RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= 017995
(362 letters)
>d1nb9a_ b.43.5.1 (A:) Riboflavin kinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 147
Score = 142 bits (360), Expect = 2e-42
Identities = 67/141 (47%), Positives = 101/141 (71%)
Query: 215 PWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMS 274
P++ G VV+G GRGSK LGIPTAN + ++ ++ +G+Y+GWA + + V+KMV+S
Sbjct: 4 PYFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADISTGIYYGWASVGSGDVHKMVVS 63
Query: 275 IGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRK 334
IGWNPY+ N +K++E ++H F EDFY E L++ IVGY+RPE NF SLE+LI+ I D +
Sbjct: 64 IGWNPYYKNTKKSMETHIMHTFKEDFYGEILNVAIVGYLRPEKNFDSLESLISAIQGDIE 123
Query: 335 VAERALDLPLYSKYRDDPYLK 355
A++ L+LP Y K ++D + +
Sbjct: 124 EAKKRLELPEYLKIKEDNFFQ 144
>d1n08a_ b.43.5.1 (A:) Riboflavin kinase {Fission yeast
(Schizosaccharomyces pombe) [TaxId: 4896]}
Length = 154
Score = 141 bits (356), Expect = 9e-42
Identities = 70/162 (43%), Positives = 99/162 (61%), Gaps = 8/162 (4%)
Query: 194 RPEKWGLPPFQDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHP 253
RPE G + ++ P G VV G GRGSK LGIPTAN+S + ++L
Sbjct: 1 RPEIVG----PEKVQ---SPYPIRFEGKVVHGFGRGSKELGIPTANISEDAIQELLRYRD 53
Query: 254 SGVYFGWAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYI 313
SGVYFG+ + + V+ MVMS+GWNPY+ N ++ E L+ EDFY+E + ++++GYI
Sbjct: 54 SGVYFGY-AMVQKRVFPMVMSVGWNPYYKNKLRSAEVHLIERQGEDFYEEIMRVIVLGYI 112
Query: 314 RPEANFPSLETLIAKIHEDRKVAERALDLPLYSKYRDDPYLK 355
RPE N+ L+ LI IH D +VA ++D P YS Y+ DP+ K
Sbjct: 113 RPELNYAGLDKLIEDIHTDIRVALNSMDRPSYSSYKKDPFFK 154
>d1mrza1 b.43.5.1 (A:159-288) Riboflavin kinase domain of
bifunctional FAD synthetase {Thermotoga maritima [TaxId:
2336]}
Length = 130
Score = 105 bits (263), Expect = 2e-28
Identities = 41/132 (31%), Positives = 60/132 (45%), Gaps = 3/132 (2%)
Query: 216 WYIGGPVVKGLGRGSKVLGIPTANLSTEGYSDVLSEHPSGVYFGWAGLSTRGVYKMVMSI 275
+ I G V K G K LG PTAN+ V + GVY L VM++
Sbjct: 2 FEIEGIVHKDREFGRK-LGFPTANIDRGNEKLV--DLKRGVYLVRVHLPDGKKKFGVMNV 58
Query: 276 GWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVGYIRPEANFPSLETLIAKIHEDRKV 335
G+ P +A + +F+ D Y + L L ++ ++R E F S+E L A I +D K
Sbjct: 59 GFRPTVGDARNVKYEVYILDFEGDLYGQRLKLEVLKFMRDEKKFDSIEELKAAIDQDVKS 118
Query: 336 AERALDLPLYSK 347
A +D + SK
Sbjct: 119 ARNMIDDIINSK 130
>d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens)
[TaxId: 9606]}
Length = 253
Score = 75.2 bits (183), Expect = 4e-16
Identities = 19/135 (14%), Positives = 41/135 (30%), Gaps = 2/135 (1%)
Query: 61 MFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGS 120
F+ K + ++ G+ + + S+ + + + V
Sbjct: 118 AFTAGRMKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHF 177
Query: 121 DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV--PSLPKQTH 178
D K + + + A + ++ L + D A + A + V V P T
Sbjct: 178 DTKIGHKVESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTD 237
Query: 179 RYTAADEVINSLLDL 193
+I S +L
Sbjct: 238 DEKTYYSLITSFSEL 252
>d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 222
Score = 68.6 bits (166), Expect = 4e-14
Identities = 21/157 (13%), Positives = 52/157 (33%), Gaps = 6/157 (3%)
Query: 19 KEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRL 78
+ G+ E + G ++ +++++S +
Sbjct: 49 QLMKGKITFSQWVPLMDESYRKSSKACGANLPENFSISQIFSQAMAAR---SINRPMLQA 105
Query: 79 IKHLSCHGVPMALASNSHRATIESKISY---QHGWNESFSVIVGSDEVRTGKPSPDIFLE 135
L G + +N+ + + S ++ F ++ S +V KP P I+
Sbjct: 106 AIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHFDFLIESCQVGMIKPEPQIYNF 165
Query: 136 AAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 172
L +P+ + ++D + + GM + V +
Sbjct: 166 LLDTLKAKPNEVVFLDDFGSNLKPARDMGMVTILVHN 202
>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546)
{Staphylococcus aureus [TaxId: 1280]}
Length = 380
Score = 69.4 bits (169), Expect = 1e-13
Identities = 28/205 (13%), Positives = 59/205 (28%), Gaps = 34/205 (16%)
Query: 22 DGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKH 81
+ + + +E + + Y K + + ++ + L+
Sbjct: 168 SLKGALWTLAQEVYQEWYLGSKLYE-DVEKKIARTTFKTGYIYQEIILRPVDEVKVLLND 226
Query: 82 LSCHGVPMALASNSHRATIESKISYQHGWNESF--SVIVGSDEVRTG-----------KP 128
L G + +A+ G F I + +V KP
Sbjct: 227 LKGAGFELGIATGRPYTETV-VPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKP 285
Query: 129 SPDIFLEAAKRLNME--------------PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP 174
+P ++ A N + ++ DS+ +++ + G + +
Sbjct: 286 NPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGL 345
Query: 175 KQTH-----RYTAADEVINSLLDLR 194
K AD VIN L +LR
Sbjct: 346 KGKDAAGELEAHHADYVINHLGELR 370
>d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia
coli [TaxId: 562]}
Length = 197
Score = 66.7 bits (161), Expect = 1e-13
Identities = 24/178 (13%), Positives = 54/178 (30%), Gaps = 8/178 (4%)
Query: 1 MTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLE------EAAIIVEDYGLPCAKHEF 54
+ D F+ VL + +K +G+ + E A
Sbjct: 11 IVDIDFNRVLGAWSDLTRIPLASLKKSFHMGEAFHQHERGEISDEAFAEALCHEMALPLS 70
Query: 55 VNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF 114
+ + ++ P ++ L G + + SN++R ++
Sbjct: 71 YEQFSHGWQAVFVALR--PEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAA 128
Query: 115 SVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 172
I S ++ KP I+ + PS ++ +D+ + G+ + V
Sbjct: 129 DHIYLSQDLGMRKPEARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVKD 186
>d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 225
Score = 64.8 bits (156), Expect = 9e-13
Identities = 25/159 (15%), Positives = 46/159 (28%), Gaps = 6/159 (3%)
Query: 17 YGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGAN 76
+ G E E + K+ + E+ F + K
Sbjct: 49 TTRLMKGEITLSQWIPLMEENCRKCSETAKVCLPKNFSIKEI---FDKAISARKINRPML 105
Query: 77 RLIKHLSCHGVPMALASNSHRATIESKISY---QHGWNESFSVIVGSDEVRTGKPSPDIF 133
+ L G A+ +N+ + F ++ S +V KP P I+
Sbjct: 106 QAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIY 165
Query: 134 LEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 172
L PS + ++D + + GM + V
Sbjct: 166 KFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILVQD 204
>d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId:
562]}
Length = 218
Score = 61.4 bits (147), Expect = 1e-11
Identities = 36/198 (18%), Positives = 82/198 (41%), Gaps = 3/198 (1%)
Query: 2 TDGMFSEVLKTFLVKYGKEWDGRE--KHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVY 59
++ ++ + G + R + + + ++ E V V
Sbjct: 17 SEPLWDRAELDVMASLGVDISRRNELPDTLGLRIDMVVDLWYARQPWNGPSRQEVVERVI 76
Query: 60 SMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVG 119
+ + + + L R L + +++ + K+ +SF +
Sbjct: 77 ARAISLVEETRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALAS 136
Query: 120 SDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTH- 178
++++ KP P ++L+ A +L ++P + + +EDSV G++A KAA M + VP+ Q
Sbjct: 137 AEKLPYSKPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDP 196
Query: 179 RYTAADEVINSLLDLRPE 196
R+ A+ ++SL +L +
Sbjct: 197 RFVLANVKLSSLTELTAK 214
>d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 164
Score = 59.1 bits (142), Expect = 3e-11
Identities = 16/131 (12%), Positives = 37/131 (28%), Gaps = 12/131 (9%)
Query: 70 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPS 129
+ P ++ L GVP+A AS + +++ + F
Sbjct: 46 QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFIQREIYP-----GSK 100
Query: 130 PDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINS 189
F + + S + +D ++ G+ + + + +
Sbjct: 101 VTHFERLHHKTGVPFSQMVFFDDENRNIIDVGRLGVTCIHIR------DGMS-LQTLTQG 153
Query: 190 LLDLRPEKWGL 200
L + GL
Sbjct: 154 LETFAKAQAGL 164
>d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 222
Score = 58.3 bits (139), Expect = 1e-10
Identities = 36/198 (18%), Positives = 66/198 (33%), Gaps = 6/198 (3%)
Query: 2 TDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSM 61
++ + ++V L + G E + + + VE +++ +
Sbjct: 16 SEIIAAQVESRLLTEAGYPISVEEMGERFAGMTWKNILLQVESEASIPLSASLLDKSEKL 75
Query: 62 FSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD 121
L + + + + S+SHR + +
Sbjct: 76 LDMRLERDVKIIDGVKFALSRLTTPRCICSNSSSHRLDMMLTKVGLKPYFAPHIYSAKDL 135
Query: 122 EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS------LPK 175
KP PDIFL A + + P +V+EDSV G+ +AAGM V+
Sbjct: 136 GADRVKPKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHA 195
Query: 176 QTHRYTAADEVINSLLDL 193
A+ VI+ + DL
Sbjct: 196 DRLTDAGAETVISRMQDL 213
>d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis
[TaxId: 1358]}
Length = 221
Score = 56.4 bits (134), Expect = 7e-10
Identities = 43/202 (21%), Positives = 71/202 (35%), Gaps = 14/202 (6%)
Query: 2 TDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFV------ 55
T K + G R+ ++ + E++ + D E
Sbjct: 16 TAEYHFRAWKALAEEIGINGVDRQFNEQLKGVSREDSLQKILDLADKKVSAEEFKELAKR 75
Query: 56 -NEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF 114
N+ Y + PG +L+K L + + +ALAS S + + F
Sbjct: 76 KNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASASKNGPF---LLERMNLTGYF 132
Query: 115 SVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP 174
I EV KP+PDIF+ AA + + PS S+ +EDS G+ A K +G + V
Sbjct: 133 DAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGR-- 190
Query: 175 KQTHRYTAADEVINSLLDLRPE 196
++ E
Sbjct: 191 --PEDLGDDIVIVPDTSHYTLE 210
>d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus
cereus [TaxId: 1396]}
Length = 257
Score = 55.6 bits (132), Expect = 2e-09
Identities = 29/178 (16%), Positives = 56/178 (31%), Gaps = 15/178 (8%)
Query: 8 EVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLC 67
EV K G E K +G ++ + E + + ++ +
Sbjct: 23 EVFMEIFHKRGVAITAEEARKPMGLLKIDHVRALTEMPRIASEWNRVFRQLPTEADIQEM 82
Query: 68 --------------KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNES 113
+ G +I L G+ + + R ++
Sbjct: 83 YEEFEEILFAILPRYASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYK 142
Query: 114 FSVIVGSDEVRTGKPSPDIFLEAAKRLN-MEPSSSLVIEDSVIGVVAGKAAGMEVVAV 170
+V D+V G+P P + + A L + + + D+V + G+ AGM V V
Sbjct: 143 PDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGV 200
>d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 225
Score = 54.0 bits (128), Expect = 4e-09
Identities = 18/199 (9%), Positives = 47/199 (23%), Gaps = 12/199 (6%)
Query: 6 FSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAA-----IIVEDYGLPCAKHEFVNEVYS 60
F+ + + + ++ E+ ++ +D P K
Sbjct: 28 FTNKVPQLVQQDTRDSPVSNILSQFHIDNKEQLQAHILELVAKDVKDPILKQLQGYVWAH 87
Query: 61 MFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIE------SKISYQHGWNESF 114
+ K A IK + + + + + + N
Sbjct: 88 GYESGQIKAPVYADAIDFIKRKKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYI 147
Query: 115 SVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP 174
+ K + + + + S L + D+ + + A G+
Sbjct: 148 DGYFDIN-TSGKKTETQSYANILRDIGAKASEVLFLSDNPLELDAAAGVGIATGLASRPG 206
Query: 175 KQTHRYTAADEVINSLLDL 193
+V + L
Sbjct: 207 NAPVPDGQKYQVYKNFETL 225
>d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas
sp., strain YL [TaxId: 306]}
Length = 220
Score = 52.6 bits (124), Expect = 1e-08
Identities = 23/162 (14%), Positives = 53/162 (32%), Gaps = 2/162 (1%)
Query: 33 TPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALA 92
++A + + S D ++ ++ L G+ +A+
Sbjct: 56 VNFQQATEDALRFTCRHLGLDLDARTRSTLCDAYLRLAPFSEVPDSLRELKRRGLKLAIL 115
Query: 93 SNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIED 152
SN +I+ + G + F ++ D V+ KP ++ A + L ++ S+ L +
Sbjct: 116 SNGSPQSID-AVVSHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAILFVAS 174
Query: 153 SVIGVVAGKAAGMEVVAVPSLPKQTHRY-TAADEVINSLLDL 193
+ + G + D + SL +
Sbjct: 175 NAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTSLRAV 216
>d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805
{Streptococcus pneumoniae [TaxId: 1313]}
Length = 187
Score = 51.6 bits (122), Expect = 1e-08
Identities = 29/171 (16%), Positives = 53/171 (30%), Gaps = 10/171 (5%)
Query: 2 TDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSM 61
+ L YG D ++ + + F+ +
Sbjct: 17 NYETSTAAFVETLALYGITQDHDSVYQALKVSTPFA------IETFAPNLENFLEKYKEN 70
Query: 62 FSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD 121
+ L G + L++ +S G L S+ + +E + V S
Sbjct: 71 EARELEHPILFEGVSDLLEDISNQGGRHFLVSHRNDQVLEILEKTSIAAYFTEVVTSSSG 130
Query: 122 EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 172
R P + L ++ + LVI D I + AG+AAG++ S
Sbjct: 131 FKRKPNP--ESMLYLREKYQISSG--LVIGDRPIDIEAGQAAGLDTHLFTS 177
>d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter
autotrophicus [TaxId: 280]}
Length = 245
Score = 52.5 bits (124), Expect = 2e-08
Identities = 30/160 (18%), Positives = 54/160 (33%), Gaps = 12/160 (7%)
Query: 48 PCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQ 107
F+ ++ ++ A L A+ SN ++ +
Sbjct: 75 LEPDESFLADMAQAYNRLTPYPDAAQCLAELAPL------KRAILSNGAPDMLQ-ALVAN 127
Query: 108 HGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV 167
G +SF ++ D R KP PD + + L + P+ L + + V K G V
Sbjct: 128 AGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSV 187
Query: 168 VAV-----PSLPKQTHRYTAADEVINSLLDLRPEKWGLPP 202
V +L ++ T A + L +R E + P
Sbjct: 188 ARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAP 227
>d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064
{Streptococcus pneumoniae [TaxId: 1313]}
Length = 204
Score = 47.9 bits (112), Expect = 4e-07
Identities = 22/194 (11%), Positives = 63/194 (32%), Gaps = 9/194 (4%)
Query: 2 TDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSM 61
+ ++ ++ +D + + + K +++ + V + +
Sbjct: 15 SYEAILSGIEETFAQFSIPYDKEKVREFIFKYSVQDLLVRVAEDRNLDVEV-LNQVRAQS 73
Query: 62 FSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD 121
++ +V +PGA ++ G+ + ++ + + S
Sbjct: 74 LAEKNAQVVLMPGAREVLAWADESGIQQFIYTHKGNNAFTILKDLGVESYFTEILTSQSG 133
Query: 122 EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYT 181
VR KPSP+ + + ++ I D + V + +G++ +
Sbjct: 134 FVR--KPSPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINF------LESTY 185
Query: 182 AADEVINSLLDLRP 195
+ I +L D+
Sbjct: 186 EGNHRIQALADISR 199
>d2feaa1 c.108.1.20 (A:2-227)
2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate
phosphatase MtnX {Bacillus subtilis [TaxId: 1423]}
Length = 226
Score = 47.7 bits (112), Expect = 5e-07
Identities = 24/215 (11%), Positives = 58/215 (26%), Gaps = 21/215 (9%)
Query: 7 SEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHL 66
++ + + + E + + +I + + E + F
Sbjct: 18 NDNIINIMKTFAPP----EWMALKDGVLSKTLSIKEGVGRMFGLLPSSLKEEITSFVLED 73
Query: 67 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF---SVIVGSDEV 123
K++ G + ++ H +P + S + + +D +
Sbjct: 74 AKIR--EGFREFVAFINEHEIPFYVISGGMD-FFVYPLLEGIVEKDRIYCNHASFDNDYI 130
Query: 124 RT----------GKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL 173
L+ ++I DSV V A K + + A L
Sbjct: 131 HIDWPHSCKGTCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDL-CFARDYL 189
Query: 174 PKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIE 208
+ ++R E + Q+W++
Sbjct: 190 LNECREQNLNHLPYQDFYEIRKEIENVKEVQEWLQ 224
>d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase
{Lactobacillus plantarum [TaxId: 1590]}
Length = 207
Score = 46.8 bits (109), Expect = 9e-07
Identities = 33/192 (17%), Positives = 65/192 (33%), Gaps = 5/192 (2%)
Query: 2 TDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSM 61
+ ++ V++ L YGK + + K + E F + +
Sbjct: 17 SQPAYTTVMREVLATYGKPFSPAQAQKTFPMAA---EQAMTELGIAASEFDHFQAQYEDV 73
Query: 62 FSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD 121
+ H +++ PG L + L S R + + +V + +D
Sbjct: 74 MASHYDQIELYPGITSLFEQLPSELRLGI--VTSQRRNELESGMRSYPFMMRMAVTISAD 131
Query: 122 EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYT 181
+ KP P L A +++N+ P ++L I DSV +AA ++ +
Sbjct: 132 DTPKRKPDPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQ 191
Query: 182 AADEVINSLLDL 193
LD+
Sbjct: 192 KVAHRFQKPLDI 203
>d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph
{Haemophilus somnus [TaxId: 731]}
Length = 224
Score = 44.5 bits (103), Expect = 6e-06
Identities = 29/203 (14%), Positives = 62/203 (30%), Gaps = 12/203 (5%)
Query: 2 TDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSM 61
+ + + + L + + D+ A+ E + +
Sbjct: 18 SLPDLALSINSALKDVNLPQASENLVMTWIGNGADVLSQRAVDWACKQAEKELTEDEFKY 77
Query: 62 FSD---------HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE 112
F + P ++ L G +A+ +N ++ + G +
Sbjct: 78 FKRQFGFYYGENLCNISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPIL-TAFGIDH 136
Query: 113 SFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 172
FS ++G + KP P F + + P L + DS + A +AG VV +
Sbjct: 137 LFSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTY 196
Query: 173 --LPKQTHRYTAADEVINSLLDL 193
+ D + + D+
Sbjct: 197 GYNYNIPIAQSKPDWIFDDFADI 219
>d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium
tepidum [TaxId: 1097]}
Length = 228
Score = 43.2 bits (100), Expect = 2e-05
Identities = 30/204 (14%), Positives = 59/204 (28%), Gaps = 12/204 (5%)
Query: 2 TDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAK-HEFVNEVYS 60
+ M VL L++ H GK ++ + GL A+ + ++
Sbjct: 16 VESMNRRVLADALIEVYGTEGSTGSHDFSGKMDGAIIYEVLSNVGLERAEIADKFDKAKE 75
Query: 61 MFSDHL------CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF 114
+ + L G L+ LS + + G + F
Sbjct: 76 TYIALFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYF 135
Query: 115 SVIVGSDEVRTGKPSPDIFLEAA---KRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVP 171
+D+ P I LE A N PS ++I D+ + + +AV
Sbjct: 136 PFGAFADDALDRNELPHIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVA 195
Query: 172 S--LPKQTHRYTAADEVINSLLDL 193
+ + + + +
Sbjct: 196 TGNFTMEELARHKPGTLFKNFAET 219
>d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional
protein HisB, phosphatase domain {Escherichia coli
[TaxId: 562]}
Length = 161
Score = 41.4 bits (96), Expect = 3e-05
Identities = 17/129 (13%), Positives = 32/129 (24%), Gaps = 17/129 (13%)
Query: 59 YSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRA-----------------TIE 101
D K+ PG + L G + + +N
Sbjct: 19 SDFQVDRFDKLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQI 78
Query: 102 SKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGK 161
+ +DE KP + M+ ++S VI D + +
Sbjct: 79 FTSQGVQFDEVLICPHLPADECDCRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAE 138
Query: 162 AAGMEVVAV 170
G+ +
Sbjct: 139 NMGINGLRY 147
>d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon
Pyrococcus horikoshii [TaxId: 53953]}
Length = 230
Score = 38.3 bits (87), Expect = 8e-04
Identities = 20/158 (12%), Positives = 49/158 (31%), Gaps = 5/158 (3%)
Query: 36 EEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNS 95
E + E YG + F M + + P ++K L + + ++S
Sbjct: 70 EVMRKLAEKYGFKYPE-NFWEIHLRMHQRYG---ELYPEVVEVLKSLKGK-YHVGMITDS 124
Query: 96 HRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVI 155
+ + + + S+ + L K + V ++ V
Sbjct: 125 DTEYLMAHLDALGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEAVYVGDNPVK 184
Query: 156 GVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 193
K GM + + ++ + D +++ L ++
Sbjct: 185 DCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSDLREV 222
>d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 247
Score = 36.8 bits (83), Expect = 0.002
Identities = 20/156 (12%), Positives = 50/156 (32%), Gaps = 6/156 (3%)
Query: 42 VEDYGLPCAKHEFVNEVYSMFSDHLCK-VKALPGANRLIKHLSCHGVPMALASNSHRATI 100
+++ + E Y ++ + + ++ L + L + +
Sbjct: 80 IQETKGGADNRKLAEECYFLWKSTRLQHMILADDVKAMLTELRKEVRLLLLTNGDRQTQR 139
Query: 101 ESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVI-GVVA 159
E + VI G + PS L ++P +++ D++ +
Sbjct: 140 EKIEACACQSYFDAIVIGGEQKEEKPAPSIFYH--CCDLLGVQPGDCVMVGDTLETDIQG 197
Query: 160 GKAAGMEVVAV--PSLPKQTHRYTAADEVINSLLDL 193
G AG++ S +++S+L+L
Sbjct: 198 GLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLEL 233
>d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559
{Mesorhizobium loti [TaxId: 381]}
Length = 209
Score = 35.7 bits (81), Expect = 0.004
Identities = 27/163 (16%), Positives = 52/163 (31%), Gaps = 13/163 (7%)
Query: 40 IIVEDYGLPCAKHEFV-----NEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASN 94
I D P E V + + V + + + + A+
Sbjct: 33 TINVDTDYPSDPAEIVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGR 92
Query: 95 SHR----ATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVI 150
+ + ++E+ + + KP+P + +EA KRL ++ SL++
Sbjct: 93 VLELLREEGVFVDMVLACAYHEAGVGPLAIPDHPMRKPNPGMLVEAGKRLALDLQRSLIV 152
Query: 151 EDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 193
D + + AGK AG+ + I L D
Sbjct: 153 GDKLADMQAGKRAGLAQGWLVD----GEAAVQPGFAIRPLRDS 191
>d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104
{Streptococcus pneumoniae [TaxId: 1313]}
Length = 210
Score = 34.8 bits (78), Expect = 0.009
Identities = 7/56 (12%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Query: 140 LNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS--LPKQTHRYTAADEVINSLLDL 193
+ P +++I D+ ++ + G++ +A+ + D + + L++
Sbjct: 150 HQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEV 205
>d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate
phosphatase GmhB {Escherichia coli [TaxId: 562]}
Length = 182
Score = 33.4 bits (75), Expect = 0.019
Identities = 30/152 (19%), Positives = 51/152 (33%), Gaps = 26/152 (17%)
Query: 68 KVKALPGANRLIKHLSCHGVPMALASNS-HRATIESKISYQHGWN--------------- 111
+ + G ++ L G + + +N A + +
Sbjct: 25 NFEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLD 84
Query: 112 --------ESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA 163
SV KP P + L A L+++ ++S ++ D + + A AA
Sbjct: 85 GIYYCPHHPQGSVEEFRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAA 144
Query: 164 -GMEVVAVPS-LPKQTHRYTAADEVINSLLDL 193
V V + P AAD V+NSL DL
Sbjct: 145 NVGTKVLVRTGKPITPEAENAADWVLNSLADL 176
>d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 355
Score = 30.2 bits (67), Expect = 0.37
Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 12/63 (19%)
Query: 30 VGKTPLEEAAIIVEDYGLPC---AKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHG 86
+G TP+ I + +GL C AK EF N S VK + R+I+ G
Sbjct: 42 IGDTPMVRINKIGKKFGLKCELLAKCEFFNAGGS--------VKDR-ISLRMIEDAERDG 92
Query: 87 VPM 89
Sbjct: 93 TLK 95
>d1zxoa1 c.55.1.5 (A:3-106) Hypothetical protein BT3618 {Bacteroides
thetaiotaomicron [TaxId: 818]}
Length = 104
Score = 27.8 bits (62), Expect = 0.70
Identities = 11/52 (21%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Query: 260 WAGLSTRGVYKMVMSIGWNPYFDNAEKTIEPWLLHEFDEDFYDEELHLVIVG 311
W + V K + + G NP+F + E+ I+ L + + + V
Sbjct: 12 WCVVLNGAVIKRLGTKGINPFFQSEEE-IQQKLTASLLPQLPEGKFNAVYFY 62
>d1beda_ c.47.1.13 (A:) Disulfide-bond formation facilitator (DsbA)
{Vibrio cholerae [TaxId: 666]}
Length = 181
Score = 28.8 bits (63), Expect = 0.75
Identities = 21/182 (11%), Positives = 47/182 (25%), Gaps = 22/182 (12%)
Query: 26 KHKIVGKTPLEEAAIIVE--DYGLP-CAKHEFVNE--VYSMFSDHLCKVKALPGANRLIK 80
+H V KTP + ++ E + P C E + + + + +
Sbjct: 7 EHYQVLKTPASSSPVVSEFFSFYCPHCNTFEPIIAQLKQQLPEGAKFQKNHVSFMGGNMG 66
Query: 81 HLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRL 140
+A + + H + + + +
Sbjct: 67 QAMSKAYATMIALEVEDKMVPVMFNRIHTLRKPPKDE--QELRQIFLDEGIDAAKFDAAY 124
Query: 141 NMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL---------PKQTHRYTAADEVINSLL 191
N S+V +G + VP++ + +++N LL
Sbjct: 125 NGFAVDSMVRRFDKQFQDSG------LTGVPAVVVNNRYLVQGQSVKSLDEYFDLVNYLL 178
Query: 192 DL 193
L
Sbjct: 179 TL 180
>d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 291
Score = 28.4 bits (63), Expect = 1.3
Identities = 8/36 (22%), Positives = 12/36 (33%)
Query: 67 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIES 102
V G L HG+P+ + S +E
Sbjct: 132 SDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEE 167
>d2bhga1 b.47.1.4 (A:7-205) 3C cysteine protease (picornain 3C)
{Foot-and-mouth disease virus FMDV [TaxId: 12110]}
Length = 199
Score = 28.1 bits (62), Expect = 1.4
Identities = 9/45 (20%), Positives = 16/45 (35%)
Query: 202 PFQDWIEGTLPSEPWYIGGPVVKGLGRGSKVLGIPTANLSTEGYS 246
+ Y GG V+ G + ++G +A + GY
Sbjct: 141 TMPGLFAYKAATRAGYAGGAVLAKDGADTFIVGTHSAGGNGVGYC 185
>d1ve1a1 c.79.1.1 (A:1-302) O-acetylserine sulfhydrylase (Cysteine
synthase) {Thermus thermophilus [TaxId: 274]}
Length = 302
Score = 28.4 bits (62), Expect = 1.5
Identities = 18/78 (23%), Positives = 31/78 (39%), Gaps = 11/78 (14%)
Query: 30 VGKTPLEEAAIIVEDYGLPC-AKHEFVNEV--------YSMFSDHLCKVKALPGANRLI- 79
+GKTP+ A +VE K E +N + M D + PG+ ++I
Sbjct: 7 IGKTPVVRLAKVVEPDMAEVWVKLEGLNPGGSIKDRPAWYMIKDAEERGILRPGSGQVIV 66
Query: 80 -KHLSCHGVPMALASNSH 96
G+ +A+ + S
Sbjct: 67 EPTSGNTGIGLAMIAASR 84
>d1ve5a1 c.79.1.1 (A:2-311) Threonine deaminase {Thermus
thermophilus [TaxId: 274]}
Length = 310
Score = 28.0 bits (61), Expect = 2.0
Identities = 15/85 (17%), Positives = 29/85 (34%), Gaps = 5/85 (5%)
Query: 28 KIVGKTPLEEAAIIVEDYGLPC-AKHEFVNEVYSMFSD--HLCKVKALPGANRLIKHLSC 84
+TPL + ++ G K E + + S F L K AL L+ S
Sbjct: 15 PYTHRTPLLTSRLLDGLLGKRLLLKAEHLQKTGS-FKARGALSKALALENPKGLLAVSSG 73
Query: 85 HGVPMALASNSHRATIESKISYQHG 109
+ +A + +++ +
Sbjct: 74 NHA-QGVAYAAQVLGVKALVVMPED 97
>d2bhsa1 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (Cysteine
synthase) {Escherichia coli, isoform B (CysM) [TaxId:
562]}
Length = 292
Score = 27.6 bits (60), Expect = 2.2
Identities = 15/58 (25%), Positives = 19/58 (32%), Gaps = 10/58 (17%)
Query: 30 VGKTPLEEAAIIVEDYGLPC-AKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHG 86
+G TPL + + D G K E N S VK A +I G
Sbjct: 7 IGNTPLVKLQRMGPDNGSEVWLKLEGNNPAGS--------VKDR-AALSMIVEAEKRG 55
>d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA
{Escherichia coli [TaxId: 562]}
Length = 209
Score = 27.2 bits (60), Expect = 2.8
Identities = 13/115 (11%), Positives = 31/115 (26%), Gaps = 8/115 (6%)
Query: 67 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISY-QHGWNESFSVIVGSD-EVR 124
A +LI G + + E+ ++ +
Sbjct: 83 EFSIPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFH--IPATNMNPVIFA 140
Query: 125 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR 179
KP + + + N+ + DS + A + G + + T++
Sbjct: 141 GDKPGQNTKSQWLQDKNIR----IFYGDSDNDITAARDVGARGIRILRASNSTYK 191
>d1ug3a1 a.118.1.14 (A:1235-1427) Eukaryotic initiation factor
eIF4G {Human (Homo sapiens) [TaxId: 9606]}
Length = 193
Score = 26.7 bits (59), Expect = 3.8
Identities = 10/53 (18%), Positives = 18/53 (33%), Gaps = 2/53 (3%)
Query: 35 LEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGV 87
++EA V++ P FV + + +L+ L C G
Sbjct: 26 MKEAVQCVQELASPSLLFIFVRHGVESTLERSAIAREH--MGQLLHQLLCAGH 76
>d1v71a1 c.79.1.1 (A:6-323) Hypothetical protein C320.14
(SPCC320.14, SPCC330.15c) {Fission yeast
(Schizosaccharomyces pombe) [TaxId: 4896]}
Length = 318
Score = 26.8 bits (58), Expect = 3.8
Identities = 15/135 (11%), Positives = 40/135 (29%), Gaps = 22/135 (16%)
Query: 29 IVGKTPLEEAAIIVEDYGLPC-AKHEFVNEVYSMFSDHLCKVKALPGANRLIKHL----- 82
KTP+ ++ + +++ K E ++ + K N L +
Sbjct: 18 FANKTPVLTSSTVNKEFVAEVFFKCENFQKMGA--------FKFRGALNALSQLNEAQRK 69
Query: 83 --------SCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFL 134
H +AL++ + + + + +V D
Sbjct: 70 AGVLTFSSGNHAQAIALSAKILGIPAKIIMPLDAPEAKVAATKGYGGQVIMYDRYKDDRE 129
Query: 135 EAAKRLNMEPSSSLV 149
+ AK ++ +++
Sbjct: 130 KMAKEISEREGLTII 144
>d1tyza_ c.79.1.1 (A:) 1-aminocyclopropane-1-carboxylate deaminase
{Pseudomonas sp., strain ACP [TaxId: 306]}
Length = 338
Score = 27.0 bits (58), Expect = 3.9
Identities = 14/87 (16%), Positives = 29/87 (33%), Gaps = 10/87 (11%)
Query: 30 VGKTPLEEAAIIVEDYGLPC---AKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLS--C 84
G TP++ A + + G AK E N + + K + + L+ C
Sbjct: 13 FGPTPIQPLARLSKHLGGKVHLYAKREDCNSGLAFGGN-----KTRKLEYLIPEALAQGC 67
Query: 85 HGVPMALASNSHRATIESKISYQHGWN 111
+ S++ + ++ G
Sbjct: 68 DTLVSIGGIQSNQTRQVAAVAAHLGMK 94
>d1nni1_ c.23.5.4 (1:) Azobenzene reductase {Bacillus subtilis
[TaxId: 1423]}
Length = 171
Score = 26.3 bits (57), Expect = 4.0
Identities = 9/47 (19%), Positives = 17/47 (36%)
Query: 307 LVIVGYIRPEANFPSLETLIAKIHEDRKVAERALDLPLYSKYRDDPY 353
LVI G R + IA ++ + LP+++ +
Sbjct: 4 LVINGTPRKHGRTRIAASYIAALYHTDLIDLSEFVLPVFNGEAEQSE 50
>d1f2da_ c.79.1.1 (A:) 1-aminocyclopropane-1-carboxylate deaminase
{Yeast (Hansenula saturnus) [TaxId: 4906]}
Length = 341
Score = 26.6 bits (57), Expect = 4.8
Identities = 14/118 (11%), Positives = 35/118 (29%), Gaps = 13/118 (11%)
Query: 31 GKTPLEEAAIIVEDYGLPC---AKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLS--CH 85
G +P+ + + G AK E N + + K + +
Sbjct: 14 GPSPISNLNRLSQHLGSKVNVYAKREDCNSGLAFGGN-----KLRKLEYIVPDIVEGDYT 68
Query: 86 GVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME 143
+ S++ + + ++ + G V++ D V + D++
Sbjct: 69 HLVSIGGRQSNQTRMVAALAAKLGKK---CVLIQEDWVPIPEAEKDVYNRVGNIELSR 123
>d2h6ma1 b.47.1.4 (A:1-212) 3C cysteine protease (picornain 3C)
{Human hepatitis A virus [TaxId: 208726]}
Length = 212
Score = 26.1 bits (57), Expect = 6.4
Identities = 9/50 (18%), Positives = 18/50 (36%), Gaps = 1/50 (2%)
Query: 202 PFQDWIEGTLPSEPWYIGGPVV-KGLGRGSKVLGIPTANLSTEGYSDVLS 250
G P GG +V + +LGI A ++ + +++
Sbjct: 156 TVDQAWRGKGEGLPGMCGGALVSSNQSIQNAILGIHVAGGNSILVAKLVT 205
>d2nsza1 a.118.1.14 (A:322-450) Programmed cell death 4, PDCD4
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 129
Score = 25.5 bits (56), Expect = 7.1
Identities = 13/55 (23%), Positives = 21/55 (38%), Gaps = 5/55 (9%)
Query: 35 LEEAAIIVEDYGLPCAKHEFVNE--VYSMFSDHLCKVKALPGANRLIKHLSCHGV 87
+ EA +++ +P HE V E V + S K + L+K L
Sbjct: 23 ISEAEHCLKELEVPHFHHELVYEAIVMVLESTGESAFKMI---LDLLKSLWKSST 74
>d2cr9a1 d.297.1.1 (A:8-133) Poly [ADP-ribose] polymerase-1, PARP-1
{Human (Homo sapiens) [TaxId: 9606]}
Length = 126
Score = 25.2 bits (55), Expect = 9.0
Identities = 9/31 (29%), Positives = 12/31 (38%), Gaps = 1/31 (3%)
Query: 7 SEVLKTFLVKYGKEWDGREKHKIVGK-TPLE 36
+K + K G W + K K PLE
Sbjct: 95 EHFMKLYEEKTGNAWHSKNFTKYPKKFYPLE 125
>d1eexa_ c.1.19.3 (A:) Diol dehydratase, alpha subunit {Klebsiella
oxytoca [TaxId: 571]}
Length = 551
Score = 25.9 bits (57), Expect = 9.6
Identities = 6/30 (20%), Positives = 15/30 (50%)
Query: 314 RPEANFPSLETLIAKIHEDRKVAERALDLP 343
+P ++F ++ IA+ + AE + +
Sbjct: 54 KPVSDFDLIDHFIARYGINLNRAEEVMAMD 83
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.316 0.136 0.414
Gapped
Lambda K H
0.267 0.0442 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,435,008
Number of extensions: 69314
Number of successful extensions: 237
Number of sequences better than 10.0: 1
Number of HSP's gapped: 232
Number of HSP's successfully gapped: 49
Length of query: 362
Length of database: 2,407,596
Length adjustment: 86
Effective length of query: 276
Effective length of database: 1,226,816
Effective search space: 338601216
Effective search space used: 338601216
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 53 (24.9 bits)