Query 017989
Match_columns 362
No_of_seqs 172 out of 1614
Neff 8.0
Searched_HMMs 46136
Date Fri Mar 29 05:11:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017989.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017989hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR00378 cax calcium/proton e 100.0 1.1E-57 2.4E-62 439.8 37.4 331 1-335 16-349 (349)
2 KOG1397 Ca2+/H+ antiporter VCX 100.0 2.1E-57 4.5E-62 422.5 28.6 340 1-342 93-441 (441)
3 TIGR00846 caca2 calcium/proton 100.0 2.7E-55 5.9E-60 425.0 36.9 330 1-335 34-365 (365)
4 COG0387 ChaA Ca2+/H+ antiporte 100.0 8.9E-50 1.9E-54 374.7 36.2 331 1-338 33-368 (368)
5 PRK10734 putative calcium/sodi 100.0 1.1E-46 2.4E-51 359.3 31.6 313 3-339 4-321 (325)
6 COG0530 ECM27 Ca2+/Na+ antipor 100.0 4E-44 8.7E-49 339.5 27.1 303 3-336 11-319 (320)
7 TIGR00367 K+-dependent Na+/Ca+ 100.0 3.4E-43 7.3E-48 334.1 29.6 300 4-330 4-307 (307)
8 PRK10599 calcium/sodium:proton 100.0 8.4E-42 1.8E-46 325.3 33.5 317 7-335 43-365 (366)
9 TIGR00927 2A1904 K+-dependent 100.0 1.1E-32 2.4E-37 281.7 21.9 146 193-338 935-1086(1096)
10 KOG1307 K+-dependent Ca2+/Na+ 100.0 3.8E-33 8.1E-38 264.7 15.6 312 9-340 68-580 (588)
11 PLN03151 cation/calcium exchan 100.0 9.9E-26 2.2E-30 230.5 29.9 307 14-338 155-640 (650)
12 PRK10734 putative calcium/sodi 99.9 7.7E-22 1.7E-26 188.6 15.1 144 192-338 4-147 (325)
13 TIGR00367 K+-dependent Na+/Ca+ 99.8 3.4E-20 7.4E-25 176.5 15.0 142 193-339 4-147 (307)
14 COG0530 ECM27 Ca2+/Na+ antipor 99.8 3.3E-20 7.2E-25 176.3 14.1 154 188-344 7-160 (320)
15 TIGR00927 2A1904 K+-dependent 99.8 7.1E-19 1.5E-23 181.0 15.1 135 201-338 470-606 (1096)
16 KOG2399 K+-dependent Na+:Ca2+ 99.8 5.4E-18 1.2E-22 171.2 17.6 302 12-333 117-596 (605)
17 PF01699 Na_Ca_ex: Sodium/calc 99.8 3.5E-18 7.5E-23 143.9 11.7 132 202-333 2-139 (140)
18 PLN03151 cation/calcium exchan 99.7 2E-16 4.3E-21 162.4 12.2 131 203-335 155-288 (650)
19 TIGR00846 caca2 calcium/proton 99.7 1.6E-15 3.4E-20 147.5 15.0 142 194-339 38-193 (365)
20 TIGR00378 cax calcium/proton e 99.6 1.9E-15 4E-20 146.3 14.3 141 194-337 20-174 (349)
21 TIGR00845 caca sodium/calcium 99.6 1.6E-15 3.5E-20 158.6 14.0 147 189-335 752-918 (928)
22 KOG1307 K+-dependent Ca2+/Na+ 99.6 1.7E-15 3.6E-20 145.0 5.7 130 202-334 71-202 (588)
23 PF01699 Na_Ca_ex: Sodium/calc 99.5 5.7E-14 1.2E-18 118.2 9.3 136 12-159 1-139 (140)
24 TIGR00845 caca sodium/calcium 99.4 7.7E-13 1.7E-17 138.8 9.7 90 2-91 754-847 (928)
25 KOG2399 K+-dependent Na+:Ca2+ 98.9 1.2E-09 2.5E-14 111.2 5.2 128 203-333 119-248 (605)
26 KOG1306 Ca2+/Na+ exchanger NCX 98.9 3.3E-10 7.2E-15 109.8 0.8 159 1-161 425-589 (596)
27 KOG1306 Ca2+/Na+ exchanger NCX 98.7 1.6E-08 3.4E-13 98.4 6.4 142 193-334 428-588 (596)
28 PRK10599 calcium/sodium:proton 98.7 4.4E-07 9.6E-12 87.5 14.7 137 6-160 226-364 (366)
29 COG0387 ChaA Ca2+/H+ antiporte 98.3 2.1E-05 4.5E-10 75.4 14.7 137 5-159 224-363 (368)
30 KOG1397 Ca2+/H+ antiporter VCX 98.1 8.4E-05 1.8E-09 71.1 14.8 137 196-337 99-256 (441)
31 PRK11588 hypothetical protein; 36.2 5E+02 0.011 26.7 13.1 29 5-33 116-144 (506)
32 PF03606 DcuC: C4-dicarboxylat 35.4 2.7E+02 0.006 28.1 9.7 15 192-206 256-270 (465)
33 PF03616 Glt_symporter: Sodium 33.0 4.8E+02 0.01 25.5 10.9 13 318-330 335-347 (368)
34 PLN00082 photosystem II reacti 32.1 65 0.0014 23.1 3.1 31 318-348 33-63 (67)
35 PRK10921 twin-arginine protein 29.0 4.7E+02 0.01 24.2 14.0 41 317-357 216-256 (258)
36 PF12263 DUF3611: Protein of u 27.7 4.2E+02 0.0092 23.3 8.8 37 189-227 104-140 (183)
37 PF08370 PDR_assoc: Plant PDR 27.4 89 0.0019 22.6 3.3 25 62-86 29-54 (65)
38 PLN00077 photosystem II reacti 25.4 89 0.0019 25.3 3.2 31 317-347 93-123 (128)
39 PF07123 PsbW: Photosystem II 25.4 97 0.0021 25.8 3.5 27 316-342 103-129 (138)
40 PF05684 DUF819: Protein of un 23.3 2.6E+02 0.0056 27.6 6.8 53 191-243 206-259 (378)
41 PF05915 DUF872: Eukaryotic pr 22.1 2.5E+02 0.0054 22.7 5.4 60 190-255 41-106 (115)
42 COG2814 AraJ Arabinose efflux 21.7 4.3E+02 0.0093 26.3 8.0 66 188-253 10-77 (394)
43 COG4736 CcoQ Cbb3-type cytochr 21.4 61 0.0013 23.0 1.5 20 323-342 18-37 (60)
No 1
>TIGR00378 cax calcium/proton exchanger (cax).
Probab=100.00 E-value=1.1e-57 Score=439.77 Aligned_cols=331 Identities=41% Similarity=0.677 Sum_probs=292.0
Q ss_pred CCcchhHHHHHHHHHHhHHHHHHHHHHHHHHhCChhHHHHHHHhhhHHHHHHHHHHhhCCcchhHHHHhHHHHHHHHHHH
Q 017989 1 MMQPWVFALSLLGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALYGRKIDVVKYSLLGSILSNLLLV 80 (362)
Q Consensus 1 ~~~~~~F~~~~~~i~~~a~~~~~~~e~l~~~~g~~~~g~~~~a~gs~pEl~v~i~a~~~g~~~ia~g~iiGS~i~nllli 80 (362)
|++.++|++|.++++|+++++++++|++++|+|+.++|++++++||+||+++++.|+.+|++|+++||++|||++|++++
T Consensus 16 ~~~~~~F~~~~~aiipla~~l~~~~~~lA~~~g~~vggl~~~~~gt~pEL~vsi~A~~~g~~~i~~gnivGS~i~NllLi 95 (349)
T TIGR00378 16 WSHTLTFLFNFLAIIPLAAIMGNATEELADKAGPTIGGLLNATFGNAVELIVSIIALKEGLVRIVQASLTGSLLGNLLLV 95 (349)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHhhccHHHHHHHHHHHHcCChhhhHHHHHHHHHHhHHHH
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccccCcceeeechhhhhHHHHHHHHHHHHHHHHHHhhhhhccccchhhhhhHHHHHHHHHHHHHHHHHHHhh
Q 017989 81 LGTSLFCGGIANLRKEQKYDRKQADVNSLLLLLALLCHMLPLLFKYAAASSDITAKATLQLSRASSIVMLIGYFAYLVFQ 160 (362)
Q Consensus 81 lGl~~l~~~~~~~~~~~~~~~~~~~~~~~ll~is~l~l~lp~~~~~~~~~~~~~~~~~~~is~~~~~ill~~Y~~yl~~~ 160 (362)
+|+|++++++| +++|.++++.++.+..+++++++.+++|..+....... ..+....++|.+|++++.+|+.|++|+
T Consensus 96 lGls~liggl~--~~~q~~~~~~a~~~~~ll~la~~~l~lp~~~~~~~~~~--~~~~~~~ls~~~aiill~lY~~~L~~~ 171 (349)
T TIGR00378 96 LGLCFFFGGLN--YKQQTFNQTAARTNSSLLAIACVALLIPAARATLSHGK--EDGKILNLSRGTSIVIIIVYVLFLYFQ 171 (349)
T ss_pred HHHHHHHhccc--cceeecCHHHHHHHHHHHHHHHHHHHhhhHHHhcCCCc--cchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999987 47888888888877888888888888997753221100 011235799999999999999999999
Q ss_pred cccccccccccCCCCCC-CCC--CCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcchhhhhhhhccc
Q 017989 161 LWTHREFFEAQEDSEDD-DDV--TEETPVIGFWSGFAWLVGMTAIIALLSEFVVGTIEDASNSWGISVSFISIILLPIVG 237 (362)
Q Consensus 161 ~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~l~~~~~~i~~~a~~lv~~~~~i~~~~gi~~~~iG~~l~al~t 237 (362)
+++||+.|+++++++++ +++ ++++++++.++.+.+++++++++..++++++++++.+++.+|+|+.++|++++|++|
T Consensus 172 l~~h~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~v~i~~~a~~lv~~~~~~~~~~gi~~~~igl~iva~~t 251 (349)
T TIGR00378 172 LGTHHALYEQQEAETDEVMETIERNPHHSLSVKSSTVVLLGTTVIVAFCSEFLVGTIDNVVESTGLSKLFIGVIVIPIVG 251 (349)
T ss_pred hhhHHHHhCCcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhc
Confidence 99999888653222111 111 112234667788888899999999999999999999999999999999999999999
Q ss_pred cchhHHHHHHHHHhCCcchhHHHhhhHHHHHHHHHHHHHHHHHHhcCcceeeccchhHHHHHHHHHHHHHHHhcCCeehH
Q 017989 238 NAAEHAGAIIFAFKNKLDISLGVALGSATQIAVFVVPLCVIISWIMGITMDLNFNLLETGSLALAIIATAFTLQDGTSHY 317 (362)
Q Consensus 238 slPE~~~ai~aa~~g~~~~aig~~iGs~i~~~ll~lg~~~l~~~~~~~~~~l~~~~~~~~~l~~s~l~~~~~~~~~~~~~ 317 (362)
|+||.++++.+++||+.|+++||++|||++|.++++|+..+++|..++|+++.++.++..++++++++..+..+|||.||
T Consensus 252 slpE~~~ai~aa~~~~~~~ai~~~~GS~i~~~l~v~p~lvl~~~~~~~~~~L~f~~~~~~~l~~~v~~~~~~~~dg~~n~ 331 (349)
T TIGR00378 252 NAAEHATAVLVAMKDKMDLALGVAIGSSLQIALFVAPVLVIVGWMIDVPMTLNFSTFELVALFIAVLLSNYISLDGESNW 331 (349)
T ss_pred ccHHHHHHHHHHHcCCcccHHHHHHhHHHHHHHHHHHHHHHHHHHhCCCceecCcHHHHHHHHHHHHHHHHHHhCCCCcH
Confidence 99999999999999999999999999999999999999999999999999999999999888888888888899999999
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 017989 318 MKGFVLLLCYFVIGACFF 335 (362)
Q Consensus 318 ~~g~~ll~~Y~~y~~~~~ 335 (362)
.||.+++++|+++.+.+|
T Consensus 332 leG~~ll~~Y~i~~~~f~ 349 (349)
T TIGR00378 332 LEGVMLLAMYIIIAMAFF 349 (349)
T ss_pred HHHHHHHHHHHHHHHHhC
Confidence 999999999999988764
No 2
>KOG1397 consensus Ca2+/H+ antiporter VCX1 and related proteins [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.1e-57 Score=422.47 Aligned_cols=340 Identities=60% Similarity=0.966 Sum_probs=311.4
Q ss_pred CCcchhHHHHHHHHHHhHHHHHHHHHHHHHHhCChhHHHHHHHhhhHHHHHHHHHHhhCCcchhHHHHhHHHHHHHHHHH
Q 017989 1 MMQPWVFALSLLGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALYGRKIDVVKYSLLGSILSNLLLV 80 (362)
Q Consensus 1 ~~~~~~F~~~~~~i~~~a~~~~~~~e~l~~~~g~~~~g~~~~a~gs~pEl~v~i~a~~~g~~~ia~g~iiGS~i~nllli 80 (362)
|+..++|.++++++.|+|++++.++|+++.+.||++||++++++||..|+++++.|+.+|+..+++++++||++.|++++
T Consensus 93 ~s~~~vF~lsll~iiPLA~~l~~ateqls~~tg~tvGgllNAtfGnaiElii~ilALk~g~~riVq~SlLGSILsnlLLv 172 (441)
T KOG1397|consen 93 WSKGWVFLLSLLGIIPLAERLGFATEQLSAYTGPTVGGLLNATFGNAIELIIYILALKNGKVRIVQGSLLGSILSNLLLV 172 (441)
T ss_pred ccchHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcHHHHHhhhhccHHHHHHHHHHhhcCceEEEehhhHHHHHHHHHHH
Confidence 34678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccccCcceeeechhhhhHHHHHHHHHHHHHHHHHHhhhhhcccc---chhhhhhHHHHHHHHHHHHHHHHHH
Q 017989 81 LGTSLFCGGIANLRKEQKYDRKQADVNSLLLLLALLCHMLPLLFKYAAASSD---ITAKATLQLSRASSIVMLIGYFAYL 157 (362)
Q Consensus 81 lGl~~l~~~~~~~~~~~~~~~~~~~~~~~ll~is~l~l~lp~~~~~~~~~~~---~~~~~~~~is~~~~~ill~~Y~~yl 157 (362)
+|+|++.||++ |++|+||++.++..+.++.+++++.++|+++.++..+.. ...+....+||..+++++..|+.|+
T Consensus 173 lG~s~~~Ggi~--rk~Q~Fn~~~A~v~s~lLl~a~l~~l~P~~l~~~~~~~~~~~~~~~~~l~lSr~~SivmliaYi~~L 250 (441)
T KOG1397|consen 173 LGLSLFCGGIR--RKDQRFNIKSAGVNSALLLLAVLGILLPTVLHYTYGGEVHDCSSGGAILPLSRGCSIVMLIAYIAYL 250 (441)
T ss_pred hhHHHhhcccc--cceeecccchhhHHHHHHHHHHHHHHHHHHHHHhcCccccccCCccceeeehhccHHHHHHHHHHHH
Confidence 99999999998 799999999999999999999999999999998853211 1222356889999999999999999
Q ss_pred Hhhccccccc--ccccCCCC--CCCC--CCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcchhhhh
Q 017989 158 VFQLWTHREF--FEAQEDSE--DDDD--VTEETPVIGFWSGFAWLVGMTAIIALLSEFVVGTIEDASNSWGISVSFISII 231 (362)
Q Consensus 158 ~~~~~~~~~~--~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~l~~~~~~i~~~a~~lv~~~~~i~~~~gi~~~~iG~~ 231 (362)
|||+|+||+. +..++|+| .|++ +++|.|+++.|+.+.+++..++++.+.|+++|+++|...+.+|+|++|+|++
T Consensus 251 ~FqL~t~~h~~~~~~~~ee~~~~d~~~s~~~e~p~is~~ss~~~L~~~T~~vsllaeyLV~~Id~~~ds~~ls~~Figli 330 (441)
T KOG1397|consen 251 WFQLKTARHIWQFPTPDEEETEQDDEVSNEDEAPNISRWSSIIWLLIMTLLVSLLAEYLVDTIDDVSDSWGLSVKFIGLI 330 (441)
T ss_pred HHhhhcccccCCCCCCChhcccccccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhheee
Confidence 9999996643 33222222 1222 2567789999999999999999999999999999999999999999999999
Q ss_pred hhhccccchhHHHHHHHHHhCCcchhHHHhhhHHHHHHHHHHHHHHHHHHhcCcceeeccchhHHHHHHHHHHHHHHHhc
Q 017989 232 LLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQIAVFVVPLCVIISWIMGITMDLNFNLLETGSLALAIIATAFTLQ 311 (362)
Q Consensus 232 l~al~tslPE~~~ai~aa~~g~~~~aig~~iGs~i~~~ll~lg~~~l~~~~~~~~~~l~~~~~~~~~l~~s~l~~~~~~~ 311 (362)
++|+..+..|++.|+..|.|||.|+++|..+||++|..++.+|..++.+|..|++|++.|+.+|+..+++++++..+++.
T Consensus 331 llpiVgNaaEh~~AI~fA~k~kldLslgVaigsalQI~Lf~vP~~v~v~W~~g~~M~LnF~~~et~~l~isVfl~~y~lq 410 (441)
T KOG1397|consen 331 LLPIVGNAAEHAGAISFAMKDKLDLSLGVAIGSALQIALFVVPFSVIVGWIMGISMDLNFPLLETACLFISVFLVAYLLQ 410 (441)
T ss_pred eecccCchHHhhcceeeeecCcccchhhhhhhhhHhHHHhhhhHHHHhhhhcCCceEEeccHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeehHHHHHHHHHHHHHHHHHHHHcCCCCC
Q 017989 312 DGTSHYMKGFVLLLCYFVIGACFFVSNRPLD 342 (362)
Q Consensus 312 ~~~~~~~~g~~ll~~Y~~y~~~~~~~~~~~~ 342 (362)
||+.||++|.+++.+|++.+.++|+++.|++
T Consensus 411 dG~Sny~kG~mLll~Y~Iia~~Ff~~~~~~~ 441 (441)
T KOG1397|consen 411 DGKSNYFKGLMLLLCYLIIAAGFFVYNDPSQ 441 (441)
T ss_pred cCchhHHHHHHHHHHHHHHHHHhhccCCCCC
Confidence 9999999999999999999999999988753
No 3
>TIGR00846 caca2 calcium/proton exchanger. This model is generated from the calcium ion/proton exchangers of the CacA family.
Probab=100.00 E-value=2.7e-55 Score=424.97 Aligned_cols=330 Identities=61% Similarity=0.923 Sum_probs=283.1
Q ss_pred CCcchhHHHHHHHHHHhHHHHHHHHHHHHHHhCChhHHHHHHHhhhHHHHHHHHHHhhCCcchhHHHHhHHHHHHHHHHH
Q 017989 1 MMQPWVFALSLLGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALYGRKIDVVKYSLLGSILSNLLLV 80 (362)
Q Consensus 1 ~~~~~~F~~~~~~i~~~a~~~~~~~e~l~~~~g~~~~g~~~~a~gs~pEl~v~i~a~~~g~~~ia~g~iiGS~i~nllli 80 (362)
|++.++|++++++++++++++++++|++++|+|..+||++++..+|+||+++++.|+.+|++++++||++|||++|++++
T Consensus 34 ~~~~~~F~~~~~~li~~a~~lv~~a~~lA~~~G~~vG~ll~a~~ts~pEL~vsi~A~~~g~~~la~gnivGS~i~NilLI 113 (365)
T TIGR00846 34 WSQTVIFLLNLLGIIPLAERVSFATEQLAHRLGPTLGGLLNATFGNAVELIISLMALGEGKVEVVRASLLGSILSNLLLV 113 (365)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhhHHHHHHhHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999987999988666699999999999999999999999999999999999
Q ss_pred HHHHHhhcccccCcceeeechhhhhHHHHHHHHHHHHHHHHHHhhhhhccccchhhhhhHHHHHHHHHHHHHHHHHHHhh
Q 017989 81 LGTSLFCGGIANLRKEQKYDRKQADVNSLLLLLALLCHMLPLLFKYAAASSDITAKATLQLSRASSIVMLIGYFAYLVFQ 160 (362)
Q Consensus 81 lGl~~l~~~~~~~~~~~~~~~~~~~~~~~ll~is~l~l~lp~~~~~~~~~~~~~~~~~~~is~~~~~ill~~Y~~yl~~~ 160 (362)
+|+|+++++.|. +++|+++++..+....++.++++.+++|..+..+... .|....++|.+|++++.+|++|++|+
T Consensus 114 lGl~~l~~~~~~-~~~~~~~~~~~~~~~~ll~~~~~~l~lp~~~~~~~~~----~~~~~~ls~~~giill~ly~~yl~~~ 188 (365)
T TIGR00846 114 LGLSLFLGGIKN-IREQRFNRGAAQVNSALLLLAILSLVLPLALPAGKPG----QDSILGLSRGIAIVMLILYGAFLVFQ 188 (365)
T ss_pred HHHHHHHhccCc-cceeeccHHHHHHHHHHHHHHHHHHHhhhHHhhcCCC----cchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999987762 1356678877666667777888888888765432110 11224689999999999999999999
Q ss_pred cccccccccccCCCC-CCCCCCCCCC-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcchhhhhhhhcccc
Q 017989 161 LWTHREFFEAQEDSE-DDDDVTEETP-VIGFWSGFAWLVGMTAIIALLSEFVVGTIEDASNSWGISVSFISIILLPIVGN 238 (362)
Q Consensus 161 ~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~l~~~~~~i~~~a~~lv~~~~~i~~~~gi~~~~iG~~l~al~ts 238 (362)
+++||+.|+++++++ ++++++++++ +++.++++..++++++++..++++++++++.+++.+|+|+.++|++++|++||
T Consensus 189 ~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~l~~~a~~lv~~~~~ia~~~gis~~~iGl~lvai~ts 268 (365)
T TIGR00846 189 LVTHRQLFEPQEEADSDYDDEVHEEPTVISPWSAAAWLVGATIVVALLAEYLVDTIESAVESWGLSVAFIGVILAPIVGN 268 (365)
T ss_pred hccchhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhcc
Confidence 999998775432221 1111222233 46778899999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHHHHHhCCcchhHHHhhhHHHHHHHHHHHHHHHHHHhcCcceeeccchhHHHHHHHHHHHHHHHhcCCeehHH
Q 017989 239 AAEHAGAIIFAFKNKLDISLGVALGSATQIAVFVVPLCVIISWIMGITMDLNFNLLETGSLALAIIATAFTLQDGTSHYM 318 (362)
Q Consensus 239 lPE~~~ai~aa~~g~~~~aig~~iGs~i~~~ll~lg~~~l~~~~~~~~~~l~~~~~~~~~l~~s~l~~~~~~~~~~~~~~ 318 (362)
+||.++++.++++|+.|+++||++|||++|+++++|+..+++|..+.|+++.++.++..++++++++..+...|+|++|+
T Consensus 269 lpE~~~si~aa~~g~~~lavg~~iGSni~n~l~vl~~~~li~~~~~~~~~l~~~~~~~~~l~~s~~~~~~~~~~~~~~~~ 348 (365)
T TIGR00846 269 AAEHAGAVIAAFKNKLDIALGVALGSALQIALFVVPVVVLVAWMLGIPMDLNFGAPETVALALSVFLTTITLQDGRSNYL 348 (365)
T ss_pred cHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceeccCcHHHHHHHHHHHHHHHHHHcCCcCcHH
Confidence 99999999999999999999999999999999999999999998788888888888887888888777777789999999
Q ss_pred HHHHHHHHHHHHHHHHH
Q 017989 319 KGFVLLLCYFVIGACFF 335 (362)
Q Consensus 319 ~g~~ll~~Y~~y~~~~~ 335 (362)
||.+++.+|++|...+|
T Consensus 349 eG~~ll~~Y~~~~~~~~ 365 (365)
T TIGR00846 349 EGAVLLALYIIIAMLFF 365 (365)
T ss_pred HHHHHHHHHHHHHHHhC
Confidence 99999999999988654
No 4
>COG0387 ChaA Ca2+/H+ antiporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.9e-50 Score=374.71 Aligned_cols=331 Identities=33% Similarity=0.503 Sum_probs=304.1
Q ss_pred CCcchhHHHHHHHHHHhHHHHHHHHHHHHHHhCChhHHHHHHHhhhHHHHHHHHHHhhCCcchhHHHHhHHHHHHHHHHH
Q 017989 1 MMQPWVFALSLLGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELIIAIFALYGRKIDVVKYSLLGSILSNLLLV 80 (362)
Q Consensus 1 ~~~~~~F~~~~~~i~~~a~~~~~~~e~l~~~~g~~~~g~~~~a~gs~pEl~v~i~a~~~g~~~ia~g~iiGS~i~nllli 80 (362)
+++...|+.+++++.|++.++.+++|++++|.||.+||++++.+|+..|+++...+..+|++.++++++.||++.|++++
T Consensus 33 ~~~~~~fi~~~l~i~plA~~v~~aaE~lA~~vG~~~G~Lina~f~~~iEvil~~~al~~G~~~lvr~Si~gsIm~~~llv 112 (368)
T COG0387 33 TGPVVIFIAALLAIIPLAFSVVRAAEVLAARVGEPYGSLINALFGNAIEVILIVAALKSGSPTLVRDSLYGSIMINLLLV 112 (368)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHH
Confidence 35778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccccCcceeeechhhhhHHHHHHHHH-HHHHHHHHHhhhhhccccchhhhhhHHHHHHHHHHHHHHHHHHHh
Q 017989 81 LGTSLFCGGIANLRKEQKYDRKQADVNSLLLLLA-LLCHMLPLLFKYAAASSDITAKATLQLSRASSIVMLIGYFAYLVF 159 (362)
Q Consensus 81 lGl~~l~~~~~~~~~~~~~~~~~~~~~~~ll~is-~l~l~lp~~~~~~~~~~~~~~~~~~~is~~~~~ill~~Y~~yl~~ 159 (362)
+|+|++.||+| |++|++|...++.|..++..+ ++.+++|+++.++.. .. .....|...+++++++|..+++|
T Consensus 113 ~GlslllGglr--~~~Q~fN~~~a~~~~~~L~~~~~ialv~P~~~~~~~~-~~----~~~~~s~~~avv~i~~Y~lfL~f 185 (368)
T COG0387 113 VGLSLLLGGLR--HKTQPFNPHGAGTYLALLFTAATIALVLPTFFPYTGG-GN----FSLGQSLFVAVVLIALYGLFLFF 185 (368)
T ss_pred HHHHHHHcchh--hceeecchhhHHHHHHHHHHHHHHHhhhhhhhcccCC-Cc----chHhHHHHHHHHHHHHHHHHHHh
Confidence 99999999998 599999999999998887777 889999999876642 11 22578899999999999999999
Q ss_pred hcccccccccccCCCC----CCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcchhhhhhhhc
Q 017989 160 QLWTHREFFEAQEDSE----DDDDVTEETPVIGFWSGFAWLVGMTAIIALLSEFVVGTIEDASNSWGISVSFISIILLPI 235 (362)
Q Consensus 160 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~a~~lv~~~~~i~~~~gi~~~~iG~~l~al 235 (362)
|+++|++.|.+++++| +++++.+++++|+.++...+++++++.+...+|.++.++|...+.+|.|+.|+|+++.++
T Consensus 186 ql~tH~~~f~~~~~~e~~~ee~~~h~~~~~~~s~~~s~~vLl~~tv~v~~lae~lv~~le~~l~~~g~~~~F~G~iIa~l 265 (368)
T COG0387 186 QLKTHASLFWQVHEAEGEAEEDDPHHDDPSKWSVLLSTGVLLIATVLVALLAEILVGSLEAVLESLGAPPAFVGLIIAAL 265 (368)
T ss_pred hhhhhhhhhcccccccccCCCCCCCCCCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Confidence 9999999987654432 111223456789999999999999999999999999999999999999999999999999
Q ss_pred cccchhHHHHHHHHHhCCcchhHHHhhhHHHHHHHHHHHHHHHHHHhcCcceeeccchhHHHHHHHHHHHHHHHhcCCee
Q 017989 236 VGNAAEHAGAIIFAFKNKLDISLGVALGSATQIAVFVVPLCVIISWIMGITMDLNFNLLETGSLALAIIATAFTLQDGTS 315 (362)
Q Consensus 236 ~tslPE~~~ai~aa~~g~~~~aig~~iGs~i~~~ll~lg~~~l~~~~~~~~~~l~~~~~~~~~l~~s~l~~~~~~~~~~~ 315 (362)
..+.||.+++++++++||+|.+++..+||.++.+++.+|.+.+.+|+.|+|+.+.+.+.|+.+++.++++..+...|||.
T Consensus 266 Vgn~~E~~tAi~aA~~~~mqls~nia~Gsalq~~lltiP~lvlis~~~gqpm~l~~~~~elV~l~~~v~~~~~~~sdG~s 345 (368)
T COG0387 266 VGNAPEHLTALRAALNNRMQLSMNIAMGSALQTALLTIPVLVLISLFTGQPLTLGFGPPELVLLVVTVFLANILFSDGRT 345 (368)
T ss_pred hccCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccCCHHHHHHHHHHHHHHHHhcCCCch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHcC
Q 017989 316 HYMKGFVLLLCYFVIGACFFVSN 338 (362)
Q Consensus 316 ~~~~g~~ll~~Y~~y~~~~~~~~ 338 (362)
||+||.+++++|++|+..+|+.+
T Consensus 346 n~leG~~lL~lya~~~~~ff~~~ 368 (368)
T COG0387 346 NWLEGVVLLALYAIYAMLFFFPP 368 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999887653
No 5
>PRK10734 putative calcium/sodium:proton antiporter; Provisional
Probab=100.00 E-value=1.1e-46 Score=359.28 Aligned_cols=313 Identities=24% Similarity=0.236 Sum_probs=240.0
Q ss_pred cchhHHHHHHHHHHhHHHHHHHHHHHHHHhC--ChhHHHHHHHhh-hHHHHHHHHHHhhCCcchhHHHHhHHHHHHHHHH
Q 017989 3 QPWVFALSLLGLTPLAERVSFLTEQIAFYTG--PTVGGLLNATCG-NATELIIAIFALYGRKIDVVKYSLLGSILSNLLL 79 (362)
Q Consensus 3 ~~~~F~~~~~~i~~~a~~~~~~~e~l~~~~g--~~~~g~~~~a~g-s~pEl~v~i~a~~~g~~~ia~g~iiGS~i~nlll 79 (362)
+...++++++.+++++++++++++++++++| +.+.|++++++| |+||+++++.|+.+|++|+++||++|||++|+++
T Consensus 4 ~~~~~~~gl~~l~~ga~~lv~~~~~ia~~lgis~~viG~tiva~gTSlPEl~vsv~A~~~g~~~ia~GnilGSni~ni~l 83 (325)
T PRK10734 4 ATALLIIGLLLLVYGADRLVFAASILCRTFGIPPLIIGMTVVGIGTSLPEIIVSVAASLHGQRDLAVGTALGSNITNILL 83 (325)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHcchhHHHHHHHHHHcCCCcchhhhhhhHHHHHHHH
Confidence 3567889999999999999999999999999 789999999999 9999999999999999999999999999999999
Q ss_pred HHHHHHhhcccccCcceeeechhhhhHHHHHHHHHHHHHHHHHHhhhhhccccchhhhhhHHHHHHHHHHHHHHHHHHHh
Q 017989 80 VLGTSLFCGGIANLRKEQKYDRKQADVNSLLLLLALLCHMLPLLFKYAAASSDITAKATLQLSRASSIVMLIGYFAYLVF 159 (362)
Q Consensus 80 ilGl~~l~~~~~~~~~~~~~~~~~~~~~~~ll~is~l~l~lp~~~~~~~~~~~~~~~~~~~is~~~~~ill~~Y~~yl~~ 159 (362)
++|++.++.+. +.+.+..+++. . .++.+.+ ++. .+. .| ++++|++|++++..|+.|+++
T Consensus 84 ilg~~~l~~~~---~~~~~~~~~~~---~-~ll~~~~-~~~--~~~---------~~--~~l~~~~g~~ll~~~~~yl~~ 142 (325)
T PRK10734 84 ILGLAALIRPF---TVHSDVLRREL---P-LMLLVSV-LAG--SVL---------YD--GQLSRSDGIFLLLLAVLWLLF 142 (325)
T ss_pred HHHHHHHhCCc---ccChHHHHHHH---H-HHHHHHH-HHH--HHH---------HC--CcCcHHHHHHHHHHHHHHHHH
Confidence 99999998543 23333333331 1 1111111 111 010 12 567899999999999999999
Q ss_pred hcccccccccccCCCCCCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcchhhhhhhhccccc
Q 017989 160 QLWTHREFFEAQEDSEDDDDVTEETPVIGFWSGFAWLVGMTAIIALLSEFVVGTIEDASNSWGISVSFISIILLPIVGNA 239 (362)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~a~~lv~~~~~i~~~~gi~~~~iG~~l~al~tsl 239 (362)
++|+||+..++++++++++++++.++..+.++...+++.+..++..++++++++.+.+++.+|+||.++|+|++|+|||+
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~l~~gs~~lv~~~~~ia~~lgis~~~iG~tiva~gtsl 222 (325)
T PRK10734 143 IVKIARLAERQGNDSLTREQLAELPREGGLPVAFLWLGIALIIMPMATRMVIDNATVLANYFAISELTIGLTVIAIGTSL 222 (325)
T ss_pred HHHHHHhcccccccccchhhhccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHhccH
Confidence 99888753221111110111111111124566778888899999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHhCCcchhHHHhhhHHHHHHHHHHHHHHHHHHhcCccee-eccchhHHHHHHHHHHHHHHHh-cCCeehH
Q 017989 240 AEHAGAIIFAFKNKLDISLGVALGSATQIAVFVVPLCVIISWIMGITMD-LNFNLLETGSLALAIIATAFTL-QDGTSHY 317 (362)
Q Consensus 240 PE~~~ai~aa~~g~~~~aig~~iGs~i~~~ll~lg~~~l~~~~~~~~~~-l~~~~~~~~~l~~s~l~~~~~~-~~~~~~~ 317 (362)
||.++++.++|||+.|+++||++|||+||+++++|.++++.+. ++. ..+..-...++.++.++..+.+ +++|++|
T Consensus 223 PE~~~sv~a~~~g~~~~avgniiGsnifni~~~lg~~~l~~~~---~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r 299 (325)
T PRK10734 223 PELATAIAGARKGENDIAVGNIIGSNIFNIVIVLGLPALISPG---EINPLAFSRDYWVMLLVSVIFALLCWRRKRRIGR 299 (325)
T ss_pred HHHHHHHHHHHcCCCchHHHHHHhHHHHHHHHHHHHHHhhccc---cccchhHHHHHHHHHHHHHHHHHHHHHcCCccCh
Confidence 9999999999999999999999999999999999999888642 111 1111111223444544443334 6789999
Q ss_pred HHHHHHHHHHHHHHHHHHHcCC
Q 017989 318 MKGFVLLLCYFVIGACFFVSNR 339 (362)
Q Consensus 318 ~~g~~ll~~Y~~y~~~~~~~~~ 339 (362)
++|..|+.+|+.|+...++.+.
T Consensus 300 ~~G~~Ll~~Y~~y~~~l~~~~~ 321 (325)
T PRK10734 300 GAGALLLGGFIVWLAMLYWLSP 321 (325)
T ss_pred HHHHHHHHHHHHHHHHHHhcCc
Confidence 9999999999999998887654
No 6
>COG0530 ECM27 Ca2+/Na+ antiporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4e-44 Score=339.52 Aligned_cols=303 Identities=24% Similarity=0.275 Sum_probs=246.1
Q ss_pred cchhHHHHHHHHHHhHHHHHHHHHHHHHHhC--ChhHHHHHHHhh-hHHHHHHHHHHhhCCcchhHHHHhHHHHHHHHHH
Q 017989 3 QPWVFALSLLGLTPLAERVSFLTEQIAFYTG--PTVGGLLNATCG-NATELIIAIFALYGRKIDVVKYSLLGSILSNLLL 79 (362)
Q Consensus 3 ~~~~F~~~~~~i~~~a~~~~~~~e~l~~~~g--~~~~g~~~~a~g-s~pEl~v~i~a~~~g~~~ia~g~iiGS~i~nlll 79 (362)
....|++++..++.++++++++++++++++| +.+.|++++++| |+||+.+++.|+.+|++|+++||++|||++|+++
T Consensus 11 ~~~~~i~~l~llv~~ad~lv~~a~~Is~~~gi~~~~iG~tiva~gTslPE~~vs~~a~l~g~~~iavGnvlGSni~ni~l 90 (320)
T COG0530 11 LILLLIAGLILLVKGADLLVDAASAISRRFGISELIIGLTIVAFGTSLPELAVSLVAALSGNPDIAVGNVLGSNIFNILL 90 (320)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHccChHHHHHHHHHHcCCCCeeeehhhhHHHHHHHH
Confidence 3578899999999999999999999999999 789999999999 9999999999999999999999999999999999
Q ss_pred HHHHHHhhcccccCcceeeechhhhhHHHHHHHHHHHHHHHHHHhhhhhccccchhhhhhHHHHHHHHHHHHHHHHHHHh
Q 017989 80 VLGTSLFCGGIANLRKEQKYDRKQADVNSLLLLLALLCHMLPLLFKYAAASSDITAKATLQLSRASSIVMLIGYFAYLVF 159 (362)
Q Consensus 80 ilGl~~l~~~~~~~~~~~~~~~~~~~~~~~ll~is~l~l~lp~~~~~~~~~~~~~~~~~~~is~~~~~ill~~Y~~yl~~ 159 (362)
++|++.++.+.+ .+++..+|+. ..++++.+.+..+. ..+++++.+++.++..|+.|+++
T Consensus 91 i~gl~ali~~~~---~~~~~~~r~~----~f~ll~~~~~~~~~--------------~~~~~~~~~gi~ll~l~~~yl~~ 149 (320)
T COG0530 91 ILGLAALIAPLK---VDSDVLRREI----PFLLLATLILLLVL--------------LDGHLSRLDGIVLLLLYVLYLYY 149 (320)
T ss_pred HHHHHHHHhhhH---hhhhHHHHhh----HHHHHHHHHHHHHH--------------HcCCccHHHHHHHHHHHHHHHHH
Confidence 999999996543 3333333332 22222222222111 22788999999999999999999
Q ss_pred hcccccccccccCCCCCCCCCCCCCC-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcchhhhhhhhcccc
Q 017989 160 QLWTHREFFEAQEDSEDDDDVTEETP-VIGFWSGFAWLVGMTAIIALLSEFVVGTIEDASNSWGISVSFISIILLPIVGN 238 (362)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~i~~~a~~lv~~~~~i~~~~gi~~~~iG~~l~al~ts 238 (362)
.+|.+|+..++ + |+++|.| +.+..+.+.+++.+.+.+..++++++++...+++.+|+||.++|++++|+|||
T Consensus 150 ~~~~~~~~~~~-----~--~~~~e~~~~~~~~~~~~~~~~~~~~l~~g~~llv~~~~~iA~~~gi~e~~igltivaigTS 222 (320)
T COG0530 150 LLKLSREAEEP-----G--EQENERPKKGSLRKALLVLVIGLILLVVGSELLVDGAVEIAEIFGISELIIGLTIVAIGTS 222 (320)
T ss_pred HHHhhhhcccc-----c--cccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHcc
Confidence 99988763111 1 1223333 67788999999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHHHHHhCCcchhHHHhhhHHHHHHHHHHHHHHHHHHhcCcceeeccchhHHH-HHHHHHHHHHH-HhcCCeeh
Q 017989 239 AAEHAGAIIFAFKNKLDISLGVALGSATQIAVFVVPLCVIISWIMGITMDLNFNLLETG-SLALAIIATAF-TLQDGTSH 316 (362)
Q Consensus 239 lPE~~~ai~aa~~g~~~~aig~~iGs~i~~~ll~lg~~~l~~~~~~~~~~l~~~~~~~~-~l~~s~l~~~~-~~~~~~~~ 316 (362)
+||.++++.++|||+.|+++||++|||++|+++++|...++++....|. .-..+.. ++..++++..+ ..+++|++
T Consensus 223 lPElv~si~a~rkg~~~iavGnviGSni~n~~~~lGi~~~~~~~~~~~~---~~~~~~~vmi~~~l~l~l~~~~~~~~i~ 299 (320)
T COG0530 223 LPELVVSIVAARKGEDDIAVGNVIGSNIFNILIVLGISALIGPITVEPS---ALLVDAPVLILVTLLLLLFLARRRRRIG 299 (320)
T ss_pred cHHHHHHHHHHHcCCCCeEEeeecchHHHHHHHHHhHHHhccccccCch---hHHHHHHHHHHHHHHHHHHHHhccCcch
Confidence 9999999999999999999999999999999999999999875322221 1122333 33445554445 46899999
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 017989 317 YMKGFVLLLCYFVIGACFFV 336 (362)
Q Consensus 317 ~~~g~~ll~~Y~~y~~~~~~ 336 (362)
|++|..+++.|+.|....++
T Consensus 300 r~~g~~ll~~Y~~~~~~~~~ 319 (320)
T COG0530 300 RKEGLLLLGLYIVYVALLIL 319 (320)
T ss_pred hHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999987654
No 7
>TIGR00367 K+-dependent Na+/Ca+ exchanger related-protein. This alignment models a family of bacterial and archaeal proteins that is homologous, except for lacking a central region of ~ 250 amino acids and an N-terminal region of 100 residues, to a functionally proven potassium-dependent sodium-calcium exchanger of the rat.
Probab=100.00 E-value=3.4e-43 Score=334.15 Aligned_cols=300 Identities=21% Similarity=0.233 Sum_probs=236.8
Q ss_pred chhHHHHHHHHHHhHHHHHHHHHHHHHHhC--ChhHHHHHHHhh-hHHHHHHHHHHhhCCcchhHHHHhHHHHHHHHHHH
Q 017989 4 PWVFALSLLGLTPLAERVSFLTEQIAFYTG--PTVGGLLNATCG-NATELIIAIFALYGRKIDVVKYSLLGSILSNLLLV 80 (362)
Q Consensus 4 ~~~F~~~~~~i~~~a~~~~~~~e~l~~~~g--~~~~g~~~~a~g-s~pEl~v~i~a~~~g~~~ia~g~iiGS~i~nllli 80 (362)
+..|.+++..++++++++++++|++++++| +.+.|++++++| |+||+++++.++.+|++++++||++|||++|++++
T Consensus 4 ~~~~~~~~~~~~~~a~~lv~~~~~ia~~lgl~~~v~G~tlla~gtslPEl~~si~a~~~g~~~la~g~ilGS~l~n~l~i 83 (307)
T TIGR00367 4 IGYLILGLILLIYGADLFVKSSVRIARKLGISPLIIGVTVVAIGTSLPELFTSLIASLIGQPDIGVGNVIGSNIFNILLI 83 (307)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHcccHHHHHHHHHHhcCCCCeehhhhhhHHHHHHHHH
Confidence 356888999999999999999999999999 899999999999 89999999999999999999999999999999999
Q ss_pred HHHHHhhcccccCcceeeechhhhhHHHHHHHHHHHHHHHHHHhhhhhccccchhhhhhHHHHHHHHHHHHHHHHHHHhh
Q 017989 81 LGTSLFCGGIANLRKEQKYDRKQADVNSLLLLLALLCHMLPLLFKYAAASSDITAKATLQLSRASSIVMLIGYFAYLVFQ 160 (362)
Q Consensus 81 lGl~~l~~~~~~~~~~~~~~~~~~~~~~~ll~is~l~l~lp~~~~~~~~~~~~~~~~~~~is~~~~~ill~~Y~~yl~~~ 160 (362)
+|++.++++.+ .+.+...++. ..++++...+.. +. .| +++++.+|++++..|+.|++++
T Consensus 84 ~g~~~l~~~~~---~~~~~~~~d~----~~~l~~~~~~~~---~~---------~~--g~i~~~~gi~ll~~Yv~yl~~~ 142 (307)
T TIGR00367 84 LGLSAIFSPII---VDTDWLRRDF----SFYLLVSILLLF---FG---------LD--GPISRLDGVVLLFLYVVYLLFL 142 (307)
T ss_pred HHHHHhhccee---echHHHHHHH----HHHHHHHHHHHH---HH---------Hh--CcchHHHHHHHHHHHHHHHHHH
Confidence 99999986432 3322233332 222223222211 10 12 4689999999999999999999
Q ss_pred cccccccccccCCCCCCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcchhhhhhhhccccch
Q 017989 161 LWTHREFFEAQEDSEDDDDVTEETPVIGFWSGFAWLVGMTAIIALLSEFVVGTIEDASNSWGISVSFISIILLPIVGNAA 240 (362)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~a~~lv~~~~~i~~~~gi~~~~iG~~l~al~tslP 240 (362)
+++||+. + +++.++++.++++++.+.++.+..++++.+++..++++++++++.+++.+|+|+.++|++++|++||+|
T Consensus 143 ~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~v~~~~~i~~~lgi~~~~~g~tl~a~~ts~P 219 (307)
T TIGR00367 143 VKVERQM--I-NDTYTEEQLDENNRRKQIFFLIVLLIIGLTGLVVGSRLLVDGAVQIAEIFGISEKIIGLTLLAIGTSLP 219 (307)
T ss_pred HHHHHhc--c-ccccchhhhhcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHcccH
Confidence 9888741 1 111111111111222456788899999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHhCCcchhHHHhhhHHHHHHHHHHHHHHHHHHhcCcceeeccchhHHH-HHHHHHHHHHHHhcCCeehHHH
Q 017989 241 EHAGAIIFAFKNKLDISLGVALGSATQIAVFVVPLCVIISWIMGITMDLNFNLLETG-SLALAIIATAFTLQDGTSHYMK 319 (362)
Q Consensus 241 E~~~ai~aa~~g~~~~aig~~iGs~i~~~ll~lg~~~l~~~~~~~~~~l~~~~~~~~-~l~~s~l~~~~~~~~~~~~~~~ 319 (362)
|.++++.++++|+.|+++||++|||++|.++++|+.+++.+. +++...-.++.. ++..++++..+..+|+|++|++
T Consensus 220 E~~~~i~a~~~g~~~~avg~~iGs~i~~~~~~~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 296 (307)
T TIGR00367 220 ELVVSVAAARKGLGDIAVGNVIGSNIFNILVGLGVPSLFYPI---PVEPLAYSLDAPVMVIVTLVLMLVFKTSMKLGRWE 296 (307)
T ss_pred HHHHHHHHHHcCCCchHHHHHhhhHHHHHHHHHHHHHHhccc---ccchhHHHHHHHHHHHHHHHHHHHHHhcCeehHHH
Confidence 999999999999999999999999999999999999998753 222111223333 3344455545556799999999
Q ss_pred HHHHHHHHHHH
Q 017989 320 GFVLLLCYFVI 330 (362)
Q Consensus 320 g~~ll~~Y~~y 330 (362)
|..|+.+|+.|
T Consensus 297 g~~l~~~Y~~y 307 (307)
T TIGR00367 297 GFLLLALYIAY 307 (307)
T ss_pred HHHHHHHHHhC
Confidence 99999999876
No 8
>PRK10599 calcium/sodium:proton antiporter; Provisional
Probab=100.00 E-value=8.4e-42 Score=325.29 Aligned_cols=317 Identities=18% Similarity=0.267 Sum_probs=265.7
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHhCChhHHHHHHHhhhHHHHH--HHHHHhhCCcchhHHHHhHHHHHHHHHHHHHHH
Q 017989 7 FALSLLGLTPLAERVSFLTEQIAFYTGPTVGGLLNATCGNATELI--IAIFALYGRKIDVVKYSLLGSILSNLLLVLGTS 84 (362)
Q Consensus 7 F~~~~~~i~~~a~~~~~~~e~l~~~~g~~~~g~~~~a~gs~pEl~--v~i~a~~~g~~~ia~g~iiGS~i~nlllilGl~ 84 (362)
+...+..++.++....+-+|.+++|+||.+|.+++.-.-...|.. +++.....+++.++..++....+..+..++|+|
T Consensus 43 ~~~~~~~i~~~~~~~v~hAe~lA~~~GeP~GtliLtlsv~~iEv~li~~~Ml~g~~~~tlaRDtvfa~vMi~~nGilGl~ 122 (366)
T PRK10599 43 NLLALIGILSSAFSVVRHADVLAHRLGEPYGSLILSLSVVILEVSLISALMATGDAAPTLMRDTLYSIIMIVTGGLVGFS 122 (366)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHHHHHcCCCCCchHHHHHHHHHHHHHhccHHHHH
Confidence 334445566688889999999999999999998875444788843 333322346799999999999999999999999
Q ss_pred HhhcccccCcceeeechhhh-hHHHHHHHHHHHHHHHHHHhhhhhccccchhhhhhHHHHHHHHHHHHHHHHHHHhhccc
Q 017989 85 LFCGGIANLRKEQKYDRKQA-DVNSLLLLLALLCHMLPLLFKYAAASSDITAKATLQLSRASSIVMLIGYFAYLVFQLWT 163 (362)
Q Consensus 85 ~l~~~~~~~~~~~~~~~~~~-~~~~~ll~is~l~l~lp~~~~~~~~~~~~~~~~~~~is~~~~~ill~~Y~~yl~~~~~~ 163 (362)
+++||+|+ ++|++|.+.+ +....++.++++++++|.++.. +. .....++..+++++++|..|++||++|
T Consensus 123 ll~GGlr~--~eQ~fn~~ga~~~~~~ll~La~l~LvlP~~~~~----~~----~s~~~s~~~avv~lvlY~~fL~fQl~t 192 (366)
T PRK10599 123 LLLGGRKF--ATQYMNLFGIKQYLIALFPLAIIVLVFPMALPG----AN----FSTGQALLVALISAAMYGVFLLIQTKT 192 (366)
T ss_pred HHHhcccc--CeeecCHHhHHHHHHHHHHHHHHHHhcCcccCC----Cc----cchhHHHHHHHHHHHHHHHHHHHhccc
Confidence 99999984 8999999866 6778899999999999998521 11 113467889999999999999999999
Q ss_pred ccccccccCCCCCC-CCCCCCCCc--cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcchhhhhhhhccccch
Q 017989 164 HREFFEAQEDSEDD-DDVTEETPV--IGFWSGFAWLVGMTAIIALLSEFVVGTIEDASNSWGISVSFISIILLPIVGNAA 240 (362)
Q Consensus 164 ~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~l~~~~~~i~~~a~~lv~~~~~i~~~~gi~~~~iG~~l~al~tslP 240 (362)
||++|++++++++| +++++++|+ ..+| ...+++++++.+...||++++++|...+.+|+|+.++|+++ |+..+.|
T Consensus 193 Hr~~F~~~~~~~~~~~~~~~~~~~~~~~~~-s~~~L~v~lv~Vv~lAe~lv~sIe~~v~~~Glp~afiGvII-aiv~~ap 270 (366)
T PRK10599 193 HQSLFVYEHEDEGDDDDPHHGKPSAHSSLW-HAIWLIIHLIAVIAVTKMNASPLETLLTSMNAPVAFTGFLV-ALLILSP 270 (366)
T ss_pred hHHHhccccccccccccccccccccchhHH-HHHHHHHHHHHHHHHHHHhHhhHHHHHHhcCCCHHHHHHHH-HHHHcch
Confidence 99999743322211 112222222 3333 56788889999999999999999999999999999999886 8999999
Q ss_pred hHHHHHHHHHhCCcchhHHHhhhHHHHHHHHHHHHHHHHHHhcCcceeeccchhHHHHHHHHHHHHHHHhcCCeehHHHH
Q 017989 241 EHAGAIIFAFKNKLDISLGVALGSATQIAVFVVPLCVIISWIMGITMDLNFNLLETGSLALAIIATAFTLQDGTSHYMKG 320 (362)
Q Consensus 241 E~~~ai~aa~~g~~~~aig~~iGs~i~~~ll~lg~~~l~~~~~~~~~~l~~~~~~~~~l~~s~l~~~~~~~~~~~~~~~g 320 (362)
|.++++++++|||+|.+++.++||.++.+++.+|..++++|+.|+|+++.++++++.++++++++....+.|||.||.||
T Consensus 271 E~~tAV~aA~kNkmq~slnialGSsLq~illtvP~lvlig~~~g~pm~L~f~~~e~vlL~ltv~v~~~t~~dGrsN~LeG 350 (366)
T PRK10599 271 EGLGALKAVLNNQVQRAMNLFFGSVLATISLTVPVVTLIAFLTGNELQFGLGAPEMVVMVASLVLCHISFSTGRTNVLNG 350 (366)
T ss_pred hHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCHHHHHHHHHHHHHHHhccCCCchHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999998888889999999999
Q ss_pred HHHHHHHHHHHHHHH
Q 017989 321 FVLLLCYFVIGACFF 335 (362)
Q Consensus 321 ~~ll~~Y~~y~~~~~ 335 (362)
.+++++|+.|+...+
T Consensus 351 ~~hL~lf~~y~~l~~ 365 (366)
T PRK10599 351 AAHLALFAAYLMTIF 365 (366)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999997654
No 9
>TIGR00927 2A1904 K+-dependent Na+/Ca+ exchanger.
Probab=100.00 E-value=1.1e-32 Score=281.69 Aligned_cols=146 Identities=18% Similarity=0.195 Sum_probs=119.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcchhhhhhhhccccchhHHHHHHHHHhCCcchhHHHhhhHHHHHHHHH
Q 017989 193 FAWLVGMTAIIALLSEFVVGTIEDASNSWGISVSFISIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQIAVFV 272 (362)
Q Consensus 193 ~~~l~~~~~~i~~~a~~lv~~~~~i~~~~gi~~~~iG~~l~al~tslPE~~~ai~aa~~g~~~~aig~~iGs~i~~~ll~ 272 (362)
.+.++.++++|.+.+..+++.+..++..+|+|+.++|++++|+|||+||+++++.++++|..|+|++|++|||+||++++
T Consensus 935 ~ltFi~SIiwIsi~SyilV~~at~IG~vlGIse~VmGlTfLA~GTSIPDlisSvivArkG~gdMAVan~iGSNIFnIllg 1014 (1096)
T TIGR00927 935 VITFLGSIMWIAMFSYLMVWWAHQVGETIGISEEIMGLTILAAGTSIPDLITSVIVARKGLGDMAVSSSVGSNIFDITVG 1014 (1096)
T ss_pred eehHHHHHHHHHHHHHHHHHHHHHhhhhcCCChhhhhhhhhhhhcccHHHHHHHHHHHccCCcceeeeccccchheeeee
Confidence 36788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhc--Ccceeeccc-hhH-HHHHHHHHHHH--HHHhcCCeehHHHHHHHHHHHHHHHHHHHHcC
Q 017989 273 VPLCVIISWIM--GITMDLNFN-LLE-TGSLALAIIAT--AFTLQDGTSHYMKGFVLLLCYFVIGACFFVSN 338 (362)
Q Consensus 273 lg~~~l~~~~~--~~~~~l~~~-~~~-~~~l~~s~l~~--~~~~~~~~~~~~~g~~ll~~Y~~y~~~~~~~~ 338 (362)
+|+.+++.... ..++..... .+. ..+++.+++++ .+...+.+++|..|++++++|++|+++.+...
T Consensus 1015 LGlPWlI~~li~g~~pV~V~S~GL~~sI~LLF~~LlflissI~l~kwrL~R~lGivlLvlYvvFLV~aiLiE 1086 (1096)
T TIGR00927 1015 LPVPWLLFSLINGLQPVPVSSNGLFCAIVLLFLMLLFVISSIASCKWRMNKILGFTMFLLYFVFLIISVMLE 1086 (1096)
T ss_pred ccHHHHHHHHhccCcceeecCccHHHHHHHHHHHHHHHHHHHHhcceEEechHHHHHHHHHHHHHHHHHHHh
Confidence 99999887543 234433332 222 22333333222 22347789999999999999999998866654
No 10
>KOG1307 consensus K+-dependent Ca2+/Na+ exchanger NCKX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-33 Score=264.72 Aligned_cols=312 Identities=19% Similarity=0.227 Sum_probs=234.4
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHhC--ChhHHHHHHHhh-hHHHHHHHHHHhhCCcchhHHHHhHHHHHHHHHHHHHHHH
Q 017989 9 LSLLGLTPLAERVSFLTEQIAFYTG--PTVGGLLNATCG-NATELIIAIFALYGRKIDVVKYSLLGSILSNLLLVLGTSL 85 (362)
Q Consensus 9 ~~~~~i~~~a~~~~~~~e~l~~~~g--~~~~g~~~~a~g-s~pEl~v~i~a~~~g~~~ia~g~iiGS~i~nlllilGl~~ 85 (362)
+-.++|+ |.++|+.+.+.+.++++ +.+.|.|+.|.| |.||++++++..+-.+.++++|+|+||..||++.++|.|.
T Consensus 68 FvALAIV-CDefFVPSL~vItEkL~iSdDVAGATFMAAGgSAPElFTSvIGVFIt~~dVGiGTIVGSAvFNIL~Vig~C~ 146 (588)
T KOG1307|consen 68 FVALAIV-CDEFFVPSLDVITEKLGISDDVAGATFMAAGGSAPELFTSVIGVFITQGDVGIGTIVGSAVFNILCVIGVCG 146 (588)
T ss_pred HHHHHHH-hcccccccHHHHHHHhcCcccccchhhhhccCCchHHhhhheeEEEecCCcceeeeeehhhhhHHHHHHHHH
Confidence 3344444 99999999999999999 889999999999 9999999999999999999999999999999999999999
Q ss_pred hhcccccCcceeeechhhhhHHHHHHHHHHHHHHHHHHhhhhhccccchhhhhhHHHHHHHHHHHHHHHHHHHhhcccc-
Q 017989 86 FCGGIANLRKEQKYDRKQADVNSLLLLLALLCHMLPLLFKYAAASSDITAKATLQLSRASSIVMLIGYFAYLVFQLWTH- 164 (362)
Q Consensus 86 l~~~~~~~~~~~~~~~~~~~~~~~ll~is~l~l~lp~~~~~~~~~~~~~~~~~~~is~~~~~ill~~Y~~yl~~~~~~~- 164 (362)
++.+ ...+......-||.++|. ++++.+++ +| +| -.+.|+++++|+.+|+.|..++-+..
T Consensus 147 LFSr-qvl~LtWWPLfRD~sfY~----lsl~~Li~--Ff----------~D--~~I~WwEaL~L~~~Yi~Yv~~MKfN~~ 207 (588)
T KOG1307|consen 147 LFSR-QVLNLTWWPLFRDVSFYT----LSLIMLIY--FF----------LD--ELIMWWEALALLLMYISYVVFMKFNGQ 207 (588)
T ss_pred hhcc-cccccccchhhhhhHHHH----HHHHHHHH--HH----------Hh--hHHHHHHHHHHHHHHHHHheeeehhhH
Confidence 9863 223455566778877763 33333221 11 23 57899999999999999998654210
Q ss_pred ----------cc----------------------c-c-----------------------c---cc--------------
Q 017989 165 ----------RE----------------------F-F-----------------------E---AQ-------------- 171 (362)
Q Consensus 165 ----------~~----------------------~-~-----------------------~---~~-------------- 171 (362)
|+ . - . +.
T Consensus 208 ie~~vk~~~~rn~v~v~a~~~~~~~~~~~~Aa~~~~~~~~~a~~p~~~~~~~~~i~ql~~~~~~~~~~~~g~~~~~~~~~ 287 (588)
T KOG1307|consen 208 IEQLVKKMLKRNKVNVLANGAEIKPGKNEDAAAELLDKSNAADLPHHNSASRNSIAQLMSGDPDPLSESAGLRIMISGHT 287 (588)
T ss_pred HHHHHHHHhccCcceecccccccCCcccchhhhhhhccCccccccccchhhHhHHHHHhcCCCccchhhccCcccccCCC
Confidence 00 0 0 0 00
Q ss_pred -----------------------CCC--------------------------C---------------------------
Q 017989 172 -----------------------EDS--------------------------E--------------------------- 175 (362)
Q Consensus 172 -----------------------~~~--------------------------~--------------------------- 175 (362)
+++ +
T Consensus 288 ~~~g~~~~~~~~l~~~~~~~~~~~~~~~~~k~~~~~i~~~~~h~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (588)
T KOG1307|consen 288 PPNGRTQEKSRTLLQLPARLDNEDDNENGEKAVNIKIDIGDTHELDITGPNSGGRTSDVERIDVSDEEEEEAENENEDNE 367 (588)
T ss_pred CCCCchhhhhhhhhhcccccccccccccccccccccccccccceecccCCCCCcccCccccCCccccccchhcccCCCCc
Confidence 000 0
Q ss_pred ---CC--C--CCCCCCC---------------------------------ccchH-HHHHHHHHHHHHHHHHHHHHHHHH
Q 017989 176 ---DD--D--DVTEETP---------------------------------VIGFW-SGFAWLVGMTAIIALLSEFVVGTI 214 (362)
Q Consensus 176 ---~~--~--~~~~~~~---------------------------------~~~~~-~~~~~l~~~~~~i~~~a~~lv~~~ 214 (362)
++ + ++++++| +++.. .-...++.++.||+.-++.+|+.+
T Consensus 368 ~~~e~~~~~~~e~~e~pl~~~wP~~~~k~l~y~~~~Pi~fpLw~TvPdvrkp~~rkfF~vTFigSIlWIA~fSYLMVWwa 447 (588)
T KOG1307|consen 368 EFEEEQESEEEEPEEEPLSFDWPETKRKRLTYAFLAPIVFPLWLTVPDVRKPRSRKFFPVTFIGSILWIAAFSYLMVWWA 447 (588)
T ss_pred chhhcchhhhccccCCCcCCCCccchhheeeeEEEeeeeeeEEEecCCcCCccccceeehHHHHHHHHHHHHHHHHHHHH
Confidence 00 0 0000001 01111 123677889999999999999999
Q ss_pred HHHHhhcCCCcchhhhhhhhccccchhHHHHHHHHHhCCcchhHHHhhhHHHHHHHHHHHHHHHHHHhcC---cceeecc
Q 017989 215 EDASNSWGISVSFISIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQIAVFVVPLCVIISWIMG---ITMDLNF 291 (362)
Q Consensus 215 ~~i~~~~gi~~~~iG~~l~al~tslPE~~~ai~aa~~g~~~~aig~~iGs~i~~~ll~lg~~~l~~~~~~---~~~~l~~ 291 (362)
+.+++.+|||+.++|+|++|.|||+||+++++..||||-.|+|+++.+|||+|++++++|+++++..... .++..+.
T Consensus 448 ~~iGeT~gIp~eIMGLTiLAAGTSIPDlitSvIVARKGlGDMAVSsSiGSNiFDI~VGLplPWLL~~lI~~~~~~i~vsS 527 (588)
T KOG1307|consen 448 NIIGETLGIPDEIMGLTILAAGTSIPDLITSVIVARKGLGDMAVSSSIGSNIFDILVGLPLPWLLYTLIYGFKSKISVSS 527 (588)
T ss_pred HHcccccCCCHHHhhhhhhhcCCchHHhhHhhhhcccccccceeecccccchhheeecCCcHHHHHHHHhhcCCceeecC
Confidence 9999999999999999999999999999999999999999999999999999999999999999986532 2255544
Q ss_pred c-hh-HHHHHHHHHH--HHHHHhcCCeehHHHHHHHHHHHHHHHHHHHHcCCC
Q 017989 292 N-LL-ETGSLALAII--ATAFTLQDGTSHYMKGFVLLLCYFVIGACFFVSNRP 340 (362)
Q Consensus 292 ~-~~-~~~~l~~s~l--~~~~~~~~~~~~~~~g~~ll~~Y~~y~~~~~~~~~~ 340 (362)
+ .. .+.+++++++ +....++++|.++.-|+.++.+|++|.+.....+.+
T Consensus 528 ~GL~csi~lLf~ml~v~v~~ia~~rWrMnK~lG~~m~llY~~Fl~~svmlE~~ 580 (588)
T KOG1307|consen 528 NGLVCSIGLLFAMLIVLVLGIALSRWRMNKILGFLMILLYFVFLIISVMLETD 580 (588)
T ss_pred CceehHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHhhhheecc
Confidence 3 22 3334554443 344557899999999999999999999876655443
No 11
>PLN03151 cation/calcium exchanger; Provisional
Probab=99.95 E-value=9.9e-26 Score=230.55 Aligned_cols=307 Identities=15% Similarity=0.154 Sum_probs=218.7
Q ss_pred HHHhHHHHHHHHHHHHHHhC--ChhHHHHHHHhh-hHHHHHHHHHHhhC-CcchhHHHHhHHHHHHHHHHHHHHHHhhcc
Q 017989 14 LTPLAERVSFLTEQIAFYTG--PTVGGLLNATCG-NATELIIAIFALYG-RKIDVVKYSLLGSILSNLLLVLGTSLFCGG 89 (362)
Q Consensus 14 i~~~a~~~~~~~e~l~~~~g--~~~~g~~~~a~g-s~pEl~v~i~a~~~-g~~~ia~g~iiGS~i~nlllilGl~~l~~~ 89 (362)
-..++++|+.+.+.++++++ |.+.|+|++|+| +.||+++++.|... ++.++++|+++||+++|++++.|++.++.+
T Consensus 155 ~~ta~dyF~p~l~~Is~~L~lse~vAGvTlLAfGNsaPDlf~si~a~~~~~~~~l~ig~ilGs~lf~~~vV~G~v~l~~~ 234 (650)
T PLN03151 155 GNTAADYFCCSLEKLSKLLRLPPTVAGVTLLPLGNGAPDVFASIAAFVGKDAGEVGLNSVLGGAVFVTCVVVGIVSLCVA 234 (650)
T ss_pred HHHHHHHhhHHHHHHHHHhCCCHHHHHHHHHHHhCCcHHHHHHHHHHHcCCCCceeeehhhhHHHHHHHHHHHHHHHhcc
Confidence 35589999999999999999 899999999999 89999999988665 778999999999999999999999998754
Q ss_pred cccCcceeeechhhhhHHHHHHHHHHHHHHHHHHhhhhhccccchhhhhhHHHHHHHHHHHHHHHHHHHhhcc-----cc
Q 017989 90 IANLRKEQKYDRKQADVNSLLLLLALLCHMLPLLFKYAAASSDITAKATLQLSRASSIVMLIGYFAYLVFQLW-----TH 164 (362)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~ll~is~l~l~lp~~~~~~~~~~~~~~~~~~~is~~~~~ill~~Y~~yl~~~~~-----~~ 164 (362)
.++.+.+++...||..++ ++++..+.+ ++ . .++++++++++++.+|++|+..... ++
T Consensus 235 ~~pf~v~~~~f~RD~~F~----lla~~~l~~--~l----------~--~g~v~~~eai~ll~lY~~Yv~vv~~~~~l~~~ 296 (650)
T PLN03151 235 DKEVQIDKRCFIRDLCFF----LFTLVSLLV--IL----------M--VGKVTVGGAIAFVSIYVVYAFLVAANEILRKH 296 (650)
T ss_pred CCceeecchhHHHhHHHH----HHHHHHHHH--HH----------H--cCeEhHHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 345556666677774332 223222211 11 1 2678999999999999999864431 11
Q ss_pred -ccc------------------------------ccccCCCCC-----------------------------C-------
Q 017989 165 -REF------------------------------FEAQEDSED-----------------------------D------- 177 (362)
Q Consensus 165 -~~~------------------------------~~~~~~~~~-----------------------------~------- 177 (362)
|+. .+.+++++. |
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 376 (650)
T PLN03151 297 ARRLKLDVVTPLLPVQGSIFSPSVEEDESMYSPLLESDTESDVPRLQTSLPQWMWASNVAIYSNHFAKGSVHDEERPPWG 376 (650)
T ss_pred HHhhhhhhcccccccccccccccchhhhhhhhhhhcccccccchhhccccccccccccccccccchhhhhhhhccccccc
Confidence 000 000000000 0
Q ss_pred -CCC--CC-----------------------------CCCccch------------------------------------
Q 017989 178 -DDV--TE-----------------------------ETPVIGF------------------------------------ 189 (362)
Q Consensus 178 -~~~--~~-----------------------------~~~~~~~------------------------------------ 189 (362)
+++ ++ ++++|+.
T Consensus 377 ~~~~d~e~~~~~~~~~ki~~ll~~Pl~lll~LTIP~vd~~~WsK~l~~~q~~l~P~l~~~~~~~~~~~~~~~~~~vw~~~ 456 (650)
T PLN03151 377 WTDEGAEVESSLFSCSKLFSLLEMPLTIPRRLTIPIVEEDRWSKTYAVASASLAPVLLAFLWSSQDDVSLQARIAAYFIG 456 (650)
T ss_pred cCchhhhhhcchhHHHHHHHHHHhHHHHHHHhcCCCCCcccCCHHHHHHHHHHHHHHHHHHHhhccccccccchHHHHHH
Confidence 000 00 0001111
Q ss_pred --------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcchhhhhhhhccccchhHH
Q 017989 190 --------------------------WSGFAWLVGMTAIIALLSEFVVGTIEDASNSWGISVSFISIILLPIVGNAAEHA 243 (362)
Q Consensus 190 --------------------------~~~~~~l~~~~~~i~~~a~~lv~~~~~i~~~~gi~~~~iG~~l~al~tslPE~~ 243 (362)
......++.+++++...+..++..++.++..+|+|++++|+|++|+|+|+||++
T Consensus 457 ~~ig~~Lai~vf~~tr~d~PP~~~~~~~~~~~f~~Si~wi~~~a~elv~~l~~iG~i~~is~~~lglTvlA~gnsi~Dli 536 (650)
T PLN03151 457 VAIGSTLGFLAYKYTEPDRPPRRFLIPWVLGGFIMSIVWFYMIANELVALLVAFGVIFGINPSILGLTVLAWGNSMGDLM 536 (650)
T ss_pred HHHHHHHHHHHHHHcCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHccHHHHH
Confidence 012234566788899999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCc--chhHHHhhhHHHHHHHHHHHHHHHHHHhcCcc--eeeccch-hHHH--HHHHHHHH--HHHHhcCCe
Q 017989 244 GAIIFAFKNKL--DISLGVALGSATQIAVFVVPLCVIISWIMGIT--MDLNFNL-LETG--SLALAIIA--TAFTLQDGT 314 (362)
Q Consensus 244 ~ai~aa~~g~~--~~aig~~iGs~i~~~ll~lg~~~l~~~~~~~~--~~l~~~~-~~~~--~l~~s~l~--~~~~~~~~~ 314 (362)
+.+.-|++|.+ .+|+++++|+++||+++.+|+..++....+++ .....+. .... .++.+++. .....++.|
T Consensus 537 an~~lA~~G~~~m~mA~~a~~ggp~F~il~glG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~L~~~li~~~~~~f~ 616 (650)
T PLN03151 537 SNVALAMNGGDGVQIAMSGCYAGPMFNTLVGLGMSMLLGAWSKSPESYMLPEDSSLFYTMGFLVSGLIWALVVLPRNDMR 616 (650)
T ss_pred HHHHHHHcCCchhHHHHHHhhhhhHHHHHHhccHHHHHHHhhcCCCceeecCCChHHHHHHHHHHHHHHHHHHHHHhCee
Confidence 99999999964 67888999999999999999999988654333 3222221 1111 12222221 112347889
Q ss_pred ehHHHHHHHHHHHHHHHHHHHHcC
Q 017989 315 SHYMKGFVLLLCYFVIGACFFVSN 338 (362)
Q Consensus 315 ~~~~~g~~ll~~Y~~y~~~~~~~~ 338 (362)
.+|..|..++.+|+.|+++.....
T Consensus 617 ~~R~~G~~li~~Y~~Fl~~~~~~~ 640 (650)
T PLN03151 617 PNKTLGVGLIALYLIFLTFRVSTA 640 (650)
T ss_pred echhHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998866543
No 12
>PRK10734 putative calcium/sodium:proton antiporter; Provisional
Probab=99.88 E-value=7.7e-22 Score=188.58 Aligned_cols=144 Identities=18% Similarity=0.174 Sum_probs=118.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcchhhhhhhhccccchhHHHHHHHHHhCCcchhHHHhhhHHHHHHHH
Q 017989 192 GFAWLVGMTAIIALLSEFVVGTIEDASNSWGISVSFISIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQIAVF 271 (362)
Q Consensus 192 ~~~~l~~~~~~i~~~a~~lv~~~~~i~~~~gi~~~~iG~~l~al~tslPE~~~ai~aa~~g~~~~aig~~iGs~i~~~ll 271 (362)
.+..+++++.++..++++++++.+.+++++|+|+.++|+|++|+|||+||+++++.++++|++|+++||++|||++|+++
T Consensus 4 ~~~~~~~gl~~l~~ga~~lv~~~~~ia~~lgis~~viG~tiva~gTSlPEl~vsv~A~~~g~~~ia~GnilGSni~ni~l 83 (325)
T PRK10734 4 ATALLIIGLLLLVYGADRLVFAASILCRTFGIPPLIIGMTVVGIGTSLPEIIVSVAASLHGQRDLAVGTALGSNITNILL 83 (325)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHcchhHHHHHHHHHHcCCCcchhhhhhhHHHHHHHH
Confidence 35678889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCcceeeccchhHHHHHHHHHHHHHHHhcCCeehHHHHHHHHHHHHHHHHHHHHcC
Q 017989 272 VVPLCVIISWIMGITMDLNFNLLETGSLALAIIATAFTLQDGTSHYMKGFVLLLCYFVIGACFFVSN 338 (362)
Q Consensus 272 ~lg~~~l~~~~~~~~~~l~~~~~~~~~l~~s~l~~~~~~~~~~~~~~~g~~ll~~Y~~y~~~~~~~~ 338 (362)
++|+..++++. +++.+....+...++.+.++..+...|++++|++|.+++.+|+.|+.+.++..
T Consensus 84 ilg~~~l~~~~---~~~~~~~~~~~~~ll~~~~~~~~~~~~~~l~~~~g~~ll~~~~~yl~~~~~~~ 147 (325)
T PRK10734 84 ILGLAALIRPF---TVHSDVLRRELPLMLLVSVLAGSVLYDGQLSRSDGIFLLLLAVLWLLFIVKIA 147 (325)
T ss_pred HHHHHHHhCCc---ccChHHHHHHHHHHHHHHHHHHHHHHCCcCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999887632 22211112233333333333334457899999999999999999998877543
No 13
>TIGR00367 K+-dependent Na+/Ca+ exchanger related-protein. This alignment models a family of bacterial and archaeal proteins that is homologous, except for lacking a central region of ~ 250 amino acids and an N-terminal region of 100 residues, to a functionally proven potassium-dependent sodium-calcium exchanger of the rat.
Probab=99.84 E-value=3.4e-20 Score=176.49 Aligned_cols=142 Identities=20% Similarity=0.242 Sum_probs=121.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcchhhhhhhhccccchhHHHHHHHHHhCCcchhHHHhhhHHHHHHHHH
Q 017989 193 FAWLVGMTAIIALLSEFVVGTIEDASNSWGISVSFISIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQIAVFV 272 (362)
Q Consensus 193 ~~~l~~~~~~i~~~a~~lv~~~~~i~~~~gi~~~~iG~~l~al~tslPE~~~ai~aa~~g~~~~aig~~iGs~i~~~ll~ 272 (362)
+..+..+..++..++++++++++.+++++|+|+.+.|++++|+|||+||.++++.++++|+.|+++||++|||++|++++
T Consensus 4 ~~~~~~~~~~~~~~a~~lv~~~~~ia~~lgl~~~v~G~tlla~gtslPEl~~si~a~~~g~~~la~g~ilGS~l~n~l~i 83 (307)
T TIGR00367 4 IGYLILGLILLIYGADLFVKSSVRIARKLGISPLIIGVTVVAIGTSLPELFTSLIASLIGQPDIGVGNVIGSNIFNILLI 83 (307)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHcccHHHHHHHHHHhcCCCCeehhhhhhHHHHHHHHH
Confidence 45667889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCcceeeccc--hhHHHHHHHHHHHHHHHhcCCeehHHHHHHHHHHHHHHHHHHHHcCC
Q 017989 273 VPLCVIISWIMGITMDLNFN--LLETGSLALAIIATAFTLQDGTSHYMKGFVLLLCYFVIGACFFVSNR 339 (362)
Q Consensus 273 lg~~~l~~~~~~~~~~l~~~--~~~~~~l~~s~l~~~~~~~~~~~~~~~g~~ll~~Y~~y~~~~~~~~~ 339 (362)
+|+..++++ +..+.+ .++...++++..+..+...+++++|++|.+++..|++|+...+..++
T Consensus 84 ~g~~~l~~~-----~~~~~~~~~~d~~~~l~~~~~~~~~~~~g~i~~~~gi~ll~~Yv~yl~~~~~~~~ 147 (307)
T TIGR00367 84 LGLSAIFSP-----IIVDTDWLRRDFSFYLLVSILLLFFGLDGPISRLDGVVLLFLYVVYLLFLVKVER 147 (307)
T ss_pred HHHHHhhcc-----eeechHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999988763 222222 33444444554445555678899999999999999999998887665
No 14
>COG0530 ECM27 Ca2+/Na+ antiporter [Inorganic ion transport and metabolism]
Probab=99.84 E-value=3.3e-20 Score=176.31 Aligned_cols=154 Identities=21% Similarity=0.269 Sum_probs=132.3
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcchhhhhhhhccccchhHHHHHHHHHhCCcchhHHHhhhHHHH
Q 017989 188 GFWSGFAWLVGMTAIIALLSEFVVGTIEDASNSWGISVSFISIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQ 267 (362)
Q Consensus 188 ~~~~~~~~l~~~~~~i~~~a~~lv~~~~~i~~~~gi~~~~iG~~l~al~tslPE~~~ai~aa~~g~~~~aig~~iGs~i~ 267 (362)
..+..+..+++++.+++.+||+++++.+.+++++|+|+.++|.|++|+|||+||..++..++.+|++|+++||++|||++
T Consensus 7 ~~~~~~~~~i~~l~llv~~ad~lv~~a~~Is~~~gi~~~~iG~tiva~gTslPE~~vs~~a~l~g~~~iavGnvlGSni~ 86 (320)
T COG0530 7 MLLLLILLLIAGLILLVKGADLLVDAASAISRRFGISELIIGLTIVAFGTSLPELAVSLVAALSGNPDIAVGNVLGSNIF 86 (320)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHccChHHHHHHHHHHcCCCCeeeehhhhHHHH
Confidence 45667788899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCcceeeccchhHHHHHHHHHHHHHHHhcCCeehHHHHHHHHHHHHHHHHHHHHcCCCCCCC
Q 017989 268 IAVFVVPLCVIISWIMGITMDLNFNLLETGSLALAIIATAFTLQDGTSHYMKGFVLLLCYFVIGACFFVSNRPLDSD 344 (362)
Q Consensus 268 ~~ll~lg~~~l~~~~~~~~~~l~~~~~~~~~l~~s~l~~~~~~~~~~~~~~~g~~ll~~Y~~y~~~~~~~~~~~~~~ 344 (362)
|++++.|+..++++. +.+.+.-.++.....++.....+...+++++|++|+.++.+|+.|+.+.++.++..+++
T Consensus 87 ni~li~gl~ali~~~---~~~~~~~~r~~~f~ll~~~~~~~~~~~~~~~~~~gi~ll~l~~~yl~~~~~~~~~~~~~ 160 (320)
T COG0530 87 NILLILGLAALIAPL---KVDSDVLRREIPFLLLATLILLLVLLDGHLSRLDGIVLLLLYVLYLYYLLKLSREAEEP 160 (320)
T ss_pred HHHHHHHHHHHHhhh---HhhhhHHHHhhHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHHHHHHhhhhcccc
Confidence 999999999999864 22222123445555555555557778999999999999999999999988877766664
No 15
>TIGR00927 2A1904 K+-dependent Na+/Ca+ exchanger.
Probab=99.80 E-value=7.1e-19 Score=181.03 Aligned_cols=135 Identities=19% Similarity=0.274 Sum_probs=113.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCcchhhhhhhhccccchhHHHHHHHHHhCCcchhHHHhhhHHHHHHHHHHHHHHHHH
Q 017989 201 AIIALLSEFVVGTIEDASNSWGISVSFISIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQIAVFVVPLCVIIS 280 (362)
Q Consensus 201 ~~i~~~a~~lv~~~~~i~~~~gi~~~~iG~~l~al~tslPE~~~ai~aa~~g~~~~aig~~iGs~i~~~ll~lg~~~l~~ 280 (362)
++...++++|+++++.+++++|+|+.++|+|++|+|||+||+++++.++..++.|+++|+++|||++|+++++|+..++.
T Consensus 470 ~LaIv~dDyFVPSLe~IAekLgLSE~VAGaTLLAfGTSAPELfTSLiAv~~g~sDIGVGNIVGSnIFNILLVLGl~aLis 549 (1096)
T TIGR00927 470 ALAIVCDEYFVPALGVITDKLQISEDVAGATFMAAGGSAPELFTSLIGVFISHSNVGIGTIVGSAVFNILFVIGTCALFS 549 (1096)
T ss_pred HHHHHHHHHhHHHHHHHHHHhCCcHhhhheeeeeeecCcHHHHHHHHHHHcCCCcceehhhHhHHHHHHHHHHhhheeec
Confidence 33467789999999999999999999999999999999999999999999999999999999999999999999987775
Q ss_pred HhcCcceeec--cchhHHHHHHHHHHHHHHHhcCCeehHHHHHHHHHHHHHHHHHHHHcC
Q 017989 281 WIMGITMDLN--FNLLETGSLALAIIATAFTLQDGTSHYMKGFVLLLCYFVIGACFFVSN 338 (362)
Q Consensus 281 ~~~~~~~~l~--~~~~~~~~l~~s~l~~~~~~~~~~~~~~~g~~ll~~Y~~y~~~~~~~~ 338 (362)
.. .+.++ .-.++..++++++.++.+++.++++++++|++|+++|++|++.+++.+
T Consensus 550 ~~---~l~Ld~~~L~RDllFyILAv~lLilf~lDG~Itr~EgIILLlLYiiYVvvm~~n~ 606 (1096)
T TIGR00927 550 RE---ILNLTWWPLFRDVSFYILDLMMLILFFLDSLIAWWESLLLLLAYALYVFTMKWNK 606 (1096)
T ss_pred cc---cccccccceehhHHHHHHHHHHHHHHHhCCeEcHHHHHHHHHHHHHHHHHHHHhH
Confidence 32 22222 223455555555555545567999999999999999999998887765
No 16
>KOG2399 consensus K+-dependent Na+:Ca2+ antiporter [Inorganic ion transport and metabolism]
Probab=99.78 E-value=5.4e-18 Score=171.24 Aligned_cols=302 Identities=18% Similarity=0.169 Sum_probs=215.1
Q ss_pred HHHHHhHHHHHHHHHHHHHHhC--ChhHHHHHHHhh-hHHHHHHHHHHhhC-CcchhHHHHhHHHHHHHHHHHHHHHHhh
Q 017989 12 LGLTPLAERVSFLTEQIAFYTG--PTVGGLLNATCG-NATELIIAIFALYG-RKIDVVKYSLLGSILSNLLLVLGTSLFC 87 (362)
Q Consensus 12 ~~i~~~a~~~~~~~e~l~~~~g--~~~~g~~~~a~g-s~pEl~v~i~a~~~-g~~~ia~g~iiGS~i~nlllilGl~~l~ 87 (362)
.....+.++|+.+.+.+++++. |.+.|+++.++| ..|+++.++.|... .++|.+.++.+|+.++-..++.|+-.+.
T Consensus 117 ~l~~~a~~yFspsL~~is~~L~l~esvAGVTlLa~GNgapDvf~siasv~~~~~~~~~~~~~lg~alFVt~~V~G~i~~t 196 (605)
T KOG2399|consen 117 LLGITADDYFSPSLSSISSLLRLSESVAGVTLLAFGNGAPDVFASIASVRGTPKGDLALNDLLGGALFVTTVVVGLIILT 196 (605)
T ss_pred HHHHHHHHhcChHHHHHHHHhcCCCceeeEEEeeecCCCchHHhhhheeecCCCcccHHHHHhccceeEEeeEeeeeeee
Confidence 3455689999999999999998 999999999999 69999999888765 3458999999999999999999987776
Q ss_pred cccccCcceeeechhhhhHHHHHHHHHHHHHHHHHHhhhhhccccchhhhhhHHHHHHHHHHHHHHHHHHHhhc------
Q 017989 88 GGIANLRKEQKYDRKQADVNSLLLLLALLCHMLPLLFKYAAASSDITAKATLQLSRASSIVMLIGYFAYLVFQL------ 161 (362)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~ll~is~l~l~lp~~~~~~~~~~~~~~~~~~~is~~~~~ill~~Y~~yl~~~~------ 161 (362)
+|.+.+..-..||-..+ + .+...+.. +.. ...+++.+.+...+..|..|+....
T Consensus 197 ---~pFki~~~~~iRDi~Fl--l--~al~~l~~---~~~----------~~~~v~~~~~l~fl~~y~~Yv~~vi~~~~~~ 256 (605)
T KOG2399|consen 197 ---KPFKINANSFIRDILFL--L--LALLFLAF---ILL----------RGNKVEIWMALTFLGIYVVYVVTVIVLLSAR 256 (605)
T ss_pred ---cceeeccchhHHHHHHH--H--HHHHHHHH---HHh----------cCCceeHHhHHHHhHHHHHHHHHHHHHHHHH
Confidence 55456666566663222 1 22111111 110 1126677888888888988877322
Q ss_pred -ccccc---------------cccc-----cCCCCCC-------------------------------------------
Q 017989 162 -WTHRE---------------FFEA-----QEDSEDD------------------------------------------- 177 (362)
Q Consensus 162 -~~~~~---------------~~~~-----~~~~~~~------------------------------------------- 177 (362)
+++++ .+++ +.++++|
T Consensus 257 i~~~~r~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 336 (605)
T KOG2399|consen 257 IRKDRRKRFLELTPLRDMEESLFEALSVEPSIEEDEEELLRETHTHRFSGHDQMSNRAWTRIEIIYANNRNQDLFSDFFR 336 (605)
T ss_pred HHHHhhcchhccCCCcccchhhhcccccCCccccccchhhhhcCCCcccchhhhhhhhHHHHhhcccccchHHHHHHHHh
Confidence 22221 1220 0000000
Q ss_pred -----CC-------------------------------CC-CC-------------------------------------
Q 017989 178 -----DD-------------------------------VT-EE------------------------------------- 183 (362)
Q Consensus 178 -----~~-------------------------------~~-~~------------------------------------- 183 (362)
+. .+ |.
T Consensus 337 ~~~~~~~~~~~~~~~~~~kv~~~i~~p~~l~~~LtIP~v~~~~~Wsk~l~~~~~~~~P~~l~~~i~~~~~~~~~~~~~~~ 416 (605)
T KOG2399|consen 337 HLRPWDSDEEFYEMNILTKVLLIIKIPLVLLLRLTIPVVDSELSWSKPLNLLQVVLAPLLLLFLIQSLLYSISQGSPGLY 416 (605)
T ss_pred ccCCCCchhhhhhhhHHHHHHHHHhhhHhhhheeeecccCccccHHHHHHHHHHHHHHHHHHHHHHHhccccccccchHH
Confidence 00 00 00
Q ss_pred -------------------CCccc----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcchhhhhhhhccccch
Q 017989 184 -------------------TPVIG----FWSGFAWLVGMTAIIALLSEFVVGTIEDASNSWGISVSFISIILLPIVGNAA 240 (362)
Q Consensus 184 -------------------~~~~~----~~~~~~~l~~~~~~i~~~a~~lv~~~~~i~~~~gi~~~~iG~~l~al~tslP 240 (362)
.++++ .......++.+++|+...|..++..++.++.-+|+|+++.|+|+.|+|+|+.
T Consensus 417 ~~~l~is~~la~l~~~~t~~~~ppk~~~~v~~~~gF~mSi~wI~~~A~Eiv~vl~~lG~I~~ls~siLGLTv~AWgNSiG 496 (605)
T KOG2399|consen 417 LISLIISIPLAILAFFFTRLDKPPKFYHWVFSALGFLMSIAWIYLIANELVAVLTMLGVIFGLSPSILGLTVLAWGNSIG 496 (605)
T ss_pred HHHHHHHHHHHHHHHHhCcccCCCchHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHhccHH
Confidence 00111 1223356677899999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHhCCcchhHHHhhhHHHHHHHHHHHHHHHHHHhcCcceeecc----chhHHH-HHHHHHH--HHHHHhcCC
Q 017989 241 EHAGAIIFAFKNKLDISLGVALGSATQIAVFVVPLCVIISWIMGITMDLNF----NLLETG-SLALAII--ATAFTLQDG 313 (362)
Q Consensus 241 E~~~ai~aa~~g~~~~aig~~iGs~i~~~ll~lg~~~l~~~~~~~~~~l~~----~~~~~~-~l~~s~l--~~~~~~~~~ 313 (362)
|+++.+.-+++|.+.+|++.++|++++|.+..+|+...+....++|.+... ..+.+. .+.++.+ ++.+...+.
T Consensus 497 DLIAniavak~G~p~MAmaac~GGplfn~lvg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~fL~i~l~~slv~~~~~~f 576 (605)
T KOG2399|consen 497 DLIANIAVAKQGYPRMAMAACIGGPLFNLLVGLGLPLVISSLQGKPGNIVIPEDNSLRITLIFLLIGLLTSLVLIPTNRF 576 (605)
T ss_pred HHHHHHHHHHcCcHHHHHHHHhhhHHHHHHHHhhHHHHHHHHhcCCCceecccCCceehhHHHHHHHHHHHHHHHhcccc
Confidence 999999999999999999999999999999999999988877666654322 122222 2333333 233446788
Q ss_pred eehHHHHHHHHHHHHHHHHH
Q 017989 314 TSHYMKGFVLLLCYFVIGAC 333 (362)
Q Consensus 314 ~~~~~~g~~ll~~Y~~y~~~ 333 (362)
|.+|..|..|+.+|+.|...
T Consensus 577 ~~~r~~gi~L~~lyi~f~~~ 596 (605)
T KOG2399|consen 577 RLRRVLGIGLLSLYIAFTLI 596 (605)
T ss_pred eeccchhhHHHHHHHHHHHH
Confidence 99999999999999999433
No 17
>PF01699 Na_Ca_ex: Sodium/calcium exchanger protein; InterPro: IPR004837 The sodium/calcium exchangers are a family of integral membrane proteins. This domain covers the integral membrane regions of these proteins. Sodium/calcium exchangers regulate intracellular Ca2+ concentrations in many cells; cardiac myocytes, epithelial cells, neurons retinal rod photoreceptors and smooth muscle cells []. Ca2+ is moved into or out of the cytosol depending on Na+ concentration []. In humans and rats there are 3 isoforms; NCX1 NCX2 and NCX3 []. ; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 3V5U_A 3V5S_A.
Probab=99.77 E-value=3.5e-18 Score=143.94 Aligned_cols=132 Identities=27% Similarity=0.357 Sum_probs=103.0
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCcchhhhhhhhccccchhHHHHHHHHHhCCcchhHHHhhhHHHHHHHHHHHHHHHHHH
Q 017989 202 IIALLSEFVVGTIEDASNSWGISVSFISIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQIAVFVVPLCVIISW 281 (362)
Q Consensus 202 ~i~~~a~~lv~~~~~i~~~~gi~~~~iG~~l~al~tslPE~~~ai~aa~~g~~~~aig~~iGs~i~~~ll~lg~~~l~~~ 281 (362)
++..+++++++++|.+++++|+|+.+.|.+++|++||+||.++++.++++|++|+++|+++||+++|.++..|+..++++
T Consensus 2 ~i~~~a~~l~~~~~~i~~~~~i~~~~~g~~lla~~~slpe~~~~~~~~~~g~~~la~~~~~Gs~~~~~~l~~gl~~l~~~ 81 (140)
T PF01699_consen 2 LIIVAAEFLVESVEIIAERLGISESFLGLTLLALATSLPELIVAISAARKGNPDLAIGNIIGSNIFNITLIVGLILLFGP 81 (140)
T ss_dssp HHHHHHHHHHHHHHHHHCCCTB-HCCHHHCCHHCCCCHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHTHHHHHHHHS-
T ss_pred EehHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHcCHHHHHHHHHHhhccccchhhhcccchHHHHHHHHHHHHHHhcc
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred hcCcceeecc--chhHHHHHHHHHHHHHHHh----cCCeehHHHHHHHHHHHHHHHHH
Q 017989 282 IMGITMDLNF--NLLETGSLALAIIATAFTL----QDGTSHYMKGFVLLLCYFVIGAC 333 (362)
Q Consensus 282 ~~~~~~~l~~--~~~~~~~l~~s~l~~~~~~----~~~~~~~~~g~~ll~~Y~~y~~~ 333 (362)
...++...+. ...+...+.++..+...+. +++|.++++|.+++.+|+.|+..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~y~~y~~~ 139 (140)
T PF01699_consen 82 IKLGSQTIDWSSFTRDFSFLLLAILLLILFFLAFIRDGRISRFEGLVLLILYILYLVF 139 (140)
T ss_dssp B---------HHHHHHHHHHHHHHHHHHHCCT---HCT-BSHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccchHHHHHHHHHHHHHHHHHHHHHHHcCCeEhHHHHHHHHHHHHHHHhc
Confidence 5322211122 2233334444444444433 48999999999999999999874
No 18
>PLN03151 cation/calcium exchanger; Provisional
Probab=99.68 E-value=2e-16 Score=162.43 Aligned_cols=131 Identities=13% Similarity=0.165 Sum_probs=110.2
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCcchhhhhhhhccccchhHHHHHHHHHh-CCcchhHHHhhhHHHHHHHHHHHHHHHHHH
Q 017989 203 IALLSEFVVGTIEDASNSWGISVSFISIILLPIVGNAAEHAGAIIFAFK-NKLDISLGVALGSATQIAVFVVPLCVIISW 281 (362)
Q Consensus 203 i~~~a~~lv~~~~~i~~~~gi~~~~iG~~l~al~tslPE~~~ai~aa~~-g~~~~aig~~iGs~i~~~ll~lg~~~l~~~ 281 (362)
-..++++++++++.+++++++||.+.|+|++|+||+.||.++++.+..+ ++.|+++|+++||+++|++++.|..+++.+
T Consensus 155 ~~ta~dyF~p~l~~Is~~L~lse~vAGvTlLAfGNsaPDlf~si~a~~~~~~~~l~ig~ilGs~lf~~~vV~G~v~l~~~ 234 (650)
T PLN03151 155 GNTAADYFCCSLEKLSKLLRLPPTVAGVTLLPLGNGAPDVFASIAAFVGKDAGEVGLNSVLGGAVFVTCVVVGIVSLCVA 234 (650)
T ss_pred HHHHHHHhhHHHHHHHHHhCCCHHHHHHHHHHHhCCcHHHHHHHHHHHcCCCCceeeehhhhHHHHHHHHHHHHHHHhcc
Confidence 3678999999999999999999999999999999999999999988765 678999999999999999999999988752
Q ss_pred hcCcceeecc--chhHHHHHHHHHHHHHHHhcCCeehHHHHHHHHHHHHHHHHHHH
Q 017989 282 IMGITMDLNF--NLLETGSLALAIIATAFTLQDGTSHYMKGFVLLLCYFVIGACFF 335 (362)
Q Consensus 282 ~~~~~~~l~~--~~~~~~~l~~s~l~~~~~~~~~~~~~~~g~~ll~~Y~~y~~~~~ 335 (362)
.+|+..+. -.+|...+++++.+..+++.+|++++++|+.++.+|++|++...
T Consensus 235 --~~pf~v~~~~f~RD~~F~lla~~~l~~~l~~g~v~~~eai~ll~lY~~Yv~vv~ 288 (650)
T PLN03151 235 --DKEVQIDKRCFIRDLCFFLFTLVSLLVILMVGKVTVGGAIAFVSIYVVYAFLVA 288 (650)
T ss_pred --CCceeecchhHHHhHHHHHHHHHHHHHHHHcCeEhHHHHHHHHHHHHHHHHHHH
Confidence 12444433 34566656666555556678999999999999999999996654
No 19
>TIGR00846 caca2 calcium/proton exchanger. This model is generated from the calcium ion/proton exchangers of the CacA family.
Probab=99.66 E-value=1.6e-15 Score=147.48 Aligned_cols=142 Identities=22% Similarity=0.188 Sum_probs=108.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcchhhhhhhhccccchhHHHHHHHHHhCCcchhHHHhhhHHHHHHHHHH
Q 017989 194 AWLVGMTAIIALLSEFVVGTIEDASNSWGISVSFISIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQIAVFVV 273 (362)
Q Consensus 194 ~~l~~~~~~i~~~a~~lv~~~~~i~~~~gi~~~~iG~~l~al~tslPE~~~ai~aa~~g~~~~aig~~iGs~i~~~ll~l 273 (362)
..++.+++.+..++++++++.+.+++++|.| +|.++++.+||+||+++++.++.+|++|++.||++|||+.|+++++
T Consensus 38 ~~F~~~~~~li~~a~~lv~~a~~lA~~~G~~---vG~ll~a~~ts~pEL~vsi~A~~~g~~~la~gnivGS~i~NilLIl 114 (365)
T TIGR00846 38 VIFLLNLLGIIPLAERVSFATEQLAHRLGPT---LGGLLNATFGNAVELIISLMALGEGKVEVVRASLLGSILSNLLLVL 114 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc---hhhHHHHHHhHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHH
Confidence 3556788889999999999999999999988 6667779999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCcceeeccchhHH----HHHHHHHHHHH---H--HhcCC-----eehHHHHHHHHHHHHHHHHHHHHcCC
Q 017989 274 PLCVIISWIMGITMDLNFNLLET----GSLALAIIATA---F--TLQDG-----TSHYMKGFVLLLCYFVIGACFFVSNR 339 (362)
Q Consensus 274 g~~~l~~~~~~~~~~l~~~~~~~----~~l~~s~l~~~---~--~~~~~-----~~~~~~g~~ll~~Y~~y~~~~~~~~~ 339 (362)
|+..++++...++ +..++.... .++.++++... . ...++ .++|.+|.+++.+|++|+.+.++..+
T Consensus 115 Gl~~l~~~~~~~~-~~~~~~~~~~~~~~ll~~~~~~l~lp~~~~~~~~~~~~~~~ls~~~giill~ly~~yl~~~~~~~~ 193 (365)
T TIGR00846 115 GLSLFLGGIKNIR-EQRFNRGAAQVNSALLLLAILSLVLPLALPAGKPGQDSILGLSRGIAIVMLILYGAFLVFQLVTHR 193 (365)
T ss_pred HHHHHHhccCccc-eeeccHHHHHHHHHHHHHHHHHHHhhhHHhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhccch
Confidence 9999988653211 111222221 12222222111 1 11343 58999999999999999998776444
No 20
>TIGR00378 cax calcium/proton exchanger (cax).
Probab=99.65 E-value=1.9e-15 Score=146.30 Aligned_cols=141 Identities=16% Similarity=0.126 Sum_probs=109.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcchhhhhhhhccccchhHHHHHHHHHhCCcchhHHHhhhHHHHHHHHHH
Q 017989 194 AWLVGMTAIIALLSEFVVGTIEDASNSWGISVSFISIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQIAVFVV 273 (362)
Q Consensus 194 ~~l~~~~~~i~~~a~~lv~~~~~i~~~~gi~~~~iG~~l~al~tslPE~~~ai~aa~~g~~~~aig~~iGs~i~~~ll~l 273 (362)
..++.+.+.+...+++++++.+.+++++| +.+.|++..++|| +||+++++.|+++|+.|++.||++|||++|+++++
T Consensus 20 ~~F~~~~~aiipla~~l~~~~~~lA~~~g--~~vggl~~~~~gt-~pEL~vsi~A~~~g~~~i~~gnivGS~i~NllLil 96 (349)
T TIGR00378 20 LTFLFNFLAIIPLAAIMGNATEELADKAG--PTIGGLLNATFGN-AVELIVSIIALKEGLVRIVQASLTGSLLGNLLLVL 96 (349)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcC--chHHHHHHHhhcc-HHHHHHHHHHHHcCChhhhHHHHHHHHHHhHHHHH
Confidence 45667888889999999999999999999 8999999999999 99999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCcceeeccc--hhHHHHHHHHHHHHHHH------h---cCC---eehHHHHHHHHHHHHHHHHHHHHc
Q 017989 274 PLCVIISWIMGITMDLNFN--LLETGSLALAIIATAFT------L---QDG---TSHYMKGFVLLLCYFVIGACFFVS 337 (362)
Q Consensus 274 g~~~l~~~~~~~~~~l~~~--~~~~~~l~~s~l~~~~~------~---~~~---~~~~~~g~~ll~~Y~~y~~~~~~~ 337 (362)
|+..++++...++-..+.+ .....++.++++...+. . .|+ .++|.+|++++.+|++|+.+.++.
T Consensus 97 Gls~liggl~~~~q~~~~~~a~~~~~ll~la~~~l~lp~~~~~~~~~~~~~~~~~ls~~~aiill~lY~~~L~~~l~~ 174 (349)
T TIGR00378 97 GLCFFFGGLNYKQQTFNQTAARTNSSLLAIACVALLIPAARATLSHGKEDGKILNLSRGTSIVIIIVYVLFLYFQLGT 174 (349)
T ss_pred HHHHHHhccccceeecCHHHHHHHHHHHHHHHHHHHhhhHHHhcCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 9999988653222221111 11122233332222111 0 133 588899999999999999887654
No 21
>TIGR00845 caca sodium/calcium exchanger 1. This model is specific for the eukaryotic sodium ion/calcium ion exchangers of the Caca family
Probab=99.64 E-value=1.6e-15 Score=158.62 Aligned_cols=147 Identities=15% Similarity=0.247 Sum_probs=113.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcchhhhhhhhccccchhHHHHHHHHHhCC-cchhHHHhhhHHHH
Q 017989 189 FWSGFAWLVGMTAIIALLSEFVVGTIEDASNSWGISVSFISIILLPIVGNAAEHAGAIIFAFKNK-LDISLGVALGSATQ 267 (362)
Q Consensus 189 ~~~~~~~l~~~~~~i~~~a~~lv~~~~~i~~~~gi~~~~iG~~l~al~tslPE~~~ai~aa~~g~-~~~aig~~iGs~i~ 267 (362)
.|..+..++++++++.+.+..+++.+..+++.+|+|++++|++++|+|||+||+++++.++++|+ .|+|+||++|||++
T Consensus 752 ~~~g~~~f~~sI~~Ig~l~~~i~~~a~~ig~~~gi~~~viGlt~vA~GTSlPEl~~S~~aA~~~~~~d~aigNv~GSNif 831 (928)
T TIGR00845 752 YWGGWACFVVSILMIGVLTAFIGDLASHFGCTIGLKDSVTAVVFVALGTSVPDTFASKVAATQDQYADASIGNVTGSNAV 831 (928)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHhhhheeeeEecCcHHHHHHHHHHHcCCCCceeEEeecchHHH
Confidence 45566788889999999999999999999999999999999999999999999999999999976 99999999999999
Q ss_pred HHHHHHHHHHHHHHh----cCcceeeccc--hhHHH-HHHHHHHHHHH-HhcCC-----------eehHHHHHHHHHHHH
Q 017989 268 IAVFVVPLCVIISWI----MGITMDLNFN--LLETG-SLALAIIATAF-TLQDG-----------TSHYMKGFVLLLCYF 328 (362)
Q Consensus 268 ~~ll~lg~~~l~~~~----~~~~~~l~~~--~~~~~-~l~~s~l~~~~-~~~~~-----------~~~~~~g~~ll~~Y~ 328 (362)
|+++++|+.+++.+. .+.|+..... .++.. ++.++++.... .+|+. ..++..+..++.+++
T Consensus 832 Ni~l~lGv~~~i~~~~~~~~~~~~~V~~~~l~~~v~l~~~~a~l~~~vl~~rr~~~~g~elggp~~~~~~~~~~~~~lw~ 911 (928)
T TIGR00845 832 NVFLGIGVAWSIAAIYHAANGTQFKVSPGTLAFSVTLFTIFAFICIGVLLYRRRPEIGGELGGPRTAKLLTSALFVLLWL 911 (928)
T ss_pred HHHHHHHHHHHHhhhhhcccCceEEECccchhHHHHHHHHHHHHHHHHHHHhhcccccceeCCCCCcchhhhHHHHHHHH
Confidence 999999999998853 2345444432 23332 22333332222 22321 234567888888888
Q ss_pred HHHHHHH
Q 017989 329 VIGACFF 335 (362)
Q Consensus 329 ~y~~~~~ 335 (362)
.|+...-
T Consensus 912 ~y~~~s~ 918 (928)
T TIGR00845 912 LYILFSS 918 (928)
T ss_pred HHHHHHH
Confidence 8886543
No 22
>KOG1307 consensus K+-dependent Ca2+/Na+ exchanger NCKX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.57 E-value=1.7e-15 Score=145.05 Aligned_cols=130 Identities=21% Similarity=0.335 Sum_probs=114.0
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCcchhhhhhhhccccchhHHHHHHHHHhCCcchhHHHhhhHHHHHHHHHHHHHHHHHH
Q 017989 202 IIALLSEFVVGTIEDASNSWGISVSFISIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQIAVFVVPLCVIISW 281 (362)
Q Consensus 202 ~i~~~a~~lv~~~~~i~~~~gi~~~~iG~~l~al~tslPE~~~ai~aa~~g~~~~aig~~iGs~i~~~ll~lg~~~l~~~ 281 (362)
+..++-+++|.+++.+.+++|+|+-+.|.|++|.|+|.||+++++..+.--+.|+.+|.++||++||+++++|.+.+++.
T Consensus 71 LAIVCDefFVPSL~vItEkL~iSdDVAGATFMAAGgSAPElFTSvIGVFIt~~dVGiGTIVGSAvFNIL~Vig~C~LFSr 150 (588)
T KOG1307|consen 71 LAIVCDEFFVPSLDVITEKLGISDDVAGATFMAAGGSAPELFTSVIGVFITQGDVGIGTIVGSAVFNILCVIGVCGLFSR 150 (588)
T ss_pred HHHHhcccccccHHHHHHHhcCcccccchhhhhccCCchHHhhhheeEEEecCCcceeeeeehhhhhHHHHHHHHHhhcc
Confidence 33568899999999999999999999999999999999999999999988889999999999999999999999999973
Q ss_pred hcCcceeeccc--hhHHHHHHHHHHHHHHHhcCCeehHHHHHHHHHHHHHHHHHH
Q 017989 282 IMGITMDLNFN--LLETGSLALAIIATAFTLQDGTSHYMKGFVLLLCYFVIGACF 334 (362)
Q Consensus 282 ~~~~~~~l~~~--~~~~~~l~~s~l~~~~~~~~~~~~~~~g~~ll~~Y~~y~~~~ 334 (362)
+.+++... .+|.....++++...+++.|.++.|||+++|+..|+.|+..+
T Consensus 151 ---qvl~LtWWPLfRD~sfY~lsl~~Li~Ff~D~~I~WwEaL~L~~~Yi~Yv~~M 202 (588)
T KOG1307|consen 151 ---QVLNLTWWPLFRDVSFYTLSLIMLIYFFLDELIMWWEALALLLMYISYVVFM 202 (588)
T ss_pred ---cccccccchhhhhhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHheee
Confidence 34444433 345556778888888888999999999999999999998654
No 23
>PF01699 Na_Ca_ex: Sodium/calcium exchanger protein; InterPro: IPR004837 The sodium/calcium exchangers are a family of integral membrane proteins. This domain covers the integral membrane regions of these proteins. Sodium/calcium exchangers regulate intracellular Ca2+ concentrations in many cells; cardiac myocytes, epithelial cells, neurons retinal rod photoreceptors and smooth muscle cells []. Ca2+ is moved into or out of the cytosol depending on Na+ concentration []. In humans and rats there are 3 isoforms; NCX1 NCX2 and NCX3 []. ; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 3V5U_A 3V5S_A.
Probab=99.51 E-value=5.7e-14 Score=118.18 Aligned_cols=136 Identities=32% Similarity=0.325 Sum_probs=95.8
Q ss_pred HHHHHhHHHHHHHHHHHHHHhC--ChhHHHHHHHhh-hHHHHHHHHHHhhCCcchhHHHHhHHHHHHHHHHHHHHHHhhc
Q 017989 12 LGLTPLAERVSFLTEQIAFYTG--PTVGGLLNATCG-NATELIIAIFALYGRKIDVVKYSLLGSILSNLLLVLGTSLFCG 88 (362)
Q Consensus 12 ~~i~~~a~~~~~~~e~l~~~~g--~~~~g~~~~a~g-s~pEl~v~i~a~~~g~~~ia~g~iiGS~i~nlllilGl~~l~~ 88 (362)
+++..+++++.+..|.+++++| +.+.|.++.+++ |+||+++++.++.+|+++++.|+++||+++|++++.|++.+.+
T Consensus 1 i~i~~~a~~l~~~~~~i~~~~~i~~~~~g~~lla~~~slpe~~~~~~~~~~g~~~la~~~~~Gs~~~~~~l~~gl~~l~~ 80 (140)
T PF01699_consen 1 ILIIVAAEFLVESVEIIAERLGISESFLGLTLLALATSLPELIVAISAARKGNPDLAIGNIIGSNIFNITLIVGLILLFG 80 (140)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCTB-HCCHHHCCHHCCCCHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHTHHHHHHHHS
T ss_pred CEehHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHcCHHHHHHHHHHhhccccchhhhcccchHHHHHHHHHHHHHHhc
Confidence 3578899999999999999888 788888888888 9999999999999999999999999999999999999999997
Q ss_pred ccccCcceeeechhhhhHHHHHHHHHHHHHHHHHHhhhhhccccchhhhhhHHHHHHHHHHHHHHHHHHHh
Q 017989 89 GIANLRKEQKYDRKQADVNSLLLLLALLCHMLPLLFKYAAASSDITAKATLQLSRASSIVMLIGYFAYLVF 159 (362)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~ll~is~l~l~lp~~~~~~~~~~~~~~~~~~~is~~~~~ill~~Y~~yl~~ 159 (362)
..+. .+++.+.........++.++.+.+.. +.... ...++++++.+++++.+|+.|+++
T Consensus 81 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-------~~~~~~~~~~~~~ll~~y~~y~~~ 139 (140)
T PF01699_consen 81 PIKL--GSQTIDWSSFTRDFSFLLLAILLLIL---FFLAF-------IRDGRISRFEGLVLLILYILYLVF 139 (140)
T ss_dssp -B-----------HHHHHHHHHHHHHHHHHHH---CCT----------HCT-BSHHHHHHHHHHHHHHHHH
T ss_pred cccc--cccccccchHHHHHHHHHHHHHHHHH---HHHHH-------HcCCeEhHHHHHHHHHHHHHHHhc
Confidence 6542 22222222222222222222221111 11000 123678899999999999999875
No 24
>TIGR00845 caca sodium/calcium exchanger 1. This model is specific for the eukaryotic sodium ion/calcium ion exchangers of the Caca family
Probab=99.40 E-value=7.7e-13 Score=138.78 Aligned_cols=90 Identities=18% Similarity=0.160 Sum_probs=84.6
Q ss_pred CcchhHHHHHHHHHHhHHHHHHHHHHHHHHhC--ChhHHHHHHHhh-hHHHHHHHHHHhhCCc-chhHHHHhHHHHHHHH
Q 017989 2 MQPWVFALSLLGLTPLAERVSFLTEQIAFYTG--PTVGGLLNATCG-NATELIIAIFALYGRK-IDVVKYSLLGSILSNL 77 (362)
Q Consensus 2 ~~~~~F~~~~~~i~~~a~~~~~~~e~l~~~~g--~~~~g~~~~a~g-s~pEl~v~i~a~~~g~-~~ia~g~iiGS~i~nl 77 (362)
.+|+.|+++++.|......+++.+..+++.+| +.+.|++++++| |+||+++++.|+.+++ .|+++||++|||++|+
T Consensus 754 ~g~~~f~~sI~~Ig~l~~~i~~~a~~ig~~~gi~~~viGlt~vA~GTSlPEl~~S~~aA~~~~~~d~aigNv~GSNifNi 833 (928)
T TIGR00845 754 GGWACFVVSILMIGVLTAFIGDLASHFGCTIGLKDSVTAVVFVALGTSVPDTFASKVAATQDQYADASIGNVTGSNAVNV 833 (928)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHhhhheeeeEecCcHHHHHHHHHHHcCCCCceeEEeecchHHHHH
Confidence 46889999999999999999999999999999 899999999999 9999999999999976 9999999999999999
Q ss_pred HHHHHHHHhhcccc
Q 017989 78 LLVLGTSLFCGGIA 91 (362)
Q Consensus 78 llilGl~~l~~~~~ 91 (362)
++++|+++++.+++
T Consensus 834 ~l~lGv~~~i~~~~ 847 (928)
T TIGR00845 834 FLGIGVAWSIAAIY 847 (928)
T ss_pred HHHHHHHHHHhhhh
Confidence 99999999987543
No 25
>KOG2399 consensus K+-dependent Na+:Ca2+ antiporter [Inorganic ion transport and metabolism]
Probab=98.90 E-value=1.2e-09 Score=111.21 Aligned_cols=128 Identities=21% Similarity=0.204 Sum_probs=107.6
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCcchhhhhhhhccccchhHHHHHHHHHhC-CcchhHHHhhhHHHHHHHHHHHHHHHHHH
Q 017989 203 IALLSEFVVGTIEDASNSWGISVSFISIILLPIVGNAAEHAGAIIFAFKN-KLDISLGVALGSATQIAVFVVPLCVIISW 281 (362)
Q Consensus 203 i~~~a~~lv~~~~~i~~~~gi~~~~iG~~l~al~tslPE~~~ai~aa~~g-~~~~aig~~iGs~i~~~ll~lg~~~l~~~ 281 (362)
...+.+++..+++.+++.+.+||++.|+|++|+|+..||.+.++++.+.. +.|+++++++|+.+|..+++.|+..+..+
T Consensus 119 ~~~a~~yFspsL~~is~~L~l~esvAGVTlLa~GNgapDvf~siasv~~~~~~~~~~~~~lg~alFVt~~V~G~i~~t~p 198 (605)
T KOG2399|consen 119 GITADDYFSPSLSSISSLLRLSESVAGVTLLAFGNGAPDVFASIASVRGTPKGDLALNDLLGGALFVTTVVVGLIILTKP 198 (605)
T ss_pred HHHHHHhcChHHHHHHHHhcCCCceeeEEEeeecCCCchHHhhhheeecCCCcccHHHHHhccceeEEeeEeeeeeeecc
Confidence 45678999999999999999999999999999999999999999988754 45899999999999999999999988875
Q ss_pred hcCcceeeccchhHHHHHHHHHHHHHHHhcCC-eehHHHHHHHHHHHHHHHHH
Q 017989 282 IMGITMDLNFNLLETGSLALAIIATAFTLQDG-TSHYMKGFVLLLCYFVIGAC 333 (362)
Q Consensus 282 ~~~~~~~l~~~~~~~~~l~~s~l~~~~~~~~~-~~~~~~g~~ll~~Y~~y~~~ 333 (362)
+ +++.....+|...++.+.....+...++ +.+.|.+...+..|..|+..
T Consensus 199 F---ki~~~~~iRDi~Fll~al~~l~~~~~~~~~v~~~~~l~fl~~y~~Yv~~ 248 (605)
T KOG2399|consen 199 F---KINANSFIRDILFLLLALLFLAFILLRGNKVEIWMALTFLGIYVVYVVT 248 (605)
T ss_pred e---eeccchhHHHHHHHHHHHHHHHHHHhcCCceeHHhHHHHhHHHHHHHHH
Confidence 3 3444445677777777766665555444 99999999999999999864
No 26
>KOG1306 consensus Ca2+/Na+ exchanger NCX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.89 E-value=3.3e-10 Score=109.84 Aligned_cols=159 Identities=11% Similarity=0.122 Sum_probs=115.1
Q ss_pred CCcchhHHHHHHHHHHhHHHHHHHHHHHHHHhC--ChhHHHHHHHhh-hHHHHHHHHHHhhCCc-chhHHHHhHHHHHHH
Q 017989 1 MMQPWVFALSLLGLTPLAERVSFLTEQIAFYTG--PTVGGLLNATCG-NATELIIAIFALYGRK-IDVVKYSLLGSILSN 76 (362)
Q Consensus 1 ~~~~~~F~~~~~~i~~~a~~~~~~~e~l~~~~g--~~~~g~~~~a~g-s~pEl~v~i~a~~~g~-~~ia~g~iiGS~i~n 76 (362)
|.+|..|+++++.|-.....+++.+...+...| +.+..++++++| |+|+.+.+-+|+.+++ +|-.+||+.|||-.|
T Consensus 425 ~~Gw~cFvvsi~~Igl~ta~igd~as~fgC~vglkdsVtA~~~vA~GTS~PDtfASkiAA~~d~~AD~~igNvTgSNaVN 504 (596)
T KOG1306|consen 425 CHGWACFVVSILFIGLLTAVIGDLASHFGCTVGLKDSVTAVTFVALGTSVPDTFASKIAAEQDQTADASIGNVTGSNAVN 504 (596)
T ss_pred cCccHHHHHHHHHHHHHHHHHHHHHHhhceeecCccceeeeeeehhcCCCcHHHHHHHHHhhcccccccccceeccccee
Confidence 568999999999999999999999999999999 899999999999 9999999999998876 799999999999999
Q ss_pred HHHHHHHHHhhcccccCcceeeechhhhhHHHHHHHHHHHHHHHHHHhh--hhhccccchhhhhhHHHHHHHHHHHHHHH
Q 017989 77 LLLVLGTSLFCGGIANLRKEQKYDRKQADVNSLLLLLALLCHMLPLLFK--YAAASSDITAKATLQLSRASSIVMLIGYF 154 (362)
Q Consensus 77 lllilGl~~l~~~~~~~~~~~~~~~~~~~~~~~ll~is~l~l~lp~~~~--~~~~~~~~~~~~~~~is~~~~~ill~~Y~ 154 (362)
+.+.+|++|.++...+-...+.+......+.++..++...+++...++. .-..+.+.. ....-....+.+++.+++
T Consensus 505 vflGiG~aW~iaavy~a~~g~~f~v~~g~l~FsvtlF~i~s~~~i~vl~~RR~~iggELG--GP~~~k~~ta~~fv~lW~ 582 (596)
T KOG1306|consen 505 VFLGIGLAWSIAAVYWAAQGEPFYVEAGTLAFSVTLFTIFSVVCIVVLVYRRPHIGGELG--GPRGWKLLTAALFVSLWL 582 (596)
T ss_pred EEEeccHHHHHHHHHHHhcCceEEeccceeeeehHHHHHHHHHhheeeEEeccccCcccC--CcchHHHHHHHHHHHHHH
Confidence 9999999999987654334555555544343333222222221111111 111111111 112334466788888899
Q ss_pred HHHHhhc
Q 017989 155 AYLVFQL 161 (362)
Q Consensus 155 ~yl~~~~ 161 (362)
+|+.+..
T Consensus 583 ~yv~~s~ 589 (596)
T KOG1306|consen 583 LYVLLSS 589 (596)
T ss_pred HHHHHHH
Confidence 9888764
No 27
>KOG1306 consensus Ca2+/Na+ exchanger NCX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.73 E-value=1.6e-08 Score=98.41 Aligned_cols=142 Identities=13% Similarity=0.151 Sum_probs=107.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcchhhhhhhhccccchhHHHHHHHHHhCC-cchhHHHhhhHHHHHHHH
Q 017989 193 FAWLVGMTAIIALLSEFVVGTIEDASNSWGISVSFISIILLPIVGNAAEHAGAIIFAFKNK-LDISLGVALGSATQIAVF 271 (362)
Q Consensus 193 ~~~l~~~~~~i~~~a~~lv~~~~~i~~~~gi~~~~iG~~l~al~tslPE~~~ai~aa~~g~-~~~aig~~iGs~i~~~ll 271 (362)
+..++++++.|....-.+-+-.+.++...|+.+++.+++++|+|||+||.+.+-.||.+++ .|-++||+-|||-.|..+
T Consensus 428 w~cFvvsi~~Igl~ta~igd~as~fgC~vglkdsVtA~~~vA~GTS~PDtfASkiAA~~d~~AD~~igNvTgSNaVNvfl 507 (596)
T KOG1306|consen 428 WACFVVSILFIGLLTAVIGDLASHFGCTVGLKDSVTAVTFVALGTSVPDTFASKIAAEQDQTADASIGNVTGSNAVNVFL 507 (596)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhhceeecCccceeeeeeehhcCCCcHHHHHHHHHhhcccccccccceecccceeEEE
Confidence 4677888888888889999999999999999999999999999999999999999998776 799999999999999999
Q ss_pred HHHHHHHHHHh----cCcceeeccchh--HHHH-HHHHHHHHH-HHhcCCe----------ehHHHHHHHHHHHHHHHHH
Q 017989 272 VVPLCVIISWI----MGITMDLNFNLL--ETGS-LALAIIATA-FTLQDGT----------SHYMKGFVLLLCYFVIGAC 333 (362)
Q Consensus 272 ~lg~~~l~~~~----~~~~~~l~~~~~--~~~~-l~~s~l~~~-~~~~~~~----------~~~~~g~~ll~~Y~~y~~~ 333 (362)
.+|+.+.+... .|.|+..+.... .+.+ ...+++... +.+|+.. -++..+.+++.++++|+..
T Consensus 508 GiG~aW~iaavy~a~~g~~f~v~~g~l~FsvtlF~i~s~~~i~vl~~RR~~iggELGGP~~~k~~ta~~fv~lW~~yv~~ 587 (596)
T KOG1306|consen 508 GIGLAWSIAAVYWAAQGEPFYVEAGTLAFSVTLFTIFSVVCIVVLVYRRPHIGGELGGPRGWKLLTAALFVSLWLLYVLL 587 (596)
T ss_pred eccHHHHHHHHHHHhcCceEEeccceeeeehHHHHHHHHHhheeeEEeccccCcccCCcchHHHHHHHHHHHHHHHHHHH
Confidence 99999987643 355655443321 1111 222332221 2233321 2355677888888888865
Q ss_pred H
Q 017989 334 F 334 (362)
Q Consensus 334 ~ 334 (362)
.
T Consensus 588 s 588 (596)
T KOG1306|consen 588 S 588 (596)
T ss_pred H
Confidence 3
No 28
>PRK10599 calcium/sodium:proton antiporter; Provisional
Probab=98.69 E-value=4.4e-07 Score=87.53 Aligned_cols=137 Identities=13% Similarity=0.118 Sum_probs=102.5
Q ss_pred hHHHHHHHHHHhHHHHHHHHHHHHHHhC--ChhHHHHHHHhhhHHHHHHHHHHhhCCcchhHHHHhHHHHHHHHHHHHHH
Q 017989 6 VFALSLLGLTPLAERVSFLTEQIAFYTG--PTVGGLLNATCGNATELIIAIFALYGRKIDVVKYSLLGSILSNLLLVLGT 83 (362)
Q Consensus 6 ~F~~~~~~i~~~a~~~~~~~e~l~~~~g--~~~~g~~~~a~gs~pEl~v~i~a~~~g~~~ia~g~iiGS~i~nlllilGl 83 (362)
..+++.++++.+++.++...|...+.+| +.+.|++++.+++.||-.+++.++.+|+-|.+++-.+||.+.-.++....
T Consensus 226 ~L~v~lv~Vv~lAe~lv~sIe~~v~~~Glp~afiGvIIaiv~~apE~~tAV~aA~kNkmq~slnialGSsLq~illtvP~ 305 (366)
T PRK10599 226 WLIIHLIAVIAVTKMNASPLETLLTSMNAPVAFTGFLVALLILSPEGLGALKAVLNNQVQRAMNLFFGSVLATISLTVPV 305 (366)
T ss_pred HHHHHHHHHHHHHHHhHhhHHHHHHhcCCCHHHHHHHHHHHHcchhHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHH
Confidence 4566788899999999999999999999 78999998878899999999999999999999999999999888877777
Q ss_pred HHhhcccccCcceeeechhhhhHHHHHHHHHHHHHHHHHHhhhhhccccchhhhhhHHHHHHHHHHHHHHHHHHHhh
Q 017989 84 SLFCGGIANLRKEQKYDRKQADVNSLLLLLALLCHMLPLLFKYAAASSDITAKATLQLSRASSIVMLIGYFAYLVFQ 160 (362)
Q Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~~~ll~is~l~l~lp~~~~~~~~~~~~~~~~~~~is~~~~~ill~~Y~~yl~~~ 160 (362)
..+++..-..+..-.++..+ ..++.++++...+ + . ..++-++.+|..++.+|+.|+...
T Consensus 306 lvlig~~~g~pm~L~f~~~e----~vlL~ltv~v~~~------t------~--~dGrsN~LeG~~hL~lf~~y~~l~ 364 (366)
T PRK10599 306 VTLIAFLTGNELQFGLGAPE----MVVMVASLVLCHI------S------F--STGRTNVLNGAAHLALFAAYLMTI 364 (366)
T ss_pred HHHHHHHhCCCeEecCCHHH----HHHHHHHHHHHHh------c------c--CCCchHHHHHHHHHHHHHHHHHHH
Confidence 76665432111222333333 2233222221111 0 1 237889999999999999998754
No 29
>COG0387 ChaA Ca2+/H+ antiporter [Inorganic ion transport and metabolism]
Probab=98.29 E-value=2.1e-05 Score=75.37 Aligned_cols=137 Identities=20% Similarity=0.199 Sum_probs=99.6
Q ss_pred hhHHHHHHHHHHhHHHHHHHHHHHHHHhC--ChhHHHHHHHhh-hHHHHHHHHHHhhCCcchhHHHHhHHHHHHHHHHHH
Q 017989 5 WVFALSLLGLTPLAERVSFLTEQIAFYTG--PTVGGLLNATCG-NATELIIAIFALYGRKIDVVKYSLLGSILSNLLLVL 81 (362)
Q Consensus 5 ~~F~~~~~~i~~~a~~~~~~~e~l~~~~g--~~~~g~~~~a~g-s~pEl~v~i~a~~~g~~~ia~g~iiGS~i~nlllil 81 (362)
.+.+.+.+.+..+++.++...|...+.+| +.+.|++++++. +.||.++++.++.+|+.|.+++-..||.+-..++..
T Consensus 224 ~vLl~~tv~v~~lae~lv~~le~~l~~~g~~~~F~G~iIa~lVgn~~E~~tAi~aA~~~~mqls~nia~Gsalq~~llti 303 (368)
T COG0387 224 GVLLIATVLVALLAEILVGSLEAVLESLGAPPAFVGLIIAALVGNAPEHLTALRAALNNRMQLSMNIAMGSALQTALLTI 303 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhccCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Confidence 56778889999999999999999999999 789999999887 999999999999999999999999999777666555
Q ss_pred HHHHhhcccccCcceeeechhhhhHHHHHHHHHHHHHHHHHHhhhhhccccchhhhhhHHHHHHHHHHHHHHHHHHHh
Q 017989 82 GTSLFCGGIANLRKEQKYDRKQADVNSLLLLLALLCHMLPLLFKYAAASSDITAKATLQLSRASSIVMLIGYFAYLVF 159 (362)
Q Consensus 82 Gl~~l~~~~~~~~~~~~~~~~~~~~~~~ll~is~l~l~lp~~~~~~~~~~~~~~~~~~~is~~~~~ill~~Y~~yl~~ 159 (362)
..-.+++-. ..|..+..-......+++.+++.. ... . +.++-+|.+|..++.+|.+|..-
T Consensus 304 P~lvlis~~----~gqpm~l~~~~~elV~l~~~v~~~---~~~---------~--sdG~sn~leG~~lL~lya~~~~~ 363 (368)
T COG0387 304 PVLVLISLF----TGQPLTLGFGPPELVLLVVTVFLA---NIL---------F--SDGRTNWLEGVVLLALYAIYAML 363 (368)
T ss_pred HHHHHHHHH----hCCCccccCCHHHHHHHHHHHHHH---HHh---------c--CCCchHHHHHHHHHHHHHHHHHH
Confidence 444433321 112222221122233444333221 111 1 33788999999999999998753
No 30
>KOG1397 consensus Ca2+/H+ antiporter VCX1 and related proteins [Inorganic ion transport and metabolism]
Probab=98.12 E-value=8.4e-05 Score=71.08 Aligned_cols=137 Identities=23% Similarity=0.140 Sum_probs=99.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCcchhhhhhhhccccchhHHHHHHHHHhCCcchhHHHhhhHHHHHHHHHHHH
Q 017989 196 LVGMTAIIALLSEFVVGTIEDASNSWGISVSFISIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQIAVFVVPL 275 (362)
Q Consensus 196 l~~~~~~i~~~a~~lv~~~~~i~~~~gi~~~~iG~~l~al~tslPE~~~ai~aa~~g~~~~aig~~iGs~i~~~ll~lg~ 275 (362)
+..++..+.-.|+.+....|+++.+.| +++ |..+=|...+.-|++.++.|.++|+..+.=+..+||.+-|+++++|.
T Consensus 99 F~lsll~iiPLA~~l~~ateqls~~tg--~tv-GgllNAtfGnaiElii~ilALk~g~~riVq~SlLGSILsnlLLvlG~ 175 (441)
T KOG1397|consen 99 FLLSLLGIIPLAERLGFATEQLSAYTG--PTV-GGLLNATFGNAIELIIYILALKNGKVRIVQGSLLGSILSNLLLVLGL 175 (441)
T ss_pred HHHHHhhhhhHHHHHHHHHHHHHhhcC--CcH-HHHHhhhhccHHHHHHHHHHhhcCceEEEehhhHHHHHHHHHHHhhH
Confidence 456667777788999999999998875 444 44555666678899999999999999999999999999999999999
Q ss_pred HHHHHHhcCcceeeccc--hhHHH--HHHHHHH--HHH----HHhc----C-------CeehHHHHHHHHHHHHHHHHHH
Q 017989 276 CVIISWIMGITMDLNFN--LLETG--SLALAII--ATA----FTLQ----D-------GTSHYMKGFVLLLCYFVIGACF 334 (362)
Q Consensus 276 ~~l~~~~~~~~~~l~~~--~~~~~--~l~~s~l--~~~----~~~~----~-------~~~~~~~g~~ll~~Y~~y~~~~ 334 (362)
....+.+.++. ..|+ ..++. ++.++++ +.. +... | -.++|..+++++..|++|++..
T Consensus 176 s~~~Ggi~rk~--Q~Fn~~~A~v~s~lLl~a~l~~l~P~~l~~~~~~~~~~~~~~~~~l~lSr~~SivmliaYi~~L~Fq 253 (441)
T KOG1397|consen 176 SLFCGGIRRKD--QRFNIKSAGVNSALLLLAVLGILLPTVLHYTYGGEVHDCSSGGAILPLSRGCSIVMLIAYIAYLWFQ 253 (441)
T ss_pred HHhhcccccce--eecccchhhHHHHHHHHHHHHHHHHHHHHHhcCccccccCCccceeeehhccHHHHHHHHHHHHHHh
Confidence 87777654322 2333 22222 3333332 111 1111 1 1367889999999999999998
Q ss_pred HHc
Q 017989 335 FVS 337 (362)
Q Consensus 335 ~~~ 337 (362)
.+.
T Consensus 254 L~t 256 (441)
T KOG1397|consen 254 LKT 256 (441)
T ss_pred hhc
Confidence 887
No 31
>PRK11588 hypothetical protein; Provisional
Probab=36.22 E-value=5e+02 Score=26.74 Aligned_cols=29 Identities=7% Similarity=-0.089 Sum_probs=23.8
Q ss_pred hhHHHHHHHHHHhHHHHHHHHHHHHHHhC
Q 017989 5 WVFALSLLGLTPLAERVSFLTEQIAFYTG 33 (362)
Q Consensus 5 ~~F~~~~~~i~~~a~~~~~~~e~l~~~~g 33 (362)
.+++.+.+.++-...-+..+..++.++++
T Consensus 116 iliiGG~f~vi~~TGAi~~~i~~l~~k~~ 144 (506)
T PRK11588 116 MLVIGGAFGIVMRTGTIDNGILALIRKTR 144 (506)
T ss_pred hhHHhhHHHHHHHhchHHHHHHHHHHHhC
Confidence 45566788888888888999999999887
No 32
>PF03606 DcuC: C4-dicarboxylate anaerobic carrier; InterPro: IPR018385 Escherichia coli contains four different secondary carriers (DcuA, DcuB, DcuC, and DctA) for C4-dicarboxylates [, , , ] DcuA is used for aerobic growth on C4-dicarboxylates [, ], whereas the Dcu carriers (encoded by the dcuA, dcuB, and dcuC genes) are used under anaerobic conditions and form a distinct family of carriers [, , , , , ]. Each of the Dcu carriers is able to catalyze the uptake, antiport, and possibly also efflux of C4-dicarboxylates. DcuB is the major C4-dicarboxylate carrier for fumarate respiration with high fumarate-succinate exchange activity. It is synthesized only in the absence of oxygen and nitrate and in the presence of C4-dicarboxylates [, , , ]. DcuA is expressed constitutively in aerobic and anaerobic growth and can substitute for DcuB [, ]. These proteins are members of the C4-dicarboxylate Uptake C (DcuC) family. DcuC has 12 GES predicted transmembrane regions, is induced only under anaerobic conditions, and is not repressed by glucose. DcuC may therefore function as a succinate efflux system during anaerobic glucose fermentation. However, when overexpressed, it can replace either DcuA or DcuB in catalyzing fumarate-succinate exchange and fumarate uptake [, ]. DcuC shows the same transport modes as DcuA and DcuB (exchange, uptake, and presumably efflux of C4-dicarboxylates) [].; GO: 0016021 integral to membrane
Probab=35.37 E-value=2.7e+02 Score=28.13 Aligned_cols=15 Identities=7% Similarity=-0.248 Sum_probs=8.1
Q ss_pred HHHHHHHHHHHHHHH
Q 017989 192 GFAWLVGMTAIIALL 206 (362)
Q Consensus 192 ~~~~l~~~~~~i~~~ 206 (362)
.....+..++++..+
T Consensus 256 ~~~~~~l~~~~li~g 270 (465)
T PF03606_consen 256 YLLLPVLPFVLLIYG 270 (465)
T ss_pred eehHHHHHHHHHHhc
Confidence 344555566666554
No 33
>PF03616 Glt_symporter: Sodium/glutamate symporter; InterPro: IPR004445 This is a family of sodium/glutamate symporters (glutamate permeases), which catalyse the sodium-dependent uptake of extracellular glutamate. The protein is located in the inner membrane.; GO: 0015501 glutamate:sodium symporter activity, 0015813 L-glutamate transport, 0016021 integral to membrane
Probab=32.99 E-value=4.8e+02 Score=25.54 Aligned_cols=13 Identities=8% Similarity=0.038 Sum_probs=8.7
Q ss_pred HHHHHHHHHHHHH
Q 017989 318 MKGFVLLLCYFVI 330 (362)
Q Consensus 318 ~~g~~ll~~Y~~y 330 (362)
+++.++..-++.+
T Consensus 335 ydaavm~~G~~G~ 347 (368)
T PF03616_consen 335 YDAAVMSAGFCGF 347 (368)
T ss_pred hhHHHHhhhhhcc
Confidence 5777777666654
No 34
>PLN00082 photosystem II reaction centre W protein (PsbW); Provisional
Probab=32.08 E-value=65 Score=23.06 Aligned_cols=31 Identities=16% Similarity=0.176 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCCCccc
Q 017989 318 MKGFVLLLCYFVIGACFFVSNRPLDSDPNGV 348 (362)
Q Consensus 318 ~~g~~ll~~Y~~y~~~~~~~~~~~~~~~~~~ 348 (362)
.-|.+|+.++......++.+.+..+++++|+
T Consensus 33 ~LgwIL~gvf~liw~ly~~~~~~l~~~deDs 63 (67)
T PLN00082 33 KLTWILVGVTALIWALYFSYSSTLPEGDDDS 63 (67)
T ss_pred hhhhHHHHHHHHHHHHHhheecccCCCCccc
Confidence 4566777777776666666666666655554
No 35
>PRK10921 twin-arginine protein translocation system subunit TatC; Provisional
Probab=28.96 E-value=4.7e+02 Score=24.21 Aligned_cols=41 Identities=2% Similarity=-0.215 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCCCcccccccccccc
Q 017989 317 YMKGFVLLLCYFVIGACFFVSNRPLDSDPNGVKMGLQSSTG 357 (362)
Q Consensus 317 ~~~g~~ll~~Y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (362)
-.-+..++.+|-+-+....+.+++.++++++.|+.+||...
T Consensus 216 ~llaiPl~lLYEisI~i~~~~~~~~~~~~~~~~~~~~~~~~ 256 (258)
T PRK10921 216 TLLAIPMYCLFEIGVFFSRFYVGKGRRREEENDAEAESEKT 256 (258)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccccccchhhhccccc
Confidence 34567777788777765555555555666666667776543
No 36
>PF12263 DUF3611: Protein of unknown function (DUF3611); InterPro: IPR022051 This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 180 and 205 amino acids in length. There are two completely conserved residues (W and G) that may be functionally important.
Probab=27.73 E-value=4.2e+02 Score=23.27 Aligned_cols=37 Identities=14% Similarity=0.054 Sum_probs=21.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcch
Q 017989 189 FWSGFAWLVGMTAIIALLSEFVVGTIEDASNSWGISVSF 227 (362)
Q Consensus 189 ~~~~~~~l~~~~~~i~~~a~~lv~~~~~i~~~~gi~~~~ 227 (362)
.+..+..=++|..+..++++..+..+-. +.+--|+..
T Consensus 104 l~~Gl~~nl~Gmllt~lG~~a~vG~L~a--k~lsqp~g~ 140 (183)
T PF12263_consen 104 LRIGLIINLVGMLLTLLGAQATVGTLVA--KALSQPQGA 140 (183)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHcCCCCc
Confidence 3444455566777777888887766543 333345544
No 37
>PF08370 PDR_assoc: Plant PDR ABC transporter associated; InterPro: IPR013581 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energise diverse biological systems. ABC transporters minimally consist of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. ABC transporters are involved in the export or import of a wide variety of substrates ranging from small ions to macromolecules. The major function of ABC import systems is to provide essential nutrients to bacteria. They are found only in prokaryotes and their four constitutive domains are usually encoded by independent polypeptides (two ABC proteins and two TMD proteins). Prokaryotic importers require additional extracytoplasmic binding proteins (one or more per systems) for function. In contrast, export systems are involved in the extrusion of noxious substances, the export of extracellular toxins and the targeting of membrane components. They are found in all living organisms and in general the TMD is fused to the ABC module in a variety of combinations. Some eukaryotic exporters encode the four domains on the same polypeptide chain []. The ABC module (approximately two hundred amino acid residues) is known to bind and hydrolyse ATP, thereby coupling transport to ATP hydrolysis in a large number of biological processes. The cassette is duplicated in several subfamilies. Its primary sequence is highly conserved, displaying a typical phosphate-binding loop: Walker A, and a magnesium binding site: Walker B. Besides these two regions, three other conserved motifs are present in the ABC cassette: the switch region which contains a histidine loop, postulated to polarise the attaching water molecule for hydrolysis, the signature conserved motif (LSGGQ) specific to the ABC transporter, and the Q-motif (between Walker A and the signature), which interacts with the gamma phosphate through a water bond. The Walker A, Walker B, Q-loop and switch region form the nucleotide binding site [, , ]. The 3D structure of a monomeric ABC module adopts a stubby L-shape with two distinct arms. ArmI (mainly beta-strand) contains Walker A and Walker B. The important residues for ATP hydrolysis and/or binding are located in the P-loop. The ATP-binding pocket is located at the extremity of armI. The perpendicular armII contains mostly the alpha helical subdomain with the signature motif. It only seems to be required for structural integrity of the ABC module. ArmII is in direct contact with the TMD. The hinge between armI and armII contains both the histidine loop and the Q-loop, making contact with the gamma phosphate of the ATP molecule. ATP hydrolysis leads to a conformational change that could facilitate ADP release. In the dimer the two ABC cassettes contact each other through hydrophobic interactions at the antiparallel beta-sheet of armI by a two-fold axis [, , , , , ]. The ATP-Binding Cassette (ABC) superfamily forms one of the largest of all protein families with a diversity of physiological functions []. Several studies have shown that there is a correlation between the functional characterisation and the phylogenetic classification of the ABC cassette [, ]. More than 50 subfamilies have been described based on a phylogenetic and functional classification [, , ]; (for further information see http://www.tcdb.org/tcdb/index.php?tc=3.A.1). This domain is found on the C terminus of ABC-2 type transporter domains (IPR013525 from INTERPRO). It seems to be associated with the plant pleiotropic drug resistance (PDR) protein family of ABC transporters. Like in yeast, plant PDR ABC transporters may also play a role in the transport of antifungal agents [] (see also IPR010929 from INTERPRO). The PDR family is characterised by a configuration in which the ABC domain is nearer the N terminus of the protein than the transmembrane domain [].
Probab=27.39 E-value=89 Score=22.56 Aligned_cols=25 Identities=28% Similarity=0.331 Sum_probs=21.3
Q ss_pred chhHHHHhHHH-HHHHHHHHHHHHHh
Q 017989 62 IDVVKYSLLGS-ILSNLLLVLGTSLF 86 (362)
Q Consensus 62 ~~ia~g~iiGS-~i~nlllilGl~~l 86 (362)
.=+++|.++|. .+||++..+++..+
T Consensus 29 yWIgvgaL~G~~vlFNil~~laL~yL 54 (65)
T PF08370_consen 29 YWIGVGALLGFIVLFNILFTLALTYL 54 (65)
T ss_pred EeehHHHHHHHHHHHHHHHHHHHHhc
Confidence 56899999997 67899998888876
No 38
>PLN00077 photosystem II reaction centre W protein; Provisional
Probab=25.44 E-value=89 Score=25.30 Aligned_cols=31 Identities=19% Similarity=0.290 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCCCcc
Q 017989 317 YMKGFVLLLCYFVIGACFFVSNRPLDSDPNG 347 (362)
Q Consensus 317 ~~~g~~ll~~Y~~y~~~~~~~~~~~~~~~~~ 347 (362)
..-|++|+.+|......++.+.+..+++++|
T Consensus 93 ~~LgwIL~gVf~liw~ly~~~~~~l~~~edD 123 (128)
T PLN00077 93 NLLGWILLGVFGLIWSLYTTYTSDLPEDEED 123 (128)
T ss_pred chhhHHHHhHHHHHHHHHhheecccCCcccc
Confidence 4457788888877766666666655544443
No 39
>PF07123 PsbW: Photosystem II reaction centre W protein (PsbW); InterPro: IPR009806 Oxygenic photosynthesis uses two multi-subunit photosystems (I and II) located in the cell membranes of cyanobacteria and in the thylakoid membranes of chloroplasts in plants and algae. Photosystem II (PSII) has a P680 reaction centre containing chlorophyll 'a' that uses light energy to carry out the oxidation (splitting) of water molecules, and to produce ATP via a proton pump. Photosystem I (PSI) has a P700 reaction centre containing chlorophyll that takes the electron and associated hydrogen donated from PSII to reduce NADP+ to NADPH. Both ATP and NADPH are subsequently used in the light-independent reactions to convert carbon dioxide to glucose using the hydrogen atom extracted from water by PSII, releasing oxygen as a by-product. PSII is a multisubunit protein-pigment complex containing polypeptides both intrinsic and extrinsic to the photosynthetic membrane [, ]. Within the core of the complex, the chlorophyll and beta-carotene pigments are mainly bound to the antenna proteins CP43 (PsbC) and CP47 (PsbB), which pass the excitation energy on to the reaction centre proteins D1 (Qb, PsbA) and D2 (Qa, PsbD) that bind all the redox-active cofactors involved in the energy conversion process. The PSII oxygen-evolving complex (OEC) oxidises water to provide protons for use by PSI, and consists of OEE1 (PsbO), OEE2 (PsbP) and OEE3 (PsbQ). The remaining subunits in PSII are of low molecular weight (less than 10 kDa), and are involved in PSII assembly, stabilisation, dimerisation, and photo-protection []. This family represents the low molecular weight transmembrane protein PsbW found in PSII, where it is a subunit of the oxygen-evolving complex. PsbW appears to have several roles, including guiding PSII biogenesis and assembly, stabilising dimeric PSII [], and facilitating PSII repair after photo-inhibition []. There appears to be two classes of PsbW, class 1 being found predominantly in algae and cyanobacteria, and class 2 being found predominantly in plants. This entry represents class 2 PsbW.; GO: 0015979 photosynthesis, 0009507 chloroplast, 0009523 photosystem II
Probab=25.37 E-value=97 Score=25.82 Aligned_cols=27 Identities=30% Similarity=0.512 Sum_probs=18.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHcCCCCC
Q 017989 316 HYMKGFVLLLCYFVIGACFFVSNRPLD 342 (362)
Q Consensus 316 ~~~~g~~ll~~Y~~y~~~~~~~~~~~~ 342 (362)
|-..|++|+.+|......++.+.+..+
T Consensus 103 n~~LgwIL~gVf~lIWslY~~~~~~l~ 129 (138)
T PF07123_consen 103 NNLLGWILLGVFGLIWSLYFVYTSTLD 129 (138)
T ss_pred CchhHHHHHHHHHHHHHHHHhhccccC
Confidence 345677888888777766666665554
No 40
>PF05684 DUF819: Protein of unknown function (DUF819); InterPro: IPR008537 This family contains proteins of unknown function from archaeal, bacterial and plant species.
Probab=23.25 E-value=2.6e+02 Score=27.59 Aligned_cols=53 Identities=9% Similarity=0.119 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCcchhhhhhhhccccchhHH
Q 017989 191 SGFAWLVGMTAIIALLSEFVVGTIEDASNSW-GISVSFISIILLPIVGNAAEHA 243 (362)
Q Consensus 191 ~~~~~l~~~~~~i~~~a~~lv~~~~~i~~~~-gi~~~~iG~~l~al~tslPE~~ 243 (362)
+.+...+.....+...++.+.+.+....... +-.-.++-.+.+++.++.|...
T Consensus 206 ~~l~~~la~a~~v~~~s~~la~~l~~~~~~~~~~~~~il~~tt~~l~~~~~~~~ 259 (378)
T PF05684_consen 206 QDLAFLLAVAFAVVALSHALAAWLPPLFAGISSSTWLILTVTTLGLATSFPPFR 259 (378)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHhccchh
Confidence 4444433333444556677766664433222 2222344445566777777644
No 41
>PF05915 DUF872: Eukaryotic protein of unknown function (DUF872); InterPro: IPR008590 This entry represents several uncharacterised eukaryotic transmembrane proteins. The function of this currently unknown.
Probab=22.14 E-value=2.5e+02 Score=22.66 Aligned_cols=60 Identities=18% Similarity=0.187 Sum_probs=32.6
Q ss_pred HHHH----HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcchhhhhhhhccccchhHHHHHHH--HHhCCcc
Q 017989 190 WSGF----AWLVGMTAIIALLSEFVVGTIEDASNSWGISVSFISIILLPIVGNAAEHAGAIIF--AFKNKLD 255 (362)
Q Consensus 190 ~~~~----~~l~~~~~~i~~~a~~lv~~~~~i~~~~gi~~~~iG~~l~al~tslPE~~~ai~a--a~~g~~~ 255 (362)
||.+ .++++|+.++..+.-.+...++ +=.+.-.+++++++.+-+|-.--...+ +.+|+..
T Consensus 41 wK~I~la~~Lli~G~~li~~g~l~~~~~i~------~~~~~~~~llilG~L~fIPG~Y~~~i~y~a~rg~~G 106 (115)
T PF05915_consen 41 WKSIALAVFLLIFGTVLIIIGLLLFFGHID------GDRDRGWALLILGILCFIPGFYHTRIAYYAWRGYKG 106 (115)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccC------CCCcccchHHHHHHHHHhccHHHHHHHHHHHcCCCC
Confidence 6644 4444455555555554444333 334555677777777777875544433 4556543
No 42
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=21.74 E-value=4.3e+02 Score=26.26 Aligned_cols=66 Identities=12% Similarity=0.085 Sum_probs=41.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcchhhhhhh--hccccchhHHHHHHHHHhCC
Q 017989 188 GFWSGFAWLVGMTAIIALLSEFVVGTIEDASNSWGISVSFISIILL--PIVGNAAEHAGAIIFAFKNK 253 (362)
Q Consensus 188 ~~~~~~~~l~~~~~~i~~~a~~lv~~~~~i~~~~gi~~~~iG~~l~--al~tslPE~~~ai~aa~~g~ 253 (362)
+.+..+..+..+...+...--..+.-+..+++.+|+|+...|..+- +++..+--...+....|-+|
T Consensus 10 ~~~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~R 77 (394)
T COG2814 10 PMWLALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLER 77 (394)
T ss_pred cchHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccch
Confidence 3456666666666666544444555689999999999999998654 44444444444444444333
No 43
>COG4736 CcoQ Cbb3-type cytochrome oxidase, subunit 3 [Posttranslational modification, protein turnover, chaperones]
Probab=21.43 E-value=61 Score=23.03 Aligned_cols=20 Identities=5% Similarity=0.130 Sum_probs=8.8
Q ss_pred HHHHHHHHHHHHHHcCCCCC
Q 017989 323 LLLCYFVIGACFFVSNRPLD 342 (362)
Q Consensus 323 ll~~Y~~y~~~~~~~~~~~~ 342 (362)
+..+|+.++...|+..++.+
T Consensus 18 ~~l~fiavi~~ayr~~~K~~ 37 (60)
T COG4736 18 FTLFFIAVIYFAYRPGKKGE 37 (60)
T ss_pred HHHHHHHHHHHHhcccchhh
Confidence 33444444444444444333
Done!