Query 017985
Match_columns 363
No_of_seqs 290 out of 2342
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 08:04:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017985.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017985hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2dn9_A DNAJ homolog subfamily 99.8 3.7E-21 1.2E-25 149.5 8.6 71 27-97 6-76 (79)
2 1hdj_A Human HSP40, HDJ-1; mol 99.8 4E-21 1.4E-25 148.7 8.5 72 28-100 3-74 (77)
3 2och_A Hypothetical protein DN 99.8 4.6E-21 1.6E-25 146.8 8.5 71 23-96 3-73 (73)
4 1bq0_A DNAJ, HSP40; chaperone, 99.8 1.4E-21 4.7E-26 159.7 5.0 73 28-100 3-75 (103)
5 2ctw_A DNAJ homolog subfamily 99.8 2.9E-20 1E-24 153.4 10.7 73 24-96 13-85 (109)
6 2ej7_A HCG3 gene; HCG3 protein 99.8 1.7E-20 5.8E-25 146.7 8.6 72 27-98 8-80 (82)
7 2ctp_A DNAJ homolog subfamily 99.8 2.2E-20 7.6E-25 144.8 8.5 71 26-97 5-75 (78)
8 2cug_A Mkiaa0962 protein; DNAJ 99.8 2.9E-20 9.9E-25 147.6 9.1 72 25-97 14-85 (88)
9 2ctq_A DNAJ homolog subfamily 99.8 9.9E-21 3.4E-25 156.9 6.3 75 25-99 17-91 (112)
10 2yua_A Williams-beuren syndrom 99.8 5.2E-20 1.8E-24 149.3 9.6 74 22-95 11-84 (99)
11 2dmx_A DNAJ homolog subfamily 99.8 6.1E-20 2.1E-24 146.8 7.6 74 27-100 8-82 (92)
12 1wjz_A 1700030A21RIK protein; 99.8 7E-20 2.4E-24 146.8 7.7 75 22-96 10-90 (94)
13 2ctr_A DNAJ homolog subfamily 99.8 8E-20 2.7E-24 145.0 7.7 71 27-98 6-76 (88)
14 2lgw_A DNAJ homolog subfamily 99.8 5E-20 1.7E-24 149.5 6.7 73 28-100 2-75 (99)
15 2o37_A Protein SIS1; HSP40, J- 99.8 1E-19 3.5E-24 145.6 7.9 73 23-98 3-75 (92)
16 2qsa_A DNAJ homolog DNJ-2; J-d 99.8 6.5E-20 2.2E-24 151.2 4.7 89 24-114 11-103 (109)
17 3apq_A DNAJ homolog subfamily 99.8 2.5E-19 8.7E-24 162.1 9.0 73 28-100 2-74 (210)
18 3bvo_A CO-chaperone protein HS 99.7 1.2E-17 4.2E-22 152.4 13.1 97 10-107 26-132 (207)
19 3hho_A CO-chaperone protein HS 99.7 2.8E-17 9.7E-22 146.3 12.4 68 27-94 3-77 (174)
20 2l6l_A DNAJ homolog subfamily 99.7 6.5E-18 2.2E-22 147.5 7.0 70 26-95 8-83 (155)
21 1fpo_A HSC20, chaperone protei 99.7 5.1E-17 1.7E-21 144.3 12.7 68 28-95 1-75 (171)
22 3lz8_A Putative chaperone DNAJ 99.7 7.2E-19 2.5E-23 171.2 0.0 70 26-96 26-95 (329)
23 2ys8_A RAB-related GTP-binding 99.7 7.1E-18 2.4E-22 134.4 4.8 62 26-88 25-86 (90)
24 1gh6_A Large T antigen; tumor 99.7 1.5E-18 5.2E-23 144.2 -1.2 86 27-125 7-94 (114)
25 1faf_A Large T antigen; J doma 99.7 5.2E-17 1.8E-21 126.4 4.3 65 28-97 11-77 (79)
26 2pf4_E Small T antigen; PP2A, 99.6 1.1E-17 3.8E-22 148.4 -0.3 64 28-95 11-76 (174)
27 1iur_A KIAA0730 protein; DNAJ 99.6 1.1E-16 3.8E-21 127.0 2.9 61 27-87 15-76 (88)
28 3apo_A DNAJ homolog subfamily 99.6 8.7E-17 3E-21 171.7 1.1 78 23-100 16-93 (780)
29 3uo3_A J-type CO-chaperone JAC 99.6 1.5E-15 5.2E-20 135.9 8.4 65 26-93 9-80 (181)
30 2qwo_B Putative tyrosine-prote 99.6 2.2E-16 7.6E-21 126.1 2.5 56 28-83 33-91 (92)
31 1n4c_A Auxilin; four helix bun 99.6 2E-16 6.8E-21 141.2 1.8 64 27-90 116-182 (182)
32 3ag7_A Putative uncharacterize 99.6 6.9E-16 2.4E-20 126.6 3.2 59 26-85 39-104 (106)
33 2guz_A Mitochondrial import in 99.5 3.9E-15 1.3E-19 113.4 2.7 57 27-87 13-70 (71)
34 2y4t_A DNAJ homolog subfamily 98.9 6.7E-10 2.3E-14 107.5 4.6 66 27-92 381-449 (450)
35 2guz_B Mitochondrial import in 98.6 4.6E-08 1.6E-12 72.9 5.1 51 29-83 5-58 (65)
36 2pzi_A Probable serine/threoni 83.5 0.56 1.9E-05 48.7 3.1 49 24-80 625-675 (681)
37 2qzg_A Conserved uncharacteriz 32.2 19 0.00067 28.0 1.8 41 291-331 4-47 (94)
38 1ny9_A Transcriptional activat 27.1 1.1E+02 0.0039 24.7 5.9 53 35-95 71-124 (143)
39 1ceu_A Protein (HIV-1 regulato 26.9 81 0.0028 21.7 3.9 29 182-210 16-44 (51)
40 3cjl_A Domain of unknown funct 25.9 1.2E+02 0.0042 23.1 5.3 37 305-341 32-68 (88)
41 2cqn_A Formin-binding protein 25.2 1.4E+02 0.0049 21.9 5.5 53 40-93 6-61 (77)
42 2qsb_A UPF0147 protein TA0600; 20.3 1.8E+02 0.0063 22.2 5.2 26 306-331 18-43 (89)
43 1qqr_A Streptokinase domain B; 20.3 62 0.0021 26.8 2.8 34 27-60 31-64 (138)
No 1
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.84 E-value=3.7e-21 Score=149.51 Aligned_cols=71 Identities=52% Similarity=0.789 Sum_probs=67.6
Q ss_pred CcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCCC
Q 017985 27 DTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEG 97 (363)
Q Consensus 27 ~~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~~a~~~f~~i~~AY~vLsd~~~R~~YD~~g~~~ 97 (363)
..|||+||||+++++..+||++||+++++||||++++++.+.+.|+.|++||++|+||.+|..||.+|..+
T Consensus 6 ~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 76 (79)
T 2dn9_A 6 SGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSGP 76 (79)
T ss_dssp CSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHHHHHHHSCCCC
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHhccCcC
Confidence 46899999999999999999999999999999999988889999999999999999999999999999764
No 2
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.84 E-value=4e-21 Score=148.67 Aligned_cols=72 Identities=49% Similarity=0.804 Sum_probs=67.1
Q ss_pred cchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCCCCCC
Q 017985 28 TAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGIPQ 100 (363)
Q Consensus 28 ~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~~a~~~f~~i~~AY~vLsd~~~R~~YD~~g~~~~~~ 100 (363)
.|||+||||+++++.++||+|||+++++||||+++ ++.+.+.|+.|++||++|+||.+|..||.+|.+++..
T Consensus 3 ~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~-~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~ 74 (77)
T 1hdj_A 3 KDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNK-EPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLKG 74 (77)
T ss_dssp CCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCC-CTTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGGGCCS
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHHHHCCHHHHHHHHHHccccccc
Confidence 58999999999999999999999999999999997 4678899999999999999999999999999876553
No 3
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.84 E-value=4.6e-21 Score=146.85 Aligned_cols=71 Identities=58% Similarity=0.886 Sum_probs=63.1
Q ss_pred cccCCcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCC
Q 017985 23 AMVKDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKE 96 (363)
Q Consensus 23 ~~~~~~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~~a~~~f~~i~~AY~vLsd~~~R~~YD~~g~~ 96 (363)
.|+.+.+||+||||+++++..+||++||+++++||||+++++ .+.|+.|++||++|+||.+|..||.+|.+
T Consensus 3 ~m~~~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~---~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~ 73 (73)
T 2och_A 3 AMVKETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDG---AEQFKQISQAYEVLSDEKKRQIYDQGGEE 73 (73)
T ss_dssp ---CCCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTC---HHHHHHHHHHHHHHTSHHHHHHHHHTC--
T ss_pred cccCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCH---HHHHHHHHHHHHHHCCHHHHHHHHhcCCC
Confidence 477889999999999999999999999999999999999754 57899999999999999999999999963
No 4
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.83 E-value=1.4e-21 Score=159.67 Aligned_cols=73 Identities=45% Similarity=0.742 Sum_probs=68.9
Q ss_pred cchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCCCCCC
Q 017985 28 TAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGIPQ 100 (363)
Q Consensus 28 ~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~~a~~~f~~i~~AY~vLsd~~~R~~YD~~g~~~~~~ 100 (363)
.|||+||||+++++.++||++||+|+++||||++++++.+.++|+.|++||++|+||.+|..||.+|..++..
T Consensus 3 ~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~ 75 (103)
T 1bq0_A 3 QDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQ 75 (103)
T ss_dssp CCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTSSCS
T ss_pred CCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhhhcc
Confidence 5899999999999999999999999999999999877889999999999999999999999999999877653
No 5
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.82 E-value=2.9e-20 Score=153.39 Aligned_cols=73 Identities=40% Similarity=0.654 Sum_probs=68.7
Q ss_pred ccCCcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCC
Q 017985 24 MVKDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKE 96 (363)
Q Consensus 24 ~~~~~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~~a~~~f~~i~~AY~vLsd~~~R~~YD~~g~~ 96 (363)
.....+||+||||+++|+.++||++||+|+++||||++++++.+.++|+.|++||++|+||.+|..||.+|..
T Consensus 13 ~~~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~ 85 (109)
T 2ctw_A 13 STSGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGSL 85 (109)
T ss_dssp TSCSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTCHH
T ss_pred CCCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHHHHHHhccc
Confidence 4456899999999999999999999999999999999998888999999999999999999999999999854
No 6
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.82 E-value=1.7e-20 Score=146.72 Aligned_cols=72 Identities=46% Similarity=0.672 Sum_probs=66.7
Q ss_pred CcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh-HHHHHHHHHHHHHHHcCChhHHHHHhhcCCCCC
Q 017985 27 DTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDP-KAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGI 98 (363)
Q Consensus 27 ~~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~-~a~~~f~~i~~AY~vLsd~~~R~~YD~~g~~~~ 98 (363)
..+||+||||+++++.++||+|||+++++||||++++.+ .+.+.|+.|++||++|+||.+|..||.+|..+.
T Consensus 8 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~~ 80 (82)
T 2ej7_A 8 MVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGSGPS 80 (82)
T ss_dssp SCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCCCSC
T ss_pred CcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCcccc
Confidence 468999999999999999999999999999999998654 578899999999999999999999999997654
No 7
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.82 E-value=2.2e-20 Score=144.77 Aligned_cols=71 Identities=46% Similarity=0.770 Sum_probs=66.5
Q ss_pred CCcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCCC
Q 017985 26 KDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEG 97 (363)
Q Consensus 26 ~~~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~~a~~~f~~i~~AY~vLsd~~~R~~YD~~g~~~ 97 (363)
...|||+||||+++++..+||++||+++++||||+++ .+.+.+.|+.|++||++|+||.+|..||.+|..+
T Consensus 5 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~ 75 (78)
T 2ctp_A 5 SSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNH-APGATEAFKAIGTAYAVLSNPEKRKQYDQFGSGP 75 (78)
T ss_dssp CSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCS-SHHHHHHHHHHHHHHHHHTSHHHHHHHHHTCSCS
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHHHHCCHHHHHHHHHcCccc
Confidence 3568999999999999999999999999999999997 5788999999999999999999999999999764
No 8
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.82 E-value=2.9e-20 Score=147.57 Aligned_cols=72 Identities=47% Similarity=0.640 Sum_probs=67.2
Q ss_pred cCCcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCCC
Q 017985 25 VKDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEG 97 (363)
Q Consensus 25 ~~~~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~~a~~~f~~i~~AY~vLsd~~~R~~YD~~g~~~ 97 (363)
..+.|||+||||+++++.++||++||+++++||||++++ +.+.+.|+.|++||++|+||.+|..||.+|..+
T Consensus 14 ~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~-~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 85 (88)
T 2cug_A 14 ALDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKD-PGAEDRFIQISKAYEILSNEEKRTNYDHYGSGP 85 (88)
T ss_dssp SSSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCS-TTHHHHHHHHHHHHHHHHSHHHHHHHHHHTTCC
T ss_pred cCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC-hhHHHHHHHHHHHHHHHCCHHHHHHHHHcCCCC
Confidence 357899999999999999999999999999999999974 678899999999999999999999999999754
No 9
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.82 E-value=9.9e-21 Score=156.91 Aligned_cols=75 Identities=32% Similarity=0.566 Sum_probs=69.9
Q ss_pred cCCcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCCCCC
Q 017985 25 VKDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGIP 99 (363)
Q Consensus 25 ~~~~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~~a~~~f~~i~~AY~vLsd~~~R~~YD~~g~~~~~ 99 (363)
....|||+||||+++|+.++||+|||+++++||||++++++.+.++|+.|++||++|+||.+|..||.+|..+..
T Consensus 17 ~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~ 91 (112)
T 2ctq_A 17 EDTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRARYDHWRRSQMS 91 (112)
T ss_dssp CCCCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHTCS
T ss_pred cCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhhccC
Confidence 355799999999999999999999999999999999998888999999999999999999999999999976643
No 10
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.81 E-value=5.2e-20 Score=149.28 Aligned_cols=74 Identities=39% Similarity=0.620 Sum_probs=68.3
Q ss_pred ccccCCcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCC
Q 017985 22 KAMVKDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGK 95 (363)
Q Consensus 22 ~~~~~~~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~~a~~~f~~i~~AY~vLsd~~~R~~YD~~g~ 95 (363)
.+.....+||+||||+++|+.++||+|||+|+++||||++++++.+.++|+.|++||+||+||.+|..||.+..
T Consensus 11 ~~~~~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~l~ 84 (99)
T 2yua_A 11 DCSYSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDRGLL 84 (99)
T ss_dssp CCSSCSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHHHHHTCC
T ss_pred CCCCCccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHhcc
Confidence 34456789999999999999999999999999999999998888899999999999999999999999998643
No 11
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.80 E-value=6.1e-20 Score=146.77 Aligned_cols=74 Identities=49% Similarity=0.768 Sum_probs=67.8
Q ss_pred CcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hHHHHHHHHHHHHHHHcCChhHHHHHhhcCCCCCCC
Q 017985 27 DTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGD-PKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGIPQ 100 (363)
Q Consensus 27 ~~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~-~~a~~~f~~i~~AY~vLsd~~~R~~YD~~g~~~~~~ 100 (363)
..|||+||||+++++.++||++||+++++||||+++.+ +.+.++|+.|++||++|+||.+|..||.+|..+...
T Consensus 8 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~ 82 (92)
T 2dmx_A 8 MANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDSWRA 82 (92)
T ss_dssp CCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSCSSCC
T ss_pred CcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccC
Confidence 35899999999999999999999999999999999865 368899999999999999999999999999876543
No 12
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.80 E-value=7e-20 Score=146.76 Aligned_cols=75 Identities=23% Similarity=0.478 Sum_probs=67.5
Q ss_pred ccccCCcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC------hHHHHHHHHHHHHHHHcCChhHHHHHhhcCC
Q 017985 22 KAMVKDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGD------PKAAKNFQVLGEAYQVLSDPEKREAYDKHGK 95 (363)
Q Consensus 22 ~~~~~~~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~------~~a~~~f~~i~~AY~vLsd~~~R~~YD~~g~ 95 (363)
.......|||+||||+++|+..+||+|||+++++||||+++.+ +.+.++|+.|++||++|+||.+|..||.+..
T Consensus 10 ~~~~~~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l~ 89 (94)
T 1wjz_A 10 LEQTLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRS 89 (94)
T ss_dssp CSSSSCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSC
T ss_pred cccCCCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHcc
Confidence 3445678999999999999999999999999999999999753 4588999999999999999999999999875
Q ss_pred C
Q 017985 96 E 96 (363)
Q Consensus 96 ~ 96 (363)
.
T Consensus 90 ~ 90 (94)
T 1wjz_A 90 G 90 (94)
T ss_dssp C
T ss_pred C
Confidence 3
No 13
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.80 E-value=8e-20 Score=145.02 Aligned_cols=71 Identities=44% Similarity=0.713 Sum_probs=66.4
Q ss_pred CcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCCCC
Q 017985 27 DTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGI 98 (363)
Q Consensus 27 ~~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~~a~~~f~~i~~AY~vLsd~~~R~~YD~~g~~~~ 98 (363)
..+||+||||+++++.++||++||+++++||||+++ ++.+.++|+.|++||++|+||.+|..||.+|..++
T Consensus 6 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~ 76 (88)
T 2ctr_A 6 SGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNK-SPDAEAKFREIAEAYETLSDANRRKEYDTLGHSAF 76 (88)
T ss_dssp CCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCC-SHHHHHHHHHHHHHHHHHHSSHHHHHHHHTCHHHH
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCC-ChHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccc
Confidence 468999999999999999999999999999999998 67899999999999999999999999999986543
No 14
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.80 E-value=5e-20 Score=149.50 Aligned_cols=73 Identities=51% Similarity=0.787 Sum_probs=64.9
Q ss_pred cchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hHHHHHHHHHHHHHHHcCChhHHHHHhhcCCCCCCC
Q 017985 28 TAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGD-PKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGIPQ 100 (363)
Q Consensus 28 ~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~-~~a~~~f~~i~~AY~vLsd~~~R~~YD~~g~~~~~~ 100 (363)
.|||+||||+++|+.++||+|||+++++||||++++. +.+.+.|+.|++||++|+||.+|..||.+|..+...
T Consensus 2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~~~~~ 75 (99)
T 2lgw_A 2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTG 75 (99)
T ss_dssp CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC----
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccC
Confidence 4899999999999999999999999999999999865 348899999999999999999999999999876543
No 15
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.79 E-value=1e-19 Score=145.62 Aligned_cols=73 Identities=48% Similarity=0.785 Sum_probs=66.4
Q ss_pred cccCCcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCCCC
Q 017985 23 AMVKDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGI 98 (363)
Q Consensus 23 ~~~~~~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~~a~~~f~~i~~AY~vLsd~~~R~~YD~~g~~~~ 98 (363)
.|..+.|||+||||+++++.++||++||+++++||||+++++ .++|+.|++||++|+||.+|..||.+|..+.
T Consensus 3 ~m~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~---~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~ 75 (92)
T 2o37_A 3 AMVKETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGD---TEKFKEISEAFEILNDPQKREIYDQYGLEAA 75 (92)
T ss_dssp -CCSCCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCC---HHHHHHHHHHHHHHTSHHHHHHHHHHCHHHH
T ss_pred ccccCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCh---HHHHHHHHHHHHHHCCHHHHHHHHHHCHHHh
Confidence 467788999999999999999999999999999999999765 4689999999999999999999999997543
No 16
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.78 E-value=6.5e-20 Score=151.16 Aligned_cols=89 Identities=27% Similarity=0.353 Sum_probs=72.5
Q ss_pred ccCCcchhhhcCCCCCC-CHHHHHHHHHHHHHHhCCCCCCC---ChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCCCCC
Q 017985 24 MVKDTAYYDVLGVNVDA-SPAEIKKAYYLKARIVHPDKNPG---DPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGIP 99 (363)
Q Consensus 24 ~~~~~~~Y~iLgv~~~a-s~~eIkkaYr~la~~~HPDk~~~---~~~a~~~f~~i~~AY~vLsd~~~R~~YD~~g~~~~~ 99 (363)
+....|||+||||+++| +.++||+|||+++++||||++++ .+.+.+.|+.|++||++|+||.+|..||.+|....
T Consensus 11 ~~~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~~~~- 89 (109)
T 2qsa_A 11 YCGLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLDHPD- 89 (109)
T ss_dssp TTTTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTT-
T ss_pred HcCCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhccCch-
Confidence 34567999999999999 99999999999999999999975 35688999999999999999999999999986432
Q ss_pred CCCccchhhhhhhcc
Q 017985 100 QDSMVDAAAVFGMIF 114 (363)
Q Consensus 100 ~~~~~d~~~~f~~~f 114 (363)
....+...+|...|
T Consensus 90 -~~~~~~~~~~~~~~ 103 (109)
T 2qsa_A 90 -QRFYNYYQYYRLRA 103 (109)
T ss_dssp -CHHHHHHHHHHHC-
T ss_pred -HHHHHHHHHHHHHh
Confidence 22334444444444
No 17
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.78 E-value=2.5e-19 Score=162.13 Aligned_cols=73 Identities=41% Similarity=0.737 Sum_probs=69.0
Q ss_pred cchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCCCCCC
Q 017985 28 TAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGIPQ 100 (363)
Q Consensus 28 ~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~~a~~~f~~i~~AY~vLsd~~~R~~YD~~g~~~~~~ 100 (363)
.|||++|||+++|+.++||+|||+++++||||++++++++.++|+.|++||++|+||.+|+.||.+|..+...
T Consensus 2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~~~ 74 (210)
T 3apq_A 2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLED 74 (210)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTTTCCT
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHHHHHHhccccccc
Confidence 4899999999999999999999999999999999888889999999999999999999999999999876543
No 18
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.74 E-value=1.2e-17 Score=152.45 Aligned_cols=97 Identities=24% Similarity=0.365 Sum_probs=74.6
Q ss_pred cccccCCCccccccccCCcchhhhcCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCChH-----HHHHHHHHHHHHHHcC
Q 017985 10 DSLFGRKSSGEKKAMVKDTAYYDVLGVNVD--ASPAEIKKAYYLKARIVHPDKNPGDPK-----AAKNFQVLGEAYQVLS 82 (363)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~Y~iLgv~~~--as~~eIkkaYr~la~~~HPDk~~~~~~-----a~~~f~~i~~AY~vLs 82 (363)
..+||..+...+. .....|||++|||+++ ++..+||++||+|+++||||++++++. +.++|+.|++||+||+
T Consensus 26 ~~~fC~~c~~~q~-~~~~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLs 104 (207)
T 3bvo_A 26 DRFFCPQCRALQA-PDPTRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLL 104 (207)
T ss_dssp CCCBCTTTCCBCC-CCTTCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccCC-CCCCCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
Confidence 4577776655442 2346799999999986 789999999999999999999986543 5678999999999999
Q ss_pred ChhHHHHHhh--cCCCCCCC-CCccchh
Q 017985 83 DPEKREAYDK--HGKEGIPQ-DSMVDAA 107 (363)
Q Consensus 83 d~~~R~~YD~--~g~~~~~~-~~~~d~~ 107 (363)
||.+|..||. +|..-... ...+||.
T Consensus 105 dp~~R~~Yd~~l~G~~~~~e~~~~~d~~ 132 (207)
T 3bvo_A 105 APLSRGLYLLKLHGIEIPERTDYEMDRQ 132 (207)
T ss_dssp SHHHHHHHHHHHTTCCCCSSCSSSSCHH
T ss_pred CHHHHHHHHHHhcCCCcccccccCCCHH
Confidence 9999999985 45432222 2345554
No 19
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.72 E-value=2.8e-17 Score=146.28 Aligned_cols=68 Identities=21% Similarity=0.400 Sum_probs=61.9
Q ss_pred CcchhhhcCCCCCCC--HHHHHHHHHHHHHHhCCCCCCCChH-----HHHHHHHHHHHHHHcCChhHHHHHhhcC
Q 017985 27 DTAYYDVLGVNVDAS--PAEIKKAYYLKARIVHPDKNPGDPK-----AAKNFQVLGEAYQVLSDPEKREAYDKHG 94 (363)
Q Consensus 27 ~~~~Y~iLgv~~~as--~~eIkkaYr~la~~~HPDk~~~~~~-----a~~~f~~i~~AY~vLsd~~~R~~YD~~g 94 (363)
..|||+||||+++++ ..+||++||+++++||||++++.+. +.+.|+.|++||+||+||.+|..||...
T Consensus 3 ~~d~Y~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l 77 (174)
T 3hho_A 3 AMNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRAEYLLSL 77 (174)
T ss_dssp -CCHHHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHH
T ss_pred CCCHHHHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHc
Confidence 469999999999998 9999999999999999999987654 6689999999999999999999999843
No 20
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.71 E-value=6.5e-18 Score=147.47 Aligned_cols=70 Identities=24% Similarity=0.509 Sum_probs=63.8
Q ss_pred CCcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh------HHHHHHHHHHHHHHHcCChhHHHHHhhcCC
Q 017985 26 KDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDP------KAAKNFQVLGEAYQVLSDPEKREAYDKHGK 95 (363)
Q Consensus 26 ~~~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~------~a~~~f~~i~~AY~vLsd~~~R~~YD~~g~ 95 (363)
...|||+||||+++++.++||+|||++++++|||++++.+ .+.+.|+.|++||++|+||.+|+.||..+.
T Consensus 8 ~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~~ 83 (155)
T 2l6l_A 8 PKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQRC 83 (155)
T ss_dssp CCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHHH
T ss_pred CCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHcc
Confidence 4569999999999999999999999999999999998653 267899999999999999999999998663
No 21
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=99.71 E-value=5.1e-17 Score=144.25 Aligned_cols=68 Identities=21% Similarity=0.331 Sum_probs=62.2
Q ss_pred cchhhhcCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCChH-----HHHHHHHHHHHHHHcCChhHHHHHhhcCC
Q 017985 28 TAYYDVLGVNVDA--SPAEIKKAYYLKARIVHPDKNPGDPK-----AAKNFQVLGEAYQVLSDPEKREAYDKHGK 95 (363)
Q Consensus 28 ~~~Y~iLgv~~~a--s~~eIkkaYr~la~~~HPDk~~~~~~-----a~~~f~~i~~AY~vLsd~~~R~~YD~~g~ 95 (363)
+|||++|||++++ +..+||++||+++++||||++++.+. +.++|+.|++||+||+||.+|..||....
T Consensus 1 ~d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l~ 75 (171)
T 1fpo_A 1 MDYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSLH 75 (171)
T ss_dssp CHHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHTT
T ss_pred CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHhc
Confidence 3799999999999 99999999999999999999987653 45789999999999999999999998654
No 22
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=99.71 E-value=7.2e-19 Score=171.16 Aligned_cols=70 Identities=36% Similarity=0.552 Sum_probs=0.0
Q ss_pred CCcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCC
Q 017985 26 KDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKE 96 (363)
Q Consensus 26 ~~~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~~a~~~f~~i~~AY~vLsd~~~R~~YD~~g~~ 96 (363)
...|||++|||+++||.++||+|||+|+++||||+++ ++.+.++|++|++||++|+||.+|+.||+++..
T Consensus 26 ~~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~-~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~ 95 (329)
T 3lz8_A 26 ELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSK-ENDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQH 95 (329)
T ss_dssp -----------------------------------------------------------------------
T ss_pred cccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCC-ChHHHHHHHHHHHHHHHhhhhhhhcccchhhcc
Confidence 3469999999999999999999999999999999997 457889999999999999999999999998543
No 23
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.70 E-value=7.1e-18 Score=134.39 Aligned_cols=62 Identities=32% Similarity=0.437 Sum_probs=58.0
Q ss_pred CCcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHH
Q 017985 26 KDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKRE 88 (363)
Q Consensus 26 ~~~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~~a~~~f~~i~~AY~vLsd~~~R~ 88 (363)
...|||+||||+++|+.++||+|||+++++||||+++ ++.+.++|+.|++||++|+||.+|.
T Consensus 25 ~~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~-~~~~~~~f~~i~~Ay~~L~d~~~R~ 86 (90)
T 2ys8_A 25 NSKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCV-APGSEDAFKAVVNARTALLKNIKSG 86 (90)
T ss_dssp TCSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCC-CTTHHHHHHHHHHHHHHHHHHHCCS
T ss_pred cCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHHHHCCccccc
Confidence 5689999999999999999999999999999999997 4678899999999999999999875
No 24
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.68 E-value=1.5e-18 Score=144.23 Aligned_cols=86 Identities=21% Similarity=0.292 Sum_probs=70.0
Q ss_pred CcchhhhcCCCCCCCH--HHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCCCCCCCCcc
Q 017985 27 DTAYYDVLGVNVDASP--AEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGIPQDSMV 104 (363)
Q Consensus 27 ~~~~Y~iLgv~~~as~--~eIkkaYr~la~~~HPDk~~~~~~a~~~f~~i~~AY~vLsd~~~R~~YD~~g~~~~~~~~~~ 104 (363)
..+||+||||+++|+. .+||+|||+|+++||||++++ .++|++|++||+||+||.+|+.||.+|..-...
T Consensus 7 ~~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~----~e~f~~I~~AYevL~d~~~R~~~~~~~~~w~~~---- 78 (114)
T 1gh6_A 7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKMEDGVKYAHQPDFGGFWDAT---- 78 (114)
T ss_dssp HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT----TTTTHHHHHHHHHHHHHHHSCCSSCCSCCCCCC----
T ss_pred hhhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc----HHHHHHHHHHHHHHCCHHHHHHhhhcccccccc----
Confidence 3589999999999999 999999999999999999974 368999999999999999999999988521111
Q ss_pred chhhhhhhccccchHHHHHhH
Q 017985 105 DAAAVFGMIFGSEYFEDYIGQ 125 (363)
Q Consensus 105 d~~~~f~~~fg~~~f~~~~G~ 125 (363)
-...||...|.+|.+.
T Consensus 79 -----~~~~~g~p~w~~w~~~ 94 (114)
T 1gh6_A 79 -----EIPTYGTDEWEQWWNA 94 (114)
T ss_dssp -----CCCCCSSSCHHHHHHH
T ss_pred -----cCCCCCCchHHHHHhc
Confidence 0134566677777433
No 25
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.65 E-value=5.2e-17 Score=126.36 Aligned_cols=65 Identities=17% Similarity=0.255 Sum_probs=58.7
Q ss_pred cchhhhcCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCCC
Q 017985 28 TAYYDVLGVNVD--ASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEG 97 (363)
Q Consensus 28 ~~~Y~iLgv~~~--as~~eIkkaYr~la~~~HPDk~~~~~~a~~~f~~i~~AY~vLsd~~~R~~YD~~g~~~ 97 (363)
.++|+||||+++ ++..+||+|||+++++||||++++ .++|++|++||++|+||..|.. +.||.++
T Consensus 11 ~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~~----~~~f~~i~~AYe~L~~~~~r~~-~~~g~~~ 77 (79)
T 1faf_A 11 ERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGS----HALMQELNSLWGTFKTEVYNLR-MNLGGTG 77 (79)
T ss_dssp HHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCC----HHHHHHHHHHHHHHHHHHHHHT-TCCSSCC
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCC----HHHHHHHHHHHHHHhhHHHHHH-HhcCCcc
Confidence 479999999999 999999999999999999999863 4789999999999999999988 5577654
No 26
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.64 E-value=1.1e-17 Score=148.36 Aligned_cols=64 Identities=25% Similarity=0.379 Sum_probs=57.5
Q ss_pred cchhhhcCCCCCCC--HHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCC
Q 017985 28 TAYYDVLGVNVDAS--PAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGK 95 (363)
Q Consensus 28 ~~~Y~iLgv~~~as--~~eIkkaYr~la~~~HPDk~~~~~~a~~~f~~i~~AY~vLsd~~~R~~YD~~g~ 95 (363)
.+||++|||+++|+ .++||+|||++++++|||++++ .++|++|++||++|+||.+|+.||++|.
T Consensus 11 ~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~----~e~F~~I~~AYevLsdp~kR~~YD~~G~ 76 (174)
T 2pf4_E 11 LQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKMEDGVKYAHQPDFGG 76 (174)
T ss_dssp HHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---C----CTTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred ccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCC----HHHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence 68999999999998 6999999999999999999975 3689999999999999999999999996
No 27
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.62 E-value=1.1e-16 Score=127.00 Aligned_cols=61 Identities=23% Similarity=0.135 Sum_probs=56.4
Q ss_pred CcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh-HHHHHHHHHHHHHHHcCChhHH
Q 017985 27 DTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDP-KAAKNFQVLGEAYQVLSDPEKR 87 (363)
Q Consensus 27 ~~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~-~a~~~f~~i~~AY~vLsd~~~R 87 (363)
..++|+||||+++|+.++||+|||+|+++||||++++++ .+.++|+.|++||++|+|+..|
T Consensus 15 ~~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r 76 (88)
T 1iur_A 15 LKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFL 76 (88)
T ss_dssp HHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhccc
Confidence 358999999999999999999999999999999998764 4889999999999999998777
No 28
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.60 E-value=8.7e-17 Score=171.75 Aligned_cols=78 Identities=40% Similarity=0.689 Sum_probs=40.9
Q ss_pred cccCCcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCCCCCCC
Q 017985 23 AMVKDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGIPQ 100 (363)
Q Consensus 23 ~~~~~~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~~a~~~f~~i~~AY~vLsd~~~R~~YD~~g~~~~~~ 100 (363)
....+.|||++|||+++||.++||+|||+++++||||++++++.+.++|+.|++||++|+||.+|+.||++|..+...
T Consensus 16 ~~~~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~~~~~ 93 (780)
T 3apo_A 16 EGRHDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLED 93 (780)
T ss_dssp -------CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHHHHTTC-------
T ss_pred CCCCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHHHHHHhhccccccc
Confidence 445678999999999999999999999999999999999888889999999999999999999999999999876543
No 29
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=99.60 E-value=1.5e-15 Score=135.89 Aligned_cols=65 Identities=22% Similarity=0.445 Sum_probs=59.0
Q ss_pred CCcchhhhc------CCCC-CCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhc
Q 017985 26 KDTAYYDVL------GVNV-DASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKH 93 (363)
Q Consensus 26 ~~~~~Y~iL------gv~~-~as~~eIkkaYr~la~~~HPDk~~~~~~a~~~f~~i~~AY~vLsd~~~R~~YD~~ 93 (363)
...|||+|| |+++ +++..+||++||+|+++||||++++ +.++|+.|++||+||+||.+|..||..
T Consensus 9 ~~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~---a~~~f~~i~~AY~vL~dp~~R~~Yd~~ 80 (181)
T 3uo3_A 9 FTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQ---GSEQSSTLNQAYHTLKDPLRRSQYMLK 80 (181)
T ss_dssp CSCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCS---CSSGGGSHHHHHHHHHSHHHHHHHHHH
T ss_pred CCCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCcc---HHHHHHHHHHHHHHHcChHHHHHHHHH
Confidence 346999999 4665 8999999999999999999999985 667899999999999999999999984
No 30
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.59 E-value=2.2e-16 Score=126.08 Aligned_cols=56 Identities=27% Similarity=0.459 Sum_probs=51.6
Q ss_pred cchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh---HHHHHHHHHHHHHHHcCC
Q 017985 28 TAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDP---KAAKNFQVLGEAYQVLSD 83 (363)
Q Consensus 28 ~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~---~a~~~f~~i~~AY~vLsd 83 (363)
.++|++|||+++||.++||+|||+++++||||||++++ .|.++|+.|++||+||.+
T Consensus 33 ~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91 (92)
T ss_dssp CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence 47999999999999999999999999999999998765 378899999999999964
No 31
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.59 E-value=2e-16 Score=141.19 Aligned_cols=64 Identities=27% Similarity=0.492 Sum_probs=59.3
Q ss_pred CcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChH---HHHHHHHHHHHHHHcCChhHHHHH
Q 017985 27 DTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPK---AAKNFQVLGEAYQVLSDPEKREAY 90 (363)
Q Consensus 27 ~~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~~---a~~~f~~i~~AY~vLsd~~~R~~Y 90 (363)
..+||++|||+++|+..+||+|||+++++|||||+++.+. +.+.|+.|++||++|+||.+|..|
T Consensus 116 ~~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y 182 (182)
T 1n4c_A 116 GETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY 182 (182)
T ss_dssp TCCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred ccchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence 3689999999999999999999999999999999986553 789999999999999999999876
No 32
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.57 E-value=6.9e-16 Score=126.55 Aligned_cols=59 Identities=24% Similarity=0.349 Sum_probs=52.5
Q ss_pred CCcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---Ch----HHHHHHHHHHHHHHHcCChh
Q 017985 26 KDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPG---DP----KAAKNFQVLGEAYQVLSDPE 85 (363)
Q Consensus 26 ~~~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~---~~----~a~~~f~~i~~AY~vLsd~~ 85 (363)
.+.+||+|||+++ ||.++||+|||+++++|||||+++ ++ .|.++|+.|++||++|+||.
T Consensus 39 ~~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~ 104 (106)
T 3ag7_A 39 SGSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG 104 (106)
T ss_dssp TTSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred ccCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence 4579999999996 999999999999999999999863 22 36889999999999999985
No 33
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.51 E-value=3.9e-15 Score=113.37 Aligned_cols=57 Identities=16% Similarity=0.122 Sum_probs=51.2
Q ss_pred CcchhhhcCCCC-CCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHH
Q 017985 27 DTAYYDVLGVNV-DASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKR 87 (363)
Q Consensus 27 ~~~~Y~iLgv~~-~as~~eIkkaYr~la~~~HPDk~~~~~~a~~~f~~i~~AY~vLsd~~~R 87 (363)
..++|+||||++ +++.++||++||+|+++||||+++ + .+.|++|++||++|+|+..|
T Consensus 13 ~~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g-~---~~~f~~i~~Aye~L~~~~~r 70 (71)
T 2guz_A 13 SKEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGG-S---PFLATKINEAKDFLEKRGIS 70 (71)
T ss_dssp HHHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTC-C---HHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCC-C---HHHHHHHHHHHHHHhhhhhc
Confidence 458999999999 799999999999999999999974 3 35899999999999998655
No 34
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=98.90 E-value=6.7e-10 Score=107.53 Aligned_cols=66 Identities=42% Similarity=0.606 Sum_probs=56.1
Q ss_pred CcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh---HHHHHHHHHHHHHHHcCChhHHHHHhh
Q 017985 27 DTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDP---KAAKNFQVLGEAYQVLSDPEKREAYDK 92 (363)
Q Consensus 27 ~~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk~~~~~---~a~~~f~~i~~AY~vLsd~~~R~~YD~ 92 (363)
..++|.+||+.++++..+|+++|+++++++|||+.+.++ .+.+.|+.|++||++|+||++|..||.
T Consensus 381 ~~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~ 449 (450)
T 2y4t_A 381 KRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDD 449 (450)
T ss_dssp SCCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC-----
T ss_pred chhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhccC
Confidence 348999999999999999999999999999999997542 478899999999999999999999997
No 35
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.59 E-value=4.6e-08 Score=72.85 Aligned_cols=51 Identities=10% Similarity=0.019 Sum_probs=44.5
Q ss_pred chhhhcCCCCC---CCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCC
Q 017985 29 AYYDVLGVNVD---ASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSD 83 (363)
Q Consensus 29 ~~Y~iLgv~~~---as~~eIkkaYr~la~~~HPDk~~~~~~a~~~f~~i~~AY~vLsd 83 (363)
+-|.||||+++ ++.++|+++||+|....|||+.. + ......|++|+++|..
T Consensus 5 EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGG-S---~yl~~ki~~Ake~l~~ 58 (65)
T 2guz_B 5 ESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGG-S---FYLQSKVYRAAERLKW 58 (65)
T ss_dssp HHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTC-C---HHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCC-C---HHHHHHHHHHHHHHHH
Confidence 35889999999 99999999999999999999975 3 3567889999999864
No 36
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=83.47 E-value=0.56 Score=48.74 Aligned_cols=49 Identities=12% Similarity=0.194 Sum_probs=37.8
Q ss_pred ccCCcchhhhcCCCCCCCH--HHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHH
Q 017985 24 MVKDTAYYDVLGVNVDASP--AEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQV 80 (363)
Q Consensus 24 ~~~~~~~Y~iLgv~~~as~--~eIkkaYr~la~~~HPDk~~~~~~a~~~f~~i~~AY~v 80 (363)
.....+||.+||++.+... .+|+++||++++..+++ .+++..|..|+.|
T Consensus 625 ~~~~~~~~~~lG~~~~~~~lr~~~~~ayr~la~~~~~~--------~~r~~lvd~a~~v 675 (681)
T 2pzi_A 625 KDNKASTNHILGFPFTSHGLRLGVEASLRSLARVAPTQ--------RHRYTLVDMANKV 675 (681)
T ss_dssp TSCCCSSSEETTEESSHHHHHHHHHHHHHHHHHHCSSH--------HHHHHHHHHHHHH
T ss_pred HccCCCCcccCCCCCChHHHHHHHHHHHHHHHHhCCCh--------HHHHHHHHHhccc
Confidence 3445569999999776555 67999999999966544 3678889988876
No 37
>2qzg_A Conserved uncharacterized archaeal protein; unknown function protein, structu genomics, PSI-2, protein structure initiative; 2.09A {Methanococcus maripaludis S2} SCOP: a.29.14.1
Probab=32.23 E-value=19 Score=27.97 Aligned_cols=41 Identities=12% Similarity=0.278 Sum_probs=24.3
Q ss_pred HHHHhHHHHHHHHHHHH---HHhcCCCCCCHHHHHHHHHHHHHH
Q 017985 291 LWQINVVDIETTLSRVC---QAVLKDPSVSKETLKLRAKALKKL 331 (363)
Q Consensus 291 ~w~~~~~DIe~tlr~Vc---~kVL~D~~V~~~~R~~RA~aL~~L 331 (363)
++..-+.+-+.++++++ +.+.+|.+||.+.|+.=-++...|
T Consensus 4 ~~~~~~~e~e~~ik~~~~~L~~I~~D~sVPRNIRraA~ea~~~L 47 (94)
T 2qzg_A 4 MFSAKKLSPADKLKNISSMLEEIVEDTTVPRNIRAAADNAKNAL 47 (94)
T ss_dssp ---CCCCCHHHHHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHT
T ss_pred chhhhhcchHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHH
Confidence 33344444555555544 455678888888887776666555
No 38
>1ny9_A Transcriptional activator TIPA-S; all alpha, globin like; NMR {Streptomyces lividans} SCOP: a.181.1.1
Probab=27.08 E-value=1.1e+02 Score=24.67 Aligned_cols=53 Identities=21% Similarity=0.171 Sum_probs=29.2
Q ss_pred CCCCCCCH-HHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHcCChhHHHHHhhcCC
Q 017985 35 GVNVDASP-AEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGK 95 (363)
Q Consensus 35 gv~~~as~-~eIkkaYr~la~~~HPDk~~~~~~a~~~f~~i~~AY~vLsd~~~R~~YD~~g~ 95 (363)
|++|+... .+|-+.++.....+.++.. .+.|..|.+-| +.||.-+..||++|.
T Consensus 71 g~~p~s~eaq~l~~~h~~~l~~~~~~~s------~e~~~~L~~mY--v~D~rF~~~~d~~~~ 124 (143)
T 1ny9_A 71 GEPADSEGAMDAAEDHRQGIARNHYDCG------YEMHTCLGEMY--VSDERFTRNIDAAKP 124 (143)
T ss_dssp TCCTTCHHHHHHHHHHHHHHHHHSSCCC------HHHHHHHHHHT--TSTHHHHHHHGGGST
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhCCCCC------HHHHHHHHHHH--hcCHHHHHhHcccCh
Confidence 44454322 2344445554434344432 24566777776 378888888888753
No 39
>1ceu_A Protein (HIV-1 regulatory protein N-terminal domain VPR); helical domain, amphipaticity, viral protein; NMR {Synthetic} SCOP: j.11.1.1 PDB: 1fi0_A
Probab=26.90 E-value=81 Score=21.69 Aligned_cols=29 Identities=17% Similarity=0.233 Sum_probs=24.6
Q ss_pred hHHHHHHHHHHHHHhcCcchHHHHHHHHH
Q 017985 182 DEFVKWANAEARRLSGAAFGEAMLHTIGY 210 (363)
Q Consensus 182 ~~~~~~~~~Ea~~L~~~sfG~~iL~~IG~ 210 (363)
+.|...+..|++.=+.-.|...+|+.+|.
T Consensus 16 ~eW~le~LeElk~EAvrHFpr~~L~~lgq 44 (51)
T 1ceu_A 16 NDWTLELLEELKNEAVRHFPRIWLHSLGQ 44 (51)
T ss_dssp SHHHHHHHHHHHHHTTTSCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 46777777888888888999999999986
No 40
>3cjl_A Domain of unknown function; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Pectobacterium atrosepticum SCRI1043}
Probab=25.85 E-value=1.2e+02 Score=23.13 Aligned_cols=37 Identities=14% Similarity=0.171 Sum_probs=29.4
Q ss_pred HHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhchhc
Q 017985 305 RVCQAVLKDPSVSKETLKLRAKALKKLGTIFQGAKAA 341 (363)
Q Consensus 305 ~Vc~kVL~D~~V~~~~R~~RA~aL~~LG~if~~~~~~ 341 (363)
.+.++|=.+.+.+.++...=|-||+++|.+|.+-...
T Consensus 32 ~Ive~~~~~~~~~~~~a~af~vGLKLfgevml~~r~~ 68 (88)
T 3cjl_A 32 KLLEKVDGKMDMTPEQTQAFMVGLKLFGEVMMQQRKH 68 (88)
T ss_dssp HHHHHHTTTSSSCHHHHHHHHHHHHHHHHHHHHTTTS
T ss_pred HHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCcCC
Confidence 3445555667789999999999999999999876543
No 41
>2cqn_A Formin-binding protein 3; FF domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.159.2.1
Probab=25.17 E-value=1.4e+02 Score=21.92 Aligned_cols=53 Identities=9% Similarity=0.135 Sum_probs=36.6
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCCCCh--HHHHHHHHHHHHHHHcCCh-hHHHHHhhc
Q 017985 40 ASPAEIKKAYYLKARIVHPDKNPGDP--KAAKNFQVLGEAYQVLSDP-EKREAYDKH 93 (363)
Q Consensus 40 as~~eIkkaYr~la~~~HPDk~~~~~--~a~~~f~~i~~AY~vLsd~-~~R~~YD~~ 93 (363)
.-...++.+|+.+.+...|...+... .+...|..-. +|..+.++ .++..|+.|
T Consensus 6 ~r~rrl~~~F~~mLk~~~p~I~~~s~We~vr~~~e~~~-~fkav~~E~eR~~lFeeY 61 (77)
T 2cqn_A 6 SGMKRKESAFKSMLKQAAPPIELDAVWEDIRERFVKEP-AFEDITLESERKRIFKDF 61 (77)
T ss_dssp CSHHHHHHHHHHHHHTCSSCCCTTCCHHHHHHHHTTSH-HHHTCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHccCH-HHHhcCCHHHHHHHHHHH
Confidence 34567889999998888787766442 3444454444 89999764 677777766
No 42
>2qsb_A UPF0147 protein TA0600; structural genomics, four-helix bundle, PSI-2, protein structure initiative; HET: MSE; 1.30A {Thermoplasma acidophilum dsm 1728} SCOP: a.29.14.1
Probab=20.28 E-value=1.8e+02 Score=22.22 Aligned_cols=26 Identities=23% Similarity=0.286 Sum_probs=19.6
Q ss_pred HHHHhcCCCCCCHHHHHHHHHHHHHH
Q 017985 306 VCQAVLKDPSVSKETLKLRAKALKKL 331 (363)
Q Consensus 306 Vc~kVL~D~~V~~~~R~~RA~aL~~L 331 (363)
+-+.+.+|.+||.+.|+.=.++...|
T Consensus 18 ~L~~I~~D~sVPRNIRraA~ea~~~L 43 (89)
T 2qsb_A 18 LLDELSQDITVPKNVRKVAQDSKAKL 43 (89)
T ss_dssp HHHHHHTCTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCCChHHHHHHHHHHHHH
Confidence 45667788888888888777776665
No 43
>1qqr_A Streptokinase domain B; non-proteolytic, plasminogen activation, fibrinolysis, hydrolase activator; 2.30A {Streptococcus dysgalactiae subsp} SCOP: d.15.5.1 PDB: 1c4p_A
Probab=20.27 E-value=62 Score=26.81 Aligned_cols=34 Identities=15% Similarity=0.067 Sum_probs=29.8
Q ss_pred CcchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCC
Q 017985 27 DTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDK 60 (363)
Q Consensus 27 ~~~~Y~iLgv~~~as~~eIkkaYr~la~~~HPDk 60 (363)
.+-++..|.|....+.+|++++=..+..++|||=
T Consensus 31 ~~~~l~~k~ig~~Its~eL~~~AqeiL~q~hp~Y 64 (138)
T 1qqr_A 31 LTKLLKTLAIGDTITSQELLAQAQSILNKNHPGY 64 (138)
T ss_dssp CCEEEEEECTTCEEEHHHHHHHHHHHHHHHSTTE
T ss_pred hhhhhcccccCcccCHHHHHHHHHHHHHhcCCCc
Confidence 3456888889999999999999999999999983
Done!