Query 017985
Match_columns 363
No_of_seqs 290 out of 2342
Neff 6.7
Searched_HMMs 46136
Date Fri Mar 29 05:09:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017985.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017985hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PTZ00341 Ring-infected erythro 100.0 2.6E-67 5.6E-72 551.7 33.0 320 17-341 562-898 (1136)
2 PF14308 DnaJ-X: X-domain of D 100.0 3E-50 6.4E-55 369.6 22.1 191 157-347 2-194 (204)
3 KOG0691 Molecular chaperone (D 100.0 2.6E-46 5.6E-51 357.3 23.5 288 24-336 1-291 (296)
4 PTZ00475 RESA-like protein; Pr 100.0 1.4E-39 3E-44 304.5 22.7 234 102-337 2-279 (282)
5 COG0484 DnaJ DnaJ-class molecu 99.9 7.1E-26 1.5E-30 221.8 9.5 74 26-99 2-75 (371)
6 KOG0713 Molecular chaperone (D 99.9 4.4E-25 9.5E-30 211.5 8.1 77 24-100 12-88 (336)
7 KOG0712 Molecular chaperone (D 99.9 5.1E-22 1.1E-26 192.3 7.5 87 26-115 2-88 (337)
8 PRK14288 chaperone protein Dna 99.8 1.5E-21 3.2E-26 194.3 9.3 73 27-99 2-74 (369)
9 PTZ00037 DnaJ_C chaperone prot 99.8 4.7E-21 1E-25 193.2 9.4 92 21-116 21-113 (421)
10 PRK14296 chaperone protein Dna 99.8 5.4E-21 1.2E-25 190.5 9.0 71 27-98 3-73 (372)
11 PRK14286 chaperone protein Dna 99.8 6.7E-21 1.4E-25 189.8 9.5 72 27-98 3-74 (372)
12 PRK14277 chaperone protein Dna 99.8 3.4E-20 7.4E-25 185.6 9.6 75 24-98 1-75 (386)
13 PRK14282 chaperone protein Dna 99.8 3.8E-20 8.2E-25 184.3 9.4 72 27-98 3-75 (369)
14 PRK14287 chaperone protein Dna 99.8 4.3E-20 9.3E-25 184.0 9.7 71 27-98 3-73 (371)
15 PRK14298 chaperone protein Dna 99.8 3.5E-20 7.7E-25 184.9 9.0 74 25-99 2-75 (377)
16 PRK14285 chaperone protein Dna 99.8 4.2E-20 9.2E-25 183.7 9.0 71 28-98 3-73 (365)
17 PRK14276 chaperone protein Dna 99.8 5.1E-20 1.1E-24 184.1 9.2 71 27-98 3-73 (380)
18 PRK14297 chaperone protein Dna 99.8 5.9E-20 1.3E-24 183.6 8.9 72 27-98 3-74 (380)
19 PRK14294 chaperone protein Dna 99.8 8.2E-20 1.8E-24 181.7 9.5 73 27-99 3-75 (366)
20 PRK14284 chaperone protein Dna 99.8 1.1E-19 2.4E-24 182.2 9.3 71 28-98 1-71 (391)
21 PRK14301 chaperone protein Dna 99.8 1.6E-19 3.5E-24 180.0 8.9 73 27-99 3-75 (373)
22 PRK14299 chaperone protein Dna 99.8 2.6E-19 5.6E-24 173.0 9.9 70 27-97 3-72 (291)
23 PRK14279 chaperone protein Dna 99.8 1.3E-19 2.8E-24 181.8 7.7 69 27-95 8-76 (392)
24 PRK14280 chaperone protein Dna 99.8 2.2E-19 4.8E-24 179.2 9.3 70 28-98 4-73 (376)
25 PHA03102 Small T antigen; Revi 99.8 1.9E-19 4.2E-24 157.4 7.7 97 28-129 5-103 (153)
26 PRK14278 chaperone protein Dna 99.8 1.9E-19 4.1E-24 179.8 8.7 68 28-96 3-70 (378)
27 PRK10767 chaperone protein Dna 99.8 2.8E-19 6E-24 178.3 9.6 73 27-99 3-75 (371)
28 PRK14295 chaperone protein Dna 99.8 3.2E-19 6.9E-24 178.7 9.2 72 27-98 8-83 (389)
29 KOG0718 Molecular chaperone (D 99.8 7.2E-19 1.6E-23 173.8 11.0 106 26-166 7-115 (546)
30 PRK14283 chaperone protein Dna 99.8 2.9E-19 6.3E-24 178.5 8.1 74 24-98 1-74 (378)
31 KOG0716 Molecular chaperone (D 99.8 2.5E-19 5.3E-24 167.2 6.2 74 25-98 28-101 (279)
32 PRK14290 chaperone protein Dna 99.8 5.6E-19 1.2E-23 175.7 9.2 71 28-98 3-74 (365)
33 PRK14291 chaperone protein Dna 99.8 4.1E-19 8.9E-24 177.6 8.2 70 28-98 3-72 (382)
34 PRK14281 chaperone protein Dna 99.8 8.1E-19 1.8E-23 176.3 8.9 71 28-98 3-73 (397)
35 PRK14289 chaperone protein Dna 99.8 1.3E-18 2.7E-23 174.4 9.5 73 26-98 3-75 (386)
36 TIGR02349 DnaJ_bact chaperone 99.8 1.3E-18 2.8E-23 172.5 8.7 70 29-99 1-70 (354)
37 PRK14292 chaperone protein Dna 99.8 1.8E-18 3.9E-23 172.4 9.1 88 28-116 2-97 (371)
38 PRK14300 chaperone protein Dna 99.7 5.2E-18 1.1E-22 169.2 8.1 70 28-98 3-72 (372)
39 PRK14293 chaperone protein Dna 99.7 7.3E-18 1.6E-22 168.2 8.9 70 28-98 3-72 (374)
40 KOG0715 Molecular chaperone (D 99.7 6.9E-18 1.5E-22 162.6 8.3 87 28-116 43-129 (288)
41 PF00226 DnaJ: DnaJ domain; I 99.7 9.2E-18 2E-22 125.9 6.8 63 29-91 1-64 (64)
42 KOG0717 Molecular chaperone (D 99.7 6.9E-18 1.5E-22 166.9 6.9 69 27-95 7-76 (508)
43 PRK10266 curved DNA-binding pr 99.7 1.5E-17 3.3E-22 161.8 8.9 68 28-96 4-71 (306)
44 KOG0719 Molecular chaperone (D 99.7 3.7E-17 7.9E-22 149.5 7.1 88 28-115 14-104 (264)
45 KOG0721 Molecular chaperone (D 99.7 2.4E-16 5.3E-21 142.9 8.3 76 26-101 97-172 (230)
46 TIGR03835 termin_org_DnaJ term 99.6 7.9E-16 1.7E-20 160.8 9.1 71 28-99 2-72 (871)
47 smart00271 DnaJ DnaJ molecular 99.6 7.8E-16 1.7E-20 113.6 6.5 58 28-85 1-59 (60)
48 COG2214 CbpA DnaJ-class molecu 99.6 1.5E-15 3.2E-20 137.4 7.7 71 24-94 2-73 (237)
49 cd06257 DnaJ DnaJ domain or J- 99.6 2.7E-15 5.9E-20 108.7 6.9 55 29-83 1-55 (55)
50 PRK00294 hscB co-chaperone Hsc 99.5 5E-13 1.1E-17 119.8 15.3 67 26-92 2-75 (173)
51 PRK05014 hscB co-chaperone Hsc 99.5 2.9E-13 6.2E-18 121.3 13.4 65 28-92 1-72 (171)
52 KOG0624 dsRNA-activated protei 99.5 4.4E-14 9.5E-19 136.4 5.2 69 25-93 391-462 (504)
53 PRK03578 hscB co-chaperone Hsc 99.5 2.9E-13 6.4E-18 121.7 9.6 70 27-96 5-83 (176)
54 PRK01356 hscB co-chaperone Hsc 99.4 1.8E-13 3.8E-18 122.0 7.9 67 28-94 2-73 (166)
55 KOG0714 Molecular chaperone (D 99.4 6.4E-13 1.4E-17 125.8 6.2 72 28-99 3-75 (306)
56 KOG0550 Molecular chaperone (D 99.4 7.7E-13 1.7E-17 130.3 6.0 92 22-113 367-461 (486)
57 KOG0722 Molecular chaperone (D 99.4 4.8E-13 1E-17 124.0 4.3 70 24-94 29-98 (329)
58 KOG0720 Molecular chaperone (D 99.3 3.4E-12 7.5E-17 126.8 6.1 68 27-95 234-301 (490)
59 PHA02624 large T antigen; Prov 99.2 1.5E-11 3.4E-16 127.6 7.5 84 28-115 11-98 (647)
60 COG5407 SEC63 Preprotein trans 99.2 2.3E-11 5E-16 120.5 6.5 73 28-100 98-175 (610)
61 PTZ00100 DnaJ chaperone protei 99.2 2.5E-11 5.5E-16 101.4 5.7 59 19-82 57-115 (116)
62 PRK09430 djlA Dna-J like membr 99.2 3.6E-11 7.7E-16 115.0 6.0 58 26-83 198-262 (267)
63 PRK01773 hscB co-chaperone Hsc 99.1 2.1E-10 4.5E-15 102.9 7.9 65 28-92 2-73 (173)
64 KOG1150 Predicted molecular ch 98.9 1.2E-09 2.6E-14 98.3 6.3 65 27-91 52-117 (250)
65 TIGR00714 hscB Fe-S protein as 98.9 3E-09 6.5E-14 94.1 7.0 55 40-94 3-62 (157)
66 COG5269 ZUO1 Ribosome-associat 98.9 2.6E-09 5.6E-14 100.2 6.5 86 25-110 40-131 (379)
67 KOG1789 Endocytosis protein RM 98.2 1.7E-06 3.7E-11 93.4 5.7 54 26-82 1279-1336(2235)
68 KOG0568 Molecular chaperone (D 98.1 2.6E-06 5.7E-11 78.6 4.6 57 27-84 46-103 (342)
69 KOG3192 Mitochondrial J-type c 97.7 9.9E-05 2.1E-09 64.5 6.1 86 23-108 3-97 (168)
70 KOG0723 Molecular chaperone (D 97.5 0.00019 4.2E-09 58.8 5.2 62 18-84 47-108 (112)
71 COG1076 DjlA DnaJ-domain-conta 96.0 0.0028 6.1E-08 57.0 1.5 54 28-81 113-173 (174)
72 COG1076 DjlA DnaJ-domain-conta 96.0 0.0052 1.1E-07 55.2 3.1 67 29-95 2-75 (174)
73 KOG0431 Auxilin-like protein a 94.9 0.03 6.4E-07 57.7 4.4 26 39-64 399-424 (453)
74 PF03656 Pam16: Pam16; InterP 91.7 0.37 8.1E-06 41.2 5.3 53 29-85 59-111 (127)
75 PF13446 RPT: A repeated domai 76.5 6.3 0.00014 28.9 4.8 26 29-54 6-31 (62)
76 KOG0724 Zuotin and related mol 73.1 3.2 7E-05 40.8 3.2 56 39-94 3-62 (335)
77 PF03207 OspD: Borrelia outer 59.7 69 0.0015 28.8 8.5 30 286-315 187-222 (254)
78 PF14687 DUF4460: Domain of un 56.5 24 0.00053 29.4 4.9 47 38-84 4-54 (112)
79 PF11833 DUF3353: Protein of u 54.6 15 0.00032 33.8 3.6 41 37-85 1-41 (194)
80 COG5552 Uncharacterized conser 42.3 1.6E+02 0.0035 22.9 7.7 64 28-96 3-66 (88)
81 PF07739 TipAS: TipAS antibiot 38.7 85 0.0018 25.3 5.6 52 35-95 51-104 (118)
82 COG1698 Uncharacterized protei 36.3 75 0.0016 25.6 4.5 36 298-333 10-48 (93)
83 KOG3442 Uncharacterized conser 26.6 83 0.0018 26.9 3.4 34 29-62 60-93 (132)
84 PF04719 TAFII28: hTAFII28-lik 26.0 1.2E+02 0.0026 24.4 4.1 52 291-343 18-70 (90)
85 PF07709 SRR: Seven Residue Re 23.0 69 0.0015 16.6 1.5 13 70-82 2-14 (14)
86 PF03685 UPF0147: Uncharacteri 22.0 1.4E+02 0.003 23.8 3.8 33 300-332 5-40 (85)
87 PF10041 DUF2277: Uncharacteri 21.6 3.9E+02 0.0085 20.9 6.0 34 29-62 4-37 (78)
88 PRK04330 hypothetical protein; 21.5 1.7E+02 0.0037 23.4 4.2 34 299-332 7-43 (88)
89 PF14891 Peptidase_M91: Effect 21.3 1.2E+02 0.0026 26.9 3.7 31 177-208 7-37 (174)
90 PF06412 TraD: Conjugal transf 20.7 83 0.0018 23.5 2.2 27 318-344 3-29 (65)
91 KOG0543 FKBP-type peptidyl-pro 20.4 9.3E+02 0.02 24.7 11.3 62 285-346 258-325 (397)
No 1
>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional
Probab=100.00 E-value=2.6e-67 Score=551.65 Aligned_cols=320 Identities=24% Similarity=0.412 Sum_probs=281.9
Q ss_pred CccccccccCCcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCC
Q 017985 17 SSGEKKAMVKDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKE 96 (363)
Q Consensus 17 ~~~~~~~~~~~~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~~a~~~f~~i~~AY~vLsd~~~R~~YD~~g~~ 96 (363)
....+..++++++||++|||+++||..+||+|||+||++||||++|++ .|.++|+.|++||+|||||.+|+.||+||..
T Consensus 562 ~~~~~t~~~~d~dYYdILGVs~dAS~~EIKKAYRKLAlkyHPDKN~~~-~A~ekFq~I~EAYeVLSDp~kRk~YD~~G~~ 640 (1136)
T PTZ00341 562 SEAAPTIEIPDTLFYDILGVGVNADMKEISERYFKLAENYYPPKRSGN-EGFHKFKKINEAYQILGDIDKKKMYNKFGYD 640 (1136)
T ss_pred ccccccccCCCCChHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-hHHHHHHHHHHHHHHhCCHHHHHHHhhcccc
Confidence 344456778899999999999999999999999999999999999864 6888999999999999999999999999999
Q ss_pred CCCCCCccchhhhhhhccccchHHHHHhHHHHHHhhhhhhhhc--cccHHHHhHHHHHHHHHHHHHHHHHHHHHHHcccc
Q 017985 97 GIPQDSMVDAAAVFGMIFGSEYFEDYIGQLALATMASVEVEED--KQDIEVYKHKIQEKMRAMQKEREEKLITILKNHLE 174 (363)
Q Consensus 97 ~~~~~~~~d~~~~f~~~fg~~~f~~~~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~q~~R~~~la~~L~~~l~ 174 (363)
+++.++++||..|| ++||++.|.+|+|.+.+++++...++.. +.+...+++.+.+.|++.|++|+.+||..|++||+
T Consensus 641 Gl~~~~~iDP~~Ff-mlFgse~F~dYiG~l~iatl~k~~fe~~~s~~d~~~~~e~l~e~m~~~QkeRE~kLA~~LkdRL~ 719 (1136)
T PTZ00341 641 GIKGVNFIHPSIFY-LLASLEKFADFTGSPQIVTLLKFFFEKKLSMNDLDNKSEHLLKFMEQYQKEREAHISENLINILQ 719 (1136)
T ss_pred ccCCCCccCHHHHH-HHhhhHHHHHhcCCHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98888999999877 7899999999999999999877654432 23444456778899999999999999999999999
Q ss_pred ccccCChhHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhccCCcccchhhHHHHHHhhhhhHHHHHHHHhhHH
Q 017985 175 PFVDGRADEFVKWANAEARRLSGAAFGEAMLHTIGYIYTRRAAKELGKDKRYMKVPFLAEWVRDKGHLIKSQVSAASGAV 254 (363)
Q Consensus 175 ~~v~~~~~~~~~~~~~Ea~~L~~~sfG~~iL~~IG~~Y~~~A~~~l~~~~~~lgv~~~~~~~r~k~~~~k~~~~~~~sa~ 254 (363)
+||+|+. .|...+..||+.|+.+|||.+|||+|||||.++|++||+++++ |+++++.+++.++.+++++++.+++++
T Consensus 720 ~YVdgd~-~w~~~~e~Ei~~L~~sSFG~~IL~tIGwiY~n~A~~fL~~~k~--g~~kl~~r~k~n~~~v~~~~n~lss~l 796 (1136)
T PTZ00341 720 PCIAGDR-KWDVPIIDKIEELKGSPFDIAIIDSIGWIFKHVAKSHLKKPKK--AAKKLEQRSKANKEELANENNKLMNIL 796 (1136)
T ss_pred HHhcccH-HHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhccch--hHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 9999986 5999999999999999999999999999999999999999877 677888899999999999999999999
Q ss_pred -HHHHHHHHHHHhccc----cccHH------HHH----HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCCCCCHH
Q 017985 255 -SLIQIQEELKKLNQL----ENKEE------NLM----KAIEAKKDAMLQSLWQINVVDIETTLSRVCQAVLKDPSVSKE 319 (363)
Q Consensus 255 -~~~~~~~~~~k~~~~----~~~ee------~~~----~~~~~~~~~~L~a~w~~~~~DIe~tlr~Vc~kVL~D~~V~~~ 319 (363)
+++.+++++.+++.+ ....+ ++. ......++++|.++|+++++|||+|||.||++||.|++||.+
T Consensus 797 kda~~t~eq~nki~~n~En~t~~~~nen~~k~i~~l~~eee~~ilgkiL~~iw~isl~DIE~TVR~VCekVL~Dk~Vd~k 876 (1136)
T PTZ00341 797 KEYFGNNEQINSITYNFENINLNEDNENGSKKILDLNHKDQKEIFEEIISYIVDISLSDIENTAKNAAEQILSDEGLDEK 876 (1136)
T ss_pred HHHHhhHHHHHHhhhhhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHH
Confidence 999999999886521 11110 000 113444789999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhchhc
Q 017985 320 TLKLRAKALKKLGTIFQGAKAA 341 (363)
Q Consensus 320 ~R~~RA~aL~~LG~if~~~~~~ 341 (363)
+|++||+||++||.+|++++..
T Consensus 877 tRikRAeaLkiLG~iMqk~a~~ 898 (1136)
T PTZ00341 877 KLKKRAESLKKLANAIEKYAGG 898 (1136)
T ss_pred HHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999998764
No 2
>PF14308 DnaJ-X: X-domain of DnaJ-containing
Probab=100.00 E-value=3e-50 Score=369.61 Aligned_cols=191 Identities=39% Similarity=0.578 Sum_probs=182.4
Q ss_pred HHHHHHHHHHHHHHccccccccCChhHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhccCCcccchhhHHHHH
Q 017985 157 MQKEREEKLITILKNHLEPFVDGRADEFVKWANAEARRLSGAAFGEAMLHTIGYIYTRRAAKELGKDKRYMKVPFLAEWV 236 (363)
Q Consensus 157 ~q~~R~~~la~~L~~~l~~~v~~~~~~~~~~~~~Ea~~L~~~sfG~~iL~~IG~~Y~~~A~~~l~~~~~~lgv~~~~~~~ 236 (363)
.|++|+.+||.+|++||+|||+|+.+.|..+++.||++|+.+|||.+|||+|||||.++|++||++..+|+|++++++++
T Consensus 2 ~q~~R~~~La~~L~~rL~~yv~~~~~~f~~~~~~Ea~~L~~~sFg~~iL~~IG~vY~~~A~~~l~~~~~~lG~~~~~~~~ 81 (204)
T PF14308_consen 2 EQKEREVELAEKLRDRLQPYVDGDKEEFKEKMEEEAEDLKEESFGVEILHSIGWVYENKAKQFLGKKKTFLGIGGFFARM 81 (204)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHhcccccChHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhHHHHHHHHhhHHHHHHHHHHHHHhcc--ccccHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCC
Q 017985 237 RDKGHLIKSQVSAASGAVSLIQIQEELKKLNQ--LENKEENLMKAIEAKKDAMLQSLWQINVVDIETTLSRVCQAVLKDP 314 (363)
Q Consensus 237 r~k~~~~k~~~~~~~sa~~~~~~~~~~~k~~~--~~~~ee~~~~~~~~~~~~~L~a~w~~~~~DIe~tlr~Vc~kVL~D~ 314 (363)
++|++.++++|+++++|++++++++++.+.+. ++.++++..++++...+++|.++|+++++|||+|||.||++||+|+
T Consensus 82 k~k~~~~k~~~~~~~sa~~~~~~~~~~~~~~~~~~~~~~e~~~~~e~~~~~~~L~~~w~~~~~DIe~Tlr~Vc~~VL~D~ 161 (204)
T PF14308_consen 82 KEKGRSVKNQFSTAKSALDAQSTMEELQKAEEKNGEENEEERAELEEEILGKMLDAIWKINKFDIESTLREVCDKVLYDK 161 (204)
T ss_pred HHhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 99999999999999999999999999999653 4567888888888889999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhchhcccccCC
Q 017985 315 SVSKETLKLRAKALKKLGTIFQGAKAAYSRENS 347 (363)
Q Consensus 315 ~V~~~~R~~RA~aL~~LG~if~~~~~~~~~~~~ 347 (363)
+||.++|++||+||++||++|+++++++++.++
T Consensus 162 ~V~~~~r~~RA~aL~~LG~if~~~~~~~~~~~~ 194 (204)
T PF14308_consen 162 GVDKETRLKRAEALKILGKIFQKVKRDKKEKEE 194 (204)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhcCCccccch
Confidence 999999999999999999999999999876654
No 3
>KOG0691 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.6e-46 Score=357.27 Aligned_cols=288 Identities=45% Similarity=0.631 Sum_probs=250.3
Q ss_pred ccCCcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCCCCCCCCc
Q 017985 24 MVKDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGIPQDSM 103 (363)
Q Consensus 24 ~~~~~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~~a~~~f~~i~~AY~vLsd~~~R~~YD~~g~~~~~~~~~ 103 (363)
|+.++|||+||||+++|+..+|++|||+.+++|||||||+||.|.++|+.+.+||+||+||..|..||.+|..+....+.
T Consensus 1 M~~~~dyY~lLgi~~~at~~eIkKaYr~kaL~~HPDKNp~dP~A~ekFq~L~eAy~VL~D~~~R~~YDk~~k~~~~~~~~ 80 (296)
T KOG0691|consen 1 MVKDTDYYDLLGISEDATDAEIKKAYRKKALQYHPDKNPGDPQAAEKFQELSEAYEVLSDEESRAAYDKLRKSGSSAQGR 80 (296)
T ss_pred CcccchHHHHhCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhhcccchhh
Confidence 56689999999999999999999999999999999999999999999999999999999999999999999988766688
Q ss_pred cchhhhhhhccccchHHHHHhHHHHHHhhhhhhhhccccHHHHhHHHHHHHHHHHHHHHHHHHHHHHccccccccCChhH
Q 017985 104 VDAAAVFGMIFGSEYFEDYIGQLALATMASVEVEEDKQDIEVYKHKIQEKMRAMQKEREEKLITILKNHLEPFVDGRADE 183 (363)
Q Consensus 104 ~d~~~~f~~~fg~~~f~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~R~~~la~~L~~~l~~~v~~~~~~ 183 (363)
.++.++|...||++.|..|+|.+...... .+.+.. +..++++....|.+|+.+|++.|+++|..|+++. +
T Consensus 81 ~d~~~~~r~~f~~dl~~~~~~~~a~~~~~-~e~~~e-------~~~~~~k~~~~~~er~~~l~~~~~~~l~~~~~~~-~- 150 (296)
T KOG0691|consen 81 EDQADGFRKKFGSDLFERERGALALLKES-EESELE-------RERLQEKFRAVQRERVDKLVEILREKLSEVVESV-E- 150 (296)
T ss_pred hhHHHHHHHHhhhhhhhhHHHHHhHHhhh-hhhhhh-------HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhh-h-
Confidence 99999999999999999999998888765 111111 1134557888999999999999999999999987 3
Q ss_pred HHHHHHHHHHHHhcCcchHHHHHHHHHHHHH-HHHHHhccCCcccchhhHHHHHHhhhhhHHHHHHHHhhHHHHHHHHHH
Q 017985 184 FVKWANAEARRLSGAAFGEAMLHTIGYIYTR-RAAKELGKDKRYMKVPFLAEWVRDKGHLIKSQVSAASGAVSLIQIQEE 262 (363)
Q Consensus 184 ~~~~~~~Ea~~L~~~sfG~~iL~~IG~~Y~~-~A~~~l~~~~~~lgv~~~~~~~r~k~~~~k~~~~~~~sa~~~~~~~~~ 262 (363)
+.++..|+..|..++||.+++|+||.+|.+ .|..++. .++++|+++.+.+.+.+|+.++.+|+++..++..+..+.+
T Consensus 151 -~~~~~~e~~~l~~e~~~~e~~~~~g~~y~~~~~~~~~~-~~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~e 228 (296)
T KOG0691|consen 151 -ERKLATEALQLQRERFGEELLHTIGRTYSRTKALKPIK-FRTSPGVSKLSEGSRAKGGALRAMWNLAAGAVALYGGQDE 228 (296)
T ss_pred -hhhhhHHHHHHHHhhhhHHHHHhhcccchhhHhhhccc-cccccCcchhhhcccccchhHHHHHhhhHHHHHHHHHHHH
Confidence 888999999999999999999999999996 5665554 4458899999999999999999999999999999999999
Q ss_pred HHHhccc--cccHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH
Q 017985 263 LKKLNQL--ENKEENLMKAIEAKKDAMLQSLWQINVVDIETTLSRVCQAVLKDPSVSKETLKLRAKALKKLGTIFQ 336 (363)
Q Consensus 263 ~~k~~~~--~~~ee~~~~~~~~~~~~~L~a~w~~~~~DIe~tlr~Vc~kVL~D~~V~~~~R~~RA~aL~~LG~if~ 336 (363)
+.++... ...++. .+......+++++++|+++.+||++||+.||++| +|++|+. .||.+|+
T Consensus 229 ~~~~~~~~~~~~e~~-~~~~~~~~~~~~~~~~~~s~~dies~l~~~~~~~-~d~~v~~-----------~i~~~~~ 291 (296)
T KOG0691|consen 229 MEKLLEALGEALEKR-AEYASAKTGKSLDTLWHGSSFDIESTLIRVCQKI-KDPSVPL-----------LIFQRFK 291 (296)
T ss_pred HHhhhcchHHHhhhc-hHHHHHhhcchhhhhhHhHHHHHHHHHHHHHHHh-cChHHHH-----------HHHHHHH
Confidence 9886542 112221 3344555788999999999999999999999999 9999997 7777777
No 4
>PTZ00475 RESA-like protein; Provisional
Probab=100.00 E-value=1.4e-39 Score=304.46 Aligned_cols=234 Identities=22% Similarity=0.335 Sum_probs=176.9
Q ss_pred CccchhhhhhhccccchHHHHHhHHHHHHhhhhhhhhc--cccHHHHhHHHHHHHHHHHHHHHHHHHHHHHccccccccC
Q 017985 102 SMVDAAAVFGMIFGSEYFEDYIGQLALATMASVEVEED--KQDIEVYKHKIQEKMRAMQKEREEKLITILKNHLEPFVDG 179 (363)
Q Consensus 102 ~~~d~~~~f~~~fg~~~f~~~~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~q~~R~~~la~~L~~~l~~~v~~ 179 (363)
..+||..+|.++||++.+.+|||++.++.++....+.+ .++.....+++.+.|++.|++||++||..|++||+|||+|
T Consensus 2 ~iIDP~~fF~mlFgSe~l~~YIG~L~ma~~v~l~fe~~~~~edi~~~~~~i~~~M~~~QkeRE~kLAl~LrdrLq~YVdg 81 (282)
T PTZ00475 2 IIIVPFIFFNLIFTSDMMYEYIENTKVPIFVKLFFGKSIFIEDIFYYVGMIMKEMMEGQNIREEEVAELLKDRLDLYIDN 81 (282)
T ss_pred ccccHHHHHHHHHhHHHHHHHHhHHHHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 46899999999999999999999999999987766554 3344556788999999999999999999999999999987
Q ss_pred ChhHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhccCCcccchhhHHHHH-----Hhhhh------hHHHHHH
Q 017985 180 RADEFVKWANAEARRLSGAAFGEAMLHTIGYIYTRRAAKELGKDKRYMKVPFLAEWV-----RDKGH------LIKSQVS 248 (363)
Q Consensus 180 ~~~~~~~~~~~Ea~~L~~~sfG~~iL~~IG~~Y~~~A~~~l~~~~~~lgv~~~~~~~-----r~k~~------~~k~~~~ 248 (363)
.+.|..+++.||++|+.+|||..|||+|||+|.|+|++|||..+.+ |++.....+ |...+ ..+...+
T Consensus 82 -~~ew~~~~e~Eak~L~~ssFg~~iLesIGwiY~Nva~~ylge~~~~-~l~~k~~~~~~~~~r~~rn~~~l~~~~~~~~~ 159 (282)
T PTZ00475 82 -EDEWEKLMENEISMLLKSSFSNFILESIGWTYENVSNIFLEEKANS-GINKKDIYLKEANERMIRNSIVLRQCKSRFIS 159 (282)
T ss_pred -hHHHHHHHHHHHHHHHhCcccHHHHHHhHHHHHHHHHHHHHHhhhh-hhhhHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999999999999998775 776543211 11111 1111223
Q ss_pred HHhhHHHHHHHH----HHHHH-------hcccccc----------------HHHHHHHH----HHHHHHHHHHHHHHhHH
Q 017985 249 AASGAVSLIQIQ----EELKK-------LNQLENK----------------EENLMKAI----EAKKDAMLQSLWQINVV 297 (363)
Q Consensus 249 ~~~sa~~~~~~~----~~~~k-------~~~~~~~----------------ee~~~~~~----~~~~~~~L~a~w~~~~~ 297 (363)
.+.+-+...... +..+. .++..+. .+++..+. ....+.+|..+.+++++
T Consensus 160 ~~~~~~~~~~~~n~~~~~~~~~~ss~~~~~d~~nn~~~~~~~~~~~~~n~~~~ni~~l~~~ek~kil~~il~~i~~i~l~ 239 (282)
T PTZ00475 160 IITNYYPFKEQNNPFIKQAQYVSSSNYVLDDIINNIDYSIDNIHRAIDNLYYEHILNLLEEEKNEILEEILRNILKIILC 239 (282)
T ss_pred HHHhhccchhhhhhHHHHhhhcccccccccccccchhhhhhhhhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 333322221100 00110 0000000 01122222 12257789999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh
Q 017985 298 DIETTLSRVCQAVLKDPSVSKETLKLRAKALKKLGTIFQG 337 (363)
Q Consensus 298 DIe~tlr~Vc~kVL~D~~V~~~~R~~RA~aL~~LG~if~~ 337 (363)
|||.|||.||++||+|+|||.++|++||++|.+||.+|..
T Consensus 240 DIE~Tvk~~a~~vl~d~~vd~~~~~kRa~~l~~LG~~~l~ 279 (282)
T PTZ00475 240 DVETTVRRSAQKVLQNAEGDTNLMLKRAKGLQSLGKMILQ 279 (282)
T ss_pred HHHHHHHHHHHHHhhccCccHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999865
No 5
>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
Probab=99.93 E-value=7.1e-26 Score=221.83 Aligned_cols=74 Identities=54% Similarity=0.905 Sum_probs=70.8
Q ss_pred CCcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCCCCC
Q 017985 26 KDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGIP 99 (363)
Q Consensus 26 ~~~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~~a~~~f~~i~~AY~vLsd~~~R~~YD~~g~~~~~ 99 (363)
..+|||+||||+++||.+|||+|||+||++||||+|+++++|+++|++|++||+|||||++|+.||+||..+..
T Consensus 2 ~~~dyYeiLGV~k~As~~EIKkAYRkLA~kyHPD~n~g~~~AeeKFKEI~eAYEVLsD~eKRa~YD~fG~~~~~ 75 (371)
T COG0484 2 AKRDYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNPGDKEAEEKFKEINEAYEVLSDPEKRAAYDQFGHAGFK 75 (371)
T ss_pred CccchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHhhccCccccc
Confidence 45799999999999999999999999999999999998999999999999999999999999999999998764
No 6
>KOG0713 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.91 E-value=4.4e-25 Score=211.48 Aligned_cols=77 Identities=49% Similarity=0.821 Sum_probs=73.1
Q ss_pred ccCCcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCCCCCC
Q 017985 24 MVKDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGIPQ 100 (363)
Q Consensus 24 ~~~~~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~~a~~~f~~i~~AY~vLsd~~~R~~YD~~g~~~~~~ 100 (363)
....+|||+||||+++|+..|||+|||+||++|||||||++|.|.+.|+.|+.||+|||||++|+.||.||.+++..
T Consensus 12 v~~~rDfYelLgV~k~Asd~eIKkAYRKLALk~HPDkNpddp~A~e~F~~in~AYEVLsDpekRk~YD~~GEegL~~ 88 (336)
T KOG0713|consen 12 VLAGRDFYELLGVPKNASDQEIKKAYRKLALKYHPDKNPDDPNANEKFKEINAAYEVLSDPEKRKHYDTYGEEGLKD 88 (336)
T ss_pred hhcCCCHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHhhhHhhhcc
Confidence 34568999999999999999999999999999999999999999999999999999999999999999999988764
No 7
>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.86 E-value=5.1e-22 Score=192.32 Aligned_cols=87 Identities=51% Similarity=0.764 Sum_probs=73.9
Q ss_pred CCcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCCCCCCCCccc
Q 017985 26 KDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGIPQDSMVD 105 (363)
Q Consensus 26 ~~~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~~a~~~f~~i~~AY~vLsd~~~R~~YD~~g~~~~~~~~~~d 105 (363)
.++.||++|||+++||.+|||+|||+|+++|||||||+ +.++|++|+.||+|||||++|+.||+||.+++..++...
T Consensus 2 ~~~~~y~il~v~~~As~~eikkayrkla~k~HpDkn~~---~~ekfkei~~AyevLsd~ekr~~yD~~g~~~~~~g~~~~ 78 (337)
T KOG0712|consen 2 KNTKLYDILGVSPDASEEEIKKAYRKLALKYHPDKNPD---AGEKFKEISQAYEVLSDPEKREIYDQYGEEGLQGGGGGG 78 (337)
T ss_pred cccccceeeccCCCcCHHHHHHHHHHHHHHhCCCCCcc---HHHHHHHHHHHHHHhcCHHHHHHHHhhhhhhhcccCCCC
Confidence 56889999999999999999999999999999999986 789999999999999999999999999998875443221
Q ss_pred hhhhhhhccc
Q 017985 106 AAAVFGMIFG 115 (363)
Q Consensus 106 ~~~~f~~~fg 115 (363)
....|..+|+
T Consensus 79 g~~~f~~~F~ 88 (337)
T KOG0712|consen 79 GFGGFSQFFG 88 (337)
T ss_pred CCccHHHhcc
Confidence 1111666665
No 8
>PRK14288 chaperone protein DnaJ; Provisional
Probab=99.85 E-value=1.5e-21 Score=194.32 Aligned_cols=73 Identities=42% Similarity=0.749 Sum_probs=68.8
Q ss_pred CcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCCCCC
Q 017985 27 DTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGIP 99 (363)
Q Consensus 27 ~~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~~a~~~f~~i~~AY~vLsd~~~R~~YD~~g~~~~~ 99 (363)
..|||+||||+++||.+|||+|||+||++||||+|+.+++|+++|++|++||+||+||.+|+.||+||..+..
T Consensus 2 ~~dyY~vLgv~~~As~~eIkkayrkla~k~HPD~~~~~~~a~~~f~~i~~AYevLsd~~kR~~YD~~G~~~~~ 74 (369)
T PRK14288 2 ELSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKEAEEKFKLINEAYGVLSDEKKRALYDRYGKKGLN 74 (369)
T ss_pred CCChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHHhccHHHHHHHHHhcccccc
Confidence 3699999999999999999999999999999999987788999999999999999999999999999987543
No 9
>PTZ00037 DnaJ_C chaperone protein; Provisional
Probab=99.84 E-value=4.7e-21 Score=193.23 Aligned_cols=92 Identities=42% Similarity=0.707 Sum_probs=77.0
Q ss_pred cccccCCcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCCCCCC
Q 017985 21 KKAMVKDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGIPQ 100 (363)
Q Consensus 21 ~~~~~~~~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~~a~~~f~~i~~AY~vLsd~~~R~~YD~~g~~~~~~ 100 (363)
.+.-+...|||++|||+++||.+|||+|||+||++||||+|++ .++|++|++||+||+||.+|+.||.||..++..
T Consensus 21 ~~~~~~~~d~Y~vLGV~~~As~~eIKkAYrkla~k~HPDk~~~----~e~F~~i~~AYevLsD~~kR~~YD~~G~~~~~~ 96 (421)
T PTZ00037 21 RKREVDNEKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGD----PEKFKEISRAYEVLSDPEKRKIYDEYGEEGLEG 96 (421)
T ss_pred ccccccchhHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCch----HHHHHHHHHHHHHhccHHHHHHHhhhcchhccc
Confidence 4444567899999999999999999999999999999999862 479999999999999999999999999876532
Q ss_pred C-Cccchhhhhhhcccc
Q 017985 101 D-SMVDAAAVFGMIFGS 116 (363)
Q Consensus 101 ~-~~~d~~~~f~~~fg~ 116 (363)
. ...++.++|..+||+
T Consensus 97 ~~~~~d~~d~f~~~Fgg 113 (421)
T PTZ00037 97 GEQPADASDLFDLIFGG 113 (421)
T ss_pred CCCCcchhhhHHHhhcc
Confidence 1 234556677777764
No 10
>PRK14296 chaperone protein DnaJ; Provisional
Probab=99.83 E-value=5.4e-21 Score=190.49 Aligned_cols=71 Identities=41% Similarity=0.647 Sum_probs=67.0
Q ss_pred CcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCCCC
Q 017985 27 DTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGI 98 (363)
Q Consensus 27 ~~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~~a~~~f~~i~~AY~vLsd~~~R~~YD~~g~~~~ 98 (363)
..|||++|||+++|+.+|||+|||+||++||||+|+ ++.|.++|++|++||+|||||++|+.||+||..++
T Consensus 3 ~~dyY~~Lgv~~~a~~~eik~ayrkla~~~HPD~n~-~~~a~~~F~~i~~AyevLsD~~KR~~YD~~G~~~~ 73 (372)
T PRK14296 3 KKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNK-SPDAHDKMVEINEAADVLLDKDKRKQYDQFGHAAF 73 (372)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CchHHHHHHHHHHHHHHhcCHHHhhhhhhccchhh
Confidence 469999999999999999999999999999999997 57899999999999999999999999999998654
No 11
>PRK14286 chaperone protein DnaJ; Provisional
Probab=99.83 E-value=6.7e-21 Score=189.84 Aligned_cols=72 Identities=47% Similarity=0.824 Sum_probs=68.3
Q ss_pred CcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCCCC
Q 017985 27 DTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGI 98 (363)
Q Consensus 27 ~~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~~a~~~f~~i~~AY~vLsd~~~R~~YD~~g~~~~ 98 (363)
+.|||++|||+++||.+|||+|||+||++||||+|+++++|.++|++|++||+||+||.+|+.||+||.+++
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~ 74 (372)
T PRK14286 3 ERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPKKRQAYDQFGKAGV 74 (372)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHHhCchhh
Confidence 469999999999999999999999999999999998778899999999999999999999999999998654
No 12
>PRK14277 chaperone protein DnaJ; Provisional
Probab=99.81 E-value=3.4e-20 Score=185.62 Aligned_cols=75 Identities=47% Similarity=0.838 Sum_probs=70.0
Q ss_pred ccCCcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCCCC
Q 017985 24 MVKDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGI 98 (363)
Q Consensus 24 ~~~~~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~~a~~~f~~i~~AY~vLsd~~~R~~YD~~g~~~~ 98 (363)
|+...|||++|||+++||.+|||+|||+||++||||+|++++.|+++|++|++||+||+||.+|+.||+||.+++
T Consensus 1 ~~~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~~ 75 (386)
T PRK14277 1 MAAKKDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEILSDPQKRAQYDQFGHAAF 75 (386)
T ss_pred CCCCCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhCCHHHHHHHHhhccccc
Confidence 345579999999999999999999999999999999999888899999999999999999999999999998654
No 13
>PRK14282 chaperone protein DnaJ; Provisional
Probab=99.81 E-value=3.8e-20 Score=184.31 Aligned_cols=72 Identities=43% Similarity=0.778 Sum_probs=67.2
Q ss_pred CcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hHHHHHHHHHHHHHHHcCChhHHHHHhhcCCCCC
Q 017985 27 DTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGD-PKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGI 98 (363)
Q Consensus 27 ~~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~-~~a~~~f~~i~~AY~vLsd~~~R~~YD~~g~~~~ 98 (363)
..|||++|||+++||.+|||+|||+|+++||||+|+++ +.|.++|++|++||+||+||.+|+.||+||..+.
T Consensus 3 ~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~g~~~~ 75 (369)
T PRK14282 3 KKDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGYVGE 75 (369)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCccchhHHHHHHHHHHHHHHHhcChhhHHHHhhcCcccc
Confidence 46999999999999999999999999999999999864 6788999999999999999999999999998654
No 14
>PRK14287 chaperone protein DnaJ; Provisional
Probab=99.81 E-value=4.3e-20 Score=184.01 Aligned_cols=71 Identities=46% Similarity=0.746 Sum_probs=66.8
Q ss_pred CcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCCCC
Q 017985 27 DTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGI 98 (363)
Q Consensus 27 ~~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~~a~~~f~~i~~AY~vLsd~~~R~~YD~~g~~~~ 98 (363)
..|||++|||+++||.+|||+|||+||++||||+|+ +++++++|++|++||++|+||.+|+.||+||.++.
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~-~~~~~~~f~~i~~Ay~~L~d~~kR~~YD~~G~~~~ 73 (371)
T PRK14287 3 KRDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNK-APDAEDKFKEVKEAYDTLSDPQKKAHYDQFGHTDP 73 (371)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-ChhHHHHHHHHHHHHHHhCcHhHHHHHHhhCCccc
Confidence 369999999999999999999999999999999997 57788999999999999999999999999998754
No 15
>PRK14298 chaperone protein DnaJ; Provisional
Probab=99.81 E-value=3.5e-20 Score=184.92 Aligned_cols=74 Identities=49% Similarity=0.794 Sum_probs=68.1
Q ss_pred cCCcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCCCCC
Q 017985 25 VKDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGIP 99 (363)
Q Consensus 25 ~~~~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~~a~~~f~~i~~AY~vLsd~~~R~~YD~~g~~~~~ 99 (363)
....|||+||||+++||.+|||+|||+||++||||+|+ ++.+.++|++|++||+||+||.+|+.||+||..++.
T Consensus 2 ~~~~d~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~-~~~~~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~ 75 (377)
T PRK14298 2 ATTRDYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNK-EPDAEEKFKEISEAYAVLSDAEKRAQYDRFGHAGID 75 (377)
T ss_pred CCCCCHHHhhCCCCCCCHHHHHHHHHHHHHHhCccccC-ChhHHHHHHHHHHHHHHhcchHhhhhhhhcCccccc
Confidence 34579999999999999999999999999999999997 577889999999999999999999999999986543
No 16
>PRK14285 chaperone protein DnaJ; Provisional
Probab=99.81 E-value=4.2e-20 Score=183.67 Aligned_cols=71 Identities=45% Similarity=0.689 Sum_probs=67.9
Q ss_pred cchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCCCC
Q 017985 28 TAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGI 98 (363)
Q Consensus 28 ~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~~a~~~f~~i~~AY~vLsd~~~R~~YD~~g~~~~ 98 (363)
.|||++|||+++||.+|||+|||+|+++||||+|++++.+.++|++|++||+||+||.+|..||+||..++
T Consensus 3 ~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yd~~g~~~~ 73 (365)
T PRK14285 3 RDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNKEAESIFKEATEAYEVLIDDNKRAQYDRFGHTAF 73 (365)
T ss_pred CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHcCcchhHHHHhcCcchh
Confidence 69999999999999999999999999999999999888899999999999999999999999999998654
No 17
>PRK14276 chaperone protein DnaJ; Provisional
Probab=99.81 E-value=5.1e-20 Score=184.06 Aligned_cols=71 Identities=51% Similarity=0.808 Sum_probs=66.9
Q ss_pred CcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCCCC
Q 017985 27 DTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGI 98 (363)
Q Consensus 27 ~~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~~a~~~f~~i~~AY~vLsd~~~R~~YD~~g~~~~ 98 (363)
..|||+||||+++||.+|||+|||+|+++||||+|+ ++.+.++|++|++||+||+||.+|+.||+||.+++
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~-~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~~~ 73 (380)
T PRK14276 3 NTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINK-EPGAEEKYKEVQEAYETLSDPQKRAAYDQYGAAGA 73 (380)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CcCHHHHHHHHHHHHHHhcCHhhhhhHhhcCCccc
Confidence 469999999999999999999999999999999998 57789999999999999999999999999998754
No 18
>PRK14297 chaperone protein DnaJ; Provisional
Probab=99.80 E-value=5.9e-20 Score=183.62 Aligned_cols=72 Identities=47% Similarity=0.766 Sum_probs=68.3
Q ss_pred CcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCCCC
Q 017985 27 DTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGI 98 (363)
Q Consensus 27 ~~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~~a~~~f~~i~~AY~vLsd~~~R~~YD~~g~~~~ 98 (363)
..|||++|||+++|+.++||+|||+|+++||||+|++++.|+++|++|++||+||+||.+|+.||+||..++
T Consensus 3 ~~d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~G~~~~ 74 (380)
T PRK14297 3 SKDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNKEAEEKFKEINEAYQVLSDPQKKAQYDQFGTADF 74 (380)
T ss_pred CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcCHhhhCchhhcCcccc
Confidence 369999999999999999999999999999999999878899999999999999999999999999998754
No 19
>PRK14294 chaperone protein DnaJ; Provisional
Probab=99.80 E-value=8.2e-20 Score=181.74 Aligned_cols=73 Identities=52% Similarity=0.845 Sum_probs=68.8
Q ss_pred CcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCCCCC
Q 017985 27 DTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGIP 99 (363)
Q Consensus 27 ~~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~~a~~~f~~i~~AY~vLsd~~~R~~YD~~g~~~~~ 99 (363)
..|||+||||+++||.+|||+|||+||++||||+|++++++.++|+.|++||+||+||.+|+.||+||.+++.
T Consensus 3 ~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~~f~~~~~Ay~vL~d~~~r~~yD~~G~~g~~ 75 (366)
T PRK14294 3 KRDYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDKEAEELFKEAAEAYEVLSDPKKRGIYDQYGHEGLS 75 (366)
T ss_pred CCChHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHhhcccccc
Confidence 4699999999999999999999999999999999987788999999999999999999999999999987643
No 20
>PRK14284 chaperone protein DnaJ; Provisional
Probab=99.80 E-value=1.1e-19 Score=182.20 Aligned_cols=71 Identities=58% Similarity=0.905 Sum_probs=67.6
Q ss_pred cchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCCCC
Q 017985 28 TAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGI 98 (363)
Q Consensus 28 ~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~~a~~~f~~i~~AY~vLsd~~~R~~YD~~g~~~~ 98 (363)
+|||+||||+++||++|||+|||+||++||||+|++++.+.++|+.|++||+||+||.+|+.||+||..+.
T Consensus 1 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~ 71 (391)
T PRK14284 1 MDYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDAQKRESYDRYGKDGP 71 (391)
T ss_pred CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhcCHHHHHHHHhcccccc
Confidence 48999999999999999999999999999999999888899999999999999999999999999998653
No 21
>PRK14301 chaperone protein DnaJ; Provisional
Probab=99.79 E-value=1.6e-19 Score=179.95 Aligned_cols=73 Identities=51% Similarity=0.834 Sum_probs=68.7
Q ss_pred CcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCCCCC
Q 017985 27 DTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGIP 99 (363)
Q Consensus 27 ~~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~~a~~~f~~i~~AY~vLsd~~~R~~YD~~g~~~~~ 99 (363)
..|||++|||+++||.++||+|||+|+++||||+|+++++|+++|++|++||+||+||.+|+.||+||..++.
T Consensus 3 ~~~~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~g~~g~~ 75 (373)
T PRK14301 3 QRDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPEAEQKFKEAAEAYEVLRDAEKRARYDRFGHAGVN 75 (373)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHhCCCcCCCChHHHHHHHHHHHHHHHhcchhhhhhhhhccccccc
Confidence 3699999999999999999999999999999999998888999999999999999999999999999987643
No 22
>PRK14299 chaperone protein DnaJ; Provisional
Probab=99.79 E-value=2.6e-19 Score=173.01 Aligned_cols=70 Identities=50% Similarity=0.750 Sum_probs=66.1
Q ss_pred CcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCCC
Q 017985 27 DTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEG 97 (363)
Q Consensus 27 ~~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~~a~~~f~~i~~AY~vLsd~~~R~~YD~~g~~~ 97 (363)
..|||++|||+++||.+|||+|||+|+++||||+|+ ++.+.++|+.|++||++|+||.+|+.||+||..+
T Consensus 3 ~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~-~~~~~~~f~~i~~Ay~~L~d~~kr~~yD~~g~~~ 72 (291)
T PRK14299 3 YKDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNK-SPGAEEKFKEINEAYTVLSDPEKRRIYDTYGTTA 72 (291)
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-ChhHHHHHHHHHHHHHHhcCHHHHHHHHhcCCcc
Confidence 369999999999999999999999999999999997 5778999999999999999999999999999863
No 23
>PRK14279 chaperone protein DnaJ; Provisional
Probab=99.79 E-value=1.3e-19 Score=181.77 Aligned_cols=69 Identities=52% Similarity=0.846 Sum_probs=66.5
Q ss_pred CcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCC
Q 017985 27 DTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGK 95 (363)
Q Consensus 27 ~~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~~a~~~f~~i~~AY~vLsd~~~R~~YD~~g~ 95 (363)
+.|||++|||+++|+.+|||+|||+||++||||+|++++.|.++|++|++||+|||||++|+.||+||.
T Consensus 8 ~~Dyy~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vLsD~~KR~~YD~~G~ 76 (392)
T PRK14279 8 EKDFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPAAEERFKAVSEAHDVLSDPAKRKEYDETRR 76 (392)
T ss_pred ccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhcchhhhhHHHHhhh
Confidence 479999999999999999999999999999999999888899999999999999999999999999985
No 24
>PRK14280 chaperone protein DnaJ; Provisional
Probab=99.79 E-value=2.2e-19 Score=179.20 Aligned_cols=70 Identities=47% Similarity=0.740 Sum_probs=66.3
Q ss_pred cchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCCCC
Q 017985 28 TAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGI 98 (363)
Q Consensus 28 ~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~~a~~~f~~i~~AY~vLsd~~~R~~YD~~g~~~~ 98 (363)
.|||++|||+++|+.++||+|||+|+++||||+|+ ++.+.++|++|++||+||+||.+|+.||+||.++.
T Consensus 4 ~~~y~iLgv~~~a~~~eik~ayr~la~~~HpD~~~-~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~~ 73 (376)
T PRK14280 4 RDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINK-EEGADEKFKEISEAYEVLSDDQKRAQYDQFGHAGP 73 (376)
T ss_pred CChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHHHhccHhHHHHHHhcCcccc
Confidence 69999999999999999999999999999999997 46789999999999999999999999999998754
No 25
>PHA03102 Small T antigen; Reviewed
Probab=99.79 E-value=1.9e-19 Score=157.43 Aligned_cols=97 Identities=20% Similarity=0.268 Sum_probs=86.5
Q ss_pred cchhhhcCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCCCCCCCCccc
Q 017985 28 TAYYDVLGVNVDA--SPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGIPQDSMVD 105 (363)
Q Consensus 28 ~~~Y~iLgv~~~a--s~~eIkkaYr~la~~~HPDk~~~~~~a~~~f~~i~~AY~vLsd~~~R~~YD~~g~~~~~~~~~~d 105 (363)
..+|++|||+++| |..+||+|||++++++|||++++ .++|+.|++||++|+|+..|..||.+|.+...... ..
T Consensus 5 ~~l~~vLGl~~~A~~s~~eIKkAYr~la~~~HPDkgg~----~e~~k~in~Ay~~L~d~~~r~~yd~~g~~~~~~~~-~~ 79 (153)
T PHA03102 5 KELMDLLGLPRSAWGNLPLMRKAYLRKCLEFHPDKGGD----EEKMKELNTLYKKFRESVKSLRDLDGEEDSSSEEE-DV 79 (153)
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCch----hHHHHHHHHHHHHHhhHHHhccccccCCccccccc-cc
Confidence 3689999999999 99999999999999999999863 46899999999999999999999999988755443 34
Q ss_pred hhhhhhhccccchHHHHHhHHHHH
Q 017985 106 AAAVFGMIFGSEYFEDYIGQLALA 129 (363)
Q Consensus 106 ~~~~f~~~fg~~~f~~~~G~~~~~ 129 (363)
|.++|+++||++.|.+|+|.+-..
T Consensus 80 ~~~~f~~~fg~~~~~~~~~~~~~c 103 (153)
T PHA03102 80 PSGYVGATFGDRVNALYCKDWDTC 103 (153)
T ss_pred HHHHhhhhcCCcchhhHhcchHHH
Confidence 999999999999999999986554
No 26
>PRK14278 chaperone protein DnaJ; Provisional
Probab=99.79 E-value=1.9e-19 Score=179.77 Aligned_cols=68 Identities=51% Similarity=0.781 Sum_probs=65.3
Q ss_pred cchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCC
Q 017985 28 TAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKE 96 (363)
Q Consensus 28 ~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~~a~~~f~~i~~AY~vLsd~~~R~~YD~~g~~ 96 (363)
.|||+||||+++||.+|||+|||+||++||||+|+ +++|.++|+.|++||+||+||.+|+.||+||..
T Consensus 3 ~d~y~iLgv~~~a~~~eik~ayr~la~~~hpD~~~-~~~a~~~f~~i~~Ay~vL~d~~~r~~YD~~G~~ 70 (378)
T PRK14278 3 RDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNP-DEEAQEKFKEISVAYEVLSDPEKRRIVDLGGDP 70 (378)
T ss_pred CCcceecCCCCCCCHHHHHHHHHHHHHHHCCCCCC-cHHHHHHHHHHHHHHHHhchhhhhhhhhccCCc
Confidence 58999999999999999999999999999999998 678999999999999999999999999999975
No 27
>PRK10767 chaperone protein DnaJ; Provisional
Probab=99.79 E-value=2.8e-19 Score=178.29 Aligned_cols=73 Identities=52% Similarity=0.834 Sum_probs=68.6
Q ss_pred CcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCCCCC
Q 017985 27 DTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGIP 99 (363)
Q Consensus 27 ~~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~~a~~~f~~i~~AY~vLsd~~~R~~YD~~g~~~~~ 99 (363)
..|||++|||+++||.+|||+|||+||++||||+|++++.|.++|++|++||++|+||.+|..||+||..++.
T Consensus 3 ~~d~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~ 75 (371)
T PRK10767 3 KRDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAFE 75 (371)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCcHHHHHHHHHHHHHHHHhcchhhhhHhhhccccccc
Confidence 4699999999999999999999999999999999987788999999999999999999999999999986643
No 28
>PRK14295 chaperone protein DnaJ; Provisional
Probab=99.78 E-value=3.2e-19 Score=178.73 Aligned_cols=72 Identities=54% Similarity=0.840 Sum_probs=68.2
Q ss_pred CcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhh----cCCCCC
Q 017985 27 DTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDK----HGKEGI 98 (363)
Q Consensus 27 ~~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~~a~~~f~~i~~AY~vLsd~~~R~~YD~----~g~~~~ 98 (363)
..|||+||||+++||.+|||+|||+|+++||||+|++++.++++|++|++||+||+||.+|+.||+ ||..++
T Consensus 8 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~~~~~G~~g~ 83 (389)
T PRK14295 8 EKDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAKAEERFKEISEAYDVLSDEKKRKEYDEARSLFGNGGF 83 (389)
T ss_pred ccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchhHHHHHHHHHHHHHHHCchhhHHHHHHHHhhhccccc
Confidence 579999999999999999999999999999999998778899999999999999999999999999 997654
No 29
>KOG0718 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.78 E-value=7.2e-19 Score=173.84 Aligned_cols=106 Identities=37% Similarity=0.649 Sum_probs=85.8
Q ss_pred CCcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh---HHHHHHHHHHHHHHHcCChhHHHHHhhcCCCCCCCCC
Q 017985 26 KDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDP---KAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGIPQDS 102 (363)
Q Consensus 26 ~~~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~---~a~~~f~~i~~AY~vLsd~~~R~~YD~~g~~~~~~~~ 102 (363)
.+.+||.+|+|+++||.+||++|||++++.|||||..+.. .|++.|+.|.+||+|||||++|.+||.||..|+...+
T Consensus 7 ~e~e~Ya~LNlpkdAt~eeI~~AYrr~~~lfHPDkh~dpd~K~~AE~~F~~i~~AyEVLsDp~kRaIYD~~G~qGL~t~g 86 (546)
T KOG0718|consen 7 DEIELYALLNLPKDATDEEIKKAYRRLSRLFHPDKHTDPDQKKAAEEKFQRIQRAYEVLSDPQKRAIYDNYGEQGLKTEG 86 (546)
T ss_pred chhhHHHHhCCCcccCHHHHHHHHHHHHHhcCCcccCChhHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhhccccccC
Confidence 3458999999999999999999999999999999987321 3889999999999999999999999999999876321
Q ss_pred ccchhhhhhhccccchHHHHHhHHHHHHhhhhhhhhccccHHHHhHHHHHHHHHHHHHHHHHHH
Q 017985 103 MVDAAAVFGMIFGSEYFEDYIGQLALATMASVEVEEDKQDIEVYKHKIQEKMRAMQKEREEKLI 166 (363)
Q Consensus 103 ~~d~~~~f~~~fg~~~f~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~R~~~la 166 (363)
|...|. ..+++ +++++.+++|++|+...-
T Consensus 87 -------wEl~~r------------------------~~tpe----EIreE~Erl~r~~de~~l 115 (546)
T KOG0718|consen 87 -------WELGFR------------------------GKTPE----EIREEYERLQRERDERRL 115 (546)
T ss_pred -------ceeecC------------------------CCCHH----HHHHHHHHHHHHHHHHHH
Confidence 222221 12333 678889999999988753
No 30
>PRK14283 chaperone protein DnaJ; Provisional
Probab=99.78 E-value=2.9e-19 Score=178.53 Aligned_cols=74 Identities=47% Similarity=0.766 Sum_probs=69.2
Q ss_pred ccCCcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCCCC
Q 017985 24 MVKDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGI 98 (363)
Q Consensus 24 ~~~~~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~~a~~~f~~i~~AY~vLsd~~~R~~YD~~g~~~~ 98 (363)
|+.+.|||++|||+++||.+|||+|||+||++||||+|+ ++.|.++|++|++||+||+||.+|+.||+||.+++
T Consensus 1 ~~~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~-~~~a~~~f~~i~~Ay~~Lsd~~kR~~YD~~G~~g~ 74 (378)
T PRK14283 1 MAEKRDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSE-EEGAEEKFKEISEAYAVLSDDEKRQRYDQFGHAGM 74 (378)
T ss_pred CCCcCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHHHhchhHHHHHHhhhccccc
Confidence 456789999999999999999999999999999999998 47899999999999999999999999999998754
No 31
>KOG0716 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.77 E-value=2.5e-19 Score=167.19 Aligned_cols=74 Identities=46% Similarity=0.714 Sum_probs=69.9
Q ss_pred cCCcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCCCC
Q 017985 25 VKDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGI 98 (363)
Q Consensus 25 ~~~~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~~a~~~f~~i~~AY~vLsd~~~R~~YD~~g~~~~ 98 (363)
+...++|+|||++++|+.++|||+||+|+++||||+++++|++.++|++||+||+||+||.+|..||++|..++
T Consensus 28 ~~~~~LYdVLgl~k~at~d~IKKaYR~L~~k~HPD~~gd~P~~~dkf~eIN~Ay~ILsD~~kR~~YD~~g~~~l 101 (279)
T KOG0716|consen 28 VIRLDLYDVLGLPKTATKDEIKKAYRKLALKYHPDKNGDNPEATDKFKEINTAYAILSDPTKRNVYDEYGELGL 101 (279)
T ss_pred cchhHHHHHhCCCcccchHHHHHHHHHHHHHhCCCcCCCCchhHHHHHHHHHHHHHhcChhhhhhHHHhhhHHH
Confidence 34778999999999999999999999999999999999999999999999999999999999999999987654
No 32
>PRK14290 chaperone protein DnaJ; Provisional
Probab=99.77 E-value=5.6e-19 Score=175.73 Aligned_cols=71 Identities=45% Similarity=0.796 Sum_probs=66.8
Q ss_pred cchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh-HHHHHHHHHHHHHHHcCChhHHHHHhhcCCCCC
Q 017985 28 TAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDP-KAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGI 98 (363)
Q Consensus 28 ~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~-~a~~~f~~i~~AY~vLsd~~~R~~YD~~g~~~~ 98 (363)
.|||++|||+++||.+|||+|||+|+++||||++++++ .|.++|+.|++||++|+||.+|..||.||..++
T Consensus 3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~G~~~~ 74 (365)
T PRK14290 3 KDYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQKRRQYDQTGTVDF 74 (365)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHHHHHHHHHHHHHHHhcChhhhhhhcccCCccc
Confidence 59999999999999999999999999999999998665 688999999999999999999999999998654
No 33
>PRK14291 chaperone protein DnaJ; Provisional
Probab=99.77 E-value=4.1e-19 Score=177.62 Aligned_cols=70 Identities=51% Similarity=0.838 Sum_probs=66.2
Q ss_pred cchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCCCC
Q 017985 28 TAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGI 98 (363)
Q Consensus 28 ~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~~a~~~f~~i~~AY~vLsd~~~R~~YD~~g~~~~ 98 (363)
.|||++|||+++|+.++||+|||+|+++||||+|++ +.+.++|+.|++||+||+||.+|+.||+||..++
T Consensus 3 ~d~Y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~-~~~~~~f~~i~~Ay~vLsd~~kR~~YD~~g~~~~ 72 (382)
T PRK14291 3 KDYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKN-PEAEEKFKEINEAYQVLSDPEKRKLYDQFGHAAF 72 (382)
T ss_pred CCHHHhhCCCCCCCHHHHHHHHHHHHHHHCCCCCCC-ccHHHHHHHHHHHHHHhcCHHHHHHHhhhccccc
Confidence 699999999999999999999999999999999984 7788999999999999999999999999998654
No 34
>PRK14281 chaperone protein DnaJ; Provisional
Probab=99.76 E-value=8.1e-19 Score=176.30 Aligned_cols=71 Identities=48% Similarity=0.793 Sum_probs=67.7
Q ss_pred cchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCCCC
Q 017985 28 TAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGI 98 (363)
Q Consensus 28 ~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~~a~~~f~~i~~AY~vLsd~~~R~~YD~~g~~~~ 98 (363)
.|||+||||+++|+.++||+|||+|+++||||+|++++.|.++|++|++||++|+||.+|+.||+||..++
T Consensus 3 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~g~~~~ 73 (397)
T PRK14281 3 RDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKEAEEHFKEVNEAYEVLSNDDKRRRYDQFGHAGV 73 (397)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhhhhhhhhhhhhccchhh
Confidence 59999999999999999999999999999999998778899999999999999999999999999998654
No 35
>PRK14289 chaperone protein DnaJ; Provisional
Probab=99.76 E-value=1.3e-18 Score=174.41 Aligned_cols=73 Identities=53% Similarity=0.872 Sum_probs=69.0
Q ss_pred CCcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCCCC
Q 017985 26 KDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGI 98 (363)
Q Consensus 26 ~~~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~~a~~~f~~i~~AY~vLsd~~~R~~YD~~g~~~~ 98 (363)
...|||++|||+++||.+|||+|||+|+++||||+|++++++.++|+.|++||++|+||.+|+.||+||..+.
T Consensus 3 ~~~~~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~G~~~~ 75 (386)
T PRK14289 3 EKRDYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDKEAEEKFKEAAEAYDVLSDPDKRSRYDQFGHAGV 75 (386)
T ss_pred ccCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHhccccc
Confidence 3579999999999999999999999999999999999888899999999999999999999999999998654
No 36
>TIGR02349 DnaJ_bact chaperone protein DnaJ. This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.
Probab=99.76 E-value=1.3e-18 Score=172.46 Aligned_cols=70 Identities=53% Similarity=0.873 Sum_probs=65.8
Q ss_pred chhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCCCCC
Q 017985 29 AYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGIP 99 (363)
Q Consensus 29 ~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~~a~~~f~~i~~AY~vLsd~~~R~~YD~~g~~~~~ 99 (363)
|||++|||+++|+.++||+|||+|+++||||+++ ++.+.++|+.|++||+||+||.+|..||.||..+..
T Consensus 1 d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~-~~~~~~~f~~i~~Ay~vL~d~~~R~~yd~~g~~~~~ 70 (354)
T TIGR02349 1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNK-DKEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFN 70 (354)
T ss_pred ChHHhCCCCCCCCHHHHHHHHHHHHHHHCCCCCC-CccHHHHHHHHHHHHHHhhChHHHHhhhhccccccc
Confidence 6999999999999999999999999999999997 677889999999999999999999999999987543
No 37
>PRK14292 chaperone protein DnaJ; Provisional
Probab=99.75 E-value=1.8e-18 Score=172.45 Aligned_cols=88 Identities=42% Similarity=0.642 Sum_probs=74.6
Q ss_pred cchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCCCCCC-------
Q 017985 28 TAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGIPQ------- 100 (363)
Q Consensus 28 ~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~~a~~~f~~i~~AY~vLsd~~~R~~YD~~g~~~~~~------- 100 (363)
.|||++|||+++||.++||+|||+|+++||||+++ ++.+.++|+.|++||+||+||.+|+.||+||..+...
T Consensus 2 ~d~y~~Lgv~~~a~~~~ik~ayr~l~~~~hpD~~~-~~~a~~~~~~i~~Ay~vL~d~~~r~~yd~~G~~~~~~~~~~~~~ 80 (371)
T PRK14292 2 MDYYELLGVSRTASADEIKSAYRKLALKYHPDRNK-EKGAAEKFAQINEAYAVLSDAEKRAHYDRFGTAPGAGMPGGDPF 80 (371)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCC-ChhHHHHHHHHHHHHHHhcchhhhhhHhhcCCcccccccCCccc
Confidence 48999999999999999999999999999999997 5778999999999999999999999999999864211
Q ss_pred CC-ccchhhhhhhcccc
Q 017985 101 DS-MVDAAAVFGMIFGS 116 (363)
Q Consensus 101 ~~-~~d~~~~f~~~fg~ 116 (363)
.+ ..|+.++|..+||+
T Consensus 81 ~~~~~d~~d~f~~~fg~ 97 (371)
T PRK14292 81 GGMGFDPMDIFEQLFGG 97 (371)
T ss_pred CccCCChHHHHHHhhCC
Confidence 00 12455677777764
No 38
>PRK14300 chaperone protein DnaJ; Provisional
Probab=99.73 E-value=5.2e-18 Score=169.17 Aligned_cols=70 Identities=43% Similarity=0.736 Sum_probs=66.0
Q ss_pred cchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCCCC
Q 017985 28 TAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGI 98 (363)
Q Consensus 28 ~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~~a~~~f~~i~~AY~vLsd~~~R~~YD~~g~~~~ 98 (363)
.|||++|||+++||.+|||+|||+++++||||+++ ++.++++|++|++||++|+||.+|..||+||.+++
T Consensus 3 ~~~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~-~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~ 72 (372)
T PRK14300 3 QDYYQILGVSKTASQADLKKAYLKLAKQYHPDTTD-AKDAEKKFKEINAAYDVLKDEQKRAAYDRFGHDAF 72 (372)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CcCHHHHHHHHHHHHHHhhhHhHhhHHHhcccccc
Confidence 59999999999999999999999999999999997 56788999999999999999999999999998654
No 39
>PRK14293 chaperone protein DnaJ; Provisional
Probab=99.73 E-value=7.3e-18 Score=168.23 Aligned_cols=70 Identities=47% Similarity=0.842 Sum_probs=66.1
Q ss_pred cchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCCCC
Q 017985 28 TAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGI 98 (363)
Q Consensus 28 ~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~~a~~~f~~i~~AY~vLsd~~~R~~YD~~g~~~~ 98 (363)
.|||+||||+++||.++||+|||+|+++||||+|+ ++.+.++|+.|++||+||+||.+|+.||.||..++
T Consensus 3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~-~~~a~~~f~~i~~Ay~vL~~~~~R~~yd~~g~~g~ 72 (374)
T PRK14293 3 ADYYEILGVSRDADKDELKRAYRRLARKYHPDVNK-EPGAEDRFKEINRAYEVLSDPETRARYDQFGEAGV 72 (374)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCCCC-CcCHHHHHHHHHHHHHHHhchHHHHHHhhcccccc
Confidence 58999999999999999999999999999999997 46788999999999999999999999999998654
No 40
>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.73 E-value=6.9e-18 Score=162.56 Aligned_cols=87 Identities=41% Similarity=0.597 Sum_probs=76.0
Q ss_pred cchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCCCCCCCCccchh
Q 017985 28 TAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGIPQDSMVDAA 107 (363)
Q Consensus 28 ~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~~a~~~f~~i~~AY~vLsd~~~R~~YD~~g~~~~~~~~~~d~~ 107 (363)
.|||++|||+++|+..|||+||++|+++||||.|.+ ++|.++|++|.+||+||+|+++|..||.+|..+. .....+|.
T Consensus 43 ~d~Y~vLgv~~~At~~EIK~Af~~LaKkyHPD~n~~-~~a~~kF~eI~~AYEiLsd~eKR~~YD~~~~~~~-~~~~g~~~ 120 (288)
T KOG0715|consen 43 EDYYKVLGVSRNATLSEIKSAFRKLAKKYHPDVNKD-KEASKKFKEISEAYEILSDEEKRQEYDVYGLEQH-GEFGGNPF 120 (288)
T ss_pred cchhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCCC-cchhhHHHHHHHHHHHhcCHHHHHHHHHhhhhcc-ccccCCcc
Confidence 399999999999999999999999999999999974 5899999999999999999999999999998751 11223677
Q ss_pred hhhhhcccc
Q 017985 108 AVFGMIFGS 116 (363)
Q Consensus 108 ~~f~~~fg~ 116 (363)
..|..+|++
T Consensus 121 ~~~~~~~~~ 129 (288)
T KOG0715|consen 121 DVFLEFFGG 129 (288)
T ss_pred chHHHhhcc
Confidence 777777776
No 41
>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []. Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Such a structure is shown in the following schematic representation: +------------+-+-------+-----+-----------+--------------------------------+ | N-terminal | | Gly-R | | CXXCXGXG | C-terminal | +------------+-+-------+-----+-----------+--------------------------------+ It is thought that the 'J' domain of DnaJ mediates the interaction with the dnaK protein and consists of four helices, the second of which has a charged surface that includes at least one pair of basic residues that are essential for interaction with the ATPase domain of Hsp70. The J- and CRR-domains are found in many prokaryotic and eukaryotic proteins [], either together or separately. In yeast, J-domains have been classified into 3 groups; the class III proteins are functionally distinct and do not appear to act as molecular chaperones []. ; GO: 0031072 heat shock protein binding; PDB: 2GUZ_C 2L6L_A 1HDJ_A 2EJ7_A 1FPO_C 2CUG_A 2QSA_A 2OCH_A 3BVO_B 3APQ_A ....
Probab=99.72 E-value=9.2e-18 Score=125.88 Aligned_cols=63 Identities=51% Similarity=0.835 Sum_probs=59.9
Q ss_pred chhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh-HHHHHHHHHHHHHHHcCChhHHHHHh
Q 017985 29 AYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDP-KAAKNFQVLGEAYQVLSDPEKREAYD 91 (363)
Q Consensus 29 ~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~-~a~~~f~~i~~AY~vLsd~~~R~~YD 91 (363)
|||+||||+++++.++|+++|+++++.+|||++++++ .+.+.|..|++||++|+||.+|+.||
T Consensus 1 ~~y~iLgl~~~~~~~eik~~y~~l~~~~HPD~~~~~~~~~~~~~~~i~~Ay~~L~~~~~R~~YD 64 (64)
T PF00226_consen 1 NPYEILGLPPDASDEEIKKAYRRLSKQYHPDKNSGDEAEAEEKFARINEAYEILSDPERRRRYD 64 (64)
T ss_dssp HHHHHCTSTTTSSHHHHHHHHHHHHHHTSTTTGTSTHHHHHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred ChHHHCCCCCCCCHHHHHHHHHhhhhccccccchhhhhhhhHHHHHHHHHHHHhCCHHHHHhcC
Confidence 6899999999999999999999999999999998665 58899999999999999999999998
No 42
>KOG0717 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.72 E-value=6.9e-18 Score=166.87 Aligned_cols=69 Identities=49% Similarity=0.788 Sum_probs=64.1
Q ss_pred CcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hHHHHHHHHHHHHHHHcCChhHHHHHhhcCC
Q 017985 27 DTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGD-PKAAKNFQVLGEAYQVLSDPEKREAYDKHGK 95 (363)
Q Consensus 27 ~~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~-~~a~~~f~~i~~AY~vLsd~~~R~~YD~~g~ 95 (363)
.+.||++|||.++|++.+||++||+||++|||||||.. .+|+++|+.|+.||+|||||+.|+.||.+-.
T Consensus 7 ~~c~YE~L~v~~~a~d~eik~~YRklALq~HPDknpd~ieeat~~F~~i~aAYeVLSdp~eR~wyd~hre 76 (508)
T KOG0717|consen 7 KRCYYEVLGVERDADDDEIKKNYRKLALQYHPDKNPDRIEEATQQFQLIQAAYEVLSDPQERAWYDSHRE 76 (508)
T ss_pred hhHHHHHhcccccCCHHHHHHHHHHHHHhhCCCCCCccHHHHHHHHHHHHHHHHHhcChHhhhhHHHHHH
Confidence 46799999999999999999999999999999998865 4599999999999999999999999998754
No 43
>PRK10266 curved DNA-binding protein CbpA; Provisional
Probab=99.71 E-value=1.5e-17 Score=161.77 Aligned_cols=68 Identities=37% Similarity=0.620 Sum_probs=64.1
Q ss_pred cchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCC
Q 017985 28 TAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKE 96 (363)
Q Consensus 28 ~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~~a~~~f~~i~~AY~vLsd~~~R~~YD~~g~~ 96 (363)
.|||++|||+++||.+|||+|||+|+++||||+++ ++.+.++|++|++||++|+||.+|..||.||..
T Consensus 4 ~d~y~~Lgv~~~a~~~eik~ayr~la~k~HPD~~~-~~~~~~~f~~i~~Ay~~L~~~~kr~~yD~~g~~ 71 (306)
T PRK10266 4 KDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSK-EPDAEARFKEVAEAWEVLSDEQRRAEYDQLWQH 71 (306)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHHHhhhHHHHHHHHHhhcc
Confidence 58999999999999999999999999999999987 467899999999999999999999999999853
No 44
>KOG0719 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.69 E-value=3.7e-17 Score=149.50 Aligned_cols=88 Identities=42% Similarity=0.579 Sum_probs=73.3
Q ss_pred cchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCC--CChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCCC-CCCCCcc
Q 017985 28 TAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNP--GDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEG-IPQDSMV 104 (363)
Q Consensus 28 ~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~--~~~~a~~~f~~i~~AY~vLsd~~~R~~YD~~g~~~-~~~~~~~ 104 (363)
+|+|+||||.++|++.+|++|||++++.+|||+++ ...++..+|+.|+.||+||+|.++|+.||.-|.-. .+..-..
T Consensus 14 ~d~YevLGVer~a~~~eIrkAY~klal~~HPDk~~eed~~ea~~kFq~l~k~y~iLsDeekR~~YDetG~idd~~~d~~~ 93 (264)
T KOG0719|consen 14 KDLYEVLGVERDATDKEIRKAYHKLALRLHPDKNHEEDKVEATEKFQQLQKAYQILSDEEKRAVYDETGSIDDESGDIDE 93 (264)
T ss_pred cCHHHHhhhcccCCHHHHHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHhccCCCCCccchhhh
Confidence 48999999999999999999999999999999994 34568999999999999999999999999999744 2222344
Q ss_pred chhhhhhhccc
Q 017985 105 DAAAVFGMIFG 115 (363)
Q Consensus 105 d~~~~f~~~fg 115 (363)
|..++|..+|-
T Consensus 94 ~~~e~~~~iyk 104 (264)
T KOG0719|consen 94 DWLEFWRAIYK 104 (264)
T ss_pred HHHHHHHHHHh
Confidence 55566655553
No 45
>KOG0721 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.65 E-value=2.4e-16 Score=142.91 Aligned_cols=76 Identities=37% Similarity=0.583 Sum_probs=69.3
Q ss_pred CCcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCCCCCCC
Q 017985 26 KDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGIPQD 101 (363)
Q Consensus 26 ~~~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~~a~~~f~~i~~AY~vLsd~~~R~~YD~~g~~~~~~~ 101 (363)
..-|+|+||||+|++|..|||+|||+|+++|||||+|+..+.++.|..|++||+.|+|+..|+.|..||..+.++.
T Consensus 97 ~~fDPyEILGl~pgas~~eIKkaYR~LSik~HPDK~~~~~~~e~~~~~I~KAY~aLTD~~sreN~ekYG~PDGpq~ 172 (230)
T KOG0721|consen 97 QKFDPYEILGLDPGASEKEIKKAYRRLSIKYHPDKQPPEEGDEEFFEAIAKAYQALTDKKSRENWEKYGNPDGPQA 172 (230)
T ss_pred hcCCcHHhhCCCCCCCHHHHHHHHHHhhhhhCCCcCCCcchhHHHHHHHHHHHHHhcchhhHHHHHHhCCCCCccc
Confidence 4568999999999999999999999999999999998655677889999999999999999999999999876654
No 46
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ. This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.
Probab=99.62 E-value=7.9e-16 Score=160.83 Aligned_cols=71 Identities=48% Similarity=0.791 Sum_probs=66.7
Q ss_pred cchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCCCCC
Q 017985 28 TAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGIP 99 (363)
Q Consensus 28 ~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~~a~~~f~~i~~AY~vLsd~~~R~~YD~~g~~~~~ 99 (363)
.|||++|||+++|+..+||++||+|+++||||++++ +.+..+|+.|++||++|+||.+|..||.||..+..
T Consensus 2 ~DYYeVLGVs~dAS~eEIKKAYRKLAKKyHPDKn~~-~eAeekFqeINEAYEVLSDP~KRa~YD~fG~aG~d 72 (871)
T TIGR03835 2 RDYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKA-PDAASIFAEINEANDVLSNPKKRANYDKYGHDGVD 72 (871)
T ss_pred CChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-hhHHHHHHHHHHHHHHhCCHHHHHHHhhhcccccc
Confidence 589999999999999999999999999999999975 77888999999999999999999999999987654
No 47
>smart00271 DnaJ DnaJ molecular chaperone homology domain.
Probab=99.62 E-value=7.8e-16 Score=113.62 Aligned_cols=58 Identities=59% Similarity=0.876 Sum_probs=54.3
Q ss_pred cchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-ChHHHHHHHHHHHHHHHcCChh
Q 017985 28 TAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPG-DPKAAKNFQVLGEAYQVLSDPE 85 (363)
Q Consensus 28 ~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~-~~~a~~~f~~i~~AY~vLsd~~ 85 (363)
+|||++|||+++++.++||++|+++++.+|||++++ .+.+.+.|..|++||++|+||.
T Consensus 1 ~~~y~vLgl~~~~~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~~~~~l~~Ay~~L~~~~ 59 (60)
T smart00271 1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPE 59 (60)
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHHHcCCC
Confidence 489999999999999999999999999999999986 5678899999999999999985
No 48
>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=99.60 E-value=1.5e-15 Score=137.45 Aligned_cols=71 Identities=55% Similarity=0.880 Sum_probs=66.6
Q ss_pred ccCCcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChH-HHHHHHHHHHHHHHcCChhHHHHHhhcC
Q 017985 24 MVKDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPK-AAKNFQVLGEAYQVLSDPEKREAYDKHG 94 (363)
Q Consensus 24 ~~~~~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~~-a~~~f~~i~~AY~vLsd~~~R~~YD~~g 94 (363)
|....+||+||||+++|+..+|+++||+++++||||+++.++. +.+.|+.|++||++|+|+..|..||..+
T Consensus 2 ~~~~~~~y~iLgv~~~as~~eik~ayrkla~~~HPD~~~~~~~~a~~~f~~i~~Ay~vLsd~~~r~~yd~~~ 73 (237)
T COG2214 2 MSDLLDYYEILGVPPNASLEEIKKAYRKLALKYHPDRNPGDPKVAEEKFKEINEAYEILSDPERRAEYDKIG 73 (237)
T ss_pred chhhhhHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhhCHHHHHHhhhhc
Confidence 3456799999999999999999999999999999999998885 9999999999999999999999999974
No 49
>cd06257 DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.
Probab=99.59 E-value=2.7e-15 Score=108.69 Aligned_cols=55 Identities=60% Similarity=0.901 Sum_probs=51.8
Q ss_pred chhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCC
Q 017985 29 AYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSD 83 (363)
Q Consensus 29 ~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~~a~~~f~~i~~AY~vLsd 83 (363)
|||++|||+++++.++||++||++++++|||++++.+.+.+.|+.|++||++|+|
T Consensus 1 ~~y~vLgl~~~~~~~~ik~~y~~l~~~~HPD~~~~~~~~~~~~~~l~~Ay~~L~d 55 (55)
T cd06257 1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPEAEEKFKEINEAYEVLSD 55 (55)
T ss_pred ChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcC
Confidence 6999999999999999999999999999999997556788999999999999987
No 50
>PRK00294 hscB co-chaperone HscB; Provisional
Probab=99.51 E-value=5e-13 Score=119.81 Aligned_cols=67 Identities=27% Similarity=0.414 Sum_probs=60.1
Q ss_pred CCcchhhhcCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCChH-----HHHHHHHHHHHHHHcCChhHHHHHhh
Q 017985 26 KDTAYYDVLGVNVD--ASPAEIKKAYYLKARIVHPDKNPGDPK-----AAKNFQVLGEAYQVLSDPEKREAYDK 92 (363)
Q Consensus 26 ~~~~~Y~iLgv~~~--as~~eIkkaYr~la~~~HPDk~~~~~~-----a~~~f~~i~~AY~vLsd~~~R~~YD~ 92 (363)
..+|||++|||++. .+..+|+++||++++++|||++++.+. +.+.+..||+||++|+||.+|..|+-
T Consensus 2 ~~~~~F~l~~l~~~f~id~~~L~~~Yr~Lq~~~HPDk~~~~~~~e~~~a~~~s~~IN~AY~~L~~p~~Ra~YlL 75 (173)
T PRK00294 2 GTPCHFALFDLQPSFRLDLDQLATRYRELAREVHPDRFADAPEREQRLALERSASLNEAYQTLKSPPRRARYLL 75 (173)
T ss_pred CCCChhhhcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhCChhhhHHHHH
Confidence 46799999999997 568999999999999999999876554 55779999999999999999999985
No 51
>PRK05014 hscB co-chaperone HscB; Provisional
Probab=99.50 E-value=2.9e-13 Score=121.27 Aligned_cols=65 Identities=26% Similarity=0.442 Sum_probs=58.0
Q ss_pred cchhhhcCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCChH-----HHHHHHHHHHHHHHcCChhHHHHHhh
Q 017985 28 TAYYDVLGVNVD--ASPAEIKKAYYLKARIVHPDKNPGDPK-----AAKNFQVLGEAYQVLSDPEKREAYDK 92 (363)
Q Consensus 28 ~~~Y~iLgv~~~--as~~eIkkaYr~la~~~HPDk~~~~~~-----a~~~f~~i~~AY~vLsd~~~R~~YD~ 92 (363)
.|||++|||++. ++..+|+++||++++++|||+.++.+. +.+.|..||+||++|+||.+|..|+-
T Consensus 1 ~~yf~llgl~~~~~~d~~~L~~~yr~l~~~~HPDk~~~~~~~~~~~a~~~s~~iN~AY~~L~dp~~Ra~Yll 72 (171)
T PRK05014 1 MDYFTLFGLPARYDIDTQLLASRYQELQRQFHPDKFANASERERLLAVQQAATINDAYQTLKHPLKRAEYLL 72 (171)
T ss_pred CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHCChhHHHHHHH
Confidence 489999999996 678999999999999999999875543 56789999999999999999999974
No 52
>KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms]
Probab=99.46 E-value=4.4e-14 Score=136.40 Aligned_cols=69 Identities=42% Similarity=0.610 Sum_probs=63.1
Q ss_pred cCCcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChH---HHHHHHHHHHHHHHcCChhHHHHHhhc
Q 017985 25 VKDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPK---AAKNFQVLGEAYQVLSDPEKREAYDKH 93 (363)
Q Consensus 25 ~~~~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~~---a~~~f~~i~~AY~vLsd~~~R~~YD~~ 93 (363)
+..+|||+||||.++|+..||.+|||++|.+||||...+..+ |+++|..|..|-+||+||++|++||..
T Consensus 391 s~kRDYYKILGVkRnAsKqEI~KAYRKlAqkWHPDNFqdEeEKKkAEKKFIDIAAAKEVLsd~EkRrqFDnG 462 (504)
T KOG0624|consen 391 SGKRDYYKILGVKRNASKQEITKAYRKLAQKWHPDNFQDEEEKKKAEKKFIDIAAAKEVLSDPEKRRQFDNG 462 (504)
T ss_pred hccchHHHHhhhcccccHHHHHHHHHHHHHhcCCccccCHHHHHHHHHhhhhHHHHHHhhcCHHHHhhccCC
Confidence 356899999999999999999999999999999998875432 889999999999999999999999974
No 53
>PRK03578 hscB co-chaperone HscB; Provisional
Probab=99.45 E-value=2.9e-13 Score=121.68 Aligned_cols=70 Identities=29% Similarity=0.403 Sum_probs=60.2
Q ss_pred CcchhhhcCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCChHHH-----HHHHHHHHHHHHcCChhHHHHHhh--cCCC
Q 017985 27 DTAYYDVLGVNVD--ASPAEIKKAYYLKARIVHPDKNPGDPKAA-----KNFQVLGEAYQVLSDPEKREAYDK--HGKE 96 (363)
Q Consensus 27 ~~~~Y~iLgv~~~--as~~eIkkaYr~la~~~HPDk~~~~~~a~-----~~f~~i~~AY~vLsd~~~R~~YD~--~g~~ 96 (363)
..|||++|||++. ++..+|+++||++++++|||++++.+.+. +.+..||+||++|+||.+|..|.. .|..
T Consensus 5 ~~dyf~llglp~~f~~d~~~L~~~yr~lq~~~HPD~~~~~~~~e~~~a~~~s~~iN~AY~tL~~p~~Ra~Yll~l~G~~ 83 (176)
T PRK03578 5 KDDHFSLFGLPARFALDEAALDAAYRTVQAQVHPDRFAAAGDAEKRVAMQWATRANEAYQTLRDPLKRARYLLHLRGVD 83 (176)
T ss_pred CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCChhhHHHHHHHhcCCC
Confidence 3699999999995 68899999999999999999998665543 446899999999999999999984 5553
No 54
>PRK01356 hscB co-chaperone HscB; Provisional
Probab=99.45 E-value=1.8e-13 Score=122.05 Aligned_cols=67 Identities=25% Similarity=0.333 Sum_probs=57.8
Q ss_pred cchhhhcCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCChH---HHHHHHHHHHHHHHcCChhHHHHHhhcC
Q 017985 28 TAYYDVLGVNVD--ASPAEIKKAYYLKARIVHPDKNPGDPK---AAKNFQVLGEAYQVLSDPEKREAYDKHG 94 (363)
Q Consensus 28 ~~~Y~iLgv~~~--as~~eIkkaYr~la~~~HPDk~~~~~~---a~~~f~~i~~AY~vLsd~~~R~~YD~~g 94 (363)
.|||++|||++. ++..+|+++||++++++|||++++.++ +...+..|++||++|+||.+|..|+..-
T Consensus 2 ~~yf~llgl~~~f~id~~~L~~aYr~lq~~~HPDk~~~~~~k~~~~~~s~~in~AY~~L~dp~~Ra~YlL~l 73 (166)
T PRK01356 2 QNYFQLLGLPQEYNIDLKILEKQYFAMQVKYHPDKAKTLQEKEQNLIIASELNNAYSTLKDALKRAEYMLLL 73 (166)
T ss_pred CCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHc
Confidence 489999999996 789999999999999999999875332 3345889999999999999999997643
No 55
>KOG0714 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.37 E-value=6.4e-13 Score=125.82 Aligned_cols=72 Identities=49% Similarity=0.793 Sum_probs=64.6
Q ss_pred cchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hHHHHHHHHHHHHHHHcCChhHHHHHhhcCCCCCC
Q 017985 28 TAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGD-PKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGIP 99 (363)
Q Consensus 28 ~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~-~~a~~~f~~i~~AY~vLsd~~~R~~YD~~g~~~~~ 99 (363)
.|||++|||.++|+..+|++||++++++||||+|+.. ..+..+|.+|.+||++|+||.+|..||.+|.++..
T Consensus 3 ~d~~~~l~i~~~as~~~i~ka~~~~a~~~hpdk~~~~~~~~~~~~~~~~ea~~~ls~~~kr~~~d~~~~~~~~ 75 (306)
T KOG0714|consen 3 KDYYKILGIARSASEEDIKKAYRKLALKYHPDKNPSPKEVAEAKFKEIAEAYEVLSDPKKRKIYDQYGEEGLK 75 (306)
T ss_pred ccHHHHhCccccccHHHHHHHHHHHHHhhCCCCCCCchhhHHHHHhhhhccccccCCHHHhhhccccCccccc
Confidence 5899999999999999999999999999999998865 23556899999999999999999999999975444
No 56
>KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.35 E-value=7.7e-13 Score=130.26 Aligned_cols=92 Identities=38% Similarity=0.558 Sum_probs=77.3
Q ss_pred ccccCCcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hHHHHHHHHHHHHHHHcCChhHHHHHhhcCC--CCC
Q 017985 22 KAMVKDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGD-PKAAKNFQVLGEAYQVLSDPEKREAYDKHGK--EGI 98 (363)
Q Consensus 22 ~~~~~~~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~-~~a~~~f~~i~~AY~vLsd~~~R~~YD~~g~--~~~ 98 (363)
..+.+-.|||.||||..+++..+|++|||++++.+|||++.++ .+++.+|+++.+||.||+||.+|..||..-. +..
T Consensus 367 LkkSkRkd~ykilGi~~~as~~eikkayrk~AL~~Hpd~~agsq~eaE~kFkevgeAy~il~d~~kr~r~dsg~dle~~~ 446 (486)
T KOG0550|consen 367 LKKSKRKDWYKILGISRNASDDEIKKAYRKLALVHHPDKNAGSQKEAEAKFKEVGEAYTILSDPMKRVRFDSGQDLEEVG 446 (486)
T ss_pred HHHhhhhhHHHHhhhhhhcccchhhhHHHHHHHHhCCCcCcchhHHHHHHHHHHHHHHHHhcCHHHHhhcccccchhhhc
Confidence 3455678999999999999999999999999999999999887 6799999999999999999999999998543 112
Q ss_pred CCCCccchhhhhhhc
Q 017985 99 PQDSMVDAAAVFGMI 113 (363)
Q Consensus 99 ~~~~~~d~~~~f~~~ 113 (363)
..++.+||...|..+
T Consensus 447 ~~~a~~dp~~~~~a~ 461 (486)
T KOG0550|consen 447 SGGAGFDPFNIFRAF 461 (486)
T ss_pred CCCcCcChhhhhhhc
Confidence 223567887777655
No 57
>KOG0722 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.35 E-value=4.8e-13 Score=123.96 Aligned_cols=70 Identities=43% Similarity=0.624 Sum_probs=64.0
Q ss_pred ccCCcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcC
Q 017985 24 MVKDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHG 94 (363)
Q Consensus 24 ~~~~~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~~a~~~f~~i~~AY~vLsd~~~R~~YD~~g 94 (363)
.|...|+|++|||+++++..+|.+|||+||++||||+++ ++++.+.|..|..||++|.|...|..||-.-
T Consensus 29 YCG~enCYdVLgV~Rea~KseIakAYRqLARrhHPDr~r-~~e~k~~F~~iAtayeilkd~e~rt~ydyal 98 (329)
T KOG0722|consen 29 YCGAENCYDVLGVAREANKSEIAKAYRQLARRHHPDRNR-DPESKKLFVKIATAYEILKDNETRTQYDYAL 98 (329)
T ss_pred cccchhHHHHhhhhhhccHHHHHHHHHHHHHHhCCcccC-CchhhhhhhhhhcccccccchhhHHhHHHHh
Confidence 345568999999999999999999999999999999998 4667799999999999999999999999754
No 58
>KOG0720 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.28 E-value=3.4e-12 Score=126.84 Aligned_cols=68 Identities=43% Similarity=0.610 Sum_probs=64.6
Q ss_pred CcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCC
Q 017985 27 DTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGK 95 (363)
Q Consensus 27 ~~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~~a~~~f~~i~~AY~vLsd~~~R~~YD~~g~ 95 (363)
..|.|.+|||++++++++||+.||++|...|||||. .|.|++.|+.++.||++|+|+++|..||.--.
T Consensus 234 ~~daYsvlGl~~d~sd~~lKk~Yrk~A~LVhPDKn~-~~~A~Eafk~Lq~Afevig~~~kR~eYd~e~~ 301 (490)
T KOG0720|consen 234 ILDAYSALGLPSDCSDADLKKNYRKKAMLVHPDKNM-IPRAEEAFKKLQVAFEVIGDSVKRKEYDLELK 301 (490)
T ss_pred CCCchhhcCCCCCCCHHHHHHHHHhhceEeCCCccC-ChhHHHHHHHHHHHHHHhcchhhhhHHHHHHH
Confidence 679999999999999999999999999999999998 78899999999999999999999999997543
No 59
>PHA02624 large T antigen; Provisional
Probab=99.22 E-value=1.5e-11 Score=127.56 Aligned_cols=84 Identities=23% Similarity=0.326 Sum_probs=66.9
Q ss_pred cchhhhcCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHH--hhcCCCCCCCCCc
Q 017985 28 TAYYDVLGVNVDA--SPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAY--DKHGKEGIPQDSM 103 (363)
Q Consensus 28 ~~~Y~iLgv~~~a--s~~eIkkaYr~la~~~HPDk~~~~~~a~~~f~~i~~AY~vLsd~~~R~~Y--D~~g~~~~~~~~~ 103 (363)
.++|++|||+++| +..+||+|||+++++||||+++ + .++|++|++||++|+|+.+|..| |..-..+++..+.
T Consensus 11 ~elyelLGL~~~A~gs~~eIKkAYRkLAkkyHPDKgG-d---eekfk~Ln~AYevL~d~~k~~r~~fd~~~~~~v~~~~~ 86 (647)
T PHA02624 11 KELMDLLGLPMAAWGNLPLMRKAYLRKCKEYHPDKGG-D---EEKMKRLNSLYKKLQEGVKSARQSFGTQDSSEIPTYGT 86 (647)
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCC-c---HHHHHHHHHHHHHHhcHHHhhhcccccccccCCCCCcc
Confidence 4799999999999 9999999999999999999974 2 57899999999999999999999 4331123444445
Q ss_pred cchhhhhhhccc
Q 017985 104 VDAAAVFGMIFG 115 (363)
Q Consensus 104 ~d~~~~f~~~fg 115 (363)
.+-.++|..+|.
T Consensus 87 ~~w~~ww~~f~~ 98 (647)
T PHA02624 87 PEWEQWWEEFNE 98 (647)
T ss_pred ccHHHHHHHhhh
Confidence 555555655553
No 60
>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]
Probab=99.19 E-value=2.3e-11 Score=120.52 Aligned_cols=73 Identities=33% Similarity=0.607 Sum_probs=66.6
Q ss_pred cchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-----ChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCCCCCC
Q 017985 28 TAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPG-----DPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGIPQ 100 (363)
Q Consensus 28 ~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~-----~~~a~~~f~~i~~AY~vLsd~~~R~~YD~~g~~~~~~ 100 (363)
-|+|+|||++.+++..+||++||+|+.++||||-++ ..+-++.+..|++||..|+|...|+.|-.||..+.|+
T Consensus 98 fDPyEILGI~~~ts~rdik~~yr~Ls~KfhpdK~~~mvn~~rse~Ee~y~~ItkAY~~lTd~k~renyl~yGtPd~pQ 175 (610)
T COG5407 98 FDPYEILGIDQDTSERDIKKRYRMLSMKFHPDKAPPMVNELRSEYEEKYKTITKAYGLLTDKKRRENYLNYGTPDSPQ 175 (610)
T ss_pred CChHHhhcccCCCcHHHHHHHHHhheeecChhhcCCCChhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhcCCCCCCc
Confidence 489999999999999999999999999999999875 1346789999999999999999999999999987664
No 61
>PTZ00100 DnaJ chaperone protein; Provisional
Probab=99.19 E-value=2.5e-11 Score=101.39 Aligned_cols=59 Identities=24% Similarity=0.263 Sum_probs=50.0
Q ss_pred cccccccCCcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcC
Q 017985 19 GEKKAMVKDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLS 82 (363)
Q Consensus 19 ~~~~~~~~~~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~~a~~~f~~i~~AY~vLs 82 (363)
+.+..|. ..++|++|||++++|.+||+++||++++++|||+++ + .+.|++|++||++|.
T Consensus 57 ~f~~~Ms-~~eAy~ILGv~~~As~~eIkkaYRrLa~~~HPDkgG-s---~~~~~kIneAyevL~ 115 (116)
T PTZ00100 57 GFENPMS-KSEAYKILNISPTASKERIREAHKQLMLRNHPDNGG-S---TYIASKVNEAKDLLL 115 (116)
T ss_pred cccCCCC-HHHHHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCC-C---HHHHHHHHHHHHHHh
Confidence 3444443 469999999999999999999999999999999863 3 467899999999985
No 62
>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional
Probab=99.16 E-value=3.6e-11 Score=115.02 Aligned_cols=58 Identities=31% Similarity=0.362 Sum_probs=51.3
Q ss_pred CCcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--C-----hHHHHHHHHHHHHHHHcCC
Q 017985 26 KDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPG--D-----PKAAKNFQVLGEAYQVLSD 83 (363)
Q Consensus 26 ~~~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~--~-----~~a~~~f~~i~~AY~vLsd 83 (363)
...++|++|||++++|.++||++||+|+++||||++.+ . +.++++|++|++||++|+.
T Consensus 198 ~~~~ay~vLgv~~~as~~eIk~aYr~L~~~~HPDk~~~~g~~~~~~~~a~ek~~~I~~AYe~L~~ 262 (267)
T PRK09430 198 TLEDAYKVLGVSESDDDQEIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKEKAQEIQAAYELIKK 262 (267)
T ss_pred cHHhHHHHcCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHH
Confidence 34699999999999999999999999999999999743 1 2478999999999999974
No 63
>PRK01773 hscB co-chaperone HscB; Provisional
Probab=99.10 E-value=2.1e-10 Score=102.92 Aligned_cols=65 Identities=22% Similarity=0.314 Sum_probs=57.3
Q ss_pred cchhhhcCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCChH-----HHHHHHHHHHHHHHcCChhHHHHHhh
Q 017985 28 TAYYDVLGVNVD--ASPAEIKKAYYLKARIVHPDKNPGDPK-----AAKNFQVLGEAYQVLSDPEKREAYDK 92 (363)
Q Consensus 28 ~~~Y~iLgv~~~--as~~eIkkaYr~la~~~HPDk~~~~~~-----a~~~f~~i~~AY~vLsd~~~R~~YD~ 92 (363)
.|||++||+++. .+...++++|+++.+++|||+..+.+. +.+.-..||+||++|+||.+|+.|=-
T Consensus 2 ~nyF~lf~lp~~F~iD~~~L~~~y~~Lq~~~HPD~f~~~~~~eq~~a~~~ss~iN~AY~tLkdPl~RA~YLL 73 (173)
T PRK01773 2 NNPFALFDLPVDFQLDNALLSERYLALQKSLHPDNFANSSAQEQRLAMQKSAEVNDALQILKDPILRAEAII 73 (173)
T ss_pred CChHHhcCCCCCCCCCHHHHHHHHHHHHHHhCcCcccCCCHHHHHHHHHHHHHHHHHHHHHCChHHHHHHHH
Confidence 489999999996 799999999999999999999876543 44567899999999999999999943
No 64
>KOG1150 consensus Predicted molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.95 E-value=1.2e-09 Score=98.28 Aligned_cols=65 Identities=32% Similarity=0.590 Sum_probs=59.3
Q ss_pred CcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hHHHHHHHHHHHHHHHcCChhHHHHHh
Q 017985 27 DTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGD-PKAAKNFQVLGEAYQVLSDPEKREAYD 91 (363)
Q Consensus 27 ~~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~-~~a~~~f~~i~~AY~vLsd~~~R~~YD 91 (363)
+.|+|++|.|.|..+.++||+.||+|++..||||||++ +.|...|..|.+||..|-|+..|..-+
T Consensus 52 nLNpfeVLqIdpev~~edikkryRklSilVHPDKN~Dd~~rAqkAFdivkKA~k~l~n~~~rkr~~ 117 (250)
T KOG1150|consen 52 NLNPFEVLQIDPEVTDEDIKKRYRKLSILVHPDKNPDDAERAQKAFDIVKKAYKLLENDKIRKRCL 117 (250)
T ss_pred ccChHHHHhcCCCCCHHHHHHHHHhhheeecCCCCcccHHHHHHHHHHHHHHHHHHhCHHHHHHHH
Confidence 46899999999999999999999999999999999988 568899999999999999998665543
No 65
>TIGR00714 hscB Fe-S protein assembly co-chaperone HscB. This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock.
Probab=98.90 E-value=3e-09 Score=94.13 Aligned_cols=55 Identities=29% Similarity=0.341 Sum_probs=47.6
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCCCChH-----HHHHHHHHHHHHHHcCChhHHHHHhhcC
Q 017985 40 ASPAEIKKAYYLKARIVHPDKNPGDPK-----AAKNFQVLGEAYQVLSDPEKREAYDKHG 94 (363)
Q Consensus 40 as~~eIkkaYr~la~~~HPDk~~~~~~-----a~~~f~~i~~AY~vLsd~~~R~~YD~~g 94 (363)
.+..+|+++||++++++|||+.++.+. +...+..||+||++|+||.+|..|+-.-
T Consensus 3 iD~~~L~~~yr~lq~~~HPD~~~~~~~~~~~~a~~~s~~iN~AY~~L~~p~~Ra~ylL~l 62 (157)
T TIGR00714 3 LDTQALSLRYQDLQRQYHPDKFASGSAQEQLAAVQQSTTLNQAYQTLKDPLMRAEYMLSL 62 (157)
T ss_pred CCHHHHHHHHHHHHHHHCcCCCCCCChhhhHHHHHHHHHHHHHHHHhCChhhhHHHHHHh
Confidence 477899999999999999999764432 5678999999999999999999998643
No 66
>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]
Probab=98.89 E-value=2.6e-09 Score=100.20 Aligned_cols=86 Identities=29% Similarity=0.462 Sum_probs=70.4
Q ss_pred cCCcchhhhcCCCC---CCCHHHHHHHHHHHHHHhCCCCCC--CChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCC-CC
Q 017985 25 VKDTAYYDVLGVNV---DASPAEIKKAYYLKARIVHPDKNP--GDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKE-GI 98 (363)
Q Consensus 25 ~~~~~~Y~iLgv~~---~as~~eIkkaYr~la~~~HPDk~~--~~~~a~~~f~~i~~AY~vLsd~~~R~~YD~~g~~-~~ 98 (363)
++..|+|.+||++. .+++.+|.++.++.+.+||||+.. ++......|..|+.||+||+|+.+|.+||..-.. .+
T Consensus 40 Wk~~DlYa~lgLskyR~ka~~~qi~kah~kkv~kyHPDk~aa~g~~~~d~fFk~iqkA~evL~D~~~R~qyDS~df~adv 119 (379)
T COG5269 40 WKKVDLYALLGLSKYRTKAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEFFKLIQKAREVLGDRKLRLQYDSNDFDADV 119 (379)
T ss_pred hhhhhHHHHhchHhhhcCCCcHHHHHHHHHHHHHhCccchhccCCCCcHHHHHHHHHHHHHhccHHHHhhccccccccCC
Confidence 35579999999986 689999999999999999999972 3445778899999999999999999999987653 35
Q ss_pred CCCCccchhhhh
Q 017985 99 PQDSMVDAAAVF 110 (363)
Q Consensus 99 ~~~~~~d~~~~f 110 (363)
+......|.+||
T Consensus 120 ppp~~~t~~~Ff 131 (379)
T COG5269 120 PPPRIYTPDEFF 131 (379)
T ss_pred CCccCCCchhHH
Confidence 555555555555
No 67
>KOG1789 consensus Endocytosis protein RME-8, contains DnaJ domain [Intracellular trafficking, secretion, and vesicular transport; Posttranslational modification, protein turnover, chaperones]
Probab=98.20 E-value=1.7e-06 Score=93.42 Aligned_cols=54 Identities=35% Similarity=0.637 Sum_probs=46.8
Q ss_pred CCcchhhhcCCCC----CCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcC
Q 017985 26 KDTAYYDVLGVNV----DASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLS 82 (363)
Q Consensus 26 ~~~~~Y~iLgv~~----~as~~eIkkaYr~la~~~HPDk~~~~~~a~~~f~~i~~AY~vLs 82 (363)
...+-|+||.|+- ...++.||++|++||.+||||||| +..++|.++++||+.|+
T Consensus 1279 S~d~A~eiL~i~l~n~~hD~~~KirrqY~kLA~kYHPDKNP---EGRemFe~VnKAYE~L~ 1336 (2235)
T KOG1789|consen 1279 SVDLAREILSVDLTNEEHDKPAKIRRQYYKLAAKYHPDKNP---EGREMFERVNKAYELLS 1336 (2235)
T ss_pred chHHHHHHhccccCCCCcccHHHHHHHHHHHHHHhCCCCCc---hHHHHHHHHHHHHHHHH
Confidence 4457899999974 345688999999999999999997 47789999999999998
No 68
>KOG0568 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.13 E-value=2.6e-06 Score=78.61 Aligned_cols=57 Identities=30% Similarity=0.490 Sum_probs=50.0
Q ss_pred CcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHH-HcCCh
Q 017985 27 DTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQ-VLSDP 84 (363)
Q Consensus 27 ~~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~~a~~~f~~i~~AY~-vLsd~ 84 (363)
-+.||.+|||..+|+.++++.+|..|++++|||...+ ....+.|++|.+||. ||+..
T Consensus 46 ~~e~fril~v~e~~~adevr~af~~lakq~hpdsgs~-~adaa~f~qideafrkvlq~~ 103 (342)
T KOG0568|consen 46 IMECFRILGVEEGADADEVREAFHDLAKQVHPDSGSE-EADAARFIQIDEAFRKVLQEK 103 (342)
T ss_pred HHHHHHHhcccccCchhHHHHHHHHHHHHcCCCCCCc-cccHHHHHHHHHHHHHHHHHH
Confidence 3689999999999999999999999999999998863 445678999999999 77643
No 69
>KOG3192 consensus Mitochondrial J-type chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=97.66 E-value=9.9e-05 Score=64.47 Aligned_cols=86 Identities=26% Similarity=0.470 Sum_probs=64.9
Q ss_pred cccCCcchhhhcCCCC--CCCHHHHHHHHHHHHHHhCCCCCCC----Ch-HHHHHHHHHHHHHHHcCChhHHHHHh--hc
Q 017985 23 AMVKDTAYYDVLGVNV--DASPAEIKKAYYLKARIVHPDKNPG----DP-KAAKNFQVLGEAYQVLSDPEKREAYD--KH 93 (363)
Q Consensus 23 ~~~~~~~~Y~iLgv~~--~as~~eIkkaYr~la~~~HPDk~~~----~~-~a~~~f~~i~~AY~vLsd~~~R~~YD--~~ 93 (363)
||....+||.++|..+ ...+..+.--|.-...++|||+... ++ .|.+....+++||.+|.||-.|+.|= ..
T Consensus 3 ~~~~~~~ff~~Fg~e~~~~~~p~~l~~~~~~~skkL~~d~~~~~~~~~~d~a~eqSa~lnkAY~TLk~pL~RA~Yilkl~ 82 (168)
T KOG3192|consen 3 KMGSPSRFFDIFGMELSFKIDPDKLKEKYTDISKKLHPDRPGLSFAGDTDQASEQSAELNKAYDTLKDPLARARYLLKLK 82 (168)
T ss_pred ccchHHHHHHHhccccCCCCCcchhhHHHHHHHHhhCcccccccccccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 4556778999998654 5567777778999999999998431 12 37788999999999999999999994 56
Q ss_pred CCCCCCCCCccchhh
Q 017985 94 GKEGIPQDSMVDAAA 108 (363)
Q Consensus 94 g~~~~~~~~~~d~~~ 108 (363)
|.+.+.+....||..
T Consensus 83 g~e~~sne~stDpe~ 97 (168)
T KOG3192|consen 83 GQEQTSNELSTDPEF 97 (168)
T ss_pred CCCCchhhhccCHHH
Confidence 765554444446653
No 70
>KOG0723 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=97.49 E-value=0.00019 Score=58.79 Aligned_cols=62 Identities=24% Similarity=0.241 Sum_probs=48.0
Q ss_pred ccccccccCCcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCCh
Q 017985 18 SGEKKAMVKDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDP 84 (363)
Q Consensus 18 ~~~~~~~~~~~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~~a~~~f~~i~~AY~vLsd~ 84 (363)
.+++.+| ..+.---||||+|+++.+.||.|+|++....|||+.. +|- .-.+||||+++|...
T Consensus 47 GGF~~kM-sr~EA~lIL~v~~s~~k~KikeaHrriM~~NHPD~GG-SPY---lAsKINEAKdlLe~~ 108 (112)
T KOG0723|consen 47 GGFEPKM-SRREAALILGVTPSLDKDKIKEAHRRIMLANHPDRGG-SPY---LASKINEAKDLLEGT 108 (112)
T ss_pred ccccccc-chHHHHHHhCCCccccHHHHHHHHHHHHHcCCCcCCC-CHH---HHHHHHHHHHHHhcc
Confidence 3444333 3344567999999999999999999999999999986 452 235799999999753
No 71
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=96.03 E-value=0.0028 Score=56.95 Aligned_cols=54 Identities=37% Similarity=0.484 Sum_probs=46.0
Q ss_pred cchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCC--CCh-----HHHHHHHHHHHHHHHc
Q 017985 28 TAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNP--GDP-----KAAKNFQVLGEAYQVL 81 (363)
Q Consensus 28 ~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~--~~~-----~a~~~f~~i~~AY~vL 81 (363)
.+.|.+|||++.++..+|+++|+++...+|||+-. +.+ .+.++++.|++||+.+
T Consensus 113 ~~~l~~l~~~~~~~~~~i~~~~r~l~~e~~~d~a~~~~~~~e~~~~~~~~~~~i~~a~~~~ 173 (174)
T COG1076 113 EDALKVLGVEIKADQDAIKKAYRKLLSEQHPDKAAAKGLKLEFIEKLKEKLQEIQEAYEDI 173 (174)
T ss_pred hhHHHHhcCchhhhHHHHHHHHHHHHHhcCHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhc
Confidence 67899999999999999999999999999999842 222 2778899999999753
No 72
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=96.02 E-value=0.0052 Score=55.22 Aligned_cols=67 Identities=24% Similarity=0.259 Sum_probs=53.1
Q ss_pred chhhhcCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCChH-----HHHHHHHHHHHHHHcCChhHHHHHhhcCC
Q 017985 29 AYYDVLGVNVDA--SPAEIKKAYYLKARIVHPDKNPGDPK-----AAKNFQVLGEAYQVLSDPEKREAYDKHGK 95 (363)
Q Consensus 29 ~~Y~iLgv~~~a--s~~eIkkaYr~la~~~HPDk~~~~~~-----a~~~f~~i~~AY~vLsd~~~R~~YD~~g~ 95 (363)
+|+..+|.++.+ ..+.++..|+.+.+.+|||+....+. +...+..++.||.+|.||-.|..|=.--.
T Consensus 2 ~~~~~~~~~~~f~~~~~~l~~~~~~~~~~~~~dr~~~~~~~~~~~~l~~~~~~~~a~~tLk~~l~ra~~~lal~ 75 (174)
T COG1076 2 DGFVLFGLPRAFQIDLDALKLQYRELQRAYHPDRFGKASEAEQRKALQQSAEVNPAYQTLKDPLLRAEYLLALA 75 (174)
T ss_pred CcccccccHHHHHHHHhHhhhhHHHHHHhhCcccccccchHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHhc
Confidence 466667777655 44568999999999999999875544 33578999999999999999999976443
No 73
>KOG0431 consensus Auxilin-like protein and related proteins containing DnaJ domain [General function prediction only]
Probab=94.88 E-value=0.03 Score=57.73 Aligned_cols=26 Identities=42% Similarity=0.548 Sum_probs=23.3
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCC
Q 017985 39 DASPAEIKKAYYLKARIVHPDKNPGD 64 (363)
Q Consensus 39 ~as~~eIkkaYr~la~~~HPDk~~~~ 64 (363)
=.++++||++|||.++..||||.+..
T Consensus 399 LVtp~~VKKaYrKA~L~VHPDKlqq~ 424 (453)
T KOG0431|consen 399 LVTPAQVKKAYRKAVLCVHPDKLQQK 424 (453)
T ss_pred ccCHHHHHHHHHhhhheeCcccccCC
Confidence 35899999999999999999998765
No 74
>PF03656 Pam16: Pam16; InterPro: IPR005341 The Pam16 protein is the fifth essential subunit of the pre-sequence translocase-associated protein import motor (PAM) []. In Saccharomyces cerevisiae (Baker's yeast), Pam16 is required for preprotein translocation into the matrix, but not for protein insertion into the inner membrane [].; PDB: 2GUZ_J.
Probab=91.71 E-value=0.37 Score=41.22 Aligned_cols=53 Identities=21% Similarity=0.118 Sum_probs=37.8
Q ss_pred chhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChh
Q 017985 29 AYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPE 85 (363)
Q Consensus 29 ~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~~a~~~f~~i~~AY~vLsd~~ 85 (363)
.-..||||++..+.++|.+.|.+|-...+|++.++ .-.-.+|..|.+.|....
T Consensus 59 EA~~ILnv~~~~~~eeI~k~y~~Lf~~Nd~~kGGS----fYLQSKV~rAKErl~~El 111 (127)
T PF03656_consen 59 EARQILNVKEELSREEIQKRYKHLFKANDPSKGGS----FYLQSKVFRAKERLEQEL 111 (127)
T ss_dssp HHHHHHT--G--SHHHHHHHHHHHHHHT-CCCTS-----HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCCccCHHHHHHHHHHHHhccCCCcCCC----HHHHHHHHHHHHHHHHHH
Confidence 45789999999999999999999999999998752 233457788888776444
No 75
>PF13446 RPT: A repeated domain in UCH-protein
Probab=76.48 E-value=6.3 Score=28.94 Aligned_cols=26 Identities=27% Similarity=0.457 Sum_probs=23.7
Q ss_pred chhhhcCCCCCCCHHHHHHHHHHHHH
Q 017985 29 AYYDVLGVNVDASPAEIKKAYYLKAR 54 (363)
Q Consensus 29 ~~Y~iLgv~~~as~~eIkkaYr~la~ 54 (363)
+-|+.|||+++.+.+.|-.+|.....
T Consensus 6 ~Ay~~Lgi~~~~~Dd~Ii~~f~~~~~ 31 (62)
T PF13446_consen 6 EAYEILGIDEDTDDDFIISAFQSKVN 31 (62)
T ss_pred HHHHHhCcCCCCCHHHHHHHHHHHHH
Confidence 46999999999999999999998776
No 76
>KOG0724 consensus Zuotin and related molecular chaperones (DnaJ superfamily), contains DNA-binding domains [Posttranslational modification, protein turnover, chaperones]
Probab=73.08 E-value=3.2 Score=40.83 Aligned_cols=56 Identities=29% Similarity=0.326 Sum_probs=43.4
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCCCC----ChHHHHHHHHHHHHHHHcCChhHHHHHhhcC
Q 017985 39 DASPAEIKKAYYLKARIVHPDKNPG----DPKAAKNFQVLGEAYQVLSDPEKREAYDKHG 94 (363)
Q Consensus 39 ~as~~eIkkaYr~la~~~HPDk~~~----~~~a~~~f~~i~~AY~vLsd~~~R~~YD~~g 94 (363)
-++..+|+.+|+..+...||++... .....+.|++|.+||.||++...|...|..-
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~ka~~i~~~~~~~~t~~~~~ 62 (335)
T KOG0724|consen 3 LASEDELRLAYREMALKSHPEKKSFYEKLSLWTEEEFKKIEKALAILDDDEPRRTPDSWD 62 (335)
T ss_pred cccHHHHHHHHHHHhhhcCcHHHHHHHHhhhhHHHHHHHHHHHHHHHhccccccchhhhh
Confidence 3677899999999999999998741 1235567999999999999876655665543
No 77
>PF03207 OspD: Borrelia outer surface protein D (OspD); InterPro: IPR004894 This is a family of outer surface proteins from Borrelia. The function of these proteins is unknown.
Probab=59.67 E-value=69 Score=28.78 Aligned_cols=30 Identities=13% Similarity=0.459 Sum_probs=24.1
Q ss_pred HHHHHHHHHh------HHHHHHHHHHHHHHhcCCCC
Q 017985 286 AMLQSLWQIN------VVDIETTLSRVCQAVLKDPS 315 (363)
Q Consensus 286 ~~L~a~w~~~------~~DIe~tlr~Vc~kVL~D~~ 315 (363)
..++.+|+.+ ++|+|++|++.-+++-....
T Consensus 187 eaveiawkatv~akd~lidve~~vke~ldkiktet~ 222 (254)
T PF03207_consen 187 EAVEIAWKATVEAKDKLIDVENTVKETLDKIKTETT 222 (254)
T ss_pred HHHHHHHHHHhhhhhhHhhHHHHHHHHHHHHhhhcc
Confidence 3578899755 58999999999999976643
No 78
>PF14687 DUF4460: Domain of unknown function (DUF4460)
Probab=56.46 E-value=24 Score=29.45 Aligned_cols=47 Identities=19% Similarity=0.253 Sum_probs=33.4
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCChHH----HHHHHHHHHHHHHcCCh
Q 017985 38 VDASPAEIKKAYYLKARIVHPDKNPGDPKA----AKNFQVLGEAYQVLSDP 84 (363)
Q Consensus 38 ~~as~~eIkkaYr~la~~~HPDk~~~~~~a----~~~f~~i~~AY~vLsd~ 84 (363)
+..+..+++.+.|..-++.|||.....|+. ++-++.++.-.+.|..+
T Consensus 4 r~~~~~~l~~aLr~Fy~~VHPDlF~~~P~~k~~Ne~SLk~Ln~~Ld~l~~~ 54 (112)
T PF14687_consen 4 RNLSSPDLRSALRPFYFAVHPDLFGQHPEEKQVNEESLKLLNSYLDSLKKR 54 (112)
T ss_pred hhhhhHHHHHHHHHHHHHhCCcccccChHHHHhhHHHHHHHHHHHHHHhcc
Confidence 345677899999999999999987766652 23366666655555543
No 79
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=54.62 E-value=15 Score=33.77 Aligned_cols=41 Identities=24% Similarity=0.153 Sum_probs=31.1
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChh
Q 017985 37 NVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPE 85 (363)
Q Consensus 37 ~~~as~~eIkkaYr~la~~~HPDk~~~~~~a~~~f~~i~~AY~vLsd~~ 85 (363)
+++||.+||.+|+.++..+|-- |+ +.-..|..||+.+-=..
T Consensus 1 S~~ASfeEIq~Arn~ll~~y~g-----d~---~~~~~IEaAYD~ILM~r 41 (194)
T PF11833_consen 1 SEDASFEEIQAARNRLLAQYAG-----DE---KSREAIEAAYDAILMER 41 (194)
T ss_pred CCCCCHHHHHHHHHHHHHHhcC-----CH---HHHHHHHHHHHHHHHHH
Confidence 5799999999999999999832 22 34567999999654333
No 80
>COG5552 Uncharacterized conserved protein [Function unknown]
Probab=42.33 E-value=1.6e+02 Score=22.89 Aligned_cols=64 Identities=17% Similarity=0.246 Sum_probs=40.4
Q ss_pred cchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCC
Q 017985 28 TAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKE 96 (363)
Q Consensus 28 ~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~~a~~~f~~i~~AY~vLsd~~~R~~YD~~g~~ 96 (363)
+|--+++|+.|-|++.||+.|-++.+++..--..|+. ...+.|..-..+.. ...|+..|.....
T Consensus 3 RNIk~LfnfdPPAT~~EvrdAAlQfVRKlSGtT~PS~-~n~~AFe~AV~~ia----A~areLLDaLet~ 66 (88)
T COG5552 3 RNIKELFNFDPPATPVEVRDAALQFVRKLSGTTHPSA-ANAEAFEAAVAEIA----ATARELLDALETR 66 (88)
T ss_pred cchHHHhCCCCCCCcHHHHHHHHHHHHHhcCCCCcch-hhHHHHHHHHHHHH----HHHHHHHHhcccc
Confidence 4566789999999999999999888888755544432 22344543333222 2346666665443
No 81
>PF07739 TipAS: TipAS antibiotic-recognition domain; InterPro: IPR012925 TipAL is a bacterial transcriptional regulator of the MerR family. The tipA gene can be expressed as a long form, TipAL, and a short form, TipAS, which constitutes the C-terminal part of TipAL. TipAS forms the antibiotic-recognition domain []. This domain, which has an alpha-helical globin-like fold, is also found at the C terminus of other MerR family transcription factors, including Mta, a central regulator of multidrug resistance in Bacillus subtilis [], and SkgA from Caulobacter crescentus []. ; GO: 0003677 DNA binding, 0045892 negative regulation of transcription, DNA-dependent; PDB: 1NY9_A 3HH0_A 3QAO_A.
Probab=38.71 E-value=85 Score=25.30 Aligned_cols=52 Identities=25% Similarity=0.425 Sum_probs=33.8
Q ss_pred CCCCCCCHH-HHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHh-hcCC
Q 017985 35 GVNVDASPA-EIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYD-KHGK 95 (363)
Q Consensus 35 gv~~~as~~-eIkkaYr~la~~~HPDk~~~~~~a~~~f~~i~~AY~vLsd~~~R~~YD-~~g~ 95 (363)
|++|+.... +|-+.++.+...++|. + .+.+..|.+.| +.||.-+..|| .++.
T Consensus 51 g~~p~s~evq~l~~~~~~~~~~~~~~----~---~~~~~~l~~~y--~~~~~~~~~~~~~~~~ 104 (118)
T PF07739_consen 51 GVDPDSPEVQELAERWMELINQFTGG----D---PELLRGLAQMY--VEDPRFAAMYDKKFGP 104 (118)
T ss_dssp T--TT-HHHHHHHHHHHHHHHHSS----------HHHHHHHHHHT--TSTHHHHHHHG-GGST
T ss_pred CCCcCCHHHHHHHHHHHHHHHHHhCC----C---HHHHHHHHHHH--HcCHHHHhhccccCCH
Confidence 567765443 5677777777777661 2 24688888888 78999999998 6654
No 82
>COG1698 Uncharacterized protein conserved in archaea [Function unknown]
Probab=36.27 E-value=75 Score=25.60 Aligned_cols=36 Identities=19% Similarity=0.386 Sum_probs=25.4
Q ss_pred HHHHHHHHHH---HHhcCCCCCCHHHHHHHHHHHHHHHH
Q 017985 298 DIETTLSRVC---QAVLKDPSVSKETLKLRAKALKKLGT 333 (363)
Q Consensus 298 DIe~tlr~Vc---~kVL~D~~V~~~~R~~RA~aL~~LG~ 333 (363)
|-+..+++|| +.+.+|.+||.+.|+.-.+|.-.|-+
T Consensus 10 d~~e~i~q~~~lL~~Ii~DttVPRNIRraA~~a~e~L~~ 48 (93)
T COG1698 10 DSEEKINQVMQLLDEIIQDTTVPRNIRRAAEEAKEALNN 48 (93)
T ss_pred hhHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHhC
Confidence 4445555554 34778999999999888888776643
No 83
>KOG3442 consensus Uncharacterized conserved protein [Function unknown]
Probab=26.57 E-value=83 Score=26.91 Aligned_cols=34 Identities=21% Similarity=0.185 Sum_probs=29.7
Q ss_pred chhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCC
Q 017985 29 AYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNP 62 (363)
Q Consensus 29 ~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~ 62 (363)
.--.||+|++..+.++|.+.|-.|-....|.+..
T Consensus 60 Ea~qILnV~~~ln~eei~k~yehLFevNdkskGG 93 (132)
T KOG3442|consen 60 EAQQILNVKEPLNREEIEKRYEHLFEVNDKSKGG 93 (132)
T ss_pred HHhhHhCCCCCCCHHHHHHHHHHHHhccCcccCc
Confidence 3467999999999999999999999988777765
No 84
>PF04719 TAFII28: hTAFII28-like protein conserved region; InterPro: IPR006809 The general transcription factor, TFIID, consists of the TATA-binding protein (TBP) associated with a series of TBP-associated factors (TAFs) that together participate in the assembly of the transcription preinitiation complex. The conserved region is found at the C terminus of most member proteins. The crystal structure of hTAFII28 with hTAFII18 shows that this region is involved in the binding of these two subunits. The conserved region contains four alpha helices and three loops arranged as in histone H3 [, ].; GO: 0006367 transcription initiation from RNA polymerase II promoter, 0005634 nucleus; PDB: 1BH9_B 1BH8_B.
Probab=26.05 E-value=1.2e+02 Score=24.42 Aligned_cols=52 Identities=17% Similarity=0.275 Sum_probs=30.6
Q ss_pred HHHHhHHHHHHHHHHHHHHhcCCCCCCHHHHH-HHHHHHHHHHHHHHhchhccc
Q 017985 291 LWQINVVDIETTLSRVCQAVLKDPSVSKETLK-LRAKALKKLGTIFQGAKAAYS 343 (363)
Q Consensus 291 ~w~~~~~DIe~tlr~Vc~kVL~D~~V~~~~R~-~RA~aL~~LG~if~~~~~~~~ 343 (363)
.|+-+.|. -.+||++|..++.+.+|+..... -++-|=.++|++...+..-.+
T Consensus 18 ~fRRs~~~-k~~ikkli~~~~~~qsv~~~v~i~v~g~aKvFVGEiVE~A~~Vq~ 70 (90)
T PF04719_consen 18 AFRRSSFN-KAAIKKLINQVLGNQSVSQNVVIAVAGIAKVFVGEIVEEARDVQE 70 (90)
T ss_dssp HHHH-----HHHHHHHHHHHHS-S---HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHccCC-HHHHHHHHHHHcCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444443 24799999999999999998764 355666777887776654333
No 85
>PF07709 SRR: Seven Residue Repeat; InterPro: IPR011714 This repeat is found in some Plasmodium and Theileria proteins.
Probab=22.96 E-value=69 Score=16.57 Aligned_cols=13 Identities=38% Similarity=0.667 Sum_probs=9.7
Q ss_pred HHHHHHHHHHHcC
Q 017985 70 NFQVLGEAYQVLS 82 (363)
Q Consensus 70 ~f~~i~~AY~vLs 82 (363)
.|..+..||+.|+
T Consensus 2 ~~~~V~~aY~~l~ 14 (14)
T PF07709_consen 2 KFEKVKNAYEQLS 14 (14)
T ss_pred cHHHHHHHHHhcC
Confidence 4777888888764
No 86
>PF03685 UPF0147: Uncharacterised protein family (UPF0147); InterPro: IPR005354 The proteins in this entry are functionally uncharacterised.; PDB: 2QZG_C 2QSB_A.
Probab=22.03 E-value=1.4e+02 Score=23.80 Aligned_cols=33 Identities=18% Similarity=0.328 Sum_probs=19.7
Q ss_pred HHHHHHHH---HHhcCCCCCCHHHHHHHHHHHHHHH
Q 017985 300 ETTLSRVC---QAVLKDPSVSKETLKLRAKALKKLG 332 (363)
Q Consensus 300 e~tlr~Vc---~kVL~D~~V~~~~R~~RA~aL~~LG 332 (363)
+.++++|+ +.+..|.+||.+.|+.=-+|...|.
T Consensus 5 e~~i~~~~~~L~~I~~D~sVPRNIRr~a~ea~~~L~ 40 (85)
T PF03685_consen 5 EEKIKQAIQMLERIINDTSVPRNIRRAAEEAKEILN 40 (85)
T ss_dssp HHHHHHHHHHHHHHHT-TTS-HHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHh
Confidence 34444443 4667788888888877777665554
No 87
>PF10041 DUF2277: Uncharacterized conserved protein (DUF2277); InterPro: IPR018735 Members of this family of hypothetical bacterial proteins have no known function.
Probab=21.63 E-value=3.9e+02 Score=20.90 Aligned_cols=34 Identities=21% Similarity=0.158 Sum_probs=27.6
Q ss_pred chhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCC
Q 017985 29 AYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNP 62 (363)
Q Consensus 29 ~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~ 62 (363)
|--.+.|+.|-+|.+||+.|-.+.++|..--..|
T Consensus 4 nI~~L~~fePpaT~~EI~aAAlQyVRKvSG~~~P 37 (78)
T PF10041_consen 4 NIKTLRNFEPPATDEEIRAAALQYVRKVSGFRKP 37 (78)
T ss_pred chhhhcCCCCCCCHHHHHHHHHHHHHHHccCCCc
Confidence 4456678899999999999999999988655555
No 88
>PRK04330 hypothetical protein; Provisional
Probab=21.47 E-value=1.7e+02 Score=23.44 Aligned_cols=34 Identities=18% Similarity=0.256 Sum_probs=23.9
Q ss_pred HHHHHHHHH---HHhcCCCCCCHHHHHHHHHHHHHHH
Q 017985 299 IETTLSRVC---QAVLKDPSVSKETLKLRAKALKKLG 332 (363)
Q Consensus 299 Ie~tlr~Vc---~kVL~D~~V~~~~R~~RA~aL~~LG 332 (363)
-+.++++++ +.+.+|.+||.+.|+.=.++...|.
T Consensus 7 ~e~~ik~~~~~L~~I~~D~sVPRNIRraa~ea~~~L~ 43 (88)
T PRK04330 7 NEEKIKQAIQMLEEIINDTSVPRNIRRAATEAKEILL 43 (88)
T ss_pred hHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHh
Confidence 344444443 4678899999999888877777664
No 89
>PF14891 Peptidase_M91: Effector protein
Probab=21.33 E-value=1.2e+02 Score=26.94 Aligned_cols=31 Identities=29% Similarity=0.518 Sum_probs=28.1
Q ss_pred ccCChhHHHHHHHHHHHHHhcCcchHHHHHHH
Q 017985 177 VDGRADEFVKWANAEARRLSGAAFGEAMLHTI 208 (363)
Q Consensus 177 v~~~~~~~~~~~~~Ea~~L~~~sfG~~iL~~I 208 (363)
++|. +.|++.++.-+..|..++-|..||..|
T Consensus 7 ~~Gs-d~F~~rv~~~L~~i~ssptG~~mL~~l 37 (174)
T PF14891_consen 7 VEGS-DEFKQRVEAALDMIRSSPTGQQMLREL 37 (174)
T ss_pred ecCC-HHHHHHHHHHHHHHhcCchHHHHHHHH
Confidence 4565 589999999999999999999999999
No 90
>PF06412 TraD: Conjugal transfer protein TraD; InterPro: IPR009444 This family consists of a group of TraD conjugal transfer proteins found primarily, though not exclusively, in the alphaproteobacteria [].; GO: 0000746 conjugation
Probab=20.67 E-value=83 Score=23.53 Aligned_cols=27 Identities=19% Similarity=0.144 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhchhcccc
Q 017985 318 KETLKLRAKALKKLGTIFQGAKAAYSR 344 (363)
Q Consensus 318 ~~~R~~RA~aL~~LG~if~~~~~~~~~ 344 (363)
.+.|+.|+.-+..||.++.+++-+..+
T Consensus 3 ~~~Rk~rtr~~i~lGgLV~kAGl~~~d 29 (65)
T PF06412_consen 3 EKARKARTRRKIQLGGLVIKAGLDDLD 29 (65)
T ss_pred hHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 468999999999999999999855443
No 91
>KOG0543 consensus FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]
Probab=20.43 E-value=9.3e+02 Score=24.66 Aligned_cols=62 Identities=21% Similarity=0.113 Sum_probs=43.4
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHH------HHHhchhcccccC
Q 017985 285 DAMLQSLWQINVVDIETTLSRVCQAVLKDPSVSKETLKLRAKALKKLGT------IFQGAKAAYSREN 346 (363)
Q Consensus 285 ~~~L~a~w~~~~~DIe~tlr~Vc~kVL~D~~V~~~~R~~RA~aL~~LG~------if~~~~~~~~~~~ 346 (363)
...|+.+..-.|++=-.-.-+-|++||.=..=+.+-..+|++|+..+|+ .|+++..-...+.
T Consensus 258 ~~~lNlA~c~lKl~~~~~Ai~~c~kvLe~~~~N~KALyRrG~A~l~~~e~~~A~~df~ka~k~~P~Nk 325 (397)
T KOG0543|consen 258 ACHLNLAACYLKLKEYKEAIESCNKVLELDPNNVKALYRRGQALLALGEYDLARDDFQKALKLEPSNK 325 (397)
T ss_pred HHhhHHHHHHHhhhhHHHHHHHHHHHHhcCCCchhHHHHHHHHHHhhccHHHHHHHHHHHHHhCCCcH
Confidence 3335544444444444467788999999888899999999999999996 3565555444433
Done!