSGSVYKGT-LPGGEAVAVKRLFYN----------TTQWVDHFFNEVNLISGI-NHKNLVKLLGCSITGPESLLVYE  345 (363)
Q Consensus       278 g~G~~g~Vy~~~-~~~g~~vavK~l~~~----------~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~E  345 (363)
                      +.|..|.+..+. ..-|+.+++|.+...          .....++|.+|+++|+++ .|+||+++++++++++..|||||
T Consensus       243 ~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVME  322 (569)
T 4azs_A          243 YAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVME  322 (569)
T ss_dssp             C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEEE
T ss_pred             ccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEEe
Confidence            344444443322 223778999999643          112346799999999999 79999999999999999999999


Q ss_pred             ccCCCChhHHhhcCCC
Q 017984          346 FVPNQSLLDNLFDKML  361 (363)
Q Consensus       346 y~~~gsL~~~l~~~~~  361 (363)
                      |++||+|.++|.+...
T Consensus       323 yv~G~~L~d~i~~~~~  338 (569)
T 4azs_A          323 KLPGRLLSDMLAAGEE  338 (569)
T ss_dssp             CCCSEEHHHHHHTTCC
T ss_pred             cCCCCcHHHHHHhCCC
Confidence            9999999999987653

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=98.42  E-value=1.2e-07  Score=83.82  Aligned_cols=83  Identities=14%  Similarity=0.131  Sum_probs=59.7

Q ss_pred             CCcCceecccCceEEEEEEc-CCCCE--EEEEEeccCChh------------------------hHHHHHHHHHHHhcCC
Q 017984          271 FHESNKLGQGGSGSVYKGTL-PGGEA--VAVKRLFYNTTQ------------------------WVDHFFNEVNLISGIN  323 (363)
Q Consensus       271 ~~~~~~lg~G~~g~Vy~~~~-~~g~~--vavK~l~~~~~~------------------------~~~~~~~E~~~l~~l~  323 (363)
                      +...+.||+|+||.||++.. .+|+.  ||||+++.....                        ....+.+|+.+|.+++
T Consensus        49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~  128 (258)
T 1zth_A           49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK  128 (258)
T ss_dssp             EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence            45678999999999999997 67888  999987543111                        1236889999999998


Q ss_pred             CCCc--cceeeEEEeCCeeEEEEEccCC-C----ChhHHhh
Q 017984          324 HKNL--VKLLGCSITGPESLLVYEFVPN-Q----SLLDNLF  357 (363)
Q Consensus       324 h~ni--v~l~~~~~~~~~~~lv~Ey~~~-g----sL~~~l~  357 (363)
                      |+++  ..++..    ...+|||||+.+ |    +|.+++.
T Consensus       129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~  165 (258)
T 1zth_A          129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGR  165 (258)
T ss_dssp             HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGG
T ss_pred             hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhh
Confidence            8864  333332    356899999942 4    6666543

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=98.29  E-value=2.9e-07  Score=85.62  Aligned_cols=86  Identities=8%  Similarity=0.125  Sum_probs=55.0

Q ss_pred             cCCCcCceecccCceEEEEEEcCCCCEEEEEEeccCC--------------hhhHHHH--------HHHHHHHhcCCCCC
Q 017984          269 NYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNT--------------TQWVDHF--------FNEVNLISGINHKN  326 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~--------------~~~~~~~--------~~E~~~l~~l~h~n  326 (363)
                      .-|.+.+.||+|++|.||++...+|+.||||+++...              ......+        .+|...|.++.+.+
T Consensus        95 ~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~g  174 (397)
T 4gyi_A           95 DVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEG  174 (397)
T ss_dssp             SCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcC
Confidence            3478889999999999999999889999999875320              0011122        34445555554333


Q ss_pred             ccceeeEEEeCCeeEEEEEccCCCChhHHh
Q 017984          327 LVKLLGCSITGPESLLVYEFVPNQSLLDNL  356 (363)
Q Consensus       327 iv~l~~~~~~~~~~~lv~Ey~~~gsL~~~l  356 (363)
                      +....-+...  ..+|||||++|++|.+++
T Consensus       175 v~vp~p~~~~--~~~LVME~i~G~~L~~l~  202 (397)
T 4gyi_A          175 FPVPEPIAQS--RHTIVMSLVDALPMRQVS  202 (397)
T ss_dssp             CSCCCEEEEE--TTEEEEECCSCEEGGGCC
T ss_pred             CCCCeeeecc--CceEEEEecCCccHhhhc
Confidence            3211111111  236999999999887654

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=98.14  E-value=1.1e-06  Score=83.07  Aligned_cols=58  Identities=16%  Similarity=0.181  Sum_probs=46.3

Q ss_pred             hccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCC---hhhHHHHHHHHHHHhcCCC
Q 017984          267 ATNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNT---TQWVDHFFNEVNLISGINH  324 (363)
Q Consensus       267 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h  324 (363)
                      ....|...++||+|+||.||++.. .+|+.||||++....   ....+.|.+|+.++..++|
T Consensus        76 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~  137 (413)
T 3dzo_A           76 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRG  137 (413)
T ss_dssp             CCEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTT
T ss_pred             CceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhcc
Confidence            344577788999999999999995 579999999997432   2235679999999999987

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=97.78  E-value=4.2e-05  Score=67.15  Aligned_cols=91  Identities=12%  Similarity=-0.028  Sum_probs=70.8

Q ss_pred             HHhccCCCcCceecccCceEEEEEEcCCCCEEEEEEeccCChhhHHHHHHHHHHHhcCC-CCCccceeeEEEeCCeeEEE
Q 017984          265 EKATNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGIN-HKNLVKLLGCSITGPESLLV  343 (363)
Q Consensus       265 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv  343 (363)
                      ....++|.....++.|+.+.||+.... ++.+++|+...........+.+|+.+++.+. |..+.+++++....+..|+|
T Consensus        10 ~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv   88 (263)
T 3tm0_A           10 KKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLL   88 (263)
T ss_dssp             HHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEE
T ss_pred             HHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEE
Confidence            334456777777888888999999864 6789999986521122335889999999884 67788999999888899999


Q ss_pred             EEccCCCChhHHh
Q 017984          344 YEFVPNQSLLDNL  356 (363)
Q Consensus       344 ~Ey~~~gsL~~~l  356 (363)
                      |||++|.+|.+.+
T Consensus        89 ~e~i~G~~l~~~~  101 (263)
T 3tm0_A           89 MSEADGVLCSEEY  101 (263)
T ss_dssp             EECCSSEEHHHHC
T ss_pred             EEecCCeehhhcc
Confidence            9999999998753

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=97.33  E-value=0.00014  Score=63.35  Aligned_cols=73  Identities=18%  Similarity=0.194  Sum_probs=56.8

Q ss_pred             cccCceEEEEEEcCCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCC--ccceeeEEEeCCeeEEEEEccCCCChh
Q 017984          278 GQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKN--LVKLLGCSITGPESLLVYEFVPNQSLL  353 (363)
Q Consensus       278 g~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~~~~~lv~Ey~~~gsL~  353 (363)
                      +.|..+.||+....+|..+++|.....   ....+.+|+.+++.+.+.+  +.+++++...++..++||||++|.+|.
T Consensus        29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~  103 (264)
T 1nd4_A           29 IGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL  103 (264)
T ss_dssp             CTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT
T ss_pred             cCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC
Confidence            355569999998777888999987653   2235788999999886544  456888887777889999999998884

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=95.82  E-value=0.015  Score=51.53  Aligned_cols=80  Identities=16%  Similarity=0.173  Sum_probs=56.8

Q ss_pred             CCCcCceecccCceEEEEEEcCCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCC---CccceeeEEEeCCeeEEEEEc
Q 017984          270 YFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHK---NLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      .+.....+|.|..+.||+..+.||+.+.+|+-..........|.+|...|+.|...   -+.+.++.  .  .-++||||
T Consensus        16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~--~--~~~lv~e~   91 (288)
T 3f7w_A           16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW--D--DRTLAMEW   91 (288)
T ss_dssp             CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE--E--TTEEEEEC
T ss_pred             CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec--c--CceEEEEe
Confidence            34456678999999999999999999999987654333344588999988877422   23344443  2  24789999


Q ss_pred             cCCCChh
Q 017984          347 VPNQSLL  353 (363)
Q Consensus       347 ~~~gsL~  353 (363)
                      ++++...
T Consensus        92 l~~~~~~   98 (288)
T 3f7w_A           92 VDERPPT   98 (288)
T ss_dssp             CCCCCCC
T ss_pred             ecccCCC
Confidence            9876643

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=95.53  E-value=0.012  Score=53.93  Aligned_cols=80  Identities=14%  Similarity=0.221  Sum_probs=56.9

Q ss_pred             cCceecccCceEEEEEEcCCCCEEEEEEec--cCC-hhhHHHHHHHHHHHhcCC--CCCccceeeEEEeC---CeeEEEE
Q 017984          273 ESNKLGQGGSGSVYKGTLPGGEAVAVKRLF--YNT-TQWVDHFFNEVNLISGIN--HKNLVKLLGCSITG---PESLLVY  344 (363)
Q Consensus       273 ~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~--~~~-~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~---~~~~lv~  344 (363)
                      ..+.|+.|.++.+|+....+ ..+++|+..  ... ......+.+|..+++.+.  +..+.+++.++.+.   +..|+||
T Consensus        42 ~~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm  120 (359)
T 3dxp_A           42 SVEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM  120 (359)
T ss_dssp             EEEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred             eEEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence            45678899999999988764 578888775  322 122346889999999886  45678888887765   4589999


Q ss_pred             EccCCCChh
Q 017984          345 EFVPNQSLL  353 (363)
Q Consensus       345 Ey~~~gsL~  353 (363)
                      ||++|..|.
T Consensus       121 e~v~G~~l~  129 (359)
T 3dxp_A          121 EFVSGRVLW  129 (359)
T ss_dssp             ECCCCBCCC
T ss_pred             EecCCeecC
Confidence            999998874

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=94.70  E-value=0.1  Score=46.81  Aligned_cols=77  Identities=17%  Similarity=0.125  Sum_probs=60.2

Q ss_pred             CcCceecccCceEEEEEEcCCCCEEEEEEeccCChhhHHHHHHHHHHHhcCC---CCCccceeeEEEeCCeeEEEEEccC
Q 017984          272 HESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGIN---HKNLVKLLGCSITGPESLLVYEFVP  348 (363)
Q Consensus       272 ~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lv~Ey~~  348 (363)
                      .....|+.|....+|+.... +..+.+|+....   ....|..|.+.|+.|.   ...+.+++.+....+..++||||++
T Consensus        39 ~~~~~l~gG~~n~~y~v~~~-~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~  114 (312)
T 3jr1_A           39 KHKEKLYSGEMNEIWLINDE-VQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALN  114 (312)
T ss_dssp             CEEEEECCSSSSEEEEEESS-SCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCC
T ss_pred             eeeEEeCCccceeeeEEEEC-CCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEecc
Confidence            34567899999999998864 667888987532   3556889998888773   3567788888877788999999999


Q ss_pred             CCCh
Q 017984          349 NQSL  352 (363)
Q Consensus       349 ~gsL  352 (363)
                      +..+
T Consensus       115 G~~~  118 (312)
T 3jr1_A          115 KSKN  118 (312)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            9875

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=94.03  E-value=0.075  Score=49.21  Aligned_cols=76  Identities=14%  Similarity=0.128  Sum_probs=49.6

Q ss_pred             CceecccCceEEEEEEcC-CCCEEEEEEeccCCh-------hhHHHHHHHHHHHhcCCC--CCcc-ceeeEEEeCCeeEE
Q 017984          274 SNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYNTT-------QWVDHFFNEVNLISGINH--KNLV-KLLGCSITGPESLL  342 (363)
Q Consensus       274 ~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-------~~~~~~~~E~~~l~~l~h--~niv-~l~~~~~~~~~~~l  342 (363)
                      .+.||.|..+.||++... +++.++||.......       .....+..|.+++..+.+  +..+ +++.+  +.+..++
T Consensus        35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l  112 (397)
T 2olc_A           35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT  112 (397)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred             EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence            457899999999999764 467899998753211       123456788888887632  3333 45433  4455689


Q ss_pred             EEEccCCCC
Q 017984          343 VYEFVPNQS  351 (363)
Q Consensus       343 v~Ey~~~gs  351 (363)
                      ||||+++..
T Consensus       113 vmE~l~g~~  121 (397)
T 2olc_A          113 VMEDLSHLK  121 (397)
T ss_dssp             EECCCTTSE
T ss_pred             EEEeCCCcc
Confidence            999998743

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=93.98  E-value=0.2  Score=43.39  Aligned_cols=78  Identities=14%  Similarity=0.132  Sum_probs=56.9

Q ss_pred             eecccCce-EEEEEEcC-CCCEEEEEEeccCChhhHHHHHHHHHHHhcCC-CCCccceeeEEEeCCeeEEEEEccCCCCh
Q 017984          276 KLGQGGSG-SVYKGTLP-GGEAVAVKRLFYNTTQWVDHFFNEVNLISGIN-HKNLVKLLGCSITGPESLLVYEFVPNQSL  352 (363)
Q Consensus       276 ~lg~G~~g-~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~Ey~~~gsL  352 (363)
                      .+..|..+ .||+.... ++..+.+|+-..   .....+.+|..+|+.+. +--+.++++++..++..++|||+++|.++
T Consensus        31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~---~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~  107 (272)
T 4gkh_A           31 RDNVGQSGATIYRLYGKPNAPELFLKHGKG---SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTA  107 (272)
T ss_dssp             EEECSSSSCEEEEEECCTTCCCEEEEEEET---HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEH
T ss_pred             EccCCCcCCeEEEEEecCCCeEEEEEECCC---CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccc
Confidence            34445554 68987764 466788987653   23456889999988774 33466788888888999999999999887


Q ss_pred             hHHh
Q 017984          353 LDNL  356 (363)
Q Consensus       353 ~~~l  356 (363)
                      .+..
T Consensus       108 ~~~~  111 (272)
T 4gkh_A          108 FQVL  111 (272)
T ss_dssp             HHHH
T ss_pred             cccc
Confidence            6643

>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}

Probab=93.89  E-value=0.034  Score=33.79  Aligned_cols=13  Identities=31%  Similarity=0.286  Sum_probs=5.5

Q ss_pred             HHHHHHHhhhhhh
Q 017984          222 LVFSLVAFFVRRK  234 (363)
Q Consensus       222 l~~~~~~~~~~r~  234 (363)
                      +++++++++++||
T Consensus        25 ~ii~~~~~~~~RR   37 (44)
T 2ks1_B           25 LVVALGIGLFMRR   37 (44)
T ss_dssp             HHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHhhh
Confidence            3333444444444

>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}

Probab=92.32  E-value=0.046  Score=33.12  Aligned_cols=13  Identities=15%  Similarity=0.237  Sum_probs=5.4

Q ss_pred             HHHHHHHhhhhhh
Q 017984          222 LVFSLVAFFVRRK  234 (363)
Q Consensus       222 l~~~~~~~~~~r~  234 (363)
                      +++++++++++||
T Consensus        24 ~ii~~~~~~~~RR   36 (44)
T 2l2t_A           24 VIVGLTFAVYVRR   36 (44)
T ss_dssp             HHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHhhh
Confidence            3333444444444

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=92.24  E-value=0.33  Score=43.13  Aligned_cols=76  Identities=16%  Similarity=0.114  Sum_probs=54.6

Q ss_pred             CceecccCceEEEEEEcCCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCC---CccceeeEEE-eCCeeEEEEEccCC
Q 017984          274 SNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHK---NLVKLLGCSI-TGPESLLVYEFVPN  349 (363)
Q Consensus       274 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~-~~~~~~lv~Ey~~~  349 (363)
                      ...++.|....||+.    |..+++|+..  .......+.+|.++|..+.+.   .+.+.+.+.. ..+..++||||++|
T Consensus        24 v~~l~~G~~n~v~~v----g~~~VlR~~~--~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G   97 (306)
T 3tdw_A           24 VESLGEGFRNYAILV----NGDWVFRFPK--SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG   97 (306)
T ss_dssp             EEEEEECSSEEEEEE----TTTEEEEEES--SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred             eeecCCCcceeEEEE----CCEEEEEecC--CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence            446788888899987    4567888742  233456799999999998653   2455665554 34567899999999


Q ss_pred             CChhHH
Q 017984          350 QSLLDN  355 (363)
Q Consensus       350 gsL~~~  355 (363)
                      ..|.+.
T Consensus        98 ~~l~~~  103 (306)
T 3tdw_A           98 QILGED  103 (306)
T ss_dssp             EECHHH
T ss_pred             eECchh
Confidence            888763

>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A

Probab=91.75  E-value=0.056  Score=32.68  Aligned_cols=10  Identities=10%  Similarity=0.132  Sum_probs=3.8

Q ss_pred             HHHHhhhhhh
Q 017984          225 SLVAFFVRRK  234 (363)
Q Consensus       225 ~~~~~~~~r~  234 (363)
                      +++++++.||
T Consensus        28 ~l~~~~~~RR   37 (44)
T 2jwa_A           28 GVVFGILIKR   37 (44)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHhheeh
Confidence            3333334343

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A

Probab=89.92  E-value=0.042  Score=52.27  Aligned_cols=61  Identities=7%  Similarity=0.013  Sum_probs=17.8

Q ss_pred             cCceecccCceEEEEEEcCC-CCEEEE------EEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEe
Q 017984          273 ESNKLGQGGSGSVYKGTLPG-GEAVAV------KRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSIT  336 (363)
Q Consensus       273 ~~~~lg~G~~g~Vy~~~~~~-g~~vav------K~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~  336 (363)
                      ..+.||   ||.||+|.+.. ..+||+      |..+..  +.+....|.+|..++..++|||+++.+++-..
T Consensus       146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~  215 (463)
T 3cxl_A          146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH  215 (463)
T ss_dssp             STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred             ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence            344565   99999999853 357888      766542  23344578999999999999999999887653

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=89.26  E-value=0.13  Score=46.81  Aligned_cols=81  Identities=10%  Similarity=0.014  Sum_probs=54.6

Q ss_pred             Ccee-cccCceEEEEEEcC-------CCCEEEEEEeccCC---hhhHHHHHHHHHHHhcCC-C--CCccceeeEEEeC--
Q 017984          274 SNKL-GQGGSGSVYKGTLP-------GGEAVAVKRLFYNT---TQWVDHFFNEVNLISGIN-H--KNLVKLLGCSITG--  337 (363)
Q Consensus       274 ~~~l-g~G~~g~Vy~~~~~-------~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~-h--~niv~l~~~~~~~--  337 (363)
                      .+.| +.|....+|+....       +++.+++|+.....   ......+.+|..++..+. +  -.+.+++.+....  
T Consensus        25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~  104 (357)
T 3ats_A           25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV  104 (357)
T ss_dssp             EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred             EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence            3567 78888999988754       25678888764322   001235778888888774 2  3466777776554  


Q ss_pred             -CeeEEEEEccCCCChhH
Q 017984          338 -PESLLVYEFVPNQSLLD  354 (363)
Q Consensus       338 -~~~~lv~Ey~~~gsL~~  354 (363)
                       +..++||||++|..|.+
T Consensus       105 ~g~~~~v~e~l~G~~l~~  122 (357)
T 3ats_A          105 LGTPFFLMDYVEGVVPPD  122 (357)
T ss_dssp             TSSCEEEEECCCCBCCCB
T ss_pred             cCCceEEEEecCCCChhh
Confidence             35689999999987764

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=87.04  E-value=0.52  Score=41.64  Aligned_cols=75  Identities=16%  Similarity=0.181  Sum_probs=51.3

Q ss_pred             CceecccCceEEEEEEcCCCCEEEEEEeccCChhhHHHHHHHHHHHhcCC-CCC--ccceeeEEEeCC---eeEEEEEcc
Q 017984          274 SNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGIN-HKN--LVKLLGCSITGP---ESLLVYEFV  347 (363)
Q Consensus       274 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~n--iv~l~~~~~~~~---~~~lv~Ey~  347 (363)
                      .+.++.|....||+..    ..+++|+...  ......+.+|.++|..+. +..  +.+++......+   ..|+|||++
T Consensus        25 i~~~~~G~~n~v~~v~----~~~vlR~~~~--~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i   98 (304)
T 3sg8_A           25 IEISGEGNDCIAYEIN----RDFIFKFPKH--SRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI   98 (304)
T ss_dssp             CCEEEECSSEEEEEST----TSEEEEEESS--HHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred             eEecCCCCcceEEEEC----CEEEEEecCC--cchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence            4568999999999853    4588887643  234567899999998873 333  334444333322   358999999


Q ss_pred             CCCChhH
Q 017984          348 PNQSLLD  354 (363)
Q Consensus       348 ~~gsL~~  354 (363)
                      +|.+|.+
T Consensus        99 ~G~~l~~  105 (304)
T 3sg8_A           99 KGVPLTP  105 (304)
T ss_dssp             CCEECCH
T ss_pred             CCeECCc
Confidence            9988875

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=84.32  E-value=2.7  Score=37.25  Aligned_cols=74  Identities=18%  Similarity=0.239  Sum_probs=42.1

Q ss_pred             ceecccCceEEEEEEcCCCCEEEEEEeccCChhhHHHHHHHHHHHhcC-----CCCCcccee-e--EEEeCCeeEEEEEc
Q 017984          275 NKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGI-----NHKNLVKLL-G--CSITGPESLLVYEF  346 (363)
Q Consensus       275 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-----~h~niv~l~-~--~~~~~~~~~lv~Ey  346 (363)
                      ..|+.|....||+....+| .+++|+.... .   ..+..|..++..|     ..|.++.-. |  +....+..++||||
T Consensus        38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~-~---~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~  112 (346)
T 2q83_A           38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP-E---KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDW  112 (346)
T ss_dssp             EECC----CEEEEEEETTE-EEEEEEECSC-H---HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEEC
T ss_pred             eeccccccCcEEEEEeCCC-CEEEEecCCC-H---HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEe
Confidence            3465567889999887655 4889988652 2   2333455555443     234444311 1  12346678999999


Q ss_pred             cCCCChh
Q 017984          347 VPNQSLL  353 (363)
Q Consensus       347 ~~~gsL~  353 (363)
                      ++|..+.
T Consensus       113 i~G~~~~  119 (346)
T 2q83_A          113 IEGRPFE  119 (346)
T ss_dssp             CCCBCCC
T ss_pred             ecCccCC
Confidence            9987653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	363
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	5e-21
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	9e-21
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	2e-20
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	2e-20
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	8e-20
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	9e-20
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	1e-19
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	1e-19
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	2e-19
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	2e-19
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	8e-19
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	4e-18
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	4e-18
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	5e-18
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	1e-17
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	1e-17
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	1e-17
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	2e-17
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	3e-17
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	6e-17
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	9e-17
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	2e-16
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	3e-16
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	5e-16
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	5e-16
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	1e-15
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	2e-15
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	3e-15
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	3e-15
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	3e-15
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	3e-15
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	5e-15
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	8e-15
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	9e-15
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	9e-15
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	1e-14
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	2e-14
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	2e-14
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	3e-14
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	3e-14
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	5e-14
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	8e-14
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	9e-14
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	3e-13
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	1e-12
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	7e-12
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	1e-11
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	2e-11
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	5e-11
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	6e-11
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	9e-11
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	1e-10
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	1e-10
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	1e-10
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	4e-10
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	6e-10
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	2e-09
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	2e-09
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	3e-09
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	4e-09
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	8e-08
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	9e-08
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	3e-07

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.0 bits (220), Expect = 5e-21
 Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 1/90 (1%)

Query: 271 FHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKL 330
                ++G G  G V+ G     + VA+K +        + F  E  ++  ++H  LV+L
Sbjct: 7   LTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQL 65

Query: 331 LGCSITGPESLLVYEFVPNQSLLDNLFDKM 360
            G  +      LV+EF+ +  L D L  + 
Sbjct: 66  YGVCLEQAPICLVFEFMEHGCLSDYLRTQR 95

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.2 bits (218), Expect = 9e-21
 Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 1/90 (1%)

Query: 271 FHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKL 330
                +LG G  G V  G   G   VA+K +    +   D F  E  ++  ++H+ LV+L
Sbjct: 6   LTFLKELGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQL 64

Query: 331 LGCSITGPESLLVYEFVPNQSLLDNLFDKM 360
            G         ++ E++ N  LL+ L +  
Sbjct: 65  YGVCTKQRPIFIITEYMANGCLLNYLREMR 94

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 88.2 bits (218), Expect = 2e-20
 Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 2/101 (1%)

Query: 260 SYETLEKATNYFHESNKLGQGGSGSVYKGTLPG-GEAVAVKRLFYNTTQWVDHFFNEVNL 318
           +Y+  E         +KLG G  G VY+G        VAVK L  +T + V+ F  E  +
Sbjct: 8   NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 66

Query: 319 ISGINHKNLVKLLGCSITGPESLLVYEFVPNQSLLDNLFDK 359
           +  I H NLV+LLG     P   ++ EF+   +LLD L + 
Sbjct: 67  MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC 107

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 88.3 bits (218), Expect = 2e-20
 Identities = 27/116 (23%), Positives = 45/116 (38%), Gaps = 14/116 (12%)

Query: 259 FSYETLEKATNYFHES---------NKLGQGGSGSVYKGTLPG----GEAVAVKRLFYNT 305
           F++E   +A   F +            +G G  G V  G L         VA+K L    
Sbjct: 7   FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 66

Query: 306 T-QWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQSLLDNLFDKM 360
           T +    F +E +++   +H N++ L G        +++ EF+ N SL   L    
Sbjct: 67  TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQND 122

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 86.4 bits (213), Expect = 8e-20
 Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 7/110 (6%)

Query: 257 LNFSYETLEKATNYFHESNKLGQGGSGSVYKGTLPG------GEAVAVKRLFYNTTQWV- 309
           LN    +LE   N       +G+G  G V++   PG         VAVK L    +  + 
Sbjct: 1   LNPKLLSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQ 60

Query: 310 DHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQSLLDNLFDK 359
             F  E  L++  ++ N+VKLLG    G    L++E++    L + L   
Sbjct: 61  ADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSM 110

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.8 bits (212), Expect = 9e-20
 Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 1/85 (1%)

Query: 275 NKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCS 334
            ++G G  G+VYKG   G  AV +  +   T Q +  F NEV ++    H N++  +G S
Sbjct: 14  QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73

Query: 335 ITGPESLLVYEFVPNQSLLDNLFDK 359
            T P+  +V ++    SL  +L   
Sbjct: 74  -TAPQLAIVTQWCEGSSLYHHLHII 97

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 86.2 bits (213), Expect = 1e-19
 Identities = 20/96 (20%), Positives = 38/96 (39%), Gaps = 4/96 (4%)

Query: 268 TNYFHESNKLGQGGSGSVYKGT-LPGGEAVAVKRL---FYNTTQWVDHFFNEVNLISGIN 323
              F +  ++G G  G+VY    +   E VA+K++      + +       EV  +  + 
Sbjct: 14  EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR 73

Query: 324 HKNLVKLLGCSITGPESLLVYEFVPNQSLLDNLFDK 359
           H N ++  GC +    + LV E+    +       K
Sbjct: 74  HPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHK 109

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.1 bits (210), Expect = 1e-19
 Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 2/91 (2%)

Query: 269 NYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLV 328
                  +LG G  G V+ G   G   VAVK L   +    D F  E NL+  + H+ LV
Sbjct: 13  ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS-PDAFLAEANLMKQLQHQRLV 71

Query: 329 KLLGCSITGPESLLVYEFVPNQSLLDNLFDK 359
           +L       P   ++ E++ N SL+D L   
Sbjct: 72  RLYAVVTQEPI-YIITEYMENGSLVDFLKTP 101

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.9 bits (212), Expect = 2e-19
 Identities = 21/98 (21%), Positives = 39/98 (39%), Gaps = 2/98 (2%)

Query: 264 LEKATNYFHESNKLGQGGSGSVYKGT-LPGGEAVAVKRLFYNTTQWV-DHFFNEVNLISG 321
           +E   + F + ++LG G  G V+K +  P G  +A K +       + +    E+ ++  
Sbjct: 1   MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60

Query: 322 INHKNLVKLLGCSITGPESLLVYEFVPNQSLLDNLFDK 359
            N   +V   G   +  E  +  E +   SL   L   
Sbjct: 61  CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA 98

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.3 bits (208), Expect = 2e-19
 Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 4/94 (4%)

Query: 271 FHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKL 330
                 +G+G  G V  G   G + VAVK +          F  E ++++ + H NLV+L
Sbjct: 9   LKLLQTIGKGEFGDVMLGDYRGNK-VAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQL 65

Query: 331 LGCSITGPESL-LVYEFVPNQSLLDNLFDKMLSP 363
           LG  +     L +V E++   SL+D L  +  S 
Sbjct: 66  LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV 99

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.1 bits (205), Expect = 8e-19
 Identities = 21/103 (20%), Positives = 45/103 (43%), Gaps = 4/103 (3%)

Query: 261 YETLEKATN---YFHESNKLGQGGSGSVYKGT-LPGGEAVAVKRLFYNTTQWVDHFFNEV 316
           YE + +  N   ++    +LG G  G VYK          A K +   + + ++ +  E+
Sbjct: 1   YEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEI 60

Query: 317 NLISGINHKNLVKLLGCSITGPESLLVYEFVPNQSLLDNLFDK 359
           ++++  +H N+VKLL          ++ EF    ++   + + 
Sbjct: 61  DILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLEL 103

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.3 bits (200), Expect = 4e-18
 Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 2/101 (1%)

Query: 259 FSYETLEKATNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNL 318
            + +  E          KLGQG  G V+ GT  G   VA+K L    T   + F  E  +
Sbjct: 7   LAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQV 65

Query: 319 ISGINHKNLVKLLGCSITGPESLLVYEFVPNQSLLDNLFDK 359
           +  + H+ LV+L    ++     +V E++   SLLD L  +
Sbjct: 66  MKKLRHEKLVQLYAV-VSEEPIYIVTEYMSKGSLLDFLKGE 105

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.2 bits (200), Expect = 4e-18
 Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 1/90 (1%)

Query: 275 NKLGQGGSGSVYKGT-LPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGC 333
            K+GQG SG+VY    +  G+ VA++++        +   NE+ ++    + N+V  L  
Sbjct: 26  EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85

Query: 334 SITGPESLLVYEFVPNQSLLDNLFDKMLSP 363
            + G E  +V E++   SL D + +  +  
Sbjct: 86  YLVGDELWVVMEYLAGGSLTDVVTETCMDE 115

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.9 bits (199), Expect = 5e-18
 Identities = 24/98 (24%), Positives = 38/98 (38%), Gaps = 5/98 (5%)

Query: 266 KATNYFHESNKLGQGGSGSVYKGTL---PGGEAVAVKRLFYNTTQW-VDHFFNEVNLISG 321
           K  N      +LG G  GSV +G          VA+K L   T +   +    E  ++  
Sbjct: 6   KRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQ 65

Query: 322 INHKNLVKLLGCSITGPESLLVYEFVPNQSLLDNLFDK 359
           +++  +V+L+G        +LV E      L   L  K
Sbjct: 66  LDNPYIVRLIGV-CQAEALMLVMEMAGGGPLHKFLVGK 102

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 80.9 bits (199), Expect = 1e-17
 Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 1/85 (1%)

Query: 276 KLGQGGSGSVYKGT-LPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCS 334
           +LG G  G V++ T    G   A K +        +    E+  +S + H  LV L    
Sbjct: 33  ELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF 92

Query: 335 ITGPESLLVYEFVPNQSLLDNLFDK 359
               E +++YEF+    L + + D+
Sbjct: 93  EDDNEMVMIYEFMSGGELFEKVADE 117

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.8 bits (196), Expect = 1e-17
 Identities = 32/97 (32%), Positives = 45/97 (46%), Gaps = 8/97 (8%)

Query: 271 FHESNKLGQGGSGSVYKGTLPG----GEAVAVKRL---FYNTTQWVDHFFNEVNLISGIN 323
                KLG G  G V +G          +VAVK L     +  + +D F  EVN +  ++
Sbjct: 10  LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 69

Query: 324 HKNLVKLLGCSITGPESLLVYEFVPNQSLLDNLFDKM 360
           H+NL++L G  +T P   +V E  P  SLLD L    
Sbjct: 70  HRNLIRLYGVVLTPPM-KMVTELAPLGSLLDRLRKHQ 105

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.2 bits (197), Expect = 1e-17
 Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 9/119 (7%)

Query: 250 VAVNKSKLNFSYETLEKATNYFHESNKLGQGGSGSVYKGTLPG------GEAVAVKRLFY 303
           V ++ ++L + ++  E   N       LG G  G V + T  G         VAVK L  
Sbjct: 5   VYIDPTQLPYDHK-WEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKP 63

Query: 304 NTTQW-VDHFFNEVNLISGI-NHKNLVKLLGCSITGPESLLVYEFVPNQSLLDNLFDKM 360
           +      +   +E+ ++S + NH N+V LLG    G  +L++ E+     LL+ L  K 
Sbjct: 64  SAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKR 122

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 79.7 bits (196), Expect = 2e-17
 Identities = 21/101 (20%), Positives = 39/101 (38%), Gaps = 2/101 (1%)

Query: 261 YETLEKATNYFHESNKLGQGGSGSVYKGT-LPGGEAVAVKRLFYNTTQW-VDHFFNEVNL 318
           ++  E   + +   + LG G    V         + VA+K +     +       NE+ +
Sbjct: 1   WKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAV 60

Query: 319 ISGINHKNLVKLLGCSITGPESLLVYEFVPNQSLLDNLFDK 359
           +  I H N+V L     +G    L+ + V    L D + +K
Sbjct: 61  LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEK 101

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.6 bits (193), Expect = 3e-17
 Identities = 23/92 (25%), Positives = 36/92 (39%), Gaps = 6/92 (6%)

Query: 273 ESNKLGQGGSGSVYKGTLPG---GEAVAVKRLFYNTTQ--WVDHFFNEVNLISGINHKNL 327
           E  +LG G  G+V KG        + VAVK L          D    E N++  +++  +
Sbjct: 11  EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 70

Query: 328 VKLLGCSITGPESLLVYEFVPNQSLLDNLFDK 359
           V+++G        +LV E      L   L   
Sbjct: 71  VRMIGI-CEAESWMLVMEMAELGPLNKYLQQN 101

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.3 bits (192), Expect = 6e-17
 Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 6/91 (6%)

Query: 270 YFHESNKLGQGGSGSVYKGTLPG----GEAVAVKRLFYNTTQ-WVDHFFNEVNLISGINH 324
             H +  +G+G  G VY GTL          AVK L   T    V  F  E  ++   +H
Sbjct: 28  IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 87

Query: 325 KNLVKLLGCSITGPES-LLVYEFVPNQSLLD 354
            N++ LLG  +    S L+V  ++ +  L +
Sbjct: 88  PNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 118

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.9 bits (191), Expect = 9e-17
 Identities = 23/96 (23%), Positives = 41/96 (42%), Gaps = 5/96 (5%)

Query: 271 FHESNKLGQGGSGSVYKGTLPGG---EAVAVKRL-FYNTTQWVDHFFNEVNLISGI-NHK 325
               + +G+G  G V K  +         A+KR+  Y +      F  E+ ++  + +H 
Sbjct: 12  IKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHP 71

Query: 326 NLVKLLGCSITGPESLLVYEFVPNQSLLDNLFDKML 361
           N++ LLG         L  E+ P+ +LLD L    +
Sbjct: 72  NIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRV 107

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.7 bits (188), Expect = 2e-16
 Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 8/92 (8%)

Query: 276 KLGQGGSGSVYKGTLPG------GEAVAVKRLFYNTTQ-WVDHFFNEVNLISGI-NHKNL 327
            LG G  G V   T  G         VAVK L         +   +E+ +++ + +H+N+
Sbjct: 44  VLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENI 103

Query: 328 VKLLGCSITGPESLLVYEFVPNQSLLDNLFDK 359
           V LLG         L++E+     LL+ L  K
Sbjct: 104 VNLLGACTLSGPIYLIFEYCCYGDLLNYLRSK 135

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.8 bits (186), Expect = 3e-16
 Identities = 19/92 (20%), Positives = 31/92 (33%), Gaps = 4/92 (4%)

Query: 271 FHESNKLGQGGSGSVYKGT-LPGGEAVAVKRL---FYNTTQWVDHFFNEVNLISGINHKN 326
           F     LG+G   +V     L      A+K L          V +   E +++S ++H  
Sbjct: 10  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 69

Query: 327 LVKLLGCSITGPESLLVYEFVPNQSLLDNLFD 358
            VKL        +      +  N  LL  +  
Sbjct: 70  FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK 101

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.7 bits (185), Expect = 5e-16
 Identities = 26/96 (27%), Positives = 41/96 (42%), Gaps = 7/96 (7%)

Query: 271 FHESNKLGQGGSGSVYKGTLPG------GEAVAVKRLFYNTTQW-VDHFFNEVNLISGIN 323
              S +LGQG  G VY+G   G         VA+K +    +      F NE +++   N
Sbjct: 22  ITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFN 81

Query: 324 HKNLVKLLGCSITGPESLLVYEFVPNQSLLDNLFDK 359
             ++V+LLG    G  +L++ E +    L   L   
Sbjct: 82  CHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSL 117

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 75.9 bits (186), Expect = 5e-16
 Identities = 18/85 (21%), Positives = 35/85 (41%), Gaps = 1/85 (1%)

Query: 276 KLGQGGSGSVYKGT-LPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCS 334
           +LG G  G V++      G     K +            NE+++++ ++H  L+ L    
Sbjct: 36  ELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAF 95

Query: 335 ITGPESLLVYEFVPNQSLLDNLFDK 359
               E +L+ EF+    L D +  +
Sbjct: 96  EDKYEMVLILEFLSGGELFDRIAAE 120

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.9 bits (181), Expect = 1e-15
 Identities = 21/97 (21%), Positives = 37/97 (38%), Gaps = 7/97 (7%)

Query: 270 YFHESNKLGQGGSGSVYKGTLPG-GEAVAVKRLF--YNTTQWVDHFFNEVNLISGINHKN 326
           +     ++G+G   +VYKG        VA   L     T      F  E  ++ G+ H N
Sbjct: 10  FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPN 69

Query: 327 LVKLLGCSITGPES----LLVYEFVPNQSLLDNLFDK 359
           +V+      +  +     +LV E + + +L   L   
Sbjct: 70  IVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRF 106

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.5 bits (180), Expect = 2e-15
 Identities = 23/91 (25%), Positives = 35/91 (38%), Gaps = 2/91 (2%)

Query: 271 FHESNKLGQGGSGSVYKGT-LPGGEAVAVKRL-FYNTTQWVDHFFNEVNLISGINHKNLV 328
           +     LG+G  G V         EAVAVK +         ++   E+ +   +NH+N+V
Sbjct: 7   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 66

Query: 329 KLLGCSITGPESLLVYEFVPNQSLLDNLFDK 359
           K  G    G    L  E+     L D +   
Sbjct: 67  KFYGHRREGNIQYLFLEYCSGGELFDRIEPD 97

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.9 bits (178), Expect = 3e-15
 Identities = 26/104 (25%), Positives = 43/104 (41%), Gaps = 6/104 (5%)

Query: 263 TLEKATNYFHESNKLGQGGSGSVYKGTLPGGE-----AVAVKRLFYNTTQW-VDHFFNEV 316
           T E   +       +G G  G VYKG L          VA+K L    T+     F  E 
Sbjct: 1   TTEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEA 60

Query: 317 NLISGINHKNLVKLLGCSITGPESLLVYEFVPNQSLLDNLFDKM 360
            ++   +H N+++L G        +++ E++ N +L   L +K 
Sbjct: 61  GIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKD 104

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.9 bits (178), Expect = 3e-15
 Identities = 23/90 (25%), Positives = 38/90 (42%), Gaps = 6/90 (6%)

Query: 276 KLGQGGSGSVYKGTLPG----GEAVAVKRLFYNTTQWV-DHFFNEVNLISGINHKNLVKL 330
            +G+G  G V++G          AVA+K     T+  V + F  E   +   +H ++VKL
Sbjct: 14  CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 73

Query: 331 LGCSITGPESLLVYEFVPNQSLLDNLFDKM 360
           +G  IT     ++ E      L   L  + 
Sbjct: 74  IGV-ITENPVWIIMELCTLGELRSFLQVRK 102

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.9 bits (178), Expect = 3e-15
 Identities = 24/108 (22%), Positives = 40/108 (37%), Gaps = 10/108 (9%)

Query: 259 FSYETLEKATNYFHESNKLGQGGSGSVYKGT-LPGGEAVAVKRL------FYNTTQWVDH 311
           F  E ++   +Y+    +LG G    V K      G   A K +              + 
Sbjct: 3   FRQENVD---DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED 59

Query: 312 FFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQSLLDNLFDK 359
              EV+++  I H N++ L        + +L+ E V    L D L +K
Sbjct: 60  IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK 107

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 73.6 bits (180), Expect = 3e-15
 Identities = 20/98 (20%), Positives = 34/98 (34%), Gaps = 7/98 (7%)

Query: 269 NYFHESNKLGQGGSGSVYKGTLPG-GEAVAVKRL---FYNTTQWVDHFFNEVNLIS---G 321
           N F     +G+GG G VY       G+  A+K L        Q      NE  ++S    
Sbjct: 4   NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 63

Query: 322 INHKNLVKLLGCSITGPESLLVYEFVPNQSLLDNLFDK 359
            +   +V +     T  +   + + +    L  +L   
Sbjct: 64  GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQH 101

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.9 bits (176), Expect = 5e-15
 Identities = 21/92 (22%), Positives = 34/92 (36%), Gaps = 4/92 (4%)

Query: 271 FHESNKLGQGGSGSVYKGTLP-GGEAVAVKRL---FYNTTQWVDHFFNEVNLISGINHKN 326
           F     LG+G  G+VY          +A+K L                EV + S + H N
Sbjct: 8   FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 67

Query: 327 LVKLLGCSITGPESLLVYEFVPNQSLLDNLFD 358
           +++L G         L+ E+ P  ++   L  
Sbjct: 68  ILRLYGYFHDATRVYLILEYAPLGTVYRELQK 99

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 71.8 bits (175), Expect = 8e-15
 Identities = 22/91 (24%), Positives = 38/91 (41%), Gaps = 2/91 (2%)

Query: 271 FHESNKLGQGGSGSVYKGTLPGGEAVAVKRLF--YNTTQWVDHFFNEVNLISGINHKNLV 328
           +H   K+G+G  G VYK     GE  A+K++               E++++  + H N+V
Sbjct: 4   YHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIV 63

Query: 329 KLLGCSITGPESLLVYEFVPNQSLLDNLFDK 359
           KL     T    +LV+E +           +
Sbjct: 64  KLYDVIHTKKRLVLVFEHLDQDLKKLLDVCE 94

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.2 bits (174), Expect = 9e-15
 Identities = 22/99 (22%), Positives = 36/99 (36%), Gaps = 6/99 (6%)

Query: 266 KATNYFHESNKLGQGGSGSVYKGT-LPGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGI 322
           +A +Y      +G G  G   K      G+ +  K L Y   T        +EVNL+  +
Sbjct: 2   RAEDY-EVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL 60

Query: 323 NHKNLVKLLGCSITGPESL--LVYEFVPNQSLLDNLFDK 359
            H N+V+     I    +   +V E+     L   +   
Sbjct: 61  KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKG 99

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 71.3 bits (174), Expect = 9e-15
 Identities = 23/97 (23%), Positives = 36/97 (37%), Gaps = 8/97 (8%)

Query: 268 TNYFHESNKLGQGGSGSVYKGT-LPGGEAVAVKRL---FYNTTQWVDHFFNEVNLISGIN 323
           ++ +     LG GG   V+    L     VAVK L         +   F  E    + +N
Sbjct: 6   SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 65

Query: 324 HKNLVKLLGCSIT----GPESLLVYEFVPNQSLLDNL 356
           H  +V +          GP   +V E+V   +L D +
Sbjct: 66  HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV 102

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.4 bits (174), Expect = 1e-14
 Identities = 22/93 (23%), Positives = 41/93 (44%), Gaps = 8/93 (8%)

Query: 276 KLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFF-NEVNLISGINHKNLVKLLGCS 334
            +G+G  G V++G   G E VAVK    ++ +    F   E+     + H+N++  +   
Sbjct: 10  SIGKGRFGEVWRGKWRG-EEVAVKIF--SSREERSWFREAEIYQTVMLRHENILGFIAAD 66

Query: 335 I----TGPESLLVYEFVPNQSLLDNLFDKMLSP 363
                T  +  LV ++  + SL D L    ++ 
Sbjct: 67  NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTV 99

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.7 bits (172), Expect = 2e-14
 Identities = 18/86 (20%), Positives = 35/86 (40%), Gaps = 6/86 (6%)

Query: 275 NKLGQGGSGSVYKGTLPG-GEAVAVKRLFYNTTQWVD-----HFFNEVNLISGINHKNLV 328
           + LG+G   +VYK       + VA+K++                  E+ L+  ++H N++
Sbjct: 4   DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 63

Query: 329 KLLGCSITGPESLLVYEFVPNQSLLD 354
            LL          LV++F+     + 
Sbjct: 64  GLLDAFGHKSNISLVFDFMETDLEVI 89

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.8 bits (173), Expect = 2e-14
 Identities = 14/85 (16%), Positives = 36/85 (42%), Gaps = 2/85 (2%)

Query: 276 KLGQGGSGSVYKGT-LPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCS 334
            LG+G  G V++       +    K +    T        E+++++   H+N++ L    
Sbjct: 12  DLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTD-QVLVKKEISILNIARHRNILHLHESF 70

Query: 335 ITGPESLLVYEFVPNQSLLDNLFDK 359
            +  E ++++EF+    + + +   
Sbjct: 71  ESMEELVMIFEFISGLDIFERINTS 95

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 70.1 bits (171), Expect = 3e-14
 Identities = 19/97 (19%), Positives = 37/97 (38%), Gaps = 4/97 (4%)

Query: 271 FHESNKLGQGGSGSVYKGT-LPGGEAVAVKRL---FYNTTQWVDHFFNEVNLISGINHKN 326
           F     LG G  G V+       G   A+K L        + V+H  +E  ++S + H  
Sbjct: 6   FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPF 65

Query: 327 LVKLLGCSITGPESLLVYEFVPNQSLLDNLFDKMLSP 363
           ++++ G      +  ++ +++    L   L      P
Sbjct: 66  IIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFP 102

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.2 bits (171), Expect = 3e-14
 Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 7/95 (7%)

Query: 271 FHESNKLGQGGSGSVYKGT-LPGGE----AVAVKRLFYNTT-QWVDHFFNEVNLISGINH 324
           F +   LG G  G+VYKG  +P GE     VA+K L   T+ +      +E  +++ +++
Sbjct: 11  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70

Query: 325 KNLVKLLGCSITGPESLLVYEFVPNQSLLDNLFDK 359
            ++ +LLG  +T     L+ + +P   LLD + + 
Sbjct: 71  PHVCRLLGICLTSTV-QLITQLMPFGCLLDYVREH 104

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.9 bits (170), Expect = 5e-14
 Identities = 11/95 (11%), Positives = 34/95 (35%), Gaps = 2/95 (2%)

Query: 268 TNYFHESNKLGQGGSGSVYKGT-LPGGEAVAVKRL-FYNTTQWVDHFFNEVNLISGINHK 325
              +   + +G+G  G V           VA+K++  +    +      E+ ++    H+
Sbjct: 7   GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 66

Query: 326 NLVKLLGCSITGPESLLVYEFVPNQSLLDNLFDKM 360
           N++ +           +   ++    +  +L+  +
Sbjct: 67  NIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLL 101

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.7 bits (167), Expect = 8e-14
 Identities = 23/99 (23%), Positives = 39/99 (39%), Gaps = 10/99 (10%)

Query: 275 NKLGQGGSGSVYKGTLPG--------GEAVAVKRLFYNTTQW-VDHFFNEVNLISGI-NH 324
             LG+G  G V      G           VAVK L  + T+  +    +E+ ++  I  H
Sbjct: 19  KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 78

Query: 325 KNLVKLLGCSITGPESLLVYEFVPNQSLLDNLFDKMLSP 363
           KN++ LLG         ++ E+    +L + L  +    
Sbjct: 79  KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPG 117

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.1 bits (168), Expect = 9e-14
 Identities = 19/113 (16%), Positives = 43/113 (38%), Gaps = 7/113 (6%)

Query: 256 KLNFSYETLEKAT----NYFHESNKLGQGGSGSVYKGT-LPGGEAVAVKRLF--YNTTQW 308
           +  F  + + K        + +   +G G  G+V        G  VA+K+L+  + +  +
Sbjct: 1   RSGFYRQEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELF 60

Query: 309 VDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPNQSLLDNLFDKML 361
               + E+ L+  + H+N++ LL             +F      +     K++
Sbjct: 61  AKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLM 113

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.2 bits (163), Expect = 3e-13
 Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 3/86 (3%)

Query: 271 FHESNKLGQGGSGSVYKGT-LPGGEAVAVK--RLFYNTTQWVDHFFNEVNLISGINHKNL 327
           F +  K+G+G  G VYK      GE VA+K  RL   T         E++L+  +NH N+
Sbjct: 4   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63

Query: 328 VKLLGCSITGPESLLVYEFVPNQSLL 353
           VKLL    T  +  LV+EF+      
Sbjct: 64  VKLLDVIHTENKLYLVFEFLHQDLKK 89

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.6 bits (159), Expect = 1e-12
 Identities = 22/89 (24%), Positives = 40/89 (44%), Gaps = 11/89 (12%)

Query: 271 FHESNKLGQGGSGSVYKGTLPG-GEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVK 329
           + ++  +G G  G VY+  L   GE VA+K++     Q       E+ ++  ++H N+V+
Sbjct: 22  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIVR 77

Query: 330 LLGCSITGPES------LLVYEFVPNQSL 352
           L     +  E        LV ++VP    
Sbjct: 78  LRYFFYSSGEKKDEVYLNLVLDYVPETVY 106

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.2 bits (153), Expect = 7e-12
 Identities = 18/94 (19%), Positives = 31/94 (32%), Gaps = 5/94 (5%)

Query: 271 FHESNKLGQGGSGSVYKGT-LPGGEAVAVKRL---FYNTTQWVDHFFNEVNLIS-GINHK 325
           F     LG+G  G V+        +  A+K L          V+    E  ++S    H 
Sbjct: 4   FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 63

Query: 326 NLVKLLGCSITGPESLLVYEFVPNQSLLDNLFDK 359
            L  +     T      V E++    L+ ++   
Sbjct: 64  FLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSC 97

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 62.0 bits (150), Expect = 1e-11
 Identities = 21/100 (21%), Positives = 40/100 (40%), Gaps = 11/100 (11%)

Query: 271 FHESNKLGQGGSGSVYKGT-LPGGEAVAVKRLFYNTT---------QWVDHFFNEVNLIS 320
           +     LG+G S  V +    P  +  AVK +              +  +    EV+++ 
Sbjct: 5   YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 64

Query: 321 GIN-HKNLVKLLGCSITGPESLLVYEFVPNQSLLDNLFDK 359
            ++ H N+++L     T     LV++ +    L D L +K
Sbjct: 65  KVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK 104

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.5 bits (148), Expect = 2e-11
 Identities = 22/92 (23%), Positives = 39/92 (42%), Gaps = 3/92 (3%)

Query: 271 FHESNKLGQGGSGSVYKGT-LPGGEAVAVKRLFY--NTTQWVDHFFNEVNLISGINHKNL 327
           + +  K+G+G  G+V+K       E VA+KR+    +          E+ L+  + HKN+
Sbjct: 4   YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI 63

Query: 328 VKLLGCSITGPESLLVYEFVPNQSLLDNLFDK 359
           V+L     +  +  LV+EF             
Sbjct: 64  VRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCN 95

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.0 bits (147), Expect = 5e-11
 Identities = 21/97 (21%), Positives = 29/97 (29%), Gaps = 4/97 (4%)

Query: 271 FHESNKLGQGGSGSVYKGT-LPGGEAVAVKRL---FYNTTQWVDHFFNEVNLISGINHKN 326
           F     LG+G  G V        G   A+K L          V H   E  ++    H  
Sbjct: 7   FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66

Query: 327 LVKLLGCSITGPESLLVYEFVPNQSLLDNLFDKMLSP 363
           L  L     T      V E+     L  +L  + +  
Sbjct: 67  LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFT 103

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.1 bits (145), Expect = 6e-11
 Identities = 20/93 (21%), Positives = 34/93 (36%), Gaps = 9/93 (9%)

Query: 276 KLGQGGSGSVYKGT-LPGGEAVAVKRLF------YNTTQWVDHFFNEVNLISGIN--HKN 326
            LG GG GSVY G  +     VA+K +       +           EV L+  ++     
Sbjct: 11  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70

Query: 327 LVKLLGCSITGPESLLVYEFVPNQSLLDNLFDK 359
           +++LL         +L+ E       L +   +
Sbjct: 71  VIRLLDWFERPDSFVLILERPEPVQDLFDFITE 103

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 60.2 bits (145), Expect = 9e-11
 Identities = 26/131 (19%), Positives = 48/131 (36%), Gaps = 15/131 (11%)

Query: 233 RKLLQKRRERKQLGALQVAVNKSKLNFSYETLEKATNYFHESNKLGQGGSGSVYKGT-LP 291
           ++ L K +E         + N ++L+  ++ ++           LG G  G V       
Sbjct: 16  KEFLAKAKEDFLKKWETPSQNTAQLD-QFDRIKT----------LGTGSFGRVMLVKHKE 64

Query: 292 GGEAVAVKRL---FYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVP 348
            G   A+K L        + ++H  NE  ++  +N   LVKL           +V E+V 
Sbjct: 65  SGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVA 124

Query: 349 NQSLLDNLFDK 359
              +  +L   
Sbjct: 125 GGEMFSHLRRI 135

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 59.5 bits (143), Expect = 1e-10
 Identities = 19/86 (22%), Positives = 31/86 (36%), Gaps = 4/86 (4%)

Query: 276 KLGQGGSGSVYKGT-LPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLG-C 333
           K+G G  G +Y GT +  GE VA+K     T         E  +   +     +  +  C
Sbjct: 14  KIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIPTIRWC 71

Query: 334 SITGPESLLVYEFVPNQSLLDNLFDK 359
              G  +++V E +         F  
Sbjct: 72  GAEGDYNVMVMELLGPSLEDLFNFCS 97

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.5 bits (143), Expect = 1e-10
 Identities = 24/94 (25%), Positives = 35/94 (37%), Gaps = 9/94 (9%)

Query: 275 NKLGQGGSGSVYKGTLPG------GEAVAVKRLFYNTTQW-VDHFFNEVNLISGINHKNL 327
             LG+G  G V +    G         VAVK L    T        +E+ ++  I H   
Sbjct: 19  KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 78

Query: 328 VKLLG--CSITGPESLLVYEFVPNQSLLDNLFDK 359
           V  L   C+  G   +++ EF    +L   L  K
Sbjct: 79  VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK 112

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.5 bits (143), Expect = 1e-10
 Identities = 20/87 (22%), Positives = 38/87 (43%), Gaps = 6/87 (6%)

Query: 254 KSKLNFSYETLEKATNYFHESNKLGQGGSGSVYKGT-LPGGEAVAVKRLF--YNTTQWVD 310
           + +LN   +T+ +    +   + +G G  GSV        G  VAVK+L   + +     
Sbjct: 6   RQELN---KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 62

Query: 311 HFFNEVNLISGINHKNLVKLLGCSITG 337
             + E+ L+  + H+N++ LL      
Sbjct: 63  RTYRELRLLKHMKHENVIGLLDVFTPA 89

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.0 bits (139), Expect = 4e-10
 Identities = 20/100 (20%), Positives = 39/100 (39%), Gaps = 11/100 (11%)

Query: 271 FHESNKLGQGGSGSVYKGT-LPGGEAVAVKRLF--YNTTQWVDHFFNEVNLISGINHKNL 327
           + +  K+GQG  G V+K      G+ VA+K++        +      E+ ++  + H+N+
Sbjct: 12  YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV 71

Query: 328 VKLLGCSITGPES--------LLVYEFVPNQSLLDNLFDK 359
           V L+    T             LV++F  +          
Sbjct: 72  VNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL 111

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.4 bits (138), Expect = 6e-10
 Identities = 20/101 (19%), Positives = 33/101 (32%), Gaps = 11/101 (10%)

Query: 269 NYFHESNKLGQGGSGSVYKGT-LPGGEAVAVKRLFYNTTQWVDHFFNEVN-LISGINHKN 326
           +Y   S  LG G +G V +       E  A+K L     Q       EV          +
Sbjct: 12  DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML-----QDCPKARREVELHWRASQCPH 66

Query: 327 LVKLLGCSITGPES----LLVYEFVPNQSLLDNLFDKMLSP 363
           +V+++             L+V E +    L   + D+    
Sbjct: 67  IVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQA 107

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.0 bits (134), Expect = 2e-09
 Identities = 19/94 (20%), Positives = 35/94 (37%), Gaps = 7/94 (7%)

Query: 266 KATNYFHESNKLGQGGSGSVYKGT--LPGGEAVAVKRLFYNTTQ--WVDHFFNEVNL--- 318
           +A   +    ++G+G  G V+K      GG  VA+KR+   T +         EV +   
Sbjct: 4   RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRH 63

Query: 319 ISGINHKNLVKLLGCSITGPESLLVYEFVPNQSL 352
           +    H N+V+L                +  + +
Sbjct: 64  LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV 97

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.6 bits (133), Expect = 2e-09
 Identities = 19/98 (19%), Positives = 33/98 (33%), Gaps = 9/98 (9%)

Query: 275 NKLGQGGSGSVYKGTLPG----GEAVAVKRL----FYNTTQWVDHFFNEVNLISGINHK- 325
             LG G  G V+          G+  A+K L         +  +H   E  ++  I    
Sbjct: 30  KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSP 89

Query: 326 NLVKLLGCSITGPESLLVYEFVPNQSLLDNLFDKMLSP 363
            LV L     T  +  L+ +++    L  +L  +    
Sbjct: 90  FLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFT 127

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.3 bits (132), Expect = 3e-09
 Identities = 19/91 (20%), Positives = 32/91 (35%), Gaps = 9/91 (9%)

Query: 271 FHESNKLGQGGSGSVYKGT-LPGGEAVAVKRLF--YNTTQWVDHFFNEVNLISGINHKNL 327
           +     +G G  G V           VA+K+L   +         + E+ L+  +NHKN+
Sbjct: 19  YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 78

Query: 328 VKLLGCSIT------GPESLLVYEFVPNQSL 352
           + LL             +  LV E +     
Sbjct: 79  ISLLNVFTPQKTLEEFQDVYLVMELMDANLC 109

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 55.2 bits (132), Expect = 4e-09
 Identities = 21/113 (18%), Positives = 38/113 (33%), Gaps = 10/113 (8%)

Query: 249 QVAVNKSKLNFSYETLEKATNY---FHESNKLGQGGSGSVYKGT-LPGGEAVAVKRLFYN 304
            V  ++ +  + YE+          +    KLG+G    V++   +   E V VK L   
Sbjct: 12  DVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKIL--- 68

Query: 305 TTQWVDHFFNEVNLISGIN-HKNLVKLLGCSITGPESL--LVYEFVPNQSLLD 354
                     E+ ++  +    N++ L             LV+E V N     
Sbjct: 69  KPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQ 121

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 49.8 bits (118), Expect = 8e-08
 Identities = 14/86 (16%), Positives = 26/86 (30%), Gaps = 14/86 (16%)

Query: 275 NKLGQGGSGSVYKGTLPGGEAVAVKRL------FYNTTQWVD----HFFNEVNLISGINH 324
             +G+G   +V+           VK        F    +  D    HF       +    
Sbjct: 6   KLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEF 65

Query: 325 KNLVKLLGCSITGP----ESLLVYEF 346
           + L KL G ++        + ++ E 
Sbjct: 66  RALQKLQGLAVPKVYAWEGNAVLMEL 91

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 51.2 bits (121), Expect = 9e-08
 Identities = 14/79 (17%), Positives = 29/79 (36%), Gaps = 2/79 (2%)

Query: 276 KLGQGGSGSVYKGT-LPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCS 334
           KLG G   +V+    +     VA+K +      + +   +E+ L+  +N  +  K     
Sbjct: 20  KLGWGHFSTVWLAKDMVNNTHVAMKIV-RGDKVYTEAAEDEIKLLQRVNDADNTKEDSMG 78

Query: 335 ITGPESLLVYEFVPNQSLL 353
                 LL +      + +
Sbjct: 79  ANHILKLLDHFNHKGPNGV 97

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 49.4 bits (117), Expect = 3e-07
 Identities = 13/76 (17%), Positives = 29/76 (38%), Gaps = 4/76 (5%)

Query: 276 KLGQGGSGSVYKGT-LPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINH-KNLVKLLGC 333
           ++G+G  G +++GT L   + VA+K              +E      +     +  +   
Sbjct: 12  RIGEGSFGVIFEGTNLLNNQQVAIKFE--PRRSDAPQLRDEYRTYKLLAGCTGIPNVYYF 69

Query: 334 SITGPESLLVYEFVPN 349
              G  ++LV + +  
Sbjct: 70  GQEGLHNVLVIDLLGP 85

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	363
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.69
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.69
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.68
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.68
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.67
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.67
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.66
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.66
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.65
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.65
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.65
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.65
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.65
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.64
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.64
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.64
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.63
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.63
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.63
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.62
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.62
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.61
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.61
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.6
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.6
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.6
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.58
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.58
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.58
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.57
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.56
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.56
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.55
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.55
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.55
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.55
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.54
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.51
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.51
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.5
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.5
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.49
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.48
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.47
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.47
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.47
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.46
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.46
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.4
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.38
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.38
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.38
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.37
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.37
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.35
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.34
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.32
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.28
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.21
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.19
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.11
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	98.64
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	98.55
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	95.13
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	91.55

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=3.3e-17  Score=146.16  Aligned_cols=94  Identities=24%  Similarity=0.424  Sum_probs=84.0

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEc
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      .++|...+.||+|+||.||++.. .+|+.||||++........+.+.+|+.+|++++|||||++++++.+++..||||||
T Consensus        19 ~~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy   98 (293)
T d1yhwa1          19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY   98 (293)
T ss_dssp             TTTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             ccccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEe
Confidence            35689999999999999999996 56999999999765444567799999999999999999999999999999999999


Q ss_pred             cCCCChhHHhhcCCC
Q 017984          347 VPNQSLLDNLFDKML  361 (363)
Q Consensus       347 ~~~gsL~~~l~~~~~  361 (363)
                      +++|+|.+++.++.+
T Consensus        99 ~~gg~L~~~~~~~~l  113 (293)
T d1yhwa1          99 LAGGSLTDVVTETCM  113 (293)
T ss_dssp             CTTCBHHHHHHHSCC
T ss_pred             cCCCcHHHHhhccCC
Confidence            999999999877654

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=1.8e-17  Score=145.77  Aligned_cols=91  Identities=24%  Similarity=0.354  Sum_probs=81.5

Q ss_pred             cCCCcCceecccCceEEEEEEcCCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEccC
Q 017984          269 NYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVP  348 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~~  348 (363)
                      ++|...+.||+|+||.||+|.+.+++.||||+++... ...++|.+|+.++.+++|||||+++|++..++..+|||||++
T Consensus         5 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~   83 (263)
T d1sm2a_           5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME   83 (263)
T ss_dssp             SCEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred             HHcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCCc-CcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEecC
Confidence            4677888999999999999999888899999997543 335679999999999999999999999999999999999999


Q ss_pred             CCChhHHhhcCC
Q 017984          349 NQSLLDNLFDKM  360 (363)
Q Consensus       349 ~gsL~~~l~~~~  360 (363)
                      +|+|.+++....
T Consensus        84 ~g~L~~~l~~~~   95 (263)
T d1sm2a_          84 HGCLSDYLRTQR   95 (263)
T ss_dssp             TCBHHHHHHTTT
T ss_pred             CCcHHHHhhccc
Confidence            999999987653

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=3.2e-17  Score=144.70  Aligned_cols=93  Identities=25%  Similarity=0.329  Sum_probs=79.5

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNT-TQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYE  345 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  345 (363)
                      .++|...+.||+|+||.||++.. .+|+.||||++.... .+..+.|.+|+.+|++++|||||++++++.+++..|||||
T Consensus         4 ~~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmE   83 (271)
T d1nvra_           4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE   83 (271)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CcceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEe
Confidence            35688899999999999999996 568999999997542 3334569999999999999999999999999999999999


Q ss_pred             ccCCCChhHHhhcCC
Q 017984          346 FVPNQSLLDNLFDKM  360 (363)
Q Consensus       346 y~~~gsL~~~l~~~~  360 (363)
                      |+++|+|.++|..+.
T Consensus        84 y~~gg~L~~~l~~~~   98 (271)
T d1nvra_          84 YCSGGELFDRIEPDI   98 (271)
T ss_dssp             CCTTEEGGGGSBTTT
T ss_pred             ccCCCcHHHHHhcCC
Confidence            999999999997654

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=4.3e-17  Score=142.84  Aligned_cols=90  Identities=26%  Similarity=0.385  Sum_probs=81.3

Q ss_pred             cCCCcCceecccCceEEEEEEcCCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEccC
Q 017984          269 NYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVP  348 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~~  348 (363)
                      ++|...+.||+|+||.||+|++++++.||||+++.... ..++|.+|+.++.+++|||||+++|++.+++.+++||||++
T Consensus         4 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~-~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~   82 (258)
T d1k2pa_           4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMA   82 (258)
T ss_dssp             CCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSSS-CHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECCT
T ss_pred             HHCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcCcC-CHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEccC
Confidence            57889999999999999999998888999999976433 35679999999999999999999999999999999999999


Q ss_pred             CCChhHHhhcC
Q 017984          349 NQSLLDNLFDK  359 (363)
Q Consensus       349 ~gsL~~~l~~~  359 (363)
                      +|+|.+++...
T Consensus        83 ~g~l~~~~~~~   93 (258)
T d1k2pa_          83 NGCLLNYLREM   93 (258)
T ss_dssp             TEEHHHHHHSG
T ss_pred             CCcHHHhhhcc
Confidence            99999987654

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=2.8e-17  Score=146.41  Aligned_cols=91  Identities=20%  Similarity=0.371  Sum_probs=82.4

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEc
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      .+.|...+.||+|+||.||++.. .+|+.||||+++.......+.|.+|+++|++++|||||++++++.+++..+|||||
T Consensus        11 ~d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy   90 (288)
T d2jfla1          11 EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEF   90 (288)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             ccCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEec
Confidence            35678889999999999999996 56899999999876666667899999999999999999999999999999999999


Q ss_pred             cCCCChhHHhhc
Q 017984          347 VPNQSLLDNLFD  358 (363)
Q Consensus       347 ~~~gsL~~~l~~  358 (363)
                      +++|+|.+++.+
T Consensus        91 ~~~g~L~~~~~~  102 (288)
T d2jfla1          91 CAGGAVDAVMLE  102 (288)
T ss_dssp             CTTEEHHHHHHH
T ss_pred             CCCCcHHHHHHh
Confidence            999999999764

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=8.3e-17  Score=143.79  Aligned_cols=93  Identities=24%  Similarity=0.312  Sum_probs=81.8

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC------ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCee
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN------TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPES  340 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~------~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  340 (363)
                      .+.|...+.||+|+||.||++.. .+|+.||||+++..      .....+.|.+|+.+|++++|||||++++++.+.+.+
T Consensus         9 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~   88 (293)
T d1jksa_           9 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV   88 (293)
T ss_dssp             GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             ccCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEE
Confidence            35688999999999999999996 56899999999643      112357899999999999999999999999999999


Q ss_pred             EEEEEccCCCChhHHhhcCC
Q 017984          341 LLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       341 ~lv~Ey~~~gsL~~~l~~~~  360 (363)
                      +|||||+++|+|.++|.++.
T Consensus        89 ~iv~E~~~gg~L~~~i~~~~  108 (293)
T d1jksa_          89 ILILELVAGGELFDFLAEKE  108 (293)
T ss_dssp             EEEEECCCSCBHHHHHHHHS
T ss_pred             EEEEEcCCCccccchhcccc
Confidence            99999999999999997643

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.66  E-value=1.2e-16  Score=146.08  Aligned_cols=92  Identities=23%  Similarity=0.337  Sum_probs=83.7

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEc
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      .++|...+.||+|+||.||++.. .+|+.||||++........+.+.+|+.+|.+++|||||++++++.+++.++|||||
T Consensus        25 l~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~  104 (350)
T d1koaa2          25 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF  104 (350)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             ccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence            35788999999999999999996 56899999999876666677899999999999999999999999999999999999


Q ss_pred             cCCCChhHHhhcC
Q 017984          347 VPNQSLLDNLFDK  359 (363)
Q Consensus       347 ~~~gsL~~~l~~~  359 (363)
                      |++|+|.++|.+.
T Consensus       105 ~~gg~L~~~l~~~  117 (350)
T d1koaa2         105 MSGGELFEKVADE  117 (350)
T ss_dssp             CCSCBHHHHHTCT
T ss_pred             CCCCCHHHHHHhh
Confidence            9999999999654

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.66  E-value=2.1e-17  Score=147.26  Aligned_cols=96  Identities=34%  Similarity=0.467  Sum_probs=83.3

Q ss_pred             HHHHhccCCCcCceecccCceEEEEEEcC-CCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeE
Q 017984          263 TLEKATNYFHESNKLGQGGSGSVYKGTLP-GGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESL  341 (363)
Q Consensus       263 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  341 (363)
                      +++...++|...+.||+|+||.||+|.+. +++.||||+++... ...++|.+|+.+|++++|||||++++++.+++..+
T Consensus        11 ~wei~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~   89 (287)
T d1opja_          11 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY   89 (287)
T ss_dssp             TTBCCGGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTC-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred             ccEecHHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCcc-chHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeE
Confidence            33444567888899999999999999974 58899999997543 34567999999999999999999999999999999


Q ss_pred             EEEEccCCCChhHHhhcC
Q 017984          342 LVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       342 lv~Ey~~~gsL~~~l~~~  359 (363)
                      |||||+++|+|.++|.+.
T Consensus        90 iv~E~~~~g~l~~~l~~~  107 (287)
T d1opja_          90 IITEFMTYGNLLDYLREC  107 (287)
T ss_dssp             EEEECCTTCBHHHHHHHS
T ss_pred             EEeecccCcchHHHhhhc
Confidence            999999999999999754

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=5e-17  Score=147.19  Aligned_cols=93  Identities=22%  Similarity=0.307  Sum_probs=83.1

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYE  345 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  345 (363)
                      .++|...+.||+|+||.||++.. .+|+.||+|+++.. .....+.+.+|+.+|++++|||||++++++.++++++||||
T Consensus         5 ~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVmE   84 (322)
T d1s9ja_           5 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   84 (322)
T ss_dssp             GGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             ccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEE
Confidence            56788999999999999999996 56899999999754 34446779999999999999999999999999999999999


Q ss_pred             ccCCCChhHHhhcCC
Q 017984          346 FVPNQSLLDNLFDKM  360 (363)
Q Consensus       346 y~~~gsL~~~l~~~~  360 (363)
                      |+++|+|.++|.++.
T Consensus        85 y~~gg~L~~~l~~~~   99 (322)
T d1s9ja_          85 HMDGGSLDQVLKKAG   99 (322)
T ss_dssp             CCTTEEHHHHHHHHS
T ss_pred             cCCCCcHHHHHhhcC
Confidence            999999999997543

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=4.8e-17  Score=143.79  Aligned_cols=91  Identities=30%  Similarity=0.424  Sum_probs=78.6

Q ss_pred             HhccCCCcCceecccCceEEEEEEcCCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEE
Q 017984          266 KATNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYE  345 (363)
Q Consensus       266 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  345 (363)
                      ...++|...+.||+|+||.||+|.+++++.||||+++... ...++|.+|+.+|.+++|||||+++|++.+ +..+||||
T Consensus        10 i~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~-~~~~iv~E   87 (272)
T d1qpca_          10 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITE   87 (272)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred             cCHHHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccCc-CCHHHHHHHHHHHHhCCCCCEeEEEeeecc-CCeEEEEE
Confidence            3456788889999999999999999888899999997543 335679999999999999999999998754 56799999


Q ss_pred             ccCCCChhHHhhc
Q 017984          346 FVPNQSLLDNLFD  358 (363)
Q Consensus       346 y~~~gsL~~~l~~  358 (363)
                      |+++|+|.+++..
T Consensus        88 y~~~g~L~~~~~~  100 (272)
T d1qpca_          88 YMENGSLVDFLKT  100 (272)
T ss_dssp             CCTTCBHHHHTTS
T ss_pred             eCCCCcHHHHHhh
Confidence            9999999998764

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=9.5e-17  Score=141.00  Aligned_cols=92  Identities=24%  Similarity=0.342  Sum_probs=80.8

Q ss_pred             cCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVY  344 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  344 (363)
                      ++|...+.||+|+||.||++.. .+++.||+|++...   .....+.+.+|+.++++++|||||++++++.+++..+|||
T Consensus         6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivm   85 (263)
T d2j4za1           6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLIL   85 (263)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEE
Confidence            4688889999999999999997 46899999999642   2234567999999999999999999999999999999999


Q ss_pred             EccCCCChhHHhhcCC
Q 017984          345 EFVPNQSLLDNLFDKM  360 (363)
Q Consensus       345 Ey~~~gsL~~~l~~~~  360 (363)
                      ||+++|+|.++|....
T Consensus        86 Ey~~~g~L~~~l~~~~  101 (263)
T d2j4za1          86 EYAPLGTVYRELQKLS  101 (263)
T ss_dssp             ECCTTCBHHHHHHHHS
T ss_pred             eecCCCcHHHHHhhcC
Confidence            9999999999997543

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.65  E-value=2.4e-16  Score=144.25  Aligned_cols=93  Identities=20%  Similarity=0.282  Sum_probs=83.7

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEc
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      .++|...+.||+|+||.||++.. .+|+.||||+++.........+.+|+.+|++++|||||++++++.+++.+||||||
T Consensus        28 ~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~  107 (352)
T d1koba_          28 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF  107 (352)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence            35688999999999999999996 56999999999876666667899999999999999999999999999999999999


Q ss_pred             cCCCChhHHhhcCC
Q 017984          347 VPNQSLLDNLFDKM  360 (363)
Q Consensus       347 ~~~gsL~~~l~~~~  360 (363)
                      +++|+|.+++....
T Consensus       108 ~~gg~L~~~~~~~~  121 (352)
T d1koba_         108 LSGGELFDRIAAED  121 (352)
T ss_dssp             CCCCBHHHHTTCTT
T ss_pred             CCCChHHHHHHhcC
Confidence            99999999886543

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.65  E-value=9e-17  Score=143.92  Aligned_cols=92  Identities=26%  Similarity=0.373  Sum_probs=78.1

Q ss_pred             cCCCcCceecccCceEEEEEEcC-CC---CEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTLP-GG---EAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLV  343 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~~-~g---~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  343 (363)
                      ++|...++||+|+||.||+|.+. ++   ..||||.+... .....++|.+|+.+|++++|||||+++|++..++..+||
T Consensus        26 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~iv  105 (299)
T d1jpaa_          26 SCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMII  105 (299)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred             hhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEE
Confidence            34566789999999999999964 23   26899998754 455567899999999999999999999999999999999


Q ss_pred             EEccCCCChhHHhhcCC
Q 017984          344 YEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       344 ~Ey~~~gsL~~~l~~~~  360 (363)
                      ||||++|+|.+++..+.
T Consensus       106 ~Ey~~~g~L~~~~~~~~  122 (299)
T d1jpaa_         106 TEFMENGSLDSFLRQND  122 (299)
T ss_dssp             EECCTTEEHHHHHHTTT
T ss_pred             EEecCCCcceeeecccc
Confidence            99999999999887643

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.64  E-value=1.2e-16  Score=143.66  Aligned_cols=93  Identities=22%  Similarity=0.275  Sum_probs=77.4

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCC-hhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNT-TQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYE  345 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  345 (363)
                      .+.|...+.||+|+||.||++.. .+|+.||||++.... ......+.+|+.+|++++|||||++++++.+++.+|||||
T Consensus         8 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE   87 (307)
T d1a06a_           8 RDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQ   87 (307)
T ss_dssp             GGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             ccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence            46688899999999999999996 468999999997542 2334568899999999999999999999999999999999


Q ss_pred             ccCCCChhHHhhcCC
Q 017984          346 FVPNQSLLDNLFDKM  360 (363)
Q Consensus       346 y~~~gsL~~~l~~~~  360 (363)
                      |+++|+|.++|.++.
T Consensus        88 ~~~gg~L~~~l~~~~  102 (307)
T d1a06a_          88 LVSGGELFDRIVEKG  102 (307)
T ss_dssp             CCCSCBHHHHHHTCS
T ss_pred             ccCCCcHHHhhhccc
Confidence            999999999997654

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=1.3e-16  Score=140.53  Aligned_cols=90  Identities=22%  Similarity=0.311  Sum_probs=77.5

Q ss_pred             cCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEe--CCeeEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSIT--GPESLLV  343 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv  343 (363)
                      ++|...+.||+|+||.||++.. .+|+.||||++...  +....+.|.+|+++|++++|||||++++++.+  .+.+|||
T Consensus         4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~iv   83 (269)
T d2java1           4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV   83 (269)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEE
T ss_pred             hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEE
Confidence            5688899999999999999986 56899999999754  34456779999999999999999999998864  4568999


Q ss_pred             EEccCCCChhHHhhc
Q 017984          344 YEFVPNQSLLDNLFD  358 (363)
Q Consensus       344 ~Ey~~~gsL~~~l~~  358 (363)
                      |||+++|+|.++|.+
T Consensus        84 mEy~~~g~L~~~i~~   98 (269)
T d2java1          84 MEYCEGGDLASVITK   98 (269)
T ss_dssp             EECCTTEEHHHHHHH
T ss_pred             EecCCCCcHHHHHHh
Confidence            999999999999864

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=3.5e-16  Score=141.43  Aligned_cols=92  Identities=15%  Similarity=0.218  Sum_probs=81.9

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEc
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      .++|...+.||+|+||.||++.. .+|+.||||+++.... ....+.+|+.+|..++|||||++++++.+++.+||||||
T Consensus         4 ~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~-~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~   82 (321)
T d1tkia_           4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGT-DQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF   82 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTH-HHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCcc-cHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEec
Confidence            46788999999999999999996 4688999999976543 345689999999999999999999999999999999999


Q ss_pred             cCCCChhHHhhcCC
Q 017984          347 VPNQSLLDNLFDKM  360 (363)
Q Consensus       347 ~~~gsL~~~l~~~~  360 (363)
                      +++|+|.++|.++.
T Consensus        83 ~~gg~L~~~i~~~~   96 (321)
T d1tkia_          83 ISGLDIFERINTSA   96 (321)
T ss_dssp             CCCCBHHHHHTSSS
T ss_pred             CCCCcHHHHHHhcC
Confidence            99999999997654

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=2.9e-16  Score=139.54  Aligned_cols=90  Identities=23%  Similarity=0.322  Sum_probs=75.4

Q ss_pred             cCCCcCce-ecccCceEEEEEEcC---CCCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEE
Q 017984          269 NYFHESNK-LGQGGSGSVYKGTLP---GGEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLV  343 (363)
Q Consensus       269 ~~~~~~~~-lg~G~~g~Vy~~~~~---~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  343 (363)
                      +++...+. ||+|+||.||+|.++   ++..||||+++.. .....++|.+|+++|.+++|||||+++|++.. +.++||
T Consensus         8 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~~lv   86 (285)
T d1u59a_           8 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLV   86 (285)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEE
T ss_pred             cCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CeEEEE
Confidence            45556664 999999999999863   3557999999754 44556789999999999999999999999865 568999


Q ss_pred             EEccCCCChhHHhhcC
Q 017984          344 YEFVPNQSLLDNLFDK  359 (363)
Q Consensus       344 ~Ey~~~gsL~~~l~~~  359 (363)
                      |||+++|+|.+++...
T Consensus        87 mE~~~~g~L~~~l~~~  102 (285)
T d1u59a_          87 MEMAGGGPLHKFLVGK  102 (285)
T ss_dssp             EECCTTEEHHHHHTTC
T ss_pred             EEeCCCCcHHHHhhcc
Confidence            9999999999998654

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=1.3e-16  Score=141.94  Aligned_cols=92  Identities=20%  Similarity=0.154  Sum_probs=80.7

Q ss_pred             cCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVY  344 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  344 (363)
                      ++|...+.||+|+||.||++.. .+|+.||||++...   .....+.+.+|+++|++++|||||++++++.+++.+||||
T Consensus         8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivm   87 (288)
T d1uu3a_           8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL   87 (288)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEE
T ss_pred             CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEE
Confidence            4688999999999999999996 56899999999642   2233567999999999999999999999999999999999


Q ss_pred             EccCCCChhHHhhcCC
Q 017984          345 EFVPNQSLLDNLFDKM  360 (363)
Q Consensus       345 Ey~~~gsL~~~l~~~~  360 (363)
                      ||+++|+|.+++....
T Consensus        88 Ey~~gg~L~~~~~~~~  103 (288)
T d1uu3a_          88 SYAKNGELLKYIRKIG  103 (288)
T ss_dssp             CCCTTEEHHHHHHHHS
T ss_pred             EccCCCCHHHhhhccC
Confidence            9999999999887543

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=4.2e-16  Score=137.38  Aligned_cols=89  Identities=24%  Similarity=0.250  Sum_probs=76.0

Q ss_pred             CcCceecccCceEEEEEEc-CCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEe----CCeeEEEE
Q 017984          272 HESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSIT----GPESLLVY  344 (363)
Q Consensus       272 ~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lv~  344 (363)
                      ...+.||+|+||.||++.. .+++.||+|.+...  .....+.|.+|+++|++++|||||++++++..    +..++|||
T Consensus        12 ~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivm   91 (270)
T d1t4ha_          12 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT   91 (270)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEEE
Confidence            4566899999999999996 46889999999643  44556789999999999999999999999875    34689999


Q ss_pred             EccCCCChhHHhhcCC
Q 017984          345 EFVPNQSLLDNLFDKM  360 (363)
Q Consensus       345 Ey~~~gsL~~~l~~~~  360 (363)
                      ||+++|+|.++|.++.
T Consensus        92 E~~~~g~L~~~l~~~~  107 (270)
T d1t4ha_          92 ELMTSGTLKTYLKRFK  107 (270)
T ss_dssp             ECCCSCBHHHHHHHHS
T ss_pred             eCCCCCcHHHHHhccc
Confidence            9999999999997643

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=1.7e-16  Score=140.46  Aligned_cols=90  Identities=30%  Similarity=0.447  Sum_probs=77.7

Q ss_pred             hccCCCcCceecccCceEEEEEEcCCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEE
Q 017984          267 ATNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVY  344 (363)
Q Consensus       267 ~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  344 (363)
                      ..++|...+.||+|+||.||+|+++  ..||||+++..  +....+.|.+|+.+|.+++|||||++++++.. +.++|||
T Consensus         6 ~~~~~~~~~~lG~G~fg~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~-~~~~lv~   82 (276)
T d1uwha_           6 PDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA-PQLAIVT   82 (276)
T ss_dssp             CTTCCCCCSEEEECSSCEEEEEESS--SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEE
T ss_pred             ccccEEEEEEEeeCCCcEEEEEEEC--CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEec-cEEEEEE
Confidence            4567889999999999999999875  35999999743  45567789999999999999999999998754 5689999


Q ss_pred             EccCCCChhHHhhcC
Q 017984          345 EFVPNQSLLDNLFDK  359 (363)
Q Consensus       345 Ey~~~gsL~~~l~~~  359 (363)
                      ||+++|+|.++|...
T Consensus        83 Ey~~~g~L~~~l~~~   97 (276)
T d1uwha_          83 QWCEGSSLYHHLHII   97 (276)
T ss_dssp             ECCCEEEHHHHHHTS
T ss_pred             ecCCCCCHHHHHhhc
Confidence            999999999999754

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.62  E-value=5e-16  Score=137.35  Aligned_cols=92  Identities=23%  Similarity=0.344  Sum_probs=80.1

Q ss_pred             cCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCCh---------hhHHHHHHHHHHHhcCC-CCCccceeeEEEeC
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTT---------QWVDHFFNEVNLISGIN-HKNLVKLLGCSITG  337 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---------~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~  337 (363)
                      ++|...+.||+|+||.||++.. .+|+.||||+++....         ...+.+.+|+.+|++++ |||||++++++.++
T Consensus         3 ~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~   82 (277)
T d1phka_           3 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETN   82 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECS
T ss_pred             ccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccC
Confidence            5788899999999999999996 5789999999975321         12346899999999997 99999999999999


Q ss_pred             CeeEEEEEccCCCChhHHhhcCC
Q 017984          338 PESLLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       338 ~~~~lv~Ey~~~gsL~~~l~~~~  360 (363)
                      +..||||||+++|||.++|..+.
T Consensus        83 ~~~~ivmE~~~~g~L~~~l~~~~  105 (277)
T d1phka_          83 TFFFLVFDLMKKGELFDYLTEKV  105 (277)
T ss_dssp             SEEEEEEECCTTCBHHHHHHHHS
T ss_pred             cceEEEEEcCCCchHHHHHHhcC
Confidence            99999999999999999997543

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.61  E-value=5.8e-16  Score=137.01  Aligned_cols=85  Identities=26%  Similarity=0.347  Sum_probs=71.0

Q ss_pred             ceecccCceEEEEEEcC---CCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEccCC
Q 017984          275 NKLGQGGSGSVYKGTLP---GGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFVPN  349 (363)
Q Consensus       275 ~~lg~G~~g~Vy~~~~~---~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~~~  349 (363)
                      +.||+|+||.||+|.++   .++.||||+++..  +....++|.+|+.+|++++|||||++++++.. +..+|||||+++
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~-~~~~lvmE~~~~   91 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL   91 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEecc-CCEEEEEEcCCC
Confidence            46999999999999863   2568999999643  33446789999999999999999999999865 467899999999


Q ss_pred             CChhHHhhcCC
Q 017984          350 QSLLDNLFDKM  360 (363)
Q Consensus       350 gsL~~~l~~~~  360 (363)
                      |+|.+++.++.
T Consensus        92 g~L~~~l~~~~  102 (277)
T d1xbba_          92 GPLNKYLQQNR  102 (277)
T ss_dssp             EEHHHHHHHCT
T ss_pred             CcHHHHHhhcc
Confidence            99999998654

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.61  E-value=3.8e-16  Score=140.35  Aligned_cols=91  Identities=23%  Similarity=0.395  Sum_probs=79.0

Q ss_pred             cCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCC---hhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNT---TQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVY  344 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  344 (363)
                      ..|...+.||+|+||.||++.. .+|+.||||++....   ....+.|.+|+.+|++++|||||++++++.+++..+|||
T Consensus        15 ~~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~   94 (309)
T d1u5ra_          15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM   94 (309)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             HhcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEE
Confidence            3478889999999999999985 568899999997542   334567999999999999999999999999999999999


Q ss_pred             EccCCCChhHHhhcC
Q 017984          345 EFVPNQSLLDNLFDK  359 (363)
Q Consensus       345 Ey~~~gsL~~~l~~~  359 (363)
                      ||+++|+|..++..+
T Consensus        95 E~~~~g~l~~~~~~~  109 (309)
T d1u5ra_          95 EYCLGSASDLLEVHK  109 (309)
T ss_dssp             ECCSEEHHHHHHHHT
T ss_pred             EecCCCchHHHHHhC
Confidence            999999998776544

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.60  E-value=4.7e-16  Score=139.38  Aligned_cols=98  Identities=28%  Similarity=0.392  Sum_probs=85.5

Q ss_pred             HHHHHhccCCCcCceecccCceEEEEEEcC------CCCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEE
Q 017984          262 ETLEKATNYFHESNKLGQGGSGSVYKGTLP------GGEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCS  334 (363)
Q Consensus       262 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~  334 (363)
                      .+++.++++|...+.||+|+||.||+|++.      +++.||||++... ..+..++|.+|+.+|++++||||+++++++
T Consensus         6 ~~~e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~   85 (301)
T d1lufa_           6 LSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVC   85 (301)
T ss_dssp             HHTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             hhccCCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeee
Confidence            345557788999999999999999999853      3578999999754 444567899999999999999999999999


Q ss_pred             EeCCeeEEEEEccCCCChhHHhhcC
Q 017984          335 ITGPESLLVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       335 ~~~~~~~lv~Ey~~~gsL~~~l~~~  359 (363)
                      ...+..++||||+++|+|.++|+..
T Consensus        86 ~~~~~~~~v~e~~~~g~L~~~l~~~  110 (301)
T d1lufa_          86 AVGKPMCLLFEYMAYGDLNEFLRSM  110 (301)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHHT
T ss_pred             ccCCceEEEEEecCCCcHHHHHHhc
Confidence            9999999999999999999999754

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=6.4e-16  Score=140.40  Aligned_cols=93  Identities=24%  Similarity=0.190  Sum_probs=82.2

Q ss_pred             cCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVY  344 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  344 (363)
                      ++|...+.||+|+||.||++.. .+|+.||||+++..   .....+.+.+|+.+|++++|||||++++++.+.+.+||||
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv~   84 (337)
T d1o6la_           5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM   84 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccce
Confidence            5688899999999999999996 57999999999743   2234567899999999999999999999999999999999


Q ss_pred             EccCCCChhHHhhcCCC
Q 017984          345 EFVPNQSLLDNLFDKML  361 (363)
Q Consensus       345 Ey~~~gsL~~~l~~~~~  361 (363)
                      ||+++|+|.+++..+..
T Consensus        85 ey~~gg~L~~~~~~~~~  101 (337)
T d1o6la_          85 EYANGGELFFHLSRERV  101 (337)
T ss_dssp             ECCTTCBHHHHHHHHSC
T ss_pred             eccCCCchhhhhhcccC
Confidence            99999999999986543

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=2.4e-16  Score=140.00  Aligned_cols=89  Identities=31%  Similarity=0.418  Sum_probs=78.2

Q ss_pred             ccCCCcCceecccCceEEEEEEcCCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEcc
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFV  347 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~  347 (363)
                      .++|...+.||+|+||.||+|.+++++.||||+++... ...+.|.+|+.+|++++|||||++++++. .++.+|||||+
T Consensus        16 ~~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~g~~~-~~~~~lv~Ey~   93 (285)
T d1fmka3          16 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYM   93 (285)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEECCC
T ss_pred             HHHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECccc-CCHHHHHHHHHHHHhcccCCEeEEEEEEe-cCCeEEEEEec
Confidence            46788999999999999999999888899999997543 34567999999999999999999999985 45689999999


Q ss_pred             CCCChhHHhhc
Q 017984          348 PNQSLLDNLFD  358 (363)
Q Consensus       348 ~~gsL~~~l~~  358 (363)
                      ++|+|..++..
T Consensus        94 ~~g~l~~~~~~  104 (285)
T d1fmka3          94 SKGSLLDFLKG  104 (285)
T ss_dssp             TTCBHHHHHSH
T ss_pred             CCCchhhhhhh
Confidence            99999998864

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=5.4e-16  Score=136.06  Aligned_cols=89  Identities=28%  Similarity=0.446  Sum_probs=74.9

Q ss_pred             ccCCCcCceecccCceEEEEEEcCCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEe-CCeeEEEEEc
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSIT-GPESLLVYEF  346 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~~lv~Ey  346 (363)
                      .++|...+.||+|+||.||+|.++ |+.||||+++...  ..++|.+|++++++++|||||+++|++.+ .+.++|||||
T Consensus         6 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~vAvK~i~~~~--~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey   82 (262)
T d1byga_           6 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY   82 (262)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred             HHHeEEeEEEecCCCeEEEEEEEC-CeEEEEEEECcHH--HHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEec
Confidence            345677889999999999999985 7899999996542  34679999999999999999999998865 4568999999


Q ss_pred             cCCCChhHHhhcC
Q 017984          347 VPNQSLLDNLFDK  359 (363)
Q Consensus       347 ~~~gsL~~~l~~~  359 (363)
                      +++|+|.++|.++
T Consensus        83 ~~~g~L~~~l~~~   95 (262)
T d1byga_          83 MAKGSLVDYLRSR   95 (262)
T ss_dssp             CTTEEHHHHHHHH
T ss_pred             cCCCCHHHHHHhc
Confidence            9999999999753

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.58  E-value=1e-15  Score=138.02  Aligned_cols=93  Identities=19%  Similarity=0.248  Sum_probs=81.6

Q ss_pred             cCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVY  344 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  344 (363)
                      ++|...+.||+|+||.||++.. .+|+.||||+++..   .....+.+.+|+.+|+.++|||||++++++.+++.+|+||
T Consensus         4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm   83 (316)
T d1fota_           4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM   83 (316)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEe
Confidence            5688899999999999999996 56999999999642   2234567999999999999999999999999999999999


Q ss_pred             EccCCCChhHHhhcCCC
Q 017984          345 EFVPNQSLLDNLFDKML  361 (363)
Q Consensus       345 Ey~~~gsL~~~l~~~~~  361 (363)
                      ||++||+|..++.....
T Consensus        84 E~~~gg~l~~~~~~~~~  100 (316)
T d1fota_          84 DYIEGGELFSLLRKSQR  100 (316)
T ss_dssp             CCCCSCBHHHHHHHTSS
T ss_pred             eecCCcccccccccccc
Confidence            99999999998876543

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=9.6e-16  Score=137.82  Aligned_cols=91  Identities=26%  Similarity=0.404  Sum_probs=76.1

Q ss_pred             cCCCcCceecccCceEEEEEEcC-CCC--EEEEEEeccC-ChhhHHHHHHHHHHHhcC-CCCCccceeeEEEeCCeeEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTLP-GGE--AVAVKRLFYN-TTQWVDHFFNEVNLISGI-NHKNLVKLLGCSITGPESLLV  343 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~--~vavK~l~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv  343 (363)
                      ++|...+.||+|+||.||+|.+. +|.  .||||+++.. .....++|.+|+++|.++ +|||||++++++.+++.++||
T Consensus        10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV   89 (309)
T d1fvra_          10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA   89 (309)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEEE
Confidence            56778899999999999999974 344  5788888643 344566799999999999 799999999999999999999


Q ss_pred             EEccCCCChhHHhhcC
Q 017984          344 YEFVPNQSLLDNLFDK  359 (363)
Q Consensus       344 ~Ey~~~gsL~~~l~~~  359 (363)
                      |||+++|+|.++|+.+
T Consensus        90 ~ey~~~g~L~~~l~~~  105 (309)
T d1fvra_          90 IEYAPHGNLLDFLRKS  105 (309)
T ss_dssp             ECCCTTCBHHHHHHTT
T ss_pred             EEecCCCcHHHHHhhc
Confidence            9999999999999765

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.57  E-value=2.1e-15  Score=133.38  Aligned_cols=93  Identities=22%  Similarity=0.234  Sum_probs=79.9

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCC----e
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGP----E  339 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~  339 (363)
                      .++|...+.||+|+||.||++.. .+|+.||||+++..   +....+.|.+|+.+++.++|||||++++++...+    .
T Consensus         6 ~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~   85 (277)
T d1o6ya_           6 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL   85 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEE
T ss_pred             cceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCce
Confidence            46688999999999999999995 57999999999753   3445667999999999999999999999987654    4


Q ss_pred             eEEEEEccCCCChhHHhhcCC
Q 017984          340 SLLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       340 ~~lv~Ey~~~gsL~~~l~~~~  360 (363)
                      .||||||+++|+|.+++....
T Consensus        86 ~~lvmE~~~g~~L~~~~~~~~  106 (277)
T d1o6ya_          86 PYIVMEYVDGVTLRDIVHTEG  106 (277)
T ss_dssp             EEEEEECCCEEEHHHHHHHHC
T ss_pred             EEEEEECCCCCEehhhhcccC
Confidence            899999999999999887543

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=1.8e-15  Score=136.59  Aligned_cols=92  Identities=20%  Similarity=0.243  Sum_probs=78.4

Q ss_pred             cCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC---ChhhHHHHHHHHHHHh-cCCCCCccceeeEEEeCCeeEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN---TTQWVDHFFNEVNLIS-GINHKNLVKLLGCSITGPESLLV  343 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~-~l~h~niv~l~~~~~~~~~~~lv  343 (363)
                      ++|...+.||+|+||.||++.. .+|+.||||+++..   .....+.+.+|..++. .++|||||++++++.+++.+|||
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yiv   81 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV   81 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred             CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEE
Confidence            5788899999999999999996 46899999999642   2233456778877765 68999999999999999999999


Q ss_pred             EEccCCCChhHHhhcCC
Q 017984          344 YEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       344 ~Ey~~~gsL~~~l~~~~  360 (363)
                      |||+++|+|.++|..+.
T Consensus        82 mEy~~~g~L~~~i~~~~   98 (320)
T d1xjda_          82 MEYLNGGDLMYHIQSCH   98 (320)
T ss_dssp             EECCTTCBHHHHHHHHS
T ss_pred             EeecCCCcHHHHhhccC
Confidence            99999999999997644

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=2.9e-15  Score=132.94  Aligned_cols=91  Identities=26%  Similarity=0.402  Sum_probs=78.4

Q ss_pred             cCCCcCceecccCceEEEEEEcCC-C----CEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTLPG-G----EAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLL  342 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~~~-g----~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  342 (363)
                      +.|...++||+|+||.||+|.+++ +    ..||||++... ......+|.+|+.+|.+++|||||+++|++.+.+..++
T Consensus         7 ~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~   86 (283)
T d1mqba_           7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI   86 (283)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEE
Confidence            457788999999999999998643 2    37999999754 44456679999999999999999999999999999999


Q ss_pred             EEEccCCCChhHHhhcC
Q 017984          343 VYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       343 v~Ey~~~gsL~~~l~~~  359 (363)
                      ||||+++|+|.+++.+.
T Consensus        87 v~e~~~~~~l~~~~~~~  103 (283)
T d1mqba_          87 ITEYMENGALDKFLREK  103 (283)
T ss_dssp             EEECCTTEEHHHHHHHT
T ss_pred             EEEecccCcchhhhhcc
Confidence            99999999999987654

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=9.2e-16  Score=137.86  Aligned_cols=96  Identities=28%  Similarity=0.394  Sum_probs=82.1

Q ss_pred             HHHHhccCCCcCceecccCceEEEEEEcC------CCCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEE
Q 017984          263 TLEKATNYFHESNKLGQGGSGSVYKGTLP------GGEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSI  335 (363)
Q Consensus       263 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~  335 (363)
                      +++...++|...+.||+|+||.||+|.+.      +++.||||+++.. ..+....|.+|+.++.+++|||||++++++.
T Consensus        14 ~~ei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~   93 (308)
T d1p4oa_          14 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS   93 (308)
T ss_dssp             TTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEEC
T ss_pred             ceeecHHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEe
Confidence            34444577888999999999999999863      2578999999754 4455567999999999999999999999999


Q ss_pred             eCCeeEEEEEccCCCChhHHhhc
Q 017984          336 TGPESLLVYEFVPNQSLLDNLFD  358 (363)
Q Consensus       336 ~~~~~~lv~Ey~~~gsL~~~l~~  358 (363)
                      .++..+|||||+++|+|.+++..
T Consensus        94 ~~~~~~lv~e~~~~g~l~~~~~~  116 (308)
T d1p4oa_          94 QGQPTLVIMELMTRGDLKSYLRS  116 (308)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHH
T ss_pred             cCCceeEEEeecCCCCHHHHHHh
Confidence            99999999999999999999864

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=1.4e-15  Score=136.78  Aligned_cols=96  Identities=30%  Similarity=0.368  Sum_probs=82.6

Q ss_pred             HHhccCCCcCceecccCceEEEEEEc------CCCCEEEEEEeccC-ChhhHHHHHHHHHHHhcC-CCCCccceeeEEEe
Q 017984          265 EKATNYFHESNKLGQGGSGSVYKGTL------PGGEAVAVKRLFYN-TTQWVDHFFNEVNLISGI-NHKNLVKLLGCSIT  336 (363)
Q Consensus       265 ~~~~~~~~~~~~lg~G~~g~Vy~~~~------~~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~  336 (363)
                      +...++|...+.||+|+||.||+|.+      .+++.||||+++.. ......+|.+|+.++.++ +|||||++++++.+
T Consensus        19 ~~~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~   98 (311)
T d1t46a_          19 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTI   98 (311)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             cCCHHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEee
Confidence            34557788899999999999999984      34678999999754 445566799999999999 69999999999999


Q ss_pred             CCeeEEEEEccCCCChhHHhhcCC
Q 017984          337 GPESLLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       337 ~~~~~lv~Ey~~~gsL~~~l~~~~  360 (363)
                      ++..+|||||+++|+|.++|+...
T Consensus        99 ~~~~~lvmE~~~~g~l~~~l~~~~  122 (311)
T d1t46a_          99 GGPTLVITEYCCYGDLLNFLRRKR  122 (311)
T ss_dssp             SSSCEEEEECCTTEEHHHHHHHTT
T ss_pred             CCEEEEEEEcCCCCCHHHHHHhcc
Confidence            999999999999999999997643

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=2.6e-15  Score=135.88  Aligned_cols=95  Identities=26%  Similarity=0.370  Sum_probs=78.5

Q ss_pred             HhccCCCcCceecccCceEEEEEEcCC-C-----CEEEEEEeccC-ChhhHHHHHHHHHHHhcC-CCCCccceeeEEEeC
Q 017984          266 KATNYFHESNKLGQGGSGSVYKGTLPG-G-----EAVAVKRLFYN-TTQWVDHFFNEVNLISGI-NHKNLVKLLGCSITG  337 (363)
Q Consensus       266 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~-g-----~~vavK~l~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~  337 (363)
                      ...++|...+.||+|+||.||+|.... +     ..||+|.+... .......|.+|+.+|.++ +|||||++++++.+.
T Consensus        34 i~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~  113 (325)
T d1rjba_          34 FPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLS  113 (325)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             CCHHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeC
Confidence            345678899999999999999998632 2     36999998653 334456799999999998 899999999999999


Q ss_pred             CeeEEEEEccCCCChhHHhhcCC
Q 017984          338 PESLLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       338 ~~~~lv~Ey~~~gsL~~~l~~~~  360 (363)
                      +.++|||||+++|+|.++|+.++
T Consensus       114 ~~~~lv~Ey~~~g~L~~~l~~~~  136 (325)
T d1rjba_         114 GPIYLIFEYCCYGDLLNYLRSKR  136 (325)
T ss_dssp             SSCEEEEECCTTCBHHHHHHTTT
T ss_pred             CeEEEEEEcCCCCcHHHHHHhcc
Confidence            99999999999999999997653

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=1.3e-14  Score=130.36  Aligned_cols=87  Identities=28%  Similarity=0.438  Sum_probs=74.3

Q ss_pred             CceecccCceEEEEEEcCC--C--CEEEEEEecc-CChhhHHHHHHHHHHHhcCCCCCccceeeEEEe-CCeeEEEEEcc
Q 017984          274 SNKLGQGGSGSVYKGTLPG--G--EAVAVKRLFY-NTTQWVDHFFNEVNLISGINHKNLVKLLGCSIT-GPESLLVYEFV  347 (363)
Q Consensus       274 ~~~lg~G~~g~Vy~~~~~~--g--~~vavK~l~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~~lv~Ey~  347 (363)
                      .++||+|+||.||+|.+.+  +  ..||||+++. .+....++|.+|+++|.+++|||||+++|++.. +...++||||+
T Consensus        32 ~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~  111 (311)
T d1r0pa_          32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM  111 (311)
T ss_dssp             EEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEECC
T ss_pred             ceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEEe
Confidence            5689999999999999743  2  3689999975 355667889999999999999999999999876 46899999999


Q ss_pred             CCCChhHHhhcCC
Q 017984          348 PNQSLLDNLFDKM  360 (363)
Q Consensus       348 ~~gsL~~~l~~~~  360 (363)
                      ++|+|.+++....
T Consensus       112 ~~g~l~~~~~~~~  124 (311)
T d1r0pa_         112 KHGDLRNFIRNET  124 (311)
T ss_dssp             TTCBHHHHHHCTT
T ss_pred             ecCchhhhhcccc
Confidence            9999999988654

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=2.6e-15  Score=132.55  Aligned_cols=93  Identities=20%  Similarity=0.255  Sum_probs=78.1

Q ss_pred             hccCCCcCceecccCceEEEEEEcCC----CCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeE
Q 017984          267 ATNYFHESNKLGQGGSGSVYKGTLPG----GEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESL  341 (363)
Q Consensus       267 ~~~~~~~~~~lg~G~~g~Vy~~~~~~----g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  341 (363)
                      ..++|...+.||+|+||.||+|.+..    +..||||.++.. .....+.|.+|+.+|++++|||||++++++. .+..+
T Consensus         5 ~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~   83 (273)
T d1mp8a_           5 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVW   83 (273)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCE
T ss_pred             CHHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCeEE
Confidence            35678889999999999999998632    347899998754 4445677999999999999999999999985 46789


Q ss_pred             EEEEccCCCChhHHhhcCC
Q 017984          342 LVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       342 lv~Ey~~~gsL~~~l~~~~  360 (363)
                      |||||+++|+|.+++....
T Consensus        84 iv~E~~~~g~l~~~~~~~~  102 (273)
T d1mp8a_          84 IIMELCTLGELRSFLQVRK  102 (273)
T ss_dssp             EEEECCTTEEHHHHHHHTT
T ss_pred             EEEEeccCCcHHhhhhccC
Confidence            9999999999999876543

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.51  E-value=1.2e-14  Score=133.26  Aligned_cols=93  Identities=20%  Similarity=0.128  Sum_probs=76.6

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC---ChhhHHHH---HHHHHHHhcCCCCCccceeeEEEeCCee
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN---TTQWVDHF---FNEVNLISGINHKNLVKLLGCSITGPES  340 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~---~~E~~~l~~l~h~niv~l~~~~~~~~~~  340 (363)
                      .++|...+.||+|+||.||++.. .+|+.||||++...   .......+   .+|+.+++.++|||||++++++.+.+.+
T Consensus         3 lddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~   82 (364)
T d1omwa3           3 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL   82 (364)
T ss_dssp             STTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred             HHhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEE
Confidence            36788999999999999999996 56999999999632   11122233   4457788888999999999999999999


Q ss_pred             EEEEEccCCCChhHHhhcCC
Q 017984          341 LLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       341 ~lv~Ey~~~gsL~~~l~~~~  360 (363)
                      ||||||+++|+|.++|.++.
T Consensus        83 ~ivmE~~~gg~L~~~l~~~~  102 (364)
T d1omwa3          83 SFILDLMNGGDLHYHLSQHG  102 (364)
T ss_dssp             EEEECCCCSCBHHHHHHHHC
T ss_pred             EEEEEecCCCcHHHHHHhcc
Confidence            99999999999999997654

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.51  E-value=9.7e-15  Score=130.74  Aligned_cols=88  Identities=24%  Similarity=0.371  Sum_probs=71.0

Q ss_pred             CCCcCceecccCceEEEEEEcCCCCEEEEEEeccCChhhHHHHHH--HHHHHhcCCCCCccceeeEEEeCC----eeEEE
Q 017984          270 YFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFN--EVNLISGINHKNLVKLLGCSITGP----ESLLV  343 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~--E~~~l~~l~h~niv~l~~~~~~~~----~~~lv  343 (363)
                      .|...+.||+|+||.||+|++ +|+.||||+++...   .+++.+  |+..+.+++|||||++++++.+.+    .++||
T Consensus         4 ~~~l~~~iG~G~fg~Vy~~~~-~g~~vAvK~~~~~~---~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv   79 (303)
T d1vjya_           4 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV   79 (303)
T ss_dssp             GEEEEEEEECCSSSEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred             EEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc---hhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEE
Confidence            456778999999999999997 48899999996432   233444  445556789999999999998654    68999


Q ss_pred             EEccCCCChhHHhhcCCC
Q 017984          344 YEFVPNQSLLDNLFDKML  361 (363)
Q Consensus       344 ~Ey~~~gsL~~~l~~~~~  361 (363)
                      ||||++|+|.++|+++..
T Consensus        80 ~Ey~~~g~L~~~l~~~~l   97 (303)
T d1vjya_          80 SDYHEHGSLFDYLNRYTV   97 (303)
T ss_dssp             EECCTTCBHHHHHHHCCB
T ss_pred             EecccCCCHHHHHhcCCC
Confidence            999999999999987654

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.50  E-value=1.4e-14  Score=128.66  Aligned_cols=92  Identities=24%  Similarity=0.317  Sum_probs=80.1

Q ss_pred             cCCCcCceecccCceEEEEEEcCCCCEEEEEEeccCC--hhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEc
Q 017984          269 NYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNT--TQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      ++|...++||+|+||.||++..++|+.||||+++...  ....+.|.+|+.+|++++|||||++++++..++..++++||
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~   81 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CCceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEe
Confidence            5788899999999999999999889999999997542  23356799999999999999999999999999999999999


Q ss_pred             cCCCChhHHhhcCC
Q 017984          347 VPNQSLLDNLFDKM  360 (363)
Q Consensus       347 ~~~gsL~~~l~~~~  360 (363)
                      +.++.+..+...+.
T Consensus        82 ~~~~~~~~~~~~~~   95 (286)
T d1ob3a_          82 LDQDLKKLLDVCEG   95 (286)
T ss_dssp             CSEEHHHHHHTSTT
T ss_pred             ehhhhHHHHHhhcC
Confidence            98877777766443

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.50  E-value=1.3e-14  Score=132.49  Aligned_cols=92  Identities=24%  Similarity=0.286  Sum_probs=81.0

Q ss_pred             cCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVY  344 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  344 (363)
                      ++|...+.||+|+||.||++.. .+|+.||||++...   .....+.+.+|+.+|+.++|||||++++++......++||
T Consensus        41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~  120 (350)
T d1rdqe_          41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM  120 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeeccccccccccccccc
Confidence            5688999999999999999996 56999999999642   2234567999999999999999999999999999999999


Q ss_pred             EccCCCChhHHhhcCC
Q 017984          345 EFVPNQSLLDNLFDKM  360 (363)
Q Consensus       345 Ey~~~gsL~~~l~~~~  360 (363)
                      ||+.+|+|.++|.++.
T Consensus       121 e~~~~g~l~~~l~~~~  136 (350)
T d1rdqe_         121 EYVAGGEMFSHLRRIG  136 (350)
T ss_dssp             ECCTTCBHHHHHHHHC
T ss_pred             ccccccchhhhHhhcC
Confidence            9999999999987643

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=2.2e-14  Score=128.12  Aligned_cols=88  Identities=33%  Similarity=0.487  Sum_probs=73.5

Q ss_pred             cCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCC--hhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNT--TQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYE  345 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  345 (363)
                      ++|...+.||+|+||.||++.. .+|+.||||+++...  ....+.+.+|+.+|++++|||||++++++.+++.++||||
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e   81 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE   81 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEe
Confidence            5788999999999999999996 579999999996532  2335679999999999999999999999999999999999


Q ss_pred             ccCCCChhHHhh
Q 017984          346 FVPNQSLLDNLF  357 (363)
Q Consensus       346 y~~~gsL~~~l~  357 (363)
                      |+.++ +.+++.
T Consensus        82 ~~~~~-~~~~~~   92 (298)
T d1gz8a_          82 FLHQD-LKKFMD   92 (298)
T ss_dssp             CCSEE-HHHHHH
T ss_pred             ecCCc-hhhhhh
Confidence            99764 444443

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=2.3e-14  Score=128.04  Aligned_cols=86  Identities=21%  Similarity=0.285  Sum_probs=70.4

Q ss_pred             CceecccCceEEEEEEc-CCCCEEEEEEeccCChh-----hHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEEcc
Q 017984          274 SNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQ-----WVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYEFV  347 (363)
Q Consensus       274 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~Ey~  347 (363)
                      .++||+|+||.||++.. .+|+.||||+++.....     ..+.+.+|+.+|++++|||||++++++..++..+|||||+
T Consensus         3 l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~~   82 (299)
T d1ua2a_           3 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM   82 (299)
T ss_dssp             EEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECC
T ss_pred             ceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhhh
Confidence            46899999999999996 46899999999753221     1346899999999999999999999999999999999999


Q ss_pred             CCCChhHHhhcC
Q 017984          348 PNQSLLDNLFDK  359 (363)
Q Consensus       348 ~~gsL~~~l~~~  359 (363)
                      +++++..++..+
T Consensus        83 ~~~~~~~~~~~~   94 (299)
T d1ua2a_          83 ETDLEVIIKDNS   94 (299)
T ss_dssp             SEEHHHHHTTCC
T ss_pred             cchHHhhhhhcc
Confidence            998877666543

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=1.2e-14  Score=128.04  Aligned_cols=90  Identities=38%  Similarity=0.582  Sum_probs=68.2

Q ss_pred             cCCCcCceecccCceEEEEEEc--CCC--CEEEEEEeccC---ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL--PGG--EAVAVKRLFYN---TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESL  341 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~--~~g--~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  341 (363)
                      ++|...+.||+|+||.||+|.+  .++  ..||||++...   ..+..++|.+|+.+|++++|||||+++|++.+ +..+
T Consensus         8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~~~   86 (273)
T d1u46a_           8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPMK   86 (273)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCE
T ss_pred             HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cchh
Confidence            4577888999999999999985  223  37899998753   34456789999999999999999999999976 4678


Q ss_pred             EEEEccCCCChhHHhhcC
Q 017984          342 LVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       342 lv~Ey~~~gsL~~~l~~~  359 (363)
                      |||||+++|+|.+++..+
T Consensus        87 lv~e~~~~~~l~~~~~~~  104 (273)
T d1u46a_          87 MVTELAPLGSLLDRLRKH  104 (273)
T ss_dssp             EEEECCTTCBHHHHHHHH
T ss_pred             eeeeeecCcchhhhhhcc
Confidence            999999999999887643

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=5.4e-14  Score=126.62  Aligned_cols=91  Identities=27%  Similarity=0.474  Sum_probs=73.6

Q ss_pred             cCCCcCceecccCceEEEEEEcC-CCC----EEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTLP-GGE----AVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLL  342 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~~-~g~----~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  342 (363)
                      ++|+..++||+|+||.||+|.+. +|+    .||+|+++.. +.+..++|.+|+.++.+++|||||+++|++.++ ..++
T Consensus         9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~~~~   87 (317)
T d1xkka_           9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL   87 (317)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEEE
T ss_pred             HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-CeeE
Confidence            35888999999999999999863 444    6899998653 445567899999999999999999999999765 5678


Q ss_pred             EEEccCCCChhHHhhcCC
Q 017984          343 VYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       343 v~Ey~~~gsL~~~l~~~~  360 (363)
                      ++||+.+|+|.+++..+.
T Consensus        88 v~e~~~~~~l~~~~~~~~  105 (317)
T d1xkka_          88 ITQLMPFGCLLDYVREHK  105 (317)
T ss_dssp             EEECCTTCBHHHHHHHTS
T ss_pred             EEEeccCCcccccccccc
Confidence            899999999999887543

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=2e-14  Score=128.49  Aligned_cols=94  Identities=23%  Similarity=0.330  Sum_probs=75.0

Q ss_pred             hccCCCcCceecccCceEEEEEEcC--------CCCEEEEEEeccC-ChhhHHHHHHHHHHHhcC-CCCCccceeeEEEe
Q 017984          267 ATNYFHESNKLGQGGSGSVYKGTLP--------GGEAVAVKRLFYN-TTQWVDHFFNEVNLISGI-NHKNLVKLLGCSIT  336 (363)
Q Consensus       267 ~~~~~~~~~~lg~G~~g~Vy~~~~~--------~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~  336 (363)
                      ..++|...+.||+|+||.||++...        ++..||||+++.. ......++.+|...+.++ +|||||++++++.+
T Consensus        11 ~~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~   90 (299)
T d1fgka_          11 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ   90 (299)
T ss_dssp             CGGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             cHHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEeccccccc
Confidence            4567788899999999999999852        1347999999764 344567899999999888 79999999999999


Q ss_pred             CCeeEEEEEccCCCChhHHhhcCC
Q 017984          337 GPESLLVYEFVPNQSLLDNLFDKM  360 (363)
Q Consensus       337 ~~~~~lv~Ey~~~gsL~~~l~~~~  360 (363)
                      ++..++||||+++|+|.++|..+.
T Consensus        91 ~~~~~~v~e~~~~g~l~~~i~~~~  114 (299)
T d1fgka_          91 DGPLYVIVEYASKGNLREYLQARR  114 (299)
T ss_dssp             SSSCEEEECCCTTCBHHHHHHTTS
T ss_pred             CCeEEEEEEccCCCcHHHHHHhhc
Confidence            999999999999999999997654

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=7.5e-14  Score=124.01  Aligned_cols=93  Identities=24%  Similarity=0.283  Sum_probs=81.7

Q ss_pred             cCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCCeeEEEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGPESLLVYE  345 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~E  345 (363)
                      ++|+..+.||+|+||.||+++. .+++.||||+++..  ......++.+|+.+|+.++||||+++++++......++|+|
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~   81 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEee
Confidence            4688899999999999999996 57899999999753  33446789999999999999999999999999999999999


Q ss_pred             ccCCCChhHHhhcCCC
Q 017984          346 FVPNQSLLDNLFDKML  361 (363)
Q Consensus       346 y~~~gsL~~~l~~~~~  361 (363)
                      ++.+++|..++.....
T Consensus        82 ~~~~~~l~~~~~~~~~   97 (292)
T d1unla_          82 FCDQDLKKYFDSCNGD   97 (292)
T ss_dssp             CCSEEHHHHHHHTTTC
T ss_pred             eccccccccccccccc
Confidence            9999999888776543

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=5.1e-14  Score=127.67  Aligned_cols=87  Identities=21%  Similarity=0.193  Sum_probs=72.5

Q ss_pred             ccCCCcC-ceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcC-CCCCccceeeEEEe----CCee
Q 017984          268 TNYFHES-NKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGI-NHKNLVKLLGCSIT----GPES  340 (363)
Q Consensus       268 ~~~~~~~-~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~----~~~~  340 (363)
                      .++|... +.||+|+||.||++.. .+++.||||+++..     ..+.+|+.++.++ +|||||++++++.+    ...+
T Consensus        10 ~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~-----~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~   84 (335)
T d2ozaa1          10 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL   84 (335)
T ss_dssp             GGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred             ccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECCc-----HHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEE
Confidence            3567765 4699999999999996 67899999999643     3477899887654 89999999999875    4578


Q ss_pred             EEEEEccCCCChhHHhhcC
Q 017984          341 LLVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       341 ~lv~Ey~~~gsL~~~l~~~  359 (363)
                      |||||||+||+|.++|.++
T Consensus        85 ~ivmEy~~gg~L~~~i~~~  103 (335)
T d2ozaa1          85 LIVMECLDGGELFSRIQDR  103 (335)
T ss_dssp             EEEEECCCSEEHHHHHHSC
T ss_pred             EEEEECCCCCcHHHHHHhc
Confidence            9999999999999999764

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.40  E-value=1.1e-13  Score=123.63  Aligned_cols=100  Identities=25%  Similarity=0.278  Sum_probs=78.9

Q ss_pred             chHHHHHhccCCCcCceecccCceEEEEEEcC------CCCEEEEEEeccC-ChhhHHHHHHHHHHHhcC-CCCCcccee
Q 017984          260 SYETLEKATNYFHESNKLGQGGSGSVYKGTLP------GGEAVAVKRLFYN-TTQWVDHFFNEVNLISGI-NHKNLVKLL  331 (363)
Q Consensus       260 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~  331 (363)
                      +...++...++|...+.||+|+||.||+|.+.      +++.||||+++.. .....+.+.+|..++.++ +|+|||.++
T Consensus         4 ~~~~wei~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~   83 (299)
T d1ywna1           4 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL   83 (299)
T ss_dssp             CHHHHBCCGGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             CCccccccHHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEee
Confidence            34455555678999999999999999999852      3468999999753 444566788898888877 689999999


Q ss_pred             eEEEeC-CeeEEEEEccCCCChhHHhhcC
Q 017984          332 GCSITG-PESLLVYEFVPNQSLLDNLFDK  359 (363)
Q Consensus       332 ~~~~~~-~~~~lv~Ey~~~gsL~~~l~~~  359 (363)
                      +++... ..+++||||+++|+|.++|+.+
T Consensus        84 ~~~~~~~~~~~iv~E~~~~g~L~~~l~~~  112 (299)
T d1ywna1          84 GACTKPGGPLMVIVEFCKFGNLSTYLRSK  112 (299)
T ss_dssp             EEECSTTSCCEEEEECCTTCBHHHHHHHT
T ss_pred             eeeccCCCeEEEEEEecCCCcHHHHHHhc
Confidence            987764 4689999999999999999754

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=2.1e-13  Score=124.24  Aligned_cols=93  Identities=22%  Similarity=0.392  Sum_probs=72.2

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCC------
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGP------  338 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------  338 (363)
                      .+.|...++||+|+||.||++.. .+|+.||||+++..  .....+.+.+|+.+|+.++|||||++++++...+      
T Consensus        17 ~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~   96 (346)
T d1cm8a_          17 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT   96 (346)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred             CCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccc
Confidence            46788899999999999999996 56999999999753  3445677999999999999999999999997654      


Q ss_pred             eeEEEEEccCCCChhHHhhcCCC
Q 017984          339 ESLLVYEFVPNQSLLDNLFDKML  361 (363)
Q Consensus       339 ~~~lv~Ey~~~gsL~~~l~~~~~  361 (363)
                      +++|||||+ +.+|..++...++
T Consensus        97 ~~~lv~e~~-~~~l~~~~~~~~l  118 (346)
T d1cm8a_          97 DFYLVMPFM-GTDLGKLMKHEKL  118 (346)
T ss_dssp             CCEEEEECC-SEEHHHHHHHCCC
T ss_pred             eEEEEEecc-cccHHHHHHhccc
Confidence            579999999 5678887765544

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=1.8e-13  Score=124.67  Aligned_cols=95  Identities=20%  Similarity=0.274  Sum_probs=79.1

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeC-----Ce
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSITG-----PE  339 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~  339 (363)
                      .++|...++||+|+||.||++.. .+|+.||||+++..  +....+.+.+|+.+|+.++|||||++++++...     ..
T Consensus        17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~   96 (348)
T d2gfsa1          17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN   96 (348)
T ss_dssp             ETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCC
T ss_pred             CCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCc
Confidence            46788999999999999999995 57999999999753  344556799999999999999999999998643     34


Q ss_pred             eEEEEEccCCCChhHHhhcCCCC
Q 017984          340 SLLVYEFVPNQSLLDNLFDKMLS  362 (363)
Q Consensus       340 ~~lv~Ey~~~gsL~~~l~~~~~~  362 (363)
                      .++++||+.+|+|.+++..++++
T Consensus        97 ~~~i~~~~~gg~L~~~~~~~~l~  119 (348)
T d2gfsa1          97 DVYLVTHLMGADLNNIVKCQKLT  119 (348)
T ss_dssp             CCEEEEECCSEEHHHHHTTCCCC
T ss_pred             eEEEEEeecCCchhhhccccccc
Confidence            56777888899999999776543

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=5.5e-14  Score=126.76  Aligned_cols=93  Identities=22%  Similarity=0.240  Sum_probs=79.1

Q ss_pred             cCCCcCceecccCceEEEEEEc----CCCCEEEEEEeccC----ChhhHHHHHHHHHHHhcCCC-CCccceeeEEEeCCe
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL----PGGEAVAVKRLFYN----TTQWVDHFFNEVNLISGINH-KNLVKLLGCSITGPE  339 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~----~~g~~vavK~l~~~----~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~  339 (363)
                      ++|...+.||+|+||.||++..    .+|+.||||+++..    +....+.+.+|+++|.+++| |||+++++++.+...
T Consensus        24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~  103 (322)
T d1vzoa_          24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK  103 (322)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred             hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCc
Confidence            5688999999999999999984    24889999998642    22234568899999999966 899999999999999


Q ss_pred             eEEEEEccCCCChhHHhhcCCC
Q 017984          340 SLLVYEFVPNQSLLDNLFDKML  361 (363)
Q Consensus       340 ~~lv~Ey~~~gsL~~~l~~~~~  361 (363)
                      .+++|||+.+|+|.+++.....
T Consensus       104 ~~~v~e~~~~~~L~~~i~~~~~  125 (322)
T d1vzoa_         104 LHLILDYINGGELFTHLSQRER  125 (322)
T ss_dssp             EEEEECCCCSCBHHHHHHHHSC
T ss_pred             eeeeeecccccHHHHHHHhccc
Confidence            9999999999999999876543

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.37  E-value=3.2e-13  Score=122.93  Aligned_cols=95  Identities=15%  Similarity=0.213  Sum_probs=74.8

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC-ChhhHHHHHHHHHHHhcCCCCCccceeeEEEeCC----eeE
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN-TTQWVDHFFNEVNLISGINHKNLVKLLGCSITGP----ESL  341 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~~  341 (363)
                      +++|...++||+|+||.||+|.. .+|+.||||++... .....+.+.+|+.+|+.++||||+++++++....    ..+
T Consensus         7 ~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~   86 (345)
T d1pmea_           7 GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV   86 (345)
T ss_dssp             CTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred             CCCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceE
Confidence            45688899999999999999985 67999999999754 3455678999999999999999999999987643    234


Q ss_pred             EEEEccCCCChhHHhhcCCCC
Q 017984          342 LVYEFVPNQSLLDNLFDKMLS  362 (363)
Q Consensus       342 lv~Ey~~~gsL~~~l~~~~~~  362 (363)
                      +++||+.+|+|.+++..++++
T Consensus        87 ~l~~~~~~g~L~~~l~~~~l~  107 (345)
T d1pmea_          87 YLVTHLMGADLYKLLKTQHLS  107 (345)
T ss_dssp             EEEEECCCEEHHHHHHHCCCC
T ss_pred             EEEEeecCCchhhhhhcCCCC
Confidence            555667799999999766543

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.37  E-value=4.6e-13  Score=120.96  Aligned_cols=85  Identities=21%  Similarity=0.290  Sum_probs=73.9

Q ss_pred             cCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcCC-CCCccceeeEEEeC--CeeEEEE
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGIN-HKNLVKLLGCSITG--PESLLVY  344 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~--~~~~lv~  344 (363)
                      ++|...++||+|+||.||+++. .+|+.||||+++...   .+++.+|+.+|.+++ ||||+++++++...  ..+++||
T Consensus        35 d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~---~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~  111 (328)
T d3bqca1          35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF  111 (328)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSSC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEE
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHHH---HHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEE
Confidence            5788999999999999999996 568999999997543   456899999999995 99999999998754  5689999


Q ss_pred             EccCCCChhHHh
Q 017984          345 EFVPNQSLLDNL  356 (363)
Q Consensus       345 Ey~~~gsL~~~l  356 (363)
                      ||+++|+|..+.
T Consensus       112 e~~~~~~L~~~~  123 (328)
T d3bqca1         112 EHVNNTDFKQLY  123 (328)
T ss_dssp             ECCCSCBGGGTT
T ss_pred             eecCCCcHHHHh
Confidence            999999998764

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.35  E-value=4.8e-13  Score=122.24  Aligned_cols=88  Identities=23%  Similarity=0.323  Sum_probs=71.7

Q ss_pred             cCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEe------CCe
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSIT------GPE  339 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~~~  339 (363)
                      ++|...++||+|+||.||+|.. .+|+.||||++...  .......+.+|+.++++++|||||++++++..      ...
T Consensus        17 ~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~   96 (355)
T d2b1pa1          17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD   96 (355)
T ss_dssp             TTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred             CCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCce
Confidence            5688999999999999999996 46999999999753  34455679999999999999999999999864      368


Q ss_pred             eEEEEEccCCCChhHHhh
Q 017984          340 SLLVYEFVPNQSLLDNLF  357 (363)
Q Consensus       340 ~~lv~Ey~~~gsL~~~l~  357 (363)
                      +|+||||+.++ |.+.+.
T Consensus        97 ~~iv~Ey~~~~-l~~~~~  113 (355)
T d2b1pa1          97 VYLVMELMDAN-LCQVIQ  113 (355)
T ss_dssp             EEEEEECCSEE-HHHHHT
T ss_pred             eEEEEeccchH-HHHhhh
Confidence            89999999765 445444

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=1.5e-13  Score=120.93  Aligned_cols=91  Identities=24%  Similarity=0.299  Sum_probs=75.4

Q ss_pred             cCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCC---h---hhHHHHHHHHHHHhcCC--CCCccceeeEEEeCCe
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNT---T---QWVDHFFNEVNLISGIN--HKNLVKLLGCSITGPE  339 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~---~---~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~  339 (363)
                      ++|...+.||+|+||.||++.. .+|+.||||++....   .   ....++.+|+.+|++++  |||||++++++.+++.
T Consensus         4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~   83 (273)
T d1xwsa_           4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS   83 (273)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred             CeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCe
Confidence            5688899999999999999996 578999999996421   1   11234779999999986  8999999999999999


Q ss_pred             eEEEEEccCC-CChhHHhhcC
Q 017984          340 SLLVYEFVPN-QSLLDNLFDK  359 (363)
Q Consensus       340 ~~lv~Ey~~~-gsL~~~l~~~  359 (363)
                      .++||||+.+ ++|.+++..+
T Consensus        84 ~~lv~e~~~~~~~l~~~~~~~  104 (273)
T d1xwsa_          84 FVLILERPEPVQDLFDFITER  104 (273)
T ss_dssp             EEEEEECCSSEEEHHHHHHHH
T ss_pred             EEEEEEeccCcchHHHHHhcc
Confidence            9999999976 6777777643

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.32  E-value=8.6e-13  Score=118.62  Aligned_cols=90  Identities=22%  Similarity=0.346  Sum_probs=72.2

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccC--ChhhHHHHHHHHHHHhcCCCCCccceeeEEEe--------
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYN--TTQWVDHFFNEVNLISGINHKNLVKLLGCSIT--------  336 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--------  336 (363)
                      .++|+..+.||+|+||.||++.. .+|+.||||++...  ......++.+|+.+|++++||||+++++.+..        
T Consensus         9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~   88 (318)
T d3blha1           9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC   88 (318)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC--------
T ss_pred             cCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeeccccccccc
Confidence            46788999999999999999996 57999999998643  33345678999999999999999999998755        


Q ss_pred             CCeeEEEEEccCCCChhHHhh
Q 017984          337 GPESLLVYEFVPNQSLLDNLF  357 (363)
Q Consensus       337 ~~~~~lv~Ey~~~gsL~~~l~  357 (363)
                      ...+++||||++++.+..+..
T Consensus        89 ~~~~~iv~e~~~~~~~~~~~~  109 (318)
T d3blha1          89 KGSIYLVFDFCEHDLAGLLSN  109 (318)
T ss_dssp             --CEEEEEECCCEEHHHHHTC
T ss_pred             CceEEEEEeccCCCccchhhh
Confidence            346899999998877665544

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.28  E-value=1.4e-12  Score=118.81  Aligned_cols=80  Identities=25%  Similarity=0.431  Sum_probs=65.6

Q ss_pred             CCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccceeeEEEeC------CeeEE
Q 017984          270 YFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKLLGCSITG------PESLL  342 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~~~l  342 (363)
                      .|...++||+|+||.||++.. .+|+.||||++......    +.+|+.+|++++||||+++++++...      ..++|
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~----~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~l   96 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF----KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL   96 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSS----CCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEE
T ss_pred             CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccchH----HHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEE
Confidence            467788999999999999996 56999999999754322    35799999999999999999998643      35799


Q ss_pred             EEEccCCCChh
Q 017984          343 VYEFVPNQSLL  353 (363)
Q Consensus       343 v~Ey~~~gsL~  353 (363)
                      ||||++++.+.
T Consensus        97 v~Ey~~~~~~~  107 (350)
T d1q5ka_          97 VLDYVPETVYR  107 (350)
T ss_dssp             EEECCSEEHHH
T ss_pred             EEeccCCccHH
Confidence            99999876433

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.21  E-value=1.1e-11  Score=109.88  Aligned_cols=89  Identities=18%  Similarity=0.202  Sum_probs=75.1

Q ss_pred             cCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCC-CCccceeeEEEeCCeeEEEEEc
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINH-KNLVKLLGCSITGPESLLVYEF  346 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~lv~Ey  346 (363)
                      ++|...+.||+|+||.||+|.. .+|+.||||++.....  ...+.+|++.+..++| +|++.+++++..+...++||||
T Consensus         5 ~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~   82 (293)
T d1csna_           5 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD--APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDL   82 (293)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT--SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEEC
T ss_pred             CceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccccC--cHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEe
Confidence            5688999999999999999996 5689999999865422  2347788999999965 8999999999999999999999


Q ss_pred             cCCCChhHHhhcCC
Q 017984          347 VPNQSLLDNLFDKM  360 (363)
Q Consensus       347 ~~~gsL~~~l~~~~  360 (363)
                      + +|+|.+++....
T Consensus        83 ~-~~~l~~~~~~~~   95 (293)
T d1csna_          83 L-GPSLEDLLDLCG   95 (293)
T ss_dssp             C-CCBHHHHHHHTT
T ss_pred             c-CCCHHHHHHhhc
Confidence            9 689999887543

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.19  E-value=5e-12  Score=112.79  Aligned_cols=89  Identities=22%  Similarity=0.303  Sum_probs=68.2

Q ss_pred             ccCCCcCceecccCceEEEEEEc-CC-CCEEEEEEeccC--ChhhHHHHHHHHHHHhcC---CCCCccceeeEEEe----
Q 017984          268 TNYFHESNKLGQGGSGSVYKGTL-PG-GEAVAVKRLFYN--TTQWVDHFFNEVNLISGI---NHKNLVKLLGCSIT----  336 (363)
Q Consensus       268 ~~~~~~~~~lg~G~~g~Vy~~~~-~~-g~~vavK~l~~~--~~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~----  336 (363)
                      .++|...+.||+|+||.||++.. .+ ++.||||+++..  .......+.+|+.+|+.|   +||||+++++++..    
T Consensus         6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~   85 (305)
T d1blxa_           6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD   85 (305)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred             cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccc
Confidence            46789999999999999999986 44 667999999642  222233466787777655   89999999998863    


Q ss_pred             -CCeeEEEEEccCCCChhHHh
Q 017984          337 -GPESLLVYEFVPNQSLLDNL  356 (363)
Q Consensus       337 -~~~~~lv~Ey~~~gsL~~~l  356 (363)
                       ...++++|||++++++....
T Consensus        86 ~~~~~~~~~e~~~~~~~~~~~  106 (305)
T d1blxa_          86 RETKLTLVFEHVDQDLTTYLD  106 (305)
T ss_dssp             SEEEEEEEEECCSCBHHHHHH
T ss_pred             cCceEEEEEEeccCCchhhhh
Confidence             34789999999987765443

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.11  E-value=6.7e-11  Score=105.04  Aligned_cols=86  Identities=26%  Similarity=0.329  Sum_probs=68.2

Q ss_pred             cCCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcCCCCCccce-eeEEEeCCeeEEEEEc
Q 017984          269 NYFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGINHKNLVKL-LGCSITGPESLLVYEF  346 (363)
Q Consensus       269 ~~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h~niv~l-~~~~~~~~~~~lv~Ey  346 (363)
                      ++|...+.||+|+||.||+|.. .+|+.||||++.....  ..++.+|+++++.++|+|++.+ ..+....+..++||||
T Consensus         7 ~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~   84 (299)
T d1ckia_           7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL   84 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTT--SCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred             CEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhcc--CHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEE
Confidence            4688999999999999999986 5689999999875432  2358899999999987765555 5556778889999999


Q ss_pred             cCCCChhHHhh
Q 017984          347 VPNQSLLDNLF  357 (363)
Q Consensus       347 ~~~gsL~~~l~  357 (363)
                      +. |+|.+.+.
T Consensus        85 ~~-~~l~~~~~   94 (299)
T d1ckia_          85 LG-PSLEDLFN   94 (299)
T ss_dssp             CC-CBHHHHHH
T ss_pred             cC-Cchhhhhh
Confidence            95 56666554

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.64  E-value=1.8e-08  Score=82.81  Aligned_cols=79  Identities=14%  Similarity=0.127  Sum_probs=60.1

Q ss_pred             CcCceecccCceEEEEEEcCCCCEEEEEEeccCCh------------------hhHHHHHHHHHHHhcCCCCCccceeeE
Q 017984          272 HESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTT------------------QWVDHFFNEVNLISGINHKNLVKLLGC  333 (363)
Q Consensus       272 ~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~------------------~~~~~~~~E~~~l~~l~h~niv~l~~~  333 (363)
                      ...++||+|+||.||+|...+|+.||||+++....                  .....+.+|...+.++.|++++..+++
T Consensus         3 ~vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~   82 (191)
T d1zara2           3 AIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAW   82 (191)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEE
T ss_pred             hhCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEe
Confidence            35789999999999999988899999998753210                  112345678899999999999988764


Q ss_pred             EEeCCeeEEEEEccCCCChhH
Q 017984          334 SITGPESLLVYEFVPNQSLLD  354 (363)
Q Consensus       334 ~~~~~~~~lv~Ey~~~gsL~~  354 (363)
                      .    ..+|+|||+++..+.+
T Consensus        83 ~----~~~lvme~~~~~~~~~   99 (191)
T d1zara2          83 E----GNAVLMELIDAKELYR   99 (191)
T ss_dssp             E----TTEEEEECCCCEEGGG
T ss_pred             c----CCEEEEEeeccccccc
Confidence            2    2379999998876644

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.55  E-value=4.8e-08  Score=88.38  Aligned_cols=82  Identities=20%  Similarity=0.174  Sum_probs=64.2

Q ss_pred             CCCcCceecccCceEEEEEEc-CCCCEEEEEEeccCChhhHHHHHHHHHHHhcCC-----------CCCccceeeEEEe-
Q 017984          270 YFHESNKLGQGGSGSVYKGTL-PGGEAVAVKRLFYNTTQWVDHFFNEVNLISGIN-----------HKNLVKLLGCSIT-  336 (363)
Q Consensus       270 ~~~~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~l~~~~~~-  336 (363)
                      +|...++||+|+||.||+++. .+|+.||||+++.. ....+.+.+|+.+++.++           |+||+++++++.. 
T Consensus        14 rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~-~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~   92 (362)
T d1q8ya_          14 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK   92 (362)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred             cEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEecc-ccchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeec
Confidence            488899999999999999996 57999999999754 333467889999888775           5789999988754 


Q ss_pred             -CCeeEEEEEccCCCCh
Q 017984          337 -GPESLLVYEFVPNQSL  352 (363)
Q Consensus       337 -~~~~~lv~Ey~~~gsL  352 (363)
                       ....+++|+++..+..
T Consensus        93 ~~~~~~~~~~~~~~~~~  109 (362)
T d1q8ya_          93 GPNGVHVVMVFEVLGEN  109 (362)
T ss_dssp             ETTEEEEEEEECCCCEE
T ss_pred             cccceeeeeeecccccc
Confidence             4567777777655443

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=95.13  E-value=0.025  Score=46.84  Aligned_cols=93  Identities=13%  Similarity=-0.013  Sum_probs=60.5

Q ss_pred             HHHHhccCCCcCceecccCceEEEEEEcCCCCEEEEEEeccCChhhHHHHHHHHHHHhcCC-CCCccceeeEEEeCCeeE
Q 017984          263 TLEKATNYFHESNKLGQGGSGSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGIN-HKNLVKLLGCSITGPESL  341 (363)
Q Consensus       263 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~  341 (363)
                      ++......+......+-++...||+.... ++.+.+|+...........+.+|..++..+. +--+.+++.+...++..+
T Consensus         8 ~l~~~~~~~~~~~~~~G~s~~~v~rv~~~-~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~   86 (263)
T d1j7la_           8 ELKKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSN   86 (263)
T ss_dssp             HHHHHHTTSEEEECSCCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEE
T ss_pred             HHHHhhhceEEEEcCCCCCCCcEEEEEeC-CCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCceE
Confidence            34444445544443333334689988754 5567788876443333345778888877663 333567777778888999


Q ss_pred             EEEEccCCCChhHHh
Q 017984          342 LVYEFVPNQSLLDNL  356 (363)
Q Consensus       342 lv~Ey~~~gsL~~~l  356 (363)
                      +|||+++|.++.+..
T Consensus        87 lv~~~l~G~~~~~~~  101 (263)
T d1j7la_          87 LLMSEADGVLCSEEY  101 (263)
T ss_dssp             EEEECCSSEEHHHHT
T ss_pred             EEEEecccccccccc
Confidence            999999998876544

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=91.55  E-value=0.36  Score=39.13  Aligned_cols=76  Identities=20%  Similarity=0.220  Sum_probs=53.3

Q ss_pred             eecccCc-eEEEEEEcCCCCEEEEEEeccCChhhHHHHHHHHHHHhcCC--CCCccceeeEEEeCCeeEEEEEccCCCCh
Q 017984          276 KLGQGGS-GSVYKGTLPGGEAVAVKRLFYNTTQWVDHFFNEVNLISGIN--HKNLVKLLGCSITGPESLLVYEFVPNQSL  352 (363)
Q Consensus       276 ~lg~G~~-g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~lv~Ey~~~gsL  352 (363)
                      .+..|.. +.||+...+++..+.+|.-.....   ..+..|..+++.+.  .-.+.+++.+...++..++||||++|.++
T Consensus        17 ~~~~G~s~~~v~r~~~~~~~~~vlK~~~~~~~---~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~   93 (255)
T d1nd4a_          17 QQTIGCSDAAVFRLSAQGRPVLFVKTDLSGAL---NELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDL   93 (255)
T ss_dssp             ECSCTTSSCEEEEEECTTSCCEEEEEECSCTT---SCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEET
T ss_pred             EcCCcccCCeEEEEEeCCCCEEEEEeCCccCH---hHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeecccc
Confidence            3444443 678999887787888898765432   23667777777653  23356677777788889999999998776


Q ss_pred             hH
Q 017984          353 LD  354 (363)
Q Consensus       353 ~~  354 (363)
                      .+
T Consensus        94 ~~   95 (255)
T d1nd4a_          94 LS   95 (255)
T ss_dssp             TT
T ss_pred             cc
Confidence            44