Query 017991
Match_columns 362
No_of_seqs 241 out of 1655
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 08:10:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017991.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017991hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3jur_A EXO-poly-alpha-D-galact 100.0 3.9E-60 1.3E-64 461.8 27.6 287 47-345 20-365 (448)
2 1bhe_A PEHA, polygalacturonase 100.0 3E-55 1E-59 421.4 31.7 274 54-345 14-317 (376)
3 2uvf_A Exopolygalacturonase; G 100.0 4.4E-53 1.5E-57 427.9 33.5 298 49-359 151-525 (608)
4 1rmg_A Rgase A, rhamnogalactur 100.0 4.2E-52 1.4E-56 403.7 33.1 267 51-345 17-287 (422)
5 1czf_A Polygalacturonase II; b 100.0 6.4E-52 2.2E-56 394.6 27.0 271 53-358 28-306 (362)
6 2iq7_A Endopolygalacturonase; 100.0 1.3E-50 4.6E-55 383.3 27.7 266 69-356 6-279 (339)
7 1nhc_A Polygalacturonase I; be 100.0 1.4E-50 4.8E-55 382.7 27.1 266 69-357 6-279 (336)
8 1hg8_A Endopolygalacturonase; 100.0 8E-50 2.7E-54 378.9 30.1 268 70-358 7-293 (349)
9 1ia5_A Polygalacturonase; glyc 100.0 1.4E-49 4.7E-54 376.1 28.5 253 70-343 11-271 (339)
10 1k5c_A Endopolygalacturonase; 100.0 2.7E-50 9.2E-55 379.6 22.6 247 71-343 8-263 (335)
11 2x6w_A Tail spike protein; vir 100.0 9.4E-45 3.2E-49 355.9 13.9 247 50-341 47-321 (600)
12 1h80_A IOTA-carrageenase; hydr 100.0 4.1E-38 1.4E-42 306.4 27.0 254 47-345 14-284 (464)
13 3gq8_A Preneck appendage prote 100.0 3.4E-38 1.2E-42 311.0 21.2 248 51-342 19-286 (609)
14 3gqn_A Preneck appendage prote 100.0 4.8E-38 1.6E-42 314.3 21.4 238 51-332 19-275 (772)
15 1x0c_A Isopullulanase; glycosi 100.0 5.6E-37 1.9E-41 305.1 13.4 253 59-342 147-462 (549)
16 1ogo_X Dextranase; hydrolase, 100.0 5.4E-34 1.8E-38 283.4 20.1 219 85-336 229-491 (574)
17 2vbk_A Tailspike-protein; vira 100.0 1.1E-32 3.7E-37 257.5 12.6 213 52-304 49-286 (514)
18 2pyg_A Poly(beta-D-mannuronate 100.0 4.9E-30 1.7E-34 246.7 22.5 253 54-345 2-310 (377)
19 3eqn_A Glucan 1,3-beta-glucosi 99.9 1.9E-23 6.4E-28 209.3 20.8 246 50-333 45-326 (758)
20 3jur_A EXO-poly-alpha-D-galact 99.9 2.3E-21 7.9E-26 188.7 19.5 193 137-359 191-411 (448)
21 1bhe_A PEHA, polygalacturonase 99.9 2E-19 6.8E-24 172.3 26.9 210 110-351 108-353 (376)
22 2iq7_A Endopolygalacturonase; 99.8 1.7E-19 5.9E-24 170.2 23.4 216 110-358 67-319 (339)
23 1ia5_A Polygalacturonase; glyc 99.8 4.9E-19 1.7E-23 167.0 23.4 216 110-358 71-321 (339)
24 1nhc_A Polygalacturonase I; be 99.8 1.4E-18 4.9E-23 163.7 22.5 215 110-358 67-318 (336)
25 1hg8_A Endopolygalacturonase; 99.8 1.9E-18 6.5E-23 163.5 23.1 216 110-358 68-331 (349)
26 2uvf_A Exopolygalacturonase; G 99.8 5.8E-19 2E-23 178.5 20.6 200 136-358 331-561 (608)
27 1czf_A Polygalacturonase II; b 99.8 1.9E-18 6.4E-23 164.2 21.8 215 110-358 94-344 (362)
28 1rmg_A Rgase A, rhamnogalactur 99.8 4.9E-17 1.7E-21 157.6 22.4 190 136-358 127-338 (422)
29 1k5c_A Endopolygalacturonase; 99.8 1E-17 3.5E-22 157.5 16.1 213 111-359 66-315 (335)
30 1ogo_X Dextranase; hydrolase, 99.8 2.9E-17 9.8E-22 163.4 20.1 209 87-331 264-512 (574)
31 1x0c_A Isopullulanase; glycosi 99.7 1.5E-16 5.2E-21 158.3 19.0 217 86-333 221-483 (549)
32 2inu_A Insulin fructotransfera 99.6 4.7E-15 1.6E-19 139.4 17.5 196 48-268 8-247 (410)
33 3gq8_A Preneck appendage prote 99.3 1.5E-10 5.1E-15 114.6 22.6 159 135-332 133-309 (609)
34 1ru4_A Pectate lyase, PEL9A; p 99.3 2.4E-10 8.3E-15 109.6 21.5 249 49-338 11-298 (400)
35 2pyg_A Poly(beta-D-mannuronate 99.3 1.2E-10 4E-15 111.4 18.6 144 181-339 174-341 (377)
36 1dbg_A Chondroitinase B; beta 99.3 1.4E-10 4.7E-15 114.0 18.9 206 70-310 30-271 (506)
37 3gqn_A Preneck appendage prote 99.3 3.1E-10 1.1E-14 114.2 21.8 116 210-332 182-309 (772)
38 3eqn_A Glucan 1,3-beta-glucosi 99.3 3.2E-11 1.1E-15 121.4 13.5 92 50-151 396-494 (758)
39 1h80_A IOTA-carrageenase; hydr 99.2 3.4E-10 1.2E-14 110.1 19.0 132 185-339 106-252 (464)
40 2x6w_A Tail spike protein; vir 99.2 3.1E-10 1.1E-14 111.9 13.8 176 110-333 149-344 (600)
41 1pxz_A Major pollen allergen J 98.8 7.4E-08 2.5E-12 90.4 14.7 112 181-300 107-222 (346)
42 3zsc_A Pectate trisaccharide-l 98.8 1.1E-06 3.7E-11 81.8 22.2 71 182-271 85-159 (340)
43 1idk_A Pectin lyase A; signal, 98.8 3E-07 1E-11 86.5 17.8 134 182-337 126-284 (359)
44 1pcl_A Pectate lyase E; lyase 98.8 5E-07 1.7E-11 84.9 18.8 20 181-200 97-116 (355)
45 1qcx_A Pectin lyase B; beta-he 98.7 3.9E-07 1.3E-11 85.8 17.3 134 182-337 126-284 (359)
46 1gq8_A Pectinesterase; hydrola 98.6 5.2E-07 1.8E-11 83.6 13.9 140 181-332 88-243 (319)
47 1xg2_A Pectinesterase 1; prote 98.6 4.8E-07 1.6E-11 83.8 13.0 140 181-332 84-239 (317)
48 1pxz_A Major pollen allergen J 98.5 5.9E-07 2E-11 84.2 12.3 125 187-333 118-272 (346)
49 3vmv_A Pectate lyase; polysacc 98.5 1.7E-06 5.8E-11 80.1 15.0 90 182-271 97-202 (326)
50 2qy1_A Pectate lyase II; GAG l 98.5 4.2E-06 1.4E-10 78.0 17.5 91 181-271 87-202 (330)
51 3uw0_A Pectinesterase; right-h 98.5 3.9E-06 1.3E-10 79.0 15.6 138 182-332 117-299 (364)
52 1air_A Pectate lyase C, PELC; 98.4 2.6E-06 8.8E-11 80.0 13.3 140 181-337 104-265 (353)
53 3zsc_A Pectate trisaccharide-l 98.4 7E-06 2.4E-10 76.4 15.9 159 145-334 62-251 (340)
54 2inu_A Insulin fructotransfera 98.3 6.4E-06 2.2E-10 77.6 13.6 128 188-336 136-279 (410)
55 1pe9_A Pectate lyase A; parall 98.3 7.9E-06 2.7E-10 76.8 13.8 20 181-200 104-126 (361)
56 1air_A Pectate lyase C, PELC; 98.3 3.3E-06 1.1E-10 79.3 10.3 117 182-303 82-215 (353)
57 1vbl_A Pectate lyase 47; PL 47 98.2 4.1E-06 1.4E-10 80.2 10.5 45 228-272 188-250 (416)
58 2x3h_A K5 lyase, K5A lyase; ba 98.2 0.00028 9.6E-09 63.2 20.7 192 52-282 62-271 (542)
59 2o04_A Pectate lyase, PL; hexa 98.1 7.9E-06 2.7E-10 77.8 10.1 75 228-302 182-275 (399)
60 2qy1_A Pectate lyase II; GAG l 98.1 8.6E-06 2.9E-10 75.9 10.0 120 182-303 66-204 (330)
61 2nsp_A Pectinesterase A; micha 98.1 4.7E-05 1.6E-09 71.2 13.7 137 182-332 91-275 (342)
62 1idk_A Pectin lyase A; signal, 98.0 7.7E-05 2.6E-09 70.1 13.7 105 187-303 107-233 (359)
63 2o04_A Pectate lyase, PL; hexa 98.0 7.2E-05 2.5E-09 71.2 13.4 90 181-271 144-274 (399)
64 3vmv_A Pectate lyase; polysacc 98.0 0.00056 1.9E-08 63.2 18.6 97 204-303 96-204 (326)
65 1vbl_A Pectate lyase 47; PL 47 97.9 7E-05 2.4E-09 71.6 11.6 91 181-271 149-280 (416)
66 1qcx_A Pectin lyase B; beta-he 97.9 0.00014 4.9E-09 68.3 13.3 104 188-303 108-233 (359)
67 1pcl_A Pectate lyase E; lyase 97.9 0.0003 1E-08 65.9 15.1 100 204-303 97-227 (355)
68 1ru4_A Pectate lyase, PEL9A; p 97.8 9.4E-05 3.2E-09 70.7 10.3 109 181-303 109-230 (400)
69 3grh_A YBHC, acyl-COA thioeste 97.7 0.0015 5.3E-08 61.9 17.6 140 183-334 196-364 (422)
70 2vbk_A Tailspike-protein; vira 97.3 0.00069 2.4E-08 64.1 8.8 69 182-273 198-285 (514)
71 1pe9_A Pectate lyase A; parall 97.2 0.0014 4.8E-08 61.5 9.8 91 209-303 112-238 (361)
72 3t9g_A Pectate lyase; PL3, par 97.0 0.085 2.9E-06 44.1 17.2 133 187-334 51-183 (196)
73 1ee6_A Pectate lyase; parallel 96.8 0.067 2.3E-06 44.9 15.4 132 187-333 47-178 (197)
74 1gq8_A Pectinesterase; hydrola 96.7 0.048 1.6E-06 50.2 15.7 114 207-333 90-210 (319)
75 1xg2_A Pectinesterase 1; prote 96.7 0.036 1.2E-06 51.0 14.2 113 208-333 87-206 (317)
76 1dbg_A Chondroitinase B; beta 96.5 0.014 4.8E-07 57.2 10.8 147 180-333 216-392 (506)
77 3b4n_A Endo-pectate lyase; pec 95.7 0.49 1.7E-05 43.0 15.9 166 147-331 125-300 (344)
78 3t9g_A Pectate lyase; PL3, par 95.4 0.64 2.2E-05 38.9 14.3 107 211-336 52-161 (196)
79 2nsp_A Pectinesterase A; micha 94.6 0.37 1.3E-05 44.7 12.2 113 208-332 93-230 (342)
80 1ee6_A Pectate lyase; parallel 93.9 1 3.5E-05 37.8 12.1 115 211-344 48-165 (197)
81 3uw0_A Pectinesterase; right-h 93.6 0.7 2.4E-05 43.2 11.9 114 208-332 119-255 (364)
82 3ju4_A Endo-N-acetylneuraminid 89.2 0.13 4.3E-06 48.4 1.6 38 60-101 4-41 (670)
83 3grh_A YBHC, acyl-COA thioeste 87.7 19 0.00065 34.0 15.4 140 207-360 197-357 (422)
84 3b4n_A Endo-pectate lyase; pec 83.3 12 0.0004 34.1 11.1 118 211-344 158-289 (344)
85 2vfm_A Bifunctional tail prote 58.8 57 0.002 29.9 9.4 81 237-333 269-374 (559)
86 2v5i_A Salmonella typhimurium 56.7 57 0.0019 29.9 9.0 81 237-333 272-377 (559)
87 3riq_A Tailspike protein; righ 51.3 1E+02 0.0034 28.9 9.9 28 305-332 383-412 (543)
88 3riq_A Tailspike protein; righ 50.7 26 0.00089 32.8 5.9 70 261-345 308-378 (543)
89 2xc1_A Bifunctional tail prote 48.7 93 0.0032 29.8 9.4 81 237-333 376-481 (666)
90 2vfm_A Bifunctional tail prote 31.1 3.1E+02 0.011 25.1 9.7 68 208-280 267-360 (559)
91 3bh7_B Protein XRP2; protein-p 31.0 3.1E+02 0.011 25.0 10.1 11 182-192 64-74 (352)
92 2v5i_A Salmonella typhimurium 30.9 3.1E+02 0.011 25.2 9.5 68 208-280 270-363 (559)
93 2yuh_A Tubulin-specific chaper 24.7 54 0.0018 26.9 3.3 11 182-192 71-81 (179)
94 2xc1_A Bifunctional tail prote 24.6 4.4E+02 0.015 25.2 9.7 68 208-280 374-467 (666)
95 3ky7_A TRNA (guanine-N(1)-)-me 22.8 58 0.002 28.4 3.2 49 52-100 57-118 (269)
No 1
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=100.00 E-value=3.9e-60 Score=461.79 Aligned_cols=287 Identities=28% Similarity=0.468 Sum_probs=256.8
Q ss_pred CCCCCCeeEEeeeccccCCCCcchHHHHHHHHHHHcCCCCCcEEEEcCCcEEEeeeeeccCCCCCCceEEEEeEEECCCC
Q 017991 47 TRSKSKRVIFVGDFGAKGDGFNDDTEAFANAWKKACSFPARTKIVFSAGYTFLIHPIDISGPCKSRLTLEISGTIVAPKD 126 (362)
Q Consensus 47 ~~~~~~~~~~v~~~Ga~~dg~~ddt~aiq~Ai~~a~~~~gg~~v~~P~G~~Y~i~~l~l~~~~~s~v~l~~~G~i~~~~~ 126 (362)
++..++.+++|++|||+|||++|||+|||+||++ |++.++++|+||+| +|++++|.| +++++|+++|+|+++++
T Consensus 20 ~p~~~~~~~~v~~~GA~gdg~tddt~Aiq~Ai~~-c~~~ggg~v~vP~G-~yl~~~l~l----~s~v~l~l~gtL~~s~d 93 (448)
T 3jur_A 20 EPQIPDREVNLLDFGARGDGRTDCSESFKRAIEE-LSKQGGGRLIVPEG-VFLTGPIHL----KSNIELHVKGTIKFIPD 93 (448)
T ss_dssp CCCCCSCEEEGGGGTCCCEEEEECHHHHHHHHHH-HHHHTCEEEEECSS-EEEESCEEC----CTTEEEEESSEEEECCC
T ss_pred CCCCCCcEEEEEecccCCCCCeecHHHHHHHHHh-hhhcCCeEEEECCC-cEEEeeeEe----CCCcEEEEEEEEEecCC
Confidence 4455678999999999999999999999999995 55556799999999 999999999 89999999999999999
Q ss_pred CCCcCCC-----------CccccEEEeceeeEEEEeccEEecCC--CeeeecccccCC----------------------
Q 017991 127 PDVWKGL-----------NRRRWLYFNRVNHLTVQGGGTINGMG--QEWWSRSCKINT---------------------- 171 (362)
Q Consensus 127 ~~~~~~~-----------~~~~~i~~~~~~ni~I~G~G~idG~G--~~~~~~~~~~~~---------------------- 171 (362)
+.+|... ...+||++.+++|++|+|.|+|||+| ..||........
T Consensus 94 ~~~y~p~~~~~~~G~~~~~~~~lI~~~~~~ni~ItG~GtIDG~G~~~~ww~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 173 (448)
T 3jur_A 94 PERYLPVVLTRFEGIELYNYSPLVYALDCENVAITGSGVLDGSADNEHWWPWKGKKDFGWKEGLPNQQEDVKKLKEMAER 173 (448)
T ss_dssp GGGGCSCEEEEETTEEEEESCCSEEEESCEEEEEESSCEEECCCBTTBBGGGGCCGGGTCCTTSCCSHHHHHHHHHHHHH
T ss_pred HHHhCcccccccccccccCccceEEEeCcEeeEEEEeEEEECCCCchhhhhhcccccccccccccccccchhhhhhhhcc
Confidence 9888321 13468999999999999999999999 899974321000
Q ss_pred ---------CCCCCCCCeEEEEEeecceEEEceEEeeCCCceeEEeceeeEEEEeEEEECCCCCCCCCeeeecCccCEEE
Q 017991 172 ---------TNPCRHAPTAITFHKCKNLKVQNLRVVNSQQMHIAFTNCLRVVISNLEVIAPAESPNTDGIHISASRGVEV 242 (362)
Q Consensus 172 ---------~~~~~~~~~~i~~~~~~nv~I~~v~i~n~~~~~i~~~~~~nv~i~n~~I~~~~~~~~~DGI~~~~s~nv~I 242 (362)
......||++|.|.+|+|++|++++++|+|.|++++..|+||+|+|++|.++ ++|+|||++.+|+||+|
T Consensus 174 ~~p~~~~~~~~~~~~RP~~i~~~~~~nv~i~giti~nsp~~~i~~~~~~nv~i~~v~I~~~--~~NtDGidi~~s~nV~I 251 (448)
T 3jur_A 174 GTPVEERVFGKGHYLRPSFVQFYRCRNVLVEGVKIINSPMWCIHPVLSENVIIRNIEISST--GPNNDGIDPESCKYMLI 251 (448)
T ss_dssp TCCGGGCBCSTTCCCCCCSEEEESCEEEEEESCEEESCSSCSEEEESCEEEEEESCEEEEC--STTCCSBCCBSCEEEEE
T ss_pred cCcchhhhccccccCCceEEEEEcccceEEEeeEEEeCCCceEeeeccCCEEEEeEEEeec--cCCCccccccCCcCEEE
Confidence 0123579999999999999999999999999999999999999999999996 58999999999999999
Q ss_pred EeeEEecCCccEEEcCC-----------ceeEEEEeeEE--cCCc-eeEEeecCCCCCcccEEeEEEEcEEEeCCceeEE
Q 017991 243 KNSIVGTGDDCISIVGN-----------SSLIRIRNFAC--GPGH-GISIGSLGKSNSSVRIHDIMVYGALISNTQNGVR 308 (362)
Q Consensus 243 ~n~~i~~gdD~i~i~s~-----------~~ni~i~n~~~--~~~~-gi~igs~g~~~~~~~v~ni~i~n~~i~~~~~gi~ 308 (362)
+||+|.++||||+++++ ++||+|+||+| ..+| |++|||+ ..+.++||+|+||++.++.+|++
T Consensus 252 ~n~~i~~gDDcIaiksg~~~dg~~~~~ps~nI~I~n~~~~~~~gh~gisiGS~----~~~~v~nV~v~n~~~~~t~~Gir 327 (448)
T 3jur_A 252 EKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSE----MSGGVRNVVARNNVYMNVERALR 327 (448)
T ss_dssp ESCEEEESSEEEEEBCCCHHHHHHHCCCEEEEEEESCEEECSSCSEEEEECSS----CTTCEEEEEEESCEEESCSEEEE
T ss_pred EeeEEEeCCCcEEeccCccccccccCCCceeEEEEEeEEecCCCcceEEECCc----ccCcEEEEEEEEEEEecccceEE
Confidence 99999999999999997 89999999999 6677 8999995 56789999999999999999999
Q ss_pred EEeeCCCCceEEeEEEEeEEEecCCccE-EEEeeeCCC
Q 017991 309 IKTWQGGSGSATNIQFLDVLMKNVSNPI-IIDQYYCDS 345 (362)
Q Consensus 309 i~~~~g~~g~i~ni~~~ni~~~~~~~~i-~i~~~y~~~ 345 (362)
||++.+++|.|+||+|+||+|.++++|+ .|+++|+..
T Consensus 328 IKt~~g~gG~v~nI~f~ni~m~~v~~~~i~I~~~Y~~~ 365 (448)
T 3jur_A 328 LKTNSRRGGYMENIFFIDNVAVNVSEEVIRINLRYDNE 365 (448)
T ss_dssp EECCTTTCSEEEEEEEESCEEEEESSEEEEEESCGGGC
T ss_pred EEEEcCCCceEeeEEEEEEEEECCccccEEEEeeccCC
Confidence 9999988899999999999999999988 999999875
No 2
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=100.00 E-value=3e-55 Score=421.36 Aligned_cols=274 Identities=26% Similarity=0.442 Sum_probs=243.7
Q ss_pred eEEeeeccccCCCCcchHHHHHHHHHHHcCCCCCcEEEEcC---CcEEEeeeeeccCCCCCCceEEEEe--EEECCCCCC
Q 017991 54 VIFVGDFGAKGDGFNDDTEAFANAWKKACSFPARTKIVFSA---GYTFLIHPIDISGPCKSRLTLEISG--TIVAPKDPD 128 (362)
Q Consensus 54 ~~~v~~~Ga~~dg~~ddt~aiq~Ai~~a~~~~gg~~v~~P~---G~~Y~i~~l~l~~~~~s~v~l~~~G--~i~~~~~~~ 128 (362)
+++|++|| .+|||+|||+||+ +|++ |++|+||+ | +|++++|.| +++++|++++ +|+++.++.
T Consensus 14 ~~~v~~~G-----~~~dT~aiq~Ai~-ac~~--Gg~v~~~~~~~g-~yl~g~i~l----~s~vtL~l~~Ga~L~~s~~~~ 80 (376)
T 1bhe_A 14 SCTTLKAD-----SSTATSTIQKALN-NCDQ--GKAVRLSAGSTS-VFLSGPLSL----PSGVSLLIDKGVTLRAVNNAK 80 (376)
T ss_dssp EEEEEECC-----SSBCHHHHHHHHT-TCCT--TCEEEEECSSSS-EEEESCEEC----CTTCEEEECTTCEEEECSCSG
T ss_pred eEEECCCC-----CCccHHHHHHHHH-Hhcc--CCcEEEECCCCc-eEEEeEEEE----CCCCEEEECCCeEEEeCCCHH
Confidence 59999986 4799999999999 6775 46666664 7 999999999 8999999995 999999888
Q ss_pred CcCCC------------CccccEEEeceeeEEEEeccEEecCC--------CeeeecccccCCCCCCCCCCeEEEEEeec
Q 017991 129 VWKGL------------NRRRWLYFNRVNHLTVQGGGTINGMG--------QEWWSRSCKINTTNPCRHAPTAITFHKCK 188 (362)
Q Consensus 129 ~~~~~------------~~~~~i~~~~~~ni~I~G~G~idG~G--------~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 188 (362)
.|+.. ...+||++.+++|++|+|.|+|||+| ..||..............||++|.|.+|+
T Consensus 81 ~y~~~~~~~g~~~~~g~~~~~~I~~~~~~ni~I~G~G~IdG~G~~~~~~~~~~ww~~~~~~~~~~~~~~rp~~i~~~~~~ 160 (376)
T 1bhe_A 81 SFENAPSSCGVVDKNGKGCDAFITAVSTTNSGIYGPGTIDGQGGVKLQDKKVSWWELAADAKVKKLKQNTPRLIQINKSK 160 (376)
T ss_dssp GGBSSTTCSSCEESCSCCBCCSEEEESCBSCEEECSSEEECCTTSCCSSSSSCTTHHHHHHHHHTCEECCCCSEEEESCE
T ss_pred HCcCCCccccccccCCCCcccEEEEECCEeEEEEeCEEEECCCCcccCCCccccccccccccccCccCCCCeEEEEEcce
Confidence 88542 23579999999999999999999999 47887422111011124689999999999
Q ss_pred ceEEEceEEeeCCCceeEEeceeeEEEEeEEEECCCCCCCCCeeeecCccCEEEEeeEEecCCccEEEcC-----CceeE
Q 017991 189 NLKVQNLRVVNSQQMHIAFTNCLRVVISNLEVIAPAESPNTDGIHISASRGVEVKNSIVGTGDDCISIVG-----NSSLI 263 (362)
Q Consensus 189 nv~I~~v~i~n~~~~~i~~~~~~nv~i~n~~I~~~~~~~~~DGI~~~~s~nv~I~n~~i~~gdD~i~i~s-----~~~ni 263 (362)
|++|++++++|+|.|++++..|++++|+|++|.++..++|+||||+.+|+||+|+||+|.++||||++++ +++||
T Consensus 161 nv~I~~iti~nsp~~~i~~~~~~~v~i~~v~I~~~~~~~NtDGid~~~s~nV~I~n~~i~~gDDcIaiks~~~~~~s~nI 240 (376)
T 1bhe_A 161 NFTLYNVSLINSPNFHVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAYSNIATGDDNVAIKAYKGRAETRNI 240 (376)
T ss_dssp EEEEEEEEEECCSSCSEEEESCEEEEEEEEEEECCTTCSSCCSEEEESCEEEEEESCEEECSSCSEEEEECTTSCCEEEE
T ss_pred EEEEEeEEEECCCcEEEEEeCCCcEEEEeEEEECCCCCCCCceEeecCCceEEEEeCEEecCCCeEEEcccCCCCCceEE
Confidence 9999999999999999999999999999999999988899999999999999999999999999999996 79999
Q ss_pred EEEeeEEcCCceeEEeecCCCCCcccEEeEEEEcEEEeCCceeEEEEeeCCCCceEEeEEEEeEEEecCCccEEEEeeeC
Q 017991 264 RIRNFACGPGHGISIGSLGKSNSSVRIHDIMVYGALISNTQNGVRIKTWQGGSGSATNIQFLDVLMKNVSNPIIIDQYYC 343 (362)
Q Consensus 264 ~i~n~~~~~~~gi~igs~g~~~~~~~v~ni~i~n~~i~~~~~gi~i~~~~g~~g~i~ni~~~ni~~~~~~~~i~i~~~y~ 343 (362)
+|+||+|.++||++|||+. . .++||+|+||+|.++.+|++||+|++++|.|+||+|+||+|+++++||.|+|.|+
T Consensus 241 ~I~n~~~~~ghGisiGSe~----~-~v~nV~v~n~~~~~t~~GirIKt~~g~~G~v~ni~f~ni~~~~v~~~i~i~~~y~ 315 (376)
T 1bhe_A 241 SILHNDFGTGHGMSIGSET----M-GVYNVTVDDLKMNGTTNGLRIKSDKSAAGVVNGVRYSNVVMKNVAKPIVIDTVYE 315 (376)
T ss_dssp EEEEEEECSSSCEEEEEEE----S-SEEEEEEEEEEEESCSEEEEEECCTTTCCEEEEEEEEEEEEESCSEEEEEETTSS
T ss_pred EEEeeEEEccccEEeccCC----c-cEeeEEEEeeEEeCCCcEEEEEEecCCCceEeeEEEEeEEEeCCCceEEEEeecc
Confidence 9999999999999999953 3 8999999999999999999999999999999999999999999999999999998
Q ss_pred CC
Q 017991 344 DS 345 (362)
Q Consensus 344 ~~ 345 (362)
+.
T Consensus 316 ~~ 317 (376)
T 1bhe_A 316 KK 317 (376)
T ss_dssp CC
T ss_pred CC
Confidence 75
No 3
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=100.00 E-value=4.4e-53 Score=427.87 Aligned_cols=298 Identities=23% Similarity=0.317 Sum_probs=256.9
Q ss_pred CCCCeeEEeeeccccCCCCcchHHHHHHHHHHHcCCCCCcEEEEcCCcEEEeeeeeccCCCCCCceEEEE--eEEECCCC
Q 017991 49 SKSKRVIFVGDFGAKGDGFNDDTEAFANAWKKACSFPARTKIVFSAGYTFLIHPIDISGPCKSRLTLEIS--GTIVAPKD 126 (362)
Q Consensus 49 ~~~~~~~~v~~~Ga~~dg~~ddt~aiq~Ai~~a~~~~gg~~v~~P~G~~Y~i~~l~l~~~~~s~v~l~~~--G~i~~~~~ 126 (362)
.+.+..++|++|||++||++|||+|||+||+ +|+. +++|+||+| +|++++|.| +++++|+++ |+|+++.+
T Consensus 151 ~~~~~~~~v~~~Ga~~dg~~ddt~aiq~Ai~-~c~~--g~~v~vP~G-~y~~g~i~l----ks~v~L~l~~gatL~~s~d 222 (608)
T 2uvf_A 151 SAKPQIVNVRDFGAIDDGKTLNTKAIQQAID-SCKP--GCRVEIPAG-TYKSGALWL----KSDMTLNLQAGAILLGSEN 222 (608)
T ss_dssp CCCCCEEEGGGGTCCSSSSCCCHHHHHHHHH-TCCT--TEEEEECSE-EEEECCEEC----CSSEEEEECTTEEEEECSC
T ss_pred ccCCCEEecccccccCCCCccCHHHHHHHHH-hcCC--CCEEEECCC-ceEecceec----cCceEEEecCCcEEEecCC
Confidence 3456789999999999999999999999999 6765 799999999 999999999 899999995 79999988
Q ss_pred CCCcCCC----------CccccEEEec--------eeeEEEEeccEEecCCCeeeecccccCC-----------------
Q 017991 127 PDVWKGL----------NRRRWLYFNR--------VNHLTVQGGGTINGMGQEWWSRSCKINT----------------- 171 (362)
Q Consensus 127 ~~~~~~~----------~~~~~i~~~~--------~~ni~I~G~G~idG~G~~~~~~~~~~~~----------------- 171 (362)
+..|+.. ...++|+..+ ++||+|+|.|+|||+|..||......+.
T Consensus 223 ~~~y~~~~~~~~~~~~~~~~~lI~~~~~~~~~~g~~~ni~I~G~GtIDG~G~~~~~~~~~~~~~g~~~p~~~~~~~~~~~ 302 (608)
T 2uvf_A 223 PDDYPAGYRLYPYSTIERPASLINAIDPNNSKPGTFRNIRITGSGVIDGNGWLRAKTAEITDELGRSLPQYVASKNSKVH 302 (608)
T ss_dssp GGGSCEEECSSTTCCSCEECCSEEECCSSCCCTTSEEEEEEESSCEEECCCBCEEEEEEEECTTSCEEEEECCCCTTTHH
T ss_pred HHHCcCcceeeeccccccccceEEeeccccccccceeeEEEEeeEEEcCccccccccccccccccccccccccccccccc
Confidence 8777521 0125788877 7999999999999999888742100000
Q ss_pred ----------------CCC-----CCCCCeEEEEEeecceEEEceEEeeCCCceeEEeceeeEEEEeEEEECCCCCCCCC
Q 017991 172 ----------------TNP-----CRHAPTAITFHKCKNLKVQNLRVVNSQQMHIAFTNCLRVVISNLEVIAPAESPNTD 230 (362)
Q Consensus 172 ----------------~~~-----~~~~~~~i~~~~~~nv~I~~v~i~n~~~~~i~~~~~~nv~i~n~~I~~~~~~~~~D 230 (362)
... +..||++|.|.+|+|++|+|++++|++.|++++..|+||+|+|++|.. .+++|+|
T Consensus 303 ~~~~~~~~~~~~~~~~g~~~~~~~~~~rP~~i~~~~~~nv~I~giti~ns~~~~i~~~~~~nv~i~~v~i~~-~~~~NtD 381 (608)
T 2uvf_A 303 EDGILAKNQVEKAVSDGMDLKNAYGQRRSSLMTLRGVENVYLAGFTVRNPAFHGIMNLENHNVVANGLIHQT-YDANNGD 381 (608)
T ss_dssp HHBSHHHHHHHHHHHTTCCHHHHHHHSSCCSEEEESEEEEEEESCEEECCSSCSEEEESCEEEEEESCEEEC-TTCTTCC
T ss_pred ccccccccccccccccccccccccccCCCeEEEEEeeeeEEEeCcEEecCCCCEEEEecCCCEEEeeEEEcC-CCCCCCC
Confidence 000 124899999999999999999999999999999999999999999865 4568999
Q ss_pred eeeecCccCEEEEeeEEecCCccEEEcCC----------ceeEEEEeeEEcCCcee-EEeecCCCCCcccEEeEEEEcEE
Q 017991 231 GIHISASRGVEVKNSIVGTGDDCISIVGN----------SSLIRIRNFACGPGHGI-SIGSLGKSNSSVRIHDIMVYGAL 299 (362)
Q Consensus 231 GI~~~~s~nv~I~n~~i~~gdD~i~i~s~----------~~ni~i~n~~~~~~~gi-~igs~g~~~~~~~v~ni~i~n~~ 299 (362)
||++.+|+||+|+||+|.++||||+++++ ++||+|+||+|.++||+ .||| ++.+.++||+|+||+
T Consensus 382 Gidi~~s~nV~I~n~~i~~gDD~Iaiksg~~~~g~~~~~s~nI~I~n~~~~~ghg~~~iGS----~~~~~v~nI~v~n~~ 457 (608)
T 2uvf_A 382 GIEFGNSQNVMVFNNFFDTGDDCINFAAGTGEKAQEQEPMKGAWLFNNYFRMGHGAIVTGS----HTGAWIEDILAENNV 457 (608)
T ss_dssp SEEEESCEEEEEESCEEECSSCSEEEECCCSGGGGGSCCEEEEEEESCEECSSSCSEEEES----CCTTCEEEEEEESCE
T ss_pred eEEecCCceEEEEeeEEecCCceEEecCCcCccccccccccCEEEEeEEEeCCCCeEEEcc----cCCCCEEEEEEEeEE
Confidence 99999999999999999999999999986 79999999999999985 5899 577899999999999
Q ss_pred EeCCceeEEEEeeCCCCceEEeEEEEeEEEecC-CccEEEEeeeCCCCC-------CCCCCCCceeee
Q 017991 300 ISNTQNGVRIKTWQGGSGSATNIQFLDVLMKNV-SNPIIIDQYYCDSPV-------PCANQVCNPYAT 359 (362)
Q Consensus 300 i~~~~~gi~i~~~~g~~g~i~ni~~~ni~~~~~-~~~i~i~~~y~~~~~-------~c~~~~~~~~~~ 359 (362)
+.++.+|++||++.+++|.|+||+|+||+|+++ ++||.|++.|++... .|+.+.++|.+.
T Consensus 458 ~~~t~~GirIKt~~g~gG~v~nI~~~ni~m~~v~~~~i~I~~~y~~~~~~~~~~~~~~~~~~~~V~i~ 525 (608)
T 2uvf_A 458 MYLTDIGLRAKSTSTIGGGARNVTFRNNAMRDLAKQVMVMTLDYADSNANIDYPPAKIPAQFYDFTLK 525 (608)
T ss_dssp EESCSEEEEEEEETTTCCEEEEEEEEEEEEEEESSEEEEEEEECCCCSCCCSSCCCSSCCEEEEEEEE
T ss_pred EECCCceEEEeeecCCCceEECcEEEeeEEEccccccEEEEeccCCCCcccccCCcCCCCccccEEEE
Confidence 999999999999999889999999999999999 589999999987542 366666777653
No 4
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=100.00 E-value=4.2e-52 Score=403.75 Aligned_cols=267 Identities=18% Similarity=0.364 Sum_probs=237.7
Q ss_pred CCeeEEeeeccccCCCCcchHHHHHHHHHHHcCCCCCcEEEEcCCcEEEeee-eeccCCCCCCceEEEEeEEECCCCCCC
Q 017991 51 SKRVIFVGDFGAKGDGFNDDTEAFANAWKKACSFPARTKIVFSAGYTFLIHP-IDISGPCKSRLTLEISGTIVAPKDPDV 129 (362)
Q Consensus 51 ~~~~~~v~~~Ga~~dg~~ddt~aiq~Ai~~a~~~~gg~~v~~P~G~~Y~i~~-l~l~~~~~s~v~l~~~G~i~~~~~~~~ 129 (362)
...+++|++|||++||++|||+|||+||+ +|+. +++|+||+| +|++++ |.|++ .++++|+++|+++...+..
T Consensus 17 ~~~~~~V~~~GA~~dg~tddT~Aiq~Ai~-ac~~--g~~V~vP~G-~Yli~~~l~l~g--~s~v~l~l~G~~l~~~~~~- 89 (422)
T 1rmg_A 17 ATKTCNILSYGAVADNSTDVGPAITSAWA-ACKS--GGLVYIPSG-NYALNTWVTLTG--GSATAIQLDGIIYRTGTAS- 89 (422)
T ss_dssp HHCEEEGGGGTCCCSSSSBCHHHHHHHHH-HHTB--TCEEEECSS-EEEECSCEEEES--CEEEEEEECSEEEECCCCS-
T ss_pred CCcEEEeeeccccCCCCcccHHHHHHHHH-HCCC--CCEEEECCC-eEEeCCceeecC--CCeEEEEEcCcEEcccCCC-
Confidence 35689999999999999999999999999 5653 789999999 999975 99976 5899999999887754321
Q ss_pred cCCCCccccEE---EeceeeEEEEeccEEecCCCeeeecccccCCCCCCCCCCeEEEEEeecceEEEceEEeeCCCceeE
Q 017991 130 WKGLNRRRWLY---FNRVNHLTVQGGGTINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKVQNLRVVNSQQMHIA 206 (362)
Q Consensus 130 ~~~~~~~~~i~---~~~~~ni~I~G~G~idG~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~nv~I~~v~i~n~~~~~i~ 206 (362)
..|+. ..+++++.|+|.|+|||+|..||.. +..||++|.+..|+|++|++++++|++.|+++
T Consensus 90 ------~~~~~~~~~~~~~~i~i~G~G~IdG~G~~~w~~---------~~~rp~~i~~~~~~nv~I~~iti~nsp~~~i~ 154 (422)
T 1rmg_A 90 ------GNMIAVTDTTDFELFSSTSKGAVQGFGYVYHAE---------GTYGARILRLTDVTHFSVHDIILVDAPAFHFT 154 (422)
T ss_dssp ------SEEEEEEEEEEEEEECSSSCCEEECCTHHHHTT---------TCCCCEEEEEEEEEEEEEEEEEEECCSSCSEE
T ss_pred ------CceEEEEecCceeEEeeccCEEEECCcchhhcC---------CCCCceEEEEcccceEEEECeEEECCCceEEE
Confidence 23444 4566667778999999999999962 12489999999999999999999999999999
Q ss_pred EeceeeEEEEeEEEECCCCCCCCCeeeecCccCEEEEeeEEecCCccEEEcCCceeEEEEeeEEcCCceeEEeecCCCCC
Q 017991 207 FTNCLRVVISNLEVIAPAESPNTDGIHISASRGVEVKNSIVGTGDDCISIVGNSSLIRIRNFACGPGHGISIGSLGKSNS 286 (362)
Q Consensus 207 ~~~~~nv~i~n~~I~~~~~~~~~DGI~~~~s~nv~I~n~~i~~gdD~i~i~s~~~ni~i~n~~~~~~~gi~igs~g~~~~ 286 (362)
+..|+||+|+|++|.+ .+.+++|||++.+ +||+|+||+|.++||||+++++++||+|+||+|.++||++|||+|+
T Consensus 155 i~~~~nv~I~n~~I~~-~d~~ntDGidi~~-~nV~I~n~~i~~gDD~Iai~s~~~nI~I~n~~~~~~~GisIGS~g~--- 229 (422)
T 1rmg_A 155 MDTCSDGEVYNMAIRG-GNEGGLDGIDVWG-SNIWVHDVEVTNKDECVTVKSPANNILVESIYCNWSGGCAMGSLGA--- 229 (422)
T ss_dssp EEEEEEEEEEEEEEEC-CSSTTCCSEEEEE-EEEEEEEEEEESSSEEEEEEEEEEEEEEEEEEEESSSEEEEEEECT---
T ss_pred EeCcCCEEEEeEEEEC-CCCCCCccEeecC-CeEEEEeeEEeCCCCeEEeCCCCcCEEEEeEEEcCCcceeecccCC---
Confidence 9999999999999999 4557999999999 9999999999999999999999999999999999999999999863
Q ss_pred cccEEeEEEEcEEEeCCceeEEEEeeCCCCceEEeEEEEeEEEecCCccEEEEeeeCCC
Q 017991 287 SVRIHDIMVYGALISNTQNGVRIKTWQGGSGSATNIQFLDVLMKNVSNPIIIDQYYCDS 345 (362)
Q Consensus 287 ~~~v~ni~i~n~~i~~~~~gi~i~~~~g~~g~i~ni~~~ni~~~~~~~~i~i~~~y~~~ 345 (362)
...++||+|+|++|.++.+|++||++.+ .|.++||+|+||+|+++++||.|+++|++.
T Consensus 230 ~~~v~nV~v~n~~~~~~~~Gi~Ikt~~g-~G~v~nI~~~NI~~~~v~~~i~i~~~y~~~ 287 (422)
T 1rmg_A 230 DTDVTDIVYRNVYTWSSNQMYMIKSNGG-SGTVSNVLLENFIGHGNAYSLDIDGYWSSM 287 (422)
T ss_dssp TEEEEEEEEEEEEEESSSCSEEEEEBBC-CEEEEEEEEEEEEEEEESCSEEEETBCTTS
T ss_pred CCcEEEEEEEeEEEeccceEEEEEecCC-CcEEEEEEEEeEEEECccccEEEEeeccCC
Confidence 3589999999999999999999999765 589999999999999999999999999774
No 5
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=100.00 E-value=6.4e-52 Score=394.56 Aligned_cols=271 Identities=25% Similarity=0.423 Sum_probs=236.1
Q ss_pred eeEEeeeccccCCCCcchHHHHHHHHHHHcCCCCCcEEEEcCCcEEEeeee-eccCCCCCCceEEEEeEEECCCCCCCcC
Q 017991 53 RVIFVGDFGAKGDGFNDDTEAFANAWKKACSFPARTKIVFSAGYTFLIHPI-DISGPCKSRLTLEISGTIVAPKDPDVWK 131 (362)
Q Consensus 53 ~~~~v~~~Ga~~dg~~ddt~aiq~Ai~~a~~~~gg~~v~~P~G~~Y~i~~l-~l~~~~~s~v~l~~~G~i~~~~~~~~~~ 131 (362)
.+++|++ ++|||+|++ +|++.++++|+||+| +|+. | .| +++++|+++|++.+. ...|+
T Consensus 28 ~~Ctv~~-----------~~aiq~ai~-~c~~~~g~~v~vP~G-~~l~--l~~l----~~~~~l~~~g~~~~~--~~~w~ 86 (362)
T 1czf_A 28 DSCTFTT-----------AAAAKAGKA-KCSTITLNNIEVPAG-TTLD--LTGL----TSGTKVIFEGTTTFQ--YEEWA 86 (362)
T ss_dssp CEEEESS-----------HHHHHHHGG-GCSEEEEESCEECTT-CCEE--ECSC----CTTCEEEEESEEEEC--CCCSC
T ss_pred CEEEECC-----------HHHHHHHHH-HhhccCCCEEEECCC-EEEE--eecc----CCCeEEEEeCcEEec--cccCC
Confidence 5688876 689999999 577666789999999 8763 4 55 779999999988763 35676
Q ss_pred CCCccccEEEeceeeEEEEe--ccEEecCCCeeeecccccCCCCCCCCCCeEEEEEeecceEEEceEEeeCCCceeEEec
Q 017991 132 GLNRRRWLYFNRVNHLTVQG--GGTINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKVQNLRVVNSQQMHIAFTN 209 (362)
Q Consensus 132 ~~~~~~~i~~~~~~ni~I~G--~G~idG~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~nv~I~~v~i~n~~~~~i~~~~ 209 (362)
+ +|+.+.+ +|++|+| .|+|||+|..||..... .+..||+++.+..|+|++|++++++|+|.|++++.
T Consensus 87 g----~~i~~~~-~nv~I~G~~~g~IdG~G~~~w~~~~~-----~~~~rP~~i~~~~~~nv~i~~iti~nsp~~~i~i~- 155 (362)
T 1czf_A 87 G----PLISMSG-EHITVTGASGHLINCDGARWWDGKGT-----SGKKKPKFFYAHGLDSSSITGLNIKNTPLMAFSVQ- 155 (362)
T ss_dssp C----CSEEEEE-ESCEEEECTTCEEECCGGGTCCSCTT-----SSSCCCCCEEEEEEETEEEESCEEECCSSCCEEEE-
T ss_pred C----cEEEEeC-ccEEEEcCCCcEEECCCchhhcccCC-----CCCCCCeEEEEeecccEEEEEEEEecCCccEEEEe-
Confidence 4 7888865 9999999 69999999999984321 14679999999999999999999999999999999
Q ss_pred eeeEEEEeEEEECCC-C---CCCCCeeeecCccCEEEEeeEEecCCccEEEcCCceeEEEEeeEEcCCceeEEeecCCCC
Q 017991 210 CLRVVISNLEVIAPA-E---SPNTDGIHISASRGVEVKNSIVGTGDDCISIVGNSSLIRIRNFACGPGHGISIGSLGKSN 285 (362)
Q Consensus 210 ~~nv~i~n~~I~~~~-~---~~~~DGI~~~~s~nv~I~n~~i~~gdD~i~i~s~~~ni~i~n~~~~~~~gi~igs~g~~~ 285 (362)
|+||+|+|++|.++. + ++|+||||+.+|+||+|+||+|.++||||+++++ +||+|+||+|.++||++|||+|+.
T Consensus 156 ~~nv~i~~~~I~~~~~d~~~~~NtDGidi~~s~nV~I~n~~i~~gDDcIaiksg-~nI~i~n~~~~~ghGisiGS~G~~- 233 (362)
T 1czf_A 156 ANDITFTDVTINNADGDTQGGHNTDAFDVGNSVGVNIIKPWVHNQDDCLAVNSG-ENIWFTGGTCIGGHGLSIGSVGDR- 233 (362)
T ss_dssp CSSEEEESCEEECGGGGTTTCCSCCSEEECSCEEEEEESCEEECSSCSEEESSE-EEEEEESCEEESSCCEEEEEECSS-
T ss_pred eCCEEEEEEEEECCccccccCCCCCceeecCcceEEEEeeEEecCCCEEEEeCC-eEEEEEEEEEeCCceeEEeecccc-
Confidence 999999999999964 3 7899999999999999999999999999999995 999999999999999999998765
Q ss_pred CcccEEeEEEEcEEEeCCceeEEEEeeCCCCceEEeEEEEeEEEecCC-ccEEEEeeeCCCCCCCCCCCCceee
Q 017991 286 SSVRIHDIMVYGALISNTQNGVRIKTWQGGSGSATNIQFLDVLMKNVS-NPIIIDQYYCDSPVPCANQVCNPYA 358 (362)
Q Consensus 286 ~~~~v~ni~i~n~~i~~~~~gi~i~~~~g~~g~i~ni~~~ni~~~~~~-~~i~i~~~y~~~~~~c~~~~~~~~~ 358 (362)
+.+.++||+|+|++|.++.+|++||+|++++|.|+||+|+||+|+++. +||.|+|.|++.. +|..+.+++.+
T Consensus 234 ~~~~v~nV~v~n~~~~~t~~GirIKt~~g~~G~v~nI~~~ni~~~~v~~~~i~I~~~Y~~~~-~~~~p~~~~~i 306 (362)
T 1czf_A 234 SNNVVKNVTIEHSTVSNSENAVRIKTISGATGSVSEITYSNIVMSGISDYGVVIQQDYEDGK-PTGKPTNGVTI 306 (362)
T ss_dssp SCCEEEEEEEEEEEEEEEEEEEEEEEETTCCEEEEEEEEEEEEEEEEEEEEEEEEEEEETTE-ECSCCCSSEEE
T ss_pred CCCCEEEEEEEeeEEECCceEEEEEEeCCCCceEeeEEEEeEEEECcccccEEEEEecCCCC-CCCCCCCCceE
Confidence 567999999999999999999999999999999999999999999997 6999999999853 44444444443
No 6
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=100.00 E-value=1.3e-50 Score=383.28 Aligned_cols=266 Identities=26% Similarity=0.460 Sum_probs=233.1
Q ss_pred chHHHHHHHHHHHcCCCCCcEEEEcCCcEEEeeee-eccCCCCCCceEEEEeEEECCCCCCCcCCCCccccEEEeceeeE
Q 017991 69 DDTEAFANAWKKACSFPARTKIVFSAGYTFLIHPI-DISGPCKSRLTLEISGTIVAPKDPDVWKGLNRRRWLYFNRVNHL 147 (362)
Q Consensus 69 ddt~aiq~Ai~~a~~~~gg~~v~~P~G~~Y~i~~l-~l~~~~~s~v~l~~~G~i~~~~~~~~~~~~~~~~~i~~~~~~ni 147 (362)
.||+|||+|++ +|++.++++|+||+| +|+. | .| +++++|+++|++.+. ...|.+ +|+.+.+ +|+
T Consensus 6 ~dt~aiq~ai~-~c~~~~g~~v~vP~G-~~~~--l~~l----~~~~~l~~~g~~~~~--~~~w~g----~~i~~~~-~nv 70 (339)
T 2iq7_A 6 TDAAAAIKGKA-SCTSIILNGIVVPAG-TTLD--MTGL----KSGTTVTFQGKTTFG--YKEWEG----PLISFSG-TNI 70 (339)
T ss_dssp SCHHHHHHHGG-GCSEEEEESCEECTT-CCEE--ECSC----CTTCEEEEESEEEEC--CCCSCC----CSEEEEE-ESC
T ss_pred CCHHHHHHHHH-HhhccCCCeEEECCC-EEEE--eecc----CCCeEEEEeCcEEcc--cccccC----cEEEEEc-ccE
Confidence 47999999999 577666789999999 8874 4 55 789999999988764 356653 6888876 999
Q ss_pred EEEec--cEEecCCCeeeecccccCCCCCCCCCCeEEEEEeecceEEEceEEeeCCCceeEEeceeeEEEEeEEEECCCC
Q 017991 148 TVQGG--GTINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKVQNLRVVNSQQMHIAFTNCLRVVISNLEVIAPAE 225 (362)
Q Consensus 148 ~I~G~--G~idG~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~nv~I~~v~i~n~~~~~i~~~~~~nv~i~n~~I~~~~~ 225 (362)
+|+|. |+|||+|..||..... ..+..||++|.|.+|+|++|++++++|+|.|++++..|++|+|+|++|.++.+
T Consensus 71 ~I~G~~gG~IdG~G~~~w~~~~~----~~~~~rp~~i~~~~~~nv~i~giti~nsp~~~i~i~~~~nv~i~~~~I~~~~~ 146 (339)
T 2iq7_A 71 NINGASGHSIDCQGSRWWDSKGS----NGGKTKPKFFYAHSLKSSNIKGLNVLNTPVQAFSINSATTLGVYDVIIDNSAG 146 (339)
T ss_dssp EEEECTTCEEECCGGGTCCSCGG----GSSSCCCCCEEEEEEEEEEEECCEEECCSSCCEEEESCEEEEEESCEEECGGG
T ss_pred EEEcCCCCEEECCcccccccccc----cCCCCCCeEEEEeeeCcEEEEEEEEEeCCcceEEEeccCCEEEEEEEEECCcc
Confidence 99997 7999999999984332 12467899999999999999999999999999999999999999999999743
Q ss_pred ----CCCCCeeeecCccCEEEEeeEEecCCccEEEcCCceeEEEEeeEEcCCceeEEeecCCCCCcccEEeEEEEcEEEe
Q 017991 226 ----SPNTDGIHISASRGVEVKNSIVGTGDDCISIVGNSSLIRIRNFACGPGHGISIGSLGKSNSSVRIHDIMVYGALIS 301 (362)
Q Consensus 226 ----~~~~DGI~~~~s~nv~I~n~~i~~gdD~i~i~s~~~ni~i~n~~~~~~~gi~igs~g~~~~~~~v~ni~i~n~~i~ 301 (362)
++|+|||++.+|+||+|+||+|.++||||+++++ +||+|+||+|.++||++|||+|+. ..+.++||+|+|++|.
T Consensus 147 d~~~~~ntDGid~~~s~nV~I~n~~i~~gDDciaiksg-~nI~i~n~~~~~ghGisiGSlg~~-~~~~v~nV~v~n~~~~ 224 (339)
T 2iq7_A 147 DSAGGHNTDAFDVGSSTGVYISGANVKNQDDCLAINSG-TNITFTGGTCSGGHGLSIGSVGGR-SDNTVKTVTISNSKIV 224 (339)
T ss_dssp GGTTCCSCCSEEEESCEEEEEESCEEECSSCSEEESSE-EEEEEESCEEESSCCEEEEEESSS-SCCEEEEEEEEEEEEE
T ss_pred ccccCCCCCcEEEcCcceEEEEecEEecCCCEEEEcCC-ccEEEEeEEEECCceEEECcCCcc-cCCCEEEEEEEeeEEE
Confidence 7899999999999999999999999999999994 999999999999999999998865 5679999999999999
Q ss_pred CCceeEEEEeeCCCCceEEeEEEEeEEEecCCc-cEEEEeeeCCCCCCCCCCCCce
Q 017991 302 NTQNGVRIKTWQGGSGSATNIQFLDVLMKNVSN-PIIIDQYYCDSPVPCANQVCNP 356 (362)
Q Consensus 302 ~~~~gi~i~~~~g~~g~i~ni~~~ni~~~~~~~-~i~i~~~y~~~~~~c~~~~~~~ 356 (362)
++.+|++||+|++++|.|+||+|+||+|+++++ ||.|+|.|++. .+|..+.+++
T Consensus 225 ~~~~girIkt~~g~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~-~~~~~p~~~~ 279 (339)
T 2iq7_A 225 NSDNGVRIKTVSGATGSVSGVTYSGITLSNIAKYGIVIEQDYENG-SPTGTPTNGV 279 (339)
T ss_dssp SCSEEEEEEEETTCCCEEEEEEEEEEEEEEESSEEEEEEEEEETT-EECSCCCSSS
T ss_pred CCCcEEEEEEeCCCCeEEEEEEEEeEEccCcccccEEEEeecCCC-CCCCCCCCCc
Confidence 999999999999989999999999999999987 99999999884 2344333333
No 7
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=100.00 E-value=1.4e-50 Score=382.70 Aligned_cols=266 Identities=26% Similarity=0.453 Sum_probs=232.4
Q ss_pred chHHHHHHHHHHHcCCCCCcEEEEcCCcEEEeeee-eccCCCCCCceEEEEeEEECCCCCCCcCCCCccccEEEeceeeE
Q 017991 69 DDTEAFANAWKKACSFPARTKIVFSAGYTFLIHPI-DISGPCKSRLTLEISGTIVAPKDPDVWKGLNRRRWLYFNRVNHL 147 (362)
Q Consensus 69 ddt~aiq~Ai~~a~~~~gg~~v~~P~G~~Y~i~~l-~l~~~~~s~v~l~~~G~i~~~~~~~~~~~~~~~~~i~~~~~~ni 147 (362)
.||+|||+|++ +|++.++++|+||+| +|+. | .| +++++|+++|++.+. ...|.+ +|+.+.+ +|+
T Consensus 6 ~~t~aiq~ai~-~c~~~gg~~v~vP~G-~~~~--l~~l----~~~~~l~~~g~~~~~--~~~w~g----~li~~~~-~nv 70 (336)
T 1nhc_A 6 TSASEASESIS-SCSDVVLSSIEVPAG-ETLD--LSDA----ADGSTITFEGTTSFG--YKEWKG----PLIRFGG-KDL 70 (336)
T ss_dssp SSHHHHHHHGG-GCSEEEEESCEECTT-CCEE--CTTC----CTTCEEEEESEEEEC--CCCSCC----CSEECCE-ESC
T ss_pred CCHHHHHHHHH-HhhccCCCeEEECCC-EEEE--eecc----CCCeEEEEeceEEcc--cccccC----cEEEEec-CCE
Confidence 57999999999 577666789999999 8863 4 55 789999999988764 355653 6888765 999
Q ss_pred EEEec--cEEecCCCeeeecccccCCCCCCCCCCeEEEEEeecceEEEceEEeeCCCceeEEeceeeEEEEeEEEECCCC
Q 017991 148 TVQGG--GTINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKVQNLRVVNSQQMHIAFTNCLRVVISNLEVIAPAE 225 (362)
Q Consensus 148 ~I~G~--G~idG~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~nv~I~~v~i~n~~~~~i~~~~~~nv~i~n~~I~~~~~ 225 (362)
+|+|. |+|||+|..||..... ..+..||++|.|..|+|++|++++++|+|.|++++. |++|+|+|++|.++.+
T Consensus 71 ~I~G~~gG~IdG~G~~~w~~~~~----~~~~~rp~~i~~~~~~nv~i~~i~i~nsp~~~i~i~-~~nv~i~~~~I~~~~~ 145 (336)
T 1nhc_A 71 TVTMADGAVIDGDGSRWWDSKGT----NGGKTKPKFMYIHDVEDSTFKGINIKNTPVQAISVQ-ATNVHLNDFTIDNSDG 145 (336)
T ss_dssp EEEECTTCEEECCGGGTCCSCTT----TSSSCCCCCEEEEEEEEEEEESCEEECCSSCCEEEE-EEEEEEESCEEECTTH
T ss_pred EEEcCCCeEEECCccccccccCc----CCCCCCceEEEEeeeCcEEEEEEEEEeCCccEEEEE-eCCEEEEEEEEECCCc
Confidence 99997 7999999999984321 124678999999999999999999999999999999 9999999999999854
Q ss_pred ----CCCCCeeeecCccCEEEEeeEEecCCccEEEcCCceeEEEEeeEEcCCceeEEeecCCCCCcccEEeEEEEcEEEe
Q 017991 226 ----SPNTDGIHISASRGVEVKNSIVGTGDDCISIVGNSSLIRIRNFACGPGHGISIGSLGKSNSSVRIHDIMVYGALIS 301 (362)
Q Consensus 226 ----~~~~DGI~~~~s~nv~I~n~~i~~gdD~i~i~s~~~ni~i~n~~~~~~~gi~igs~g~~~~~~~v~ni~i~n~~i~ 301 (362)
++|+||||+.+|+||+|+||+|.++||||+++++ +||+|+||+|.++||++|||+|++ ..+.++||+|+|++|.
T Consensus 146 d~~~~~ntDGidi~~s~nV~I~n~~i~~gDDciaiksg-~nI~i~n~~~~~ghGisiGS~g~~-~~~~v~nV~v~n~~~~ 223 (336)
T 1nhc_A 146 DDNGGHNTDGFDISESTGVYISGATVKNQDDCIAINSG-ESISFTGGTCSGGHGLSIGSVGGR-DDNTVKNVTISDSTVS 223 (336)
T ss_dssp HHHTCCSCCSEEECSCEEEEEESCEEESSSEEEEESSE-EEEEEESCEEESSSEEEEEEESSS-SCCEEEEEEEEEEEEE
T ss_pred ccccCCCCCcEEecCCCeEEEEeCEEEcCCCEEEEeCC-eEEEEEeEEEECCcCceEccCccc-cCCCEEEEEEEeeEEE
Confidence 7899999999999999999999999999999995 999999999999999999998765 5679999999999999
Q ss_pred CCceeEEEEeeCCCCceEEeEEEEeEEEecCCc-cEEEEeeeCCCCCCCCCCCCcee
Q 017991 302 NTQNGVRIKTWQGGSGSATNIQFLDVLMKNVSN-PIIIDQYYCDSPVPCANQVCNPY 357 (362)
Q Consensus 302 ~~~~gi~i~~~~g~~g~i~ni~~~ni~~~~~~~-~i~i~~~y~~~~~~c~~~~~~~~ 357 (362)
++.+|++||+|++++|.|+||+|+||+|+++++ ||.|+|.|++. .+|..+.+++.
T Consensus 224 ~t~~girIkt~~g~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~-~~~~~p~~~~~ 279 (336)
T 1nhc_A 224 NSANGVRIKTIYKETGDVSEITYSNIQLSGITDYGIVIEQDYENG-SPTGTPSTGIP 279 (336)
T ss_dssp SCSEEEEEEEETTCCCEEEEEEEEEEEEEEESSEEEEEEEEEETT-EECSCCCSSSC
T ss_pred CCCcEEEEEEECCCCCEEeeeEEeeEEeeccccccEEEEeecCCC-CCCCCCCCCce
Confidence 999999999999999999999999999999987 99999999984 34444444433
No 8
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=100.00 E-value=8e-50 Score=378.90 Aligned_cols=268 Identities=25% Similarity=0.413 Sum_probs=232.2
Q ss_pred hHHHHHHHHHHHcCCCCCcEEEEcCCcEEEeeee-eccCCCCCCceEEEEeEEECCCCCCCcCCCCccccEEEeceeeEE
Q 017991 70 DTEAFANAWKKACSFPARTKIVFSAGYTFLIHPI-DISGPCKSRLTLEISGTIVAPKDPDVWKGLNRRRWLYFNRVNHLT 148 (362)
Q Consensus 70 dt~aiq~Ai~~a~~~~gg~~v~~P~G~~Y~i~~l-~l~~~~~s~v~l~~~G~i~~~~~~~~~~~~~~~~~i~~~~~~ni~ 148 (362)
||+|||+|++ +|++.++++|+||+| +|+. | .| +++++|+++|++.+.. ..|. ..+|+.+.+ +|++
T Consensus 7 ~t~aiq~ai~-~c~~~gg~~v~vP~G-~~l~--l~~l----~~~~~l~~~g~~~~~~--~~w~---~g~~i~~~~-~ni~ 72 (349)
T 1hg8_A 7 EYSGLATAVS-SCKNIVLNGFQVPTG-KQLD--LSSL----QNDSTVTFKGTTTFAT--TADN---DFNPIVISG-SNIT 72 (349)
T ss_dssp SGGGHHHHHH-HCSEEEECCCEECTT-CCEE--ETTC----CTTCEEEECSEEEECC--CCCT---TCCSEEEEE-ESCE
T ss_pred CHHHHHHHHH-hccccCCCEEEECCC-EEEE--eecc----CCCeEEEEcCceeccc--cccc---CCceEEEEC-ccEE
Confidence 7899999999 577666789999999 8874 4 45 7799999999887643 5662 237888866 9999
Q ss_pred EEe--ccEEecCCCeeeecccccCCCCCCC-CCCeEEEE-E-eecceEEEceEEeeCCCceeEEeceeeEEEEeEEEECC
Q 017991 149 VQG--GGTINGMGQEWWSRSCKINTTNPCR-HAPTAITF-H-KCKNLKVQNLRVVNSQQMHIAFTNCLRVVISNLEVIAP 223 (362)
Q Consensus 149 I~G--~G~idG~G~~~~~~~~~~~~~~~~~-~~~~~i~~-~-~~~nv~I~~v~i~n~~~~~i~~~~~~nv~i~n~~I~~~ 223 (362)
|+| .|+|||+|..||..... ..+. .||++|.| . .|+|++|++++++|+|.|++++..|++|+|+|++|.++
T Consensus 73 I~G~~~G~IdG~G~~ww~~~~~----~~~~~~rP~~i~~~~~~~~nv~I~giti~nsp~~~i~i~~~~nv~i~~~~I~~~ 148 (349)
T 1hg8_A 73 ITGASGHVIDGNGQAYWDGKGS----NSNSNQKPDHFIVVQKTTGNSKITNLNIQNWPVHCFDITGSSQLTISGLILDNR 148 (349)
T ss_dssp EEECTTCEEECCGGGTCCSCTT----CTTSCCCCSEEEEEEEEESSEEEESCEEECCSSEEEEEESCEEEEEEEEEEECG
T ss_pred EEecCCCEEcCCcchhhhcccc----cCCCCCCCeEEEEeecCcCcEEEEEEEEEcCCCceEEEeccCCEEEEEEEEECC
Confidence 999 69999999999984321 1122 68999999 7 78899999999999999999999999999999999986
Q ss_pred C-C-----------CCCCCeeeecCccCEEEEeeEEecCCccEEEcCCceeEEEEeeEEcCCceeEEeecCCCCCcccEE
Q 017991 224 A-E-----------SPNTDGIHISASRGVEVKNSIVGTGDDCISIVGNSSLIRIRNFACGPGHGISIGSLGKSNSSVRIH 291 (362)
Q Consensus 224 ~-~-----------~~~~DGI~~~~s~nv~I~n~~i~~gdD~i~i~s~~~ni~i~n~~~~~~~gi~igs~g~~~~~~~v~ 291 (362)
. + .+|+|||++.+|+||+|+||+|.++||||++++ .+||+|+||+|.++||++|||+|+. +.+.++
T Consensus 149 ~~~~~~~~~~~~~~~~NtDGid~~~s~nV~I~n~~i~~gDDcIaiks-g~nI~i~n~~~~~ghGisiGS~G~~-~~~~v~ 226 (349)
T 1hg8_A 149 AGDKPNAKSGSLPAAHNTDGFDISSSDHVTLDNNHVYNQDDCVAVTS-GTNIVVSNMYCSGGHGLSIGSVGGK-SDNVVD 226 (349)
T ss_dssp GGSSCCTTTTTSCSCCSCCSEEEESCEEEEEEEEEEECSSCSEEESS-EEEEEEEEEEEESSCCEEEEEESSS-SCCEEE
T ss_pred CCccccccccccccCCCCCeEEEccccEEEEEeeEEecCCCeEEeeC-CeEEEEEeEEEeCCcceEEcccccc-ccCCEE
Confidence 3 2 489999999999999999999999999999999 5999999999999999999999875 668999
Q ss_pred eEEEEcEEEeCCceeEEEEeeCCCCceEEeEEEEeEEEecCC-ccEEEEeeeCCCCCCCCCCCCceee
Q 017991 292 DIMVYGALISNTQNGVRIKTWQGGSGSATNIQFLDVLMKNVS-NPIIIDQYYCDSPVPCANQVCNPYA 358 (362)
Q Consensus 292 ni~i~n~~i~~~~~gi~i~~~~g~~g~i~ni~~~ni~~~~~~-~~i~i~~~y~~~~~~c~~~~~~~~~ 358 (362)
||+|+|++|.++.+|++||+|++++|.|+||+|+||+|+++. +||.|+|.|++. .+|..+.+++.+
T Consensus 227 nV~v~n~~~~~~~~GirIKt~~g~~G~v~nI~~~ni~~~~v~~~~i~i~~~Y~~~-~~~~~p~~~~~i 293 (349)
T 1hg8_A 227 GVQFLSSQVVNSQNGCRIKSNSGATGTINNVTYQNIALTNISTYGVDVQQDYLNG-GPTGKPTNGVKI 293 (349)
T ss_dssp EEEEEEEEEEEEEEEEEEEEETTCCEEEEEEEEEEEEEEEEEEEEEEEEEEECSS-SBCSCCCSSEEE
T ss_pred EEEEEEEEEECCCcEEEEEecCCCCccccceEEEEEEEEccccccEEEEeeccCC-CCCCcccCCceE
Confidence 999999999999999999999998999999999999999997 699999999985 355555555544
No 9
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=100.00 E-value=1.4e-49 Score=376.08 Aligned_cols=253 Identities=25% Similarity=0.434 Sum_probs=226.2
Q ss_pred hHHHHHHHHHHHcCCCCCcEEEEcCCcEEEeeee-eccCCCCCCceEEEEeEEECCCCCCCcCCCCccccEEEeceeeEE
Q 017991 70 DTEAFANAWKKACSFPARTKIVFSAGYTFLIHPI-DISGPCKSRLTLEISGTIVAPKDPDVWKGLNRRRWLYFNRVNHLT 148 (362)
Q Consensus 70 dt~aiq~Ai~~a~~~~gg~~v~~P~G~~Y~i~~l-~l~~~~~s~v~l~~~G~i~~~~~~~~~~~~~~~~~i~~~~~~ni~ 148 (362)
-++|||+|++ +|++.++++|+||+| +|+. | .| +++++|+++|++.+. ...|.+ +|+.+.+ +|++
T Consensus 11 g~~aiq~ai~-~c~~~gg~~v~vP~G-~~l~--l~~l----~~~~~l~~~g~~~~~--~~~w~g----~li~~~~-~nv~ 75 (339)
T 1ia5_A 11 GASSASKSKT-SCSTIVLSNVAVPSG-TTLD--LTKL----NDGTHVIFSGETTFG--YKEWSG----PLISVSG-SDLT 75 (339)
T ss_dssp HHHHHHHHGG-GCSEEEEESCEECTT-CCEE--ECSC----CTTCEEEEESEEEEC--CCCSCC----CSEEEEE-ESCE
T ss_pred chHHHHHHHH-HhhccCCCeEEECCC-EEEE--eecc----CCCeEEEEeCcEEcc--cccccC----cEEEEEc-CcEE
Confidence 3689999999 577666789999999 8873 4 56 789999999988764 355653 7888876 9999
Q ss_pred EEec--cEEecCCCeeeecccccCCCCCCCCCCeEEEEEeecceEEEceEEeeCCCceeEEeceeeEEEEeEEEECCCC-
Q 017991 149 VQGG--GTINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKVQNLRVVNSQQMHIAFTNCLRVVISNLEVIAPAE- 225 (362)
Q Consensus 149 I~G~--G~idG~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~nv~I~~v~i~n~~~~~i~~~~~~nv~i~n~~I~~~~~- 225 (362)
|+|. |+|||+|..||..... ..+..||++|.|..|+|++|++++++|+|.|++++..|++|+|+|++|.++.+
T Consensus 76 I~G~~gG~IdG~G~~~w~~~~~----~~~~~rp~~i~~~~~~nv~i~~i~i~nsp~~~i~i~~~~nv~i~~~~I~~~~~d 151 (339)
T 1ia5_A 76 ITGASGHSINGDGSRWWDGEGG----NGGKTKPKFFAAHSLTNSVISGLKIVNSPVQVFSVAGSDYLTLKDITIDNSDGD 151 (339)
T ss_dssp EEECTTCEEECCGGGTCSSCTT----TSSSCCCCCEEEEEEEEEEEESCEEECCSSCCEEEESCEEEEEESCEEECGGGT
T ss_pred EEcCCCeEEeCCCCcccccccc----CCCCCCCeEEEEeecCcEEEEEEEEEcCCcceEEEecccCeEEeeEEEECCccc
Confidence 9997 7999999999984321 12467899999999999999999999999999999999999999999998743
Q ss_pred ---CCCCCeeeecCccCEEEEeeEEecCCccEEEcCCceeEEEEeeEEcCCceeEEeecCCCCCcccEEeEEEEcEEEeC
Q 017991 226 ---SPNTDGIHISASRGVEVKNSIVGTGDDCISIVGNSSLIRIRNFACGPGHGISIGSLGKSNSSVRIHDIMVYGALISN 302 (362)
Q Consensus 226 ---~~~~DGI~~~~s~nv~I~n~~i~~gdD~i~i~s~~~ni~i~n~~~~~~~gi~igs~g~~~~~~~v~ni~i~n~~i~~ 302 (362)
++|+|||++.+|+||+|+||+|.++||||+++++ +||+|+||+|.++||++|||+|+. ..+.++||+|+|++|.+
T Consensus 152 ~~~~~ntDGid~~~s~nV~I~n~~i~~gDDcIaiksg-~nI~i~n~~~~~ghGisiGS~g~~-~~~~v~nV~v~n~~~~~ 229 (339)
T 1ia5_A 152 DNGGHNTDAFDIGTSTYVTISGATVYNQDDCVAVNSG-ENIYFSGGYCSGGHGLSIGSVGGR-SDNTVKNVTFVDSTIIN 229 (339)
T ss_dssp TTTCCSCCSEEEESCEEEEEESCEEECSSCSEEESSE-EEEEEESCEEESSSCEEEEEECSS-SCCEEEEEEEEEEEEES
T ss_pred cccCCCCCcEEecCCceEEEEeeEEEcCCCeEEEeCC-eEEEEEeEEEECCceEEECcCCcc-cCCCEEEEEEEeeEEEC
Confidence 6899999999999999999999999999999994 999999999999999999998765 56789999999999999
Q ss_pred CceeEEEEeeCCCCceEEeEEEEeEEEecCCc-cEEEEeeeC
Q 017991 303 TQNGVRIKTWQGGSGSATNIQFLDVLMKNVSN-PIIIDQYYC 343 (362)
Q Consensus 303 ~~~gi~i~~~~g~~g~i~ni~~~ni~~~~~~~-~i~i~~~y~ 343 (362)
+.+|++||+|++++|.|+||+|+||+|+++++ ||.|+|.|.
T Consensus 230 t~~girIKt~~g~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~ 271 (339)
T 1ia5_A 230 SDNGVRIKTNIDTTGSVSDVTYKDITLTSIAKYGIVVQQNYG 271 (339)
T ss_dssp CSEEEEEEEETTCCCEEEEEEEEEEEEEEESSEEEEEEEEET
T ss_pred CCcEEEEEEeCCCCcEEEeeEEEEEEEECcccccEEEEccCC
Confidence 99999999999999999999999999999987 999999993
No 10
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=100.00 E-value=2.7e-50 Score=379.58 Aligned_cols=247 Identities=24% Similarity=0.402 Sum_probs=222.1
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEcCCcEEEeeeeeccCCCCCCceEEEEeEEECCCCCCCcCCCCccccEEEeceeeEEEE
Q 017991 71 TEAFANAWKKACSFPARTKIVFSAGYTFLIHPIDISGPCKSRLTLEISGTIVAPKDPDVWKGLNRRRWLYFNRVNHLTVQ 150 (362)
Q Consensus 71 t~aiq~Ai~~a~~~~gg~~v~~P~G~~Y~i~~l~l~~~~~s~v~l~~~G~i~~~~~~~~~~~~~~~~~i~~~~~~ni~I~ 150 (362)
++|||+ ++ +|++.++++|+||+| +|+ .|.| +++++|+++|++.+.. ..|.+ +|+.+.+ +|++|+
T Consensus 8 ~~aiq~-i~-aC~~~gg~~v~vP~G-~~l--~l~l----~~~~~l~~~g~~~~~~--~~w~~----~~i~~~~-~ni~I~ 71 (335)
T 1k5c_A 8 VDDAKD-IA-GCSAVTLNGFTVPAG-NTL--VLNP----DKGATVTMAGDITFAK--TTLDG----PLFTIDG-TGINFV 71 (335)
T ss_dssp TTGGGG-CT-TCSEEEECCEEECTT-CCE--EECC----CTTCEEEECSCEEECC--CCSCS----CSEEEEE-EEEEEE
T ss_pred HHHhHH-HH-hcccCCCCEEEECCC-EEE--EEEe----CCCeEEEEeccEeccc--ccccC----cEEEEEc-cCEEEE
Confidence 689999 88 687777789999999 876 4566 8999999999988643 56764 7898875 999999
Q ss_pred e-ccEEecCCCeeeecccccCCCCCCCCCCeEEEEEeecceEEEceEEeeCCCceeEEeceee-EEEEeEEEECCCC---
Q 017991 151 G-GGTINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKVQNLRVVNSQQMHIAFTNCLR-VVISNLEVIAPAE--- 225 (362)
Q Consensus 151 G-~G~idG~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~nv~I~~v~i~n~~~~~i~~~~~~n-v~i~n~~I~~~~~--- 225 (362)
| .|+|||+|..||..... ..+..||++|.|..|+ ++|++++++|+|.|++++..|++ |+|+|++|.++.+
T Consensus 72 G~~G~idG~G~~ww~~~~~----~~~~~rP~~i~~~~~~-v~i~giti~nsp~~~i~i~~~~n~v~i~~v~I~~~~~d~~ 146 (335)
T 1k5c_A 72 GADHIFDGNGALYWDGKGT----NNGTHKPHPFLKIKGS-GTYKKFEVLNSPAQAISVGPTDAHLTLDGITVDDFAGDTK 146 (335)
T ss_dssp CTTCEEECCGGGTCCSCTT----TSSSCCCCCSEEEEEE-EEEESCEEESCSSCCEEEEEEEEEEEEESCEEECGGGGGG
T ss_pred eCccEEcCChhHhhhcccc----cCCCCCCeEEEEeceE-EEEEEEEEECCCcceEEEEccCCeEEEEEEEEECCCCccc
Confidence 9 59999999999974321 1246799999999999 99999999999999999999999 9999999999743
Q ss_pred --CCCCCeeeecCccCEEEEeeEEecCCccEEEcCCceeEEEEeeEEcCCceeEEeecCCCCCcccEEeEEEEcEEEeCC
Q 017991 226 --SPNTDGIHISASRGVEVKNSIVGTGDDCISIVGNSSLIRIRNFACGPGHGISIGSLGKSNSSVRIHDIMVYGALISNT 303 (362)
Q Consensus 226 --~~~~DGI~~~~s~nv~I~n~~i~~gdD~i~i~s~~~ni~i~n~~~~~~~gi~igs~g~~~~~~~v~ni~i~n~~i~~~ 303 (362)
++|+||||+ +|+||+|+||+|.++||||+++++ +||+|+||+|.++||++|||+++ .+.++||+|+|++|.++
T Consensus 147 ~~~~NtDGidi-~s~nV~I~n~~i~~gDDcIaiksg-~nI~i~n~~~~~ghGisIGS~g~---~~~v~nV~v~n~~~~~t 221 (335)
T 1k5c_A 147 NLGHNTDGFDV-SANNVTIQNCIVKNQDDCIAINDG-NNIRFENNQCSGGHGISIGSIAT---GKHVSNVVIKGNTVTRS 221 (335)
T ss_dssp GCCCSCCSEEE-ECSSEEEESCEEESSSCSEEEEEE-EEEEEESCEEESSCCEEEEEECT---TCEEEEEEEESCEEEEE
T ss_pred ccCCCCCeEcc-cCCeEEEEeeEEEcCCCEEEeeCC-eeEEEEEEEEECCccCeEeeccC---CCCEEEEEEEeeEEECC
Confidence 789999999 999999999999999999999995 99999999999999999999753 57899999999999999
Q ss_pred ceeEEEEeeCCCC-ceEEeEEEEeEEEecCC-ccEEEEeeeC
Q 017991 304 QNGVRIKTWQGGS-GSATNIQFLDVLMKNVS-NPIIIDQYYC 343 (362)
Q Consensus 304 ~~gi~i~~~~g~~-g~i~ni~~~ni~~~~~~-~~i~i~~~y~ 343 (362)
.+|++||+|++++ |.|+||+|+||+|++++ +||.|+|.|.
T Consensus 222 ~~girIKt~~g~~~G~v~nI~f~ni~~~~v~~~~i~i~~~Y~ 263 (335)
T 1k5c_A 222 MYGVRIKAQRTATSASVSGVTYDANTISGIAKYGVLISQSYP 263 (335)
T ss_dssp EEEEEEEEETTCCSCEEEEEEEESCEEEEEEEEEEEEEEEET
T ss_pred CceEEEEEeCCCCcceEeeeEEEEEEEEccccccEEEEeeCC
Confidence 9999999999988 99999999999999997 6999999993
No 11
>2x6w_A Tail spike protein; viral protein, beta-helix, hydrolase; HET: RAM GLC GLA NAG NDG; 1.35A {Enterobacteria phage HK620} PDB: 2vji_A 2vjj_A* 2x85_A* 2x6x_A* 2x6y_A*
Probab=100.00 E-value=9.4e-45 Score=355.87 Aligned_cols=247 Identities=17% Similarity=0.090 Sum_probs=213.0
Q ss_pred CCCeeEEeeeccccCCCCcchHHHHHHHHHHHcCCCCCcEEEEcCCcEEEe------------eeeeccCCCCCCceEEE
Q 017991 50 KSKRVIFVGDFGAKGDGFNDDTEAFANAWKKACSFPARTKIVFSAGYTFLI------------HPIDISGPCKSRLTLEI 117 (362)
Q Consensus 50 ~~~~~~~v~~~Ga~~dg~~ddt~aiq~Ai~~a~~~~gg~~v~~P~G~~Y~i------------~~l~l~~~~~s~v~l~~ 117 (362)
..+.+++|++|||++| ||+|||+||+ +|++.++++|+||+|++|++ ++|.| +|+++|++
T Consensus 47 ~~~~~~nV~dfGA~gD----dT~AIqkAId-aCs~~GGgtV~VPaG~tYLt~sv~~gp~~~~sGpI~L----kSnVtL~L 117 (600)
T 2x6w_A 47 HCDPSGNVIQPGPNVD----SRQYLQAAID-YVSSNGGGTITIPAGYTWYLGSYGVGGIAGHSGIIQL----RSNVNLNI 117 (600)
T ss_dssp CBCTTSCBCCCCTTCC----CHHHHHHHHH-HHHHTTCEEEEECTTCEEEECSCCCGGGGGGTEEEEC----CTTEEEEE
T ss_pred CCCcEEeeecCCCCcc----CHHHHHHHHH-HhhhcCCCEEEECCCCEEEecccccccccccccceEE----cCceEEee
Confidence 3456899999999998 9999999999 56656689999999989999 89999 89999999
Q ss_pred EeEEECCCCCCCcCCC-----CccccEEEeceeeEEEEeccEEecCCCeeeecccccCCCCCCCCCCeEEEEEeecceEE
Q 017991 118 SGTIVAPKDPDVWKGL-----NRRRWLYFNRVNHLTVQGGGTINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKV 192 (362)
Q Consensus 118 ~G~i~~~~~~~~~~~~-----~~~~~i~~~~~~ni~I~G~G~idG~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~nv~I 192 (362)
+|+|+++.+++.|+.. .-..+|.+.+++|++|+|.|+|||+|..||.... ....||+ +.+.+|+ |
T Consensus 118 dGtL~as~d~~~yp~~~~v~~~w~slI~~~~~~NItItG~GtIDGqG~~wW~~~~------~~~~RP~-l~f~~c~---I 187 (600)
T 2x6w_A 118 EGRIHLSPFFDLKPFQVFVGFDNGDPASSGNLENCHIYGHGVVDFGGYEFGASSQ------LRNGVAF-GRSYNCS---V 187 (600)
T ss_dssp CSEEEECGGGTTSCEEEEECCSSSSGGGCCCEEEEEEESSCEEECTTCCCSSTTC------CEEEEEC-CSEEEEE---E
T ss_pred ecEEEEcCChHHCcccccccccccceEEEecceeEEEecceeeeCCccccccccc------cCCCCCE-EEEeeeE---E
Confidence 9999999988888531 1124488899999999999999999999996221 0114677 7888888 9
Q ss_pred EceEEeeC-CCceeEE---eceeeEEEEeEE----EECCCCCCCCCeeeecCccCEEEEeeEEecCCccEEE-cCCce-e
Q 017991 193 QNLRVVNS-QQMHIAF---TNCLRVVISNLE----VIAPAESPNTDGIHISASRGVEVKNSIVGTGDDCISI-VGNSS-L 262 (362)
Q Consensus 193 ~~v~i~n~-~~~~i~~---~~~~nv~i~n~~----I~~~~~~~~~DGI~~~~s~nv~I~n~~i~~gdD~i~i-~s~~~-n 262 (362)
+|++++|+ |.|++++ ..|+||+|+|++ |.+ ++|+||| |+|+||+|.++||||++ |++.. +
T Consensus 188 ~GITi~NSDP~w~I~iG~~~~c~NVtI~nvtfi~aI~s---spNTDGI-------V~I~nc~I~tGDDCIAI~KSGs~~n 257 (600)
T 2x6w_A 188 TGITFQNGDVTWAITLGWNGYGSNCYVRKCRFINLVNS---SVNADHS-------TVYVNCPYSGVESCYFSMSSSFARN 257 (600)
T ss_dssp ESCEEESCCCSCSEEECBTTBEEEEEEESCEEECCCCC---SSCCCEE-------EEEECSSSEEEESCEEECCCTTHHH
T ss_pred eCeEEECCCCccEEEeCCCCCcccEEEeCeEEcceEec---CCCCCEE-------EEEEeeEEecCCcEEEEecCCCcCC
Confidence 99999999 9999999 999999999999 776 6899999 99999999999999999 99863 4
Q ss_pred EEEEeeEEcCCc-eeEEeecCCCCCcccEEeEEEEcEEEeCCceeEEEEeeCCCCceEEeEEEEeEEEecCCccEEEEee
Q 017991 263 IRIRNFACGPGH-GISIGSLGKSNSSVRIHDIMVYGALISNTQNGVRIKTWQGGSGSATNIQFLDVLMKNVSNPIIIDQY 341 (362)
Q Consensus 263 i~i~n~~~~~~~-gi~igs~g~~~~~~~v~ni~i~n~~i~~~~~gi~i~~~~g~~g~i~ni~~~ni~~~~~~~~i~i~~~ 341 (362)
+.++ +|.++| |++||| +..+.++||+|+| +||++.+++|.|+||+|+||+|++++.+|.+++.
T Consensus 258 i~~e--~~~~GHgGISIGS----e~~ggV~NV~V~N----------rIKt~~G~GG~V~NItfeNI~m~nV~~~I~i~q~ 321 (600)
T 2x6w_A 258 IACS--VQLHQHDTFYRGS----TVNGYCRGAYVVM----------HAAEAAGAGSYAYNMQVENNIAVIYGQFVILGSD 321 (600)
T ss_dssp HEEE--EEECSSSEEEESC----EEEEESEEEEEEE----------CGGGCTTTCSEEEEEEEESCEEEESSEEEEEEEC
T ss_pred eEEE--EEcCCCCcEEecc----cccCcEEEEEEEE----------EEEeecCCCceEEEEEEEEEEEEccceEEEeCCC
Confidence 6777 677777 899999 4667899999998 6677777889999999999999999999988875
No 12
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=100.00 E-value=4.1e-38 Score=306.44 Aligned_cols=254 Identities=17% Similarity=0.179 Sum_probs=207.6
Q ss_pred CCCCCCeeEE-eeeccccCCCCcchHHHHHHHHHHHcCCCCCcEEEEcCCcEEEeeeeeccCCCCCCceEEEE--eEEEC
Q 017991 47 TRSKSKRVIF-VGDFGAKGDGFNDDTEAFANAWKKACSFPARTKIVFSAGYTFLIHPIDISGPCKSRLTLEIS--GTIVA 123 (362)
Q Consensus 47 ~~~~~~~~~~-v~~~Ga~~dg~~ddt~aiq~Ai~~a~~~~gg~~v~~P~G~~Y~i~~l~l~~~~~s~v~l~~~--G~i~~ 123 (362)
++..+...++ |++|||+|||++|||+|||+||+++++.+++++|+||+| +|++++|.| +++++|+++ ++|.+
T Consensus 14 ~p~~~~~~~~~V~dfGA~gDG~tDdT~Aiq~Aidac~~~~ggg~V~vP~G-tYl~g~I~l----ks~v~L~l~~GatL~~ 88 (464)
T 1h80_A 14 APTQQDVNYDLVDDFGANGNDTSDDSNALQRAINAISRKPNGGTLLIPNG-TYHFLGIQM----KSNVHIRVESDVIIKP 88 (464)
T ss_dssp CCSCCSEEEEHHHHHCCCTTSSSBCHHHHHHHHHHHHTSTTCEEEEECSS-EEEECSEEC----CTTEEEEECTTCEEEE
T ss_pred CCCCCcceeeehhccCcCCCCCchhHHHHHHHHHHHhhccCCcEEEECCC-eEEEeeEec----cCceEEEEcCCcEEEe
Confidence 3445667888 999999999999999999999995444336799999999 999999999 899999998 57777
Q ss_pred CCC--CCCcCCCCccccEEE---eceeeEEEEecc---EEecCCCeeeecccccCCCCCCCCCCeEEEEEeecceEEEce
Q 017991 124 PKD--PDVWKGLNRRRWLYF---NRVNHLTVQGGG---TINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKVQNL 195 (362)
Q Consensus 124 ~~~--~~~~~~~~~~~~i~~---~~~~ni~I~G~G---~idG~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~nv~I~~v 195 (362)
+.+ ...| +++.+ .+++|++|+|.| +|||+|.. ..+|++|.|.+|+|++|+++
T Consensus 89 s~~td~~~y------~~~~~~~~~~~~nItI~G~Gg~~~iDG~G~~--------------~~rp~~i~~~~~~Nv~I~gI 148 (464)
T 1h80_A 89 TWNGDGKNH------RLFEVGVNNIVRNFSFQGLGNGFLVDFKDSR--------------DKNLAVFKLGDVRNYKISNF 148 (464)
T ss_dssp CCCTTCSCE------EEEEESSSSCEEEEEEEECTTCEEEECTTCS--------------CCBEEEEEECSEEEEEEEEE
T ss_pred ccCCCcccC------CceEeecccCccceEEECcCcceEEeCCCCC--------------CCCceEEEEEeeccEEEeee
Confidence 653 3332 23333 789999999998 88888742 35788999999999999999
Q ss_pred EEeeCCCceeEEeceeeEEEEeEEEECCCCCCCCCeeeecCccCEEEEeeEEecCCccEE--EcCCceeEEEEeeEEcCC
Q 017991 196 RVVNSQQMHIAFTNCLRVVISNLEVIAPAESPNTDGIHISASRGVEVKNSIVGTGDDCIS--IVGNSSLIRIRNFACGPG 273 (362)
Q Consensus 196 ~i~n~~~~~i~~~~~~nv~i~n~~I~~~~~~~~~DGI~~~~s~nv~I~n~~i~~gdD~i~--i~s~~~ni~i~n~~~~~~ 273 (362)
+++| .|.++ .|.+|.+ . ++|||++ .|+||+|+||+|.++||++. ...+++||+|+||+|.++
T Consensus 149 ti~n--~w~ih--~s~~V~i-----~------NtDGi~i-~s~nV~I~n~~I~~gddgiGs~~~~~~~NV~V~n~~~~gg 212 (464)
T 1h80_A 149 TIDD--NKTIF--ASILVDV-----T------ERNGRLH-WSRNGIIERIKQNNALFGYGLIQTYGADNILFRNLHSEGG 212 (464)
T ss_dssp EEEC--CSCBS--CSEEECE-----E------EETTEEE-EEEEEEEEEEEEESCCTTCEEEEESEEEEEEEEEEEEESS
T ss_pred EEec--cceEe--eceeeee-----e------cCCCcee-eccCEEEeceEEecCCCeEEecccCCEeEEEEEeeEEECC
Confidence 9999 55543 4433322 1 6899998 78999999999999999875 234589999999999998
Q ss_pred ceeEEeecC----CCCCcccEEeEEEEcEEEeCCceeEEEEeeCCCCceEEeEEEEeEEEecCCccEEEEeeeCCC
Q 017991 274 HGISIGSLG----KSNSSVRIHDIMVYGALISNTQNGVRIKTWQGGSGSATNIQFLDVLMKNVSNPIIIDQYYCDS 345 (362)
Q Consensus 274 ~gi~igs~g----~~~~~~~v~ni~i~n~~i~~~~~gi~i~~~~g~~g~i~ni~~~ni~~~~~~~~i~i~~~y~~~ 345 (362)
+|+.|.+-+ . ...+.++||+|+|++|.+...+|+|++.. +.++||+|+||+++++..||.|+|.||+.
T Consensus 213 ~GIrIktg~d~IG~-~~~g~v~NI~~~Ni~~~nv~~~I~I~p~~---~~isnItfeNI~~t~~~~aI~i~q~y~~~ 284 (464)
T 1h80_A 213 IALRMETDNLLMKN-YKQGGIRNIFADNIRCSKGLAAVMFGPHF---MKNGDVQVTNVSSVSCGSAVRSDSGFVEL 284 (464)
T ss_dssp EEEEEECCCHHHHH-HTCCEEEEEEEEEEEEESSSEEEEEECTT---CBCCCEEEEEEEEESSSCSEEECCCCCEE
T ss_pred CEEEEEeCCceecc-CCCCcEEEEEEEeEEEECCceeEEEeCCC---ceEeEEEEEEEEEEccceeEEEecCcccc
Confidence 889887620 1 24568999999999999999999999532 47899999999999999999999999864
No 13
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=100.00 E-value=3.4e-38 Score=311.04 Aligned_cols=248 Identities=18% Similarity=0.193 Sum_probs=196.2
Q ss_pred CCeeEEeeeccccCCCCcchHHHHHHHHHHHcCCCCCcEEEEcCCcEEEe-eeeeccCCCCCCceEEEEe----EEECCC
Q 017991 51 SKRVIFVGDFGAKGDGFNDDTEAFANAWKKACSFPARTKIVFSAGYTFLI-HPIDISGPCKSRLTLEISG----TIVAPK 125 (362)
Q Consensus 51 ~~~~~~v~~~Ga~~dg~~ddt~aiq~Ai~~a~~~~gg~~v~~P~G~~Y~i-~~l~l~~~~~s~v~l~~~G----~i~~~~ 125 (362)
++.+++|++|||+|||++|||+|||+||++ +++|+||+| +|++ ++|.| +++++|.+++ +|.++.
T Consensus 19 ~~~~~nV~dfGA~gDG~tDdT~Aiq~Ai~~------Gg~V~iP~G-tYlis~~l~l----~snv~L~g~g~~~t~L~~~~ 87 (609)
T 3gq8_A 19 KQFGVSVKTYGAKGDGVTDDIRAFEKAIES------GFPVYVPYG-TFMVSRGIKL----PSNTVLTGAGKRNAVIRFMD 87 (609)
T ss_dssp CSSSEEGGGGTCCCEEEEECHHHHHHHHHT------SSCEEECSE-EEEESSCEEE----CSSEEEEESCTTTEEEEECT
T ss_pred CCcEEEeEecccCCCCCchhHHHHHHHHHc------CCEEEECCc-cEEEeCceEE----CCCcEEEEeeCCCCEEEeCC
Confidence 346899999999999999999999999993 489999999 9999 99999 8999999985 666665
Q ss_pred CCCCcCCCCccccEEEeceeeEEEEeccEEecCCCeeeecccccCCCCCCCCCCeEEEEEeecceEEEceEEeeCCCcee
Q 017991 126 DPDVWKGLNRRRWLYFNRVNHLTVQGGGTINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKVQNLRVVNSQQMHI 205 (362)
Q Consensus 126 ~~~~~~~~~~~~~i~~~~~~ni~I~G~G~idG~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~nv~I~~v~i~n~~~~~i 205 (362)
+.+.|.. ....++++.+.+||+|+|. +|||+|..||.. . ..++..||++|.|..|+|++|++++++|++.+++
T Consensus 88 ~~p~~~~-li~~lI~a~~~~NItItG~-TIDGNG~~~g~~-~----~~~g~~RP~lI~f~~c~NV~I~gVti~NSp~~gI 160 (609)
T 3gq8_A 88 SVGRGES-LMYNENVTTGNENIFLSSF-TLDGNNKRLGQG-I----SGIGGSRESNLSIRACHNVYIRDIEAVDCTLHGI 160 (609)
T ss_dssp TCCSSCC-SEEESCTTTCCEEEEEEEE-EEECCGGGGCSS-C----CCSSTTTTCSEEEESCEEEEEEEEEEESCSSCSE
T ss_pred CCCCCCc-eeeeeeeecccccEEEEee-EEECCccccCcc-c----ccCCCCCccEEEEEeeceEEEEeeEEEeCCCCCe
Confidence 4433311 1123456778999999995 999999844331 1 1234579999999999999999999999998554
Q ss_pred EEeceeeEEEEeEEEECCCCCCCCCeeeecC------ccCEEEEeeEEe-cCCccEEEcCCceeEEEEeeEEcC------
Q 017991 206 AFTNCLRVVISNLEVIAPAESPNTDGIHISA------SRGVEVKNSIVG-TGDDCISIVGNSSLIRIRNFACGP------ 272 (362)
Q Consensus 206 ~~~~~~nv~i~n~~I~~~~~~~~~DGI~~~~------s~nv~I~n~~i~-~gdD~i~i~s~~~ni~i~n~~~~~------ 272 (362)
+|.++.. + ||+++++ |+||+|+||+|+ ++||||++++ ++||+|+||+|.+
T Consensus 161 -------------~I~~~~~--N-DGid~DGi~fd~~S~NV~I~Nc~I~~tGDDcIaIks-seNI~I~Nc~~~gp~G~S~ 223 (609)
T 3gq8_A 161 -------------DITCGGL--D-YPYLGDGTTAPNPSENIWIENCEATGFGDDGITTHH-SQYINILNCYSHDPRLTAN 223 (609)
T ss_dssp -------------EEECSSS--S-CCCCCTTCCCSSCCEEEEEESCEEESCSSCSEEECS-CEEEEEESCEEECCSSCSS
T ss_pred -------------EEeCCCC--C-ccccCCCccccccceeEEEEeeEEEecCCCEEEecC-CeeEEEEeEEEECCCCCCC
Confidence 3444432 2 6777766 999999999995 5999999988 9999999999943
Q ss_pred CceeEEeecCCCCCcccEEeEEEEcEEEeCCceeEEEEeeCCCCceEEeEEEEeE-EEecCC-ccEEEEeee
Q 017991 273 GHGISIGSLGKSNSSVRIHDIMVYGALISNTQNGVRIKTWQGGSGSATNIQFLDV-LMKNVS-NPIIIDQYY 342 (362)
Q Consensus 273 ~~gi~igs~g~~~~~~~v~ni~i~n~~i~~~~~gi~i~~~~g~~g~i~ni~~~ni-~~~~~~-~~i~i~~~y 342 (362)
++|++|++ ..+||+|+||++.++.+|++||++.+ .+.++||.|+|. .++++. ..+...++|
T Consensus 224 ~~GIsIGs--------gs~NVtV~Nc~i~nt~~GIrIKt~~~-~~~v~NV~I~n~vs~~nvrsyn~r~iG~~ 286 (609)
T 3gq8_A 224 CNGFEIDD--------GSRHVVLSNNRSKGCYGGIEIKAHGD-APAAYNISINGHMSVEDVRSYNFRHIGHH 286 (609)
T ss_dssp CCSEEECT--------TCEEEEEESEEEESSSEEEEEEECTT-SCCCEEEEEEEEEEESCSEEEEEEETTSC
T ss_pred cccEEccC--------CcccEEEEeeEEECCCCEEEEEecCC-CCccccEEEECCEeecCceEecceEEccc
Confidence 46899986 23999999999999999999998654 478999999984 555543 245544444
No 14
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=100.00 E-value=4.8e-38 Score=314.32 Aligned_cols=238 Identities=19% Similarity=0.228 Sum_probs=192.1
Q ss_pred CCeeEEeeeccccCCCCcchHHHHHHHHHHHcCCCCCcEEEEcCCcEEEe-eeeeccCCCCCCceEEEEe----EEECCC
Q 017991 51 SKRVIFVGDFGAKGDGFNDDTEAFANAWKKACSFPARTKIVFSAGYTFLI-HPIDISGPCKSRLTLEISG----TIVAPK 125 (362)
Q Consensus 51 ~~~~~~v~~~Ga~~dg~~ddt~aiq~Ai~~a~~~~gg~~v~~P~G~~Y~i-~~l~l~~~~~s~v~l~~~G----~i~~~~ 125 (362)
++.+++|++|||+|||++|||+|||+||++ +++|+||+| +|++ ++|.| +++++|.+++ +|.++.
T Consensus 19 ~~~~~nV~dfGA~gDG~tDdT~Aiq~Ai~a------Gg~V~IPaG-tYlisg~I~L----~snv~L~Geg~~~t~Lk~~~ 87 (772)
T 3gqn_A 19 KQFGVSVKTYGAKGDGVTDDIRAFEKAIES------GFPVYVPYG-TFMVSRGIKL----PSNTVLTGAGKRNAVIRFMD 87 (772)
T ss_dssp CSSSEESGGGTCCCEEEEECHHHHHHHHHT------TSCEEECSE-EEEESSCEEE----CSSCEEEEEEEEEEEEEECT
T ss_pred CCcEEEeEecccCCCCChhHHHHHHHHHHc------CCEEEECCc-cEEEEeEEEE----CCCcEEEEecCCCCEEEeCC
Confidence 446899999999999999999999999993 389999999 9999 99999 8999999985 566665
Q ss_pred CCCCcCCCCccccEEEeceeeEEEEeccEEecCCCeeeecccccCCCCCCCCCCeEEEEEeecceEEEceEEeeCCCcee
Q 017991 126 DPDVWKGLNRRRWLYFNRVNHLTVQGGGTINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKVQNLRVVNSQQMHI 205 (362)
Q Consensus 126 ~~~~~~~~~~~~~i~~~~~~ni~I~G~G~idG~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~nv~I~~v~i~n~~~~~i 205 (362)
+.+.|.. ....|+++.+++||+|+|. +|||+|..||.. . ..++..||.+|.|.+|+|++|++++++|++.+++
T Consensus 88 d~p~~~~-li~~lI~a~gveNItItG~-TIDGNG~~~g~~-~----~~~g~~RP~lI~f~~ckNV~I~gVti~NSp~~gI 160 (772)
T 3gqn_A 88 SVGRGES-LMYNENVTTGNENIFLSSF-TLDGNNKRLGQG-I----SGIGGSRESNLSIRACHNVYIRDIEAVDCTLHGI 160 (772)
T ss_dssp TCCSSCC-SEEESCTTTCCEEEEEEEE-EEECCGGGGCSS-C----CCSSTTTTCSEEEESCEEEEEEEEEEESCSSCSE
T ss_pred CCCCCCc-eeeeeeeccCceeEEEEee-EEeCCccccCcc-c----ccCCCCCccEEEEEeeceEEEEeEEEEeCCCCCE
Confidence 4433311 1123456788999999995 999999833321 1 1234579999999999999999999999998544
Q ss_pred EEeceeeEEEEeEEEECCCCCCCCCeeeecC------ccCEEEEeeEEe-cCCccEEEcCCceeEEEEeeEEcC------
Q 017991 206 AFTNCLRVVISNLEVIAPAESPNTDGIHISA------SRGVEVKNSIVG-TGDDCISIVGNSSLIRIRNFACGP------ 272 (362)
Q Consensus 206 ~~~~~~nv~i~n~~I~~~~~~~~~DGI~~~~------s~nv~I~n~~i~-~gdD~i~i~s~~~ni~i~n~~~~~------ 272 (362)
+|.++.. | ||+++++ |+||+|+||+|+ ++||||++++ ++||+|+||+|.+
T Consensus 161 -------------~I~np~~--N-DGid~DGi~fdi~S~NV~I~Nc~I~ntGDDcIAIks-SeNI~I~Nc~c~gphG~S~ 223 (772)
T 3gqn_A 161 -------------DITCGGL--D-YPYLGDGTTAPNPSENIWIENCEATGFGDDGITTHH-SQYINILNCYSHDPRLTAN 223 (772)
T ss_dssp -------------EEECSSS--S-CCCCCTTCCCSSCCEEEEEESCEEESCSSCSEEECS-CEEEEEESCEEECCSSSSS
T ss_pred -------------EEeCCCc--C-CcCCCcCcccccccceEEEEeeEEEecCcCeEEecC-CceEEEEeEEEECCCCCCC
Confidence 4555443 2 6777776 999999999995 5999999988 9999999999943
Q ss_pred CceeEEeecCCCCCcccEEeEEEEcEEEeCCceeEEEEeeCCCCceEEeEEEEe-EEEecC
Q 017991 273 GHGISIGSLGKSNSSVRIHDIMVYGALISNTQNGVRIKTWQGGSGSATNIQFLD-VLMKNV 332 (362)
Q Consensus 273 ~~gi~igs~g~~~~~~~v~ni~i~n~~i~~~~~gi~i~~~~g~~g~i~ni~~~n-i~~~~~ 332 (362)
++|++||+ ..+||+|+||++.++.+|++||++. +++.++||.|.| +.++++
T Consensus 224 ~~GIsIGs--------gs~NVtV~Nc~~~nT~nGIRIKt~~-~gg~v~NV~I~gnis~~dv 275 (772)
T 3gqn_A 224 CNGFEIDD--------GSRHVVLSNNRSKGCYGGIEIKAHG-DAPAAYNISINGHMSVEDV 275 (772)
T ss_dssp CCSEEECT--------TCEEEEEEEEEEESSSEEEEECCCT-TSCCCEEEEEEEEEEESCS
T ss_pred cccEEecC--------CcccEEEEceEEECCCcEEEEEEeC-CCCccccEEEECCEEeccC
Confidence 47899986 2399999999999999999999864 457899999985 766665
No 15
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=100.00 E-value=5.6e-37 Score=305.11 Aligned_cols=253 Identities=11% Similarity=0.195 Sum_probs=202.6
Q ss_pred eccccCCCCcchHHHHHHHHHHHcCC-------------------------CCCcEEEEcCCcEEEe---eeeeccCCCC
Q 017991 59 DFGAKGDGFNDDTEAFANAWKKACSF-------------------------PARTKIVFSAGYTFLI---HPIDISGPCK 110 (362)
Q Consensus 59 ~~Ga~~dg~~ddt~aiq~Ai~~a~~~-------------------------~gg~~v~~P~G~~Y~i---~~l~l~~~~~ 110 (362)
.|||++||.+|++.+|. ++..++.. .++++|+||+| +|++ ++|.| +
T Consensus 147 ~~~~~~dg~~~~~~~l~-ifa~p~~~~~~~P~~~~~~~~~~~~g~~~~~~~~ggg~v~vP~G-~yl~g~~G~i~l----~ 220 (549)
T 1x0c_A 147 LISLAPSGARQPENALL-IFASPFENSSTKPQPGSPNSIAPAPGRVLGLNTTSASTVVFNPG-VYYFTGHDHMVL----S 220 (549)
T ss_dssp EEEETTTTEEEESEEEE-EEEECCCCTTTSCCTTCSSEECCCSEECCCTTTCCCSEEEECSE-EEECCTTCCEEE----C
T ss_pred cccccccCcCCCcceEE-EEcCChhhccCCCCcCCCCceeeccccccccccCCCCEEEECCe-EEecCCceEEEe----c
Confidence 69999999999998776 33323222 45899999999 9997 58999 9
Q ss_pred CCce-EEEE-e-EEECCCCCCCcCCCCccccEEEe-ceeeEEEEeccEEecCCCeeeecccccCCCCCCCCCCeEEEE--
Q 017991 111 SRLT-LEIS-G-TIVAPKDPDVWKGLNRRRWLYFN-RVNHLTVQGGGTINGMGQEWWSRSCKINTTNPCRHAPTAITF-- 184 (362)
Q Consensus 111 s~v~-l~~~-G-~i~~~~~~~~~~~~~~~~~i~~~-~~~ni~I~G~G~idG~G~~~~~~~~~~~~~~~~~~~~~~i~~-- 184 (362)
++++ |+++ | .|+++ +.+. +++|++|.|.|+|||+|..||...... ....+..+|+++.|
T Consensus 221 s~~~~L~l~~GA~L~gs--------------~~~~~~~~nv~ItG~GtIDG~G~~ww~~~~~~-~~~~~~~rp~~i~~~~ 285 (549)
T 1x0c_A 221 SSVTWVYFAPGAYVKGA--------------VEFLSTASEVKASGHGVLSGEQYVWYADPDEG-YQKASGANNNGLRMWR 285 (549)
T ss_dssp TTCCEEEECTTEEEESC--------------EEECCCSSEEEEESSCEEECTTSCTTEEGGGT-TEECGGGCSCCCCSEE
T ss_pred CCCCeEecCCCCEEEEE--------------EEEecCceeEEEEeeEEEECCCceecccCccc-ccccccCCCceEEEee
Confidence 9999 9998 5 44431 3344 889999999999999999999632110 11112347777777
Q ss_pred ----EeecceEEEceEEeeCCCceeEEe-ce-ee--EEEEeEEEECCCCCCCCCeeeecCccCEEEEeeEEecCCccEEE
Q 017991 185 ----HKCKNLKVQNLRVVNSQQMHIAFT-NC-LR--VVISNLEVIAPAESPNTDGIHISASRGVEVKNSIVGTGDDCISI 256 (362)
Q Consensus 185 ----~~~~nv~I~~v~i~n~~~~~i~~~-~~-~n--v~i~n~~I~~~~~~~~~DGI~~~~s~nv~I~n~~i~~gdD~i~i 256 (362)
.+|+|++|+|++++|+|.|++++. .| ++ |+|+|+++.++. .+|+|||++. +||+|+||+|.++||||++
T Consensus 286 ~~~~~~c~nV~I~Giti~Nsp~w~i~i~~~~~~ni~V~I~n~~i~~~~-~~NTDGidi~--~nV~I~n~~i~~gDDcIaI 362 (549)
T 1x0c_A 286 GTLGNSSQTFVLNGVTVSAPPFNSMDWSGNSLDLITCRVDDYKQVGAF-YGQTDGLEMY--PGTILQDVFYHTDDDGLKM 362 (549)
T ss_dssp EECCSSCEEEEEESCEEECCSSCSEEEECSCGGGEEEEEEEEEEECCC-BTTCCCCBCC--TTCEEEEEEEEESSCCEEC
T ss_pred ccccCCceEEEEECcEEECCCceeEEeeccCCCCCeEEEEeeEeEcCC-CCCCCccccc--CCEEEEeeEEeCCCCEEEE
Confidence 999999999999999999999965 56 69 999999998753 3589999998 8999999999999999999
Q ss_pred cCCceeEEEEeeEEcC--Cce-eEEeecCCCCCcccEEeEEEEcEEEeCCce------eEEEEe---e--C------CCC
Q 017991 257 VGNSSLIRIRNFACGP--GHG-ISIGSLGKSNSSVRIHDIMVYGALISNTQN------GVRIKT---W--Q------GGS 316 (362)
Q Consensus 257 ~s~~~ni~i~n~~~~~--~~g-i~igs~g~~~~~~~v~ni~i~n~~i~~~~~------gi~i~~---~--~------g~~ 316 (362)
++ +||+|+||+|+. +|+ +++|+ ..+.++||+|+||+|.++.+ |..|++ + . +..
T Consensus 363 ks--~NI~I~n~~~~~~~g~~~IsiGs-----~~~~V~NV~v~n~~i~~s~~~k~~~~g~iI~~~~~~~~g~~~~~~d~~ 435 (549)
T 1x0c_A 363 YY--SNVTARNIVMWKESVAPVVEFGW-----TPRNTENVLFDNVDVIHQAYANAGNNPGIFGAVNNYLYAPDGLSSNHS 435 (549)
T ss_dssp CS--SSEEEEEEEEEECSSSCSEECCB-----SCCCEEEEEEEEEEEEECCCCSGGGCCCSEEECCBTTTCTTSCCSCCC
T ss_pred CC--CCEEEEeeEEEcCCCCceEEECC-----CCCcEEEEEEEeeEEECccccccccceEEEecccccccCccccCcCCC
Confidence 99 999999999975 456 99998 25789999999999998763 555776 2 1 126
Q ss_pred ceEEeEEEEeEEEecCC-ccEEEEeee
Q 017991 317 GSATNIQFLDVLMKNVS-NPIIIDQYY 342 (362)
Q Consensus 317 g~i~ni~~~ni~~~~~~-~~i~i~~~y 342 (362)
|.|+||+|+||+|+++. .++.+.+.+
T Consensus 436 G~i~nI~f~NI~i~nv~~~g~~~~~~~ 462 (549)
T 1x0c_A 436 TGNSNMTVRNITWSNFRAEGSSSALFR 462 (549)
T ss_dssp CBEEEEEEEEEEEEEEEEEEEECCSEE
T ss_pred ceEccEEEEeEEEEeEEEeceEEeeec
Confidence 79999999999999997 676655443
No 16
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=100.00 E-value=5.4e-34 Score=283.45 Aligned_cols=219 Identities=14% Similarity=0.166 Sum_probs=179.2
Q ss_pred CCCcEEEEcCCcEEEe-------------eeeeccCCCCCCce-EEEE-eEEECCCCCCCcCCCCccccEEEeceeeEEE
Q 017991 85 PARTKIVFSAGYTFLI-------------HPIDISGPCKSRLT-LEIS-GTIVAPKDPDVWKGLNRRRWLYFNRVNHLTV 149 (362)
Q Consensus 85 ~gg~~v~~P~G~~Y~i-------------~~l~l~~~~~s~v~-l~~~-G~i~~~~~~~~~~~~~~~~~i~~~~~~ni~I 149 (362)
.++++|+||+| +|++ ++|.| +|+++ |+++ |..+. .++.+.+++|++|
T Consensus 229 ~ggg~v~vP~G-~yl~~~~~~~gpc~~g~G~i~l----kSnvt~L~L~~GA~l~-------------g~i~~~~~~nv~I 290 (574)
T 1ogo_X 229 GAKSILYFPPG-VYWMNQDQSGNSGKLGSNHIRL----NSNTYWVYLAPGAYVK-------------GAIEYFTKQNFYA 290 (574)
T ss_dssp CSSSEEEECSE-EEEECBCTTCCBSCSSSCCEEC----CTTCCEEEECTTEEEE-------------SCEEECCSSCEEE
T ss_pred CCCCEEEECCc-EEEEeccccCCcccccceEEEe----cCCCceEEecCCcEEE-------------ccEEEeCceeEEE
Confidence 45799999999 9999 46788 88888 8887 43322 2378899999999
Q ss_pred EeccEEecCCCeeeecccccCCCCCCCCCCeEEEEE------eecceEEEceEEeeCCCceeEEeceeeE--EEEeEEEE
Q 017991 150 QGGGTINGMGQEWWSRSCKINTTNPCRHAPTAITFH------KCKNLKVQNLRVVNSQQMHIAFTNCLRV--VISNLEVI 221 (362)
Q Consensus 150 ~G~G~idG~G~~~~~~~~~~~~~~~~~~~~~~i~~~------~~~nv~I~~v~i~n~~~~~i~~~~~~nv--~i~n~~I~ 221 (362)
+|.|+|||+|..||...... ...+..||+++.|. +|+||+|+|++++|++.|++++..|++| +|+|+++.
T Consensus 291 tG~GtIDG~G~~ww~~~~~~--~~~~~~rp~~i~~~~~~~~~~c~NV~I~Giti~NSp~w~i~~~~c~nV~~~I~nv~i~ 368 (574)
T 1ogo_X 291 TGHGILSGENYVYQANAGDN--YIAVKSDSTSLRMWWHNNLGGGQTWYCVGPTINAPPFNTMDFNGNSGISSQISDYKQV 368 (574)
T ss_dssp ESSCEEECTTSCTTCBTTTT--TBSCCCTTTBCCSEEECSCCSSEEEEEESCEEECCSSCSEEECSSSCEEEEEEEEEEE
T ss_pred EeCEEEeCCCcccccccccc--cccccCCcceEEEEeccccCCceeEEEECeEEECCCCcEEeecCCCChhhEEEeeEee
Confidence 99999999999999742211 11223578888887 9999999999999999999999999999 99999998
Q ss_pred CCCCCCCCCeeeecCccCEEEEeeEEecCCccEEEcCCceeEEEEeeEEcC--Cce-eEEeecCCCCCcccEEeEEEEcE
Q 017991 222 APAESPNTDGIHISASRGVEVKNSIVGTGDDCISIVGNSSLIRIRNFACGP--GHG-ISIGSLGKSNSSVRIHDIMVYGA 298 (362)
Q Consensus 222 ~~~~~~~~DGI~~~~s~nv~I~n~~i~~gdD~i~i~s~~~ni~i~n~~~~~--~~g-i~igs~g~~~~~~~v~ni~i~n~ 298 (362)
++. ..++||||+. +||+|+||+|.++||||++++ +||+|+||+|.. +|+ +++|+ +.+.++||+|+||
T Consensus 369 ~~~-~~nTDGIDi~--~NV~I~nc~I~~gDDcIaIks--~NI~I~nc~i~~g~g~g~IsIGS-----~~g~V~NV~v~N~ 438 (574)
T 1ogo_X 369 GAF-FFQTDGPEIY--PNSVVHDVFWHVNDDAIKIYY--SGASVSRATIWKCHNDPIIQMGW-----TSRDISGVTIDTL 438 (574)
T ss_dssp CCC-STTCCCCBCC--TTCEEEEEEEEESSCSEECCS--TTCEEEEEEEEECSSSCSEECCS-----SCCCEEEEEEEEE
T ss_pred CCC-CCCCccCccc--CCEEEEeeEEECCCCEEEECC--ccEEEEeEEEECCCCCceEEEcC-----CCCcEEEEEEEeE
Confidence 743 2359999998 899999999999999999998 999999999875 456 99998 3578999999999
Q ss_pred EEeCCce--------eEEE----------EeeCCCCceEEeEEEEeEEEecCCccE
Q 017991 299 LISNTQN--------GVRI----------KTWQGGSGSATNIQFLDVLMKNVSNPI 336 (362)
Q Consensus 299 ~i~~~~~--------gi~i----------~~~~g~~g~i~ni~~~ni~~~~~~~~i 336 (362)
+|.++.. +..+ +... +.| | ||+|+||+|+++++|+
T Consensus 439 ~i~~~~~~~~~~~~~g~iiGs~~~y~~~~~~~~-g~g-V-NI~f~NI~~~~v~~~i 491 (574)
T 1ogo_X 439 NVIHTRYIKSETVVPSAIIGASPFYASGMSPDS-RKS-I-SMTVSNVVCEGLCPSL 491 (574)
T ss_dssp EEEECCCSSCCTTTTCEEEEECCCSSSSCCCEE-EEE-E-EEEEEEEEECSSBCEE
T ss_pred EEECCcccceeccccceeeccccccccccccCC-Cce-E-EEEEEeEEEEceeEee
Confidence 9988754 2222 1111 234 8 9999999999998875
No 17
>2vbk_A Tailspike-protein; viral adhesion protein, viral protein, hydrolase, endorhamnosidase, right-handed parallel beta-helix; 1.25A {Enterobacteria phage SF6} PDB: 2vbe_A 2vbm_A*
Probab=99.98 E-value=1.1e-32 Score=257.48 Aligned_cols=213 Identities=18% Similarity=0.222 Sum_probs=165.6
Q ss_pred CeeEEeeeccccCCCCcchHHHHHHHHHHHcCCCCCcEEEEcCCc---EEEe-eeeeccCCCCCCceEEEEe--EEECCC
Q 017991 52 KRVIFVGDFGAKGDGFNDDTEAFANAWKKACSFPARTKIVFSAGY---TFLI-HPIDISGPCKSRLTLEISG--TIVAPK 125 (362)
Q Consensus 52 ~~~~~v~~~Ga~~dg~~ddt~aiq~Ai~~a~~~~gg~~v~~P~G~---~Y~i-~~l~l~~~~~s~v~l~~~G--~i~~~~ 125 (362)
+..++|++|||+|||++|||+|||+||++|++.+++++|+||+|+ +|++ ++|.| +++++|.+++ ++.++.
T Consensus 49 s~~~NVkDFGAkGDGvTDDTaAIQkAIdaA~a~~GGGtVyVPaG~~~~tYlvt~tI~L----kSnV~L~Ge~~AtIl~s~ 124 (514)
T 2vbk_A 49 KEAISILDFGVIDDGVTDNYQAIQNAIDAVASLPSGGELFIPASNQAVGYIVGSTLLI----PGGVNIRGVGKASQLRAK 124 (514)
T ss_dssp TTCCBGGGGCCCCSSSSCCHHHHHHHHHHHHTSTTCEEEECCCCSSTTCEEESSCEEE----CTTEEEECCSTTSEEEEC
T ss_pred CcEEEeeccCcCCCCCcccHHHHHHHHHHHhhcCCCeEEEECCCCcceeEEECCeEEe----cCCeEEEEecCceEeecc
Confidence 468999999999999999999999999988877678999999995 6888 58999 8999999884 443321
Q ss_pred CC-CC-cCCCCccccEEEeceeeEEEEeccEEecCCCeeeecccccCCCCCCCCCCeEEEEEeecceEEEceEE--eeCC
Q 017991 126 DP-DV-WKGLNRRRWLYFNRVNHLTVQGGGTINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKVQNLRV--VNSQ 201 (362)
Q Consensus 126 ~~-~~-~~~~~~~~~i~~~~~~ni~I~G~G~idG~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~nv~I~~v~i--~n~~ 201 (362)
.. .. +......+++.+.+++|++|+|.|+|||++..|+.... ..|+ .....+++|.|++++. .+++
T Consensus 125 ~~I~GtIia~~y~s~I~~~~VeNIaITG~GTIDG~g~n~t~e~~--------~~Rq--~~~~~fdnV~Vn~Vt~~v~~Sg 194 (514)
T 2vbk_A 125 SGLTGSVLRLSYDSDTIGRYLRNIRVTGNNTCNGIDTNITAEDS--------VIRQ--VYGWVFDNVMVNEVETAYLMQG 194 (514)
T ss_dssp TTCCSEEEEECCCSCCSCEEEESCEEECCSSSEEEEESCCTTCS--------SCCC--EESEEEESCEEEEEEEEEEEES
T ss_pred ccccccEEeccCCccccccCceEEEEECCCeEeCCCCCccccce--------eeec--cceEEeeeEEEEeEEEeEeccC
Confidence 11 00 00011235677888999999999999998755432100 1111 2222367999999965 4788
Q ss_pred CceeEEeceeeEEEE-eEEEECCCCCCCCCeeeecCccCEEEEeeEEecCCccEEEcCC-----------ceeEEEEeeE
Q 017991 202 QMHIAFTNCLRVVIS-NLEVIAPAESPNTDGIHISASRGVEVKNSIVGTGDDCISIVGN-----------SSLIRIRNFA 269 (362)
Q Consensus 202 ~~~i~~~~~~nv~i~-n~~I~~~~~~~~~DGI~~~~s~nv~I~n~~i~~gdD~i~i~s~-----------~~ni~i~n~~ 269 (362)
.|++++..|++++++ ++++.. +|+||+|.+|+|..||||+++++| ++||.
T Consensus 195 ~WTIhPi~Cqnvt~r~gL~f~e-------------SCrNV~IsnC~FsVGDdciaiksGk~~~~~~~~~~se~~~----- 256 (514)
T 2vbk_A 195 LWHSKFIACQAGTCRVGLHFLG-------------QCVSVSVSSCHFSRGNYSADESFGIRIQPQTYAWSSEAVR----- 256 (514)
T ss_dssp EEEEEEESCEEEEEEEEEEEES-------------CCEEEEEESCEEECTTSCCTTCEEEEEECBCCTTTSSCBC-----
T ss_pred cEEEeEeccCceecccCccccC-------------CCCeEEEeccEEecCcceeeeecCceecccccCCcchhcc-----
Confidence 999999999999988 666543 799999999999999999999996 45554
Q ss_pred EcCCce-eEEeecCCCC-CcccEEe-EEEEcEEEeCCc
Q 017991 270 CGPGHG-ISIGSLGKSN-SSVRIHD-IMVYGALISNTQ 304 (362)
Q Consensus 270 ~~~~~g-i~igs~g~~~-~~~~v~n-i~i~n~~i~~~~ 304 (362)
|| +.+|| | +..+++| |++++|.+.+++
T Consensus 257 ----hgav~igS----E~m~~Gvk~~v~v~~Clf~~td 286 (514)
T 2vbk_A 257 ----SEAIILDS----ETMCIGFKNAVYVHDCLDLHME 286 (514)
T ss_dssp ----CEEEEEES----SEEEESCSEEEEESCCEEEEEE
T ss_pred ----cccEEECc----hhhcccccccEEEEeeeccCCc
Confidence 75 99999 6 7889999 999999998763
No 18
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=99.97 E-value=4.9e-30 Score=246.74 Aligned_cols=253 Identities=20% Similarity=0.240 Sum_probs=178.5
Q ss_pred eEEeeeccccCCCCcchHHHHHHHHHHHcCCCCCcEEEEcCCcEEEee--------eeeccCCCCCCceEEEEe---E-E
Q 017991 54 VIFVGDFGAKGDGFNDDTEAFANAWKKACSFPARTKIVFSAGYTFLIH--------PIDISGPCKSRLTLEISG---T-I 121 (362)
Q Consensus 54 ~~~v~~~Ga~~dg~~ddt~aiq~Ai~~a~~~~gg~~v~~P~G~~Y~i~--------~l~l~~~~~s~v~l~~~G---~-i 121 (362)
+++|++|||+|||++|||+|||+||++|+++ ++++|+||+| +|++. +|.+ +++++|+++| + |
T Consensus 2 ~~~v~~~ga~~dg~~ddt~aiq~Ai~~a~~~-gg~~v~~p~G-~y~~~~~~~~~~g~l~~----~~~v~l~g~g~~~t~l 75 (377)
T 2pyg_A 2 DYNVKDFGALGDGVSDDRASIQAAIDAAYAA-GGGTVYLPAG-EYRVSAAGEPGDGCLML----KDGVYLAGAGMGETVI 75 (377)
T ss_dssp CEEGGGGTCCCEEEEECHHHHHHHHHHHHHT-TSEEEEECSE-EEEECCCSSGGGCSEEC----CTTEEEEESSBTTEEE
T ss_pred EeeeeecCCCCCCCcchHHHHHHHHHHHHhc-CCCEEEECCe-EEEEcccccCCcccEEe----cCCeEEEEcCCCCcEE
Confidence 6899999999999999999999999977654 5799999999 99994 7888 8999999985 3 4
Q ss_pred ECCCCCCCcCC----CCccccEEEeceeeEEEEec-----cEEecCCCeeeecccccCCCCCCCCCCeEEEEEeecceEE
Q 017991 122 VAPKDPDVWKG----LNRRRWLYFNRVNHLTVQGG-----GTINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKV 192 (362)
Q Consensus 122 ~~~~~~~~~~~----~~~~~~i~~~~~~ni~I~G~-----G~idG~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~nv~I 192 (362)
++......+.. .....-..+.++++++|+|. |++|| ||...++ . .+..|++++|
T Consensus 76 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~I~G~~~~~~G~idG----w~~~~~~--------~-----~~~~~~nv~I 138 (377)
T 2pyg_A 76 KLIDGSDQKITGMVRSAYGEETSNFGMRDLTLDGNRDNTSGKVDG----WFNGYIP--------G-----GDGADRDVTI 138 (377)
T ss_dssp EECTTCBSCEEEEEECCTTSCCEEEEEEEEEEECCGGGCBSCEEE----EEECSCT--------T-----SSCCEEEEEE
T ss_pred EecCCCccCccceEeccCCCcceEEEEEEEEEECCCccCCccccc----eecccCc--------c-----ccccccceEE
Confidence 44443322210 00000113457899999997 78887 8874221 0 1246999999
Q ss_pred EceEEeeCCCceeEEecee-eEEEEeEEEECCC-------------------CCCCCCeeeecC-ccCEEEEeeEEecCC
Q 017991 193 QNLRVVNSQQMHIAFTNCL-RVVISNLEVIAPA-------------------ESPNTDGIHISA-SRGVEVKNSIVGTGD 251 (362)
Q Consensus 193 ~~v~i~n~~~~~i~~~~~~-nv~i~n~~I~~~~-------------------~~~~~DGI~~~~-s~nv~I~n~~i~~gd 251 (362)
+++++++++.|++++..|. +++++|+.+.... ..++.|||++.. |++++|+++.+...+
T Consensus 139 ~~~~i~n~~~~gi~~~~~~~~~~i~n~~~~~~~~dGI~~~~s~~~~i~~N~~~~~~~~GI~~~~~s~~v~I~nN~i~~~~ 218 (377)
T 2pyg_A 139 ERVEVREMSGYGFDPHEQTINLTIRDSVAHDNGLDGFVADYLVDSVFENNVAYANDRHGFNVVTSTHDFVMTNNVAYGNG 218 (377)
T ss_dssp EEEEEECCSSCSEEECSSEEEEEEESCEEESCSSCSEEEESEEEEEEESCEEESCSSCSEEEETTCEEEEEESCEEESCS
T ss_pred EeEEEEecccceEEeecccCCeEEEeEEeecCCCCceeEeccCCcEEECcEEEccccCcEEEEeccCCeEEECCEEECcc
Confidence 9999999999999988765 6777777764310 013466666554 666666666666666
Q ss_pred ccEEEc-------CCceeEEEEeeEEcC--CceeEEeecCCCCCcccEEeEEEEcEEEeCC-ceeEEEEeeCCCCceEEe
Q 017991 252 DCISIV-------GNSSLIRIRNFACGP--GHGISIGSLGKSNSSVRIHDIMVYGALISNT-QNGVRIKTWQGGSGSATN 321 (362)
Q Consensus 252 D~i~i~-------s~~~ni~i~n~~~~~--~~gi~igs~g~~~~~~~v~ni~i~n~~i~~~-~~gi~i~~~~g~~g~i~n 321 (362)
+++.+. ..+++++|+++++++ .+|+.+. .+++++|+|+++.++ ..||+|+. +++
T Consensus 219 ~g~~~~~~g~~~~~~s~nv~i~~N~~~~n~~~Gi~~~---------~~~~v~i~~N~i~~~~~~GI~i~g-------~~~ 282 (377)
T 2pyg_A 219 SSGLVVQRGLEDLALPSNILIDGGAYYDNAREGVLLK---------MTSDITLQNADIHGNGSSGVRVYG-------AQD 282 (377)
T ss_dssp SCSEEEECCSSCCCCCEEEEEESCEEESCSSCSEEEE---------EEEEEEEESCEEESCSSCSEEEEE-------EEE
T ss_pred CceEEEeccccCCCCCccEEEECCEEEcCccCceEec---------cccCeEEECCEEECCCCceEEEec-------CCC
Confidence 666552 335666777666654 3455543 368899999999887 67899882 889
Q ss_pred EEEEeEEEecCCc----cEEEEeeeCCC
Q 017991 322 IQFLDVLMKNVSN----PIIIDQYYCDS 345 (362)
Q Consensus 322 i~~~ni~~~~~~~----~i~i~~~y~~~ 345 (362)
++|+|+++.++.. ++.+.+.|+..
T Consensus 283 ~~i~~N~i~~n~~~~~~~~v~~~~~~~~ 310 (377)
T 2pyg_A 283 VQILDNQIHDNAQAAAVPEVLLQSFDDT 310 (377)
T ss_dssp EEEESCEEESCCSSSSCCSEEEECEEET
T ss_pred cEEECcEEECCcccccccceEEEEecCC
Confidence 9999999998643 34455556543
No 19
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=99.91 E-value=1.9e-23 Score=209.35 Aligned_cols=246 Identities=18% Similarity=0.255 Sum_probs=165.6
Q ss_pred CCCeeEEeeeccccCCCCcchHHHHHHHHHHHcCCCC--------CcEEEEcCCcEEEe-eeeeccCCCCCCceEEEEe-
Q 017991 50 KSKRVIFVGDFGAKGDGFNDDTEAFANAWKKACSFPA--------RTKIVFSAGYTFLI-HPIDISGPCKSRLTLEISG- 119 (362)
Q Consensus 50 ~~~~~~~v~~~Ga~~dg~~ddt~aiq~Ai~~a~~~~g--------g~~v~~P~G~~Y~i-~~l~l~~~~~s~v~l~~~G- 119 (362)
.-+..++|++|||+|||++|||+|||+||+++.+.++ +++|+||+| +|++ ++|.+ ++++.|.+++
T Consensus 45 ~y~v~~nV~dfGA~GDG~tDDT~Aiq~Ai~~a~~~Gggc~~st~~~~~V~~P~G-tYlvs~tI~l----~~~t~L~G~~~ 119 (758)
T 3eqn_A 45 GYPVFRNVKNYGAKGDGNTDDTAAIQAAINAGGRCGQGCDSTTTQPALVYFPPG-TYKVSSPLVV----LYQTQLIGDAK 119 (758)
T ss_dssp TCCSEEEGGGGTCCCEEEEECHHHHHHHHHTTSCSCTTCCCCSSSCEEEEECSS-EEEESSCEEC----CTTEEEEECSS
T ss_pred CCeEEEEHHHcCcCCCCCchhHHHHHHHHHHhhhcccccccccccceEEEECCc-eEEEcccEEc----cCCeEEEecCC
Confidence 4567889999999999999999999999996433222 269999999 9998 58999 8999999985
Q ss_pred ---EEECCCCCCCcCCCCccccEEEeceeeEEEEeccEEecCCCeeeecccccCCCCCCCCCCeEEEEEeecceEEEceE
Q 017991 120 ---TIVAPKDPDVWKGLNRRRWLYFNRVNHLTVQGGGTINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKVQNLR 196 (362)
Q Consensus 120 ---~i~~~~~~~~~~~~~~~~~i~~~~~~ni~I~G~G~idG~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~nv~I~~v~ 196 (362)
+|++... |.+ .. .|.+ ...+++|..||... ...+..++|++|+ ++
T Consensus 120 ~~pvIka~~~---F~G---~~----------li~~-d~y~~~G~~w~~~~--------------~~F~r~irNlviD-~t 167 (758)
T 3eqn_A 120 NLPTLLAAPN---FSG---IA----------LIDA-DPYLAGGAQYYVNQ--------------NNFFRSVRNFVID-LR 167 (758)
T ss_dssp SCCEEEECTT---CCS---SC----------SEES-SCBCGGGCBSSCGG--------------GCCCEEEEEEEEE-CT
T ss_pred CCCeEecCCC---CCC---cc----------eeec-cccCCCCccccccc--------------cceeeeecceEEe-cc
Confidence 5555322 221 01 1333 33556777888632 2344567788888 66
Q ss_pred EeeCCCceeEEeceeeEEEEeEEEECCCCC-CCCCeeeecCccCEEEEeeEEecCCccEEEcCC---ceeEEEEeeE---
Q 017991 197 VVNSQQMHIAFTNCLRVVISNLEVIAPAES-PNTDGIHISASRGVEVKNSIVGTGDDCISIVGN---SSLIRIRNFA--- 269 (362)
Q Consensus 197 i~n~~~~~i~~~~~~nv~i~n~~I~~~~~~-~~~DGI~~~~s~nv~I~n~~i~~gdD~i~i~s~---~~ni~i~n~~--- 269 (362)
..++...+|++..|++..|+||.|..+..+ ..++||++..+..+.|+|++|..|+-++.+... .+|++|.||.
T Consensus 168 ~~~~~~~gIhw~vaQatsL~Nv~i~m~~~sg~~~~GI~~e~GSgg~i~Dl~f~GG~~G~~~gnQQfT~rnltF~~~~taI 247 (758)
T 3eqn_A 168 QVSGSATGIHWQVSQATSLINIVFQMSTAAGNQHQGIFMENGSGGFLGDLVFNGGNIGATFGNQQFTVRNLTFNNANTAI 247 (758)
T ss_dssp TCSSCEEEEECCCCSSEEEEEEEEECCCSTTCCEEEEEECSCCCCEEEEEEEESCSEEEEEECSCCEEEEEEEESCSEEE
T ss_pred ccCCCceEEEEEecCceEEEEEEEEecCCCCCcceeEEecCCCceEEEeeEEeCCceEEEcCCcceEEeccEEeChHHHH
Confidence 666667899999999999999999997665 359999999888999999999999999988663 3455555442
Q ss_pred --------------EcCC-ceeEEeecCCC-CCcccEEeEEEEcEEEeCCceeEEEEeeCCCCceEEeEEEEeEEEecCC
Q 017991 270 --------------CGPG-HGISIGSLGKS-NSSVRIHDIMVYGALISNTQNGVRIKTWQGGSGSATNIQFLDVLMKNVS 333 (362)
Q Consensus 270 --------------~~~~-~gi~igs~g~~-~~~~~v~ni~i~n~~i~~~~~gi~i~~~~g~~g~i~ni~~~ni~~~~~~ 333 (362)
+.++ -||.|.+-+.. .....+-.+++.|.++.++..+|........ ..-..+.++|+.+.++.
T Consensus 248 ~~~w~wgwt~~~~~i~nc~vGi~~~~g~~~~~~~q~vGsv~l~Ds~~~n~~~~i~t~~~~~~-~~~~slvleNv~~~nv~ 326 (758)
T 3eqn_A 248 NAIWNWGWTFQRITINNCQVGFDLTQGGTSNTGAQGVGAEAIIDAVVTNTQTFVRWSGASSG-HLQGSLVLNNIQLTNVP 326 (758)
T ss_dssp EEEEBSCEEEEEEEEESCSEEEEECCCCSSTTSCCCBCEEEEEEEEEESCSEEEEESSCCCS-SCSSEEEEEEEEEEEEE
T ss_pred hhhcCceEEEEEeEEECCCccEEEcCCCCCcccCcceeeEEEEEeeEEcccceEEeccCCCC-CCcceEEEEeEEeeCCC
Confidence 1111 13333321100 0123456777777777777544443211111 11124667777766653
No 20
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=99.87 E-value=2.3e-21 Score=188.74 Aligned_cols=193 Identities=14% Similarity=0.177 Sum_probs=156.4
Q ss_pred ccEEEeceeeEEEEeccEEecCCCeeeecccccCCCCCCCCCCeEEEEEeecceEEEceEEeeC--CCceeEEeceeeEE
Q 017991 137 RWLYFNRVNHLTVQGGGTINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKVQNLRVVNS--QQMHIAFTNCLRVV 214 (362)
Q Consensus 137 ~~i~~~~~~ni~I~G~G~idG~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~nv~I~~v~i~n~--~~~~i~~~~~~nv~ 214 (362)
.++.+.+++|++|+|....+.. .| .+++..|+|++|+++++.++ ...+|++..|+||+
T Consensus 191 ~~i~~~~~~nv~i~giti~nsp---~~-----------------~i~~~~~~nv~i~~v~I~~~~~NtDGidi~~s~nV~ 250 (448)
T 3jur_A 191 SFVQFYRCRNVLVEGVKIINSP---MW-----------------CIHPVLSENVIIRNIEISSTGPNNDGIDPESCKYML 250 (448)
T ss_dssp CSEEEESCEEEEEESCEEESCS---SC-----------------SEEEESCEEEEEESCEEEECSTTCCSBCCBSCEEEE
T ss_pred eEEEEEcccceEEEeeEEEeCC---Cc-----------------eEeeeccCCEEEEeEEEeeccCCCccccccCCcCEE
Confidence 5799999999999995554432 34 38999999999999999985 35579999999999
Q ss_pred EEeEEEECCCCCCCCCeeeecC------------ccCEEEEeeEE--ecCCccEEEcCC----ceeEEEEeeEEcCC-ce
Q 017991 215 ISNLEVIAPAESPNTDGIHISA------------SRGVEVKNSIV--GTGDDCISIVGN----SSLIRIRNFACGPG-HG 275 (362)
Q Consensus 215 i~n~~I~~~~~~~~~DGI~~~~------------s~nv~I~n~~i--~~gdD~i~i~s~----~~ni~i~n~~~~~~-~g 275 (362)
|+||+|.+ ..|+|.+.+ |+||+|+||++ ..+++|+++++. .+||+|+||++.++ +|
T Consensus 251 I~n~~i~~-----gDDcIaiksg~~~dg~~~~~ps~nI~I~n~~~~~~~gh~gisiGS~~~~~v~nV~v~n~~~~~t~~G 325 (448)
T 3jur_A 251 IEKCRFDT-----GDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGGVRNVVARNNVYMNVERA 325 (448)
T ss_dssp EESCEEEE-----SSEEEEEBCCCHHHHHHHCCCEEEEEEESCEEECSSCSEEEEECSSCTTCEEEEEEESCEEESCSEE
T ss_pred EEeeEEEe-----CCCcEEeccCccccccccCCCceeEEEEEeEEecCCCcceEEECCcccCcEEEEEEEEEEEecccce
Confidence 99999998 567777653 78999999999 556679999874 59999999999876 79
Q ss_pred eEEeecCCCCCcccEEeEEEEcEEEeCCceeE-EEEeeCC-----CCceEEeEEEEeEEEecCCccEEEEeeeCCCCCCC
Q 017991 276 ISIGSLGKSNSSVRIHDIMVYGALISNTQNGV-RIKTWQG-----GSGSATNIQFLDVLMKNVSNPIIIDQYYCDSPVPC 349 (362)
Q Consensus 276 i~igs~g~~~~~~~v~ni~i~n~~i~~~~~gi-~i~~~~g-----~~g~i~ni~~~ni~~~~~~~~i~i~~~y~~~~~~c 349 (362)
+.|++... ..+.++||+|+|++|.+..+++ .|+.... ..+.|+||+|+||+.++.+.++.|. |....||
T Consensus 326 irIKt~~g--~gG~v~nI~f~ni~m~~v~~~~i~I~~~Y~~~~~~~~~~i~nI~~~NI~~t~~~~~i~i~---g~~~~p~ 400 (448)
T 3jur_A 326 LRLKTNSR--RGGYMENIFFIDNVAVNVSEEVIRINLRYDNEEGEYLPVVRSVFVKNLKATGGKYAVRIE---GLENDYV 400 (448)
T ss_dssp EEEECCTT--TCSEEEEEEEESCEEEEESSEEEEEESCGGGCCCSCCCEEEEEEEESCEEEECSEEEEEE---CBTTBCE
T ss_pred EEEEEEcC--CCceEeeEEEEEEEEECCccccEEEEeeccCCCCCCCceEEEEEEEeEEEEecceEEEEE---eCCCCCE
Confidence 99998532 3578999999999999998887 8876432 3468999999999999977788885 6666688
Q ss_pred CC-CCCceeee
Q 017991 350 AN-QVCNPYAT 359 (362)
Q Consensus 350 ~~-~~~~~~~~ 359 (362)
++ .-++|.++
T Consensus 401 ~~I~~~nv~i~ 411 (448)
T 3jur_A 401 KDILISDTIIE 411 (448)
T ss_dssp EEEEEEEEEEE
T ss_pred eeEEEEEEEEE
Confidence 76 34555443
No 21
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=99.86 E-value=2e-19 Score=172.33 Aligned_cols=210 Identities=15% Similarity=0.205 Sum_probs=165.3
Q ss_pred CCCceEEEEeEEECCCC-------CCCcCC----------CCccccEEEeceeeEEEEeccEEecCCCeeeecccccCCC
Q 017991 110 KSRLTLEISGTIVAPKD-------PDVWKG----------LNRRRWLYFNRVNHLTVQGGGTINGMGQEWWSRSCKINTT 172 (362)
Q Consensus 110 ~s~v~l~~~G~i~~~~~-------~~~~~~----------~~~~~~i~~~~~~ni~I~G~G~idG~G~~~~~~~~~~~~~ 172 (362)
.++++|.+.|+|..... ...|+. .....++.+.+++|++|+|.-..+.. .|
T Consensus 108 ~~ni~I~G~G~IdG~G~~~~~~~~~~ww~~~~~~~~~~~~~~rp~~i~~~~~~nv~I~~iti~nsp---~~--------- 175 (376)
T 1bhe_A 108 TTNSGIYGPGTIDGQGGVKLQDKKVSWWELAADAKVKKLKQNTPRLIQINKSKNFTLYNVSLINSP---NF--------- 175 (376)
T ss_dssp CBSCEEECSSEEECCTTSCCSSSSSCTTHHHHHHHHHTCEECCCCSEEEESCEEEEEEEEEEECCS---SC---------
T ss_pred CEeEEEEeCEEEECCCCcccCCCccccccccccccccCccCCCCeEEEEEcceEEEEEeEEEECCC---cE---------
Confidence 67888888889887543 223431 11345799999999999994443322 24
Q ss_pred CCCCCCCeEEEEEeecceEEEceEEeeC----CCceeEEeceeeEEEEeEEEECCCCCCCCCeeeec------CccCEEE
Q 017991 173 NPCRHAPTAITFHKCKNLKVQNLRVVNS----QQMHIAFTNCLRVVISNLEVIAPAESPNTDGIHIS------ASRGVEV 242 (362)
Q Consensus 173 ~~~~~~~~~i~~~~~~nv~I~~v~i~n~----~~~~i~~~~~~nv~i~n~~I~~~~~~~~~DGI~~~------~s~nv~I 242 (362)
.+.+..|+|++|++++|.++ ...+|++..|+||+|+|++|.+ ..|+|.+. .|+||+|
T Consensus 176 --------~i~~~~~~~v~i~~v~I~~~~~~~NtDGid~~~s~nV~I~n~~i~~-----gDDcIaiks~~~~~~s~nI~I 242 (376)
T 1bhe_A 176 --------HVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAYSNIAT-----GDDNVAIKAYKGRAETRNISI 242 (376)
T ss_dssp --------SEEEESCEEEEEEEEEEECCTTCSSCCSEEEESCEEEEEESCEEEC-----SSCSEEEEECTTSCCEEEEEE
T ss_pred --------EEEEeCCCcEEEEeEEEECCCCCCCCceEeecCCceEEEEeCEEec-----CCCeEEEcccCCCCCceEEEE
Confidence 38888999999999999985 2457999999999999999998 67999998 5999999
Q ss_pred EeeEEecCCccEEEcC---CceeEEEEeeEEcCC-ceeEEeecCCCCCcccEEeEEEEcEEEeCCceeEEEEeeCC----
Q 017991 243 KNSIVGTGDDCISIVG---NSSLIRIRNFACGPG-HGISIGSLGKSNSSVRIHDIMVYGALISNTQNGVRIKTWQG---- 314 (362)
Q Consensus 243 ~n~~i~~gdD~i~i~s---~~~ni~i~n~~~~~~-~gi~igs~g~~~~~~~v~ni~i~n~~i~~~~~gi~i~~~~g---- 314 (362)
+||++..+. ++++++ +.+||+|+||++.++ +|+.|.+.. ...+.++||+|+|++|.+..++|.|.....
T Consensus 243 ~n~~~~~gh-GisiGSe~~~v~nV~v~n~~~~~t~~GirIKt~~--g~~G~v~ni~f~ni~~~~v~~~i~i~~~y~~~~~ 319 (376)
T 1bhe_A 243 LHNDFGTGH-GMSIGSETMGVYNVTVDDLKMNGTTNGLRIKSDK--SAAGVVNGVRYSNVVMKNVAKPIVIDTVYEKKEG 319 (376)
T ss_dssp EEEEECSSS-CEEEEEEESSEEEEEEEEEEEESCSEEEEEECCT--TTCCEEEEEEEEEEEEESCSEEEEEETTSSCCCC
T ss_pred EeeEEEccc-cEEeccCCccEeeEEEEeeEEeCCCcEEEEEEec--CCCceEeeEEEEeEEEeCCCceEEEEeeccCCCC
Confidence 999999764 698875 579999999999876 589998842 245689999999999999999999875432
Q ss_pred -CCceEEeEEEEeEEEecCCccEEEEeeeCCCCCCCCC
Q 017991 315 -GSGSATNIQFLDVLMKNVSNPIIIDQYYCDSPVPCAN 351 (362)
Q Consensus 315 -~~g~i~ni~~~ni~~~~~~~~i~i~~~y~~~~~~c~~ 351 (362)
....++||+|+||+.+... ++.|. |..+.||.+
T Consensus 320 ~~~~~i~ni~~~ni~gt~~~-~~~l~---g~~~~~~~~ 353 (376)
T 1bhe_A 320 SNVPDWSDITFKDVTSETKG-VVVLN---GENAKKPIE 353 (376)
T ss_dssp CCCCEEEEEEEEEEEECSCC-EEEEE---CTTCSSCEE
T ss_pred CcCcEEEEEEEEEEEEEecc-eEEEE---eCCCCCeee
Confidence 1357999999999999754 56555 666667865
No 22
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=99.85 E-value=1.7e-19 Score=170.18 Aligned_cols=216 Identities=16% Similarity=0.235 Sum_probs=166.8
Q ss_pred CCCceEEEE--eEEECCCCCCCcCC------CCccccEEEeceeeEEEEeccEEecCCCeeeecccccCCCCCCCCCCeE
Q 017991 110 KSRLTLEIS--GTIVAPKDPDVWKG------LNRRRWLYFNRVNHLTVQGGGTINGMGQEWWSRSCKINTTNPCRHAPTA 181 (362)
Q Consensus 110 ~s~v~l~~~--G~i~~~~~~~~~~~------~~~~~~i~~~~~~ni~I~G~G~idG~G~~~~~~~~~~~~~~~~~~~~~~ 181 (362)
.++++|.+. |+|...- ...|.. ...+.++.+.+++|++|+|..+.+.. .| .
T Consensus 67 ~~nv~I~G~~gG~IdG~G-~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~giti~nsp---~~-----------------~ 125 (339)
T 2iq7_A 67 GTNININGASGHSIDCQG-SRWWDSKGSNGGKTKPKFFYAHSLKSSNIKGLNVLNTP---VQ-----------------A 125 (339)
T ss_dssp EESCEEEECTTCEEECCG-GGTCCSCGGGSSSCCCCCEEEEEEEEEEEECCEEECCS---SC-----------------C
T ss_pred cccEEEEcCCCCEEECCc-ccccccccccCCCCCCeEEEEeeeCcEEEEEEEEEeCC---cc-----------------e
Confidence 368888887 6887543 233432 11235789999999999995554432 23 3
Q ss_pred EEEEeecceEEEceEEeeCC--------CceeEEeceeeEEEEeEEEECCCCCCCCCeeeecCccCEEEEeeEEecCCcc
Q 017991 182 ITFHKCKNLKVQNLRVVNSQ--------QMHIAFTNCLRVVISNLEVIAPAESPNTDGIHISASRGVEVKNSIVGTGDDC 253 (362)
Q Consensus 182 i~~~~~~nv~I~~v~i~n~~--------~~~i~~~~~~nv~i~n~~I~~~~~~~~~DGI~~~~s~nv~I~n~~i~~gdD~ 253 (362)
+.+..|+|++|++++|.+++ ..++++..|+||+|+|++|.. ..|+|.+.+++||+|+||++..++ +
T Consensus 126 i~i~~~~nv~i~~~~I~~~~~d~~~~~ntDGid~~~s~nV~I~n~~i~~-----gDDciaiksg~nI~i~n~~~~~gh-G 199 (339)
T 2iq7_A 126 FSINSATTLGVYDVIIDNSAGDSAGGHNTDAFDVGSSTGVYISGANVKN-----QDDCLAINSGTNITFTGGTCSGGH-G 199 (339)
T ss_dssp EEEESCEEEEEESCEEECGGGGGTTCCSCCSEEEESCEEEEEESCEEEC-----SSCSEEESSEEEEEEESCEEESSC-C
T ss_pred EEEeccCCEEEEEEEEECCccccccCCCCCcEEEcCcceEEEEecEEec-----CCCEEEEcCCccEEEEeEEEECCc-e
Confidence 89999999999999999863 346999999999999999987 679999999999999999999886 6
Q ss_pred EEEcC-------CceeEEEEeeEEcCC-ceeEEeecCCCCCcccEEeEEEEcEEEeCCce-eEEEEeeC---------CC
Q 017991 254 ISIVG-------NSSLIRIRNFACGPG-HGISIGSLGKSNSSVRIHDIMVYGALISNTQN-GVRIKTWQ---------GG 315 (362)
Q Consensus 254 i~i~s-------~~~ni~i~n~~~~~~-~gi~igs~g~~~~~~~v~ni~i~n~~i~~~~~-gi~i~~~~---------g~ 315 (362)
+++++ +.+||+|+||++.++ +|+.|.+.. ...+.++||+|+|++|.+... +|.|.... ..
T Consensus 200 isiGSlg~~~~~~v~nV~v~n~~~~~~~~girIkt~~--g~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~~~~~~p~~ 277 (339)
T 2iq7_A 200 LSIGSVGGRSDNTVKTVTISNSKIVNSDNGVRIKTVS--GATGSVSGVTYSGITLSNIAKYGIVIEQDYENGSPTGTPTN 277 (339)
T ss_dssp EEEEEESSSSCCEEEEEEEEEEEEESCSEEEEEEEET--TCCCEEEEEEEEEEEEEEESSEEEEEEEEEETTEECSCCCS
T ss_pred EEECcCCcccCCCEEEEEEEeeEEECCCcEEEEEEeC--CCCeEEEEEEEEeEEccCcccccEEEEeecCCCCCCCCCCC
Confidence 99976 269999999999875 689998853 235689999999999999765 98887542 12
Q ss_pred CceEEeEEEEeEEEecCC--ccEEEEeeeCCCCCCCCC-CCCceee
Q 017991 316 SGSATNIQFLDVLMKNVS--NPIIIDQYYCDSPVPCAN-QVCNPYA 358 (362)
Q Consensus 316 ~g~i~ni~~~ni~~~~~~--~~i~i~~~y~~~~~~c~~-~~~~~~~ 358 (362)
...|+||+|+||+.+... .++.|. |. ..||++ .-++|.+
T Consensus 278 ~~~i~ni~~~ni~gt~~~~~~~~~i~---c~-~~~c~ni~~~nv~i 319 (339)
T 2iq7_A 278 GVPITGLTLSKITGSVASSGTNVYIL---CA-SGACSNWKWSGVSV 319 (339)
T ss_dssp SSCEEEEEEEEEEEEECTTSEEEEEE---CC-TTCEEEEEEEEEEE
T ss_pred CceEEEEEEEeEEEEeCCCCEEEEEE---eC-CCcEecEEEEeEEE
Confidence 358999999999999875 466664 43 557766 3444443
No 23
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=99.83 E-value=4.9e-19 Score=167.05 Aligned_cols=216 Identities=15% Similarity=0.219 Sum_probs=166.7
Q ss_pred CCCceEEEE--eEEECCCCCCCcCC------CCccccEEEeceeeEEEEeccEEecCCCeeeecccccCCCCCCCCCCeE
Q 017991 110 KSRLTLEIS--GTIVAPKDPDVWKG------LNRRRWLYFNRVNHLTVQGGGTINGMGQEWWSRSCKINTTNPCRHAPTA 181 (362)
Q Consensus 110 ~s~v~l~~~--G~i~~~~~~~~~~~------~~~~~~i~~~~~~ni~I~G~G~idG~G~~~~~~~~~~~~~~~~~~~~~~ 181 (362)
.++++|.+. |+|...- ...|.. ...+.++.+.+++|++|+|....+.. .| .
T Consensus 71 ~~nv~I~G~~gG~IdG~G-~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~~i~i~nsp---~~-----------------~ 129 (339)
T 1ia5_A 71 GSDLTITGASGHSINGDG-SRWWDGEGGNGGKTKPKFFAAHSLTNSVISGLKIVNSP---VQ-----------------V 129 (339)
T ss_dssp EESCEEEECTTCEEECCG-GGTCSSCTTTSSSCCCCCEEEEEEEEEEEESCEEECCS---SC-----------------C
T ss_pred cCcEEEEcCCCeEEeCCC-CccccccccCCCCCCCeEEEEeecCcEEEEEEEEEcCC---cc-----------------e
Confidence 368888886 5777543 233432 11345789999999999995444332 23 3
Q ss_pred EEEEeecceEEEceEEeeCC--------CceeEEeceeeEEEEeEEEECCCCCCCCCeeeecCccCEEEEeeEEecCCcc
Q 017991 182 ITFHKCKNLKVQNLRVVNSQ--------QMHIAFTNCLRVVISNLEVIAPAESPNTDGIHISASRGVEVKNSIVGTGDDC 253 (362)
Q Consensus 182 i~~~~~~nv~I~~v~i~n~~--------~~~i~~~~~~nv~i~n~~I~~~~~~~~~DGI~~~~s~nv~I~n~~i~~gdD~ 253 (362)
+.+..|+|++|+++++.++. ..+|++..|+||+|+|++|.. ..|+|.+.+++||+|+||++..++ +
T Consensus 130 i~i~~~~nv~i~~~~I~~~~~d~~~~~ntDGid~~~s~nV~I~n~~i~~-----gDDcIaiksg~nI~i~n~~~~~gh-G 203 (339)
T 1ia5_A 130 FSVAGSDYLTLKDITIDNSDGDDNGGHNTDAFDIGTSTYVTISGATVYN-----QDDCVAVNSGENIYFSGGYCSGGH-G 203 (339)
T ss_dssp EEEESCEEEEEESCEEECGGGTTTTCCSCCSEEEESCEEEEEESCEEEC-----SSCSEEESSEEEEEEESCEEESSS-C
T ss_pred EEEecccCeEEeeEEEECCccccccCCCCCcEEecCCceEEEEeeEEEc-----CCCeEEEeCCeEEEEEeEEEECCc-e
Confidence 89999999999999999752 446999999999999999997 679999999999999999999876 6
Q ss_pred EEEcC-------CceeEEEEeeEEcCC-ceeEEeecCCCCCcccEEeEEEEcEEEeCCce-eEEEEeeCC-------CCc
Q 017991 254 ISIVG-------NSSLIRIRNFACGPG-HGISIGSLGKSNSSVRIHDIMVYGALISNTQN-GVRIKTWQG-------GSG 317 (362)
Q Consensus 254 i~i~s-------~~~ni~i~n~~~~~~-~gi~igs~g~~~~~~~v~ni~i~n~~i~~~~~-gi~i~~~~g-------~~g 317 (362)
+++++ +.+||+|+||++.+. +|+.|.+.. ...+.++||+|+|++|.+... +|.|....+ ...
T Consensus 204 isiGS~g~~~~~~v~nV~v~n~~~~~t~~girIKt~~--g~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~~~~p~~~~ 281 (339)
T 1ia5_A 204 LSIGSVGGRSDNTVKNVTFVDSTIINSDNGVRIKTNI--DTTGSVSDVTYKDITLTSIAKYGIVVQQNYGDTSSTPTTGV 281 (339)
T ss_dssp EEEEEECSSSCCEEEEEEEEEEEEESCSEEEEEEEET--TCCCEEEEEEEEEEEEEEESSEEEEEEEEETCTTSCCCSSS
T ss_pred EEECcCCcccCCCEEEEEEEeeEEECCCcEEEEEEeC--CCCcEEEeeEEEEEEEECcccccEEEEccCCCCCCCCcCCc
Confidence 99976 269999999999876 589998853 235689999999999999775 998876421 235
Q ss_pred eEEeEEEEeEEEecCC--ccEEEEeeeCCCCCCCCC-CCCceee
Q 017991 318 SATNIQFLDVLMKNVS--NPIIIDQYYCDSPVPCAN-QVCNPYA 358 (362)
Q Consensus 318 ~i~ni~~~ni~~~~~~--~~i~i~~~y~~~~~~c~~-~~~~~~~ 358 (362)
.|+||+|+||+.+... .|+.|. |. ..||++ .-++|.+
T Consensus 282 ~i~ni~~~ni~gt~~~~~~~v~i~---c~-~~~c~ni~~~nv~i 321 (339)
T 1ia5_A 282 PITDFVLDNVHGSVVSSGTNILIS---CG-SGSCSDWTWTDVSV 321 (339)
T ss_dssp CEEEEEEEEEEEEECTTSEEEEEE---CC-TTCEEEEEEEEEEE
T ss_pred eEEEEEEEeEEEEeCCCCEEEEEE---eC-CCCEecEEEEeEEE
Confidence 8999999999998875 577665 53 557876 3444444
No 24
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=99.82 E-value=1.4e-18 Score=163.69 Aligned_cols=215 Identities=17% Similarity=0.236 Sum_probs=165.5
Q ss_pred CCCceEEEE--eEEECCCCCCCcCC------CCccccEEEeceeeEEEEeccEEecCCCeeeecccccCCCCCCCCCCeE
Q 017991 110 KSRLTLEIS--GTIVAPKDPDVWKG------LNRRRWLYFNRVNHLTVQGGGTINGMGQEWWSRSCKINTTNPCRHAPTA 181 (362)
Q Consensus 110 ~s~v~l~~~--G~i~~~~~~~~~~~------~~~~~~i~~~~~~ni~I~G~G~idG~G~~~~~~~~~~~~~~~~~~~~~~ 181 (362)
.++++|.+. |+|...- ...|.. ...+.++.+.+++|++|+|....+.. .| .
T Consensus 67 ~~nv~I~G~~gG~IdG~G-~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~~i~i~nsp---~~-----------------~ 125 (336)
T 1nhc_A 67 GKDLTVTMADGAVIDGDG-SRWWDSKGTNGGKTKPKFMYIHDVEDSTFKGINIKNTP---VQ-----------------A 125 (336)
T ss_dssp EESCEEEECTTCEEECCG-GGTCCSCTTTSSSCCCCCEEEEEEEEEEEESCEEECCS---SC-----------------C
T ss_pred cCCEEEEcCCCeEEECCc-cccccccCcCCCCCCceEEEEeeeCcEEEEEEEEEeCC---cc-----------------E
Confidence 378888887 6887643 233432 11335789999999999995444322 23 3
Q ss_pred EEEEeecceEEEceEEeeCC--------CceeEEeceeeEEEEeEEEECCCCCCCCCeeeecCccCEEEEeeEEecCCcc
Q 017991 182 ITFHKCKNLKVQNLRVVNSQ--------QMHIAFTNCLRVVISNLEVIAPAESPNTDGIHISASRGVEVKNSIVGTGDDC 253 (362)
Q Consensus 182 i~~~~~~nv~I~~v~i~n~~--------~~~i~~~~~~nv~i~n~~I~~~~~~~~~DGI~~~~s~nv~I~n~~i~~gdD~ 253 (362)
+.+. |+|++|++++|.+++ ..+|++..|+||+|+|++|.. ..|+|.+.+++||+|+||++..++ +
T Consensus 126 i~i~-~~nv~i~~~~I~~~~~d~~~~~ntDGidi~~s~nV~I~n~~i~~-----gDDciaiksg~nI~i~n~~~~~gh-G 198 (336)
T 1nhc_A 126 ISVQ-ATNVHLNDFTIDNSDGDDNGGHNTDGFDISESTGVYISGATVKN-----QDDCIAINSGESISFTGGTCSGGH-G 198 (336)
T ss_dssp EEEE-EEEEEEESCEEECTTHHHHTCCSCCSEEECSCEEEEEESCEEES-----SSEEEEESSEEEEEEESCEEESSS-E
T ss_pred EEEE-eCCEEEEEEEEECCCcccccCCCCCcEEecCCCeEEEEeCEEEc-----CCCEEEEeCCeEEEEEeEEEECCc-C
Confidence 8899 999999999999863 447999999999999999998 689999999999999999999876 6
Q ss_pred EEEcC-------CceeEEEEeeEEcCC-ceeEEeecCCCCCcccEEeEEEEcEEEeCCce-eEEEEeeC---------CC
Q 017991 254 ISIVG-------NSSLIRIRNFACGPG-HGISIGSLGKSNSSVRIHDIMVYGALISNTQN-GVRIKTWQ---------GG 315 (362)
Q Consensus 254 i~i~s-------~~~ni~i~n~~~~~~-~gi~igs~g~~~~~~~v~ni~i~n~~i~~~~~-gi~i~~~~---------g~ 315 (362)
+++++ +.+||+|+||++.++ +|+.|.+.. ...+.++||+|+|++|.+... +|.|.... ..
T Consensus 199 isiGS~g~~~~~~v~nV~v~n~~~~~t~~girIkt~~--g~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~~~~~~p~~ 276 (336)
T 1nhc_A 199 LSIGSVGGRDDNTVKNVTISDSTVSNSANGVRIKTIY--KETGDVSEITYSNIQLSGITDYGIVIEQDYENGSPTGTPST 276 (336)
T ss_dssp EEEEEESSSSCCEEEEEEEEEEEEESCSEEEEEEEET--TCCCEEEEEEEEEEEEEEESSEEEEEEEEEETTEECSCCCS
T ss_pred ceEccCccccCCCEEEEEEEeeEEECCCcEEEEEEEC--CCCCEEeeeEEeeEEeeccccccEEEEeecCCCCCCCCCCC
Confidence 99976 269999999999875 589998852 235689999999999999865 98886532 11
Q ss_pred CceEEeEEEEeEEEecCC--ccEEEEeeeCCCCCCCCC-CCCceee
Q 017991 316 SGSATNIQFLDVLMKNVS--NPIIIDQYYCDSPVPCAN-QVCNPYA 358 (362)
Q Consensus 316 ~g~i~ni~~~ni~~~~~~--~~i~i~~~y~~~~~~c~~-~~~~~~~ 358 (362)
...|+||+|+||+.+... .++.|. |. ..||++ .-++|.+
T Consensus 277 ~~~i~~i~~~ni~gt~~~~~~~v~i~---c~-~~~c~ni~~~nv~i 318 (336)
T 1nhc_A 277 GIPITDVTVDGVTGTLEDDATQVYIL---CG-DGSCSDWTWSGVDL 318 (336)
T ss_dssp SSCEEEEEEEEEEEEECTTCEEEEEE---CC-TTCEEEEEEEEEEE
T ss_pred CceEEEEEEEeEEEEeCCCCEEEEEE---cC-CCcEecEEEEeEEE
Confidence 357999999999998875 467666 43 557776 3444444
No 25
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=99.82 E-value=1.9e-18 Score=163.53 Aligned_cols=216 Identities=15% Similarity=0.175 Sum_probs=163.6
Q ss_pred CCCceEEEE--eEEECCCCCCCcCCC-------CccccEEE-e-ceeeEEEEeccEEecCCCeeeecccccCCCCCCCCC
Q 017991 110 KSRLTLEIS--GTIVAPKDPDVWKGL-------NRRRWLYF-N-RVNHLTVQGGGTINGMGQEWWSRSCKINTTNPCRHA 178 (362)
Q Consensus 110 ~s~v~l~~~--G~i~~~~~~~~~~~~-------~~~~~i~~-~-~~~ni~I~G~G~idG~G~~~~~~~~~~~~~~~~~~~ 178 (362)
.++++|.++ |+|...- ...|+.. ..+.++.+ . .++|++|+|..+.+.. .|
T Consensus 68 ~~ni~I~G~~~G~IdG~G-~~ww~~~~~~~~~~~rP~~i~~~~~~~~nv~I~giti~nsp---~~--------------- 128 (349)
T 1hg8_A 68 GSNITITGASGHVIDGNG-QAYWDGKGSNSNSNQKPDHFIVVQKTTGNSKITNLNIQNWP---VH--------------- 128 (349)
T ss_dssp EESCEEEECTTCEEECCG-GGTCCSCTTCTTSCCCCSEEEEEEEEESSEEEESCEEECCS---SE---------------
T ss_pred CccEEEEecCCCEEcCCc-chhhhcccccCCCCCCCeEEEEeecCcCcEEEEEEEEEcCC---Cc---------------
Confidence 368888884 7887642 2334321 12236778 7 7779999995544332 24
Q ss_pred CeEEEEEeecceEEEceEEeeCC----------------CceeEEeceeeEEEEeEEEECCCCCCCCCeeeecCccCEEE
Q 017991 179 PTAITFHKCKNLKVQNLRVVNSQ----------------QMHIAFTNCLRVVISNLEVIAPAESPNTDGIHISASRGVEV 242 (362)
Q Consensus 179 ~~~i~~~~~~nv~I~~v~i~n~~----------------~~~i~~~~~~nv~i~n~~I~~~~~~~~~DGI~~~~s~nv~I 242 (362)
.+.+..|+|++|++++|.+++ ..+|++..|+||+|+|++|.+ ..|+|.+.+++||+|
T Consensus 129 --~i~i~~~~nv~i~~~~I~~~~~~~~~~~~~~~~~~~NtDGid~~~s~nV~I~n~~i~~-----gDDcIaiksg~nI~i 201 (349)
T 1hg8_A 129 --CFDITGSSQLTISGLILDNRAGDKPNAKSGSLPAAHNTDGFDISSSDHVTLDNNHVYN-----QDDCVAVTSGTNIVV 201 (349)
T ss_dssp --EEEEESCEEEEEEEEEEECGGGSSCCTTTTTSCSCCSCCSEEEESCEEEEEEEEEEEC-----SSCSEEESSEEEEEE
T ss_pred --eEEEeccCCEEEEEEEEECCCCccccccccccccCCCCCeEEEccccEEEEEeeEEec-----CCCeEEeeCCeEEEE
Confidence 489999999999999999753 336999999999999999997 679999999999999
Q ss_pred EeeEEecCCccEEEcC-------CceeEEEEeeEEcCC-ceeEEeecCCCCCcccEEeEEEEcEEEeCCc-eeEEEEeeC
Q 017991 243 KNSIVGTGDDCISIVG-------NSSLIRIRNFACGPG-HGISIGSLGKSNSSVRIHDIMVYGALISNTQ-NGVRIKTWQ 313 (362)
Q Consensus 243 ~n~~i~~gdD~i~i~s-------~~~ni~i~n~~~~~~-~gi~igs~g~~~~~~~v~ni~i~n~~i~~~~-~gi~i~~~~ 313 (362)
+||++..++ ++++++ +.+||+|+||++.+. +|+.|.+.. ...+.++||+|+|++|.+.. ++|.|....
T Consensus 202 ~n~~~~~gh-GisiGS~G~~~~~~v~nV~v~n~~~~~~~~GirIKt~~--g~~G~v~nI~~~ni~~~~v~~~~i~i~~~Y 278 (349)
T 1hg8_A 202 SNMYCSGGH-GLSIGSVGGKSDNVVDGVQFLSSQVVNSQNGCRIKSNS--GATGTINNVTYQNIALTNISTYGVDVQQDY 278 (349)
T ss_dssp EEEEEESSC-CEEEEEESSSSCCEEEEEEEEEEEEEEEEEEEEEEEET--TCCEEEEEEEEEEEEEEEEEEEEEEEEEEE
T ss_pred EeEEEeCCc-ceEEccccccccCCEEEEEEEEEEEECCCcEEEEEecC--CCCccccceEEEEEEEEccccccEEEEeec
Confidence 999999876 699966 279999999999875 589998853 23578999999999999986 699887642
Q ss_pred C---------CCceEEeEEEEeEEEecCC--ccEEEEeeeCCCCCCCCC-CCCceee
Q 017991 314 G---------GSGSATNIQFLDVLMKNVS--NPIIIDQYYCDSPVPCAN-QVCNPYA 358 (362)
Q Consensus 314 g---------~~g~i~ni~~~ni~~~~~~--~~i~i~~~y~~~~~~c~~-~~~~~~~ 358 (362)
. ....|+||+|+||+.+... .++.|. |. +.||++ .-++|.+
T Consensus 279 ~~~~~~~~p~~~~~i~~I~~~ni~gt~~~~~~~v~i~---c~-~~~c~ni~~~nv~i 331 (349)
T 1hg8_A 279 LNGGPTGKPTNGVKISNIKFIKVTGTVASSAQDWFIL---CG-DGSCSGFTFSGNAI 331 (349)
T ss_dssp CSSSBCSCCCSSEEEEEEEEEEEEEEECTTSEEEEEE---CC-SSCEEEEEEESCEE
T ss_pred cCCCCCCcccCCceEEEEEEEeEEEEeCCCCEEEEEE---eC-CCcCcCEEEEeEEE
Confidence 1 1248999999999998765 466664 44 367776 3444443
No 26
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=99.82 E-value=5.8e-19 Score=178.53 Aligned_cols=200 Identities=13% Similarity=0.031 Sum_probs=156.9
Q ss_pred cccEEEeceeeEEEEeccEEecCCCeeeecccccCCCCCCCCCCeEEEEEeecceEEEceEEeeC---CCceeEEeceee
Q 017991 136 RRWLYFNRVNHLTVQGGGTINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKVQNLRVVNS---QQMHIAFTNCLR 212 (362)
Q Consensus 136 ~~~i~~~~~~ni~I~G~G~idG~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~nv~I~~v~i~n~---~~~~i~~~~~~n 212 (362)
..+|.+.+++|++|+|....+.. .| .+.+..|+|++|+++++... ...+|++..|++
T Consensus 331 P~~i~~~~~~nv~I~giti~ns~---~~-----------------~i~~~~~~nv~i~~v~i~~~~~~NtDGidi~~s~n 390 (608)
T 2uvf_A 331 SSLMTLRGVENVYLAGFTVRNPA---FH-----------------GIMNLENHNVVANGLIHQTYDANNGDGIEFGNSQN 390 (608)
T ss_dssp CCSEEEESEEEEEEESCEEECCS---SC-----------------SEEEESCEEEEEESCEEECTTCTTCCSEEEESCEE
T ss_pred CeEEEEEeeeeEEEeCcEEecCC---CC-----------------EEEEecCCCEEEeeEEEcCCCCCCCCeEEecCCce
Confidence 35799999999999995554432 34 38999999999999998752 255899999999
Q ss_pred EEEEeEEEECCCC------CCCCCeeeecCccCEEEEeeEEecCCccEEEcCC----ceeEEEEeeEEcCC-ceeEEeec
Q 017991 213 VVISNLEVIAPAE------SPNTDGIHISASRGVEVKNSIVGTGDDCISIVGN----SSLIRIRNFACGPG-HGISIGSL 281 (362)
Q Consensus 213 v~i~n~~I~~~~~------~~~~DGI~~~~s~nv~I~n~~i~~gdD~i~i~s~----~~ni~i~n~~~~~~-~gi~igs~ 281 (362)
|+|+||+|.+.++ ..+.||++...|+||+|+||++..+++++++++. .+||+|+||+|.++ +|+.|++.
T Consensus 391 V~I~n~~i~~gDD~Iaiksg~~~~g~~~~~s~nI~I~n~~~~~ghg~~~iGS~~~~~v~nI~v~n~~~~~t~~GirIKt~ 470 (608)
T 2uvf_A 391 VMVFNNFFDTGDDCINFAAGTGEKAQEQEPMKGAWLFNNYFRMGHGAIVTGSHTGAWIEDILAENNVMYLTDIGLRAKST 470 (608)
T ss_dssp EEEESCEEECSSCSEEEECCCSGGGGGSCCEEEEEEESCEECSSSCSEEEESCCTTCEEEEEEESCEEESCSEEEEEEEE
T ss_pred EEEEeeEEecCCceEEecCCcCccccccccccCEEEEeEEEeCCCCeEEEcccCCCCEEEEEEEeEEEECCCceEEEeee
Confidence 9999999998543 2244555545589999999999999999888874 59999999999987 79999986
Q ss_pred CCCCCcccEEeEEEEcEEEeCC-ceeEEEEeeCC------------CCceEEeEEEEeEEEecCC---ccEEEEeeeCCC
Q 017991 282 GKSNSSVRIHDIMVYGALISNT-QNGVRIKTWQG------------GSGSATNIQFLDVLMKNVS---NPIIIDQYYCDS 345 (362)
Q Consensus 282 g~~~~~~~v~ni~i~n~~i~~~-~~gi~i~~~~g------------~~g~i~ni~~~ni~~~~~~---~~i~i~~~y~~~ 345 (362)
.. ..+.++||+|+|++|.+. .++|.|+.... .++.+++|+|+||+++++. .++.|.. +|..
T Consensus 471 ~g--~gG~v~nI~~~ni~m~~v~~~~i~I~~~y~~~~~~~~~~~~~~~~~~~~V~i~nI~~~n~~gt~~~i~i~g-~~~~ 547 (608)
T 2uvf_A 471 ST--IGGGARNVTFRNNAMRDLAKQVMVMTLDYADSNANIDYPPAKIPAQFYDFTLKNVTVDNSTGKNPSIEIKG-DTAN 547 (608)
T ss_dssp TT--TCCEEEEEEEEEEEEEEESSEEEEEEEECCCCSCCCSSCCCSSCCEEEEEEEEEEEEEEECSSSCSEEEEC-BGGG
T ss_pred cC--CCceEECcEEEeeEEEccccccEEEEeccCCCCcccccCCcCCCCccccEEEEeEEEEeeeceEEeEEEEE-EcCC
Confidence 32 346899999999999998 58999987643 2467999999999999985 4777764 4555
Q ss_pred CCCCCC-CCCceee
Q 017991 346 PVPCAN-QVCNPYA 358 (362)
Q Consensus 346 ~~~c~~-~~~~~~~ 358 (362)
..||++ .-++|.+
T Consensus 548 ~~p~~ni~~~nv~i 561 (608)
T 2uvf_A 548 KAWHRLVHVNNVQL 561 (608)
T ss_dssp TBCEEEEEEEEEEE
T ss_pred CCccccEEEEeEEE
Confidence 557776 3444433
No 27
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=99.81 E-value=1.9e-18 Score=164.19 Aligned_cols=215 Identities=13% Similarity=0.197 Sum_probs=163.5
Q ss_pred CCCceEEE--EeEEECCCCCCCcCC-----CCccccEEEeceeeEEEEeccEEecCCCeeeecccccCCCCCCCCCCeEE
Q 017991 110 KSRLTLEI--SGTIVAPKDPDVWKG-----LNRRRWLYFNRVNHLTVQGGGTINGMGQEWWSRSCKINTTNPCRHAPTAI 182 (362)
Q Consensus 110 ~s~v~l~~--~G~i~~~~~~~~~~~-----~~~~~~i~~~~~~ni~I~G~G~idG~G~~~~~~~~~~~~~~~~~~~~~~i 182 (362)
.++++|.+ .|+|...- ...|+. ...+.++.+.+++|++|+|.-..+. ..| .+
T Consensus 94 ~~nv~I~G~~~g~IdG~G-~~~w~~~~~~~~~rP~~i~~~~~~nv~i~~iti~ns---p~~-----------------~i 152 (362)
T 1czf_A 94 GEHITVTGASGHLINCDG-ARWWDGKGTSGKKKPKFFYAHGLDSSSITGLNIKNT---PLM-----------------AF 152 (362)
T ss_dssp EESCEEEECTTCEEECCG-GGTCCSCTTSSSCCCCCEEEEEEETEEEESCEEECC---SSC-----------------CE
T ss_pred CccEEEEcCCCcEEECCC-chhhcccCCCCCCCCeEEEEeecccEEEEEEEEecC---Ccc-----------------EE
Confidence 47888888 47777543 233432 1234578999999999999444332 223 38
Q ss_pred EEEeecceEEEceEEeeCC--------CceeEEeceeeEEEEeEEEECCCCCCCCCeeeecCccCEEEEeeEEecCCccE
Q 017991 183 TFHKCKNLKVQNLRVVNSQ--------QMHIAFTNCLRVVISNLEVIAPAESPNTDGIHISASRGVEVKNSIVGTGDDCI 254 (362)
Q Consensus 183 ~~~~~~nv~I~~v~i~n~~--------~~~i~~~~~~nv~i~n~~I~~~~~~~~~DGI~~~~s~nv~I~n~~i~~gdD~i 254 (362)
.+. |+|++|++++|.+++ ..++++..|+||+|+|++|.+ .+|+|.+.+++||+|+||++..++ ++
T Consensus 153 ~i~-~~nv~i~~~~I~~~~~d~~~~~NtDGidi~~s~nV~I~n~~i~~-----gDDcIaiksg~nI~i~n~~~~~gh-Gi 225 (362)
T 1czf_A 153 SVQ-ANDITFTDVTINNADGDTQGGHNTDAFDVGNSVGVNIIKPWVHN-----QDDCLAVNSGENIWFTGGTCIGGH-GL 225 (362)
T ss_dssp EEE-CSSEEEESCEEECGGGGTTTCCSCCSEEECSCEEEEEESCEEEC-----SSCSEEESSEEEEEEESCEEESSC-CE
T ss_pred EEe-eCCEEEEEEEEECCccccccCCCCCceeecCcceEEEEeeEEec-----CCCEEEEeCCeEEEEEEEEEeCCc-ee
Confidence 999 999999999999742 347999999999999999998 689999999999999999999876 69
Q ss_pred EEcC-------CceeEEEEeeEEcCC-ceeEEeecCCCCCcccEEeEEEEcEEEeCCc-eeEEEEeeC---------CCC
Q 017991 255 SIVG-------NSSLIRIRNFACGPG-HGISIGSLGKSNSSVRIHDIMVYGALISNTQ-NGVRIKTWQ---------GGS 316 (362)
Q Consensus 255 ~i~s-------~~~ni~i~n~~~~~~-~gi~igs~g~~~~~~~v~ni~i~n~~i~~~~-~gi~i~~~~---------g~~ 316 (362)
++++ +.+||+|+||++.+. +|+.|.+.. ...+.++||+|+|++|.+.. ++|.|.... ...
T Consensus 226 siGS~G~~~~~~v~nV~v~n~~~~~t~~GirIKt~~--g~~G~v~nI~~~ni~~~~v~~~~i~I~~~Y~~~~~~~~p~~~ 303 (362)
T 1czf_A 226 SIGSVGDRSNNVVKNVTIEHSTVSNSENAVRIKTIS--GATGSVSEITYSNIVMSGISDYGVVIQQDYEDGKPTGKPTNG 303 (362)
T ss_dssp EEEEECSSSCCEEEEEEEEEEEEEEEEEEEEEEEET--TCCEEEEEEEEEEEEEEEEEEEEEEEEEEEETTEECSCCCSS
T ss_pred EEeeccccCCCCEEEEEEEeeEEECCceEEEEEEeC--CCCceEeeEEEEeEEEECcccccEEEEEecCCCCCCCCCCCC
Confidence 9976 168999999999875 589998853 23578999999999999986 689887532 123
Q ss_pred ceEEeEEEEeEEEecCC--ccEEEEeeeCCCCCCCCC-CCCceee
Q 017991 317 GSATNIQFLDVLMKNVS--NPIIIDQYYCDSPVPCAN-QVCNPYA 358 (362)
Q Consensus 317 g~i~ni~~~ni~~~~~~--~~i~i~~~y~~~~~~c~~-~~~~~~~ 358 (362)
..|+||+|+||+.+... .++.|. |. ..||++ .-++|.+
T Consensus 304 ~~i~nI~~~ni~gt~~~~~~~i~i~---c~-~~~c~ni~~~nv~i 344 (362)
T 1czf_A 304 VTIQDVKLESVTGSVDSGATEIYLL---CG-SGSCSDWTWDDVKV 344 (362)
T ss_dssp EEEEEEEEEEEEEEECTTSEEEEEE---CC-TTTEEEEEEEEEEE
T ss_pred ceEEEEEEEEEEEEecCCceEEEEE---eC-CCcCcCEEEEeEEE
Confidence 58999999999998865 466666 33 456765 3444443
No 28
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=99.76 E-value=4.9e-17 Score=157.58 Aligned_cols=190 Identities=15% Similarity=0.209 Sum_probs=150.1
Q ss_pred cccEEEeceeeEEEEeccEEecCCCeeeecccccCCCCCCCCCCeEEEEEeecceEEEceEEeeC---CCceeEEeceee
Q 017991 136 RRWLYFNRVNHLTVQGGGTINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKVQNLRVVNS---QQMHIAFTNCLR 212 (362)
Q Consensus 136 ~~~i~~~~~~ni~I~G~G~idG~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~nv~I~~v~i~n~---~~~~i~~~~~~n 212 (362)
..++.+.+++|++|+|..+.+.. .| .+.+..|+|++|++++|.+. ...+|++.. +|
T Consensus 127 p~~i~~~~~~nv~I~~iti~nsp---~~-----------------~i~i~~~~nv~I~n~~I~~~d~~ntDGidi~~-~n 185 (422)
T 1rmg_A 127 ARILRLTDVTHFSVHDIILVDAP---AF-----------------HFTMDTCSDGEVYNMAIRGGNEGGLDGIDVWG-SN 185 (422)
T ss_dssp CEEEEEEEEEEEEEEEEEEECCS---SC-----------------SEEEEEEEEEEEEEEEEECCSSTTCCSEEEEE-EE
T ss_pred ceEEEEcccceEEEECeEEECCC---ce-----------------EEEEeCcCCEEEEeEEEECCCCCCCccEeecC-Ce
Confidence 45788999999999994443321 23 38999999999999999972 356799998 99
Q ss_pred EEEEeEEEECCCCCCCCCeeeecC-ccCEEEEeeEEecCCccEEEcC-----CceeEEEEeeEEcCC-ceeEEeecCCCC
Q 017991 213 VVISNLEVIAPAESPNTDGIHISA-SRGVEVKNSIVGTGDDCISIVG-----NSSLIRIRNFACGPG-HGISIGSLGKSN 285 (362)
Q Consensus 213 v~i~n~~I~~~~~~~~~DGI~~~~-s~nv~I~n~~i~~gdD~i~i~s-----~~~ni~i~n~~~~~~-~gi~igs~g~~~ 285 (362)
|+|+||.|.. ..|+|.+.+ ++||+|+||++..++ ++++++ +.+||+|+||++.+. +|+.|.+.+
T Consensus 186 V~I~n~~i~~-----gDD~Iai~s~~~nI~I~n~~~~~~~-GisIGS~g~~~~v~nV~v~n~~~~~~~~Gi~Ikt~~--- 256 (422)
T 1rmg_A 186 IWVHDVEVTN-----KDECVTVKSPANNILVESIYCNWSG-GCAMGSLGADTDVTDIVYRNVYTWSSNQMYMIKSNG--- 256 (422)
T ss_dssp EEEEEEEEES-----SSEEEEEEEEEEEEEEEEEEEESSS-EEEEEEECTTEEEEEEEEEEEEEESSSCSEEEEEBB---
T ss_pred EEEEeeEEeC-----CCCeEEeCCCCcCEEEEeEEEcCCc-ceeecccCCCCcEEEEEEEeEEEeccceEEEEEecC---
Confidence 9999999987 679999987 999999999988765 999966 269999999999875 689998743
Q ss_pred CcccEEeEEEEcEEEeCCceeEEEEeeC-------CCCceEEeEEEEeEEEecC----CccEEEEeeeCCCCCCCCC-CC
Q 017991 286 SSVRIHDIMVYGALISNTQNGVRIKTWQ-------GGSGSATNIQFLDVLMKNV----SNPIIIDQYYCDSPVPCAN-QV 353 (362)
Q Consensus 286 ~~~~v~ni~i~n~~i~~~~~gi~i~~~~-------g~~g~i~ni~~~ni~~~~~----~~~i~i~~~y~~~~~~c~~-~~ 353 (362)
..+.++||+|+|++|.+..++|.|.... .....|+||+|+||+.+.. ..++.|. |....+|++ .-
T Consensus 257 g~G~v~nI~~~NI~~~~v~~~i~i~~~y~~~~~~~~~~~~i~nI~~~nI~gt~~~g~~~~~i~i~---~~~~~~~~ni~l 333 (422)
T 1rmg_A 257 GSGTVSNVLLENFIGHGNAYSLDIDGYWSSMTAVAGDGVQLNNITVKNWKGTEANGATRPPIRVV---CSDTAPCTDLTL 333 (422)
T ss_dssp CCEEEEEEEEEEEEEEEESCSEEEETBCTTSCCBSSSCCEEEEEEEEEEEEEESCTTTSCSEEEE---CBTTBCEEEEEE
T ss_pred CCcEEEEEEEEeEEEECccccEEEEeeccCCCcccCCCceEEEEEEEeEEEEecccccceeEEEE---eCCCCcEeeEEE
Confidence 2468999999999999998899987542 1235899999999999874 2367665 455556765 34
Q ss_pred Cceee
Q 017991 354 CNPYA 358 (362)
Q Consensus 354 ~~~~~ 358 (362)
++|.+
T Consensus 334 ~nv~i 338 (422)
T 1rmg_A 334 EDIAI 338 (422)
T ss_dssp EEEEE
T ss_pred EeEEE
Confidence 44443
No 29
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=99.76 E-value=1e-17 Score=157.49 Aligned_cols=213 Identities=15% Similarity=0.148 Sum_probs=160.4
Q ss_pred CCceEEEE-eEEECCCCCCCcCC------CCccccEEEeceeeEEEEeccEEecCCCeeeecccccCCCCCCCCCCeEEE
Q 017991 111 SRLTLEIS-GTIVAPKDPDVWKG------LNRRRWLYFNRVNHLTVQGGGTINGMGQEWWSRSCKINTTNPCRHAPTAIT 183 (362)
Q Consensus 111 s~v~l~~~-G~i~~~~~~~~~~~------~~~~~~i~~~~~~ni~I~G~G~idG~G~~~~~~~~~~~~~~~~~~~~~~i~ 183 (362)
++++|.++ |+|...- ...|+. ...+.++.+.+++ ++|+|.-..+. ..| .+.
T Consensus 66 ~ni~I~G~~G~idG~G-~~ww~~~~~~~~~~rP~~i~~~~~~-v~i~giti~ns---p~~-----------------~i~ 123 (335)
T 1k5c_A 66 TGINFVGADHIFDGNG-ALYWDGKGTNNGTHKPHPFLKIKGS-GTYKKFEVLNS---PAQ-----------------AIS 123 (335)
T ss_dssp EEEEEECTTCEEECCG-GGTCCSCTTTSSSCCCCCSEEEEEE-EEEESCEEESC---SSC-----------------CEE
T ss_pred cCEEEEeCccEEcCCh-hHhhhcccccCCCCCCeEEEEeceE-EEEEEEEEECC---Ccc-----------------eEE
Confidence 67777773 7887643 123432 1234578888888 99999444332 234 389
Q ss_pred EEeecc-eEEEceEEeeCC---------CceeEEeceeeEEEEeEEEECCCCCCCCCeeeecCccCEEEEeeEEecCCcc
Q 017991 184 FHKCKN-LKVQNLRVVNSQ---------QMHIAFTNCLRVVISNLEVIAPAESPNTDGIHISASRGVEVKNSIVGTGDDC 253 (362)
Q Consensus 184 ~~~~~n-v~I~~v~i~n~~---------~~~i~~~~~~nv~i~n~~I~~~~~~~~~DGI~~~~s~nv~I~n~~i~~gdD~ 253 (362)
+..|+| |+|+++++.++. ..++++ .|+||+|+||.|.+ ..|+|.+.+++||+|+||++..++ +
T Consensus 124 i~~~~n~v~i~~v~I~~~~~d~~~~~~NtDGidi-~s~nV~I~n~~i~~-----gDDcIaiksg~nI~i~n~~~~~gh-G 196 (335)
T 1k5c_A 124 VGPTDAHLTLDGITVDDFAGDTKNLGHNTDGFDV-SANNVTIQNCIVKN-----QDDCIAINDGNNIRFENNQCSGGH-G 196 (335)
T ss_dssp EEEEEEEEEEESCEEECGGGGGGGCCCSCCSEEE-ECSSEEEESCEEES-----SSCSEEEEEEEEEEEESCEEESSC-C
T ss_pred EEccCCeEEEEEEEEECCCCcccccCCCCCeEcc-cCCeEEEEeeEEEc-----CCCEEEeeCCeeEEEEEEEEECCc-c
Confidence 999999 999999999853 336999 99999999999998 678999999999999999999875 6
Q ss_pred EEEcC-----CceeEEEEeeEEcCC-ceeEEeecCCCCCc-ccEEeEEEEcEEEeCCc-eeEEEEeeCC-------CCce
Q 017991 254 ISIVG-----NSSLIRIRNFACGPG-HGISIGSLGKSNSS-VRIHDIMVYGALISNTQ-NGVRIKTWQG-------GSGS 318 (362)
Q Consensus 254 i~i~s-----~~~ni~i~n~~~~~~-~gi~igs~g~~~~~-~~v~ni~i~n~~i~~~~-~gi~i~~~~g-------~~g~ 318 (362)
+++++ +.+||+|+||++.++ .|+.|.+... .. +.++||+|+|++|.+.. ++|.|....+ ....
T Consensus 197 isIGS~g~~~~v~nV~v~n~~~~~t~~girIKt~~g--~~~G~v~nI~f~ni~~~~v~~~~i~i~~~Y~~~~~~p~~~~~ 274 (335)
T 1k5c_A 197 ISIGSIATGKHVSNVVIKGNTVTRSMYGVRIKAQRT--ATSASVSGVTYDANTISGIAKYGVLISQSYPDDVGNPGTGAP 274 (335)
T ss_dssp EEEEEECTTCEEEEEEEESCEEEEEEEEEEEEEETT--CCSCEEEEEEEESCEEEEEEEEEEEEEEEETSSSSSCCSSSC
T ss_pred CeEeeccCCCCEEEEEEEeeEEECCCceEEEEEeCC--CCcceEeeeEEEEEEEEccccccEEEEeeCCCCCCCCCCCce
Confidence 99975 259999999999875 5899988532 23 67999999999999986 6998886421 1358
Q ss_pred EEeEEEEeEEEecC----CccEEEEeeeCCCCCCCCC-CCCceeee
Q 017991 319 ATNIQFLDVLMKNV----SNPIIIDQYYCDSPVPCAN-QVCNPYAT 359 (362)
Q Consensus 319 i~ni~~~ni~~~~~----~~~i~i~~~y~~~~~~c~~-~~~~~~~~ 359 (362)
|+||+|+||++.+. ..|+.|. |.. ||++ .-++|.++
T Consensus 275 i~nI~~~nI~~~Gt~~~~~~~i~i~---c~~--~c~ni~~~nv~i~ 315 (335)
T 1k5c_A 275 FSDVNFTGGATTIKVNNAATRVTVE---CGN--CSGNWNWSQLTVT 315 (335)
T ss_dssp EEEEEECSSCEEEEECTTCEEEEEE---CSS--EESEEEEEEEEEE
T ss_pred EEEEEEEEEEEeeEEcCCceEEEEE---CCC--cCCCEEEEeEEEE
Confidence 99999999995532 3477766 433 7877 45555544
No 30
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=99.76 E-value=2.9e-17 Score=163.44 Aligned_cols=209 Identities=12% Similarity=0.089 Sum_probs=156.3
Q ss_pred CcE-EEEcCCcEEEeeeeeccCCCCCCceEEEEeEEECCCCCCCcC-------CC-CccccEEEe------ceeeEEEEe
Q 017991 87 RTK-IVFSAGYTFLIHPIDISGPCKSRLTLEISGTIVAPKDPDVWK-------GL-NRRRWLYFN------RVNHLTVQG 151 (362)
Q Consensus 87 g~~-v~~P~G~~Y~i~~l~l~~~~~s~v~l~~~G~i~~~~~~~~~~-------~~-~~~~~i~~~------~~~ni~I~G 151 (362)
+.+ |++++| .++.+++.+.+ ..+++|.+.|+|.+... ..|. .. .....+.+. +++|+.|+|
T Consensus 264 nvt~L~L~~G-A~l~g~i~~~~--~~nv~ItG~GtIDG~G~-~ww~~~~~~~~~~~~rp~~i~~~~~~~~~~c~NV~I~G 339 (574)
T 1ogo_X 264 NTYWVYLAPG-AYVKGAIEYFT--KQNFYATGHGILSGENY-VYQANAGDNYIAVKSDSTSLRMWWHNNLGGGQTWYCVG 339 (574)
T ss_dssp TCCEEEECTT-EEEESCEEECC--SSCEEEESSCEEECTTS-CTTCBTTTTTBSCCCTTTBCCSEEECSCCSSEEEEEES
T ss_pred CCceEEecCC-cEEEccEEEeC--ceeEEEEeCEEEeCCCc-ccccccccccccccCCcceEEEEeccccCCceeEEEEC
Confidence 566 999999 99999999976 67888888899976531 1111 10 111223333 899999999
Q ss_pred ccEEecCCCeeeecccccCCCCCCCCCCeEEEEEeecce--EEEceEEeeCCCc---eeEEeceeeEEEEeEEEECCCCC
Q 017991 152 GGTINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNL--KVQNLRVVNSQQM---HIAFTNCLRVVISNLEVIAPAES 226 (362)
Q Consensus 152 ~G~idG~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~nv--~I~~v~i~n~~~~---~i~~~~~~nv~i~n~~I~~~~~~ 226 (362)
..+.+. .+|. +++..|+|| +|+++++.+++.+ +|++. +||+|+||+|.+
T Consensus 340 iti~NS---p~w~-----------------i~~~~c~nV~~~I~nv~i~~~~~~nTDGIDi~--~NV~I~nc~I~~---- 393 (574)
T 1ogo_X 340 PTINAP---PFNT-----------------MDFNGNSGISSQISDYKQVGAFFFQTDGPEIY--PNSVVHDVFWHV---- 393 (574)
T ss_dssp CEEECC---SSCS-----------------EEECSSSCEEEEEEEEEEECCCSTTCCCCBCC--TTCEEEEEEEEE----
T ss_pred eEEECC---CCcE-----------------EeecCCCChhhEEEeeEeeCCCCCCCccCccc--CCEEEEeeEEEC----
Confidence 776653 2343 788899999 9999999875444 68887 999999999999
Q ss_pred CCCCeeeecCccCEEEEeeEEecCCc-c-EEEcC---CceeEEEEeeEEcCCc---------eeEEeecCCCC------C
Q 017991 227 PNTDGIHISASRGVEVKNSIVGTGDD-C-ISIVG---NSSLIRIRNFACGPGH---------GISIGSLGKSN------S 286 (362)
Q Consensus 227 ~~~DGI~~~~s~nv~I~n~~i~~gdD-~-i~i~s---~~~ni~i~n~~~~~~~---------gi~igs~g~~~------~ 286 (362)
+.|+|.+.+ +||+|+||++..+.. + |++++ ..+||+|+||++.... +..+|++.-+. .
T Consensus 394 -gDDcIaIks-~NI~I~nc~i~~g~g~g~IsIGS~~g~V~NV~v~N~~i~~~~~~~~~~~~~g~iiGs~~~y~~~~~~~~ 471 (574)
T 1ogo_X 394 -NDDAIKIYY-SGASVSRATIWKCHNDPIIQMGWTSRDISGVTIDTLNVIHTRYIKSETVVPSAIIGASPFYASGMSPDS 471 (574)
T ss_dssp -SSCSEECCS-TTCEEEEEEEEECSSSCSEECCSSCCCEEEEEEEEEEEEECCCSSCCTTTTCEEEEECCCSSSSCCCEE
T ss_pred -CCCEEEECC-ccEEEEeEEEECCCCCceEEEcCCCCcEEEEEEEeEEEECCcccceeccccceeeccccccccccccCC
Confidence 678998887 899999999998754 4 88875 4799999999996532 34445432110 1
Q ss_pred cccEEeEEEEcEEEeCCceeEEEEeeCCCCceEEeEEEEeEEEec
Q 017991 287 SVRIHDIMVYGALISNTQNGVRIKTWQGGSGSATNIQFLDVLMKN 331 (362)
Q Consensus 287 ~~~v~ni~i~n~~i~~~~~gi~i~~~~g~~g~i~ni~~~ni~~~~ 331 (362)
...+ ||+|+|+++.+...++ |+..+ .+.|+||+|+||++.+
T Consensus 472 g~gV-NI~f~NI~~~~v~~~i-i~i~p--~~~I~nI~~~NI~i~g 512 (574)
T 1ogo_X 472 RKSI-SMTVSNVVCEGLCPSL-FRITP--LQNYKNFVVKNVAFPD 512 (574)
T ss_dssp EEEE-EEEEEEEEECSSBCEE-EEECC--SEEEEEEEEEEEEETT
T ss_pred CceE-EEEEEeEEEEceeEee-EEECC--CCCEEEEEEEeEEEeC
Confidence 1238 9999999999988875 44433 3579999999999987
No 31
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=99.72 E-value=1.5e-16 Score=158.26 Aligned_cols=217 Identities=12% Similarity=0.149 Sum_probs=155.1
Q ss_pred CCcE-EEEcCCcEEEeeeeecc-CCCCCCceEEEEeEEECCCCC------CCcCC--CCccccEEE------eceeeEEE
Q 017991 86 ARTK-IVFSAGYTFLIHPIDIS-GPCKSRLTLEISGTIVAPKDP------DVWKG--LNRRRWLYF------NRVNHLTV 149 (362)
Q Consensus 86 gg~~-v~~P~G~~Y~i~~l~l~-~~~~s~v~l~~~G~i~~~~~~------~~~~~--~~~~~~i~~------~~~~ni~I 149 (362)
++.+ |++++| .|+.+++.+. + .++++|.+.|+|.+.... ..|.. ......+.+ .+++|+.|
T Consensus 221 s~~~~L~l~~G-A~L~gs~~~~~~--~~nv~ItG~GtIDG~G~~ww~~~~~~~~~~~~~rp~~i~~~~~~~~~~c~nV~I 297 (549)
T 1x0c_A 221 SSVTWVYFAPG-AYVKGAVEFLST--ASEVKASGHGVLSGEQYVWYADPDEGYQKASGANNNGLRMWRGTLGNSSQTFVL 297 (549)
T ss_dssp TTCCEEEECTT-EEEESCEEECCC--SSEEEEESSCEEECTTSCTTEEGGGTTEECGGGCSCCCCSEEEECCSSCEEEEE
T ss_pred CCCCeEecCCC-CEEEEEEEEecC--ceeEEEEeeEEEECCCceecccCcccccccccCCCceEEEeeccccCCceEEEE
Confidence 3677 999999 9999888885 3 568888888999876421 11210 001122334 88999999
Q ss_pred EeccEEecCCCeeeecccccCCCCCCCCCCeEEEEE-ee-cc--eEEEceEEeeCCC---ceeEEeceeeEEEEeEEEEC
Q 017991 150 QGGGTINGMGQEWWSRSCKINTTNPCRHAPTAITFH-KC-KN--LKVQNLRVVNSQQ---MHIAFTNCLRVVISNLEVIA 222 (362)
Q Consensus 150 ~G~G~idG~G~~~~~~~~~~~~~~~~~~~~~~i~~~-~~-~n--v~I~~v~i~n~~~---~~i~~~~~~nv~i~n~~I~~ 222 (362)
+|..+.+. .+|. +++. .| ++ ++|+++++.++.. .++++. +||+|+||+|.+
T Consensus 298 ~Giti~Ns---p~w~-----------------i~i~~~~~~ni~V~I~n~~i~~~~~~NTDGidi~--~nV~I~n~~i~~ 355 (549)
T 1x0c_A 298 NGVTVSAP---PFNS-----------------MDWSGNSLDLITCRVDDYKQVGAFYGQTDGLEMY--PGTILQDVFYHT 355 (549)
T ss_dssp ESCEEECC---SSCS-----------------EEEECSCGGGEEEEEEEEEEECCCBTTCCCCBCC--TTCEEEEEEEEE
T ss_pred ECcEEECC---Ccee-----------------EEeeccCCCCCeEEEEeeEeEcCCCCCCCccccc--CCEEEEeeEEeC
Confidence 99665543 3454 6644 45 69 9999999987543 367777 999999999999
Q ss_pred CCCCCCCCeeeecCccCEEEEeeEEecCCc-c-EEEcC---CceeEEEEeeEEcCCc-------eeEEeec-----C---
Q 017991 223 PAESPNTDGIHISASRGVEVKNSIVGTGDD-C-ISIVG---NSSLIRIRNFACGPGH-------GISIGSL-----G--- 282 (362)
Q Consensus 223 ~~~~~~~DGI~~~~s~nv~I~n~~i~~gdD-~-i~i~s---~~~ni~i~n~~~~~~~-------gi~igs~-----g--- 282 (362)
+.|+|.+.+ +||+|+||++..+.. + |++++ ..+||+|+||++..+. |..|.+. +
T Consensus 356 -----gDDcIaIks-~NI~I~n~~~~~~~g~~~IsiGs~~~~V~NV~v~n~~i~~s~~~k~~~~g~iI~~~~~~~~g~~~ 429 (549)
T 1x0c_A 356 -----DDDGLKMYY-SNVTARNIVMWKESVAPVVEFGWTPRNTENVLFDNVDVIHQAYANAGNNPGIFGAVNNYLYAPDG 429 (549)
T ss_dssp -----SSCCEECCS-SSEEEEEEEEEECSSSCSEECCBSCCCEEEEEEEEEEEEECCCCSGGGCCCSEEECCBTTTCTTS
T ss_pred -----CCCEEEECC-CCEEEEeeEEEcCCCCceEEECCCCCcEEEEEEEeeEEECccccccccceEEEecccccccCccc
Confidence 678999987 899999999997643 5 88875 4799999999996543 3224441 1
Q ss_pred CC-CCcccEEeEEEEcEEEeCCc-eeEEEEeeCCCC-ceEEeEEEEeEEEecCC
Q 017991 283 KS-NSSVRIHDIMVYGALISNTQ-NGVRIKTWQGGS-GSATNIQFLDVLMKNVS 333 (362)
Q Consensus 283 ~~-~~~~~v~ni~i~n~~i~~~~-~gi~i~~~~g~~-g~i~ni~~~ni~~~~~~ 333 (362)
.. +..+.++||+|+|++|.+.. .|+.+....+.+ +.|+||+|+||++++.+
T Consensus 430 ~~~d~~G~i~nI~f~NI~i~nv~~~g~~~~~~~g~pg~~I~nI~i~NI~i~~~~ 483 (549)
T 1x0c_A 430 LSSNHSTGNSNMTVRNITWSNFRAEGSSSALFRINPIQNLDNISIKNVSIESFE 483 (549)
T ss_dssp CCSCCCCBEEEEEEEEEEEEEEEEEEEECCSEEECCSEEEEEEEEEEEEEEEEC
T ss_pred cCcCCCceEccEEEEeEEEEeEEEeceEEeeecCCCCCcCccEEEEEEEEEccc
Confidence 00 12568999999999998876 565442222222 36999999999998876
No 32
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=99.64 E-value=4.7e-15 Score=139.39 Aligned_cols=196 Identities=11% Similarity=0.182 Sum_probs=120.7
Q ss_pred CCCCCeeEEeeec----cccCCCCcchHHHHHHHHHHHcC------CCCCcEEEEcCCcEEEe-eeeeccCCCCCCceEE
Q 017991 48 RSKSKRVIFVGDF----GAKGDGFNDDTEAFANAWKKACS------FPARTKIVFSAGYTFLI-HPIDISGPCKSRLTLE 116 (362)
Q Consensus 48 ~~~~~~~~~v~~~----Ga~~dg~~ddt~aiq~Ai~~a~~------~~gg~~v~~P~G~~Y~i-~~l~l~~~~~s~v~l~ 116 (362)
+.....+++|++| ++++|+.+|++++|+++|++..+ ++.|++|++|+| +|.+ +++.+. ++.++|.
T Consensus 8 ~~~~~~~~~vt~~~~~~~~~~~~~~d~~~~i~~~ia~~~~~~~~~~A~pGdvI~L~~G-~Y~l~g~ivId---kp~LtL~ 83 (410)
T 2inu_A 8 PLNSPNTYDVTTWRIKAHPEVTAQSDIGAVINDIIADIKQRQTSPDARPGAAIIIPPG-DYDLHTQVVVD---VSYLTIA 83 (410)
T ss_dssp ----CCEEETTTCCBTTBTTCCHHHHHHHHHHHHHHHHHHHCCCTTSCCCEEEECCSE-EEEECSCEEEC---CTTEEEE
T ss_pred ccccCceEEEEEecccCCCcCCCchhHHHHHHHHHHHhhcccccccCCCCCEEEECCC-eeccCCcEEEe---cCcEEEE
Confidence 3456789999999 89999999999999999997653 355899999999 9986 788882 3347777
Q ss_pred EEe--E----EECCCCCCCcCCC-------------CccccEEEec-----eeeEEEEeccEEecC-----CCeeeeccc
Q 017991 117 ISG--T----IVAPKDPDVWKGL-------------NRRRWLYFNR-----VNHLTVQGGGTINGM-----GQEWWSRSC 167 (362)
Q Consensus 117 ~~G--~----i~~~~~~~~~~~~-------------~~~~~i~~~~-----~~ni~I~G~G~idG~-----G~~~~~~~~ 167 (362)
+++ . |......+.|... ...+.|..+. .++|+|+| -+|+|- |....
T Consensus 84 G~~~g~~s~~Id~~~~~~g~~~~~g~Gs~I~V~a~~~~g~a~~V~~~g~~r~s~V~~~~-v~I~G~~~~~~G~s~~---- 158 (410)
T 2inu_A 84 GFGHGFFSRSILDNSNPTGWQNLQPGASHIRVLTSPSAPQAFLVKRAGDPRLSGIVFRD-FCLDGVGFTPGKNSYH---- 158 (410)
T ss_dssp CSCCCCCCHHHHHTSCCTTCSCCSCCSEEEEECCCTTSCEEEEECCCSSSCEECCEEES-CEEECCCCSSSTTSCC----
T ss_pred ecCCCcceeEEecccccCcccccCCCCcEEEEeccccccceeEEeeccCcccCCcEECC-EEEECCEeecCCCCcc----
Confidence 653 2 3211111232110 1122233322 24455544 233333 32211
Q ss_pred ccCCCCCCCCCCeEEEEEe-ecceEEEceEEeeCCCceeEEeceeeEEEEeEEEECCCCCCCCCeeeecC-ccCEEEEee
Q 017991 168 KINTTNPCRHAPTAITFHK-CKNLKVQNLRVVNSQQMHIAFTNCLRVVISNLEVIAPAESPNTDGIHISA-SRGVEVKNS 245 (362)
Q Consensus 168 ~~~~~~~~~~~~~~i~~~~-~~nv~I~~v~i~n~~~~~i~~~~~~nv~i~n~~I~~~~~~~~~DGI~~~~-s~nv~I~n~ 245 (362)
....+|.+.. +.+++|+++.|.+ ..++|.+..+++++|++.+|.. ...||++++ ++...|+++
T Consensus 159 ---------~~dAGI~v~~~~d~~~I~nn~i~~-~~fGI~l~~a~~~~I~~N~I~e-----~GNgI~L~G~~~~~~I~~N 223 (410)
T 2inu_A 159 ---------NGKTGIEVASDNDSFHITGMGFVY-LEHALIVRGADALRVNDNMIAE-----CGNCVELTGAGQATIVSGN 223 (410)
T ss_dssp ---------CSCEEEEECSCEESCEEESCEEES-CSEEEEETTEESCEEESCEEES-----SSEEEEECSCEESCEEESC
T ss_pred ---------cCceeEEEeccCCeEEEECCEEec-ccEEEEEccCCCcEEECCEEEe-----cCCceeeccccccceEecc
Confidence 2234677765 8889999999998 4789999999999999999994 334455544 445555555
Q ss_pred EEecCCcc--EEEcCCceeEEEEee
Q 017991 246 IVGTGDDC--ISIVGNSSLIRIRNF 268 (362)
Q Consensus 246 ~i~~gdD~--i~i~s~~~ni~i~n~ 268 (362)
.+..++|+ |.++. +++.+|+++
T Consensus 224 ~i~~~~dG~gIyl~n-s~~~~I~~N 247 (410)
T 2inu_A 224 HMGAGPDGVTLLAEN-HEGLLVTGN 247 (410)
T ss_dssp EEECCTTSEEEEEES-EESCEEESC
T ss_pred eeeecCCCCEEEEEe-CCCCEEECC
Confidence 55555444 33333 334444444
No 33
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=99.34 E-value=1.5e-10 Score=114.65 Aligned_cols=159 Identities=16% Similarity=0.091 Sum_probs=113.5
Q ss_pred ccccEEEeceeeEEEEeccEEecCCCeeeecccccCCCCCCCCCCeEEEEEeecceEEEceEEeeCCCceeEEec-----
Q 017991 135 RRRWLYFNRVNHLTVQGGGTINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKVQNLRVVNSQQMHIAFTN----- 209 (362)
Q Consensus 135 ~~~~i~~~~~~ni~I~G~G~idG~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~nv~I~~v~i~n~~~~~i~~~~----- 209 (362)
.+.++.+.+++|+.|+|.-..+... ..+.+..+.+ | .+++++.
T Consensus 133 RP~lI~f~~c~NV~I~gVti~NSp~--------------------~gI~I~~~~~---------N---DGid~DGi~fd~ 180 (609)
T 3gq8_A 133 RESNLSIRACHNVYIRDIEAVDCTL--------------------HGIDITCGGL---------D---YPYLGDGTTAPN 180 (609)
T ss_dssp TTCSEEEESCEEEEEEEEEEESCSS--------------------CSEEEECSSS---------S---CCCCCTTCCCSS
T ss_pred CccEEEEEeeceEEEEeeEEEeCCC--------------------CCeEEeCCCC---------C---ccccCCCccccc
Confidence 3457899999999999933222111 1133322221 1 2344444
Q ss_pred -eeeEEEEeEEEECCCCCCCCCeeeecCccCEEEEeeEEecC-----CccEEEcCCceeEEEEeeEEcCC-ceeEEeecC
Q 017991 210 -CLRVVISNLEVIAPAESPNTDGIHISASRGVEVKNSIVGTG-----DDCISIVGNSSLIRIRNFACGPG-HGISIGSLG 282 (362)
Q Consensus 210 -~~nv~i~n~~I~~~~~~~~~DGI~~~~s~nv~I~n~~i~~g-----dD~i~i~s~~~ni~i~n~~~~~~-~gi~igs~g 282 (362)
|+||+|+||+|.+ ..+|||.+.+|+||+|+||++... ..++.+.++++||+|+||++.++ .|+.|.+.
T Consensus 181 ~S~NV~I~Nc~I~~----tGDDcIaIksseNI~I~Nc~~~gp~G~S~~~GIsIGsgs~NVtV~Nc~i~nt~~GIrIKt~- 255 (609)
T 3gq8_A 181 PSENIWIENCEATG----FGDDGITTHHSQYINILNCYSHDPRLTANCNGFEIDDGSRHVVLSNNRSKGCYGGIEIKAH- 255 (609)
T ss_dssp CCEEEEEESCEEES----CSSCSEEECSCEEEEEESCEEECCSSCSSCCSEEECTTCEEEEEESEEEESSSEEEEEEEC-
T ss_pred cceeEEEEeeEEEe----cCCCEEEecCCeeEEEEeEEEECCCCCCCcccEEccCCcccEEEEeeEEECCCCEEEEEec-
Confidence 9999999999976 367999999999999999999544 57899998889999999999876 58999884
Q ss_pred CCCCcccEEeEEEEcEEEeCCce--eEEEEeeCC----CCceEEeEEEEeEEEecC
Q 017991 283 KSNSSVRIHDIMVYGALISNTQN--GVRIKTWQG----GSGSATNIQFLDVLMKNV 332 (362)
Q Consensus 283 ~~~~~~~v~ni~i~n~~i~~~~~--gi~i~~~~g----~~g~i~ni~~~ni~~~~~ 332 (362)
.....++||+|+|+...+.-. .++..-... ......||+++|++....
T Consensus 256 --~~~~~v~NV~I~n~vs~~nvrsyn~r~iG~~~a~dp~s~~a~nV~l~n~~~~~p 309 (609)
T 3gq8_A 256 --GDAPAAYNISINGHMSVEDVRSYNFRHIGHHAATAPQSVSAKNIVASNLVSIRP 309 (609)
T ss_dssp --TTSCCCEEEEEEEEEEESCSEEEEEEETTSCSTTSCCCSSCEEEEEEEEEEESC
T ss_pred --CCCCccccEEEECCEeecCceEecceEEccccCCCCCcceecceEeecceEEee
Confidence 245678999999987665533 454332221 234688999999888654
No 34
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=99.30 E-value=2.4e-10 Score=109.57 Aligned_cols=249 Identities=12% Similarity=0.148 Sum_probs=148.6
Q ss_pred CCCCeeEEeeecccc-CCCCcchHH-HHHHHHHHHcCCCCCcEEEEcCCcEEE--e-----eeeecc--CCCCCCceEEE
Q 017991 49 SKSKRVIFVGDFGAK-GDGFNDDTE-AFANAWKKACSFPARTKIVFSAGYTFL--I-----HPIDIS--GPCKSRLTLEI 117 (362)
Q Consensus 49 ~~~~~~~~v~~~Ga~-~dg~~ddt~-aiq~Ai~~a~~~~gg~~v~~P~G~~Y~--i-----~~l~l~--~~~~s~v~l~~ 117 (362)
...+.+++|..-|-. ++|.+-+++ .||+|++. ++. |.+|+|.+| +|. + ..+.+. |-....++|..
T Consensus 11 ~~~~~~~yVsp~Gsd~~~G~t~~~P~tiq~Ai~~-a~p--GdtI~l~~G-tY~~~~~e~~~~~i~~~~sGt~~~pIti~~ 86 (400)
T 1ru4_A 11 ISTKRIYYVAPNGNSSNNGSSFNAPMSFSAAMAA-VNP--GELILLKPG-TYTIPYTQGKGNTITFNKSGKDGAPIYVAA 86 (400)
T ss_dssp CCCSCEEEECTTCCTTCCSSSTTSCBCHHHHHHH-CCT--TCEEEECSE-EEECCCBTTBCCCEEECCCCBTTBCEEEEE
T ss_pred ccCccEEEEcCCCCCCCCCccccCCccHHHHHhh-CCC--CCEEEECCC-eEccccccccceeEEecCCCCCCCCEEEEE
Confidence 445678888766643 333133222 79999995 333 799999999 998 2 334442 10012255555
Q ss_pred Ee----EEECCCCC-CCcCCCCccccEEEeceeeEEEEeccEEecCCCeeeecccccCCCCCCCCCCeEEEEEeecceEE
Q 017991 118 SG----TIVAPKDP-DVWKGLNRRRWLYFNRVNHLTVQGGGTINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKV 192 (362)
Q Consensus 118 ~G----~i~~~~~~-~~~~~~~~~~~i~~~~~~ni~I~G~G~idG~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~nv~I 192 (362)
++ +|. ...+ ..|... ...|.+ ..+.++|+| -+|...+. ..|.+.. .+.+|
T Consensus 87 ~~g~~~vI~-~~~~~g~~~~~--~~~i~i-~~~~~~i~g-l~I~n~g~-------------------~GI~v~g-s~~~i 141 (400)
T 1ru4_A 87 ANCGRAVFD-FSFPDSQWVQA--SYGFYV-TGDYWYFKG-VEVTRAGY-------------------QGAYVIG-SHNTF 141 (400)
T ss_dssp GGGCCEEEE-CCCCTTCCCTT--CCSEEE-CSSCEEEES-EEEESCSS-------------------CSEEECS-SSCEE
T ss_pred ecCCCCEEe-CCccCCccccc--eeEEEE-ECCeEEEEe-EEEEeCCC-------------------CcEEEeC-CCcEE
Confidence 42 233 1110 011000 022444 336666666 22221111 1466665 78899
Q ss_pred EceEEeeCCCceeEEece-eeEEEEeEEEECCCC----CCCCCeeeecCc--cCEEEEeeEEec-CCccEEEcCCceeEE
Q 017991 193 QNLRVVNSQQMHIAFTNC-LRVVISNLEVIAPAE----SPNTDGIHISAS--RGVEVKNSIVGT-GDDCISIVGNSSLIR 264 (362)
Q Consensus 193 ~~v~i~n~~~~~i~~~~~-~nv~i~n~~I~~~~~----~~~~DGI~~~~s--~nv~I~n~~i~~-gdD~i~i~s~~~ni~ 264 (362)
+++++.+....+|.+... .+.+|++|+|....+ ..+.|||.++.+ ++.+|++|.+.. .||++.+......++
T Consensus 142 ~n~~i~~n~~~GI~l~~~~s~n~I~nn~i~~N~d~~~~g~~~dG~~~~~~~g~Gn~~~~~~~~~N~ddGidl~~~~~~v~ 221 (400)
T 1ru4_A 142 ENTAFHHNRNTGLEINNGGSYNTVINSDAYRNYDPKKNGSMADGFGPKQKQGPGNRFVGCRAWENSDDGFDLFDSPQKVV 221 (400)
T ss_dssp ESCEEESCSSCSEEECTTCCSCEEESCEEECCCCTTTTTSSCCSEEECTTCCSCCEEESCEEESCSSCSEECTTCCSCCE
T ss_pred EeEEEECCCceeEEEEcccCCeEEEceEEEcccCccccCcccceEEEEecccCCeEEECCEEeecCCCcEEEEecCCCEE
Confidence 999999987778888764 388899999987543 246899988754 788999999875 589999987667889
Q ss_pred EEeeEEcC--------------CceeEEeecCCCCCcccEEeEEEEcEEEeCC-ceeEEEEeeCCCCceEEeEEEEeEEE
Q 017991 265 IRNFACGP--------------GHGISIGSLGKSNSSVRIHDIMVYGALISNT-QNGVRIKTWQGGSGSATNIQFLDVLM 329 (362)
Q Consensus 265 i~n~~~~~--------------~~gi~igs~g~~~~~~~v~ni~i~n~~i~~~-~~gi~i~~~~g~~g~i~ni~~~ni~~ 329 (362)
|+||..+. +.|+.++... ...+.+++||...+. ..|+...... .+++++|+++
T Consensus 222 i~nn~a~~Ng~~~~~~n~~~gngnGf~lgg~~------~~~~~~v~nn~a~~N~~~G~~~n~~~------~~~~i~nNt~ 289 (400)
T 1ru4_A 222 IENSWAFRNGINYWNDSAFAGNGNGFKLGGNQ------AVGNHRITRSVAFGNVSKGFDQNNNA------GGVTVINNTS 289 (400)
T ss_dssp EESCEEESTTCCCSCCTTCCCCCCSEECCCTT------CCCCCEEESCEEESCSSEEEECTTCS------SCCEEESCEE
T ss_pred EEeEEEECCccccccccccccCCCCEEEeccC------CcCCEEEEeeEEECCcCcCEeecCCC------CCEEEECeEE
Confidence 99998742 3467776531 234556676666654 3455443211 1255555555
Q ss_pred ecCCccEEE
Q 017991 330 KNVSNPIII 338 (362)
Q Consensus 330 ~~~~~~i~i 338 (362)
.+....+.+
T Consensus 290 ~~N~~~~~~ 298 (400)
T 1ru4_A 290 YKNGINYGF 298 (400)
T ss_dssp ESSSEEEEE
T ss_pred ECCccceEE
Confidence 554434443
No 35
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=99.29 E-value=1.2e-10 Score=111.43 Aligned_cols=144 Identities=10% Similarity=0.118 Sum_probs=113.6
Q ss_pred EEEEEeecceEEEceEEeeCCCceeEEec-eeeEEEEeEEEECCCCCCCCCeeee--------cCccCEEEEeeEEec-C
Q 017991 181 AITFHKCKNLKVQNLRVVNSQQMHIAFTN-CLRVVISNLEVIAPAESPNTDGIHI--------SASRGVEVKNSIVGT-G 250 (362)
Q Consensus 181 ~i~~~~~~nv~I~~v~i~n~~~~~i~~~~-~~nv~i~n~~I~~~~~~~~~DGI~~--------~~s~nv~I~n~~i~~-g 250 (362)
.|.+..+++.+|++-++......+|++.. |++++|+++.+.. +.+|+.+ ..+++++|+++.+.. .
T Consensus 174 GI~~~~s~~~~i~~N~~~~~~~~GI~~~~~s~~v~I~nN~i~~-----~~~g~~~~~~g~~~~~~s~nv~i~~N~~~~n~ 248 (377)
T 2pyg_A 174 GFVADYLVDSVFENNVAYANDRHGFNVVTSTHDFVMTNNVAYG-----NGSSGLVVQRGLEDLALPSNILIDGGAYYDNA 248 (377)
T ss_dssp SEEEESEEEEEEESCEEESCSSCSEEEETTCEEEEEESCEEES-----CSSCSEEEECCSSCCCCCEEEEEESCEEESCS
T ss_pred ceeEeccCCcEEECcEEEccccCcEEEEeccCCeEEECCEEEC-----ccCceEEEeccccCCCCCccEEEECCEEEcCc
Confidence 57888899999999888877888999888 9999999999998 5677777 678899999999885 4
Q ss_pred CccEEEcCCceeEEEEeeEEcCC--ceeEEeecCCCCCcccEEeEEEEcEEEeCCce-----eEEEEeeCCCCce-----
Q 017991 251 DDCISIVGNSSLIRIRNFACGPG--HGISIGSLGKSNSSVRIHDIMVYGALISNTQN-----GVRIKTWQGGSGS----- 318 (362)
Q Consensus 251 dD~i~i~s~~~ni~i~n~~~~~~--~gi~igs~g~~~~~~~v~ni~i~n~~i~~~~~-----gi~i~~~~g~~g~----- 318 (362)
..++.+.. .++++|+||++.+. .|+.+.. .++++|+|++|.++.. .+.+....+.++.
T Consensus 249 ~~Gi~~~~-~~~v~i~~N~i~~~~~~GI~i~g---------~~~~~i~~N~i~~n~~~~~~~~v~~~~~~~~~~~~~~~~ 318 (377)
T 2pyg_A 249 REGVLLKM-TSDITLQNADIHGNGSSGVRVYG---------AQDVQILDNQIHDNAQAAAVPEVLLQSFDDTAGASGTYY 318 (377)
T ss_dssp SCSEEEEE-EEEEEEESCEEESCSSCSEEEEE---------EEEEEEESCEEESCCSSSSCCSEEEECEEETTSSSCEEE
T ss_pred cCceEecc-ccCeEEECCEEECCCCceEEEec---------CCCcEEECcEEECCcccccccceEEEEecCCCccceeee
Confidence 67888877 79999999999864 6888853 6899999999998654 2344433333221
Q ss_pred -EEeEEEEeEEEecCCc-cEEEE
Q 017991 319 -ATNIQFLDVLMKNVSN-PIIID 339 (362)
Q Consensus 319 -i~ni~~~ni~~~~~~~-~i~i~ 339 (362)
-++++++|+++++... +..|.
T Consensus 319 ~~~~~~i~~N~i~g~~~~~~~i~ 341 (377)
T 2pyg_A 319 TTLNTRIEGNTISGSANSTYGIQ 341 (377)
T ss_dssp CCBCCEEESCEEECCSSCCEEEE
T ss_pred eccCeEEECCEEECcCCCccceE
Confidence 3789999999999988 33333
No 36
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=99.28 E-value=1.4e-10 Score=113.97 Aligned_cols=206 Identities=11% Similarity=0.033 Sum_probs=111.8
Q ss_pred hHHHHHHHHHHHcCCCCCcEEEEcCCcEEEeeeeeccCC--CCCCceEEEE--e--EEECCCCCCCcCCCCccccEEEec
Q 017991 70 DTEAFANAWKKACSFPARTKIVFSAGYTFLIHPIDISGP--CKSRLTLEIS--G--TIVAPKDPDVWKGLNRRRWLYFNR 143 (362)
Q Consensus 70 dt~aiq~Ai~~a~~~~gg~~v~~P~G~~Y~i~~l~l~~~--~~s~v~l~~~--G--~i~~~~~~~~~~~~~~~~~i~~~~ 143 (362)
+.+.||+||+. ++. |.+|++++| +|.-..+.+.+. ..+.++|..+ + +|... ..+.+.+
T Consensus 30 ~~~~Lq~Ai~~-A~p--GDtI~L~~G-tY~~~~i~i~~sGt~~~pItl~~~~~~~~vi~G~------------~~l~i~g 93 (506)
T 1dbg_A 30 SNETLYQVVKE-VKP--GGLVQIADG-TYKDVQLIVSNSGKSGLPITIKALNPGKVFFTGD------------AKVELRG 93 (506)
T ss_dssp SHHHHHHHHHH-CCT--TCEEEECSE-EEETCEEEECCCCBTTBCEEEEESSTTSEEEEES------------CEEEECS
T ss_pred CHHHHHHHHHh-CCC--CCEEEECCC-EEecceEEEecCCcCCCCEEEECCCCCccEEeCC------------ceEEEEc
Confidence 35679999994 443 799999999 997545554211 1223444432 1 11110 1133332
Q ss_pred eeeEEEEeccEEecCCCeeeecccccCCCCCCCCCCeEEEEEeecceEEEceEEeeCCCc-eeEEe--------ceeeEE
Q 017991 144 VNHLTVQGGGTINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKVQNLRVVNSQQM-HIAFT--------NCLRVV 214 (362)
Q Consensus 144 ~~ni~I~G~G~idG~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~nv~I~~v~i~n~~~~-~i~~~--------~~~nv~ 214 (362)
++++|+| -+|.+.+..... . . ...+..+.+. .++++|+++.|.+...- .+.+. ..++.+
T Consensus 94 -~~v~i~G-L~i~~~~~~~~~-~-----~---~~~~~~iav~-G~~~~I~nn~I~~~~~gd~i~i~~~~~~~~l~g~~n~ 161 (506)
T 1dbg_A 94 -EHLILEG-IWFKDGNRAIQA-W-----K---SHGPGLVAIY-GSYNRITACVFDCFDEANSAYITTSLTEDGKVPQHCR 161 (506)
T ss_dssp -SSEEEES-CEEEEECCCTTT-C-----C---TTSCCSEEEC-SSSCEEESCEEESCCSSCSCSEEECCCTTCCCCCSCE
T ss_pred -CCEEEEC-eEEECCCcceee-e-----e---cccccceEEe-cCCeEEEeeEEEcCCCCceeeEeecccceeeeccccE
Confidence 5566666 233332210000 0 0 0112234444 58899999999976331 02232 566778
Q ss_pred EEeEEEECCCCCCCCC----eeeecC-------ccCEEEEeeEEecC------CccEEEcC---CceeEEEEeeEEcCCc
Q 017991 215 ISNLEVIAPAESPNTD----GIHISA-------SRGVEVKNSIVGTG------DDCISIVG---NSSLIRIRNFACGPGH 274 (362)
Q Consensus 215 i~n~~I~~~~~~~~~D----GI~~~~-------s~nv~I~n~~i~~g------dD~i~i~s---~~~ni~i~n~~~~~~~ 274 (362)
|+++.|.+..+..... ||+++. +.+.+|++++|... -+.+.++. .+.+.+|+|+.|..+.
T Consensus 162 I~~N~I~Gk~~~G~~i~gnngI~l~~~~~~~~~~~~~~I~nN~f~~~~~~~N~~e~iR~G~h~m~s~~~~VenN~f~~~~ 241 (506)
T 1dbg_A 162 IDHCSFTDKITFDQVINLNNTARAIKDGSVGGPGMYHRVDHCFFSNPQKPGNAGGGIRIGYYRNDIGRCLVDSNLFMRQD 241 (506)
T ss_dssp EESCEEECCCSSSCSEEECSSCCCSCCCSCCCCCCCCEEESCEEEECCCSSSCCCSEEECSSTTCBCCCEEESCEEEEEC
T ss_pred EECcEEECCcCcceEEecCceeEeccCcccccccCCeEEeCcEEcccccCCCccccEEEEEEecccCCcEEECCEEEecc
Confidence 9999999854433333 888876 35889999999853 34555553 2467788888776543
Q ss_pred -eeEEeecCCCCCcccEEeEEEEcEEEeCCceeEEEE
Q 017991 275 -GISIGSLGKSNSSVRIHDIMVYGALISNTQNGVRIK 310 (362)
Q Consensus 275 -gi~igs~g~~~~~~~v~ni~i~n~~i~~~~~gi~i~ 310 (362)
|..+-+. .-.+.+|+++++.++..+|.++
T Consensus 242 gg~aim~s-------kS~~n~i~~N~~~~~~ggi~l~ 271 (506)
T 1dbg_A 242 SEAEIITS-------KSQENVYYGNTYLNCQGTMNFR 271 (506)
T ss_dssp SSSEEEEE-------ESBSCEEESCEEESCSSEEEEE
T ss_pred CcEEEEEE-------ecCCEEEECCEEEcccCcEEEe
Confidence 2222110 0013466666666655555444
No 37
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=99.28 E-value=3.1e-10 Score=114.22 Aligned_cols=116 Identities=19% Similarity=0.132 Sum_probs=88.3
Q ss_pred eeeEEEEeEEEECCCCCCCCCeeeecCccCEEEEeeEEecC-----CccEEEcCCceeEEEEeeEEcCC-ceeEEeecCC
Q 017991 210 CLRVVISNLEVIAPAESPNTDGIHISASRGVEVKNSIVGTG-----DDCISIVGNSSLIRIRNFACGPG-HGISIGSLGK 283 (362)
Q Consensus 210 ~~nv~i~n~~I~~~~~~~~~DGI~~~~s~nv~I~n~~i~~g-----dD~i~i~s~~~ni~i~n~~~~~~-~gi~igs~g~ 283 (362)
|+||+|+||+|.+ ...|||.+.+|+||+|+||++... ..++.+.++++||+|+||++.++ .|+.|.+.
T Consensus 182 S~NV~I~Nc~I~n----tGDDcIAIksSeNI~I~Nc~c~gphG~S~~~GIsIGsgs~NVtV~Nc~~~nT~nGIRIKt~-- 255 (772)
T 3gqn_A 182 SENIWIENCEATG----FGDDGITTHHSQYINILNCYSHDPRLTANCNGFEIDDGSRHVVLSNNRSKGCYGGIEIKAH-- 255 (772)
T ss_dssp CEEEEEESCEEES----CSSCSEEECSCEEEEEESCEEECCSSSSSCCSEEECTTCEEEEEEEEEEESSSEEEEECCC--
T ss_pred cceEEEEeeEEEe----cCcCeEEecCCceEEEEeEEEECCCCCCCcccEEecCCcccEEEEceEEECCCcEEEEEEe--
Confidence 9999999999976 367999999999999999999544 57899999889999999999876 58999874
Q ss_pred CCCcccEEeEEEEcEEEeCCce--eEEEEeeC----CCCceEEeEEEEeEEEecC
Q 017991 284 SNSSVRIHDIMVYGALISNTQN--GVRIKTWQ----GGSGSATNIQFLDVLMKNV 332 (362)
Q Consensus 284 ~~~~~~v~ni~i~n~~i~~~~~--gi~i~~~~----g~~g~i~ni~~~ni~~~~~ 332 (362)
.....++||+|.|+......+ +++..-.. ..+-...||++.|++....
T Consensus 256 -~~gg~v~NV~I~gnis~~dvrsynir~iG~h~a~dp~s~~a~nV~l~n~~~~~P 309 (772)
T 3gqn_A 256 -GDAPAAYNISINGHMSVEDVRSYNFRHIGHHAATAPQSVSAKNIVASNLVSIRP 309 (772)
T ss_dssp -TTSCCCEEEEEEEEEEESCSEEEEECCTTSCSSSSCCCSSCEEEEEEEEEEESC
T ss_pred -CCCCccccEEEECCEEeccCeEecceEEccccCCCCCCccCccEEeecceEEcc
Confidence 345679999999766554322 44422111 0112678888888887654
No 38
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=99.27 E-value=3.2e-11 Score=121.37 Aligned_cols=92 Identities=24% Similarity=0.354 Sum_probs=69.6
Q ss_pred CCCeeEEeeeccccCCCCcchHHHHHHHHHHHcCCCCCcEEEEcCCcEEEe-eeeeccCCCCCCceEEEEe--EEECCCC
Q 017991 50 KSKRVIFVGDFGAKGDGFNDDTEAFANAWKKACSFPARTKIVFSAGYTFLI-HPIDISGPCKSRLTLEISG--TIVAPKD 126 (362)
Q Consensus 50 ~~~~~~~v~~~Ga~~dg~~ddt~aiq~Ai~~a~~~~gg~~v~~P~G~~Y~i-~~l~l~~~~~s~v~l~~~G--~i~~~~~ 126 (362)
+....++|++|||+|||++|||+|||+||+++ + ++.+||||+| +|++ .+|.+ +++++|.+++ +|....
T Consensus 396 ~~~~~vnVkd~GA~GDG~tDDT~Ai~~al~aa-~--~g~~v~~P~G-~Y~vt~Ti~i----p~~~~ivG~~~~~I~~~G- 466 (758)
T 3eqn_A 396 APSDFVSVRSQGAKGDGHTDDTQAIKNVFAKY-A--GCKIIFFDAG-TYIVTDTIQI----PAGTQIVGEVWSVIMGTG- 466 (758)
T ss_dssp CGGGEEETTTTTCCCEEEEECHHHHHHHHHHH-T--TTSEEECCSE-EEEESSCEEE----CTTCEEECCSSEEEEECS-
T ss_pred cccceEEeeeccccCCCCchhHHHHHHHHHHh-c--CCCEEEECCC-EeEECCeEEc----CCCCEEEecccceEecCC-
Confidence 45679999999999999999999999999943 3 2789999999 9999 58999 8999998885 555432
Q ss_pred CCCcCC-CCccccEEE---eceeeEEEEe
Q 017991 127 PDVWKG-LNRRRWLYF---NRVNHLTVQG 151 (362)
Q Consensus 127 ~~~~~~-~~~~~~i~~---~~~~ni~I~G 151 (362)
..|++ .++++++.. .+...+.|.|
T Consensus 467 -~~F~d~~~P~pvv~VG~~gd~G~veisd 494 (758)
T 3eqn_A 467 -SKFTDYNNPQPVIQVGAPGSSGVVEITD 494 (758)
T ss_dssp -GGGCCTTSCEEEEEESCTTCBSCEEEES
T ss_pred -ccccCCCCCeeeEEeCCCCCCCeEEEEe
Confidence 33433 234556655 3344666666
No 39
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=99.24 E-value=3.4e-10 Score=110.12 Aligned_cols=132 Identities=17% Similarity=0.073 Sum_probs=100.0
Q ss_pred EeecceEEEce----EEeeCC-----CceeEEeceeeEEEEeEEEECCCCCCCCCeeeecCccCEEEEeeEEecCCccEE
Q 017991 185 HKCKNLKVQNL----RVVNSQ-----QMHIAFTNCLRVVISNLEVIAPAESPNTDGIHISASRGVEVKNSIVGTGDDCIS 255 (362)
Q Consensus 185 ~~~~nv~I~~v----~i~n~~-----~~~i~~~~~~nv~i~n~~I~~~~~~~~~DGI~~~~s~nv~I~n~~i~~gdD~i~ 255 (362)
.+.+|++|.+- ++.... ...+.+..|+|++|+|+++.+.. + +..+.+|.+. ..|++.
T Consensus 106 ~~~~nItI~G~Gg~~~iDG~G~~~~rp~~i~~~~~~Nv~I~gIti~n~w----~----ih~s~~V~i~------NtDGi~ 171 (464)
T 1h80_A 106 NIVRNFSFQGLGNGFLVDFKDSRDKNLAVFKLGDVRNYKISNFTIDDNK----T----IFASILVDVT------ERNGRL 171 (464)
T ss_dssp SCEEEEEEEECTTCEEEECTTCSCCBEEEEEECSEEEEEEEEEEEECCS----C----BSCSEEECEE------EETTEE
T ss_pred cCccceEEECcCcceEEeCCCCCCCCceEEEEEeeccEEEeeeEEeccc----e----Eeeceeeeee------cCCCce
Confidence 45777888775 333221 12467889999999999999721 1 3344444443 356777
Q ss_pred EcCCceeEEEEeeEEcCCc-eeEEeecCCCCCcccEEeEEEEcEEEeCCceeEEEEee-----CCCCceEEeEEEEeEEE
Q 017991 256 IVGNSSLIRIRNFACGPGH-GISIGSLGKSNSSVRIHDIMVYGALISNTQNGVRIKTW-----QGGSGSATNIQFLDVLM 329 (362)
Q Consensus 256 i~s~~~ni~i~n~~~~~~~-gi~igs~g~~~~~~~v~ni~i~n~~i~~~~~gi~i~~~-----~g~~g~i~ni~~~ni~~ 329 (362)
+ .++||+|+||++..++ ++ |+ .....++||+|+||++.+ ..||+|+++ .+..|.++||+|+|++|
T Consensus 172 i--~s~nV~I~n~~I~~gddgi--Gs----~~~~~~~NV~V~n~~~~g-g~GIrIktg~d~IG~~~~g~v~NI~~~Ni~~ 242 (464)
T 1h80_A 172 H--WSRNGIIERIKQNNALFGY--GL----IQTYGADNILFRNLHSEG-GIALRMETDNLLMKNYKQGGIRNIFADNIRC 242 (464)
T ss_dssp E--EEEEEEEEEEEEESCCTTC--EE----EEESEEEEEEEEEEEEES-SEEEEEECCCHHHHHHTCCEEEEEEEEEEEE
T ss_pred e--eccCEEEeceEEecCCCeE--Ee----cccCCEeEEEEEeeEEEC-CCEEEEEeCCceeccCCCCcEEEEEEEeEEE
Confidence 6 5799999999999876 45 32 134578999999999999 889999998 55668999999999999
Q ss_pred ecCCccEEEE
Q 017991 330 KNVSNPIIID 339 (362)
Q Consensus 330 ~~~~~~i~i~ 339 (362)
+++.+||.|+
T Consensus 243 ~nv~~~I~I~ 252 (464)
T 1h80_A 243 SKGLAAVMFG 252 (464)
T ss_dssp ESSSEEEEEE
T ss_pred ECCceeEEEe
Confidence 9999999998
No 40
>2x6w_A Tail spike protein; viral protein, beta-helix, hydrolase; HET: RAM GLC GLA NAG NDG; 1.35A {Enterobacteria phage HK620} PDB: 2vji_A 2vjj_A* 2x85_A* 2x6x_A* 2x6y_A*
Probab=99.15 E-value=3.1e-10 Score=111.88 Aligned_cols=176 Identities=13% Similarity=-0.013 Sum_probs=122.3
Q ss_pred CCCceEEEEeEEECCCCCCCcCCCC---ccccEEEeceeeEEEEeccEEecCCCeeeecccccCCCCCCCCCCeEEEE--
Q 017991 110 KSRLTLEISGTIVAPKDPDVWKGLN---RRRWLYFNRVNHLTVQGGGTINGMGQEWWSRSCKINTTNPCRHAPTAITF-- 184 (362)
Q Consensus 110 ~s~v~l~~~G~i~~~~~~~~~~~~~---~~~~i~~~~~~ni~I~G~G~idG~G~~~~~~~~~~~~~~~~~~~~~~i~~-- 184 (362)
.++++|.+.|+|.+.-. ..|+... .++.+.+.+++ |+|.-..+. ...|. +.+
T Consensus 149 ~~NItItG~GtIDGqG~-~wW~~~~~~~~RP~l~f~~c~---I~GITi~NS--DP~w~-----------------I~iG~ 205 (600)
T 2x6w_A 149 LENCHIYGHGVVDFGGY-EFGASSQLRNGVAFGRSYNCS---VTGITFQNG--DVTWA-----------------ITLGW 205 (600)
T ss_dssp EEEEEEESSCEEECTTC-CCSSTTCCEEEEECCSEEEEE---EESCEEESC--CCSCS-----------------EEECB
T ss_pred ceeEEEecceeeeCCcc-ccccccccCCCCCEEEEeeeE---EeCeEEECC--CCccE-----------------EEeCC
Confidence 35667777788876432 2343211 12335555554 677333332 12343 788
Q ss_pred -EeecceEEEceE----EeeCC-CceeEEeceeeEEEEeEEEECCCCCCCCCeeee-cCcc--CEEEEeeEEecCCccEE
Q 017991 185 -HKCKNLKVQNLR----VVNSQ-QMHIAFTNCLRVVISNLEVIAPAESPNTDGIHI-SASR--GVEVKNSIVGTGDDCIS 255 (362)
Q Consensus 185 -~~~~nv~I~~v~----i~n~~-~~~i~~~~~~nv~i~n~~I~~~~~~~~~DGI~~-~~s~--nv~I~n~~i~~gdD~i~ 255 (362)
..|+||+|++++ +.+++ ..+| |+|+||.|.+ .+|+|.+ .+.+ ++.++ .+..++.+|+
T Consensus 206 ~~~c~NVtI~nvtfi~aI~sspNTDGI-------V~I~nc~I~t-----GDDCIAI~KSGs~~ni~~e--~~~~GHgGIS 271 (600)
T 2x6w_A 206 NGYGSNCYVRKCRFINLVNSSVNADHS-------TVYVNCPYSG-----VESCYFSMSSSFARNIACS--VQLHQHDTFY 271 (600)
T ss_dssp TTBEEEEEEESCEEECCCCCSSCCCEE-------EEEECSSSEE-----EESCEEECCCTTHHHHEEE--EEECSSSEEE
T ss_pred CCCcccEEEeCeEEcceEecCCCCCEE-------EEEEeeEEec-----CCcEEEEecCCCcCCeEEE--EEcCCCCcEE
Confidence 899999999999 77633 2344 8999999987 6799999 7644 46777 5667888999
Q ss_pred EcC----CceeEEEEeeEEcCCceeEEeecCCCCCcccEEeEEEEcEEEeCCceeEEEEeeC--CCCceEEeEEEEeEEE
Q 017991 256 IVG----NSSLIRIRNFACGPGHGISIGSLGKSNSSVRIHDIMVYGALISNTQNGVRIKTWQ--GGSGSATNIQFLDVLM 329 (362)
Q Consensus 256 i~s----~~~ni~i~n~~~~~~~gi~igs~g~~~~~~~v~ni~i~n~~i~~~~~gi~i~~~~--g~~g~i~ni~~~ni~~ 329 (362)
+++ +.+||+|+| ++.... ...+.++||+|+|++|.+...++.+...+ ...+.|+||+|+||+.
T Consensus 272 IGSe~~ggV~NV~V~N-rIKt~~----------G~GG~V~NItfeNI~m~nV~~~I~i~q~~~~~s~~~IsnItfkNItg 340 (600)
T 2x6w_A 272 RGSTVNGYCRGAYVVM-HAAEAA----------GAGSYAYNMQVENNIAVIYGQFVILGSDVTATVSGHLNDVIVSGNIV 340 (600)
T ss_dssp ESCEEEEESEEEEEEE-CGGGCT----------TTCSEEEEEEEESCEEEESSEEEEEEECBCSSCBCEEEEEEEESCEE
T ss_pred ecccccCcEEEEEEEE-EEEeec----------CCCceEEEEEEEEEEEEccceEEEeCCCCCCCCCceEEEEEEEeEEE
Confidence 987 368888888 443322 13468999999999999998888886542 2346999999999999
Q ss_pred ecCC
Q 017991 330 KNVS 333 (362)
Q Consensus 330 ~~~~ 333 (362)
+...
T Consensus 341 Tsas 344 (600)
T 2x6w_A 341 SIGE 344 (600)
T ss_dssp EECS
T ss_pred Eecc
Confidence 8754
No 41
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=98.80 E-value=7.4e-08 Score=90.37 Aligned_cols=112 Identities=11% Similarity=0.074 Sum_probs=61.3
Q ss_pred EEEEEeecceEEEceEEeeCC-CceeEE-eceeeEEEEeEEEECCCCCCCCCeeeecCccCEEEEeeEEecCCccE-EEc
Q 017991 181 AITFHKCKNLKVQNLRVVNSQ-QMHIAF-TNCLRVVISNLEVIAPAESPNTDGIHISASRGVEVKNSIVGTGDDCI-SIV 257 (362)
Q Consensus 181 ~i~~~~~~nv~I~~v~i~n~~-~~~i~~-~~~~nv~i~n~~I~~~~~~~~~DGI~~~~s~nv~I~n~~i~~gdD~i-~i~ 257 (362)
.|.+..++||.|++++|++.. .+.-.+ ..... . .+ -. .....|||.+.++++|.|++|.+..+.|++ .++
T Consensus 107 gi~i~~a~NVIIrnl~i~~~~~~~~~~I~~~~~~-~-~g--~~---~~~~~DaI~i~~s~nVwIDHcs~s~~~Dg~id~~ 179 (346)
T 1pxz_A 107 CLFMRKVSHVILHSLHIHGCNTSVLGDVLVSESI-G-VE--PV---HAQDGDAITMRNVTNAWIDHNSLSDCSDGLIDVT 179 (346)
T ss_dssp CEEEESCEEEEEESCEEECCCCCCSEEEEEETTT-E-EE--EE---CCCCCCSEEEESCEEEEEESCEEECCSSEEEEEE
T ss_pred eEEEEccCCEEEEeeEEEeeccCCCceEEeccCc-c-cc--cc---cCCCCCEEEEecCceEEEEeeEEecCCCCcEeec
Confidence 366778889999999998752 110000 00000 0 00 00 123567777777777777777777766655 455
Q ss_pred CCceeEEEEeeEEcCCc-eeEEeecCCCCCcccEEeEEEEcEEE
Q 017991 258 GNSSLIRIRNFACGPGH-GISIGSLGKSNSSVRIHDIMVYGALI 300 (362)
Q Consensus 258 s~~~ni~i~n~~~~~~~-gi~igs~g~~~~~~~v~ni~i~n~~i 300 (362)
.++++|+|+||+|..-. ++-+|+.-. .......+|++++|.+
T Consensus 180 ~~s~~vTISnn~f~~H~k~~l~G~sd~-~~~d~~~~vT~~~N~f 222 (346)
T 1pxz_A 180 LGSTGITISNNHFFNHHKVMLLGHDDT-YDDDKSMKVTVAFNQF 222 (346)
T ss_dssp SSCEEEEEESCEEESEEEEEEESCCSS-CGGGGGCEEEEESCEE
T ss_pred cCcceEEEEeeEEecCCceeEECCCCc-cccCCceEEEEEeeEE
Confidence 55777777777776422 455554210 0111224666777766
No 42
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=98.80 E-value=1.1e-06 Score=81.81 Aligned_cols=71 Identities=14% Similarity=0.159 Sum_probs=35.6
Q ss_pred EEEEeecceEEEceEEeeCCC---ceeEEeceeeEEEEeEEEECCCCCCCCCeeeecCccCEEEEeeEEecC-CccEEEc
Q 017991 182 ITFHKCKNLKVQNLRVVNSQQ---MHIAFTNCLRVVISNLEVIAPAESPNTDGIHISASRGVEVKNSIVGTG-DDCISIV 257 (362)
Q Consensus 182 i~~~~~~nv~I~~v~i~n~~~---~~i~~~~~~nv~i~n~~I~~~~~~~~~DGI~~~~s~nv~I~n~~i~~g-dD~i~i~ 257 (362)
|.+..++||.|++++|++... | .......|+|.+..++||.|++|.+..+ |..+.+.
T Consensus 85 i~I~~a~NVIIrnl~i~~~~~~~~~-------------------~~~~~~~DaI~i~~s~nVWIDHcs~s~~~Dg~idi~ 145 (340)
T 3zsc_A 85 LVIKDAQNVIIRNIHFEGFYMEDDP-------------------RGKKYDFDYINVENSHHIWIDHITFVNGNDGAVDIK 145 (340)
T ss_dssp EEEESCEEEEEESCEEECCCCTTCT-------------------TSCSSCCCSEEEESCEEEEEESCEEESCSSCSEEEE
T ss_pred eEEEcCceEEEeCeEEECCccccCc-------------------cCCcCCCCeEEEecCCcEEEEeeeeccCCccceEEe
Confidence 555667777777777776420 0 0001134555555555555555555443 3334444
Q ss_pred CCceeEEEEeeEEc
Q 017991 258 GNSSLIRIRNFACG 271 (362)
Q Consensus 258 s~~~ni~i~n~~~~ 271 (362)
.++.+|+|+||.|.
T Consensus 146 ~~s~~vTISnn~f~ 159 (340)
T 3zsc_A 146 KYSNYITVSWNKFV 159 (340)
T ss_dssp TTCEEEEEESCEEE
T ss_pred cCCceEEEECcEec
Confidence 44455555555554
No 43
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=98.77 E-value=3e-07 Score=86.51 Aligned_cols=134 Identities=15% Similarity=0.176 Sum_probs=78.6
Q ss_pred EEEE-eecceEEEceEEeeC------CCceeEEeceeeEEEEeEEEECCCCCCCCCeee---ecCccCEEEEeeEEecCC
Q 017991 182 ITFH-KCKNLKVQNLRVVNS------QQMHIAFTNCLRVVISNLEVIAPAESPNTDGIH---ISASRGVEVKNSIVGTGD 251 (362)
Q Consensus 182 i~~~-~~~nv~I~~v~i~n~------~~~~i~~~~~~nv~i~n~~I~~~~~~~~~DGI~---~~~s~nv~I~n~~i~~gd 251 (362)
|.+. .++||.|++++|++. ...+|.+..+++|.|++|++... .|+.. ...+++|||++|.|...+
T Consensus 126 l~i~~~a~NVIIrnL~i~~~~~~~~~g~DaI~i~~s~nVwIDHcs~s~~-----~d~~~~~g~~~s~~VTISnn~f~~~~ 200 (359)
T 1idk_A 126 LRIVSGAENIIIQNIAVTDINPKYVWGGDAITLDDCDLVWIDHVTTARI-----GRQHYVLGTSADNRVSLTNNYIDGVS 200 (359)
T ss_dssp EEECTTCEEEEEESCEEEEECTTEETSCCSEEECSCEEEEEESCEEEEE-----SSCSEEECCCTTCEEEEESCEEECBC
T ss_pred EEEecCCCcEEEeCeEEEcccccccccCCceeecCCCcEEEEeeEeecC-----CCCcEEecccCcceEEEECcEecCCc
Confidence 6666 688888888888873 22456666777777777777652 23332 345667777777776322
Q ss_pred ---------c--cEEEcCCceeEEEEeeEEcCCceeEEeecCCCCCcccE---EeEEEEcEEEeCC-ceeEEEEeeCCCC
Q 017991 252 ---------D--CISIVGNSSLIRIRNFACGPGHGISIGSLGKSNSSVRI---HDIMVYGALISNT-QNGVRIKTWQGGS 316 (362)
Q Consensus 252 ---------D--~i~i~s~~~ni~i~n~~~~~~~gi~igs~g~~~~~~~v---~ni~i~n~~i~~~-~~gi~i~~~~g~~ 316 (362)
+ ...+...+++|++.+|.|....+ +...+ +.+++.||.+.+. .+++.+. .
T Consensus 201 ~~s~~~~G~h~~~~~L~G~sd~vT~hhN~f~~~~~----------R~Pr~r~g~~~hv~NN~~~n~~~~~i~~~--~--- 265 (359)
T 1idk_A 201 DYSATCDGYHYWAIYLDGDADLVTMKGNYIYHTSG----------RSPKVQDNTLLHAVNNYWYDISGHAFEIG--E--- 265 (359)
T ss_dssp SCBTTSSSBBSCCEEECCSSCEEEEESCEEESBCS----------CTTEECTTCEEEEESCEEEEEEEEEEEEC--T---
T ss_pred ccccccCccccceEEEEecCCCeEEEceEeecCcc----------cCccccCCceEEEECCEEecccceEEecc--C---
Confidence 1 22333334577777777653210 11111 2467777777663 2444432 1
Q ss_pred ceEEeEEEEeEEEecCCccEE
Q 017991 317 GSATNIQFLDVLMKNVSNPII 337 (362)
Q Consensus 317 g~i~ni~~~ni~~~~~~~~i~ 337 (362)
-..|.+||+.+++.+.|+.
T Consensus 266 --~~~i~~e~N~F~~~~~p~~ 284 (359)
T 1idk_A 266 --GGYVLAEGNVFQNVDTVLE 284 (359)
T ss_dssp --TCEEEEESCEEEEEEEEEE
T ss_pred --CcEEEEEccEEECCCCcee
Confidence 2367888888888877875
No 44
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=98.76 E-value=5e-07 Score=84.91 Aligned_cols=20 Identities=20% Similarity=0.376 Sum_probs=15.2
Q ss_pred EEEEEeecceEEEceEEeeC
Q 017991 181 AITFHKCKNLKVQNLRVVNS 200 (362)
Q Consensus 181 ~i~~~~~~nv~I~~v~i~n~ 200 (362)
.|.+..++||.|++++|++.
T Consensus 97 gl~i~~~~NVIIrnl~i~~~ 116 (355)
T 1pcl_A 97 SLVIKGVKNVILRNLYIETP 116 (355)
T ss_pred EEEEecCCeEEEeeeEEEcC
Confidence 36667788888888888853
No 45
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=98.74 E-value=3.9e-07 Score=85.81 Aligned_cols=134 Identities=13% Similarity=0.122 Sum_probs=74.2
Q ss_pred EEEE-eecceEEEceEEeeCC------CceeEEeceeeEEEEeEEEECCCCCCCCCeee---ecCccCEEEEeeEEecCC
Q 017991 182 ITFH-KCKNLKVQNLRVVNSQ------QMHIAFTNCLRVVISNLEVIAPAESPNTDGIH---ISASRGVEVKNSIVGTGD 251 (362)
Q Consensus 182 i~~~-~~~nv~I~~v~i~n~~------~~~i~~~~~~nv~i~n~~I~~~~~~~~~DGI~---~~~s~nv~I~n~~i~~gd 251 (362)
|.+. .++||.|++++|++.. ..+|.+..+++|.|++|++.. ..|+.. ...+++|||++|+|....
T Consensus 126 l~i~~~a~NVIIrnl~i~~~~~~~~~~~DaI~i~~s~nvwIDHcs~s~-----~~d~~~~~~~~~s~~vTISnn~f~~~~ 200 (359)
T 1qcx_A 126 LRVVSGAKNVIIQNIAVTDINPKYVWGGDAITVDDSDLVWIDHVTTAR-----IGRQHIVLGTSADNRVTISYSLIDGRS 200 (359)
T ss_dssp EEEETTCCCEEEESCEEEEECTTEETSCCSEEEESCCCEEEESCEEEE-----ESSCSEEECSSCCEEEEEESCEEECBC
T ss_pred EEEecCCCCEEEeCcEEEecCCcccccCceeEecCCceEEEEeeEeec-----cCcCceeecccccccEEEECcEecCCc
Confidence 6666 7888888988888742 234566666666666666664 223321 224566666666665321
Q ss_pred -----------ccEEEcCCceeEEEEeeEEcCCceeEEeecCCCCCcccE---EeEEEEcEEEeCC-ceeEEEEeeCCCC
Q 017991 252 -----------DCISIVGNSSLIRIRNFACGPGHGISIGSLGKSNSSVRI---HDIMVYGALISNT-QNGVRIKTWQGGS 316 (362)
Q Consensus 252 -----------D~i~i~s~~~ni~i~n~~~~~~~gi~igs~g~~~~~~~v---~ni~i~n~~i~~~-~~gi~i~~~~g~~ 316 (362)
....+...+.++++.+|.+....+ +...+ ..+++.||.+.+. .+++...
T Consensus 201 ~~s~~~~G~H~~~~~l~G~sd~vT~~~N~f~~~~~----------R~Pr~r~~~~~hv~NN~~~n~~~~a~~~~------ 264 (359)
T 1qcx_A 201 DYSATCNGHHYWGVYLDGSNDMVTLKGNYFYNLSG----------RMPKVQGNTLLHAVNNLFHNFDGHAFEIG------ 264 (359)
T ss_dssp SSBTTSSSBBSCCEEECCSSEEEEEESCEEESBCS----------CTTEECSSEEEEEESCEEEEEEEEEEEEC------
T ss_pred cccccCcccccceeEEecCCCCeehcccEeccCcc----------cCceecCCceEEEEccEEECccCeEEecC------
Confidence 122232224566666666542210 01111 2466777776653 2333321
Q ss_pred ceEEeEEEEeEEEecCCccEE
Q 017991 317 GSATNIQFLDVLMKNVSNPII 337 (362)
Q Consensus 317 g~i~ni~~~ni~~~~~~~~i~ 337 (362)
.-..|.+||+.+++..+|+.
T Consensus 265 -~~~~i~~e~N~F~~~~~~~~ 284 (359)
T 1qcx_A 265 -TGGYVLAEGNVFQDVNVVVE 284 (359)
T ss_dssp -TTEEEEEESCEEEEEEEEEC
T ss_pred -CCceEEEEeeEEECCCcccC
Confidence 22467888888888777764
No 46
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=98.61 E-value=5.2e-07 Score=83.61 Aligned_cols=140 Identities=11% Similarity=0.160 Sum_probs=90.5
Q ss_pred EEEEEeecceEEEceEEeeCCC------ceeEEeceeeEEEEeEEEECCCCCCCCCeeeecCccCEEEEeeEEecCCccE
Q 017991 181 AITFHKCKNLKVQNLRVVNSQQ------MHIAFTNCLRVVISNLEVIAPAESPNTDGIHISASRGVEVKNSIVGTGDDCI 254 (362)
Q Consensus 181 ~i~~~~~~nv~I~~v~i~n~~~------~~i~~~~~~nv~i~n~~I~~~~~~~~~DGI~~~~s~nv~I~n~~i~~gdD~i 254 (362)
.+.+ .+++++++|++|+|... -.+.+ .++++.+.+|+|.+ ..|++.....+ ..+++|+|...-|-|
T Consensus 88 tv~v-~a~~f~~~nlt~~Nt~g~~~~qAvAl~v-~~d~~~f~~c~f~g-----~QDTLy~~~~r-~~~~~c~I~G~vDFI 159 (319)
T 1gq8_A 88 TVAA-VGAGFLARDITFQNTAGAAKHQAVALRV-GSDLSAFYRCDILA-----YQDSLYVHSNR-QFFINCFIAGTVDFI 159 (319)
T ss_dssp SEEE-CSTTCEEEEEEEEECCCGGGCCCCSEEE-CCTTEEEEEEEEEC-----STTCEEECSSE-EEEESCEEEESSSCE
T ss_pred EEEE-ECCCEEEEEeEeEccCCCcCCceEEEEe-cCCcEEEEEeEECc-----cceeeeecCcc-EEEEecEEEeeeeEE
Confidence 3555 48999999999999642 23444 68899999999998 67888888765 599999999766655
Q ss_pred EEcCCceeEEEEeeEEcC-----CceeEEeecCCCCCcccEEeEEEEcEEEeCCceeE----EEEeeCCCC-ceEEeEEE
Q 017991 255 SIVGNSSLIRIRNFACGP-----GHGISIGSLGKSNSSVRIHDIMVYGALISNTQNGV----RIKTWQGGS-GSATNIQF 324 (362)
Q Consensus 255 ~i~s~~~ni~i~n~~~~~-----~~gi~igs~g~~~~~~~v~ni~i~n~~i~~~~~gi----~i~~~~g~~-g~i~ni~~ 324 (362)
. +. ....++||++.. +..-.|-.-++ .....-....|.||+|.+..... ..++.-|++ +.-..++|
T Consensus 160 f-G~--~~a~f~~c~i~~~~~~~~~~~~itA~~r-~~~~~~~G~vf~~c~i~~~~~~~~~~~~~~~yLGRpW~~~sr~v~ 235 (319)
T 1gq8_A 160 F-GN--AAVVLQDCDIHARRPGSGQKNMVTAQGR-TDPNQNTGIVIQKSRIGATSDLQPVQSSFPTYLGRPWKEYSRTVV 235 (319)
T ss_dssp E-ES--CEEEEESCEEEECCCSTTCCEEEEEECC-CSTTCCCEEEEESCEEEECTTTGGGGGGSCEEEECCSSTTCEEEE
T ss_pred e-cC--CcEEEEeeEEEEecCCCCCceEEEeCCC-CCCCCCceEEEECCEEecCCCccccccceeEEecccCCCcceEEE
Confidence 3 33 358999998752 11112222121 12334567899999998653210 001112222 22346889
Q ss_pred EeEEEecC
Q 017991 325 LDVLMKNV 332 (362)
Q Consensus 325 ~ni~~~~~ 332 (362)
.|..|.+.
T Consensus 236 ~~t~~~~~ 243 (319)
T 1gq8_A 236 MQSSITNV 243 (319)
T ss_dssp ESCEECTT
T ss_pred EeccCCCc
Confidence 99998775
No 47
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=98.59 E-value=4.8e-07 Score=83.79 Aligned_cols=140 Identities=11% Similarity=0.087 Sum_probs=90.1
Q ss_pred EEEEEeecceEEEceEEeeCCC------ceeEEeceeeEEEEeEEEECCCCCCCCCeeeecCccCEEEEeeEEecCCccE
Q 017991 181 AITFHKCKNLKVQNLRVVNSQQ------MHIAFTNCLRVVISNLEVIAPAESPNTDGIHISASRGVEVKNSIVGTGDDCI 254 (362)
Q Consensus 181 ~i~~~~~~nv~I~~v~i~n~~~------~~i~~~~~~nv~i~n~~I~~~~~~~~~DGI~~~~s~nv~I~n~~i~~gdD~i 254 (362)
.+.+ .+++++++|++|+|... -.+.+ .++++.+.||+|.+ ..|++.....+ -.+++|+|...-|-|
T Consensus 84 tv~v-~a~~f~~~~lt~~Nt~g~~~~qAvAl~v-~~d~~~f~~c~f~g-----~QDTLy~~~~r-~~~~~c~I~G~vDFI 155 (317)
T 1xg2_A 84 TLAA-VGQGFILQDICIQNTAGPAKDQAVALRV-GADMSVINRCRIDA-----YQDTLYAHSQR-QFYRDSYVTGTVDFI 155 (317)
T ss_dssp SEEE-CSTTCEEESCEEEECCCGGGCCCCSEEE-CCTTEEEESCEEEC-----STTCEEECSSE-EEEESCEEEESSSCE
T ss_pred EEEE-ECCCEEEEEeEEecccCCccCceEEEEE-eCCcEEEEEeEeCc-----cccceeecCcc-EEEEeeEEEeceeEE
Confidence 3555 58999999999999742 23444 68899999999998 56788887765 499999999766654
Q ss_pred EEcCCceeEEEEeeEEcC-----CceeEEeecCCCCCcccEEeEEEEcEEEeCCceeE----EEEeeCCCC-ceEEeEEE
Q 017991 255 SIVGNSSLIRIRNFACGP-----GHGISIGSLGKSNSSVRIHDIMVYGALISNTQNGV----RIKTWQGGS-GSATNIQF 324 (362)
Q Consensus 255 ~i~s~~~ni~i~n~~~~~-----~~gi~igs~g~~~~~~~v~ni~i~n~~i~~~~~gi----~i~~~~g~~-g~i~ni~~ 324 (362)
. +. ....++||++.. +..-.|-.-++ .....-....|.||+|....... ..++.-|++ +.-..++|
T Consensus 156 f-G~--~~avf~~c~i~~~~~~~~~~~~itA~~r-~~~~~~~G~vf~~c~i~~~~~~~~~~~~~~~yLGRpW~~~sr~v~ 231 (317)
T 1xg2_A 156 F-GN--AAVVFQKCQLVARKPGKYQQNMVTAQGR-TDPNQATGTSIQFCNIIASSDLEPVLKEFPTYLGRPWKEYSRTVV 231 (317)
T ss_dssp E-EC--CEEEEESCEEEECCCSTTCCEEEEEECC-CCTTSCCEEEEESCEEEECTTTGGGTTTSCEEEECCSSTTCEEEE
T ss_pred c-CC--ceEEEeeeEEEEeccCCCCccEEEecCc-CCCCCCcEEEEECCEEecCCCccccccceeEEeecccCCCceEEE
Confidence 3 33 357899998752 11112222121 12334567899999998653210 001111221 22346899
Q ss_pred EeEEEecC
Q 017991 325 LDVLMKNV 332 (362)
Q Consensus 325 ~ni~~~~~ 332 (362)
.|..|.+.
T Consensus 232 ~~t~~~~~ 239 (317)
T 1xg2_A 232 MESYLGGL 239 (317)
T ss_dssp ESCEECTT
T ss_pred EecccCCc
Confidence 99998875
No 48
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=98.54 E-value=5.9e-07 Score=84.21 Aligned_cols=125 Identities=12% Similarity=0.044 Sum_probs=87.8
Q ss_pred ecceEEEceE------E-e----------eCCCceeEEeceeeEEEEeEEEECCCCCCCCCee-ee-cCccCEEEEeeEE
Q 017991 187 CKNLKVQNLR------V-V----------NSQQMHIAFTNCLRVVISNLEVIAPAESPNTDGI-HI-SASRGVEVKNSIV 247 (362)
Q Consensus 187 ~~nv~I~~v~------i-~----------n~~~~~i~~~~~~nv~i~n~~I~~~~~~~~~DGI-~~-~~s~nv~I~n~~i 247 (362)
-+|++|+++. + + .....+|.+..+++|.|++|++.. ..||+ ++ ..+++|||++|+|
T Consensus 118 Irnl~i~~~~~~~~~~I~~~~~~~~g~~~~~~~DaI~i~~s~nVwIDHcs~s~-----~~Dg~id~~~~s~~vTISnn~f 192 (346)
T 1pxz_A 118 LHSLHIHGCNTSVLGDVLVSESIGVEPVHAQDGDAITMRNVTNAWIDHNSLSD-----CSDGLIDVTLGSTGITISNNHF 192 (346)
T ss_dssp EESCEEECCCCCCSEEEEEETTTEEEEECCCCCCSEEEESCEEEEEESCEEEC-----CSSEEEEEESSCEEEEEESCEE
T ss_pred EEeeEEEeeccCCCceEEeccCcccccccCCCCCEEEEecCceEEEEeeEEec-----CCCCcEeeccCcceEEEEeeEE
Confidence 3578888764 2 1 234567999999999999999997 57887 67 5899999999999
Q ss_pred ecCCccEEEcCC-------ceeEEEEeeEE-cCCc--eeEEeecCCCCCcccEEeEEEEcEEEeCCc-eeEEEEeeCCCC
Q 017991 248 GTGDDCISIVGN-------SSLIRIRNFAC-GPGH--GISIGSLGKSNSSVRIHDIMVYGALISNTQ-NGVRIKTWQGGS 316 (362)
Q Consensus 248 ~~gdD~i~i~s~-------~~ni~i~n~~~-~~~~--gi~igs~g~~~~~~~v~ni~i~n~~i~~~~-~gi~i~~~~g~~ 316 (362)
...+.++-+.+. ..+|++.+|.| .+.. .-.+.. ..+++.||.+.+-. +++....
T Consensus 193 ~~H~k~~l~G~sd~~~~d~~~~vT~~~N~f~~~~~~R~Pr~r~----------g~~hv~NN~~~~~~~~~i~~~~----- 257 (346)
T 1pxz_A 193 FNHHKVMLLGHDDTYDDDKSMKVTVAFNQFGPNAGQRMPRARY----------GLVHVANNNYDPWNIYAIGGSS----- 257 (346)
T ss_dssp ESEEEEEEESCCSSCGGGGGCEEEEESCEECSSEEECTTEEES----------SEEEEESCEECCCSSCSEEEES-----
T ss_pred ecCCceeEECCCCccccCCceEEEEEeeEEeCCccccCccEec----------ceEEEEeeEEEcccceEEeccC-----
Confidence 987766666542 24899999999 4321 112211 36889999998743 4554431
Q ss_pred ceEEeEEEEeEEEecCC
Q 017991 317 GSATNIQFLDVLMKNVS 333 (362)
Q Consensus 317 g~i~ni~~~ni~~~~~~ 333 (362)
-..+.+|++.++...
T Consensus 258 --~~~i~~egN~F~~~~ 272 (346)
T 1pxz_A 258 --NPTILSEGNSFTAPS 272 (346)
T ss_dssp --CCEEEEESCEEECCS
T ss_pred --CceEEEECCEEECCC
Confidence 135777777777654
No 49
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=98.53 E-value=1.7e-06 Score=80.15 Aligned_cols=90 Identities=16% Similarity=0.162 Sum_probs=53.0
Q ss_pred EEEEeecceEEEceEEeeCC---CceeEEec-eeeEEEEeEEEECCC----CCCCCCe-eeec-CccCEEEEeeEEecCC
Q 017991 182 ITFHKCKNLKVQNLRVVNSQ---QMHIAFTN-CLRVVISNLEVIAPA----ESPNTDG-IHIS-ASRGVEVKNSIVGTGD 251 (362)
Q Consensus 182 i~~~~~~nv~I~~v~i~n~~---~~~i~~~~-~~nv~i~n~~I~~~~----~~~~~DG-I~~~-~s~nv~I~n~~i~~gd 251 (362)
|.+..++||.|++++|++.. ..+|.+.. +++|-|++|++.... +..-.|| +++. ++.+|||++|.|...+
T Consensus 97 l~i~~a~NVIIrNl~i~~~~~~~~DaI~i~~~s~nVWIDH~s~s~~~~g~~~~~~~Dgl~di~~~s~~VTISnn~f~~h~ 176 (326)
T 3vmv_A 97 IRLSNAHNIIIQNVSIHHVREGEGTAIEVTDDSKNVWIDHNEFYSEFPGNGDSDYYDGLVDMKRNAEYITVSWNKFENHW 176 (326)
T ss_dssp EEEESEEEEEEESCEEECCCSTTSCSEEEETTCEEEEEESCEEECCSSTTSCTTSSCCSEEECTTCEEEEEESCEEEEEE
T ss_pred EEEEecceEEEECeEEEcCCCCCCCeEEEecCCCcEEEEeeEEeccccCCcCccccCcceEecCCCceEEEEceEEecCc
Confidence 66777888888888888753 33566665 677777777775311 1112344 3443 3566777777776544
Q ss_pred ccEEEcCC------ceeEEEEeeEEc
Q 017991 252 DCISIVGN------SSLIRIRNFACG 271 (362)
Q Consensus 252 D~i~i~s~------~~ni~i~n~~~~ 271 (362)
-+.-+++. -.+|++.+|.|.
T Consensus 177 k~~LiG~sd~~~~~~~~vT~~~N~f~ 202 (326)
T 3vmv_A 177 KTMLVGHTDNASLAPDKITYHHNYFN 202 (326)
T ss_dssp ECEEECSSSCGGGCCEEEEEESCEEE
T ss_pred eEEEECCCCCCcccCccEEEEeeEec
Confidence 44444432 135666666664
No 50
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=98.52 E-value=4.2e-06 Score=77.98 Aligned_cols=91 Identities=15% Similarity=0.111 Sum_probs=57.2
Q ss_pred EEEEE-eecceEEEceEEeeCC----CceeEEe-----ceeeEEEEeEEEECCCC------CCCCCe-eeec-CccCEEE
Q 017991 181 AITFH-KCKNLKVQNLRVVNSQ----QMHIAFT-----NCLRVVISNLEVIAPAE------SPNTDG-IHIS-ASRGVEV 242 (362)
Q Consensus 181 ~i~~~-~~~nv~I~~v~i~n~~----~~~i~~~-----~~~nv~i~n~~I~~~~~------~~~~DG-I~~~-~s~nv~I 242 (362)
.|.+. .++||.|++++|++.. ...|.+. .+++|-|++|.+....+ ..-.|| |++. .+.+|||
T Consensus 87 gl~i~~~~~NVIIrnl~i~~~~~~~~~DaI~i~g~~~~~s~nVWIDH~s~s~~~~~~~~~~~~~~Dg~idi~~~s~~VTI 166 (330)
T 2qy1_A 87 GIRVVGNAHNVIIQNMTIGLLQGGEDADSISLEGNSSGEPSKIWVDHNTVFASLTKCSGAGDASFDGGIDMKKGVHHVTV 166 (330)
T ss_dssp EEEEESSCEEEEEESCEEESCSSGGGCCSEEEECBTTBCCEEEEEESCEEECCCCCCTTCTTCSSCCSEEEESSCEEEEE
T ss_pred eEEEeCCCCeEEEeCeEEeCCCCCCCCcceeeccccCcccccEEEEeEEEEccccccccCCcceeecccccccCcceEEE
Confidence 47777 7888999999888753 4467777 47888888888863210 011144 4554 4678888
Q ss_pred EeeEEecCCccEEEcCC-------ceeEEEEeeEEc
Q 017991 243 KNSIVGTGDDCISIVGN-------SSLIRIRNFACG 271 (362)
Q Consensus 243 ~n~~i~~gdD~i~i~s~-------~~ni~i~n~~~~ 271 (362)
++|+|...+-+.-+++. ..+|++.+|.|.
T Consensus 167 Snn~f~~h~k~~L~G~sd~~~~~~~~~vT~h~N~f~ 202 (330)
T 2qy1_A 167 SYNYVYNYQKVALNGYSDSDTKNSAARTTYHHNRFE 202 (330)
T ss_dssp ESCEEEEEEECCEESSSTTCGGGGGCEEEEESCEEE
T ss_pred EcceeccCCeEEEECCCCccccCCCceEEEECcEEc
Confidence 88888754444444331 146777777664
No 51
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=98.46 E-value=3.9e-06 Score=79.00 Aligned_cols=138 Identities=11% Similarity=0.184 Sum_probs=88.8
Q ss_pred EEEEeecceEEEceEEeeCCC--------------------ceeEEe-ceeeEEEEeEEEECCCCCCCCCeeeecCccCE
Q 017991 182 ITFHKCKNLKVQNLRVVNSQQ--------------------MHIAFT-NCLRVVISNLEVIAPAESPNTDGIHISASRGV 240 (362)
Q Consensus 182 i~~~~~~nv~I~~v~i~n~~~--------------------~~i~~~-~~~nv~i~n~~I~~~~~~~~~DGI~~~~s~nv 240 (362)
+.+ .+++++++|++|+|... -.+.+. .++...+.+|++.+ ..|.+......+.
T Consensus 117 v~V-~a~~f~a~nitf~Nt~~~~~~~~~~~~~p~~~~~~QAvAl~v~~~~D~~~f~~C~f~G-----~QDTLy~~~~gr~ 190 (364)
T 3uw0_A 117 VLV-NAPNFTAENLTIRNDFDFPANKKKADTDPTKLKDTQAVALLLAENSDKARFKAVKLEG-----YQDTLYSKTGSRS 190 (364)
T ss_dssp EEE-CSTTCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCEEEEEEEEEEEC-----SBSCEEECTTCEE
T ss_pred EEE-ECCCEEEEeeeeEcCCcccccccccccccccccCCccEEEEEecCCCeEEEEeeEEEe-----cccceEeCCCCCE
Confidence 444 58999999999999742 124443 58999999999998 5688888755689
Q ss_pred EEEeeEEecCCccEEEcCCceeEEEEeeEEcC-------C-ce-eEEeecCCCCCcccEEeEEEEcEEEeCCce---e-E
Q 017991 241 EVKNSIVGTGDDCISIVGNSSLIRIRNFACGP-------G-HG-ISIGSLGKSNSSVRIHDIMVYGALISNTQN---G-V 307 (362)
Q Consensus 241 ~I~n~~i~~gdD~i~i~s~~~ni~i~n~~~~~-------~-~g-i~igs~g~~~~~~~v~ni~i~n~~i~~~~~---g-i 307 (362)
.+++|+|...-|=| ++. -...++||++.. . .| |.--+ .....-....|.||+|.+... + .
T Consensus 191 yf~~c~I~GtvDFI-FG~--a~a~f~~c~i~~~~~~~~~~~~g~ITA~~----~~~~~~~G~vf~~c~i~~~~~~~~~~~ 263 (364)
T 3uw0_A 191 YFSDCEISGHVDFI-FGS--GITVFDNCNIVARDRSDIEPPYGYITAPS----TLTTSPYGLIFINSRLTKEPGVPANSF 263 (364)
T ss_dssp EEESCEEEESEEEE-EES--SEEEEESCEEEECCCSSCSSCCEEEEEEC----CCTTCSCCEEEESCEEEECTTCCSSCE
T ss_pred EEEcCEEEcCCCEE-CCc--ceEEEEeeEEEEeccCcccCCccEEEeCC----cCCCCCcEEEEEeeEEecCCCCccccE
Confidence 99999999654533 333 367899998742 1 23 33222 112223568999999986421 1 1
Q ss_pred EE-EeeCCC----------CceEEeEEEEeEEEecC
Q 017991 308 RI-KTWQGG----------SGSATNIQFLDVLMKNV 332 (362)
Q Consensus 308 ~i-~~~~g~----------~g~i~ni~~~ni~~~~~ 332 (362)
.+ +.|... +..+..+.|.|..|.+.
T Consensus 264 yLGRPW~~~s~~~~g~yadp~a~~rvVf~~s~m~~~ 299 (364)
T 3uw0_A 264 ALGRPWHPTTTFADGRYADPAAIGQSVFINTTMDDH 299 (364)
T ss_dssp EEECCCCCEEECSSCEEECTTCCCEEEEESCEECTT
T ss_pred EeccccccccccccccccccCccceEEEEeCCCCce
Confidence 11 233221 01124789999888775
No 52
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=98.42 E-value=2.6e-06 Score=80.01 Aligned_cols=140 Identities=16% Similarity=0.146 Sum_probs=69.1
Q ss_pred EEEEEeecceEEEceEEeeCC-----CceeEEeceeeEEEEeEEEECCCCC--------CCCCe-eeec-CccCEEEEee
Q 017991 181 AITFHKCKNLKVQNLRVVNSQ-----QMHIAFTNCLRVVISNLEVIAPAES--------PNTDG-IHIS-ASRGVEVKNS 245 (362)
Q Consensus 181 ~i~~~~~~nv~I~~v~i~n~~-----~~~i~~~~~~nv~i~n~~I~~~~~~--------~~~DG-I~~~-~s~nv~I~n~ 245 (362)
.|.+..++||.|++++|+..+ ...|.+..+++|-|++|.+....+. ...|| +++. .+.+|||++|
T Consensus 104 gl~i~~~~NVIIrnl~i~~~~~~~~~~DaI~i~~s~nVWIDH~s~s~~~~~~~g~~~~~~~~DGl~di~~~s~~VTISnn 183 (353)
T 1air_A 104 GIWIKKSSDVVVQNMRIGYLPGGAKDGDMIRVDDSPNVWVDHNELFAANHECDGTPDNDTTFESAVDIKGASNTVTVSYN 183 (353)
T ss_dssp EEEEESCCSEEEESCEEESCSCGGGTCCSEEEESCCSEEEESCEEECCSCCCTTCGGGCCSSCCSEEEESSCCEEEEESC
T ss_pred eEEEeccCcEEEeccEEEeCCCCCCCCCeEEeeCCCcEEEEeeEEecCCcccccccccccccccceeeecccCcEEEEee
Confidence 477778888888888888543 2345556666666666666532110 01243 3442 4556666666
Q ss_pred EEecCCccEEEcCC----ceeEEEEeeEEcCCc--eeEEeecCCCCCcccEEeEEEEcEEEeCCc-eeEEEEeeCCCCce
Q 017991 246 IVGTGDDCISIVGN----SSLIRIRNFACGPGH--GISIGSLGKSNSSVRIHDIMVYGALISNTQ-NGVRIKTWQGGSGS 318 (362)
Q Consensus 246 ~i~~gdD~i~i~s~----~~ni~i~n~~~~~~~--gi~igs~g~~~~~~~v~ni~i~n~~i~~~~-~gi~i~~~~g~~g~ 318 (362)
.|...+-+.-+++. ..+|++.+|.|.+.. .-.+.. -.+++-|+.+.+.. +++... .+
T Consensus 184 ~f~~h~k~~LiG~sd~~~g~~vT~hhN~f~~~~~R~Pr~r~----------G~~Hv~NN~~~n~~~~~~~~~--~~---- 247 (353)
T 1air_A 184 YIHGVKKVGLDGSSSSDTGRNITYHHNYYNDVNARLPLQRG----------GLVHAYNNLYTNITGSGLNVR--QN---- 247 (353)
T ss_dssp EEEEEEECCEESSSTTCCCCEEEEESCEEEEEEECSCEEES----------SEEEEESCEEEEESSCSEEEE--TT----
T ss_pred EEcCCCceeEECCCcCCCCceEEEEceEEcCCcCCCCCCcC----------ceEEEEccEEECCCCceeccC--CC----
Confidence 66543322222221 134555555553210 011100 13445555554422 233321 11
Q ss_pred EEeEEEEeEEEecCCccEE
Q 017991 319 ATNIQFLDVLMKNVSNPII 337 (362)
Q Consensus 319 i~ni~~~ni~~~~~~~~i~ 337 (362)
..|.+||+.+++++.|+.
T Consensus 248 -~~i~~e~N~F~~~~~p~~ 265 (353)
T 1air_A 248 -GQALIENNWFEKAINPVT 265 (353)
T ss_dssp -CEEEEESCEEEEEESSEE
T ss_pred -cEEEEEceEEECCCCceE
Confidence 146677777777666663
No 53
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=98.41 E-value=7e-06 Score=76.36 Aligned_cols=159 Identities=12% Similarity=0.092 Sum_probs=105.4
Q ss_pred eeEEEEeccEEecCCCeeeecccccCCCCCCCCCCeEEEEEeecceEEEceEE------eeCCCceeEEeceeeEEEEeE
Q 017991 145 NHLTVQGGGTINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKVQNLRV------VNSQQMHIAFTNCLRVVISNL 218 (362)
Q Consensus 145 ~ni~I~G~G~idG~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~nv~I~~v~i------~n~~~~~i~~~~~~nv~i~n~ 218 (362)
..+.|.-.-+|+|++..-.....- ......-+- .+|++|++... .++...+|.+..+++|-|++|
T Consensus 62 ~~l~v~snkTI~G~ga~~I~G~Gi------~I~~a~NVI---Irnl~i~~~~~~~~~~~~~~~~DaI~i~~s~nVWIDHc 132 (340)
T 3zsc_A 62 REIKVLSDKTIVGINDAKIVGGGL------VIKDAQNVI---IRNIHFEGFYMEDDPRGKKYDFDYINVENSHHIWIDHI 132 (340)
T ss_dssp EEEEECSSEEEEEEEEEEEEEEEE------EEESCEEEE---EESCEEECCCCTTCTTSCSSCCCSEEEESCEEEEEESC
T ss_pred ceEEecCCCEEEeccCcEEecCce------EEEcCceEE---EeCeEEECCccccCccCCcCCCCeEEEecCCcEEEEee
Confidence 467876667999988651111100 011122333 35888888753 133677899999999999999
Q ss_pred EEECCCCCCCCCe-eeec-CccCEEEEeeEEecCCccEEEcCC----------ceeEEEEeeEEcCCc----eeEEeecC
Q 017991 219 EVIAPAESPNTDG-IHIS-ASRGVEVKNSIVGTGDDCISIVGN----------SSLIRIRNFACGPGH----GISIGSLG 282 (362)
Q Consensus 219 ~I~~~~~~~~~DG-I~~~-~s~nv~I~n~~i~~gdD~i~i~s~----------~~ni~i~n~~~~~~~----gi~igs~g 282 (362)
.+.. ..|| +++. .+++|||++|.|...+-+.-+++. ..+|++.+|.|.... .++.|
T Consensus 133 s~s~-----~~Dg~idi~~~s~~vTISnn~f~~h~k~~LiG~sd~~~~~~d~g~~~vT~hhN~f~~~~~R~Pr~r~G--- 204 (340)
T 3zsc_A 133 TFVN-----GNDGAVDIKKYSNYITVSWNKFVDHDKVSLVGSSDKEDPEQAGQAYKVTYHHNYFKNLIQRMPRIRFG--- 204 (340)
T ss_dssp EEES-----CSSCSEEEETTCEEEEEESCEEESCSBCCEECCCTTSCHHHHHHSCEEEEESCEEESCCBCTTEEESS---
T ss_pred eecc-----CCccceEEecCCceEEEECcEeccCceeeEeCcCCCCccccccCCcEEEEECeEecCCCCCCCcccCC---
Confidence 9998 4677 7776 589999999999987666655542 138999999986532 13211
Q ss_pred CCCCcccEEeEEEEcEEEeCC---------ceeEEEEeeCCCCceEEeEEEEeEEEecCCc
Q 017991 283 KSNSSVRIHDIMVYGALISNT---------QNGVRIKTWQGGSGSATNIQFLDVLMKNVSN 334 (362)
Q Consensus 283 ~~~~~~~v~ni~i~n~~i~~~---------~~gi~i~~~~g~~g~i~ni~~~ni~~~~~~~ 334 (362)
.+++-||.+.+. -.+-.+....+ ..|.+|++.++++++
T Consensus 205 ---------~~Hv~NN~~~n~~~~~~~~~~~~~yai~~~~~-----a~i~~E~N~F~~~~~ 251 (340)
T 3zsc_A 205 ---------MAHVFNNFYSMGLRTGVSGNVFPIYGVASAMG-----AKVHVEGNYFMGYGA 251 (340)
T ss_dssp ---------EEEEESCEEECCCCCSCSSCCSCCEEEEEETT-----CEEEEESCEEECSCH
T ss_pred ---------eEEEEccEEECCccccccccceeeeeEecCCC-----CEEEEECcEEECCCc
Confidence 468889999881 01112223233 378889999998888
No 54
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=98.33 E-value=6.4e-06 Score=77.63 Aligned_cols=128 Identities=7% Similarity=0.184 Sum_probs=95.4
Q ss_pred cceEEEceEEeeC-----C------CceeEEec-eeeEEEEeEEEECCCCCCCCCeeeecCccCEEEEeeEEecCCccEE
Q 017991 188 KNLKVQNLRVVNS-----Q------QMHIAFTN-CLRVVISNLEVIAPAESPNTDGIHISASRGVEVKNSIVGTGDDCIS 255 (362)
Q Consensus 188 ~nv~I~~v~i~n~-----~------~~~i~~~~-~~nv~i~n~~I~~~~~~~~~DGI~~~~s~nv~I~n~~i~~gdD~i~ 255 (362)
++|+|++++|.+. . .-+|.+.. .+++.|++++|.. +.=||.+..+++++|+++.|.....||.
T Consensus 136 s~V~~~~v~I~G~~~~~~G~s~~~~dAGI~v~~~~d~~~I~nn~i~~-----~~fGI~l~~a~~~~I~~N~I~e~GNgI~ 210 (410)
T 2inu_A 136 SGIVFRDFCLDGVGFTPGKNSYHNGKTGIEVASDNDSFHITGMGFVY-----LEHALIVRGADALRVNDNMIAECGNCVE 210 (410)
T ss_dssp ECCEEESCEEECCCCSSSTTSCCCSCEEEEECSCEESCEEESCEEES-----CSEEEEETTEESCEEESCEEESSSEEEE
T ss_pred CCcEECCEEEECCEeecCCCCcccCceeEEEeccCCeEEEECCEEec-----ccEEEEEccCCCcEEECCEEEecCCcee
Confidence 6777777777765 3 23577765 8899999999998 6779999999999999999998788999
Q ss_pred EcCCceeEEEEeeEEcCC---ceeEEeecCCCCCcccEEeEEEEcEEE-eCCceeEEEEeeCCCCceEEeEEEEeEEEec
Q 017991 256 IVGNSSLIRIRNFACGPG---HGISIGSLGKSNSSVRIHDIMVYGALI-SNTQNGVRIKTWQGGSGSATNIQFLDVLMKN 331 (362)
Q Consensus 256 i~s~~~ni~i~n~~~~~~---~gi~igs~g~~~~~~~v~ni~i~n~~i-~~~~~gi~i~~~~g~~g~i~ni~~~ni~~~~ 331 (362)
++..++...|+|+.+... +|+.+.. ..+..|+++.+ .+..+|+.+.. ..+-.|+++++.+
T Consensus 211 L~G~~~~~~I~~N~i~~~~dG~gIyl~n---------s~~~~I~~N~i~~~~R~gIh~m~-------s~~~~i~~N~f~~ 274 (410)
T 2inu_A 211 LTGAGQATIVSGNHMGAGPDGVTLLAEN---------HEGLLVTGNNLFPRGRSLIEFTG-------CNRCSVTSNRLQG 274 (410)
T ss_dssp ECSCEESCEEESCEEECCTTSEEEEEES---------EESCEEESCEECSCSSEEEEEES-------CBSCEEESCEEEE
T ss_pred eccccccceEecceeeecCCCCEEEEEe---------CCCCEEECCCcccCcceEEEEEc-------cCCCEEECCEEec
Confidence 998778889999998754 3466543 57778888877 45778888864 2334444444444
Q ss_pred CCccE
Q 017991 332 VSNPI 336 (362)
Q Consensus 332 ~~~~i 336 (362)
...++
T Consensus 275 ~~~Gi 279 (410)
T 2inu_A 275 FYPGM 279 (410)
T ss_dssp SSSCS
T ss_pred ceeEE
Confidence 44433
No 55
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=98.31 E-value=7.9e-06 Score=76.80 Aligned_cols=20 Identities=10% Similarity=0.306 Sum_probs=14.8
Q ss_pred EEEE---EeecceEEEceEEeeC
Q 017991 181 AITF---HKCKNLKVQNLRVVNS 200 (362)
Q Consensus 181 ~i~~---~~~~nv~I~~v~i~n~ 200 (362)
.|.+ ..++||.|++|+|++.
T Consensus 104 gl~i~~~~~~~NVIIrNl~i~~~ 126 (361)
T 1pe9_A 104 SLIIDGTDGTNNVIIRNVYIQTP 126 (361)
T ss_dssp EEEEEGGGTCEEEEEESCEEECC
T ss_pred EEEEecCCCCceEEEeCeEEEcC
Confidence 3666 5678888888888853
No 56
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=98.28 E-value=3.3e-06 Score=79.27 Aligned_cols=117 Identities=15% Similarity=0.126 Sum_probs=85.4
Q ss_pred EEEEe-ecceEEEceEEeeCCCceeEEeceeeEEEEeEEEECCCC-CCCCCeeeecCccCEEEEeeEEecC---------
Q 017991 182 ITFHK-CKNLKVQNLRVVNSQQMHIAFTNCLRVVISNLEVIAPAE-SPNTDGIHISASRGVEVKNSIVGTG--------- 250 (362)
Q Consensus 182 i~~~~-~~nv~I~~v~i~n~~~~~i~~~~~~nv~i~n~~I~~~~~-~~~~DGI~~~~s~nv~I~n~~i~~g--------- 250 (362)
+.+.. .+|++|-+.+-. ..+.++.+..++||.|+|++|+.... ....|+|.+..++||.|++|.+..+
T Consensus 82 ~~i~~~~sn~TI~G~~~~-~~g~gl~i~~~~NVIIrnl~i~~~~~~~~~~DaI~i~~s~nVWIDH~s~s~~~~~~~g~~~ 160 (353)
T 1air_A 82 VEIKEFTKGITIIGANGS-SANFGIWIKKSSDVVVQNMRIGYLPGGAKDGDMIRVDDSPNVWVDHNELFAANHECDGTPD 160 (353)
T ss_dssp EEEESBCSCEEEEECTTC-CBSSEEEEESCCSEEEESCEEESCSCGGGTCCSEEEESCCSEEEESCEEECCSCCCTTCGG
T ss_pred eEEEecCCCEEEEeccCC-CCCceEEEeccCcEEEeccEEEeCCCCCCCCCeEEeeCCCcEEEEeeEEecCCcccccccc
Confidence 44443 467777775321 13567888899999999999996432 2467999999999999999999743
Q ss_pred -----CccEEEcCCceeEEEEeeEEcCCc-eeEEeecCCCCCcccEEeEEEEcEEEeCC
Q 017991 251 -----DDCISIVGNSSLIRIRNFACGPGH-GISIGSLGKSNSSVRIHDIMVYGALISNT 303 (362)
Q Consensus 251 -----dD~i~i~s~~~ni~i~n~~~~~~~-gi~igs~g~~~~~~~v~ni~i~n~~i~~~ 303 (362)
|..+.++.++++|+|+||+|...+ +.-+|+. ..... .+|+|.+|.+.+.
T Consensus 161 ~~~~~DGl~di~~~s~~VTISnn~f~~h~k~~LiG~s---d~~~g-~~vT~hhN~f~~~ 215 (353)
T 1air_A 161 NDTTFESAVDIKGASNTVTVSYNYIHGVKKVGLDGSS---SSDTG-RNITYHHNYYNDV 215 (353)
T ss_dssp GCCSSCCSEEEESSCCEEEEESCEEEEEEECCEESSS---TTCCC-CEEEEESCEEEEE
T ss_pred cccccccceeeecccCcEEEEeeEEcCCCceeEECCC---cCCCC-ceEEEEceEEcCC
Confidence 556778778999999999998543 3445552 11112 6899999999775
No 57
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=98.25 E-value=4.1e-06 Score=80.16 Aligned_cols=45 Identities=22% Similarity=0.298 Sum_probs=27.3
Q ss_pred CCCeeeecCccCEEEEeeEEecC------------------CccEEEcCCceeEEEEeeEEcC
Q 017991 228 NTDGIHISASRGVEVKNSIVGTG------------------DDCISIVGNSSLIRIRNFACGP 272 (362)
Q Consensus 228 ~~DGI~~~~s~nv~I~n~~i~~g------------------dD~i~i~s~~~ni~i~n~~~~~ 272 (362)
..|+|.+.+++||.|++|.|..+ |..+.++.++.+|+|+||+|..
T Consensus 188 ~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~Gr~~~~~DGl~Di~~~s~~VTISnn~f~~ 250 (416)
T 1vbl_A 188 EYDSISIEGSSHIWIDHNTFTDGDHPDRSLGTYFGRPFQQHDGALDIKNSSDFITISYNVFTN 250 (416)
T ss_dssp CCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCCCCCSEEEESSCEEEEEESCEEEE
T ss_pred CCceEEecCCceEEEEccEEecCCCcccccccccCcceeecccceeeecCCCcEEEEeeEEcC
Confidence 35666666666666666666643 4445555556666666666653
No 58
>2x3h_A K5 lyase, K5A lyase; bacteriophage, glycosaminoglycan; 1.60A {Enterobacteria phage k1-5}
Probab=98.22 E-value=0.00028 Score=63.22 Aligned_cols=192 Identities=19% Similarity=0.255 Sum_probs=123.4
Q ss_pred CeeEEeeeccccCCCCcchHHHHHHHHHHHcCCCCCcEEEEcCCcEEEeeeeeccCCCCCCceEEEE--eEEECCCCCCC
Q 017991 52 KRVIFVGDFGAKGDGFNDDTEAFANAWKKACSFPARTKIVFSAGYTFLIHPIDISGPCKSRLTLEIS--GTIVAPKDPDV 129 (362)
Q Consensus 52 ~~~~~v~~~Ga~~dg~~ddt~aiq~Ai~~a~~~~gg~~v~~P~G~~Y~i~~l~l~~~~~s~v~l~~~--G~i~~~~~~~~ 129 (362)
++++.+++|||.+|-.+||+++|.+.|+. -.-|++|.| .|...-+.+ +.-.|++. |+|...+....
T Consensus 62 arvls~k~fga~~~~~~d~~~~~~~sl~s------~~~v~i~~g-vf~ss~i~~-----~~c~l~g~g~g~~~~~~~~gn 129 (542)
T 2x3h_A 62 ARVLTSKPFGAAGDATTDDTEVIAASLNS------QKAVTISDG-VFSSSGINS-----NYCNLDGRGSGVLSHRSSTGN 129 (542)
T ss_dssp HHBCBSSCTTCCCBSSSCCHHHHHHHHTS------SSCEECCSE-EEEECCEEE-----SCCEEECTTTEEEEECSSSSC
T ss_pred heeeecccccccCCcccCcHHHHHhhhcc------cccEecccc-ccccccccc-----ccccccccCCceeeeecCCCC
Confidence 46788899999999999999999999973 467999999 998776666 45567765 57764332211
Q ss_pred cCCCCccccEEE-----eceeeEEEEeccEEecCCCeeeecccccCCCCCCCCCCeEEEEEeecceEEEceEEeeCCCce
Q 017991 130 WKGLNRRRWLYF-----NRVNHLTVQGGGTINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKVQNLRVVNSQQMH 204 (362)
Q Consensus 130 ~~~~~~~~~i~~-----~~~~ni~I~G~G~idG~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~nv~I~~v~i~n~~~~~ 204 (362)
.+.| ....+++|+|.-.-| ....+-+.|....+|+++++.+.|..+-+
T Consensus 130 --------~lvfn~p~~g~ls~~ti~~nk~~d-------------------s~qg~qvs~~gg~dvsv~~i~fsn~~g~g 182 (542)
T 2x3h_A 130 --------YLVFNNPRTGRLSNITVESNKATD-------------------TTQGQQVSLAGGSDVTVSDVNFSNVKGTG 182 (542)
T ss_dssp --------CEEEESCEEEEEEEEEEECCCSST-------------------TCBCCSEEEESCEEEEEEEEEEEEECSBE
T ss_pred --------EEEEeCCCCcceeeEEEecccCCc-------------------cccceEEEecCCCcceEeeeeeeecCCCc
Confidence 1222 234677766631100 12223488888999999999999976666
Q ss_pred eEEe------ceeeEEEEeEEEECCCCCCC--CCeeeecCccCEEEEeeEEecC--CccEEEcCCceeEEEEeeEEcCC-
Q 017991 205 IAFT------NCLRVVISNLEVIAPAESPN--TDGIHISASRGVEVKNSIVGTG--DDCISIVGNSSLIRIRNFACGPG- 273 (362)
Q Consensus 205 i~~~------~~~nv~i~n~~I~~~~~~~~--~DGI~~~~s~nv~I~n~~i~~g--dD~i~i~s~~~ni~i~n~~~~~~- 273 (362)
+.+. --+...|++++=.-.+.+.| +..+-+++|.|-+|++...++- -.++.++...+.-.|.|..=..+
T Consensus 183 fsliayp~~~~p~g~~i~~irg~y~g~a~nk~agcvl~dss~nslid~via~nypqfgavelk~~a~ynivsnvig~~cq 262 (542)
T 2x3h_A 183 FSLIAYPNDAPPDGLMIKGIRGSYSGYATNKAAGCVLADSSVNSLIDNVIAKNYPQFGAVELKGTASYNIVSNVIGADCQ 262 (542)
T ss_dssp EEEEEECSSSCCBSCEEEEEEEEECSCCTTCSEEEEEEESCBSCEEEEEEEESCCTTEEEEEETTCBSCEEEEEEEESCS
T ss_pred eeEEEcCCCCCCCceEEeccccceeccccccccceEEeccchhhhhhhhhhhcCCccceEEeecceeeehhhhhhhccce
Confidence 5443 13456677776553333322 3334567889999999988874 45666776544444555433333
Q ss_pred ceeEEeecC
Q 017991 274 HGISIGSLG 282 (362)
Q Consensus 274 ~gi~igs~g 282 (362)
|-..-|.++
T Consensus 263 hv~yngte~ 271 (542)
T 2x3h_A 263 HVTYNGTEG 271 (542)
T ss_dssp EEEEEECSS
T ss_pred eEEECCccC
Confidence 334445543
No 59
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=98.15 E-value=7.9e-06 Score=77.83 Aligned_cols=75 Identities=15% Similarity=0.109 Sum_probs=41.8
Q ss_pred CCCeeeecCccCEEEEeeEEecC------------------CccEEEcCCceeEEEEeeEEcCCc-eeEEeecCCCCCcc
Q 017991 228 NTDGIHISASRGVEVKNSIVGTG------------------DDCISIVGNSSLIRIRNFACGPGH-GISIGSLGKSNSSV 288 (362)
Q Consensus 228 ~~DGI~~~~s~nv~I~n~~i~~g------------------dD~i~i~s~~~ni~i~n~~~~~~~-gi~igs~g~~~~~~ 288 (362)
..|+|.+..++||.|++|.+..+ |..+.++.++.+|+|+||+|..-. +.-+|+.-......
T Consensus 182 ~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~G~~~~~~Dgl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~ 261 (399)
T 2o04_A 182 QYDNITINGGTHIWIDHCTFNDGSRPDSTSPKYYGRKYQHHDGQTDASNGANYITMSYNYYHDHDKSSIFGSSDSKTSDD 261 (399)
T ss_dssp CCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCCCCCSEEEETTCEEEEEESCEEEEEEECCEESCCTTCGGGT
T ss_pred CCCeEEecCCCcEEEEeeeeecCCCccccccccccceeeccccceeeeccCCcEEEEeeEEcCCCceeEeCCCCCCcccc
Confidence 45777777777777777777643 455566666777777777775422 34444410000001
Q ss_pred cEEeEEEEcEEEeC
Q 017991 289 RIHDIMVYGALISN 302 (362)
Q Consensus 289 ~v~ni~i~n~~i~~ 302 (362)
.-.+|+|.+|.+.+
T Consensus 262 g~~~vT~h~N~f~~ 275 (399)
T 2o04_A 262 GKLKITLHHNRYKN 275 (399)
T ss_dssp TCCCEEEESCEEEE
T ss_pred CceeEEEECcEecC
Confidence 12356666666654
No 60
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=98.14 E-value=8.6e-06 Score=75.89 Aligned_cols=120 Identities=11% Similarity=0.082 Sum_probs=82.4
Q ss_pred EEEEeecceEEEceEEeeCCCceeEEe-ceeeEEEEeEEEECCCCCCCCCeeeec-----CccCEEEEeeEEecC-----
Q 017991 182 ITFHKCKNLKVQNLRVVNSQQMHIAFT-NCLRVVISNLEVIAPAESPNTDGIHIS-----ASRGVEVKNSIVGTG----- 250 (362)
Q Consensus 182 i~~~~~~nv~I~~v~i~n~~~~~i~~~-~~~nv~i~n~~I~~~~~~~~~DGI~~~-----~s~nv~I~n~~i~~g----- 250 (362)
+.+.-.+|.+|.+-+.. -.+.++.+. .++||.|+|++|+........|+|.+. .++||.|++|.+..+
T Consensus 66 ~~l~v~sn~TI~G~~a~-i~g~gl~i~~~~~NVIIrnl~i~~~~~~~~~DaI~i~g~~~~~s~nVWIDH~s~s~~~~~~~ 144 (330)
T 2qy1_A 66 VQIKNKSDVTIKGANGS-AANFGIRVVGNAHNVIIQNMTIGLLQGGEDADSISLEGNSSGEPSKIWVDHNTVFASLTKCS 144 (330)
T ss_dssp EEEESCCSEEEEECTTC-BBSSEEEEESSCEEEEEESCEEESCSSGGGCCSEEEECBTTBCCEEEEEESCEEECCCCCCT
T ss_pred eEEEcCCCeEEECCCcE-EeeeeEEEeCCCCeEEEeCeEEeCCCCCCCCcceeeccccCcccccEEEEeEEEEccccccc
Confidence 34444566776442211 124578888 899999999999975432368999998 599999999999643
Q ss_pred -------CccEEEcCCceeEEEEeeEEcCCc-eeEEeecCCCCCcccEEeEEEEcEEEeCC
Q 017991 251 -------DDCISIVGNSSLIRIRNFACGPGH-GISIGSLGKSNSSVRIHDIMVYGALISNT 303 (362)
Q Consensus 251 -------dD~i~i~s~~~ni~i~n~~~~~~~-gi~igs~g~~~~~~~v~ni~i~n~~i~~~ 303 (362)
|..+.++.++.+|+|+||+|.... ++-+|+.-. .......+|++.+|.+.++
T Consensus 145 ~~~~~~~Dg~idi~~~s~~VTISnn~f~~h~k~~L~G~sd~-~~~~~~~~vT~h~N~f~~~ 204 (330)
T 2qy1_A 145 GAGDASFDGGIDMKKGVHHVTVSYNYVYNYQKVALNGYSDS-DTKNSAARTTYHHNRFENV 204 (330)
T ss_dssp TCTTCSSCCSEEEESSCEEEEEESCEEEEEEECCEESSSTT-CGGGGGCEEEEESCEEEEE
T ss_pred cCCcceeecccccccCcceEEEEcceeccCCeEEEECCCCc-cccCCCceEEEECcEEcCC
Confidence 556788888999999999996432 455665210 0111225788888888764
No 61
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=98.08 E-value=4.7e-05 Score=71.15 Aligned_cols=137 Identities=13% Similarity=0.188 Sum_probs=86.0
Q ss_pred EEEEeecceEEEceEEeeCCC------------------c--eeE-EeceeeEEEEeEEEECCCCCCCCCeeeecCccCE
Q 017991 182 ITFHKCKNLKVQNLRVVNSQQ------------------M--HIA-FTNCLRVVISNLEVIAPAESPNTDGIHISASRGV 240 (362)
Q Consensus 182 i~~~~~~nv~I~~v~i~n~~~------------------~--~i~-~~~~~nv~i~n~~I~~~~~~~~~DGI~~~~s~nv 240 (362)
+.+ .+++++++|++|+|... - .+. -..++++.+.+|+|.+ ..|.+..... +.
T Consensus 91 v~v-~a~~f~a~nlt~~Nt~~~~~~~~~~~~~~~~~~~~QAvAl~v~v~~d~~~f~~c~f~G-----~QDTLy~~~g-r~ 163 (342)
T 2nsp_A 91 ITI-SAKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVTKSGDRAYFKDVSLVG-----YQATLYVSGG-RS 163 (342)
T ss_dssp EEE-CSBSCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCBSEEEEEEEEEC-----STTCEEECSS-EE
T ss_pred EEE-ECCCEEEEeeEEEccccccccccccccCCccccCCceEEEEEeeccCcEEEEeeEEec-----ccceEEECCC-CE
Confidence 444 48999999999999751 1 232 2468999999999998 5677887754 78
Q ss_pred EEEeeEEecCCccEEEcCCceeEEEEeeEEcCC--------c--e-eEEeecCCCCCcccEEeEEEEcEEEeCCce----
Q 017991 241 EVKNSIVGTGDDCISIVGNSSLIRIRNFACGPG--------H--G-ISIGSLGKSNSSVRIHDIMVYGALISNTQN---- 305 (362)
Q Consensus 241 ~I~n~~i~~gdD~i~i~s~~~ni~i~n~~~~~~--------~--g-i~igs~g~~~~~~~v~ni~i~n~~i~~~~~---- 305 (362)
.+++|+|...-|=| ++. -...++||++..- . | |.--+ .....-....|.||+|.+...
T Consensus 164 ~~~~c~I~G~vDFI-FG~--a~a~f~~c~i~~~~~~~~~~~~~~g~ItA~~----~~~~~~~G~vf~~c~i~~~~~~~~~ 236 (342)
T 2nsp_A 164 FFSDCRISGTVDFI-FGD--GTALFNNCDLVSRYRADVKSGNVSGYLTAPS----TNINQKYGLVITNSRVIRESDSVPA 236 (342)
T ss_dssp EEESCEEEESEEEE-EES--SEEEEESCEEEECCCTTSCTTSCCEEEEEEC----CBTTCSCCEEEESCEEEESSTTSCT
T ss_pred EEEcCEEEeceEEE-eCC--ceEEEecCEEEEecCcccccccCceEEEccC----CCCCCCCEEEEEcCEEecCCCCCcc
Confidence 99999999654432 333 3578999987421 0 3 22222 112233568999999986521
Q ss_pred e-EEE-EeeCCC----------CceEEeEEEEeEEEecC
Q 017991 306 G-VRI-KTWQGG----------SGSATNIQFLDVLMKNV 332 (362)
Q Consensus 306 g-i~i-~~~~g~----------~g~i~ni~~~ni~~~~~ 332 (362)
+ ..+ +.|... +-.+..++|.+..|.+.
T Consensus 237 ~~~yLGRpW~~~s~~~~~~~a~p~~~~r~vf~~t~~~~~ 275 (342)
T 2nsp_A 237 KSYGLGRPWHPTTTFSDGRYADPNAIGQTVFLNTSMDNH 275 (342)
T ss_dssp TCEEEECCCCCEEEETTEEEECTTBCCEEEEESCEECTT
T ss_pred ccEEEEeccccccccccccccCCccceeEEEEccccCcc
Confidence 1 222 123211 01123788888888775
No 62
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=98.01 E-value=7.7e-05 Score=70.12 Aligned_cols=105 Identities=14% Similarity=0.154 Sum_probs=76.1
Q ss_pred ecceEEEce----EEeeCCCceeEEe-ceeeEEEEeEEEECCC--CCCCCCeeeecCccCEEEEeeEEec-CCccEEE-c
Q 017991 187 CKNLKVQNL----RVVNSQQMHIAFT-NCLRVVISNLEVIAPA--ESPNTDGIHISASRGVEVKNSIVGT-GDDCISI-V 257 (362)
Q Consensus 187 ~~nv~I~~v----~i~n~~~~~i~~~-~~~nv~i~n~~I~~~~--~~~~~DGI~~~~s~nv~I~n~~i~~-gdD~i~i-~ 257 (362)
.+|.+|.+. .|. +.++.+. .++||.|+|++|+... .....|+|.+..+++|.|++|.+.. +|..+.. .
T Consensus 107 ~snkTI~G~G~~~~i~---G~gl~i~~~a~NVIIrnL~i~~~~~~~~~g~DaI~i~~s~nVwIDHcs~s~~~d~~~~~g~ 183 (359)
T 1idk_A 107 TSNKSLIGEGSSGAIK---GKGLRIVSGAENIIIQNIAVTDINPKYVWGGDAITLDDCDLVWIDHVTTARIGRQHYVLGT 183 (359)
T ss_dssp CSSEEEEECTTTCEEE---SCCEEECTTCEEEEEESCEEEEECTTEETSCCSEEECSCEEEEEESCEEEEESSCSEEECC
T ss_pred CCCceEEEecCCeEEe---cceEEEecCCCcEEEeCeEEEcccccccccCCceeecCCCcEEEEeeEeecCCCCcEEecc
Confidence 356666554 333 3457776 7999999999999732 1236799999999999999999986 5666665 4
Q ss_pred CCceeEEEEeeEEcCC----------c--eeEE-eecCCCCCcccEEeEEEEcEEEeCC
Q 017991 258 GNSSLIRIRNFACGPG----------H--GISI-GSLGKSNSSVRIHDIMVYGALISNT 303 (362)
Q Consensus 258 s~~~ni~i~n~~~~~~----------~--gi~i-gs~g~~~~~~~v~ni~i~n~~i~~~ 303 (362)
.++++|+|+||+|.+. | +..+ |+ . .+|+|.+|.+.+.
T Consensus 184 ~~s~~VTISnn~f~~~~~~s~~~~G~h~~~~~L~G~----s-----d~vT~hhN~f~~~ 233 (359)
T 1idk_A 184 SADNRVSLTNNYIDGVSDYSATCDGYHYWAIYLDGD----A-----DLVTMKGNYIYHT 233 (359)
T ss_dssp CTTCEEEEESCEEECBCSCBTTSSSBBSCCEEECCS----S-----CEEEEESCEEESB
T ss_pred cCcceEEEECcEecCCcccccccCccccceEEEEec----C-----CCeEEEceEeecC
Confidence 5689999999999642 1 2222 22 1 3899999999875
No 63
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=97.99 E-value=7.2e-05 Score=71.21 Aligned_cols=90 Identities=11% Similarity=0.132 Sum_probs=63.6
Q ss_pred EEEEEeecceEEEceEEeeC-------------------CCceeEEeceeeEEEEeEEEECCCCC------------CCC
Q 017991 181 AITFHKCKNLKVQNLRVVNS-------------------QQMHIAFTNCLRVVISNLEVIAPAES------------PNT 229 (362)
Q Consensus 181 ~i~~~~~~nv~I~~v~i~n~-------------------~~~~i~~~~~~nv~i~n~~I~~~~~~------------~~~ 229 (362)
.|.+.. +||.|++++|++. ....|.+..+++|-|++|++....+. .-.
T Consensus 144 gl~i~~-~NVIIrnl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~G~~~~~~ 222 (399)
T 2o04_A 144 NFQIKS-DNVIIRNIEFQDAYDYFPQWDPTDGSSGNWNSQYDNITINGGTHIWIDHCTFNDGSRPDSTSPKYYGRKYQHH 222 (399)
T ss_dssp EEEECS-EEEEEESCEEECCCCSSCEEETTSSTTCEEECCCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCCC
T ss_pred EEEeeC-CCEEEeCeEEecCccccccccccccccccccCCCCeEEecCCCcEEEEeeeeecCCCccccccccccceeecc
Confidence 477777 8999999999753 13458888999999999999853210 124
Q ss_pred Ce-eeec-CccCEEEEeeEEecCCccEEEcCC--------ceeEEEEeeEEc
Q 017991 230 DG-IHIS-ASRGVEVKNSIVGTGDDCISIVGN--------SSLIRIRNFACG 271 (362)
Q Consensus 230 DG-I~~~-~s~nv~I~n~~i~~gdD~i~i~s~--------~~ni~i~n~~~~ 271 (362)
|| |++. .+.+|||++|+|...+-+.-+++. ..+|++.+|.|.
T Consensus 223 Dgl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~g~~~vT~h~N~f~ 274 (399)
T 2o04_A 223 DGQTDASNGANYITMSYNYYHDHDKSSIFGSSDSKTSDDGKLKITLHHNRYK 274 (399)
T ss_dssp CCSEEEETTCEEEEEESCEEEEEEECCEESCCTTCGGGTTCCCEEEESCEEE
T ss_pred ccceeeeccCCcEEEEeeEEcCCCceeEeCCCCCCccccCceeEEEECcEec
Confidence 66 4665 688999999999875555544442 127888888775
No 64
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=97.97 E-value=0.00056 Score=63.24 Aligned_cols=97 Identities=15% Similarity=0.194 Sum_probs=72.7
Q ss_pred eeEEeceeeEEEEeEEEECCCCCCCCCeeeecC-ccCEEEEeeEEec----------CCccEEEcCCceeEEEEeeEEcC
Q 017991 204 HIAFTNCLRVVISNLEVIAPAESPNTDGIHISA-SRGVEVKNSIVGT----------GDDCISIVGNSSLIRIRNFACGP 272 (362)
Q Consensus 204 ~i~~~~~~nv~i~n~~I~~~~~~~~~DGI~~~~-s~nv~I~n~~i~~----------gdD~i~i~s~~~ni~i~n~~~~~ 272 (362)
++.+..++||.|+|++|+... ....|+|.+.. ++||.|++|.+.. .|..+.++.++.+|+|+||+|..
T Consensus 96 gl~i~~a~NVIIrNl~i~~~~-~~~~DaI~i~~~s~nVWIDH~s~s~~~~g~~~~~~~Dgl~di~~~s~~VTISnn~f~~ 174 (326)
T 3vmv_A 96 GIRLSNAHNIIIQNVSIHHVR-EGEGTAIEVTDDSKNVWIDHNEFYSEFPGNGDSDYYDGLVDMKRNAEYITVSWNKFEN 174 (326)
T ss_dssp CEEEESEEEEEEESCEEECCC-STTSCSEEEETTCEEEEEESCEEECCSSTTSCTTSSCCSEEECTTCEEEEEESCEEEE
T ss_pred EEEEEecceEEEECeEEEcCC-CCCCCeEEEecCCCcEEEEeeEEeccccCCcCccccCcceEecCCCceEEEEceEEec
Confidence 455667999999999999754 34689999996 8999999999963 36678888889999999999975
Q ss_pred C-ceeEEeecCCCCCcccEEeEEEEcEEEeCC
Q 017991 273 G-HGISIGSLGKSNSSVRIHDIMVYGALISNT 303 (362)
Q Consensus 273 ~-~gi~igs~g~~~~~~~v~ni~i~n~~i~~~ 303 (362)
- .+.-+|+.- .....-.+|++.+|.+.++
T Consensus 175 h~k~~LiG~sd--~~~~~~~~vT~~~N~f~~~ 204 (326)
T 3vmv_A 175 HWKTMLVGHTD--NASLAPDKITYHHNYFNNL 204 (326)
T ss_dssp EEECEEECSSS--CGGGCCEEEEEESCEEEEE
T ss_pred CceEEEECCCC--CCcccCccEEEEeeEecCC
Confidence 2 246666521 0011125788888888764
No 65
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=97.91 E-value=7e-05 Score=71.64 Aligned_cols=91 Identities=11% Similarity=0.162 Sum_probs=66.3
Q ss_pred EEEEEeecceEEEceEEeeC-------------------CCceeEEeceeeEEEEeEEEECCCCC------------CCC
Q 017991 181 AITFHKCKNLKVQNLRVVNS-------------------QQMHIAFTNCLRVVISNLEVIAPAES------------PNT 229 (362)
Q Consensus 181 ~i~~~~~~nv~I~~v~i~n~-------------------~~~~i~~~~~~nv~i~n~~I~~~~~~------------~~~ 229 (362)
.|.+..++||.|++|+|++. ...+|.+..+++|-|++|++....+. .-.
T Consensus 149 gl~i~~~~NVIIrNl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~Gr~~~~~ 228 (416)
T 1vbl_A 149 GFLIKNVDNVIIRNIEFEAPLDYFPEWDPTDGTLGEWNSEYDSISIEGSSHIWIDHNTFTDGDHPDRSLGTYFGRPFQQH 228 (416)
T ss_dssp EEEEESCEEEEEESCEEECCCCSSCEEETTSTTTCEEECCCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCCC
T ss_pred EEEeecCceEEEeCeEEEcCccccccccccccccccccCCCceEEecCCceEEEEccEEecCCCcccccccccCcceeec
Confidence 47888899999999999863 23468899999999999999863210 124
Q ss_pred Ce-eeec-CccCEEEEeeEEecCCccEEEcCC--------ceeEEEEeeEEc
Q 017991 230 DG-IHIS-ASRGVEVKNSIVGTGDDCISIVGN--------SSLIRIRNFACG 271 (362)
Q Consensus 230 DG-I~~~-~s~nv~I~n~~i~~gdD~i~i~s~--------~~ni~i~n~~~~ 271 (362)
|| +++. .+++|||++|+|...+-+.-+++. .-+|++.+|.|.
T Consensus 229 DGl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~g~~~VT~hhN~f~ 280 (416)
T 1vbl_A 229 DGALDIKNSSDFITISYNVFTNHDKVTLIGASDSRMADSGHLRVTLHHNYYK 280 (416)
T ss_dssp CCSEEEESSCEEEEEESCEEEEEEECCEECSCTTCGGGTTCCCEEEESCEEE
T ss_pred ccceeeecCCCcEEEEeeEEcCCCceeEeCCCCCCcccCCceEEEEECcEec
Confidence 66 5565 689999999999975555444432 125788877774
No 66
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=97.89 E-value=0.00014 Score=68.33 Aligned_cols=104 Identities=16% Similarity=0.102 Sum_probs=74.7
Q ss_pred cceEEEce----EEeeCCCceeEEe-ceeeEEEEeEEEECCCC--CCCCCeeeecCccCEEEEeeEEecC-CccEE-EcC
Q 017991 188 KNLKVQNL----RVVNSQQMHIAFT-NCLRVVISNLEVIAPAE--SPNTDGIHISASRGVEVKNSIVGTG-DDCIS-IVG 258 (362)
Q Consensus 188 ~nv~I~~v----~i~n~~~~~i~~~-~~~nv~i~n~~I~~~~~--~~~~DGI~~~~s~nv~I~n~~i~~g-dD~i~-i~s 258 (362)
+|.+|.+. +|. +.++.+. .++||.|+|++|+.... ....|+|.+..+++|.|++|.+... |..+. ...
T Consensus 108 snkTI~G~g~~~~I~---G~gl~i~~~a~NVIIrnl~i~~~~~~~~~~~DaI~i~~s~nvwIDHcs~s~~~d~~~~~~~~ 184 (359)
T 1qcx_A 108 SNKSIVGQGTKGVIK---GKGLRVVSGAKNVIIQNIAVTDINPKYVWGGDAITVDDSDLVWIDHVTTARIGRQHIVLGTS 184 (359)
T ss_dssp SSEEEEECTTCCEEE---SCCEEEETTCCCEEEESCEEEEECTTEETSCCSEEEESCCCEEEESCEEEEESSCSEEECSS
T ss_pred CCceEEecCCceEEe---cceEEEecCCCCEEEeCcEEEecCCcccccCceeEecCCceEEEEeeEeeccCcCceeeccc
Confidence 45555553 343 2356776 89999999999996432 2357999999999999999999864 55553 345
Q ss_pred CceeEEEEeeEEcCC----------c--e-eEEeecCCCCCcccEEeEEEEcEEEeCC
Q 017991 259 NSSLIRIRNFACGPG----------H--G-ISIGSLGKSNSSVRIHDIMVYGALISNT 303 (362)
Q Consensus 259 ~~~ni~i~n~~~~~~----------~--g-i~igs~g~~~~~~~v~ni~i~n~~i~~~ 303 (362)
++++|+|+||+|.+. | + +-+|+ -.++++++|.+.+.
T Consensus 185 ~s~~vTISnn~f~~~~~~s~~~~G~H~~~~~l~G~---------sd~vT~~~N~f~~~ 233 (359)
T 1qcx_A 185 ADNRVTISYSLIDGRSDYSATCNGHHYWGVYLDGS---------NDMVTLKGNYFYNL 233 (359)
T ss_dssp CCEEEEEESCEEECBCSSBTTSSSBBSCCEEECCS---------SEEEEEESCEEESB
T ss_pred ccccEEEECcEecCCccccccCcccccceeEEecC---------CCCeehcccEeccC
Confidence 689999999999742 3 2 22232 14899999999875
No 67
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=97.87 E-value=0.0003 Score=65.94 Aligned_cols=100 Identities=17% Similarity=0.226 Sum_probs=72.1
Q ss_pred eeEEeceeeEEEEeEEEECCCC-----------CCCCCeeeecCccCEEEEeeEEecC------------------CccE
Q 017991 204 HIAFTNCLRVVISNLEVIAPAE-----------SPNTDGIHISASRGVEVKNSIVGTG------------------DDCI 254 (362)
Q Consensus 204 ~i~~~~~~nv~i~n~~I~~~~~-----------~~~~DGI~~~~s~nv~I~n~~i~~g------------------dD~i 254 (362)
++.+..++||.|+|++|+...+ ....|+|.+.+++||.|++|.|..+ |..+
T Consensus 97 gl~i~~~~NVIIrnl~i~~~~~~~p~~~~~~g~~~~~DaI~i~~s~nVWIDH~s~s~~~~~d~~~~~~~G~~~~~~Dgl~ 176 (355)
T 1pcl_A 97 SLVIKGVKNVILRNLYIETPVDVAPHYESGDGWNAEWDAAVIDNSTNVWVDHVTISDGSFTDDKYTTKDGEKYVQHDGAL 176 (355)
T ss_pred EEEEecCCeEEEeeeEEEcCcccccccccccCccccCceEEecCCCcEEEEeeEEeccccCccccccccCccccccccce
Confidence 4555678999999999996421 1347999999999999999999864 5556
Q ss_pred EEcCCceeEEEEeeEEcCCc-eeEEeecCCCC-CcccEEeEEEEcEEEeCC
Q 017991 255 SIVGNSSLIRIRNFACGPGH-GISIGSLGKSN-SSVRIHDIMVYGALISNT 303 (362)
Q Consensus 255 ~i~s~~~ni~i~n~~~~~~~-gi~igs~g~~~-~~~~v~ni~i~n~~i~~~ 303 (362)
.++.++++|+|+||+|.... +.-+|+.-... ......+|++.+|.+.++
T Consensus 177 Di~~~s~~VTiS~n~f~~h~k~~LiG~sd~~~~~d~g~~~vT~hhN~f~~~ 227 (355)
T 1pcl_A 177 DIKKGSDYVTISYSRFELHDKTILIGHSDSNGSQDSGKLRVTFHNNVFDRV 227 (355)
T ss_pred eeecCCCcEEEEeeEEcCCCceEEeCCCCCCcccccCcceEEEECcEEeCC
Confidence 67777899999999997643 46666621100 011345799999999775
No 68
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=97.79 E-value=9.4e-05 Score=70.71 Aligned_cols=109 Identities=9% Similarity=0.004 Sum_probs=82.0
Q ss_pred EEEEEeecceEEEceEEeeCCCceeEEeceeeEEEEeEEEECCCCCCCCCeeeecCc-cCEEEEeeEEecC---------
Q 017991 181 AITFHKCKNLKVQNLRVVNSQQMHIAFTNCLRVVISNLEVIAPAESPNTDGIHISAS-RGVEVKNSIVGTG--------- 250 (362)
Q Consensus 181 ~i~~~~~~nv~I~~v~i~n~~~~~i~~~~~~nv~i~n~~I~~~~~~~~~DGI~~~~s-~nv~I~n~~i~~g--------- 250 (362)
.|.+ ...+++|++++|.+....+|.+.. .+.+|++|+|+.. ...||.+... .+.+|++|++...
T Consensus 109 ~i~i-~~~~~~i~gl~I~n~g~~GI~v~g-s~~~i~n~~i~~n----~~~GI~l~~~~s~n~I~nn~i~~N~d~~~~g~~ 182 (400)
T 1ru4_A 109 GFYV-TGDYWYFKGVEVTRAGYQGAYVIG-SHNTFENTAFHHN----RNTGLEINNGGSYNTVINSDAYRNYDPKKNGSM 182 (400)
T ss_dssp SEEE-CSSCEEEESEEEESCSSCSEEECS-SSCEEESCEEESC----SSCSEEECTTCCSCEEESCEEECCCCTTTTTSS
T ss_pred EEEE-ECCeEEEEeEEEEeCCCCcEEEeC-CCcEEEeEEEECC----CceeEEEEcccCCeEEEceEEEcccCccccCcc
Confidence 3655 689999999999998777888776 6789999999982 3349999864 4899999999764
Q ss_pred CccEEEcCC-ceeEEEEeeEEcCC--ceeEEeecCCCCCcccEEeEEEEcEEEeCC
Q 017991 251 DDCISIVGN-SSLIRIRNFACGPG--HGISIGSLGKSNSSVRIHDIMVYGALISNT 303 (362)
Q Consensus 251 dD~i~i~s~-~~ni~i~n~~~~~~--~gi~igs~g~~~~~~~v~ni~i~n~~i~~~ 303 (362)
.|+++++.. .++.+|++|+++.. .|+.+.. ....++|+||...+.
T Consensus 183 ~dG~~~~~~~g~Gn~~~~~~~~~N~ddGidl~~--------~~~~v~i~nn~a~~N 230 (400)
T 1ru4_A 183 ADGFGPKQKQGPGNRFVGCRAWENSDDGFDLFD--------SPQKVVIENSWAFRN 230 (400)
T ss_dssp CCSEEECTTCCSCCEEESCEEESCSSCSEECTT--------CCSCCEEESCEEEST
T ss_pred cceEEEEecccCCeEEECCEEeecCCCcEEEEe--------cCCCEEEEeEEEECC
Confidence 268888742 36778999998754 4666532 223578999988764
No 69
>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12}
Probab=97.74 E-value=0.0015 Score=61.92 Aligned_cols=140 Identities=13% Similarity=0.148 Sum_probs=82.9
Q ss_pred EEEeecceEEEceEEeeCCCc--------ee-EEeceeeEEEEeEEEECCCCCCCCCeeeec-----------CccCEEE
Q 017991 183 TFHKCKNLKVQNLRVVNSQQM--------HI-AFTNCLRVVISNLEVIAPAESPNTDGIHIS-----------ASRGVEV 242 (362)
Q Consensus 183 ~~~~~~nv~I~~v~i~n~~~~--------~i-~~~~~~nv~i~n~~I~~~~~~~~~DGI~~~-----------~s~nv~I 242 (362)
....++++.++||+|.|.... .+ .-..++...+.+|+|.+.. |-+... ....-..
T Consensus 196 ~~V~g~~F~a~niTf~Ntag~~~~~~~~QAVAL~v~gDr~~fy~C~f~G~Q-----DTLy~~~~~~~~~~~~d~~gRqyy 270 (422)
T 3grh_A 196 FWSQNNGLQLQNLTIENTLGDSVDAGNHPAVALRTDGDQVQINNVNILGRQ-----NTFFVTNSGVQNRLETNRQPRTLV 270 (422)
T ss_dssp EEECCTTCEEEEEEEEETTGGGSCSSCCCCCSEEECCSSEEEEEEEEECST-----TCEEECCCCTTCSCCSSCCCEEEE
T ss_pred EEEECCCEEEEeeEEEeCCCCCCCCCCCceEEEEecCCcEEEEeeEEEeec-----ceeeeccccccccccccccccEEE
Confidence 344589999999999996432 11 2246788889999998843 334332 2346788
Q ss_pred EeeEEecCCccEEEcCCceeEEEEeeEEcC--C----ce-eEEeecCCCCCcccEEeEEEEcEEEeCCcee-EEE-EeeC
Q 017991 243 KNSIVGTGDDCISIVGNSSLIRIRNFACGP--G----HG-ISIGSLGKSNSSVRIHDIMVYGALISNTQNG-VRI-KTWQ 313 (362)
Q Consensus 243 ~n~~i~~gdD~i~i~s~~~ni~i~n~~~~~--~----~g-i~igs~g~~~~~~~v~ni~i~n~~i~~~~~g-i~i-~~~~ 313 (362)
++|+|...=|=| ++. -...++||.+.. . .| +.-.+ .....-....|.||+|.....+ ..+ +.|.
T Consensus 271 ~~CyIeGtVDFI-FG~--a~AvFe~C~I~s~~~~~~~~g~ITA~~----t~~~~~~Gfvf~nC~ita~~~~~~yLGRPW~ 343 (422)
T 3grh_A 271 TNSYIEGDVDIV-SGR--GAVVFDNTEFRVVNSRTQQEAYVFAPA----TLSNIYYGFLAVNSRFNAFGDGVAQLGRSLD 343 (422)
T ss_dssp ESCEEEESEEEE-EES--SEEEEESCEEEECCSSCSSCCEEEEEC----CBTTCCCCEEEESCEEEECSSSCBEEEEEEC
T ss_pred EecEEeccccEE-ccC--ceEEEEeeEEEEecCCCCCceEEEecC----CCCCCCCEEEEECCEEEeCCCCCEEcCCCCC
Confidence 888888654433 232 367888887752 1 23 33332 1222345678888988843222 222 3454
Q ss_pred CCCceEEeEEEEeEEEecCCc
Q 017991 314 GGSGSATNIQFLDVLMKNVSN 334 (362)
Q Consensus 314 g~~g~i~ni~~~ni~~~~~~~ 334 (362)
..+...-.|+|.|..|.+.=.
T Consensus 344 ~ysrt~~qVVf~~s~l~~~I~ 364 (422)
T 3grh_A 344 VDANTNGQVVIRDSAINEGFN 364 (422)
T ss_dssp CSTTBCCEEEEESCEECTTBC
T ss_pred CcCCcCccEEEEeCcccCccC
Confidence 332233458888888887633
No 70
>2vbk_A Tailspike-protein; viral adhesion protein, viral protein, hydrolase, endorhamnosidase, right-handed parallel beta-helix; 1.25A {Enterobacteria phage SF6} PDB: 2vbe_A 2vbm_A*
Probab=97.31 E-value=0.00069 Score=64.12 Aligned_cols=69 Identities=14% Similarity=0.166 Sum_probs=52.0
Q ss_pred EEEEeecceEEE-ceEEeeCCCceeEEeceeeEEEEeEEEECCCCCCCCCeeeecC------------ccCEEEEeeEEe
Q 017991 182 ITFHKCKNLKVQ-NLRVVNSQQMHIAFTNCLRVVISNLEVIAPAESPNTDGIHISA------------SRGVEVKNSIVG 248 (362)
Q Consensus 182 i~~~~~~nv~I~-~v~i~n~~~~~i~~~~~~nv~i~n~~I~~~~~~~~~DGI~~~~------------s~nv~I~n~~i~ 248 (362)
+++..|++++++ ++.+. .+|+||.|.||.|.. ..|.|.+.+ |+++.
T Consensus 198 IhPi~Cqnvt~r~gL~f~---------eSCrNV~IsnC~FsV-----GDdciaiksGk~~~~~~~~~~se~~~------- 256 (514)
T 2vbk_A 198 SKFIACQAGTCRVGLHFL---------GQCVSVSVSSCHFSR-----GNYSADESFGIRIQPQTYAWSSEAVR------- 256 (514)
T ss_dssp EEEESCEEEEEEEEEEEE---------SCCEEEEEESCEEEC-----TTSCCTTCEEEEEECBCCTTTSSCBC-------
T ss_pred EeEeccCceecccCcccc---------CCCCeEEEeccEEec-----CcceeeeecCceecccccCCcchhcc-------
Confidence 888889999987 66664 379999999999998 445555443 66665
Q ss_pred cCCccEEEcCC-----cee-EEEEeeEEcCC
Q 017991 249 TGDDCISIVGN-----SSL-IRIRNFACGPG 273 (362)
Q Consensus 249 ~gdD~i~i~s~-----~~n-i~i~n~~~~~~ 273 (362)
+.+|.++|. .+| ++|++|.|..+
T Consensus 257 --hgav~igSE~m~~Gvk~~v~v~~Clf~~t 285 (514)
T 2vbk_A 257 --SEAIILDSETMCIGFKNAVYVHDCLDLHM 285 (514)
T ss_dssp --CEEEEEESSEEEESCSEEEEESCCEEEEE
T ss_pred --cccEEECchhhcccccccEEEEeeeccCC
Confidence 566777764 578 99999988654
No 71
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=97.21 E-value=0.0014 Score=61.50 Aligned_cols=91 Identities=18% Similarity=0.294 Sum_probs=61.0
Q ss_pred ceeeEEEEeEEEECCCCC-----------CCCCeeeecC-ccCEEEEeeEEecC------------------CccEEEcC
Q 017991 209 NCLRVVISNLEVIAPAES-----------PNTDGIHISA-SRGVEVKNSIVGTG------------------DDCISIVG 258 (362)
Q Consensus 209 ~~~nv~i~n~~I~~~~~~-----------~~~DGI~~~~-s~nv~I~n~~i~~g------------------dD~i~i~s 258 (362)
.++||.|+|++|+...+. ...|+|.+.. ++||.|++|.+..+ |..+.++.
T Consensus 112 ~~~NVIIrNl~i~~~~d~~p~~~~~~g~~~~~DaI~i~~~s~nVWIDHcs~s~~~~~~~~~~~~~G~~~~~~DgllDi~~ 191 (361)
T 1pe9_A 112 GTNNVIIRNVYIQTPIDVEPHYEKGDGWNAEWDAMNITNGAHHVWIDHVTISDGNFTDDMYTTKDGETYVQHDGALDIKR 191 (361)
T ss_dssp TCEEEEEESCEEECCCCSSCEEETTTEEECCCCSEEEETTCEEEEEESCEEECTTSCGGGCCEETTEECCCCCCSEEECT
T ss_pred CCceEEEeCeEEEcCcccccccccccCcccCCceEEeecCCceEEEEccEeecccccccccccccCcceeeccceeeeec
Confidence 467888888888864320 2478888888 88888888888753 66677777
Q ss_pred CceeEEEEeeEEcCC-ceeEEeecCCCCCcc-----cEEeEEEEcEEEeCC
Q 017991 259 NSSLIRIRNFACGPG-HGISIGSLGKSNSSV-----RIHDIMVYGALISNT 303 (362)
Q Consensus 259 ~~~ni~i~n~~~~~~-~gi~igs~g~~~~~~-----~v~ni~i~n~~i~~~ 303 (362)
++.+|+|+||+|..- .++-+|+- +.. .-..|++.+|.+.++
T Consensus 192 ~s~~VTiS~n~f~~h~k~~LiG~s----d~~~~~d~g~~~vT~hhN~f~~~ 238 (361)
T 1pe9_A 192 GSDYVTISNSLIDQHDKTMLIGHS----DSNGSQDKGKLHVTLFNNVFNRV 238 (361)
T ss_dssp TCEEEEEESCEEEEEEECEEESCC----TTCHHHHTTCCEEEEESCEEEEE
T ss_pred CCCcEEEEeeEEcCCCceeEecCC----CCCcccccCcceEEEECeEEcCc
Confidence 788888888888642 23555541 111 123677777777553
No 72
>3t9g_A Pectate lyase; PL3, parallel beta-helix; HET: GOL; 1.50A {Caldicellulosiruptor bescii}
Probab=96.97 E-value=0.085 Score=44.12 Aligned_cols=133 Identities=14% Similarity=0.140 Sum_probs=91.2
Q ss_pred ecceEEEceEEeeCCCceeEEeceeeEEEEeEEEECCCCCCCCCeeeecCccCEEEEeeEEecCCccEEEcCCceeEEEE
Q 017991 187 CKNLKVQNLRVVNSQQMHIAFTNCLRVVISNLEVIAPAESPNTDGIHISASRGVEVKNSIVGTGDDCISIVGNSSLIRIR 266 (362)
Q Consensus 187 ~~nv~I~~v~i~n~~~~~i~~~~~~nv~i~n~~I~~~~~~~~~DGI~~~~s~nv~I~n~~i~~gdD~i~i~s~~~ni~i~ 266 (362)
-...+|+|+.|-.+..-+||.. -+.+|+|++.... ..|.+.+.++..++|.+.-.++.+|=+.-..+...+.|+
T Consensus 51 e~GaTLkNvIIG~~~~dGIHC~--G~ctl~NVwwedV----cEDA~T~kg~g~~~I~GGgA~~A~DKV~Q~Ng~Gtv~I~ 124 (196)
T 3t9g_A 51 EKGANLKNVIIGAPGCDGIHCY--GDNVVENVVWEDV----GEDALTVKSEGVVEVIGGSAKEAADKVFQLNAPCTFKVK 124 (196)
T ss_dssp CTTCEEEEEEECSCCTTCEEEC--SSEEEEEEEESSC----CSCSEEECSSEEEEEESCEEEEEEEEEEEECSSEEEEEE
T ss_pred cCCCEEEEEEECCCCcCcEEEc--CCEeEEEEEeeee----eceeeEEcCCCeEEEECCCccCCCceEEEECCCceEEEe
Confidence 4688999999877777778775 3677999988874 678888887778888888888877766656666778888
Q ss_pred eeEEcCCceeEEeecCCCCCcccEEeEEEEcEEEeCCceeEEEEeeCCCCceEEeEEEEeEEEecCCc
Q 017991 267 NFACGPGHGISIGSLGKSNSSVRIHDIMVYGALISNTQNGVRIKTWQGGSGSATNIQFLDVLMKNVSN 334 (362)
Q Consensus 267 n~~~~~~~gi~igs~g~~~~~~~v~ni~i~n~~i~~~~~gi~i~~~~g~~g~i~ni~~~ni~~~~~~~ 334 (362)
|.+... .|--+-|-|. ...-++|.++|+++.+....+ +++.. .-..+++.|+++.++..
T Consensus 125 nF~~~~-~GKl~RSCGn---c~~~r~v~i~~v~~~n~k~~l-~rtdS----~~~~~~~~n~~~~~~~~ 183 (196)
T 3t9g_A 125 NFTATN-IGKLVRQNGN---TTFKVVIYLEDVTLNNVKSCV-AKSDS----PVSELWYHNLNVNNCKT 183 (196)
T ss_dssp EEEEEE-EEEEEEECTT---CCSCEEEEEEEEEEEEEEEEE-EECCC----TTCEEEEEEEEEEEEEE
T ss_pred eEEEcc-CCEEEEcCCC---CCceeEEEEeCeEEeCCEEEE-EEcCC----CCCEEEEecceecCCCc
Confidence 776642 3433333332 123489999999999875443 23321 23466777777777654
No 73
>1ee6_A Pectate lyase; parallel beta-helix, high-alkaline, low-molecular-weight; 2.30A {Bacillus SP} SCOP: b.80.1.1
Probab=96.82 E-value=0.067 Score=44.90 Aligned_cols=132 Identities=14% Similarity=0.130 Sum_probs=87.4
Q ss_pred ecceEEEceEEeeCCCceeEEeceeeEEEEeEEEECCCCCCCCCeeeecCccCEEEEeeEEecCCccEEEcCCceeEEEE
Q 017991 187 CKNLKVQNLRVVNSQQMHIAFTNCLRVVISNLEVIAPAESPNTDGIHISASRGVEVKNSIVGTGDDCISIVGNSSLIRIR 266 (362)
Q Consensus 187 ~~nv~I~~v~i~n~~~~~i~~~~~~nv~i~n~~I~~~~~~~~~DGI~~~~s~nv~I~n~~i~~gdD~i~i~s~~~ni~i~ 266 (362)
-...+|+|+.|-.+..-+||... +.+|+|++.... ..|.+.+.++..++|.+.-.++.+|=+.-..+...+.|+
T Consensus 47 e~GaTLkNvIIG~~~~dGIHC~G--~CtleNVwwedV----cEDA~T~k~~g~~~I~GGgA~~A~DKV~Q~Ng~Gtv~I~ 120 (197)
T 1ee6_A 47 EAGASLKNVVIGAPAADGVHCYG--DCTITNVIWEDV----GEDALTLKSSGTVNISGGAAYKAYDKVFQINAAGTINIR 120 (197)
T ss_dssp CTTEEEEEEEECSSCTTCEEEES--CEEEEEEEESSC----CSCSEEEEESEEEEEESCEEEEEEEEEEEECSSEEEEEE
T ss_pred cCCCEEEEEEEcCCCcccEEEcC--ceeEEEEEeeec----cccccEEcCCCeEEEECCCccCCCccEEEecCCceEEEe
Confidence 46788899888777777787753 577888888874 567788877667888888888776666555566677888
Q ss_pred eeEEcCCceeEEeecCCCCCcccEEeEEEEcEEEeCCceeEEEEeeCCCCceEEeEEEEeEEEecCC
Q 017991 267 NFACGPGHGISIGSLGKSNSSVRIHDIMVYGALISNTQNGVRIKTWQGGSGSATNIQFLDVLMKNVS 333 (362)
Q Consensus 267 n~~~~~~~gi~igs~g~~~~~~~v~ni~i~n~~i~~~~~gi~i~~~~g~~g~i~ni~~~ni~~~~~~ 333 (362)
|.... ..|=-+-|-|.- ..-++|.++|+++.+....|.....++ ..+++.|....++.
T Consensus 121 nF~~~-~~GKl~RScGnc---~~~r~v~i~~v~~~~~k~~i~~~ds~g-----dtati~n~~~~~v~ 178 (197)
T 1ee6_A 121 NFRAD-DIGKLVRQNGGT---TYKVVMNVENCNISRVKDAILRTDSST-----STGRIVNTRYSNVP 178 (197)
T ss_dssp SCEEE-EEEEEEEECTTC---CSCEEEEEESCEEEEEEEEEEECCCTT-----CEEEEESCEEESCS
T ss_pred eEEEc-cCCEEEEcCCCC---ccceEEEEeceEEECceEEEEEecCCC-----CEEEEEecccCCcc
Confidence 76553 233222232321 123899999999988765544433333 35566666666654
No 74
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=96.75 E-value=0.048 Score=50.20 Aligned_cols=114 Identities=9% Similarity=0.014 Sum_probs=80.7
Q ss_pred EeceeeEEEEeEEEECCCCC--CCCCeeeecCccCEEEEeeEEecCCccEEEcCCceeEEEEeeEEcCCceeEEeecCCC
Q 017991 207 FTNCLRVVISNLEVIAPAES--PNTDGIHISASRGVEVKNSIVGTGDDCISIVGNSSLIRIRNFACGPGHGISIGSLGKS 284 (362)
Q Consensus 207 ~~~~~nv~i~n~~I~~~~~~--~~~DGI~~~~s~nv~I~n~~i~~gdD~i~i~s~~~ni~i~n~~~~~~~gi~igs~g~~ 284 (362)
...+++++++|++|.+.... ..+-+|.+. ++++.++||.|...-|.+....+ + ..++||.+.+.-.+-+|.
T Consensus 90 ~v~a~~f~~~nlt~~Nt~g~~~~qAvAl~v~-~d~~~f~~c~f~g~QDTLy~~~~-r-~~~~~c~I~G~vDFIfG~---- 162 (319)
T 1gq8_A 90 AAVGAGFLARDITFQNTAGAAKHQAVALRVG-SDLSAFYRCDILAYQDSLYVHSN-R-QFFINCFIAGTVDFIFGN---- 162 (319)
T ss_dssp EECSTTCEEEEEEEEECCCGGGCCCCSEEEC-CTTEEEEEEEEECSTTCEEECSS-E-EEEESCEEEESSSCEEES----
T ss_pred EEECCCEEEEEeEeEccCCCcCCceEEEEec-CCcEEEEEeEECccceeeeecCc-c-EEEEecEEEeeeeEEecC----
Confidence 34588999999999986432 234567774 67999999999998888888773 4 499999998776677776
Q ss_pred CCcccEEeEEEEcEEEeCCc----eeEEEEeeC-CCCceEEeEEEEeEEEecCC
Q 017991 285 NSSVRIHDIMVYGALISNTQ----NGVRIKTWQ-GGSGSATNIQFLDVLMKNVS 333 (362)
Q Consensus 285 ~~~~~v~ni~i~n~~i~~~~----~gi~i~~~~-g~~g~i~ni~~~ni~~~~~~ 333 (362)
....|+||++.... ..-.|..+. .....-.++.|.|+++....
T Consensus 163 ------~~a~f~~c~i~~~~~~~~~~~~itA~~r~~~~~~~G~vf~~c~i~~~~ 210 (319)
T 1gq8_A 163 ------AAVVLQDCDIHARRPGSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATS 210 (319)
T ss_dssp ------CEEEEESCEEEECCCSTTCCEEEEEECCCSTTCCCEEEEESCEEEECT
T ss_pred ------CcEEEEeeEEEEecCCCCCceEEEeCCCCCCCCCceEEEECCEEecCC
Confidence 23789999986432 112333321 12345668999999998654
No 75
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=96.66 E-value=0.036 Score=50.98 Aligned_cols=113 Identities=6% Similarity=0.013 Sum_probs=80.5
Q ss_pred eceeeEEEEeEEEECCCCC--CCCCeeeecCccCEEEEeeEEecCCccEEEcCCceeEEEEeeEEcCCceeEEeecCCCC
Q 017991 208 TNCLRVVISNLEVIAPAES--PNTDGIHISASRGVEVKNSIVGTGDDCISIVGNSSLIRIRNFACGPGHGISIGSLGKSN 285 (362)
Q Consensus 208 ~~~~nv~i~n~~I~~~~~~--~~~DGI~~~~s~nv~I~n~~i~~gdD~i~i~s~~~ni~i~n~~~~~~~gi~igs~g~~~ 285 (362)
..+++++++|++|.+.... ..+-+|.+. ++++.++||.|...-|.+....+ ++ .++||.+++.-.+-+|.
T Consensus 87 v~a~~f~~~~lt~~Nt~g~~~~qAvAl~v~-~d~~~f~~c~f~g~QDTLy~~~~-r~-~~~~c~I~G~vDFIfG~----- 158 (317)
T 1xg2_A 87 AVGQGFILQDICIQNTAGPAKDQAVALRVG-ADMSVINRCRIDAYQDTLYAHSQ-RQ-FYRDSYVTGTVDFIFGN----- 158 (317)
T ss_dssp ECSTTCEEESCEEEECCCGGGCCCCSEEEC-CTTEEEESCEEECSTTCEEECSS-EE-EEESCEEEESSSCEEEC-----
T ss_pred EECCCEEEEEeEEecccCCccCceEEEEEe-CCcEEEEEeEeCccccceeecCc-cE-EEEeeEEEeceeEEcCC-----
Confidence 3688999999999986432 234567774 67999999999998888888773 44 99999998776777776
Q ss_pred CcccEEeEEEEcEEEeCCce----eEEEEeeC-CCCceEEeEEEEeEEEecCC
Q 017991 286 SSVRIHDIMVYGALISNTQN----GVRIKTWQ-GGSGSATNIQFLDVLMKNVS 333 (362)
Q Consensus 286 ~~~~v~ni~i~n~~i~~~~~----gi~i~~~~-g~~g~i~ni~~~ni~~~~~~ 333 (362)
....|+||++.-... .-.|..+. .....-.++.|.|+++....
T Consensus 159 -----~~avf~~c~i~~~~~~~~~~~~itA~~r~~~~~~~G~vf~~c~i~~~~ 206 (317)
T 1xg2_A 159 -----AAVVFQKCQLVARKPGKYQQNMVTAQGRTDPNQATGTSIQFCNIIASS 206 (317)
T ss_dssp -----CEEEEESCEEEECCCSTTCCEEEEEECCCCTTSCCEEEEESCEEEECT
T ss_pred -----ceEEEeeeEEEEeccCCCCccEEEecCcCCCCCCcEEEEECCEEecCC
Confidence 237899999864321 12233221 12345668999999998654
No 76
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=96.50 E-value=0.014 Score=57.17 Aligned_cols=147 Identities=8% Similarity=0.008 Sum_probs=96.0
Q ss_pred eEEEEE----eecceEEEceEEeeC-CCceeEEeceeeEEEEeEEEECCCCCCCCCeeeecCccCEEEEeeEEecCC---
Q 017991 180 TAITFH----KCKNLKVQNLRVVNS-QQMHIAFTNCLRVVISNLEVIAPAESPNTDGIHISASRGVEVKNSIVGTGD--- 251 (362)
Q Consensus 180 ~~i~~~----~~~nv~I~~v~i~n~-~~~~i~~~~~~nv~i~n~~I~~~~~~~~~DGI~~~~s~nv~I~n~~i~~gd--- 251 (362)
..+++. ...+.+|++-.+.+. ....+....+.+.+|++.++.. +..||.+..+++.+|+++.|....
T Consensus 216 e~iR~G~h~m~s~~~~VenN~f~~~~gg~aim~skS~~n~i~~N~~~~-----~~ggi~l~~~~~s~I~~N~f~gN~~~~ 290 (506)
T 1dbg_A 216 GGIRIGYYRNDIGRCLVDSNLFMRQDSEAEIITSKSQENVYYGNTYLN-----CQGTMNFRHGDHQVAINNFYIGNDQRF 290 (506)
T ss_dssp CSEEECSSTTCBCCCEEESCEEEEECSSSEEEEEESBSCEEESCEEES-----CSSEEEEEECSSCEEESCEEEECSSSS
T ss_pred ccEEEEEEecccCCcEEECCEEEeccCcEEEEEEecCCEEEECCEEEc-----ccCcEEEeecCccEEECCEEECCcCcc
Confidence 345554 357888888777764 3445666666678899888887 345788877778889988887643
Q ss_pred --ccEEEcCCceeEEEEeeEEcCCc--------eeEEeecCCCCCcccEEeEEEEcEEEeCCce-eEEEE----------
Q 017991 252 --DCISIVGNSSLIRIRNFACGPGH--------GISIGSLGKSNSSVRIHDIMVYGALISNTQN-GVRIK---------- 310 (362)
Q Consensus 252 --D~i~i~s~~~ni~i~n~~~~~~~--------gi~igs~g~~~~~~~v~ni~i~n~~i~~~~~-gi~i~---------- 310 (362)
.|+.+.. . +.+|+|++|.+.. |+.+..-.....-..+++++|++++|.++.. ||.+.
T Consensus 291 ~~~Gi~i~~-~-~~~I~nN~f~~~~g~~~~~~~GI~i~~G~~~~~~~~~~~~~I~~Ntfi~n~~~gI~~~~~~~~~~~~~ 368 (506)
T 1dbg_A 291 GYGGMFVWG-S-RHVIACNYFELSETIKSRGNAALYLNPGAMASEHALAFDMLIANNAFINVNGYAIHFNPLDERRKEYC 368 (506)
T ss_dssp CBCCEEECS-B-SCEEESCEEEESSBCGGGTSEEEEECCBCTTSTTCCCBSEEEESCEEESCSSEEEESSTTHHHHHHHH
T ss_pred CceEEEEEC-C-CCEEECCEEECCcCccccccccEEEecCCCccccccccCcEEECCEEECCccccEEEccccccccccc
Confidence 5677754 3 4489999887542 5555320000012356899999999999886 88887
Q ss_pred eeC-CCCceEEeEEEEeEEEecCC
Q 017991 311 TWQ-GGSGSATNIQFLDVLMKNVS 333 (362)
Q Consensus 311 ~~~-g~~g~i~ni~~~ni~~~~~~ 333 (362)
... .....=.|++|.|+.+.+.+
T Consensus 369 ~g~~~~~~~p~~~~~~nN~i~~~~ 392 (506)
T 1dbg_A 369 AANRLKFETPHQLMLKGNLFFKDK 392 (506)
T ss_dssp HHTTCCCBCCCSEEEESCEEECCS
T ss_pred ccccccccCCCcEEEEccEEEcCC
Confidence 111 11123457888888887764
No 77
>3b4n_A Endo-pectate lyase; pectin, galacturonic acid, right-handed parallel beta helix fold; 1.45A {Erwinia chrysanthemi} PDB: 3b8y_A* 3b90_A
Probab=95.71 E-value=0.49 Score=43.02 Aligned_cols=166 Identities=13% Similarity=0.061 Sum_probs=96.3
Q ss_pred EEEEeccEEecCCCeeeecccccCCCCCCCCCCeEEEEEeecceEEEceEEeeCCCceeEEeceeeEEEEeEEEECCCCC
Q 017991 147 LTVQGGGTINGMGQEWWSRSCKINTTNPCRHAPTAITFHKCKNLKVQNLRVVNSQQMHIAFTNCLRVVISNLEVIAPAES 226 (362)
Q Consensus 147 i~I~G~G~idG~G~~~~~~~~~~~~~~~~~~~~~~i~~~~~~nv~I~~v~i~n~~~~~i~~~~~~nv~i~n~~I~~~~~~ 226 (362)
-+|.| +++||.+.+| ...+... . ......|.+.. .-+|+++.|-.....+||... .+.+|+|+..+..
T Consensus 125 ~~i~g-~t~Dgg~k~~-~~~c~~q--~--E~q~~vF~le~--GatlkNvIiG~~~~dGIHC~~-G~CtleNVwwedV--- 192 (344)
T 3b4n_A 125 ATFEN-RTVDCGGVTI-GTSCPND--S--DKQKPLIILKN--ATVKNLRISASGGADGIHCDS-GNCTIENVIWEDI--- 192 (344)
T ss_dssp EEEES-SEEECTTCEE-CCCCCTT--C--SCCCCSEEEES--CEEEEEEECTTCCTTCEEEEE-SEEEEEEEEESSC---
T ss_pred eeEec-ceEcCCCcEE-CCCCCCc--c--ccCccEEEEcc--CcEEEEEEecCCCccceEEcc-CCeeEEEEeehhc---
Confidence 46666 6899998875 3222211 1 11233455553 578888888766677777651 2477889888874
Q ss_pred CCCCeeeecCccCEEEEeeEEecC-------CccEEEcCCceeEEEEe-eEEc-CCceeEEeecCCCCCcccEEeEEEEc
Q 017991 227 PNTDGIHISASRGVEVKNSIVGTG-------DDCISIVGNSSLIRIRN-FACG-PGHGISIGSLGKSNSSVRIHDIMVYG 297 (362)
Q Consensus 227 ~~~DGI~~~~s~nv~I~n~~i~~g-------dD~i~i~s~~~ni~i~n-~~~~-~~~gi~igs~g~~~~~~~v~ni~i~n 297 (362)
..|.+.+.+ ..++|.+.-.++. +|=|.=..+...+.|.| ..+. ...|=-+-|=|.=.....-++|+|+|
T Consensus 193 -cEDA~T~kg-~~~~I~GGgA~~a~~g~~g~~DKV~Q~Ng~gtv~I~~~~F~~~~~~GKl~RSCGnC~~~~~~R~v~i~n 270 (344)
T 3b4n_A 193 -CEDAATNNG-KTMTIVGGIAHNAKDGYGGKPDKVLQHNSKNSTTVVKGNFTLTGEHGKLWRSCGDCSNNGGPRFLTVTS 270 (344)
T ss_dssp -SSCSEEECS-SEEEEESCEEEECTTCTTSSCCEEEEECCSSEEEEEETTEEEEEEEEEEEEECSSCTTCCCCEEEEESS
T ss_pred -ccccceecC-ceEEEECchhccccccccCCCCcEEEeCCCccEEEecCceEEEccCCeEeEccCCcccCCcceEEEEec
Confidence 567788874 4778888777766 55554444455666765 2221 22332222222211222469999999
Q ss_pred EEEeCCce-eEEEEeeCCCCceEEeEEEEeEEEec
Q 017991 298 ALISNTQN-GVRIKTWQGGSGSATNIQFLDVLMKN 331 (362)
Q Consensus 298 ~~i~~~~~-gi~i~~~~g~~g~i~ni~~~ni~~~~ 331 (362)
+++.+... -+.|....|....+ +|+++.+
T Consensus 271 v~~~g~~~~lvGiN~NyGDtati-----~n~~i~~ 300 (344)
T 3b4n_A 271 ATVNGTIDSIAGVNRNYGDVATI-----SGLKIKN 300 (344)
T ss_dssp EEEEEEEEEEEEEEGGGTCEEEE-----CSEEETT
T ss_pred eEEeCCceEEEEEeCCCCCEEEE-----EEEEEec
Confidence 99855432 24455555654444 5555554
No 78
>3t9g_A Pectate lyase; PL3, parallel beta-helix; HET: GOL; 1.50A {Caldicellulosiruptor bescii}
Probab=95.41 E-value=0.64 Score=38.87 Aligned_cols=107 Identities=18% Similarity=0.223 Sum_probs=69.9
Q ss_pred eeEEEEeEEEECCCCCCCCCeeeecCccCEEEEeeEEec-CCccEEEcCCceeEEEEeeEEcCCce--eEEeecCCCCCc
Q 017991 211 LRVVISNLEVIAPAESPNTDGIHISASRGVEVKNSIVGT-GDDCISIVGNSSLIRIRNFACGPGHG--ISIGSLGKSNSS 287 (362)
Q Consensus 211 ~nv~i~n~~I~~~~~~~~~DGI~~~~s~nv~I~n~~i~~-gdD~i~i~s~~~ni~i~n~~~~~~~g--i~igs~g~~~~~ 287 (362)
...+++|+.|-. +..||||..+ +.+|+|..... +.|+++++. ...++|.+.-..+... +....
T Consensus 52 ~GaTLkNvIIG~----~~~dGIHC~G--~ctl~NVwwedVcEDA~T~kg-~g~~~I~GGgA~~A~DKV~Q~Ng------- 117 (196)
T 3t9g_A 52 KGANLKNVIIGA----PGCDGIHCYG--DNVVENVVWEDVGEDALTVKS-EGVVEVIGGSAKEAADKVFQLNA------- 117 (196)
T ss_dssp TTCEEEEEEECS----CCTTCEEECS--SEEEEEEEESSCCSCSEEECS-SEEEEEESCEEEEEEEEEEEECS-------
T ss_pred CCCEEEEEEECC----CCcCcEEEcC--CEeEEEEEeeeeeceeeEEcC-CCeEEEECCCccCCCceEEEECC-------
Confidence 356788888865 3789999975 68899998876 799999996 4566666665444332 22211
Q ss_pred ccEEeEEEEcEEEeCCceeEEEEeeCCCCceEEeEEEEeEEEecCCccE
Q 017991 288 VRIHDIMVYGALISNTQNGVRIKTWQGGSGSATNIQFLDVLMKNVSNPI 336 (362)
Q Consensus 288 ~~v~ni~i~n~~i~~~~~gi~i~~~~g~~g~i~ni~~~ni~~~~~~~~i 336 (362)
--.+.|+|-++.+ .|-..++..+- ..=++|.++|+++.+.+..|
T Consensus 118 --~Gtv~I~nF~~~~--~GKl~RSCGnc-~~~r~v~i~~v~~~n~k~~l 161 (196)
T 3t9g_A 118 --PCTFKVKNFTATN--IGKLVRQNGNT-TFKVVIYLEDVTLNNVKSCV 161 (196)
T ss_dssp --SEEEEEEEEEEEE--EEEEEEECTTC-CSCEEEEEEEEEEEEEEEEE
T ss_pred --CceEEEeeEEEcc--CCEEEEcCCCC-CceeEEEEeCeEEeCCEEEE
Confidence 1356677777665 45555554322 34467888888887775443
No 79
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=94.58 E-value=0.37 Score=44.67 Aligned_cols=113 Identities=4% Similarity=-0.029 Sum_probs=76.9
Q ss_pred eceeeEEEEeEEEECCCC----------------CCCCCeeee-cCccCEEEEeeEEecCCccEEEcCCceeEEEEeeEE
Q 017991 208 TNCLRVVISNLEVIAPAE----------------SPNTDGIHI-SASRGVEVKNSIVGTGDDCISIVGNSSLIRIRNFAC 270 (362)
Q Consensus 208 ~~~~nv~i~n~~I~~~~~----------------~~~~DGI~~-~~s~nv~I~n~~i~~gdD~i~i~s~~~ni~i~n~~~ 270 (362)
..+++++++|++|.+... ...+-++.+ ..++++.+.+|.|...-|.+....+ ...++||++
T Consensus 93 v~a~~f~a~nlt~~Nt~~~~~~~~~~~~~~~~~~~~QAvAl~v~v~~d~~~f~~c~f~G~QDTLy~~~g--r~~~~~c~I 170 (342)
T 2nsp_A 93 ISAKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVTKSGDRAYFKDVSLVGYQATLYVSGG--RSFFSDCRI 170 (342)
T ss_dssp ECSBSCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCBSEEEEEEEEECSTTCEEECSS--EEEEESCEE
T ss_pred EECCCEEEEeeEEEccccccccccccccCCccccCCceEEEEEeeccCcEEEEeeEEecccceEEECCC--CEEEEcCEE
Confidence 357899999999998641 112335521 2468999999999998888887763 689999999
Q ss_pred cCCceeEEeecCCCCCcccEEeEEEEcEEEeCCce---e-----EEEEeeCCCCceEEeEEEEeEEEecC
Q 017991 271 GPGHGISIGSLGKSNSSVRIHDIMVYGALISNTQN---G-----VRIKTWQGGSGSATNIQFLDVLMKNV 332 (362)
Q Consensus 271 ~~~~gi~igs~g~~~~~~~v~ni~i~n~~i~~~~~---g-----i~i~~~~g~~g~i~ni~~~ni~~~~~ 332 (362)
++.-.+-+|. -...|+||++.-... + -.|.........-.++.|.|+++...
T Consensus 171 ~G~vDFIFG~----------a~a~f~~c~i~~~~~~~~~~~~~~g~ItA~~~~~~~~~G~vf~~c~i~~~ 230 (342)
T 2nsp_A 171 SGTVDFIFGD----------GTALFNNCDLVSRYRADVKSGNVSGYLTAPSTNINQKYGLVITNSRVIRE 230 (342)
T ss_dssp EESEEEEEES----------SEEEEESCEEEECCCTTSCTTSCCEEEEEECCBTTCSCCEEEESCEEEES
T ss_pred EeceEEEeCC----------ceEEEecCEEEEecCcccccccCceEEEccCCCCCCCCEEEEEcCEEecC
Confidence 9877777776 247899998864211 1 23332211122344689999999875
No 80
>1ee6_A Pectate lyase; parallel beta-helix, high-alkaline, low-molecular-weight; 2.30A {Bacillus SP} SCOP: b.80.1.1
Probab=93.93 E-value=1 Score=37.77 Aligned_cols=115 Identities=17% Similarity=0.217 Sum_probs=72.7
Q ss_pred eeEEEEeEEEECCCCCCCCCeeeecCccCEEEEeeEEec-CCccEEEcCCceeEEEEeeEEcCCce--eEEeecCCCCCc
Q 017991 211 LRVVISNLEVIAPAESPNTDGIHISASRGVEVKNSIVGT-GDDCISIVGNSSLIRIRNFACGPGHG--ISIGSLGKSNSS 287 (362)
Q Consensus 211 ~nv~i~n~~I~~~~~~~~~DGI~~~~s~nv~I~n~~i~~-gdD~i~i~s~~~ni~i~n~~~~~~~g--i~igs~g~~~~~ 287 (362)
+..+++|+.|-. +..||||..+ +.+|+|..... +.|++.+++ ...++|.+.-..+... +....
T Consensus 48 ~GaTLkNvIIG~----~~~dGIHC~G--~CtleNVwwedVcEDA~T~k~-~g~~~I~GGgA~~A~DKV~Q~Ng------- 113 (197)
T 1ee6_A 48 AGASLKNVVIGA----PAADGVHCYG--DCTITNVIWEDVGEDALTLKS-SGTVNISGGAAYKAYDKVFQINA------- 113 (197)
T ss_dssp TTEEEEEEEECS----SCTTCEEEES--CEEEEEEEESSCCSCSEEEEE-SEEEEEESCEEEEEEEEEEEECS-------
T ss_pred CCCEEEEEEEcC----CCcccEEEcC--ceeEEEEEeeeccccccEEcC-CCeEEEECCCccCCCccEEEecC-------
Confidence 456788888866 4789999976 58999999886 799999996 4556666554433322 22211
Q ss_pred ccEEeEEEEcEEEeCCceeEEEEeeCCCCceEEeEEEEeEEEecCCccEEEEeeeCC
Q 017991 288 VRIHDIMVYGALISNTQNGVRIKTWQGGSGSATNIQFLDVLMKNVSNPIIIDQYYCD 344 (362)
Q Consensus 288 ~~v~ni~i~n~~i~~~~~gi~i~~~~g~~g~i~ni~~~ni~~~~~~~~i~i~~~y~~ 344 (362)
--.+.|+|-+..+ .|=..++..+- ..-++|.++|+++.+.+..|.....|++
T Consensus 114 --~Gtv~I~nF~~~~--~GKl~RScGnc-~~~r~v~i~~v~~~~~k~~i~~~ds~gd 165 (197)
T 1ee6_A 114 --AGTINIRNFRADD--IGKLVRQNGGT-TYKVVMNVENCNISRVKDAILRTDSSTS 165 (197)
T ss_dssp --SEEEEEESCEEEE--EEEEEEECTTC-CSCEEEEEESCEEEEEEEEEEECCCTTC
T ss_pred --CceEEEeeEEEcc--CCEEEEcCCCC-ccceEEEEeceEEECceEEEEEecCCCC
Confidence 1346777766543 35444453222 2337888888888887655544434443
No 81
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=93.58 E-value=0.7 Score=43.17 Aligned_cols=114 Identities=11% Similarity=0.021 Sum_probs=79.1
Q ss_pred eceeeEEEEeEEEECCCC----------------CCCCCeeeec-CccCEEEEeeEEecCCccEEEcCCceeEEEEeeEE
Q 017991 208 TNCLRVVISNLEVIAPAE----------------SPNTDGIHIS-ASRGVEVKNSIVGTGDDCISIVGNSSLIRIRNFAC 270 (362)
Q Consensus 208 ~~~~nv~i~n~~I~~~~~----------------~~~~DGI~~~-~s~nv~I~n~~i~~gdD~i~i~s~~~ni~i~n~~~ 270 (362)
..+++++++|++|.+... ...+-++.+. .+.+..+.+|.|...-|.+.... .....+++|++
T Consensus 119 V~a~~f~a~nitf~Nt~~~~~~~~~~~~~p~~~~~~QAvAl~v~~~~D~~~f~~C~f~G~QDTLy~~~-~gr~yf~~c~I 197 (364)
T 3uw0_A 119 VNAPNFTAENLTIRNDFDFPANKKKADTDPTKLKDTQAVALLLAENSDKARFKAVKLEGYQDTLYSKT-GSRSYFSDCEI 197 (364)
T ss_dssp ECSTTCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCEEEEEEEEEEECSBSCEEECT-TCEEEEESCEE
T ss_pred EECCCEEEEeeeeEcCCcccccccccccccccccCCccEEEEEecCCCeEEEEeeEEEecccceEeCC-CCCEEEEcCEE
Confidence 457889999999988642 1123356664 47899999999999888888773 34779999999
Q ss_pred cCCceeEEeecCCCCCcccEEeEEEEcEEEeCCc------eeEEEEeeCCCCceEEeEEEEeEEEecC
Q 017991 271 GPGHGISIGSLGKSNSSVRIHDIMVYGALISNTQ------NGVRIKTWQGGSGSATNIQFLDVLMKNV 332 (362)
Q Consensus 271 ~~~~gi~igs~g~~~~~~~v~ni~i~n~~i~~~~------~gi~i~~~~g~~g~i~ni~~~ni~~~~~ 332 (362)
++.-.+-+|. -...|+||++.-.. .+-.|.........-.++.|.|+++...
T Consensus 198 ~GtvDFIFG~----------a~a~f~~c~i~~~~~~~~~~~~g~ITA~~~~~~~~~G~vf~~c~i~~~ 255 (364)
T 3uw0_A 198 SGHVDFIFGS----------GITVFDNCNIVARDRSDIEPPYGYITAPSTLTTSPYGLIFINSRLTKE 255 (364)
T ss_dssp EESEEEEEES----------SEEEEESCEEEECCCSSCSSCCEEEEEECCCTTCSCCEEEESCEEEEC
T ss_pred EcCCCEECCc----------ceEEEEeeEEEEeccCcccCCccEEEeCCcCCCCCcEEEEEeeEEecC
Confidence 9887888876 25688999886321 1223333221122335689999999864
No 82
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=89.18 E-value=0.13 Score=48.38 Aligned_cols=38 Identities=32% Similarity=0.433 Sum_probs=27.6
Q ss_pred ccccCCCCcchHHHHHHHHHHHcCCCCCcEEEEcCCcEEEee
Q 017991 60 FGAKGDGFNDDTEAFANAWKKACSFPARTKIVFSAGYTFLIH 101 (362)
Q Consensus 60 ~Ga~~dg~~ddt~aiq~Ai~~a~~~~gg~~v~~P~G~~Y~i~ 101 (362)
=||+|||++|||+|+.+|+.. .. ++.++=-.|.||.+.
T Consensus 4 ~~a~gdgvtddt~a~~~~l~~-~~---~~~~IDG~G~T~kVs 41 (670)
T 3ju4_A 4 GSAKGDGVTDDTAALTSALND-TP---VGQKINGNGKTYKVT 41 (670)
T ss_dssp CCCCCEEEEECHHHHHHHHHH-SC---TTSCEECTTCEEECS
T ss_pred CcccCCCccCcHHHHHHHhcc-CC---CCeEEeCCCceEEee
Confidence 489999999999999999984 22 344444555566554
No 83
>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12}
Probab=87.69 E-value=19 Score=34.03 Aligned_cols=140 Identities=6% Similarity=-0.034 Sum_probs=88.5
Q ss_pred EeceeeEEEEeEEEECCCCC------CCCCeeeecCccCEEEEeeEEecCCccEEEcC----------CceeEEEEeeEE
Q 017991 207 FTNCLRVVISNLEVIAPAES------PNTDGIHISASRGVEVKNSIVGTGDDCISIVG----------NSSLIRIRNFAC 270 (362)
Q Consensus 207 ~~~~~nv~i~n~~I~~~~~~------~~~DGI~~~~s~nv~I~n~~i~~gdD~i~i~s----------~~~ni~i~n~~~ 270 (362)
....+++.++|++|.+.... ..+-.+.+. +.+..+.+|.|...-|.+.... ....-.+++|.+
T Consensus 197 ~V~g~~F~a~niTf~Ntag~~~~~~~~QAVAL~v~-gDr~~fy~C~f~G~QDTLy~~~~~~~~~~~~d~~gRqyy~~CyI 275 (422)
T 3grh_A 197 WSQNNGLQLQNLTIENTLGDSVDAGNHPAVALRTD-GDQVQINNVNILGRQNTFFVTNSGVQNRLETNRQPRTLVTNSYI 275 (422)
T ss_dssp EECCTTCEEEEEEEEETTGGGSCSSCCCCCSEEEC-CSSEEEEEEEEECSTTCEEECCCCTTCSCCSSCCCEEEEESCEE
T ss_pred EEECCCEEEEeeEEEeCCCCCCCCCCCceEEEEec-CCcEEEEeeEEEeecceeeeccccccccccccccccEEEEecEE
Confidence 34467788999999875421 122334443 5799999999998888888743 245679999999
Q ss_pred cCCceeEEeecCCCCCcccEEeEEEEcEEEeCCc----eeEEEEeeCCCCceEEeEEEEeEEEecCC-ccEEEEeeeCCC
Q 017991 271 GPGHGISIGSLGKSNSSVRIHDIMVYGALISNTQ----NGVRIKTWQGGSGSATNIQFLDVLMKNVS-NPIIIDQYYCDS 345 (362)
Q Consensus 271 ~~~~gi~igs~g~~~~~~~v~ni~i~n~~i~~~~----~gi~i~~~~g~~g~i~ni~~~ni~~~~~~-~~i~i~~~y~~~ 345 (362)
++.-.+-+|. -...|++|+|.-.. .+-.|.........-.++.|.|+++.... ....+..-|...
T Consensus 276 eGtVDFIFG~----------a~AvFe~C~I~s~~~~~~~~g~ITA~~t~~~~~~Gfvf~nC~ita~~~~~~yLGRPW~~y 345 (422)
T 3grh_A 276 EGDVDIVSGR----------GAVVFDNTEFRVVNSRTQQEAYVFAPATLSNIYYGFLAVNSRFNAFGDGVAQLGRSLDVD 345 (422)
T ss_dssp EESEEEEEES----------SEEEEESCEEEECCSSCSSCCEEEEECCBTTCCCCEEEESCEEEECSSSCBEEEEEECCS
T ss_pred eccccEEccC----------ceEEEEeeEEEEecCCCCCceEEEecCCCCCCCCEEEEECCEEEeCCCCCEEcCCCCCCc
Confidence 9887788876 25688888886321 12233322222234567899999998542 245555555433
Q ss_pred CCCCCCCCCceeeee
Q 017991 346 PVPCANQVCNPYATC 360 (362)
Q Consensus 346 ~~~c~~~~~~~~~~~ 360 (362)
. +....-||++|
T Consensus 346 s---rt~~qVVf~~s 357 (422)
T 3grh_A 346 A---NTNGQVVIRDS 357 (422)
T ss_dssp T---TBCCEEEEESC
T ss_pred C---CcCccEEEEeC
Confidence 2 22233577776
No 84
>3b4n_A Endo-pectate lyase; pectin, galacturonic acid, right-handed parallel beta helix fold; 1.45A {Erwinia chrysanthemi} PDB: 3b8y_A* 3b90_A
Probab=83.29 E-value=12 Score=34.12 Aligned_cols=118 Identities=14% Similarity=0.136 Sum_probs=67.2
Q ss_pred eeEEEEeEEEECCCCCCCCCeeeecCccCEEEEeeEEec-CCccEEEcCCceeEEEEeeEEcCC-------ce--eEEee
Q 017991 211 LRVVISNLEVIAPAESPNTDGIHISASRGVEVKNSIVGT-GDDCISIVGNSSLIRIRNFACGPG-------HG--ISIGS 280 (362)
Q Consensus 211 ~nv~i~n~~I~~~~~~~~~DGI~~~~s~nv~I~n~~i~~-gdD~i~i~s~~~ni~i~n~~~~~~-------~g--i~igs 280 (362)
...+++|+.|-. ...||||.... +.+|+|..... +.|++.++.+ .++|.+.-..+. .. +....
T Consensus 158 ~GatlkNvIiG~----~~~dGIHC~~G-~CtleNVwwedVcEDA~T~kg~--~~~I~GGgA~~a~~g~~g~~DKV~Q~Ng 230 (344)
T 3b4n_A 158 NATVKNLRISAS----GGADGIHCDSG-NCTIENVIWEDICEDAATNNGK--TMTIVGGIAHNAKDGYGGKPDKVLQHNS 230 (344)
T ss_dssp SCEEEEEEECTT----CCTTCEEEEES-EEEEEEEEESSCSSCSEEECSS--EEEEESCEEEECTTCTTSSCCEEEEECC
T ss_pred cCcEEEEEEecC----CCccceEEccC-CeeEEEEeehhcccccceecCc--eEEEECchhccccccccCCCCcEEEeCC
Confidence 356788888754 47899999832 58999998886 7999999953 455555433221 11 11111
Q ss_pred cCCCCCcccEEeEEEEc-EEEeCCceeEEEEeeCC--CCceEEeEEEEeEEEecCC-ccEEEEeeeCC
Q 017991 281 LGKSNSSVRIHDIMVYG-ALISNTQNGVRIKTWQG--GSGSATNIQFLDVLMKNVS-NPIIIDQYYCD 344 (362)
Q Consensus 281 ~g~~~~~~~v~ni~i~n-~~i~~~~~gi~i~~~~g--~~g~i~ni~~~ni~~~~~~-~~i~i~~~y~~ 344 (362)
--.+.|.| ..+.....|=..++..+ ..+.=++|+++|+.+.+.. .-+.|...|+|
T Consensus 231 ---------~gtv~I~~~~F~~~~~~GKl~RSCGnC~~~~~~R~v~i~nv~~~g~~~~lvGiN~NyGD 289 (344)
T 3b4n_A 231 ---------KNSTTVVKGNFTLTGEHGKLWRSCGDCSNNGGPRFLTVTSATVNGTIDSIAGVNRNYGD 289 (344)
T ss_dssp ---------SSEEEEEETTEEEEEEEEEEEEECSSCTTCCCCEEEEESSEEEEEEEEEEEEEEGGGTC
T ss_pred ---------CccEEEecCceEEEccCCeEeEccCCcccCCcceEEEEeceEEeCCceEEEEEeCCCCC
Confidence 11344443 21111123434444321 1234678888888875553 23457776665
No 85
>2vfm_A Bifunctional tail protein; P22 tailspike protein, salmonella bacteriophage P22, protein folding, protein stability; 1.50A {Enterobacteria phage P22} PDB: 2vfp_A 2vfo_A 2vfq_A 2vfn_A 1tsp_A 1qrb_A 1qq1_A 1qrc_A 1tyu_A* 1tyv_A 1tyw_A* 1tyx_A* 1qa2_A 1clw_A 1qa3_A 1qa1_A
Probab=58.78 E-value=57 Score=29.90 Aligned_cols=81 Identities=15% Similarity=0.206 Sum_probs=48.5
Q ss_pred ccCEEEEeeEEec-CCccEEEcCC-----------------------ceeEEEEeeEEcCCceeEEeecCCCCCcccEEe
Q 017991 237 SRGVEVKNSIVGT-GDDCISIVGN-----------------------SSLIRIRNFACGPGHGISIGSLGKSNSSVRIHD 292 (362)
Q Consensus 237 s~nv~I~n~~i~~-gdD~i~i~s~-----------------------~~ni~i~n~~~~~~~gi~igs~g~~~~~~~v~n 292 (362)
+-|+..+++.... -.|++-+++. ..|-.|.|..+.++-|+.+|--| +.
T Consensus 269 nYNLQFRdS~~l~pVWDGFDLGaD~~m~pE~dRPGD~P~sqYP~HqLP~NHliDnllv~gsLGVG~GMDG--------~G 340 (559)
T 2vfm_A 269 NYNLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRGALGVGFGMDG--------KG 340 (559)
T ss_dssp CBSCEEEEEEEESCSSCSEEECCSCSSSCCSCCTTSCCTTTSCTTCCCCCCEEEEEEEECCSSEEEEEEE--------ES
T ss_pred ccceEeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecccceeeeecC--------CC
Confidence 3466777776544 3666666652 35778888888877777776632 23
Q ss_pred EEEEcEEEeCCc-eeEEEEeeCCCCceEEeEEEEeEEEecCC
Q 017991 293 IMVYGALISNTQ-NGVRIKTWQGGSGSATNIQFLDVLMKNVS 333 (362)
Q Consensus 293 i~i~n~~i~~~~-~gi~i~~~~g~~g~i~ni~~~ni~~~~~~ 333 (362)
.+++|+++.+|. .|..+-+ .+-+|.||++.++.
T Consensus 341 ~YVSNitv~DCAGsG~~~~t--------~~~~FtNi~vID~N 374 (559)
T 2vfm_A 341 MYVSNITVEDCAGSGAYLLT--------HESVFTNIAIIDTN 374 (559)
T ss_dssp CEEEEEEEESCSSEEEEEEE--------ESCEEEEEEEESCC
T ss_pred ceEeeeEehhccCcceEEee--------ccceeeeeEEEecc
Confidence 344555555553 3544433 34577888877664
No 86
>2v5i_A Salmonella typhimurium DB7155 bacteriophage DET7 tailspike; O-antigen binding and hydrolysis, beta-helix, viral protein; 1.60A {Bacteriophage}
Probab=56.72 E-value=57 Score=29.91 Aligned_cols=81 Identities=14% Similarity=0.173 Sum_probs=49.0
Q ss_pred ccCEEEEeeEEec-CCccEEEcCC-----------------------ceeEEEEeeEEcCCceeEEeecCCCCCcccEEe
Q 017991 237 SRGVEVKNSIVGT-GDDCISIVGN-----------------------SSLIRIRNFACGPGHGISIGSLGKSNSSVRIHD 292 (362)
Q Consensus 237 s~nv~I~n~~i~~-gdD~i~i~s~-----------------------~~ni~i~n~~~~~~~gi~igs~g~~~~~~~v~n 292 (362)
+-|+..+++.... -.|++-+++. ..|-.|.|..+.++-|+.+|--| +.
T Consensus 272 nYNLQFRdS~~l~pVWDGFDLGaD~~m~pE~dRPGD~P~sqYP~HqLP~NHliDnllv~gsLGVG~GMDG--------~G 343 (559)
T 2v5i_A 272 NYNLQFRDSVALSPVWDGFDLGSDPGMAPEPDRPGDLPVSEYPFHQLPNNHLVDNILVMNSLGVGLGMDG--------SG 343 (559)
T ss_dssp CBSCEEEEEEEESCSSCSEECCSSCTTCCSSSCTTSCCTTTSCTTCCCCCCEEEEEEEESCSSEEEEEEE--------ES
T ss_pred ccceEeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecccceeeeecC--------CC
Confidence 3467777776554 3566666552 35778888888887777776632 23
Q ss_pred EEEEcEEEeCCc-eeEEEEeeCCCCceEEeEEEEeEEEecCC
Q 017991 293 IMVYGALISNTQ-NGVRIKTWQGGSGSATNIQFLDVLMKNVS 333 (362)
Q Consensus 293 i~i~n~~i~~~~-~gi~i~~~~g~~g~i~ni~~~ni~~~~~~ 333 (362)
.+++|+++.+|. .|..+-+ .+-+|.||++.++.
T Consensus 344 ~YVSNitv~DCAGsG~~~~t--------~~~~FtNi~vID~N 377 (559)
T 2v5i_A 344 GYVSNVTVQDCAGAGMLAHT--------YNRVFSNITVIDCN 377 (559)
T ss_dssp CEEEEEEEESCSSEEEEEEE--------ESCEEEEEEEESCC
T ss_pred ceEeeeEehhccCcceEEee--------ccceeeeeEEEecc
Confidence 345555555553 3544433 34578888887764
No 87
>3riq_A Tailspike protein; right handed beta-helix, endorhamnosidase, lipopolysaccharide, viral protein; 1.50A {Siphovirus 9na}
Probab=51.29 E-value=1e+02 Score=28.93 Aligned_cols=28 Identities=11% Similarity=0.153 Sum_probs=17.8
Q ss_pred eeEEEEeeCCCC--ceEEeEEEEeEEEecC
Q 017991 305 NGVRIKTWQGGS--GSATNIQFLDVLMKNV 332 (362)
Q Consensus 305 ~gi~i~~~~g~~--g~i~ni~~~ni~~~~~ 332 (362)
+||+|+..++.+ =..-|=+++|++...+
T Consensus 383 nGi~I~~~~~~G~~I~APnStvS~i~g~v~ 412 (543)
T 3riq_A 383 RGIMVHAYTTQGYAVYAPSSEVSNVSCAGS 412 (543)
T ss_dssp EEEEEECSSCSSCSEEEEEEEEEEEEECTT
T ss_pred cceEeeccCCCceEEECCCccccccccCCC
Confidence 488888765432 1455777777776653
No 88
>3riq_A Tailspike protein; right handed beta-helix, endorhamnosidase, lipopolysaccharide, viral protein; 1.50A {Siphovirus 9na}
Probab=50.73 E-value=26 Score=32.79 Aligned_cols=70 Identities=19% Similarity=0.214 Sum_probs=37.7
Q ss_pred eeEEEEeeEEcCCceeEEeecCCCCCcccEEeEEEEcEEEeCCceeEEEEeeCCCCceEEeEEEEeEEEecCCc-cEEEE
Q 017991 261 SLIRIRNFACGPGHGISIGSLGKSNSSVRIHDIMVYGALISNTQNGVRIKTWQGGSGSATNIQFLDVLMKNVSN-PIIID 339 (362)
Q Consensus 261 ~ni~i~n~~~~~~~gi~igs~g~~~~~~~v~ni~i~n~~i~~~~~gi~i~~~~g~~g~i~ni~~~ni~~~~~~~-~i~i~ 339 (362)
.|-.|+|....+++|+.+|--| ....++||++++|. ..|+.+++. +=+|.||++.++.. -...+
T Consensus 308 ~nHii~Ni~~~~~lGVG~~~DG---~~~~v~ni~~~dca----g~G~~~~~~--------~~~ftNitvI~~N~~~~~~n 372 (543)
T 3riq_A 308 TQHIIRNIITRDCMGIGAWWDG---QKNIIDNVVTYEAH----KEGMFDRGT--------NNDITNITVVCANKDLTNLN 372 (543)
T ss_dssp CCCEEEEEEEESCSSCSSEECS---SSCEEEEEEEESCS----SCSEEECSS--------SCEEEEEEEESCSTTCSSCC
T ss_pred hhhhhhhhheeccceeeeeecC---CCCeEeeEEeeccc----cCcceeecc--------CcceeeEEEEeccccCCCcc
Confidence 5667788877777777766533 34455555544432 235555532 23466666665532 12244
Q ss_pred eeeCCC
Q 017991 340 QYYCDS 345 (362)
Q Consensus 340 ~~y~~~ 345 (362)
|-|+..
T Consensus 373 QI~i~G 378 (543)
T 3riq_A 373 QIVCEG 378 (543)
T ss_dssp SEEECS
T ss_pred eEEEec
Confidence 444444
No 89
>2xc1_A Bifunctional tail protein; hydrolase, endoglycosidase, salmonella phage P22; HET: PE4; 1.65A {Enterobacteria phage P22} PDB: 1lkt_A
Probab=48.75 E-value=93 Score=29.77 Aligned_cols=81 Identities=15% Similarity=0.206 Sum_probs=49.9
Q ss_pred ccCEEEEeeEEec-CCccEEEcCC-----------------------ceeEEEEeeEEcCCceeEEeecCCCCCcccEEe
Q 017991 237 SRGVEVKNSIVGT-GDDCISIVGN-----------------------SSLIRIRNFACGPGHGISIGSLGKSNSSVRIHD 292 (362)
Q Consensus 237 s~nv~I~n~~i~~-gdD~i~i~s~-----------------------~~ni~i~n~~~~~~~gi~igs~g~~~~~~~v~n 292 (362)
+-|+..+++.... -.|++-+++. ..|-.|.|..+.++-|+.+|--| +.
T Consensus 376 nynlqfrds~~~~pvwdgfdlg~d~~m~pe~drpgd~p~~~yp~h~lp~nhlidn~~v~~slgvg~gmdg--------~g 447 (666)
T 2xc1_A 376 NYNLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRGALGVGFGMDG--------KG 447 (666)
T ss_dssp CBSCEEEEEEEECCSSCSEEECCSCSSCTTCCCTTSCCTTTSCTTCCCCCCEEEEEEEESCSSEEEEEEE--------ES
T ss_pred ccceeeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecccceeeeecC--------CC
Confidence 4467777776654 3677777652 35778888888887777776632 23
Q ss_pred EEEEcEEEeCCc-eeEEEEeeCCCCceEEeEEEEeEEEecCC
Q 017991 293 IMVYGALISNTQ-NGVRIKTWQGGSGSATNIQFLDVLMKNVS 333 (362)
Q Consensus 293 i~i~n~~i~~~~-~gi~i~~~~g~~g~i~ni~~~ni~~~~~~ 333 (362)
.+++|+++.+|. .|..+-+ .+-+|.||++.++.
T Consensus 448 ~yvsnitv~dcag~g~~~~~--------~~~~ftni~vid~n 481 (666)
T 2xc1_A 448 MYVSNITVEDCAGSGAYLLT--------HESVFTNIAIIDTN 481 (666)
T ss_dssp CEEEEEEEESCSSEEEEEEE--------ESCEEEEEEEESCC
T ss_pred ceEeeeEehhccCcceEEee--------ccceeeeeEEEecc
Confidence 345555555553 3544433 34578888887764
No 90
>2vfm_A Bifunctional tail protein; P22 tailspike protein, salmonella bacteriophage P22, protein folding, protein stability; 1.50A {Enterobacteria phage P22} PDB: 2vfp_A 2vfo_A 2vfq_A 2vfn_A 1tsp_A 1qrb_A 1qq1_A 1qrc_A 1tyu_A* 1tyv_A 1tyw_A* 1tyx_A* 1qa2_A 1clw_A 1qa3_A 1qa1_A
Probab=31.05 E-value=3.1e+02 Score=25.11 Aligned_cols=68 Identities=16% Similarity=0.177 Sum_probs=34.3
Q ss_pred eceeeEEEEeEEEECCCCCCCCCeeeecC------------------------ccCEEEEeeEEecCCccEEEcCCceeE
Q 017991 208 TNCLRVVISNLEVIAPAESPNTDGIHISA------------------------SRGVEVKNSIVGTGDDCISIVGNSSLI 263 (362)
Q Consensus 208 ~~~~nv~i~n~~I~~~~~~~~~DGI~~~~------------------------s~nv~I~n~~i~~gdD~i~i~s~~~ni 263 (362)
.+|-|+.+++.....| --||+++.+ -.|-+|+|..+++ .=++-++-..+..
T Consensus 267 sRnYNLQFRdS~~l~p----VWDGFDLGaD~~m~pE~dRPGD~P~sqYP~HqLP~NHliDnllv~g-sLGVG~GMDG~G~ 341 (559)
T 2vfm_A 267 SRNYNLQFRDSVVIYP----VWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRG-ALGVGFGMDGKGM 341 (559)
T ss_dssp CCCBSCEEEEEEEESC----SSCSEEECCSCSSSCCSCCTTSCCTTTSCTTCCCCCCEEEEEEEEC-CSSEEEEEEEESC
T ss_pred ccccceEeecceEEee----ccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeec-ccceeeeecCCCc
Confidence 3456777777766653 234444432 2366788877774 2333333222333
Q ss_pred EEEeeEEcC--CceeEEee
Q 017991 264 RIRNFACGP--GHGISIGS 280 (362)
Q Consensus 264 ~i~n~~~~~--~~gi~igs 280 (362)
.|+|.+++. +.|.-+..
T Consensus 342 YVSNitv~DCAGsG~~~~t 360 (559)
T 2vfm_A 342 YVSNITVEDCAGSGAYLLT 360 (559)
T ss_dssp EEEEEEEESCSSEEEEEEE
T ss_pred eEeeeEehhccCcceEEee
Confidence 444444443 34444444
No 91
>3bh7_B Protein XRP2; protein-protein complex, GTPase activating protein and GTPase, retinitis pigmentosa, GTP-binding, lipoprotein, myristate; HET: GDP; 1.90A {Homo sapiens} PDB: 3bh6_B* 2bx6_A
Probab=30.96 E-value=3.1e+02 Score=25.02 Aligned_cols=11 Identities=18% Similarity=0.646 Sum_probs=5.2
Q ss_pred EEEEeecceEE
Q 017991 182 ITFHKCKNLKV 192 (362)
Q Consensus 182 i~~~~~~nv~I 192 (362)
+.+.+|+|.+|
T Consensus 64 v~I~nc~~c~I 74 (352)
T 3bh7_B 64 FLIQDCENCNI 74 (352)
T ss_dssp EEEESCBSCEE
T ss_pred EEEecCcCCEE
Confidence 44444544444
No 92
>2v5i_A Salmonella typhimurium DB7155 bacteriophage DET7 tailspike; O-antigen binding and hydrolysis, beta-helix, viral protein; 1.60A {Bacteriophage}
Probab=30.92 E-value=3.1e+02 Score=25.15 Aligned_cols=68 Identities=15% Similarity=0.163 Sum_probs=34.6
Q ss_pred eceeeEEEEeEEEECCCCCCCCCeeeecC------------------------ccCEEEEeeEEecCCccEEEcCCceeE
Q 017991 208 TNCLRVVISNLEVIAPAESPNTDGIHISA------------------------SRGVEVKNSIVGTGDDCISIVGNSSLI 263 (362)
Q Consensus 208 ~~~~nv~i~n~~I~~~~~~~~~DGI~~~~------------------------s~nv~I~n~~i~~gdD~i~i~s~~~ni 263 (362)
.+|-|+.+++.....| --||+++.+ -.|-+|+|..+++ .=++-++-..+..
T Consensus 270 sRnYNLQFRdS~~l~p----VWDGFDLGaD~~m~pE~dRPGD~P~sqYP~HqLP~NHliDnllv~g-sLGVG~GMDG~G~ 344 (559)
T 2v5i_A 270 ARNYNLQFRDSVALSP----VWDGFDLGSDPGMAPEPDRPGDLPVSEYPFHQLPNNHLVDNILVMN-SLGVGLGMDGSGG 344 (559)
T ss_dssp CCCBSCEEEEEEEESC----SSCSEECCSSCTTCCSSSCTTSCCTTTSCTTCCCCCCEEEEEEEES-CSSEEEEEEEESC
T ss_pred ccccceEeecceEEee----ccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeec-ccceeeeecCCCc
Confidence 3566777887766664 234444432 2366788887774 2233333222333
Q ss_pred EEEeeEEcC--CceeEEee
Q 017991 264 RIRNFACGP--GHGISIGS 280 (362)
Q Consensus 264 ~i~n~~~~~--~~gi~igs 280 (362)
.|+|.+++. +.|.-+..
T Consensus 345 YVSNitv~DCAGsG~~~~t 363 (559)
T 2v5i_A 345 YVSNVTVQDCAGAGMLAHT 363 (559)
T ss_dssp EEEEEEEESCSSEEEEEEE
T ss_pred eEeeeEehhccCcceEEee
Confidence 444444443 34444444
No 93
>2yuh_A Tubulin-specific chaperone C; microtubule, beta-tubulin folding, beta-roll, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.71 E-value=54 Score=26.93 Aligned_cols=11 Identities=9% Similarity=0.492 Sum_probs=5.4
Q ss_pred EEEEeecceEE
Q 017991 182 ITFHKCKNLKV 192 (362)
Q Consensus 182 i~~~~~~nv~I 192 (362)
+.+.+|++++|
T Consensus 71 v~i~~C~~~~i 81 (179)
T 2yuh_A 71 VFLEDCSDCVL 81 (179)
T ss_dssp EEEESCBSCEE
T ss_pred EEEEeCCceEE
Confidence 44455555444
No 94
>2xc1_A Bifunctional tail protein; hydrolase, endoglycosidase, salmonella phage P22; HET: PE4; 1.65A {Enterobacteria phage P22} PDB: 1lkt_A
Probab=24.57 E-value=4.4e+02 Score=25.24 Aligned_cols=68 Identities=16% Similarity=0.177 Sum_probs=35.3
Q ss_pred eceeeEEEEeEEEECCCCCCCCCeeeecC------------------------ccCEEEEeeEEecCCccEEEcCCceeE
Q 017991 208 TNCLRVVISNLEVIAPAESPNTDGIHISA------------------------SRGVEVKNSIVGTGDDCISIVGNSSLI 263 (362)
Q Consensus 208 ~~~~nv~i~n~~I~~~~~~~~~DGI~~~~------------------------s~nv~I~n~~i~~gdD~i~i~s~~~ni 263 (362)
.+|-|+.+++.....+ --||+++.+ -.|-+|+|..+++ .=++-++-..+..
T Consensus 374 srnynlqfrds~~~~p----vwdgfdlg~d~~m~pe~drpgd~p~~~yp~h~lp~nhlidn~~v~~-slgvg~gmdg~g~ 448 (666)
T 2xc1_A 374 SRNYNLQFRDSVVIYP----VWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRG-ALGVGFGMDGKGM 448 (666)
T ss_dssp CCCBSCEEEEEEEECC----SSCSEEECCSCSSCTTCCCTTSCCTTTSCTTCCCCCCEEEEEEEES-CSSEEEEEEEESC
T ss_pred ccccceeeecceEEee----ccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeec-ccceeeeecCCCc
Confidence 3566788888776664 335555433 2366788887774 2233333222333
Q ss_pred EEEeeEEcC--CceeEEee
Q 017991 264 RIRNFACGP--GHGISIGS 280 (362)
Q Consensus 264 ~i~n~~~~~--~~gi~igs 280 (362)
.|+|.+++. +.|.-+..
T Consensus 449 yvsnitv~dcag~g~~~~~ 467 (666)
T 2xc1_A 449 YVSNITVEDCAGSGAYLLT 467 (666)
T ss_dssp EEEEEEEESCSSEEEEEEE
T ss_pred eEeeeEehhccCcceEEee
Confidence 444444443 34444444
No 95
>3ky7_A TRNA (guanine-N(1)-)-methyltransferase; putative tRNA (guanine-7-)-methyltransferase, structural GEN infectious diseases; 2.35A {Staphylococcus aureus subsp} SCOP: c.116.1.0
Probab=22.79 E-value=58 Score=28.45 Aligned_cols=49 Identities=18% Similarity=0.136 Sum_probs=30.4
Q ss_pred CeeEEeeeccccCCCCcchH------------HHHHHHHHHHcCCCCCcEEE-EcCCcEEEe
Q 017991 52 KRVIFVGDFGAKGDGFNDDT------------EAFANAWKKACSFPARTKIV-FSAGYTFLI 100 (362)
Q Consensus 52 ~~~~~v~~~Ga~~dg~~ddt------------~aiq~Ai~~a~~~~gg~~v~-~P~G~~Y~i 100 (362)
-.++|++||.-.--.+.||+ +-|.+||+++.+....-+|+ -|.|++|..
T Consensus 57 i~~~n~Rdf~~dkH~~VDD~PyGGGaGMVm~~ePl~~Al~~~~~~~~~~vI~lsP~G~~f~Q 118 (269)
T 3ky7_A 57 INTVNFRDYAINKHNQVDDYPYGGGQGMVLKPEPVFNAMEDLDVTEQARVILMCPQGEPFSH 118 (269)
T ss_dssp EEEEEGGGGC-CCSCCSEECCTTCCSSCEECHHHHHHHHHHTTCCTTSEEEEEEEEEEECCH
T ss_pred EEEEcchhhcCCCCcccCCCCCCCCCCcEeeHHHHHHHHHHHHhcCCCcEEEECCCCCccCH
Confidence 34677778876665666775 56899999654432223444 388966644
Done!