Query 017997
Match_columns 362
No_of_seqs 349 out of 3181
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 08:16:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017997.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017997hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vtf_A UDP-glucose 6-dehydroge 100.0 9.1E-85 3.1E-89 631.2 40.4 342 1-358 21-367 (444)
2 4a7p_A UDP-glucose dehydrogena 100.0 9.6E-78 3.3E-82 587.2 41.3 344 2-358 9-356 (446)
3 3ojo_A CAP5O; rossmann fold, c 100.0 4.8E-76 1.6E-80 571.3 36.8 334 2-358 12-350 (431)
4 3gg2_A Sugar dehydrogenase, UD 100.0 3.1E-74 1.1E-78 565.2 40.7 344 2-358 3-352 (450)
5 3g79_A NDP-N-acetyl-D-galactos 100.0 4.4E-74 1.5E-78 564.3 37.3 347 1-358 18-387 (478)
6 3pid_A UDP-glucose 6-dehydroge 100.0 1.3E-73 4.4E-78 553.3 33.9 329 1-358 36-366 (432)
7 2o3j_A UDP-glucose 6-dehydroge 100.0 2.9E-71 1E-75 549.3 43.0 358 1-358 9-369 (481)
8 2y0c_A BCEC, UDP-glucose dehyd 100.0 1.7E-69 5.9E-74 535.3 39.9 348 2-358 9-362 (478)
9 2q3e_A UDP-glucose 6-dehydroge 100.0 1.5E-68 5.2E-73 528.8 43.1 358 1-358 5-363 (467)
10 1dlj_A UDP-glucose dehydrogena 100.0 2.1E-66 7.2E-71 504.1 35.6 338 2-358 1-343 (402)
11 1mv8_A GMD, GDP-mannose 6-dehy 100.0 4.5E-65 1.5E-69 500.3 38.6 337 2-358 1-347 (436)
12 3qha_A Putative oxidoreductase 100.0 1.2E-33 4E-38 263.5 23.4 251 2-303 16-283 (296)
13 4dll_A 2-hydroxy-3-oxopropiona 100.0 4.8E-33 1.6E-37 262.2 24.3 252 1-303 31-293 (320)
14 3doj_A AT3G25530, dehydrogenas 100.0 3.1E-33 1.1E-37 262.4 22.4 254 1-304 21-286 (310)
15 3obb_A Probable 3-hydroxyisobu 100.0 7E-33 2.4E-37 258.1 23.8 252 1-302 3-273 (300)
16 4gbj_A 6-phosphogluconate dehy 100.0 2.5E-32 8.5E-37 254.3 23.4 250 3-302 7-268 (297)
17 3pef_A 6-phosphogluconate dehy 100.0 2.5E-32 8.6E-37 253.4 22.4 254 1-304 1-266 (287)
18 3pdu_A 3-hydroxyisobutyrate de 100.0 2.1E-32 7E-37 254.0 20.1 254 1-304 1-266 (287)
19 3g0o_A 3-hydroxyisobutyrate de 100.0 8.9E-32 3E-36 251.6 23.8 254 2-304 8-274 (303)
20 2h78_A Hibadh, 3-hydroxyisobut 100.0 3.2E-31 1.1E-35 247.6 24.0 253 1-303 3-274 (302)
21 4ezb_A Uncharacterized conserv 100.0 1.4E-29 4.7E-34 238.1 19.7 242 1-302 24-283 (317)
22 3qsg_A NAD-binding phosphogluc 100.0 4.3E-29 1.5E-33 234.3 19.7 250 1-306 24-285 (312)
23 3l6d_A Putative oxidoreductase 100.0 3.2E-27 1.1E-31 221.0 21.7 248 2-304 10-274 (306)
24 1vpd_A Tartronate semialdehyde 100.0 1.7E-26 5.6E-31 215.2 24.2 252 2-303 6-269 (299)
25 4e21_A 6-phosphogluconate dehy 100.0 2.3E-26 8E-31 218.9 24.8 264 2-318 23-347 (358)
26 1yb4_A Tartronic semialdehyde 99.9 1.2E-26 4.1E-31 215.6 19.7 253 1-304 3-267 (295)
27 2gf2_A Hibadh, 3-hydroxyisobut 99.9 2.1E-25 7.3E-30 207.3 23.6 252 2-303 1-271 (296)
28 3k96_A Glycerol-3-phosphate de 99.9 6.2E-26 2.1E-30 216.1 19.7 277 2-314 30-348 (356)
29 3cky_A 2-hydroxymethyl glutara 99.9 9.6E-25 3.3E-29 203.4 27.0 253 2-304 5-270 (301)
30 2uyy_A N-PAC protein; long-cha 99.9 1.7E-24 5.8E-29 203.3 21.8 252 2-303 31-294 (316)
31 4gwg_A 6-phosphogluconate dehy 99.9 9.3E-25 3.2E-29 214.6 20.7 207 1-251 4-221 (484)
32 2cvz_A Dehydrogenase, 3-hydrox 99.9 1.4E-24 4.8E-29 201.0 20.5 251 1-304 1-261 (289)
33 2p4q_A 6-phosphogluconate dehy 99.9 7.6E-23 2.6E-27 202.6 21.8 252 2-299 11-290 (497)
34 1txg_A Glycerol-3-phosphate de 99.9 1.6E-22 5.5E-27 191.0 22.6 275 2-314 1-331 (335)
35 1yj8_A Glycerol-3-phosphate de 99.9 2E-23 6.9E-28 200.6 15.5 270 1-305 21-354 (375)
36 1evy_A Glycerol-3-phosphate de 99.9 1.1E-23 3.7E-28 201.8 12.9 278 3-315 17-343 (366)
37 2pgd_A 6-phosphogluconate dehy 99.9 4.8E-22 1.7E-26 196.8 22.5 249 2-297 3-281 (482)
38 1i36_A Conserved hypothetical 99.9 3E-22 1E-26 183.1 18.3 235 2-304 1-247 (264)
39 1x0v_A GPD-C, GPDH-C, glycerol 99.9 8.8E-23 3E-27 194.5 15.1 268 2-304 9-335 (354)
40 1pgj_A 6PGDH, 6-PGDH, 6-phosph 99.9 2.2E-21 7.6E-26 191.6 25.4 256 2-300 2-286 (478)
41 2zyd_A 6-phosphogluconate dehy 99.9 5.8E-22 2E-26 195.7 21.2 251 2-299 16-295 (480)
42 2iz1_A 6-phosphogluconate dehy 99.9 1.5E-21 5.2E-26 192.8 22.4 249 2-299 6-287 (474)
43 1z82_A Glycerol-3-phosphate de 99.9 3.2E-22 1.1E-26 189.4 15.2 259 2-305 15-312 (335)
44 2ew2_A 2-dehydropantoate 2-red 99.9 2.2E-21 7.6E-26 181.3 20.4 268 1-301 3-304 (316)
45 3dtt_A NADP oxidoreductase; st 99.8 2E-19 6.8E-24 162.7 13.9 197 2-229 20-234 (245)
46 2g5c_A Prephenate dehydrogenas 99.8 2.1E-17 7.1E-22 152.3 27.4 196 1-235 1-200 (281)
47 2dpo_A L-gulonate 3-dehydrogen 99.8 1E-18 3.5E-23 163.6 17.9 206 1-254 6-227 (319)
48 1zej_A HBD-9, 3-hydroxyacyl-CO 99.8 5.1E-19 1.8E-23 163.4 14.6 192 2-254 13-207 (293)
49 3mog_A Probable 3-hydroxybutyr 99.8 1.4E-18 4.7E-23 171.4 16.1 209 2-253 6-222 (483)
50 1ks9_A KPA reductase;, 2-dehyd 99.8 5.1E-19 1.7E-23 163.4 11.8 256 2-301 1-283 (291)
51 3k6j_A Protein F01G10.3, confi 99.8 5.4E-18 1.8E-22 165.2 18.9 202 1-252 54-267 (460)
52 3ggo_A Prephenate dehydrogenas 99.8 1.1E-16 3.7E-21 149.9 27.1 188 2-233 34-230 (314)
53 1f0y_A HCDH, L-3-hydroxyacyl-C 99.8 7.9E-18 2.7E-22 156.8 18.3 207 1-253 15-238 (302)
54 2qyt_A 2-dehydropantoate 2-red 99.8 5.7E-18 2E-22 158.4 17.4 267 2-300 9-308 (317)
55 4fgw_A Glycerol-3-phosphate de 99.8 3.1E-18 1.1E-22 163.4 15.0 219 2-250 35-296 (391)
56 3ghy_A Ketopantoate reductase 99.8 1.4E-17 4.9E-22 157.4 18.8 265 1-298 3-312 (335)
57 1bg6_A N-(1-D-carboxylethyl)-L 99.8 6.5E-18 2.2E-22 160.8 15.3 293 2-343 5-356 (359)
58 4e12_A Diketoreductase; oxidor 99.8 6.3E-17 2.2E-21 149.4 20.7 205 2-253 5-224 (283)
59 3ado_A Lambda-crystallin; L-gu 99.7 1.7E-17 5.8E-22 154.6 15.1 205 2-254 7-227 (319)
60 2wtb_A MFP2, fatty acid multif 99.7 2.2E-17 7.7E-22 170.4 16.3 207 1-251 312-526 (725)
61 3b1f_A Putative prephenate deh 99.7 2E-16 6.8E-21 146.4 20.1 175 1-213 6-185 (290)
62 1wdk_A Fatty oxidation complex 99.7 2.8E-17 9.7E-22 169.5 15.9 203 1-251 314-528 (715)
63 2f1k_A Prephenate dehydrogenas 99.7 3.9E-16 1.3E-20 143.5 21.6 190 2-231 1-190 (279)
64 3d1l_A Putative NADP oxidoredu 99.7 4.9E-16 1.7E-20 141.9 19.5 197 2-253 11-212 (266)
65 3gt0_A Pyrroline-5-carboxylate 99.7 1.1E-15 3.7E-20 138.2 20.6 196 1-253 2-206 (247)
66 1zcj_A Peroxisomal bifunctiona 99.7 4.8E-16 1.6E-20 153.0 18.6 205 1-252 37-250 (463)
67 3c24_A Putative oxidoreductase 99.7 5E-16 1.7E-20 143.5 16.8 203 1-252 11-229 (286)
68 3hwr_A 2-dehydropantoate 2-red 99.7 4.4E-16 1.5E-20 146.0 16.7 253 1-298 19-303 (318)
69 3hn2_A 2-dehydropantoate 2-red 99.7 3.1E-15 1.1E-19 139.9 21.3 258 2-297 3-293 (312)
70 2izz_A Pyrroline-5-carboxylate 99.7 2.2E-15 7.6E-20 141.5 19.9 244 1-307 22-288 (322)
71 3i83_A 2-dehydropantoate 2-red 99.7 1.3E-15 4.3E-20 143.0 16.5 258 2-298 3-293 (320)
72 2pv7_A T-protein [includes: ch 99.7 2.7E-15 9.2E-20 139.4 16.8 179 2-249 22-203 (298)
73 3tri_A Pyrroline-5-carboxylate 99.6 1.8E-14 6.1E-19 132.7 21.3 197 2-252 4-207 (280)
74 3ktd_A Prephenate dehydrogenas 99.6 6.8E-15 2.3E-19 138.7 17.9 186 1-231 8-210 (341)
75 2ahr_A Putative pyrroline carb 99.6 1.2E-14 4.2E-19 132.0 18.0 193 1-253 3-199 (259)
76 1jay_A Coenzyme F420H2:NADP+ o 99.6 8.1E-15 2.8E-19 129.1 14.5 185 2-226 1-199 (212)
77 1yqg_A Pyrroline-5-carboxylate 99.6 1.4E-14 4.8E-19 131.8 15.6 190 2-252 1-197 (263)
78 2rcy_A Pyrroline carboxylate r 99.6 2.3E-14 7.9E-19 130.3 16.4 187 2-252 5-199 (262)
79 3c7a_A Octopine dehydrogenase; 99.6 8.1E-14 2.8E-18 134.8 19.8 219 1-244 2-269 (404)
80 2raf_A Putative dinucleotide-b 99.6 2.3E-14 7.7E-19 126.3 13.5 155 1-222 19-190 (209)
81 3zwc_A Peroxisomal bifunctiona 99.6 8.5E-15 2.9E-19 150.6 12.3 203 1-251 316-528 (742)
82 3g17_A Similar to 2-dehydropan 99.6 3.7E-14 1.3E-18 131.4 14.1 191 2-243 3-216 (294)
83 4huj_A Uncharacterized protein 99.5 9.6E-14 3.3E-18 123.2 9.1 166 1-214 23-204 (220)
84 1np3_A Ketol-acid reductoisome 99.4 1.4E-12 4.7E-17 123.2 12.7 167 2-220 17-195 (338)
85 2vns_A Metalloreductase steap3 99.4 3.5E-12 1.2E-16 112.7 13.7 169 1-217 28-203 (215)
86 3ego_A Probable 2-dehydropanto 99.4 2.1E-12 7.1E-17 120.4 11.0 199 2-240 3-226 (307)
87 2i76_A Hypothetical protein; N 99.4 1.2E-12 3.9E-17 120.2 8.9 183 1-245 2-190 (276)
88 2gcg_A Glyoxylate reductase/hy 99.3 6.4E-12 2.2E-16 118.2 12.6 135 2-177 156-293 (330)
89 3dfu_A Uncharacterized protein 99.3 9.7E-11 3.3E-15 103.9 16.4 155 2-239 7-162 (232)
90 2dbq_A Glyoxylate reductase; D 99.3 9.1E-12 3.1E-16 117.3 10.3 133 2-177 151-286 (334)
91 2yjz_A Metalloreductase steap4 98.9 5.8E-13 2E-17 116.5 0.0 166 2-218 20-192 (201)
92 1guz_A Malate dehydrogenase; o 99.2 2.5E-11 8.6E-16 113.2 10.5 121 2-137 1-127 (310)
93 2w2k_A D-mandelate dehydrogena 99.2 1.7E-11 5.9E-16 116.0 9.4 109 2-144 164-273 (348)
94 1pzg_A LDH, lactate dehydrogen 99.2 1.9E-10 6.6E-15 108.1 13.9 123 2-137 10-141 (331)
95 1t2d_A LDH-P, L-lactate dehydr 99.1 3.4E-10 1.2E-14 105.9 13.4 123 2-137 5-135 (322)
96 3ba1_A HPPR, hydroxyphenylpyru 99.1 1.2E-10 3.9E-15 109.5 10.1 104 2-144 165-268 (333)
97 2hjr_A Malate dehydrogenase; m 99.1 5.8E-10 2E-14 104.7 14.2 117 2-135 15-138 (328)
98 3gvx_A Glycerate dehydrogenase 99.1 1.1E-10 3.7E-15 107.4 8.8 104 2-144 123-226 (290)
99 2d0i_A Dehydrogenase; structur 99.1 3E-10 1E-14 106.8 11.5 132 2-177 147-282 (333)
100 1hyh_A L-hicdh, L-2-hydroxyiso 99.1 5.7E-10 1.9E-14 103.9 12.9 120 1-137 1-131 (309)
101 3gg9_A D-3-phosphoglycerate de 99.1 9.8E-10 3.4E-14 103.8 13.5 108 2-144 161-268 (352)
102 1gdh_A D-glycerate dehydrogena 99.1 5.6E-10 1.9E-14 104.4 11.6 107 2-144 147-255 (320)
103 1ur5_A Malate dehydrogenase; o 99.1 9.8E-10 3.4E-14 102.3 13.2 119 2-137 3-128 (309)
104 3jtm_A Formate dehydrogenase, 99.1 3.5E-10 1.2E-14 106.8 9.6 109 2-144 165-273 (351)
105 2ekl_A D-3-phosphoglycerate de 99.1 5.2E-10 1.8E-14 104.3 10.0 107 2-144 143-249 (313)
106 4g2n_A D-isomer specific 2-hyd 99.1 1.5E-09 5.1E-14 102.2 13.2 107 2-144 174-280 (345)
107 1wwk_A Phosphoglycerate dehydr 99.1 1.5E-09 5.3E-14 100.8 13.1 107 2-144 143-249 (307)
108 3evt_A Phosphoglycerate dehydr 99.0 4.4E-10 1.5E-14 105.0 8.6 135 2-176 138-273 (324)
109 1lld_A L-lactate dehydrogenase 99.0 2.3E-09 8E-14 100.0 13.4 118 1-138 7-134 (319)
110 1a5z_A L-lactate dehydrogenase 99.0 2.8E-09 9.6E-14 99.6 13.8 118 2-137 1-125 (319)
111 4dgs_A Dehydrogenase; structur 99.0 1.4E-09 4.7E-14 102.2 10.9 103 2-144 172-275 (340)
112 1ygy_A PGDH, D-3-phosphoglycer 99.0 2.7E-09 9.3E-14 106.4 12.9 105 2-143 143-248 (529)
113 1y6j_A L-lactate dehydrogenase 99.0 3.2E-09 1.1E-13 99.1 12.3 115 2-137 8-132 (318)
114 2g76_A 3-PGDH, D-3-phosphoglyc 99.0 4.9E-09 1.7E-13 98.4 13.3 107 2-144 166-272 (335)
115 2ewd_A Lactate dehydrogenase,; 99.0 2.6E-09 8.9E-14 99.8 11.4 116 2-133 5-126 (317)
116 1mx3_A CTBP1, C-terminal bindi 99.0 2.8E-09 9.4E-14 100.6 11.4 108 2-144 169-276 (347)
117 4hy3_A Phosphoglycerate oxidor 99.0 8.1E-09 2.8E-13 97.8 14.3 134 2-177 177-312 (365)
118 3fr7_A Putative ketol-acid red 99.0 2.9E-09 1E-13 103.0 11.1 209 1-251 54-281 (525)
119 2nac_A NAD-dependent formate d 99.0 2E-09 6.7E-14 103.0 9.9 108 2-144 192-300 (393)
120 2j6i_A Formate dehydrogenase; 99.0 3.7E-09 1.3E-13 100.5 11.7 109 2-144 165-274 (364)
121 2v6b_A L-LDH, L-lactate dehydr 98.9 3.9E-09 1.3E-13 98.0 11.4 116 2-134 1-122 (304)
122 3k5p_A D-3-phosphoglycerate de 98.9 2.8E-09 9.4E-14 102.4 10.5 105 2-144 157-261 (416)
123 2pi1_A D-lactate dehydrogenase 98.9 4.8E-09 1.7E-13 98.4 11.8 106 2-144 142-247 (334)
124 1qp8_A Formate dehydrogenase; 98.9 1.8E-09 6.2E-14 100.1 8.7 103 2-144 125-227 (303)
125 3hg7_A D-isomer specific 2-hyd 98.9 7.8E-10 2.7E-14 103.2 6.0 136 2-177 141-277 (324)
126 4e5n_A Thermostable phosphite 98.9 4.2E-09 1.4E-13 98.8 10.9 108 2-144 146-253 (330)
127 1oju_A MDH, malate dehydrogena 98.9 1E-08 3.4E-13 94.6 13.2 117 2-134 1-124 (294)
128 1sc6_A PGDH, D-3-phosphoglycer 98.9 5.7E-09 2E-13 100.4 12.0 105 2-144 146-250 (404)
129 3pp8_A Glyoxylate/hydroxypyruv 98.9 6E-10 2.1E-14 103.7 4.8 107 2-144 140-246 (315)
130 2yq5_A D-isomer specific 2-hyd 98.9 6.7E-09 2.3E-13 97.6 11.8 105 2-144 149-253 (343)
131 3d0o_A L-LDH 1, L-lactate dehy 98.9 1.5E-08 5.2E-13 94.5 13.2 121 2-136 7-131 (317)
132 3gvi_A Malate dehydrogenase; N 98.9 1.7E-08 5.7E-13 94.3 12.6 118 1-134 7-130 (324)
133 1j4a_A D-LDH, D-lactate dehydr 98.9 6.5E-09 2.2E-13 97.7 9.3 106 2-144 147-252 (333)
134 1lss_A TRK system potassium up 98.8 1.9E-08 6.4E-13 81.5 10.6 127 2-170 5-136 (140)
135 3pqe_A L-LDH, L-lactate dehydr 98.8 2.2E-08 7.6E-13 93.5 12.3 111 2-134 6-128 (326)
136 2cuk_A Glycerate dehydrogenase 98.8 7.9E-09 2.7E-13 96.1 9.3 100 2-142 145-244 (311)
137 3ldh_A Lactate dehydrogenase; 98.8 4E-08 1.4E-12 91.7 12.8 120 1-134 21-144 (330)
138 3p7m_A Malate dehydrogenase; p 98.8 6.4E-08 2.2E-12 90.3 13.1 118 2-135 6-129 (321)
139 3tl2_A Malate dehydrogenase; c 98.8 8.9E-08 3E-12 89.1 13.8 117 2-134 9-133 (315)
140 1mld_A Malate dehydrogenase; o 98.8 6.4E-08 2.2E-12 90.1 12.7 112 2-136 1-125 (314)
141 2i99_A MU-crystallin homolog; 98.7 1E-08 3.4E-13 95.6 6.3 106 2-143 136-241 (312)
142 3fi9_A Malate dehydrogenase; s 98.7 9.2E-08 3.1E-12 89.9 12.7 116 2-136 9-134 (343)
143 1smk_A Malate dehydrogenase, g 98.7 6.6E-08 2.3E-12 90.5 11.8 111 1-134 8-131 (326)
144 1obb_A Maltase, alpha-glucosid 98.7 9.9E-08 3.4E-12 93.4 12.8 124 2-135 4-159 (480)
145 1dxy_A D-2-hydroxyisocaproate 98.7 1.8E-08 6.2E-13 94.6 6.9 105 2-144 146-250 (333)
146 3oet_A Erythronate-4-phosphate 98.7 2.8E-08 9.7E-13 94.3 7.5 108 2-144 120-227 (381)
147 1xdw_A NAD+-dependent (R)-2-hy 98.7 2.3E-08 8E-13 93.8 6.8 105 2-144 147-251 (331)
148 1ez4_A Lactate dehydrogenase; 98.7 2E-07 7E-12 86.8 12.9 117 2-136 6-129 (318)
149 2o4c_A Erythronate-4-phosphate 98.7 3.9E-08 1.3E-12 93.6 7.9 108 2-144 117-224 (380)
150 3nep_X Malate dehydrogenase; h 98.6 1.4E-07 4.9E-12 87.5 11.2 118 2-135 1-125 (314)
151 1ldn_A L-lactate dehydrogenase 98.6 5.4E-07 1.8E-11 83.9 15.0 121 1-136 6-131 (316)
152 1u8x_X Maltose-6'-phosphate gl 98.6 1.8E-07 6.3E-12 91.5 12.3 122 2-134 29-177 (472)
153 2xxj_A L-LDH, L-lactate dehydr 98.6 5.3E-07 1.8E-11 83.7 14.7 120 2-137 1-125 (310)
154 2dc1_A L-aspartate dehydrogena 98.6 8.6E-08 3E-12 85.5 8.3 96 2-144 1-101 (236)
155 2i6t_A Ubiquitin-conjugating e 98.6 2E-07 6.8E-12 86.3 10.8 111 1-133 14-130 (303)
156 3ic5_A Putative saccharopine d 98.6 6.3E-08 2.2E-12 75.9 6.2 73 1-87 5-78 (118)
157 3oj0_A Glutr, glutamyl-tRNA re 98.6 4.5E-08 1.5E-12 80.4 5.5 70 2-89 22-91 (144)
158 4aj2_A L-lactate dehydrogenase 98.6 4.3E-07 1.5E-11 84.9 12.6 116 2-134 20-142 (331)
159 2zqz_A L-LDH, L-lactate dehydr 98.6 4.3E-07 1.5E-11 84.9 12.3 114 2-136 10-133 (326)
160 2d4a_B Malate dehydrogenase; a 98.6 7.9E-07 2.7E-11 82.5 14.0 119 3-137 1-125 (308)
161 2ho3_A Oxidoreductase, GFO/IDH 98.6 6.2E-07 2.1E-11 83.7 13.3 70 1-88 1-72 (325)
162 3euw_A MYO-inositol dehydrogen 98.6 3.3E-07 1.1E-11 86.2 11.4 69 2-89 5-76 (344)
163 2hk9_A Shikimate dehydrogenase 98.5 2.6E-07 8.9E-12 84.4 9.8 93 2-128 130-222 (275)
164 4hkt_A Inositol 2-dehydrogenas 98.5 3.7E-07 1.3E-11 85.5 11.1 69 1-89 3-74 (331)
165 2g1u_A Hypothetical protein TM 98.5 5.8E-07 2E-11 74.6 10.6 40 2-43 20-59 (155)
166 3q2i_A Dehydrogenase; rossmann 98.5 3.8E-07 1.3E-11 86.3 10.6 70 2-89 14-86 (354)
167 3vku_A L-LDH, L-lactate dehydr 98.5 5.7E-07 2E-11 83.9 11.7 118 2-134 10-131 (326)
168 1b8p_A Protein (malate dehydro 98.5 8.5E-07 2.9E-11 83.1 12.8 116 2-136 6-141 (329)
169 3uuw_A Putative oxidoreductase 98.5 2.2E-07 7.5E-12 86.1 8.7 69 2-89 7-77 (308)
170 3ezy_A Dehydrogenase; structur 98.5 3.9E-07 1.3E-11 85.8 10.4 71 1-89 2-75 (344)
171 2rir_A Dipicolinate synthase, 98.5 4.8E-07 1.7E-11 83.6 10.6 95 2-133 158-252 (300)
172 1y81_A Conserved hypothetical 98.5 3.2E-07 1.1E-11 74.9 7.9 97 2-144 15-115 (138)
173 2x0j_A Malate dehydrogenase; o 98.5 1.7E-06 6E-11 79.4 13.7 119 2-134 1-124 (294)
174 1s6y_A 6-phospho-beta-glucosid 98.5 4.4E-07 1.5E-11 88.4 10.1 122 2-134 8-158 (450)
175 3d4o_A Dipicolinate synthase s 98.5 1.1E-06 3.6E-11 81.0 12.1 95 2-133 156-250 (293)
176 3llv_A Exopolyphosphatase-rela 98.5 1E-06 3.4E-11 71.7 10.2 43 1-45 6-48 (141)
177 3mz0_A Inositol 2-dehydrogenas 98.4 8.6E-07 2.9E-11 83.4 11.0 71 2-89 3-77 (344)
178 3fef_A Putative glucosidase LP 98.4 6.2E-07 2.1E-11 87.0 10.0 76 2-88 6-85 (450)
179 1x7d_A Ornithine cyclodeaminas 98.4 4E-07 1.4E-11 86.0 7.8 103 2-133 130-232 (350)
180 3db2_A Putative NADPH-dependen 98.4 9E-07 3.1E-11 83.6 10.2 69 2-89 6-77 (354)
181 3fwz_A Inner membrane protein 98.4 2.8E-06 9.6E-11 69.2 11.8 71 2-88 8-81 (140)
182 3c1a_A Putative oxidoreductase 98.4 7.9E-07 2.7E-11 82.6 9.4 66 2-88 11-79 (315)
183 2d5c_A AROE, shikimate 5-dehyd 98.4 4.4E-07 1.5E-11 82.2 7.1 103 3-143 118-220 (263)
184 3e9m_A Oxidoreductase, GFO/IDH 98.4 6.1E-07 2.1E-11 84.0 8.3 70 2-89 6-78 (330)
185 2duw_A Putative COA-binding pr 98.4 5.2E-07 1.8E-11 74.3 6.2 97 2-144 14-116 (145)
186 3cea_A MYO-inositol 2-dehydrog 98.4 2.3E-06 7.8E-11 80.4 11.5 70 2-88 9-81 (346)
187 3e18_A Oxidoreductase; dehydro 98.3 2.5E-06 8.5E-11 80.8 11.1 68 2-89 6-76 (359)
188 1xea_A Oxidoreductase, GFO/IDH 98.3 1.4E-06 4.8E-11 81.2 9.2 70 1-88 2-73 (323)
189 2hmt_A YUAA protein; RCK, KTN, 98.3 2.3E-06 7.8E-11 69.3 9.3 41 2-44 7-47 (144)
190 3ec7_A Putative dehydrogenase; 98.3 2.1E-06 7.1E-11 81.3 10.0 71 2-89 24-98 (357)
191 3qy9_A DHPR, dihydrodipicolina 98.3 1.9E-06 6.6E-11 76.9 9.1 107 1-159 3-110 (243)
192 3rc1_A Sugar 3-ketoreductase; 98.3 2.9E-06 9.8E-11 80.1 10.7 69 2-89 28-100 (350)
193 1o6z_A MDH, malate dehydrogena 98.3 6E-06 2.1E-10 76.3 12.6 117 2-136 1-127 (303)
194 1v8b_A Adenosylhomocysteinase; 98.3 1.9E-06 6.6E-11 84.0 9.5 98 2-139 258-357 (479)
195 2glx_A 1,5-anhydro-D-fructose 98.3 3.2E-06 1.1E-10 79.0 10.7 68 2-88 1-72 (332)
196 3m2t_A Probable dehydrogenase; 98.3 2.6E-06 8.8E-11 80.7 10.0 69 2-88 6-78 (359)
197 3p2y_A Alanine dehydrogenase/p 98.3 1.5E-06 5.1E-11 82.3 8.1 115 2-130 185-305 (381)
198 4dio_A NAD(P) transhydrogenase 98.3 1.5E-06 5.2E-11 82.9 7.9 113 2-128 191-313 (405)
199 1tlt_A Putative oxidoreductase 98.3 2.1E-06 7.2E-11 79.8 8.8 69 2-89 6-76 (319)
200 1omo_A Alanine dehydrogenase; 98.3 1.2E-06 4E-11 81.8 7.0 98 2-133 126-223 (322)
201 3l4b_C TRKA K+ channel protien 98.3 3.9E-06 1.3E-10 73.6 10.0 41 2-44 1-41 (218)
202 3d64_A Adenosylhomocysteinase; 98.3 1.9E-06 6.5E-11 84.4 8.6 90 2-131 278-368 (494)
203 3f4l_A Putative oxidoreductase 98.3 1.1E-06 3.9E-11 82.6 6.8 71 1-89 2-76 (345)
204 1ydw_A AX110P-like protein; st 98.2 8.4E-06 2.9E-10 77.2 12.7 73 1-88 6-81 (362)
205 3c85_A Putative glutathione-re 98.2 2.5E-06 8.6E-11 72.6 8.1 72 2-88 40-115 (183)
206 4had_A Probable oxidoreductase 98.2 4.9E-06 1.7E-10 78.3 10.8 71 1-89 23-97 (350)
207 3evn_A Oxidoreductase, GFO/IDH 98.2 2.8E-06 9.4E-11 79.5 8.8 70 2-89 6-78 (329)
208 3e82_A Putative oxidoreductase 98.2 7.9E-06 2.7E-10 77.5 11.7 67 2-89 8-78 (364)
209 3kb6_A D-lactate dehydrogenase 98.2 1.4E-05 4.9E-10 74.8 12.7 106 2-144 142-247 (334)
210 3hdj_A Probable ornithine cycl 98.2 2E-06 6.8E-11 79.9 6.7 98 2-133 122-219 (313)
211 2p2s_A Putative oxidoreductase 98.2 6.3E-06 2.1E-10 77.2 9.6 69 2-89 5-77 (336)
212 3hhp_A Malate dehydrogenase; M 98.1 1.8E-05 6.1E-10 73.3 12.2 115 2-137 1-127 (312)
213 3ce6_A Adenosylhomocysteinase; 98.1 4.8E-06 1.6E-10 81.8 8.6 90 2-130 275-364 (494)
214 3ohs_X Trans-1,2-dihydrobenzen 98.1 8.5E-06 2.9E-10 76.2 9.9 71 2-89 3-77 (334)
215 3h9u_A Adenosylhomocysteinase; 98.1 1.2E-05 4.1E-10 77.2 10.7 90 2-130 212-301 (436)
216 2z2v_A Hypothetical protein PH 98.1 7E-06 2.4E-10 77.9 8.5 108 2-144 17-124 (365)
217 2egg_A AROE, shikimate 5-dehyd 98.1 7.7E-06 2.6E-10 75.4 8.5 104 2-133 142-246 (297)
218 3bio_A Oxidoreductase, GFO/IDH 98.1 1.6E-05 5.3E-10 73.6 10.4 88 2-129 10-98 (304)
219 3gdo_A Uncharacterized oxidore 98.0 2.9E-05 1E-09 73.4 11.7 67 2-89 6-76 (358)
220 3kux_A Putative oxidoreductase 98.0 2.5E-05 8.5E-10 73.6 11.0 67 2-89 8-78 (352)
221 4f3y_A DHPR, dihydrodipicolina 98.0 5.7E-06 1.9E-10 75.1 6.1 74 1-87 7-82 (272)
222 3moi_A Probable dehydrogenase; 98.0 1.2E-05 4E-10 76.9 8.5 70 1-89 2-75 (387)
223 1zh8_A Oxidoreductase; TM0312, 98.0 2.9E-05 9.9E-10 72.8 10.9 71 2-89 19-93 (340)
224 2ixa_A Alpha-N-acetylgalactosa 98.0 4.1E-05 1.4E-09 74.5 12.0 75 2-89 21-102 (444)
225 1h6d_A Precursor form of gluco 98.0 1.2E-05 4.1E-10 78.1 8.2 73 2-89 84-161 (433)
226 3abi_A Putative uncharacterize 98.0 8.3E-06 2.8E-10 77.4 6.8 71 2-88 17-87 (365)
227 1leh_A Leucine dehydrogenase; 98.0 1.2E-05 4.1E-10 76.0 7.6 111 2-159 174-285 (364)
228 3n58_A Adenosylhomocysteinase; 98.0 1.7E-05 5.9E-10 76.1 8.6 89 2-129 248-336 (464)
229 3u95_A Glycoside hydrolase, fa 98.0 7E-05 2.4E-09 73.4 13.1 78 2-87 1-85 (477)
230 3u3x_A Oxidoreductase; structu 98.0 6.5E-05 2.2E-09 71.0 12.5 68 2-88 27-98 (361)
231 3upl_A Oxidoreductase; rossman 97.9 4.2E-05 1.4E-09 73.9 10.7 87 2-89 24-118 (446)
232 2vhw_A Alanine dehydrogenase; 97.9 8.4E-06 2.9E-10 77.7 5.3 97 2-127 169-268 (377)
233 4gmf_A Yersiniabactin biosynth 97.9 2.2E-05 7.5E-10 74.6 8.1 70 2-90 8-78 (372)
234 1f06_A MESO-diaminopimelate D- 97.9 1.7E-05 5.9E-10 73.8 6.9 64 2-88 4-68 (320)
235 3gvp_A Adenosylhomocysteinase 97.9 3.7E-05 1.3E-09 73.6 9.0 89 2-129 221-309 (435)
236 3l9w_A Glutathione-regulated p 97.9 9E-05 3.1E-09 71.4 11.8 71 2-88 5-78 (413)
237 3fhl_A Putative oxidoreductase 97.9 4.2E-05 1.4E-09 72.3 9.2 67 2-89 6-76 (362)
238 3u62_A Shikimate dehydrogenase 97.9 2.1E-05 7.3E-10 70.6 6.8 67 3-89 110-177 (253)
239 3v5n_A Oxidoreductase; structu 97.9 5.9E-05 2E-09 72.8 10.4 72 2-89 38-121 (417)
240 3don_A Shikimate dehydrogenase 97.9 1.6E-05 5.3E-10 72.5 5.8 98 2-133 118-216 (277)
241 4h7p_A Malate dehydrogenase; s 97.8 0.00017 5.7E-09 67.6 12.8 117 3-134 26-156 (345)
242 3ew7_A LMO0794 protein; Q8Y8U8 97.8 8.4E-05 2.9E-09 64.4 10.2 71 2-89 1-72 (221)
243 3dty_A Oxidoreductase, GFO/IDH 97.8 3.7E-05 1.3E-09 73.7 8.2 72 2-89 13-96 (398)
244 1id1_A Putative potassium chan 97.8 6.3E-05 2.2E-09 61.9 8.5 40 2-43 4-44 (153)
245 2eez_A Alanine dehydrogenase; 97.8 1.8E-05 6.1E-10 75.2 5.7 101 2-129 167-268 (369)
246 4gqa_A NAD binding oxidoreduct 97.8 7.7E-05 2.6E-09 71.8 10.1 71 2-89 27-107 (412)
247 2nvw_A Galactose/lactose metab 97.8 0.00011 3.9E-09 72.1 11.3 72 2-88 40-118 (479)
248 3i23_A Oxidoreductase, GFO/IDH 97.8 5.1E-05 1.7E-09 71.4 8.4 70 2-89 3-76 (349)
249 5mdh_A Malate dehydrogenase; o 97.8 0.00012 4.2E-09 68.3 10.8 113 2-134 4-135 (333)
250 1up7_A 6-phospho-beta-glucosid 97.8 0.00013 4.5E-09 70.2 11.1 116 1-133 2-146 (417)
251 1hye_A L-lactate/malate dehydr 97.8 0.00039 1.3E-08 64.3 14.0 119 2-135 1-129 (313)
252 3btv_A Galactose/lactose metab 97.8 6.3E-05 2.2E-09 73.1 8.9 72 2-88 21-99 (438)
253 3o9z_A Lipopolysaccaride biosy 97.8 8.9E-05 3E-09 68.7 9.4 69 1-89 3-83 (312)
254 3h2s_A Putative NADH-flavin re 97.8 0.0004 1.4E-08 60.2 13.2 71 2-88 1-72 (224)
255 1dih_A Dihydrodipicolinate red 97.8 3.5E-05 1.2E-09 70.0 6.5 73 2-86 6-80 (273)
256 3oa2_A WBPB; oxidoreductase, s 97.7 9E-05 3.1E-09 68.8 9.3 69 1-89 3-84 (318)
257 3ius_A Uncharacterized conserv 97.7 8.7E-05 3E-09 67.2 8.7 69 1-88 5-73 (286)
258 1gpj_A Glutamyl-tRNA reductase 97.7 0.00016 5.4E-09 69.5 10.8 70 2-89 168-238 (404)
259 1x13_A NAD(P) transhydrogenase 97.7 5E-05 1.7E-09 72.9 6.9 41 2-44 173-213 (401)
260 3r6d_A NAD-dependent epimerase 97.7 9.3E-05 3.2E-09 64.5 7.6 75 1-87 4-82 (221)
261 3ijp_A DHPR, dihydrodipicolina 97.6 8.3E-05 2.8E-09 67.8 7.2 122 2-159 22-146 (288)
262 3oqb_A Oxidoreductase; structu 97.6 0.00015 5.3E-09 68.9 9.3 70 2-89 7-94 (383)
263 1b7g_O Protein (glyceraldehyde 97.6 8.4E-05 2.9E-09 69.7 7.2 85 1-89 1-88 (340)
264 2czc_A Glyceraldehyde-3-phosph 97.6 4.7E-05 1.6E-09 71.3 4.9 85 2-88 3-89 (334)
265 4fb5_A Probable oxidoreductase 97.6 0.00021 7.2E-09 67.7 9.4 70 3-89 27-105 (393)
266 4h3v_A Oxidoreductase domain p 97.6 0.00016 5.5E-09 68.5 8.5 69 3-89 8-86 (390)
267 3phh_A Shikimate dehydrogenase 97.5 0.00014 4.6E-09 65.8 7.1 96 2-133 119-214 (269)
268 1cf2_P Protein (glyceraldehyde 97.5 6.1E-05 2.1E-09 70.5 4.7 86 1-88 1-88 (337)
269 4ew6_A D-galactose-1-dehydroge 97.5 0.00024 8.3E-09 66.2 8.6 61 2-88 26-91 (330)
270 3eag_A UDP-N-acetylmuramate:L- 97.5 0.00081 2.8E-08 62.5 12.1 114 1-144 4-133 (326)
271 4g65_A TRK system potassium up 97.5 0.00016 5.5E-09 70.6 7.5 41 2-44 4-44 (461)
272 1l7d_A Nicotinamide nucleotide 97.5 0.00019 6.6E-09 68.4 7.8 41 2-44 173-213 (384)
273 1iuk_A Hypothetical protein TT 97.5 0.00014 4.9E-09 59.1 5.9 98 2-144 14-116 (140)
274 1y7t_A Malate dehydrogenase; N 97.5 0.00077 2.6E-08 62.7 11.6 74 2-90 5-92 (327)
275 1pjc_A Protein (L-alanine dehy 97.5 0.00023 7.7E-09 67.3 7.9 99 2-130 168-270 (361)
276 2aef_A Calcium-gated potassium 97.5 8.3E-05 2.8E-09 65.7 4.5 68 2-88 10-81 (234)
277 1nvm_B Acetaldehyde dehydrogen 97.5 0.00014 4.9E-09 67.3 6.1 70 2-88 5-81 (312)
278 3e8x_A Putative NAD-dependent 97.5 0.00033 1.1E-08 61.6 8.3 71 2-88 22-94 (236)
279 3dhn_A NAD-dependent epimerase 97.4 5.6E-05 1.9E-09 66.0 3.2 73 1-88 4-77 (227)
280 2d59_A Hypothetical protein PH 97.4 0.00039 1.3E-08 56.8 8.0 97 2-144 23-123 (144)
281 1ff9_A Saccharopine reductase; 97.4 0.00037 1.3E-08 67.8 9.2 75 2-88 4-78 (450)
282 3o8q_A Shikimate 5-dehydrogena 97.4 0.00018 6E-09 65.6 6.4 100 2-133 127-227 (281)
283 7mdh_A Protein (malate dehydro 97.4 0.00069 2.3E-08 64.0 10.6 113 2-134 33-164 (375)
284 2nu8_A Succinyl-COA ligase [AD 97.4 0.00036 1.2E-08 63.8 8.3 65 2-89 8-75 (288)
285 3qvo_A NMRA family protein; st 97.4 0.00016 5.4E-09 63.8 5.4 73 1-87 23-97 (236)
286 3dqp_A Oxidoreductase YLBE; al 97.4 0.00012 4.1E-09 63.7 4.5 104 2-127 1-106 (219)
287 3ulk_A Ketol-acid reductoisome 97.4 0.0011 3.6E-08 63.4 11.2 90 2-128 38-133 (491)
288 2axq_A Saccharopine dehydrogen 97.4 0.00039 1.3E-08 68.0 8.5 72 1-88 23-98 (467)
289 3dr3_A N-acetyl-gamma-glutamyl 97.3 0.00038 1.3E-08 65.0 7.4 34 1-35 4-38 (337)
290 3lk7_A UDP-N-acetylmuramoylala 97.3 0.0021 7.1E-08 62.5 13.0 113 2-144 10-137 (451)
291 3ond_A Adenosylhomocysteinase; 97.3 0.00038 1.3E-08 67.8 7.4 88 2-128 266-353 (488)
292 3ip3_A Oxidoreductase, putativ 97.3 0.00033 1.1E-08 65.5 6.6 72 1-88 2-77 (337)
293 2vt3_A REX, redox-sensing tran 97.3 0.00012 4E-09 64.0 3.1 67 2-88 86-155 (215)
294 1p77_A Shikimate 5-dehydrogena 97.3 0.00034 1.2E-08 63.4 6.1 71 2-89 120-191 (272)
295 3jyo_A Quinate/shikimate dehyd 97.2 0.0015 5E-08 59.6 9.7 75 2-89 128-205 (283)
296 1hdo_A Biliverdin IX beta redu 97.2 0.00054 1.9E-08 58.4 6.5 73 2-88 4-77 (206)
297 1nyt_A Shikimate 5-dehydrogena 97.2 0.00081 2.8E-08 60.9 7.8 100 2-133 120-220 (271)
298 1p9l_A Dihydrodipicolinate red 97.2 0.0028 9.6E-08 56.4 10.9 32 2-34 1-34 (245)
299 1lc0_A Biliverdin reductase A; 97.1 0.00081 2.8E-08 61.6 7.2 64 2-89 8-76 (294)
300 4ina_A Saccharopine dehydrogen 97.1 0.00084 2.9E-08 64.4 7.6 42 1-44 1-45 (405)
301 3mtj_A Homoserine dehydrogenas 97.1 0.0013 4.4E-08 63.6 8.7 66 3-88 12-88 (444)
302 1j5p_A Aspartate dehydrogenase 97.1 0.0011 3.8E-08 59.0 7.3 78 2-128 13-92 (253)
303 3pwz_A Shikimate dehydrogenase 97.1 0.0031 1E-07 57.1 10.3 99 2-133 121-221 (272)
304 3ngx_A Bifunctional protein fo 97.1 0.0022 7.7E-08 57.7 9.1 54 2-90 151-205 (276)
305 2yyy_A Glyceraldehyde-3-phosph 97.0 0.0012 4.2E-08 61.7 7.7 85 2-87 3-90 (343)
306 1u8f_O GAPDH, glyceraldehyde-3 97.0 0.004 1.4E-07 58.1 11.1 42 2-44 4-48 (335)
307 3m2p_A UDP-N-acetylglucosamine 97.0 0.0014 4.6E-08 60.1 7.3 70 1-88 2-72 (311)
308 1jw9_B Molybdopterin biosynthe 97.0 0.0012 4.1E-08 58.9 6.8 33 2-36 32-65 (249)
309 3e48_A Putative nucleoside-dip 97.0 0.00083 2.9E-08 60.8 5.7 74 2-88 1-75 (289)
310 3do5_A HOM, homoserine dehydro 96.9 0.0021 7.2E-08 59.7 8.3 117 1-143 2-132 (327)
311 1a4i_A Methylenetetrahydrofola 96.9 0.0043 1.5E-07 56.5 9.7 72 2-128 166-238 (301)
312 4a26_A Putative C-1-tetrahydro 96.8 0.0037 1.3E-07 56.9 8.7 71 2-127 166-239 (300)
313 4hv4_A UDP-N-acetylmuramate--L 96.8 0.0065 2.2E-07 59.8 11.2 112 2-144 23-147 (494)
314 1npy_A Hypothetical shikimate 96.8 0.002 6.9E-08 58.3 6.7 67 2-90 120-187 (271)
315 2dt5_A AT-rich DNA-binding pro 96.8 0.00031 1.1E-08 61.2 1.2 68 2-88 81-150 (211)
316 1oi7_A Succinyl-COA synthetase 96.8 0.0063 2.2E-07 55.5 10.0 104 2-144 8-114 (288)
317 4b4o_A Epimerase family protei 96.8 0.0039 1.3E-07 56.6 8.6 33 2-36 1-34 (298)
318 1b0a_A Protein (fold bifunctio 96.8 0.0048 1.6E-07 55.8 8.7 53 2-89 160-213 (288)
319 2jl1_A Triphenylmethane reduct 96.7 0.0014 4.7E-08 59.1 5.0 74 2-87 1-75 (287)
320 3fbt_A Chorismate mutase and s 96.7 0.003 1E-07 57.4 7.2 66 2-89 123-189 (282)
321 3p2o_A Bifunctional protein fo 96.7 0.0069 2.4E-07 54.8 9.4 53 2-89 161-214 (285)
322 1ys4_A Aspartate-semialdehyde 96.7 0.002 6.9E-08 60.6 6.0 32 2-34 9-41 (354)
323 3l07_A Bifunctional protein fo 96.7 0.0085 2.9E-07 54.2 9.7 53 2-89 162-215 (285)
324 2yv1_A Succinyl-COA ligase [AD 96.7 0.013 4.3E-07 53.6 11.0 104 2-144 14-120 (294)
325 4a5o_A Bifunctional protein fo 96.6 0.0093 3.2E-07 53.9 9.7 70 2-126 162-232 (286)
326 3gpi_A NAD-dependent epimerase 96.6 0.0008 2.7E-08 60.8 2.7 36 1-38 3-38 (286)
327 1y1p_A ARII, aldehyde reductas 96.6 0.0032 1.1E-07 58.0 6.9 40 2-43 12-52 (342)
328 1xq6_A Unknown protein; struct 96.6 0.0026 9E-08 55.8 5.8 74 1-87 4-78 (253)
329 3e5r_O PP38, glyceraldehyde-3- 96.6 0.0053 1.8E-07 57.2 8.1 40 2-42 4-46 (337)
330 4hb9_A Similarities with proba 96.6 0.0013 4.5E-08 62.2 4.0 33 2-36 2-34 (412)
331 1edz_A 5,10-methylenetetrahydr 96.6 0.00083 2.9E-08 62.0 2.4 73 2-89 178-256 (320)
332 2ozp_A N-acetyl-gamma-glutamyl 96.5 0.0026 9E-08 59.6 5.7 33 2-35 5-38 (345)
333 1qyc_A Phenylcoumaran benzylic 96.5 0.0019 6.5E-08 58.8 4.7 73 1-87 4-86 (308)
334 1qyd_A Pinoresinol-lariciresin 96.5 0.0025 8.5E-08 58.2 5.3 74 1-88 4-86 (313)
335 2gas_A Isoflavone reductase; N 96.5 0.0018 6.2E-08 58.9 4.3 74 1-88 2-86 (307)
336 3tnl_A Shikimate dehydrogenase 96.5 0.0089 3E-07 55.2 8.8 74 2-89 155-237 (315)
337 2ejw_A HDH, homoserine dehydro 96.4 0.0012 4.2E-08 61.4 2.9 65 2-88 4-76 (332)
338 2ep5_A 350AA long hypothetical 96.4 0.0036 1.2E-07 58.7 6.0 31 2-33 5-36 (350)
339 2b0j_A 5,10-methenyltetrahydro 96.4 0.076 2.6E-06 47.5 13.8 113 65-206 128-241 (358)
340 2x4g_A Nucleoside-diphosphate- 96.4 0.0012 4.1E-08 61.1 2.4 73 1-87 13-86 (342)
341 3oh8_A Nucleoside-diphosphate 96.4 0.0035 1.2E-07 61.9 5.9 36 1-38 147-183 (516)
342 2yv2_A Succinyl-COA synthetase 96.3 0.019 6.5E-07 52.5 10.2 104 2-144 14-121 (297)
343 3dfz_A SIRC, precorrin-2 dehyd 96.3 0.03 1E-06 48.9 11.0 66 2-88 32-101 (223)
344 2r00_A Aspartate-semialdehyde 96.3 0.0021 7.1E-08 60.0 3.7 33 1-33 3-37 (336)
345 3c1o_A Eugenol synthase; pheny 96.3 0.0027 9.3E-08 58.2 4.5 73 1-87 4-86 (321)
346 1nvt_A Shikimate 5'-dehydrogen 96.3 0.0048 1.7E-07 56.1 6.0 108 2-133 129-236 (287)
347 1lnq_A MTHK channels, potassiu 96.3 0.0028 9.7E-08 58.9 4.5 68 2-87 116-186 (336)
348 4dpl_A Malonyl-COA/succinyl-CO 96.3 0.0022 7.6E-08 60.4 3.6 32 2-34 8-40 (359)
349 4dpk_A Malonyl-COA/succinyl-CO 96.3 0.0022 7.6E-08 60.4 3.6 32 2-34 8-40 (359)
350 1vkn_A N-acetyl-gamma-glutamyl 96.2 0.0089 3E-07 55.9 7.5 94 1-128 13-108 (351)
351 1xyg_A Putative N-acetyl-gamma 96.2 0.0046 1.6E-07 58.2 5.4 33 2-35 17-50 (359)
352 2zcu_A Uncharacterized oxidore 96.2 0.0045 1.5E-07 55.6 5.0 74 3-88 1-75 (286)
353 3hn7_A UDP-N-acetylmuramate-L- 96.2 0.058 2E-06 53.3 13.3 113 2-144 20-147 (524)
354 3i6i_A Putative leucoanthocyan 96.2 0.0029 1E-07 58.8 3.7 72 2-87 11-92 (346)
355 3st7_A Capsular polysaccharide 96.1 0.025 8.4E-07 52.9 10.1 32 2-35 1-34 (369)
356 3keo_A Redox-sensing transcrip 96.1 0.0014 4.8E-08 56.9 1.3 69 2-88 85-158 (212)
357 2c2x_A Methylenetetrahydrofola 96.1 0.021 7.3E-07 51.4 8.9 55 2-89 159-214 (281)
358 2r6j_A Eugenol synthase 1; phe 96.0 0.0061 2.1E-07 55.8 5.2 71 3-87 13-88 (318)
359 2fp4_A Succinyl-COA ligase [GD 96.0 0.046 1.6E-06 50.1 10.8 103 3-144 15-121 (305)
360 3cmc_O GAPDH, glyceraldehyde-3 96.0 0.0087 3E-07 55.6 6.0 42 1-43 1-44 (334)
361 2nqt_A N-acetyl-gamma-glutamyl 96.0 0.0069 2.4E-07 56.8 5.3 31 1-33 9-46 (352)
362 1orr_A CDP-tyvelose-2-epimeras 96.0 0.027 9.1E-07 51.9 9.3 33 1-35 1-34 (347)
363 3fpf_A Mtnas, putative unchara 96.0 0.088 3E-06 48.0 12.4 97 2-127 124-222 (298)
364 1c1d_A L-phenylalanine dehydro 96.0 0.022 7.4E-07 53.4 8.6 35 2-38 176-210 (355)
365 3t4e_A Quinate/shikimate dehyd 95.9 0.028 9.7E-07 51.7 9.2 74 2-89 149-231 (312)
366 3kkj_A Amine oxidase, flavin-c 95.9 0.0057 1.9E-07 53.1 4.4 32 3-36 4-35 (336)
367 2wm3_A NMRA-like family domain 95.9 0.0079 2.7E-07 54.5 5.2 72 2-87 6-81 (299)
368 3cps_A Glyceraldehyde 3-phosph 95.9 0.011 3.7E-07 55.3 6.1 32 1-33 17-48 (354)
369 3h2z_A Mannitol-1-phosphate 5- 95.9 0.012 4.3E-07 55.6 6.6 82 2-87 1-88 (382)
370 3c8m_A Homoserine dehydrogenas 95.9 0.0058 2E-07 56.9 4.2 79 2-89 7-97 (331)
371 3ko8_A NAD-dependent epimerase 95.8 0.023 7.8E-07 51.6 7.9 35 2-38 1-36 (312)
372 1p3d_A UDP-N-acetylmuramate--a 95.7 0.078 2.7E-06 51.7 12.0 119 2-144 19-143 (475)
373 2c5a_A GDP-mannose-3', 5'-epim 95.7 0.0041 1.4E-07 58.7 2.7 36 1-38 29-65 (379)
374 2f00_A UDP-N-acetylmuramate--L 95.7 0.099 3.4E-06 51.1 12.7 115 2-144 20-144 (491)
375 1xgk_A Nitrogen metabolite rep 95.7 0.082 2.8E-06 49.3 11.6 36 2-39 6-42 (352)
376 3ruf_A WBGU; rossmann fold, UD 95.7 0.0087 3E-07 55.5 4.9 40 2-43 26-70 (351)
377 1vl6_A Malate oxidoreductase; 95.7 0.014 4.9E-07 54.9 6.2 94 2-128 193-295 (388)
378 3hm2_A Precorrin-6Y C5,15-meth 95.7 0.14 4.7E-06 42.0 11.8 113 2-144 27-143 (178)
379 4id9_A Short-chain dehydrogena 95.7 0.017 5.9E-07 53.3 6.8 66 2-87 20-86 (347)
380 2ywl_A Thioredoxin reductase r 95.7 0.0092 3.1E-07 49.7 4.4 34 1-36 1-34 (180)
381 3pwk_A Aspartate-semialdehyde 95.7 0.0095 3.2E-07 56.1 4.8 30 2-33 3-36 (366)
382 1gad_O D-glyceraldehyde-3-phos 95.6 0.024 8.2E-07 52.6 7.4 41 1-42 1-43 (330)
383 2bka_A CC3, TAT-interacting pr 95.6 0.0059 2E-07 53.4 3.1 73 2-88 19-94 (242)
384 3ing_A Homoserine dehydrogenas 95.6 0.019 6.6E-07 53.2 6.6 35 2-36 5-45 (325)
385 4gx0_A TRKA domain protein; me 95.6 0.018 6.1E-07 57.5 6.8 39 2-42 349-387 (565)
386 1hdg_O Holo-D-glyceraldehyde-3 95.6 0.027 9.1E-07 52.3 7.4 42 2-43 1-45 (332)
387 3qj4_A Renalase; FAD/NAD(P)-bi 95.6 0.0085 2.9E-07 55.5 4.1 34 1-36 1-37 (342)
388 2x5j_O E4PDH, D-erythrose-4-ph 95.5 0.081 2.8E-06 49.2 10.5 41 2-43 3-48 (339)
389 4dgk_A Phytoene dehydrogenase; 95.5 0.0085 2.9E-07 58.5 4.0 34 1-36 1-34 (501)
390 3slg_A PBGP3 protein; structur 95.5 0.0041 1.4E-07 58.3 1.6 41 1-42 24-65 (372)
391 3e05_A Precorrin-6Y C5,15-meth 95.5 0.29 9.9E-06 41.3 13.3 113 2-144 42-158 (204)
392 1zud_1 Adenylyltransferase THI 95.4 0.03 1E-06 49.8 7.1 40 2-43 29-69 (251)
393 3hsk_A Aspartate-semialdehyde 95.4 0.011 3.9E-07 55.9 4.4 30 2-32 20-50 (381)
394 2x5o_A UDP-N-acetylmuramoylala 95.4 0.031 1E-06 54.0 7.5 113 2-144 6-129 (439)
395 2rh8_A Anthocyanidin reductase 95.4 0.11 3.9E-06 47.5 11.1 34 2-37 10-44 (338)
396 1sb8_A WBPP; epimerase, 4-epim 95.2 0.013 4.5E-07 54.3 4.3 34 1-36 27-61 (352)
397 1t4b_A Aspartate-semialdehyde 95.2 0.011 3.7E-07 55.9 3.6 69 1-87 1-74 (367)
398 3g3e_A D-amino-acid oxidase; F 95.2 0.013 4.6E-07 54.3 4.3 35 2-36 1-39 (351)
399 3o38_A Short chain dehydrogena 95.2 0.14 4.7E-06 45.4 10.9 39 3-43 24-64 (266)
400 2ydy_A Methionine adenosyltran 95.2 0.056 1.9E-06 49.1 8.4 35 2-38 3-38 (315)
401 3tz6_A Aspartate-semialdehyde 95.2 0.012 4.1E-07 54.9 3.8 32 2-33 2-35 (344)
402 3ged_A Short-chain dehydrogena 95.2 0.21 7.1E-06 44.2 11.7 42 1-44 1-44 (247)
403 1oc2_A DTDP-glucose 4,6-dehydr 95.1 0.0082 2.8E-07 55.5 2.5 36 1-36 4-40 (348)
404 2bll_A Protein YFBG; decarboxy 95.1 0.023 7.8E-07 52.3 5.5 39 2-41 1-40 (345)
405 3rp8_A Flavoprotein monooxygen 95.1 0.021 7.1E-07 54.2 5.2 33 2-36 24-56 (407)
406 2d2i_A Glyceraldehyde 3-phosph 95.1 0.071 2.4E-06 50.2 8.7 42 2-43 3-47 (380)
407 3b1j_A Glyceraldehyde 3-phosph 95.1 0.035 1.2E-06 51.7 6.5 42 2-43 3-47 (339)
408 3nrn_A Uncharacterized protein 95.0 0.02 6.8E-07 54.6 5.0 33 2-36 1-33 (421)
409 3c4a_A Probable tryptophan hyd 95.0 0.016 5.5E-07 54.6 4.3 36 2-37 1-36 (381)
410 1pl8_A Human sorbitol dehydrog 95.0 0.29 9.8E-06 45.5 12.8 40 3-44 174-214 (356)
411 1e3j_A NADP(H)-dependent ketos 95.0 0.2 6.8E-06 46.5 11.7 40 3-44 171-210 (352)
412 1yvv_A Amine oxidase, flavin-c 95.0 0.02 6.8E-07 52.5 4.6 33 2-36 3-35 (336)
413 3tum_A Shikimate dehydrogenase 95.0 0.16 5.6E-06 45.5 10.5 72 2-89 126-198 (269)
414 4fn4_A Short chain dehydrogena 94.9 0.27 9.1E-06 43.7 11.8 40 3-44 8-49 (254)
415 3njr_A Precorrin-6Y methylase; 94.9 0.38 1.3E-05 40.9 12.4 110 2-144 57-170 (204)
416 3oz2_A Digeranylgeranylglycero 94.9 0.015 5.2E-07 54.3 3.7 31 4-36 7-37 (397)
417 1y56_B Sarcosine oxidase; dehy 94.9 0.02 6.7E-07 53.7 4.5 31 3-35 7-37 (382)
418 3uko_A Alcohol dehydrogenase c 94.9 0.14 4.7E-06 48.2 10.4 40 3-44 196-236 (378)
419 1ebf_A Homoserine dehydrogenas 94.9 0.019 6.5E-07 54.0 4.2 33 2-34 5-40 (358)
420 1c0p_A D-amino acid oxidase; a 94.8 0.028 9.7E-07 52.3 5.3 31 3-35 8-38 (363)
421 3ip1_A Alcohol dehydrogenase, 94.8 0.15 5.1E-06 48.5 10.4 40 3-44 216-256 (404)
422 3s2e_A Zinc-containing alcohol 94.8 0.11 3.9E-06 47.9 9.4 40 3-44 169-208 (340)
423 4f6c_A AUSA reductase domain p 94.8 0.057 1.9E-06 51.6 7.4 34 2-37 70-104 (427)
424 1rm4_O Glyceraldehyde 3-phosph 94.7 0.055 1.9E-06 50.2 6.9 43 1-43 1-46 (337)
425 3two_A Mannitol dehydrogenase; 94.7 0.056 1.9E-06 50.2 7.1 68 2-89 178-245 (348)
426 3ka7_A Oxidoreductase; structu 94.7 0.025 8.5E-07 53.8 4.7 33 2-36 1-33 (425)
427 3h8l_A NADH oxidase; membrane 94.7 0.028 9.4E-07 53.4 5.0 35 1-37 1-38 (409)
428 3ehe_A UDP-glucose 4-epimerase 94.6 0.022 7.6E-07 51.8 4.0 73 1-89 1-74 (313)
429 2d8a_A PH0655, probable L-thre 94.6 0.091 3.1E-06 48.8 8.3 40 3-44 170-210 (348)
430 1kyq_A Met8P, siroheme biosynt 94.6 0.039 1.3E-06 49.7 5.3 33 2-36 14-46 (274)
431 4gx0_A TRKA domain protein; me 94.6 0.049 1.7E-06 54.3 6.5 42 2-45 128-169 (565)
432 1e3i_A Alcohol dehydrogenase, 94.5 0.16 5.6E-06 47.6 9.9 40 3-44 198-238 (376)
433 1rjw_A ADH-HT, alcohol dehydro 94.5 0.19 6.6E-06 46.4 10.2 41 2-44 166-206 (339)
434 1geg_A Acetoin reductase; SDR 94.5 0.45 1.6E-05 41.7 12.2 39 3-43 4-43 (256)
435 3aoe_E Glutamate dehydrogenase 94.5 1.1 3.6E-05 42.8 15.3 41 2-44 219-270 (419)
436 1p0f_A NADP-dependent alcohol 94.5 0.15 5.3E-06 47.7 9.5 40 3-44 194-234 (373)
437 3l77_A Short-chain alcohol deh 94.4 0.19 6.3E-06 43.6 9.4 40 2-43 3-43 (235)
438 2gf3_A MSOX, monomeric sarcosi 94.4 0.031 1.1E-06 52.3 4.6 32 2-35 4-35 (389)
439 2tmg_A Protein (glutamate dehy 94.4 1.6 5.4E-05 41.5 16.3 72 2-87 210-294 (415)
440 2hjs_A USG-1 protein homolog; 94.4 0.017 5.9E-07 53.9 2.6 32 2-33 7-40 (340)
441 3tfo_A Putative 3-oxoacyl-(acy 94.4 0.42 1.4E-05 42.5 11.7 39 3-43 6-45 (264)
442 1iy8_A Levodione reductase; ox 94.4 0.78 2.7E-05 40.5 13.5 39 3-43 15-54 (267)
443 3ff4_A Uncharacterized protein 94.3 0.073 2.5E-06 41.8 5.8 95 2-144 5-104 (122)
444 2yvl_A TRMI protein, hypotheti 94.3 0.28 9.7E-06 42.6 10.4 93 2-126 93-189 (248)
445 3dme_A Conserved exported prot 94.3 0.035 1.2E-06 51.3 4.6 32 3-36 6-37 (369)
446 3ihm_A Styrene monooxygenase A 94.3 0.034 1.2E-06 53.4 4.6 33 2-36 23-55 (430)
447 2vou_A 2,6-dihydroxypyridine h 94.3 0.033 1.1E-06 52.7 4.4 33 2-36 6-38 (397)
448 3h5n_A MCCB protein; ubiquitin 94.3 0.15 5.1E-06 47.7 8.8 42 2-45 119-161 (353)
449 3qiv_A Short-chain dehydrogena 94.3 0.51 1.7E-05 41.2 12.0 40 3-44 11-51 (253)
450 3h8v_A Ubiquitin-like modifier 94.3 0.077 2.6E-06 48.2 6.6 41 2-44 37-78 (292)
451 3rui_A Ubiquitin-like modifier 94.2 0.097 3.3E-06 48.6 7.3 41 2-44 35-76 (340)
452 2uzz_A N-methyl-L-tryptophan o 94.2 0.031 1E-06 52.1 4.0 33 2-36 3-35 (372)
453 3l6e_A Oxidoreductase, short-c 94.2 0.96 3.3E-05 39.2 13.6 39 3-43 5-44 (235)
454 4g81_D Putative hexonate dehyd 94.2 0.32 1.1E-05 43.2 10.5 39 3-43 10-50 (255)
455 3m6i_A L-arabinitol 4-dehydrog 94.2 0.36 1.2E-05 44.9 11.4 40 3-44 182-222 (363)
456 4ej6_A Putative zinc-binding d 94.2 0.22 7.7E-06 46.6 10.0 40 3-44 185-225 (370)
457 3pk0_A Short-chain dehydrogena 94.2 0.4 1.4E-05 42.4 11.2 39 3-43 12-51 (262)
458 3lf2_A Short chain oxidoreduct 94.2 0.41 1.4E-05 42.4 11.3 39 3-43 10-49 (265)
459 1ryi_A Glycine oxidase; flavop 94.2 0.038 1.3E-06 51.6 4.6 32 2-35 18-49 (382)
460 2c20_A UDP-glucose 4-epimerase 94.2 0.049 1.7E-06 49.8 5.2 34 1-36 1-35 (330)
461 4b4u_A Bifunctional protein fo 94.2 0.23 7.8E-06 45.1 9.4 70 2-126 180-250 (303)
462 2oln_A NIKD protein; flavoprot 94.2 0.042 1.4E-06 51.8 4.9 32 3-36 6-37 (397)
463 2jhf_A Alcohol dehydrogenase E 94.1 0.21 7.3E-06 46.7 9.7 40 3-44 194-234 (374)
464 3jv7_A ADH-A; dehydrogenase, n 94.1 0.19 6.4E-06 46.5 9.2 41 3-44 174-214 (345)
465 3ntd_A FAD-dependent pyridine 94.1 0.044 1.5E-06 54.4 5.1 37 1-37 1-37 (565)
466 3nks_A Protoporphyrinogen oxid 94.1 0.039 1.3E-06 53.3 4.6 34 1-36 2-37 (477)
467 3alj_A 2-methyl-3-hydroxypyrid 94.1 0.039 1.3E-06 51.8 4.4 33 2-36 12-44 (379)
468 3fbs_A Oxidoreductase; structu 94.1 0.052 1.8E-06 48.5 5.0 33 2-36 3-35 (297)
469 3iwa_A FAD-dependent pyridine 94.0 0.047 1.6E-06 53.0 5.0 36 2-37 4-39 (472)
470 3lyl_A 3-oxoacyl-(acyl-carrier 94.0 1.2 4.1E-05 38.6 13.9 39 3-43 7-46 (247)
471 1cdo_A Alcohol dehydrogenase; 94.0 0.26 8.8E-06 46.2 10.0 40 3-44 195-235 (374)
472 2xdo_A TETX2 protein; tetracyc 94.0 0.048 1.6E-06 51.6 4.9 33 3-37 28-60 (398)
473 3ucx_A Short chain dehydrogena 94.0 0.74 2.5E-05 40.6 12.5 40 3-44 13-53 (264)
474 3pzr_A Aspartate-semialdehyde 94.0 0.19 6.3E-06 47.3 8.8 70 2-87 1-73 (370)
475 3oc4_A Oxidoreductase, pyridin 94.0 0.041 1.4E-06 53.1 4.4 35 2-36 3-37 (452)
476 3gaf_A 7-alpha-hydroxysteroid 94.0 0.53 1.8E-05 41.4 11.5 39 3-43 14-53 (256)
477 3rkr_A Short chain oxidoreduct 93.9 0.52 1.8E-05 41.5 11.4 39 3-43 31-70 (262)
478 1hdc_A 3-alpha, 20 beta-hydrox 93.9 0.55 1.9E-05 41.2 11.5 41 2-44 6-47 (254)
479 2fzw_A Alcohol dehydrogenase c 93.9 0.41 1.4E-05 44.7 11.2 40 3-44 193-233 (373)
480 3k7m_X 6-hydroxy-L-nicotine ox 93.9 0.045 1.5E-06 52.1 4.5 33 1-35 1-33 (431)
481 3rft_A Uronate dehydrogenase; 93.9 0.028 9.7E-07 50.1 2.9 34 2-37 4-38 (267)
482 3uog_A Alcohol dehydrogenase; 93.8 0.13 4.4E-06 48.1 7.5 41 2-44 191-231 (363)
483 1xu9_A Corticosteroid 11-beta- 93.8 0.44 1.5E-05 42.6 10.9 40 2-43 29-69 (286)
484 4g65_A TRK system potassium up 93.8 0.43 1.5E-05 46.2 11.4 41 2-45 236-276 (461)
485 3vps_A TUNA, NAD-dependent epi 93.8 0.057 1.9E-06 48.9 4.9 34 2-37 8-42 (321)
486 3i1j_A Oxidoreductase, short c 93.8 0.46 1.6E-05 41.3 10.7 40 3-44 16-56 (247)
487 3awd_A GOX2181, putative polyo 93.8 0.81 2.8E-05 39.9 12.4 38 3-42 15-53 (260)
488 2pt6_A Spermidine synthase; tr 93.8 0.41 1.4E-05 44.0 10.7 110 2-129 118-232 (321)
489 2bi7_A UDP-galactopyranose mut 93.8 0.056 1.9E-06 51.1 4.9 33 2-36 4-36 (384)
490 3dii_A Short-chain dehydrogena 93.8 0.1 3.5E-06 45.9 6.3 40 3-44 4-44 (247)
491 1f8f_A Benzyl alcohol dehydrog 93.7 0.27 9.1E-06 46.0 9.5 40 3-44 193-233 (371)
492 1cyd_A Carbonyl reductase; sho 93.7 0.11 3.7E-06 45.2 6.4 41 2-44 8-49 (244)
493 1fmc_A 7 alpha-hydroxysteroid 93.7 0.55 1.9E-05 40.9 11.0 40 2-43 12-52 (255)
494 1vj0_A Alcohol dehydrogenase, 93.7 0.38 1.3E-05 45.2 10.6 40 3-44 198-238 (380)
495 3nix_A Flavoprotein/dehydrogen 93.7 0.048 1.6E-06 51.7 4.3 33 2-36 6-38 (421)
496 2pnf_A 3-oxoacyl-[acyl-carrier 93.7 0.56 1.9E-05 40.6 11.0 39 3-43 9-48 (248)
497 1k0i_A P-hydroxybenzoate hydro 93.7 0.041 1.4E-06 51.8 3.7 34 2-37 3-36 (394)
498 3guy_A Short-chain dehydrogena 93.6 0.094 3.2E-06 45.4 5.8 42 1-44 1-43 (230)
499 2jah_A Clavulanic acid dehydro 93.6 0.86 2.9E-05 39.7 12.2 39 3-43 9-48 (247)
500 3fpc_A NADP-dependent alcohol 93.6 0.17 5.8E-06 47.0 7.9 40 3-44 169-209 (352)
No 1
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=100.00 E-value=9.1e-85 Score=631.19 Aligned_cols=342 Identities=35% Similarity=0.558 Sum_probs=320.3
Q ss_pred CceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhh-hcCCCEEEecCHHhhhcCC
Q 017997 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQ-CRGKNLFFSTDVEKHVSEA 79 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~-~~~~~l~~t~d~~~a~~~a 79 (362)
|.+|+|||+||||+++|.+|++. ||+|+|+|+|+++++.|++|+.|++||++++++++ ...+++++|+|++++++++
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~--G~~V~g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~g~l~~tt~~~~ai~~a 98 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALL--GHRVVGYDVNPSIVERLRAGRPHIYEPGLEEALGRALSSGRLSFAESAEEAVAAT 98 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH--TCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEECSSHHHHHHTS
T ss_pred CCEEEEEccCHHHHHHHHHHHhC--CCcEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHcCCeeEEcCHHHHHhcC
Confidence 56899999999999999999999 99999999999999999999999999999999876 5678999999999999999
Q ss_pred cEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcC---CCCEEEEeeCCccccHHHH-HHHHHhccCCCceEEeeC
Q 017997 80 DIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSK---SDKIVVEKSTVPVKTAEAI-EKILTHNSKGIKFQILSN 155 (362)
Q Consensus 80 DvVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~---~~~iVv~~STv~~gt~~~l-~~~l~~~~~g~~~~v~~~ 155 (362)
|++|||||||.+.++ .+|+++++++.+.|+++++ ++++||++||+||||++++ .+.+++.+.+.+|+++|+
T Consensus 99 d~~~I~VpTP~~~d~-----~~Dl~~v~~a~~~I~~~l~~~~~g~lVV~eSTVppGtte~~~~~~l~~~~~~~~f~v~~~ 173 (444)
T 3vtf_A 99 DATFIAVGTPPAPDG-----SADLRYVEAAARAVGRGIRAKGRWHLVVVKSTVPPGTTEGLVARAVAEEAGGVKFSVASN 173 (444)
T ss_dssp SEEEECCCCCBCTTS-----SBCCHHHHHHHHHHHHHHHHHCSCCEEEECSCCCTTTTTTHHHHHHHTTTTTCCCEEEEC
T ss_pred CceEEEecCCCCCCC-----CCCcHHHHHHHHHHHHHHhhcCCCeEEEEeCCCCCchHHHHHHHHHHHhCCCCCceeecC
Confidence 999999999998865 9999999999999999885 5789999999999999875 566766655789999999
Q ss_pred CcccccCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCcEEeCChhHHHHHHHHHhHHHHHHHHHHHHHHH
Q 017997 156 PEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRISSVNAMSA 235 (362)
Q Consensus 156 Pe~~~~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~ 235 (362)
|||+.||++++++.+|+|||+|+.+ +++.+.++++|+.+. .++.++++++||++||++|+||+++|||+||++.
T Consensus 174 PErl~eG~a~~d~~~~~riViG~~~----~~a~~~~~~ly~~~~--~~~~~~~~~~AE~~Kl~eN~~ravnIa~~NEla~ 247 (444)
T 3vtf_A 174 PEFLREGSALEDFFKPDRIVIGAGD----ERAASFLLDVYKAVD--APKLVMKPREAELVKYASNVFLALKISFANEVGL 247 (444)
T ss_dssp CCCCCTTSHHHHHHSCSCEEEEESS----HHHHHHHHHHTTTSC--SCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccCCccccccccCCcEEEcCCC----HHHHHHHHHHHhccC--CCEEEechhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999873 788899999999875 4677899999999999999999999999999999
Q ss_pred HHHHhCCCHHHHHHHhcCCCCCCCCCccCCCCCcccChhHhHHHHHHHHHhCCCchhHHHHHHHHHHHHHhHHHHHHHHH
Q 017997 236 LCEATGANVSQVAFAVGTDSRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIKINDYQKSRFVNRVV 315 (362)
Q Consensus 236 l~~~~g~d~~~v~~~~~~~~~i~~~~~~~g~g~gg~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~~~N~~~~~~~~~~~~ 315 (362)
+|+++|+|+++|++++++|+|+|++|++||+||||||||||+++|.+.|++.|++ .+++++++++|+.||+++++++.
T Consensus 248 ice~~GiDv~eV~~a~~~d~rig~~~l~PG~G~GG~CipkD~~~L~~~a~~~g~~--~~li~a~~~iN~~~~~~vv~~l~ 325 (444)
T 3vtf_A 248 LAKRLGVDTYRVFEAVGLDKRIGRHYFGAGLGFGGSCFPKDTLAFIRFGESLGLE--MAISKAVLRVNEYMPRYAVQLLE 325 (444)
T ss_dssp HHHHTTCCHHHHHHHHHTSTTSCSTTCCCSSCCCTTTHHHHHHHHHHHHHHTTCC--CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCCHHHHHHHhccCCCCCCCCCCCCCCCCCcccCcCHHHHHHHHHhcCCC--HHHHHhhHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999 89999999999999999999987
Q ss_pred HHhcCCCCCCEEEEEeeecCCCCCCCCCChhHHHHHHHHhccC
Q 017997 316 ASMFNTVSNKKIAVLGFAFKKDTGDTRETPAIDSHHGEASERG 358 (362)
Q Consensus 316 ~~~~~~~~~~~v~vlG~~~k~~~~d~r~s~~~~~~~~L~~~~~ 358 (362)
+.+ +.++++||+|||+||||||+|+||||++.|++.|.++|.
T Consensus 326 ~~~-~~l~g~~V~vlGlafK~~tdD~ReSpa~~ii~~L~~~Ga 367 (444)
T 3vtf_A 326 ERL-GGLRGRHVGVLGLAFKPNTDDVRESRGVEVARLLLERGA 367 (444)
T ss_dssp HHH-TCCTTCEEEEECCSSSSSCCCCTTCHHHHHHHHHHHTTC
T ss_pred HHc-cccCCCEEEEEeeecCCCCCccccCcHHHHHHHHHHCCC
Confidence 765 678999999999999999999999999999999999985
No 2
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=100.00 E-value=9.6e-78 Score=587.23 Aligned_cols=344 Identities=38% Similarity=0.623 Sum_probs=318.3
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhh-hcCCCEEEecCHHhhhcCCc
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQ-CRGKNLFFSTDVEKHVSEAD 80 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~-~~~~~l~~t~d~~~a~~~aD 80 (362)
.+|+|||+||||+++|.+|+++ ||+|++||+++++++.++++..|++||++++++++ ...+++++|+|+++++++||
T Consensus 9 ~~~~vIGlG~vG~~~A~~La~~--G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~~aD 86 (446)
T 4a7p_A 9 VRIAMIGTGYVGLVSGACFSDF--GHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAEGVKDAD 86 (446)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHTTCS
T ss_pred eEEEEEcCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHHHHhcCC
Confidence 4799999999999999999999 99999999999999999999999999999998765 34678999999998899999
Q ss_pred EEEEeccCCCCC-CCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhccCCCceEEeeCCccc
Q 017997 81 IVFVSVNTPTKT-QGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEFL 159 (362)
Q Consensus 81 vVii~vptp~~~-~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~~ 159 (362)
+||+|||||.+. ++ .+|++++++++++|.++++++++||++||++|||++++.+.+++...+.+|.++++|||+
T Consensus 87 vvii~Vptp~~~~~~-----~~Dl~~v~~v~~~i~~~l~~g~iVV~~STv~pgtt~~l~~~l~e~~~~~d~~v~~~Pe~a 161 (446)
T 4a7p_A 87 AVFIAVGTPSRRGDG-----HADLSYVFAAAREIAENLTKPSVIVTKSTVPVGTGDEVERIIAEVAPNSGAKVVSNPEFL 161 (446)
T ss_dssp EEEECCCCCBCTTTC-----CBCTHHHHHHHHHHHHSCCSCCEEEECSCCCTTHHHHHHHHHHHHSTTSCCEEEECCCCC
T ss_pred EEEEEcCCCCccccC-----CccHHHHHHHHHHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHHhCCCCCceEEeCcccc
Confidence 999999999864 44 899999999999999999999999999999999999998888776444678999999999
Q ss_pred ccCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCC--cEEeCChhHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 017997 160 AEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPED--RILTTNLWSAELSKLAANAFLAQRISSVNAMSALC 237 (362)
Q Consensus 160 ~~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~ 237 (362)
.||.+++++.+|++|++|+.+ +++.++++++|+.++... +++.+++++||++|+++|++++++++++||++.+|
T Consensus 162 ~eG~a~~d~~~p~~ivvG~~~----~~~~~~~~~ly~~~~~~~~~~~~~~d~~~aE~~Kl~~N~~~a~~ia~~nE~~~l~ 237 (446)
T 4a7p_A 162 REGAAIEDFKRPDRVVVGTED----EFARQVMREIYRPLSLNQSAPVLFTGRRTSELIKYAANAFLAVKITFINEIADLC 237 (446)
T ss_dssp CTTSHHHHHHSCSCEEEECSC----HHHHHHHHHHHCSCC-----CEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccchhhhccCCCEEEEeCCc----HHHHHHHHHHHHHHhcCCCeEEEeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999863 788999999999986422 57789999999999999999999999999999999
Q ss_pred HHhCCCHHHHHHHhcCCCCCCCCCccCCCCCcccChhHhHHHHHHHHHhCCCchhHHHHHHHHHHHHHhHHHHHHHHHHH
Q 017997 238 EATGANVSQVAFAVGTDSRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIKINDYQKSRFVNRVVAS 317 (362)
Q Consensus 238 ~~~g~d~~~v~~~~~~~~~i~~~~~~~g~g~gg~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~~~N~~~~~~~~~~~~~~ 317 (362)
+++|+|+++|+++++++||+|+++++||+||||+|+|||+++|++.|++.|++ .+++++++++|++||+++++++.+.
T Consensus 238 ~~~GiD~~~v~~~~~~~~rig~~~l~pg~G~gg~c~~KD~~~l~~~A~~~g~~--~~l~~~~~~iN~~~~~~~~~~i~~~ 315 (446)
T 4a7p_A 238 EQVGADVQEVSRGIGMDNRIGGKFLHAGPGYGGSCFPKDTLALMKTAADNETP--LRIVEATVQVNDARKRAMGRKVIKA 315 (446)
T ss_dssp HHTTCCHHHHHHHHHTSTTC---CCCCCSCCCTTTHHHHHHHHHHHHHHTTCC--CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHcCCCHHHHHHHHhcCCCCCCccCCCCCCcchhhHHHHHHHHHHHHHhcCCC--CHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred hcCCCCCCEEEEEeeecCCCCCCCCCChhHHHHHHHHhccC
Q 017997 318 MFNTVSNKKIAVLGFAFKKDTGDTRETPAIDSHHGEASERG 358 (362)
Q Consensus 318 ~~~~~~~~~v~vlG~~~k~~~~d~r~s~~~~~~~~L~~~~~ 358 (362)
+++.++++||+|||+||||||||+||||++.|++.|+++|.
T Consensus 316 l~~~~~~~~v~vlGlafK~~~dD~ReSp~~~i~~~L~~~g~ 356 (446)
T 4a7p_A 316 MGGDVRGKTVGILGLTFKPNTDDMRDAPSLSIIAALQDAGA 356 (446)
T ss_dssp TTSCCTTCEEEEECCSSSTTSCCCTTCSHHHHHHHHHHTSC
T ss_pred hcccCCCCEEEEEEEEeCCCCcccccChHHHHHHHHHHCCC
Confidence 98889999999999999999999999999999999999874
No 3
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=100.00 E-value=4.8e-76 Score=571.34 Aligned_cols=334 Identities=25% Similarity=0.387 Sum_probs=296.3
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhh-hcCCCEEEecCHHhhhcCCc
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQ-CRGKNLFFSTDVEKHVSEAD 80 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~-~~~~~l~~t~d~~~a~~~aD 80 (362)
.|..|||+||||+++|.+|+++ ||+|++||+|+++++.|++++.|++||++++++++ ...+++++|+|+ ++||
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~--G~~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~~g~l~~ttd~----~~aD 85 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKH--GVDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVSTTP----EASD 85 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESSC----CCCS
T ss_pred CccEEEeeCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhcccCceEEeCch----hhCC
Confidence 3789999999999999999999 99999999999999999999999999999998765 346889999984 5799
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHH-HHhccC--CCceEEeeCCc
Q 017997 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKI-LTHNSK--GIKFQILSNPE 157 (362)
Q Consensus 81 vVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~-l~~~~~--g~~~~v~~~Pe 157 (362)
+||+|||||.+.+. .+.+|+++++++.++|.++++++++||++||++|||++++.+. +++.+. +.+|.++++||
T Consensus 86 vvii~VpTp~~~~~---~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~STV~pgtt~~v~~~i~e~~g~~~~~d~~v~~~Pe 162 (431)
T 3ojo_A 86 VFIIAVPTPNNDDQ---YRSCDISLVMRALDSILPFLKKGNTIIVESTIAPKTMDDFVKPVIENLGFTIGEDIYLVHCPE 162 (431)
T ss_dssp EEEECCCCCBCSSS---SCBBCCHHHHHHHHHHGGGCCTTEEEEECSCCCTTHHHHTHHHHHHTTTCCBTTTEEEEECCC
T ss_pred EEEEEeCCCccccc---cCCccHHHHHHHHHHHHHhCCCCCEEEEecCCChhHHHHHHHHHHHHcCCCcCCCeEEEECCC
Confidence 99999999987540 1389999999999999999999999999999999999998654 443321 56799999999
Q ss_pred ccccCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCcEEeCChhHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 017997 158 FLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRISSVNAMSALC 237 (362)
Q Consensus 158 ~~~~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~ 237 (362)
|+.||.+.+++.+|++||+|++ +++.++++++|+.+.. .+++.+++++||++|+++|+|++++|+++||++.+|
T Consensus 163 ~~~~G~A~~~~~~p~~Iv~G~~-----~~~~~~~~~ly~~~~~-~~~~~~~~~~AE~~Kl~~N~~~a~~Ia~~nE~~~l~ 236 (431)
T 3ojo_A 163 RVLPGKILEELVHNNRIIGGVT-----KACIEAGKRVYRTFVQ-GEMIETDARTAEMSKLMENTYRDVNIALANELTKIC 236 (431)
T ss_dssp CCCTTSHHHHHHHSCEEEEESS-----HHHHHHHHHHHTTTCC-SCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCcchhhcccCCCEEEEeCC-----HHHHHHHHHHHHHHhC-CcEEeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999987754 7899999999999874 467789999999999999999999999999999999
Q ss_pred HHhCCCHHHHHHHhcCCCCCCCCCccCCCCCcccChhHhHHHHHHHHHhCCCchhHHHHHHHHHHHHHhHHHHHHHHHHH
Q 017997 238 EATGANVSQVAFAVGTDSRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIKINDYQKSRFVNRVVAS 317 (362)
Q Consensus 238 ~~~g~d~~~v~~~~~~~~~i~~~~~~~g~g~gg~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~~~N~~~~~~~~~~~~~~ 317 (362)
+++|+|+++|++++++|||+ ++++||+||||||||||+++|.+.|++.| +++++++++|+.||.++++++.+.
T Consensus 237 e~~GiD~~~v~~~~~~~~ri--~~l~pG~G~GG~C~pkD~~~L~~~a~~~~-----~li~~~~~iN~~~~~~v~~~~~~~ 309 (431)
T 3ojo_A 237 NNLNINVLDVIEMANKHPRV--NIHQPGPGVGGHCLAVDPYFIIAKDPENA-----KLIQTGREINNSMPAYVVDTTKQI 309 (431)
T ss_dssp HHTTCCHHHHHHHHTTSTTC--CCCCCCSCCCCCCBCSCC---------CC-----HHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred HHcCCCHHHHHHHHccCCCc--ccCCCCCCccccchhhhHHHHHHHHHHHh-----HHHHHHHHHHHHhHHHHHHHHHHH
Confidence 99999999999999999987 68999999999999999999999999875 799999999999999999999888
Q ss_pred hcCCCCCCEEEEEeeecCCCCCCCCCChhHHHHHHHHhc-cC
Q 017997 318 MFNTVSNKKIAVLGFAFKKDTGDTRETPAIDSHHGEASE-RG 358 (362)
Q Consensus 318 ~~~~~~~~~v~vlG~~~k~~~~d~r~s~~~~~~~~L~~~-~~ 358 (362)
+ +.++++||+|||+||||||||+||||+++|++.|+++ |.
T Consensus 310 l-~~~~~~~v~vlGlafK~~tdD~ReSpa~~i~~~L~~~~g~ 350 (431)
T 3ojo_A 310 I-KALSGNKVTVFGLTYKGDVDDIRESPAFDIYELLNQEPDI 350 (431)
T ss_dssp H-HHSSCCEEEEECCCSSTTSCCCTTCHHHHHHHHHHHSTTC
T ss_pred h-hhcCCCEEEEEeeeeCCCCcchhcChHHHHHHHHHhhcCC
Confidence 7 5689999999999999999999999999999999999 53
No 4
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=100.00 E-value=3.1e-74 Score=565.19 Aligned_cols=344 Identities=38% Similarity=0.610 Sum_probs=320.9
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhh-hcCCCEEEecCHHhhhcCCc
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQ-CRGKNLFFSTDVEKHVSEAD 80 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~-~~~~~l~~t~d~~~a~~~aD 80 (362)
|||+|||+|+||+++|..|+++ ||+|++||+++++++.++++..+++|+++++++.+ ...+++++++|+++++++||
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~--G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~aD 80 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAEL--GANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEAD 80 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGCS
T ss_pred CEEEEECcCHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhcCC
Confidence 7999999999999999999999 99999999999999999999999999999987654 23578999999999899999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhccC----CCceEEeeCC
Q 017997 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSK----GIKFQILSNP 156 (362)
Q Consensus 81 vVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~~~----g~~~~v~~~P 156 (362)
+||+|||+|.+.++ .+|++++.+++++|.++++++++||++||++|+|++++.+.+++... +.+|.++++|
T Consensus 81 vViiaVptp~~~~~-----~~dl~~v~~v~~~i~~~l~~g~iVV~~STv~pgt~~~l~~~l~~~~~~~~~~~d~~v~~~P 155 (450)
T 3gg2_A 81 IIFIAVGTPAGEDG-----SADMSYVLDAARSIGRAMSRYILIVTKSTVPVGSYRLIRKAIQEELDKREVLIDFDIASNP 155 (450)
T ss_dssp EEEECCCCCBCTTS-----SBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHHHHHTTCCCCEEEEECC
T ss_pred EEEEEcCCCcccCC-----CcChHHHHHHHHHHHhhCCCCCEEEEeeeCCCcchHHHHHHHHHhccccCcCcceeEEech
Confidence 99999999987654 89999999999999999999999999999999999999887766421 3678999999
Q ss_pred cccccCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCC-CcEEeCChhHHHHHHHHHhHHHHHHHHHHHHHHH
Q 017997 157 EFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPE-DRILTTNLWSAELSKLAANAFLAQRISSVNAMSA 235 (362)
Q Consensus 157 e~~~~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~ 235 (362)
||+.+|.+.+++.+|+++++|+.+ +++.++++++|+.++.. .+++.+|++++|++|+++|++++++++++||+..
T Consensus 156 e~a~eG~~~~~~~~p~~ivvG~~~----~~~~~~~~~l~~~~~~~~~~~~~~d~~~aE~~Kl~~N~~~a~~ia~~nE~~~ 231 (450)
T 3gg2_A 156 EFLKEGNAIDDFMKPDRVVVGVDS----DRARELITSLYKPMLLNNFRVLFMDIASAEMTKYAANAMLATRISFMNDVAN 231 (450)
T ss_dssp CCCCTTSHHHHHHSCSCEEEEESS----HHHHHHHHHHHTTTCCSCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhcccchhhhccCCCEEEEEcCC----HHHHHHHHHHHHHHhcCCCeEEecCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999873 78999999999988631 2677899999999999999999999999999999
Q ss_pred HHHHhCCCHHHHHHHhcCCCCCCCCCccCCCCCcccChhHhHHHHHHHHHhCCCchhHHHHHHHHHHHHHhHHHHHHHHH
Q 017997 236 LCEATGANVSQVAFAVGTDSRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIKINDYQKSRFVNRVV 315 (362)
Q Consensus 236 l~~~~g~d~~~v~~~~~~~~~i~~~~~~~g~g~gg~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~~~N~~~~~~~~~~~~ 315 (362)
+|+++|+|+++|+++++++||+|+++++||+||||+|+|||+++|++.|++.|++ .+++++++++|++||+++++++.
T Consensus 232 l~~~~Gid~~~v~~~~~~~~rig~~~~~pg~G~gg~c~~KD~~~l~~~a~~~g~~--~~l~~~~~~iN~~~~~~~~~~~~ 309 (450)
T 3gg2_A 232 LCERVGADVSMVRLGIGSDSRIGSKFLYPGCGYGGSCFPKDVKALIRTAEDNGYR--MEVLEAVERVNEKQKSILFDKFS 309 (450)
T ss_dssp HHHHHTCCHHHHHHHHHTSTTTCSSSCCCSSCCCSSHHHHHHHHHHHHHHHTTCC--CHHHHHHHHHHHHHTTHHHHHHH
T ss_pred HHHHhCCCHHHHHHHHcCCCCCCcccCCCCCCCCcccHHhhHHHHHHHHHHcCCC--cHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999 89999999999999999999999
Q ss_pred HHhcCCCCCCEEEEEeeecCCCCCCCCCChhHHHHHHHHhccC
Q 017997 316 ASMFNTVSNKKIAVLGFAFKKDTGDTRETPAIDSHHGEASERG 358 (362)
Q Consensus 316 ~~~~~~~~~~~v~vlG~~~k~~~~d~r~s~~~~~~~~L~~~~~ 358 (362)
+.+++.++++||+|||+||||||||+||||++.|++.|+++|.
T Consensus 310 ~~~~~~~~~~~v~vlGlafK~~~dD~R~sp~~~i~~~L~~~g~ 352 (450)
T 3gg2_A 310 TYYKGNVQGRCVAIWGLSFKPGTDDMREAPSLVLIEKLLEVGC 352 (450)
T ss_dssp HHTTTCCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTC
T ss_pred HHhcccCCCCEEEEEeeeeCCCCcccccChHHHHHHHHHHCCC
Confidence 9998889999999999999999999999999999999999874
No 5
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=100.00 E-value=4.4e-74 Score=564.27 Aligned_cols=347 Identities=26% Similarity=0.393 Sum_probs=313.2
Q ss_pred CceEEEEcCChhHHHHHHHHHHcCCCC-eEEEEeCCHH----HHHHHHcCCCCC--CCCChHHHHhh-hcCCCEEEecCH
Q 017997 1 MVKICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISVS----RINAWNSDQLPI--YEPGLDGVVKQ-CRGKNLFFSTDV 72 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~la~~~~G~-~V~~~d~~~~----~~~~l~~~~~~~--~e~~l~~~~~~-~~~~~l~~t~d~ 72 (362)
+|||+|||+|+||+++|.+|+++ +|| +|++||++++ +++.++++..++ +|+++++++++ ...+++++|+|
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~-~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~ttd- 95 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADA-PCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFECTPD- 95 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHS-TTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEEESC-
T ss_pred CCEEEEECcCHHHHHHHHHHHHh-CCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeEEeCc-
Confidence 58999999999999999999987 479 9999999999 999999999999 89999988764 23578999999
Q ss_pred HhhhcCCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHH-HHHh-ccC--CC
Q 017997 73 EKHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEK-ILTH-NSK--GI 148 (362)
Q Consensus 73 ~~a~~~aDvVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~-~l~~-~~~--g~ 148 (362)
.+++++||+||+|||||.+.++ ...+|++++.++.++|.++++++++||++||++|||++++.. ++++ .+. +.
T Consensus 96 ~ea~~~aDvViiaVptp~~~~~---~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~pgtt~~v~~~ile~~~g~~~~~ 172 (478)
T 3g79_A 96 FSRISELDAVTLAIQTPFANPK---DLEPDFSALIDGIRNVGKYLKPGMLVVLESTITPGTTEGMAKQILEEESGLKAGE 172 (478)
T ss_dssp GGGGGGCSEEEECCCCCCCSSC---CSSCCCHHHHHHHHHHHHHCCTTCEEEECSCCCTTTTTTHHHHHHHHHHCCCBTT
T ss_pred HHHHhcCCEEEEecCCchhccC---CccccHHHHHHHHHHHHhhcCCCcEEEEeCCCChHHHHHHHHHHHHHhcCCCcCC
Confidence 5679999999999999987643 112999999999999999999999999999999999998864 5533 321 46
Q ss_pred ceEEeeCCcccccCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhcc-CCCCcEEeCChhHHHHHHHHHhHHHHHHH
Q 017997 149 KFQILSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHW-VPEDRILTTNLWSAELSKLAANAFLAQRI 227 (362)
Q Consensus 149 ~~~v~~~Pe~~~~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~ae~~Kl~~N~~~~~~i 227 (362)
+|.++++|||+.||.+.+++.+|++||+|++ +++.++++++|+.+ .. .+++.+++++||++|+++|+|++++|
T Consensus 173 d~~v~~~Pe~~~~G~a~~~~~~~~~Iv~G~~-----~~~~~~~~~ly~~~~~~-~~~~~~~~~~aE~~Kl~~N~~~a~~I 246 (478)
T 3g79_A 173 DFALAHAPERVMVGRLLKNIREHDRIVGGID-----EASTKRAVELYSPVLTV-GQVIPMSATAAEVTKTAENTFRDLQI 246 (478)
T ss_dssp TBEEEECCCCCCTTSHHHHHHHSCEEEEESS-----HHHHHHHHHHHGGGCSS-CCEEEEEHHHHHHHHHHHHHHHHHHH
T ss_pred ceeEEeCCccCCccchhhhhcCCcEEEEeCC-----HHHHHHHHHHHhhhccC-CeEEeCCHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999999999999877655 67889999999998 53 57788999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCHHHHHHHhcCCC--CCCCCCccCCCCCcccChhHhHHHHHHHHHhCCCc----h-hHHHHHHHH
Q 017997 228 SSVNAMSALCEATGANVSQVAFAVGTDS--RIGPKFLNASVGFGGSCFQKDILNLVYICECNGLP----E-VAEYWKQVI 300 (362)
Q Consensus 228 a~~nE~~~l~~~~g~d~~~v~~~~~~~~--~i~~~~~~~g~g~gg~cl~kD~~~l~~~a~~~g~~----~-~~~~~~~~~ 300 (362)
+++||++.+|+++|+|+++|+++++++| ||+.++++||+||||||+|||+++|++.|++.|++ | .++++++++
T Consensus 247 a~~nE~~~l~e~~GiD~~~v~~~~~~~~~~ri~~~~~~PG~G~GG~c~~KD~~~l~~~a~~~g~~~~~~~~~~~li~~~~ 326 (478)
T 3g79_A 247 AAINQLALYCEAMGINVYDVRTGVDSLKGEGITRAVLWPGAGVGGHCLTKDTYHLERGVKIGRGELDYPEGADSIYVLAR 326 (478)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHTSCCSSSCCCCCCCCSCCCSSHHHHHHHHHHHHHTTSSCCCCCCSSCCCHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHCCCchhhhccccCCCCCCcchhhHHHHHHHHHHHHHHcCCCcccccchhHHHHHHH
Confidence 9999999999999999999999999999 88889999999999999999999999999999965 2 268999999
Q ss_pred HHHHHhHHHHHHHHHHHhcC---CCCCCEEEEEeeecCCCCCCCCCChhHHHHHHHHhccC
Q 017997 301 KINDYQKSRFVNRVVASMFN---TVSNKKIAVLGFAFKKDTGDTRETPAIDSHHGEASERG 358 (362)
Q Consensus 301 ~~N~~~~~~~~~~~~~~~~~---~~~~~~v~vlG~~~k~~~~d~r~s~~~~~~~~L~~~~~ 358 (362)
++|+.||+++++++.+.+.+ .++++||+|||+||||||||+||||++.|++.|+++|.
T Consensus 327 ~iN~~~~~~~~~~i~~~l~~~~~~~~~~~v~vlGlafK~~tdD~R~Sp~~~i~~~L~~~g~ 387 (478)
T 3g79_A 327 KVNDFMPAHMYNLTVAALERLGKKMDGSKVAMLGWAFIKDSDDARNTPSEPYRDLCLKAGA 387 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCCSTTCEEEEECSSSSTTCSCCTTCTHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHhhcccCCCCCEEEEEeeecCCCCcchhcCcHHHHHHHHHHCCC
Confidence 99999999999999988853 68999999999999999999999999999999999884
No 6
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=100.00 E-value=1.3e-73 Score=553.28 Aligned_cols=329 Identities=26% Similarity=0.380 Sum_probs=286.4
Q ss_pred CceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCc
Q 017997 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (362)
||||+|||+|+||+++|..|++ ||+|++||+++++++.++++..+++|+++++++.+. .+++++++|+++++++||
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~---G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~-~~~l~~ttd~~ea~~~aD 111 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQ---NHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEK-PLNFRATTDKHDAYRNAD 111 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT---TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHS-CCCEEEESCHHHHHTTCS
T ss_pred CCEEEEECcCHHHHHHHHHHHc---CCeEEEEecCHHHhhHHhccCCccccccHHHHHhhc-cCCeEEEcCHHHHHhCCC
Confidence 5899999999999999999985 799999999999999999999999999999887541 357999999988899999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhccCCCceEEeeCCcccc
Q 017997 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEFLA 160 (362)
Q Consensus 81 vVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~~~ 160 (362)
+||+|||+|.+.+ ++.+|++++++++++|.+ ++++++||++||++|||++++.+.+.+. .++|+|||++
T Consensus 112 vViiaVPt~~~~~----~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~STv~pgtt~~l~~~l~~~------~v~~sPe~~~ 180 (432)
T 3pid_A 112 YVIIATPTDYDPK----TNYFNTSTVEAVIRDVTE-INPNAVMIIKSTIPVGFTRDIKERLGID------NVIFSPEFLR 180 (432)
T ss_dssp EEEECCCCEEETT----TTEEECHHHHHHHHHHHH-HCTTSEEEECSCCCTTHHHHHHHHHTCC------CEEECCCCCC
T ss_pred EEEEeCCCccccc----cccccHHHHHHHHHHHHh-cCCCcEEEEeCCCChHHHHHHHHHHhhc------cEeecCccCC
Confidence 9999999986542 236899999999999999 9999999999999999999998777542 5789999999
Q ss_pred cCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhc--cCCCCcEEeCChhHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Q 017997 161 EGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAH--WVPEDRILTTNLWSAELSKLAANAFLAQRISSVNAMSALCE 238 (362)
Q Consensus 161 ~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~~ 238 (362)
||.+.+++.+|++|++|+. ++..+++.++|.. +....++..+++++||++||++|+|++++|+++||++.+|+
T Consensus 181 ~G~A~~~~l~p~rIvvG~~-----~~~~~~~~~ll~~~~~~~~~~v~~~~~~~AE~~Kl~~N~~~a~~Ia~~nEl~~lae 255 (432)
T 3pid_A 181 EGRALYDNLHPSRIVIGER-----SARAERFADLLKEGAIKQDIPTLFTDSTEAEAIKLFANTYLALRVAYFNELDSYAE 255 (432)
T ss_dssp TTSHHHHHHSCSCEEESSC-----SHHHHHHHHHHHHHCSSSSCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhhhcccCCceEEecCC-----HHHHHHHHHHHHhhhccCCCeEEecCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999976 3567888888886 22123577889999999999999999999999999999999
Q ss_pred HhCCCHHHHHHHhcCCCCCCCCCccCCCCCcccChhHhHHHHHHHHHhCCCchhHHHHHHHHHHHHHhHHHHHHHHHHHh
Q 017997 239 ATGANVSQVAFAVGTDSRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIKINDYQKSRFVNRVVASM 318 (362)
Q Consensus 239 ~~g~d~~~v~~~~~~~~~i~~~~~~~g~g~gg~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~ 318 (362)
++|+|+++|++++++|||||.+|++||+||||||||||+++|++.+ .|++ .+++++++++|++||+++++++++.
T Consensus 256 ~~GiD~~~v~~~~~~dprig~~~~~pg~G~GG~C~pkD~~~L~~~~--~~~~--~~li~~~~~~N~~~~~~v~~~i~~~- 330 (432)
T 3pid_A 256 SQGLNSKQIIEGVCLDPRIGNHYNNPSFGYGGYCLPKDTKQLLANY--ESVP--NNIIAAIVDANRTRKDFIADSILAR- 330 (432)
T ss_dssp HTTCCHHHHHHHHHTSTTTCSSSCCCCSCCCTTTHHHHHHHHHHHT--TTSC--CSHHHHHHHHHHHHHHHHHHHHHHT-
T ss_pred HcCCCHHHHHHHHccCCCCCcccCCCCCCCcccchhhhHHHHHHHh--cCCc--hhHHHHHHHHHHhhHHHHHHHHHhh-
Confidence 9999999999999999999999999999999999999999998654 5787 7899999999999999999999765
Q ss_pred cCCCCCCEEEEEeeecCCCCCCCCCChhHHHHHHHHhccC
Q 017997 319 FNTVSNKKIAVLGFAFKKDTGDTRETPAIDSHHGEASERG 358 (362)
Q Consensus 319 ~~~~~~~~v~vlG~~~k~~~~d~r~s~~~~~~~~L~~~~~ 358 (362)
.+++|+||||||||||||+|+||++.|++.|+++|.
T Consensus 331 ----~~~~v~vlGlafK~~tdD~R~Sp~~~i~~~L~~~G~ 366 (432)
T 3pid_A 331 ----KPKVVGVYRLIMKSGSDNFRASSIQGIMKRIKAKGI 366 (432)
T ss_dssp ----CCSSEEEECC-----------CHHHHHHHHHHHTTC
T ss_pred ----cCCEEEEEeeEeCCCCcchhcChHHHHHHHHHhcCC
Confidence 478999999999999999999999999999999985
No 7
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=100.00 E-value=2.9e-71 Score=549.34 Aligned_cols=358 Identities=62% Similarity=1.042 Sum_probs=323.1
Q ss_pred CceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCc
Q 017997 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (362)
||||+|||+|+||+++|.+|+++++||+|++||+++++++.++++..+++|+++++++.....+++++++|+.+++++||
T Consensus 9 ~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~t~~~~~~~~~aD 88 (481)
T 2o3j_A 9 VSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSSDIPKAIAEAD 88 (481)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHCS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHhhcCC
Confidence 47999999999999999999998556999999999999999999999999999988765433456999999988899999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHh-cc--CCCceEEeeCCc
Q 017997 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTH-NS--KGIKFQILSNPE 157 (362)
Q Consensus 81 vVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~-~~--~g~~~~v~~~Pe 157 (362)
+||+|||||.+.+|.++++.+|++++.+++++|.++++++++||++||++||+++.+.+.+++ .. .+.+|+++++||
T Consensus 89 vvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~gt~~~l~~~l~~~~~~~~~~d~~v~~~Pe 168 (481)
T 2o3j_A 89 LIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKIVVEKSTVPVKAAESIGCILREAQKNNENLKFQVLSNPE 168 (481)
T ss_dssp EEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHHTC----CCEEEEECCC
T ss_pred EEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCCCCEEEECCCCCCCHHHHHHHHHHHhhCcCcCCceEEEeCcc
Confidence 999999999865432234579999999999999999999999999999999999999888877 43 246788999999
Q ss_pred ccccCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCcEEeCChhHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 017997 158 FLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRISSVNAMSALC 237 (362)
Q Consensus 158 ~~~~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~ 237 (362)
++.||.+.+++.+++++++|+.++.+++++.+.++++|+.++...+++.++++++||.|+++|++++++++++||+..+|
T Consensus 169 ~~~~G~a~~~~~~~~~iviG~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~d~~~ae~~Kl~~N~~~a~~ia~~nE~~~la 248 (481)
T 2o3j_A 169 FLAEGTAMKDLANPDRVLIGGESSPEGLQAVAELVRIYENWVPRNRIITTNTWSSELSKLVANAFLAQRISSINSISAVC 248 (481)
T ss_dssp CCCTTCHHHHHHSCSCEEEEECSSHHHHHHHHHHHHHHHTTSCGGGEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccchhhcccCCCEEEEEecCchhhHHHHHHHHHHHHhhcCCCeEEecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998999999999875433346889999999998621467788999999999999999999999999999999
Q ss_pred HHhCCCHHHHHHHhcCCCCCCCCCccCCCCCcccChhHhHHHHHHHHHhCCCchhHHHHHHHHHHHHHhHHHHHHHHHHH
Q 017997 238 EATGANVSQVAFAVGTDSRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIKINDYQKSRFVNRVVAS 317 (362)
Q Consensus 238 ~~~g~d~~~v~~~~~~~~~i~~~~~~~g~g~gg~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~~~N~~~~~~~~~~~~~~ 317 (362)
+++|+|+++++++++++||++.++++||+||||||+|||++++++.|++.|+++.++++++++++|++||.++++++.+.
T Consensus 249 ~~~Gid~~~v~~~~~~~~ri~~~~~~pg~g~gg~c~~KD~~~l~~~A~~~g~~~~~~l~~~~~~~N~~~~~~~~~~~~~~ 328 (481)
T 2o3j_A 249 EATGAEISEVAHAVGYDTRIGSKFLQASVGFGGSCFQKDVLSLVYLCESLNLPQVADYWQGVININNWQRRRFADKIIAE 328 (481)
T ss_dssp HHHSCCHHHHHHHHHTSTTTCSSSCCCCSCCCSSSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhCcCHHHHHHHHccCCCCCCCCCCCCCccCCccHHHHHHHHHHHHHHcCCCccchHHHHHHHHHHhhHHHHHHHHHHh
Confidence 99999999999999999999989999999999999999999999999999998778999999999999999999999999
Q ss_pred hcCCCCCCEEEEEeeecCCCCCCCCCChhHHHHHHHHhccC
Q 017997 318 MFNTVSNKKIAVLGFAFKKDTGDTRETPAIDSHHGEASERG 358 (362)
Q Consensus 318 ~~~~~~~~~v~vlG~~~k~~~~d~r~s~~~~~~~~L~~~~~ 358 (362)
+++.++++||+|||+|||+||||+||||+++|++.|+++|.
T Consensus 329 l~~~~~~~~v~vlGlafK~~~dd~R~Spa~~i~~~L~~~g~ 369 (481)
T 2o3j_A 329 LFNTVTDKKIAIFGFAFKKNTGDTRESSAIHVIKHLMEEHA 369 (481)
T ss_dssp TTTCCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTC
T ss_pred hccccCCCeEEEEeeeeCCCCCccccChHHHHHHHHHHCCC
Confidence 87778999999999999999999999999999999999985
No 8
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=100.00 E-value=1.7e-69 Score=535.29 Aligned_cols=348 Identities=37% Similarity=0.582 Sum_probs=317.7
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhh-hcCCCEEEecCHHhhhcCCc
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQ-CRGKNLFFSTDVEKHVSEAD 80 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~-~~~~~l~~t~d~~~a~~~aD 80 (362)
|||+|||+|+||+++|.+|+++ ||+|++||+++++++.+++++.+++++++++++.+ ...+++++++|+++++++||
T Consensus 9 ~~I~VIG~G~vG~~lA~~la~~--G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~~~aD 86 (478)
T 2y0c_A 9 MNLTIIGSGSVGLVTGACLADI--GHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAVAHGD 86 (478)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECCHHHHHHHCS
T ss_pred ceEEEECcCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECCHHHHhhcCC
Confidence 8999999999999999999999 99999999999999999999999999999877653 23567999999988899999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhcc-CC---CceEEeeCC
Q 017997 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNS-KG---IKFQILSNP 156 (362)
Q Consensus 81 vVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~~-~g---~~~~v~~~P 156 (362)
+||+|||||.+.++ .+|++++++++++|.++++++++|+++||++||+++.+.+.+++.. .| .+|.++++|
T Consensus 87 vviiaVptp~~~~~-----~~dl~~v~~v~~~i~~~l~~~~iVV~~STv~~gt~~~l~~~l~~~~~~g~~~~~~~v~~~P 161 (478)
T 2y0c_A 87 VQFIAVGTPPDEDG-----SADLQYVLAAARNIGRYMTGFKVIVDKSTVPVGTAERVRAAVAEELAKRGGDQMFSVVSNP 161 (478)
T ss_dssp EEEECCCCCBCTTS-----SBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHHHHHTTCCCCEEEEECC
T ss_pred EEEEEeCCCcccCC-----CccHHHHHHHHHHHHHhcCCCCEEEEeCCcCCCchHHHHHHHHHHhcCCCCCccEEEEECh
Confidence 99999999987755 8999999999999999999999999999999999999888776541 12 578899999
Q ss_pred cccccCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCC-CCcEEeCChhHHHHHHHHHhHHHHHHHHHHHHHHH
Q 017997 157 EFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVP-EDRILTTNLWSAELSKLAANAFLAQRISSVNAMSA 235 (362)
Q Consensus 157 e~~~~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~ 235 (362)
|++.||.+.+++.+|+++++|+.+.....++.+.++++|+.++. ..++..+|++.+||.|+++|++++++++++||+..
T Consensus 162 e~~~eG~~~~~~~~p~~iviG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~di~~ae~~Kl~~N~~~a~~ia~~nE~~~ 241 (478)
T 2y0c_A 162 EFLKEGAAVDDFTRPDRIVIGCDDDVPGERARELMKKLYAPFNRNHERTLYMDVRSAEFTKYAANAMLATRISFMNELAN 241 (478)
T ss_dssp CCCCTTCHHHHHHSCSCEEEECCSSHHHHHHHHHHHHHTGGGGSSSCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhcccceeeccCCCCEEEEEECCCcccHHHHHHHHHHHHHHhccCCeEEcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998876310001788999999998762 24677889999999999999999999999999999
Q ss_pred HHHHhCCCHHHHHHHhcCCCCCCCCCccCCCCCcccChhHhHHHHHHHHHhCCCchhHHHHHHHHHHHHHhHHHHHHHHH
Q 017997 236 LCEATGANVSQVAFAVGTDSRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIKINDYQKSRFVNRVV 315 (362)
Q Consensus 236 l~~~~g~d~~~v~~~~~~~~~i~~~~~~~g~g~gg~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~~~N~~~~~~~~~~~~ 315 (362)
+|+++|+|+++++++++.++|++..+++||+|+||+|+|||++++.+.|++.|++ .++++++.++|+.||+++++++.
T Consensus 242 la~~~Gid~~~v~~~i~~~~rig~~~~~pG~g~gg~c~~kD~~~l~~~A~~~gv~--~pl~~~v~~in~~~~~~~~~~~~ 319 (478)
T 2y0c_A 242 LADRFGADIEAVRRGIGSDPRIGYHFLYAGCGYGGSCFPKDVEALIRTADEHGQS--LQILKAVSSVNATQKRVLADKIV 319 (478)
T ss_dssp HHHHTTCCHHHHHHHHHTSTTTCSTTCCCSSCCCSSSHHHHHHHHHHHHHHTTCC--CHHHHHHHHHHHHHTTHHHHHHH
T ss_pred HHHHhCCCHHHHHHHHhcCCccCcccCCCCcccccCcCHHHHHHHHHHHHHcCCC--cHHHHHHHHHHHHhHHHHHHHHH
Confidence 9999999999999999999999888899999999999999999999999999999 89999999999999999999999
Q ss_pred HHhcCCCCCCEEEEEeeecCCCCCCCCCChhHHHHHHHHhccC
Q 017997 316 ASMFNTVSNKKIAVLGFAFKKDTGDTRETPAIDSHHGEASERG 358 (362)
Q Consensus 316 ~~~~~~~~~~~v~vlG~~~k~~~~d~r~s~~~~~~~~L~~~~~ 358 (362)
+.+++.++++||+||||||||||||+||||++.|++.|+++|.
T Consensus 320 ~~~~~~~~~~~v~vlGlafK~~~dD~R~Sp~~~i~~~L~~~g~ 362 (478)
T 2y0c_A 320 ARFGEDLTGRTFAIWGLAFKPNTDDMREAPSRELIAELLSRGA 362 (478)
T ss_dssp HHHCSCCTTCEEEEECCSSSSSCCCCTTCHHHHHHHHHHHTTC
T ss_pred HHhcccCCCCEEEEEecccCCCCCccccChHHHHHHHHHHCCC
Confidence 9987789999999999999999999999999999999999985
No 9
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=100.00 E-value=1.5e-68 Score=528.81 Aligned_cols=358 Identities=68% Similarity=1.097 Sum_probs=321.4
Q ss_pred CceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCc
Q 017997 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (362)
||||+|||+|+||+++|..|+++++||+|++||+++++++.++++..+++++++++++.+....++++++|+++++++||
T Consensus 5 ~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~t~~~~e~~~~aD 84 (467)
T 2q3e_A 5 IKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIKEAD 84 (467)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHCS
T ss_pred ccEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHHhcCC
Confidence 47999999999999999999998557999999999999999999999999999987765433346899999988899999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhccC-CCceEEeeCCccc
Q 017997 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSK-GIKFQILSNPEFL 159 (362)
Q Consensus 81 vVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~~~-g~~~~v~~~Pe~~ 159 (362)
+||+|||+|.+.++...++.+|++++.++++++.++++++++|+++||++|++++.+.+.+++... +.++.+.++||++
T Consensus 85 vViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~g~~~~l~~~l~~~~~~~~d~~V~~~Pe~~ 164 (467)
T 2q3e_A 85 LVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAAESIRRIFDANTKPNLNLQVLSNPEFL 164 (467)
T ss_dssp EEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEECSCCCTTHHHHHHHHHHHTCCTTCEEEEEECCCCC
T ss_pred EEEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEECCcCCchHHHHHHHHHHHhCCCCCCeEEEeCHHHh
Confidence 999999999764321112369999999999999999999999999999999999999888877543 4678899999999
Q ss_pred ccCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCcEEeCChhHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Q 017997 160 AEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRISSVNAMSALCEA 239 (362)
Q Consensus 160 ~~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~~~ 239 (362)
.+|.+.+++.+++++++|+..+..++++.+.++++|+.+....+++.++++.+|+.|+++|++++++++++||+..+|++
T Consensus 165 ~~G~~~~d~~~~~rivvGg~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~ae~~Kl~~N~~~a~~ia~~nE~~~l~~~ 244 (467)
T 2q3e_A 165 AEGTAIKDLKNPDRVLIGGDETPEGQRAVQALCAVYEHWVPREKILTTNTWSSELSKLAANAFLAQRISSINSISALCEA 244 (467)
T ss_dssp CTTSHHHHHHSCSCEEEECCSSHHHHHHHHHHHHHHTTTSCGGGEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcccchhhccCCCEEEECCCCCCCCHHHHHHHHHHHHHhccCCeEEecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999983222247889999999999831247788899999999999999999999999999999999
Q ss_pred hCCCHHHHHHHhcCCCCCCCCCccCCCCCcccChhHhHHHHHHHHHhCCCchhHHHHHHHHHHHHHhHHHHHHHHHHHhc
Q 017997 240 TGANVSQVAFAVGTDSRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIKINDYQKSRFVNRVVASMF 319 (362)
Q Consensus 240 ~g~d~~~v~~~~~~~~~i~~~~~~~g~g~gg~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~ 319 (362)
+|+|++++++++++++++++++++||+||||+|+|||++++++.|++.|+++..+++++++++|+.|++++++++.+.+.
T Consensus 245 ~Gid~~~v~~~~~~~~~~~~~~~~pg~g~gg~c~~kD~~~l~~~a~~~g~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 324 (467)
T 2q3e_A 245 TGADVEEVATAIGMDQRIGNKFLKASVGFGGSCFQKDVLNLVYLCEALNLPEVARYWQQVIDMNDYQRRRFASRIIDSLF 324 (467)
T ss_dssp HTCCHHHHHHHHHTSTTTCSSSCCCCSCCCSSSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hCcCHHHHHHHHcCCCCCCccccCCCCCCCCccHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHhHHHHHHHHHHHhh
Confidence 99999999999999999888899999999999999999999999999999877899999999999999999999998887
Q ss_pred CCCCCCEEEEEeeecCCCCCCCCCChhHHHHHHHHhccC
Q 017997 320 NTVSNKKIAVLGFAFKKDTGDTRETPAIDSHHGEASERG 358 (362)
Q Consensus 320 ~~~~~~~v~vlG~~~k~~~~d~r~s~~~~~~~~L~~~~~ 358 (362)
+.++++||+|||+||||||||+||||++.|++.|+++|.
T Consensus 325 ~~~~~~~v~vlGlafK~~~dD~R~sp~~~i~~~L~~~g~ 363 (467)
T 2q3e_A 325 NTVTDKKIAILGFAFKKDTGDTRESSSIYISKYLMDEGA 363 (467)
T ss_dssp TCCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTC
T ss_pred cccCCCEEEEEeeccCCCCcchhhChHHHHHHHHHHCCC
Confidence 778999999999999999999999999999999999985
No 10
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=100.00 E-value=2.1e-66 Score=504.10 Aligned_cols=338 Identities=23% Similarity=0.336 Sum_probs=298.8
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcE
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (362)
|||+|||+|+||+++|..|++ ||+|++||+++++++.++++..+++|+++++++.. ..+++++++++.++++++|+
T Consensus 1 MkI~VIG~G~vG~~~A~~La~---G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~-~~~~l~~t~~~~~~~~~aDv 76 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL---QNEVTIVDILPSKVDKINNGLSPIQDEYIEYYLKS-KQLSIKATLDSKAAYKEAEL 76 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT---TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHH-SCCCEEEESCHHHHHHHCSE
T ss_pred CEEEEECCCHHHHHHHHHHhC---CCEEEEEECCHHHHHHHHcCCCCcCCCCHHHHHHh-ccCcEEEeCCHHHHhcCCCE
Confidence 799999999999999999986 69999999999999999999999999998887654 24568899998888999999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhccCCCceEEeeCCccccc
Q 017997 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEFLAE 161 (362)
Q Consensus 82 Vii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~~~~ 161 (362)
||+|||+|.+.. ++.+|++++.++++++.+ ++++++|+.+||++||+++.+.+.+.+ + .++++||+..|
T Consensus 77 viiavpt~~~~~----~~~~dl~~v~~v~~~i~~-l~~~~iVV~~ST~~~g~~~~l~~~~~~-----~-~v~~~Pe~~~~ 145 (402)
T 1dlj_A 77 VIIATPTNYNSR----INYFDTQHVETVIKEVLS-VNSHATLIIKSTIPIGFITEMRQKFQT-----D-RIIFSPEFLRE 145 (402)
T ss_dssp EEECCCCCEETT----TTEECCHHHHHHHHHHHH-HCSSCEEEECSCCCTTHHHHHHHHTTC-----S-CEEECCCCCCT
T ss_pred EEEecCCCcccC----CCCccHHHHHHHHHHHHh-hCCCCEEEEeCCCCccHHHHHHHHhCC-----C-eEEECCccccC
Confidence 999999985321 237899999999999999 999999999999999999988765543 2 57899999999
Q ss_pred CccccccCCCCeEEEecCCCc--chHHHHHHHHHHHhc-cCCCC-cEEeCChhHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 017997 162 GTAIQDLFNPDRVLIGGRETP--EGQKAVKALKDVYAH-WVPED-RILTTNLWSAELSKLAANAFLAQRISSVNAMSALC 237 (362)
Q Consensus 162 g~a~~~~~~~~~viiG~~~~~--~~~~~~~~~~~l~~~-~~~~~-~~~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~ 237 (362)
|.+..++.+++++++|+.+.. ...+..+.+.++|.. ..... +++.++++.+||.|+++|++++++++++||+..+|
T Consensus 146 G~a~~~~~~~~riviG~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~di~~ae~~Kl~~N~~~a~~ia~~nE~~~l~ 225 (402)
T 1dlj_A 146 SKALYDNLYPSRIIVSCEENDSPKVKADAEKFALLLKSAAKKNNVPVLIMGASEAEAVKLFANTYLALRVAYFNELDTYA 225 (402)
T ss_dssp TSTTHHHHSCSCEEEECCTTSCHHHHHHHHHHHHHHHHHCSCSCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhhcccCCCEEEEeCCCcccchhHHHHHHHHHHHhhhhccCCceEEecChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999899999999987311 012556778888875 43212 46778999999999999999999999999999999
Q ss_pred HHhCCCHHHHHHHhcCCCCCCCCCccCCCCCcccChhHhHHHHHHHHHhCCCchhHHHHHHHHHHHHHhHHHHHHHHHHH
Q 017997 238 EATGANVSQVAFAVGTDSRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIKINDYQKSRFVNRVVAS 317 (362)
Q Consensus 238 ~~~g~d~~~v~~~~~~~~~i~~~~~~~g~g~gg~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~~~N~~~~~~~~~~~~~~ 317 (362)
+++|+|+++++++++.+||++.+++.||+||||||+|||+++|++.|+ |++ .+++++++++|++||.++++++.+.
T Consensus 226 ~~~Gid~~~v~~~~~~~~ri~~~~~~pg~g~gg~c~~kD~~~l~~~a~--~~~--~~l~~~~~~~N~~~~~~~~~~~~~~ 301 (402)
T 1dlj_A 226 ESRKLNSHMIIQGISYDDRIGMHYNNPSFGYGGYSLPKDTKQLLANYN--NIP--QTLIEAIVSSNNVRKSYIAKQIINV 301 (402)
T ss_dssp HHTTCCHHHHHHHHHTSTTTCSSSCCCCSSCCSSHHHHHHHHHHHHHT--TSS--CSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhCCCHHHHHHHhccCCCCCcCCCCCCCccCCccHHhhHHHHHHHhc--CCC--hHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 999999999999999999999889999999999999999999999885 777 7899999999999999999999998
Q ss_pred hcC-CCCCCEEEEEeeecCCCCCCCCCChhHHHHHHHHhccC
Q 017997 318 MFN-TVSNKKIAVLGFAFKKDTGDTRETPAIDSHHGEASERG 358 (362)
Q Consensus 318 ~~~-~~~~~~v~vlG~~~k~~~~d~r~s~~~~~~~~L~~~~~ 358 (362)
+++ .+++++|+|||+||||||||+||||++.|++.|+++|.
T Consensus 302 ~~~~~~~~~~v~vlGlafK~~~~d~R~sp~~~i~~~L~~~g~ 343 (402)
T 1dlj_A 302 LKEQESPVKVVGVYRLIMKSNSDNFRESAIKDVIDILKSKDI 343 (402)
T ss_dssp HTTSCCSSCEEEEECCCSSTTCSCCTTCHHHHHHHHHHTSSC
T ss_pred hhhcCCCCCEEEEEeeeccCCCcccccChHHHHHHHHHHCCC
Confidence 864 68999999999999999999999999999999999984
No 11
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=100.00 E-value=4.5e-65 Score=500.25 Aligned_cols=337 Identities=28% Similarity=0.460 Sum_probs=308.9
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhh-cCCCEEEecCHHhhhcCCc
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQC-RGKNLFFSTDVEKHVSEAD 80 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~-~~~~l~~t~d~~~a~~~aD 80 (362)
|||+|||+|+||+++|..|+++ ||+|++||+++++++.+++++.+++++++++++... ..+++++++|+++++++||
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~--G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~aD 78 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSAR--GHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSD 78 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCS
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhccCC
Confidence 7999999999999999999999 999999999999999999999999999999877542 2467999999988899999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCC---CCEEEEeeCCcccc-HHHHHHHHHhc-cC--CCceEEe
Q 017997 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKS---DKIVVEKSTVPVKT-AEAIEKILTHN-SK--GIKFQIL 153 (362)
Q Consensus 81 vVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~---~~iVv~~STv~~gt-~~~l~~~l~~~-~~--g~~~~v~ 153 (362)
+||+|||+|.+.++ .+|++++.+++++|.+++++ +++|+++||+++|+ .+.+.+.+++. +. +.++.+.
T Consensus 79 vviiaVptp~~~~~-----~~dl~~v~~v~~~i~~~l~~~~~~~iVV~~Stv~~g~t~~~l~~~l~~~~g~~~~~~~~v~ 153 (436)
T 1mv8_A 79 VSFICVGTPSKKNG-----DLDLGYIETVCREIGFAIREKSERHTVVVRSTVLPGTVNNVVIPLIEDCSGKKAGVDFGVG 153 (436)
T ss_dssp EEEECCCCCBCTTS-----SBCCHHHHHHHHHHHHHHTTCCSCCEEEECSCCCTTHHHHTHHHHHHHHHSCCBTTTBEEE
T ss_pred EEEEEcCCCcccCC-----CcchHHHHHHHHHHHHHhcccCCCcEEEEeCCcCCCchHHHHHHHHHHhcCcccCCcEEEE
Confidence 99999999987654 89999999999999999998 99999999999999 67788888764 21 3578899
Q ss_pred eCCcccccCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCcEEeCChhHHHHHHHHHhHHHHHHHHHHHHH
Q 017997 154 SNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRISSVNAM 233 (362)
Q Consensus 154 ~~Pe~~~~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~ 233 (362)
++||++.||.+.+++.+++++++|+. ++++.+.++++|+.++. ++..++++.+||.|++.|++++++++++||+
T Consensus 154 ~~Pe~~~~G~~~~~~~~~~~iv~G~~----~~~~~~~~~~l~~~~~~--~v~~~~~~~ae~~Kl~~N~~~a~~ia~~nE~ 227 (436)
T 1mv8_A 154 TNPEFLRESTAIKDYDFPPMTVIGEL----DKQTGDLLEEIYRELDA--PIIRKTVEVAEMIKYTCNVWHAAKVTFANEI 227 (436)
T ss_dssp ECCCCCCTTSHHHHHHSCSCEEEEES----SHHHHHHHHHHHTTSSS--CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ECcccccccccchhccCCCEEEEEcC----CHHHHHHHHHHHhccCC--CEEcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999988875 37888999999999863 5666899999999999999999999999999
Q ss_pred HHHHHHhCCCHHHHHHHhcCCCCCC--CCCccCCCCCcccChhHhHHHHHHHHHhCCCchhHHHHHHHHHHHHHhHHHHH
Q 017997 234 SALCEATGANVSQVAFAVGTDSRIG--PKFLNASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIKINDYQKSRFV 311 (362)
Q Consensus 234 ~~l~~~~g~d~~~v~~~~~~~~~i~--~~~~~~g~g~gg~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~~~N~~~~~~~~ 311 (362)
..+|+++|+|++++.++++.+++++ +++++||+||||+|+|||++++.+.|+++|++ .+++++++++|+.||++++
T Consensus 228 ~~l~~~~Gid~~~v~~~~~~~~r~~~~~~~~~pg~g~gg~~~~kD~~~l~~~a~~~g~~--~pl~~~v~~in~~~~~~~~ 305 (436)
T 1mv8_A 228 GNIAKAVGVDGREVMDVICQDHKLNLSRYYMRPGFAFGGSCLPKDVRALTYRASQLDVE--HPMLGSLMRSNSNQVQKAF 305 (436)
T ss_dssp HHHHHHTTSCHHHHHHHHTTCTTTTTSSTTCSCCSCCCSSSHHHHHHHHHHHHHHTTCC--CTTGGGHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCHHHHHHHhcCCCCCCCcccCCCCcccccCcCcHhhHHHHHHHHHHcCCC--cHHHHHHHHHHhHhHHHHH
Confidence 9999999999999999999999988 78899999999999999999999999999999 8999999999999999999
Q ss_pred HHHHHHhcCCCCCCEEEEEeeecCCCCCCCCCChhHHHHHHHHhccC
Q 017997 312 NRVVASMFNTVSNKKIAVLGFAFKKDTGDTRETPAIDSHHGEASERG 358 (362)
Q Consensus 312 ~~~~~~~~~~~~~~~v~vlG~~~k~~~~d~r~s~~~~~~~~L~~~~~ 358 (362)
+++++. +++||+|||+||||||||+||||++.|++.|+++|.
T Consensus 306 ~~~~~~-----~~~~v~vlGlafK~~~~d~r~s~~~~i~~~L~~~g~ 347 (436)
T 1mv8_A 306 DLITSH-----DTRKVGLLGLSFKAGTDDLRESPLVELAEMLIGKGY 347 (436)
T ss_dssp HHHTTS-----SCCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTC
T ss_pred HHHHHh-----cCCEEEEEccccCCCCCccccCcHHHHHHHHHHCCC
Confidence 998643 789999999999999999999999999999999985
No 12
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=100.00 E-value=1.2e-33 Score=263.54 Aligned_cols=251 Identities=18% Similarity=0.198 Sum_probs=204.0
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcE
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (362)
|||+|||+|+||.++|.+|+++ ||+|++||+++++++.+++. +++++++++++++ +|+
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~--G~~V~~~dr~~~~~~~~~~~-------------------g~~~~~~~~~~~~-aDv 73 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEW--PGGVTVYDIRIEAMTPLAEA-------------------GATLADSVADVAA-ADL 73 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTS--TTCEEEECSSTTTSHHHHHT-------------------TCEECSSHHHHTT-SSE
T ss_pred CeEEEECcCHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHC-------------------CCEEcCCHHHHHh-CCE
Confidence 5899999999999999999999 99999999999998887752 3677889999888 999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhccCCCceEEeeCCccccc
Q 017997 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEFLAE 161 (362)
Q Consensus 82 Vii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~~~~ 161 (362)
||+|||++. .++++++++.+.++++++|+++||++|++++++.+.+.+. |. .++.+|....+
T Consensus 74 vi~~vp~~~--------------~~~~v~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~--g~--~~~~~pv~g~~ 135 (296)
T 3qha_A 74 IHITVLDDA--------------QVREVVGELAGHAKPGTVIAIHSTISDTTAVELARDLKAR--DI--HIVDAPVSGGA 135 (296)
T ss_dssp EEECCSSHH--------------HHHHHHHHHHTTCCTTCEEEECSCCCHHHHHHHHHHHGGG--TC--EEEECCEESCH
T ss_pred EEEECCChH--------------HHHHHHHHHHHhcCCCCEEEEeCCCCHHHHHHHHHHHHHc--CC--EEEeCCCcCCH
Confidence 999998642 4677889999999999999999999999999988877664 22 34566765544
Q ss_pred CccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCcEEeCChhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhC
Q 017997 162 GTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRISSVNAMSALCEATG 241 (362)
Q Consensus 162 g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~~~~g 241 (362)
..+..+. ..+++|++ +++.++++++|+.++. .++++++++.+++.|+++|.+.+.++++++|+..+|++.|
T Consensus 136 ~~a~~g~---l~~~~gg~-----~~~~~~~~~ll~~~g~-~~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~E~~~l~~~~G 206 (296)
T 3qha_A 136 AAAARGE---LATMVGAD-----REVYERIKPAFKHWAA-VVIHAGEPGAGTRMKLARNMLTFTSYAAACEAMKLAEAAG 206 (296)
T ss_dssp HHHHHTC---EEEEEECC-----HHHHHHHHHHHHHHEE-EEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHhcCC---ccEEecCC-----HHHHHHHHHHHHHHcC-CeEEcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 4332221 14677875 7889999999999873 4556678999999999999999999999999999999999
Q ss_pred CCHHHH------HHHhcCCCCC-----CCCCcc-CCCCCcc-----cChhHhHHHHHHHHHhCCCchhHHHHHHHHHHH
Q 017997 242 ANVSQV------AFAVGTDSRI-----GPKFLN-ASVGFGG-----SCFQKDILNLVYICECNGLPEVAEYWKQVIKIN 303 (362)
Q Consensus 242 ~d~~~v------~~~~~~~~~i-----~~~~~~-~g~g~gg-----~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~~~N 303 (362)
+|++++ .++++..+.- +.+++. .++||+. .|++||+.++.+.|++.|++ .|+++.+.+.=
T Consensus 207 ~d~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~f~~~~~~~~~~~KD~~~~~~~a~~~g~~--~p~~~~~~~~~ 283 (296)
T 3qha_A 207 LDLQALGRVVRHTDALTGGPGAIMVRDNMKDLEPDNFLYQPFLHTRGLGEKDLSLALALGEAVSVD--LPLARLAYEGL 283 (296)
T ss_dssp CCHHHHHHHHHHHHHHHCCGGGGCCCSSCSCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHHHH
T ss_pred CCHHHHhhhcchHHHHhcCcccCHHhhchhhhhcCCCCCchhhhhhHHHHHHHHHHHHHHHHcCCC--ChHHHHHHHHH
Confidence 999999 9988753210 222222 2578888 99999999999999999999 78888766543
No 13
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=100.00 E-value=4.8e-33 Score=262.18 Aligned_cols=252 Identities=16% Similarity=0.133 Sum_probs=206.5
Q ss_pred CceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCc
Q 017997 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (362)
+|||+|||+|+||.++|..|++. ||+|++||+++++++.+.+. .+..+++++++++++|
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~--G~~V~~~dr~~~~~~~l~~~-------------------g~~~~~~~~e~~~~aD 89 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEA--GYALQVWNRTPARAASLAAL-------------------GATIHEQARAAARDAD 89 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTT-------------------TCEEESSHHHHHTTCS
T ss_pred CCEEEEECccHHHHHHHHHHHhC--CCeEEEEcCCHHHHHHHHHC-------------------CCEeeCCHHHHHhcCC
Confidence 47999999999999999999999 99999999999999988762 3567889999899999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHH--HHHhhcCCCCEEEEeeCCccccHHHHHHHHHhccCCCceEEeeCCcc
Q 017997 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAAR--VIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEF 158 (362)
Q Consensus 81 vVii~vptp~~~~g~~~~~~~d~~~l~~~~~--~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~ 158 (362)
+||+|||++. .++.++. ++.+.++++++|++.||++|.+++.+.+.+.+. | ..++.+|..
T Consensus 90 vVi~~vp~~~--------------~~~~v~~~~~~~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~--g--~~~~~~pv~ 151 (320)
T 4dll_A 90 IVVSMLENGA--------------VVQDVLFAQGVAAAMKPGSLFLDMASITPREARDHAARLGAL--G--IAHLDTPVS 151 (320)
T ss_dssp EEEECCSSHH--------------HHHHHHTTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHT--T--CEEEECCEE
T ss_pred EEEEECCCHH--------------HHHHHHcchhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHc--C--CEEEeCCCc
Confidence 9999998642 3566666 788889999999999999999999888777664 2 234567866
Q ss_pred cccCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCcEEeCChhHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Q 017997 159 LAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRISSVNAMSALCE 238 (362)
Q Consensus 159 ~~~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~~ 238 (362)
..+..+..+ ...+++|++ +++.++++++|+.+ . .+++.++++.+++.|+++|.+.+.++++++|+..+|+
T Consensus 152 g~~~~a~~g---~l~i~~gg~-----~~~~~~~~~ll~~~-~-~~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~ 221 (320)
T 4dll_A 152 GGTVGAEQG---TLVIMAGGK-----PADFERSLPLLKVF-G-RATHVGPHGSGQLTKLANQMIVGITIGAVAEALLFAT 221 (320)
T ss_dssp CHHHHHHHT---CEEEEEESC-----HHHHHHHHHHHHHH-E-EEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHhHHhcC---CeeEEeCCC-----HHHHHHHHHHHHhc-C-CEEEeCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555433222 124678875 78899999999998 4 5667778999999999999999999999999999999
Q ss_pred HhCCCHHHHHHHhcCCCCCC-------CCCc--cCCCCCcccChhHhHHHHHHHHHhCCCchhHHHHHHHHHHH
Q 017997 239 ATGANVSQVAFAVGTDSRIG-------PKFL--NASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIKIN 303 (362)
Q Consensus 239 ~~g~d~~~v~~~~~~~~~i~-------~~~~--~~g~g~gg~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~~~N 303 (362)
+.|+|++++.++++.++..+ +.++ .+.+||+..|++||+.++.+.+++.|++ .++.+++.+.-
T Consensus 222 ~~G~d~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~gf~~~~~~KDl~~~~~~a~~~g~~--~p~~~~~~~~~ 293 (320)
T 4dll_A 222 KGGADMAKVKEAITGGFADSRVLQLHGQRMVERDFAPRARLSIQLKDMRNALATAQEIGFD--APITGLFEQLY 293 (320)
T ss_dssp HTSCCHHHHHHHHTTSTTCBHHHHTHHHHHHTTCCCCSSBHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHHHH
T ss_pred HcCCCHHHHHHHHHcccccCHHHHHhhhhhccCCCCCcccHHHHHHHHHHHHHHHHHcCCC--ChHHHHHHHHH
Confidence 99999999999998764211 1111 2357899999999999999999999999 78887766544
No 14
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=100.00 E-value=3.1e-33 Score=262.38 Aligned_cols=254 Identities=13% Similarity=0.113 Sum_probs=206.7
Q ss_pred CceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCc
Q 017997 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (362)
||||+|||+|+||.++|..|+++ ||+|++||+++++++.+.+. .++.+++++++++++|
T Consensus 21 m~~I~iIG~G~mG~~~A~~l~~~--G~~V~~~dr~~~~~~~l~~~-------------------g~~~~~~~~~~~~~aD 79 (310)
T 3doj_A 21 MMEVGFLGLGIMGKAMSMNLLKN--GFKVTVWNRTLSKCDELVEH-------------------GASVCESPAEVIKKCK 79 (310)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSGGGGHHHHHT-------------------TCEECSSHHHHHHHCS
T ss_pred CCEEEEECccHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHC-------------------CCeEcCCHHHHHHhCC
Confidence 68999999999999999999999 99999999999999888752 2567788999899999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHH---HHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhccCCCceEEeeCCc
Q 017997 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAA---RVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPE 157 (362)
Q Consensus 81 vVii~vptp~~~~g~~~~~~~d~~~l~~~~---~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe 157 (362)
+||+|||+|. .+++++ +++.+.++++++|+++||++|++++.+.+.+++. |. .++.+|.
T Consensus 80 vvi~~vp~~~--------------~~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~--g~--~~v~~pv 141 (310)
T 3doj_A 80 YTIAMLSDPC--------------AALSVVFDKGGVLEQICEGKGYIDMSTVDAETSLKINEAITGK--GG--RFVEGPV 141 (310)
T ss_dssp EEEECCSSHH--------------HHHHHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHT--TC--EEEECCE
T ss_pred EEEEEcCCHH--------------HHHHHHhCchhhhhccCCCCEEEECCCCCHHHHHHHHHHHHHc--CC--EEEeCCC
Confidence 9999998642 356666 7788889999999999999999999988877664 22 3456786
Q ss_pred ccccCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCcEEeCChhHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 017997 158 FLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRISSVNAMSALC 237 (362)
Q Consensus 158 ~~~~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~ 237 (362)
...+..+..+ ...+++|++ +++.++++++|+.++. .+++.++++.+++.|++.|.+.+.++++++|+..+|
T Consensus 142 ~g~~~~a~~g---~l~i~~gg~-----~~~~~~~~~ll~~~g~-~~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~ 212 (310)
T 3doj_A 142 SGSKKPAEDG---QLIILAAGD-----KALFEESIPAFDVLGK-RSFYLGQVGNGAKMKLIVNMIMGSMMNAFSEGLVLA 212 (310)
T ss_dssp ECCHHHHHHT---CEEEEEEEC-----HHHHHHHHHHHHHHEE-EEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCChhHHhcC---CeEEEEcCC-----HHHHHHHHHHHHHhCC-CEEEeCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6554443322 224677876 7889999999999873 355667899999999999999999999999999999
Q ss_pred HHhCCCHHHHHHHhcCCCCCCC-------CCc--cCCCCCcccChhHhHHHHHHHHHhCCCchhHHHHHHHHHHHH
Q 017997 238 EATGANVSQVAFAVGTDSRIGP-------KFL--NASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIKIND 304 (362)
Q Consensus 238 ~~~g~d~~~v~~~~~~~~~i~~-------~~~--~~g~g~gg~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~~~N~ 304 (362)
++.|+|++++.++++.++..++ .++ .+.+||++.|++||+.++++.|++.|++ .++++++.++-+
T Consensus 213 ~~~G~d~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~f~~~~~~KDl~~~~~~a~~~g~~--~p~~~~~~~~~~ 286 (310)
T 3doj_A 213 DKSGLSSDTLLDILDLGAMTNPMFKGKGPSMNKSSYPPAFPLKHQQKDMRLALALGDENAVS--MPVAAAANEAFK 286 (310)
T ss_dssp HHTTSCHHHHHHHHHHSTTCCHHHHHHHHHHHTTCCCCSSBHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHHHHH
T ss_pred HHcCCCHHHHHHHHHhcccccHHHHHHhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHcCCC--ChHHHHHHHHHH
Confidence 9999999999999987542111 111 2357899999999999999999999999 788887665443
No 15
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=100.00 E-value=7e-33 Score=258.06 Aligned_cols=252 Identities=17% Similarity=0.176 Sum_probs=207.8
Q ss_pred CceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCc
Q 017997 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (362)
|+||+|||+|.||.+||.+|+++ ||+|++|||++++++.+.+. ..+..+++.++++.+|
T Consensus 3 M~kIgfIGlG~MG~~mA~~L~~~--G~~v~v~dr~~~~~~~l~~~-------------------Ga~~a~s~~e~~~~~d 61 (300)
T 3obb_A 3 MKQIAFIGLGHMGAPMATNLLKA--GYLLNVFDLVQSAVDGLVAA-------------------GASAARSARDAVQGAD 61 (300)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHT--TCEEEEECSSHHHHHHHHHT-------------------TCEECSSHHHHHTTCS
T ss_pred cCEEEEeeehHHHHHHHHHHHhC--CCeEEEEcCCHHHHHHHHHc-------------------CCEEcCCHHHHHhcCC
Confidence 67999999999999999999999 99999999999999988752 3567889999999999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHH---HHHhhcCCCCEEEEeeCCccccHHHHHHHHHhccCCCceEEeeCCc
Q 017997 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAAR---VIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPE 157 (362)
Q Consensus 81 vVii~vptp~~~~g~~~~~~~d~~~l~~~~~---~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe 157 (362)
+||+|+|++ ..+++++. .+.+.++++++||++||+.|.+++++.+.+++.+ ..++.+|.
T Consensus 62 vv~~~l~~~--------------~~v~~V~~~~~g~~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G----~~~lDaPV 123 (300)
T 3obb_A 62 VVISMLPAS--------------QHVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERG----LAMLDAPV 123 (300)
T ss_dssp EEEECCSCH--------------HHHHHHHHSSSSSTTSCCC-CEEEECSCCCHHHHHHHHHHHHTTT----CEEEECCE
T ss_pred ceeecCCch--------------HHHHHHHhchhhhhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcC----CEEEecCC
Confidence 999999864 24566654 3667788999999999999999999998887753 35678897
Q ss_pred ccccCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCcEEeCChhHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 017997 158 FLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRISSVNAMSALC 237 (362)
Q Consensus 158 ~~~~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~ 237 (362)
..++..+..+.. .+++||+ ++++++++++|+.++. ..++.++++.+..+|+++|.+.+.+++.+.|...++
T Consensus 124 sGg~~~A~~G~L---~imvGG~-----~~~~~~~~p~l~~~g~-~i~~~G~~G~g~~~Kl~~N~l~~~~~~a~aEa~~la 194 (300)
T 3obb_A 124 SGGTAGAAAGTL---TFMVGGD-----AEALEKARPLFEAMGR-NIFHAGPDGAGQVAKVCNNQLLAVLMIGTAEAMALG 194 (300)
T ss_dssp ESCHHHHHHTCE---EEEEESC-----HHHHHHHHHHHHHHEE-EEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHhCCE---EEEEeCC-----HHHHHHHHHHHHHhCC-CEEEeCCccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777666654433 4788987 7899999999999973 455678999999999999999999999999999999
Q ss_pred HHhCCCHHHHHHHhcCCCCCC-------C-------C--CccCCCCCcccChhHhHHHHHHHHHhCCCchhHHHHHHHHH
Q 017997 238 EATGANVSQVAFAVGTDSRIG-------P-------K--FLNASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIK 301 (362)
Q Consensus 238 ~~~g~d~~~v~~~~~~~~~i~-------~-------~--~~~~g~g~gg~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~~ 301 (362)
++.|+|++.+.++++..+.-+ + . .-++.++|....+.||+.+..+.|++.|++ .|+.+.+.+
T Consensus 195 ~~~Gld~~~~~~vl~~~~~~s~~~~~~~p~~~~~~~~~~~~~~~~~f~~~l~~KDl~l~~~~A~~~g~~--~p~~~~a~~ 272 (300)
T 3obb_A 195 VANGLEAKVLAEIMRRSSGGNWALEVYNPWPGVMENAPASRDYSGGFMAQLMAKDLGLAQEAAQASASS--TPMGSLALS 272 (300)
T ss_dssp HHTTCCHHHHHHHHHTSTTCCHHHHHCCCSTTTSTTSGGGGTTCSSSBHHHHHHHHHHHHHHHHHHTCC--CHHHHHHHH
T ss_pred HhcCCCHHHHHHHHHhCcccchHHHhhccccchhhhccccccCCccchHHHHHHHHHHHHHHHHHcCCC--ChHHHHHHH
Confidence 999999999999987643110 0 0 012346788888999999999999999999 787776654
Q ss_pred H
Q 017997 302 I 302 (362)
Q Consensus 302 ~ 302 (362)
.
T Consensus 273 ~ 273 (300)
T 3obb_A 273 L 273 (300)
T ss_dssp H
T ss_pred H
Confidence 3
No 16
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=100.00 E-value=2.5e-32 Score=254.31 Aligned_cols=250 Identities=16% Similarity=0.166 Sum_probs=198.2
Q ss_pred eEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcEE
Q 017997 3 KICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADIV 82 (362)
Q Consensus 3 kI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDvV 82 (362)
||+|||+|+||.+||.+|+++ ||+|++|||++++++.+.+ ...+..+++.++++++|+|
T Consensus 7 kIgfIGLG~MG~~mA~~L~~~--G~~V~v~dr~~~~~~~l~~-------------------~G~~~~~s~~e~~~~~dvv 65 (297)
T 4gbj_A 7 KIAFLGLGNLGTPIAEILLEA--GYELVVWNRTASKAEPLTK-------------------LGATVVENAIDAITPGGIV 65 (297)
T ss_dssp EEEEECCSTTHHHHHHHHHHT--TCEEEEC-------CTTTT-------------------TTCEECSSGGGGCCTTCEE
T ss_pred cEEEEecHHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHH-------------------cCCeEeCCHHHHHhcCCce
Confidence 899999999999999999999 9999999999998877654 2356778899999999999
Q ss_pred EEeccCCCCCCCCCCCCCCChHHHHHHH-HHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhccCCCceEEeeCCccccc
Q 017997 83 FVSVNTPTKTQGLGAGKAADLTYWESAA-RVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEFLAE 161 (362)
Q Consensus 83 ii~vptp~~~~g~~~~~~~d~~~l~~~~-~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~~~~ 161 (362)
|+|+|++. .+++++ ..+.+.+++++++|++||+.|.+++++.+.+.+.+ +.++.+|....+
T Consensus 66 i~~l~~~~--------------~~~~v~~~~~~~~~~~~~iiid~sT~~p~~~~~~~~~~~~~g----~~~ldapVsGg~ 127 (297)
T 4gbj_A 66 FSVLADDA--------------AVEELFSMELVEKLGKDGVHVSMSTISPETSRQLAQVHEWYG----AHYVGAPIFARP 127 (297)
T ss_dssp EECCSSHH--------------HHHHHSCHHHHHHHCTTCEEEECSCCCHHHHHHHHHHHHHTT----CEEEECCEECCH
T ss_pred eeeccchh--------------hHHHHHHHHHHhhcCCCeEEEECCCCChHHHHHHHHHHHhcC----CceecCCcCCCc
Confidence 99998642 233333 45778889999999999999999999988887753 456889988777
Q ss_pred CccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCcEEeC-ChhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHh
Q 017997 162 GTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTT-NLWSAELSKLAANAFLAQRISSVNAMSALCEAT 240 (362)
Q Consensus 162 g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~~~~ 240 (362)
..+..+.. .+++|++ +++.++++++|+.++. ..++.+ +++.++.+|+++|.+.+.+++.++|...++++.
T Consensus 128 ~~a~~g~l---~im~gG~-----~~~~~~~~~~l~~~g~-~i~~~g~~~G~g~~~Kl~~N~~~~~~~~~~aEa~~la~~~ 198 (297)
T 4gbj_A 128 EAVRAKVG---NICLSGN-----AGAKERIKPIVENFVK-GVFDFGDDPGAANVIKLAGNFMIACSLEMMGEAFTMAEKN 198 (297)
T ss_dssp HHHHHTCC---EEEEEEC-----HHHHHHHHHHHHTTCS-EEEECCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cccccccc---eeecccc-----hhHHHHHHHHHHHhhC-CeEEecCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 66654433 4778887 7899999999999973 345566 579999999999999999999999999999999
Q ss_pred CCCHHHHHHHhcCCCCCCCC-------Cc--cC-CCCCcccChhHhHHHHHHHHHhCCCchhHHHHHHHHHH
Q 017997 241 GANVSQVAFAVGTDSRIGPK-------FL--NA-SVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIKI 302 (362)
Q Consensus 241 g~d~~~v~~~~~~~~~i~~~-------~~--~~-g~g~gg~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~~~ 302 (362)
|+|+++++++++..+.-++. .. ++ .+||.-..+.||+.+.++.|++.|++ .|+.+.+.+.
T Consensus 199 Gld~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~p~~f~~~l~~KDl~l~~~~A~~~g~~--~p~~~~~~~~ 268 (297)
T 4gbj_A 199 GISRQSIYEMLTSTLFAAPIFQNYGKLVASNTYEPVAFRFPLGLKDINLTLQTASDVNAP--MPFADIIRNR 268 (297)
T ss_dssp TCCHHHHHHHHHTTTTCSHHHHHHHHHHHHTCCCSCSSBHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHHH
T ss_pred CCCHHHHHHHHHhhcccCchhhccCccccCCCCCCccchhHHHHHHHHHHHHHHHHhCCC--ChHHHHHHHH
Confidence 99999999999876421110 00 12 24788888999999999999999999 7887766553
No 17
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=100.00 E-value=2.5e-32 Score=253.41 Aligned_cols=254 Identities=16% Similarity=0.121 Sum_probs=206.7
Q ss_pred CceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCc
Q 017997 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (362)
.|||+|||+|+||.++|..|+++ ||+|++||+++++++.+.+. ++..+++++++++++|
T Consensus 1 s~~i~iIG~G~mG~~~a~~l~~~--G~~V~~~dr~~~~~~~~~~~-------------------g~~~~~~~~~~~~~aD 59 (287)
T 3pef_A 1 SQKFGFIGLGIMGSAMAKNLVKA--GCSVTIWNRSPEKAEELAAL-------------------GAERAATPCEVVESCP 59 (287)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSGGGGHHHHHT-------------------TCEECSSHHHHHHHCS
T ss_pred CCEEEEEeecHHHHHHHHHHHHC--CCeEEEEcCCHHHHHHHHHC-------------------CCeecCCHHHHHhcCC
Confidence 38999999999999999999999 99999999999999888753 3567789999899999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHH---HHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhccCCCceEEeeCCc
Q 017997 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAA---RVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPE 157 (362)
Q Consensus 81 vVii~vptp~~~~g~~~~~~~d~~~l~~~~---~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe 157 (362)
+||+|||+|. .+++++ +++.+.++++++|+++||++|.+.+.+.+.+++. |. .++.+|.
T Consensus 60 vvi~~vp~~~--------------~~~~v~~~~~~l~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~--g~--~~~~~pv 121 (287)
T 3pef_A 60 VTFAMLADPA--------------AAEEVCFGKHGVLEGIGEGRGYVDMSTVDPATSQRIGVAVVAK--GG--RFLEAPV 121 (287)
T ss_dssp EEEECCSSHH--------------HHHHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHT--TC--EEEECCE
T ss_pred EEEEEcCCHH--------------HHHHHHcCcchHhhcCCCCCEEEeCCCCCHHHHHHHHHHHHHh--CC--EEEECCC
Confidence 9999998642 456777 8888999999999999999999999888777664 22 3455786
Q ss_pred ccccCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCcEEeCChhHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 017997 158 FLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRISSVNAMSALC 237 (362)
Q Consensus 158 ~~~~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~ 237 (362)
...+..+..+ ...+++|++ +++.++++++|+.++. .+++.++++.+++.|+++|.+.+.++++++|+..+|
T Consensus 122 ~g~~~~a~~g---~l~~~~gg~-----~~~~~~~~~ll~~~g~-~~~~~g~~g~~~~~Kl~~N~~~~~~~~~~~E~~~l~ 192 (287)
T 3pef_A 122 SGSKKPAEDG---TLIILAAGD-----RNLYDEAMPGFEKMGK-KIIHLGDVGKGAEMKLVVNMVMGGMMACFCEGLALG 192 (287)
T ss_dssp ECCHHHHHHT---CEEEEEEEC-----HHHHHHHHHHHHHHEE-EEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHhcC---CEEEEEeCC-----HHHHHHHHHHHHHhCC-CeEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6555443222 114667775 6889999999999873 355667899999999999999999999999999999
Q ss_pred HHhCCCHHHHHHHhcCCCCCCC-------CCc--cCCCCCcccChhHhHHHHHHHHHhCCCchhHHHHHHHHHHHH
Q 017997 238 EATGANVSQVAFAVGTDSRIGP-------KFL--NASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIKIND 304 (362)
Q Consensus 238 ~~~g~d~~~v~~~~~~~~~i~~-------~~~--~~g~g~gg~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~~~N~ 304 (362)
++.|+|++++.++++..+..++ .++ .+.+||++.|++||+.++.+.|++.|++ .|+++++.+.-+
T Consensus 193 ~~~G~d~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~g~~--~p~~~~~~~~~~ 266 (287)
T 3pef_A 193 EKAGLATDAILDVIGAGAMANPMFALKGGLIRDRNFAPAFPLKHMQKDLRLAVALGDRVGQP--LVASAAANELFK 266 (287)
T ss_dssp HHTTCCHHHHHHHHHHSTTCCHHHHHHHHHHHTTCCCCSSBHHHHHHHHHHHHHHHHHHTCC--CHHHHHHHHHHH
T ss_pred HHcCCCHHHHHHHHHhcccccHHHHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHcCCC--ChHHHHHHHHHH
Confidence 9999999999999986531111 111 2357899999999999999999999999 788887665543
No 18
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=100.00 E-value=2.1e-32 Score=254.01 Aligned_cols=254 Identities=17% Similarity=0.156 Sum_probs=204.7
Q ss_pred CceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCc
Q 017997 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (362)
||||+|||+|+||.++|..|+++ ||+|++||+++++++.+.+. ++..+++++++++++|
T Consensus 1 M~~I~iiG~G~mG~~~a~~l~~~--G~~V~~~dr~~~~~~~~~~~-------------------g~~~~~~~~~~~~~ad 59 (287)
T 3pdu_A 1 MTTYGFLGLGIMGGPMAANLVRA--GFDVTVWNRNPAKCAPLVAL-------------------GARQASSPAEVCAACD 59 (287)
T ss_dssp CCCEEEECCSTTHHHHHHHHHHH--TCCEEEECSSGGGGHHHHHH-------------------TCEECSCHHHHHHHCS
T ss_pred CCeEEEEccCHHHHHHHHHHHHC--CCeEEEEcCCHHHHHHHHHC-------------------CCeecCCHHHHHHcCC
Confidence 78999999999999999999999 99999999999998887652 2567788999899999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHH---HHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhccCCCceEEeeCCc
Q 017997 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAA---RVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPE 157 (362)
Q Consensus 81 vVii~vptp~~~~g~~~~~~~d~~~l~~~~---~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe 157 (362)
+||+|||++. .+++++ +++.+.++++++|+++||++|.+.+.+.+.+++. |. .++.+|.
T Consensus 60 vvi~~v~~~~--------------~~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~--g~--~~~~~pv 121 (287)
T 3pdu_A 60 ITIAMLADPA--------------AAREVCFGANGVLEGIGGGRGYIDMSTVDDETSTAIGAAVTAR--GG--RFLEAPV 121 (287)
T ss_dssp EEEECCSSHH--------------HHHHHHHSTTCGGGTCCTTCEEEECSCCCHHHHHHHHHHHHHT--TC--EEEECCE
T ss_pred EEEEEcCCHH--------------HHHHHHcCchhhhhcccCCCEEEECCCCCHHHHHHHHHHHHHc--CC--EEEECCc
Confidence 9999998642 356666 7788888999999999999999998888777664 22 3455675
Q ss_pred ccccCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCcEEeCChhHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 017997 158 FLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRISSVNAMSALC 237 (362)
Q Consensus 158 ~~~~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~ 237 (362)
...+..+..+. ..+++|++ ++..++++++|+.++. .+++.++++.+++.|+++|.+.+.++++++|+..+|
T Consensus 122 ~g~~~~a~~g~---l~~~~gg~-----~~~~~~~~~ll~~~g~-~~~~~g~~g~~~~~Kl~~N~~~~~~~~~~~Ea~~l~ 192 (287)
T 3pdu_A 122 SGTKKPAEDGT---LIILAAGD-----QSLFTDAGPAFAALGK-KCLHLGEVGQGARMKLVVNMIMGQMMTALGEGMALG 192 (287)
T ss_dssp ECCHHHHHHTC---EEEEEEEC-----HHHHHHTHHHHHHHEE-EEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHhcCC---EEEEEeCC-----HHHHHHHHHHHHHhCC-CEEEcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55443332221 14667775 7889999999999873 345567899999999999999999999999999999
Q ss_pred HHhCCCHHHHHHHhcCCCCCCC-------CCc--cCCCCCcccChhHhHHHHHHHHHhCCCchhHHHHHHHHHHHH
Q 017997 238 EATGANVSQVAFAVGTDSRIGP-------KFL--NASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIKIND 304 (362)
Q Consensus 238 ~~~g~d~~~v~~~~~~~~~i~~-------~~~--~~g~g~gg~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~~~N~ 304 (362)
++.|+|++++.++++..+..++ .++ .+.+||+..|++||..++.+.+++.|++ .|+.+++.+.-+
T Consensus 193 ~~~G~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~g~~--~p~~~~~~~~~~ 266 (287)
T 3pdu_A 193 RNCGLDGGQLLEVLDAGAMANPMFKGKGQMLLSGEFPTSFPLKHMQKDLRLAVELGDRLGQP--LHGAATANESFK 266 (287)
T ss_dssp HHTTCCHHHHHHHHHHSTTCCHHHHHHHHHHHHTCCCCSSBHHHHHHHHHHHHHHHHHHTCC--CHHHHHHHHHHH
T ss_pred HHcCCCHHHHHHHHHhccccChHHHhhccccccCCCCCCCcHHHHHHHHHHHHHHHHHcCCC--ChHHHHHHHHHH
Confidence 9999999999999987542111 111 2357899999999999999999999999 788887665543
No 19
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=100.00 E-value=8.9e-32 Score=251.64 Aligned_cols=254 Identities=14% Similarity=0.100 Sum_probs=202.1
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcE
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (362)
|||+|||+|+||.++|..|+++ ||+|++||+++++++.+.+. +...++++++++++++|+
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~--G~~V~~~dr~~~~~~~~~~~------------------g~~~~~~~~~e~~~~aDv 67 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRA--GLSTWGADLNPQACANLLAE------------------GACGAAASAREFAGVVDA 67 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHT------------------TCSEEESSSTTTTTTCSE
T ss_pred CeEEEECCCHHHHHHHHHHHHC--CCeEEEEECCHHHHHHHHHc------------------CCccccCCHHHHHhcCCE
Confidence 7899999999999999999999 99999999999999988763 112236778888899999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHH---HHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhccCCCceEEeeCCcc
Q 017997 82 VFVSVNTPTKTQGLGAGKAADLTYWESAA---RVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEF 158 (362)
Q Consensus 82 Vii~vptp~~~~g~~~~~~~d~~~l~~~~---~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~ 158 (362)
||+|||++. .++.++ +++.+.++++++|++.||++|.+.+.+.+.+++. |. .++.+|..
T Consensus 68 vi~~vp~~~--------------~~~~v~~~~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~--g~--~~~~~pv~ 129 (303)
T 3g0o_A 68 LVILVVNAA--------------QVRQVLFGEDGVAHLMKPGSAVMVSSTISSADAQEIAAALTAL--NL--NMLDAPVS 129 (303)
T ss_dssp EEECCSSHH--------------HHHHHHC--CCCGGGSCTTCEEEECSCCCHHHHHHHHHHHHTT--TC--EEEECCEE
T ss_pred EEEECCCHH--------------HHHHHHhChhhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHc--CC--eEEeCCCC
Confidence 999998642 345665 6778889999999999999999998888777664 22 33457765
Q ss_pred cccCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCcEEeCC-hhHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 017997 159 LAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTN-LWSAELSKLAANAFLAQRISSVNAMSALC 237 (362)
Q Consensus 159 ~~~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~ 237 (362)
..+..+..+ ...+++|++ ++..++++++|+.++. .+++..+ ++.+++.|+++|.+.++++++++|+..+|
T Consensus 130 g~~~~a~~g---~l~~~~gg~-----~~~~~~~~~ll~~~g~-~~~~~~~~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~ 200 (303)
T 3g0o_A 130 GGAVKAAQG---EMTVMASGS-----EAAFTRLKPVLDAVAS-NVYRISDTPGAGSTVKIIHQLLAGVHIAAAAEAMALA 200 (303)
T ss_dssp SCHHHHHTT---CEEEEEECC-----HHHHHHHHHHHHHHEE-EEEEEESSTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CChhhhhcC---CeEEEeCCC-----HHHHHHHHHHHHHHCC-CEEECCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555433222 114667765 7889999999999873 3455665 89999999999999999999999999999
Q ss_pred HHhCCCHHHHHHHhcCCCCCCC-------CCc--cCCCCCcccChhHhHHHHHHHHHhCCCchhHHHHHHHHHHHH
Q 017997 238 EATGANVSQVAFAVGTDSRIGP-------KFL--NASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIKIND 304 (362)
Q Consensus 238 ~~~g~d~~~v~~~~~~~~~i~~-------~~~--~~g~g~gg~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~~~N~ 304 (362)
++.|+|++++.++++.....++ .++ .+.+||+..|++||+.++++.|++.|++ .|+.+++.+.-+
T Consensus 201 ~~~G~d~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~kD~~~~~~~a~~~g~~--~p~~~~~~~~~~ 274 (303)
T 3g0o_A 201 ARAGIPLDVMYDVVTHAAGNSWMFENRMQHVVDGDYTPRSAVDIFVKDLGLVADTAKALRFP--LPLASTALNMFT 274 (303)
T ss_dssp HHTTCCHHHHHHHHTTSTTCCHHHHHHHHHHHTTCCCCSSBHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHHHHH
T ss_pred HHcCCCHHHHHHHHHhcccCCHHHHhhhHHHhcCCCCCCCchHHHHHHHHHHHHHHHHcCCC--ChHHHHHHHHHH
Confidence 9999999999999987531111 111 2357899999999999999999999999 788887665543
No 20
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=99.98 E-value=3.2e-31 Score=247.64 Aligned_cols=253 Identities=17% Similarity=0.170 Sum_probs=202.2
Q ss_pred CceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCc
Q 017997 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (362)
||||+|||+|+||.++|..|+++ ||+|++||+++++++.+.+. .+..+++++++++++|
T Consensus 3 m~~I~iiG~G~mG~~~a~~l~~~--G~~V~~~d~~~~~~~~~~~~-------------------g~~~~~~~~~~~~~aD 61 (302)
T 2h78_A 3 MKQIAFIGLGHMGAPMATNLLKA--GYLLNVFDLVQSAVDGLVAA-------------------GASAARSARDAVQGAD 61 (302)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHT--TCEEEEECSSHHHHHHHHHT-------------------TCEECSSHHHHHTTCS
T ss_pred CCEEEEEeecHHHHHHHHHHHhC--CCeEEEEcCCHHHHHHHHHC-------------------CCeEcCCHHHHHhCCC
Confidence 78999999999999999999999 99999999999999988752 3567788888899999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHH---HHHhhcCCCCEEEEeeCCccccHHHHHHHHHhccCCCceEEeeCCc
Q 017997 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAAR---VIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPE 157 (362)
Q Consensus 81 vVii~vptp~~~~g~~~~~~~d~~~l~~~~~---~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe 157 (362)
+||+|||++. .+++++. ++.+.++++++|+++||+.+.+++.+.+.+++. |.. ++.+|.
T Consensus 62 vvi~~vp~~~--------------~~~~v~~~~~~~~~~l~~~~~vi~~st~~~~~~~~l~~~~~~~--g~~--~~~~pv 123 (302)
T 2h78_A 62 VVISMLPASQ--------------HVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARER--GLA--MLDAPV 123 (302)
T ss_dssp EEEECCSCHH--------------HHHHHHHSSSCGGGSSCSSCEEEECSCCCHHHHHHHHHHHHHT--TCC--EEECCE
T ss_pred eEEEECCCHH--------------HHHHHHcCchhHHhcCCCCcEEEECCCCCHHHHHHHHHHHHHc--CCE--EEEEEc
Confidence 9999998642 4567776 788889999999999999999988888777664 223 345675
Q ss_pred ccccCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCcEEeCChhHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 017997 158 FLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRISSVNAMSALC 237 (362)
Q Consensus 158 ~~~~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~ 237 (362)
...+..+.. .. ..+++|++ ++..+.++++|+.++. .+++.++.+.+++.|+++|.+.+.++++++|+..+|
T Consensus 124 ~~~~~~~~~--g~-l~~~~~g~-----~~~~~~~~~ll~~~g~-~~~~~~~~~~~~~~Kl~~n~~~~~~~~~~~Ea~~l~ 194 (302)
T 2h78_A 124 SGGTAGAAA--GT-LTFMVGGD-----AEALEKARPLFEAMGR-NIFHAGPDGAGQVAKVCNNQLLAVLMIGTAEAMALG 194 (302)
T ss_dssp ESCHHHHHH--TC-EEEEEESC-----HHHHHHHHHHHHHHEE-EEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCChhhHhc--CC-ceEEeCCC-----HHHHHHHHHHHHHhCC-CeEEcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 443322211 11 13566764 7889999999999873 455667899999999999999999999999999999
Q ss_pred HHhCCCHHHHHHHhcCCCCCC-------C-------CCc--cCCCCCcccChhHhHHHHHHHHHhCCCchhHHHHHHHHH
Q 017997 238 EATGANVSQVAFAVGTDSRIG-------P-------KFL--NASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIK 301 (362)
Q Consensus 238 ~~~g~d~~~v~~~~~~~~~i~-------~-------~~~--~~g~g~gg~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~~ 301 (362)
++.|+|++++.++++..+..+ + .++ .+.+||+..|++||+.++++.|++.|++ .|+.+.+.+
T Consensus 195 ~~~G~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~kD~~~~~~~a~~~g~~--~p~~~~~~~ 272 (302)
T 2h78_A 195 VANGLEAKVLAEIMRRSSGGNWALEVYNPWPGVMENAPASRDYSGGFMAQLMAKDLGLAQEAAQASASS--TPMGSLALS 272 (302)
T ss_dssp HHTTCCHHHHHHHHHTSTTCCHHHHHCCCSTTTSTTSGGGGTTCSSSBHHHHHHHHHHHHHHHHHHTCC--CHHHHHHHH
T ss_pred HHcCCCHHHHHHHHHcCCCCCHHHHHhCCCcccccccccCCCCCCCCcHHHHHHHHHHHHHHHHHcCCC--ChHHHHHHH
Confidence 999999999999998754211 1 111 2346899999999999999999999999 787776654
Q ss_pred HH
Q 017997 302 IN 303 (362)
Q Consensus 302 ~N 303 (362)
.-
T Consensus 273 ~~ 274 (302)
T 2h78_A 273 LY 274 (302)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 21
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=99.97 E-value=1.4e-29 Score=238.09 Aligned_cols=242 Identities=13% Similarity=0.086 Sum_probs=181.1
Q ss_pred CceEEEEcCChhHHHHHHHHHHcCCC-CeEEEEeCCH-------HHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEec-C
Q 017997 1 MVKICCIGAGYVGGPTMAVIALKCPS-IEVAVVDISV-------SRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFST-D 71 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~la~~~~G-~~V~~~d~~~-------~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~-d 71 (362)
+|||+|||+|+||.++|..|+++ | |+|++||+++ +..+.+.+ .+ + ++ +
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~--G~~~V~~~dr~~~~~~~~~~~~~~~~~------------------~g-~--~~~s 80 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGR--NAARLAAYDLRFNDPAASGALRARAAE------------------LG-V--EPLD 80 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT--TCSEEEEECGGGGCTTTHHHHHHHHHH------------------TT-C--EEES
T ss_pred CCeEEEECccHHHHHHHHHHHHc--CCCeEEEEeCCCccccchHHHHHHHHH------------------CC-C--CCCC
Confidence 37999999999999999999999 9 9999999997 34444332 12 2 44 6
Q ss_pred HHhhhcCCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhccCCCceE
Q 017997 72 VEKHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQ 151 (362)
Q Consensus 72 ~~~a~~~aDvVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~~~g~~~~ 151 (362)
+.+++++||+||+|||++. ..+.++++.+.++++++||+.||++|++++++.+.+++.+ ..|
T Consensus 81 ~~e~~~~aDvVi~avp~~~---------------~~~~~~~i~~~l~~~~ivv~~st~~p~~~~~~~~~l~~~g--~~~- 142 (317)
T 4ezb_A 81 DVAGIACADVVLSLVVGAA---------------TKAVAASAAPHLSDEAVFIDLNSVGPDTKALAAGAIATGK--GSF- 142 (317)
T ss_dssp SGGGGGGCSEEEECCCGGG---------------HHHHHHHHGGGCCTTCEEEECCSCCHHHHHHHHHHHHTSS--CEE-
T ss_pred HHHHHhcCCEEEEecCCHH---------------HHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcC--CeE-
Confidence 7778999999999998643 2345688999999999999999999999999988887642 222
Q ss_pred EeeCCcccccCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCcEEeCC-hhHHHHHHHHHhHHHHHHHHHH
Q 017997 152 ILSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTN-LWSAELSKLAANAFLAQRISSV 230 (362)
Q Consensus 152 v~~~Pe~~~~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~ae~~Kl~~N~~~~~~ia~~ 230 (362)
+.+|... |-.+..+ . ..+++|+++ + ++++++|+.++. ..++..+ ++.+++.|+++|.+++++++++
T Consensus 143 -~d~pv~g-~~~a~~g--~-l~i~vgg~~-----~--~~~~~ll~~~g~-~v~~~g~~~g~a~~~Kl~~N~~~~~~~~~~ 209 (317)
T 4ezb_A 143 -VEGAVMA-RVPPYAE--K-VPILVAGRR-----A--VEVAERLNALGM-NLEAVGETPGQASSLKMIRSVMIKGVEALL 209 (317)
T ss_dssp -EEEEECS-CSTTTGG--G-SEEEEESTT-----H--HHHHHHHHTTTC-EEEEEESSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred -EeccCCC-CchhhcC--C-EEEEEeCCh-----H--HHHHHHHHHhCC-CeEEeCCCcCHHHHHHHHHHHHHHHHHHHH
Confidence 3334322 1111111 2 247788772 2 789999999863 3455565 8999999999999999999999
Q ss_pred HHHHHHHHHhCCCHHHHHHHhcCCC-CCCC-----CCc--cCCCCCcccChhHhHHHHHHHHHhCCCchhHHHHHHHHHH
Q 017997 231 NAMSALCEATGANVSQVAFAVGTDS-RIGP-----KFL--NASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIKI 302 (362)
Q Consensus 231 nE~~~l~~~~g~d~~~v~~~~~~~~-~i~~-----~~~--~~g~g~gg~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~~~ 302 (362)
+|+..+|+++|+|+ ++++.+.... ...+ .++ .+.+||+ ++||+.++.+.|++.|++ .++++++.++
T Consensus 210 ~E~~~la~~~Gid~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~---~~KDl~~~~~~a~~~g~~--~pl~~~~~~~ 283 (317)
T 4ezb_A 210 IEALSSAERAGVTE-RILDSVQETFPGLDWRDVADYYLSRTFEHGAR---RVTEMTEAAETIESFGLN--APMSRAACET 283 (317)
T ss_dssp HHHHHHHHHTTCHH-HHHHHHHHHSTTSCHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHTTTCC--CHHHHHHHHH
T ss_pred HHHHHHHHHcCCCH-HHHHHHHhcCccccHHHhhhhhhcCCCCCCcc---hHHHHHHHHHHHHHcCCC--ChHHHHHHHH
Confidence 99999999999999 5666665432 1111 111 1224444 799999999999999999 8888877655
No 22
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=99.96 E-value=4.3e-29 Score=234.34 Aligned_cols=250 Identities=11% Similarity=0.054 Sum_probs=190.2
Q ss_pred CceEEEEcCChhHHHHHHHHHHcCCCC-eEEEEeCC--HHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhc
Q 017997 1 MVKICCIGAGYVGGPTMAVIALKCPSI-EVAVVDIS--VSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS 77 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~la~~~~G~-~V~~~d~~--~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~ 77 (362)
||||+|||+|+||.++|..|+++ || +|++||++ +++.+.+.+. ++..++++.++++
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~--G~~~V~~~dr~~~~~~~~~~~~~-------------------g~~~~~~~~e~~~ 82 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQA--GAIDMAAYDAASAESWRPRAEEL-------------------GVSCKASVAEVAG 82 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHH--SCCEEEEECSSCHHHHHHHHHHT-------------------TCEECSCHHHHHH
T ss_pred CCEEEEECccHHHHHHHHHHHHC--CCCeEEEEcCCCCHHHHHHHHHC-------------------CCEEeCCHHHHHh
Confidence 47999999999999999999999 99 99999997 6777776542 3567788888899
Q ss_pred CCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhccCCCceEEeeCCc
Q 017997 78 EADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPE 157 (362)
Q Consensus 78 ~aDvVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe 157 (362)
++|+||+|||++. ..++++++.+.++++++|++.||+.|++++.+.+.+.+...|.. ++.+|.
T Consensus 83 ~aDvVi~~vp~~~---------------~~~~~~~l~~~l~~~~ivvd~st~~~~~~~~~~~~~~~~~~g~~--~vd~pv 145 (312)
T 3qsg_A 83 ECDVIFSLVTAQA---------------ALEVAQQAGPHLCEGALYADFTSCSPAVKRAIGDVISRHRPSAQ--YAAVAV 145 (312)
T ss_dssp HCSEEEECSCTTT---------------HHHHHHHHGGGCCTTCEEEECCCCCHHHHHHHHHHHHHHCTTCE--EEEEEE
T ss_pred cCCEEEEecCchh---------------HHHHHHhhHhhcCCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCe--EEeccc
Confidence 9999999998653 23467889999999999999999999999988877766421222 234444
Q ss_pred ccccCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCcEEeCC-hhHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 017997 158 FLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTN-LWSAELSKLAANAFLAQRISSVNAMSAL 236 (362)
Q Consensus 158 ~~~~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~ae~~Kl~~N~~~~~~ia~~nE~~~l 236 (362)
...+..+ .+ ...+++|+.+ + ++++++|+.++. ..++..+ ++.+++.|+++|.+.+.++++++|+..+
T Consensus 146 ~g~~~~~-~g---~l~i~vgg~~-----~--~~~~~ll~~~g~-~~~~~g~~~g~a~~~Kl~~n~~~~~~~~~~~Ea~~l 213 (312)
T 3qsg_A 146 MSAVKPH-GH---RVPLVVDGDG-----A--RRFQAAFTLYGC-RIEVLDGEVGGAALLKMCRSAVLKGLEALFLEALAA 213 (312)
T ss_dssp CSCSTTT-GG---GSEEEEESTT-----H--HHHHHHHHTTTC-EEEECCSSTTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCchhh-cC---CEEEEecCCh-----H--HHHHHHHHHhCC-CeEEcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3322222 11 1257788772 2 889999999873 3445555 8999999999999999999999999999
Q ss_pred HHHhCCCHHHHHHHhcCCCC------CCCCCcc--CCCCCcccChhHhHHHHHHHHHhCCCchhHHHHHHHHHHHHHh
Q 017997 237 CEATGANVSQVAFAVGTDSR------IGPKFLN--ASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIKINDYQ 306 (362)
Q Consensus 237 ~~~~g~d~~~v~~~~~~~~~------i~~~~~~--~g~g~gg~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~~~N~~~ 306 (362)
|+++|+|+ ++++.++.... ++..++. +++||. ++||+.++++.+++.|++ .++++++.++-+..
T Consensus 214 a~~~Gld~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~---~~KDl~~~~~~a~~~g~~--~pl~~~~~~~~~~~ 285 (312)
T 3qsg_A 214 AEKMGLAD-RVLASLDASFPEHHLRDLALYLVERNLEHADR---RAHELGEVAATLCSVGVE--PLVAEAGYRRLTRV 285 (312)
T ss_dssp HHTTTCHH-HHHHHHHHHSGGGTHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHTTCC--CHHHHHHHHHHHHH
T ss_pred HHHcCCCH-HHHHHHHhcCCchhHHHhhhHhhcCCCCcccc---hHHHHHHHHHHHHHcCCC--cHHHHHHHHHHHHH
Confidence 99999999 68888875421 0111111 233443 489999999999999999 78888877766543
No 23
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=99.95 E-value=3.2e-27 Score=220.98 Aligned_cols=248 Identities=11% Similarity=0.082 Sum_probs=187.9
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcE
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (362)
|||+|||+|.||.++|..|++. ||+|++||+++++++.+.+. ....+++++++++++|+
T Consensus 10 ~~IgiIG~G~mG~~~A~~l~~~--G~~V~~~dr~~~~~~~~~~~-------------------g~~~~~~~~e~~~~aDv 68 (306)
T 3l6d_A 10 FDVSVIGLGAMGTIMAQVLLKQ--GKRVAIWNRSPGKAAALVAA-------------------GAHLCESVKAALSASPA 68 (306)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSHHHHHHHHHH-------------------TCEECSSHHHHHHHSSE
T ss_pred CeEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHC-------------------CCeecCCHHHHHhcCCE
Confidence 6899999999999999999999 99999999999999887641 24667888888999999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHH--HHHhhcCCCCEEEEeeCCccccHHHHHHHHHhccCCCceEEeeCCccc
Q 017997 82 VFVSVNTPTKTQGLGAGKAADLTYWESAAR--VIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEFL 159 (362)
Q Consensus 82 Vii~vptp~~~~g~~~~~~~d~~~l~~~~~--~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~~ 159 (362)
||+|||++. .+++++. .+.. +.++++|++.||+.|.+++.+.+.+.+. |.. ++.+|...
T Consensus 69 Vi~~vp~~~--------------~~~~v~~~~~l~~-~~~g~ivid~st~~~~~~~~l~~~~~~~--g~~--~vdapv~g 129 (306)
T 3l6d_A 69 TIFVLLDNH--------------ATHEVLGMPGVAR-ALAHRTIVDYTTNAQDEGLALQGLVNQA--GGH--YVKGMIVA 129 (306)
T ss_dssp EEECCSSHH--------------HHHHHHTSTTHHH-HTTTCEEEECCCCCTTHHHHHHHHHHHT--TCE--EEEEEEES
T ss_pred EEEEeCCHH--------------HHHHHhcccchhh-ccCCCEEEECCCCCHHHHHHHHHHHHHc--CCe--EEeccccc
Confidence 999998642 2455554 5544 4689999999999999999888777664 222 34455443
Q ss_pred ccCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCcEEe--CC-hhHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 017997 160 AEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILT--TN-LWSAELSKLAANAFLAQRISSVNAMSAL 236 (362)
Q Consensus 160 ~~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~-~~~ae~~Kl~~N~~~~~~ia~~nE~~~l 236 (362)
.+...-. .. ..+++|++ ++++++++++|+.++. ..+++ ++ ++.+++.| .+.+.++++++|...+
T Consensus 130 ~~~~~~~--~~-~~i~~gg~-----~~~~~~~~~ll~~lg~-~~~~~~~g~~~g~g~~~k----~~~~~~~~~~~Ea~~l 196 (306)
T 3l6d_A 130 YPRNVGH--RE-SHSIHTGD-----REAFEQHRALLEGLAG-HTVFLPWDEALAFATVLH----AHAFAAMVTFFEAVGA 196 (306)
T ss_dssp CGGGTTC--TT-CEEEEEEC-----HHHHHHHHHHHHTTCS-EEEECCHHHHHHHHHHHH----HHHHHHHHHHHHHHHH
T ss_pred CcccccC--Cc-eEEEEcCC-----HHHHHHHHHHHHHhcC-CEEEecCCCCccHHHHHH----HHHHHHHHHHHHHHHH
Confidence 3222111 11 24778876 7899999999999862 35555 53 78999999 4556789999999999
Q ss_pred HHHhCCCHHHHHHHhcCCC-----C----CCCCCc--cCCC-CCcccChhHhHHHHHHHHHhCCCchhHHHHHHHHHHHH
Q 017997 237 CEATGANVSQVAFAVGTDS-----R----IGPKFL--NASV-GFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIKIND 304 (362)
Q Consensus 237 ~~~~g~d~~~v~~~~~~~~-----~----i~~~~~--~~g~-g~gg~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~~~N~ 304 (362)
+++.|+|++++.++++... + .++.++ .+.+ +|...|+.||+.++++.+++.|++ .++.+++.+.-+
T Consensus 197 a~~~Gld~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~KDl~~~~~~a~~~g~~--~p~~~~~~~~~~ 274 (306)
T 3l6d_A 197 GDRFGLPVSKTARLLLETSRFFVADALEEAVRRLETQDFKGDQARLDVHADAFAHIAQSLHAQGVW--TPVFDAVCQVVQ 274 (306)
T ss_dssp HHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCTTSSBHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHHHHH
T ss_pred HHHcCCCHHHHHHHHHHhhhhcccHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHcCCC--chHHHHHHHHHH
Confidence 9999999999999887542 0 011111 1223 467899999999999999999999 788887766543
No 24
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=99.95 E-value=1.7e-26 Score=215.18 Aligned_cols=252 Identities=18% Similarity=0.238 Sum_probs=196.1
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcE
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (362)
|||+|||+|.||..+|..|++. |++|++||+++++++.+++. .+..+++++++++++|+
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~~~~~~~~~~~~~-------------------g~~~~~~~~~~~~~~D~ 64 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKA--GYSLVVSDRNPEAIADVIAA-------------------GAETASTAKAIAEQCDV 64 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHT-------------------TCEECSSHHHHHHHCSE
T ss_pred ceEEEECchHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHC-------------------CCeecCCHHHHHhCCCE
Confidence 6999999999999999999998 99999999999999888752 24566788888899999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHH---HHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhccCCCceEEeeCCcc
Q 017997 82 VFVSVNTPTKTQGLGAGKAADLTYWESAA---RVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEF 158 (362)
Q Consensus 82 Vii~vptp~~~~g~~~~~~~d~~~l~~~~---~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~ 158 (362)
||+|+|++. .+..++ +++.+.++++++|++.|+..+.+.+.+.+.+++. |. .++.+|..
T Consensus 65 vi~~v~~~~--------------~~~~~~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~--g~--~~~~~pv~ 126 (299)
T 1vpd_A 65 IITMLPNSP--------------HVKEVALGENGIIEGAKPGTVLIDMSSIAPLASREISDALKAK--GV--EMLDAPVS 126 (299)
T ss_dssp EEECCSSHH--------------HHHHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHTT--TC--EEEECCEE
T ss_pred EEEECCCHH--------------HHHHHHhCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHc--CC--eEEEecCC
Confidence 999998542 345666 6778888999999999998888788887777654 22 33455654
Q ss_pred cccCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCcEEeCChhHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Q 017997 159 LAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRISSVNAMSALCE 238 (362)
Q Consensus 159 ~~~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~~ 238 (362)
..+..+... ...+++|++ ++..+.++++|+.++. ..++..+.+.+.+.|++.|.+.++.+++++|+..+++
T Consensus 127 ~~~~~~~~~---~~~~~~~~~-----~~~~~~~~~ll~~~g~-~~~~~~~~~~~~~~Kl~~n~~~~~~~~~~~Ea~~l~~ 197 (299)
T 1vpd_A 127 GGEPKAIDG---TLSVMVGGD-----KAIFDKYYDLMKAMAG-SVVHTGDIGAGNVTKLANQVIVALNIAAMSEALTLAT 197 (299)
T ss_dssp SHHHHHHHT---CEEEEEESC-----HHHHHHHHHHHHTTEE-EEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHhHHhcC---CEEEEeCCC-----HHHHHHHHHHHHHHcC-CeEEeCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 433333221 124666753 6789999999999862 3445568899999999999999999999999999999
Q ss_pred HhCCCHHHHHHHhcCCCCC-------CCCCc--cCCCCCcccChhHhHHHHHHHHHhCCCchhHHHHHHHHHHH
Q 017997 239 ATGANVSQVAFAVGTDSRI-------GPKFL--NASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIKIN 303 (362)
Q Consensus 239 ~~g~d~~~v~~~~~~~~~i-------~~~~~--~~g~g~gg~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~~~N 303 (362)
+.|+|++++.+++.....- .+..+ ...+|+...++.||..++.+.+++.|++ .|+.+++.++-
T Consensus 198 ~~G~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~g~~~~~~~kd~~~~~~~a~~~gv~--~p~~~~~~~~~ 269 (299)
T 1vpd_A 198 KAGVNPDLVYQAIRGGLAGSTVLDAKAPMVMDRNFKPGFRIDLHIKDLANALDTSHGVGAQ--LPLTAAVMEMM 269 (299)
T ss_dssp HTTCCHHHHHHHHTTSTTCCHHHHHHHHHHHTTCCCCSSBHHHHHHHHHHHHHHHHHHTCC--CHHHHHHHHHH
T ss_pred HcCCCHHHHHHHHHccCCCCHHHHHhhhHhhcCCCCCCCChHHHHHHHHHHHHHHHHcCCC--ChHHHHHHHHH
Confidence 9999999999998764310 00111 1246788889999999999999999999 78777665543
No 25
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=99.95 E-value=2.3e-26 Score=218.90 Aligned_cols=264 Identities=16% Similarity=0.204 Sum_probs=200.3
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCC--
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEA-- 79 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~a-- 79 (362)
|||+|||+|.||.++|.+|+++ ||+|++||+++++++.+.+. ++..+++++++++.+
T Consensus 23 mkIgiIGlG~mG~~~A~~L~~~--G~~V~v~dr~~~~~~~l~~~-------------------g~~~~~s~~e~~~~a~~ 81 (358)
T 4e21_A 23 MQIGMIGLGRMGADMVRRLRKG--GHECVVYDLNVNAVQALERE-------------------GIAGARSIEEFCAKLVK 81 (358)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTT-------------------TCBCCSSHHHHHHHSCS
T ss_pred CEEEEECchHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHC-------------------CCEEeCCHHHHHhcCCC
Confidence 7999999999999999999999 99999999999999988763 245567888888888
Q ss_pred -cEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhccCCCceEEeeCCcc
Q 017997 80 -DIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEF 158 (362)
Q Consensus 80 -DvVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~ 158 (362)
|+||+|||++ .+.++++++.+.++++++||+.||+.|.+++++.+.+.+. |. .++.+|..
T Consensus 82 ~DvVi~~vp~~---------------~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~--g~--~~vdapVs 142 (358)
T 4e21_A 82 PRVVWLMVPAA---------------VVDSMLQRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQ--GI--TYVDVGTS 142 (358)
T ss_dssp SCEEEECSCGG---------------GHHHHHHHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTT--TC--EEEEEEEE
T ss_pred CCEEEEeCCHH---------------HHHHHHHHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHC--CC--EEEeCCCC
Confidence 9999999854 2577889999999999999999999999998887777664 22 33455654
Q ss_pred cccCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCC-------------------CcEEeCChhHHHHHHHHH
Q 017997 159 LAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPE-------------------DRILTTNLWSAELSKLAA 219 (362)
Q Consensus 159 ~~~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~-------------------~~~~~~~~~~ae~~Kl~~ 219 (362)
..+..+..+ + .+++|++ ++++++++++|+.++.+ ..+++++.+.++++|+++
T Consensus 143 Gg~~~a~~G---~-~im~GG~-----~~a~~~~~~ll~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~G~~G~g~~~Kl~~ 213 (358)
T 4e21_A 143 GGIFGLERG---Y-CLMIGGE-----KQAVERLDPVFRTLAPGIGAAPRTPGREKREGTAELGYLHCGPSGAGHFVKMVH 213 (358)
T ss_dssp CGGGHHHHC---C-EEEEESC-----HHHHHHTHHHHHHHSCCGGGSCCCTTGGGCCSSGGGTEEEEESTTHHHHHHHHH
T ss_pred CCHHHHhcC---C-eeeecCC-----HHHHHHHHHHHHHhccccccCcccccccccccccccceEEECCccHHHHHHHHH
Confidence 444333332 1 5888986 78999999999998721 345677899999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHh------------------------CCCHHHHHHHhcCCCCCCCCCc---------cCCC
Q 017997 220 NAFLAQRISSVNAMSALCEAT------------------------GANVSQVAFAVGTDSRIGPKFL---------NASV 266 (362)
Q Consensus 220 N~~~~~~ia~~nE~~~l~~~~------------------------g~d~~~v~~~~~~~~~i~~~~~---------~~g~ 266 (362)
|.+.+.++++++|...++++. |+|+.++.+.++..+.+++.++ +|+.
T Consensus 214 n~l~~~~i~~~aE~~~la~~a~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~~~~~~g~~~~s~~l~~~~~~~~~~p~~ 293 (358)
T 4e21_A 214 NGIEYGLMAAYAEGLNILHHANAGKEGQGADAETAPLRNPDFYRYDLDLADITEVWRRGSVISSWLLDLSATALLDSPDL 293 (358)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCC--------------CGGGCCCCCCHHHHHHHHTTTSTTCBHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHHHHHHHhcccccccccccccccccccchhcccCCCHHHHHHHHhCccHHHHHHHHHHHHHHhhCCCh
Confidence 999999999999999999998 8999999999987654433222 2432
Q ss_pred -CCcccChhHhH---HHHHHHHHhCCCchhHHHHHHHHH-HHHHhH-HHHHHHHHHHh
Q 017997 267 -GFGGSCFQKDI---LNLVYICECNGLPEVAEYWKQVIK-INDYQK-SRFVNRVVASM 318 (362)
Q Consensus 267 -g~gg~cl~kD~---~~l~~~a~~~g~~~~~~~~~~~~~-~N~~~~-~~~~~~~~~~~ 318 (362)
.|.+. .||. +..+..|.+.|+| .|++.+++. -...+. +..+.++.+.+
T Consensus 294 ~~~~~~--~~d~g~~r~~~~~A~~~gvp--~p~~~~al~~~~~s~~~~~~~~~l~~a~ 347 (358)
T 4e21_A 294 QEFQGR--VSDSGEGRWTVAAAIDEGVP--AHVLSSALYERFSSRGEDDFANRLLSAM 347 (358)
T ss_dssp TTC--C--CCCCSHHHHHHHHHHHHTCC--CHHHHHHHHHHHHHTTTTHHHHHHHHHH
T ss_pred HHHHHH--HHhcCcHHHHHHHHHHcCCC--hHHHHHHHHHHHHHCCCcccHHHHHHHH
Confidence 24322 3444 6678889999999 788887652 222222 23344555544
No 26
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=99.95 E-value=1.2e-26 Score=215.62 Aligned_cols=253 Identities=18% Similarity=0.167 Sum_probs=195.4
Q ss_pred CceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCc
Q 017997 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (362)
||||+|||+|.||..+|..|++. |++|++|| ++++++.+.+. .+..+++++++++++|
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~-~~~~~~~~~~~-------------------g~~~~~~~~~~~~~~D 60 (295)
T 1yb4_A 3 AMKLGFIGLGIMGSPMAINLARA--GHQLHVTT-IGPVADELLSL-------------------GAVNVETARQVTEFAD 60 (295)
T ss_dssp -CEEEECCCSTTHHHHHHHHHHT--TCEEEECC-SSCCCHHHHTT-------------------TCBCCSSHHHHHHTCS
T ss_pred CCEEEEEccCHHHHHHHHHHHhC--CCEEEEEc-CHHHHHHHHHc-------------------CCcccCCHHHHHhcCC
Confidence 58999999999999999999998 99999999 98888877652 1334567788889999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHH---HHHhhcCCCCEEEEeeCCccccHHHHHHHHHhccCCCceEEeeCCc
Q 017997 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAAR---VIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPE 157 (362)
Q Consensus 81 vVii~vptp~~~~g~~~~~~~d~~~l~~~~~---~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe 157 (362)
+||+|+|.+. .+..++. ++.+.++++++|+..|+..+.+.+.+.+.+++. + +.+..+|.
T Consensus 61 ~vi~~vp~~~--------------~~~~v~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~--g--~~~~~~p~ 122 (295)
T 1yb4_A 61 IIFIMVPDTP--------------QVEDVLFGEHGCAKTSLQGKTIVDMSSISPIETKRFAQRVNEM--G--ADYLDAPV 122 (295)
T ss_dssp EEEECCSSHH--------------HHHHHHHSTTSSTTSCCTTEEEEECSCCCHHHHHHHHHHHHTT--T--EEEEECCE
T ss_pred EEEEECCCHH--------------HHHHHHhCchhHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHc--C--CeEEEccC
Confidence 9999998542 2455665 677778889999998988888888887777653 2 33456676
Q ss_pred ccccCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCcEEeCChhHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 017997 158 FLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRISSVNAMSALC 237 (362)
Q Consensus 158 ~~~~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~ 237 (362)
...+..+..+ . ..+++|++ ++..+.++++|+.++. ..++..+.+.+.+.|++.|.+.++.+++++|+..++
T Consensus 123 ~~~~~~a~~g--~-~~~~~~~~-----~~~~~~~~~ll~~~g~-~~~~~~~~~~~~~~Kl~~n~~~~~~~~~~~E~~~l~ 193 (295)
T 1yb4_A 123 SGGEIGAREG--T-LSIMVGGE-----QKVFDRVKPLFDILGK-NITLVGGNGDGQTCKVANQIIVALNIEAVSEALVFA 193 (295)
T ss_dssp ESHHHHHHHT--C-EEEEEESC-----HHHHHHHHHHHHHHEE-EEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHcC--C-eEEEECCC-----HHHHHHHHHHHHHhcC-CEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5544332221 1 13566763 6788999999999862 345567889999999999999999999999999999
Q ss_pred HHhCCCHHHHHHHhcCCCCCCC-------CCc--cCCCCCcccChhHhHHHHHHHHHhCCCchhHHHHHHHHHHHH
Q 017997 238 EATGANVSQVAFAVGTDSRIGP-------KFL--NASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIKIND 304 (362)
Q Consensus 238 ~~~g~d~~~v~~~~~~~~~i~~-------~~~--~~g~g~gg~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~~~N~ 304 (362)
++.|+|++++.+.+.....-.+ .++ ...+|+...++.||+.++++.+++.|++ .++.+++.++.+
T Consensus 194 ~~~G~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~~~~~~~kd~~~~~~~a~~~g~~--~p~~~~~~~~~~ 267 (295)
T 1yb4_A 194 SKAGADPVRVRQALMGGFASSRILEVHGERMINRTFEPGFKIALHQKDLNLALQSAKALALN--LPNTATCQELFN 267 (295)
T ss_dssp HHTTCCHHHHHHHHTSSSSCBHHHHHHHHHHHTTCCCCSSBHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHHHHH
T ss_pred HHcCCCHHHHHHHHHcCCCCCHHHHHhhHHHhcCCCCCCCchHHHHHHHHHHHHHHHHcCCC--ChHHHHHHHHHH
Confidence 9999999999999986541100 011 2346788899999999999999999999 788887776654
No 27
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=99.94 E-value=2.1e-25 Score=207.35 Aligned_cols=252 Identities=15% Similarity=0.169 Sum_probs=190.4
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcE
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (362)
|||+|||+|.||.++|..|++. |++|++||+++++++.+++. .++.+++++++++++|+
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~--g~~V~~~~~~~~~~~~~~~~-------------------g~~~~~~~~~~~~~~Dv 59 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKH--GYPLIIYDVFPDACKEFQDA-------------------GEQVVSSPADVAEKADR 59 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHT--TCCEEEECSSTHHHHHHHTT-------------------TCEECSSHHHHHHHCSE
T ss_pred CeEEEEeccHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHc-------------------CCeecCCHHHHHhcCCE
Confidence 7999999999999999999998 99999999999999888752 25567788888899999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHH---HHhhcCCCCEEEEeeCCccccHHHHHHHHHhccCCCceEEeeCCcc
Q 017997 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARV---IADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEF 158 (362)
Q Consensus 82 Vii~vptp~~~~g~~~~~~~d~~~l~~~~~~---i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~ 158 (362)
||+|+|.|. .+..++.+ +.+.++++++|+..|++++.+.+.+.+.+.+. +. .+..+|..
T Consensus 60 vi~~vp~~~--------------~~~~v~~~~~~~~~~l~~~~~vv~~s~~~~~~~~~~~~~~~~~--g~--~~~~~p~~ 121 (296)
T 2gf2_A 60 IITMLPTSI--------------NAIEAYSGANGILKKVKKGSLLIDSSTIDPAVSKELAKEVEKM--GA--VFMDAPVS 121 (296)
T ss_dssp EEECCSSHH--------------HHHHHHHSTTSGGGTCCTTCEEEECSCCCHHHHHHHHHHHHHT--TC--EEEECCEE
T ss_pred EEEeCCCHH--------------HHHHHHhCchhHHhcCCCCCEEEECCCCCHHHHHHHHHHHHHc--CC--EEEEcCCC
Confidence 999997542 34555554 34567889999888889998888777666653 22 33456755
Q ss_pred cccCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCcEEeCChhHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Q 017997 159 LAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRISSVNAMSALCE 238 (362)
Q Consensus 159 ~~~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~~ 238 (362)
..+..+... ...+++|++ ++..+.++++|+.++. ..+.....+.+.+.|+++|.++++.+++++|+..+++
T Consensus 122 ~g~~~a~~~---~~~~~~~~~-----~~~~~~v~~l~~~~g~-~~~~~~~~g~~~~~kl~~n~~~~~~~~~~~Ea~~~~~ 192 (296)
T 2gf2_A 122 GGVGAARSG---NLTFMVGGV-----EDEFAAAQELLGCMGS-NVVYCGAVGTGQAAKICNNMLLAISMIGTAEAMNLGI 192 (296)
T ss_dssp SHHHHHHHT---CEEEEEESC-----GGGHHHHHHHHTTTEE-EEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CChhHHhcC---cEEEEeCCC-----HHHHHHHHHHHHHHcC-CeEEeCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 443212111 113556654 5678899999999862 3445567788999999999999999999999999999
Q ss_pred HhCCCHHHHHHHhcCCCCC---------CCCCc-------cCCCCCcccChhHhHHHHHHHHHhCCCchhHHHHHHHHHH
Q 017997 239 ATGANVSQVAFAVGTDSRI---------GPKFL-------NASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIKI 302 (362)
Q Consensus 239 ~~g~d~~~v~~~~~~~~~i---------~~~~~-------~~g~g~gg~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~~~ 302 (362)
+.|+|++++.++++..... .+..+ +..+||...++.||..++.+.++++|++ .|+.+++.++
T Consensus 193 ~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~~~g~~~~~~~kd~~~~~~~a~~~gv~--~p~~~~~~~~ 270 (296)
T 2gf2_A 193 RLGLDPKLLAKILNMSSGRCWSSDTYNPVPGVMDGVPSANNYQGGFGTTLMAKDLGLAQDSATSTKSP--ILLGSLAHQI 270 (296)
T ss_dssp HTTCCHHHHHHHHHTSTTCBHHHHHSCSSTTTCSSSGGGGTTCSSSBHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHHH
T ss_pred HcCCCHHHHHHHHHhCcccCHHHHhcCCcccccccchhccCCCCCCchHHHHHHHHHHHHHHHHcCCC--ChHHHHHHHH
Confidence 9999999999988753210 00111 2235788889999999999999999999 7877766554
Q ss_pred H
Q 017997 303 N 303 (362)
Q Consensus 303 N 303 (362)
-
T Consensus 271 ~ 271 (296)
T 2gf2_A 271 Y 271 (296)
T ss_dssp H
T ss_pred H
Confidence 3
No 28
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=99.94 E-value=6.2e-26 Score=216.05 Aligned_cols=277 Identities=14% Similarity=0.124 Sum_probs=205.2
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHc-CCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCc
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNS-DQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~-~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (362)
|||+|||+|+||+++|..|+++ ||+|++||+++++++.+++ +..+.+.|+.. ...++++++|++++++++|
T Consensus 30 mkI~VIGaG~mG~alA~~La~~--G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~------l~~~i~~t~d~~ea~~~aD 101 (356)
T 3k96_A 30 HPIAILGAGSWGTALALVLARK--GQKVRLWSYESDHVDEMQAEGVNNRYLPNYP------FPETLKAYCDLKASLEGVT 101 (356)
T ss_dssp SCEEEECCSHHHHHHHHHHHTT--TCCEEEECSCHHHHHHHHHHSSBTTTBTTCC------CCTTEEEESCHHHHHTTCC
T ss_pred CeEEEECccHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHcCCCcccCCCCc------cCCCeEEECCHHHHHhcCC
Confidence 7999999999999999999999 9999999999999999986 44555556543 2356899999998899999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeC-CccccHHHHHHHHHhccCCCceEEeeCCccc
Q 017997 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKST-VPVKTAEAIEKILTHNSKGIKFQILSNPEFL 159 (362)
Q Consensus 81 vVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~ST-v~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~~ 159 (362)
+||+|||+. ++.++++++.++++++++|+..++ +.+++ +.+.+.+++..++..+.+.++|++.
T Consensus 102 vVilaVp~~---------------~~~~vl~~i~~~l~~~~ivvs~~kGi~~~t-~~~se~i~~~l~~~~~~vlsgP~~a 165 (356)
T 3k96_A 102 DILIVVPSF---------------AFHEVITRMKPLIDAKTRIAWGTKGLAKGS-RLLHEVVATELGQVPMAVISGPSLA 165 (356)
T ss_dssp EEEECCCHH---------------HHHHHHHHHGGGCCTTCEEEECCCSCBTTT-BCHHHHHHHHHCSCCEEEEESSCCH
T ss_pred EEEECCCHH---------------HHHHHHHHHHHhcCCCCEEEEEeCCCCcCc-cCHHHHHHHHcCCCCEEEEECccHH
Confidence 999999842 578899999999999998877666 78877 6666666554333456788999988
Q ss_pred ccCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCcEEeCChhHHHHHH-----------------HHHhHH
Q 017997 160 AEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSK-----------------LAANAF 222 (362)
Q Consensus 160 ~~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ae~~K-----------------l~~N~~ 222 (362)
.+... ..|..+++++.+ ++..+.++++|+..+ ...+...|+..+||.| +..|+.
T Consensus 166 ~ev~~----g~pt~~via~~~----~~~~~~v~~lf~~~~-~rv~~~~Di~g~e~~galkNviaia~G~~~gl~~g~N~~ 236 (356)
T 3k96_A 166 TEVAA----NLPTAVSLASNN----SQFSKDLIERLHGQR-FRVYKNDDMIGVELCGSVKNILAIATGISDGLKLGSNAR 236 (356)
T ss_dssp HHHHT----TCCEEEEEEESC----HHHHHHHHHHHCCSS-EEEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHH
T ss_pred HHHHc----CCCeEEEEecCC----HHHHHHHHHHhCCCC-eeEEEeCCHHHHHHHHHHHHHHHHHHHHHhhccCCchHH
Confidence 76543 456667788763 788999999999754 1244567999989875 456778
Q ss_pred HHHHHHHHHHHHHHHHHhCCCHHHHHHHhcCCC-------CCCCCCccCC----CCCc----------ccChhHhHHHHH
Q 017997 223 LAQRISSVNAMSALCEATGANVSQVAFAVGTDS-------RIGPKFLNAS----VGFG----------GSCFQKDILNLV 281 (362)
Q Consensus 223 ~~~~ia~~nE~~~l~~~~g~d~~~v~~~~~~~~-------~i~~~~~~~g----~g~g----------g~cl~kD~~~l~ 281 (362)
.++.+.+++|+.++|+++|+|++++.++.|... ..+.|+ ..| -|.. ----.++...+.
T Consensus 237 aal~~~~l~E~~~l~~a~G~~~~t~~gl~g~gDl~~tc~s~~sRN~-~~G~~l~~g~~~~~~~~~~~~~~eG~~t~~~~~ 315 (356)
T 3k96_A 237 AALITRGLTEMGRLVSVFGGKQETLTGLAGLGDLVLTCTDNQSRNR-RFGLALGEGVDKKEAQQAIGQAIEGLYNTDQVH 315 (356)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCHHHHTSTTTHHHHHHHHHCTTCHHH-HHHHHHHHTCCHHHHHHHHCSCCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCChHhhcccchhhHHHHhccCCCCccH-HHHHHHHCCCCHHHHHHHcCCccchHHHHHHHH
Confidence 899999999999999999999999886644211 111111 111 0100 012246778889
Q ss_pred HHHHhCCCchhHHHHHHHHHHH--HHhHHHHHHHH
Q 017997 282 YICECNGLPEVAEYWKQVIKIN--DYQKSRFVNRV 314 (362)
Q Consensus 282 ~~a~~~g~~~~~~~~~~~~~~N--~~~~~~~~~~~ 314 (362)
++++++|++ .|+.+++.++= +.-|+..++.+
T Consensus 316 ~la~~~~v~--~Pi~~~v~~il~~~~~~~~~~~~l 348 (356)
T 3k96_A 316 ALAQKHAIE--MPLTFQVHRILHEDLDPQQAVQEL 348 (356)
T ss_dssp HHHHHTTCC--CHHHHHHHHHHHSCCCHHHHHHHH
T ss_pred HHHHHcCCC--CcHHHHHHHHHhCCCCHHHHHHHH
Confidence 999999998 88888876542 23345555544
No 29
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=99.94 E-value=9.6e-25 Score=203.41 Aligned_cols=253 Identities=17% Similarity=0.203 Sum_probs=194.8
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcE
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (362)
|||+|||+|.||..+|..|++. |++|++||+++++.+.+.+. .+..+++++++++++|+
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~~~~~~~~~~~~~-------------------g~~~~~~~~~~~~~~D~ 63 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKE--GVTVYAFDLMEANVAAVVAQ-------------------GAQACENNQKVAAASDI 63 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHT--TCEEEEECSSHHHHHHHHTT-------------------TCEECSSHHHHHHHCSE
T ss_pred CEEEEECccHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHC-------------------CCeecCCHHHHHhCCCE
Confidence 7999999999999999999998 99999999999999888752 24566788888889999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHH---HHHhhcCCCCEEEEeeCCccccHHHHHHHHHhccCCCceEEeeCCcc
Q 017997 82 VFVSVNTPTKTQGLGAGKAADLTYWESAAR---VIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEF 158 (362)
Q Consensus 82 Vii~vptp~~~~g~~~~~~~d~~~l~~~~~---~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~ 158 (362)
||+|+|.+. .+..++. ++.+.++++++|+..|+..+++.+.+.+.+.+. +. .++.+|..
T Consensus 64 vi~~vp~~~--------------~~~~v~~~~~~l~~~l~~~~~vv~~~~~~~~~~~~l~~~~~~~--g~--~~~~~p~~ 125 (301)
T 3cky_A 64 IFTSLPNAG--------------IVETVMNGPGGVLSACKAGTVIVDMSSVSPSSTLKMAKVAAEK--GI--DYVDAPVS 125 (301)
T ss_dssp EEECCSSHH--------------HHHHHHHSTTCHHHHSCTTCEEEECCCCCHHHHHHHHHHHHHT--TC--EEEECCEE
T ss_pred EEEECCCHH--------------HHHHHHcCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHc--CC--eEEEccCC
Confidence 999998542 3456664 777888999999998888877778887777653 22 33456754
Q ss_pred cccCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCcEEeCChhHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Q 017997 159 LAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRISSVNAMSALCE 238 (362)
Q Consensus 159 ~~~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~~ 238 (362)
..+..+.. ....+++|++ ++..+.++++|+.++. ..++..+.+.+.+.|++.|.+.++.+++++|+..+++
T Consensus 126 ~~~~~a~~---g~~~~~~~g~-----~~~~~~v~~ll~~~g~-~~~~~~~~g~~~~~Kl~~N~~~~~~~~~~~Ea~~l~~ 196 (301)
T 3cky_A 126 GGTKGAEA---GTLTIMVGAS-----EAVFEKIQPVLSVIGK-DIYHVGDTGAGDAVKIVNNLLLGCNMASLAEALVLGV 196 (301)
T ss_dssp SHHHHHHH---TCEEEEEESC-----HHHHHHHHHHHHHHEE-EEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHc---CCeEEEECCC-----HHHHHHHHHHHHHhcC-CEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44321111 1113556753 6788999999999862 3345677899999999999999999999999999999
Q ss_pred HhCCCHHHHHHHhcCCCC-------CCC-CCc--cCCCCCcccChhHhHHHHHHHHHhCCCchhHHHHHHHHHHHH
Q 017997 239 ATGANVSQVAFAVGTDSR-------IGP-KFL--NASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIKIND 304 (362)
Q Consensus 239 ~~g~d~~~v~~~~~~~~~-------i~~-~~~--~~g~g~gg~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~~~N~ 304 (362)
+.|++++++.+++..... ..+ ..+ +..+|+...++.||..++++.+++.|++ .|+.+++.+..+
T Consensus 197 ~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~kd~~~~~~~a~~~gv~--~p~~~~~~~~~~ 270 (301)
T 3cky_A 197 KCGLKPETMQEIIGKSSGRSYAMEAKMEKFIMSGDFAGGFAMDLQHKDLGLALEAGKEGNVP--LPMTAMATQIFE 270 (301)
T ss_dssp HTTCCHHHHHHHHHTSTTCBHHHHHHCCCCCCTCCCSSSSBHHHHHHHHHHHHHHHHHHTCC--CHHHHHHHHHHH
T ss_pred HcCCCHHHHHHHHHcCCCCCHHHHHhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHhCCC--ChHHHHHHHHHH
Confidence 999999999998875421 011 222 2335778889999999999999999999 787777665543
No 30
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=99.93 E-value=1.7e-24 Score=203.30 Aligned_cols=252 Identities=15% Similarity=0.145 Sum_probs=189.3
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcE
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (362)
|||+|||+|.||..+|..|++. |++|++||+++++++.+.+. .+..++++.++++++|+
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~--g~~V~~~~~~~~~~~~~~~~-------------------g~~~~~~~~~~~~~~Dv 89 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKM--GHTVTVWNRTAEKCDLFIQE-------------------GARLGRTPAEVVSTCDI 89 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT--TCCEEEECSSGGGGHHHHHT-------------------TCEECSCHHHHHHHCSE
T ss_pred CeEEEEcccHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHc-------------------CCEEcCCHHHHHhcCCE
Confidence 7899999999999999999998 99999999999988877652 23456678787899999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHH---HhhcCCCCEEEEeeCCccccHHHHHHHHHhccCCCceEEeeCCcc
Q 017997 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVI---ADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEF 158 (362)
Q Consensus 82 Vii~vptp~~~~g~~~~~~~d~~~l~~~~~~i---~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~ 158 (362)
||+|||+|. .+..++..+ .+.++++++|++.|+..+.+.+.+.+.+.+. +. .++..|.+
T Consensus 90 Vi~av~~~~--------------~~~~v~~~~~~~~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~--~~--~~v~~p~~ 151 (316)
T 2uyy_A 90 TFACVSDPK--------------AAKDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSR--GG--RFLEAPVS 151 (316)
T ss_dssp EEECCSSHH--------------HHHHHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHT--TC--EEEECCEE
T ss_pred EEEeCCCHH--------------HHHHHHcCchhHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHc--CC--EEEEcCcc
Confidence 999998542 345555543 3677889999999998888888887777543 22 23445643
Q ss_pred cccCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCcEEeCChhHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Q 017997 159 LAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRISSVNAMSALCE 238 (362)
Q Consensus 159 ~~~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~~ 238 (362)
..+..... ....+++|++ ++..+.++++|+.++. ..++..+++.+.+.|++.|.+....+++++|+..+++
T Consensus 152 g~~~~~~~---g~~~~~~~g~-----~~~~~~v~~ll~~~g~-~~~~~~~~~~~~~~K~~~n~~~~~~~~~~~Ea~~la~ 222 (316)
T 2uyy_A 152 GNQQLSND---GMLVILAAGD-----RGLYEDCSSCFQAMGK-TSFFLGEVGNAAKMMLIVNMVQGSFMATIAEGLTLAQ 222 (316)
T ss_dssp SCHHHHHH---TCEEEEEEEC-----HHHHHHTHHHHHHHEE-EEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CChhHHhh---CCEEEEeCCC-----HHHHHHHHHHHHHhcC-CEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 32221111 1113556764 6788999999999862 3344568899999999999999999999999999999
Q ss_pred HhCCCHHHHHHHhcCCCCCCC-------CCc--cCCCCCcccChhHhHHHHHHHHHhCCCchhHHHHHHHHHHH
Q 017997 239 ATGANVSQVAFAVGTDSRIGP-------KFL--NASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIKIN 303 (362)
Q Consensus 239 ~~g~d~~~v~~~~~~~~~i~~-------~~~--~~g~g~gg~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~~~N 303 (362)
+.|++++++.+++.....-.+ ..+ +..+|+...++.||..++++.+++.|++ .++.+++.++-
T Consensus 223 ~~G~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~g~~~~~~~kd~~~~~~~a~~~gv~--~p~~~~v~~~~ 294 (316)
T 2uyy_A 223 VTGQSQQTLLDILNQGQLASIFLDQKCQNILQGNFKPDFYLKYIQKDLRLAIALGDAVNHP--TPMAAAANEVY 294 (316)
T ss_dssp HTTCCHHHHHHHHHHSTTCCHHHHHHHHHHHHTCCCCSSBHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHHHH
T ss_pred HcCCCHHHHHHHHHcCCCCCHHHHHhhHHhhcCCCCCCCcHHHHHHHHHHHHHHHHHhCCC--ChHHHHHHHHH
Confidence 999999999998875431100 011 2346788889999999999999999999 77777655443
No 31
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=99.93 E-value=9.3e-25 Score=214.63 Aligned_cols=207 Identities=13% Similarity=0.164 Sum_probs=166.7
Q ss_pred CceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhc---
Q 017997 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS--- 77 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~--- 77 (362)
||+|+|||+|.||.+||.+|+++ ||+|++||+++++++.+.+.... ..++..+++++++++
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~--G~~V~v~dr~~~~~~~l~~~g~~--------------g~~i~~~~s~~e~v~~l~ 67 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDH--GFVVCAFNRTVSKVDDFLANEAK--------------GTKVVGAQSLKEMVSKLK 67 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSTHHHHHHHHTTTT--------------TSSCEECSSHHHHHHTBC
T ss_pred CCEEEEEChhHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHhcccC--------------CCceeccCCHHHHHhhcc
Confidence 58999999999999999999999 99999999999999988763211 124566788888765
Q ss_pred CCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhccCCCceEEeeCCc
Q 017997 78 EADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPE 157 (362)
Q Consensus 78 ~aDvVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe 157 (362)
++|+||+|||++ ..+.++++++.+.++++++||+.||..+.+++++.+.+.+. |. .++.+|.
T Consensus 68 ~aDvVil~Vp~~--------------~~v~~vl~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~--Gi--~fvd~pV 129 (484)
T 4gwg_A 68 KPRRIILLVKAG--------------QAVDDFIEKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAK--GI--LFVGSGV 129 (484)
T ss_dssp SSCEEEECSCSS--------------HHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHT--TC--EEEEEEE
T ss_pred CCCEEEEecCCh--------------HHHHHHHHHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhh--cc--ccccCCc
Confidence 599999999864 24677889999999999999999999998888777767664 22 3345565
Q ss_pred ccccCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCc-------EEeCChhHHHHHHHHHhHHHHHHHHHH
Q 017997 158 FLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDR-------ILTTNLWSAELSKLAANAFLAQRISSV 230 (362)
Q Consensus 158 ~~~~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~~~-------~~~~~~~~ae~~Kl~~N~~~~~~ia~~ 230 (362)
...+..+.. .+.+++|++ +++.++++++|+.++. .. ++.++.+.++++|+++|.+.+.+++++
T Consensus 130 sGg~~gA~~----G~~im~GG~-----~ea~~~v~pll~~ig~-~v~~~~~~~~~~G~~Gag~~vKmv~N~i~~~~m~~i 199 (484)
T 4gwg_A 130 SGGEEGARY----GPSLMPGGN-----KEAWPHIKTIFQGIAA-KVGTGEPCCDWVGDEGAGHFVKMVHNGIEYGDMQLI 199 (484)
T ss_dssp ESHHHHHHH----CCEEEEEEC-----GGGHHHHHHHHHHHSC-BCTTSCBSBCCCEETTHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHhc----CCeeecCCC-----HHHHHHHHHHHHHhcC-cccCCCceEEEECCccHHHHHHHHHHHHHHHHHHHH
Confidence 444433322 226788986 6789999999999863 22 456678999999999999999999999
Q ss_pred HHHHHHHHH-hCCCHHHHHHHh
Q 017997 231 NAMSALCEA-TGANVSQVAFAV 251 (362)
Q Consensus 231 nE~~~l~~~-~g~d~~~v~~~~ 251 (362)
+|+..++++ +|+|++++.+++
T Consensus 200 aEa~~l~~~~~Gld~~~l~~v~ 221 (484)
T 4gwg_A 200 CEAYHLMKDVLGMAQDEMAQAF 221 (484)
T ss_dssp HHHHHHHHHTSCCCHHHHHHHH
T ss_pred HHHHHHHHHhcCCCHHHHHHHH
Confidence 999999999 999999998886
No 32
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=99.93 E-value=1.4e-24 Score=200.97 Aligned_cols=251 Identities=16% Similarity=0.161 Sum_probs=189.3
Q ss_pred CceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCc
Q 017997 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (362)
||||+|||+|.||..+|..|++ |++|++||+++++.+.+.+. ++..++ +.++++++|
T Consensus 1 M~~i~iiG~G~~G~~~a~~l~~---g~~V~~~~~~~~~~~~~~~~-------------------g~~~~~-~~~~~~~~D 57 (289)
T 2cvz_A 1 MEKVAFIGLGAMGYPMAGHLAR---RFPTLVWNRTFEKALRHQEE-------------------FGSEAV-PLERVAEAR 57 (289)
T ss_dssp -CCEEEECCSTTHHHHHHHHHT---TSCEEEECSSTHHHHHHHHH-------------------HCCEEC-CGGGGGGCS
T ss_pred CCeEEEEcccHHHHHHHHHHhC---CCeEEEEeCCHHHHHHHHHC-------------------CCcccC-HHHHHhCCC
Confidence 7899999999999999999986 68999999999998887642 112233 566688999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhccCCCceEEeeCCcccc
Q 017997 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEFLA 160 (362)
Q Consensus 81 vVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~~~ 160 (362)
+||+|+|++. .+..+++++.+.++++++|++.|+..+.+.+.+.+.+++. + ..++.+|....
T Consensus 58 ~vi~~v~~~~--------------~~~~v~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~--g--~~~~~~p~~~~ 119 (289)
T 2cvz_A 58 VIFTCLPTTR--------------EVYEVAEALYPYLREGTYWVDATSGEPEASRRLAERLREK--G--VTYLDAPVSGG 119 (289)
T ss_dssp EEEECCSSHH--------------HHHHHHHHHTTTCCTTEEEEECSCCCHHHHHHHHHHHHTT--T--EEEEECCEESH
T ss_pred EEEEeCCChH--------------HHHHHHHHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHc--C--CEEEEecCCCC
Confidence 9999998542 3566778888888999999999998888888887777653 2 23445674332
Q ss_pred cCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCcEEeCChhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHh
Q 017997 161 EGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRISSVNAMSALCEAT 240 (362)
Q Consensus 161 ~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~~~~ 240 (362)
+..+.. . ...+++|++ ++..+.++++| .++. ..++..+...+.+.|++.|++.++.+++++|+..++++.
T Consensus 120 ~~~~~~--g-~~~~~~~~~-----~~~~~~~~~ll-~~g~-~~~~~~~~~~~~~~k~~~n~~~~~~~~~~~Ea~~l~~~~ 189 (289)
T 2cvz_A 120 TSGAEA--G-TLTVMLGGP-----EEAVERVRPFL-AYAK-KVVHVGPVGAGHAVKAINNALLAVNLWAAGEGLLALVKQ 189 (289)
T ss_dssp HHHHHH--T-CEEEEEESC-----HHHHHHHGGGC-TTEE-EEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hhHHhh--C-CeEEEECCC-----HHHHHHHHHHH-hhcC-CeEEcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 322211 1 113556653 67889999999 8752 245667889999999999999999999999999999999
Q ss_pred CCCHHHHHHHhcCCCC-------CCC-CCc--cCCCCCcccChhHhHHHHHHHHHhCCCchhHHHHHHHHHHHH
Q 017997 241 GANVSQVAFAVGTDSR-------IGP-KFL--NASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIKIND 304 (362)
Q Consensus 241 g~d~~~v~~~~~~~~~-------i~~-~~~--~~g~g~gg~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~~~N~ 304 (362)
|+|++++.+++..... .++ ..+ +..+|+...++.||...+++.++++|++ .++.+++.+.-+
T Consensus 190 G~~~~~~~~~~~~~~~~s~~~~~~~~~~~l~~~~~~g~~~~~~~kd~~~~~~~a~~~gv~--~p~~~~v~~~~~ 261 (289)
T 2cvz_A 190 GVSAEKALEVINASSGRSNATENLIPQRVLTRAFPKTFALGLLVKDLGIAMGVLDGEKAP--SPLLRLAREVYE 261 (289)
T ss_dssp TCCHHHHHHHHTTSTTCBHHHHHTHHHHTTTSCCCCSSBHHHHHHHHHHHHHHHTTTCCC--CHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHccCCCCHHHHHhccchhhcCCCCCCcChHHHHHHHHHHHHHHHHcCCC--ChHHHHHHHHHH
Confidence 9999999999876431 111 121 2245777789999999999999999999 787777665543
No 33
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=99.90 E-value=7.6e-23 Score=202.62 Aligned_cols=252 Identities=12% Similarity=0.102 Sum_probs=186.5
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcC---
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSE--- 78 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~--- 78 (362)
.+|+|||+|.||.+||.+|+++ ||+|++||+++++++.+.++..+ + .++..+++++++++.
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~--G~~V~v~dr~~~~~~~l~~~~~~----~----------~gi~~~~s~~e~v~~l~~ 74 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADH--GFTVCAYNRTQSKVDHFLANEAK----G----------KSIIGATSIEDFISKLKR 74 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSHHHHHHHHTTTT----T----------SSEECCSSHHHHHHTSCS
T ss_pred CCEEEEeeHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHccccc----C----------CCeEEeCCHHHHHhcCCC
Confidence 4899999999999999999999 99999999999999998863211 0 247778888887776
Q ss_pred CcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhccCCCceEEeeCCcc
Q 017997 79 ADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEF 158 (362)
Q Consensus 79 aDvVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~ 158 (362)
+|+||+|||++ ..+.++++++.+.++++++||+.||..+.+++++.+.+++. |..| +..|..
T Consensus 75 aDvVil~Vp~~--------------~~v~~vl~~l~~~l~~g~iIId~s~~~~~~~~~l~~~l~~~--g~~~--v~~pVs 136 (497)
T 2p4q_A 75 PRKVMLLVKAG--------------APVDALINQIVPLLEKGDIIIDGGNSHFPDSNRRYEELKKK--GILF--VGSGVS 136 (497)
T ss_dssp SCEEEECCCSS--------------HHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHT--TCEE--EEEEEE
T ss_pred CCEEEEEcCCh--------------HHHHHHHHHHHHhCCCCCEEEECCCCChhHHHHHHHHHHHc--CCce--eCCCcc
Confidence 99999999864 24678889999999999999999999888888777777654 2232 344543
Q ss_pred cccCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCC------cEEeCChhHHHHHHHHHhHHHHHHHHHHHH
Q 017997 159 LAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPED------RILTTNLWSAELSKLAANAFLAQRISSVNA 232 (362)
Q Consensus 159 ~~~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~~------~~~~~~~~~ae~~Kl~~N~~~~~~ia~~nE 232 (362)
..|..+.. .+.+++|+. +++.+.++++|+.++. . ..+.+..+.+.++|+++|.+.+..++.++|
T Consensus 137 gg~~~a~~----G~~im~gg~-----~e~~~~v~~ll~~~g~-~~dGe~~v~~vg~~G~g~~~Kl~~N~~~~~~~~~laE 206 (497)
T 2p4q_A 137 GGEEGARY----GPSLMPGGS-----EEAWPHIKNIFQSISA-KSDGEPCCEWVGPAGAGHYVKMVHNGIEYGDMQLICE 206 (497)
T ss_dssp SHHHHHHH----CCEEEEEEC-----GGGHHHHHHHHHHHSC-EETTEESCCCCEETTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cChhHhhc----CCeEEecCC-----HHHHHHHHHHHHHhcC-ccCCCCceEEECCccHHHHHHHHHHHHHHHHHHHHHH
Confidence 33332221 224778875 5788999999999863 2 244556789999999999999999999999
Q ss_pred HHHHHHH-hCCCHHHHHHHhc---CCCCCCC------C-Cc--cCCCCCcccChh-----HhHH-HHHHHHHhCCCchhH
Q 017997 233 MSALCEA-TGANVSQVAFAVG---TDSRIGP------K-FL--NASVGFGGSCFQ-----KDIL-NLVYICECNGLPEVA 293 (362)
Q Consensus 233 ~~~l~~~-~g~d~~~v~~~~~---~~~~i~~------~-~~--~~g~g~gg~cl~-----kD~~-~l~~~a~~~g~~~~~ 293 (362)
+..++++ +|+|++++.+++. ...--++ . +. ++.+++--..+. ||+. .....|++.|++ .
T Consensus 207 a~~l~~~~lGl~~~~~~~~~~~w~~g~~~S~l~~~~~~~l~~~d~~~~~~vd~i~D~~~~KgtG~~~~~~A~~~Gv~--~ 284 (497)
T 2p4q_A 207 AYDIMKRLGGFTDKEISDVFAKWNNGVLDSFLVEITRDILKFDDVDGKPLVEKIMDTAGQKGTGKWTAINALDLGMP--V 284 (497)
T ss_dssp HHHHHHHTTCCCHHHHHHHHHHHHTTTTCBHHHHHHHHHHTCBCTTSSBGGGGSCCCCCCCSHHHHHHHHHHHHTCC--C
T ss_pred HHHHHHHccCCCHHHHHHHHHHhcCCccccHHHHHHHHHHhcCCCCCccHHHHHHHhhccchHHHHHHHHHHHcCCC--C
Confidence 9999999 6999999998883 2210000 0 00 111123333333 7765 677899999999 6
Q ss_pred HHHHHH
Q 017997 294 EYWKQV 299 (362)
Q Consensus 294 ~~~~~~ 299 (362)
|++.++
T Consensus 285 P~~~~a 290 (497)
T 2p4q_A 285 TLIGEA 290 (497)
T ss_dssp HHHHHH
T ss_pred chHHHH
Confidence 776664
No 34
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=99.90 E-value=1.6e-22 Score=190.99 Aligned_cols=275 Identities=14% Similarity=0.115 Sum_probs=192.8
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeC--CHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEec--CHHhhhc
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDI--SVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFST--DVEKHVS 77 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~--~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~--d~~~a~~ 77 (362)
|||+|||+|.||.++|..|+++ ||+|++||+ ++++++.+++....... +.. . .++.+++ ++.++++
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~-g~~------~-~~~~~~~~~~~~~~~~ 70 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDN--GNEVRIWGTEFDTEILKSISAGREHPRL-GVK------L-NGVEIFWPEQLEKCLE 70 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHH--CCEEEEECCGGGHHHHHHHHTTCCBTTT-TBC------C-CSEEEECGGGHHHHHT
T ss_pred CEEEEECcCHHHHHHHHHHHhC--CCeEEEEEccCCHHHHHHHHHhCcCccc-Ccc------c-cceEEecHHhHHHHHh
Confidence 7999999999999999999999 999999999 99999999875432211 110 0 2456777 7877789
Q ss_pred CCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEee-CC---ccccHHHHHHHHHhccCC-CceEE
Q 017997 78 EADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKS-TV---PVKTAEAIEKILTHNSKG-IKFQI 152 (362)
Q Consensus 78 ~aDvVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~S-Tv---~~gt~~~l~~~l~~~~~g-~~~~v 152 (362)
++|+||+|||++ .+.++++++.+ ++++++|+..+ ++ ++++.+.+.+.+.+..++ ..+.+
T Consensus 71 ~~D~vi~~v~~~---------------~~~~v~~~i~~-l~~~~~vv~~~ng~~~~~~~~~~~l~~~~~~~~g~~~~~~~ 134 (335)
T 1txg_A 71 NAEVVLLGVSTD---------------GVLPVMSRILP-YLKDQYIVLISKGLIDFDNSVLTVPEAVWRLKHDLRERTVA 134 (335)
T ss_dssp TCSEEEECSCGG---------------GHHHHHHHHTT-TCCSCEEEECCCSEEEETTEEEEHHHHHHTTSTTCGGGEEE
T ss_pred cCCEEEEcCChH---------------HHHHHHHHHhc-CCCCCEEEEEcCcCccCCCCcCccHHHHHHHhcCCCCcEEE
Confidence 999999999853 25778888988 88899888776 57 778877887777653211 23455
Q ss_pred eeCCcccccCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCcEEeCChhHHHHH-----------------
Q 017997 153 LSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELS----------------- 215 (362)
Q Consensus 153 ~~~Pe~~~~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ae~~----------------- 215 (362)
..+|.+...+.. ..+..+++|+. +++..+.++++|+..+. ..+...|+..++|.
T Consensus 135 ~~~p~~~~~~~~----g~~~~~~~~~~----~~~~~~~~~~ll~~~g~-~~~~~~di~~~~~~k~~~N~~~~~~~~~~~~ 205 (335)
T 1txg_A 135 ITGPAIAREVAK----RMPTTVVFSSP----SESSANKMKEIFETEYF-GVEVTTDIIGTEITSALKNVYSIAIAWIRGY 205 (335)
T ss_dssp EESSCCHHHHHT----TCCEEEEEECS----CHHHHHHHHHHHCBTTE-EEEEESCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EECCCcHHHHHc----cCCcEEEEEeC----CHHHHHHHHHHhCCCcE-EEEecCchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 667766543221 22334667765 26788999999998652 34456789888887
Q ss_pred HHH-----HhHHHHHHHHHHHHHHHHHHHhCCCHHHHH------HHhcCCCCCCCCC-c--cCCCCCcc----------c
Q 017997 216 KLA-----ANAFLAQRISSVNAMSALCEATGANVSQVA------FAVGTDSRIGPKF-L--NASVGFGG----------S 271 (362)
Q Consensus 216 Kl~-----~N~~~~~~ia~~nE~~~l~~~~g~d~~~v~------~~~~~~~~i~~~~-~--~~g~g~gg----------~ 271 (362)
|+. +|.++++..+.++|+..+++++|+|+.++. +.+.+... +.+. + ..++|+.. +
T Consensus 206 ~~~~l~~~~n~~~~~~~~~~~E~~~la~~~G~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~s~~~d~~~~~~~~ 284 (335)
T 1txg_A 206 ESRKNVEMSNAKGVIATRAINEMAELIEILGGDRETAFGLSGFGDLIATFRG-GRNGMLGELLGKGLSIDEAMEELERRG 284 (335)
T ss_dssp HHHHTCCCHHHHHHHHHHHHHHHHHHHHHHTSCGGGGGSTTTHHHHHHTTTC-HHHHHHHHHHHTTCCHHHHHHHHHHTT
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcchhhcccchhheeecccc-CccHHHHHHHhCCCCHHHHHHHhccCC
Confidence 555 777888899999999999999999987654 33322110 0000 0 11223311 0
Q ss_pred -Ch---hHhHHHHHHHHHhCCCchhHHHHHHHHHHHHH--hHHHHHHHH
Q 017997 272 -CF---QKDILNLVYICECNGLPEVAEYWKQVIKINDY--QKSRFVNRV 314 (362)
Q Consensus 272 -cl---~kD~~~l~~~a~~~g~~~~~~~~~~~~~~N~~--~~~~~~~~~ 314 (362)
+. .||..++.+.++++|++ .|+.+.+.++... .|+..++.+
T Consensus 285 ~~~~E~~~~~~~~~~~a~~~gv~--~P~~~~~~~~~~~~~~~~~~~~~l 331 (335)
T 1txg_A 285 VGVVEGYKTAEKAYRLSSKINAD--TKLLDSIYRVLYEGLKVEEVLFEL 331 (335)
T ss_dssp CCCCHHHHHHHHHHHHHHHTTCC--CHHHHHHHHHHHSCCCHHHHHHHH
T ss_pred ceecchHHHHHHHHHHHHHcCCC--CcHHHHHHHHHhCCCCHHHHHHHH
Confidence 33 39999999999999999 8998888887765 344444433
No 35
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=99.90 E-value=2e-23 Score=200.60 Aligned_cols=270 Identities=15% Similarity=0.149 Sum_probs=189.6
Q ss_pred CceEEEEcCChhHHHHHHHHHHcCCC-------CeEEEEeCCHH-----HHHHHHcC-CCCCCCCChHHHHhhhcCCCEE
Q 017997 1 MVKICCIGAGYVGGPTMAVIALKCPS-------IEVAVVDISVS-----RINAWNSD-QLPIYEPGLDGVVKQCRGKNLF 67 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~la~~~~G-------~~V~~~d~~~~-----~~~~l~~~-~~~~~e~~l~~~~~~~~~~~l~ 67 (362)
||||+|||+|.||+++|..|+++ | |+|++||++++ +++.+++. ..+.+.++.. ...++.
T Consensus 21 ~~kI~iIGaG~mG~alA~~L~~~--G~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~------~~~~i~ 92 (375)
T 1yj8_A 21 PLKISILGSGNWASAISKVVGTN--AKNNYLFENEVRMWIRDEFVNGERMVDIINNKHENTKYLKGVP------LPHNIV 92 (375)
T ss_dssp CBCEEEECCSHHHHHHHHHHHHH--HHHCTTBCSCEEEECCSCC---CCHHHHHHHHCBCTTTSTTCB------CCTTEE
T ss_pred CCEEEEECcCHHHHHHHHHHHHc--CCccCCCCCeEEEEECChhhhhHHHHHHHHhcCcccccCCccc------CcCCeE
Confidence 47999999999999999999998 8 99999999998 88888763 2333334321 123578
Q ss_pred EecCHHhhhcCCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHh----hcCCCCEEEEee-CCcc--ccHHHHHHH
Q 017997 68 FSTDVEKHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIAD----VSKSDKIVVEKS-TVPV--KTAEAIEKI 140 (362)
Q Consensus 68 ~t~d~~~a~~~aDvVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~----~l~~~~iVv~~S-Tv~~--gt~~~l~~~ 140 (362)
+++|++++++++|+||+|||+ ..+.++++++.+ .++++++|+..+ ++.+ ++.+.+.+.
T Consensus 93 ~~~~~~ea~~~aDvVilav~~---------------~~~~~vl~~i~~~~~~~l~~~~ivvs~~~Gi~~~~~~~~~l~~~ 157 (375)
T 1yj8_A 93 AHSDLASVINDADLLIFIVPC---------------QYLESVLASIKESESIKIASHAKAISLTKGFIVKKNQMKLCSNY 157 (375)
T ss_dssp EESSTHHHHTTCSEEEECCCH---------------HHHHHHHHHHTC---CCCCTTCEEEECCCSCEEETTEEECHHHH
T ss_pred EECCHHHHHcCCCEEEEcCCH---------------HHHHHHHHHHhhhhhccCCCCCEEEEeCCccccCCccccCHHHH
Confidence 889988888999999999984 257888899988 888899887766 3666 344455555
Q ss_pred HHhccCCCceEEeeCCcccccCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCcEEeCChhHHHHHHHH--
Q 017997 141 LTHNSKGIKFQILSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLA-- 218 (362)
Q Consensus 141 l~~~~~g~~~~v~~~Pe~~~~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ae~~Kl~-- 218 (362)
+++.. +..+.+..+|.+..+... ..+..+++++. +++..+.++++|+..+. ..+...|+...+|.|++
T Consensus 158 l~~~~-~~~~~v~~gp~~a~~v~~----g~~~~~~~~~~----~~~~~~~v~~ll~~~g~-~~~~~~di~~~~~~k~l~N 227 (375)
T 1yj8_A 158 ISDFL-NIPCSALSGANIAMDVAM----ENFSEATIGGN----DKDSLVIWQRVFDLPYF-KINCVNETIEVEICGALKN 227 (375)
T ss_dssp HHHHS-SSCEEEEECSCCHHHHHT----TCCEEEEEECS----CHHHHHHHHHHHCBTTE-EEEEESCSHHHHHHHHHHH
T ss_pred HHHHc-CCCEEEEeCCchHHHHHh----CCCeEEEEecC----CHHHHHHHHHHhCCCCe-EEEEeCCcHHHHHHHHHHH
Confidence 55432 234566778876543221 23334555655 26788999999998652 24456788888998876
Q ss_pred ---------------HhHHHHHHHHHHHHHHHHHHHh--CCCHHHHHHHhc--------CCCC---CCCCCccCC--CCC
Q 017997 219 ---------------ANAFLAQRISSVNAMSALCEAT--GANVSQVAFAVG--------TDSR---IGPKFLNAS--VGF 268 (362)
Q Consensus 219 ---------------~N~~~~~~ia~~nE~~~l~~~~--g~d~~~v~~~~~--------~~~~---i~~~~~~~g--~g~ 268 (362)
.|.++++..++++|+..++++. |+|++++.++.+ ...+ ++..+..+| ..+
T Consensus 228 ~~~~~~g~~~~~~~~~n~~~a~~~~~~~E~~~la~a~G~G~~~~~~~~~~g~~dl~~t~~~~~~~~~~~~~~~~g~~~~~ 307 (375)
T 1yj8_A 228 IITLACGFCDGLNLPTNSKSAIIRNGINEMILFGKVFFQKFNENILLESCGFADIITSFLAGRNAKCSAEFIKSTPKKTW 307 (375)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHSSCCCGGGGGSTTTHHHHHHHHSSSSHHHHHHHHHHHTTSSCH
T ss_pred HHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHHhccCCCcchhhccccccceeEeeeCCccHHHHHHHHhcCCCCCH
Confidence 4557888999999999999999 699877643211 1111 110010101 111
Q ss_pred c--------ccCh--hHhHHHHHHHHHhCCC--chhHHHHHHHHHHHHH
Q 017997 269 G--------GSCF--QKDILNLVYICECNGL--PEVAEYWKQVIKINDY 305 (362)
Q Consensus 269 g--------g~cl--~kD~~~l~~~a~~~g~--~~~~~~~~~~~~~N~~ 305 (362)
. |.+. .+|..++.+.++++|+ + .|+.+.+.++...
T Consensus 308 ~d~~~~~~~g~~~E~~~~~~~v~~~a~~~gv~~~--~P~~~~v~~~~~~ 354 (375)
T 1yj8_A 308 EELENEILKGQKLQGTVTLKYVYHMIKEKNMTNE--FPLFTVLHKISFE 354 (375)
T ss_dssp HHHHHHHHTTCCCHHHHHHHHHHHHHHHTTCGGG--CHHHHHHHHHHHS
T ss_pred HHHHHhhcCCcEeeHHHHHHHHHHHHHHhCCCCC--CCHHHHHHHHHhC
Confidence 1 4444 8999999999999999 8 8888888877653
No 36
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=99.90 E-value=1.1e-23 Score=201.84 Aligned_cols=278 Identities=17% Similarity=0.169 Sum_probs=192.7
Q ss_pred eEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCC-CCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcE
Q 017997 3 KICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQ-LPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (362)
Q Consensus 3 kI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~-~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (362)
||+|||+|.||.++|..|+++ ||+|++||+++++++.+++.. .+.+.++.. ...++.++++++++++++|+
T Consensus 17 kI~iIG~G~mG~~la~~L~~~--G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~aDv 88 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKK--CREVCVWHMNEEEVRLVNEKRENVLFLKGVQ------LASNITFTSDVEKAYNGAEI 88 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTT--EEEEEEECSCHHHHHHHHHHTBCTTTSTTCB------CCTTEEEESCHHHHHTTCSS
T ss_pred eEEEECCCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHHcCcccccccccc------cccceeeeCCHHHHHcCCCE
Confidence 999999999999999999998 999999999999999887643 222333321 12357888899888899999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHH----HHhhcCC-CCEEEEee-CCccccHHHHHHHHHhccCCCceEEeeC
Q 017997 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARV----IADVSKS-DKIVVEKS-TVPVKTAEAIEKILTHNSKGIKFQILSN 155 (362)
Q Consensus 82 Vii~vptp~~~~g~~~~~~~d~~~l~~~~~~----i~~~l~~-~~iVv~~S-Tv~~gt~~~l~~~l~~~~~g~~~~v~~~ 155 (362)
||+|||+ ..+.+++++ +.+.+++ +++|+..+ ++.+.+.+.+.+.+.+..++..+.+..+
T Consensus 89 Vilav~~---------------~~~~~v~~~~~~gl~~~l~~~~~ivv~~~~gi~~~~~~~~~~~l~~~~~~~~~~v~~g 153 (366)
T 1evy_A 89 ILFVIPT---------------QFLRGFFEKSGGNLIAYAKEKQVPVLVCTKGIERSTLKFPAEIIGEFLPSPLLSVLAG 153 (366)
T ss_dssp EEECCCH---------------HHHHHHHHHHCHHHHHHHHHHTCCEEECCCSCCTTTCCCHHHHHTTTSCGGGEEEEES
T ss_pred EEECCCh---------------HHHHHHHHHhHHHHHHhcCccCCEEEEECCcCCCccccCHHHHHHHHCCCCcEEEEeC
Confidence 9999984 246778888 8888887 88887766 5777766666666655322223456677
Q ss_pred CcccccCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhcc--CCCCcEEeCChhHHHHHHHH---------------
Q 017997 156 PEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHW--VPEDRILTTNLWSAELSKLA--------------- 218 (362)
Q Consensus 156 Pe~~~~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~ae~~Kl~--------------- 218 (362)
|.+..+... ..+..+++++. +++..+.++++|+.. +. ..+...|+...+|.|++
T Consensus 154 p~~~~~~~~----g~~~~~~~~~~----~~~~~~~v~~ll~~~g~g~-~~~~~~di~~~~~~k~~~n~~~~~~~~~~~~~ 224 (366)
T 1evy_A 154 PSFAIEVAT----GVFTCVSIASA----DINVARRLQRIMSTGDRSF-VCWATTDTVGCEVASAVKNVLAIGSGVANGLG 224 (366)
T ss_dssp SCCHHHHHT----TCCEEEEEECS----SHHHHHHHHHHHSCTTSSE-EEEEESCHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CChHHHHHh----CCceEEEEecC----CHHHHHHHHHHhcCCCCeE-EEEEcCCchHHHHHHHHHhHHHHHHHHHhhcc
Confidence 776543211 22333455654 267889999999987 42 23445788888888775
Q ss_pred --HhHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhc--------CCCCCCCCC-----ccCCCCCc------ccC--hhH
Q 017997 219 --ANAFLAQRISSVNAMSALCEATGANVSQVAFAVG--------TDSRIGPKF-----LNASVGFG------GSC--FQK 275 (362)
Q Consensus 219 --~N~~~~~~ia~~nE~~~l~~~~g~d~~~v~~~~~--------~~~~i~~~~-----~~~g~g~g------g~c--l~k 275 (362)
+|.++++.+++++|+..++++.|+|++++.++.+ ..+ ...++ +..|..+. +.+ ..|
T Consensus 225 ~~~n~~~~~~~~~~~E~~~la~a~Gi~~~~~~~~~~~~~~~~~~~s~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~e~~~ 303 (366)
T 1evy_A 225 MGLNARAALIMRGLLEIRDLTAALGGDGSAVFGLAGLGDLQLTCSSE-LSRNFTVGKKLGKGLPIEEIQRTSKAVAEGVA 303 (366)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTTCCCTTTTSTTTHHHHHHHHTCT-TSHHHHHHHHHHTTCCHHHHHC---CCCHHHH
T ss_pred CCccHHHHHHHHHHHHHHHHHHHhCCCCccccccccchhheeeecCC-CCchHHHHHHHhCCCCHHHHHHHcCCeeehHH
Confidence 4557788899999999999999999866543211 111 00000 00011111 223 359
Q ss_pred hHHHHHHHHHhCCCchhHHHHHHHHHHHHH--hHHHHHHHHH
Q 017997 276 DILNLVYICECNGLPEVAEYWKQVIKINDY--QKSRFVNRVV 315 (362)
Q Consensus 276 D~~~l~~~a~~~g~~~~~~~~~~~~~~N~~--~~~~~~~~~~ 315 (362)
|..++.+.++++|++ .|+.+.+.++... .|+..++.++
T Consensus 304 ~~~~v~~~a~~~gv~--~P~~~~v~~~~~~~~~~~~~~~~l~ 343 (366)
T 1evy_A 304 TADPLMRLAKQLKVK--MPLCHQIYEIVYKKKNPRDALADLL 343 (366)
T ss_dssp HHHHHHHHHHHHTCC--CHHHHHHHHHHHSCCCHHHHHHHHG
T ss_pred HHHHHHHHHHHhCCC--CcHHHHHHHHHHCCCCHHHHHHHHH
Confidence 999999999999999 8999988887765 4566666554
No 37
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=99.89 E-value=4.8e-22 Score=196.76 Aligned_cols=249 Identities=12% Similarity=0.122 Sum_probs=181.4
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhh---cC
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHV---SE 78 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~---~~ 78 (362)
|||+|||+|.||.++|..|+++ ||+|++||+++++++.++++..+ + .++..++++++++ ++
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~--G~~V~v~dr~~~~~~~l~~~~~~----g----------~gi~~~~~~~e~v~~l~~ 66 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDH--GFVVCAFNRTVSKVDDFLANEAK----G----------TKVLGAHSLEEMVSKLKK 66 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSTHHHHHHHHTTTT----T----------SSCEECSSHHHHHHHBCS
T ss_pred CeEEEEChHHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHhcccc----C----------CCeEEeCCHHHHHhhccC
Confidence 7999999999999999999999 99999999999999998863211 1 1366778888866 48
Q ss_pred CcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhccCCCceEEeeCCcc
Q 017997 79 ADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEF 158 (362)
Q Consensus 79 aDvVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~ 158 (362)
+|+||+|||++. .+.++++++.+.++++++||+.|+..+..++++.+.+++. |.. ++.+|..
T Consensus 67 aDvVilaVp~~~--------------~v~~vl~~l~~~l~~g~iII~~s~~~~~~~~~l~~~l~~~--g~~--~v~~pv~ 128 (482)
T 2pgd_A 67 PRRIILLVKAGQ--------------AVDNFIEKLVPLLDIGDIIIDGGNSEYRDTMRRCRDLKDK--GIL--FVGSGVS 128 (482)
T ss_dssp SCEEEECSCTTH--------------HHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHT--TCE--EEEEEEE
T ss_pred CCEEEEeCCChH--------------HHHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHc--CCe--EeCCCCC
Confidence 999999998642 4677888999999999999998887777676776666653 222 2345543
Q ss_pred cccCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCc-------EEeCChhHHHHHHHHHhHHHHHHHHHHH
Q 017997 159 LAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDR-------ILTTNLWSAELSKLAANAFLAQRISSVN 231 (362)
Q Consensus 159 ~~~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~~~-------~~~~~~~~ae~~Kl~~N~~~~~~ia~~n 231 (362)
..+..+ ..++.+++|++ ++..+.++++|+.++. .. .+.+..+.+.+.|+++|.+.+..+++++
T Consensus 129 g~~~~a----~~g~~i~~gg~-----~e~~~~v~~ll~~~g~-~v~d~~~~~~~~g~~g~g~~~Kl~~N~~~~~~~~~i~ 198 (482)
T 2pgd_A 129 GGEDGA----RYGPSLMPGGN-----KEAWPHIKAIFQGIAA-KVGTGEPCCDWVGDDGAGHFVKMVHNGIEYGDMQLIC 198 (482)
T ss_dssp SHHHHH----HHCCEEEEEEC-----TTTHHHHHHHHHHHSC-BCTTSCBSCCCCEETTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CChhhh----ccCCeEEeCCC-----HHHHHHHHHHHHHhhh-hccCCCcceEEECCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 333222 12225677875 4678889999998863 22 3445678899999999999999999999
Q ss_pred HHHHHHHHh-CCCHHHHHHHhc---CCCCCCC-------CCc---cCCCCCcccCh------hHhHHHHHHHHHhCCCch
Q 017997 232 AMSALCEAT-GANVSQVAFAVG---TDSRIGP-------KFL---NASVGFGGSCF------QKDILNLVYICECNGLPE 291 (362)
Q Consensus 232 E~~~l~~~~-g~d~~~v~~~~~---~~~~i~~-------~~~---~~g~g~gg~cl------~kD~~~l~~~a~~~g~~~ 291 (362)
|+..++++. |++++++.++++ ... .++ ..+ ++.+++--.-+ .+|...+...|+++|++
T Consensus 199 Ea~~l~~~~~G~~~~~~~~~~~~w~~g~-~~S~l~~~~~~~l~~~d~~~~~~ld~i~d~~~~k~t~~~~~~~A~~~Gv~- 276 (482)
T 2pgd_A 199 EAYHLMKDVLGLGHKEMAKAFEEWNKTE-LDSFLIEITASILKFQDADGKHLLPKIRDSAGQKGTGKWTAISALEYGVP- 276 (482)
T ss_dssp HHHHHHHHTSCCCHHHHHHHHHHHTTTT-TCBHHHHHHHHHHHCBCTTSSBSGGGSCCCCCCCSHHHHHHHHHHHHTCC-
T ss_pred HHHHHHHhcCCcCHHHHHHHHHHhcCCC-cCchHHHHHhHHhhccCCCCCeeecccccccccccHHHHHHHHHHHcCCC-
Confidence 999999999 999999999885 211 111 001 11112211111 34556788999999999
Q ss_pred hHHHHH
Q 017997 292 VAEYWK 297 (362)
Q Consensus 292 ~~~~~~ 297 (362)
.|++.
T Consensus 277 -~P~i~ 281 (482)
T 2pgd_A 277 -VTLIG 281 (482)
T ss_dssp -CHHHH
T ss_pred -cchHH
Confidence 77775
No 38
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=99.89 E-value=3e-22 Score=183.09 Aligned_cols=235 Identities=13% Similarity=0.102 Sum_probs=167.2
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeC--CHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCC
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDI--SVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEA 79 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~--~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~a 79 (362)
|||+|||+|.||.++|..|+++ ||+|++||+ ++++++.+.+. .++ ++++++++++
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~--g~~V~~~~~~~~~~~~~~~~~~-------------------g~~--~~~~~~~~~a 57 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSR--GVEVVTSLEGRSPSTIERARTV-------------------GVT--ETSEEDVYSC 57 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT--TCEEEECCTTCCHHHHHHHHHH-------------------TCE--ECCHHHHHTS
T ss_pred CeEEEEechHHHHHHHHHHHHC--CCeEEEeCCccCHHHHHHHHHC-------------------CCc--CCHHHHHhcC
Confidence 7999999999999999999998 999999999 78888776541 123 5566778999
Q ss_pred cEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhccCCCceEEeeCCccc
Q 017997 80 DIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEFL 159 (362)
Q Consensus 80 DvVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~~ 159 (362)
|+||+|||++. . .+.+.++.+.+++ +|++.||+.+.+.+.+.+.+++. | ++.+|...
T Consensus 58 Dvvi~~v~~~~--------------~-~~~~~~~~~~~~~--~vi~~s~~~~~~~~~l~~~~~~~--g----~~~~~v~~ 114 (264)
T 1i36_A 58 PVVISAVTPGV--------------A-LGAARRAGRHVRG--IYVDINNISPETVRMASSLIEKG--G----FVDAAIMG 114 (264)
T ss_dssp SEEEECSCGGG--------------H-HHHHHHHHTTCCS--EEEECSCCCHHHHHHHHHHCSSS--E----EEEEEECS
T ss_pred CEEEEECCCHH--------------H-HHHHHHHHHhcCc--EEEEccCCCHHHHHHHHHHHhhC--C----eeeeeeeC
Confidence 99999998542 1 2234567777766 88888899888877777666542 1 12233222
Q ss_pred ccCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCcEEeCC-hhHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Q 017997 160 AEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTN-LWSAELSKLAANAFLAQRISSVNAMSALCE 238 (362)
Q Consensus 160 ~~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~~ 238 (362)
.+..+.. .. . +++|+++ . +.+++ |+.++. ..+...+ ++.+++.|++.|.+.+..+++++|+..+++
T Consensus 115 ~~~~~~~--g~-~-~~~~g~~----~---~~~~~-l~~~g~-~~~~~~~~~g~~~~~kl~~n~~~~~~~~~~~Ea~~la~ 181 (264)
T 1i36_A 115 SVRRKGA--DI-R-IIASGRD----A---EEFMK-LNRYGL-NIEVRGREPGDASAIKMLRSSYTKGVSALLWETLTAAH 181 (264)
T ss_dssp CHHHHGG--GC-E-EEEESTT----H---HHHHG-GGGGTC-EEEECSSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred Ccccccc--CC-e-EEecCCc----H---HHhhh-HHHcCC-eeEECCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2211111 12 2 5677652 2 67788 998862 2344554 899999999999999999999999999999
Q ss_pred HhCCCHHHHHHHhcCCCCCCCCCc---------cCCCCCcccChhHhHHHHHHHHHhCCCchhHHHHHHHHHHHH
Q 017997 239 ATGANVSQVAFAVGTDSRIGPKFL---------NASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIKIND 304 (362)
Q Consensus 239 ~~g~d~~~v~~~~~~~~~i~~~~~---------~~g~g~gg~cl~kD~~~l~~~a~~~g~~~~~~~~~~~~~~N~ 304 (362)
+.|+|.+ +.+.+.... +..+. ...+|+. ..||+..+.+.+++. ++ .++.+++.+.-+
T Consensus 182 ~~G~~~~-~~~~~~~~~--g~~~~~~~~~~~~~~~~~g~~---~~~~~~~~~~~a~~~-v~--~p~~~~v~~~~~ 247 (264)
T 1i36_A 182 RLGLEED-VLEMLEYTE--GNDFRESAISRLKSSCIHARR---RYEEMKEVQDMLAEV-ID--PVMPTCIIRIFD 247 (264)
T ss_dssp HTTCHHH-HHHHHHTTS--CSSTHHHHHHHHHHHHHTHHH---HHHHHHHHHHHHHTT-SC--CSHHHHHHHHHH
T ss_pred HcCCcHH-HHHHHHHhc--CccHHHHHHHHhcCCCCcchh---hHHHHHHHHHHHHHh-cC--chHHHHHHHHHH
Confidence 9999986 777776532 21111 1123332 679999999999999 98 777777655443
No 39
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=99.89 E-value=8.8e-23 Score=194.47 Aligned_cols=268 Identities=16% Similarity=0.158 Sum_probs=184.8
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCC-------CeEEEEeCCHH-----HHHHHHcCC-CCCCCCChHHHHhhhcCCCEEE
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPS-------IEVAVVDISVS-----RINAWNSDQ-LPIYEPGLDGVVKQCRGKNLFF 68 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G-------~~V~~~d~~~~-----~~~~l~~~~-~~~~e~~l~~~~~~~~~~~l~~ 68 (362)
|||+|||+|.||.++|..|+++ | |+|++||++++ +.+.+++.+ ...+.++.. ...++.+
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~--g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~------~~~~~~~ 80 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGN--AAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHK------LPPNVVA 80 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH--HHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCC------CCTTEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhc--CCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCccc------CccCeEE
Confidence 7999999999999999999998 8 99999999998 888887532 222223211 1235788
Q ss_pred ecCHHhhhcCCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeC-Cc--cccHHHHHHHHHhcc
Q 017997 69 STDVEKHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKST-VP--VKTAEAIEKILTHNS 145 (362)
Q Consensus 69 t~d~~~a~~~aDvVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~ST-v~--~gt~~~l~~~l~~~~ 145 (362)
+++++++++++|+||+|||++ .+.++++++.++++++++|+..++ +. +++.+.+.+.+++..
T Consensus 81 ~~~~~~~~~~aD~Vilav~~~---------------~~~~v~~~i~~~l~~~~ivv~~~~Gi~~~~~~~~~l~~~l~~~~ 145 (354)
T 1x0v_A 81 VPDVVQAAEDADILIFVVPHQ---------------FIGKICDQLKGHLKANATGISLIKGVDEGPNGLKLISEVIGERL 145 (354)
T ss_dssp ESSHHHHHTTCSEEEECCCGG---------------GHHHHHHHHTTCSCTTCEEEECCCCBCSSSSSCCBHHHHHHHHH
T ss_pred EcCHHHHHcCCCEEEEeCCHH---------------HHHHHHHHHHhhCCCCCEEEEECCccCCCCCccccHHHHHHHHc
Confidence 889888889999999999842 357888999999998998877665 54 454444544444332
Q ss_pred CCCceEEeeCCcccccCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCcEEeCChhHHHHHHHH-------
Q 017997 146 KGIKFQILSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLA------- 218 (362)
Q Consensus 146 ~g~~~~v~~~Pe~~~~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ae~~Kl~------- 218 (362)
+.++.+..+|.+..+... ..+..+++++. +++..+.++++|+..+. ..+...|+...+|.|++
T Consensus 146 -~~~~~v~~gp~~a~~v~~----g~~~~~~~~~~----~~~~~~~v~~ll~~~g~-~~~~~~di~~~~~~k~~~N~~~~~ 215 (354)
T 1x0v_A 146 -GIPMSVLMGANIASEVAD----EKFCETTIGCK----DPAQGQLLKELMQTPNF-RITVVQEVDTVEICGALKNVVAVG 215 (354)
T ss_dssp -TCCEEEEECSCCHHHHHT----TCCEEEEEECS----SHHHHHHHHHHHCBTTE-EEEEESCHHHHHHHHHHHHHHHHH
T ss_pred -CCCEEEEECCCcHHHHHh----cCCceEEEEEC----CHHHHHHHHHHhCCCCE-EEEEcCCchHhHHHHHHHHHHHHH
Confidence 223556677876543111 22334556655 36788999999998652 23456788889999887
Q ss_pred ----------HhHHHHHHHHHHHHHHHHHHHhCC---CHHHHHHHh------cC--CCC---CCCCCccCCCCCc-----
Q 017997 219 ----------ANAFLAQRISSVNAMSALCEATGA---NVSQVAFAV------GT--DSR---IGPKFLNASVGFG----- 269 (362)
Q Consensus 219 ----------~N~~~~~~ia~~nE~~~l~~~~g~---d~~~v~~~~------~~--~~~---i~~~~~~~g~g~g----- 269 (362)
.|.++++....++|+..++++.|+ +++++.+.. .+ ..+ ++..+..++..+.
T Consensus 216 ~g~~~~~~~~~n~~~~~~~~~~~E~~~la~a~G~~~~~~~~~~~~~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (354)
T 1x0v_A 216 AGFCDGLGFGDNTKAAVIRLGLMEMIAFAKLFCSGPVSSATFLESCGVADLITTCYGGRNRKVAEAFARTGKSIEQLEKE 295 (354)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHSSSCCCGGGGGSTTTHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHH
T ss_pred HHHHHHccCCccHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccchHHHHHHhhcccccHHHHHHHHhcCCCHHHHHHh
Confidence 666778899999999999999998 876653221 10 000 1111111011111
Q ss_pred ---ccC--hhHhHHHHHHHHHhCCC--chhHHHHHHHHHHHH
Q 017997 270 ---GSC--FQKDILNLVYICECNGL--PEVAEYWKQVIKIND 304 (362)
Q Consensus 270 ---g~c--l~kD~~~l~~~a~~~g~--~~~~~~~~~~~~~N~ 304 (362)
|.+ ..||..++.+.++++|+ + .|+.+.+.++..
T Consensus 296 ~~~g~~~E~~~~~g~v~~~a~~~gv~~~--~P~~~~v~~~~~ 335 (354)
T 1x0v_A 296 LLNGQKLQGPETARELYSILQHKGLVDK--FPLFMAVYKVCY 335 (354)
T ss_dssp HSTTCCCHHHHHHHHHHHHHHHHTCGGG--SHHHHHHHHHHH
T ss_pred hcCCcEeehHHHHHHHHHHHHHhCCCCC--CCHHHHHHHHHh
Confidence 333 37999999999999999 8 788887776654
No 40
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=99.89 E-value=2.2e-21 Score=191.65 Aligned_cols=256 Identities=16% Similarity=0.124 Sum_probs=183.4
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcC-CCCCCCCChHHHHhhhcCCCEEEecCHHhhhc---
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSD-QLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS--- 77 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~-~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~--- 77 (362)
|||+|||+|.||.++|..|+++ ||+|++||+++++++.+++. ... +. ..++..+++++++++
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~--G~~V~v~dr~~~~~~~l~~~~g~~---~~---------~~~i~~~~~~~e~v~~l~ 67 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEK--GFKVAVFNRTYSKSEEFMKANASA---PF---------AGNLKAFETMEAFAASLK 67 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSHHHHHHHHHHTTTS---TT---------GGGEEECSCHHHHHHHBC
T ss_pred CEEEEEChHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHhcCCC---CC---------CCCeEEECCHHHHHhccc
Confidence 7999999999999999999999 99999999999999988752 111 10 013677888888766
Q ss_pred CCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhccCCCceEEeeCCc
Q 017997 78 EADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPE 157 (362)
Q Consensus 78 ~aDvVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe 157 (362)
++|+||+|||++ ..+.++++++.+.++++++||+.|+..+..++++.+.+++. |.. ++..|.
T Consensus 68 ~aDvVilaVp~~--------------~~v~~vl~~l~~~l~~g~iIId~sng~~~~~~~l~~~l~~~--g~~--~v~~pv 129 (478)
T 1pgj_A 68 KPRKALILVQAG--------------AATDSTIEQLKKVFEKGDILVDTGNAHFKDQGRRAQQLEAA--GLR--FLGMGI 129 (478)
T ss_dssp SSCEEEECCCCS--------------HHHHHHHHHHHHHCCTTCEEEECCCCCHHHHHHHHHHHHTT--TCE--EEEEEE
T ss_pred CCCEEEEecCCh--------------HHHHHHHHHHHhhCCCCCEEEECCCCChHHHHHHHHHHHHC--CCe--EEEeec
Confidence 499999999864 14677888999999999999998887777777776666653 222 223443
Q ss_pred ccccCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCC------cEEeCChhHHHHHHHHHhHHHHHHHHHHH
Q 017997 158 FLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPED------RILTTNLWSAELSKLAANAFLAQRISSVN 231 (362)
Q Consensus 158 ~~~~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~~------~~~~~~~~~ae~~Kl~~N~~~~~~ia~~n 231 (362)
...+..+. ..+.+++|+. ++..+.++++|+.++... ..+.++.+.+.+.|+++|.+.+..+++++
T Consensus 130 ~gg~~~a~----~g~~i~~gg~-----~~~~~~v~~ll~~~g~~~~dg~~~v~~~g~~G~g~~~Kl~~N~~~~~~~~~i~ 200 (478)
T 1pgj_A 130 SGGEEGAR----KGPAFFPGGT-----LSVWEEIRPIVEAAAAKADDGRPCVTMNGSGGAGSCVKMYHNSGEYAILQIWG 200 (478)
T ss_dssp ESHHHHHH----HCCEEEEEEC-----HHHHHHHHHHHHHHSCBCTTSCBSCCCCCSTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHh----cCCeEeccCC-----HHHHHHHHHHHHHhcccccCCCeeEEEeCCchHHHHHhhHHHHHHHHHHHHHH
Confidence 32221111 1124777875 678999999999886310 34556778999999999999999999999
Q ss_pred HHHHHHHHhCCCHHHHHHHhc----CCCC------CCCCCc-cCC-CC-CcccChh-----HhH-HHHHHHHHhCCCchh
Q 017997 232 AMSALCEATGANVSQVAFAVG----TDSR------IGPKFL-NAS-VG-FGGSCFQ-----KDI-LNLVYICECNGLPEV 292 (362)
Q Consensus 232 E~~~l~~~~g~d~~~v~~~~~----~~~~------i~~~~~-~~g-~g-~gg~cl~-----kD~-~~l~~~a~~~g~~~~ 292 (362)
|+..+++++|++++++.+++. .... +....+ .-. .| +--..+. ||+ ..+.+.|+++|++
T Consensus 201 Ea~~l~~~~G~~~~~~~~l~~~w~~~g~~~s~l~~~~~~~l~~~d~~G~~~ld~i~D~~~~kgtg~~~~~~A~~~Gv~-- 278 (478)
T 1pgj_A 201 EVFDILRAMGLNNDEVAAVLEDWKSKNFLKSYMLDISIAAARAKDKDGSYLTEHVMDRIGSKGTGLWSAQEALEIGVP-- 278 (478)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHTSTTCBHHHHHHHHHHHCBCTTSSBGGGGBCCCCCCCSHHHHHHHHHHHHTCC--
T ss_pred HHHHHHHHcCCCHHHHHHHHHHhccCCCcCchHHHhhchhhhcCCCCChhHHHHHHHHhcCccHHHHHHHHHHHhCCC--
Confidence 999999999999999998875 2110 000011 111 12 2112222 444 6899999999999
Q ss_pred HHHHHHHH
Q 017997 293 AEYWKQVI 300 (362)
Q Consensus 293 ~~~~~~~~ 300 (362)
.|+++++.
T Consensus 279 ~Pi~~~av 286 (478)
T 1pgj_A 279 APSLNMAV 286 (478)
T ss_dssp CHHHHHHH
T ss_pred ChHHHHHH
Confidence 78888743
No 41
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=99.89 E-value=5.8e-22 Score=195.71 Aligned_cols=251 Identities=13% Similarity=0.125 Sum_probs=184.6
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcC---
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSE--- 78 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~--- 78 (362)
|+|+|||+|.||.++|..|+++ |++|++||+++++++.+++... ..++..+++++++++.
T Consensus 16 ~~IgvIGlG~MG~~lA~~La~~--G~~V~v~~r~~~~~~~l~~~~~---------------~~gi~~~~s~~e~v~~l~~ 78 (480)
T 2zyd_A 16 QQIGVVGMAVMGRNLALNIESR--GYTVSIFNRSREKTEEVIAENP---------------GKKLVPYYTVKEFVESLET 78 (480)
T ss_dssp BSEEEECCSHHHHHHHHHHHTT--TCCEEEECSSHHHHHHHHHHST---------------TSCEEECSSHHHHHHTBCS
T ss_pred CeEEEEccHHHHHHHHHHHHhC--CCeEEEEeCCHHHHHHHHhhCC---------------CCCeEEeCCHHHHHhCCCC
Confidence 6899999999999999999999 9999999999999998875210 0147788899887776
Q ss_pred CcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhccCCCceEEeeCCcc
Q 017997 79 ADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEF 158 (362)
Q Consensus 79 aDvVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~ 158 (362)
+|+||+|||++. .+.++++++.+.++++++||+.|+..+.+++++.+.+++. |.. ++..|..
T Consensus 79 aDvVil~Vp~~~--------------~v~~vl~~l~~~l~~g~iIId~s~g~~~~t~~l~~~l~~~--g~~--~v~~pv~ 140 (480)
T 2zyd_A 79 PRRILLMVKAGA--------------GTDAAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAE--GFN--FIGTGVS 140 (480)
T ss_dssp SCEEEECSCSSS--------------HHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHT--TCE--EEEEEEE
T ss_pred CCEEEEECCCHH--------------HHHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHC--CCC--eeCCccc
Confidence 999999998642 3678889999999999999999998877777777777654 222 2345544
Q ss_pred cccCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCC-------cEEeCChhHHHHHHHHHhHHHHHHHHHHH
Q 017997 159 LAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPED-------RILTTNLWSAELSKLAANAFLAQRISSVN 231 (362)
Q Consensus 159 ~~~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~~-------~~~~~~~~~ae~~Kl~~N~~~~~~ia~~n 231 (362)
..|..+.. .+ .+++|+. ++..+.++++|+.++. . ..+.+..+.+.+.|++.|.+.+..+..++
T Consensus 141 gg~~~a~~---g~-~i~~gg~-----~~~~~~v~~ll~~~g~-~~~dGe~~v~~~g~~G~g~~~Kl~~N~~~~~~~~~la 210 (480)
T 2zyd_A 141 GGEEGALK---GP-SIMPGGQ-----KEAYELVAPILTKIAA-VAEDGEPCVTYIGADGAGHYVKMVHNGIEYGDMQLIA 210 (480)
T ss_dssp SHHHHHHH---CC-EEEEESC-----HHHHHHHHHHHHHHSC-BCTTSCBSBCCCBSTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCHhHHhc---CC-eEEecCC-----HHHHHHHHHHHHHHhc-cccCCCceEEEECCccHHHHHHHHHHHHHHHHHHHHH
Confidence 33333322 12 5778875 7889999999999863 2 34556789999999999999999999999
Q ss_pred HHHHHHHH-hCCCHHHHHHHh-----c-CCCCC----CCCC--ccCCCCCcccChh-----HhHH-HHHHHHHhCCCchh
Q 017997 232 AMSALCEA-TGANVSQVAFAV-----G-TDSRI----GPKF--LNASVGFGGSCFQ-----KDIL-NLVYICECNGLPEV 292 (362)
Q Consensus 232 E~~~l~~~-~g~d~~~v~~~~-----~-~~~~i----~~~~--~~~g~g~gg~cl~-----kD~~-~l~~~a~~~g~~~~ 292 (362)
|+..++++ +|+|++++.+++ + .++.+ +... -+++.|+--.-+- ||.. .....|++.|++
T Consensus 211 Ea~~l~~~~lGl~~~~~~~l~~~w~~g~~~s~l~~~~~~~l~~~d~~~~~~v~~i~D~~~~k~tG~~~~~~A~~~gv~-- 288 (480)
T 2zyd_A 211 EAYSLLKGGLNLTNEELAQTFTEWNNGELSSYLIDITKDIFTKKDEDGNYLVDVILDEAANKGTGKWTSQSALDLGEP-- 288 (480)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHTTTCBHHHHHHHHHHHCBCTTSSBGGGGBCCCCCCCSCTTHHHHHHHHHTCC--
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHhcCCCcccHHHHHHHHHHhcCCCCCcchHHHHHHHhcCchHHHHHHHHHHHcCCC--
Confidence 99999999 799999999887 2 11110 0000 0112222222111 4433 677889999998
Q ss_pred HHHHHHH
Q 017997 293 AEYWKQV 299 (362)
Q Consensus 293 ~~~~~~~ 299 (362)
.|+++++
T Consensus 289 ~Pi~~~a 295 (480)
T 2zyd_A 289 LSLITES 295 (480)
T ss_dssp CHHHHHH
T ss_pred CchHHHH
Confidence 7777664
No 42
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=99.88 E-value=1.5e-21 Score=192.80 Aligned_cols=249 Identities=12% Similarity=0.159 Sum_probs=181.8
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcC---
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSE--- 78 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~--- 78 (362)
|+|+|||+|.||.++|..|+++ |++|++||+++++++.+.+... ..++..+++++++++.
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~--G~~V~v~dr~~~~~~~l~~~~~---------------~~gi~~~~s~~e~v~~l~~ 68 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESR--GYTVAIYNRTTSKTEEVFKEHQ---------------DKNLVFTKTLEEFVGSLEK 68 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSHHHHHHHHHHTT---------------TSCEEECSSHHHHHHTBCS
T ss_pred CcEEEEeeHHHHHHHHHHHHhC--CCEEEEEcCCHHHHHHHHHhCc---------------CCCeEEeCCHHHHHhhccC
Confidence 6899999999999999999999 9999999999999998875210 0146778888887765
Q ss_pred CcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhccCCCceEEeeCCcc
Q 017997 79 ADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEF 158 (362)
Q Consensus 79 aDvVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~ 158 (362)
+|+||+|||++ ..+.++++++.+.++++++|++.|+..+..++++.+.+++. |.. ++..|..
T Consensus 69 aDvVilavp~~--------------~~v~~vl~~l~~~l~~g~iiId~s~~~~~~~~~l~~~l~~~--g~~--~v~~pv~ 130 (474)
T 2iz1_A 69 PRRIMLMVQAG--------------AATDATIKSLLPLLDIGDILIDGGNTHFPDTMRRNAELADS--GIN--FIGTGVS 130 (474)
T ss_dssp SCEEEECCCTT--------------HHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHTTTS--SCE--EEEEEEC
T ss_pred CCEEEEEccCc--------------hHHHHHHHHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHC--CCe--EECCCCC
Confidence 99999999864 24677888999999999999998887776666666655543 222 2345543
Q ss_pred cccCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCC-------cEEeCChhHHHHHHHHHhHHHHHHHHHHH
Q 017997 159 LAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPED-------RILTTNLWSAELSKLAANAFLAQRISSVN 231 (362)
Q Consensus 159 ~~~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~~-------~~~~~~~~~ae~~Kl~~N~~~~~~ia~~n 231 (362)
..+..+..+ + .+++|+. ++..+.++++|+.++... ..+.++.+.+.+.|+++|.+.+..++.++
T Consensus 131 gg~~~a~~g---~-~i~~gg~-----~~~~~~v~~ll~~~g~~~~~dge~~~~~~g~~g~g~~~Kl~~N~~~~~~~~~la 201 (474)
T 2iz1_A 131 GGEKGALLG---P-SMMPGGQ-----KEAYDLVAPIFEQIAAKAPQDGKPCVAYMGANGAGHYVKMVHNGIEYGDMQLIA 201 (474)
T ss_dssp SHHHHHHHC---C-CEEEEEC-----HHHHHHHHHHHHHHSCBCTTTCCBSBCCCBSTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CChhhhccC---C-eEEecCC-----HHHHHHHHHHHHHHhcccccCCCceEEEECCccHHHHHHHHHhHHHHHHHHHHH
Confidence 333222221 2 3677874 788999999999986320 23456788999999999999999999999
Q ss_pred HHHHHHHH-hCCCHHHHHHHhc---CCCCCCC-------C-Cc--cCCCCCcccChh--------HhHH-HHHHHHHhCC
Q 017997 232 AMSALCEA-TGANVSQVAFAVG---TDSRIGP-------K-FL--NASVGFGGSCFQ--------KDIL-NLVYICECNG 288 (362)
Q Consensus 232 E~~~l~~~-~g~d~~~v~~~~~---~~~~i~~-------~-~~--~~g~g~gg~cl~--------kD~~-~l~~~a~~~g 288 (362)
|+..++++ +|++++++.+++. ... .++ . +. ++.+| ...+. ||.. .....+++.|
T Consensus 202 Ea~~l~~~~~Gl~~~~~~~l~~~w~~g~-~~s~l~~~~~~~l~~~d~~~g--~~~vd~i~D~~~~k~tG~~~~~~A~~~g 278 (474)
T 2iz1_A 202 ESYDLLKRILGLSNAEIQAIFEEWNEGE-LDSYLIEITKEVLKRKDDEGE--GYIVDKILDKAGNKGTGKWTSESALDLG 278 (474)
T ss_dssp HHHHHHHHTSCCCHHHHHHHHHHHTTTT-TCBHHHHHHHHHTTCBCSSSS--SBGGGGBCSCCCCCSHHHHHHHHHHHHT
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHhcCCC-ccccHHHhhhhHhhcCCCCCC--hhHHHHHHHhhcccchHHHHHHHHHHcC
Confidence 99999999 8999999988883 111 110 0 11 12222 12333 6655 5778999999
Q ss_pred CchhHHHHHHH
Q 017997 289 LPEVAEYWKQV 299 (362)
Q Consensus 289 ~~~~~~~~~~~ 299 (362)
++ .|+++++
T Consensus 279 v~--~P~~~~a 287 (474)
T 2iz1_A 279 VP--LPLITES 287 (474)
T ss_dssp CC--CHHHHHH
T ss_pred CC--CchHHHH
Confidence 99 6777664
No 43
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=99.88 E-value=3.2e-22 Score=189.39 Aligned_cols=259 Identities=15% Similarity=0.158 Sum_probs=178.9
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcE
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (362)
|||+|||+|.||+++|..|+++ ||+|++||+++++++.+++.+...++++.. . ++.+++++++ ++++|+
T Consensus 15 ~kI~iIG~G~mG~ala~~L~~~--G~~V~~~~r~~~~~~~l~~~g~~~~~~~~~-------~-~~~~~~~~~~-~~~aDv 83 (335)
T 1z82_A 15 MRFFVLGAGSWGTVFAQMLHEN--GEEVILWARRKEIVDLINVSHTSPYVEESK-------I-TVRATNDLEE-IKKEDI 83 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSHHHHHHHHHHSCBTTBTTCC-------C-CSEEESCGGG-CCTTEE
T ss_pred CcEEEECcCHHHHHHHHHHHhC--CCeEEEEeCCHHHHHHHHHhCCcccCCCCe-------e-eEEEeCCHHH-hcCCCE
Confidence 7999999999999999999999 999999999999999998744322334332 0 3677888888 899999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEee-CCccccHHHHHHHHHhccCCCceEEeeCCcccc
Q 017997 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKS-TVPVKTAEAIEKILTHNSKGIKFQILSNPEFLA 160 (362)
Q Consensus 82 Vii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~S-Tv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~~~ 160 (362)
||+|||++ ++.++++++.+ ++++|+..+ ++.+.+.+.+.+.+.+... .++.+..+|.+..
T Consensus 84 Vil~vk~~---------------~~~~v~~~l~~---~~~~vv~~~nGi~~~~~~~l~~~~~~~~~-~~~~~~~~P~~~~ 144 (335)
T 1z82_A 84 LVIAIPVQ---------------YIREHLLRLPV---KPSMVLNLSKGIEIKTGKRVSEIVEEILG-CPYAVLSGPSHAE 144 (335)
T ss_dssp EEECSCGG---------------GHHHHHTTCSS---CCSEEEECCCCCCTTTCCCHHHHHHHHTC-CCEEEEESSCCHH
T ss_pred EEEECCHH---------------HHHHHHHHhCc---CCCEEEEEeCCCCCCccCcHHHHHHHHcC-CceEEEECCccHH
Confidence 99999842 35666666544 678888777 4777666666666654322 2345667776654
Q ss_pred cCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCcEEeCChhHHHHHHHHHhH-----------------HH
Q 017997 161 EGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANA-----------------FL 223 (362)
Q Consensus 161 ~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ae~~Kl~~N~-----------------~~ 223 (362)
+... ..+..+++|+. + .+.++++|+..+. ..+...|+...+|.|++-|. ++
T Consensus 145 ~~~~----g~~~~~~~g~~-----~--~~~~~~ll~~~g~-~~~~~~di~~~~~~k~l~N~~~~~~g~~~g~~~~~n~~~ 212 (335)
T 1z82_A 145 EVAK----KLPTAVTLAGE-----N--SKELQKRISTEYF-RVYTCEDVVGVEIAGALKNVIAIAAGILDGFGGWDNAKA 212 (335)
T ss_dssp HHHT----TCCEEEEEEET-----T--HHHHHHHHCCSSE-EEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred HHhC----CCceEEEEEeh-----h--HHHHHHHhCCCCE-EEEecCchHHHHHHHHHHhHHHHHHHHHhcCCCCchhHH
Confidence 3221 22334556644 2 6788999998652 23445788888888766554 45
Q ss_pred HHHHHHHHHHHHHHHHhCCCHHHHHHHhcC--------CC--C---CCCCCccCCCCCc------ccCh--hHhHHHHHH
Q 017997 224 AQRISSVNAMSALCEATGANVSQVAFAVGT--------DS--R---IGPKFLNASVGFG------GSCF--QKDILNLVY 282 (362)
Q Consensus 224 ~~~ia~~nE~~~l~~~~g~d~~~v~~~~~~--------~~--~---i~~~~~~~g~g~g------g~cl--~kD~~~l~~ 282 (362)
++..++++|+..++++.|+|++++.++.+. ++ + ++..+ ..|..+. |.+. .||..++.+
T Consensus 213 a~~~~~~~E~~~la~a~G~~~~~~~~l~~~~~~~~t~~s~~~~n~~~~~~~-~~g~~~~~~~~~~g~~~e~~~~~~~v~~ 291 (335)
T 1z82_A 213 ALETRGIYEIARFGMFFGADQKTFMGLAGIGDLMVTCNSRYSRNRRFGELI-ARGFNPLKLLESSNQVVEGAFTVKAVMK 291 (335)
T ss_dssp HHHHHHHHHHHHHHHHTTCCHHHHTSTTTHHHHHHHHHCTTCHHHHHHHHH-HHTCCHHHHHHTCSSCCTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCChhhhcccccccceeeeccCccCcHHHHHHHH-hCCCCHHHHHHhcCCeeeHHHHHHHHHH
Confidence 778899999999999999999887543211 11 0 01000 0011111 3333 599999999
Q ss_pred HHHhCCCchhHHHHHHHHHHHHH
Q 017997 283 ICECNGLPEVAEYWKQVIKINDY 305 (362)
Q Consensus 283 ~a~~~g~~~~~~~~~~~~~~N~~ 305 (362)
+++++|++ .|+.+++.++...
T Consensus 292 ~a~~~gv~--~P~~~~v~~~~~~ 312 (335)
T 1z82_A 292 IAKENKID--MPISEEVYRVVYE 312 (335)
T ss_dssp HHHHTTCC--CHHHHHHHHHHHS
T ss_pred HHHHhCCC--CcHHHHHHHHHhC
Confidence 99999999 8888888877653
No 44
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=99.88 E-value=2.2e-21 Score=181.31 Aligned_cols=268 Identities=13% Similarity=0.099 Sum_probs=173.8
Q ss_pred CceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhh---hc
Q 017997 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKH---VS 77 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a---~~ 77 (362)
||||+|||+|.||.++|..|+++ ||+|++||+++++++.+++........+. . ...++.++++ .++ ++
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~r~~~~~~~~~~~g~~~~~~~~-~-----~~~~~~~~~~-~~~~~~~~ 73 (316)
T 2ew2_A 3 AMKIAIAGAGAMGSRLGIMLHQG--GNDVTLIDQWPAHIEAIRKNGLIADFNGE-E-----VVANLPIFSP-EEIDHQNE 73 (316)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHCEEEEETTE-E-----EEECCCEECG-GGCCTTSC
T ss_pred CCeEEEECcCHHHHHHHHHHHhC--CCcEEEEECCHHHHHHHHhCCEEEEeCCC-e-----eEecceeecc-hhhcccCC
Confidence 58999999999999999999999 99999999999999988764322111000 0 0012233332 232 34
Q ss_pred CCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhccCCCceEEeeCCc
Q 017997 78 EADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPE 157 (362)
Q Consensus 78 ~aDvVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe 157 (362)
++|+||+|||++ .+.++++++.+.++++++|+..++ ..++.+.+.+.+.+... ..-......+
T Consensus 74 ~~d~vi~~v~~~---------------~~~~v~~~l~~~l~~~~~iv~~~~-g~~~~~~l~~~~~~~~v-i~g~~~~~~~ 136 (316)
T 2ew2_A 74 QVDLIIALTKAQ---------------QLDAMFKAIQPMITEKTYVLCLLN-GLGHEDVLEKYVPKENI-LVGITMWTAG 136 (316)
T ss_dssp CCSEEEECSCHH---------------HHHHHHHHHGGGCCTTCEEEECCS-SSCTHHHHTTTSCGGGE-EEEEECCCCE
T ss_pred CCCEEEEEeccc---------------cHHHHHHHHHHhcCCCCEEEEecC-CCCcHHHHHHHcCCccE-EEEEeeeeeE
Confidence 899999999842 357888999999999998887655 33444555444433210 0001112344
Q ss_pred ccccCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCcEEeCChhHHHHHHHHHhHH---------------
Q 017997 158 FLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAF--------------- 222 (362)
Q Consensus 158 ~~~~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ae~~Kl~~N~~--------------- 222 (362)
+.+|+..... ... .+.++... ..+++..+.++++|+..+. ..+...|+..++|.|++.|..
T Consensus 137 ~~~p~~~~~~-~~g-~~~i~~~~-~~~~~~~~~~~~ll~~~g~-~~~~~~d~~~~~~~Kl~~N~~~~~~~al~~~~~~~~ 212 (316)
T 2ew2_A 137 LEGPGRVKLL-GDG-EIELENID-PSGKKFALEVVDVFQKAGL-NPSYSSNVRYSIWRKACVNGTLNGLCTILDCNIAEF 212 (316)
T ss_dssp EEETTEEEEC-SCC-CEEEEESS-GGGHHHHHHHHHHHHHTTC-CEEECTTHHHHHHHHHHHHTTHHHHHHHHTCCHHHH
T ss_pred EcCCCEEEEe-cCC-cEEEeecC-CCccHHHHHHHHHHHhCCC-CcEEchhHHHHHHHHHHHhhhHHHHHHHhCCcHHHH
Confidence 5556554332 222 23344321 1246788999999999863 344567999999999999964
Q ss_pred ------HHHHHHHHHHHHHHHHHhCCCH--HHHHHHhcC--CCC-CCCCC----ccC-CCCCcccChhHhHHHHHHHHHh
Q 017997 223 ------LAQRISSVNAMSALCEATGANV--SQVAFAVGT--DSR-IGPKF----LNA-SVGFGGSCFQKDILNLVYICEC 286 (362)
Q Consensus 223 ------~~~~ia~~nE~~~l~~~~g~d~--~~v~~~~~~--~~~-i~~~~----~~~-g~g~gg~cl~kD~~~l~~~a~~ 286 (362)
+.+..+.++|+..+++++|+++ ..+.+.+.. .+. .+.+. .+. ..|+-.. +.+|..++.+.+++
T Consensus 213 ~~~~~~~~~~~~~~~E~~~la~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~sm~~d~~~~g~~~E-~~~~~~~~~~~a~~ 291 (316)
T 2ew2_A 213 GALPVSESLVKTLISEFAAVAEKEAIYLDQAEVYTHIVQTYDPNGIGLHYPSMYQDLIKNHRLTE-IDYINGAVWRKGQK 291 (316)
T ss_dssp HTSTTHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHTTCTTTTTTSCCHHHHHHTTTCCCCS-GGGTHHHHHHHHHH
T ss_pred HhCHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHhccccCCCCCcHHHHHHHHcCCcch-HHHHhhHHHHHHHH
Confidence 3667899999999999999986 455555432 110 01111 111 3455445 79999999999999
Q ss_pred CCCchhHHHHHHHHH
Q 017997 287 NGLPEVAEYWKQVIK 301 (362)
Q Consensus 287 ~g~~~~~~~~~~~~~ 301 (362)
+|++ .|+++.+.+
T Consensus 292 ~gv~--~P~~~~~~~ 304 (316)
T 2ew2_A 292 YNVA--TPFCAMLTQ 304 (316)
T ss_dssp HTCC--CHHHHHHHH
T ss_pred hCCC--CCHHHHHHH
Confidence 9999 777665544
No 45
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=99.81 E-value=2e-19 Score=162.71 Aligned_cols=197 Identities=14% Similarity=0.148 Sum_probs=129.9
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHH--HHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCC
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSR--INAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEA 79 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~--~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~a 79 (362)
|||+|||+|.||.++|..|+++ ||+|++||+++++ .+...... ......++... .+... ++++.+++++|
T Consensus 20 ~kIgiIG~G~mG~alA~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~~--~~~~~-~~~~~e~~~~a 91 (245)
T 3dtt_A 20 MKIAVLGTGTVGRTMAGALADL--GHEVTIGTRDPKATLARAEPDAM---GAPPFSQWLPE--HPHVH-LAAFADVAAGA 91 (245)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHTCC----------CCHHHHGGG--STTCE-EEEHHHHHHHC
T ss_pred CeEEEECCCHHHHHHHHHHHHC--CCEEEEEeCChhhhhhhhhhhhh---cchhhhHHHhh--cCcee-ccCHHHHHhcC
Confidence 7999999999999999999999 9999999999987 11100000 00001111111 12233 45667778999
Q ss_pred cEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHH-HhhcCCCCEEEEee-----------CCccccHHHHHHHHHhccCC
Q 017997 80 DIVFVSVNTPTKTQGLGAGKAADLTYWESAARVI-ADVSKSDKIVVEKS-----------TVPVKTAEAIEKILTHNSKG 147 (362)
Q Consensus 80 DvVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i-~~~l~~~~iVv~~S-----------Tv~~gt~~~l~~~l~~~~~g 147 (362)
|+||+|||++ .+.+++.++ .+.+ ++++||+.| |+.|.+...+.+.+++..++
T Consensus 92 DvVilavp~~---------------~~~~~~~~i~~~~l-~g~ivi~~s~~~~~~~G~~~t~~~~~~~~~~~~l~~~l~~ 155 (245)
T 3dtt_A 92 ELVVNATEGA---------------SSIAALTAAGAENL-AGKILVDIANPLDFSHGMPPTLNPVNTDSLGEQIQRTFPE 155 (245)
T ss_dssp SEEEECSCGG---------------GHHHHHHHHCHHHH-TTSEEEECCCCEECTTCSSCEESSCSSCCHHHHHHHHSTT
T ss_pred CEEEEccCcH---------------HHHHHHHHhhhhhc-CCCEEEECCCCCCCcCCccccccCCCCccHHHHHHHHCCC
Confidence 9999999853 234566677 6666 789999988 77777665555555443211
Q ss_pred C----ceEEeeCCcccccCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCcEEeCChhHHHHHHHHHhHHH
Q 017997 148 I----KFQILSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFL 223 (362)
Q Consensus 148 ~----~~~v~~~Pe~~~~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ae~~Kl~~N~~~ 223 (362)
. .+..+.+|....+..+... +..+++++.+ +++.+.++++|+.++....++.++++.+..+|++.|.+.
T Consensus 156 ~~vv~~~~~~~a~v~~~~~~a~~g---~~~~~v~g~d----~~~~~~v~~ll~~~g~~~~~~~G~~g~a~~~k~~~~~~~ 228 (245)
T 3dtt_A 156 AKVVKTLNTMNASLMVDPGRAAGG---DHSVFVSGND----AAAKAEVATLLKSLGHQDVIDLGDITTARGAEMLLPVWI 228 (245)
T ss_dssp SEEEECSTTSCHHHHHCGGGTGGG---CCCEEEECSC----HHHHHHHHHHHHHTTCCCEEEEESGGGHHHHHTTHHHHH
T ss_pred CeEEEeecccCHHHhcCccccCCC---CeeEEEECCC----HHHHHHHHHHHHHcCCCceeccCcHHHHHHhhhhHHHHH
Confidence 1 1223445555444433211 2236677663 789999999999987312366789999999999999998
Q ss_pred HHHHHH
Q 017997 224 AQRISS 229 (362)
Q Consensus 224 ~~~ia~ 229 (362)
.+++++
T Consensus 229 ~l~~~~ 234 (245)
T 3dtt_A 229 RLWGAL 234 (245)
T ss_dssp HHHHHH
T ss_pred HHHHHc
Confidence 877553
No 46
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=99.81 E-value=2.1e-17 Score=152.27 Aligned_cols=196 Identities=15% Similarity=0.173 Sum_probs=143.5
Q ss_pred CceEEEEcCChhHHHHHHHHHHcCCCC--eEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhc-
Q 017997 1 MVKICCIGAGYVGGPTMAVIALKCPSI--EVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS- 77 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~la~~~~G~--~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~- 77 (362)
||||+|||+|.||..+|..|++. |+ +|++||+++++++.+++... ....+++++++++
T Consensus 1 m~~I~iIG~G~mG~~~a~~l~~~--g~~~~V~~~d~~~~~~~~~~~~g~-----------------~~~~~~~~~~~~~~ 61 (281)
T 2g5c_A 1 MQNVLIVGVGFMGGSFAKSLRRS--GFKGKIYGYDINPESISKAVDLGI-----------------IDEGTTSIAKVEDF 61 (281)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHT--TCCSEEEEECSCHHHHHHHHHTTS-----------------CSEEESCGGGGGGT
T ss_pred CcEEEEEecCHHHHHHHHHHHhc--CCCcEEEEEeCCHHHHHHHHHCCC-----------------cccccCCHHHHhcC
Confidence 78999999999999999999998 88 99999999999887764210 0134567777788
Q ss_pred CCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhccCCCceEEeeCCc
Q 017997 78 EADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPE 157 (362)
Q Consensus 78 ~aDvVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe 157 (362)
++|+||+|||.+ .+.++++++.+.++++++|++.+++.+.+.+.+.+.+.+.. ...+-...|+
T Consensus 62 ~aDvVilavp~~---------------~~~~v~~~l~~~l~~~~iv~~~~~~~~~~~~~l~~~l~~~~--v~~~p~~~~~ 124 (281)
T 2g5c_A 62 SPDFVMLSSPVR---------------TFREIAKKLSYILSEDATVTDQGSVKGKLVYDLENILGKRF--VGGHPIAGTE 124 (281)
T ss_dssp CCSEEEECSCHH---------------HHHHHHHHHHHHSCTTCEEEECCSCCTHHHHHHHHHHGGGE--ECEEEECCCS
T ss_pred CCCEEEEcCCHH---------------HHHHHHHHHHhhCCCCcEEEECCCCcHHHHHHHHHhccccc--eeeccccCCc
Confidence 999999999842 34677888888899999998888887766677776665410 0111123445
Q ss_pred ccccCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCcEEe-CChhHHHHHHHHHhHHHHHHHHHHHHHHH
Q 017997 158 FLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILT-TNLWSAELSKLAANAFLAQRISSVNAMSA 235 (362)
Q Consensus 158 ~~~~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~ 235 (362)
..+|+.+..+++....+++... ...+++..+.++++|+.++ .+++. .+....+++|++.|....+.+++++.+..
T Consensus 125 ~~gp~~a~~~l~~g~~~~~~~~-~~~~~~~~~~v~~l~~~~g--~~~~~~~~~~~d~~~~~~~~~~~~~a~~~~~~~~~ 200 (281)
T 2g5c_A 125 KSGVEYSLDNLYEGKKVILTPT-KKTDKKRLKLVKRVWEDVG--GVVEYMSPELHDYVFGVVSHLPHAVAFALVDTLIH 200 (281)
T ss_dssp CCSGGGCCSSTTTTCEEEECCC-SSSCHHHHHHHHHHHHHTT--CEEEECCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred cCChhhhhhHHhCCCCEEEecC-CCCCHHHHHHHHHHHHHcC--CEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5567777666666654545421 1124788999999999986 34544 45566899999999988878888887765
No 47
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=99.80 E-value=1e-18 Score=163.62 Aligned_cols=206 Identities=13% Similarity=0.100 Sum_probs=139.8
Q ss_pred CceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcC------------CCCCCCCChHHHHhhhcCCCEEE
Q 017997 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSD------------QLPIYEPGLDGVVKQCRGKNLFF 68 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~------------~~~~~e~~l~~~~~~~~~~~l~~ 68 (362)
++||+|||+|.||.++|..|+++ ||+|++||+++++++.+.+. ..+-. ...... ..++++
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~--G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~-~~~~~~-----~~~i~~ 77 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASG--GFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGS-LSAEEQ-----LSLISS 77 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT--TCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSS-SCHHHH-----HHTEEE
T ss_pred CceEEEEeeCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccc-cchHHH-----hhceEE
Confidence 36899999999999999999999 99999999999998877531 11000 000111 135889
Q ss_pred ecCHHhhhcCCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEE-EeeCCccccHHHHHHHHHhccCC
Q 017997 69 STDVEKHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVV-EKSTVPVKTAEAIEKILTHNSKG 147 (362)
Q Consensus 69 t~d~~~a~~~aDvVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv-~~STv~~gt~~~l~~~l~~~~~g 147 (362)
++|+++++++||+||+|||+.. .....+++++.++++++++|+ ++|++++. .+.+.+....
T Consensus 78 ~~~~~eav~~aDlVieavpe~~-------------~~k~~v~~~l~~~~~~~~Ii~s~tS~i~~~---~la~~~~~~~-- 139 (319)
T 2dpo_A 78 CTNLAEAVEGVVHIQECVPENL-------------DLKRKIFAQLDSIVDDRVVLSSSSSCLLPS---KLFTGLAHVK-- 139 (319)
T ss_dssp ECCHHHHTTTEEEEEECCCSCH-------------HHHHHHHHHHHTTCCSSSEEEECCSSCCHH---HHHTTCTTGG--
T ss_pred eCCHHHHHhcCCEEEEeccCCH-------------HHHHHHHHHHHhhCCCCeEEEEeCCChHHH---HHHHhcCCCC--
Confidence 9999988999999999998532 234677889999999999885 45556553 3333222111
Q ss_pred CceEEee---CCcccccCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCcEEeCChhHHHHHHHHHhHHHH
Q 017997 148 IKFQILS---NPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLA 224 (362)
Q Consensus 148 ~~~~v~~---~Pe~~~~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ae~~Kl~~N~~~~ 224 (362)
. ++.. +|....+ ...++ .+..+ +++++++++++|+.++ +.++++..-..+ ++.|.+
T Consensus 140 -r-~ig~Hp~~P~~~~~---------lveiv-~g~~t--~~e~~~~~~~l~~~lG-k~~v~v~~~~~G----fi~Nrl-- 198 (319)
T 2dpo_A 140 -Q-CIVAHPVNPPYYIP---------LVELV-PHPET--SPATVDRTHALMRKIG-QSPVRVLKEIDG----FVLNRL-- 198 (319)
T ss_dssp -G-EEEEEECSSTTTCC---------EEEEE-ECTTC--CHHHHHHHHHHHHHTT-CEEEECSSCCTT----TTHHHH--
T ss_pred -C-eEEeecCCchhhcc---------eEEEe-CCCCC--CHHHHHHHHHHHHHcC-CEEEEECCCcCC----chHHHH--
Confidence 1 2222 3332211 11244 44333 5899999999999997 345655321111 244553
Q ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHhcCC
Q 017997 225 QRISSVNAMSALCEATGANVSQVAFAVGTD 254 (362)
Q Consensus 225 ~~ia~~nE~~~l~~~~g~d~~~v~~~~~~~ 254 (362)
..++++|...++++.++|++++.+++...
T Consensus 199 -l~a~~~EA~~l~~~g~~~~~~id~a~~~g 227 (319)
T 2dpo_A 199 -QYAIISEAWRLVEEGIVSPSDLDLVMSDG 227 (319)
T ss_dssp -HHHHHHHHHHHHHTTSSCHHHHHHHHHTT
T ss_pred -HHHHHHHHHHHHHhCCCCHHHHHHHHHhC
Confidence 34789999999999999999999999764
No 48
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=99.80 E-value=5.1e-19 Score=163.40 Aligned_cols=192 Identities=21% Similarity=0.261 Sum_probs=135.2
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcE
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (362)
+||+|||+|.||.+||.+|+ + |++|++||+++++++++.+. + .++ ..+++++++|+++ +++||+
T Consensus 13 ~~V~vIG~G~MG~~iA~~la-a--G~~V~v~d~~~~~~~~~~~~---l----~~~-----~~~~i~~~~~~~~-~~~aDl 76 (293)
T 1zej_A 13 MKVFVIGAGLMGRGIAIAIA-S--KHEVVLQDVSEKALEAAREQ---I----PEE-----LLSKIEFTTTLEK-VKDCDI 76 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHH-T--TSEEEEECSCHHHHHHHHHH---S----CGG-----GGGGEEEESSCTT-GGGCSE
T ss_pred CeEEEEeeCHHHHHHHHHHH-c--CCEEEEEECCHHHHHHHHHH---H----HHH-----HhCCeEEeCCHHH-HcCCCE
Confidence 68999999999999999999 8 99999999999999887653 1 011 1235888899876 899999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEE-EEeeCCccccHHHHHHHHHhcc--CCCceEEeeCCcc
Q 017997 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIV-VEKSTVPVKTAEAIEKILTHNS--KGIKFQILSNPEF 158 (362)
Q Consensus 82 Vii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iV-v~~STv~~gt~~~l~~~l~~~~--~g~~~~v~~~Pe~ 158 (362)
||.|+|.+. +++ ...+.++.+. +++++ +++||+++..... .+.... .|.+| ++|.+
T Consensus 77 Vieavpe~~-----------~vk--~~l~~~l~~~--~~~IlasntSti~~~~~a~---~~~~~~r~~G~Hf---~~Pv~ 135 (293)
T 1zej_A 77 VMEAVFEDL-----------NTK--VEVLREVERL--TNAPLCSNTSVISVDDIAE---RLDSPSRFLGVHW---MNPPH 135 (293)
T ss_dssp EEECCCSCH-----------HHH--HHHHHHHHTT--CCSCEEECCSSSCHHHHHT---TSSCGGGEEEEEE---CSSTT
T ss_pred EEEcCcCCH-----------HHH--HHHHHHHhcC--CCCEEEEECCCcCHHHHHH---HhhcccceEeEEe---cCccc
Confidence 999998642 222 3455666665 88887 5788988864322 111111 13232 24643
Q ss_pred cccCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCcEEeCChhHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Q 017997 159 LAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRISSVNAMSALCE 238 (362)
Q Consensus 159 ~~~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~~ 238 (362)
..+ ...++ .+..+ +++++++++++++.++ +.++++.+. |+++|.+ .++++|...+++
T Consensus 136 ~~~---------lveiv-~g~~t--~~~~~~~~~~l~~~lG-k~~v~v~d~------fi~Nrll----~~~~~EA~~l~~ 192 (293)
T 1zej_A 136 VMP---------LVEIV-ISRFT--DSKTVAFVEGFLRELG-KEVVVCKGQ------SLVNRFN----AAVLSEASRMIE 192 (293)
T ss_dssp TCC---------EEEEE-ECTTC--CHHHHHHHHHHHHHTT-CEEEEEESS------CHHHHHH----HHHHHHHHHHHH
T ss_pred cCC---------EEEEE-CCCCC--CHHHHHHHHHHHHHcC-CeEEEeccc------ccHHHHH----HHHHHHHHHHHH
Confidence 321 11244 44323 4899999999999987 345666653 6666654 378999999999
Q ss_pred HhCCCHHHHHHHhcCC
Q 017997 239 ATGANVSQVAFAVGTD 254 (362)
Q Consensus 239 ~~g~d~~~v~~~~~~~ 254 (362)
+ |+|++++.+++...
T Consensus 193 ~-Gv~~e~id~~~~~g 207 (293)
T 1zej_A 193 E-GVRAEDVDRVWKHH 207 (293)
T ss_dssp H-TCCHHHHHHHHHTT
T ss_pred h-CCCHHHHHHHHHhc
Confidence 9 88999999999753
No 49
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=99.79 E-value=1.4e-18 Score=171.42 Aligned_cols=209 Identities=17% Similarity=0.196 Sum_probs=142.0
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCC----CCCCCCC-hHHHHhhhcCCCEEEecCHHhhh
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQ----LPIYEPG-LDGVVKQCRGKNLFFSTDVEKHV 76 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~----~~~~e~~-l~~~~~~~~~~~l~~t~d~~~a~ 76 (362)
+||+|||+|.||.+||..|+++ |++|++||+++++++.+.+.. ....+.+ +...-......++++++|++ ++
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~a--G~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~-~~ 82 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASH--GHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPVTDIH-AL 82 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT--TCCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEECCGG-GG
T ss_pred CEEEEECcCHHHHHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEeCCHH-Hh
Confidence 5899999999999999999999 999999999999998765310 0000001 00000000123688899986 59
Q ss_pred cCCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEE-EEeeCCccccHHHHHHHHHhccC--CCceEEe
Q 017997 77 SEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIV-VEKSTVPVKTAEAIEKILTHNSK--GIKFQIL 153 (362)
Q Consensus 77 ~~aDvVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iV-v~~STv~~gt~~~l~~~l~~~~~--g~~~~v~ 153 (362)
++||+||+|||+.. ....++++++.+.+++++++ +++||+++.. +...+..... |.+|
T Consensus 83 ~~aDlVIeAVpe~~-------------~vk~~v~~~l~~~~~~~~IlasntSti~i~~---ia~~~~~p~~~ig~hf--- 143 (483)
T 3mog_A 83 AAADLVIEAASERL-------------EVKKALFAQLAEVCPPQTLLTTNTSSISITA---IAAEIKNPERVAGLHF--- 143 (483)
T ss_dssp GGCSEEEECCCCCH-------------HHHHHHHHHHHHHSCTTCEEEECCSSSCHHH---HTTTSSSGGGEEEEEE---
T ss_pred cCCCEEEEcCCCcH-------------HHHHHHHHHHHHhhccCcEEEecCCCCCHHH---HHHHccCccceEEeee---
Confidence 99999999998532 23367888999999999988 5788888742 2222211110 2221
Q ss_pred eCCcccccCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCcEEeCChhHHHHHHHHHhHHHHHHHHHHHHH
Q 017997 154 SNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRISSVNAM 233 (362)
Q Consensus 154 ~~Pe~~~~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~ 233 (362)
++|.... .. ..++++..+ ++++++.+.++++.++ +.++++.+... |+++|.+. +++||.
T Consensus 144 ~~Pa~v~---------~L-vevv~g~~T--s~e~~~~~~~l~~~lG-k~~v~v~d~~G----fi~Nr~l~----~~~~Ea 202 (483)
T 3mog_A 144 FNPAPVM---------KL-VEVVSGLAT--AAEVVEQLCELTLSWG-KQPVRCHSTPG----FIVNRVAR----PYYSEA 202 (483)
T ss_dssp CSSTTTC---------CE-EEEEECSSC--CHHHHHHHHHHHHHTT-CEEEEEESCTT----TTHHHHTH----HHHHHH
T ss_pred cChhhhC---------Ce-EEEecCCCC--CHHHHHHHHHHHHHhC-CEEEEEeccCc----chHHHHHH----HHHHHH
Confidence 3443322 11 234565533 5889999999999987 35666665432 55555543 489999
Q ss_pred HHHHHHhCCCHHHHHHHhcC
Q 017997 234 SALCEATGANVSQVAFAVGT 253 (362)
Q Consensus 234 ~~l~~~~g~d~~~v~~~~~~ 253 (362)
..++++.++|++++.+++..
T Consensus 203 ~~l~~~g~~~~~~id~a~~~ 222 (483)
T 3mog_A 203 WRALEEQVAAPEVIDAALRD 222 (483)
T ss_dssp HHHHHTTCSCHHHHHHHHHH
T ss_pred HHHHHhCCCCHHHHHHHHHh
Confidence 99999999999999999974
No 50
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=99.78 E-value=5.1e-19 Score=163.40 Aligned_cols=256 Identities=14% Similarity=0.126 Sum_probs=161.6
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcE
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (362)
|||+|||+|.||.++|..|+++ ||+|++||+++++++.++.... .+. .. ...+. +++. ++++++|+
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~r~~~~~~~l~~~~~----~~~-~~-----~~~~~-~~~~-~~~~~~d~ 66 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQ--GHEVQGWLRVPQPYCSVNLVET----DGS-IF-----NESLT-ANDP-DFLATSDL 66 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCSEEEEEEECT----TSC-EE-----EEEEE-ESCH-HHHHTCSE
T ss_pred CeEEEECcCHHHHHHHHHHHhC--CCCEEEEEcCccceeeEEEEcC----CCc-ee-----eeeee-ecCc-cccCCCCE
Confidence 7999999999999999999999 9999999999876554432110 000 00 00122 2444 45889999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhccCCCc--eEEeeCCccc
Q 017997 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIK--FQILSNPEFL 159 (362)
Q Consensus 82 Vii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~~~g~~--~~v~~~Pe~~ 159 (362)
||+|||++ .+.++++++.+.++++++|+..++ ..++.+.+.+.+.+...|.. .....+| .
T Consensus 67 vi~~v~~~---------------~~~~v~~~l~~~l~~~~~vv~~~~-g~~~~~~l~~~~~~~~~g~~~~~~~~~~p-~- 128 (291)
T 1ks9_A 67 LLVTLKAW---------------QVSDAVKSLASTLPVTTPILLIHN-GMGTIEELQNIQQPLLMGTTTHAARRDGN-V- 128 (291)
T ss_dssp EEECSCGG---------------GHHHHHHHHHTTSCTTSCEEEECS-SSCTTGGGTTCCSCEEEEEECCEEEEETT-E-
T ss_pred EEEEecHH---------------hHHHHHHHHHhhCCCCCEEEEecC-CCCcHHHHHHhcCCeEEEEEeEccEEcCC-E-
Confidence 99999853 257888899999998888876544 34554444333322000100 0112344 2
Q ss_pred ccCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCcEEeCChhHHHHHHHHHhHHH----------------
Q 017997 160 AEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFL---------------- 223 (362)
Q Consensus 160 ~~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ae~~Kl~~N~~~---------------- 223 (362)
. ...... ++.+|.... +++..+.++++|+..+. ..++..|+..+.|.|++.|+..
T Consensus 129 ----~-~~~~~g-~~~i~~~~~--~~~~~~~~~~ll~~~g~-~~~~~~~~~~~~~~Kl~~n~~~n~~tal~~~~~g~~~~ 199 (291)
T 1ks9_A 129 ----I-IHVANG-ITHIGPARQ--QDGDYSYLADILQTVLP-DVAWHNNIRAELWRKLAVNCVINPLTAIWNCPNGELRH 199 (291)
T ss_dssp ----E-EEEECC-CEEEEESSG--GGTTCTHHHHHHHTTSS-CEEECTTHHHHHHHHHHHHHHHHHHHHHTTCCGGGGGG
T ss_pred ----E-EEeccc-ceEEccCCC--CcchHHHHHHHHHhcCC-CCeecHHHHHHHHHHHeeeeeecHHHHHHCCCchHHHh
Confidence 1 111222 244554221 24567889999998863 3445679999999999999987
Q ss_pred --HHHHHHHHHHHHHHHHhCCCH--HHH----HHHhcCCC-CCCCCCccCCCCCcccChhHhHHHHHHHHHhCCCchhHH
Q 017997 224 --AQRISSVNAMSALCEATGANV--SQV----AFAVGTDS-RIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVAE 294 (362)
Q Consensus 224 --~~~ia~~nE~~~l~~~~g~d~--~~v----~~~~~~~~-~i~~~~~~~g~g~gg~cl~kD~~~l~~~a~~~g~~~~~~ 294 (362)
++..+.++|+..++++.|+++ .++ .+.+...+ ...+.+.+...|... -+-.+..++.+.++++|++ .|
T Consensus 200 ~~~~~~~~~~E~~~va~a~G~~~~~~~~~~~~~~~~~~~~~~~ssm~~d~~~g~~~-e~~~~~g~~~~~a~~~gv~--~P 276 (291)
T 1ks9_A 200 HPQEIMQICEEVAAVIEREGHHTSAEDLRDYVMQVIDATAENISSMLQDIRALRHT-EIDYINGFLLRRARAHGIA--VP 276 (291)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHTTTCCCHHHHHHHTTCCC-SGGGTHHHHHHHHHHHTCC--CH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCCCCChHHHHHHcCCcc-HHHHHHHHHHHHHHHhCCC--CC
Confidence 788899999999999999986 444 33333211 111111111122221 2346788999999999999 77
Q ss_pred HHHHHHH
Q 017997 295 YWKQVIK 301 (362)
Q Consensus 295 ~~~~~~~ 301 (362)
+.+.+.+
T Consensus 277 ~~~~~~~ 283 (291)
T 1ks9_A 277 ENTRLFE 283 (291)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6665443
No 51
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=99.78 E-value=5.4e-18 Score=165.17 Aligned_cols=202 Identities=19% Similarity=0.232 Sum_probs=137.5
Q ss_pred CceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHH--------HH-HcCCCCCCCCChHHHHhhhcCCCEEEecC
Q 017997 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRIN--------AW-NSDQLPIYEPGLDGVVKQCRGKNLFFSTD 71 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~--------~l-~~~~~~~~e~~l~~~~~~~~~~~l~~t~d 71 (362)
|+||+|||+|.||.+||..|+++ |++|++||+++++.. .+ .+|... +...+. ...++++++|
T Consensus 54 i~kVaVIGaG~MG~~IA~~la~a--G~~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~--~~~~~~-----~~~~i~~t~d 124 (460)
T 3k6j_A 54 VNSVAIIGGGTMGKAMAICFGLA--GIETFLVVRNEQRCKQELEVMYAREKSFKRLN--DKRIEK-----INANLKITSD 124 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHHHHHHHHTTSCC--HHHHHH-----HHTTEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHHC--CCeEEEEECcHHHHHHHHHHHHHHHHHcCCCC--HHHHHH-----HhcceEEeCC
Confidence 47999999999999999999999 999999999998432 11 222111 000011 1256899999
Q ss_pred HHhhhcCCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEE-EEeeCCccccHHHHHHHHHhccC--CC
Q 017997 72 VEKHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIV-VEKSTVPVKTAEAIEKILTHNSK--GI 148 (362)
Q Consensus 72 ~~~a~~~aDvVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iV-v~~STv~~gt~~~l~~~l~~~~~--g~ 148 (362)
++ ++++||+||+|||+.. .....+++++.+.++++++| .++||+++. .+...+..... |.
T Consensus 125 l~-al~~aDlVIeAVpe~~-------------~vk~~v~~~l~~~~~~~aIlasnTSsl~i~---~ia~~~~~p~r~iG~ 187 (460)
T 3k6j_A 125 FH-KLSNCDLIVESVIEDM-------------KLKKELFANLENICKSTCIFGTNTSSLDLN---EISSVLRDPSNLVGI 187 (460)
T ss_dssp GG-GCTTCSEEEECCCSCH-------------HHHHHHHHHHHTTSCTTCEEEECCSSSCHH---HHHTTSSSGGGEEEE
T ss_pred HH-HHccCCEEEEcCCCCH-------------HHHHHHHHHHHhhCCCCCEEEecCCChhHH---HHHHhccCCcceEEE
Confidence 86 5999999999998532 23367889999999999998 567778764 23222211100 22
Q ss_pred ceEEeeCCcccccCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCcEEeCChhHHHHHHHHHhHHHHHHHH
Q 017997 149 KFQILSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRIS 228 (362)
Q Consensus 149 ~~~v~~~Pe~~~~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ae~~Kl~~N~~~~~~ia 228 (362)
+| ++|....+ ...|+ .+..+ ++++++++.++++.++ +.++++.|. .+++.|.+. .+
T Consensus 188 Hf---fnPv~~m~---------LvEIv-~g~~T--s~e~~~~~~~l~~~lG-k~~v~v~d~-----pGfi~Nril---~~ 243 (460)
T 3k6j_A 188 HF---FNPANVIR---------LVEII-YGSHT--SSQAIATAFQACESIK-KLPVLVGNC-----KSFVFNRLL---HV 243 (460)
T ss_dssp EC---CSSTTTCC---------EEEEE-CCSSC--CHHHHHHHHHHHHHTT-CEEEEESSC-----CHHHHHHHH---HH
T ss_pred Ee---cchhhhCC---------EEEEE-eCCCC--CHHHHHHHHHHHHHhC-CEEEEEecc-----cHHHHHHHH---HH
Confidence 22 34543221 11354 44333 5899999999999987 356666652 224566643 47
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHhc
Q 017997 229 SVNAMSALCEATGANVSQVAFAVG 252 (362)
Q Consensus 229 ~~nE~~~l~~~~g~d~~~v~~~~~ 252 (362)
+++|...++++.|+|++++.+++.
T Consensus 244 ~~~EA~~l~~~~Ga~~e~ID~a~~ 267 (460)
T 3k6j_A 244 YFDQSQKLMYEYGYLPHQIDKIIT 267 (460)
T ss_dssp HHHHHHHHHHTSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHH
Confidence 899999999999999999999874
No 52
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=99.78 E-value=1.1e-16 Score=149.85 Aligned_cols=188 Identities=16% Similarity=0.196 Sum_probs=137.2
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCC--eEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCE-EEecCHHh-hhc
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSI--EVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNL-FFSTDVEK-HVS 77 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~--~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l-~~t~d~~~-a~~ 77 (362)
|||+|||+|.||.++|..|.+. |+ +|++||+++++++.+.+. +.+ ..++++++ +++
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~--G~~~~V~~~dr~~~~~~~a~~~------------------G~~~~~~~~~~~~~~~ 93 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRS--GFKGKIYGYDINPESISKAVDL------------------GIIDEGTTSIAKVEDF 93 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHT--TCCSEEEEECSCHHHHHHHHHT------------------TSCSEEESCTTGGGGG
T ss_pred CEEEEEeeCHHHHHHHHHHHhC--CCCCEEEEEECCHHHHHHHHHC------------------CCcchhcCCHHHHhhc
Confidence 7999999999999999999999 88 999999999998877642 111 45677777 799
Q ss_pred CCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhccCCCceEEeeCC-
Q 017997 78 EADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNP- 156 (362)
Q Consensus 78 ~aDvVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~P- 156 (362)
+||+||+|||.. .+.++++++.+.++++++|++.+++.+...+.+.+.+.+. ++..+|
T Consensus 94 ~aDvVilavp~~---------------~~~~vl~~l~~~l~~~~iv~d~~Svk~~~~~~~~~~l~~~------~v~~hPm 152 (314)
T 3ggo_A 94 SPDFVMLSSPVR---------------TFREIAKKLSYILSEDATVTDQGSVKGKLVYDLENILGKR------FVGGHPI 152 (314)
T ss_dssp CCSEEEECSCGG---------------GHHHHHHHHHHHSCTTCEEEECCSCCTHHHHHHHHHHGGG------EECEEEC
T ss_pred cCCEEEEeCCHH---------------HHHHHHHHHhhccCCCcEEEECCCCcHHHHHHHHHhcCCC------EEecCcc
Confidence 999999999842 2467888999999999999988888766666666665432 233344
Q ss_pred ---cccccCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCcEEeCCh-hHHHHHHHHHhHHHHHHHHHHHH
Q 017997 157 ---EFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNL-WSAELSKLAANAFLAQRISSVNA 232 (362)
Q Consensus 157 ---e~~~~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~ae~~Kl~~N~~~~~~ia~~nE 232 (362)
+..++..+..+++....+++... ...+++..+.++++|+.++ ..+..++. ....+++++...-..+..++++.
T Consensus 153 ~G~e~sG~~~A~~~Lf~g~~~il~~~-~~~~~~~~~~v~~l~~~~G--~~v~~~~~~~hD~~~a~~s~lph~~a~~l~~~ 229 (314)
T 3ggo_A 153 AGTEKSGVEYSLDNLYEGKKVILTPT-KKTDKKRLKLVKRVWEDVG--GVVEYMSPELHDYVFGVVSHLPHAVAFALVDT 229 (314)
T ss_dssp CCCCCCSGGGCCTTTTTTCEEEECCC-TTSCHHHHHHHHHHHHHTT--CEEEECCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred cCCcccchhhhhhhhhcCCEEEEEeC-CCCCHHHHHHHHHHHHHcC--CEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44456566666666655555421 2225889999999999986 35555554 45567787777665555666655
Q ss_pred H
Q 017997 233 M 233 (362)
Q Consensus 233 ~ 233 (362)
+
T Consensus 230 ~ 230 (314)
T 3ggo_A 230 L 230 (314)
T ss_dssp H
T ss_pred H
Confidence 4
No 53
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=99.77 E-value=7.9e-18 Score=156.82 Aligned_cols=207 Identities=18% Similarity=0.179 Sum_probs=135.5
Q ss_pred CceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhh--------------hcCCCE
Q 017997 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQ--------------CRGKNL 66 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~--------------~~~~~l 66 (362)
|+||+|||+|.||.++|..|+++ ||+|++||+++++++.+++... ..++.++++ ....++
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~--G~~V~~~d~~~~~~~~~~~~i~----~~l~~~~~~g~~~~~~~~~~~~~~~~~~i 88 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAAT--GHTVVLVDQTEDILAKSKKGIE----ESLRKVAKKKFAENPKAGDEFVEKTLSTI 88 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHHH----HHHHHHHHTTSSSCHHHHHHHHHHHHHTE
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHH----HHHHHHHHcCCCCccccchhhHHHHHhce
Confidence 46899999999999999999999 9999999999998886532100 000000000 001258
Q ss_pred EEecCHHhhhcCCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEE-EeeCCccccHHHHHHHHHhcc
Q 017997 67 FFSTDVEKHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVV-EKSTVPVKTAEAIEKILTHNS 145 (362)
Q Consensus 67 ~~t~d~~~a~~~aDvVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv-~~STv~~gt~~~l~~~l~~~~ 145 (362)
++++|+++++++||+||+|||++. .....+++++.++++++++|+ ++|++++. .+.+.+....
T Consensus 89 ~~~~~~~~~~~~aD~Vi~avp~~~-------------~~~~~v~~~l~~~~~~~~iv~s~ts~i~~~---~l~~~~~~~~ 152 (302)
T 1f0y_A 89 ATSTDAASVVHSTDLVVEAIVENL-------------KVKNELFKRLDKFAAEHTIFASNTSSLQIT---SIANATTRQD 152 (302)
T ss_dssp EEESCHHHHTTSCSEEEECCCSCH-------------HHHHHHHHHHTTTSCTTCEEEECCSSSCHH---HHHTTSSCGG
T ss_pred EEecCHHHhhcCCCEEEEcCcCcH-------------HHHHHHHHHHHhhCCCCeEEEECCCCCCHH---HHHHhcCCcc
Confidence 889999878999999999998532 223567888988898888875 45566653 2322221110
Q ss_pred C--CCceEEeeCCcccccCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCcEEeCChhHHHHHHHHHhHHH
Q 017997 146 K--GIKFQILSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFL 223 (362)
Q Consensus 146 ~--g~~~~v~~~Pe~~~~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ae~~Kl~~N~~~ 223 (362)
. +.+| ++|.+..+ ...+ +++..+ +++..+.+.++|+.++. .++++.+.. + ++++|.
T Consensus 153 ~~~g~h~---~~P~~~~~---------~~~i-~~g~~~--~~e~~~~~~~l~~~~G~-~~v~~~~~~-g---~i~nr~-- 210 (302)
T 1f0y_A 153 RFAGLHF---FNPVPVMK---------LVEV-IKTPMT--SQKTFESLVDFSKALGK-HPVSCKDTP-G---FIVNRL-- 210 (302)
T ss_dssp GEEEEEE---CSSTTTCC---------EEEE-ECCTTC--CHHHHHHHHHHHHHTTC-EEEEECSCT-T---TTHHHH--
T ss_pred cEEEEec---CCCcccCc---------eEEE-eCCCCC--CHHHHHHHHHHHHHcCC-ceEEecCcc-c---ccHHHH--
Confidence 0 1111 23433211 1124 454432 48899999999999862 445554421 1 344433
Q ss_pred HHHHHHHHHHHHHHHHhCCCHHHHHHHhcC
Q 017997 224 AQRISSVNAMSALCEATGANVSQVAFAVGT 253 (362)
Q Consensus 224 ~~~ia~~nE~~~l~~~~g~d~~~v~~~~~~ 253 (362)
.++++||...++++.+++++++..++..
T Consensus 211 --l~~~~~Ea~~l~~~g~~~~~~id~~~~~ 238 (302)
T 1f0y_A 211 --LVPYLMEAIRLYERGDASKEDIDTAMKL 238 (302)
T ss_dssp --HHHHHHHHHHHHHTTSSCHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHcCCCCHHHHHHHHHh
Confidence 3578999999999999999999998864
No 54
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=99.77 E-value=5.7e-18 Score=158.42 Aligned_cols=267 Identities=15% Similarity=0.128 Sum_probs=161.3
Q ss_pred ceEEEEcCChhHHHHHHHHHHcC--C-C-CeEEEEeCCHHHHHHHHc-CCCCCCCCChHHHHhhhcCCCEEEecCHHhhh
Q 017997 2 VKICCIGAGYVGGPTMAVIALKC--P-S-IEVAVVDISVSRINAWNS-DQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHV 76 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~--~-G-~~V~~~d~~~~~~~~l~~-~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~ 76 (362)
|||+|||+|.||+++|..|++++ + | |+|++||+ +++++.+++ .+..+.++..... ..++.++++.+ .+
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r-~~~~~~l~~~~g~~~~~~~~~~~-----~~~~~~~~~~~-~~ 81 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR-GAHLEAIRAAGGLRVVTPSRDFL-----ARPTCVTDNPA-EV 81 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC-HHHHHHHHHHTSEEEECSSCEEE-----ECCSEEESCHH-HH
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc-HHHHHHHHhcCCeEEEeCCCCeE-----EecceEecCcc-cc
Confidence 79999999999999999999750 0 5 89999999 889999887 4433322111100 11245566665 47
Q ss_pred cCCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhccCCCceEEee-C
Q 017997 77 SEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILS-N 155 (362)
Q Consensus 77 ~~aDvVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~~~g~~~~v~~-~ 155 (362)
.++|+||+|||++. +.++++.+.+.++++++|+..++ .++..+.+.+.+.+.. .-..+.+ .
T Consensus 82 ~~~D~vil~vk~~~---------------~~~v~~~i~~~l~~~~~iv~~~n-G~~~~~~l~~~l~~~~--v~~g~~~~~ 143 (317)
T 2qyt_A 82 GTVDYILFCTKDYD---------------MERGVAEIRPMIGQNTKILPLLN-GADIAERMRTYLPDTV--VWKGCVYIS 143 (317)
T ss_dssp CCEEEEEECCSSSC---------------HHHHHHHHGGGEEEEEEEEECSC-SSSHHHHHTTTSCTTT--BCEEEEEEE
T ss_pred CCCCEEEEecCccc---------------HHHHHHHHHhhcCCCCEEEEccC-CCCcHHHHHHHCCCCc--EEEEEEEEE
Confidence 89999999998542 47788899988888887776433 3444455544443211 0011222 2
Q ss_pred CcccccCccccccCCCCeEEEecC-CCcchHHHHHHHHHHHhccCCCCcEEeCChhHHHHHHHHHhHHH-----------
Q 017997 156 PEFLAEGTAIQDLFNPDRVLIGGR-ETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFL----------- 223 (362)
Q Consensus 156 Pe~~~~g~a~~~~~~~~~viiG~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ae~~Kl~~N~~~----------- 223 (362)
..+..||...+. .....+++|.. +.. +++.. .+.++|+..+. ..++..|+..++|.|++.|...
T Consensus 144 a~~~~pg~~~~~-~~g~~~~ig~~~~~~-~~~~~-~~~~ll~~~g~-~~~~~~di~~~~~~Kl~~N~~~~~~~al~g~~~ 219 (317)
T 2qyt_A 144 ARKSAPGLITLE-ADRELFYFGSGLPEQ-TDDEV-RLAELLTAAGI-RAYNPTDIDWYIMKKFMMISVTATATAYFDKPI 219 (317)
T ss_dssp EEEEETTEEEEE-EEEEEEEEECCSSSC-CHHHH-HHHHHHHHTTC-CEECCSCHHHHHHHHHHHHHHHHHHHHHHTSCH
T ss_pred EEEcCCCEEEEc-CCCceEEEcCCCCCC-cCHHH-HHHHHHHHCCC-CCEEchHHHHHHHHHHHHHHhhHHHHHHHCCCH
Confidence 233445553221 11122336753 221 24556 88999998752 3345679999999999999853
Q ss_pred --------HHHHHHHHHHHHHHHHhCCCHH--HHHHHhcC----CCCCCC-CCccCCCCCcccChhHhHHHHHHHHHhCC
Q 017997 224 --------AQRISSVNAMSALCEATGANVS--QVAFAVGT----DSRIGP-KFLNASVGFGGSCFQKDILNLVYICECNG 288 (362)
Q Consensus 224 --------~~~ia~~nE~~~l~~~~g~d~~--~v~~~~~~----~~~i~~-~~~~~g~g~gg~cl~kD~~~l~~~a~~~g 288 (362)
.+..+.++|+..+++++|+++. .+.+.+.. .++..+ ...+...|.... +-....++.+.++++|
T Consensus 220 g~~~~~~~~~~~~~~~E~~~v~~a~G~~~~~~~~~~~~~~~~~~~~~~~~sm~~d~~~g~~~E-~~~~~g~~~~~a~~~g 298 (317)
T 2qyt_A 220 GSILTEHEPELLSLLEEVAELFRAKYGQVPDDVVQQLLDKQRKMPPESTSSMHSDFLQGGSTE-VETLTGYVVREAEALR 298 (317)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHHHHHTSCCCSSHHHHHHHHHHHC---------------------CTTTHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHhccCCCCCChHHHHHHcCCccC-HHHHhhHHHHHHHHcC
Confidence 4667999999999999999863 34443321 111111 111111222100 1123678999999999
Q ss_pred CchhHHHHHHHH
Q 017997 289 LPEVAEYWKQVI 300 (362)
Q Consensus 289 ~~~~~~~~~~~~ 300 (362)
++ .|+.+.+.
T Consensus 299 v~--~P~~~~~~ 308 (317)
T 2qyt_A 299 VD--LPMYKRMY 308 (317)
T ss_dssp CC--CHHHHHHH
T ss_pred CC--CCHHHHHH
Confidence 99 67666543
No 55
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=99.77 E-value=3.1e-18 Score=163.44 Aligned_cols=219 Identities=15% Similarity=0.147 Sum_probs=159.5
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCC--------eEEEEeCCHH-----HHHHHHcC-CCCCCCCChHHHHhhhcCCCEE
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSI--------EVAVVDISVS-----RINAWNSD-QLPIYEPGLDGVVKQCRGKNLF 67 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~--------~V~~~d~~~~-----~~~~l~~~-~~~~~e~~l~~~~~~~~~~~l~ 67 (362)
.||+|||+|.||+++|..|+++ || +|.+|.++++ ..+.+++. .++.|.|+.. +..+++
T Consensus 35 ~KI~ViGaGsWGTALA~~la~n--g~~~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~------Lp~~i~ 106 (391)
T 4fgw_A 35 FKVTVIGSGNWGTTIAKVVAEN--CKGYPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGIT------LPDNLV 106 (391)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH--HHHCTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCC------CCSSEE
T ss_pred CeEEEECcCHHHHHHHHHHHHc--CCCccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCc------CCCCcE
Confidence 4899999999999999999998 65 5999998865 36667764 4566666654 356899
Q ss_pred EecCHHhhhcCCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeC-CccccH--HHHHHHHHhc
Q 017997 68 FSTDVEKHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKST-VPVKTA--EAIEKILTHN 144 (362)
Q Consensus 68 ~t~d~~~a~~~aDvVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~ST-v~~gt~--~~l~~~l~~~ 144 (362)
+++|+.++++++|+||++||+. +++++++++.++++++.++|..++ +.+++. +.+.+.+.+.
T Consensus 107 ~t~dl~~al~~ad~ii~avPs~---------------~~r~~l~~l~~~~~~~~~iv~~~KGie~~~~~~~~~se~i~e~ 171 (391)
T 4fgw_A 107 ANPDLIDSVKDVDIIVFNIPHQ---------------FLPRICSQLKGHVDSHVRAISCLKGFEVGAKGVQLLSSYITEE 171 (391)
T ss_dssp EESCHHHHHTTCSEEEECSCGG---------------GHHHHHHHHTTTSCTTCEEEECCCSCEEETTEEECHHHHHHHH
T ss_pred EeCCHHHHHhcCCEEEEECChh---------------hhHHHHHHhccccCCCceeEEeccccccccccchhHHHHHHHH
Confidence 9999999999999999999863 478999999999999998887776 555442 3455555544
Q ss_pred cCCCceEEeeCCcccccCccccccCCCCeEEEecCCCcc-----hHHHHHHHHHHHhccCCCCcE-EeCChhHHHHHH--
Q 017997 145 SKGIKFQILSNPEFLAEGTAIQDLFNPDRVLIGGRETPE-----GQKAVKALKDVYAHWVPEDRI-LTTNLWSAELSK-- 216 (362)
Q Consensus 145 ~~g~~~~v~~~Pe~~~~g~a~~~~~~~~~viiG~~~~~~-----~~~~~~~~~~l~~~~~~~~~~-~~~~~~~ae~~K-- 216 (362)
. +..+.++++|.+..+-.. ..|..+++++.+... .+...+.++.+|.+-. .++ ...|+...|+..
T Consensus 172 ~-~~~~~vLsGPs~A~EVa~----~~pta~~iA~~~~~~~~~~~~~~~a~~~~~lf~~~~--frvy~s~DviGvElgGAl 244 (391)
T 4fgw_A 172 L-GIQCGALSGANIATEVAQ----EHWSETTVAYHIPKDFRGEGKDVDHKVLKALFHRPY--FHVSVIEDVAGISICGAL 244 (391)
T ss_dssp H-CCEEEEEECSCCHHHHHT----TCCEEEEEECCCCTTCCCSSSSCCHHHHHHHHCBTT--EEEEEESCHHHHHHHHHH
T ss_pred h-CccceeccCCchHHHhhc----CCCceEEEEecChhhhhhhhHHHHHHHHHHHhCCCC--EEEEEeCCccceehHHHH
Confidence 2 345778999998876443 466667787653210 1122466888887632 244 457988777654
Q ss_pred ---------------HHHhHHHHHHHHHHHHHHHHHHHh---CCCHHHHHHH
Q 017997 217 ---------------LAANAFLAQRISSVNAMSALCEAT---GANVSQVAFA 250 (362)
Q Consensus 217 ---------------l~~N~~~~~~ia~~nE~~~l~~~~---g~d~~~v~~~ 250 (362)
+-.|+..++....++||.+|+..+ |.+..++...
T Consensus 245 KNViAIAaGi~dGlg~G~NakAALitrGl~Em~rlg~al~~~g~~~tt~~gl 296 (391)
T 4fgw_A 245 KNVVALGCGFVEGLGWGNNASAAIQRVGLGEIIRFGQMFFPESREETYYQES 296 (391)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHST
T ss_pred HHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHhcccCCceeecCC
Confidence 447777888899999999999998 5554444433
No 56
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=99.77 E-value=1.4e-17 Score=157.36 Aligned_cols=265 Identities=19% Similarity=0.194 Sum_probs=167.8
Q ss_pred CceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCc
Q 017997 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (362)
+|||+|||+|.||+.+|..|+++ |++|++||++ ++++.+++.+..+..++... ..++.+++++++ +.++|
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~--g~~V~~~~r~-~~~~~~~~~g~~~~~~~~~~------~~~~~~~~~~~~-~~~~D 72 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALA--GEAINVLARG-ATLQALQTAGLRLTEDGATH------TLPVRATHDAAA-LGEQD 72 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHT--TCCEEEECCH-HHHHHHHHTCEEEEETTEEE------EECCEEESCHHH-HCCCS
T ss_pred CCEEEEECcCHHHHHHHHHHHHC--CCEEEEEECh-HHHHHHHHCCCEEecCCCeE------EEeeeEECCHHH-cCCCC
Confidence 38999999999999999999999 9999999996 67888876543332222110 113566788876 78999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeC-Cc-----------------cccHHHHHHHHH
Q 017997 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKST-VP-----------------VKTAEAIEKILT 142 (362)
Q Consensus 81 vVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~ST-v~-----------------~gt~~~l~~~l~ 142 (362)
+||+|||++ .+.++++++.+.++++++|+..++ ++ .+..+.+.+.+.
T Consensus 73 ~Vilavk~~---------------~~~~~~~~l~~~l~~~~~iv~~~nGi~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~ 137 (335)
T 3ghy_A 73 VVIVAVKAP---------------ALESVAAGIAPLIGPGTCVVVAMNGVPWWFFDRPGPLQGQRLQAVDPHGRIAQAIP 137 (335)
T ss_dssp EEEECCCHH---------------HHHHHHGGGSSSCCTTCEEEECCSSSCTTTTCSSSTTTTCCCTTTCTTSHHHHHSC
T ss_pred EEEEeCCch---------------hHHHHHHHHHhhCCCCCEEEEECCCCccccccccccccccccccCCcHHHHHHhcC
Confidence 999999852 467888889888988888875443 33 233345555443
Q ss_pred hccCCCceEEeeC-CcccccCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCcEEeCChhHHHHHHHHHhH
Q 017997 143 HNSKGIKFQILSN-PEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANA 221 (362)
Q Consensus 143 ~~~~g~~~~v~~~-Pe~~~~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ae~~Kl~~N~ 221 (362)
.... -..+.+. -.+..||...+. ...++.+|..+.. ..+..+.+.++|+..+- ......|+....|.|++.|+
T Consensus 138 ~~~v--~~gv~~~~a~~~~pg~v~~~--~~g~~~iG~~~~~-~~~~~~~l~~~l~~~g~-~~~~~~di~~~~w~Kl~~na 211 (335)
T 3ghy_A 138 TRHV--LGCVVHLTCATVSPGHIRHG--NGRRLILGEPAGG-ASPRLASIAALFGRAGL-QAECSEAIQRDIWFKLWGNM 211 (335)
T ss_dssp GGGE--EEEEECCCEEESSTTEEEEC--SCCEEEEECTTCS-CCHHHHHHHHHHHHTTC-EEEECSCHHHHHHHHHHTTT
T ss_pred cccE--EEEEEEEEEEEcCCcEEEEC--CCCeEEEecCCCC-cCHHHHHHHHHHHhCCC-CcEeCchHHHHHHHHHHHHh
Confidence 3210 0112222 234556665432 2246778865322 23567888899987642 23445799999999987554
Q ss_pred ---------------------HHHHHHHHHHHHHHHHHHhCCC----HHHHHHHhcCCCC-CCCCCccCCCCCcccChhH
Q 017997 222 ---------------------FLAQRISSVNAMSALCEATGAN----VSQVAFAVGTDSR-IGPKFLNASVGFGGSCFQK 275 (362)
Q Consensus 222 ---------------------~~~~~ia~~nE~~~l~~~~g~d----~~~v~~~~~~~~~-i~~~~~~~g~g~gg~cl~k 275 (362)
.+++..+.++|+..+++++|++ .+++++.+...+. ..+...+--.|-+-.=+-.
T Consensus 212 ~~N~l~al~~~~~g~~~~~~~~~~l~~~~~~E~~~va~a~G~~~~~~~~~~~~~~~~~~~~~sSM~qD~~~gr~~tEid~ 291 (335)
T 3ghy_A 212 TMNPVSVLTGATCDRILDDPLVSAFCLAVMAEAKAIGARIGCPIEQSGEARSAVTRQLGAFKTSMLQDAEAGRGPLEIDA 291 (335)
T ss_dssp THHHHHHHHCCCHHHHHHSHHHHHHHHHHHHHHHHHHHTTTCCCCSCHHHHHHHHHTTCSCCCTTTC-----CCCCCHHH
T ss_pred hhhHHHHHhCCChHHHhcChHHHHHHHHHHHHHHHHHHHcCCCCCccHHHHHHHHhccCCCCcHHHHHHHcCCCCchHHH
Confidence 4677889999999999999975 3445554433221 1112111111110011222
Q ss_pred hHHHHHHHHHhCCCchhHHHHHH
Q 017997 276 DILNLVYICECNGLPEVAEYWKQ 298 (362)
Q Consensus 276 D~~~l~~~a~~~g~~~~~~~~~~ 298 (362)
=..++++.|+++|++ .|..+.
T Consensus 292 i~G~vv~~a~~~gv~--~P~~~~ 312 (335)
T 3ghy_A 292 LVASVREIGLHVGVP--TPQIDT 312 (335)
T ss_dssp HTHHHHHHHHHHTCC--CHHHHH
T ss_pred HhhHHHHHHHHhCCC--CCHHHH
Confidence 245789999999999 665443
No 57
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=99.76 E-value=6.5e-18 Score=160.80 Aligned_cols=293 Identities=17% Similarity=0.187 Sum_probs=176.8
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcC-CCCCCCCChHHHHhhhcCCCE-EEecCHHhhhcCC
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSD-QLPIYEPGLDGVVKQCRGKNL-FFSTDVEKHVSEA 79 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~-~~~~~e~~l~~~~~~~~~~~l-~~t~d~~~a~~~a 79 (362)
|||+|||+|.||..+|..|+++ |++|++||+++++++.+++. ...+.+.+.+. ..++ .++++++++++++
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~ 76 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALK--GQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAG------TAHPDLLTSDIGLAVKDA 76 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHTSEEEESSSCCE------EECCSEEESCHHHHHTTC
T ss_pred CeEEEECCCHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHhcCCeEEecccccc------ccccceecCCHHHHHhcC
Confidence 6999999999999999999998 99999999999999988763 22221111110 0123 4677888878999
Q ss_pred cEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhccCCCce-E--EeeCC
Q 017997 80 DIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKF-Q--ILSNP 156 (362)
Q Consensus 80 DvVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~~~g~~~-~--v~~~P 156 (362)
|+||+|||++. ..++++++.+.++++++|+...++.+++. .+.+.+.+... ..+ + +..+|
T Consensus 77 D~vi~~v~~~~---------------~~~~~~~l~~~l~~~~~vv~~~~~~~~~~-~~~~~l~~~~~-~~v~~~~~~~~~ 139 (359)
T 1bg6_A 77 DVILIVVPAIH---------------HASIAANIASYISEGQLIILNPGATGGAL-EFRKILRENGA-PEVTIGETSSML 139 (359)
T ss_dssp SEEEECSCGGG---------------HHHHHHHHGGGCCTTCEEEESSCCSSHHH-HHHHHHHHTTC-CCCEEEEESSCS
T ss_pred CEEEEeCCchH---------------HHHHHHHHHHhCCCCCEEEEcCCCchHHH-HHHHHHHhcCC-CCeEEEEecCCc
Confidence 99999998532 36778899999999998876533333443 34455554321 111 1 12355
Q ss_pred cc---cccCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCcEEeCChhHHHHHHHH---------------
Q 017997 157 EF---LAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLA--------------- 218 (362)
Q Consensus 157 e~---~~~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ae~~Kl~--------------- 218 (362)
.. .+||... .+....++.+|......+++..+.++++|..+. ...|+ |.|++
T Consensus 140 ~~~~~~gpg~v~-~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~~-----~~~di----~~k~~~nvn~~~n~~~al~~ 209 (359)
T 1bg6_A 140 FTCRSERPGQVT-VNAIKGAMDFACLPAAKAGWALEQIGSVLPQYV-----AVENV----LHTSLTNVNAVMHPLPTLLN 209 (359)
T ss_dssp EEEECSSTTEEE-EEEECSCEEEEEESGGGHHHHHHHHTTTCTTEE-----ECSCH----HHHHHCCHHHHHTHHHHHTT
T ss_pred EEEEeCCCCEEE-EEEeecceEEEeccccccHHHHHHHHHHhhhcE-----EcCCh----HhhhccCCCccccHHHHHhh
Confidence 33 2355432 222223456665322123556677777665431 12333 22222
Q ss_pred -----------------HhHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhcCCCCC-----------CCCCcc-CCC-CC
Q 017997 219 -----------------ANAFLAQRISSVNAMSALCEATGANVSQVAFAVGTDSRI-----------GPKFLN-ASV-GF 268 (362)
Q Consensus 219 -----------------~N~~~~~~ia~~nE~~~l~~~~g~d~~~v~~~~~~~~~i-----------~~~~~~-~g~-g~ 268 (362)
.+..+.+..+.++|+..+++++|+++.++.+.+...... .+.+.+ .++ -+
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~va~a~G~~~~~~~~~~~~~~~~~~~~l~~~~~~~sm~~d~~~~~e~ 289 (359)
T 1bg6_A 210 AARCESGTPFQYYLEGITPSVGSLAEKVDAERIAIAKAFDLNVPSVCEWYKESYGQSPATIYEAVQGNPAYRGIAGPINL 289 (359)
T ss_dssp HHHHHTTCCCBHHHHHCCHHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHC-------CCSHHHHHHTCGGGTTCBCCSSS
T ss_pred hchhhcCCccchhhcCCCHHHHHHHHHHHHHHHHHHHHhCCCCCcHHHHHHHHhCCCcccHHHHHhcchhhcCCCCCCCC
Confidence 122356677889999999999999886666665431100 011100 011 12
Q ss_pred cccChhHhH----HHHHHHHHhCCCchhHHHHHHHHHHHHHhHHHHHHHHHHHhcCCC--CCCEEEEEeeecCCCCCCCC
Q 017997 269 GGSCFQKDI----LNLVYICECNGLPEVAEYWKQVIKINDYQKSRFVNRVVASMFNTV--SNKKIAVLGFAFKKDTGDTR 342 (362)
Q Consensus 269 gg~cl~kD~----~~l~~~a~~~g~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~--~~~~v~vlG~~~k~~~~d~r 342 (362)
-+.-+.||+ .++++.|+++|++ .|+.+.+.+.=. .+ ..+.+ .|+++..||++ +.+++|+|
T Consensus 290 ~~~~~~~D~~~~~g~~~~~a~~~gv~--~P~~~~l~~~~~--------~~---~~~~~~~~g~~~~~lgl~-~~~~~~~~ 355 (359)
T 1bg6_A 290 NTRYFFEDVSTGLVPLSELGRAVNVP--TPLIDAVLDLIS--------SL---IDTDFRKEGRTLEKLGLS-GLTAAGIR 355 (359)
T ss_dssp CCHHHHHHHHTTHHHHHHHHHHTTCC--CHHHHHHHHHHH--------HH---TTCCHHHHSCCTTTTTCT-TCCHHHHH
T ss_pred CccceecCcCccHHHHHHHHHHcCCC--chHHHHHHHHHH--------HH---HCCChhhcCCCHHhcCCC-CCCHHHHH
Confidence 333567887 6899999999999 776665543221 11 11111 37788889999 88887765
Q ss_pred C
Q 017997 343 E 343 (362)
Q Consensus 343 ~ 343 (362)
+
T Consensus 356 ~ 356 (359)
T 1bg6_A 356 S 356 (359)
T ss_dssp H
T ss_pred H
Confidence 3
No 58
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=99.76 E-value=6.3e-17 Score=149.35 Aligned_cols=205 Identities=14% Similarity=0.179 Sum_probs=139.4
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCC-----------CCCCCChHHHHhhhcCCCEEEec
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQL-----------PIYEPGLDGVVKQCRGKNLFFST 70 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~-----------~~~e~~l~~~~~~~~~~~l~~t~ 70 (362)
+||+|||+|.||.++|..|+++ |++|++||+++++++.+.+... .+.....+... .++++++
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~--G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~-----~~i~~~~ 77 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFH--GFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKAL-----GGIRYSD 77 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHH-----HHCEEES
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHH-----cCeEEeC
Confidence 5899999999999999999999 9999999999999887664200 01111111111 2467889
Q ss_pred CHHhhhcCCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEE-EeeCCccccHHHHHHHHHhccC--C
Q 017997 71 DVEKHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVV-EKSTVPVKTAEAIEKILTHNSK--G 147 (362)
Q Consensus 71 d~~~a~~~aDvVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv-~~STv~~gt~~~l~~~l~~~~~--g 147 (362)
++++++++||+||+|||.. ......+++++.+.++++++++ ++|++++ ..+.+.+..... |
T Consensus 78 ~~~~~~~~aDlVi~av~~~-------------~~~~~~v~~~l~~~~~~~~il~s~tS~~~~---~~la~~~~~~~~~ig 141 (283)
T 4e12_A 78 DLAQAVKDADLVIEAVPES-------------LDLKRDIYTKLGELAPAKTIFATNSSTLLP---SDLVGYTGRGDKFLA 141 (283)
T ss_dssp CHHHHTTTCSEEEECCCSC-------------HHHHHHHHHHHHHHSCTTCEEEECCSSSCH---HHHHHHHSCGGGEEE
T ss_pred CHHHHhccCCEEEEeccCc-------------HHHHHHHHHHHHhhCCCCcEEEECCCCCCH---HHHHhhcCCCcceEE
Confidence 9988899999999999853 2234677889999999999887 5666654 344444432211 2
Q ss_pred CceEEeeCCcccccCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCcEEe-CChhHHHHHHHHHhHHHHHH
Q 017997 148 IKFQILSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILT-TNLWSAELSKLAANAFLAQR 226 (362)
Q Consensus 148 ~~~~v~~~Pe~~~~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~ae~~Kl~~N~~~~~~ 226 (362)
.+| ++|.+..+ .. .++++..+ ++++.+.++++++.++. .++.+ .+.. .++.|.+ .
T Consensus 142 ~h~---~~p~~~~~---------lv-evv~~~~t--~~~~~~~~~~l~~~~g~-~~v~v~~~~~-----g~i~nr~---~ 197 (283)
T 4e12_A 142 LHF---ANHVWVNN---------TA-EVMGTTKT--DPEVYQQVVEFASAIGM-VPIELKKEKA-----GYVLNSL---L 197 (283)
T ss_dssp EEE---CSSTTTSC---------EE-EEEECTTS--CHHHHHHHHHHHHHTTC-EEEECSSCCT-----TTTHHHH---H
T ss_pred Ecc---CCCcccCc---------eE-EEEeCCCC--CHHHHHHHHHHHHHcCC-EEEEEecCCC-----CEEehHH---H
Confidence 221 24433221 11 23454433 58899999999999873 45555 2311 1244543 3
Q ss_pred HHHHHHHHHHHHHhCCCHHHHHHHhcC
Q 017997 227 ISSVNAMSALCEATGANVSQVAFAVGT 253 (362)
Q Consensus 227 ia~~nE~~~l~~~~g~d~~~v~~~~~~ 253 (362)
.++++|...++++.+++++++.+++..
T Consensus 198 ~~~~~ea~~l~~~g~~~~~~id~~~~~ 224 (283)
T 4e12_A 198 VPLLDAAAELLVDGIADPETIDKTWRI 224 (283)
T ss_dssp HHHHHHHHHHHHTTSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHh
Confidence 478999999999999999999999864
No 59
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=99.74 E-value=1.7e-17 Score=154.59 Aligned_cols=205 Identities=13% Similarity=0.112 Sum_probs=146.1
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHc------------CCCCCCCCChHHHHhhhcCCCEEEe
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNS------------DQLPIYEPGLDGVVKQCRGKNLFFS 69 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~------------~~~~~~e~~l~~~~~~~~~~~l~~t 69 (362)
.||+|||+|.||..+|..++.+ |++|++||++++.++...+ +... .....++.+ .+++.+
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~--G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~-~~~~~~~~l-----~~i~~~ 78 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASG--GFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLK-GSLSAEEQL-----SLISSC 78 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCC-SSSCHHHHH-----HTEEEE
T ss_pred CeEEEECCcHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCC-CccCHHHHH-----hhcccc
Confidence 4899999999999999999999 9999999999987654321 1111 011122222 468899
Q ss_pred cCHHhhhcCCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEE-EEeeCCccccHHHHHHHHHhccC--
Q 017997 70 TDVEKHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIV-VEKSTVPVKTAEAIEKILTHNSK-- 146 (362)
Q Consensus 70 ~d~~~a~~~aDvVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iV-v~~STv~~gt~~~l~~~l~~~~~-- 146 (362)
+|+++++++||+|+.|||.. .+++ ++++++|.+++++++|+ .++|++++... ...+....+
T Consensus 79 ~~l~~a~~~ad~ViEav~E~-----------l~iK--~~lf~~l~~~~~~~aIlaSNTSsl~is~i---a~~~~~p~r~i 142 (319)
T 3ado_A 79 TNLAEAVEGVVHIQECVPEN-----------LDLK--RKIFAQLDSIVDDRVVLSSSSSCLLPSKL---FTGLAHVKQCI 142 (319)
T ss_dssp CCHHHHTTTEEEEEECCCSC-----------HHHH--HHHHHHHHTTCCSSSEEEECCSSCCHHHH---HTTCTTGGGEE
T ss_pred cchHhHhccCcEEeeccccH-----------HHHH--HHHHHHHHHHhhhcceeehhhhhccchhh---hhhccCCCcEE
Confidence 99999999999999999852 3344 88999999999999988 66777776532 211111111
Q ss_pred CCceEEeeCCcccccCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCcEEe-CChhHHHHHHHHHhHHHHH
Q 017997 147 GIKFQILSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILT-TNLWSAELSKLAANAFLAQ 225 (362)
Q Consensus 147 g~~~~v~~~Pe~~~~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~ae~~Kl~~N~~~~~ 225 (362)
|.|| ++|.+..| ...|| .+..| ++++++++..+++.++ +.++.+ .|. ..++.|. +
T Consensus 143 g~Hf---fNP~~~m~---------LVEiv-~g~~T--s~~~~~~~~~~~~~~g-k~pv~v~kd~-----pGFi~NR---l 198 (319)
T 3ado_A 143 VAHP---VNPPYYIP---------LVELV-PHPET--SPATVDRTHALMRKIG-QSPVRVLKEI-----DGFVLNR---L 198 (319)
T ss_dssp EEEE---CSSTTTCC---------EEEEE-ECTTC--CHHHHHHHHHHHHHTT-CEEEECSSCC-----TTTTHHH---H
T ss_pred EecC---CCCccccc---------hHHhc-CCCCC--cHHHHHHHHHHHHHhC-CccCCcCCCC-----CCEeHHH---H
Confidence 2222 46655433 12355 44544 6899999999999987 356544 332 3467788 4
Q ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHhcCC
Q 017997 226 RISSVNAMSALCEATGANVSQVAFAVGTD 254 (362)
Q Consensus 226 ~ia~~nE~~~l~~~~g~d~~~v~~~~~~~ 254 (362)
..++++|...+.+...++++++..++...
T Consensus 199 ~~~~~~EA~~lv~eGvas~edID~~~~~g 227 (319)
T 3ado_A 199 QYAIISEAWRLVEEGIVSPSDLDLVMSDG 227 (319)
T ss_dssp HHHHHHHHHHHHHTTSSCHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHhC
Confidence 67999999999999999999999998754
No 60
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=99.74 E-value=2.2e-17 Score=170.37 Aligned_cols=207 Identities=17% Similarity=0.192 Sum_probs=138.9
Q ss_pred CceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCC----CCCCCC-hHHHHhhhcCCCEEEecCHHhh
Q 017997 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQL----PIYEPG-LDGVVKQCRGKNLFFSTDVEKH 75 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~----~~~e~~-l~~~~~~~~~~~l~~t~d~~~a 75 (362)
|+||+|||+|.||.++|.+|+++ ||+|++||+++++++..++... ...+.+ +...-......++++++|++ +
T Consensus 312 ~~kV~VIGaG~MG~~iA~~la~a--G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~~-~ 388 (725)
T 2wtb_A 312 IKKVAIIGGGLMGSGIATALILS--NYPVILKEVNEKFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGSLDYE-S 388 (725)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTT--TCCEEEECSSHHHHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEEESSSG-G
T ss_pred CcEEEEEcCCHhhHHHHHHHHhC--CCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEEeCCHH-H
Confidence 57899999999999999999999 9999999999998876532100 000000 00000001235688999984 6
Q ss_pred hcCCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEE-EEeeCCccccHHHHHHHHHhccC--CCceEE
Q 017997 76 VSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIV-VEKSTVPVKTAEAIEKILTHNSK--GIKFQI 152 (362)
Q Consensus 76 ~~~aDvVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iV-v~~STv~~gt~~~l~~~l~~~~~--g~~~~v 152 (362)
+++||+||+|||++. ...+.+++++.++++++++| .++||+++.. +...+..... |.+|
T Consensus 389 ~~~aDlVIeaVpe~~-------------~vk~~v~~~l~~~~~~~~IlasntStl~i~~---la~~~~~p~~~iG~hf-- 450 (725)
T 2wtb_A 389 FRDVDMVIEAVIENI-------------SLKQQIFADLEKYCPQHCILASNTSTIDLNK---IGERTKSQDRIVGAHF-- 450 (725)
T ss_dssp GTTCSEEEECCCSCH-------------HHHHHHHHHHHHHSCTTCEEEECCSSSCHHH---HTTTCSCTTTEEEEEE--
T ss_pred HCCCCEEEEcCcCCH-------------HHHHHHHHHHHhhCCCCcEEEeCCCCCCHHH---HHHHhcCCCCEEEecC--
Confidence 999999999998542 22366778899999999988 4577777643 2221211101 2222
Q ss_pred eeCCcccccCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCcEEeCChhHHHHHHHHHhHHHHHHHHHHHH
Q 017997 153 LSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRISSVNA 232 (362)
Q Consensus 153 ~~~Pe~~~~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ae~~Kl~~N~~~~~~ia~~nE 232 (362)
++|.+..+ ...|+ .+..+ ++++++.+.++++.++ +.++++.+. .+++.|.+. ++++||
T Consensus 451 -~~P~~~~~---------lvevv-~g~~t--~~e~~~~~~~l~~~lG-k~~v~v~d~-----~Gfi~Nril---~~~~~E 508 (725)
T 2wtb_A 451 -FSPAHIMP---------LLEIV-RTNHT--SAQVIVDLLDVGKKIK-KTPVVVGNC-----TGFAVNRMF---FPYTQA 508 (725)
T ss_dssp -CSSTTTCC---------EEEEE-ECSSC--CHHHHHHHHHHHHHTT-CEEEEEESS-----TTTTHHHHH---HHHHHH
T ss_pred -CCCcccCc---------eEEEE-ECCCC--CHHHHHHHHHHHHHhC-CEEEEECCC-----ccHHHHHHH---HHHHHH
Confidence 35654322 11344 44433 4899999999999987 356666653 345667643 478999
Q ss_pred HHHHHHHhCCCHHHHHHHh
Q 017997 233 MSALCEATGANVSQVAFAV 251 (362)
Q Consensus 233 ~~~l~~~~g~d~~~v~~~~ 251 (362)
...++++ |+|++++.+++
T Consensus 509 a~~l~~~-G~~~e~id~~~ 526 (725)
T 2wtb_A 509 AMFLVEC-GADPYLIDRAI 526 (725)
T ss_dssp HHHHHHT-TCCHHHHHHHH
T ss_pred HHHHHHC-CCCHHHHHHHH
Confidence 9999998 99999999998
No 61
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=99.73 E-value=2e-16 Score=146.35 Aligned_cols=175 Identities=16% Similarity=0.160 Sum_probs=123.0
Q ss_pred CceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCc
Q 017997 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (362)
||||+|||+|+||.++|..|+++++|++|++||+++++++.+.+... ....+++++++++++|
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~-----------------~~~~~~~~~~~~~~aD 68 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALERGI-----------------VDEATADFKVFAALAD 68 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTS-----------------CSEEESCTTTTGGGCS
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCC-----------------cccccCCHHHhhcCCC
Confidence 47999999999999999999987446899999999999988764210 0135567777789999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhh-cCCCCEEEEeeCCccccHHHHHHHHHhccCCCceEEeeCC---
Q 017997 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADV-SKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNP--- 156 (362)
Q Consensus 81 vVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~-l~~~~iVv~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~P--- 156 (362)
+||+|||.+ .+.++++++.+. ++++++|++.|++.++..+.+.+.+.+. +.. ++..+|
T Consensus 69 vVilavp~~---------------~~~~v~~~l~~~~l~~~~ivi~~~~~~~~~~~~l~~~l~~~--~~~-~v~~~P~~g 130 (290)
T 3b1f_A 69 VIILAVPIK---------------KTIDFIKILADLDLKEDVIITDAGSTKYEIVRAAEYYLKDK--PVQ-FVGSHPMAG 130 (290)
T ss_dssp EEEECSCHH---------------HHHHHHHHHHTSCCCTTCEEECCCSCHHHHHHHHHHHHTTS--SCE-EEEEEEC--
T ss_pred EEEEcCCHH---------------HHHHHHHHHHhcCCCCCCEEEECCCCchHHHHHHHHhcccc--CCE-EEEeCCcCC
Confidence 999999842 347788889888 8899999888888777667777666541 222 233344
Q ss_pred -cccccCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCcEEeCChhHHH
Q 017997 157 -EFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAE 213 (362)
Q Consensus 157 -e~~~~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ae 213 (362)
+...++.+..+++....+++... ...+++..+.++++|+.++ .+++..+....+
T Consensus 131 ~~~~g~~~a~~~l~~g~~~~~~~~-~~~~~~~~~~v~~l~~~~G--~~~~~~~~~~~d 185 (290)
T 3b1f_A 131 SHKSGAVAANVNLFENAYYIFSPS-CLTKPNTIPALQDLLSGLH--ARYVEIDAAEHD 185 (290)
T ss_dssp ---CCTTSCCTTTTTTSEEEEEEC-TTCCTTHHHHHHHHTGGGC--CEEEECCHHHHH
T ss_pred CCcchHHHhhHHHhCCCeEEEecC-CCCCHHHHHHHHHHHHHcC--CEEEEcCHHHHH
Confidence 33366666556666655544422 1113678899999999986 356556655433
No 62
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=99.73 E-value=2.8e-17 Score=169.45 Aligned_cols=203 Identities=18% Similarity=0.229 Sum_probs=137.1
Q ss_pred CceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhh---------hcCCCEEEecC
Q 017997 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQ---------CRGKNLFFSTD 71 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~---------~~~~~l~~t~d 71 (362)
+|||+|||+|.||.+||..|+++ ||+|++||+++++++...+.. +..++.++++ ...+++++++|
T Consensus 314 i~kV~VIGaG~MG~~iA~~la~a--G~~V~l~D~~~~~~~~~~~~i----~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d 387 (715)
T 1wdk_A 314 VKQAAVLGAGIMGGGIAYQSASK--GTPILMKDINEHGIEQGLAEA----AKLLVGRVDKGRMTPAKMAEVLNGIRPTLS 387 (715)
T ss_dssp CSSEEEECCHHHHHHHHHHHHHT--TCCEEEECSSHHHHHHHHHHH----HHHHHHHHTTTSSCHHHHHHHHHHEEEESS
T ss_pred CCEEEEECCChhhHHHHHHHHhC--CCEEEEEECCHHHHHHHHHHH----HHHHHHHHhcCCCCHHHHHHHhcCeEEECC
Confidence 47899999999999999999999 999999999999887632100 0001111100 00124788888
Q ss_pred HHhhhcCCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEE-EeeCCccccHHHHHHHHHhccC--CC
Q 017997 72 VEKHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVV-EKSTVPVKTAEAIEKILTHNSK--GI 148 (362)
Q Consensus 72 ~~~a~~~aDvVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv-~~STv~~gt~~~l~~~l~~~~~--g~ 148 (362)
+ +++++||+||+|||++. .....+++++.++++++++|+ ++||+++.. +.+.+..... |.
T Consensus 388 ~-~~~~~aDlVIeaV~e~~-------------~vk~~v~~~l~~~~~~~~IlasntStl~i~~---la~~~~~~~~~ig~ 450 (715)
T 1wdk_A 388 Y-GDFGNVDLVVEAVVENP-------------KVKQAVLAEVENHVREDAILASNTSTISISL---LAKALKRPENFVGM 450 (715)
T ss_dssp S-TTGGGCSEEEECCCSCH-------------HHHHHHHHHHHTTSCTTCEEEECCSSSCHHH---HGGGCSCGGGEEEE
T ss_pred H-HHHCCCCEEEEcCCCCH-------------HHHHHHHHHHHhhCCCCeEEEeCCCCCCHHH---HHHHhcCccceEEE
Confidence 8 56999999999998532 223667888999999999885 577777642 2222211100 22
Q ss_pred ceEEeeCCcccccCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCcEEeCChhHHHHHHHHHhHHHHHHHH
Q 017997 149 KFQILSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRIS 228 (362)
Q Consensus 149 ~~~v~~~Pe~~~~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ae~~Kl~~N~~~~~~ia 228 (362)
+| ++|.+..+ ...++.| ..+ ++++++.+.++++.++ +.++++.+. .+++.|.+. ++
T Consensus 451 hf---~~P~~~~~---------lvevv~g-~~t--~~e~~~~~~~l~~~lG-k~~v~v~d~-----~Gfi~Nril---~~ 506 (715)
T 1wdk_A 451 HF---FNPVHMMP---------LVEVIRG-EKS--SDLAVATTVAYAKKMG-KNPIVVNDC-----PGFLVNRVL---FP 506 (715)
T ss_dssp EC---CSSTTTCC---------EEEEEEC-SSC--CHHHHHHHHHHHHHTT-CEEEEEESC-----TTTTHHHHH---HH
T ss_pred Ec---cCCcccCc---------eEEEEEC-CCC--CHHHHHHHHHHHHHhC-CEeEEEcCC-----CChhhhHHH---HH
Confidence 22 34543322 1134444 433 4899999999999987 356666653 344666643 47
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHh
Q 017997 229 SVNAMSALCEATGANVSQVAFAV 251 (362)
Q Consensus 229 ~~nE~~~l~~~~g~d~~~v~~~~ 251 (362)
++||...++++ |+|++++.+++
T Consensus 507 ~~~Ea~~l~~~-G~~~~~id~~~ 528 (715)
T 1wdk_A 507 YFGGFAKLVSA-GVDFVRIDKVM 528 (715)
T ss_dssp HHHHHHHHHHT-TCCHHHHHHHH
T ss_pred HHHHHHHHHHC-CCCHHHHHHHH
Confidence 89999999997 99999999998
No 63
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=99.73 E-value=3.9e-16 Score=143.53 Aligned_cols=190 Identities=14% Similarity=0.081 Sum_probs=132.0
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcE
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (362)
|||+|||+|.||..+|..|++. |++|++||+++++++.+++.... ...+++++++ +++|+
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~~~~~~~~~~~~~g~~-----------------~~~~~~~~~~-~~~D~ 60 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRR--GHYLIGVSRQQSTCEKAVERQLV-----------------DEAGQDLSLL-QTAKI 60 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHTTSC-----------------SEEESCGGGG-TTCSE
T ss_pred CEEEEEcCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHhCCCC-----------------ccccCCHHHh-CCCCE
Confidence 7999999999999999999998 89999999999999887652110 1346677776 89999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhccCCCceEEeeCCccccc
Q 017997 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEFLAE 161 (362)
Q Consensus 82 Vii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~~~~ 161 (362)
||+|||.+ .+.++++++.+.++++++|++.+++.+...+.+.+.+... ...+-..+++..+|
T Consensus 61 vi~av~~~---------------~~~~~~~~l~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~---~~~~p~~g~~~~gp 122 (279)
T 2f1k_A 61 IFLCTPIQ---------------LILPTLEKLIPHLSPTAIVTDVASVKTAIAEPASQLWSGF---IGGHPMAGTAAQGI 122 (279)
T ss_dssp EEECSCHH---------------HHHHHHHHHGGGSCTTCEEEECCSCCHHHHHHHHHHSTTC---EEEEECCCCSCSSG
T ss_pred EEEECCHH---------------HHHHHHHHHHhhCCCCCEEEECCCCcHHHHHHHHHHhCCE---eecCcccCCccCCH
Confidence 99999842 4577888999999999999887777665555554433210 01111233344556
Q ss_pred CccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCcEEeCChhHHHHHHHHHhHHHHHHHHHHH
Q 017997 162 GTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRISSVN 231 (362)
Q Consensus 162 g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ae~~Kl~~N~~~~~~ia~~n 231 (362)
+.+..+++....+++... ...+++..+.++++|+.++. .++...+....+++|++.|.-..+..++++
T Consensus 123 ~~a~~~~~~g~~~~~~~~-~~~~~~~~~~v~~l~~~~g~-~~~~~~~~~~~~~~~~~~~~p~~i~~al~~ 190 (279)
T 2f1k_A 123 DGAEENLFVNAPYVLTPT-EYTDPEQLACLRSVLEPLGV-KIYLCTPADHDQAVAWISHLPVMVSAALIQ 190 (279)
T ss_dssp GGCCTTTTTTCEEEEEEC-TTCCHHHHHHHHHHHGGGTC-EEEECCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred HHHhHHHhCCCcEEEecC-CCCCHHHHHHHHHHHHHcCC-EEEEcCHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 666555555433333321 11147889999999999862 344556778999999999975444444444
No 64
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=99.71 E-value=4.9e-16 Score=141.87 Aligned_cols=197 Identities=12% Similarity=0.063 Sum_probs=134.7
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCe-EEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCc
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIE-VAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~-V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (362)
|||+|||+|.||..+|..|++. |++ |.+||+++++++.+.+. -++..+++++++++++|
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~--g~~~v~~~~~~~~~~~~~~~~------------------~g~~~~~~~~~~~~~~D 70 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRK--GFRIVQVYSRTEESARELAQK------------------VEAEYTTDLAEVNPYAK 70 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH--TCCEEEEECSSHHHHHHHHHH------------------TTCEEESCGGGSCSCCS
T ss_pred CeEEEEcCCHHHHHHHHHHHHC--CCeEEEEEeCCHHHHHHHHHH------------------cCCceeCCHHHHhcCCC
Confidence 7999999999999999999998 898 99999999999887652 12456778888788999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhccCCCceEEeeCCcccc
Q 017997 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEFLA 160 (362)
Q Consensus 81 vVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~~~ 160 (362)
+||+|+|.+ .+.++++++.+.++++++|+..|+..+.+. +.+.+... ......+|-...
T Consensus 71 vvi~av~~~---------------~~~~v~~~l~~~~~~~~ivv~~s~~~~~~~--l~~~~~~~----~~~~~~~~~~g~ 129 (266)
T 3d1l_A 71 LYIVSLKDS---------------AFAELLQGIVEGKREEALMVHTAGSIPMNV--WEGHVPHY----GVFYPMQTFSKQ 129 (266)
T ss_dssp EEEECCCHH---------------HHHHHHHHHHTTCCTTCEEEECCTTSCGGG--STTTCSSE----EEEEECCCC---
T ss_pred EEEEecCHH---------------HHHHHHHHHHhhcCCCcEEEECCCCCchHH--HHHHHHhc----cCcCCceecCCC
Confidence 999998742 347788888888889999988887544322 22222211 112233441111
Q ss_pred cCccccccCCCCeEEE-ecCCCcchHHHHHHHHHHHhccCCCCcEEeCChh---HHHHHHHHHhHHHHHHHHHHHHHHHH
Q 017997 161 EGTAIQDLFNPDRVLI-GGRETPEGQKAVKALKDVYAHWVPEDRILTTNLW---SAELSKLAANAFLAQRISSVNAMSAL 236 (362)
Q Consensus 161 ~g~a~~~~~~~~~vii-G~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~---~ae~~Kl~~N~~~~~~ia~~nE~~~l 236 (362)
+. ..+.+.+ +++ |++ ++..+.++++|+.++. .++...+.. ...+.|++.|.. ..+..+.|. +
T Consensus 130 ~~---~~~~~~~-~~v~~~~-----~~~~~~~~~l~~~~g~-~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~ea--l 195 (266)
T 3d1l_A 130 RE---VDFKEIP-FFIEASS-----TEDAAFLKAIASTLSN-RVYDADSEQRKSLHLAAVFTCNFT--NHMYALAAE--L 195 (266)
T ss_dssp CC---CCCTTCC-EEEEESS-----HHHHHHHHHHHHTTCS-CEEECCHHHHHHHHHHHHHHHHHH--HHHHHHHHH--H
T ss_pred ch---hhcCCCe-EEEecCC-----HHHHHHHHHHHHhcCC-cEEEeCHHHHHHHHHHHHHHHHHH--HHHHHHHHH--H
Confidence 11 1233333 445 433 7889999999999862 344444332 568899998873 234444453 7
Q ss_pred HHHhCCCHHHHHHHhcC
Q 017997 237 CEATGANVSQVAFAVGT 253 (362)
Q Consensus 237 ~~~~g~d~~~v~~~~~~ 253 (362)
+++.|+|.+++.+++..
T Consensus 196 ~~~~Gl~~~~~~~l~~~ 212 (266)
T 3d1l_A 196 LKKYNLPFDVMLPLIDE 212 (266)
T ss_dssp HHHTTCCGGGGHHHHHH
T ss_pred HHHcCCCHHHHHHHHHH
Confidence 78999999888777653
No 65
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=99.70 E-value=1.1e-15 Score=138.19 Aligned_cols=196 Identities=18% Similarity=0.265 Sum_probs=127.3
Q ss_pred CceEEEEcCChhHHHHHHHHHHcCCCC----eEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhh
Q 017997 1 MVKICCIGAGYVGGPTMAVIALKCPSI----EVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHV 76 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~la~~~~G~----~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~ 76 (362)
+|||+|||+|.||.++|..|+++ |+ +|++||+++++++.+.+. .++..+++..+++
T Consensus 2 ~~~i~iIG~G~mG~~~a~~l~~~--g~~~~~~V~~~~r~~~~~~~~~~~------------------~g~~~~~~~~e~~ 61 (247)
T 3gt0_A 2 DKQIGFIGCGNMGMAMIGGMINK--NIVSSNQIICSDLNTANLKNASEK------------------YGLTTTTDNNEVA 61 (247)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT--TSSCGGGEEEECSCHHHHHHHHHH------------------HCCEECSCHHHHH
T ss_pred CCeEEEECccHHHHHHHHHHHhC--CCCCCCeEEEEeCCHHHHHHHHHH------------------hCCEEeCChHHHH
Confidence 37999999999999999999999 88 999999999999888641 0256678888888
Q ss_pred cCCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEE-EeeCCccccHHHHHHHHHhccCCCceEEee-
Q 017997 77 SEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVV-EKSTVPVKTAEAIEKILTHNSKGIKFQILS- 154 (362)
Q Consensus 77 ~~aDvVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv-~~STv~~gt~~~l~~~l~~~~~g~~~~v~~- 154 (362)
+++|+||+||| |. .+.++++++.++++++++|+ +.++++ .+.+.+.+... .. .+..
T Consensus 62 ~~aDvVilav~-~~--------------~~~~v~~~l~~~l~~~~~vvs~~~gi~---~~~l~~~~~~~---~~-~v~~~ 119 (247)
T 3gt0_A 62 KNADILILSIK-PD--------------LYASIINEIKEIIKNDAIIVTIAAGKS---IESTENAFNKK---VK-VVRVM 119 (247)
T ss_dssp HHCSEEEECSC-TT--------------THHHHC---CCSSCTTCEEEECSCCSC---HHHHHHHHCSC---CE-EEEEE
T ss_pred HhCCEEEEEeC-HH--------------HHHHHHHHHHhhcCCCCEEEEecCCCC---HHHHHHHhCCC---Cc-EEEEe
Confidence 99999999996 32 25778888988888888876 233343 34455545331 11 2223
Q ss_pred --CCcccccCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCcEEeCChhHHH-HHHHHHhHHHHHHHHHHH
Q 017997 155 --NPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAE-LSKLAANAFLAQRISSVN 231 (362)
Q Consensus 155 --~Pe~~~~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ae-~~Kl~~N~~~~~~ia~~n 231 (362)
.|....+|. .++..+.. .+++..+.++++|+.++ ..+.+ +..... ++.+.... -+....++.
T Consensus 120 p~~p~~~~~g~---------~~~~~~~~--~~~~~~~~~~~l~~~~G--~~~~~-~e~~~d~~~a~~g~g-pa~~~~~~e 184 (247)
T 3gt0_A 120 PNTPALVGEGM---------SALCPNEM--VTEKDLEDVLNIFNSFG--QTEIV-SEKLMDVVTSVSGSS-PAYVYMIIE 184 (247)
T ss_dssp CCGGGGGTCEE---------EEEEECTT--CCHHHHHHHHHHHGGGE--EEEEC-CGGGHHHHHHHHHHH-HHHHHHHHH
T ss_pred CChHHHHcCce---------EEEEeCCC--CCHHHHHHHHHHHHhCC--CEEEe-CHHHccHHHHHhccH-HHHHHHHHH
Confidence 343333322 23333221 24788999999999986 34444 333222 23332221 223334455
Q ss_pred HHHHHHHHhCCCHHHHHHHhcC
Q 017997 232 AMSALCEATGANVSQVAFAVGT 253 (362)
Q Consensus 232 E~~~l~~~~g~d~~~v~~~~~~ 253 (362)
.+...+.+.|+|.++..+++..
T Consensus 185 al~~a~~~~Gl~~~~a~~~~~~ 206 (247)
T 3gt0_A 185 AMADAAVLDGMPRNQAYKFAAQ 206 (247)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHH
Confidence 5555588999999999988764
No 66
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=99.70 E-value=4.8e-16 Score=152.97 Aligned_cols=205 Identities=16% Similarity=0.166 Sum_probs=136.0
Q ss_pred CceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhh--h-----cCCCEEEecCHH
Q 017997 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQ--C-----RGKNLFFSTDVE 73 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~--~-----~~~~l~~t~d~~ 73 (362)
||||+|||+|.||.++|..|+++ |++|++||+++++++...+.. +..++.++.+ . .....+.+++++
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~--G~~V~l~D~~~~~~~~~~~~i----~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~ 110 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARV--GISVVAVESDPKQLDAAKKII----TFTLEKEASRAHQNGQASAKPKLRFSSSTK 110 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT--TCEEEEECSSHHHHHHHHHHH----HHHHHHHHHHHHHTTCCCCCCCEEEESCGG
T ss_pred CCEEEEECcCHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHHHH----HHHHHHHHHcCCCCHHHHHHHHhhhcCCHH
Confidence 47899999999999999999999 999999999999888765411 0011111111 0 012245678884
Q ss_pred hhhcCCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhccC--CCceE
Q 017997 74 KHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSK--GIKFQ 151 (362)
Q Consensus 74 ~a~~~aDvVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~~~--g~~~~ 151 (362)
++++||+||+|||.. +....++++++.++++++++|+. ||..+..+ .+.+.+..... |.+|
T Consensus 111 -~~~~aDlVIeaVpe~-------------~~~k~~v~~~l~~~~~~~~ii~s-nTs~~~~~-~la~~~~~~~~~ig~hf- 173 (463)
T 1zcj_A 111 -ELSTVDLVVEAVFED-------------MNLKKKVFAELSALCKPGAFLCT-NTSALNVD-DIASSTDRPQLVIGTHF- 173 (463)
T ss_dssp -GGTTCSEEEECCCSC-------------HHHHHHHHHHHHHHSCTTCEEEE-CCSSSCHH-HHHTTSSCGGGEEEEEE-
T ss_pred -HHCCCCEEEEcCCCC-------------HHHHHHHHHHHHhhCCCCeEEEe-CCCCcCHH-HHHHHhcCCcceEEeec-
Confidence 589999999999842 23346788889999999988764 66655554 44433321111 3333
Q ss_pred EeeCCcccccCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCcEEeCChhHHHHHHHHHhHHHHHHHHHHH
Q 017997 152 ILSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRISSVN 231 (362)
Q Consensus 152 v~~~Pe~~~~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ae~~Kl~~N~~~~~~ia~~n 231 (362)
++|....+ ...++ .+..+ ++++++.+.++++.++. .++++.+. .+++.|.+. ..+++
T Consensus 174 --~~P~~~~~---------lvevv-~g~~t--~~e~~~~~~~l~~~lGk-~~v~v~~~-----~gfi~Nrll---~~~~~ 230 (463)
T 1zcj_A 174 --FSPAHVMR---------LLEVI-PSRYS--SPTTIATVMSLSKKIGK-IGVVVGNC-----YGFVGNRML---APYYN 230 (463)
T ss_dssp --CSSTTTCC---------EEEEE-ECSSC--CHHHHHHHHHHHHHTTC-EEEEBCCS-----TTTTHHHHH---HHHHH
T ss_pred --CCCcccce---------eEEEe-CCCCC--CHHHHHHHHHHHHHhCC-EEEEECCC-----ccHHHHHHH---HHHHH
Confidence 25654321 11344 44333 58999999999999873 45666542 223555543 35679
Q ss_pred HHHHHHHHhCCCHHHHHHHhc
Q 017997 232 AMSALCEATGANVSQVAFAVG 252 (362)
Q Consensus 232 E~~~l~~~~g~d~~~v~~~~~ 252 (362)
|...++++ |++++++.+++.
T Consensus 231 ea~~l~~~-G~~~~~id~~~~ 250 (463)
T 1zcj_A 231 QGFFLLEE-GSKPEDVDGVLE 250 (463)
T ss_dssp HHHHHHHT-TCCHHHHHHHHH
T ss_pred HHHHHHHc-CCCHHHHHHHHH
Confidence 99999887 899999998875
No 67
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=99.69 E-value=5e-16 Score=143.47 Aligned_cols=203 Identities=14% Similarity=0.088 Sum_probs=135.0
Q ss_pred CceEEEEcC-ChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCC
Q 017997 1 MVKICCIGA-GYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEA 79 (362)
Q Consensus 1 ~mkI~VIGl-G~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~a 79 (362)
||||+|||+ |.||.++|..|++. |++|++||+++++++.+.+.. +..+ +..++++++
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~--g~~V~~~~r~~~~~~~~~~~g-------------------~~~~-~~~~~~~~a 68 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDS--AHHLAAIEIAPEGRDRLQGMG-------------------IPLT-DGDGWIDEA 68 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHS--SSEEEEECCSHHHHHHHHHTT-------------------CCCC-CSSGGGGTC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHhcC-------------------CCcC-CHHHHhcCC
Confidence 479999999 99999999999998 999999999999998876521 1122 445668899
Q ss_pred cEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhccCCCceEEeeCCccc
Q 017997 80 DIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEFL 159 (362)
Q Consensus 80 DvVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~~ 159 (362)
|+||+|||.+ .+.++++++.+.++++++|+..|+..+ .+.+. +...+.. ++..+|.+.
T Consensus 69 DvVi~av~~~---------------~~~~v~~~l~~~l~~~~ivv~~s~~~~--~~~l~----~~~~~~~-~v~~~P~~~ 126 (286)
T 3c24_A 69 DVVVLALPDN---------------IIEKVAEDIVPRVRPGTIVLILDAAAP--YAGVM----PERADIT-YFIGHPCHP 126 (286)
T ss_dssp SEEEECSCHH---------------HHHHHHHHHGGGSCTTCEEEESCSHHH--HHTCS----CCCTTSE-EEEEEECCS
T ss_pred CEEEEcCCch---------------HHHHHHHHHHHhCCCCCEEEECCCCch--hHHHH----hhhCCCe-EEecCCCCc
Confidence 9999999842 367888899998999999988666432 12221 1111222 343666543
Q ss_pred cc---Cc---cccccCC----CCeEEEecCCCcchHHHHHHHHHHHhccCCCC---cEEeCChhHHHHH-HHHHhHHHHH
Q 017997 160 AE---GT---AIQDLFN----PDRVLIGGRETPEGQKAVKALKDVYAHWVPED---RILTTNLWSAELS-KLAANAFLAQ 225 (362)
Q Consensus 160 ~~---g~---a~~~~~~----~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~ae~~-Kl~~N~~~~~ 225 (362)
.+ +. ...+... ...++++... +++..+.++++|+.++ . .++..+....... |.+.|.....
T Consensus 127 ~~~~~~~~~~~~~g~l~~~~~~~~i~~~~~~---~~~~~~~v~~l~~~~G--~~~~~~~~v~~~~~~~~~~a~~n~~~~~ 201 (286)
T 3c24_A 127 PLFNDETDPAARTDYHGGIAKQAIVCALMQG---PEEHYAIGADICETMW--SPVTRTHRVTTEQLAILEPGLSEMVAMP 201 (286)
T ss_dssp CSSCCCCSHHHHTCSSSSSSCEEEEEEEEES---CTHHHHHHHHHHHHHT--CSEEEEEECCHHHHHHHTTHHHHTTHHH
T ss_pred cccccccchhhccCcccccccceeeeeccCC---CHHHHHHHHHHHHHhc--CCcceEEEeChhHhHHHHHHHHHHHHHH
Confidence 22 11 1111100 0112222111 2678999999999986 3 3444455445555 9999866555
Q ss_pred H-HHHHHHHHHHHHHhCCCHHHHHHHhc
Q 017997 226 R-ISSVNAMSALCEATGANVSQVAFAVG 252 (362)
Q Consensus 226 ~-ia~~nE~~~l~~~~g~d~~~v~~~~~ 252 (362)
. +++++++...+.+.|+|.+++.+++.
T Consensus 202 ~~~~~~eal~~~~~~~Gl~~~~~~~~~~ 229 (286)
T 3c24_A 202 FVETMVHAVDECADRYGIDRQAALDFMI 229 (286)
T ss_dssp HHHHHHHHHHHHHHHHCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 4 45555577788888999999888775
No 68
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=99.69 E-value=4.4e-16 Score=146.05 Aligned_cols=253 Identities=18% Similarity=0.146 Sum_probs=159.0
Q ss_pred CceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCc
Q 017997 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (362)
+|||+|||+|.||+.+|..|+++ |++|++| +++++++.+++.+..+..++... ..++.+++++++ +.++|
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~--G~~V~l~-~~~~~~~~i~~~g~~~~~~~~~~------~~~~~~~~~~~~-~~~~D 88 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARA--GHEVILI-ARPQHVQAIEATGLRLETQSFDE------QVKVSASSDPSA-VQGAD 88 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHT--TCEEEEE-CCHHHHHHHHHHCEEEECSSCEE------EECCEEESCGGG-GTTCS
T ss_pred CCcEEEECcCHHHHHHHHHHHHC--CCeEEEE-EcHhHHHHHHhCCeEEEcCCCcE------EEeeeeeCCHHH-cCCCC
Confidence 48999999999999999999999 9999999 99999999986443333332210 123567788765 78999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHH-hccCCC--ceEEeeCCc
Q 017997 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILT-HNSKGI--KFQILSNPE 157 (362)
Q Consensus 81 vVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~-~~~~g~--~~~v~~~Pe 157 (362)
+||+|||+. .+.++++++.++++++++|+..+ ...+..+.+.+.+. +...+. ...+..+|.
T Consensus 89 ~vilavk~~---------------~~~~~l~~l~~~l~~~~~iv~~~-nGi~~~~~l~~~~~~~vl~g~~~~~a~~~gP~ 152 (318)
T 3hwr_A 89 LVLFCVKST---------------DTQSAALAMKPALAKSALVLSLQ-NGVENADTLRSLLEQEVAAAVVYVATEMAGPG 152 (318)
T ss_dssp EEEECCCGG---------------GHHHHHHHHTTTSCTTCEEEEEC-SSSSHHHHHHHHCCSEEEEEEEEEEEEEEETT
T ss_pred EEEEEcccc---------------cHHHHHHHHHHhcCCCCEEEEeC-CCCCcHHHHHHHcCCcEEEEEEEEeEEEcCCe
Confidence 999999853 25788999999999988876533 33333355655553 111111 011223444
Q ss_pred ccccCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCcEEeCChhHHHHHHHHHhHH---------------
Q 017997 158 FLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAF--------------- 222 (362)
Q Consensus 158 ~~~~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ae~~Kl~~N~~--------------- 222 (362)
++.... . .++.+|.. +..+.+.++|+..+- ..+...|+...+|.|++-|+.
T Consensus 153 ~~~~~~-----~--g~~~ig~~------~~~~~l~~~l~~~~~-~~~~~~Di~~~~w~Kl~~N~~~n~l~al~~~~~g~l 218 (318)
T 3hwr_A 153 HVRHHG-----R--GELVIEPT------SHGANLAAIFAAAGV-PVETSDNVRGALWAKLILNCAYNALSAITQLPYGRL 218 (318)
T ss_dssp EEEEEE-----E--EEEEECCC------TTTHHHHHHHHHTTC-CEEECSCHHHHHHHHHHHHHHHHHHHHHHTCCHHHH
T ss_pred EEEEcC-----C--ceEEEcCC------HHHHHHHHHHHhCCC-CcEechHHHHHHHHHHHHHhhhhHHHHHHCCCHHHH
Confidence 333211 1 13556752 234678888887542 244567999999999998872
Q ss_pred ------HHHHHHHHHHHHHHHHHhCCCH-----HHHHHHhcCCCCC-CCCC--ccCCCCCcccChhHhHHHHHHHHHhCC
Q 017997 223 ------LAQRISSVNAMSALCEATGANV-----SQVAFAVGTDSRI-GPKF--LNASVGFGGSCFQKDILNLVYICECNG 288 (362)
Q Consensus 223 ------~~~~ia~~nE~~~l~~~~g~d~-----~~v~~~~~~~~~i-~~~~--~~~g~g~gg~cl~kD~~~l~~~a~~~g 288 (362)
+.+....+.|+..++++.|+++ +.+++.+...+.. .++. +..|-.. =+--=..++++.++++|
T Consensus 219 ~~~~~~~~l~~~~~~E~~~va~a~G~~l~~~~~~~~~~~~~~~~~~~sSM~qD~~~gr~t---Eid~i~G~vv~~a~~~g 295 (318)
T 3hwr_A 219 VRGEGVEAVMRDVMEECFAVARAEGVKLPDDVALAIRRIAETMPRQSSSTAQDLARGKRS---EIDHLNGLIVRRGDALG 295 (318)
T ss_dssp TTSTTHHHHHHHHHHHHHHHHHHTTCCCCTTHHHHHHHHHHHSTTCCCHHHHHHHTTCCC---SGGGTHHHHHHHHHHTT
T ss_pred hcChhHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHhcCCCCcHHHHHHHcCChh---HHHHHHHHHHHHHHHhC
Confidence 3566789999999999999762 3343433211111 1110 0111000 00111347899999999
Q ss_pred CchhHHHHHH
Q 017997 289 LPEVAEYWKQ 298 (362)
Q Consensus 289 ~~~~~~~~~~ 298 (362)
++ .|..+.
T Consensus 296 v~--tP~~~~ 303 (318)
T 3hwr_A 296 IP--VPANRV 303 (318)
T ss_dssp CC--CHHHHH
T ss_pred CC--CcHHHH
Confidence 98 565443
No 69
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=99.68 E-value=3.1e-15 Score=139.89 Aligned_cols=258 Identities=14% Similarity=0.061 Sum_probs=158.7
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcE
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (362)
|||+|||+|.||+.+|..|+++ |++|++|++++ .+.+++.+..+..+.-. . ....+.+++++++ +..+|+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~--g~~V~~~~r~~--~~~i~~~g~~~~~~~g~--~---~~~~~~~~~~~~~-~~~~D~ 72 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRS--GEDVHFLLRRD--YEAIAGNGLKVFSINGD--F---TLPHVKGYRAPEE-IGPMDL 72 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHT--SCCEEEECSTT--HHHHHHTCEEEEETTCC--E---EESCCCEESCHHH-HCCCSE
T ss_pred CEEEEECcCHHHHHHHHHHHHC--CCeEEEEEcCc--HHHHHhCCCEEEcCCCe--E---EEeeceeecCHHH-cCCCCE
Confidence 7999999999999999999999 99999999986 47777543322111000 0 0012345677765 789999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhccCCCceEEeeCCccccc
Q 017997 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEFLAE 161 (362)
Q Consensus 82 Vii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~~~~ 161 (362)
||+|||+. .+.++++.+.++++++++|+... ...+..+.+.+.+..... ....+..+-.+..|
T Consensus 73 vilavk~~---------------~~~~~l~~l~~~l~~~~~iv~l~-nGi~~~~~l~~~~~~~~v-~~~~~~~~a~~~~p 135 (312)
T 3hn2_A 73 VLVGLKTF---------------ANSRYEELIRPLVEEGTQILTLQ-NGLGNEEALATLFGAERI-IGGVAFLCSNRGEP 135 (312)
T ss_dssp EEECCCGG---------------GGGGHHHHHGGGCCTTCEEEECC-SSSSHHHHHHHHTCGGGE-EEEEEEEECCBCSS
T ss_pred EEEecCCC---------------CcHHHHHHHHhhcCCCCEEEEec-CCCCcHHHHHHHCCCCcE-EEEEEEeeeEEcCC
Confidence 99999853 23578889999999888776422 223334556665543210 00011122234455
Q ss_pred CccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCcEEeCChhHHHHHHHHHhHH-------------------
Q 017997 162 GTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAF------------------- 222 (362)
Q Consensus 162 g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ae~~Kl~~N~~------------------- 222 (362)
|...+. .+..+.+|..+.. +.+..+.+.++|+..+- ......|+...+|.|++-|+.
T Consensus 136 ~~v~~~--~~g~~~ig~~~~~-~~~~~~~l~~~l~~~g~-~~~~~~di~~~~w~Kl~~N~~~n~l~al~~~~~G~l~~~~ 211 (312)
T 3hn2_A 136 GEVHHL--GAGRIILGEFLPR-DTGRIEELAAMFRQAGV-DCRTTDDLKRARWEKLVWNIPFNGLCALLQQPVNLILARD 211 (312)
T ss_dssp SEEEEC--EEEEEEEEESSCC-CSHHHHHHHHHHHHTTC-CEEECSCHHHHHHHHHHHHHHHHHHHHHHTCCHHHHTTSH
T ss_pred cEEEEC--CCCeEEEecCCCC-ccHHHHHHHHHHHhCCC-CcEEChHHHHHHHHHHHHHHhHHHHHHHHCCCHHHHHhCh
Confidence 655432 2335778865322 24567888899987642 234457999999999987772
Q ss_pred --HHHHHHHHHHHHHHHHHhC--CC-----HHHHHHHhcCCCCC-CCCC--ccCCCCCcccChhHh--HHHHHHHHHhCC
Q 017997 223 --LAQRISSVNAMSALCEATG--AN-----VSQVAFAVGTDSRI-GPKF--LNASVGFGGSCFQKD--ILNLVYICECNG 288 (362)
Q Consensus 223 --~~~~ia~~nE~~~l~~~~g--~d-----~~~v~~~~~~~~~i-~~~~--~~~g~g~gg~cl~kD--~~~l~~~a~~~g 288 (362)
+.+....+.|+.+++++.| ++ .+.+++.....++. .++. +..| .-..-| ..++++.|+++|
T Consensus 212 ~~~~l~~~~~~E~~~va~a~G~~~~~~~~~~~~~~~~~~~~~~~~sSM~qD~~~g-----r~tEid~i~G~vv~~a~~~g 286 (312)
T 3hn2_A 212 VSRKLVRGIMLEVIAGANAQGLATFIADGYVDDMLEFTDAMGEYKPSMEIDREEG-----RPLEIAAIFRTPLAYGAREG 286 (312)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCCSSCCCTTHHHHHHHHHTTSCSCCCHHHHHHHTT-----CCCCHHHHTHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHHHHHHcCCccCCCHHHHHHHHHHHhcCCCCCchHHHHHHhC-----CCccHHHHhhHHHHHHHHhC
Confidence 4566788999999999999 65 34445444322211 0000 0011 001111 337888999999
Q ss_pred CchhHHHHH
Q 017997 289 LPEVAEYWK 297 (362)
Q Consensus 289 ~~~~~~~~~ 297 (362)
++ .|+.+
T Consensus 287 v~--~P~~~ 293 (312)
T 3hn2_A 287 IA--MPRVE 293 (312)
T ss_dssp CC--CHHHH
T ss_pred CC--CCHHH
Confidence 98 56444
No 70
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=99.68 E-value=2.2e-15 Score=141.53 Aligned_cols=244 Identities=14% Similarity=0.135 Sum_probs=155.6
Q ss_pred CceEEEEcCChhHHHHHHHHHHcCCC----CeEEEEeCCHH--HHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHh
Q 017997 1 MVKICCIGAGYVGGPTMAVIALKCPS----IEVAVVDISVS--RINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEK 74 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~la~~~~G----~~V~~~d~~~~--~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~ 74 (362)
+|||+|||+|.||.++|..|+++ | ++|++||++++ +++.+++. .++++++..+
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~--G~~~~~~V~v~~r~~~~~~~~~l~~~-------------------G~~~~~~~~e 80 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAA--GVLAAHKIMASSPDMDLATVSALRKM-------------------GVKLTPHNKE 80 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHT--TSSCGGGEEEECSCTTSHHHHHHHHH-------------------TCEEESCHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHC--CCCCcceEEEECCCccHHHHHHHHHc-------------------CCEEeCChHH
Confidence 37999999999999999999998 8 89999999986 77777531 2566778888
Q ss_pred hhcCCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeC-CccccHHHHHHHHHhccCCCceEEe
Q 017997 75 HVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKST-VPVKTAEAIEKILTHNSKGIKFQIL 153 (362)
Q Consensus 75 a~~~aDvVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~ST-v~~gt~~~l~~~l~~~~~g~~~~v~ 153 (362)
+++++|+||+||| |. .+.++++++.+.++++++|+..++ ++. +.+.+.+.+...+.. .+.
T Consensus 81 ~~~~aDvVilav~-~~--------------~~~~vl~~l~~~l~~~~ivvs~s~gi~~---~~l~~~l~~~~~~~~-vv~ 141 (322)
T 2izz_A 81 TVQHSDVLFLAVK-PH--------------IIPFILDEIGADIEDRHIVVSCAAGVTI---SSIEKKLSAFRPAPR-VIR 141 (322)
T ss_dssp HHHHCSEEEECSC-GG--------------GHHHHHHHHGGGCCTTCEEEECCTTCCH---HHHHHHHHTTSSCCE-EEE
T ss_pred HhccCCEEEEEeC-HH--------------HHHHHHHHHHhhcCCCCEEEEeCCCCCH---HHHHHHHhhcCCCCe-EEE
Confidence 8899999999998 32 367888899998988998887654 443 445555654311112 233
Q ss_pred eCCcccccCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCcEEeCChhHHHHHHHH--HhHHHHHHHHHHH
Q 017997 154 SNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLA--ANAFLAQRISSVN 231 (362)
Q Consensus 154 ~~Pe~~~~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ae~~Kl~--~N~~~~~~ia~~n 231 (362)
..|..... . .....++.++... +++..+.++++|+.++ .+++..+-....+..+. .|.|.+ .+++
T Consensus 142 ~~p~~p~~--~----~~g~~v~~~g~~~--~~~~~~~v~~ll~~~G--~~~~~~e~~~~~~~a~~g~gpa~~~---~~~e 208 (322)
T 2izz_A 142 CMTNTPVV--V----REGATVYATGTHA--QVEDGRLMEQLLSSVG--FCTEVEEDLIDAVTGLSGSGPAYAF---TALD 208 (322)
T ss_dssp EECCGGGG--G----TCEEEEEEECTTC--CHHHHHHHHHHHHTTE--EEEECCGGGHHHHHHHTTTHHHHHH---HHHH
T ss_pred EeCCcHHH--H----cCCeEEEEeCCCC--CHHHHHHHHHHHHhCC--CEEEeCHHHHHHHHHHhcCHHHHHH---HHHH
Confidence 33421111 1 1111355555432 3678899999999986 34544422223344443 244433 4555
Q ss_pred HHHHHHHHhCCCHHHHHHHhcCCCCCCC-CCc-----cC--------CCCCcccChhHhHHHHHHHHHhCCCchhHHHHH
Q 017997 232 AMSALCEATGANVSQVAFAVGTDSRIGP-KFL-----NA--------SVGFGGSCFQKDILNLVYICECNGLPEVAEYWK 297 (362)
Q Consensus 232 E~~~l~~~~g~d~~~v~~~~~~~~~i~~-~~~-----~~--------g~g~gg~cl~kD~~~l~~~a~~~g~~~~~~~~~ 297 (362)
.+...+.+.|+|.+...+++.... .+. .++ .| ++| | .+...++.+++.|++ ..+.+
T Consensus 209 ala~a~~~~Gl~~~~a~~l~~~~~-~g~~~~~~~~~~~p~~l~~~v~sp~--g-----~t~~~l~~l~~~g~~--~~~~~ 278 (322)
T 2izz_A 209 ALADGGVKMGLPRRLAVRLGAQAL-LGAAKMLLHSEQHPGQLKDNVSSPG--G-----ATIHALHVLESGGFR--SLLIN 278 (322)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHH-HHHHHHHHHCSSCHHHHHHHHCCTT--S-----HHHHHHHHHHHTTHH--HHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHH-HHHHHHHHhcCCCHHHHHHhCCCCC--c-----HHHHHHHHHHHCCHH--HHHHH
Confidence 666667889999988887765321 010 010 11 122 1 233566677788887 67778
Q ss_pred HHHHHHHHhH
Q 017997 298 QVIKINDYQK 307 (362)
Q Consensus 298 ~~~~~N~~~~ 307 (362)
++.+.+++..
T Consensus 279 av~~~~~ra~ 288 (322)
T 2izz_A 279 AVEASCIRTR 288 (322)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8777777654
No 71
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=99.67 E-value=1.3e-15 Score=143.05 Aligned_cols=258 Identities=16% Similarity=0.115 Sum_probs=157.8
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcE
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (362)
|||+|||+|.||+.+|..|+++ |++|++|++++ .+.+++.+..+......+. ....+.++++++++.+++|+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~--g~~V~~~~r~~--~~~i~~~Gl~~~~~~~g~~----~~~~~~~~~~~~~~~~~~Dl 74 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKT--GHCVSVVSRSD--YETVKAKGIRIRSATLGDY----TFRPAAVVRSAAELETKPDC 74 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHT--TCEEEEECSTT--HHHHHHHCEEEEETTTCCE----EECCSCEESCGGGCSSCCSE
T ss_pred CEEEEECcCHHHHHHHHHHHhC--CCeEEEEeCCh--HHHHHhCCcEEeecCCCcE----EEeeeeeECCHHHcCCCCCE
Confidence 7999999999999999999999 99999999986 3777653322111000000 00023456787775559999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhccCCCceEEeeCC-----
Q 017997 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNP----- 156 (362)
Q Consensus 82 Vii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~P----- 156 (362)
||+|||+.. +.++++.+.++++++++|+... ...+..+.+.+.+... .++++|
T Consensus 75 VilavK~~~---------------~~~~l~~l~~~l~~~t~Iv~~~-nGi~~~~~l~~~~~~~------~vl~g~~~~~a 132 (320)
T 3i83_A 75 TLLCIKVVE---------------GADRVGLLRDAVAPDTGIVLIS-NGIDIEPEVAAAFPDN------EVISGLAFIGV 132 (320)
T ss_dssp EEECCCCCT---------------TCCHHHHHTTSCCTTCEEEEEC-SSSSCSHHHHHHSTTS------CEEEEEEEEEE
T ss_pred EEEecCCCC---------------hHHHHHHHHhhcCCCCEEEEeC-CCCChHHHHHHHCCCC------cEEEEEEEece
Confidence 999998643 2457788999998888776433 2333345565555432 122333
Q ss_pred cccccCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCcEEeCChhHHHHHHHHHhHH--------------
Q 017997 157 EFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAF-------------- 222 (362)
Q Consensus 157 e~~~~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ae~~Kl~~N~~-------------- 222 (362)
.+..||...+. .+..+.+|..+.. +.+..+.+.++|+..+- ......|+...+|.|++-|+.
T Consensus 133 ~~~~pg~v~~~--~~~~~~ig~~~~~-~~~~~~~l~~~l~~~~~-~~~~~~di~~~~w~Kl~~N~~~N~ltal~~~~~g~ 208 (320)
T 3i83_A 133 TRTAPGEIWHQ--AYGRLMLGNYPGG-VSERVKTLAAAFEEAGI-DGIATENITTARWQKCVWNAAFNPLSVLSGGLDTL 208 (320)
T ss_dssp EEEETTEEEEE--EEEEEEEEESSSC-CCHHHHHHHHHHHHTTS-CEEECSCHHHHHHHHHHHHHHHHHHHHHTTSCCHH
T ss_pred EEcCCCEEEEC--CCCEEEEecCCCC-ccHHHHHHHHHHHhCCC-CceECHHHHHHHHHHHHHHHhhhHHHHHHCCCHHH
Confidence 23344554332 2346778854321 23567888899987542 244567999999999998752
Q ss_pred ------HHHHHHHHHHHHHHHHHhCCCH-----HHHHHHhcCCCCC-CCCCc--cCCCCCcccChhHhHHHHHHHHHhCC
Q 017997 223 ------LAQRISSVNAMSALCEATGANV-----SQVAFAVGTDSRI-GPKFL--NASVGFGGSCFQKDILNLVYICECNG 288 (362)
Q Consensus 223 ------~~~~ia~~nE~~~l~~~~g~d~-----~~v~~~~~~~~~i-~~~~~--~~g~g~gg~cl~kD~~~l~~~a~~~g 288 (362)
+.+....+.|+..++++.|+++ +.+++.....+.. .++.. ..|-. .=+--=..++++.|+++|
T Consensus 209 ~~~~~~~~l~~~~~~E~~~va~a~G~~l~~~~~~~~~~~~~~~~~~~sSM~qD~~~gr~---tEid~i~G~vv~~a~~~g 285 (320)
T 3i83_A 209 DILSTQEGFVRAIMQEIRAVAAANGHPLPEDIVEKNVASTYKMPPYKTSMLVDFEAGQP---METEVILGNAVRAGRRTR 285 (320)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHHTTCCCCTTHHHHHHHHHHHSCCCCCHHHHHHHHTCC---CCHHHHTHHHHHHHHHTT
T ss_pred HHhCcHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHhcCCCCCCcHHHHHHhCCC---chHHHHccHHHHHHHHhC
Confidence 3456789999999999999763 3344443322111 00000 00100 001111337888999999
Q ss_pred CchhHHHHHH
Q 017997 289 LPEVAEYWKQ 298 (362)
Q Consensus 289 ~~~~~~~~~~ 298 (362)
++ .|+.+.
T Consensus 286 v~--~P~~~~ 293 (320)
T 3i83_A 286 VA--IPHLES 293 (320)
T ss_dssp CC--CHHHHH
T ss_pred CC--CCHHHH
Confidence 98 665443
No 72
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=99.65 E-value=2.7e-15 Score=139.43 Aligned_cols=179 Identities=16% Similarity=0.119 Sum_probs=124.9
Q ss_pred ceEEEEc-CChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCc
Q 017997 2 VKICCIG-AGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (362)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (362)
+||+||| +|+||.++|..|++. |++|++||++++. +..+++++||
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~--G~~V~~~~~~~~~--------------------------------~~~~~~~~aD 67 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRAS--GYPISILDREDWA--------------------------------VAESILANAD 67 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTT--TCCEEEECTTCGG--------------------------------GHHHHHTTCS
T ss_pred CEEEEEcCCCHHHHHHHHHHHhC--CCeEEEEECCccc--------------------------------CHHHHhcCCC
Confidence 5899999 999999999999998 9999999987531 2345688999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhccCCCceEEeeCCcccc
Q 017997 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEFLA 160 (362)
Q Consensus 81 vVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~~~ 160 (362)
+||+|||.+ .+.++++++.++++++++|++.+++.....+.+.+.+ +.. ++..+|.+..
T Consensus 68 vVilavp~~---------------~~~~vl~~l~~~l~~~~iv~~~~svk~~~~~~~~~~~-----~~~-~v~~hP~~g~ 126 (298)
T 2pv7_A 68 VVIVSVPIN---------------LTLETIERLKPYLTENMLLADLTSVKREPLAKMLEVH-----TGA-VLGLHPMFGA 126 (298)
T ss_dssp EEEECSCGG---------------GHHHHHHHHGGGCCTTSEEEECCSCCHHHHHHHHHHC-----SSE-EEEEEECSCT
T ss_pred EEEEeCCHH---------------HHHHHHHHHHhhcCCCcEEEECCCCCcHHHHHHHHhc-----CCC-EEeeCCCCCC
Confidence 999999853 2578888999999999999888877665555543322 112 3445564332
Q ss_pred cCccccccCCCCeEEEe-cCCCcchHHHHHHHHHHHhccCCCCcEEeCC-hhHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Q 017997 161 EGTAIQDLFNPDRVLIG-GRETPEGQKAVKALKDVYAHWVPEDRILTTN-LWSAELSKLAANAFLAQRISSVNAMSALCE 238 (362)
Q Consensus 161 ~g~a~~~~~~~~~viiG-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~~ 238 (362)
+. +.+....+++. +. +++..+.++++|+.++ .+++.++ ....++++++.+....+.+++++.+..
T Consensus 127 ~~----~~~~g~~~~l~~~~----~~~~~~~v~~l~~~~G--~~~~~~~~~~~d~~~a~~~~~p~~~a~~l~~~l~~--- 193 (298)
T 2pv7_A 127 DI----ASMAKQVVVRCDGR----FPERYEWLLEQIQIWG--AKIYQTNATEHDHNMTYIQALRHFSTFANGLHLSK--- 193 (298)
T ss_dssp TC----SCCTTCEEEEEEEE----CGGGTHHHHHHHHHTT--CEEEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTT---
T ss_pred Cc----hhhcCCeEEEecCC----CHHHHHHHHHHHHHcC--CEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHh---
Confidence 21 12222223333 22 2567889999999986 3555555 445889999999877777788777652
Q ss_pred HhCCCHHHHHH
Q 017997 239 ATGANVSQVAF 249 (362)
Q Consensus 239 ~~g~d~~~v~~ 249 (362)
.|.+.++..+
T Consensus 194 -~g~~~~~~~~ 203 (298)
T 2pv7_A 194 -QPINLANLLA 203 (298)
T ss_dssp -SSCCHHHHHH
T ss_pred -cCCCHHHHHh
Confidence 6676655544
No 73
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=99.64 E-value=1.8e-14 Score=132.66 Aligned_cols=197 Identities=14% Similarity=0.169 Sum_probs=128.3
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCC---eEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcC
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSI---EVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSE 78 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~---~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~ 78 (362)
|||+|||+|.||.++|..|+++ |+ +|++||+++++++.+.+. -++..+++..+++++
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~--g~~~~~V~v~dr~~~~~~~l~~~------------------~gi~~~~~~~~~~~~ 63 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIAN--GYDPNRICVTNRSLDKLDFFKEK------------------CGVHTTQDNRQGALN 63 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHT--TCCGGGEEEECSSSHHHHHHHHT------------------TCCEEESCHHHHHSS
T ss_pred CEEEEEcccHHHHHHHHHHHHC--CCCCCeEEEEeCCHHHHHHHHHH------------------cCCEEeCChHHHHhc
Confidence 7999999999999999999999 88 999999999999988762 135677788888999
Q ss_pred CcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhh-cCCCCEEEEeeCCccccHHHHHHHHHhccCCCceEEeeCCc
Q 017997 79 ADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADV-SKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPE 157 (362)
Q Consensus 79 aDvVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~-l~~~~iVv~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe 157 (362)
+|+||+|||. . .+.++++++.++ ++++++|+. ....-+.+.+.+.+... .. .+-.+|.
T Consensus 64 aDvVilav~p-~--------------~~~~vl~~l~~~~l~~~~iiiS--~~agi~~~~l~~~l~~~---~~-vvr~mPn 122 (280)
T 3tri_A 64 ADVVVLAVKP-H--------------QIKMVCEELKDILSETKILVIS--LAVGVTTPLIEKWLGKA---SR-IVRAMPN 122 (280)
T ss_dssp CSEEEECSCG-G--------------GHHHHHHHHHHHHHTTTCEEEE--CCTTCCHHHHHHHHTCC---SS-EEEEECC
T ss_pred CCeEEEEeCH-H--------------HHHHHHHHHHhhccCCCeEEEE--ecCCCCHHHHHHHcCCC---Ce-EEEEecC
Confidence 9999999973 1 357888999988 888877763 22222245565555432 11 2333443
Q ss_pred ccccCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCcEEeCChh-HHHHHHHH--HhHHHHHHHHHHHHHH
Q 017997 158 FLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLW-SAELSKLA--ANAFLAQRISSVNAMS 234 (362)
Q Consensus 158 ~~~~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~ae~~Kl~--~N~~~~~~ia~~nE~~ 234 (362)
.. ... ......+..+.. .+++..+.++++|+.++ ..+.+.+-. ...++-+. .++|.. .++.-+.
T Consensus 123 ~p--~~v----~~g~~~l~~~~~--~~~~~~~~v~~l~~~iG--~~~~v~~E~~~d~~talsgsgpa~~~---~~~eal~ 189 (280)
T 3tri_A 123 TP--SSV----RAGATGLFANET--VDKDQKNLAESIMRAVG--LVIWVSSEDQIEKIAALSGSGPAYIF---LIMEALQ 189 (280)
T ss_dssp GG--GGG----TCEEEEEECCTT--SCHHHHHHHHHHHGGGE--EEEECSSHHHHHHHHHHTTSHHHHHH---HHHHHHH
T ss_pred Ch--HHh----cCccEEEEeCCC--CCHHHHHHHHHHHHHCC--CeEEECCHHHhhHHHHHhccHHHHHH---HHHHHHH
Confidence 21 111 111123333332 25788999999999986 344443322 11222222 234443 3344444
Q ss_pred HHHHHhCCCHHHHHHHhc
Q 017997 235 ALCEATGANVSQVAFAVG 252 (362)
Q Consensus 235 ~l~~~~g~d~~~v~~~~~ 252 (362)
..+.+.|++.++..+++.
T Consensus 190 ~a~v~~Gl~~~~a~~l~~ 207 (280)
T 3tri_A 190 EAAEQLGLTKETAELLTE 207 (280)
T ss_dssp HHHHHTTCCHHHHHHHHH
T ss_pred HHHHHcCCCHHHHHHHHH
Confidence 557789999988887765
No 74
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=99.64 E-value=6.8e-15 Score=138.69 Aligned_cols=186 Identities=12% Similarity=0.088 Sum_probs=124.3
Q ss_pred CceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhc---
Q 017997 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS--- 77 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~--- 77 (362)
+|||+|||+|.||.++|..|.+. |++|++||+++++++.+.+. ++..+++++++++
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~--G~~V~~~dr~~~~~~~a~~~-------------------G~~~~~~~~e~~~~a~ 66 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAA--NHSVFGYNRSRSGAKSAVDE-------------------GFDVSADLEATLQRAA 66 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHT--TCCEEEECSCHHHHHHHHHT-------------------TCCEESCHHHHHHHHH
T ss_pred CCEEEEEeecHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHc-------------------CCeeeCCHHHHHHhcc
Confidence 37999999999999999999999 99999999999998876642 1234567766555
Q ss_pred -CCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhccCCCceEEeeCC
Q 017997 78 -EADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNP 156 (362)
Q Consensus 78 -~aDvVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~P 156 (362)
++|+||+|||. ..+.++++++.+. +++++|++.+++.+...+.+.+.+. +.. ++..+|
T Consensus 67 ~~aDlVilavP~---------------~~~~~vl~~l~~~-~~~~iv~Dv~Svk~~i~~~~~~~~~----~~~-~v~~HP 125 (341)
T 3ktd_A 67 AEDALIVLAVPM---------------TAIDSLLDAVHTH-APNNGFTDVVSVKTAVYDAVKARNM----QHR-YVGSHP 125 (341)
T ss_dssp HTTCEEEECSCH---------------HHHHHHHHHHHHH-CTTCCEEECCSCSHHHHHHHHHTTC----GGG-EECEEE
T ss_pred cCCCEEEEeCCH---------------HHHHHHHHHHHcc-CCCCEEEEcCCCChHHHHHHHHhCC----CCc-EecCCc
Confidence 47999999983 2457788888886 7889999888887665555544332 112 344455
Q ss_pred ----cccccCccccccCCCCeEEEecCCCcchHH--------HHHHHHHHHhccCCCCcEEeCChh-HHHHHHHHHhHHH
Q 017997 157 ----EFLAEGTAIQDLFNPDRVLIGGRETPEGQK--------AVKALKDVYAHWVPEDRILTTNLW-SAELSKLAANAFL 223 (362)
Q Consensus 157 ----e~~~~g~a~~~~~~~~~viiG~~~~~~~~~--------~~~~~~~l~~~~~~~~~~~~~~~~-~ae~~Kl~~N~~~ 223 (362)
|+.++..+..+++....+++... ...+++ .++.++++|+.++ ..+..+++. .-.++.++...-.
T Consensus 126 maG~e~sG~~aa~~~Lf~g~~~iltp~-~~~~~e~~~~~~~~~~~~v~~l~~~~G--a~v~~~~~~~HD~~~A~vshlPh 202 (341)
T 3ktd_A 126 MAGTANSGWSASMDGLFKRAVWVVTFD-QLFDGTDINSTWISIWKDVVQMALAVG--AEVVPSRVGPHDAAAARVSHLTH 202 (341)
T ss_dssp CCSCC-CCGGGCCSSTTTTCEEEECCG-GGTSSCCCCHHHHHHHHHHHHHHHHTT--CEEEECCHHHHHHHHHHHTHHHH
T ss_pred cccccccchhhhhhHHhcCCeEEEEeC-CCCChhhhccchHHHHHHHHHHHHHcC--CEEEEeCHHHHHHHHHHHhHHHH
Confidence 33444445556665544444321 111245 7899999999986 355555553 4556666666654
Q ss_pred HHHHHHHH
Q 017997 224 AQRISSVN 231 (362)
Q Consensus 224 ~~~ia~~n 231 (362)
.+..++++
T Consensus 203 ~ia~aL~~ 210 (341)
T 3ktd_A 203 ILAETLAI 210 (341)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 44444443
No 75
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=99.63 E-value=1.2e-14 Score=132.01 Aligned_cols=193 Identities=11% Similarity=0.166 Sum_probs=127.2
Q ss_pred CceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCc
Q 017997 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (362)
||||+|||+|.||..++..|++. |++|.+||+++++.+.+.+.. .+..+++++++++++|
T Consensus 3 ~m~i~iiG~G~mG~~~a~~l~~~--g~~v~~~~~~~~~~~~~~~~~------------------g~~~~~~~~~~~~~~D 62 (259)
T 2ahr_A 3 AMKIGIIGVGKMASAIIKGLKQT--PHELIISGSSLERSKEIAEQL------------------ALPYAMSHQDLIDQVD 62 (259)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTS--SCEEEEECSSHHHHHHHHHHH------------------TCCBCSSHHHHHHTCS
T ss_pred ccEEEEECCCHHHHHHHHHHHhC--CCeEEEECCCHHHHHHHHHHc------------------CCEeeCCHHHHHhcCC
Confidence 68999999999999999999988 899999999999998876410 1334567888788999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEee-CCccccHHHHHHHHHhccCCCceEEeeCC---
Q 017997 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKS-TVPVKTAEAIEKILTHNSKGIKFQILSNP--- 156 (362)
Q Consensus 81 vVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~S-Tv~~gt~~~l~~~l~~~~~g~~~~v~~~P--- 156 (362)
+||+|+| |. .+.++++. +.++++|+..+ ++++. .+.+.++. +..+ +-..|
T Consensus 63 ~Vi~~v~-~~--------------~~~~v~~~----l~~~~~vv~~~~~~~~~---~l~~~~~~---~~~~-v~~~p~~~ 116 (259)
T 2ahr_A 63 LVILGIK-PQ--------------LFETVLKP----LHFKQPIISMAAGISLQ---RLATFVGQ---DLPL-LRIMPNMN 116 (259)
T ss_dssp EEEECSC-GG--------------GHHHHHTT----SCCCSCEEECCTTCCHH---HHHHHHCT---TSCE-EEEECCGG
T ss_pred EEEEEeC-cH--------------hHHHHHHH----hccCCEEEEeCCCCCHH---HHHHhcCC---CCCE-EEEcCCch
Confidence 9999998 32 12444433 44777777653 46543 34444432 1122 21222
Q ss_pred cccccCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCcEEeCChhHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 017997 157 EFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRISSVNAMSAL 236 (362)
Q Consensus 157 e~~~~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l 236 (362)
.....| ...++.|+.. +++..+.++++|+.++ ..++........+.++..+.. +....+++.++..
T Consensus 117 ~~~~~g--------~~~i~~~~~~---~~~~~~~~~~ll~~~G--~~~~~~~~~~d~~~al~g~~~-~~~~~~~~~la~~ 182 (259)
T 2ahr_A 117 AQILQS--------STALTGNALV---SQELQARVRDLTDSFG--STFDISEKDFDTFTALAGSSP-AYIYLFIEALAKA 182 (259)
T ss_dssp GGGTCE--------EEEEEECTTC---CHHHHHHHHHHHHTTE--EEEECCGGGHHHHHHHHTTHH-HHHHHHHHHHHHH
T ss_pred HHHcCc--------eEEEEcCCCC---CHHHHHHHHHHHHhCC--CEEEecHHHccHHHHHhccHH-HHHHHHHHHHHHH
Confidence 222221 1123333321 3788999999999986 344555556677777754331 1234566777777
Q ss_pred HHHhCCCHHHHHHHhcC
Q 017997 237 CEATGANVSQVAFAVGT 253 (362)
Q Consensus 237 ~~~~g~d~~~v~~~~~~ 253 (362)
+++.|+|.+++.+++..
T Consensus 183 ~~~~Gl~~~~~~~~~~~ 199 (259)
T 2ahr_A 183 GVKNGIPKAKALEIVTQ 199 (259)
T ss_dssp HHHTTCCHHHHHHHHHH
T ss_pred HHHcCCCHHHHHHHHHH
Confidence 99999999999888763
No 76
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=99.61 E-value=8.1e-15 Score=129.08 Aligned_cols=185 Identities=15% Similarity=0.109 Sum_probs=125.5
Q ss_pred ceEEEEc-CChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCc
Q 017997 2 VKICCIG-AGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (362)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (362)
|||+||| +|.||..++..|++. |++|+++|+++++.+.+.+.. ...+ ....+.. +++.++++++|
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~--g~~V~~~~r~~~~~~~~~~~~--------~~~~---~~~~~~~-~~~~~~~~~~D 66 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATL--GHEIVVGSRREEKAEAKAAEY--------RRIA---GDASITG-MKNEDAAEACD 66 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTT--TCEEEEEESSHHHHHHHHHHH--------HHHH---SSCCEEE-EEHHHHHHHCS
T ss_pred CeEEEEcCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHh--------cccc---ccCCCCh-hhHHHHHhcCC
Confidence 7999999 999999999999998 999999999999888775420 0001 0123553 56777789999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeC-Ccc---------cc--HHHHHHHHHhccCCC
Q 017997 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKST-VPV---------KT--AEAIEKILTHNSKGI 148 (362)
Q Consensus 81 vVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~ST-v~~---------gt--~~~l~~~l~~~~~g~ 148 (362)
+||+|+|.+ .+.++++++.+.++ +++|+..++ +++ +. .+.+.+.+.. .
T Consensus 67 ~Vi~~~~~~---------------~~~~~~~~l~~~~~-~~~vi~~~~g~~~~~~~~~~~~g~~~~~~l~~~~~~----~ 126 (212)
T 1jay_A 67 IAVLTIPWE---------------HAIDTARDLKNILR-EKIVVSPLVPVSRGAKGFTYSSERSAAEIVAEVLES----E 126 (212)
T ss_dssp EEEECSCHH---------------HHHHHHHHTHHHHT-TSEEEECCCCEECCTTCCEECCSSCHHHHHHHHHTC----S
T ss_pred EEEEeCChh---------------hHHHHHHHHHHHcC-CCEEEEcCCCcCcCCceeecCCCCcHHHHHHHhCCC----C
Confidence 999998732 34667777777774 788887776 442 22 4666665542 2
Q ss_pred ceEEeeCCcccccCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhcc-CCCCcEEeCChhHHHHHHHHHhHHHHHH
Q 017997 149 KFQILSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHW-VPEDRILTTNLWSAELSKLAANAFLAQR 226 (362)
Q Consensus 149 ~~~v~~~Pe~~~~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~ae~~Kl~~N~~~~~~ 226 (362)
.+.-+++|.......... ......++++++ +++..+.++++|+.+ +. .+++..+.+.+.+.|.+.|.+..+.
T Consensus 127 ~~v~~~~~~~~~~~~~~~-~~~~~~~~~~g~----~~~~~~~v~~l~~~~~G~-~~~~~~~~~~a~~~k~~~~~~~~~~ 199 (212)
T 1jay_A 127 KVVSALHTIPAARFANLD-EKFDWDVPVCGD----DDESKKVVMSLISEIDGL-RPLDAGPLSNSRLVESLTPLILNIM 199 (212)
T ss_dssp CEEECCTTCCHHHHHCTT-CCCCEEEEEEES----CHHHHHHHHHHHHHSTTE-EEEEEESGGGHHHHHTHHHHHHHHH
T ss_pred eEEEEccchHHHHhhCcC-CCCCccEEEECC----cHHHHHHHHHHHHHcCCC-CceeccchhHHHHhcchHHHHHHHH
Confidence 333334465443332211 111113456665 278899999999998 73 4556678999999999999986543
No 77
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=99.60 E-value=1.4e-14 Score=131.83 Aligned_cols=190 Identities=9% Similarity=0.156 Sum_probs=119.2
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCC-CeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCc
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPS-IEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G-~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (362)
|||+|||+|.||..+|..|++. | ++|++||+++++++.+.+. -++..++++.+++ ++|
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~--g~~~v~~~~r~~~~~~~~~~~------------------~g~~~~~~~~~~~-~~D 59 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQ--GGYRIYIANRGAEKRERLEKE------------------LGVETSATLPELH-SDD 59 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--CSCEEEEECSSHHHHHHHHHH------------------TCCEEESSCCCCC-TTS
T ss_pred CEEEEECchHHHHHHHHHHHHC--CCCeEEEECCCHHHHHHHHHh------------------cCCEEeCCHHHHh-cCC
Confidence 7999999999999999999999 8 9999999999999888652 0245566776767 999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEe-eCCccccHHHHHHHHHhccCCCceEEe--eCCc
Q 017997 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEK-STVPVKTAEAIEKILTHNSKGIKFQIL--SNPE 157 (362)
Q Consensus 81 vVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~-STv~~gt~~~l~~~l~~~~~g~~~~v~--~~Pe 157 (362)
+||+||| |. .+.++++.+.+ + +++|+.. |++++ +.+.+.+.. +..+.-+ ..|.
T Consensus 60 ~vi~~v~-~~--------------~~~~v~~~l~~--~-~~ivv~~~~g~~~---~~l~~~~~~---~~~~v~~~~~~~~ 115 (263)
T 1yqg_A 60 VLILAVK-PQ--------------DMEAACKNIRT--N-GALVLSVAAGLSV---GTLSRYLGG---TRRIVRVMPNTPG 115 (263)
T ss_dssp EEEECSC-HH--------------HHHHHHTTCCC--T-TCEEEECCTTCCH---HHHHHHTTS---CCCEEEEECCGGG
T ss_pred EEEEEeC-ch--------------hHHHHHHHhcc--C-CCEEEEecCCCCH---HHHHHHcCC---CCcEEEEcCCHHH
Confidence 9999998 32 34566655544 4 7788776 56765 445444433 1122111 1232
Q ss_pred ccccCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCcEEeC-ChhHHHHHHHH--HhHHHHHHHHHHHHHH
Q 017997 158 FLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTT-NLWSAELSKLA--ANAFLAQRISSVNAMS 234 (362)
Q Consensus 158 ~~~~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~ae~~Kl~--~N~~~~~~ia~~nE~~ 234 (362)
....|.. .++.|+. .+++..+.++++|+.++ .+++.. +-....++-+. .+.+.. .++..+.
T Consensus 116 ~~~~g~~--------~i~~~~~---~~~~~~~~~~~l~~~~g--~~~~~~~~~~~~~~~al~g~~~~~~~---~~~~~l~ 179 (263)
T 1yqg_A 116 KIGLGVS--------GMYAEAE---VSETDRRIADRIMKSVG--LTVWLDDEEKMHGITGISGSGPAYVF---YLLDALQ 179 (263)
T ss_dssp GGTCEEE--------EEECCTT---SCHHHHHHHHHHHHTTE--EEEECSSTTHHHHHHHHTTSHHHHHH---HHHHHHH
T ss_pred HHcCceE--------EEEcCCC---CCHHHHHHHHHHHHhCC--CEEEeCChhhccHHHHHHccHHHHHH---HHHHHHH
Confidence 2222211 2333332 13778899999999876 344444 21122222221 233332 3444445
Q ss_pred HHHHHhCCCHHHHHHHhc
Q 017997 235 ALCEATGANVSQVAFAVG 252 (362)
Q Consensus 235 ~l~~~~g~d~~~v~~~~~ 252 (362)
..+++.|++.+++.+.+.
T Consensus 180 e~~~~~G~~~~~~~~~~~ 197 (263)
T 1yqg_A 180 NAAIRQGFDMAEARALSL 197 (263)
T ss_dssp HHHHHTTCCHHHHHHHHH
T ss_pred HHHHHcCCCHHHHHHHHH
Confidence 558889999988887763
No 78
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=99.59 E-value=2.3e-14 Score=130.32 Aligned_cols=187 Identities=13% Similarity=0.127 Sum_probs=123.1
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCC----CeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhc
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPS----IEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS 77 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G----~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~ 77 (362)
|||+|||+|.||.++|..|+++ | ++|++||+++++ . .+..++++.++++
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~--g~~~~~~v~~~~~~~~~-----~--------------------g~~~~~~~~~~~~ 57 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANA--NIIKKENLFYYGPSKKN-----T--------------------TLNYMSSNEELAR 57 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHH--TSSCGGGEEEECSSCCS-----S--------------------SSEECSCHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHC--CCCCCCeEEEEeCCccc-----C--------------------ceEEeCCHHHHHh
Confidence 7999999999999999999998 8 799999998765 1 1455677877789
Q ss_pred CCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhccCCCce--EEeeC
Q 017997 78 EADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKF--QILSN 155 (362)
Q Consensus 78 ~aDvVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~~~g~~~--~v~~~ 155 (362)
++|+||+|||.. .+.++++++.+.++++.+|.+.+++++. .+.+.+.+. ..+ ++..+
T Consensus 58 ~~D~vi~~v~~~---------------~~~~v~~~l~~~l~~~~vv~~~~gi~~~---~l~~~~~~~---~~~v~~~p~~ 116 (262)
T 2rcy_A 58 HCDIIVCAVKPD---------------IAGSVLNNIKPYLSSKLLISICGGLNIG---KLEEMVGSE---NKIVWVMPNT 116 (262)
T ss_dssp HCSEEEECSCTT---------------THHHHHHHSGGGCTTCEEEECCSSCCHH---HHHHHHCTT---SEEEEEECCG
T ss_pred cCCEEEEEeCHH---------------HHHHHHHHHHHhcCCCEEEEECCCCCHH---HHHHHhCCC---CcEEEECCCh
Confidence 999999999832 2577888888888544455666667664 344444331 111 11123
Q ss_pred CcccccCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCcEEeCChhHHHHHHHHH--hHHHHHHHHHHHHH
Q 017997 156 PEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAA--NAFLAQRISSVNAM 233 (362)
Q Consensus 156 Pe~~~~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ae~~Kl~~--N~~~~~~ia~~nE~ 233 (362)
|.....| ..++.++... +++..+.++++|+.++ .+++..+-....++++.. |.+. ..++..+
T Consensus 117 p~~~~~g---------~~~~~~~~~~--~~~~~~~~~~ll~~~G--~~~~~~~~~~~~~~a~~~~~~~~~---~~~~~al 180 (262)
T 2rcy_A 117 PCLVGEG---------SFIYCSNKNV--NSTDKKYVNDIFNSCG--IIHEIKEKDMDIATAISGCGPAYV---YLFIESL 180 (262)
T ss_dssp GGGGTCE---------EEEEEECTTC--CHHHHHHHHHHHHTSE--EEEECCGGGHHHHHHHTTSHHHHH---HHHHHHH
T ss_pred HHHHcCC---------eEEEEeCCCC--CHHHHHHHHHHHHhCC--CEEEeCHHHccHHHHHHccHHHHH---HHHHHHH
Confidence 3333221 1234444321 3788999999999986 344444333444555533 4443 4555556
Q ss_pred HHHHHHhCCCHHHHHHHhc
Q 017997 234 SALCEATGANVSQVAFAVG 252 (362)
Q Consensus 234 ~~l~~~~g~d~~~v~~~~~ 252 (362)
...+++.|++.++..+.+.
T Consensus 181 ~~~~~~~Gl~~~~~~~~~~ 199 (262)
T 2rcy_A 181 IDAGVKNGLSRELSKNLVL 199 (262)
T ss_dssp HHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHcCCCHHHHHHHHH
Confidence 6667889999988777765
No 79
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=99.58 E-value=8.1e-14 Score=134.85 Aligned_cols=219 Identities=16% Similarity=0.126 Sum_probs=129.7
Q ss_pred CceEEEEcCChhHHHHHHHHHH-cCCCCeEEEEe---CCHHHHHH-HHcCCCC--CCCCChHHHHhhhcCCCEE-EecCH
Q 017997 1 MVKICCIGAGYVGGPTMAVIAL-KCPSIEVAVVD---ISVSRINA-WNSDQLP--IYEPGLDGVVKQCRGKNLF-FSTDV 72 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~la~-~~~G~~V~~~d---~~~~~~~~-l~~~~~~--~~e~~l~~~~~~~~~~~l~-~t~d~ 72 (362)
||||+|||+|+||+.+|..|++ + ||+|++|| +++++++. ++++... ..+++.+.. . ...++. +++|+
T Consensus 2 ~mkI~ViGaG~~G~~~a~~La~~~--G~~V~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~-~--~~~~~~~~~~~~ 76 (404)
T 3c7a_A 2 TVKVCVCGGGNGAHTLSGLAASRD--GVEVRVLTLFADEAERWTKALGADELTVIVNEKDGTQT-E--VKSRPKVITKDP 76 (404)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTST--TEEEEEECCSTTHHHHHHHHHTTSCEEEEEECSSSCEE-E--EEECCSEEESCH
T ss_pred CceEEEECCCHHHHHHHHHHHhCC--CCEEEEEeCCCCcHHHHHHHHhhccceeeeecCCCccc-e--eeccceEEeCCH
Confidence 4899999999999999999987 6 89999999 98899988 4544311 111111000 0 011233 77888
Q ss_pred HhhhcCCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhccCCCce-E
Q 017997 73 EKHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKF-Q 151 (362)
Q Consensus 73 ~~a~~~aDvVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~~~g~~~-~ 151 (362)
+++++++|+||+|||++ .+.++++++.++++++++|+.. +...|......+.+.+.....-+ .
T Consensus 77 ~~a~~~aD~Vilav~~~---------------~~~~v~~~l~~~l~~~~ivv~~-~~~~G~~~~~~~~l~~~~~~~v~~~ 140 (404)
T 3c7a_A 77 EIAISGADVVILTVPAF---------------AHEGYFQAMAPYVQDSALIVGL-PSQAGFEFQCRDILGDKAAAVSMMS 140 (404)
T ss_dssp HHHHTTCSEEEECSCGG---------------GHHHHHHHHTTTCCTTCEEEET-TCCTTHHHHHHHHHGGGGGTSEEEE
T ss_pred HHHhCCCCEEEEeCchH---------------HHHHHHHHHHhhCCCCcEEEEc-CCCccHHHHHHHHHHhcCCCeEEEE
Confidence 88889999999999864 2477889999999988877652 12224332223344432111101 1
Q ss_pred EeeCCc---ccccCccccccCCCCeEEEecCCC--cchHHHHHHHHHHHhccCCCCcE-EeCChhHHHHHH---------
Q 017997 152 ILSNPE---FLAEGTAIQDLFNPDRVLIGGRET--PEGQKAVKALKDVYAHWVPEDRI-LTTNLWSAELSK--------- 216 (362)
Q Consensus 152 v~~~Pe---~~~~g~a~~~~~~~~~viiG~~~~--~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~ae~~K--------- 216 (362)
+...|. ...||.++.......++.+|.... ...++..+.++.+|.. ..+ ...|+...++.-
T Consensus 141 ~~~~~~~~~~~gpg~~v~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~----~~~~~~~di~~~~l~~N~~~~~~~~ 216 (404)
T 3c7a_A 141 FETLPWACRIKEFGRKVEVLGTKSVLAASLIKGTAKTVDPLSTLQMLHGAE----PVFRLAKHFLEMLIMSYSFVHPAIL 216 (404)
T ss_dssp ESSCSEEEEEEETTTEEEEEEECSEEEEEEECCSSCCSCHHHHHHHHHCSS----SEEEECSCHHHHHHTTCTTHHHHHH
T ss_pred ecCchHhhcccCCCcEEEEEEECceEEEEEccCCcchHHHHHHHHHHhCCC----CceeEcCCEeeeeecCCceeccHHH
Confidence 112332 234675554444444666675421 1123445555555431 102 233443222220
Q ss_pred -----------------HHHh---HHHHHHHHHHHHHHHHHHHh-----CCCH
Q 017997 217 -----------------LAAN---AFLAQRISSVNAMSALCEAT-----GANV 244 (362)
Q Consensus 217 -----------------l~~N---~~~~~~ia~~nE~~~l~~~~-----g~d~ 244 (362)
+..| ..+.+..+++.|+.++++++ |+++
T Consensus 217 l~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~E~~~va~a~~~~~~G~~~ 269 (404)
T 3c7a_A 217 FGRWGSWDGKPVPEAPLFYQGIDQATADMLTACSNECKDVANAIMAACPGNDL 269 (404)
T ss_dssp HHHHTTCCSCCBSSCCBSGGGCCHHHHHHHHHHHHHHHHHHHHHHHHSTTCCC
T ss_pred HHHHHhhhcCCCCCCCccccCCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCc
Confidence 2232 45677788999999999999 9876
No 80
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=99.57 E-value=2.3e-14 Score=126.29 Aligned_cols=155 Identities=17% Similarity=0.141 Sum_probs=108.2
Q ss_pred CceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCc
Q 017997 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (362)
+|||+|||+|.||.++|..|++. |++|++||++++ +++++|
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~--g~~V~~~~~~~~-------------------------------------~~~~aD 59 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIA--GHEVTYYGSKDQ-------------------------------------ATTLGE 59 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT--TCEEEEECTTCC-------------------------------------CSSCCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHC--CCEEEEEcCCHH-------------------------------------HhccCC
Confidence 47999999999999999999999 999999998632 267899
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeC-Cc-cc-------c----HHHHHHHHHhccCC
Q 017997 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKST-VP-VK-------T----AEAIEKILTHNSKG 147 (362)
Q Consensus 81 vVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~ST-v~-~g-------t----~~~l~~~l~~~~~g 147 (362)
+||+|+|+ ..+.++++++.+.++ +++|+..|+ ++ ++ + .+.+++.+. +
T Consensus 60 ~vi~av~~---------------~~~~~v~~~l~~~~~-~~~vi~~~~g~~~~~~~~l~~~~~~~~~~~l~~~l~----~ 119 (209)
T 2raf_A 60 IVIMAVPY---------------PALAALAKQYATQLK-GKIVVDITNPLNFDTWDDLVVPADSSAAQELQQQLP----D 119 (209)
T ss_dssp EEEECSCH---------------HHHHHHHHHTHHHHT-TSEEEECCCCBCTTTSSSBSSCTTCCHHHHHHHHCT----T
T ss_pred EEEEcCCc---------------HHHHHHHHHHHHhcC-CCEEEEECCCCCccccccccCCCCCcHHHHHHHHCC----C
Confidence 99999983 135778888888887 888887776 44 22 3 344444332 1
Q ss_pred Cce----EEeeCCcccccCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCcEEeCChhHHHHHHHHHhHH
Q 017997 148 IKF----QILSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAF 222 (362)
Q Consensus 148 ~~~----~v~~~Pe~~~~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ae~~Kl~~N~~ 222 (362)
..+ ...++|.+..+... + ..+..+++++. +++..+.++++|+.++. .++...+++.+.+.|.+.|.+
T Consensus 120 ~~vv~~~~~~~~p~~~~~~~~--g-~~~~~~~~~g~----~~~~~~~v~~ll~~~G~-~~~~~~~i~~a~~~K~i~~l~ 190 (209)
T 2raf_A 120 SQVLKAFNTTFAATLQSGQVN--G-KEPTTVLVAGN----DDSAKQRFTRALADSPL-EVKDAGKLKRARELEAMGFMQ 190 (209)
T ss_dssp SEEEECSTTSCHHHHHHSEET--T-TEECEEEEEES----CHHHHHHHHHHTTTSSC-EEEEEESGGGHHHHHHHHHHH
T ss_pred CcEEEeeecccHhhccccccC--C-CCCceeEEcCC----CHHHHHHHHHHHHHcCC-ceEeCCCHhHHHHhcchHHHH
Confidence 111 11235655443221 1 01224556765 26889999999999862 456677999999999888874
No 81
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=99.57 E-value=8.5e-15 Score=150.64 Aligned_cols=203 Identities=16% Similarity=0.177 Sum_probs=138.1
Q ss_pred CceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhh-------hcCCCEEEecCHH
Q 017997 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQ-------CRGKNLFFSTDVE 73 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~-------~~~~~l~~t~d~~ 73 (362)
+.||+|||+|.||..+|..++.+ |++|+++|++++.++...+... ..++..... ....+++.+++.+
T Consensus 316 i~~v~ViGaG~MG~gIA~~~a~a--G~~V~l~D~~~~~l~~~~~~i~----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (742)
T 3zwc_A 316 VSSVGVLGLGTMGRGIAISFARV--GISVVAVESDPKQLDAAKKIIT----FTLEKEASRAHQNGQASAKPKLRFSSSTK 389 (742)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT--TCEEEEECSSHHHHHHHHHHHH----HHHHHHHHHHHTTTCCCCCCCEEEESCGG
T ss_pred ccEEEEEcccHHHHHHHHHHHhC--CCchhcccchHhhhhhHHHHHH----HHHHHHHHhccccchhhhhhhhcccCcHH
Confidence 36899999999999999999999 9999999999988775443110 001111110 1235688899987
Q ss_pred hhhcCCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEE-EEeeCCccccHHHHHHHHHhccC--CCce
Q 017997 74 KHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIV-VEKSTVPVKTAEAIEKILTHNSK--GIKF 150 (362)
Q Consensus 74 ~a~~~aDvVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iV-v~~STv~~gt~~~l~~~l~~~~~--g~~~ 150 (362)
+ +++||+||.||+.. .+++ +++++++.+++++++|+ .++|++++... ...+..... |.||
T Consensus 390 ~-l~~aDlVIEAV~E~-----------l~iK--~~vf~~le~~~~~~aIlASNTSsl~i~~i---a~~~~~p~r~ig~HF 452 (742)
T 3zwc_A 390 E-LSTVDLVVEAVFED-----------MNLK--KKVFAELSALCKPGAFLCTNTSALNVDDI---ASSTDRPQLVIGTHF 452 (742)
T ss_dssp G-GGSCSEEEECCCSC-----------HHHH--HHHHHHHHHHSCTTCEEEECCSSSCHHHH---HTTSSCGGGEEEEEC
T ss_pred H-HhhCCEEEEecccc-----------HHHH--HHHHHHHhhcCCCCceEEecCCcCChHHH---HhhcCCccccccccc
Confidence 6 99999999999852 3444 88999999999999998 77888877532 211111111 2332
Q ss_pred EEeeCCcccccCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCcEEeCChhHHHHHHHHHhHHHHHHHHHH
Q 017997 151 QILSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRISSV 230 (362)
Q Consensus 151 ~v~~~Pe~~~~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ae~~Kl~~N~~~~~~ia~~ 230 (362)
++|.+..+ ...||-| ..| ++++++.+..+.+.++ +.++.+.|.. .++.|. +..+++
T Consensus 453 ---fnP~~~m~---------LVEvi~g-~~T--s~e~~~~~~~~~~~lg-K~pV~vkd~p-----GFi~NR---i~~~~~ 508 (742)
T 3zwc_A 453 ---FSPAHVMR---------LLEVIPS-RYS--SPTTIATVMSLSKKIG-KIGVVVGNCY-----GFVGNR---MLAPYY 508 (742)
T ss_dssp ---CSSTTTCC---------EEEEEEC-SSC--CHHHHHHHHHHHHHTT-CEEEECCCST-----TTTHHH---HHHHHH
T ss_pred ---cCCCCCCc---------eEEEecC-CCC--CHHHHHHHHHHHHHhC-CCCcccCCCC-----CccHHH---HhhHHH
Confidence 45654432 2246544 434 6899999999999987 4566665432 466777 356788
Q ss_pred HHHHHHHHHhCCCHHHHHHHh
Q 017997 231 NAMSALCEATGANVSQVAFAV 251 (362)
Q Consensus 231 nE~~~l~~~~g~d~~~v~~~~ 251 (362)
+|...+.+. |+++.++.+++
T Consensus 509 ~ea~~l~~e-G~~~~~id~a~ 528 (742)
T 3zwc_A 509 NQGFFLLEE-GSKPEDVDGVL 528 (742)
T ss_dssp HHHHHHHHT-TCCHHHHHHHH
T ss_pred HHHHHHHHc-CCCHHHHHHHH
Confidence 888777765 67777666665
No 82
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=99.55 E-value=3.7e-14 Score=131.45 Aligned_cols=191 Identities=13% Similarity=0.145 Sum_probs=123.1
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhh-cCCc
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHV-SEAD 80 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~-~~aD 80 (362)
|||+|||+|.||+.+|..|+++ |++|++|+|+++.++.... .+. .....+.+..+++ ..+|
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~--g~~V~~~~r~~~~~~~~~~-------~g~---------~~~~~~~~~~~~~~~~~D 64 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQS--LPHTTLIGRHAKTITYYTV-------PHA---------PAQDIVVKGYEDVTNTFD 64 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH--CTTCEEEESSCEEEEEESS-------TTS---------CCEEEEEEEGGGCCSCEE
T ss_pred cEEEEECCCHHHHHHHHHHHHC--CCeEEEEEeccCcEEEEec-------CCe---------eccceecCchHhcCCCCC
Confidence 7999999999999999999999 8999999998654331111 010 0122333444444 7899
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhccC--CCceEEeeCCcc
Q 017997 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSK--GIKFQILSNPEF 158 (362)
Q Consensus 81 vVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~~~--g~~~~v~~~Pe~ 158 (362)
+||+|||+. .+.++++.+.+.++++++|+.... ..+..+. +..... +. +..+-.+
T Consensus 65 ~vilavk~~---------------~~~~~l~~l~~~l~~~~~iv~~~n-Gi~~~~~----~~~~~v~~g~---~~~~a~~ 121 (294)
T 3g17_A 65 VIIIAVKTH---------------QLDAVIPHLTYLAHEDTLIILAQN-GYGQLEH----IPFKNVCQAV---VYISGQK 121 (294)
T ss_dssp EEEECSCGG---------------GHHHHGGGHHHHEEEEEEEEECCS-SCCCGGG----CCCSCEEECE---EEEEEEE
T ss_pred EEEEeCCcc---------------CHHHHHHHHHHhhCCCCEEEEecc-CcccHhh----CCCCcEEEEE---EEEEEEE
Confidence 999999842 357888899998888877764332 2222221 221110 10 0011123
Q ss_pred cccCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCcEEeCChhHHHHHHHHHhH-----------------
Q 017997 159 LAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANA----------------- 221 (362)
Q Consensus 159 ~~~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ae~~Kl~~N~----------------- 221 (362)
.+||.... .+.++.++ . .+..+.+.++|+..+- ......|+...+|.|++-|+
T Consensus 122 ~~pg~v~~---~~~~~~~~-~-----~~~~~~l~~~l~~~~~-~~~~~~di~~~~w~Kl~~N~~inl~al~~~~~g~~l~ 191 (294)
T 3g17_A 122 KGDVVTHF---RDYQLRIQ-D-----NALTRQFRDLVQDSQI-DIVLEANIQQAIWYKLLVNLGINSITALGRQTVAIMH 191 (294)
T ss_dssp ETTEEEEE---EEEEEEEE-C-----SHHHHHHHHHTTTSSC-EEEEESSHHHHHHHHHHHHHHHHHHHHHHTSCGGGGG
T ss_pred cCCCEEEE---CCCEEecC-c-----cHHHHHHHHHHHhCCC-ceEEChHHHHHHHHHHHHHHHHHHHHHHCCChHHHHc
Confidence 34454421 13455554 3 2457788889887541 23446799999999999887
Q ss_pred ---HHHHHHHHHHHHHHHHHHhCCC
Q 017997 222 ---FLAQRISSVNAMSALCEATGAN 243 (362)
Q Consensus 222 ---~~~~~ia~~nE~~~l~~~~g~d 243 (362)
.+.+....++|+..++++.|++
T Consensus 192 ~~~~~~l~~~~~~E~~~va~a~G~~ 216 (294)
T 3g17_A 192 NPEIRILCRQLLLDGCRVAQAEGLN 216 (294)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 2455668899999999999976
No 83
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=99.47 E-value=9.6e-14 Score=123.20 Aligned_cols=166 Identities=15% Similarity=0.180 Sum_probs=104.8
Q ss_pred CceEEEEcCChhHHHHHHHHHHcCCCCeEEE-EeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCC
Q 017997 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAV-VDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEA 79 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~la~~~~G~~V~~-~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~a 79 (362)
||||+|||+|+||..+|..|+++ |++|++ ||+++++++.+.+.. +....+++ .++++++
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~--g~~V~~v~~r~~~~~~~l~~~~-----------------g~~~~~~~-~~~~~~a 82 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAA--QIPAIIANSRGPASLSSVTDRF-----------------GASVKAVE-LKDALQA 82 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHT--TCCEEEECTTCGGGGHHHHHHH-----------------TTTEEECC-HHHHTTS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCEEEEEECCCHHHHHHHHHHh-----------------CCCcccCh-HHHHhcC
Confidence 57999999999999999999999 999999 999999988876420 11112334 4458999
Q ss_pred cEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeC-Cc-----cc------cHHHHHHHHHhccCC
Q 017997 80 DIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKST-VP-----VK------TAEAIEKILTHNSKG 147 (362)
Q Consensus 80 DvVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~ST-v~-----~g------t~~~l~~~l~~~~~g 147 (362)
|+||+|||.. .+.++++++.+ + ++++|+..++ ++ +. +.+.+++.+...
T Consensus 83 DvVilavp~~---------------~~~~v~~~l~~-~-~~~ivi~~~~g~~~~~~~~~~~~~~~~~~~l~~~l~~~--- 142 (220)
T 4huj_A 83 DVVILAVPYD---------------SIADIVTQVSD-W-GGQIVVDASNAIDFPAFKPRDLGGRLSTEIVSELVPGA--- 142 (220)
T ss_dssp SEEEEESCGG---------------GHHHHHTTCSC-C-TTCEEEECCCCBCTTTCCBCCCTTCCHHHHHHHHSTTC---
T ss_pred CEEEEeCChH---------------HHHHHHHHhhc-c-CCCEEEEcCCCCCcccccccccCCCcHHHHHHHHCCCC---
Confidence 9999999731 34667777766 4 4677766554 31 11 445666555421
Q ss_pred CceEEee--CCc-ccccCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCcEEeCChhHHHH
Q 017997 148 IKFQILS--NPE-FLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAEL 214 (362)
Q Consensus 148 ~~~~v~~--~Pe-~~~~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ae~ 214 (362)
.+.-++ .|. ....+.... ..+..+++++.+ +++.+.++++|+.++ ..++..+++..+.+
T Consensus 143 -~vv~~~~~~~~~v~~~g~~~~--~~~~~v~~~g~~----~~~~~~v~~l~~~~G-~~~~~~G~l~~a~~ 204 (220)
T 4huj_A 143 -KVVKAFNTLPAAVLAADPDKG--TGSRVLFLSGNH----SDANRQVAELISSLG-FAPVDLGTLAASGP 204 (220)
T ss_dssp -EEEEESCSSCHHHHTSCSBCS--SCEEEEEEEESC----HHHHHHHHHHHHHTT-CEEEECCSHHHHHH
T ss_pred -CEEECCCCCCHHHhhhCcccC--CCCeeEEEeCCC----HHHHHHHHHHHHHhC-CCeEeeCChhhcch
Confidence 111111 111 111111111 122345566653 789999999999987 34556677766544
No 84
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=99.41 E-value=1.4e-12 Score=123.22 Aligned_cols=167 Identities=17% Similarity=0.168 Sum_probs=107.6
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHH-HHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCc
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSR-INAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~-~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (362)
|+|+|||+|.||.++|..|.+. |++|+++|+++++ .+...+. ++..+ ++++++++||
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~--G~~V~~~~~~~~~~~~~a~~~-------------------G~~~~-~~~e~~~~aD 74 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDS--GVDVTVGLRSGSATVAKAEAH-------------------GLKVA-DVKTAVAAAD 74 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT--TCCEEEECCTTCHHHHHHHHT-------------------TCEEE-CHHHHHHTCS
T ss_pred CEEEEECchHHHHHHHHHHHHC--cCEEEEEECChHHHHHHHHHC-------------------CCEEc-cHHHHHhcCC
Confidence 7999999999999999999998 8999999998765 4433321 23444 7777889999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHH-HHHhhcCCCCEEEEeeCCccccHHHHHHHHHhcc-C-CCceEEeeCCc
Q 017997 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAAR-VIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNS-K-GIKFQILSNPE 157 (362)
Q Consensus 81 vVii~vptp~~~~g~~~~~~~d~~~l~~~~~-~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~~-~-g~~~~v~~~Pe 157 (362)
+||+|||.+ ...++++ ++.++++++++|++.+++.. . ++... . +.+ ++..+|
T Consensus 75 vVilavp~~---------------~~~~v~~~~i~~~l~~~~ivi~~~gv~~-----~---~~~~~~~~~~~-vv~~~P- 129 (338)
T 1np3_A 75 VVMILTPDE---------------FQGRLYKEEIEPNLKKGATLAFAHGFSI-----H---YNQVVPRADLD-VIMIAP- 129 (338)
T ss_dssp EEEECSCHH---------------HHHHHHHHHTGGGCCTTCEEEESCCHHH-----H---TTSSCCCTTCE-EEEEEE-
T ss_pred EEEEeCCcH---------------HHHHHHHHHHHhhCCCCCEEEEcCCchh-----H---HHhhcCCCCcE-EEeccC-
Confidence 999999842 2466777 88889999998886443221 1 11111 1 233 344567
Q ss_pred ccccCccccccC----CCCeE-EEecCCCcchHHHHHHHHHHHhccCCCCc--EEeCChh-HHHHHHHHHh
Q 017997 158 FLAEGTAIQDLF----NPDRV-LIGGRETPEGQKAVKALKDVYAHWVPEDR--ILTTNLW-SAELSKLAAN 220 (362)
Q Consensus 158 ~~~~g~a~~~~~----~~~~v-iiG~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~-~ae~~Kl~~N 220 (362)
..|+.+..+++ ..+.+ ...... ++++.+.+..+++.++. .+ +..+++. ..+...+.++
T Consensus 130 -~gp~~a~~~l~~~G~g~~~ii~~~~~~---~~~a~~~~~~l~~~lG~-~~agv~~~~~~~~~~~~~~~s~ 195 (338)
T 1np3_A 130 -KAPGHTVRSEFVKGGGIPDLIAIYQDA---SGNAKNVALSYACGVGG-GRTGIIETTFKDETETDLFGEQ 195 (338)
T ss_dssp -SSCSHHHHHHHHTTCCCCEEEEEEECS---SSCHHHHHHHHHHHTTH-HHHCEEECCHHHHHHHHHHHHH
T ss_pred -CCCchhHHHHHhccCCCeEEEEecCCC---CHHHHHHHHHHHHHcCC-CccceEeechhcccchHHHHHH
Confidence 45555443322 22233 222221 35678889999998861 13 5666653 4455566555
No 85
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=99.39 E-value=3.5e-12 Score=112.70 Aligned_cols=169 Identities=17% Similarity=0.090 Sum_probs=102.9
Q ss_pred CceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCc
Q 017997 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (362)
+|||+|||+|.||..+|..|++. |++|+++|+++++.+.+.+. ++..+ +..++++++|
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~--g~~V~~~~r~~~~~~~~~~~-------------------g~~~~-~~~~~~~~~D 85 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGS--GFKVVVGSRNPKRTARLFPS-------------------AAQVT-FQEEAVSSPE 85 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHT--TCCEEEEESSHHHHHHHSBT-------------------TSEEE-EHHHHTTSCS
T ss_pred CCEEEEEccCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHc-------------------CCcee-cHHHHHhCCC
Confidence 47999999999999999999998 89999999999998887542 13333 5667789999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCc-cccHH---HHHHHHHhccCCCceEEeeCC
Q 017997 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVP-VKTAE---AIEKILTHNSKGIKFQILSNP 156 (362)
Q Consensus 81 vVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~-~gt~~---~l~~~l~~~~~g~~~~v~~~P 156 (362)
+||+|+|.. .. .++++ +.+.+ ++++|++.|+.. ..+.+ ...+.+.+..++..+.-..++
T Consensus 86 vVi~av~~~-~~--------------~~v~~-l~~~~-~~~~vv~~s~g~~~~~l~~~~~~~~~l~~~l~~~~vv~~~n~ 148 (215)
T 2vns_A 86 VIFVAVFRE-HY--------------SSLCS-LSDQL-AGKILVDVSNPTEQEHLQHRESNAEYLASLFPTCTVVKAFNV 148 (215)
T ss_dssp EEEECSCGG-GS--------------GGGGG-GHHHH-TTCEEEECCCCCHHHHHHCSSCHHHHHHHHCTTSEEEEECTT
T ss_pred EEEECCChH-HH--------------HHHHH-HHHhc-CCCEEEEeCCCcccccccccccHHHHHHHHCCCCeEEecccc
Confidence 999999842 11 22222 44455 678888766643 22211 112223332211111111222
Q ss_pred cc---cccCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCcEEeCChhHHHHHHH
Q 017997 157 EF---LAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKL 217 (362)
Q Consensus 157 e~---~~~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ae~~Kl 217 (362)
.. ..++.. . .....++.| . +++..+.++++|+.++. ..++.++++.+.+.+-
T Consensus 149 ~~~~~~~~~~~-~--g~~~~~~~g-~----~~~~~~~v~~ll~~~G~-~~~~~g~~~~~~~~e~ 203 (215)
T 2vns_A 149 ISAWTLQAGPR-D--GNRQVPICG-D----QPEAKRAVSEMALAMGF-MPVDMGSLASAWEVEA 203 (215)
T ss_dssp BCHHHHHTCSC-S--SCCEEEEEE-S----CHHHHHHHHHHHHHTTC-EEEECCSGGGHHHHHH
T ss_pred ccHhHhccccc-C--CceeEEEec-C----CHHHHHHHHHHHHHcCC-ceEeecchhhhhHhhh
Confidence 11 112211 1 111234444 3 27889999999999873 4556678888777663
No 86
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=99.37 E-value=2.1e-12 Score=120.38 Aligned_cols=199 Identities=15% Similarity=0.095 Sum_probs=117.8
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcE
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (362)
|||+|||+|.||+.+|..|+ + |++|++|++++++++.+++.+..+..++.. . ...+..+ .++...+|+
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~--g~~V~~~~r~~~~~~~l~~~G~~~~~~~~~-~-----~~~~~~~---~~~~~~~D~ 70 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-L--YHDVTVVTRRQEQAAAIQSEGIRLYKGGEE-F-----RADCSAD---TSINSDFDL 70 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-T--TSEEEEECSCHHHHHHHHHHCEEEEETTEE-E-----EECCEEE---SSCCSCCSE
T ss_pred CEEEEECCCHHHHHHHHHHh-c--CCceEEEECCHHHHHHHHhCCceEecCCCe-e-----ccccccc---ccccCCCCE
Confidence 89999999999999999999 8 999999999999999887643322211110 0 0011111 124678999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhccCCCce--EEee-CCcc
Q 017997 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKF--QILS-NPEF 158 (362)
Q Consensus 82 Vii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~~~g~~~--~v~~-~Pe~ 158 (362)
||+|||.. .+.++++.+.+. .+++ |+. -....+..+.+ ++..+...+ .+.+ +-.+
T Consensus 71 vilavK~~---------------~~~~~l~~l~~~-~~~~-ivs-~~nGi~~~e~l----~~~~~~~~vl~g~~~~~a~~ 128 (307)
T 3ego_A 71 LVVTVKQH---------------QLQSVFSSLERI-GKTN-ILF-LQNGMGHIHDL----KDWHVGHSIYVGIVEHGAVR 128 (307)
T ss_dssp EEECCCGG---------------GHHHHHHHTTSS-CCCE-EEE-CCSSSHHHHHH----HTCCCSCEEEEEEECCEEEE
T ss_pred EEEEeCHH---------------HHHHHHHHhhcC-CCCe-EEE-ecCCccHHHHH----HHhCCCCcEEEEEEeeceEE
Confidence 99999842 256777777664 4555 432 22222322333 332211111 1222 2234
Q ss_pred cccCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCcE-EeCChhHHHHHHHHHhHH---------------
Q 017997 159 LAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRI-LTTNLWSAELSKLAANAF--------------- 222 (362)
Q Consensus 159 ~~~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~ae~~Kl~~N~~--------------- 222 (362)
..||...+.- ..++.+|..+.. .+..+.+.++|...+ .++ ...|+....|.|++-|+.
T Consensus 129 ~~pg~v~~~~--~g~~~iG~~~~~--~~~~~~l~~~l~~ag--~~~~~~~di~~~~W~Kl~~N~~~N~ltal~~~~~g~l 202 (307)
T 3ego_A 129 KSDTAVDHTG--LGAIKWSAFDDA--EPDRLNILFQHNHSD--FPIYYETDWYRLLTGKLIVNACINPLTALLQVKNGEL 202 (307)
T ss_dssp CSSSEEEEEE--CCCEEEEECTTC--CGGGGTTTTSSCCTT--SCEEECSCHHHHHHHHHHHHHHHHHHHHHHTCCTTHH
T ss_pred CCCCEEEEee--eeeEEEEeCCCC--cHHHHHHHHHhhhCC--CCcEechhHHHHHHHHHHHhhhhhHHHHHhcCCcchh
Confidence 5566654332 235678876432 122333444444322 234 457999999999998872
Q ss_pred ------HHHHHHHHHHHHHHHHHh
Q 017997 223 ------LAQRISSVNAMSALCEAT 240 (362)
Q Consensus 223 ------~~~~ia~~nE~~~l~~~~ 240 (362)
+.+..+.+.|+..+++..
T Consensus 203 ~~~~~~~~l~~~l~~E~~~va~~~ 226 (307)
T 3ego_A 203 LTTPAYLAFMKLVFQEACRILKLE 226 (307)
T ss_dssp HHSHHHHHHHHHHHHHHHHHHTCS
T ss_pred hcChhHHHHHHHHHHHHHHHHhcc
Confidence 345567888888887654
No 87
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=99.36 E-value=1.2e-12 Score=120.24 Aligned_cols=183 Identities=13% Similarity=0.108 Sum_probs=106.2
Q ss_pred CceEEEEcCChhHHHHHHHHHHcCCCCeE-EEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCC
Q 017997 1 MVKICCIGAGYVGGPTMAVIALKCPSIEV-AVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEA 79 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~la~~~~G~~V-~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~a 79 (362)
||||+|||+|.||.++|..|+++ ++| .+||+++++.+.+.+. .+. .+++++++++++
T Consensus 2 ~m~I~iIG~G~mG~~la~~l~~~---~~v~~v~~~~~~~~~~~~~~-----------------~g~--~~~~~~~~~~~~ 59 (276)
T 2i76_A 2 SLVLNFVGTGTLTRFFLECLKDR---YEIGYILSRSIDRARNLAEV-----------------YGG--KAATLEKHPELN 59 (276)
T ss_dssp --CCEEESCCHHHHHHHHTTC-------CCCEECSSHHHHHHHHHH-----------------TCC--CCCSSCCCCC--
T ss_pred CceEEEEeCCHHHHHHHHHHHHc---CcEEEEEeCCHHHHHHHHHH-----------------cCC--ccCCHHHHHhcC
Confidence 47999999999999999999864 788 5999999998887641 011 445666667899
Q ss_pred cEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhccCCCceEEeeCCccc
Q 017997 80 DIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEFL 159 (362)
Q Consensus 80 DvVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~~ 159 (362)
|+||+|||... +.++++++. .++++|+..|+..+... +++. +....+|...
T Consensus 60 DvVilav~~~~---------------~~~v~~~l~---~~~~ivi~~s~~~~~~~------l~~~-----~~~~~~p~~~ 110 (276)
T 2i76_A 60 GVVFVIVPDRY---------------IKTVANHLN---LGDAVLVHCSGFLSSEI------FKKS-----GRASIHPNFS 110 (276)
T ss_dssp -CEEECSCTTT---------------HHHHHTTTC---CSSCCEEECCSSSCGGG------GCSS-----SEEEEEECSC
T ss_pred CEEEEeCChHH---------------HHHHHHHhc---cCCCEEEECCCCCcHHH------HHHh-----hccccchhhh
Confidence 99999998531 345555543 57788887775433221 1111 1222334332
Q ss_pred ccCc--cccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCcEEeCChh---HHHHHHHHHhHHHHHHHHHHHHHH
Q 017997 160 AEGT--AIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLW---SAELSKLAANAFLAQRISSVNAMS 234 (362)
Q Consensus 160 ~~g~--a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~---~ae~~Kl~~N~~~~~~ia~~nE~~ 234 (362)
.+|. ....+...+ +++++. ++..+.++++++.++. .++.+.... .....+++.|... .+++|+.
T Consensus 111 ~~g~~~~~~~~~~~~-~~~~~~-----~~~~~~~~~l~~~lG~-~~~~v~~~~~~~~~~~~~l~~n~~~----~~~~~a~ 179 (276)
T 2i76_A 111 FSSLEKALEMKDQIV-FGLEGD-----ERGLPIVKKIAEEISG-KYFVIPSEKKKAYHLAAVIASNFPV----ALAYLSK 179 (276)
T ss_dssp C--CTTGGGCGGGCC-EEECCC-----TTTHHHHHHHHHHHCS-CEEECCGGGHHHHHHHHHHHHTTHH----HHHHHHH
T ss_pred cCCCchhHHHhCCCe-EEEEeC-----hHHHHHHHHHHHHhCC-CEEEECHHHHHHHHHHHHHHHHHHH----HHHHHHH
Confidence 2221 111122222 344544 3458889999999862 345444322 2234477777432 4567777
Q ss_pred HHHHHhCCCHH
Q 017997 235 ALCEATGANVS 245 (362)
Q Consensus 235 ~l~~~~g~d~~ 245 (362)
.++++.|++.+
T Consensus 180 ~~~~~~Gl~~~ 190 (276)
T 2i76_A 180 RIYTLLGLDEP 190 (276)
T ss_dssp HHHHTTTCSCH
T ss_pred HHHHHcCCChH
Confidence 88999999877
No 88
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=99.34 E-value=6.4e-12 Score=118.20 Aligned_cols=135 Identities=13% Similarity=0.152 Sum_probs=96.5
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcE
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (362)
|+|+|||+|.||..+|..|+.. |++|++||+++++.+.+.+. .+..+ +++++++++|+
T Consensus 156 ~~vgIIG~G~iG~~iA~~l~~~--G~~V~~~d~~~~~~~~~~~~-------------------g~~~~-~l~e~l~~aDv 213 (330)
T 2gcg_A 156 STVGIIGLGRIGQAIARRLKPF--GVQRFLYTGRQPRPEEAAEF-------------------QAEFV-STPELAAQSDF 213 (330)
T ss_dssp CEEEEECCSHHHHHHHHHHGGG--TCCEEEEESSSCCHHHHHTT-------------------TCEEC-CHHHHHHHCSE
T ss_pred CEEEEECcCHHHHHHHHHHHHC--CCEEEEECCCCcchhHHHhc-------------------CceeC-CHHHHHhhCCE
Confidence 6899999999999999999988 99999999987655544321 23444 77788899999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhccC---CCceEEeeCCcc
Q 017997 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSK---GIKFQILSNPEF 158 (362)
Q Consensus 82 Vii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~~~---g~~~~v~~~Pe~ 158 (362)
|++|+|.+.... .+.. +.+.+.++++.++++.|+.++...+.+.+.+++... +.|+ +.||.
T Consensus 214 Vi~~vp~~~~t~-----------~~i~--~~~~~~mk~gailIn~srg~~v~~~aL~~aL~~~~i~ga~lDv---~~~ep 277 (330)
T 2gcg_A 214 IVVACSLTPATE-----------GLCN--KDFFQKMKETAVFINISRGDVVNQDDLYQALASGKIAAAGLDV---TSPEP 277 (330)
T ss_dssp EEECCCCCTTTT-----------TCBS--HHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESC---CSSSS
T ss_pred EEEeCCCChHHH-----------HhhC--HHHHhcCCCCcEEEECCCCcccCHHHHHHHHHcCCccEEEeCC---CCCCC
Confidence 999998653221 1111 345567889999999999988888888887876321 2332 57777
Q ss_pred cccCccccccCCCCeEEEe
Q 017997 159 LAEGTAIQDLFNPDRVLIG 177 (362)
Q Consensus 159 ~~~g~a~~~~~~~~~viiG 177 (362)
..+++.+ +..+.+++.
T Consensus 278 l~~~~~l---~~~~nvi~t 293 (330)
T 2gcg_A 278 LPTNHPL---LTLKNCVIL 293 (330)
T ss_dssp CCTTCGG---GGCTTEEEC
T ss_pred CCCCChh---hcCCCEEEC
Confidence 6665544 444556653
No 89
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=99.29 E-value=9.7e-11 Score=103.89 Aligned_cols=155 Identities=9% Similarity=0.037 Sum_probs=101.8
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcE
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (362)
|||+|||+|.||+++|..|.++ ||+|++||+. ++ +++||
T Consensus 7 mkI~IIG~G~~G~sLA~~L~~~--G~~V~~~~~~-------------------------------------~~-~~~aD- 45 (232)
T 3dfu_A 7 LRVGIFDDGSSTVNMAEKLDSV--GHYVTVLHAP-------------------------------------ED-IRDFE- 45 (232)
T ss_dssp CEEEEECCSCCCSCHHHHHHHT--TCEEEECSSG-------------------------------------GG-GGGCS-
T ss_pred cEEEEEeeCHHHHHHHHHHHHC--CCEEEEecCH-------------------------------------HH-hccCC-
Confidence 8999999999999999999999 9999999972 11 46788
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeC-CccccHHHHHHHHHhccCCCceEEeeCCcccc
Q 017997 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKST-VPVKTAEAIEKILTHNSKGIKFQILSNPEFLA 160 (362)
Q Consensus 82 Vii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~ST-v~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~~~ 160 (362)
|+|||.. .+.++++++.++++++++|+.+|. ++....+.+ ... |. .++..+|-+..
T Consensus 46 -ilavP~~---------------ai~~vl~~l~~~l~~g~ivvd~sgs~~~~vl~~~----~~~--g~-~fvg~HPm~g~ 102 (232)
T 3dfu_A 46 -LVVIDAH---------------GVEGYVEKLSAFARRGQMFLHTSLTHGITVMDPL----ETS--GG-IVMSAHPIGQD 102 (232)
T ss_dssp -EEEECSS---------------CHHHHHHHHHTTCCTTCEEEECCSSCCGGGGHHH----HHT--TC-EEEEEEEEETT
T ss_pred -EEEEcHH---------------HHHHHHHHHHHhcCCCCEEEEECCcCHHHHHHHH----HhC--CC-cEEEeeeCCCC
Confidence 9998843 257788899999999999998664 333322322 222 22 35667885321
Q ss_pred cCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCcEEeCChhHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Q 017997 161 EGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLAANAFLAQRISSVNAMSALCEA 239 (362)
Q Consensus 161 ~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ae~~Kl~~N~~~~~~ia~~nE~~~l~~~ 239 (362)
+.++.+++ ++..+.++++++.++ ..+..++....... ++.-......++++++...+.+.
T Consensus 103 -----------~~~i~a~d-----~~a~~~l~~L~~~lG--~~vv~~~~~~hd~~-~AAvsh~nhLv~L~~~A~~ll~~ 162 (232)
T 3dfu_A 103 -----------RWVASALD-----ELGETIVGLLVGELG--GSIVEIADDKRAQL-AAALTYAGFLSTLQRDASYFLDE 162 (232)
T ss_dssp -----------EEEEEESS-----HHHHHHHHHHHHHTT--CEECCCCGGGHHHH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -----------ceeeeCCC-----HHHHHHHHHHHHHhC--CEEEEeCHHHHhHH-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 13444432 778999999999986 35555554332222 11111233345666666666644
No 90
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=99.29 E-value=9.1e-12 Score=117.32 Aligned_cols=133 Identities=19% Similarity=0.174 Sum_probs=94.1
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcE
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (362)
|+|+|||+|.||..+|..|+.. |++|++||+++++ +...+. .+.+ +++++++++||+
T Consensus 151 ~~vgIIG~G~iG~~iA~~l~~~--G~~V~~~d~~~~~-~~~~~~-------------------g~~~-~~l~~~l~~aDv 207 (334)
T 2dbq_A 151 KTIGIIGLGRIGQAIAKRAKGF--NMRILYYSRTRKE-EVEREL-------------------NAEF-KPLEDLLRESDF 207 (334)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCH-HHHHHH-------------------CCEE-CCHHHHHHHCSE
T ss_pred CEEEEEccCHHHHHHHHHHHhC--CCEEEEECCCcch-hhHhhc-------------------Cccc-CCHHHHHhhCCE
Confidence 6899999999999999999988 9999999998766 433210 1233 477788899999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhccC-C--CceEEeeCCcc
Q 017997 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSK-G--IKFQILSNPEF 158 (362)
Q Consensus 82 Vii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~~~-g--~~~~v~~~Pe~ 158 (362)
|++|+|.+.... .+.. +.+.+.+++++++++.|+.++...+.+.+.+++... | .|+ +.||.
T Consensus 208 Vil~vp~~~~t~-----------~~i~--~~~~~~mk~~ailIn~srg~~v~~~aL~~aL~~~~i~ga~lDv---~~~EP 271 (334)
T 2dbq_A 208 VVLAVPLTRETY-----------HLIN--EERLKLMKKTAILINIARGKVVDTNALVKALKEGWIAGAGLDV---FEEEP 271 (334)
T ss_dssp EEECCCCCTTTT-----------TCBC--HHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESC---CSSSS
T ss_pred EEECCCCChHHH-----------HhhC--HHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhCCeeEEEecC---CCCCC
Confidence 999998654221 1111 345667899999999999888888888887876321 2 332 56664
Q ss_pred cccCccccccCCCCeEEEe
Q 017997 159 LAEGTAIQDLFNPDRVLIG 177 (362)
Q Consensus 159 ~~~g~a~~~~~~~~~viiG 177 (362)
.+.+.++..+++++.
T Consensus 272 ----~~~~~L~~~~~vi~t 286 (334)
T 2dbq_A 272 ----YYNEELFKLDNVVLT 286 (334)
T ss_dssp ----CCCHHHHHCTTEEEC
T ss_pred ----CCCchhhcCCCEEEC
Confidence 223445666677763
No 91
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=98.90 E-value=5.8e-13 Score=116.47 Aligned_cols=166 Identities=15% Similarity=0.159 Sum_probs=100.1
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcE
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (362)
|||+|||+|.||..+|..|.+. |++|++||++++ .+.+.. ..+..+ +..++++++|+
T Consensus 20 ~~I~iIG~G~mG~~la~~L~~~--G~~V~~~~r~~~-~~~~~~-------------------~g~~~~-~~~~~~~~aDv 76 (201)
T 2yjz_A 20 GVVCIFGTGDFGKSLGLKMLQC--GYSVVFGSRNPQ-VSSLLP-------------------RGAEVL-CYSEAASRSDV 76 (201)
Confidence 7899999999999999999998 899999999876 433321 012333 55666889999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCcc------ccHHHHHHHHHhccCCCceEEeeC
Q 017997 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPV------KTAEAIEKILTHNSKGIKFQILSN 155 (362)
Q Consensus 82 Vii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~------gt~~~l~~~l~~~~~g~~~~v~~~ 155 (362)
||+|||.+. +.+++ ++.+ +.++++||+.++..+ +..+.+.+.+..... .. .+...
T Consensus 77 Vilav~~~~---------------~~~v~-~l~~-~~~~~ivI~~~~G~~~~~~~~~~~~~l~~~~~~~~v-vr-a~~n~ 137 (201)
T 2yjz_A 77 IVLAVHREH---------------YDFLA-ELAD-SLKGRVLIDVSNNQKMNQYPESNAEYLAQLVPGAHV-VK-AFNTI 137 (201)
Confidence 999998531 12333 3433 346778887776433 222333333322100 00 01111
Q ss_pred Cc-ccccCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCcEEeCChhHHHHHHHH
Q 017997 156 PE-FLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLA 218 (362)
Q Consensus 156 Pe-~~~~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ae~~Kl~ 218 (362)
|. ...+|.. . .+...++.|++ ++..+.++++|+.++. ..++.++++.+.+.|.+
T Consensus 138 ~a~~~~~g~l-~--g~~~~~~~g~~-----~~~~~~v~~ll~~~G~-~~~~~G~l~~a~~~e~~ 192 (201)
T 2yjz_A 138 SAWALQSGTL-D--ASRQVFVCGND-----SKAKDRVMDIARTLGL-TPLDQGSLVAAKEIENY 192 (201)
Confidence 21 1222321 0 11112455543 5778899999999873 45667788888888754
No 92
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=99.24 E-value=2.5e-11 Score=113.17 Aligned_cols=121 Identities=22% Similarity=0.240 Sum_probs=85.7
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHh-hhcCCCEEEecCHHhhhcCCc
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVK-QCRGKNLFFSTDVEKHVSEAD 80 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~-~~~~~~l~~t~d~~~a~~~aD 80 (362)
|||+|||+|+||.++|..|+.++.|++|++||+++++++.+... +.+... .....++++++|+++ +++||
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~--------l~~~~~~~~~~~~i~~t~d~~~-l~~aD 71 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALD--------MYESGPVGLFDTKVTGSNDYAD-TANSD 71 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHH--------HHTTHHHHTCCCEEEEESCGGG-GTTCS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHh--------HHhhhhcccCCcEEEECCCHHH-HCCCC
Confidence 79999999999999999999853379999999999888865421 000000 001345788889876 99999
Q ss_pred EEEEeccCCCCCCCCCCCCCCCh-----HHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHH
Q 017997 81 IVFVSVNTPTKTQGLGAGKAADL-----TYWESAARVIADVSKSDKIVVEKSTVPVKTAEAI 137 (362)
Q Consensus 81 vVii~vptp~~~~g~~~~~~~d~-----~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l 137 (362)
+||+|+|+|....+ ...|+ +.++++.+.+.++. ++.+|++- |.|+++...+
T Consensus 72 vViiav~~p~~~g~----~r~dl~~~n~~i~~~i~~~i~~~~-~~~~viv~-tNP~~~~~~~ 127 (310)
T 1guz_A 72 IVIITAGLPRKPGM----TREDLLMKNAGIVKEVTDNIMKHS-KNPIIIVV-SNPLDIMTHV 127 (310)
T ss_dssp EEEECCSCCCCTTC----CHHHHHHHHHHHHHHHHHHHHHHC-SSCEEEEC-CSSHHHHHHH
T ss_pred EEEEeCCCCCCCCC----CHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEEE-cCchHHHHHH
Confidence 99999998865421 13344 56678888888885 55555443 7788876444
No 93
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=99.24 E-value=1.7e-11 Score=115.97 Aligned_cols=109 Identities=15% Similarity=0.093 Sum_probs=81.9
Q ss_pred ceEEEEcCChhHHHHHHHHH-HcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCc
Q 017997 2 VKICCIGAGYVGGPTMAVIA-LKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la-~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (362)
++|+|||+|.||..+|..+. .. |++|++||+++++.+...+. .+..++++++++++||
T Consensus 164 ~~vgIIG~G~IG~~vA~~l~~~~--G~~V~~~d~~~~~~~~~~~~-------------------g~~~~~~l~ell~~aD 222 (348)
T 2w2k_A 164 HVLGAVGLGAIQKEIARKAVHGL--GMKLVYYDVAPADAETEKAL-------------------GAERVDSLEELARRSD 222 (348)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--CCEEEEECSSCCCHHHHHHH-------------------TCEECSSHHHHHHHCS
T ss_pred CEEEEEEECHHHHHHHHHHHHhc--CCEEEEECCCCcchhhHhhc-------------------CcEEeCCHHHHhccCC
Confidence 58999999999999999998 77 99999999987655443220 1344557888889999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhc
Q 017997 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHN 144 (362)
Q Consensus 81 vVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~ 144 (362)
+|++|+|..... ..+.. +.+.+.++++.++++.|+.++...+.+.+.+++.
T Consensus 223 vVil~vp~~~~t-----------~~li~--~~~l~~mk~gailin~srg~~vd~~aL~~aL~~~ 273 (348)
T 2w2k_A 223 CVSVSVPYMKLT-----------HHLID--EAFFAAMKPGSRIVNTARGPVISQDALIAALKSG 273 (348)
T ss_dssp EEEECCCCSGGG-----------TTCBC--HHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTT
T ss_pred EEEEeCCCChHH-----------HHHhh--HHHHhcCCCCCEEEECCCCchhCHHHHHHHHHhC
Confidence 999999864321 11111 2445678999999999999888888888888763
No 94
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=99.19 E-value=1.9e-10 Score=108.07 Aligned_cols=123 Identities=19% Similarity=0.238 Sum_probs=86.8
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCC-eEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhh-hcCCCEEEecCHHhhhcCC
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQ-CRGKNLFFSTDVEKHVSEA 79 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~-~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~-~~~~~l~~t~d~~~a~~~a 79 (362)
|||+|||+|+||.++|..|+.+ |+ +|++||+++++++..... +.+.... ....++++|+|+++++++|
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~--g~~~V~L~D~~~~~~~~~~~~--------l~~~~~~~~~~~~i~~t~d~~ea~~~a 79 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALR--ELADVVLYDVVKGMPEGKALD--------LSHVTSVVDTNVSVRAEYSYEAALTGA 79 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCCEEEEECSSSSHHHHHHHH--------HHHHHHHTTCCCCEEEECSHHHHHTTC
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCeEEEEECChhHHHHHHHH--------HHhhhhccCCCCEEEEeCCHHHHhCCC
Confidence 6999999999999999999998 88 999999999888763211 1111111 1235688899998789999
Q ss_pred cEEEEeccCCCCCCCCCCC--CCCC-----hHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHH
Q 017997 80 DIVFVSVNTPTKTQGLGAG--KAAD-----LTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAI 137 (362)
Q Consensus 80 DvVii~vptp~~~~g~~~~--~~~d-----~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l 137 (362)
|+||+++++|... |.... ...| ...+++.++.|.++. ++.++++ .|.|.++.-.+
T Consensus 80 DiVi~a~g~p~~~-g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~vi~-~tNP~~~~t~~ 141 (331)
T 1pzg_A 80 DCVIVTAGLTKVP-GKPDSEWSRNDLLPFNSKIIREIGQNIKKYC-PKTFIIV-VTNPLDCMVKV 141 (331)
T ss_dssp SEEEECCSCSSCT-TCCGGGCCGGGGHHHHHHHHHHHHHHHHHHC-TTCEEEE-CCSSHHHHHHH
T ss_pred CEEEEccCCCCCC-CcccCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEE-EcCchHHHHHH
Confidence 9999999777543 10000 1233 244678888888886 6666654 57888876444
No 95
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=99.15 E-value=3.4e-10 Score=105.89 Aligned_cols=123 Identities=19% Similarity=0.215 Sum_probs=84.9
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCC-eEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhh-hcCCCEEEecCHHhhhcCC
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQ-CRGKNLFFSTDVEKHVSEA 79 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~-~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~-~~~~~l~~t~d~~~a~~~a 79 (362)
|||+|||+|+||.++|..|+.. |+ +|+++|+++++++..... +.+.... ....++++++|+ +++++|
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~--g~~~v~L~Di~~~~l~~~~~~--------l~~~~~~~~~~~~i~~t~d~-~al~~a 73 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQK--NLGDVVLFDIVKNMPHGKALD--------TSHTNVMAYSNCKVSGSNTY-DDLAGA 73 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCCEEEEECSSSSHHHHHHHH--------HHTHHHHHTCCCCEEEECCG-GGGTTC
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCeEEEEeCCHHHHHHHHHH--------HHhhhhhcCCCcEEEECCCH-HHhCCC
Confidence 7999999999999999999998 88 999999999887754321 1111111 123568888898 679999
Q ss_pred cEEEEeccCCCCCCCCC-CCCCCCh-----HHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHH
Q 017997 80 DIVFVSVNTPTKTQGLG-AGKAADL-----TYWESAARVIADVSKSDKIVVEKSTVPVKTAEAI 137 (362)
Q Consensus 80 DvVii~vptp~~~~g~~-~~~~~d~-----~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l 137 (362)
|+||+++++|......+ +....|+ ..++++++.|.++. ++.++++- |.|.++.-.+
T Consensus 74 D~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~-tNP~~~~t~~ 135 (322)
T 1t2d_A 74 DVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNC-PNAFIIVV-TNPVDVMVQL 135 (322)
T ss_dssp SEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEEC-SSSHHHHHHH
T ss_pred CEEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEe-cCChHHHHHH
Confidence 99999998776431100 0001222 45678888888887 67766553 6777765443
No 96
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=99.15 E-value=1.2e-10 Score=109.48 Aligned_cols=104 Identities=15% Similarity=0.158 Sum_probs=78.6
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcE
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (362)
++|+|||+|.||..+|..+... |++|++||++++..+ + ....+++++++++||+
T Consensus 165 ~~vgIIG~G~iG~~vA~~l~~~--G~~V~~~dr~~~~~~-----------------------g-~~~~~~l~ell~~aDv 218 (333)
T 3ba1_A 165 KRVGIIGLGRIGLAVAERAEAF--DCPISYFSRSKKPNT-----------------------N-YTYYGSVVELASNSDI 218 (333)
T ss_dssp CCEEEECCSHHHHHHHHHHHTT--TCCEEEECSSCCTTC-----------------------C-SEEESCHHHHHHTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCEEEEECCCchhcc-----------------------C-ceecCCHHHHHhcCCE
Confidence 5899999999999999999987 999999999754311 1 2345678888999999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhc
Q 017997 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHN 144 (362)
Q Consensus 82 Vii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~ 144 (362)
|++++|..... ..+.. ++..+.+++++++|+.|+..+-.++.+.+.+++.
T Consensus 219 Vil~vP~~~~t-----------~~li~--~~~l~~mk~gailIn~srG~~vd~~aL~~aL~~g 268 (333)
T 3ba1_A 219 LVVACPLTPET-----------THIIN--REVIDALGPKGVLINIGRGPHVDEPELVSALVEG 268 (333)
T ss_dssp EEECSCCCGGG-----------TTCBC--HHHHHHHCTTCEEEECSCGGGBCHHHHHHHHHHT
T ss_pred EEEecCCChHH-----------HHHhh--HHHHhcCCCCCEEEECCCCchhCHHHHHHHHHcC
Confidence 99999853221 11110 2344567899999999998888888888878764
No 97
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=99.13 E-value=5.8e-10 Score=104.66 Aligned_cols=117 Identities=21% Similarity=0.303 Sum_probs=83.5
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCC-eEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhh-hcCCCEEEecCHHhhhcCC
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQ-CRGKNLFFSTDVEKHVSEA 79 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~-~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~-~~~~~l~~t~d~~~a~~~a 79 (362)
|||+|||+|+||.++|..|+.+ |+ +|++||+++++++..... +.+.... ....++++++|+ +++++|
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~--g~~~V~L~Di~~~~l~~~~~~--------l~~~~~~~~~~~~i~~t~d~-~al~~a 83 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQK--DLGDVYMFDIIEGVPQGKALD--------LNHCMALIGSPAKIFGENNY-EYLQNS 83 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCCEEEEECSSTTHHHHHHHH--------HHHHHHHHTCCCCEEEESCG-GGGTTC
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCeEEEEECCHHHHHHHHHH--------HHhHhhccCCCCEEEECCCH-HHHCCC
Confidence 6899999999999999999998 88 999999999888753211 1111111 124568898998 679999
Q ss_pred cEEEEeccCCCCCCCCCCCCCCCh-----HHHHHHHHHHHhhcCCCCEEEEeeCCccccHH
Q 017997 80 DIVFVSVNTPTKTQGLGAGKAADL-----TYWESAARVIADVSKSDKIVVEKSTVPVKTAE 135 (362)
Q Consensus 80 DvVii~vptp~~~~g~~~~~~~d~-----~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~ 135 (362)
|+||+++++|... | ....|+ ..++++++++.++. ++.++++- |.|.++.-
T Consensus 84 D~VI~avg~p~k~-g---~tr~dl~~~n~~i~~~i~~~i~~~~-p~a~viv~-tNP~~~~t 138 (328)
T 2hjr_A 84 DVVIITAGVPRKP-N---MTRSDLLTVNAKIVGSVAENVGKYC-PNAFVICI-TNPLDAMV 138 (328)
T ss_dssp SEEEECCSCCCCT-T---CCSGGGHHHHHHHHHHHHHHHHHHC-TTCEEEEC-CSSHHHHH
T ss_pred CEEEEcCCCCCCC-C---CchhhHHhhhHHHHHHHHHHHHHHC-CCeEEEEe-cCchHHHH
Confidence 9999999877643 1 112333 45677888888887 66776554 55666543
No 98
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=99.13 E-value=1.1e-10 Score=107.39 Aligned_cols=104 Identities=13% Similarity=0.137 Sum_probs=80.8
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcE
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (362)
++|+|||+|.||.++|..+... |++|++||++++..+ .....+++++++++||+
T Consensus 123 ~tvGIIGlG~IG~~vA~~l~~~--G~~V~~~dr~~~~~~------------------------~~~~~~~l~ell~~aDi 176 (290)
T 3gvx_A 123 KALGILGYGGIGRRVAHLAKAF--GMRVIAYTRSSVDQN------------------------VDVISESPADLFRQSDF 176 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCEEEEECSSCCCTT------------------------CSEECSSHHHHHHHCSE
T ss_pred chheeeccCchhHHHHHHHHhh--CcEEEEEeccccccc------------------------cccccCChHHHhhccCe
Confidence 5899999999999999999988 999999999753211 12345688888999999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhc
Q 017997 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHN 144 (362)
Q Consensus 82 Vii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~ 144 (362)
|++|+|...... .+ .-+...+.++++.++|+.|+.++-..+.+.+.+++.
T Consensus 177 V~l~~P~t~~t~-----------~l--i~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g 226 (290)
T 3gvx_A 177 VLIAIPLTDKTR-----------GM--VNSRLLANARKNLTIVNVARADVVSKPDMIGFLKER 226 (290)
T ss_dssp EEECCCCCTTTT-----------TC--BSHHHHTTCCTTCEEEECSCGGGBCHHHHHHHHHHC
T ss_pred EEEEeeccccch-----------hh--hhHHHHhhhhcCceEEEeehhcccCCcchhhhhhhc
Confidence 999998432211 11 114566788999999999998888888888888764
No 99
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=99.12 E-value=3e-10 Score=106.83 Aligned_cols=132 Identities=12% Similarity=0.158 Sum_probs=90.0
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcE
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (362)
++|+|||+|.||..+|..+... |++|++||++++. +...+ ..+..+ ++++++++||+
T Consensus 147 ~~vgIIG~G~iG~~vA~~l~~~--G~~V~~~d~~~~~-~~~~~-------------------~g~~~~-~l~e~l~~aDi 203 (333)
T 2d0i_A 147 KKVGILGMGAIGKAIARRLIPF--GVKLYYWSRHRKV-NVEKE-------------------LKARYM-DIDELLEKSDI 203 (333)
T ss_dssp CEEEEECCSHHHHHHHHHHGGG--TCEEEEECSSCCH-HHHHH-------------------HTEEEC-CHHHHHHHCSE
T ss_pred CEEEEEccCHHHHHHHHHHHHC--CCEEEEECCCcch-hhhhh-------------------cCceec-CHHHHHhhCCE
Confidence 5899999999999999999988 9999999998765 32221 013443 77788899999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhcc-C--CCceEEeeCCcc
Q 017997 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNS-K--GIKFQILSNPEF 158 (362)
Q Consensus 82 Vii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~~-~--g~~~~v~~~Pe~ 158 (362)
|++|+|..... ..+.. +.+.+.++++ ++++.|+.++-..+.+.+.+++.. . |.|+ +.||.
T Consensus 204 Vil~vp~~~~t-----------~~~i~--~~~~~~mk~g-ilin~srg~~vd~~aL~~aL~~~~i~gaglDv---~~~EP 266 (333)
T 2d0i_A 204 VILALPLTRDT-----------YHIIN--EERVKKLEGK-YLVNIGRGALVDEKAVTEAIKQGKLKGYATDV---FEKEP 266 (333)
T ss_dssp EEECCCCCTTT-----------TTSBC--HHHHHHTBTC-EEEECSCGGGBCHHHHHHHHHTTCBCEEEESC---CSSSS
T ss_pred EEEcCCCChHH-----------HHHhC--HHHHhhCCCC-EEEECCCCcccCHHHHHHHHHcCCceEEEecC---CCCCC
Confidence 99999865221 11111 2344567889 999999888777777877776632 1 2332 56554
Q ss_pred cccCccccccCCCC-eEEEe
Q 017997 159 LAEGTAIQDLFNPD-RVLIG 177 (362)
Q Consensus 159 ~~~g~a~~~~~~~~-~viiG 177 (362)
.. . +.++..+ .+++.
T Consensus 267 ~~-~---~~L~~~~~nvilt 282 (333)
T 2d0i_A 267 VR-E---HELFKYEWETVLT 282 (333)
T ss_dssp CS-C---CGGGGCTTTEEEC
T ss_pred CC-C---chHHcCCCCEEEc
Confidence 32 2 2455556 67654
No 100
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=99.11 E-value=5.7e-10 Score=103.90 Aligned_cols=120 Identities=16% Similarity=0.166 Sum_probs=80.4
Q ss_pred CceEEEEcCChhHHHHHHHHHHcCCC--CeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEE-ecCHHhhhc
Q 017997 1 MVKICCIGAGYVGGPTMAVIALKCPS--IEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFF-STDVEKHVS 77 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~la~~~~G--~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~-t~d~~~a~~ 77 (362)
||||+|||+|.||.++|..|+++ | ++|++||+++++++.+.... ..... ......+. ++|+ ++++
T Consensus 1 m~kI~VIGaG~~G~~la~~L~~~--g~~~~V~l~d~~~~~~~~~~~~l--------~~~~~-~~~~~~~~~~~d~-~~~~ 68 (309)
T 1hyh_A 1 ARKIGIIGLGNVGAAVAHGLIAQ--GVADDYVFIDANEAKVKADQIDF--------QDAMA-NLEAHGNIVINDW-AALA 68 (309)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH--TCCSEEEEECSSHHHHHHHHHHH--------HHHGG-GSSSCCEEEESCG-GGGT
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCCCEEEEEcCCHHHHHHHHHHH--------Hhhhh-hcCCCeEEEeCCH-HHhC
Confidence 78999999999999999999998 7 89999999999888765310 00000 01112333 5677 5699
Q ss_pred CCcEEEEeccCCCC----CCCCCCCC----CCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHH
Q 017997 78 EADIVFVSVNTPTK----TQGLGAGK----AADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAI 137 (362)
Q Consensus 78 ~aDvVii~vptp~~----~~g~~~~~----~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l 137 (362)
+||+||+|+|.|.. . |. ++ ..++..+.++++.+.++. ++.+|++ .|.|.++...+
T Consensus 69 ~aDvViiav~~~~~~~~~~-g~--~r~~l~~~n~~i~~~i~~~i~~~~-~~~~ii~-~tNp~~~~~~~ 131 (309)
T 1hyh_A 69 DADVVISTLGNIKLQQDNP-TG--DRFAELKFTSSMVQSVGTNLKESG-FHGVLVV-ISNPVDVITAL 131 (309)
T ss_dssp TCSEEEECCSCGGGTC----------CTTHHHHHHHHHHHHHHHHHTT-CCSEEEE-CSSSHHHHHHH
T ss_pred CCCEEEEecCCcccCCCCC-CC--CHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEE-EcCcHHHHHHH
Confidence 99999999997642 1 00 00 012234577788888876 5666655 67777764433
No 101
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=99.08 E-value=9.8e-10 Score=103.81 Aligned_cols=108 Identities=13% Similarity=0.093 Sum_probs=81.2
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcE
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (362)
++|+|||+|.||..+|..+... |++|++||+++........ .++..+++++++++||+
T Consensus 161 ~tvGIIGlG~IG~~vA~~l~~~--G~~V~~~d~~~~~~~~~~~--------------------g~~~~~~l~ell~~aDi 218 (352)
T 3gg9_A 161 QTLGIFGYGKIGQLVAGYGRAF--GMNVLVWGRENSKERARAD--------------------GFAVAESKDALFEQSDV 218 (352)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSHHHHHHHHHT--------------------TCEECSSHHHHHHHCSE
T ss_pred CEEEEEeECHHHHHHHHHHHhC--CCEEEEECCCCCHHHHHhc--------------------CceEeCCHHHHHhhCCE
Confidence 5899999999999999999887 9999999998643222222 24556688888999999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhc
Q 017997 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHN 144 (362)
Q Consensus 82 Vii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~ 144 (362)
|++++|..... ..+. -+...+.++++.++|+.|..++-..+.+.+.|++.
T Consensus 219 V~l~~Plt~~t-----------~~li--~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g 268 (352)
T 3gg9_A 219 LSVHLRLNDET-----------RSII--TVADLTRMKPTALFVNTSRAELVEENGMVTALNRG 268 (352)
T ss_dssp EEECCCCSTTT-----------TTCB--CHHHHTTSCTTCEEEECSCGGGBCTTHHHHHHHHT
T ss_pred EEEeccCcHHH-----------HHhh--CHHHHhhCCCCcEEEECCCchhhcHHHHHHHHHhC
Confidence 99999853221 1111 13456778999999999987776777787778764
No 102
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=99.08 E-value=5.6e-10 Score=104.39 Aligned_cols=107 Identities=12% Similarity=0.112 Sum_probs=78.8
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeC-CHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCc
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDI-SVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~-~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (362)
++|+|||+|.||..+|..+... |++|++||+ +++.......+ ....+++++++++||
T Consensus 147 ~~vgIIG~G~IG~~~A~~l~~~--G~~V~~~d~~~~~~~~~~~~g--------------------~~~~~~l~ell~~aD 204 (320)
T 1gdh_A 147 KTLGIYGFGSIGQALAKRAQGF--DMDIDYFDTHRASSSDEASYQ--------------------ATFHDSLDSLLSVSQ 204 (320)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT--TCEEEEECSSCCCHHHHHHHT--------------------CEECSSHHHHHHHCS
T ss_pred CEEEEECcCHHHHHHHHHHHHC--CCEEEEECCCCcChhhhhhcC--------------------cEEcCCHHHHHhhCC
Confidence 5899999999999999999877 999999999 76553221111 344557888889999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHH-HHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhc
Q 017997 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAA-RVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHN 144 (362)
Q Consensus 81 vVii~vptp~~~~g~~~~~~~d~~~l~~~~-~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~ 144 (362)
+|++|+|..... ...+ +...+.++++.++|+.|+..+-..+.+.+.+++.
T Consensus 205 vVil~~p~~~~t--------------~~~i~~~~l~~mk~gailIn~arg~~vd~~aL~~aL~~g 255 (320)
T 1gdh_A 205 FFSLNAPSTPET--------------RYFFNKATIKSLPQGAIVVNTARGDLVDNELVVAALEAG 255 (320)
T ss_dssp EEEECCCCCTTT--------------TTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHT
T ss_pred EEEEeccCchHH--------------HhhcCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhC
Confidence 999999853221 1111 3456778999999998886666667777777664
No 103
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=99.08 E-value=9.8e-10 Score=102.27 Aligned_cols=119 Identities=19% Similarity=0.274 Sum_probs=80.5
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCC-eEEEEeCCHHHHHHHHcCCCCCCCCChHHHHh-hhcCCCEEEecCHHhhhcCC
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISVSRINAWNSDQLPIYEPGLDGVVK-QCRGKNLFFSTDVEKHVSEA 79 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~-~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~-~~~~~~l~~t~d~~~a~~~a 79 (362)
|||+|||+|+||.++|..|+.. |+ +|+++|+++++++.... ++.+... .....++++++|+ +++++|
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~--g~~~v~L~Di~~~~~~g~~~--------dl~~~~~~~~~~~~i~~t~d~-~a~~~a 71 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAK--ELGDIVLLDIVEGVPQGKAL--------DLYEASPIEGFDVRVTGTNNY-ADTANS 71 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCSEEEEECSSSSHHHHHHH--------HHHTTHHHHTCCCCEEEESCG-GGGTTC
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCCeEEEEeCCccHHHHHHH--------hHHHhHhhcCCCeEEEECCCH-HHHCCC
Confidence 6999999999999999999998 76 89999999887764321 1111110 0123468888898 569999
Q ss_pred cEEEEeccCCCCCCCCCCCCCCCh-----HHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHH
Q 017997 80 DIVFVSVNTPTKTQGLGAGKAADL-----TYWESAARVIADVSKSDKIVVEKSTVPVKTAEAI 137 (362)
Q Consensus 80 DvVii~vptp~~~~g~~~~~~~d~-----~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l 137 (362)
|+||+++++|..... ...|+ ..++++.+.+.++. ++.+|++ .|.|.++.-.+
T Consensus 72 D~Vi~a~g~p~~~g~----~r~dl~~~n~~i~~~i~~~i~~~~-p~a~vi~-~tNPv~~~t~~ 128 (309)
T 1ur5_A 72 DVIVVTSGAPRKPGM----SREDLIKVNADITRACISQAAPLS-PNAVIIM-VNNPLDAMTYL 128 (309)
T ss_dssp SEEEECCCC------------CHHHHHHHHHHHHHHHHHGGGC-TTCEEEE-CCSSHHHHHHH
T ss_pred CEEEEcCCCCCCCCC----CHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEE-cCCchHHHHHH
Confidence 999999998864311 11232 44566777777775 6777665 57888876444
No 104
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=99.07 E-value=3.5e-10 Score=106.77 Aligned_cols=109 Identities=14% Similarity=0.194 Sum_probs=81.8
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcE
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (362)
|+|+|||+|.||..+|..+... |++|++||+++...+...+. .....+++++++++||+
T Consensus 165 ktvGIIG~G~IG~~vA~~l~~~--G~~V~~~dr~~~~~~~~~~~-------------------g~~~~~~l~ell~~aDv 223 (351)
T 3jtm_A 165 KTIGTVGAGRIGKLLLQRLKPF--GCNLLYHDRLQMAPELEKET-------------------GAKFVEDLNEMLPKCDV 223 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHGGG--CCEEEEECSSCCCHHHHHHH-------------------CCEECSCHHHHGGGCSE
T ss_pred CEEeEEEeCHHHHHHHHHHHHC--CCEEEEeCCCccCHHHHHhC-------------------CCeEcCCHHHHHhcCCE
Confidence 6899999999999999999987 99999999975444333220 13455688888999999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhc
Q 017997 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHN 144 (362)
Q Consensus 82 Vii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~ 144 (362)
|++++|......+ -. -+...+.++++.++|+.|.-++-..+.+.+.|++.
T Consensus 224 V~l~~Plt~~t~~-----li--------~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g 273 (351)
T 3jtm_A 224 IVINMPLTEKTRG-----MF--------NKELIGKLKKGVLIVNNARGAIMERQAVVDAVESG 273 (351)
T ss_dssp EEECSCCCTTTTT-----CB--------SHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHT
T ss_pred EEECCCCCHHHHH-----hh--------cHHHHhcCCCCCEEEECcCchhhCHHHHHHHHHhC
Confidence 9999984322110 11 13455678999999999998777778888888764
No 105
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=99.05 E-value=5.2e-10 Score=104.26 Aligned_cols=107 Identities=17% Similarity=0.192 Sum_probs=79.0
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcE
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (362)
++|+|||+|.||.++|..+... |++|++||+++++...... + ... .+++++++++|+
T Consensus 143 ~~vgIIG~G~IG~~~A~~l~~~--G~~V~~~d~~~~~~~~~~~-------------------g-~~~-~~l~ell~~aDv 199 (313)
T 2ekl_A 143 KTIGIVGFGRIGTKVGIIANAM--GMKVLAYDILDIREKAEKI-------------------N-AKA-VSLEELLKNSDV 199 (313)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT--TCEEEEECSSCCHHHHHHT-------------------T-CEE-CCHHHHHHHCSE
T ss_pred CEEEEEeeCHHHHHHHHHHHHC--CCEEEEECCCcchhHHHhc-------------------C-cee-cCHHHHHhhCCE
Confidence 6899999999999999999988 9999999998765432111 1 233 367788899999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhc
Q 017997 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHN 144 (362)
Q Consensus 82 Vii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~ 144 (362)
|++|+|......+ -.+ +...+.++++.++|+.|+.++-..+.+.+.+++.
T Consensus 200 Vvl~~P~~~~t~~-----li~--------~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~g 249 (313)
T 2ekl_A 200 ISLHVTVSKDAKP-----IID--------YPQFELMKDNVIIVNTSRAVAVNGKALLDYIKKG 249 (313)
T ss_dssp EEECCCCCTTSCC-----SBC--------HHHHHHSCTTEEEEESSCGGGBCHHHHHHHHHTT
T ss_pred EEEeccCChHHHH-----hhC--------HHHHhcCCCCCEEEECCCCcccCHHHHHHHHHcC
Confidence 9999985432110 111 3445668999999999987766677787777764
No 106
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=99.05 E-value=1.5e-09 Score=102.18 Aligned_cols=107 Identities=8% Similarity=0.093 Sum_probs=79.9
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcE
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (362)
++|+|||+|.||..+|..+... |++|++||+++...+... .....+++++++++||+
T Consensus 174 ktvGIIGlG~IG~~vA~~l~~~--G~~V~~~dr~~~~~~~~~---------------------g~~~~~~l~ell~~sDv 230 (345)
T 4g2n_A 174 RRLGIFGMGRIGRAIATRARGF--GLAIHYHNRTRLSHALEE---------------------GAIYHDTLDSLLGASDI 230 (345)
T ss_dssp CEEEEESCSHHHHHHHHHHHTT--TCEEEEECSSCCCHHHHT---------------------TCEECSSHHHHHHTCSE
T ss_pred CEEEEEEeChhHHHHHHHHHHC--CCEEEEECCCCcchhhhc---------------------CCeEeCCHHHHHhhCCE
Confidence 5899999999999999999877 999999999753332211 13455688888999999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhc
Q 017997 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHN 144 (362)
Q Consensus 82 Vii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~ 144 (362)
|++++|...... .+. -+...+.++++.++|+.|.-++-..+.+.+.|++.
T Consensus 231 V~l~~Plt~~T~-----------~li--~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g 280 (345)
T 4g2n_A 231 FLIAAPGRPELK-----------GFL--DHDRIAKIPEGAVVINISRGDLINDDALIEALRSK 280 (345)
T ss_dssp EEECSCCCGGGT-----------TCB--CHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHT
T ss_pred EEEecCCCHHHH-----------HHh--CHHHHhhCCCCcEEEECCCCchhCHHHHHHHHHhC
Confidence 999998532211 111 13455678999999999987777777887777664
No 107
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=99.05 E-value=1.5e-09 Score=100.77 Aligned_cols=107 Identities=21% Similarity=0.208 Sum_probs=78.3
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcE
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (362)
++|+|||+|.||.++|..+... |++|++||+++++ +...+. + +.. .++++++++||+
T Consensus 143 ~~vgIiG~G~IG~~~A~~l~~~--G~~V~~~d~~~~~-~~~~~~------------------g-~~~-~~l~ell~~aDv 199 (307)
T 1wwk_A 143 KTIGIIGFGRIGYQVAKIANAL--GMNILLYDPYPNE-ERAKEV------------------N-GKF-VDLETLLKESDV 199 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCH-HHHHHT------------------T-CEE-CCHHHHHHHCSE
T ss_pred ceEEEEccCHHHHHHHHHHHHC--CCEEEEECCCCCh-hhHhhc------------------C-ccc-cCHHHHHhhCCE
Confidence 5899999999999999999988 9999999998765 322221 1 233 367788899999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhc
Q 017997 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHN 144 (362)
Q Consensus 82 Vii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~ 144 (362)
|++|+|..... ..+. -+...+.++++.++|+.|+.++-..+.+.+.+++.
T Consensus 200 V~l~~p~~~~t-----------~~li--~~~~l~~mk~ga~lin~arg~~vd~~aL~~aL~~g 249 (307)
T 1wwk_A 200 VTIHVPLVEST-----------YHLI--NEERLKLMKKTAILINTSRGPVVDTNALVKALKEG 249 (307)
T ss_dssp EEECCCCSTTT-----------TTCB--CHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHT
T ss_pred EEEecCCChHH-----------hhhc--CHHHHhcCCCCeEEEECCCCcccCHHHHHHHHHhC
Confidence 99999853321 1111 12445668999999999987666667777777764
No 108
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=99.03 E-value=4.4e-10 Score=105.04 Aligned_cols=135 Identities=16% Similarity=0.226 Sum_probs=90.1
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcE
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (362)
++|+|||+|.||..+|..+... |++|++||++++..+.+ ......+++++++++||+
T Consensus 138 ktvGIiGlG~IG~~vA~~l~~~--G~~V~~~dr~~~~~~~~---------------------~~~~~~~~l~ell~~aDv 194 (324)
T 3evt_A 138 QQLLIYGTGQIGQSLAAKASAL--GMHVIGVNTTGHPADHF---------------------HETVAFTATADALATANF 194 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSCCCCTTC---------------------SEEEEGGGCHHHHHHCSE
T ss_pred CeEEEECcCHHHHHHHHHHHhC--CCEEEEECCCcchhHhH---------------------hhccccCCHHHHHhhCCE
Confidence 5899999999999999999988 99999999975432111 012223567788999999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhccC-CCceEEeeCCcccc
Q 017997 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSK-GIKFQILSNPEFLA 160 (362)
Q Consensus 82 Vii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~~~-g~~~~v~~~Pe~~~ 160 (362)
|++++|..... ..+. -+.....++++.++|+.|+.++-..+.+.+.|++..- |.... ++.+|...
T Consensus 195 V~l~lPlt~~t-----------~~li--~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~gA~lD-V~~~EPl~ 260 (324)
T 3evt_A 195 IVNALPLTPTT-----------HHLF--STELFQQTKQQPMLINIGRGPAVDTTALMTALDHHQLSMAALD-VTEPEPLP 260 (324)
T ss_dssp EEECCCCCGGG-----------TTCB--SHHHHHTCCSCCEEEECSCGGGBCHHHHHHHHHTTSCSEEEES-SCSSSSCC
T ss_pred EEEcCCCchHH-----------HHhc--CHHHHhcCCCCCEEEEcCCChhhhHHHHHHHHHhCCceEEEeC-CCCCCCCC
Confidence 99999843221 1111 1345667899999999999888888888888876432 11111 24566544
Q ss_pred cCccccccCCCCeEEE
Q 017997 161 EGTAIQDLFNPDRVLI 176 (362)
Q Consensus 161 ~g~a~~~~~~~~~vii 176 (362)
+.+. ++..+.+++
T Consensus 261 ~~~p---L~~~~nvil 273 (324)
T 3evt_A 261 TDHP---LWQRDDVLI 273 (324)
T ss_dssp TTCG---GGGCSSEEE
T ss_pred CCCh---hhcCCCEEE
Confidence 3333 344444544
No 109
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=99.02 E-value=2.3e-09 Score=100.00 Aligned_cols=118 Identities=24% Similarity=0.321 Sum_probs=80.7
Q ss_pred CceEEEEcCChhHHHHHHHHHHcCCCC--eEEEEeCCHHHHH--HH--HcCCCCCCCCChHHHHhhhcCCCEEEecCHHh
Q 017997 1 MVKICCIGAGYVGGPTMAVIALKCPSI--EVAVVDISVSRIN--AW--NSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEK 74 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~la~~~~G~--~V~~~d~~~~~~~--~l--~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~ 74 (362)
+|||+|||+|.||.++|..|+.+ |+ +|+++|+++++++ .+ ..+ .++.. ..++..+++.+
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~--g~~~~V~l~d~~~~~~~~~~~~~~~~-~~~~~-----------~~~v~~~~~~~- 71 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQR--GIAREIVLEDIAKERVEAEVLDMQHG-SSFYP-----------TVSIDGSDDPE- 71 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCCSEEEEECSSHHHHHHHHHHHHHT-GGGST-----------TCEEEEESCGG-
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCCCEEEEEeCChhHHHHHHHHHHhh-hhhcC-----------CeEEEeCCCHH-
Confidence 48999999999999999999998 88 9999999998876 23 222 11110 12456666764
Q ss_pred hhcCCcEEEEeccCCCCCCCCCCCC----CCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHH
Q 017997 75 HVSEADIVFVSVNTPTKTQGLGAGK----AADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIE 138 (362)
Q Consensus 75 a~~~aDvVii~vptp~~~~g~~~~~----~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~ 138 (362)
+++++|+||+|+++|..... ++ ..+...+.++++.+.++ .++++|+. .+.|.+....+.
T Consensus 72 ~~~~aD~Vii~v~~~~~~g~---~r~~~~~~n~~~~~~~~~~i~~~-~~~~~vi~-~~Np~~~~~~~~ 134 (319)
T 1lld_A 72 ICRDADMVVITAGPRQKPGQ---SRLELVGATVNILKAIMPNLVKV-APNAIYML-ITNPVDIATHVA 134 (319)
T ss_dssp GGTTCSEEEECCCCCCCTTC---CHHHHHHHHHHHHHHHHHHHHHH-CTTSEEEE-CCSSHHHHHHHH
T ss_pred HhCCCCEEEECCCCCCCCCC---CHHHHHHHHHHHHHHHHHHHHHh-CCCceEEE-ecCchHHHHHHH
Confidence 58999999999987653200 00 01123455778888876 56776654 567777765554
No 110
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=99.02 E-value=2.8e-09 Score=99.64 Aligned_cols=118 Identities=25% Similarity=0.344 Sum_probs=79.3
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCC--eEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCC
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSI--EVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEA 79 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~--~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~a 79 (362)
|||+|||+|.||.++|..|+.+ |+ +|+++|+++++++.+... +..........++.. +|. +++++|
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~--g~~~~V~l~D~~~~~~~~~~~~--------l~~~~~~~~~~~i~~-~d~-~~~~~a 68 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMK--GFAREMVLIDVDKKRAEGDALD--------LIHGTPFTRRANIYA-GDY-ADLKGS 68 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCCSEEEEECSSHHHHHHHHHH--------HHHHGGGSCCCEEEE-CCG-GGGTTC
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCCeEEEEeCChHHHHHHHHH--------HHhhhhhcCCcEEEe-CCH-HHhCCC
Confidence 7999999999999999999998 88 999999999888765421 000000001123554 465 458999
Q ss_pred cEEEEeccCCCCCCCCCCCCCCC-----hHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHH
Q 017997 80 DIVFVSVNTPTKTQGLGAGKAAD-----LTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAI 137 (362)
Q Consensus 80 DvVii~vptp~~~~g~~~~~~~d-----~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l 137 (362)
|+||+|+|+|.... ....| ...++++++.+.++. ++.++++ .|.|.++...+
T Consensus 69 DvViiav~~~~~~g----~~r~dl~~~n~~i~~~i~~~i~~~~-~~~~ii~-~tNp~~~~~~~ 125 (319)
T 1a5z_A 69 DVVIVAAGVPQKPG----ETRLQLLGRNARVMKEIARNVSKYA-PDSIVIV-VTNPVDVLTYF 125 (319)
T ss_dssp SEEEECCCCCCCSS----CCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEE-CSSSHHHHHHH
T ss_pred CEEEEccCCCCCCC----CCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEE-eCCcHHHHHHH
Confidence 99999999875321 00122 233577888888875 5666554 46777765433
No 111
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=99.01 E-value=1.4e-09 Score=102.24 Aligned_cols=103 Identities=15% Similarity=0.165 Sum_probs=65.6
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcE
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (362)
++|+|||+|.||..+|..+... |++|++||++++. . .......++++++++||+
T Consensus 172 ktiGIIGlG~IG~~vA~~l~~~--G~~V~~~dr~~~~-----~-------------------~~~~~~~sl~ell~~aDv 225 (340)
T 4dgs_A 172 KRIGVLGLGQIGRALASRAEAF--GMSVRYWNRSTLS-----G-------------------VDWIAHQSPVDLARDSDV 225 (340)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT--TCEEEEECSSCCT-----T-------------------SCCEECSSHHHHHHTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCEEEEEcCCccc-----c-------------------cCceecCCHHHHHhcCCE
Confidence 6899999999999999999887 9999999997543 0 013345678888999999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHH-HHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhc
Q 017997 82 VFVSVNTPTKTQGLGAGKAADLTYWESAA-RVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHN 144 (362)
Q Consensus 82 Vii~vptp~~~~g~~~~~~~d~~~l~~~~-~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~ 144 (362)
|++++|.... + +..+ +...+.++++.++|+.|.-++-..+.+.+.+++.
T Consensus 226 Vil~vP~t~~-----------t---~~li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g 275 (340)
T 4dgs_A 226 LAVCVAASAA-----------T---QNIVDASLLQALGPEGIVVNVARGNVVDEDALIEALKSG 275 (340)
T ss_dssp EEECC------------------------CHHHHHHTTTTCEEEECSCC--------------C
T ss_pred EEEeCCCCHH-----------H---HHHhhHHHHhcCCCCCEEEECCCCcccCHHHHHHHHHcC
Confidence 9999984221 1 2222 4566778999999998887666666776666653
No 112
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=98.99 E-value=2.7e-09 Score=106.40 Aligned_cols=105 Identities=17% Similarity=0.159 Sum_probs=78.0
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcE
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (362)
++|+|||+|.||.++|..|... |++|++||+++.. +...+. + +..+ ++++++++||+
T Consensus 143 ~~vgIIG~G~IG~~vA~~l~~~--G~~V~~~d~~~~~-~~a~~~------------------g-~~~~-~l~e~~~~aDv 199 (529)
T 1ygy_A 143 KTVGVVGLGRIGQLVAQRIAAF--GAYVVAYDPYVSP-ARAAQL------------------G-IELL-SLDDLLARADF 199 (529)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT--TCEEEEECTTSCH-HHHHHH------------------T-CEEC-CHHHHHHHCSE
T ss_pred CEEEEEeeCHHHHHHHHHHHhC--CCEEEEECCCCCh-hHHHhc------------------C-cEEc-CHHHHHhcCCE
Confidence 6899999999999999999988 9999999997632 222110 1 2333 67788999999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHH-HHHHhhcCCCCEEEEeeCCccccHHHHHHHHHh
Q 017997 82 VFVSVNTPTKTQGLGAGKAADLTYWESAA-RVIADVSKSDKIVVEKSTVPVKTAEAIEKILTH 143 (362)
Q Consensus 82 Vii~vptp~~~~g~~~~~~~d~~~l~~~~-~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~ 143 (362)
|++|+|..... ...+ +.+.+.+++++++++.|+..+-..+.+.+.+++
T Consensus 200 V~l~~P~~~~t--------------~~~i~~~~~~~~k~g~ilin~arg~iv~~~aL~~al~~ 248 (529)
T 1ygy_A 200 ISVHLPKTPET--------------AGLIDKEALAKTKPGVIIVNAARGGLVDEAALADAITG 248 (529)
T ss_dssp EEECCCCSTTT--------------TTCBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHT
T ss_pred EEECCCCchHH--------------HHHhCHHHHhCCCCCCEEEECCCCchhhHHHHHHHHHc
Confidence 99999854211 1122 235677899999999998877777778777765
No 113
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=98.98 E-value=3.2e-09 Score=99.14 Aligned_cols=115 Identities=18% Similarity=0.330 Sum_probs=74.4
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCC--eEEEEeCCHHHHHH----HHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhh
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSI--EVAVVDISVSRINA----WNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKH 75 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~--~V~~~d~~~~~~~~----l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a 75 (362)
|||+|||+|++|.++|..|+.. |+ +|+++|+++++++. +.... ++. ...+++.+..++
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~~--~~~~ev~L~Di~~~~~~g~~~dl~~~~-~~~-------------~~~~i~~~~~~a 71 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMALR--QTANELVLIDVFKEKAIGEAMDINHGL-PFM-------------GQMSLYAGDYSD 71 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT--TCSSEEEEECCC---CCHHHHHHTTSC-CCT-------------TCEEEC--CGGG
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCCEEEEEeCChHHHHHHHHHHHHhH-Hhc-------------CCeEEEECCHHH
Confidence 6899999999999999999998 66 99999999876543 22211 110 123333222456
Q ss_pred hcCCcEEEEeccCCCCCCCCCCCC----CCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHH
Q 017997 76 VSEADIVFVSVNTPTKTQGLGAGK----AADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAI 137 (362)
Q Consensus 76 ~~~aDvVii~vptp~~~~g~~~~~----~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l 137 (362)
+++||+||+++++|... |. ++ ..+...++++.+.+.++. ++.+|++ .|.|+++.-.+
T Consensus 72 ~~~aDvVii~~g~p~k~-g~--~r~dl~~~n~~i~~~i~~~i~~~~-p~a~viv-~tNPv~~~~~~ 132 (318)
T 1y6j_A 72 VKDCDVIVVTAGANRKP-GE--TRLDLAKKNVMIAKEVTQNIMKYY-NHGVILV-VSNPVDIITYM 132 (318)
T ss_dssp GTTCSEEEECCCC---------CHHHHHHHHHHHHHHHHHHHHHHC-CSCEEEE-CSSSHHHHHHH
T ss_pred hCCCCEEEEcCCCCCCC-Cc--CHHHHHHhhHHHHHHHHHHHHHhC-CCcEEEE-ecCcHHHHHHH
Confidence 99999999999988643 10 00 123345678888888884 6777766 58899886544
No 114
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=98.97 E-value=4.9e-09 Score=98.38 Aligned_cols=107 Identities=15% Similarity=0.026 Sum_probs=78.7
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcE
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (362)
++|+|||+|.||..+|..+... |++|++||++++.. ...+. + ... .++++++++||+
T Consensus 166 ~tvgIIGlG~IG~~vA~~l~~~--G~~V~~~d~~~~~~-~~~~~------------------g-~~~-~~l~ell~~aDv 222 (335)
T 2g76_A 166 KTLGILGLGRIGREVATRMQSF--GMKTIGYDPIISPE-VSASF------------------G-VQQ-LPLEEIWPLCDF 222 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT--TCEEEEECSSSCHH-HHHHT------------------T-CEE-CCHHHHGGGCSE
T ss_pred CEEEEEeECHHHHHHHHHHHHC--CCEEEEECCCcchh-hhhhc------------------C-cee-CCHHHHHhcCCE
Confidence 5899999999999999999877 99999999976542 22210 1 222 367788999999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhc
Q 017997 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHN 144 (362)
Q Consensus 82 Vii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~ 144 (362)
|++|+|..... ..+. -+...+.++++.++|+.|+.++-..+.+.+.+++.
T Consensus 223 V~l~~P~t~~t-----------~~li--~~~~l~~mk~gailIN~arg~vvd~~aL~~aL~~g 272 (335)
T 2g76_A 223 ITVHTPLLPST-----------TGLL--NDNTFAQCKKGVRVVNCARGGIVDEGALLRALQSG 272 (335)
T ss_dssp EEECCCCCTTT-----------TTSB--CHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHT
T ss_pred EEEecCCCHHH-----------HHhh--CHHHHhhCCCCcEEEECCCccccCHHHHHHHHHhC
Confidence 99999864321 1111 13566778999999999997666667787777764
No 115
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=98.97 E-value=2.6e-09 Score=99.78 Aligned_cols=116 Identities=17% Similarity=0.290 Sum_probs=79.9
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCC-eEEEEeCCHHHHHHHHcCCCCCCCCChHHHHh-hhcCCCEEEecCHHhhhcCC
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISVSRINAWNSDQLPIYEPGLDGVVK-QCRGKNLFFSTDVEKHVSEA 79 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~-~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~-~~~~~~l~~t~d~~~a~~~a 79 (362)
|||+|||+|.||.++|..|+.+ |+ +|++||+++++++..... +..... .....+++.++|+ +++++|
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~--g~~~V~l~D~~~~~~~~~~~~--------l~~~~~~~~~~~~i~~t~d~-~a~~~a 73 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKD--NLADVVLFDIAEGIPQGKALD--------ITHSMVMFGSTSKVIGTDDY-ADISGS 73 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCCEEEEECSSSSHHHHHHHH--------HHHHHHHHTCCCCEEEESCG-GGGTTC
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCceEEEEeCCchHHHHHHHH--------HHhhhhhcCCCcEEEECCCH-HHhCCC
Confidence 6999999999999999999999 88 999999998887754210 000000 0113468888888 569999
Q ss_pred cEEEEeccCCCCCCCCCCCC----CCChHHHHHHHHHHHhhcCCCCEEEEeeCCcccc
Q 017997 80 DIVFVSVNTPTKTQGLGAGK----AADLTYWESAARVIADVSKSDKIVVEKSTVPVKT 133 (362)
Q Consensus 80 DvVii~vptp~~~~g~~~~~----~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt 133 (362)
|+||+|++.|... |. ++ ..+...++++++.+.++. ++.++++-| .|.+.
T Consensus 74 DiVi~avg~p~~~-g~--~r~d~~~~~~~i~~~i~~~i~~~~-~~~iii~~s-Np~~~ 126 (317)
T 2ewd_A 74 DVVIITASIPGRP-KD--DRSELLFGNARILDSVAEGVKKYC-PNAFVICIT-NPLDV 126 (317)
T ss_dssp SEEEECCCCSSCC-SS--CGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEECC-SSHHH
T ss_pred CEEEEeCCCCCCC-CC--cHHHHHHhhHHHHHHHHHHHHHHC-CCcEEEEeC-ChHHH
Confidence 9999999887643 10 11 012344677888888886 477776544 34443
No 116
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=98.97 E-value=2.8e-09 Score=100.59 Aligned_cols=108 Identities=13% Similarity=0.081 Sum_probs=79.9
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcE
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (362)
++|+|||+|.||..+|..|... |++|++||++++....... ......+++++++.||+
T Consensus 169 ~tvGIIG~G~IG~~vA~~l~~~--G~~V~~~d~~~~~~~~~~~--------------------g~~~~~~l~ell~~aDv 226 (347)
T 1mx3_A 169 ETLGIIGLGRVGQAVALRAKAF--GFNVLFYDPYLSDGVERAL--------------------GLQRVSTLQDLLFHSDC 226 (347)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT--TCEEEEECTTSCTTHHHHH--------------------TCEECSSHHHHHHHCSE
T ss_pred CEEEEEeECHHHHHHHHHHHHC--CCEEEEECCCcchhhHhhc--------------------CCeecCCHHHHHhcCCE
Confidence 5899999999999999999887 9999999987542111000 13444578888899999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhc
Q 017997 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHN 144 (362)
Q Consensus 82 Vii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~ 144 (362)
|++++|..... ..+.. +...+.++++.++|+.|+.++-..+.+.+.+++.
T Consensus 227 V~l~~P~t~~t-----------~~li~--~~~l~~mk~gailIN~arg~~vd~~aL~~aL~~g 276 (347)
T 1mx3_A 227 VTLHCGLNEHN-----------HHLIN--DFTVKQMRQGAFLVNTARGGLVDEKALAQALKEG 276 (347)
T ss_dssp EEECCCCCTTC-----------TTSBS--HHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHT
T ss_pred EEEcCCCCHHH-----------HHHhH--HHHHhcCCCCCEEEECCCChHHhHHHHHHHHHhC
Confidence 99999853221 11111 3455678999999999998888888888888764
No 117
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=98.96 E-value=8.1e-09 Score=97.75 Aligned_cols=134 Identities=13% Similarity=0.130 Sum_probs=89.2
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcE
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (362)
++|+|||+|.||..+|..+... |++|++||+++.. +...+. .... .+++++++.||+
T Consensus 177 ktvGIIGlG~IG~~vA~~l~~f--G~~V~~~d~~~~~-~~~~~~-------------------g~~~-~~l~ell~~aDv 233 (365)
T 4hy3_A 177 SEIGIVGFGDLGKALRRVLSGF--RARIRVFDPWLPR-SMLEEN-------------------GVEP-ASLEDVLTKSDF 233 (365)
T ss_dssp SEEEEECCSHHHHHHHHHHTTS--CCEEEEECSSSCH-HHHHHT-------------------TCEE-CCHHHHHHSCSE
T ss_pred CEEEEecCCcccHHHHHhhhhC--CCEEEEECCCCCH-HHHhhc-------------------Ceee-CCHHHHHhcCCE
Confidence 5899999999999999998776 9999999997532 222211 1232 478888999999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhccC--CCceEEeeCCccc
Q 017997 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSK--GIKFQILSNPEFL 159 (362)
Q Consensus 82 Vii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~~~--g~~~~v~~~Pe~~ 159 (362)
|++++|..... ..+. -+...+.++++.++|+.|.-++-..+.+.+.|++..- +.| ++.+|-.
T Consensus 234 V~l~~Plt~~T-----------~~li--~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~aaLD---V~~~EPl 297 (365)
T 4hy3_A 234 IFVVAAVTSEN-----------KRFL--GAEAFSSMRRGAAFILLSRADVVDFDALMAAVSSGHIVAASD---VYPEEPL 297 (365)
T ss_dssp EEECSCSSCC--------------CC--CHHHHHTSCTTCEEEECSCGGGSCHHHHHHHHHTTSSEEEES---CCSSSSC
T ss_pred EEEcCcCCHHH-----------Hhhc--CHHHHhcCCCCcEEEECcCCchhCHHHHHHHHHcCCceEEee---CCCCCCC
Confidence 99998854221 1111 1456677899999999998877777888877776421 122 2455544
Q ss_pred ccCccccccCCCCeEEEe
Q 017997 160 AEGTAIQDLFNPDRVLIG 177 (362)
Q Consensus 160 ~~g~a~~~~~~~~~viiG 177 (362)
.+.+. ++..+.+++.
T Consensus 298 ~~~~p---L~~~~nvilT 312 (365)
T 4hy3_A 298 PLDHP---VRSLKGFIRS 312 (365)
T ss_dssp CTTCG---GGTCTTEEEC
T ss_pred CCCCh---hhcCCCEEEC
Confidence 33333 3444455553
No 118
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=98.95 E-value=2.9e-09 Score=102.97 Aligned_cols=209 Identities=13% Similarity=0.038 Sum_probs=117.4
Q ss_pred CceEEEEcCChhHHHHHHHHHHc----CCCCeEEEEeCCH-HHHHHHH-cCCCCCCCCChHHHHhhhcCCCEEEecCHHh
Q 017997 1 MVKICCIGAGYVGGPTMAVIALK----CPSIEVAVVDISV-SRINAWN-SDQLPIYEPGLDGVVKQCRGKNLFFSTDVEK 74 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~la~~----~~G~~V~~~d~~~-~~~~~l~-~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~ 74 (362)
++||+|||+|.||.++|..|.+. ++|++|++.+++. ...+... .|.... .. .+.++.+
T Consensus 54 iKkIgIIGlGsMG~AmA~nLr~s~~~~g~G~~ViVg~r~~sks~e~A~e~G~~v~--------------d~--ta~s~aE 117 (525)
T 3fr7_A 54 IKQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSKSFDEARAAGFTEE--------------SG--TLGDIWE 117 (525)
T ss_dssp CSEEEEECCTTHHHHHHHHHHHHHHHTTCCCEEEEEECTTCSCHHHHHHTTCCTT--------------TT--CEEEHHH
T ss_pred CCEEEEEeEhHHHHHHHHHHHhcccccCCCCEEEEEeCCchhhHHHHHHCCCEEe--------------cC--CCCCHHH
Confidence 47999999999999999999876 3468888665543 2333222 221000 00 1246778
Q ss_pred hhcCCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccH-HHHHHHHHhccCCCceEEe
Q 017997 75 HVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTA-EAIEKILTHNSKGIKFQIL 153 (362)
Q Consensus 75 a~~~aDvVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~-~~l~~~l~~~~~g~~~~v~ 153 (362)
++++||+||++||.. ...+++++|.++++++++|++.+ |.. ..+.+.......+.+ .+.
T Consensus 118 Aa~~ADVVILaVP~~---------------~~~eVl~eI~p~LK~GaILs~Aa----Gf~I~~le~~~i~~p~dv~-VVr 177 (525)
T 3fr7_A 118 TVSGSDLVLLLISDA---------------AQADNYEKIFSHMKPNSILGLSH----GFLLGHLQSAGLDFPKNIS-VIA 177 (525)
T ss_dssp HHHHCSEEEECSCHH---------------HHHHHHHHHHHHSCTTCEEEESS----SHHHHHHHHTTCCCCTTSE-EEE
T ss_pred HHhcCCEEEECCChH---------------HHHHHHHHHHHhcCCCCeEEEeC----CCCHHHHhhhcccCCCCCc-EEE
Confidence 899999999998831 23467788999999999976543 432 222210001101223 234
Q ss_pred eCCcccccCcccc-----c----cCCCC-eEEEecCCCcchHHHHHHHHHHHhccCCCCcEEeCChhHHHHHHHH-Hh-H
Q 017997 154 SNPEFLAEGTAIQ-----D----LFNPD-RVLIGGRETPEGQKAVKALKDVYAHWVPEDRILTTNLWSAELSKLA-AN-A 221 (362)
Q Consensus 154 ~~Pe~~~~g~a~~-----~----~~~~~-~viiG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ae~~Kl~-~N-~ 221 (362)
.+|. .||..+. + ....+ -+.+..+. +.+..+.+..++..++. ..+..++...---..++ +. .
T Consensus 178 VmPN--tPg~~VR~~y~~G~~~~g~Gv~~liAv~qd~---tgea~e~alala~aiG~-~~vieTtf~eE~e~DLfgeqtv 251 (525)
T 3fr7_A 178 VCPK--GMGPSVRRLYVQGKEINGAGINSSFAVHQDV---DGRATDVALGWSVALGS-PFTFATTLEQEYKSDIFGERGI 251 (525)
T ss_dssp EEES--SCHHHHHHHHHHHTTSTTCSCCEEEEEEECS---SSCHHHHHHHHHHHTTC-SEEEECCHHHHHHHHHHHHHTT
T ss_pred EecC--CCchhHHHHHhcccccccCCccEEEEcCCCC---CHHHHHHHHHHHHHCCC-CeeeeeeeeeehhHhhhhhHhh
Confidence 5663 2333211 1 01122 23333222 35678899999999974 33433443321112222 11 2
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHHHHHh
Q 017997 222 FLAQRISSVNAMSALCEATGANVSQVAFAV 251 (362)
Q Consensus 222 ~~~~~ia~~nE~~~l~~~~g~d~~~v~~~~ 251 (362)
+.....+++.-+.....+.|++++......
T Consensus 252 LsG~~pAlieA~~d~lVe~G~~pe~Ay~~~ 281 (525)
T 3fr7_A 252 LLGAVHGIVEALFRRYTEQGMDEEMAYKNT 281 (525)
T ss_dssp TTHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred hcCcHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 333345677777777788899987755543
No 119
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=98.95 E-value=2e-09 Score=103.00 Aligned_cols=108 Identities=15% Similarity=0.156 Sum_probs=79.6
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcE
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (362)
++|+|||+|.||..+|..+... |++|++||+++...+...+ ..+....+++++++.||+
T Consensus 192 ktvGIIGlG~IG~~vA~~l~a~--G~~V~~~d~~~~~~~~~~~-------------------~G~~~~~~l~ell~~aDv 250 (393)
T 2nac_A 192 MHVGTVAAGRIGLAVLRRLAPF--DVHLHYTDRHRLPESVEKE-------------------LNLTWHATREDMYPVCDV 250 (393)
T ss_dssp CEEEEECCSHHHHHHHHHHGGG--TCEEEEECSSCCCHHHHHH-------------------HTCEECSSHHHHGGGCSE
T ss_pred CEEEEEeECHHHHHHHHHHHhC--CCEEEEEcCCccchhhHhh-------------------cCceecCCHHHHHhcCCE
Confidence 6899999999999999999887 9999999997544332221 013444577888999999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHH-HHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhc
Q 017997 82 VFVSVNTPTKTQGLGAGKAADLTYWESAA-RVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHN 144 (362)
Q Consensus 82 Vii~vptp~~~~g~~~~~~~d~~~l~~~~-~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~ 144 (362)
|++++|..... +..+ +...+.++++.++|+.|+..+-..+.+.+.+++.
T Consensus 251 V~l~~Plt~~t--------------~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g 300 (393)
T 2nac_A 251 VTLNCPLHPET--------------EHMINDETLKLFKRGAYIVNTARGKLCDRDAVARALESG 300 (393)
T ss_dssp EEECSCCCTTT--------------TTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHTT
T ss_pred EEEecCCchHH--------------HHHhhHHHHhhCCCCCEEEECCCchHhhHHHHHHHHHcC
Confidence 99999853221 1112 3456778999999999987666667787777764
No 120
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=98.95 E-value=3.7e-09 Score=100.46 Aligned_cols=109 Identities=19% Similarity=0.153 Sum_probs=80.9
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCe-EEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCc
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIE-VAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~-V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (362)
++|+|||+|.||..+|..+... |++ |++||+++...+...+ ......+++++++++||
T Consensus 165 ~tvgIIG~G~IG~~vA~~l~~~--G~~~V~~~d~~~~~~~~~~~-------------------~g~~~~~~l~ell~~aD 223 (364)
T 2j6i_A 165 KTIATIGAGRIGYRVLERLVPF--NPKELLYYDYQALPKDAEEK-------------------VGARRVENIEELVAQAD 223 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHGGG--CCSEEEEECSSCCCHHHHHH-------------------TTEEECSSHHHHHHTCS
T ss_pred CEEEEECcCHHHHHHHHHHHhC--CCcEEEEECCCccchhHHHh-------------------cCcEecCCHHHHHhcCC
Confidence 5899999999999999999887 897 9999998654443322 12444567888889999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhc
Q 017997 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHN 144 (362)
Q Consensus 81 vVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~ 144 (362)
+|++++|..... ..+. -+...+.++++.++|+.|+.++-..+.+.+.+++.
T Consensus 224 vV~l~~P~t~~t-----------~~li--~~~~l~~mk~ga~lIn~arG~~vd~~aL~~aL~~g 274 (364)
T 2j6i_A 224 IVTVNAPLHAGT-----------KGLI--NKELLSKFKKGAWLVNTARGAICVAEDVAAALESG 274 (364)
T ss_dssp EEEECCCCSTTT-----------TTCB--CHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHT
T ss_pred EEEECCCCChHH-----------HHHh--CHHHHhhCCCCCEEEECCCCchhCHHHHHHHHHcC
Confidence 999999853221 1111 13455778999999999987776777888878764
No 121
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=98.95 E-value=3.9e-09 Score=97.98 Aligned_cols=116 Identities=19% Similarity=0.358 Sum_probs=73.7
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCC--eEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCC
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSI--EVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEA 79 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~--~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~a 79 (362)
|||+|||+|.||.++|..|+.+ |+ +|+++|+++++++.......... +- . ...+++. ++. +++++|
T Consensus 1 mkI~VIGaG~vG~~la~~la~~--g~~~eV~L~D~~~~~~~~~~~~l~~~~-~~----~---~~~~i~~-~~~-~a~~~a 68 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLR--GSCSELVLVDRDEDRAQAEAEDIAHAA-PV----S---HGTRVWH-GGH-SELADA 68 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCCSEEEEECSSHHHHHHHHHHHTTSC-CT----T---SCCEEEE-ECG-GGGTTC
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCCEEEEEeCCHHHHHHHHHhhhhhh-hh----c---CCeEEEE-CCH-HHhCCC
Confidence 7999999999999999999998 88 99999999987764322100000 00 0 0123443 455 469999
Q ss_pred cEEEEeccCCCCCCCCCCCC----CCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccH
Q 017997 80 DIVFVSVNTPTKTQGLGAGK----AADLTYWESAARVIADVSKSDKIVVEKSTVPVKTA 134 (362)
Q Consensus 80 DvVii~vptp~~~~g~~~~~----~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~ 134 (362)
|+||++++.|... |. ++ ..++..++++++.+.++ .++.+|++ .|.|.++.
T Consensus 69 DvVIi~~~~~~~~-g~--~r~dl~~~n~~i~~~i~~~i~~~-~p~~~vi~-~tNP~~~~ 122 (304)
T 2v6b_A 69 QVVILTAGANQKP-GE--SRLDLLEKNADIFRELVPQITRA-APDAVLLV-TSNPVDLL 122 (304)
T ss_dssp SEEEECC---------------CHHHHHHHHHHHHHHHHHH-CSSSEEEE-CSSSHHHH
T ss_pred CEEEEcCCCCCCC-CC--cHHHHHHhHHHHHHHHHHHHHHh-CCCeEEEE-ecCchHHH
Confidence 9999999876532 10 00 12345567888888888 47777665 46666653
No 122
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=98.94 E-value=2.8e-09 Score=102.39 Aligned_cols=105 Identities=15% Similarity=0.163 Sum_probs=77.6
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcE
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (362)
++|+|||+|.||..+|..+... |++|++||+++.. . .+......++++++++||+
T Consensus 157 ktvGIIGlG~IG~~vA~~l~~~--G~~V~~yd~~~~~---------~--------------~~~~~~~~sl~ell~~aDv 211 (416)
T 3k5p_A 157 KTLGIVGYGNIGSQVGNLAESL--GMTVRYYDTSDKL---------Q--------------YGNVKPAASLDELLKTSDV 211 (416)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECTTCCC---------C--------------BTTBEECSSHHHHHHHCSE
T ss_pred CEEEEEeeCHHHHHHHHHHHHC--CCEEEEECCcchh---------c--------------ccCcEecCCHHHHHhhCCE
Confidence 5899999999999999999887 9999999986311 0 0123445688898999999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhc
Q 017997 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHN 144 (362)
Q Consensus 82 Vii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~ 144 (362)
|++++|..... ..+. -+.....++++.++|+.|..++-..+.+.+.|++.
T Consensus 212 V~lhvPlt~~T-----------~~li--~~~~l~~mk~gailIN~aRG~vvd~~aL~~aL~~g 261 (416)
T 3k5p_A 212 VSLHVPSSKST-----------SKLI--TEAKLRKMKKGAFLINNARGSDVDLEALAKVLQEG 261 (416)
T ss_dssp EEECCCC----------------CCB--CHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHHTT
T ss_pred EEEeCCCCHHH-----------hhhc--CHHHHhhCCCCcEEEECCCChhhhHHHHHHHHHcC
Confidence 99999853221 1111 13455678999999999998777788888878664
No 123
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=98.94 E-value=4.8e-09 Score=98.45 Aligned_cols=106 Identities=12% Similarity=0.187 Sum_probs=79.5
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcE
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (362)
++|+|||+|.||.++|..+... |++|++||++++.... ..+ .... ++++++++||+
T Consensus 142 ~tvgIiG~G~IG~~vA~~l~~~--G~~V~~~d~~~~~~~~-~~g--------------------~~~~-~l~ell~~aDv 197 (334)
T 2pi1_A 142 LTLGVIGTGRIGSRVAMYGLAF--GMKVLCYDVVKREDLK-EKG--------------------CVYT-SLDELLKESDV 197 (334)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCHHHH-HTT--------------------CEEC-CHHHHHHHCSE
T ss_pred ceEEEECcCHHHHHHHHHHHHC--cCEEEEECCCcchhhH-hcC--------------------ceec-CHHHHHhhCCE
Confidence 5899999999999999999987 9999999998755422 111 2333 47888999999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhc
Q 017997 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHN 144 (362)
Q Consensus 82 Vii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~ 144 (362)
|++++|......+ -. -+...+.++++.++|+.|+..+-..+.+.+.|++.
T Consensus 198 V~l~~P~t~~t~~-----li--------~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g 247 (334)
T 2pi1_A 198 ISLHVPYTKETHH-----MI--------NEERISLMKDGVYLINTARGKVVDTDALYRAYQRG 247 (334)
T ss_dssp EEECCCCCTTTTT-----CB--------CHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTT
T ss_pred EEEeCCCChHHHH-----hh--------CHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhC
Confidence 9999985322111 11 13455678999999999988777788888878664
No 124
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=98.94 E-value=1.8e-09 Score=100.06 Aligned_cols=103 Identities=16% Similarity=0.190 Sum_probs=76.9
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcE
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (362)
++|+|||+|.||..+|..+... |++|++||++++ +. + .....+++++++.||+
T Consensus 125 ~~vgIIG~G~IG~~~A~~l~~~--G~~V~~~dr~~~--~~---~--------------------~~~~~~l~ell~~aDv 177 (303)
T 1qp8_A 125 EKVAVLGLGEIGTRVGKILAAL--GAQVRGFSRTPK--EG---P--------------------WRFTNSLEEALREARA 177 (303)
T ss_dssp CEEEEESCSTHHHHHHHHHHHT--TCEEEEECSSCC--CS---S--------------------SCCBSCSHHHHTTCSE
T ss_pred CEEEEEccCHHHHHHHHHHHHC--CCEEEEECCCcc--cc---C--------------------cccCCCHHHHHhhCCE
Confidence 6899999999999999999988 999999999754 10 1 0112456778899999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhc
Q 017997 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHN 144 (362)
Q Consensus 82 Vii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~ 144 (362)
|++|+|..... ..+. -+...+.++++.++|+.|+.++-..+.+.+.+++.
T Consensus 178 V~l~~P~~~~t-----------~~~i--~~~~l~~mk~gailin~srg~~vd~~aL~~aL~~g 227 (303)
T 1qp8_A 178 AVCALPLNKHT-----------RGLV--KYQHLALMAEDAVFVNVGRAEVLDRDGVLRILKER 227 (303)
T ss_dssp EEECCCCSTTT-----------TTCB--CHHHHTTSCTTCEEEECSCGGGBCHHHHHHHHHHC
T ss_pred EEEeCcCchHH-----------HHHh--CHHHHhhCCCCCEEEECCCCcccCHHHHHHHHHhC
Confidence 99999854221 1111 13566788999999999997776677787777764
No 125
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=98.93 E-value=7.8e-10 Score=103.20 Aligned_cols=136 Identities=13% Similarity=0.131 Sum_probs=89.5
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcE
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (362)
++|+|||+|.||.++|..+... |++|++||++++..+.+ .......++++++++||+
T Consensus 141 ~tvGIIGlG~IG~~vA~~l~~~--G~~V~~~dr~~~~~~~~---------------------~~~~~~~~l~ell~~aDv 197 (324)
T 3hg7_A 141 RTLLILGTGSIGQHIAHTGKHF--GMKVLGVSRSGRERAGF---------------------DQVYQLPALNKMLAQADV 197 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCCCTTC---------------------SEEECGGGHHHHHHTCSE
T ss_pred ceEEEEEECHHHHHHHHHHHhC--CCEEEEEcCChHHhhhh---------------------hcccccCCHHHHHhhCCE
Confidence 5899999999999999999988 99999999975221100 112223578888999999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhccC-CCceEEeeCCcccc
Q 017997 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSK-GIKFQILSNPEFLA 160 (362)
Q Consensus 82 Vii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~~~-g~~~~v~~~Pe~~~ 160 (362)
|++++|......+ -.+ +.....++++.++|+.|+.++-..+.+.+.|++... |.... ++.+|-..
T Consensus 198 V~l~lPlt~~T~~-----li~--------~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~ga~lD-V~~~EPl~ 263 (324)
T 3hg7_A 198 IVSVLPATRETHH-----LFT--------ASRFEHCKPGAILFNVGRGNAINEGDLLTALRTGKLGMAVLD-VFEQEPLP 263 (324)
T ss_dssp EEECCCCCSSSTT-----SBC--------TTTTTCSCTTCEEEECSCGGGBCHHHHHHHHHTTSSSEEEES-CCSSSSCC
T ss_pred EEEeCCCCHHHHH-----HhH--------HHHHhcCCCCcEEEECCCchhhCHHHHHHHHHcCCceEEEec-cCCCCCCC
Confidence 9999985322111 111 234566899999999999887778888888876432 21111 24555443
Q ss_pred cCccccccCCCCeEEEe
Q 017997 161 EGTAIQDLFNPDRVLIG 177 (362)
Q Consensus 161 ~g~a~~~~~~~~~viiG 177 (362)
+.+ .++..+.+++.
T Consensus 264 ~~~---pL~~~~nvilT 277 (324)
T 3hg7_A 264 ADS---PLWGQPNLIIT 277 (324)
T ss_dssp TTC---TTTTCTTEEEC
T ss_pred CCC---hhhcCCCEEEe
Confidence 333 23444455543
No 126
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=98.93 E-value=4.2e-09 Score=98.76 Aligned_cols=108 Identities=9% Similarity=0.096 Sum_probs=79.7
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcE
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (362)
++|+|||+|.||..+|..+... |++|++||+++...+...+ ..... .+++++++.||+
T Consensus 146 ~tvGIIG~G~IG~~vA~~l~~~--G~~V~~~d~~~~~~~~~~~-------------------~g~~~-~~l~ell~~aDv 203 (330)
T 4e5n_A 146 ATVGFLGMGAIGLAMADRLQGW--GATLQYHEAKALDTQTEQR-------------------LGLRQ-VACSELFASSDF 203 (330)
T ss_dssp CEEEEECCSHHHHHHHHHTTTS--CCEEEEECSSCCCHHHHHH-------------------HTEEE-CCHHHHHHHCSE
T ss_pred CEEEEEeeCHHHHHHHHHHHHC--CCEEEEECCCCCcHhHHHh-------------------cCcee-CCHHHHHhhCCE
Confidence 5899999999999999999877 9999999998633332221 01333 368888999999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhc
Q 017997 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHN 144 (362)
Q Consensus 82 Vii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~ 144 (362)
|++++|...... .+ .-+...+.++++.++|+.|..++-..+.+.+.|++.
T Consensus 204 V~l~~P~t~~t~-----------~l--i~~~~l~~mk~gailIN~arg~~vd~~aL~~aL~~g 253 (330)
T 4e5n_A 204 ILLALPLNADTL-----------HL--VNAELLALVRPGALLVNPCRGSVVDEAAVLAALERG 253 (330)
T ss_dssp EEECCCCSTTTT-----------TC--BCHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHT
T ss_pred EEEcCCCCHHHH-----------HH--hCHHHHhhCCCCcEEEECCCCchhCHHHHHHHHHhC
Confidence 999998532211 11 113566788999999999987777777888777764
No 127
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=98.93 E-value=1e-08 Score=94.55 Aligned_cols=117 Identities=19% Similarity=0.252 Sum_probs=78.5
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCC--eEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhh-cCCCEEEecCHHhhhcC
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSI--EVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQC-RGKNLFFSTDVEKHVSE 78 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~--~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~-~~~~l~~t~d~~~a~~~ 78 (362)
|||+|||+|.||.++|..|+.+ |+ +|++||+++++++..... +.+..... ...+++.++| .+++++
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~--~~~~~v~L~D~~~~~~~g~~~d--------l~~~~~~~~~~~~i~~t~d-~~a~~~ 69 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLN--LDVDEIALVDIAEDLAVGEAMD--------LAHAAAGIDKYPKIVGGAD-YSLLKG 69 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--SCCSEEEEECSSHHHHHHHHHH--------HHHHHHTTTCCCEEEEESC-GGGGTT
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCCeEEEEECChHHHHHHHHH--------HHhhhhhcCCCCEEEEeCC-HHHhCC
Confidence 8999999999999999999998 77 999999999887632110 00000000 1235777788 567999
Q ss_pred CcEEEEeccCCCCCCCCCCCC----CCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccH
Q 017997 79 ADIVFVSVNTPTKTQGLGAGK----AADLTYWESAARVIADVSKSDKIVVEKSTVPVKTA 134 (362)
Q Consensus 79 aDvVii~vptp~~~~g~~~~~----~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~ 134 (362)
||+||++.+.|... |. ++ ..+.+.+++..+.+.++ .++.++++-| .|..+.
T Consensus 70 aDiVViaag~~~kp-G~--~R~dl~~~N~~i~~~i~~~i~~~-~p~a~iivvs-NPvd~~ 124 (294)
T 1oju_A 70 SEIIVVTAGLARKP-GM--TRLDLAHKNAGIIKDIAKKIVEN-APESKILVVT-NPMDVM 124 (294)
T ss_dssp CSEEEECCCCCCCS-SC--CHHHHHHHHHHHHHHHHHHHHTT-STTCEEEECS-SSHHHH
T ss_pred CCEEEECCCCCCCC-CC--cHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEeC-CcchHH
Confidence 99999999887543 21 10 11234456666777777 4666666544 566654
No 128
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=98.92 E-value=5.7e-09 Score=100.37 Aligned_cols=105 Identities=17% Similarity=0.129 Sum_probs=78.8
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcE
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (362)
++|||||+|.||..+|..+... |++|++||+++.. . .+.....++++++++.||+
T Consensus 146 ktlGiIGlG~IG~~vA~~l~~~--G~~V~~~d~~~~~-----~------------------~~~~~~~~~l~ell~~aDv 200 (404)
T 1sc6_A 146 KKLGIIGYGHIGTQLGILAESL--GMYVYFYDIENKL-----P------------------LGNATQVQHLSDLLNMSDV 200 (404)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCC-----C------------------CTTCEECSCHHHHHHHCSE
T ss_pred CEEEEEeECHHHHHHHHHHHHC--CCEEEEEcCCchh-----c------------------cCCceecCCHHHHHhcCCE
Confidence 5899999999999999999887 9999999986421 0 0123455678888999999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhc
Q 017997 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHN 144 (362)
Q Consensus 82 Vii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~ 144 (362)
|++++|..... ..+.. +...+.++++.++|+.|+..+-..+.+.+.+++.
T Consensus 201 V~l~~P~t~~t-----------~~li~--~~~l~~mk~ga~lIN~aRg~~vd~~aL~~aL~~g 250 (404)
T 1sc6_A 201 VSLHVPENPST-----------KNMMG--AKEISLMKPGSLLINASRGTVVDIPALADALASK 250 (404)
T ss_dssp EEECCCSSTTT-----------TTCBC--HHHHHHSCTTEEEEECSCSSSBCHHHHHHHHHTT
T ss_pred EEEccCCChHH-----------HHHhh--HHHHhhcCCCeEEEECCCChHHhHHHHHHHHHcC
Confidence 99999854221 11111 3445678999999999998777777888877763
No 129
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=98.92 E-value=6e-10 Score=103.72 Aligned_cols=107 Identities=8% Similarity=0.062 Sum_probs=78.1
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcE
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (362)
++|+|||+|.||..+|..+... |++|++||++++..+.+ . ......++++++++||+
T Consensus 140 ~tvGIiG~G~IG~~vA~~l~~~--G~~V~~~dr~~~~~~~~------------~---------~~~~~~~l~ell~~aDi 196 (315)
T 3pp8_A 140 FSVGIMGAGVLGAKVAESLQAW--GFPLRCWSRSRKSWPGV------------E---------SYVGREELRAFLNQTRV 196 (315)
T ss_dssp CCEEEECCSHHHHHHHHHHHTT--TCCEEEEESSCCCCTTC------------E---------EEESHHHHHHHHHTCSE
T ss_pred CEEEEEeeCHHHHHHHHHHHHC--CCEEEEEcCCchhhhhh------------h---------hhcccCCHHHHHhhCCE
Confidence 6899999999999999999887 99999999975422110 0 01112467788999999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhc
Q 017997 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHN 144 (362)
Q Consensus 82 Vii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~ 144 (362)
|++++|..... ..+. -+...+.++++.++|+.|.-++-..+.+.+.|++.
T Consensus 197 V~l~~Plt~~t-----------~~li--~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g 246 (315)
T 3pp8_A 197 LINLLPNTAQT-----------VGII--NSELLDQLPDGAYVLNLARGVHVQEADLLAALDSG 246 (315)
T ss_dssp EEECCCCCGGG-----------TTCB--SHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHT
T ss_pred EEEecCCchhh-----------hhhc--cHHHHhhCCCCCEEEECCCChhhhHHHHHHHHHhC
Confidence 99999843221 1111 13456778999999999988777778888878664
No 130
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=98.91 E-value=6.7e-09 Score=97.65 Aligned_cols=105 Identities=17% Similarity=0.241 Sum_probs=78.8
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcE
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (362)
++|+|||+|.||..+|..+... |++|++||++++. ... ....+. ++++++++||+
T Consensus 149 ktvgIiGlG~IG~~vA~~l~~~--G~~V~~~d~~~~~--~~~--------------------~~~~~~-~l~ell~~aDv 203 (343)
T 2yq5_A 149 LTVGLIGVGHIGSAVAEIFSAM--GAKVIAYDVAYNP--EFE--------------------PFLTYT-DFDTVLKEADI 203 (343)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCG--GGT--------------------TTCEEC-CHHHHHHHCSE
T ss_pred CeEEEEecCHHHHHHHHHHhhC--CCEEEEECCChhh--hhh--------------------cccccc-CHHHHHhcCCE
Confidence 5899999999999999999987 9999999998643 111 112333 78888999999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhc
Q 017997 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHN 144 (362)
Q Consensus 82 Vii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~ 144 (362)
|++++|......+ -.+ +...+.++++.++|+.|..++-..+.+.+.|++.
T Consensus 204 V~l~~Plt~~t~~-----li~--------~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g 253 (343)
T 2yq5_A 204 VSLHTPLFPSTEN-----MIG--------EKQLKEMKKSAYLINCARGELVDTGALIKALQDG 253 (343)
T ss_dssp EEECCCCCTTTTT-----CBC--------HHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHT
T ss_pred EEEcCCCCHHHHH-----Hhh--------HHHHhhCCCCcEEEECCCChhhhHHHHHHHHHcC
Confidence 9999985322111 111 3445678999999999998777788888888764
No 131
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=98.89 E-value=1.5e-08 Score=94.52 Aligned_cols=121 Identities=19% Similarity=0.256 Sum_probs=79.6
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcE
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (362)
|||+|||+|++|.++|..|+..+...+|.++|+++++++..... +.+.. ......++++.+..+++++||+
T Consensus 7 ~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~d--------l~~~~-~~~~~~~~v~~~~~~a~~~aDv 77 (317)
T 3d0o_A 7 NKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMD--------LKHAT-PYSPTTVRVKAGEYSDCHDADL 77 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHH--------HHHHG-GGSSSCCEEEECCGGGGTTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhh--------HHhhh-hhcCCCeEEEeCCHHHhCCCCE
Confidence 59999999999999999999882125999999999877642110 11110 0111223333344567999999
Q ss_pred EEEeccCCCCCCCCCCCC----CCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHH
Q 017997 82 VFVSVNTPTKTQGLGAGK----AADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEA 136 (362)
Q Consensus 82 Vii~vptp~~~~g~~~~~----~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~ 136 (362)
||++++.|... |. ++ ..+...+++..+.+.++ .++.+|++ .|.|+++.-.
T Consensus 78 Vvi~ag~~~~~-g~--~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv-~tNPv~~~t~ 131 (317)
T 3d0o_A 78 VVICAGAAQKP-GE--TRLDLVSKNLKIFKSIVGEVMAS-KFDGIFLV-ATNPVDILAY 131 (317)
T ss_dssp EEECCCCCCCT-TC--CHHHHHHHHHHHHHHHHHHHHHT-TCCSEEEE-CSSSHHHHHH
T ss_pred EEECCCCCCCC-CC--cHHHHHHHHHHHHHHHHHHHHHh-CCCcEEEE-ecCcHHHHHH
Confidence 99999988643 10 10 12335667777888887 46777766 6788887544
No 132
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=98.87 E-value=1.7e-08 Score=94.31 Aligned_cols=118 Identities=21% Similarity=0.324 Sum_probs=78.9
Q ss_pred CceEEEEcCChhHHHHHHHHHHcCCCC-eEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhh-cCCCEEEecCHHhhhcC
Q 017997 1 MVKICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQC-RGKNLFFSTDVEKHVSE 78 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~la~~~~G~-~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~-~~~~l~~t~d~~~a~~~ 78 (362)
+|||+|||+|.||.++|..|+.. |+ +|+++|+++++++.... .+.+..... ...++.+++|+ +++++
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~--~~~~v~L~Di~~~~~~g~~~--------dl~~~~~~~~~~~~v~~t~d~-~a~~~ 75 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLK--ELGDVVLFDIAEGTPQGKGL--------DIAESSPVDGFDAKFTGANDY-AAIEG 75 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCCEEEEECSSSSHHHHHHH--------HHHHHHHHHTCCCCEEEESSG-GGGTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCCeEEEEeCCchhHHHHHH--------HHhchhhhcCCCCEEEEeCCH-HHHCC
Confidence 36999999999999999999998 78 99999999988763321 011110000 13457778888 56999
Q ss_pred CcEEEEeccCCCCCCCCCCCC----CCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccH
Q 017997 79 ADIVFVSVNTPTKTQGLGAGK----AADLTYWESAARVIADVSKSDKIVVEKSTVPVKTA 134 (362)
Q Consensus 79 aDvVii~vptp~~~~g~~~~~----~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~ 134 (362)
||+||++.+.|... |. ++ ..+...+++..+.+.++. ++.++++-| .|..+.
T Consensus 76 aDiVIiaag~p~k~-G~--~R~dl~~~N~~i~~~i~~~i~~~~-p~a~iivvt-NPvd~~ 130 (324)
T 3gvi_A 76 ADVVIVTAGVPRKP-GM--SRDDLLGINLKVMEQVGAGIKKYA-PEAFVICIT-NPLDAM 130 (324)
T ss_dssp CSEEEECCSCCCC--------CHHHHHHHHHHHHHHHHHHHHC-TTCEEEECC-SSHHHH
T ss_pred CCEEEEccCcCCCC-CC--CHHHHHHhhHHHHHHHHHHHHHHC-CCeEEEecC-CCcHHH
Confidence 99999999887643 21 11 113355667777777776 566665533 565543
No 133
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=98.85 E-value=6.5e-09 Score=97.67 Aligned_cols=106 Identities=16% Similarity=0.195 Sum_probs=78.0
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcE
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (362)
++|+|||+|.||..+|..+... |++|++||+++++. +.+. ..+.++++++++.||+
T Consensus 147 ~~vgIiG~G~IG~~~A~~l~~~--G~~V~~~d~~~~~~--~~~~--------------------~~~~~~l~ell~~aDv 202 (333)
T 1j4a_A 147 QVVGVVGTGHIGQVFMQIMEGF--GAKVITYDIFRNPE--LEKK--------------------GYYVDSLDDLYKQADV 202 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCHH--HHHT--------------------TCBCSCHHHHHHHCSE
T ss_pred CEEEEEccCHHHHHHHHHHHHC--CCEEEEECCCcchh--HHhh--------------------CeecCCHHHHHhhCCE
Confidence 5899999999999999999987 99999999987553 2211 1123467777899999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhc
Q 017997 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHN 144 (362)
Q Consensus 82 Vii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~ 144 (362)
|++++|..... ..+. -+...+.++++.++|+.|+.++-..+.+.+.+++.
T Consensus 203 V~l~~p~~~~t-----------~~li--~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~g 252 (333)
T 1j4a_A 203 ISLHVPDVPAN-----------VHMI--NDESIAKMKQDVVIVNVSRGPLVDTDAVIRGLDSG 252 (333)
T ss_dssp EEECSCCCGGG-----------TTCB--SHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHT
T ss_pred EEEcCCCcHHH-----------HHHH--hHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhC
Confidence 99999853221 1111 02345668999999999987777777888888764
No 134
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=98.84 E-value=1.9e-08 Score=81.55 Aligned_cols=127 Identities=14% Similarity=0.240 Sum_probs=78.1
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcC-CCCCCCCChHHHHhhhcCCCEEEecCH---H-hhh
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSD-QLPIYEPGLDGVVKQCRGKNLFFSTDV---E-KHV 76 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~-~~~~~e~~l~~~~~~~~~~~l~~t~d~---~-~a~ 76 (362)
|+|.|+|+|.+|..+|..|.+. |++|+++|+++++++.+.+. ........ .++. . ..+
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~--g~~v~~~d~~~~~~~~~~~~~~~~~~~~d---------------~~~~~~l~~~~~ 67 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEK--GHDIVLIDIDKDICKKASAEIDALVINGD---------------CTKIKTLEDAGI 67 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHCSSEEEESC---------------TTSHHHHHHTTT
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHHhcCcEEEEcC---------------CCCHHHHHHcCc
Confidence 7999999999999999999998 99999999999999887642 11110000 0111 1 125
Q ss_pred cCCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhccCCCceEEeeCC
Q 017997 77 SEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNP 156 (362)
Q Consensus 77 ~~aDvVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~P 156 (362)
.++|+||+|+|.+. ....+..+.+.++++.+|+. + ..+...+ .+++. |. ..+.+|
T Consensus 68 ~~~d~vi~~~~~~~---------------~~~~~~~~~~~~~~~~ii~~-~-~~~~~~~----~l~~~--g~--~~v~~p 122 (140)
T 1lss_A 68 EDADMYIAVTGKEE---------------VNLMSSLLAKSYGINKTIAR-I-SEIEYKD----VFERL--GV--DVVVSP 122 (140)
T ss_dssp TTCSEEEECCSCHH---------------HHHHHHHHHHHTTCCCEEEE-C-SSTTHHH----HHHHT--TC--SEEECH
T ss_pred ccCCEEEEeeCCch---------------HHHHHHHHHHHcCCCEEEEE-e-cCHhHHH----HHHHc--CC--CEEECH
Confidence 78999999976421 12233445555676776653 2 2333333 23332 32 345788
Q ss_pred cccccCccccccCC
Q 017997 157 EFLAEGTAIQDLFN 170 (362)
Q Consensus 157 e~~~~g~a~~~~~~ 170 (362)
++...+.....+.+
T Consensus 123 ~~~~~~~~~~~~~~ 136 (140)
T 1lss_A 123 ELIAANYIEKLIER 136 (140)
T ss_dssp HHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhcc
Confidence 77665554444333
No 135
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=98.84 E-value=2.2e-08 Score=93.52 Aligned_cols=111 Identities=22% Similarity=0.300 Sum_probs=76.4
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCC--eEEEEeCCHHHHHH----HHcCCCCCCCCChHHHHhhhcCCCEE-EecCHHh
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSI--EVAVVDISVSRINA----WNSDQLPIYEPGLDGVVKQCRGKNLF-FSTDVEK 74 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~--~V~~~d~~~~~~~~----l~~~~~~~~e~~l~~~~~~~~~~~l~-~t~d~~~ 74 (362)
|||+|||+|+||.++|..|+.. |+ +|+++|+++++++. |+.+ .++.. ..++ .++++ +
T Consensus 6 ~kI~ViGaG~vG~~~a~~l~~~--~~~~~l~l~D~~~~k~~g~a~DL~~~-~~~~~------------~~v~i~~~~~-~ 69 (326)
T 3pqe_A 6 NKVALIGAGFVGSSYAFALINQ--GITDELVVIDVNKEKAMGDVMDLNHG-KAFAP------------QPVKTSYGTY-E 69 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCCSEEEEECSCHHHHHHHHHHHHHT-GGGSS------------SCCEEEEECG-G
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCceEEEEecchHHHHHHHHHHHhc-ccccc------------CCeEEEeCcH-H
Confidence 6999999999999999999998 66 99999999998876 5554 33321 1222 34455 4
Q ss_pred hhcCCcEEEEeccCCCCCCCCCCCCCC-----ChHHHHHHHHHHHhhcCCCCEEEEeeCCccccH
Q 017997 75 HVSEADIVFVSVNTPTKTQGLGAGKAA-----DLTYWESAARVIADVSKSDKIVVEKSTVPVKTA 134 (362)
Q Consensus 75 a~~~aDvVii~vptp~~~~g~~~~~~~-----d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~ 134 (362)
++++||+||++.++|... |. + .. +...+++..+.+.++. ++.++++- |.|..+.
T Consensus 70 a~~~aDvVvi~ag~p~kp-G~--~-R~dL~~~N~~Iv~~i~~~I~~~~-p~a~vlvv-tNPvd~~ 128 (326)
T 3pqe_A 70 DCKDADIVCICAGANQKP-GE--T-RLELVEKNLKIFKGIVSEVMASG-FDGIFLVA-TNPVDIL 128 (326)
T ss_dssp GGTTCSEEEECCSCCCCT-TC--C-HHHHHHHHHHHHHHHHHHHHHTT-CCSEEEEC-SSSHHHH
T ss_pred HhCCCCEEEEecccCCCC-Cc--c-HHHHHHHHHHHHHHHHHHHHHhc-CCeEEEEc-CChHHHH
Confidence 699999999999987644 10 1 12 2244566667777765 45665543 4566553
No 136
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=98.84 E-value=7.9e-09 Score=96.13 Aligned_cols=100 Identities=16% Similarity=0.145 Sum_probs=74.6
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcE
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (362)
++|+|||+|.||..+|..+... |++|++||+++++.+ .. ..+++++++.+|+
T Consensus 145 ~~vgIIG~G~IG~~~A~~l~~~--G~~V~~~d~~~~~~~-------------------------~~-~~~l~ell~~aDv 196 (311)
T 2cuk_A 145 LTLGLVGMGRIGQAVAKRALAF--GMRVVYHARTPKPLP-------------------------YP-FLSLEELLKEADV 196 (311)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCSSS-------------------------SC-BCCHHHHHHHCSE
T ss_pred CEEEEEEECHHHHHHHHHHHHC--CCEEEEECCCCcccc-------------------------cc-cCCHHHHHhhCCE
Confidence 5899999999999999999988 999999999754321 01 2456777899999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHH
Q 017997 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILT 142 (362)
Q Consensus 82 Vii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~ 142 (362)
|++++|..... ..+.. +...+.++++.++|+.|+..+-..+.+.+.++
T Consensus 197 V~l~~p~~~~t-----------~~li~--~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~ 244 (311)
T 2cuk_A 197 VSLHTPLTPET-----------HRLLN--RERLFAMKRGAILLNTARGALVDTEALVEALR 244 (311)
T ss_dssp EEECCCCCTTT-----------TTCBC--HHHHTTSCTTCEEEECSCGGGBCHHHHHHHHT
T ss_pred EEEeCCCChHH-----------HhhcC--HHHHhhCCCCcEEEECCCCCccCHHHHHHHHh
Confidence 99999854221 11111 23456789999999999876666677877776
No 137
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=98.80 E-value=4e-08 Score=91.67 Aligned_cols=120 Identities=15% Similarity=0.153 Sum_probs=80.8
Q ss_pred CceEEEEcCChhHHHHHHHHHHcCCCC--eEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcC
Q 017997 1 MVKICCIGAGYVGGPTMAVIALKCPSI--EVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSE 78 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~la~~~~G~--~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~ 78 (362)
+|||+|||+|.||.++|..|+.+ |+ +|+++|+++++++..... +.+........++..++|+++ +++
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~~--g~~~ev~L~Di~~~~~~g~a~D--------L~~~~~~~~~~~i~~t~d~~~-~~d 89 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLMK--DLADEVALVDVMEDKLKGEMMD--------LEHGSLFLHTAKIVSGKDYSV-SAG 89 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHHH--CCCSEEEEECSCHHHHHHHHHH--------HHHHGGGSCCSEEEEESSSCS-CSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCCCeEEEEECCHHHHHHHHHH--------hhhhhhcccCCeEEEcCCHHH-hCC
Confidence 37999999999999999999998 66 999999999887753210 011000001245777889876 999
Q ss_pred CcEEEEeccCCCCCCCCCCC--CCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccH
Q 017997 79 ADIVFVSVNTPTKTQGLGAG--KAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTA 134 (362)
Q Consensus 79 aDvVii~vptp~~~~g~~~~--~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~ 134 (362)
||+||++.+.|..+ |+... -..+.+.+++..+.+.++ .++.++++-| .|..+.
T Consensus 90 aDiVIitaG~p~kp-G~tR~dll~~N~~I~k~i~~~I~k~-~P~a~ilvvt-NPvdi~ 144 (330)
T 3ldh_A 90 SKLVVITAGARQQE-GESRLNLVQRNVNIFKFIIPNIVKH-SPDCLKELHP-ELGTDK 144 (330)
T ss_dssp CSEEEECCSCCCCS-SCCTTGGGHHHHHHHHHHHHHHHHH-CTTCEEEECS-SSHHHH
T ss_pred CCEEEEeCCCCCCC-CCCHHHHHHhhHHHHHHHHHHHHhh-CCCceEEeCC-CccHHH
Confidence 99999999988643 21100 012234566777888888 5666665533 565554
No 138
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=98.77 E-value=6.4e-08 Score=90.27 Aligned_cols=118 Identities=21% Similarity=0.316 Sum_probs=79.3
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCC-eEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhh-hcCCCEEEecCHHhhhcCC
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQ-CRGKNLFFSTDVEKHVSEA 79 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~-~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~-~~~~~l~~t~d~~~a~~~a 79 (362)
|||+|||+|.||.++|..|+.. |+ +|+++|+++++++..... +.+.... ....+++.++|++ ++++|
T Consensus 6 ~kI~iiGaG~vG~~~a~~l~~~--~~~~v~l~Di~~~~~~g~a~d--------L~~~~~~~~~~~~v~~t~d~~-a~~~a 74 (321)
T 3p7m_A 6 KKITLVGAGNIGGTLAHLALIK--QLGDVVLFDIAQGMPNGKALD--------LLQTCPIEGVDFKVRGTNDYK-DLENS 74 (321)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCCEEEEECSSSSHHHHHHHH--------HHTTHHHHTCCCCEEEESCGG-GGTTC
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCceEEEEeCChHHHHHHHHH--------HHhhhhhcCCCcEEEEcCCHH-HHCCC
Confidence 7999999999999999999998 66 999999999887633210 1110000 0123566677864 69999
Q ss_pred cEEEEeccCCCCCCCCCCCC----CCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHH
Q 017997 80 DIVFVSVNTPTKTQGLGAGK----AADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAE 135 (362)
Q Consensus 80 DvVii~vptp~~~~g~~~~~----~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~ 135 (362)
|+||++.+.|... |. ++ ..+...+++..+.+.++. ++.++++- |.|.++.-
T Consensus 75 DvVIi~ag~p~k~-G~--~R~dl~~~N~~i~~~i~~~i~~~~-p~a~vivv-tNPvd~~t 129 (321)
T 3p7m_A 75 DVVIVTAGVPRKP-GM--SRDDLLGINIKVMQTVGEGIKHNC-PNAFVICI-TNPLDIMV 129 (321)
T ss_dssp SEEEECCSCCCCT-TC--CHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEC-CSSHHHHH
T ss_pred CEEEEcCCcCCCC-CC--CHHHHHHHhHHHHHHHHHHHHHHC-CCcEEEEe-cCchHHHH
Confidence 9999999887543 21 11 113455677777888876 56666554 56766543
No 139
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=98.76 E-value=8.9e-08 Score=89.06 Aligned_cols=117 Identities=26% Similarity=0.383 Sum_probs=77.6
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCC-eEEEEeCC--HHHHHHHHcCCCCCCCCChHHHHhhh-cCCCEEEecCHHhhhc
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSI-EVAVVDIS--VSRINAWNSDQLPIYEPGLDGVVKQC-RGKNLFFSTDVEKHVS 77 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~-~V~~~d~~--~~~~~~l~~~~~~~~e~~l~~~~~~~-~~~~l~~t~d~~~a~~ 77 (362)
+||+|||+|.||.++|..|+.. |+ +|+++|++ +++.+..... +.+..... ...+++.+++++ +++
T Consensus 9 ~kv~ViGaG~vG~~ia~~l~~~--g~~~v~l~D~~~~~~~~~g~a~d--------l~~~~~~~~~~~~i~~t~d~~-a~~ 77 (315)
T 3tl2_A 9 KKVSVIGAGFTGATTAFLLAQK--ELADVVLVDIPQLENPTKGKALD--------MLEASPVQGFDANIIGTSDYA-DTA 77 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCCEEEEECCGGGHHHHHHHHHH--------HHHHHHHHTCCCCEEEESCGG-GGT
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCeEEEEeccchHHHHHHhhhh--------HHHhhhhccCCCEEEEcCCHH-HhC
Confidence 4899999999999999999998 88 99999999 6666544311 11111000 234678788875 599
Q ss_pred CCcEEEEeccCCCCCCCCCCCC----CCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccH
Q 017997 78 EADIVFVSVNTPTKTQGLGAGK----AADLTYWESAARVIADVSKSDKIVVEKSTVPVKTA 134 (362)
Q Consensus 78 ~aDvVii~vptp~~~~g~~~~~----~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~ 134 (362)
+||+||++.++|..+ |. ++ ..+...+++..+.+.++. ++.++++-| .|..+.
T Consensus 78 ~aDvVIiaag~p~kp-g~--~R~dl~~~N~~i~~~i~~~i~~~~-p~a~vlvvs-NPvd~~ 133 (315)
T 3tl2_A 78 DSDVVVITAGIARKP-GM--SRDDLVATNSKIMKSITRDIAKHS-PNAIIVVLT-NPVDAM 133 (315)
T ss_dssp TCSEEEECCSCCCCT-TC--CHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECC-SSHHHH
T ss_pred CCCEEEEeCCCCCCC-CC--CHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEECC-ChHHHH
Confidence 999999999988644 21 11 112234566667777775 556665533 455543
No 140
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=98.76 E-value=6.4e-08 Score=90.15 Aligned_cols=112 Identities=18% Similarity=0.256 Sum_probs=79.6
Q ss_pred ceEEEEcC-ChhHHHHHHHHHHcCCC--CeEEEEeCCHHHHH--HHHcCCCCCCCCChHHHHhhhcCCCEEE---ecCHH
Q 017997 2 VKICCIGA-GYVGGPTMAVIALKCPS--IEVAVVDISVSRIN--AWNSDQLPIYEPGLDGVVKQCRGKNLFF---STDVE 73 (362)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~la~~~~G--~~V~~~d~~~~~~~--~l~~~~~~~~e~~l~~~~~~~~~~~l~~---t~d~~ 73 (362)
|||+|||+ |++|.+++..|+.. | ++|+++|+++..-. .|.... ...+++. ++|++
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~--~~~~ev~L~Di~~~~~~a~dL~~~~---------------~~~~l~~~~~t~d~~ 63 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNS--PLVSRLTLYDIAHTPGVAADLSHIE---------------TRATVKGYLGPEQLP 63 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTC--TTCSEEEEEESSSHHHHHHHHTTSS---------------SSCEEEEEESGGGHH
T ss_pred CEEEEECCCChHHHHHHHHHHhC--CCCcEEEEEeCCccHHHHHHHhccC---------------cCceEEEecCCCCHH
Confidence 79999998 99999999999987 6 79999999872221 222211 0123565 36788
Q ss_pred hhhcCCcEEEEeccCCCCCCCCCCCCCCCh-----HHHHHHHHHHHhhcCCCCEEEEeeCCccccHHH
Q 017997 74 KHVSEADIVFVSVNTPTKTQGLGAGKAADL-----TYWESAARVIADVSKSDKIVVEKSTVPVKTAEA 136 (362)
Q Consensus 74 ~a~~~aDvVii~vptp~~~~g~~~~~~~d~-----~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~ 136 (362)
+++++||+||++.+.|... | ....|+ ..++++.+.+.++. ++.++++ .|.|.++.-.
T Consensus 64 ~a~~~aDvVvi~ag~~~~~-g---~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~viv-~sNPv~~~~~ 125 (314)
T 1mld_A 64 DCLKGCDVVVIPAGVPRKP-G---MTRDDLFNTNATIVATLTAACAQHC-PDAMICI-ISNPVNSTIP 125 (314)
T ss_dssp HHHTTCSEEEECCSCCCCT-T---CCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEE-CSSCHHHHHH
T ss_pred HHhCCCCEEEECCCcCCCC-C---CcHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEE-ECCCcchhHH
Confidence 8899999999999887643 1 112455 66778888888876 5556555 4778887653
No 141
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=98.73 E-value=1e-08 Score=95.57 Aligned_cols=106 Identities=11% Similarity=0.137 Sum_probs=76.9
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcE
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (362)
++|+|||+|.||..++..|++..+..+|.+||+++++.+++.+.. ...+..+++++++++++|+
T Consensus 136 ~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr~~~~~~~l~~~~----------------~~~~~~~~~~~e~v~~aDi 199 (312)
T 2i99_A 136 EVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADTV----------------QGEVRVCSSVQEAVAGADV 199 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCCCSEEEEECSSHHHHHHHHHHS----------------SSCCEECSSHHHHHTTCSE
T ss_pred cEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHh----------------hCCeEEeCCHHHHHhcCCE
Confidence 689999999999999999987531349999999999998876521 0025567788888999999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHh
Q 017997 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTH 143 (362)
Q Consensus 82 Vii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~ 143 (362)
|++|+|.. .. ++.. +.++++++|+..|+..|.. +++.+.+.+
T Consensus 200 Vi~atp~~-~~----------------v~~~--~~l~~g~~vi~~g~~~p~~-~el~~~~~~ 241 (312)
T 2i99_A 200 IITVTLAT-EP----------------ILFG--EWVKPGAHINAVGASRPDW-RELDDELMK 241 (312)
T ss_dssp EEECCCCS-SC----------------CBCG--GGSCTTCEEEECCCCSTTC-CSBCHHHHH
T ss_pred EEEEeCCC-Cc----------------ccCH--HHcCCCcEEEeCCCCCCCc-eeccHHHHh
Confidence 99998742 11 1111 4678899999888887776 334333333
No 142
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=98.73 E-value=9.2e-08 Score=89.88 Aligned_cols=116 Identities=19% Similarity=0.255 Sum_probs=76.1
Q ss_pred ceEEEEcC-ChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHH----HHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhh
Q 017997 2 VKICCIGA-GYVGGPTMAVIALKCPSIEVAVVDISVSRINA----WNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHV 76 (362)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~----l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~ 76 (362)
|||+|||+ |++|.++|..++..+...+|+++|+++++++. |+... + ...++++++|+.+++
T Consensus 9 ~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~--~------------~~~~i~~t~d~~~al 74 (343)
T 3fi9_A 9 EKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCG--F------------EGLNLTFTSDIKEAL 74 (343)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHC--C------------TTCCCEEESCHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCc--C------------CCCceEEcCCHHHHh
Confidence 69999998 99999999999988222589999999988775 43321 1 013577888988889
Q ss_pred cCCcEEEEeccCCCCCCCCCCCCCCC-----hHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHH
Q 017997 77 SEADIVFVSVNTPTKTQGLGAGKAAD-----LTYWESAARVIADVSKSDKIVVEKSTVPVKTAEA 136 (362)
Q Consensus 77 ~~aDvVii~vptp~~~~g~~~~~~~d-----~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~ 136 (362)
++||+||++..+|... |. + ..| ...+++..+.+.++.++..+|++ -|.|..+.-.
T Consensus 75 ~dADvVvitaG~p~kp-G~--~-R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlv-vsNPvd~~t~ 134 (343)
T 3fi9_A 75 TDAKYIVSSGGAPRKE-GM--T-REDLLKGNAEIAAQLGKDIKSYCPDCKHVII-IFNPADITGL 134 (343)
T ss_dssp TTEEEEEECCC----------C-HHHHHHHHHHHHHHHHHHHHHHCTTCCEEEE-CSSSHHHHHH
T ss_pred CCCCEEEEccCCCCCC-CC--C-HHHHHHHHHHHHHHHHHHHHHhccCcEEEEE-ecCchHHHHH
Confidence 9999999999887543 10 1 222 24455666777777644432433 2567665443
No 143
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=98.73 E-value=6.6e-08 Score=90.51 Aligned_cols=111 Identities=20% Similarity=0.280 Sum_probs=76.6
Q ss_pred CceEEEEc-CChhHHHHHHHHHHcCCC--CeEEEEeCCHHH--HHHHHcCCCCCCCCChHHHHhhhcCCCEEE---ecCH
Q 017997 1 MVKICCIG-AGYVGGPTMAVIALKCPS--IEVAVVDISVSR--INAWNSDQLPIYEPGLDGVVKQCRGKNLFF---STDV 72 (362)
Q Consensus 1 ~mkI~VIG-lG~~G~~lA~~la~~~~G--~~V~~~d~~~~~--~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~---t~d~ 72 (362)
+|||+|+| +|++|.+++..|+.. | ++|+++|++++. ...+..... ...+.. ++|+
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~~~--g~~~ev~l~Di~~~~~~~~dL~~~~~---------------~~~v~~~~~t~d~ 70 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMKMN--PLVSVLHLYDVVNAPGVTADISHMDT---------------GAVVRGFLGQQQL 70 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHHHC--TTEEEEEEEESSSHHHHHHHHHTSCS---------------SCEEEEEESHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHhC--CCCCEEEEEeCCCcHhHHHHhhcccc---------------cceEEEEeCCCCH
Confidence 37999999 899999999999988 7 899999998762 222332110 113444 5577
Q ss_pred HhhhcCCcEEEEeccCCCCCCCCCCCCCCCh-----HHHHHHHHHHHhhcCCCCEEEEeeCCccccH
Q 017997 73 EKHVSEADIVFVSVNTPTKTQGLGAGKAADL-----TYWESAARVIADVSKSDKIVVEKSTVPVKTA 134 (362)
Q Consensus 73 ~~a~~~aDvVii~vptp~~~~g~~~~~~~d~-----~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~ 134 (362)
.++++++|+||++.+.|... + ....|+ ..+++.++.+.++. ++.+|++ +|.|.+++
T Consensus 71 ~~al~gaDvVi~~ag~~~~~-g---~~r~dl~~~N~~~~~~i~~~i~~~~-p~~~viv-~SNPv~~~ 131 (326)
T 1smk_A 71 EAALTGMDLIIVPAGVPRKP-G---MTRDDLFKINAGIVKTLCEGIAKCC-PRAIVNL-ISNPVNST 131 (326)
T ss_dssp HHHHTTCSEEEECCCCCCCS-S---CCCSHHHHHHHHHHHHHHHHHHHHC-TTSEEEE-CCSSHHHH
T ss_pred HHHcCCCCEEEEcCCcCCCC-C---CCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEE-ECCchHHH
Confidence 78899999999999877543 1 112333 45566666776665 5566655 68898874
No 144
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=98.71 E-value=9.9e-08 Score=93.38 Aligned_cols=124 Identities=20% Similarity=0.237 Sum_probs=79.1
Q ss_pred ceEEEEcCChhH--HHHHHHHHHc--CCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhh-hcCCCEEEecCHHhhh
Q 017997 2 VKICCIGAGYVG--GPTMAVIALK--CPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQ-CRGKNLFFSTDVEKHV 76 (362)
Q Consensus 2 mkI~VIGlG~~G--~~lA~~la~~--~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~-~~~~~l~~t~d~~~a~ 76 (362)
|||+|||+|.|| .++|..|+.. .+|++|++||+++++++.++.. ...++.. ....++++++|+.+++
T Consensus 4 ~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~~e~l~~~~~~--------~~~~l~~~~~~~~I~~ttD~~eal 75 (480)
T 1obb_A 4 VKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTI--------AKKYVEEVGADLKFEKTMNLDDVI 75 (480)
T ss_dssp CEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHH--------HHHHHHHTTCCCEEEEESCHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCCHHHHHHHHHH--------HHHHhccCCCCcEEEEECCHHHHh
Confidence 699999999975 5556677642 1278999999999998876542 1122211 1235688899997789
Q ss_pred cCCcEEEEeccCCCC-----------CCCC----CCCCCC------------ChHHHHHHHHHHHhhcCCCCEEEEeeCC
Q 017997 77 SEADIVFVSVNTPTK-----------TQGL----GAGKAA------------DLTYWESAARVIADVSKSDKIVVEKSTV 129 (362)
Q Consensus 77 ~~aDvVii~vptp~~-----------~~g~----~~~~~~------------d~~~l~~~~~~i~~~l~~~~iVv~~STv 129 (362)
++||+||+++|.+.. ..|. +++-.+ .+..+.++++.|.++. |+.++++ .|.
T Consensus 76 ~dAD~VIiaagv~~~~~~~~dE~ip~K~g~~~~l~dt~g~g~~~~G~~~~~rni~i~~~i~~~i~~~~-P~A~ii~-~TN 153 (480)
T 1obb_A 76 IDADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLS-PKAWYLQ-AAN 153 (480)
T ss_dssp TTCSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHC-TTCEEEE-CSS
T ss_pred CCCCEEEECCCcccccccccccccccccccccchhhhcCCccchhhhHHhhhhHHHHHHHHHHHHHHC-CCeEEEE-eCC
Confidence 999999999975210 0000 000001 1246677778888776 5566543 567
Q ss_pred ccccHH
Q 017997 130 PVKTAE 135 (362)
Q Consensus 130 ~~gt~~ 135 (362)
|.+...
T Consensus 154 Pvdi~t 159 (480)
T 1obb_A 154 PIFEGT 159 (480)
T ss_dssp CHHHHH
T ss_pred cHHHHH
Confidence 776543
No 145
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=98.69 E-value=1.8e-08 Score=94.57 Aligned_cols=105 Identities=13% Similarity=0.139 Sum_probs=77.5
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcE
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (362)
++|+|||+|.||..+|..+... |++|++||++++.. + +. . ..+ .+++++++.||+
T Consensus 146 ~~vgIiG~G~IG~~~A~~l~~~--G~~V~~~d~~~~~~--~-~~------------------~-~~~-~~l~ell~~aDv 200 (333)
T 1dxy_A 146 QTVGVMGTGHIGQVAIKLFKGF--GAKVIAYDPYPMKG--D-HP------------------D-FDY-VSLEDLFKQSDV 200 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCSS--C-CT------------------T-CEE-CCHHHHHHHCSE
T ss_pred CEEEEECcCHHHHHHHHHHHHC--CCEEEEECCCcchh--h-Hh------------------c-ccc-CCHHHHHhcCCE
Confidence 5899999999999999999987 99999999975321 0 00 1 222 367788899999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhc
Q 017997 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHN 144 (362)
Q Consensus 82 Vii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~ 144 (362)
|++|+|..... ..+. -+...+.++++.++|+.|+.++-..+.+.+.+++.
T Consensus 201 V~~~~P~~~~t-----------~~li--~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~g 250 (333)
T 1dxy_A 201 IDLHVPGIEQN-----------THII--NEAAFNLMKPGAIVINTARPNLIDTQAMLSNLKSG 250 (333)
T ss_dssp EEECCCCCGGG-----------TTSB--CHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHHTT
T ss_pred EEEcCCCchhH-----------HHHh--CHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhC
Confidence 99999854321 1111 13455678999999999998777778888878764
No 146
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=98.67 E-value=2.8e-08 Score=94.29 Aligned_cols=108 Identities=17% Similarity=0.153 Sum_probs=77.7
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcE
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (362)
++|||||+|.||..+|..+... |++|++||++.+..+ . + . ...++++++++||+
T Consensus 120 ktvGIIGlG~IG~~vA~~l~a~--G~~V~~~d~~~~~~~---~-------------------~-~-~~~sl~ell~~aDi 173 (381)
T 3oet_A 120 RTIGIVGVGNVGSRLQTRLEAL--GIRTLLCDPPRAARG---D-------------------E-G-DFRTLDELVQEADV 173 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECHHHHHTT---C-------------------C-S-CBCCHHHHHHHCSE
T ss_pred CEEEEEeECHHHHHHHHHHHHC--CCEEEEECCChHHhc---c-------------------C-c-ccCCHHHHHhhCCE
Confidence 5899999999999999999988 999999998543211 0 0 1 12467888999999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhc
Q 017997 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHN 144 (362)
Q Consensus 82 Vii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~ 144 (362)
|++++|.... | ...+..+. -+.....++++.++|+.|.-++-..+.+.+.+++.
T Consensus 174 V~l~~Plt~~--g-----~~~T~~li--~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g 227 (381)
T 3oet_A 174 LTFHTPLYKD--G-----PYKTLHLA--DETLIRRLKPGAILINACRGPVVDNAALLARLNAG 227 (381)
T ss_dssp EEECCCCCCS--S-----TTCCTTSB--CHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTT
T ss_pred EEEcCcCCcc--c-----cccchhhc--CHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhC
Confidence 9999985432 0 00011111 13455668999999999998877788888878764
No 147
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=98.67 E-value=2.3e-08 Score=93.78 Aligned_cols=105 Identities=12% Similarity=0.129 Sum_probs=77.3
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcE
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (362)
++|+|||+|.||..+|..+... |++|++||++++.. +.+ . ..+ .++++++++||+
T Consensus 147 ~~vgIiG~G~IG~~~A~~l~~~--G~~V~~~d~~~~~~--~~~-------------------~-~~~-~~l~ell~~aDv 201 (331)
T 1xdw_A 147 CTVGVVGLGRIGRVAAQIFHGM--GATVIGEDVFEIKG--IED-------------------Y-CTQ-VSLDEVLEKSDI 201 (331)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCCS--CTT-------------------T-CEE-CCHHHHHHHCSE
T ss_pred CEEEEECcCHHHHHHHHHHHHC--CCEEEEECCCccHH--HHh-------------------c-ccc-CCHHHHHhhCCE
Confidence 5899999999999999999987 99999999975321 100 1 222 367788899999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhc
Q 017997 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHN 144 (362)
Q Consensus 82 Vii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~ 144 (362)
|++++|......+ -.+ +...+.++++.++|+.|+.++-..+.+.+.+++.
T Consensus 202 V~~~~p~t~~t~~-----li~--------~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~~g 251 (331)
T 1xdw_A 202 ITIHAPYIKENGA-----VVT--------RDFLKKMKDGAILVNCARGQLVDTEAVIEAVESG 251 (331)
T ss_dssp EEECCCCCTTTCC-----SBC--------HHHHHTSCTTEEEEECSCGGGBCHHHHHHHHHHT
T ss_pred EEEecCCchHHHH-----HhC--------HHHHhhCCCCcEEEECCCcccccHHHHHHHHHhC
Confidence 9999885322111 111 3455678999999999987777778888878764
No 148
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=98.66 E-value=2e-07 Score=86.83 Aligned_cols=117 Identities=23% Similarity=0.299 Sum_probs=74.9
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCC--eEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCC
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSI--EVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEA 79 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~--~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~a 79 (362)
|||+|||+|++|.+++..|+.. ++ ++.++|+++++++..... +.+... .....+++.+..+++++|
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~--~~~~el~L~Di~~~~~~g~~~d--------l~~~~~--~~~~~~v~~~~~~a~~~a 73 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQ--GIAEEFVIVDVVKDRTKGDALD--------LEDAQA--FTAPKKIYSGEYSDCKDA 73 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCCSEEEEECSSHHHHHHHHHH--------HHGGGG--GSCCCEEEECCGGGGTTC
T ss_pred CEEEEECCCHHHHHHHHHHHcC--CCCCEEEEEeCCchHHHHHHHH--------HHHHHH--hcCCeEEEECCHHHhCCC
Confidence 6999999999999999999988 55 899999999888743221 000000 012334444445669999
Q ss_pred cEEEEeccCCCCCCCCCCCCCCCh-----HHHHHHHHHHHhhcCCCCEEEEeeCCccccHHH
Q 017997 80 DIVFVSVNTPTKTQGLGAGKAADL-----TYWESAARVIADVSKSDKIVVEKSTVPVKTAEA 136 (362)
Q Consensus 80 DvVii~vptp~~~~g~~~~~~~d~-----~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~ 136 (362)
|+||++.+.|... |. + ..|+ ..+++..+.+.++. ++.+|++- |.|.++.-.
T Consensus 74 DvVii~ag~~~~~-g~--~-R~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~-tNPv~~~t~ 129 (318)
T 1ez4_A 74 DLVVITAGAPQKP-GE--S-RLDLVNKNLNILSSIVKPVVDSG-FDGIFLVA-ANPVDILTY 129 (318)
T ss_dssp SEEEECCCC--------------CHHHHHHHHHHHHHHHHHTT-CCSEEEEC-SSSHHHHHH
T ss_pred CEEEECCCCCCCC-CC--C-HHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEe-CCcHHHHHH
Confidence 9999999877543 21 1 2233 55677777777774 66666653 778776543
No 149
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=98.65 E-value=3.9e-08 Score=93.55 Aligned_cols=108 Identities=19% Similarity=0.195 Sum_probs=78.1
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcE
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (362)
++|+|||+|.||..+|..|... |++|++||++++.. ..+ .. ..++++++++||+
T Consensus 117 ~tvGIIGlG~IG~~vA~~l~~~--G~~V~~~d~~~~~~---~~g--------------------~~-~~~l~ell~~aDv 170 (380)
T 2o4c_A 117 RTYGVVGAGQVGGRLVEVLRGL--GWKVLVCDPPRQAR---EPD--------------------GE-FVSLERLLAEADV 170 (380)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECHHHHHH---STT--------------------SC-CCCHHHHHHHCSE
T ss_pred CEEEEEeCCHHHHHHHHHHHHC--CCEEEEEcCChhhh---ccC--------------------cc-cCCHHHHHHhCCE
Confidence 5899999999999999999988 99999999876432 111 01 2467788899999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhc
Q 017997 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHN 144 (362)
Q Consensus 82 Vii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~ 144 (362)
|++++|.... | ...+..+.. +...+.++++.++|+.|+.++-..+.+.+.+++.
T Consensus 171 V~l~~Plt~~--g-----~~~T~~li~--~~~l~~mk~gailIN~sRG~vvd~~aL~~aL~~g 224 (380)
T 2o4c_A 171 ISLHTPLNRD--G-----EHPTRHLLD--EPRLAALRPGTWLVNASRGAVVDNQALRRLLEGG 224 (380)
T ss_dssp EEECCCCCSS--S-----SSCCTTSBC--HHHHHTSCTTEEEEECSCGGGBCHHHHHHHHHTT
T ss_pred EEEeccCccc--c-----ccchhhhcC--HHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhC
Confidence 9999885432 0 000111111 3456778999999999998777778888777764
No 150
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=98.64 E-value=1.4e-07 Score=87.54 Aligned_cols=118 Identities=18% Similarity=0.276 Sum_probs=72.8
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCC--eEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhh-cCCCEEEecCHHhhhcC
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSI--EVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQC-RGKNLFFSTDVEKHVSE 78 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~--~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~-~~~~l~~t~d~~~a~~~ 78 (362)
|||+|||+|.||.++|..|+.. |+ +|+++|+++++++.... ++.+..... ...++..++++ +++++
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~--~~~~el~l~D~~~~k~~g~a~--------DL~~~~~~~~~~~~v~~~~~~-~a~~~ 69 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQ--DVAKEVVMVDIKDGMPQGKAL--------DMRESSPIHGFDTRVTGTNDY-GPTED 69 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCSSEEEEECSSTTHHHHHHH--------HHHHHHHHHTCCCEEEEESSS-GGGTT
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCCEEEEEeCchHHHHHHHH--------HHhccccccCCCcEEEECCCH-HHhCC
Confidence 8999999999999999999988 65 99999999987664321 011110000 11234445555 45999
Q ss_pred CcEEEEeccCCCCCCCCCCCC----CCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHH
Q 017997 79 ADIVFVSVNTPTKTQGLGAGK----AADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAE 135 (362)
Q Consensus 79 aDvVii~vptp~~~~g~~~~~----~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~ 135 (362)
||+||++.+.|..+ |+ ++ ..+...+++..+.+.++. ++.++++- |.|..+.-
T Consensus 70 aDvVii~ag~~~kp-G~--~R~dl~~~N~~i~~~i~~~i~~~~-p~a~vivv-tNPvd~~t 125 (314)
T 3nep_X 70 SDVCIITAGLPRSP-GM--SRDDLLAKNTEIVGGVTEQFVEGS-PDSTIIVV-ANPLDVMT 125 (314)
T ss_dssp CSEEEECCCC----------CHHHHHHHHHHHHHHHHHHHTTC-TTCEEEEC-CSSHHHHH
T ss_pred CCEEEECCCCCCCC-CC--CHHHHHHhhHHHHHHHHHHHHHhC-CCcEEEec-CCchhHHH
Confidence 99999999887543 21 11 112344566667777764 55666553 35666543
No 151
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=98.64 E-value=5.4e-07 Score=83.94 Aligned_cols=121 Identities=17% Similarity=0.203 Sum_probs=75.7
Q ss_pred CceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCc
Q 017997 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (362)
+|||+|||+|.||.++|..++..+...+|+++|+++++.+....+ +.+... ......+.+++..+++++||
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~d--------l~~~~~-~~~~~~~i~~~~~~al~~aD 76 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMD--------FNHGKV-FAPKPVDIWHGDYDDCRDAD 76 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHH--------HHHHTT-SSSSCCEEEECCGGGTTTCS
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhh--------HHHHhh-hcCCCeEEEcCcHHHhCCCC
Confidence 369999999999999999999872224899999998866643221 111000 01112333334445699999
Q ss_pred EEEEeccCCCCCCCCCCCCCCC-----hHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHH
Q 017997 81 IVFVSVNTPTKTQGLGAGKAAD-----LTYWESAARVIADVSKSDKIVVEKSTVPVKTAEA 136 (362)
Q Consensus 81 vVii~vptp~~~~g~~~~~~~d-----~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~ 136 (362)
+||+|.|.|... |. + ..| .+.+.+..+.+.++. ++.++++- |.|.+..-.
T Consensus 77 vViia~~~~~~~-g~--~-r~dl~~~n~~i~~~i~~~i~~~~-p~a~~iv~-tNPv~~~~~ 131 (316)
T 1ldn_A 77 LVVICAGANQKP-GE--T-RLDLVDKNIAIFRSIVESVMASG-FQGLFLVA-TNPVDILTY 131 (316)
T ss_dssp EEEECCSCCCCT-TT--C-SGGGHHHHHHHHHHHHHHHHHHT-CCSEEEEC-SSSHHHHHH
T ss_pred EEEEcCCCCCCC-CC--C-HHHHHHcChHHHHHHHHHHHHHC-CCCEEEEe-CCchHHHHH
Confidence 999999877543 21 1 122 244566667777775 56665553 567665443
No 152
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=98.63 E-value=1.8e-07 Score=91.46 Aligned_cols=122 Identities=11% Similarity=0.094 Sum_probs=79.5
Q ss_pred ceEEEEcCChh-HHHHHHHHHHc--CC-CCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhh-hcCCCEEEecCHHhhh
Q 017997 2 VKICCIGAGYV-GGPTMAVIALK--CP-SIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQ-CRGKNLFFSTDVEKHV 76 (362)
Q Consensus 2 mkI~VIGlG~~-G~~lA~~la~~--~~-G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~-~~~~~l~~t~d~~~a~ 76 (362)
|||+|||+|.+ |.++|..|+.+ .. +++|++||+++++++.++.-. +.++.. ....+++.++|+.+++
T Consensus 29 ~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~~~~~--------~~~l~~~~~~~~I~~t~D~~eal 100 (472)
T 1u8x_X 29 FSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGAC--------DVFIREKAPDIEFAATTDPEEAF 100 (472)
T ss_dssp EEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHH--------HHHHHHHCTTSEEEEESCHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHHHHHH--------HHHhccCCCCCEEEEECCHHHHH
Confidence 39999999999 55577777775 32 679999999999988764310 111111 1234688889998889
Q ss_pred cCCcEEEEeccCCCCCCCCCC---------CCCCC-------------hHHHHHHHHHHHhhcCCCCEEEEeeCCccccH
Q 017997 77 SEADIVFVSVNTPTKTQGLGA---------GKAAD-------------LTYWESAARVIADVSKSDKIVVEKSTVPVKTA 134 (362)
Q Consensus 77 ~~aDvVii~vptp~~~~g~~~---------~~~~d-------------~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~ 134 (362)
++||+||+++|++....- .. -...| +..+.++++.|.++. |+.++++ .|.|.+..
T Consensus 101 ~~AD~VViaag~~~~~g~-~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~~-P~A~ii~-~TNPvdi~ 177 (472)
T 1u8x_X 101 TDVDFVMAHIRVGKYAMR-ALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYS-PDAWMLN-YSNPAAIV 177 (472)
T ss_dssp SSCSEEEECCCTTHHHHH-HHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEE-CCSCHHHH
T ss_pred cCCCEEEEcCCCcccccc-chhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHHC-CCeEEEE-eCCcHHHH
Confidence 999999999987532100 00 00001 124567777777776 5666654 56777754
No 153
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=98.63 E-value=5.3e-07 Score=83.70 Aligned_cols=120 Identities=17% Similarity=0.223 Sum_probs=77.3
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcE
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (362)
|||+|||+|++|.+++..|+..+...++.++|+++++++...... .+.......-+++. ++ .+++++||+
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl--------~~~~~~~~~~~v~~-~~-~~a~~~aD~ 70 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDI--------LHATPFAHPVWVWA-GS-YGDLEGARA 70 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHH--------HTTGGGSCCCEEEE-CC-GGGGTTEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHH--------HHhHhhcCCeEEEE-CC-HHHhCCCCE
Confidence 799999999999999999998733369999999998877432110 00000000112333 34 456999999
Q ss_pred EEEeccCCCCCCCCCCCCCCC-----hHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHH
Q 017997 82 VFVSVNTPTKTQGLGAGKAAD-----LTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAI 137 (362)
Q Consensus 82 Vii~vptp~~~~g~~~~~~~d-----~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l 137 (362)
||++.+.|... |. + ..| ...+++..+.+.++. ++.++++- |.|.++.-.+
T Consensus 71 Vii~ag~~~~~-g~--~-r~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~-tNPv~~~t~~ 125 (310)
T 2xxj_A 71 VVLAAGVAQRP-GE--T-RLQLLDRNAQVFAQVVPRVLEAA-PEAVLLVA-TNPVDVMTQV 125 (310)
T ss_dssp EEECCCCCCCT-TC--C-HHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEC-SSSHHHHHHH
T ss_pred EEECCCCCCCC-Cc--C-HHHHHHhhHHHHHHHHHHHHHHC-CCcEEEEe-cCchHHHHHH
Confidence 99999887543 20 0 112 345666777777774 56666554 6787765443
No 154
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=98.61 E-value=8.6e-08 Score=85.49 Aligned_cols=96 Identities=13% Similarity=0.212 Sum_probs=67.5
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeE-EEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhh-cCC
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEV-AVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHV-SEA 79 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V-~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~-~~a 79 (362)
|||+|||+|.||..++..|.+. |++| .+||+++ +. .. ..+|+++++ .++
T Consensus 1 m~vgiIG~G~mG~~~~~~l~~~--g~~lv~v~d~~~-~~------------------------~~--~~~~~~~l~~~~~ 51 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLERN--GFEIAAILDVRG-EH------------------------EK--MVRGIDEFLQREM 51 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEECSSC-CC------------------------TT--EESSHHHHTTSCC
T ss_pred CEEEEECCCHHHHHHHHHHhcC--CCEEEEEEecCc-ch------------------------hh--hcCCHHHHhcCCC
Confidence 7999999999999999999876 8997 6889873 11 01 456788877 699
Q ss_pred cEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccH---HHHHHHHHhc
Q 017997 80 DIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTA---EAIEKILTHN 144 (362)
Q Consensus 80 DvVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~---~~l~~~l~~~ 144 (362)
|+|++|+|+. ...+.+...++.|..|+++|+..+... +++.+..++.
T Consensus 52 DvVv~~~~~~------------------~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~l~~~a~~~ 101 (236)
T 2dc1_A 52 DVAVEAASQQ------------------AVKDYAEKILKAGIDLIVLSTGAFADRDFLSRVREVCRKT 101 (236)
T ss_dssp SEEEECSCHH------------------HHHHHHHHHHHTTCEEEESCGGGGGSHHHHHHHHHHHHHH
T ss_pred CEEEECCCHH------------------HHHHHHHHHHHCCCcEEEECcccCChHHHHHHHHHHHHhc
Confidence 9999998732 112223344567888888888654433 4555555443
No 155
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=98.60 E-value=2e-07 Score=86.28 Aligned_cols=111 Identities=18% Similarity=0.270 Sum_probs=71.4
Q ss_pred CceEEEEcCChhHHHHHHHHHHcCCCC--eEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcC
Q 017997 1 MVKICCIGAGYVGGPTMAVIALKCPSI--EVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSE 78 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~la~~~~G~--~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~ 78 (362)
|+||+|||+|.||..+|..++.+ |+ +|+++|++++...... ++. +....+++.++|+ +++++
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~--g~~~ev~L~Di~~~~~g~a~------------dl~-~~~~~~i~~t~d~-~~l~~ 77 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAK--GIADRLVLLDLSEGTKGATM------------DLE-IFNLPNVEISKDL-SASAH 77 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH--TCCSEEEEECCC-----CHH------------HHH-HHTCTTEEEESCG-GGGTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhc--CCCCEEEEEcCCcchHHHHH------------HHh-hhcCCCeEEeCCH-HHHCC
Confidence 47999999999999999999998 78 9999999985211111 111 1122368888898 56999
Q ss_pred CcEEEEeccCCCCCCCCCCCC----CCChHHHHHHHHHHHhhcCCCCEEEEeeCCcccc
Q 017997 79 ADIVFVSVNTPTKTQGLGAGK----AADLTYWESAARVIADVSKSDKIVVEKSTVPVKT 133 (362)
Q Consensus 79 aDvVii~vptp~~~~g~~~~~----~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt 133 (362)
||+||+++..+ . .|+ ++ .-+...+++.++.+.++. ++.++++- |.|...
T Consensus 78 aD~Vi~aag~~-~-pG~--tR~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~-sNP~~~ 130 (303)
T 2i6t_A 78 SKVVIFTVNSL-G-SSQ--SYLDVVQSNVDMFRALVPALGHYS-QHSVLLVA-SQPVEI 130 (303)
T ss_dssp CSEEEECCCC------C--CHHHHHHHHHHHHHHHHHHHHHHT-TTCEEEEC-SSSHHH
T ss_pred CCEEEEcCCCC-C-CCC--CHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEc-CChHHH
Confidence 99999998654 1 110 10 112334567778888886 67776553 345543
No 156
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=98.59 E-value=6.3e-08 Score=75.93 Aligned_cols=73 Identities=21% Similarity=0.273 Sum_probs=53.5
Q ss_pred CceEEEEcCChhHHHHHHHHHHcCCC-CeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCC
Q 017997 1 MVKICCIGAGYVGGPTMAVIALKCPS-IEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEA 79 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~la~~~~G-~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~a 79 (362)
+|+|.|+|+|.||..++..|.+. | ++|+++|+++++.+.+......... ..+.-..+..++++++
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~--g~~~v~~~~r~~~~~~~~~~~~~~~~~------------~d~~~~~~~~~~~~~~ 70 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTS--SNYSVTVADHDLAALAVLNRMGVATKQ------------VDAKDEAGLAKALGGF 70 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHC--SSEEEEEEESCHHHHHHHHTTTCEEEE------------CCTTCHHHHHHHTTTC
T ss_pred cCeEEEECCCHHHHHHHHHHHhC--CCceEEEEeCCHHHHHHHHhCCCcEEE------------ecCCCHHHHHHHHcCC
Confidence 36899999999999999999998 8 9999999999999887632211100 0010112344557799
Q ss_pred cEEEEecc
Q 017997 80 DIVFVSVN 87 (362)
Q Consensus 80 DvVii~vp 87 (362)
|+||.|+|
T Consensus 71 d~vi~~~~ 78 (118)
T 3ic5_A 71 DAVISAAP 78 (118)
T ss_dssp SEEEECSC
T ss_pred CEEEECCC
Confidence 99999986
No 157
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=98.59 E-value=4.5e-08 Score=80.38 Aligned_cols=70 Identities=13% Similarity=0.309 Sum_probs=57.2
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcE
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (362)
++|+|||+|.||..++..|... |++|+++|+++++.+.+.+.. .......++..++++++|+
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~--g~~v~v~~r~~~~~~~~a~~~----------------~~~~~~~~~~~~~~~~~Di 83 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYP--QYKVTVAGRNIDHVRAFAEKY----------------EYEYVLINDIDSLIKNNDV 83 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTT--TCEEEEEESCHHHHHHHHHHH----------------TCEEEECSCHHHHHHTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCEEEEEcCCHHHHHHHHHHh----------------CCceEeecCHHHHhcCCCE
Confidence 5899999999999999999887 889999999999988765420 1123456677788899999
Q ss_pred EEEeccCC
Q 017997 82 VFVSVNTP 89 (362)
Q Consensus 82 Vii~vptp 89 (362)
||.|+|.+
T Consensus 84 vi~at~~~ 91 (144)
T 3oj0_A 84 IITATSSK 91 (144)
T ss_dssp EEECSCCS
T ss_pred EEEeCCCC
Confidence 99998865
No 158
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=98.58 E-value=4.3e-07 Score=84.89 Aligned_cols=116 Identities=18% Similarity=0.246 Sum_probs=77.4
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCC--eEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCC
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSI--EVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEA 79 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~--~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~a 79 (362)
|||+|||+|.||.++|..|+.+ |+ +|+++|+++++++..... +...........+..++|+++ +++|
T Consensus 20 ~kV~ViGaG~vG~~~a~~l~~~--~~~~el~L~Di~~~~~~g~a~D--------L~~~~~~~~~~~i~~~~d~~~-~~~a 88 (331)
T 4aj2_A 20 NKITVVGVGAVGMACAISILMK--DLADELALVDVIEDKLKGEMMD--------LQHGSLFLKTPKIVSSKDYSV-TANS 88 (331)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCCSEEEEECSCHHHHHHHHHH--------HHHTGGGCSCCEEEECSSGGG-GTTE
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCceEEEEeCChHHHHHHHHh--------hhhhhhccCCCeEEEcCCHHH-hCCC
Confidence 7999999999999999999998 66 899999999887753321 000000001123566788874 9999
Q ss_pred cEEEEeccCCCCCCCCCCCCCCCh-----HHHHHHHHHHHhhcCCCCEEEEeeCCccccH
Q 017997 80 DIVFVSVNTPTKTQGLGAGKAADL-----TYWESAARVIADVSKSDKIVVEKSTVPVKTA 134 (362)
Q Consensus 80 DvVii~vptp~~~~g~~~~~~~d~-----~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~ 134 (362)
|+||++...|..+ |+ + ..|+ ..+++..+.+.++ .++.++++- |.|..+.
T Consensus 89 DiVvi~aG~~~kp-G~--t-R~dL~~~N~~I~~~i~~~i~~~-~p~a~vlvv-tNPvdi~ 142 (331)
T 4aj2_A 89 KLVIITAGARQQE-GE--S-RLNLVQRNVNIFKFIIPNVVKY-SPQCKLLIV-SNPVDIL 142 (331)
T ss_dssp EEEEECCSCCCCT-TC--C-GGGGHHHHHHHHHHHHHHHHHH-CTTCEEEEC-SSSHHHH
T ss_pred CEEEEccCCCCCC-Cc--c-HHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEe-cChHHHH
Confidence 9999999877543 21 1 2333 4456666777777 456666553 3566543
No 159
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=98.57 E-value=4.3e-07 Score=84.93 Aligned_cols=114 Identities=24% Similarity=0.324 Sum_probs=75.4
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCC--eEEEEeCCHHHHHHHHc---CCCCCCCCChHHHHhhhcCCCEEEecCHHhhh
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSI--EVAVVDISVSRINAWNS---DQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHV 76 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~--~V~~~d~~~~~~~~l~~---~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~ 76 (362)
|||+|||+|.+|.+++..|+.. ++ ++.++|+++++++.... ...++ ...++++.+..+++
T Consensus 10 ~KI~IiGaG~vG~~la~~l~~~--~~~~el~L~Di~~~~~~g~~~dl~~~~~~-------------~~~~~i~~~~~~a~ 74 (326)
T 2zqz_A 10 QKVILVGDGAVGSSYAYAMVLQ--GIAQEIGIVDIFKDKTKGDAIDLSNALPF-------------TSPKKIYSAEYSDA 74 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCCSEEEEECSCHHHHHHHHHHHHTTGGG-------------SCCCEEEECCGGGG
T ss_pred CEEEEECCCHHHHHHHHHHHcC--CCCCEEEEEeCCchHhHHHHHHHHHHHHh-------------cCCeEEEECCHHHh
Confidence 7999999999999999999987 55 89999999988765322 11011 12334434445669
Q ss_pred cCCcEEEEeccCCCCCCCCCCCCCCCh-----HHHHHHHHHHHhhcCCCCEEEEeeCCccccHHH
Q 017997 77 SEADIVFVSVNTPTKTQGLGAGKAADL-----TYWESAARVIADVSKSDKIVVEKSTVPVKTAEA 136 (362)
Q Consensus 77 ~~aDvVii~vptp~~~~g~~~~~~~d~-----~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~ 136 (362)
++||+||++.+.|... |. + ..|+ ..+++..+.+.++. ++.+|++- |.|.++.-.
T Consensus 75 ~~aDvVii~ag~~~k~-g~--~-R~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~-tNPv~~~t~ 133 (326)
T 2zqz_A 75 KDADLVVITAGAPQKP-GE--T-RLDLVNKNLKILKSIVDPIVDSG-FNGIFLVA-ANPVDILTY 133 (326)
T ss_dssp GGCSEEEECCCCC--------C-HHHHHHHHHHHHHHHHHHHHHHT-CCSEEEEC-SSSHHHHHH
T ss_pred CCCCEEEEcCCCCCCC-CC--C-HHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEe-CCcHHHHHH
Confidence 9999999999877543 10 0 1122 45666777777775 66666553 777776543
No 160
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=98.57 E-value=7.9e-07 Score=82.46 Aligned_cols=119 Identities=22% Similarity=0.271 Sum_probs=79.5
Q ss_pred eEEEEcCChhHHHHHHHHHHcCCCC-eEEEEeCCHHHHHHHHcCCCCCCCCChHHHHh-hhcCCCEEEecCHHhhhcCCc
Q 017997 3 KICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISVSRINAWNSDQLPIYEPGLDGVVK-QCRGKNLFFSTDVEKHVSEAD 80 (362)
Q Consensus 3 kI~VIGlG~~G~~lA~~la~~~~G~-~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~-~~~~~~l~~t~d~~~a~~~aD 80 (362)
||+|||+|.||.++|..++.+ |+ +|+++|+++++++..... +.+... .....+++.++|+ +++++||
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~--~l~el~L~Di~~~~~~g~~~d--------l~~~~~~~~~~~~i~~t~d~-~a~~~aD 69 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMR--GYDDLLLIARTPGKPQGEALD--------LAHAAAELGVDIRISGSNSY-EDMRGSD 69 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHH--TCSCEEEECSSTTHHHHHHHH--------HHHHHHHHTCCCCEEEESCG-GGGTTCS
T ss_pred CEEEECcCHHHHHHHHHHHhC--CCCEEEEEcCChhhHHHHHHH--------HHHhhhhcCCCeEEEECCCH-HHhCCCC
Confidence 799999999999999999988 66 799999998877643210 111100 0113457777887 5699999
Q ss_pred EEEEeccCCCCCCCCCCCC----CCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHH
Q 017997 81 IVFVSVNTPTKTQGLGAGK----AADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAI 137 (362)
Q Consensus 81 vVii~vptp~~~~g~~~~~----~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l 137 (362)
+||++.+.|... |. ++ ..+...+++.++.+.++. ++.++++- |.|.+..-.+
T Consensus 70 ~Vi~~ag~~~k~-G~--~r~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~-tNPv~~~t~~ 125 (308)
T 2d4a_B 70 IVLVTAGIGRKP-GM--TREQLLEANANTMADLAEKIKAYA-KDAIVVIT-TNPVDAMTYV 125 (308)
T ss_dssp EEEECCSCCCCS-SC--CTHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEC-CSSHHHHHHH
T ss_pred EEEEeCCCCCCC-CC--cHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEe-CCchHHHHHH
Confidence 999999877543 21 11 112234667777888775 66666554 5677665433
No 161
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=98.57 E-value=6.2e-07 Score=83.71 Aligned_cols=70 Identities=16% Similarity=0.272 Sum_probs=55.7
Q ss_pred CceEEEEcCChhHHHHHHHHHHcCCCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhh-cC
Q 017997 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVA-VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHV-SE 78 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~la~~~~G~~V~-~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~-~~ 78 (362)
||||+|||+|.||..++..|.+. ++++++ ++|+++++.+.+.+. .+.....+|+++++ .+
T Consensus 1 ~~~vgiiG~G~~g~~~~~~l~~~-~~~~~~~v~d~~~~~~~~~~~~-----------------~~~~~~~~~~~~~l~~~ 62 (325)
T 2ho3_A 1 MLKLGVIGTGAISHHFIEAAHTS-GEYQLVAIYSRKLETAATFASR-----------------YQNIQLFDQLEVFFKSS 62 (325)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TSEEEEEEECSSHHHHHHHGGG-----------------SSSCEEESCHHHHHTSS
T ss_pred CeEEEEEeCCHHHHHHHHHHHhC-CCeEEEEEEeCCHHHHHHHHHH-----------------cCCCeEeCCHHHHhCCC
Confidence 68999999999999999999875 366764 789999998876542 12235667888877 78
Q ss_pred CcEEEEeccC
Q 017997 79 ADIVFVSVNT 88 (362)
Q Consensus 79 aDvVii~vpt 88 (362)
+|+|++|+|+
T Consensus 63 ~D~V~i~tp~ 72 (325)
T 2ho3_A 63 FDLVYIASPN 72 (325)
T ss_dssp CSEEEECSCG
T ss_pred CCEEEEeCCh
Confidence 9999999874
No 162
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=98.56 E-value=3.3e-07 Score=86.23 Aligned_cols=69 Identities=19% Similarity=0.275 Sum_probs=56.5
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhc--C
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVA-VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS--E 78 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~-~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~--~ 78 (362)
+||+|||+|.||..++..|.+. ++++|+ ++|+++++.+.+.+. .+ ....+|++++++ +
T Consensus 5 ~rvgiiG~G~~g~~~~~~l~~~-~~~~l~av~d~~~~~~~~~a~~-----------------~g-~~~~~~~~~~l~~~~ 65 (344)
T 3euw_A 5 LRIALFGAGRIGHVHAANIAAN-PDLELVVIADPFIEGAQRLAEA-----------------NG-AEAVASPDEVFARDD 65 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHC-TTEEEEEEECSSHHHHHHHHHT-----------------TT-CEEESSHHHHTTCSC
T ss_pred eEEEEECCcHHHHHHHHHHHhC-CCcEEEEEECCCHHHHHHHHHH-----------------cC-CceeCCHHHHhcCCC
Confidence 6899999999999999999875 478877 689999998877652 12 466788998887 8
Q ss_pred CcEEEEeccCC
Q 017997 79 ADIVFVSVNTP 89 (362)
Q Consensus 79 aDvVii~vptp 89 (362)
+|+|++|+|+.
T Consensus 66 ~D~V~i~tp~~ 76 (344)
T 3euw_A 66 IDGIVIGSPTS 76 (344)
T ss_dssp CCEEEECSCGG
T ss_pred CCEEEEeCCch
Confidence 99999998753
No 163
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=98.54 E-value=2.6e-07 Score=84.37 Aligned_cols=93 Identities=14% Similarity=0.150 Sum_probs=69.6
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcE
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (362)
++|+|||+|.||.+++..|.+. |++|+++|+++++.+.+.+.. .+.+.+++.++++++|+
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~--g~~V~v~~r~~~~~~~l~~~~------------------g~~~~~~~~~~~~~aDi 189 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKE--GAKVFLWNRTKEKAIKLAQKF------------------PLEVVNSPEEVIDKVQV 189 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHH--TCEEEEECSSHHHHHHHTTTS------------------CEEECSCGGGTGGGCSE
T ss_pred CEEEEECchHHHHHHHHHHHHc--CCEEEEEECCHHHHHHHHHHc------------------CCeeehhHHhhhcCCCE
Confidence 6899999999999999999998 889999999999988876421 24455577777899999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeC
Q 017997 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKST 128 (362)
Q Consensus 82 Vii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~ST 128 (362)
||.|+|.+... +.. ..+. .+.++++.+|++.++
T Consensus 190 Vi~atp~~~~~---------~~~---~~i~--~~~l~~g~~viDv~~ 222 (275)
T 2hk9_A 190 IVNTTSVGLKD---------EDP---EIFN--YDLIKKDHVVVDIIY 222 (275)
T ss_dssp EEECSSTTSST---------TCC---CSSC--GGGCCTTSEEEESSS
T ss_pred EEEeCCCCCCC---------CCC---CCCC--HHHcCCCCEEEEcCC
Confidence 99999865421 000 0010 245778899888766
No 164
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=98.54 E-value=3.7e-07 Score=85.47 Aligned_cols=69 Identities=16% Similarity=0.192 Sum_probs=55.3
Q ss_pred CceEEEEcCChhHHHHHHHHHHcCCCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhc--
Q 017997 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVA-VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS-- 77 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~la~~~~G~~V~-~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~-- 77 (362)
|+||+|||+|.||..++..|.+. ++++++ ++|+++++.+.+.+. -++. .+|++++++
T Consensus 3 ~~~vgiiG~G~~g~~~~~~l~~~-~~~~l~av~d~~~~~~~~~~~~------------------~~~~-~~~~~~~l~~~ 62 (331)
T 4hkt_A 3 TVRFGLLGAGRIGKVHAKAVSGN-ADARLVAVADAFPAAAEAIAGA------------------YGCE-VRTIDAIEAAA 62 (331)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHC-TTEEEEEEECSSHHHHHHHHHH------------------TTCE-ECCHHHHHHCT
T ss_pred ceEEEEECCCHHHHHHHHHHhhC-CCcEEEEEECCCHHHHHHHHHH------------------hCCC-cCCHHHHhcCC
Confidence 36999999999999999999875 478877 689999998877642 1234 678888776
Q ss_pred CCcEEEEeccCC
Q 017997 78 EADIVFVSVNTP 89 (362)
Q Consensus 78 ~aDvVii~vptp 89 (362)
++|+|++|+|+.
T Consensus 63 ~~D~V~i~tp~~ 74 (331)
T 4hkt_A 63 DIDAVVICTPTD 74 (331)
T ss_dssp TCCEEEECSCGG
T ss_pred CCCEEEEeCCch
Confidence 899999998753
No 165
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=98.52 E-value=5.8e-07 Score=74.60 Aligned_cols=40 Identities=23% Similarity=0.248 Sum_probs=37.0
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHH
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWN 43 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~ 43 (362)
++|.|+|+|.+|..++..|.+. |++|+++|+++++++.++
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~--g~~V~vid~~~~~~~~~~ 59 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSS--GHSVVVVDKNEYAFHRLN 59 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCGGGGGGSC
T ss_pred CcEEEECCCHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHH
Confidence 6899999999999999999998 899999999999887765
No 166
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=98.52 E-value=3.8e-07 Score=86.27 Aligned_cols=70 Identities=16% Similarity=0.278 Sum_probs=56.3
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhc--C
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVA-VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS--E 78 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~-~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~--~ 78 (362)
+||+|||+|.||..++..|.+..++++++ ++|+++++.+.+.+. -++...+|++++++ +
T Consensus 14 ~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~------------------~~~~~~~~~~~ll~~~~ 75 (354)
T 3q2i_A 14 IRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVER------------------TGARGHASLTDMLAQTD 75 (354)
T ss_dssp EEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHH------------------HCCEEESCHHHHHHHCC
T ss_pred ceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHH------------------cCCceeCCHHHHhcCCC
Confidence 68999999999999999998763478865 789999998876541 12467789988776 8
Q ss_pred CcEEEEeccCC
Q 017997 79 ADIVFVSVNTP 89 (362)
Q Consensus 79 aDvVii~vptp 89 (362)
+|+|++|+|+.
T Consensus 76 ~D~V~i~tp~~ 86 (354)
T 3q2i_A 76 ADIVILTTPSG 86 (354)
T ss_dssp CSEEEECSCGG
T ss_pred CCEEEECCCcH
Confidence 99999998753
No 167
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=98.52 E-value=5.7e-07 Score=83.86 Aligned_cols=118 Identities=21% Similarity=0.253 Sum_probs=72.3
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCC--eEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCC
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSI--EVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEA 79 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~--~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~a 79 (362)
|||+|||+|.||.++|..|+.. |+ +++++|+++++++......... .. . ....+.+++..+++++|
T Consensus 10 ~kV~ViGaG~vG~~~a~~l~~~--~~~~el~l~D~~~~k~~g~a~DL~~~--------~~-~-~~~~~i~~~~~~a~~~a 77 (326)
T 3vku_A 10 QKVILVGDGAVGSSYAYAMVLQ--GIAQEIGIVDIFKDKTKGDAIDLEDA--------LP-F-TSPKKIYSAEYSDAKDA 77 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCCSEEEEECSCHHHHHHHHHHHHTT--------GG-G-SCCCEEEECCGGGGTTC
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCCeEEEEeCChHHHHHHHhhHhhh--------hh-h-cCCcEEEECcHHHhcCC
Confidence 7999999999999999999988 66 8999999999887443210000 00 0 01234444434569999
Q ss_pred cEEEEeccCCCCCCCCCCC--CCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccH
Q 017997 80 DIVFVSVNTPTKTQGLGAG--KAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTA 134 (362)
Q Consensus 80 DvVii~vptp~~~~g~~~~--~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~ 134 (362)
|+||++.+.|..+ |.... -..+...+++..+.+.++. ++.++++- |.|..+.
T Consensus 78 DiVvi~ag~~~kp-G~tR~dL~~~N~~I~~~i~~~i~~~~-p~a~ilvv-tNPvdi~ 131 (326)
T 3vku_A 78 DLVVITAGAPQKP-GETRLDLVNKNLKILKSIVDPIVDSG-FNGIFLVA-ANPVDIL 131 (326)
T ss_dssp SEEEECCCCC-----------------CHHHHHHHHHTTT-CCSEEEEC-SSSHHHH
T ss_pred CEEEECCCCCCCC-CchHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEc-cCchHHH
Confidence 9999998877543 21100 0112344667777888775 45665543 4566543
No 168
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=98.51 E-value=8.5e-07 Score=83.08 Aligned_cols=116 Identities=16% Similarity=0.259 Sum_probs=78.5
Q ss_pred ceEEEEcC-ChhHHHHHHHHHHcCCCC-------eEEEEeCC----HHHHHH----HHcCCCCCCCCChHHHHhhhcCCC
Q 017997 2 VKICCIGA-GYVGGPTMAVIALKCPSI-------EVAVVDIS----VSRINA----WNSDQLPIYEPGLDGVVKQCRGKN 65 (362)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~la~~~~G~-------~V~~~d~~----~~~~~~----l~~~~~~~~e~~l~~~~~~~~~~~ 65 (362)
|||+|+|+ |++|.+++..|+.. |+ +|.++|++ +++.+. +.....++ ...
T Consensus 6 ~KI~ViGaaG~VG~~l~~~L~~~--~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~-------------~~~ 70 (329)
T 1b8p_A 6 MRVAVTGAAGQICYSLLFRIANG--DMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPL-------------LAG 70 (329)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTT--TTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTT-------------EEE
T ss_pred CEEEEECCCChHHHHHHHHHHhC--CCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccc-------------cCc
Confidence 79999997 99999999999987 64 89999999 655543 33321111 134
Q ss_pred EEEecCHHhhhcCCcEEEEeccCCCCCCCCCCCC----CCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHH
Q 017997 66 LFFSTDVEKHVSEADIVFVSVNTPTKTQGLGAGK----AADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEA 136 (362)
Q Consensus 66 l~~t~d~~~a~~~aDvVii~vptp~~~~g~~~~~----~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~ 136 (362)
++.+++..+++++||+||++...|... +. ++ ..+...+++.++.+.++..++..+++.| .|.++.-.
T Consensus 71 i~~~~~~~~al~~aD~Vi~~ag~~~~~-g~--~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~S-NPv~~~t~ 141 (329)
T 1b8p_A 71 MTAHADPMTAFKDADVALLVGARPRGP-GM--ERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVG-NPANTNAY 141 (329)
T ss_dssp EEEESSHHHHTTTCSEEEECCCCCCCT-TC--CHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS-SSHHHHHH
T ss_pred EEEecCcHHHhCCCCEEEEeCCCCCCC-CC--CHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcc-CchHHHHH
Confidence 677888888899999999998866432 10 00 0122445666777777754566666655 66665443
No 169
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=98.51 E-value=2.2e-07 Score=86.10 Aligned_cols=69 Identities=16% Similarity=0.256 Sum_probs=53.8
Q ss_pred ceEEEEcCChhHHH-HHHHHHHcCCCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCC
Q 017997 2 VKICCIGAGYVGGP-TMAVIALKCPSIEVA-VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEA 79 (362)
Q Consensus 2 mkI~VIGlG~~G~~-lA~~la~~~~G~~V~-~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~a 79 (362)
+||+|||+|.||.. ++..|.+. ++++++ ++|+++++.+.+.+.. ++...+|+++.++++
T Consensus 7 ~~igiIG~G~~g~~~~~~~l~~~-~~~~l~av~d~~~~~~~~~a~~~------------------~~~~~~~~~~ll~~~ 67 (308)
T 3uuw_A 7 IKMGMIGLGSIAQKAYLPILTKS-ERFEFVGAFTPNKVKREKICSDY------------------RIMPFDSIESLAKKC 67 (308)
T ss_dssp CEEEEECCSHHHHHHTHHHHTSC-SSSEEEEEECSCHHHHHHHHHHH------------------TCCBCSCHHHHHTTC
T ss_pred CcEEEEecCHHHHHHHHHHHHhC-CCeEEEEEECCCHHHHHHHHHHc------------------CCCCcCCHHHHHhcC
Confidence 58999999999996 78878764 478877 7899999988776420 122267888888899
Q ss_pred cEEEEeccCC
Q 017997 80 DIVFVSVNTP 89 (362)
Q Consensus 80 DvVii~vptp 89 (362)
|+|++|+|+.
T Consensus 68 D~V~i~tp~~ 77 (308)
T 3uuw_A 68 DCIFLHSSTE 77 (308)
T ss_dssp SEEEECCCGG
T ss_pred CEEEEeCCcH
Confidence 9999998753
No 170
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=98.51 E-value=3.9e-07 Score=85.83 Aligned_cols=71 Identities=17% Similarity=0.207 Sum_probs=55.4
Q ss_pred CceEEEEcCChhHHHHHHHHHHcCCCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhc--
Q 017997 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVA-VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS-- 77 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~la~~~~G~~V~-~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~-- 77 (362)
||||+|||+|.||..++..|.+. ++++++ ++|+++++.+.+.+.. +.....+|++++++
T Consensus 2 ~~rvgiIG~G~~g~~~~~~l~~~-~~~~l~av~d~~~~~~~~~~~~~-----------------~~~~~~~~~~~ll~~~ 63 (344)
T 3ezy_A 2 SLRIGVIGLGRIGTIHAENLKMI-DDAILYAISDVREDRLREMKEKL-----------------GVEKAYKDPHELIEDP 63 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHGGGS-TTEEEEEEECSCHHHHHHHHHHH-----------------TCSEEESSHHHHHHCT
T ss_pred eeEEEEEcCCHHHHHHHHHHHhC-CCcEEEEEECCCHHHHHHHHHHh-----------------CCCceeCCHHHHhcCC
Confidence 36999999999999999998874 477876 6799999988765420 11246688888777
Q ss_pred CCcEEEEeccCC
Q 017997 78 EADIVFVSVNTP 89 (362)
Q Consensus 78 ~aDvVii~vptp 89 (362)
++|+|++|+|+.
T Consensus 64 ~~D~V~i~tp~~ 75 (344)
T 3ezy_A 64 NVDAVLVCSSTN 75 (344)
T ss_dssp TCCEEEECSCGG
T ss_pred CCCEEEEcCCCc
Confidence 899999998753
No 171
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=98.50 E-value=4.8e-07 Score=83.60 Aligned_cols=95 Identities=15% Similarity=0.238 Sum_probs=70.4
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcE
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (362)
++|+|||+|.||..+|..+... |++|++||+++++.+.+.+.. .......++++.++++|+
T Consensus 158 ~~v~IiG~G~iG~~~a~~l~~~--G~~V~~~d~~~~~~~~~~~~g-----------------~~~~~~~~l~~~l~~aDv 218 (300)
T 2rir_A 158 SQVAVLGLGRTGMTIARTFAAL--GANVKVGARSSAHLARITEMG-----------------LVPFHTDELKEHVKDIDI 218 (300)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHTT-----------------CEEEEGGGHHHHSTTCSE
T ss_pred CEEEEEcccHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHCC-----------------CeEEchhhHHHHhhCCCE
Confidence 5899999999999999999988 899999999998877654310 011112456777899999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCcccc
Q 017997 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKT 133 (362)
Q Consensus 82 Vii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt 133 (362)
|++++|... .+ . ...+.++++.++++.+.-+.++
T Consensus 219 Vi~~~p~~~----------i~----~----~~~~~mk~g~~lin~a~g~~~~ 252 (300)
T 2rir_A 219 CINTIPSMI----------LN----Q----TVLSSMTPKTLILDLASRPGGT 252 (300)
T ss_dssp EEECCSSCC----------BC----H----HHHTTSCTTCEEEECSSTTCSB
T ss_pred EEECCChhh----------hC----H----HHHHhCCCCCEEEEEeCCCCCc
Confidence 999988532 11 1 2345688999999988766555
No 172
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=98.49 E-value=3.2e-07 Score=74.87 Aligned_cols=97 Identities=20% Similarity=0.227 Sum_probs=69.3
Q ss_pred ceEEEEcC----ChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhc
Q 017997 2 VKICCIGA----GYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS 77 (362)
Q Consensus 2 mkI~VIGl----G~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~ 77 (362)
.+|+|||+ |.||..++.+|.+. ||+|+.+|.+.+.+ ..+....+++++.+
T Consensus 15 ~~IavIGaS~~~g~~G~~~~~~L~~~--G~~V~~vnp~~~~i------------------------~G~~~~~s~~el~~ 68 (138)
T 1y81_A 15 RKIALVGASKNPAKYGNIILKDLLSK--GFEVLPVNPNYDEI------------------------EGLKCYRSVRELPK 68 (138)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHT--TCEEEEECTTCSEE------------------------TTEECBSSGGGSCT
T ss_pred CeEEEEeecCCCCCHHHHHHHHHHHC--CCEEEEeCCCCCeE------------------------CCeeecCCHHHhCC
Confidence 58999999 99999999999998 99866666542111 13566677888667
Q ss_pred CCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhc
Q 017997 78 EADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHN 144 (362)
Q Consensus 78 ~aDvVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~ 144 (362)
.+|++++|+|. ..+.++++++.+ ...+.+++..||. .+++.+..++.
T Consensus 69 ~vDlvii~vp~---------------~~v~~v~~~~~~-~g~~~i~~~~~~~----~~~l~~~a~~~ 115 (138)
T 1y81_A 69 DVDVIVFVVPP---------------KVGLQVAKEAVE-AGFKKLWFQPGAE----SEEIRRFLEKA 115 (138)
T ss_dssp TCCEEEECSCH---------------HHHHHHHHHHHH-TTCCEEEECTTSC----CHHHHHHHHHH
T ss_pred CCCEEEEEeCH---------------HHHHHHHHHHHH-cCCCEEEEcCccH----HHHHHHHHHHC
Confidence 89999999983 245677777666 4556677765553 46666666654
No 173
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=98.48 E-value=1.7e-06 Score=79.38 Aligned_cols=119 Identities=19% Similarity=0.255 Sum_probs=75.6
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhh-cCCCEEEecCHHhhhcCCc
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQC-RGKNLFFSTDVEKHVSEAD 80 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~-~~~~l~~t~d~~~a~~~aD 80 (362)
|||+|||+|.+|.++|..|+.++.-.++.++|+++++.+..... +....... ...++..++|+++ +++||
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~D--------L~h~~~~~~~~~~i~~~~d~~~-~~~aD 71 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMD--------LAHAAAGIDKYPKIVGGADYSL-LKGSE 71 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHH--------HHHHHGGGTCCCEEEEESCGGG-GTTCS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhh--------hhcccccCCCCCeEecCCCHHH-hCCCC
Confidence 89999999999999999998872224899999998776532210 11100000 1123566778865 99999
Q ss_pred EEEEeccCCCCCCCCCCCC----CCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccH
Q 017997 81 IVFVSVNTPTKTQGLGAGK----AADLTYWESAARVIADVSKSDKIVVEKSTVPVKTA 134 (362)
Q Consensus 81 vVii~vptp~~~~g~~~~~----~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~ 134 (362)
+|+++-..|..+ |+ +| ..+.+.+++..+.+.++.+ +.++++ -|.|..+.
T Consensus 72 vVvitAG~prkp-Gm--tR~dLl~~Na~I~~~i~~~i~~~~p-~aivlv-vsNPvd~~ 124 (294)
T 2x0j_A 72 IIVVTAGLARKP-GM--TRLDLAHKNAGIIKDIAKKIVENAP-ESKILV-VTNPMDVM 124 (294)
T ss_dssp EEEECCCCCCCS-SS--CHHHHHHHHHHHHHHHHHHHHTTST-TCEEEE-CSSSHHHH
T ss_pred EEEEecCCCCCC-CC--chHHHHHHHHHHHHHHHHHHHhcCC-ceEEEE-ecCcchhh
Confidence 999998877543 21 11 1123455666777777754 455543 35566554
No 174
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=98.48 E-value=4.4e-07 Score=88.35 Aligned_cols=122 Identities=16% Similarity=0.178 Sum_probs=79.3
Q ss_pred ceEEEEcCChh-HHHHHHHHHH--cC-CCCeEEEEeCCH--HHHHHHHcCCCCCCCCChHHHHhh-hcCCCEEEecCHHh
Q 017997 2 VKICCIGAGYV-GGPTMAVIAL--KC-PSIEVAVVDISV--SRINAWNSDQLPIYEPGLDGVVKQ-CRGKNLFFSTDVEK 74 (362)
Q Consensus 2 mkI~VIGlG~~-G~~lA~~la~--~~-~G~~V~~~d~~~--~~~~~l~~~~~~~~e~~l~~~~~~-~~~~~l~~t~d~~~ 74 (362)
|||+|||+|.+ |.+++..|+. .. ++++|++||+++ ++++.++.- ...+... ....+++.++|+.+
T Consensus 8 ~KIaVIGaGsv~~~al~~~L~~~~~~l~~~ev~L~Di~~~~e~~~~~~~~--------~~~~~~~~~~~~~i~~t~D~~e 79 (450)
T 1s6y_A 8 LKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGAL--------AKRMVEKAGVPIEIHLTLDRRR 79 (450)
T ss_dssp EEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHH--------HHHHHHHTTCCCEEEEESCHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCCCCCCEEEEEEcCCChHHHHHHHHH--------HHHHHhhcCCCcEEEEeCCHHH
Confidence 69999999999 8788888887 21 257899999999 888775421 0111111 12345788899988
Q ss_pred hhcCCcEEEEeccCCCCCCCCCCC---------CCCC-------------hHHHHHHHHHHHhhcCCCCEEEEeeCCccc
Q 017997 75 HVSEADIVFVSVNTPTKTQGLGAG---------KAAD-------------LTYWESAARVIADVSKSDKIVVEKSTVPVK 132 (362)
Q Consensus 75 a~~~aDvVii~vptp~~~~g~~~~---------~~~d-------------~~~l~~~~~~i~~~l~~~~iVv~~STv~~g 132 (362)
++++||+||+++|.+... +...+ ...| +..+.++++.|.++. |+.++++ .|.|.+
T Consensus 80 al~gAD~VVitagv~~~~-~~~rd~~ip~~~g~~~~et~G~ggi~~~~rni~i~~~i~~~i~~~~-P~a~ii~-~tNPvd 156 (450)
T 1s6y_A 80 ALDGADFVTTQFRVGGLE-ARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELC-PDAWLIN-FTNPAG 156 (450)
T ss_dssp HHTTCSEEEECCCTTHHH-HHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEE-CSSSHH
T ss_pred HhCCCCEEEEcCCCCCCc-chhhhhhhhhhcCcccccccccchHHHHhhhHHHHHHHHHHHHHHC-CCeEEEE-eCCcHH
Confidence 899999999999875321 00000 0001 134667777888776 5666654 567776
Q ss_pred cH
Q 017997 133 TA 134 (362)
Q Consensus 133 t~ 134 (362)
..
T Consensus 157 iv 158 (450)
T 1s6y_A 157 MV 158 (450)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 175
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=98.47 E-value=1.1e-06 Score=81.03 Aligned_cols=95 Identities=14% Similarity=0.183 Sum_probs=69.1
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcE
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (362)
++|+|||+|.||..+|..+... |.+|++||+++++.+.+.+-. ....-..++++.++++|+
T Consensus 156 ~~v~IiG~G~iG~~~a~~l~~~--G~~V~~~dr~~~~~~~~~~~g-----------------~~~~~~~~l~~~l~~aDv 216 (293)
T 3d4o_A 156 ANVAVLGLGRVGMSVARKFAAL--GAKVKVGARESDLLARIAEMG-----------------MEPFHISKAAQELRDVDV 216 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHTT-----------------SEEEEGGGHHHHTTTCSE
T ss_pred CEEEEEeeCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHHCC-----------------CeecChhhHHHHhcCCCE
Confidence 5899999999999999999988 899999999998776554310 011112456677899999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCcccc
Q 017997 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKT 133 (362)
Q Consensus 82 Vii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt 133 (362)
|++++|... .+ .+ ..+.++++.++++.+..+.++
T Consensus 217 Vi~~~p~~~----------i~----~~----~l~~mk~~~~lin~ar~~~~~ 250 (293)
T 3d4o_A 217 CINTIPALV----------VT----AN----VLAEMPSHTFVIDLASKPGGT 250 (293)
T ss_dssp EEECCSSCC----------BC----HH----HHHHSCTTCEEEECSSTTCSB
T ss_pred EEECCChHH----------hC----HH----HHHhcCCCCEEEEecCCCCCC
Confidence 999987432 11 11 234578899999988766555
No 176
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=98.46 E-value=1e-06 Score=71.74 Aligned_cols=43 Identities=19% Similarity=0.196 Sum_probs=39.4
Q ss_pred CceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcC
Q 017997 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSD 45 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~ 45 (362)
|++|.|+|+|.+|..+|..|.+. |++|+++|+++++++.+.+.
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~--g~~V~~id~~~~~~~~~~~~ 48 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAA--GKKVLAVDKSKEKIELLEDE 48 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT--TCCEEEEESCHHHHHHHHHT
T ss_pred CCEEEEECCCHHHHHHHHHHHHC--CCeEEEEECCHHHHHHHHHC
Confidence 35899999999999999999999 99999999999999988753
No 177
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=98.45 E-value=8.6e-07 Score=83.44 Aligned_cols=71 Identities=21% Similarity=0.315 Sum_probs=55.6
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCC-CEEEecCHHhhhcC-
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVA-VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGK-NLFFSTDVEKHVSE- 78 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~-~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~-~l~~t~d~~~a~~~- 78 (362)
+||+|||+|.||..++..|.+..++++++ ++|+++++.+.+.+.. + .....+|+++++++
T Consensus 3 ~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~~~~~~~~~~~~~-----------------g~~~~~~~~~~~ll~~~ 65 (344)
T 3mz0_A 3 LRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDVNQEAAQKVVEQY-----------------QLNATVYPNDDSLLADE 65 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTCSSEEEEEEECSSHHHHHHHHHHT-----------------TCCCEEESSHHHHHHCT
T ss_pred EEEEEECccHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHh-----------------CCCCeeeCCHHHHhcCC
Confidence 59999999999999999998433478866 6799999988776421 1 14567889887765
Q ss_pred -CcEEEEeccCC
Q 017997 79 -ADIVFVSVNTP 89 (362)
Q Consensus 79 -aDvVii~vptp 89 (362)
+|+|++|+|+.
T Consensus 66 ~~D~V~i~tp~~ 77 (344)
T 3mz0_A 66 NVDAVLVTSWGP 77 (344)
T ss_dssp TCCEEEECSCGG
T ss_pred CCCEEEECCCch
Confidence 99999998753
No 178
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=98.44 E-value=6.2e-07 Score=87.04 Aligned_cols=76 Identities=21% Similarity=0.205 Sum_probs=57.4
Q ss_pred ceEEEEcCChh--HHHHHHHHHHcC--CCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhc
Q 017997 2 VKICCIGAGYV--GGPTMAVIALKC--PSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS 77 (362)
Q Consensus 2 mkI~VIGlG~~--G~~lA~~la~~~--~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~ 77 (362)
|||+|||+|.| |..++..|+... .| +|++||+++++++.++.-...+.+ ...++++|+|.++|++
T Consensus 6 ~KIaVIGaGs~g~g~~la~~l~~~~~~~g-eV~L~Di~~e~le~~~~~~~~l~~----------~~~~I~~TtD~~eAl~ 74 (450)
T 3fef_A 6 IKIAYIGGGSQGWARSLMSDLSIDERMSG-TVALYDLDFEAAQKNEVIGNHSGN----------GRWRYEAVSTLKKALS 74 (450)
T ss_dssp EEEEEETTTCSSHHHHHHHHHHHCSSCCE-EEEEECSSHHHHHHHHHHHTTSTT----------SCEEEEEESSHHHHHT
T ss_pred CEEEEECCChhHhHHHHHHHHHhccccCC-eEEEEeCCHHHHHHHHHHHHHHhc----------cCCeEEEECCHHHHhc
Confidence 59999999996 678888888621 16 999999999888765431111111 1246889999999999
Q ss_pred CCcEEEEeccC
Q 017997 78 EADIVFVSVNT 88 (362)
Q Consensus 78 ~aDvVii~vpt 88 (362)
+||+||++++.
T Consensus 75 dADfVI~airv 85 (450)
T 3fef_A 75 AADIVIISILP 85 (450)
T ss_dssp TCSEEEECCCS
T ss_pred CCCEEEecccc
Confidence 99999999963
No 179
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=98.42 E-value=4e-07 Score=85.95 Aligned_cols=103 Identities=12% Similarity=0.024 Sum_probs=74.4
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcE
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (362)
++|+|||+|.||..++..|....+..+|.+||+++++.+++.+.... .++ -.+...++++++++++|+
T Consensus 130 ~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r~~~~a~~la~~~~~--~~g----------~~~~~~~~~~eav~~aDi 197 (350)
T 1x7d_A 130 RKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKE--YSG----------LTIRRASSVAEAVKGVDI 197 (350)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTT--CTT----------CEEEECSSHHHHHTTCSE
T ss_pred CeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHh--ccC----------ceEEEeCCHHHHHhcCCE
Confidence 58999999999999998886543367999999999999887652100 000 124567788888999999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCcccc
Q 017997 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKT 133 (362)
Q Consensus 82 Vii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt 133 (362)
|++|+|++... + .+. ...+++++.|+..++..|+.
T Consensus 198 Vi~aTps~~~~--------p-------vl~--~~~l~~G~~V~~vgs~~p~~ 232 (350)
T 1x7d_A 198 ITTVTADKAYA--------T-------IIT--PDMLEPGMHLNAVGGDCPGK 232 (350)
T ss_dssp EEECCCCSSEE--------E-------EEC--GGGCCTTCEEEECSCCBTTB
T ss_pred EEEeccCCCCC--------c-------eec--HHHcCCCCEEEECCCCCCCc
Confidence 99998864210 0 000 14678999999989887774
No 180
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=98.41 E-value=9e-07 Score=83.65 Aligned_cols=69 Identities=12% Similarity=0.170 Sum_probs=53.7
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhh--cC
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVA-VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHV--SE 78 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~-~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~--~~ 78 (362)
+||+|||+|.||..++..|.+. ++++|+ ++|+++++.+.+.+.. ++...+|+++++ .+
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~-~~~~lvav~d~~~~~~~~~~~~~------------------g~~~~~~~~~~l~~~~ 66 (354)
T 3db2_A 6 VGVAAIGLGRWAYVMADAYTKS-EKLKLVTCYSRTEDKREKFGKRY------------------NCAGDATMEALLARED 66 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHTTC-SSEEEEEEECSSHHHHHHHHHHH------------------TCCCCSSHHHHHHCSS
T ss_pred ceEEEEccCHHHHHHHHHHHhC-CCcEEEEEECCCHHHHHHHHHHc------------------CCCCcCCHHHHhcCCC
Confidence 4899999999999999988865 478865 7799999988765410 123357888877 57
Q ss_pred CcEEEEeccCC
Q 017997 79 ADIVFVSVNTP 89 (362)
Q Consensus 79 aDvVii~vptp 89 (362)
+|+|++|+|+.
T Consensus 67 ~D~V~i~tp~~ 77 (354)
T 3db2_A 67 VEMVIITVPND 77 (354)
T ss_dssp CCEEEECSCTT
T ss_pred CCEEEEeCChH
Confidence 99999998864
No 181
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=98.41 E-value=2.8e-06 Score=69.17 Aligned_cols=71 Identities=14% Similarity=0.248 Sum_probs=52.7
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCC--CCChHHHHhhhcCCCEEEecCHHh-hhcC
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIY--EPGLDGVVKQCRGKNLFFSTDVEK-HVSE 78 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~--e~~l~~~~~~~~~~~l~~t~d~~~-a~~~ 78 (362)
++|.|+|+|.+|..+|..|.+. |++|+++|+|+++++.+++...+.. +....+. +.+ .+.+
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~--g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~--------------l~~a~i~~ 71 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLAS--DIPLVVIETSRTRVDELRERGVRAVLGNAANEEI--------------MQLAHLEC 71 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT--TCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHH--------------HHHTTGGG
T ss_pred CCEEEECcCHHHHHHHHHHHHC--CCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHH--------------HHhcCccc
Confidence 4799999999999999999998 9999999999999998876322211 1111111 111 2578
Q ss_pred CcEEEEeccC
Q 017997 79 ADIVFVSVNT 88 (362)
Q Consensus 79 aDvVii~vpt 88 (362)
+|++|+++|.
T Consensus 72 ad~vi~~~~~ 81 (140)
T 3fwz_A 72 AKWLILTIPN 81 (140)
T ss_dssp CSEEEECCSC
T ss_pred CCEEEEECCC
Confidence 9999999874
No 182
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=98.40 E-value=7.9e-07 Score=82.63 Aligned_cols=66 Identities=21% Similarity=0.283 Sum_probs=51.7
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeE-EEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhc--C
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEV-AVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS--E 78 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V-~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~--~ 78 (362)
|||+|||+|.||..++..|.+. +++++ .++|+++++.+.+.+. +...+|++++++ +
T Consensus 11 ~~igiIG~G~~g~~~~~~l~~~-~~~~~v~v~d~~~~~~~~~~~~--------------------~~~~~~~~~~l~~~~ 69 (315)
T 3c1a_A 11 VRLALIGAGRWGKNYIRTIAGL-PGAALVRLASSNPDNLALVPPG--------------------CVIESDWRSVVSAPE 69 (315)
T ss_dssp EEEEEEECTTTTTTHHHHHHHC-TTEEEEEEEESCHHHHTTCCTT--------------------CEEESSTHHHHTCTT
T ss_pred ceEEEECCcHHHHHHHHHHHhC-CCcEEEEEEeCCHHHHHHHHhh--------------------CcccCCHHHHhhCCC
Confidence 6899999999999999999875 36775 5889999887654321 345677888775 7
Q ss_pred CcEEEEeccC
Q 017997 79 ADIVFVSVNT 88 (362)
Q Consensus 79 aDvVii~vpt 88 (362)
+|+|++|+|+
T Consensus 70 ~D~V~i~tp~ 79 (315)
T 3c1a_A 70 VEAVIIATPP 79 (315)
T ss_dssp CCEEEEESCG
T ss_pred CCEEEEeCCh
Confidence 9999999874
No 183
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=98.39 E-value=4.4e-07 Score=82.21 Aligned_cols=103 Identities=18% Similarity=0.147 Sum_probs=71.3
Q ss_pred eEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcEE
Q 017997 3 KICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADIV 82 (362)
Q Consensus 3 kI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDvV 82 (362)
+|+|||+|.||.+++..|.+. |++|+++|+++++.+.+.+.. + .. .++++++ +++|+|
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~--g~~v~v~~r~~~~~~~l~~~~-----------------~-~~-~~~~~~~-~~~Div 175 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREA--GLEVWVWNRTPQRALALAEEF-----------------G-LR-AVPLEKA-REARLL 175 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHT--TCCEEEECSSHHHHHHHHHHH-----------------T-CE-ECCGGGG-GGCSEE
T ss_pred eEEEECCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHh-----------------c-cc-hhhHhhc-cCCCEE
Confidence 699999999999999999998 889999999998887765410 1 12 3466776 899999
Q ss_pred EEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHh
Q 017997 83 FVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTH 143 (362)
Q Consensus 83 ii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~ 143 (362)
|+|+|.+... +.. ..+. .+.++++++|++.++.|..| ++.+..++
T Consensus 176 i~~tp~~~~~---------~~~---~~l~--~~~l~~g~~viD~~~~p~~t--~l~~~a~~ 220 (263)
T 2d5c_A 176 VNATRVGLED---------PSA---SPLP--AELFPEEGAAVDLVYRPLWT--RFLREAKA 220 (263)
T ss_dssp EECSSTTTTC---------TTC---CSSC--GGGSCSSSEEEESCCSSSSC--HHHHHHHH
T ss_pred EEccCCCCCC---------CCC---CCCC--HHHcCCCCEEEEeecCCccc--HHHHHHHH
Confidence 9998865321 000 0011 34577889988877765544 34444433
No 184
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=98.39 E-value=6.1e-07 Score=84.04 Aligned_cols=70 Identities=9% Similarity=0.091 Sum_probs=54.3
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhc--C
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVA-VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS--E 78 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~-~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~--~ 78 (362)
+||+|||+|.||..++..|.+. ++++|+ ++|+++++.+.+.+.. +....++|++++++ +
T Consensus 6 ~~igiiG~G~~g~~~~~~l~~~-~~~~l~av~d~~~~~~~~~~~~~-----------------~~~~~~~~~~~ll~~~~ 67 (330)
T 3e9m_A 6 IRYGIMSTAQIVPRFVAGLRES-AQAEVRGIASRRLENAQKMAKEL-----------------AIPVAYGSYEELCKDET 67 (330)
T ss_dssp EEEEECSCCTTHHHHHHHHHHS-SSEEEEEEBCSSSHHHHHHHHHT-----------------TCCCCBSSHHHHHHCTT
T ss_pred EEEEEECchHHHHHHHHHHHhC-CCcEEEEEEeCCHHHHHHHHHHc-----------------CCCceeCCHHHHhcCCC
Confidence 5899999999999999999885 377877 6799999888765421 11134678888776 7
Q ss_pred CcEEEEeccCC
Q 017997 79 ADIVFVSVNTP 89 (362)
Q Consensus 79 aDvVii~vptp 89 (362)
+|+|++|+|+.
T Consensus 68 ~D~V~i~tp~~ 78 (330)
T 3e9m_A 68 IDIIYIPTYNQ 78 (330)
T ss_dssp CSEEEECCCGG
T ss_pred CCEEEEcCCCH
Confidence 99999998753
No 185
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=98.36 E-value=5.2e-07 Score=74.26 Aligned_cols=97 Identities=13% Similarity=0.034 Sum_probs=67.8
Q ss_pred ceEEEEcC----ChhHHHHHHHHHHcCCCCeEEEEeCCH--HHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhh
Q 017997 2 VKICCIGA----GYVGGPTMAVIALKCPSIEVAVVDISV--SRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKH 75 (362)
Q Consensus 2 mkI~VIGl----G~~G~~lA~~la~~~~G~~V~~~d~~~--~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a 75 (362)
.+|+|||+ |.||..++.+|.+. ||+|+.+|.+. +.+ ..+.+..+++++
T Consensus 14 ~~IavIGas~~~g~~G~~~~~~L~~~--G~~v~~vnp~~~g~~i------------------------~G~~~~~sl~el 67 (145)
T 2duw_A 14 RTIALVGASDKPDRPSYRVMKYLLDQ--GYHVIPVSPKVAGKTL------------------------LGQQGYATLADV 67 (145)
T ss_dssp CCEEEESCCSCTTSHHHHHHHHHHHH--TCCEEEECSSSTTSEE------------------------TTEECCSSTTTC
T ss_pred CEEEEECcCCCCCChHHHHHHHHHHC--CCEEEEeCCccccccc------------------------CCeeccCCHHHc
Confidence 47999999 89999999999998 89977766643 111 125566677776
Q ss_pred hcCCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhc
Q 017997 76 VSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHN 144 (362)
Q Consensus 76 ~~~aDvVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~ 144 (362)
...+|++++|+|.+ .+.++++++.+ ...+.+++..||. .+++.+.+++.
T Consensus 68 ~~~~Dlvii~vp~~---------------~v~~v~~~~~~-~g~~~i~i~~~~~----~~~l~~~a~~~ 116 (145)
T 2duw_A 68 PEKVDMVDVFRNSE---------------AAWGVAQEAIA-IGAKTLWLQLGVI----NEQAAVLAREA 116 (145)
T ss_dssp SSCCSEEECCSCST---------------HHHHHHHHHHH-HTCCEEECCTTCC----CHHHHHHHHTT
T ss_pred CCCCCEEEEEeCHH---------------HHHHHHHHHHH-cCCCEEEEcCChH----HHHHHHHHHHc
Confidence 67899999999832 35677777666 3455666654433 45666666654
No 186
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=98.36 E-value=2.3e-06 Score=80.42 Aligned_cols=70 Identities=14% Similarity=0.230 Sum_probs=53.1
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeE-EEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhc--C
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEV-AVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS--E 78 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V-~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~--~ 78 (362)
+||+|||+|.||..++..|.++.+++++ .++|+++++.+.+.+.. +...+.+|++++++ +
T Consensus 9 ~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~-----------------g~~~~~~~~~~~l~~~~ 71 (346)
T 3cea_A 9 LRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNEL-----------------GVETTYTNYKDMIDTEN 71 (346)
T ss_dssp EEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTT-----------------CCSEEESCHHHHHTTSC
T ss_pred ceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHh-----------------CCCcccCCHHHHhcCCC
Confidence 6999999999999999998822247775 57899999988765420 11145678888775 6
Q ss_pred CcEEEEeccC
Q 017997 79 ADIVFVSVNT 88 (362)
Q Consensus 79 aDvVii~vpt 88 (362)
+|+|++|+|+
T Consensus 72 ~D~V~i~tp~ 81 (346)
T 3cea_A 72 IDAIFIVAPT 81 (346)
T ss_dssp CSEEEECSCG
T ss_pred CCEEEEeCCh
Confidence 9999999874
No 187
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=98.33 E-value=2.5e-06 Score=80.83 Aligned_cols=68 Identities=19% Similarity=0.283 Sum_probs=52.4
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhc--C
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVA-VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS--E 78 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~-~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~--~ 78 (362)
+||+|||+|.||...+..|.+. ++++|+ ++|+++++.+...+- ++...+|+++.++ +
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~-~~~~l~av~d~~~~~~~~a~~~-------------------g~~~~~~~~~ll~~~~ 65 (359)
T 3e18_A 6 YQLVIVGYGGMGSYHVTLASAA-DNLEVHGVFDILAEKREAAAQK-------------------GLKIYESYEAVLADEK 65 (359)
T ss_dssp EEEEEECCSHHHHHHHHHHHTS-TTEEEEEEECSSHHHHHHHHTT-------------------TCCBCSCHHHHHHCTT
T ss_pred CcEEEECcCHHHHHHHHHHHhC-CCcEEEEEEcCCHHHHHHHHhc-------------------CCceeCCHHHHhcCCC
Confidence 4799999999999999888765 477876 569999987754331 1345678888776 7
Q ss_pred CcEEEEeccCC
Q 017997 79 ADIVFVSVNTP 89 (362)
Q Consensus 79 aDvVii~vptp 89 (362)
.|+|++|+|+.
T Consensus 66 ~D~V~i~tp~~ 76 (359)
T 3e18_A 66 VDAVLIATPND 76 (359)
T ss_dssp CCEEEECSCGG
T ss_pred CCEEEEcCCcH
Confidence 89999998753
No 188
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=98.33 E-value=1.4e-06 Score=81.21 Aligned_cols=70 Identities=21% Similarity=0.268 Sum_probs=49.7
Q ss_pred CceEEEEcCChhHHH-HHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhh-cC
Q 017997 1 MVKICCIGAGYVGGP-TMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHV-SE 78 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~-lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~-~~ 78 (362)
+|||+|||+|.||.. ++..|.+. ++++|+++|+++++.+.+.+.. +.-....+..+.+ .+
T Consensus 2 ~~~igiIG~G~ig~~~~~~~l~~~-~~~~l~v~d~~~~~~~~~a~~~-----------------g~~~~~~~~~~~l~~~ 63 (323)
T 1xea_A 2 SLKIAMIGLGDIAQKAYLPVLAQW-PDIELVLCTRNPKVLGTLATRY-----------------RVSATCTDYRDVLQYG 63 (323)
T ss_dssp CEEEEEECCCHHHHHTHHHHHTTS-TTEEEEEECSCHHHHHHHHHHT-----------------TCCCCCSSTTGGGGGC
T ss_pred CcEEEEECCCHHHHHHHHHHHHhC-CCceEEEEeCCHHHHHHHHHHc-----------------CCCccccCHHHHhhcC
Confidence 369999999999984 88888764 3788889999999988775421 0001022333345 68
Q ss_pred CcEEEEeccC
Q 017997 79 ADIVFVSVNT 88 (362)
Q Consensus 79 aDvVii~vpt 88 (362)
+|+|++|+|+
T Consensus 64 ~D~V~i~tp~ 73 (323)
T 1xea_A 64 VDAVMIHAAT 73 (323)
T ss_dssp CSEEEECSCG
T ss_pred CCEEEEECCc
Confidence 9999999874
No 189
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=98.32 E-value=2.3e-06 Score=69.28 Aligned_cols=41 Identities=32% Similarity=0.486 Sum_probs=37.2
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHc
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNS 44 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~ 44 (362)
++|.|+|+|.+|..++..|.+. |++|+++|+++++++.+.+
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~--g~~v~~~d~~~~~~~~~~~ 47 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRM--GHEVLAVDINEEKVNAYAS 47 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT--TCCCEEEESCHHHHHTTTT
T ss_pred CcEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH
Confidence 4699999999999999999998 8999999999998877654
No 190
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=98.31 E-value=2.1e-06 Score=81.32 Aligned_cols=71 Identities=20% Similarity=0.309 Sum_probs=55.1
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCC-CEEEecCHHhhhc--
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVA-VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGK-NLFFSTDVEKHVS-- 77 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~-~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~-~l~~t~d~~~a~~-- 77 (362)
+||+|||+|.||..++..|.+..++++++ ++|+++++.+.+.+.. + .....+|++++++
T Consensus 24 ~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~-----------------g~~~~~~~~~~~ll~~~ 86 (357)
T 3ec7_A 24 LKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDIVAGRAQAALDKY-----------------AIEAKDYNDYHDLINDK 86 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECSSTTHHHHHHHHH-----------------TCCCEEESSHHHHHHCT
T ss_pred eeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHh-----------------CCCCeeeCCHHHHhcCC
Confidence 58999999999999999998433478876 6899999888765420 1 1456788888776
Q ss_pred CCcEEEEeccCC
Q 017997 78 EADIVFVSVNTP 89 (362)
Q Consensus 78 ~aDvVii~vptp 89 (362)
+.|+|++|+|+.
T Consensus 87 ~~D~V~i~tp~~ 98 (357)
T 3ec7_A 87 DVEVVIITASNE 98 (357)
T ss_dssp TCCEEEECSCGG
T ss_pred CCCEEEEcCCcH
Confidence 589999998753
No 191
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=98.31 E-value=1.9e-06 Score=76.92 Aligned_cols=107 Identities=16% Similarity=0.135 Sum_probs=65.8
Q ss_pred CceEEEEcCChhHHHHHHHHHHcCCCCeEEE-EeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCC
Q 017997 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAV-VDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEA 79 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~la~~~~G~~V~~-~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~a 79 (362)
||||+|+|+|.||..++..+.+. ++++++ +|++++. . ..+..++|+++.+ ++
T Consensus 3 MmkI~ViGaGrMG~~i~~~l~~~--~~eLva~~d~~~~~-----~-------------------~gv~v~~dl~~l~-~~ 55 (243)
T 3qy9_A 3 SMKILLIGYGAMNQRVARLAEEK--GHEIVGVIENTPKA-----T-------------------TPYQQYQHIADVK-GA 55 (243)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEEECSSCC--------------------------CCSCBCSCTTTCT-TC
T ss_pred ceEEEEECcCHHHHHHHHHHHhC--CCEEEEEEecCccc-----c-------------------CCCceeCCHHHHh-CC
Confidence 68999999999999999999887 457665 7887541 0 1234557777766 99
Q ss_pred cEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhccCCCceEEeeCCccc
Q 017997 80 DIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEFL 159 (362)
Q Consensus 80 DvVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~~ 159 (362)
|++|-++. | ..+.+.+ + +..+.-+|+.+| |.++.-.+.+.+.. ....++++|.|.
T Consensus 56 DVvIDft~-p-----------------~a~~~~~-~-l~~g~~vVigTT---G~s~e~~~~l~~aa--~~~~v~~a~N~S 110 (243)
T 3qy9_A 56 DVAIDFSN-P-----------------NLLFPLL-D-EDFHLPLVVATT---GEKEKLLNKLDELS--QNMPVFFSANMS 110 (243)
T ss_dssp SEEEECSC-H-----------------HHHHHHH-T-SCCCCCEEECCC---SSHHHHHHHHHHHT--TTSEEEECSSCC
T ss_pred CEEEEeCC-h-----------------HHHHHHH-H-HhcCCceEeCCC---CCCHHHHHHHHHHH--hcCCEEEECCcc
Confidence 99985532 2 1222333 3 666666665554 33332223333332 124678888765
No 192
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=98.30 E-value=2.9e-06 Score=80.11 Aligned_cols=69 Identities=13% Similarity=0.202 Sum_probs=53.4
Q ss_pred ceEEEEcCChhHH-HHHHHHHHcCCCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhc--
Q 017997 2 VKICCIGAGYVGG-PTMAVIALKCPSIEVA-VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS-- 77 (362)
Q Consensus 2 mkI~VIGlG~~G~-~lA~~la~~~~G~~V~-~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~-- 77 (362)
+||+|||+|.||. .++..|.+. ++++|+ ++|+++++.+++.+. -++...+|++++++
T Consensus 28 ~rigiIG~G~~g~~~~~~~l~~~-~~~~l~av~d~~~~~~~~~a~~------------------~g~~~~~~~~~ll~~~ 88 (350)
T 3rc1_A 28 IRVGVIGCADIAWRRALPALEAE-PLTEVTAIASRRWDRAKRFTER------------------FGGEPVEGYPALLERD 88 (350)
T ss_dssp EEEEEESCCHHHHHTHHHHHHHC-TTEEEEEEEESSHHHHHHHHHH------------------HCSEEEESHHHHHTCT
T ss_pred eEEEEEcCcHHHHHHHHHHHHhC-CCeEEEEEEcCCHHHHHHHHHH------------------cCCCCcCCHHHHhcCC
Confidence 5899999999998 788888875 478876 679999988876541 01334478888775
Q ss_pred CCcEEEEeccCC
Q 017997 78 EADIVFVSVNTP 89 (362)
Q Consensus 78 ~aDvVii~vptp 89 (362)
+.|+|++|+|+.
T Consensus 89 ~~D~V~i~tp~~ 100 (350)
T 3rc1_A 89 DVDAVYVPLPAV 100 (350)
T ss_dssp TCSEEEECCCGG
T ss_pred CCCEEEECCCcH
Confidence 589999998753
No 193
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=98.30 E-value=6e-06 Score=76.34 Aligned_cols=117 Identities=22% Similarity=0.299 Sum_probs=73.1
Q ss_pred ceEEEEc-CChhHHHHHHHHHHcCCCC--eEEEEeC--CHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhh
Q 017997 2 VKICCIG-AGYVGGPTMAVIALKCPSI--EVAVVDI--SVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHV 76 (362)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~la~~~~G~--~V~~~d~--~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~ 76 (362)
|||+|+| +|.+|.+++..|+.. |+ ++.++|+ ++++++.... .+.+... .....+++.+..+++
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~--~~~~el~L~Di~~~~~~~~~~~~--------dl~~~~~--~~~~~~v~~~~~~a~ 68 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALR--DIADEVVFVDIPDKEDDTVGQAA--------DTNHGIA--YDSNTRVRQGGYEDT 68 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCCSEEEEECCGGGHHHHHHHHH--------HHHHHHT--TTCCCEEEECCGGGG
T ss_pred CEEEEECCCChHHHHHHHHHHhC--CCCCEEEEEcCCCChhhHHHHHH--------HHHHHHh--hCCCcEEEeCCHHHh
Confidence 7999999 999999999999987 54 7999999 8877653221 1111110 012233332335569
Q ss_pred cCCcEEEEeccCCCCCCCCCCCCCCC-----hHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHH
Q 017997 77 SEADIVFVSVNTPTKTQGLGAGKAAD-----LTYWESAARVIADVSKSDKIVVEKSTVPVKTAEA 136 (362)
Q Consensus 77 ~~aDvVii~vptp~~~~g~~~~~~~d-----~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~ 136 (362)
+++|+||++.+.|... |. + ..| ...+++.++.+.++ .++.+|++ +|.|.++.-.
T Consensus 69 ~~aDvVi~~ag~~~~~-g~--~-r~dl~~~N~~i~~~i~~~i~~~-~p~~~viv-~SNPv~~~~~ 127 (303)
T 1o6z_A 69 AGSDVVVITAGIPRQP-GQ--T-RIDLAGDNAPIMEDIQSSLDEH-NDDYISLT-TSNPVDLLNR 127 (303)
T ss_dssp TTCSEEEECCCCCCCT-TC--C-HHHHHHHHHHHHHHHHHHHHTT-CSCCEEEE-CCSSHHHHHH
T ss_pred CCCCEEEEcCCCCCCC-CC--C-HHHHHHHHHHHHHHHHHHHHHH-CCCcEEEE-eCChHHHHHH
Confidence 9999999998876432 10 0 111 13445555666665 45666655 6888876543
No 194
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=98.29 E-value=1.9e-06 Score=84.03 Aligned_cols=98 Identities=11% Similarity=0.058 Sum_probs=72.7
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHH-HHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCc
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRI-NAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~-~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (362)
++|+|||+|.||..+|..+... |.+|++||+++.+. +....+ +.. .+++++++.+|
T Consensus 258 ktVgIIG~G~IG~~vA~~l~~~--G~~Viv~d~~~~~~~~a~~~g--------------------~~~-~~l~ell~~aD 314 (479)
T 1v8b_A 258 KIVVICGYGDVGKGCASSMKGL--GARVYITEIDPICAIQAVMEG--------------------FNV-VTLDEIVDKGD 314 (479)
T ss_dssp SEEEEECCSHHHHHHHHHHHHH--TCEEEEECSCHHHHHHHHTTT--------------------CEE-CCHHHHTTTCS
T ss_pred CEEEEEeeCHHHHHHHHHHHhC--cCEEEEEeCChhhHHHHHHcC--------------------CEe-cCHHHHHhcCC
Confidence 5899999999999999999988 99999999999875 333221 232 46788899999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccc-cHHHHHH
Q 017997 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVK-TAEAIEK 139 (362)
Q Consensus 81 vVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~g-t~~~l~~ 139 (362)
+|++++.++. -.+ +...+.++++.+|++.+..++. ..+.+.+
T Consensus 315 iVi~~~~t~~---------lI~--------~~~l~~MK~gailiNvgrg~~EId~~aL~~ 357 (479)
T 1v8b_A 315 FFITCTGNVD---------VIK--------LEHLLKMKNNAVVGNIGHFDDEIQVNELFN 357 (479)
T ss_dssp EEEECCSSSS---------SBC--------HHHHTTCCTTCEEEECSSTTTSBCHHHHHT
T ss_pred EEEECCChhh---------hcC--------HHHHhhcCCCcEEEEeCCCCccccchhhhc
Confidence 9999964431 111 2344668999999998887663 4555544
No 195
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=98.29 E-value=3.2e-06 Score=78.99 Aligned_cols=68 Identities=25% Similarity=0.246 Sum_probs=51.5
Q ss_pred ceEEEEcCChhHHHH-HHHHHHcCCCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhc--
Q 017997 2 VKICCIGAGYVGGPT-MAVIALKCPSIEVA-VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS-- 77 (362)
Q Consensus 2 mkI~VIGlG~~G~~l-A~~la~~~~G~~V~-~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~-- 77 (362)
|||+|||+|.||..+ +..|.+. +++++ ++|+++++.+.+.+.. +.....+|++++++
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~~~--~~~~vav~d~~~~~~~~~~~~~-----------------g~~~~~~~~~~~l~~~ 61 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIRAT--GGEVVSMMSTSAERGAAYATEN-----------------GIGKSVTSVEELVGDP 61 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHHHT--TCEEEEEECSCHHHHHHHHHHT-----------------TCSCCBSCHHHHHTCT
T ss_pred CeEEEEcccHHHHHhhhHHhhcC--CCeEEEEECCCHHHHHHHHHHc-----------------CCCcccCCHHHHhcCC
Confidence 699999999999998 7777774 88876 7899999988765420 11123567777665
Q ss_pred CCcEEEEeccC
Q 017997 78 EADIVFVSVNT 88 (362)
Q Consensus 78 ~aDvVii~vpt 88 (362)
++|+|++|+|+
T Consensus 62 ~~D~V~i~tp~ 72 (332)
T 2glx_A 62 DVDAVYVSTTN 72 (332)
T ss_dssp TCCEEEECSCG
T ss_pred CCCEEEEeCCh
Confidence 59999999874
No 196
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=98.28 E-value=2.6e-06 Score=80.73 Aligned_cols=69 Identities=13% Similarity=0.151 Sum_probs=53.2
Q ss_pred ceEEEEcCChhHHH-HHHHHHHcCCCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhc--
Q 017997 2 VKICCIGAGYVGGP-TMAVIALKCPSIEVA-VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS-- 77 (362)
Q Consensus 2 mkI~VIGlG~~G~~-lA~~la~~~~G~~V~-~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~-- 77 (362)
+||+|||+|.||.. ++..|.+. ++.+|+ ++|+++++.+.+.+.. +.....+|++++++
T Consensus 6 ~rigiIG~G~~g~~~~~~~l~~~-~~~~l~av~d~~~~~~~~~a~~~-----------------~~~~~~~~~~~ll~~~ 67 (359)
T 3m2t_A 6 IKVGLVGIGAQMQENLLPSLLQM-QDIRIVAACDSDLERARRVHRFI-----------------SDIPVLDNVPAMLNQV 67 (359)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTC-TTEEEEEEECSSHHHHGGGGGTS-----------------CSCCEESSHHHHHHHS
T ss_pred ceEEEECCCHHHHHHHHHHHHhC-CCcEEEEEEcCCHHHHHHHHHhc-----------------CCCcccCCHHHHhcCC
Confidence 48999999999985 78888765 477876 7799999988776531 12345688888776
Q ss_pred CCcEEEEeccC
Q 017997 78 EADIVFVSVNT 88 (362)
Q Consensus 78 ~aDvVii~vpt 88 (362)
+.|+|++|+|+
T Consensus 68 ~vD~V~i~tp~ 78 (359)
T 3m2t_A 68 PLDAVVMAGPP 78 (359)
T ss_dssp CCSEEEECSCH
T ss_pred CCCEEEEcCCc
Confidence 45999999874
No 197
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=98.28 E-value=1.5e-06 Score=82.33 Aligned_cols=115 Identities=16% Similarity=0.170 Sum_probs=71.4
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCC-----hHHHHhhhcCC-CEEEecCHHhh
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPG-----LDGVVKQCRGK-NLFFSTDVEKH 75 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~-----l~~~~~~~~~~-~l~~t~d~~~a 75 (362)
.||+|||+|.+|..+|..+... |.+|+++|+++++.+.+.+-+..+.+.. ...+.+..... ......+++++
T Consensus 185 ~kV~ViG~G~iG~~aa~~a~~l--Ga~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e~ 262 (381)
T 3p2y_A 185 ASALVLGVGVAGLQALATAKRL--GAKTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALEDA 262 (381)
T ss_dssp CEEEEESCSHHHHHHHHHHHHH--TCEEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHHHH
T ss_pred CEEEEECchHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHHHH
Confidence 4899999999999999999888 8999999999999888775222111100 00000000000 00002346677
Q ss_pred hcCCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCc
Q 017997 76 VSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVP 130 (362)
Q Consensus 76 ~~~aDvVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~ 130 (362)
++++|+||.|+..|... .+.+ +.+++.+.++++.+||+.|.-+
T Consensus 263 l~~aDIVI~tv~iPg~~-------ap~L-----vt~emv~~MkpGsVIVDvA~d~ 305 (381)
T 3p2y_A 263 ITKFDIVITTALVPGRP-------APRL-----VTAAAATGMQPGSVVVDLAGET 305 (381)
T ss_dssp HTTCSEEEECCCCTTSC-------CCCC-----BCHHHHHTSCTTCEEEETTGGG
T ss_pred HhcCCEEEECCCCCCcc-------ccee-----ecHHHHhcCCCCcEEEEEeCCC
Confidence 89999999997554321 1211 1245667789999999865433
No 198
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=98.26 E-value=1.5e-06 Score=82.94 Aligned_cols=113 Identities=20% Similarity=0.227 Sum_probs=71.4
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCE-E-E--------ecC
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNL-F-F--------STD 71 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l-~-~--------t~d 71 (362)
.||+|||+|.+|..+|..+... |.+|+++|+++++.+.+.+-...+.+....+.-.....+.. + . ..+
T Consensus 191 ~kV~ViG~G~iG~~aa~~a~~l--Ga~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~~ 268 (405)
T 4dio_A 191 AKIFVMGAGVAGLQAIATARRL--GAVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAAL 268 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHHH
T ss_pred CEEEEECCcHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHhH
Confidence 4899999999999999999888 89999999999988877653222111100000000000000 0 0 124
Q ss_pred HHhhhcCCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeC
Q 017997 72 VEKHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKST 128 (362)
Q Consensus 72 ~~~a~~~aDvVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~ST 128 (362)
++++++++|+||.|+..|... .+.+ +.+++.+.++++.+||+.|.
T Consensus 269 l~e~l~~aDVVI~tvlipg~~-------ap~L-----vt~emv~~Mk~GsVIVDvA~ 313 (405)
T 4dio_A 269 VAEHIAKQDIVITTALIPGRP-------APRL-----VTREMLDSMKPGSVVVDLAV 313 (405)
T ss_dssp HHHHHHTCSEEEECCCCSSSC-------CCCC-----BCHHHHTTSCTTCEEEETTG
T ss_pred HHHHhcCCCEEEECCcCCCCC-------CCEE-----ecHHHHhcCCCCCEEEEEeC
Confidence 677789999999997555322 2221 13466778899999998654
No 199
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=98.26 E-value=2.1e-06 Score=79.84 Aligned_cols=69 Identities=14% Similarity=0.218 Sum_probs=50.6
Q ss_pred ceEEEEcCChhHHH-HHHHHHHcCCCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCC
Q 017997 2 VKICCIGAGYVGGP-TMAVIALKCPSIEVA-VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEA 79 (362)
Q Consensus 2 mkI~VIGlG~~G~~-lA~~la~~~~G~~V~-~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~a 79 (362)
|||+|||+|.||.. ++..|.+. ++++++ ++|+++++.+.+.+.. ++.+++++++...++
T Consensus 6 ~~vgiiG~G~~g~~~~~~~l~~~-~~~~lvav~d~~~~~~~~~~~~~------------------g~~~~~~~~~l~~~~ 66 (319)
T 1tlt_A 6 LRIGVVGLGGIAQKAWLPVLAAA-SDWTLQGAWSPTRAKALPICESW------------------RIPYADSLSSLAASC 66 (319)
T ss_dssp EEEEEECCSTHHHHTHHHHHHSC-SSEEEEEEECSSCTTHHHHHHHH------------------TCCBCSSHHHHHTTC
T ss_pred ceEEEECCCHHHHHHHHHHHHhC-CCeEEEEEECCCHHHHHHHHHHc------------------CCCccCcHHHhhcCC
Confidence 58999999999996 88878754 377876 8899998887665410 112456666544689
Q ss_pred cEEEEeccCC
Q 017997 80 DIVFVSVNTP 89 (362)
Q Consensus 80 DvVii~vptp 89 (362)
|+|++|+|+.
T Consensus 67 D~V~i~tp~~ 76 (319)
T 1tlt_A 67 DAVFVHSSTA 76 (319)
T ss_dssp SEEEECSCTT
T ss_pred CEEEEeCCch
Confidence 9999998753
No 200
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=98.26 E-value=1.2e-06 Score=81.84 Aligned_cols=98 Identities=12% Similarity=0.072 Sum_probs=71.5
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcE
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (362)
++|+|||+|.+|..++..|++..+..+|.+|||++++.+++.+. +.. ..-.+. .+++++++ ++|+
T Consensus 126 ~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~~~~a~~la~~------------~~~-~~~~~~-~~~~~e~v-~aDv 190 (322)
T 1omo_A 126 SVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSY------------CED-RGISAS-VQPAEEAS-RCDV 190 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHH------------HHH-TTCCEE-ECCHHHHT-SSSE
T ss_pred CEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHH------------HHh-cCceEE-ECCHHHHh-CCCE
Confidence 58999999999999999998743367999999999999887642 000 001245 67888888 9999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCcccc
Q 017997 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKT 133 (362)
Q Consensus 82 Vii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt 133 (362)
|++|+|+... -+. ...+++++.|+..++..|+.
T Consensus 191 Vi~aTp~~~p----------v~~---------~~~l~~G~~V~~ig~~~p~~ 223 (322)
T 1omo_A 191 LVTTTPSRKP----------VVK---------AEWVEEGTHINAIGADGPGK 223 (322)
T ss_dssp EEECCCCSSC----------CBC---------GGGCCTTCEEEECSCCSTTC
T ss_pred EEEeeCCCCc----------eec---------HHHcCCCeEEEECCCCCCCc
Confidence 9999875321 110 14578899998887776664
No 201
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=98.26 E-value=3.9e-06 Score=73.58 Aligned_cols=41 Identities=10% Similarity=0.115 Sum_probs=38.6
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHc
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNS 44 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~ 44 (362)
|||.|+|+|.+|..+|..|.+. |++|+++|+|+++++.+.+
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~--g~~v~vid~~~~~~~~l~~ 41 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSR--KYGVVIINKDRELCEEFAK 41 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHT--TCCEEEEESCHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHH
Confidence 7999999999999999999998 9999999999999998764
No 202
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=98.26 E-value=1.9e-06 Score=84.39 Aligned_cols=90 Identities=16% Similarity=0.075 Sum_probs=68.0
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHH-HHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCc
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRI-NAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~-~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (362)
++|+|||+|.||..+|..+... |.+|++||+++.+. +....| ... .+++++++.+|
T Consensus 278 ktVgIIG~G~IG~~vA~~l~~~--G~~V~v~d~~~~~~~~a~~~G--------------------~~~-~~l~ell~~aD 334 (494)
T 3d64_A 278 KIAVVAGYGDVGKGCAQSLRGL--GATVWVTEIDPICALQAAMEG--------------------YRV-VTMEYAADKAD 334 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT--TCEEEEECSCHHHHHHHHTTT--------------------CEE-CCHHHHTTTCS
T ss_pred CEEEEEccCHHHHHHHHHHHHC--CCEEEEEeCChHhHHHHHHcC--------------------CEe-CCHHHHHhcCC
Confidence 5899999999999999999877 99999999998764 222211 232 36788899999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCcc
Q 017997 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPV 131 (362)
Q Consensus 81 vVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~ 131 (362)
+|++++.++. -.+ +...+.++++.+|++.+..++
T Consensus 335 iVi~~~~t~~---------lI~--------~~~l~~MK~gAilINvgrg~v 368 (494)
T 3d64_A 335 IFVTATGNYH---------VIN--------HDHMKAMRHNAIVCNIGHFDS 368 (494)
T ss_dssp EEEECSSSSC---------SBC--------HHHHHHCCTTEEEEECSSSSC
T ss_pred EEEECCCccc---------ccC--------HHHHhhCCCCcEEEEcCCCcc
Confidence 9999985432 111 234556899999999888655
No 203
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=98.25 E-value=1.1e-06 Score=82.64 Aligned_cols=71 Identities=14% Similarity=0.180 Sum_probs=49.5
Q ss_pred CceEEEEcCChhHHHHHHH-HHHcCCCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcC
Q 017997 1 MVKICCIGAGYVGGPTMAV-IALKCPSIEVA-VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSE 78 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~-la~~~~G~~V~-~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~ 78 (362)
|+||+|||+|.||..+... +....++++|+ ++|+++++.+...+ .......+|+++.+++
T Consensus 2 ~~rvgiiG~G~~g~~~~~~~~~~~~~~~~l~av~d~~~~~~~~~~~------------------~~~~~~~~~~~~ll~~ 63 (345)
T 3f4l_A 2 VINCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQAPI------------------YSHIHFTSDLDEVLND 63 (345)
T ss_dssp CEEEEEECCSHHHHHHTHHHHTTCTTTEEEEEEECSSCCGGGGSGG------------------GTTCEEESCTHHHHTC
T ss_pred ceEEEEEecCHHHHHHHHHHHHhcCCCeEEEEEEcCCHhHHHHHHh------------------cCCCceECCHHHHhcC
Confidence 4699999999999864333 43333578877 77998776532221 1235677889887765
Q ss_pred --CcEEEEeccCC
Q 017997 79 --ADIVFVSVNTP 89 (362)
Q Consensus 79 --aDvVii~vptp 89 (362)
.|+|++|+|+.
T Consensus 64 ~~~D~V~i~tp~~ 76 (345)
T 3f4l_A 64 PDVKLVVVCTHAD 76 (345)
T ss_dssp TTEEEEEECSCGG
T ss_pred CCCCEEEEcCChH
Confidence 89999998753
No 204
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=98.25 E-value=8.4e-06 Score=77.17 Aligned_cols=73 Identities=18% Similarity=0.295 Sum_probs=54.0
Q ss_pred CceEEEEcCChhHHHHHHHHHHcCCCCeE-EEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhc--
Q 017997 1 MVKICCIGAGYVGGPTMAVIALKCPSIEV-AVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS-- 77 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~la~~~~G~~V-~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~-- 77 (362)
+|||+|||+|.||..++..|.+. +++++ .++|+++++.+.+.+... + .......+|++++++
T Consensus 6 ~~~vgiiG~G~ig~~~~~~l~~~-~~~~lv~v~d~~~~~~~~~a~~~~-~-------------~~~~~~~~~~~~ll~~~ 70 (362)
T 1ydw_A 6 QIRIGVMGCADIARKVSRAIHLA-PNATISGVASRSLEKAKAFATANN-Y-------------PESTKIHGSYESLLEDP 70 (362)
T ss_dssp CEEEEEESCCTTHHHHHHHHHHC-TTEEEEEEECSSHHHHHHHHHHTT-C-------------CTTCEEESSHHHHHHCT
T ss_pred ceEEEEECchHHHHHHHHHHhhC-CCcEEEEEEcCCHHHHHHHHHHhC-C-------------CCCCeeeCCHHHHhcCC
Confidence 36999999999999999988875 36666 578999998877654210 0 002356678888775
Q ss_pred CCcEEEEeccC
Q 017997 78 EADIVFVSVNT 88 (362)
Q Consensus 78 ~aDvVii~vpt 88 (362)
++|+|++|+|+
T Consensus 71 ~~D~V~i~tp~ 81 (362)
T 1ydw_A 71 EIDALYVPLPT 81 (362)
T ss_dssp TCCEEEECCCG
T ss_pred CCCEEEEcCCh
Confidence 59999999874
No 205
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.24 E-value=2.5e-06 Score=72.59 Aligned_cols=72 Identities=10% Similarity=0.140 Sum_probs=51.1
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCC-C-CCChHHHHhhhcCCCEEEecCHHhh--hc
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPI-Y-EPGLDGVVKQCRGKNLFFSTDVEKH--VS 77 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~-~-e~~l~~~~~~~~~~~l~~t~d~~~a--~~ 77 (362)
++|.|+|+|.||..+|..|.+.+ |++|+++|+++++++.+.+..... . +..-. +.+.++ +.
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~-g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~--------------~~l~~~~~~~ 104 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARY-GKISLGIEIREEAAQQHRSEGRNVISGDATDP--------------DFWERILDTG 104 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHH-CSCEEEEESCHHHHHHHHHTTCCEEECCTTCH--------------HHHHTBCSCC
T ss_pred CcEEEECCCHHHHHHHHHHHhcc-CCeEEEEECCHHHHHHHHHCCCCEEEcCCCCH--------------HHHHhccCCC
Confidence 48999999999999999998741 589999999999998887532211 1 10000 012232 56
Q ss_pred CCcEEEEeccC
Q 017997 78 EADIVFVSVNT 88 (362)
Q Consensus 78 ~aDvVii~vpt 88 (362)
++|+||+|+|.
T Consensus 105 ~ad~vi~~~~~ 115 (183)
T 3c85_A 105 HVKLVLLAMPH 115 (183)
T ss_dssp CCCEEEECCSS
T ss_pred CCCEEEEeCCC
Confidence 89999999874
No 206
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=98.24 E-value=4.9e-06 Score=78.33 Aligned_cols=71 Identities=14% Similarity=0.183 Sum_probs=52.7
Q ss_pred CceEEEEcCChhHHH-HHHHHHHcCCCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhc-
Q 017997 1 MVKICCIGAGYVGGP-TMAVIALKCPSIEVA-VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS- 77 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~-lA~~la~~~~G~~V~-~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~- 77 (362)
|+||||||+|.||.. ++..+.+. ++.+|+ ++|+++++.+++.+.. +.-++.+|+++.++
T Consensus 23 mirigiIG~G~ig~~~~~~~~~~~-~~~~lvav~d~~~~~a~~~a~~~-----------------g~~~~y~d~~ell~~ 84 (350)
T 4had_A 23 MLRFGIISTAKIGRDNVVPAIQDA-ENCVVTAIASRDLTRAREMADRF-----------------SVPHAFGSYEEMLAS 84 (350)
T ss_dssp CEEEEEESCCHHHHHTHHHHHHHC-SSEEEEEEECSSHHHHHHHHHHH-----------------TCSEEESSHHHHHHC
T ss_pred ccEEEEEcChHHHHHHHHHHHHhC-CCeEEEEEECCCHHHHHHHHHHc-----------------CCCeeeCCHHHHhcC
Confidence 679999999999975 45566554 477876 5799999988876520 11256788988774
Q ss_pred -CCcEEEEeccCC
Q 017997 78 -EADIVFVSVNTP 89 (362)
Q Consensus 78 -~aDvVii~vptp 89 (362)
+.|+|+||+|++
T Consensus 85 ~~iDaV~I~tP~~ 97 (350)
T 4had_A 85 DVIDAVYIPLPTS 97 (350)
T ss_dssp SSCSEEEECSCGG
T ss_pred CCCCEEEEeCCCc
Confidence 589999998754
No 207
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=98.23 E-value=2.8e-06 Score=79.45 Aligned_cols=70 Identities=14% Similarity=0.167 Sum_probs=50.7
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhc--C
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVA-VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS--E 78 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~-~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~--~ 78 (362)
+||+|||+|.||..++..|.+. ++.+++ ++|+++++.+.+.+.. +.-...+|+++.++ +
T Consensus 6 ~rigiiG~G~ig~~~~~~l~~~-~~~~~~av~d~~~~~~~~~a~~~-----------------~~~~~~~~~~~ll~~~~ 67 (329)
T 3evn_A 6 VRYGVVSTAKVAPRFIEGVRLA-GNGEVVAVSSRTLESAQAFANKY-----------------HLPKAYDKLEDMLADES 67 (329)
T ss_dssp EEEEEEBCCTTHHHHHHHHHHH-CSEEEEEEECSCSSTTCC---CC-----------------CCSCEESCHHHHHTCTT
T ss_pred eEEEEEechHHHHHHHHHHHhC-CCcEEEEEEcCCHHHHHHHHHHc-----------------CCCcccCCHHHHhcCCC
Confidence 5899999999999999998876 256655 6699987765544310 11135678888777 7
Q ss_pred CcEEEEeccCC
Q 017997 79 ADIVFVSVNTP 89 (362)
Q Consensus 79 aDvVii~vptp 89 (362)
+|+|++|+|+.
T Consensus 68 ~D~V~i~tp~~ 78 (329)
T 3evn_A 68 IDVIYVATINQ 78 (329)
T ss_dssp CCEEEECSCGG
T ss_pred CCEEEECCCcH
Confidence 99999998753
No 208
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=98.21 E-value=7.9e-06 Score=77.48 Aligned_cols=67 Identities=21% Similarity=0.362 Sum_probs=50.0
Q ss_pred ceEEEEcCChhHHH-HHHHHHHcCCCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhc--
Q 017997 2 VKICCIGAGYVGGP-TMAVIALKCPSIEVA-VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS-- 77 (362)
Q Consensus 2 mkI~VIGlG~~G~~-lA~~la~~~~G~~V~-~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~-- 77 (362)
+||+|||+|.||.. .+..+.+. ++++|+ ++|++++++++-. +...+.+|+++.++
T Consensus 8 ~rvgiiG~G~~g~~~~~~~l~~~-~~~~l~av~d~~~~~~~~~~--------------------~~~~~~~~~~~ll~~~ 66 (364)
T 3e82_A 8 INIALIGYGFVGKTFHAPLIRSV-PGLNLAFVASRDEEKVKRDL--------------------PDVTVIASPEAAVQHP 66 (364)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTS-TTEEEEEEECSCHHHHHHHC--------------------TTSEEESCHHHHHTCT
T ss_pred ceEEEECCCHHHHHHHHHHHhhC-CCeEEEEEEcCCHHHHHhhC--------------------CCCcEECCHHHHhcCC
Confidence 58999999999987 56666554 478875 6799998765211 23466788998876
Q ss_pred CCcEEEEeccCC
Q 017997 78 EADIVFVSVNTP 89 (362)
Q Consensus 78 ~aDvVii~vptp 89 (362)
+.|+|++|+|+.
T Consensus 67 ~~D~V~i~tp~~ 78 (364)
T 3e82_A 67 DVDLVVIASPNA 78 (364)
T ss_dssp TCSEEEECSCGG
T ss_pred CCCEEEEeCChH
Confidence 789999998753
No 209
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=98.19 E-value=1.4e-05 Score=74.76 Aligned_cols=106 Identities=14% Similarity=0.217 Sum_probs=72.2
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcE
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (362)
+++||||+|.+|..+|..+..- |.+|++||+.+... ..+ ....+ .++++.+++||+
T Consensus 142 ~tvGIiG~G~IG~~va~~~~~f--g~~v~~~d~~~~~~--~~~-------------------~~~~~-~~l~ell~~sDi 197 (334)
T 3kb6_A 142 LTLGVIGTGRIGSRVAMYGLAF--GMKVLCYDVVKRED--LKE-------------------KGCVY-TSLDELLKESDV 197 (334)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCHH--HHH-------------------TTCEE-CCHHHHHHHCSE
T ss_pred cEEEEECcchHHHHHHHhhccc--CceeeecCCccchh--hhh-------------------cCcee-cCHHHHHhhCCE
Confidence 4799999999999999988877 99999999864321 111 11222 467888999999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhc
Q 017997 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHN 144 (362)
Q Consensus 82 Vii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~ 144 (362)
|.+++|-.....+ -.| +.....++++.++|+.|=-+.=..+.|.+.|++.
T Consensus 198 vslh~Plt~~T~~-----li~--------~~~l~~mk~~a~lIN~aRG~iVde~aL~~aL~~g 247 (334)
T 3kb6_A 198 ISLHVPYTKETHH-----MIN--------EERISLMKDGVYLINTARGKVVDTDALYRAYQRG 247 (334)
T ss_dssp EEECCCCCTTTTT-----CBC--------HHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTT
T ss_pred EEEcCCCChhhcc-----CcC--------HHHHhhcCCCeEEEecCccccccHHHHHHHHHhC
Confidence 9999874322211 222 2334568999999987653333345677777653
No 210
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=98.19 E-value=2e-06 Score=79.89 Aligned_cols=98 Identities=15% Similarity=0.110 Sum_probs=69.0
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcE
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (362)
.+|+|||+|.+|..++..|....+..+|.+||++ +.+++.+. ++......+... +++++++++|+
T Consensus 122 ~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~--~a~~la~~------------l~~~~g~~~~~~-~~~eav~~aDI 186 (313)
T 3hdj_A 122 SVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY--ASPEILER------------IGRRCGVPARMA-APADIAAQADI 186 (313)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT--CCHHHHHH------------HHHHHTSCEEEC-CHHHHHHHCSE
T ss_pred cEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc--HHHHHHHH------------HHHhcCCeEEEe-CHHHHHhhCCE
Confidence 4799999999999999999875446799999999 54444321 000001234556 88999999999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCcccc
Q 017997 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKT 133 (362)
Q Consensus 82 Vii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt 133 (362)
|+.|+|.+. +-+ . .+.++++++|+..++..|+.
T Consensus 187 Vi~aT~s~~----------pvl-------~--~~~l~~G~~V~~vGs~~p~~ 219 (313)
T 3hdj_A 187 VVTATRSTT----------PLF-------A--GQALRAGAFVGAIGSSLPHT 219 (313)
T ss_dssp EEECCCCSS----------CSS-------C--GGGCCTTCEEEECCCSSTTC
T ss_pred EEEccCCCC----------ccc-------C--HHHcCCCcEEEECCCCCCch
Confidence 999987531 111 1 24678999998877776664
No 211
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=98.16 E-value=6.3e-06 Score=77.19 Aligned_cols=69 Identities=13% Similarity=0.145 Sum_probs=51.6
Q ss_pred ceEEEEcCChhHH-HHHHHHHHcCCCCeE-EEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhc--
Q 017997 2 VKICCIGAGYVGG-PTMAVIALKCPSIEV-AVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS-- 77 (362)
Q Consensus 2 mkI~VIGlG~~G~-~lA~~la~~~~G~~V-~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~-- 77 (362)
+||+|||+|.+|. .++..|... +++| .++|+++++.+.+.+.. +...+.+|+++.++
T Consensus 5 ~rvgiiG~G~~~~~~~~~~l~~~--~~~lvav~d~~~~~~~~~a~~~-----------------~~~~~~~~~~~ll~~~ 65 (336)
T 2p2s_A 5 IRFAAIGLAHNHIYDMCQQLIDA--GAELAGVFESDSDNRAKFTSLF-----------------PSVPFAASAEQLITDA 65 (336)
T ss_dssp CEEEEECCSSTHHHHHHHHHHHT--TCEEEEEECSCTTSCHHHHHHS-----------------TTCCBCSCHHHHHTCT
T ss_pred cEEEEECCChHHHHHhhhhhcCC--CcEEEEEeCCCHHHHHHHHHhc-----------------CCCcccCCHHHHhhCC
Confidence 6999999999996 577777655 8885 57899998877765421 12345678888775
Q ss_pred CCcEEEEeccCC
Q 017997 78 EADIVFVSVNTP 89 (362)
Q Consensus 78 ~aDvVii~vptp 89 (362)
+.|+|+||+|+.
T Consensus 66 ~~D~V~i~tp~~ 77 (336)
T 2p2s_A 66 SIDLIACAVIPC 77 (336)
T ss_dssp TCCEEEECSCGG
T ss_pred CCCEEEEeCChh
Confidence 689999998753
No 212
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=98.14 E-value=1.8e-05 Score=73.31 Aligned_cols=115 Identities=20% Similarity=0.282 Sum_probs=72.4
Q ss_pred ceEEEEc-CChhHHHHHHHHHHc-CCCCeEEEEeCCHHHHH----HHHcCCCCCCCCChHHHHhhhcCCCEEE--ecCHH
Q 017997 2 VKICCIG-AGYVGGPTMAVIALK-CPSIEVAVVDISVSRIN----AWNSDQLPIYEPGLDGVVKQCRGKNLFF--STDVE 73 (362)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~la~~-~~G~~V~~~d~~~~~~~----~l~~~~~~~~e~~l~~~~~~~~~~~l~~--t~d~~ 73 (362)
|||+||| +|+||.++|..|+.. ....++.++|+++ +++ .++.. +. .-.++. +++..
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~--~~-------------~~~v~~~~~~~~~ 64 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHI--PT-------------AVKIKGFSGEDAT 64 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTS--CS-------------SEEEEEECSSCCH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCC--CC-------------CceEEEecCCCcH
Confidence 7999999 899999999999874 2246899999986 322 22221 00 012332 12444
Q ss_pred hhhcCCcEEEEeccCCCCCCCCCCCC----CCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHH
Q 017997 74 KHVSEADIVFVSVNTPTKTQGLGAGK----AADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAI 137 (362)
Q Consensus 74 ~a~~~aDvVii~vptp~~~~g~~~~~----~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l 137 (362)
+++++||+||++.+.|..+ |+ ++ ..+...+++..+.+.++. ++.++++- |.|..+.-.+
T Consensus 65 ~~~~~aDivii~ag~~rkp-G~--~R~dll~~N~~I~~~i~~~i~~~~-p~a~vlvv-tNPvd~~t~~ 127 (312)
T 3hhp_A 65 PALEGADVVLISAGVARKP-GM--DRSDLFNVNAGIVKNLVQQVAKTC-PKACIGII-TNPVNTTVAI 127 (312)
T ss_dssp HHHTTCSEEEECCSCSCCT-TC--CHHHHHHHHHHHHHHHHHHHHHHC-TTSEEEEC-SSCHHHHHHH
T ss_pred HHhCCCCEEEEeCCCCCCC-CC--CHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEEe-cCcchhHHHH
Confidence 5699999999999887543 21 11 113345566677777775 55555543 5677765443
No 213
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=98.14 E-value=4.8e-06 Score=81.76 Aligned_cols=90 Identities=18% Similarity=0.130 Sum_probs=67.4
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcE
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (362)
++|+|+|+|.||..+|..+... |++|+++|+++.+.+...+. + ... .+++++++++|+
T Consensus 275 ktV~IiG~G~IG~~~A~~lka~--Ga~Viv~d~~~~~~~~A~~~------------------G-a~~-~~l~e~l~~aDv 332 (494)
T 3ce6_A 275 KKVLICGYGDVGKGCAEAMKGQ--GARVSVTEIDPINALQAMME------------------G-FDV-VTVEEAIGDADI 332 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHT------------------T-CEE-CCHHHHGGGCSE
T ss_pred CEEEEEccCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHc------------------C-CEE-ecHHHHHhCCCE
Confidence 4899999999999999999888 89999999999887655431 1 222 356677889999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCc
Q 017997 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVP 130 (362)
Q Consensus 82 Vii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~ 130 (362)
||.|++++.. .+ .+..+.++++.+|++.+...
T Consensus 333 Vi~atgt~~~---------i~--------~~~l~~mk~ggilvnvG~~~ 364 (494)
T 3ce6_A 333 VVTATGNKDI---------IM--------LEHIKAMKDHAILGNIGHFD 364 (494)
T ss_dssp EEECSSSSCS---------BC--------HHHHHHSCTTCEEEECSSSG
T ss_pred EEECCCCHHH---------HH--------HHHHHhcCCCcEEEEeCCCC
Confidence 9999875421 11 13345578999998877654
No 214
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=98.13 E-value=8.5e-06 Score=76.23 Aligned_cols=71 Identities=15% Similarity=0.219 Sum_probs=52.3
Q ss_pred ceEEEEcCChhHHHHHHHHHHcC-CCCe-EEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhc--
Q 017997 2 VKICCIGAGYVGGPTMAVIALKC-PSIE-VAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS-- 77 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~-~G~~-V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~-- 77 (362)
+||+|||+|.||..++..|.+.. .+++ |.++|+++++.+.+.+.. +.-+..+|+++.++
T Consensus 3 ~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~~~~~a~~~a~~~-----------------~~~~~~~~~~~ll~~~ 65 (334)
T 3ohs_X 3 LRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQKH-----------------DIPKAYGSYEELAKDP 65 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECSSHHHHHHHHHHH-----------------TCSCEESSHHHHHHCT
T ss_pred cEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcCCHHHHHHHHHHc-----------------CCCcccCCHHHHhcCC
Confidence 69999999999999998887651 0234 556799999988776420 11135678888776
Q ss_pred CCcEEEEeccCC
Q 017997 78 EADIVFVSVNTP 89 (362)
Q Consensus 78 ~aDvVii~vptp 89 (362)
+.|+|++|+|+.
T Consensus 66 ~vD~V~i~tp~~ 77 (334)
T 3ohs_X 66 NVEVAYVGTQHP 77 (334)
T ss_dssp TCCEEEECCCGG
T ss_pred CCCEEEECCCcH
Confidence 699999998753
No 215
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=98.12 E-value=1.2e-05 Score=77.22 Aligned_cols=90 Identities=19% Similarity=0.136 Sum_probs=66.5
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcE
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (362)
++|+|+|+|.+|..+|..|... |.+|+++|+++.+....... .... .+++++++.+|+
T Consensus 212 ktVgIiG~G~IG~~vA~~Lka~--Ga~Viv~D~~p~~a~~A~~~-------------------G~~~-~sL~eal~~ADV 269 (436)
T 3h9u_A 212 KTACVCGYGDVGKGCAAALRGF--GARVVVTEVDPINALQAAME-------------------GYQV-LLVEDVVEEAHI 269 (436)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHT-------------------TCEE-CCHHHHTTTCSE
T ss_pred CEEEEEeeCHHHHHHHHHHHHC--CCEEEEECCChhhhHHHHHh-------------------CCee-cCHHHHHhhCCE
Confidence 4899999999999999999988 99999999998766443321 1232 378888999999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCc
Q 017997 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVP 130 (362)
Q Consensus 82 Vii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~ 130 (362)
|+++.++..- .+ ....+.++++.+|++.+-.+
T Consensus 270 Vilt~gt~~i---------I~--------~e~l~~MK~gAIVINvgRg~ 301 (436)
T 3h9u_A 270 FVTTTGNDDI---------IT--------SEHFPRMRDDAIVCNIGHFD 301 (436)
T ss_dssp EEECSSCSCS---------BC--------TTTGGGCCTTEEEEECSSSG
T ss_pred EEECCCCcCc---------cC--------HHHHhhcCCCcEEEEeCCCC
Confidence 9987654321 11 12345678999999877543
No 216
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=98.09 E-value=7e-06 Score=77.91 Aligned_cols=108 Identities=15% Similarity=0.138 Sum_probs=70.4
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcE
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (362)
+||+|||+|.||.+++..|++. ++|+++||++++++++.+...... -.+.-..+++++++++|+
T Consensus 17 ~~v~IiGaG~iG~~ia~~L~~~---~~V~V~~R~~~~a~~la~~~~~~~-------------~d~~~~~~l~~ll~~~Dv 80 (365)
T 2z2v_A 17 MKVLILGAGNIGRAIAWDLKDE---FDVYIGDVNNENLEKVKEFATPLK-------------VDASNFDKLVEVMKEFEL 80 (365)
T ss_dssp CEEEEECCSHHHHHHHHHHTTT---SEEEEEESCHHHHHHHTTTSEEEE-------------CCTTCHHHHHHHHTTCSC
T ss_pred CeEEEEcCCHHHHHHHHHHHcC---CeEEEEECCHHHHHHHHhhCCeEE-------------EecCCHHHHHHHHhCCCE
Confidence 5899999999999999999875 899999999999998865310000 000001345566889999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhc
Q 017997 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHN 144 (362)
Q Consensus 82 Vii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~ 144 (362)
||.|+|.+.. ..+ +...++.+..+++.|+.++.+ +.+.+..++.
T Consensus 81 VIn~~P~~~~---------------~~v---~~a~l~~G~~~vD~s~~~~~~-~~l~~~Ak~a 124 (365)
T 2z2v_A 81 VIGALPGFLG---------------FKS---IKAAIKSKVDMVDVSFMPENP-LELRDEAEKA 124 (365)
T ss_dssp EEECCCHHHH---------------HHH---HHHHHHTTCCEEECCCCSSCG-GGGHHHHHHT
T ss_pred EEECCChhhh---------------HHH---HHHHHHhCCeEEEccCCcHHH-HHHHHHHHHc
Confidence 9999763210 112 223355677788877765554 3344444443
No 217
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=98.09 E-value=7.7e-06 Score=75.39 Aligned_cols=104 Identities=15% Similarity=0.178 Sum_probs=69.6
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCC-eEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCc
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~-~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (362)
++|.|+|+|.+|.+++..|++. |. +|++++|++++.+.+.+..... .+.....+++.+++.++|
T Consensus 142 ~~vlVlGaGg~g~aia~~L~~~--G~~~V~v~nR~~~ka~~la~~~~~~-------------~~~~~~~~~~~~~~~~aD 206 (297)
T 2egg_A 142 KRILVIGAGGGARGIYFSLLST--AAERIDMANRTVEKAERLVREGDER-------------RSAYFSLAEAETRLAEYD 206 (297)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT--TCSEEEEECSSHHHHHHHHHHSCSS-------------SCCEECHHHHHHTGGGCS
T ss_pred CEEEEECcHHHHHHHHHHHHHC--CCCEEEEEeCCHHHHHHHHHHhhhc-------------cCceeeHHHHHhhhccCC
Confidence 5799999999999999999998 87 9999999999988876421000 001111124455678999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCcccc
Q 017997 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKT 133 (362)
Q Consensus 81 vVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt 133 (362)
+||.|+|.+...+. ..+.+. ...++++.+|++.++.|..|
T Consensus 207 ivIn~t~~~~~~~~----~~~~i~---------~~~l~~~~~v~D~~y~P~~T 246 (297)
T 2egg_A 207 IIINTTSVGMHPRV----EVQPLS---------LERLRPGVIVSDIIYNPLET 246 (297)
T ss_dssp EEEECSCTTCSSCC----SCCSSC---------CTTCCTTCEEEECCCSSSSC
T ss_pred EEEECCCCCCCCCC----CCCCCC---------HHHcCCCCEEEEcCCCCCCC
Confidence 99999886542110 000000 13467888999988865544
No 218
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=98.08 E-value=1.6e-05 Score=73.57 Aligned_cols=88 Identities=17% Similarity=0.344 Sum_probs=54.1
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCc
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVA-VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~-~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (362)
+||+|||+|.||..++..|.+. ++++++ ++|+++++.+. .|. + ....+++.+ ..++|
T Consensus 10 irv~IIG~G~iG~~~~~~l~~~-~~~elvav~d~~~~~~~~--~g~-~-----------------~~~~~~l~~-~~~~D 67 (304)
T 3bio_A 10 IRAAIVGYGNIGRYALQALREA-PDFEIAGIVRRNPAEVPF--ELQ-P-----------------FRVVSDIEQ-LESVD 67 (304)
T ss_dssp EEEEEECCSHHHHHHHHHHHHC-TTEEEEEEECC---------CCT-T-----------------SCEESSGGG-SSSCC
T ss_pred CEEEEECChHHHHHHHHHHhcC-CCCEEEEEEcCCHHHHHH--cCC-C-----------------cCCHHHHHh-CCCCC
Confidence 5899999999999999999874 478887 68999887654 110 0 112344444 37899
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCC
Q 017997 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTV 129 (362)
Q Consensus 81 vVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv 129 (362)
+|++|+|+.. -.+.+...++.+.-|++++.+
T Consensus 68 vViiatp~~~------------------h~~~~~~al~aG~~Vi~ekP~ 98 (304)
T 3bio_A 68 VALVCSPSRE------------------VERTALEILKKGICTADSFDI 98 (304)
T ss_dssp EEEECSCHHH------------------HHHHHHHHHTTTCEEEECCCC
T ss_pred EEEECCCchh------------------hHHHHHHHHHcCCeEEECCCC
Confidence 9999977421 123333445667777776543
No 219
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=98.04 E-value=2.9e-05 Score=73.36 Aligned_cols=67 Identities=10% Similarity=0.221 Sum_probs=49.3
Q ss_pred ceEEEEcCChhHHH-HHHHHHHcCCCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhc--
Q 017997 2 VKICCIGAGYVGGP-TMAVIALKCPSIEVA-VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS-- 77 (362)
Q Consensus 2 mkI~VIGlG~~G~~-lA~~la~~~~G~~V~-~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~-- 77 (362)
+||+|||+|.||.. .+..+.+. ++++|+ ++|++++++.+-. +...+.+|+++.++
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~-~~~~l~av~d~~~~~~~~~~--------------------~~~~~~~~~~~ll~~~ 64 (358)
T 3gdo_A 6 IKVGILGYGLSGSVFHGPLLDVL-DEYQISKIMTSRTEEVKRDF--------------------PDAEVVHELEEITNDP 64 (358)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTC-TTEEEEEEECSCHHHHHHHC--------------------TTSEEESSTHHHHTCT
T ss_pred ceEEEEccCHHHHHHHHHHHhhC-CCeEEEEEEcCCHHHHHhhC--------------------CCCceECCHHHHhcCC
Confidence 58999999999986 56666554 578875 6699987743211 12466788888776
Q ss_pred CCcEEEEeccCC
Q 017997 78 EADIVFVSVNTP 89 (362)
Q Consensus 78 ~aDvVii~vptp 89 (362)
+.|+|++|+|+.
T Consensus 65 ~vD~V~i~tp~~ 76 (358)
T 3gdo_A 65 AIELVIVTTPSG 76 (358)
T ss_dssp TCCEEEECSCTT
T ss_pred CCCEEEEcCCcH
Confidence 789999998764
No 220
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=98.03 E-value=2.5e-05 Score=73.61 Aligned_cols=67 Identities=19% Similarity=0.357 Sum_probs=49.9
Q ss_pred ceEEEEcCChhHHH-HHHHHHHcCCCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcC-
Q 017997 2 VKICCIGAGYVGGP-TMAVIALKCPSIEVA-VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSE- 78 (362)
Q Consensus 2 mkI~VIGlG~~G~~-lA~~la~~~~G~~V~-~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~- 78 (362)
+||+|||+|.||.. .+..+.+. ++.+|+ ++|+++++.++ . .....+.+|+++.+++
T Consensus 8 ~rvgiiG~G~~g~~~~~~~~~~~-~~~~l~av~d~~~~~~~~--~------------------~~~~~~~~~~~~ll~~~ 66 (352)
T 3kux_A 8 IKVGLLGYGYASKTFHAPLIMGT-PGLELAGVSSSDASKVHA--D------------------WPAIPVVSDPQMLFNDP 66 (352)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTS-TTEEEEEEECSCHHHHHT--T------------------CSSCCEESCHHHHHHCS
T ss_pred ceEEEECCCHHHHHHHHHHHhhC-CCcEEEEEECCCHHHHHh--h------------------CCCCceECCHHHHhcCC
Confidence 58999999999997 66666654 477876 67999988751 1 0124567888887764
Q ss_pred -CcEEEEeccCC
Q 017997 79 -ADIVFVSVNTP 89 (362)
Q Consensus 79 -aDvVii~vptp 89 (362)
.|+|++|+|+.
T Consensus 67 ~vD~V~i~tp~~ 78 (352)
T 3kux_A 67 SIDLIVIPTPND 78 (352)
T ss_dssp SCCEEEECSCTT
T ss_pred CCCEEEEeCChH
Confidence 99999998754
No 221
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=98.02 E-value=5.7e-06 Score=75.13 Aligned_cols=74 Identities=19% Similarity=0.229 Sum_probs=50.0
Q ss_pred CceEEEEc-CChhHHHHHHHHHHcCCCCeEEE-EeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcC
Q 017997 1 MVKICCIG-AGYVGGPTMAVIALKCPSIEVAV-VDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSE 78 (362)
Q Consensus 1 ~mkI~VIG-lG~~G~~lA~~la~~~~G~~V~~-~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~ 78 (362)
||||+|+| +|+||..++..+.+. +++++++ +|++..... |. ... ++.. ....+..++|+++++++
T Consensus 7 mikV~V~Ga~G~MG~~i~~~l~~~-~~~eLv~~~d~~~~~~~----G~-d~g-----el~g--~~~gv~v~~dl~~ll~~ 73 (272)
T 4f3y_A 7 SMKIAIAGASGRMGRMLIEAVLAA-PDATLVGALDRTGSPQL----GQ-DAG-----AFLG--KQTGVALTDDIERVCAE 73 (272)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHHC-TTEEEEEEBCCTTCTTT----TS-BTT-----TTTT--CCCSCBCBCCHHHHHHH
T ss_pred ccEEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEEecCcccc----cc-cHH-----HHhC--CCCCceecCCHHHHhcC
Confidence 57999999 899999999988876 4788777 588643210 10 000 0000 01135667899888889
Q ss_pred CcEEEEecc
Q 017997 79 ADIVFVSVN 87 (362)
Q Consensus 79 aDvVii~vp 87 (362)
+|+||.+++
T Consensus 74 ~DVVIDfT~ 82 (272)
T 4f3y_A 74 ADYLIDFTL 82 (272)
T ss_dssp CSEEEECSC
T ss_pred CCEEEEcCC
Confidence 999999964
No 222
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=98.02 E-value=1.2e-05 Score=76.95 Aligned_cols=70 Identities=9% Similarity=0.158 Sum_probs=53.8
Q ss_pred CceEEEEcCC-hhHHHHHHHHHHcCCCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhc-
Q 017997 1 MVKICCIGAG-YVGGPTMAVIALKCPSIEVA-VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS- 77 (362)
Q Consensus 1 ~mkI~VIGlG-~~G~~lA~~la~~~~G~~V~-~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~- 77 (362)
+|||+|||+| .||..++..|.+. ++.+++ ++|+++++.+.+.+. -++...+|++++++
T Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~-~~~~l~av~d~~~~~~~~~a~~------------------~g~~~~~~~~ell~~ 62 (387)
T 3moi_A 2 KIRFGICGLGFAGSVLMAPAMRHH-PDAQIVAACDPNEDVRERFGKE------------------YGIPVFATLAEMMQH 62 (387)
T ss_dssp CEEEEEECCSHHHHTTHHHHHHHC-TTEEEEEEECSCHHHHHHHHHH------------------HTCCEESSHHHHHHH
T ss_pred ceEEEEEeCCHHHHHHHHHHHHhC-CCeEEEEEEeCCHHHHHHHHHH------------------cCCCeECCHHHHHcC
Confidence 3699999999 9999999988875 367765 679999988776541 02345678888776
Q ss_pred -CCcEEEEeccCC
Q 017997 78 -EADIVFVSVNTP 89 (362)
Q Consensus 78 -~aDvVii~vptp 89 (362)
+.|+|++|+|+.
T Consensus 63 ~~vD~V~i~tp~~ 75 (387)
T 3moi_A 63 VQMDAVYIASPHQ 75 (387)
T ss_dssp SCCSEEEECSCGG
T ss_pred CCCCEEEEcCCcH
Confidence 599999998753
No 223
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=98.01 E-value=2.9e-05 Score=72.85 Aligned_cols=71 Identities=14% Similarity=0.141 Sum_probs=54.1
Q ss_pred ceEEEEcCC-hhHHHHHHHHHHcCCCCeE-EEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhc--
Q 017997 2 VKICCIGAG-YVGGPTMAVIALKCPSIEV-AVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS-- 77 (362)
Q Consensus 2 mkI~VIGlG-~~G~~lA~~la~~~~G~~V-~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~-- 77 (362)
+||+|||+| .+|...+..|.+..++.++ .++|+++++.+++.+.. +...+.+|+++.++
T Consensus 19 irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~-----------------~~~~~~~~~~~ll~~~ 81 (340)
T 1zh8_A 19 IRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMV-----------------GNPAVFDSYEELLESG 81 (340)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHH-----------------SSCEEESCHHHHHHSS
T ss_pred eeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcCCHHHHHHHHHHh-----------------CCCcccCCHHHHhcCC
Confidence 589999999 8999999888765246776 57799999988765420 11256788988775
Q ss_pred CCcEEEEeccCC
Q 017997 78 EADIVFVSVNTP 89 (362)
Q Consensus 78 ~aDvVii~vptp 89 (362)
+.|+|+||+|+.
T Consensus 82 ~vD~V~i~tp~~ 93 (340)
T 1zh8_A 82 LVDAVDLTLPVE 93 (340)
T ss_dssp CCSEEEECCCGG
T ss_pred CCCEEEEeCCch
Confidence 689999998753
No 224
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=97.99 E-value=4.1e-05 Score=74.50 Aligned_cols=75 Identities=23% Similarity=0.232 Sum_probs=53.2
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeE-EEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEec----CHHhhh
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEV-AVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFST----DVEKHV 76 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V-~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~----d~~~a~ 76 (362)
+||+|||+|.||...+..|.+. ++.+| .++|+++++.+.+.+. +.+.........+ |+++++
T Consensus 21 ~rvgiIG~G~~g~~h~~~l~~~-~~~~lvav~d~~~~~~~~~a~~------------~~~~g~~~~~~~~~~~~~~~~ll 87 (444)
T 2ixa_A 21 VRIAFIAVGLRGQTHVENMARR-DDVEIVAFADPDPYMVGRAQEI------------LKKNGKKPAKVFGNGNDDYKNML 87 (444)
T ss_dssp EEEEEECCSHHHHHHHHHHHTC-TTEEEEEEECSCHHHHHHHHHH------------HHHTTCCCCEEECSSTTTHHHHT
T ss_pred ceEEEEecCHHHHHHHHHHHhC-CCcEEEEEEeCCHHHHHHHHHH------------HHhcCCCCCceeccCCCCHHHHh
Confidence 5899999999999999888764 47776 4779999998876531 0000001134455 888877
Q ss_pred c--CCcEEEEeccCC
Q 017997 77 S--EADIVFVSVNTP 89 (362)
Q Consensus 77 ~--~aDvVii~vptp 89 (362)
+ +.|+|++|+|+.
T Consensus 88 ~~~~vD~V~i~tp~~ 102 (444)
T 2ixa_A 88 KDKNIDAVFVSSPWE 102 (444)
T ss_dssp TCTTCCEEEECCCGG
T ss_pred cCCCCCEEEEcCCcH
Confidence 6 589999998753
No 225
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=97.99 E-value=1.2e-05 Score=78.05 Aligned_cols=73 Identities=11% Similarity=0.167 Sum_probs=52.8
Q ss_pred ceEEEEcCChhHH-HHHHHHHHcCCCCeE-EEEeCCHHHHHHHHcCC-CCCCCCChHHHHhhhcCCCEEEecCHHhhhc-
Q 017997 2 VKICCIGAGYVGG-PTMAVIALKCPSIEV-AVVDISVSRINAWNSDQ-LPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS- 77 (362)
Q Consensus 2 mkI~VIGlG~~G~-~lA~~la~~~~G~~V-~~~d~~~~~~~~l~~~~-~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~- 77 (362)
+||+|||+|.||. .++..|.+. +++++ .++|+++++.+.+.+.. .+ ...+...+|+++.++
T Consensus 84 irigiIG~G~~g~~~~~~~l~~~-~~~~lvav~d~~~~~~~~~a~~~g~~--------------~~~~~~~~~~~~ll~~ 148 (433)
T 1h6d_A 84 FGYAIVGLGKYALNQILPGFAGC-QHSRIEALVSGNAEKAKIVAAEYGVD--------------PRKIYDYSNFDKIAKD 148 (433)
T ss_dssp EEEEEECCSHHHHHTHHHHTTTC-SSEEEEEEECSCHHHHHHHHHHTTCC--------------GGGEECSSSGGGGGGC
T ss_pred eEEEEECCcHHHHHHHHHHHhhC-CCcEEEEEEcCCHHHHHHHHHHhCCC--------------cccccccCCHHHHhcC
Confidence 6899999999997 888888764 36675 57899999888765421 00 001345677888776
Q ss_pred -CCcEEEEeccCC
Q 017997 78 -EADIVFVSVNTP 89 (362)
Q Consensus 78 -~aDvVii~vptp 89 (362)
++|+|++|+|+.
T Consensus 149 ~~vD~V~iatp~~ 161 (433)
T 1h6d_A 149 PKIDAVYIILPNS 161 (433)
T ss_dssp TTCCEEEECSCGG
T ss_pred CCCCEEEEcCCch
Confidence 799999998753
No 226
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=97.99 E-value=8.3e-06 Score=77.38 Aligned_cols=71 Identities=14% Similarity=0.182 Sum_probs=52.3
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcE
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (362)
|||.|+|+|+||..+|..|++ .++|+++|++.++++++++....+.- .+.-..++.+.++++|+
T Consensus 17 mkilvlGaG~vG~~~~~~L~~---~~~v~~~~~~~~~~~~~~~~~~~~~~-------------d~~d~~~l~~~~~~~Dv 80 (365)
T 3abi_A 17 MKVLILGAGNIGRAIAWDLKD---EFDVYIGDVNNENLEKVKEFATPLKV-------------DASNFDKLVEVMKEFEL 80 (365)
T ss_dssp CEEEEECCSHHHHHHHHHHTT---TSEEEEEESCHHHHHHHTTTSEEEEC-------------CTTCHHHHHHHHTTCSE
T ss_pred cEEEEECCCHHHHHHHHHHhc---CCCeEEEEcCHHHHHHHhccCCcEEE-------------ecCCHHHHHHHHhCCCE
Confidence 899999999999999999876 48999999999999988653211100 00001124456789999
Q ss_pred EEEeccC
Q 017997 82 VFVSVNT 88 (362)
Q Consensus 82 Vii~vpt 88 (362)
||.|+|.
T Consensus 81 Vi~~~p~ 87 (365)
T 3abi_A 81 VIGALPG 87 (365)
T ss_dssp EEECCCG
T ss_pred EEEecCC
Confidence 9999874
No 227
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=97.97 E-value=1.2e-05 Score=75.99 Aligned_cols=111 Identities=13% Similarity=0.095 Sum_probs=72.0
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhc-CCc
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS-EAD 80 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~-~aD 80 (362)
++|+|+|+|.||..+|..|.+. |++|+++|+++++++.+.+.. + .++. +.++.+. +||
T Consensus 174 ktV~V~G~G~VG~~~A~~L~~~--GakVvv~D~~~~~l~~~a~~~-----------------g-a~~v-~~~~ll~~~~D 232 (364)
T 1leh_A 174 LAVSVQGLGNVAKALCKKLNTE--GAKLVVTDVNKAAVSAAVAEE-----------------G-ADAV-APNAIYGVTCD 232 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHH-----------------C-CEEC-CGGGTTTCCCS
T ss_pred CEEEEECchHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHc-----------------C-CEEE-ChHHHhccCCc
Confidence 5899999999999999999999 999999999999887665410 1 1222 2233333 899
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhccCCCceEEeeCCccc
Q 017997 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEFL 159 (362)
Q Consensus 81 vVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~~ 159 (362)
+++.|.... ..+.. .+ +.+ +..+|.+++..|-+.+...+.+.+.+ +.+.|..+
T Consensus 233 Ivip~a~~~----------~I~~~----~~----~~l--g~~iV~e~An~p~t~~ea~~~L~~~G------i~~~Pd~~ 285 (364)
T 1leh_A 233 IFAPCALGA----------VLNDF----TI----PQL--KAKVIAGSADNQLKDPRHGKYLHELG------IVYAPDYV 285 (364)
T ss_dssp EEEECSCSC----------CBSTT----HH----HHC--CCSEECCSCSCCBSSHHHHHHHHHHT------CEECCHHH
T ss_pred EeeccchHH----------HhCHH----HH----HhC--CCcEEEeCCCCCcccHHHHHHHHhCC------CEEeccee
Confidence 999885321 12211 12 223 23345566666666655666677652 35677654
No 228
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=97.97 E-value=1.7e-05 Score=76.10 Aligned_cols=89 Identities=18% Similarity=0.087 Sum_probs=64.9
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcE
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (362)
.+|+|+|.|.+|..+|..+... |.+|+++|+++.+....... .+.+ .+++++++.+|+
T Consensus 248 KTVgVIG~G~IGr~vA~~lraf--Ga~Viv~d~dp~~a~~A~~~-------------------G~~v-v~LeElL~~ADI 305 (464)
T 3n58_A 248 KVAVVCGYGDVGKGSAQSLAGA--GARVKVTEVDPICALQAAMD-------------------GFEV-VTLDDAASTADI 305 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSHHHHHHHHHT-------------------TCEE-CCHHHHGGGCSE
T ss_pred CEEEEECcCHHHHHHHHHHHHC--CCEEEEEeCCcchhhHHHhc-------------------Ccee-ccHHHHHhhCCE
Confidence 4799999999999999999887 89999999998764332211 1233 357888999999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCC
Q 017997 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTV 129 (362)
Q Consensus 82 Vii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv 129 (362)
|+.+++++. ..+ ++....++++.+|++.+-.
T Consensus 306 Vv~atgt~~---------lI~--------~e~l~~MK~GAILINvGRg 336 (464)
T 3n58_A 306 VVTTTGNKD---------VIT--------IDHMRKMKDMCIVGNIGHF 336 (464)
T ss_dssp EEECCSSSS---------SBC--------HHHHHHSCTTEEEEECSSS
T ss_pred EEECCCCcc---------ccC--------HHHHhcCCCCeEEEEcCCC
Confidence 999866431 111 2334557899999986654
No 229
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=97.96 E-value=7e-05 Score=73.39 Aligned_cols=78 Identities=19% Similarity=0.205 Sum_probs=52.7
Q ss_pred ceEEEEcCChhHHHHH--HHHHHcC----CCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhh-cCCCEEEecCHHh
Q 017997 2 VKICCIGAGYVGGPTM--AVIALKC----PSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQC-RGKNLFFSTDVEK 74 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA--~~la~~~----~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~-~~~~l~~t~d~~~ 74 (362)
|||+|||+|.+|.+.. ..++... .+.+++++|+++++++.... ....+.+.. ..-++..|+|.++
T Consensus 1 mKI~iIGaGs~~~t~~l~~~~~~~~~l~~~~~ei~L~Di~~~rl~~~~~--------~~~~~~~~~~~~~~i~~t~d~~e 72 (477)
T 3u95_A 1 MKISIVGAGSVRFALQLVEDIAQTDELSREDTHIYLMDVHERRLNASYI--------LARKYVEELNSPVKVVKTESLDE 72 (477)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTCTTTCSTTCEEEEECSCHHHHHHHHH--------HHHHHHHHHTCCCEEEEESCHHH
T ss_pred CEEEEECCCchhhHHHHHHHHHhhHhcCCCCCEEEEECCCHHHHHHHHH--------HHHHHHHHcCCCeEEEEeCCHHH
Confidence 7999999999986532 2233221 13479999999998875332 011122221 1235788999999
Q ss_pred hhcCCcEEEEecc
Q 017997 75 HVSEADIVFVSVN 87 (362)
Q Consensus 75 a~~~aDvVii~vp 87 (362)
|+++||+||+++.
T Consensus 73 Al~gAD~Vi~~~g 85 (477)
T 3u95_A 73 AIEGADFIINTAY 85 (477)
T ss_dssp HHTTCSEEEECCC
T ss_pred HhCCCCEEEECcc
Confidence 9999999999973
No 230
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=97.96 E-value=6.5e-05 Score=71.05 Aligned_cols=68 Identities=4% Similarity=0.043 Sum_probs=51.0
Q ss_pred ceEEEEcCChhHH-HHHHHHHHcCCCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcC-
Q 017997 2 VKICCIGAGYVGG-PTMAVIALKCPSIEVA-VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSE- 78 (362)
Q Consensus 2 mkI~VIGlG~~G~-~lA~~la~~~~G~~V~-~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~- 78 (362)
+||+|||+|.+|. .++..+... +.+|+ ++|+++++.+.+.+.. +...+.+|+++.+++
T Consensus 27 irvgiiG~G~~~~~~~~~~~~~~--~~~lvav~d~~~~~a~~~a~~~-----------------~~~~~~~~~~~ll~~~ 87 (361)
T 3u3x_A 27 LRFAAVGLNHNHIYGQVNCLLRA--GARLAGFHEKDDALAAEFSAVY-----------------ADARRIATAEEILEDE 87 (361)
T ss_dssp CEEEEECCCSTTHHHHHHHHHHT--TCEEEEEECSCHHHHHHHHHHS-----------------SSCCEESCHHHHHTCT
T ss_pred cEEEEECcCHHHHHHHHHHhhcC--CcEEEEEEcCCHHHHHHHHHHc-----------------CCCcccCCHHHHhcCC
Confidence 4899999999995 456666654 88855 6799999988776521 223466888887764
Q ss_pred -CcEEEEeccC
Q 017997 79 -ADIVFVSVNT 88 (362)
Q Consensus 79 -aDvVii~vpt 88 (362)
.|+|+||+|+
T Consensus 88 ~vD~V~I~tp~ 98 (361)
T 3u3x_A 88 NIGLIVSAAVS 98 (361)
T ss_dssp TCCEEEECCCH
T ss_pred CCCEEEEeCCh
Confidence 8999999774
No 231
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=97.94 E-value=4.2e-05 Score=73.91 Aligned_cols=87 Identities=16% Similarity=0.191 Sum_probs=57.1
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEE-EEeCCHHHHHHHHc---CC-CCCC-CCChHHHHhhhcCCCEEEecCHHhh
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVA-VVDISVSRINAWNS---DQ-LPIY-EPGLDGVVKQCRGKNLFFSTDVEKH 75 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~-~~d~~~~~~~~l~~---~~-~~~~-e~~l~~~~~~~~~~~l~~t~d~~~a 75 (362)
+||||||+|.||..++..+.+. ++.+|+ ++|+++++.+...+ |. .++. .....++-+....+...+++|+++.
T Consensus 24 IRVGIIGaG~iG~~~~~~l~~~-~~veLvAV~D~~~era~~~a~~~yG~~~~~~~~~~~~~i~~a~~~g~~~v~~D~eeL 102 (446)
T 3upl_A 24 IRIGLIGAGEMGTDIVTQVARM-QGIEVGALSARRLPNTFKAIRTAYGDEENAREATTESAMTRAIEAGKIAVTDDNDLI 102 (446)
T ss_dssp EEEEEECCSHHHHHHHHHHTTS-SSEEEEEEECSSTHHHHHHHHHHHSSSTTEEECSSHHHHHHHHHTTCEEEESCHHHH
T ss_pred eEEEEECChHHHHHHHHHHhhC-CCcEEEEEEeCCHHHHHHHHHHhcCCccccccccchhhhhhhhccCCceEECCHHHH
Confidence 5899999999999999887754 466654 56999999887643 20 0000 0011111111113457788999987
Q ss_pred hc--CCcEEEEeccCC
Q 017997 76 VS--EADIVFVSVNTP 89 (362)
Q Consensus 76 ~~--~aDvVii~vptp 89 (362)
++ +.|+|++|+|.|
T Consensus 103 L~d~dIDaVviaTp~p 118 (446)
T 3upl_A 103 LSNPLIDVIIDATGIP 118 (446)
T ss_dssp HTCTTCCEEEECSCCH
T ss_pred hcCCCCCEEEEcCCCh
Confidence 76 589999998754
No 232
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=97.91 E-value=8.4e-06 Score=77.73 Aligned_cols=97 Identities=22% Similarity=0.313 Sum_probs=67.3
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHc-CCCCCCCCChHHHHhhhcCCCEEE--ecCHHhhhcC
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNS-DQLPIYEPGLDGVVKQCRGKNLFF--STDVEKHVSE 78 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~-~~~~~~e~~l~~~~~~~~~~~l~~--t~d~~~a~~~ 78 (362)
++|+|+|+|.+|..+|..+... |.+|+++|+++++.+.+.+ ....+ .... ..++.+.+++
T Consensus 169 ~~V~ViG~G~iG~~~a~~a~~~--Ga~V~~~d~~~~~l~~~~~~~g~~~---------------~~~~~~~~~l~~~l~~ 231 (377)
T 2vhw_A 169 ADVVVIGAGTAGYNAARIANGM--GATVTVLDINIDKLRQLDAEFCGRI---------------HTRYSSAYELEGAVKR 231 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTTTSS---------------EEEECCHHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHhcCCee---------------EeccCCHHHHHHHHcC
Confidence 4899999999999999999888 8999999999999887754 11110 0000 1234556789
Q ss_pred CcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEee
Q 017997 79 ADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKS 127 (362)
Q Consensus 79 aDvVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~S 127 (362)
+|+||.|++.|... .+.+ ..+...+.++++.+|++.|
T Consensus 232 aDvVi~~~~~p~~~-------t~~l-----i~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 232 ADLVIGAVLVPGAK-------APKL-----VSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp CSEEEECCCCTTSC-------CCCC-----BCHHHHTTSCTTCEEEEGG
T ss_pred CCEEEECCCcCCCC-------Ccce-----ecHHHHhcCCCCcEEEEEe
Confidence 99999999766421 1111 1234456678888888765
No 233
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=97.91 E-value=2.2e-05 Score=74.59 Aligned_cols=70 Identities=14% Similarity=0.183 Sum_probs=52.1
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCc
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVA-VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~-~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (362)
.||+|||+| +|...+..+.+...+++++ ++|+++++.+++.+. -++...+|+++.+++.|
T Consensus 8 ~rv~VvG~G-~g~~h~~a~~~~~~~~elvav~~~~~~~a~~~a~~------------------~gv~~~~~~~~l~~~~D 68 (372)
T 4gmf_A 8 QRVLIVGAK-FGEMYLNAFMQPPEGLELVGLLAQGSARSRELAHA------------------FGIPLYTSPEQITGMPD 68 (372)
T ss_dssp EEEEEECST-TTHHHHHTTSSCCTTEEEEEEECCSSHHHHHHHHH------------------TTCCEESSGGGCCSCCS
T ss_pred CEEEEEehH-HHHHHHHHHHhCCCCeEEEEEECCCHHHHHHHHHH------------------hCCCEECCHHHHhcCCC
Confidence 489999999 6987777776642357766 569999998887652 12345678888888999
Q ss_pred EEEEeccCCC
Q 017997 81 IVFVSVNTPT 90 (362)
Q Consensus 81 vVii~vptp~ 90 (362)
+++||+|++.
T Consensus 69 ~v~i~~p~~~ 78 (372)
T 4gmf_A 69 IACIVVRSTV 78 (372)
T ss_dssp EEEECCC--C
T ss_pred EEEEECCCcc
Confidence 9999998765
No 234
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=97.88 E-value=1.7e-05 Score=73.82 Aligned_cols=64 Identities=20% Similarity=0.499 Sum_probs=47.7
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeE-EEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCc
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEV-AVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V-~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (362)
+||+|||+|.||..++..+.+. ++.++ .++|+++++ .+. -.+..++|+++.+.++|
T Consensus 4 irV~IiG~G~mG~~~~~~l~~~-~~~elvav~d~~~~~--~~~--------------------~gv~~~~d~~~ll~~~D 60 (320)
T 1f06_A 4 IRVAIVGYGNLGRSVEKLIAKQ-PDMDLVGIFSRRATL--DTK--------------------TPVFDVADVDKHADDVD 60 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHTTC-SSEEEEEEEESSSCC--SSS--------------------SCEEEGGGGGGTTTTCS
T ss_pred CEEEEEeecHHHHHHHHHHhcC-CCCEEEEEEcCCHHH--hhc--------------------CCCceeCCHHHHhcCCC
Confidence 6899999999999999988875 35665 577987543 111 02556677777667899
Q ss_pred EEEEeccC
Q 017997 81 IVFVSVNT 88 (362)
Q Consensus 81 vVii~vpt 88 (362)
+|++|+|+
T Consensus 61 vViiatp~ 68 (320)
T 1f06_A 61 VLFLCMGS 68 (320)
T ss_dssp EEEECSCT
T ss_pred EEEEcCCc
Confidence 99999874
No 235
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=97.87 E-value=3.7e-05 Score=73.62 Aligned_cols=89 Identities=19% Similarity=0.150 Sum_probs=64.2
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcE
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (362)
.+|+|+|+|.+|..+|..+... |.+|+++|+++.+....... + .. ..+++++++.+|+
T Consensus 221 ktV~ViG~G~IGk~vA~~Lra~--Ga~Viv~D~dp~ra~~A~~~------------------G-~~-v~~Leeal~~ADI 278 (435)
T 3gvp_A 221 KQVVVCGYGEVGKGCCAALKAM--GSIVYVTEIDPICALQACMD------------------G-FR-LVKLNEVIRQVDI 278 (435)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHT------------------T-CE-ECCHHHHTTTCSE
T ss_pred CEEEEEeeCHHHHHHHHHHHHC--CCEEEEEeCChhhhHHHHHc------------------C-CE-eccHHHHHhcCCE
Confidence 4799999999999999999887 89999999998765433221 1 22 2467888999999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCC
Q 017997 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTV 129 (362)
Q Consensus 82 Vii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv 129 (362)
|++|..++. ..+ .+....++++.+|++.+-.
T Consensus 279 Vi~atgt~~---------lI~--------~e~l~~MK~gailINvgrg 309 (435)
T 3gvp_A 279 VITCTGNKN---------VVT--------REHLDRMKNSCIVCNMGHS 309 (435)
T ss_dssp EEECSSCSC---------SBC--------HHHHHHSCTTEEEEECSST
T ss_pred EEECCCCcc---------cCC--------HHHHHhcCCCcEEEEecCC
Confidence 999854331 111 1233557899999886653
No 236
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=97.87 E-value=9e-05 Score=71.37 Aligned_cols=71 Identities=13% Similarity=0.289 Sum_probs=54.3
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCC--CCChHHHHhhhcCCCEEEecCHHhh-hcC
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIY--EPGLDGVVKQCRGKNLFFSTDVEKH-VSE 78 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~--e~~l~~~~~~~~~~~l~~t~d~~~a-~~~ 78 (362)
|+|.|+|+|.+|..+|..|.+. |++|+++|.|+++++.+++...++. +..-.+. +..+ +.+
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~--g~~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~--------------L~~agi~~ 68 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSS--GVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDL--------------LESAGAAK 68 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT--TCCEEEEECCHHHHHHHHHTTCCCEESCTTCHHH--------------HHHTTTTT
T ss_pred CeEEEECCCHHHHHHHHHHHHC--CCCEEEEECCHHHHHHHHhCCCeEEEcCCCCHHH--------------HHhcCCCc
Confidence 6799999999999999999998 9999999999999999876433321 1211111 1222 678
Q ss_pred CcEEEEeccC
Q 017997 79 ADIVFVSVNT 88 (362)
Q Consensus 79 aDvVii~vpt 88 (362)
||+||+|++.
T Consensus 69 A~~viv~~~~ 78 (413)
T 3l9w_A 69 AEVLINAIDD 78 (413)
T ss_dssp CSEEEECCSS
T ss_pred cCEEEECCCC
Confidence 9999999764
No 237
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=97.86 E-value=4.2e-05 Score=72.33 Aligned_cols=67 Identities=15% Similarity=0.186 Sum_probs=48.6
Q ss_pred ceEEEEcCChhHHH-HHHHHHHcCCCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcC-
Q 017997 2 VKICCIGAGYVGGP-TMAVIALKCPSIEVA-VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSE- 78 (362)
Q Consensus 2 mkI~VIGlG~~G~~-lA~~la~~~~G~~V~-~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~- 78 (362)
+||+|||+|.||.. .+..+.+. ++.+|+ ++|++++++ .+. -+.....+|+++.+++
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~-~~~~l~av~d~~~~~~---~~~-----------------~~~~~~~~~~~~ll~~~ 64 (362)
T 3fhl_A 6 IKTGLAAFGMSGQVFHAPFISTN-PHFELYKIVERSKELS---KER-----------------YPQASIVRSFKELTEDP 64 (362)
T ss_dssp EEEEESCCSHHHHHTTHHHHHHC-TTEEEEEEECSSCCGG---GTT-----------------CTTSEEESCSHHHHTCT
T ss_pred eEEEEECCCHHHHHHHHHHHhhC-CCeEEEEEEcCCHHHH---HHh-----------------CCCCceECCHHHHhcCC
Confidence 58999999999997 66666654 478876 668887652 211 1134667888887765
Q ss_pred -CcEEEEeccCC
Q 017997 79 -ADIVFVSVNTP 89 (362)
Q Consensus 79 -aDvVii~vptp 89 (362)
.|+|++|+|+.
T Consensus 65 ~vD~V~i~tp~~ 76 (362)
T 3fhl_A 65 EIDLIVVNTPDN 76 (362)
T ss_dssp TCCEEEECSCGG
T ss_pred CCCEEEEeCChH
Confidence 89999998753
No 238
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=97.86 E-value=2.1e-05 Score=70.64 Aligned_cols=67 Identities=18% Similarity=0.313 Sum_probs=53.8
Q ss_pred eEEEEcCChhHHHHHHHHHHcCCCC-eEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcE
Q 017997 3 KICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (362)
Q Consensus 3 kI~VIGlG~~G~~lA~~la~~~~G~-~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (362)
+|.|||+|.||.+++..|++. |. +|++++|++++.+++.+.. + ....++..++++++|+
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~--G~~~I~v~nR~~~ka~~la~~~-----------------~-~~~~~~~~~~~~~aDi 169 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQM--GVKDIWVVNRTIERAKALDFPV-----------------K-IFSLDQLDEVVKKAKS 169 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHT--TCCCEEEEESCHHHHHTCCSSC-----------------E-EEEGGGHHHHHHTCSE
T ss_pred eEEEECcHHHHHHHHHHHHHc--CCCEEEEEeCCHHHHHHHHHHc-----------------c-cCCHHHHHhhhcCCCE
Confidence 689999999999999999998 87 8999999999988775421 1 1223456666889999
Q ss_pred EEEeccCC
Q 017997 82 VFVSVNTP 89 (362)
Q Consensus 82 Vii~vptp 89 (362)
||.|+|..
T Consensus 170 VInatp~g 177 (253)
T 3u62_A 170 LFNTTSVG 177 (253)
T ss_dssp EEECSSTT
T ss_pred EEECCCCC
Confidence 99998753
No 239
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=97.86 E-value=5.9e-05 Score=72.78 Aligned_cols=72 Identities=13% Similarity=0.190 Sum_probs=51.1
Q ss_pred ceEEEEcCCh---hHHHHHHHHHHcCCCCeEE--EEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhh
Q 017997 2 VKICCIGAGY---VGGPTMAVIALKCPSIEVA--VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHV 76 (362)
Q Consensus 2 mkI~VIGlG~---~G~~lA~~la~~~~G~~V~--~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~ 76 (362)
+||+|||+|. ||...+..+... ++++++ ++|+++++.+++.+.. + ....++.+|+++.+
T Consensus 38 ~rvgiiG~G~~~~ig~~h~~~~~~~-~~~~lva~v~d~~~~~a~~~a~~~------g---------~~~~~~~~~~~~ll 101 (417)
T 3v5n_A 38 IRLGMVGGGSGAFIGAVHRIAARLD-DHYELVAGALSSTPEKAEASGREL------G---------LDPSRVYSDFKEMA 101 (417)
T ss_dssp EEEEEESCC--CHHHHHHHHHHHHT-SCEEEEEEECCSSHHHHHHHHHHH------T---------CCGGGBCSCHHHHH
T ss_pred ceEEEEcCCCchHHHHHHHHHHhhC-CCcEEEEEEeCCCHHHHHHHHHHc------C---------CCcccccCCHHHHH
Confidence 4899999998 999888887766 246776 5699999988766420 0 00013457788776
Q ss_pred cC-------CcEEEEeccCC
Q 017997 77 SE-------ADIVFVSVNTP 89 (362)
Q Consensus 77 ~~-------aDvVii~vptp 89 (362)
++ .|+|+||+|+.
T Consensus 102 ~~~~~~~~~vD~V~I~tp~~ 121 (417)
T 3v5n_A 102 IREAKLKNGIEAVAIVTPNH 121 (417)
T ss_dssp HHHHHCTTCCSEEEECSCTT
T ss_pred hcccccCCCCcEEEECCCcH
Confidence 55 89999998864
No 240
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=97.85 E-value=1.6e-05 Score=72.46 Aligned_cols=98 Identities=22% Similarity=0.255 Sum_probs=66.3
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCC-eEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCc
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~-~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (362)
+++.|+|+|.+|.+++..|++. |. +|++++|++++.+.+.+.. .....++..+++.++|
T Consensus 118 k~vlvlGaGg~g~aia~~L~~~--G~~~v~v~~R~~~~a~~la~~~------------------~~~~~~~~~~~~~~aD 177 (277)
T 3don_A 118 AYILILGAGGASKGIANELYKI--VRPTLTVANRTMSRFNNWSLNI------------------NKINLSHAESHLDEFD 177 (277)
T ss_dssp CCEEEECCSHHHHHHHHHHHTT--CCSCCEEECSCGGGGTTCCSCC------------------EEECHHHHHHTGGGCS
T ss_pred CEEEEECCcHHHHHHHHHHHHC--CCCEEEEEeCCHHHHHHHHHhc------------------ccccHhhHHHHhcCCC
Confidence 4799999999999999999998 88 8999999998876654320 1111234555678999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCcccc
Q 017997 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKT 133 (362)
Q Consensus 81 vVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt 133 (362)
+||-|+|.....+ .+ ..+ -...++++.+|++.++.|..|
T Consensus 178 iVInaTp~Gm~~~-------~~-----~~l--~~~~l~~~~~V~D~vY~P~~T 216 (277)
T 3don_A 178 IIINTTPAGMNGN-------TD-----SVI--SLNRLASHTLVSDIVYNPYKT 216 (277)
T ss_dssp EEEECCC--------------C-----CSS--CCTTCCSSCEEEESCCSSSSC
T ss_pred EEEECccCCCCCC-------Cc-----CCC--CHHHcCCCCEEEEecCCCCCC
Confidence 9999977532110 00 000 023467889999988876655
No 241
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=97.84 E-value=0.00017 Score=67.62 Aligned_cols=117 Identities=21% Similarity=0.308 Sum_probs=73.5
Q ss_pred eEEEEcC-ChhHHHHHHHHHHcCC-C----CeEEEEeCCHH--HHH----HHHcCCCCCCCCChHHHHhhhcCCCEEEec
Q 017997 3 KICCIGA-GYVGGPTMAVIALKCP-S----IEVAVVDISVS--RIN----AWNSDQLPIYEPGLDGVVKQCRGKNLFFST 70 (362)
Q Consensus 3 kI~VIGl-G~~G~~lA~~la~~~~-G----~~V~~~d~~~~--~~~----~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~ 70 (362)
||+|+|+ |.+|.+++..|+.... | .++.++|+++. +++ .|+..-.+. ......++
T Consensus 26 KVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~-------------~~~~~~~~ 92 (345)
T 4h7p_A 26 KVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPL-------------LDKVVVTA 92 (345)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTT-------------EEEEEEES
T ss_pred EEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccC-------------CCcEEEcC
Confidence 9999996 9999999999987510 1 27999999753 222 222211111 12356778
Q ss_pred CHHhhhcCCcEEEEeccCCCCCCCCCCC--CCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccH
Q 017997 71 DVEKHVSEADIVFVSVNTPTKTQGLGAG--KAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTA 134 (362)
Q Consensus 71 d~~~a~~~aDvVii~vptp~~~~g~~~~--~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~ 134 (362)
+..+++++||+||++-..|..+ |+... -..+.+.+++..+.|.++..++.+|++- |.|..+.
T Consensus 93 ~~~~a~~~advVvi~aG~prkp-GmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvv-sNPvd~~ 156 (345)
T 4h7p_A 93 DPRVAFDGVAIAIMCGAFPRKA-GMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVV-GNPANTN 156 (345)
T ss_dssp CHHHHTTTCSEEEECCCCCCCT-TCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEEC-SSSHHHH
T ss_pred ChHHHhCCCCEEEECCCCCCCC-CCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEe-CCCcchH
Confidence 8888899999999997766433 21100 0112345566667777777777766443 4565543
No 242
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=97.84 E-value=8.4e-05 Score=64.38 Aligned_cols=71 Identities=18% Similarity=0.259 Sum_probs=51.6
Q ss_pred ceEEEEc-CChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCc
Q 017997 2 VKICCIG-AGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (362)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (362)
|||.|.| .|.+|..++..|++. |++|++++|++++.+.+..+ ..+..-+ + ++...+++.++|
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~-~~~~~~D------------~--~d~~~~~~~~~d 63 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNR--GHEVTAIVRNAGKITQTHKD-INILQKD------------I--FDLTLSDLSDQN 63 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCSHHHHHHCSS-SEEEECC------------G--GGCCHHHHTTCS
T ss_pred CeEEEEcCCchhHHHHHHHHHhC--CCEEEEEEcCchhhhhccCC-CeEEecc------------c--cChhhhhhcCCC
Confidence 7999999 599999999999999 99999999999888776421 1110111 1 111114588999
Q ss_pred EEEEeccCC
Q 017997 81 IVFVSVNTP 89 (362)
Q Consensus 81 vVii~vptp 89 (362)
+||-|...+
T Consensus 64 ~vi~~ag~~ 72 (221)
T 3ew7_A 64 VVVDAYGIS 72 (221)
T ss_dssp EEEECCCSS
T ss_pred EEEECCcCC
Confidence 999998754
No 243
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=97.82 E-value=3.7e-05 Score=73.71 Aligned_cols=72 Identities=14% Similarity=0.170 Sum_probs=52.3
Q ss_pred ceEEEEcCCh---hHHHHHHHHHHcCCCCeEE--EEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhh
Q 017997 2 VKICCIGAGY---VGGPTMAVIALKCPSIEVA--VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHV 76 (362)
Q Consensus 2 mkI~VIGlG~---~G~~lA~~la~~~~G~~V~--~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~ 76 (362)
+||+|||+|. ||...+..+... ++++++ ++|+++++.+.+.+.. +. ...++.+|+++.+
T Consensus 13 ~rvgiiG~G~~~~ig~~h~~~~~~~-~~~~lva~v~d~~~~~a~~~a~~~------g~---------~~~~~~~~~~~ll 76 (398)
T 3dty_A 13 IRWAMVGGGSQSQIGYIHRCAALRD-NTFVLVAGAFDIDPIRGSAFGEQL------GV---------DSERCYADYLSMF 76 (398)
T ss_dssp EEEEEEECCTTCSSHHHHHHHHHGG-GSEEEEEEECCSSHHHHHHHHHHT------TC---------CGGGBCSSHHHHH
T ss_pred ceEEEEcCCccchhHHHHHHHHhhC-CCeEEEEEEeCCCHHHHHHHHHHh------CC---------CcceeeCCHHHHH
Confidence 4899999999 999998888766 257777 4699999988776421 00 0013457788776
Q ss_pred cC-------CcEEEEeccCC
Q 017997 77 SE-------ADIVFVSVNTP 89 (362)
Q Consensus 77 ~~-------aDvVii~vptp 89 (362)
++ .|+|+||+|+.
T Consensus 77 ~~~~~~~~~vD~V~i~tp~~ 96 (398)
T 3dty_A 77 EQEARRADGIQAVSIATPNG 96 (398)
T ss_dssp HHHTTCTTCCSEEEEESCGG
T ss_pred hcccccCCCCCEEEECCCcH
Confidence 54 99999998754
No 244
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=97.81 E-value=6.3e-05 Score=61.87 Aligned_cols=40 Identities=13% Similarity=0.114 Sum_probs=34.9
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCC-HHHHHHHH
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDIS-VSRINAWN 43 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~-~~~~~~l~ 43 (362)
++|.|+|+|.+|..++..|.+. |++|+++|++ +++++.+.
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~--g~~V~vid~~~~~~~~~~~ 44 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQR--GQNVTVISNLPEDDIKQLE 44 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT--TCCEEEEECCCHHHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHHC--CCCEEEEECCChHHHHHHH
Confidence 4799999999999999999998 9999999998 56665554
No 245
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=97.81 E-value=1.8e-05 Score=75.21 Aligned_cols=101 Identities=18% Similarity=0.275 Sum_probs=64.7
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHc-CCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCc
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNS-DQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~-~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (362)
++|+|+|+|.+|..++..+... |++|+++|+++++.+.+.+ ....+. ....-..+.++.++++|
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~--Ga~V~~~d~~~~~~~~~~~~~g~~~~-------------~~~~~~~~l~~~~~~~D 231 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGM--GAQVTILDVNHKRLQYLDDVFGGRVI-------------TLTATEANIKKSVQHAD 231 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTTTSEE-------------EEECCHHHHHHHHHHCS
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHHhcCceEE-------------EecCCHHHHHHHHhCCC
Confidence 5899999999999999999988 8999999999998887654 211000 00000123455678999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCC
Q 017997 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTV 129 (362)
Q Consensus 81 vVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv 129 (362)
+||.|++.+... .+.+ ..+...+.++++.+|++.|..
T Consensus 232 vVi~~~g~~~~~-------~~~l-----i~~~~l~~mk~gg~iV~v~~~ 268 (369)
T 2eez_A 232 LLIGAVLVPGAK-------APKL-----VTRDMLSLMKEGAVIVDVAVD 268 (369)
T ss_dssp EEEECCC--------------CC-----SCHHHHTTSCTTCEEEECC--
T ss_pred EEEECCCCCccc-------cchh-----HHHHHHHhhcCCCEEEEEecC
Confidence 999998854210 0000 123455667888888876643
No 246
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=97.80 E-value=7.7e-05 Score=71.76 Aligned_cols=71 Identities=14% Similarity=0.149 Sum_probs=52.3
Q ss_pred ceEEEEcCChhHHHHHHHHHHcC-------CCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHH
Q 017997 2 VKICCIGAGYVGGPTMAVIALKC-------PSIEVA-VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVE 73 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~-------~G~~V~-~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~ 73 (362)
+||||||+|.||...+..+.+.. .+.+|+ ++|+++++.+++.+.. +...+.+|++
T Consensus 27 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~~~-----------------~~~~~y~d~~ 89 (412)
T 4gqa_A 27 LNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKL-----------------GAEKAYGDWR 89 (412)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHHHH-----------------TCSEEESSHH
T ss_pred ceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHHHc-----------------CCCeEECCHH
Confidence 48999999999998888887641 123554 5699999998876520 1225678898
Q ss_pred hhhc--CCcEEEEeccCC
Q 017997 74 KHVS--EADIVFVSVNTP 89 (362)
Q Consensus 74 ~a~~--~aDvVii~vptp 89 (362)
+.++ +.|+|+||+|+.
T Consensus 90 ~ll~~~~vD~V~I~tp~~ 107 (412)
T 4gqa_A 90 ELVNDPQVDVVDITSPNH 107 (412)
T ss_dssp HHHHCTTCCEEEECSCGG
T ss_pred HHhcCCCCCEEEECCCcH
Confidence 8775 689999998754
No 247
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=97.79 E-value=0.00011 Score=72.12 Aligned_cols=72 Identities=13% Similarity=0.171 Sum_probs=54.3
Q ss_pred ceEEEEcC----ChhHHHHHHHHHHcCCCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhh
Q 017997 2 VKICCIGA----GYVGGPTMAVIALKCPSIEVA-VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHV 76 (362)
Q Consensus 2 mkI~VIGl----G~~G~~lA~~la~~~~G~~V~-~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~ 76 (362)
+||+|||+ |.||..++..|.+..++++|+ ++|+++++.+.+.+.. + .....+.+|+++++
T Consensus 40 irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d~~~~~a~~~a~~~------g---------~~~~~~~~d~~ell 104 (479)
T 2nvw_A 40 IRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQL------Q---------LKHATGFDSLESFA 104 (479)
T ss_dssp EEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHT------T---------CTTCEEESCHHHHH
T ss_pred CEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHc------C---------CCcceeeCCHHHHh
Confidence 58999999 999999999998742477765 7899999988776421 0 01134678888877
Q ss_pred c--CCcEEEEeccC
Q 017997 77 S--EADIVFVSVNT 88 (362)
Q Consensus 77 ~--~aDvVii~vpt 88 (362)
+ +.|+|+||+|+
T Consensus 105 ~~~~vD~V~I~tp~ 118 (479)
T 2nvw_A 105 QYKDIDMIVVSVKV 118 (479)
T ss_dssp HCTTCSEEEECSCH
T ss_pred cCCCCCEEEEcCCc
Confidence 5 69999999874
No 248
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=97.79 E-value=5.1e-05 Score=71.40 Aligned_cols=70 Identities=16% Similarity=0.340 Sum_probs=46.7
Q ss_pred ceEEEEcCChhHH-HHHHHHHHcCCCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcC-
Q 017997 2 VKICCIGAGYVGG-PTMAVIALKCPSIEVA-VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSE- 78 (362)
Q Consensus 2 mkI~VIGlG~~G~-~lA~~la~~~~G~~V~-~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~- 78 (362)
+||+|||+|.||. ..+..+.+. ++++|+ ++|++ +.+.+.+. .........+|+++.+++
T Consensus 3 ~rvgiiG~G~~g~~~~~~~l~~~-~~~~l~av~d~~--~~~~~a~~---------------~~~~~~~~~~~~~~ll~~~ 64 (349)
T 3i23_A 3 VKMGFIGFGKSANRYHLPYVMIR-ETLEVKTIFDLH--VNEKAAAP---------------FKEKGVNFTADLNELLTDP 64 (349)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTC-TTEEEEEEECTT--CCHHHHHH---------------HHTTTCEEESCTHHHHSCT
T ss_pred eEEEEEccCHHHHHHHHHHHhhC-CCeEEEEEECCC--HHHHHHHh---------------hCCCCCeEECCHHHHhcCC
Confidence 5999999999998 455555543 578876 66877 22222210 001235677888887765
Q ss_pred -CcEEEEeccCC
Q 017997 79 -ADIVFVSVNTP 89 (362)
Q Consensus 79 -aDvVii~vptp 89 (362)
.|+|++|+|+.
T Consensus 65 ~~D~V~i~tp~~ 76 (349)
T 3i23_A 65 EIELITICTPAH 76 (349)
T ss_dssp TCCEEEECSCGG
T ss_pred CCCEEEEeCCcH
Confidence 89999998753
No 249
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=97.78 E-value=0.00012 Score=68.32 Aligned_cols=113 Identities=17% Similarity=0.319 Sum_probs=72.1
Q ss_pred ceEEEEc-CChhHHHHHHHHHHcCCCC--e-----EEEEeCCH--HHHH----HHHcCCCCCCCCChHHHHhhhcCCCEE
Q 017997 2 VKICCIG-AGYVGGPTMAVIALKCPSI--E-----VAVVDISV--SRIN----AWNSDQLPIYEPGLDGVVKQCRGKNLF 67 (362)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~la~~~~G~--~-----V~~~d~~~--~~~~----~l~~~~~~~~e~~l~~~~~~~~~~~l~ 67 (362)
|||+|+| +|.+|.++|..|+.. |. + +.++|+++ ++++ .|+....++ ...+.
T Consensus 4 ~kV~V~GaaG~VG~~la~~L~~~--~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~-------------~~~~~ 68 (333)
T 5mdh_A 4 IRVLVTGAAGQIAYSLLYSIGNG--SVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPL-------------LKDVI 68 (333)
T ss_dssp EEEEESSTTSHHHHTTHHHHHTT--TTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTT-------------EEEEE
T ss_pred eEEEEECCCCHHHHHHHHHHHhC--CCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcc-------------cCCEE
Confidence 7999999 799999999999987 54 5 99999974 3333 233221121 02355
Q ss_pred EecCHHhhhcCCcEEEEeccCCCCCCCCCCCCCCC-----hHHHHHHHHHHHhhcCCCCEEEEeeCCccccH
Q 017997 68 FSTDVEKHVSEADIVFVSVNTPTKTQGLGAGKAAD-----LTYWESAARVIADVSKSDKIVVEKSTVPVKTA 134 (362)
Q Consensus 68 ~t~d~~~a~~~aDvVii~vptp~~~~g~~~~~~~d-----~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~ 134 (362)
.+++..+++++||+||++-..|... |+ + ..| .+.+++..+.+.++..++..+++ -|.|..+.
T Consensus 69 ~~~~~~~~~~daDvVvitAg~prkp-G~--t-R~dll~~N~~i~~~i~~~i~~~~~~~~~viv-vsNPvd~~ 135 (333)
T 5mdh_A 69 ATDKEEIAFKDLDVAILVGSMPRRD-GM--E-RKDLLKANVKIFKCQGAALDKYAKKSVKVIV-VGNPANTN 135 (333)
T ss_dssp EESCHHHHTTTCSEEEECCSCCCCT-TC--C-TTTTHHHHHHHHHHHHHHHHHHSCTTCEEEE-CSSSHHHH
T ss_pred EcCCcHHHhCCCCEEEEeCCCCCCC-CC--C-HHHHHHHHHHHHHHHHHHHHHhCCCCeEEEE-cCCchHHH
Confidence 6677667799999999987665432 21 1 223 35566667777777655543433 24566554
No 250
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=97.77 E-value=0.00013 Score=70.23 Aligned_cols=116 Identities=17% Similarity=0.136 Sum_probs=70.8
Q ss_pred CceEEEEcCChhHHHH--HHHHHH--cC-CCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhh
Q 017997 1 MVKICCIGAGYVGGPT--MAVIAL--KC-PSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKH 75 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~l--A~~la~--~~-~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a 75 (362)
+|||+|||+|.+ .+. +..|+. .. ++.+|+++|+++++++.... +...+.... -+++.++|+.++
T Consensus 2 ~~KI~IIGaG~v-~~~~l~~~l~~~~~~l~~~el~L~Di~~~~~~~~~~---------~~~~~~~~~-~~v~~t~d~~~a 70 (417)
T 1up7_A 2 HMRIAVIGGGSS-YTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVD---------FVKRLVKDR-FKVLISDTFEGA 70 (417)
T ss_dssp CCEEEEETTTCT-THHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHH---------HHHHHHTTS-SEEEECSSHHHH
T ss_pred CCEEEEECCCHH-HHHHHHHHHHhcccCCCcCEEEEEeCCHHHHHHHHH---------HHHHHhhCC-eEEEEeCCHHHH
Confidence 489999999996 322 223454 32 25789999999998775332 111010101 347777898778
Q ss_pred hcCCcEEEEeccCCCCCCCCCCCC------CCC------------------hHHHHHHHHHHHhhcCCCCEEEEeeCCcc
Q 017997 76 VSEADIVFVSVNTPTKTQGLGAGK------AAD------------------LTYWESAARVIADVSKSDKIVVEKSTVPV 131 (362)
Q Consensus 76 ~~~aDvVii~vptp~~~~g~~~~~------~~d------------------~~~l~~~~~~i~~~l~~~~iVv~~STv~~ 131 (362)
+++||+||++...+... +. ++ ..+ +..+.+.++.|.++. +.++++ -|.|.
T Consensus 71 l~~AD~Viitagvg~~~-~~--~rd~~i~~k~glvgqeT~G~GGi~~~~rni~i~~~i~~~i~~~~--~A~lin-~TNPv 144 (417)
T 1up7_A 71 VVDAKYVIFQFRPGGLK-GR--ENDEGIPLKYGLIGQETTGVGGFSAALRAFPIVEEYVDTVRKTS--NATIVN-FTNPS 144 (417)
T ss_dssp HTTCSEEEECCCTTHHH-HH--HHHHHGGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHTT--CCEEEE-CSSSH
T ss_pred hCCCCEEEEcCCCCCCC-cc--chhhhhhhhcCcccccccccchhHHhhccHHHHHHHHHHHHHHC--CEEEEE-eCChH
Confidence 99999999998654211 00 00 011 134677778888887 666655 35666
Q ss_pred cc
Q 017997 132 KT 133 (362)
Q Consensus 132 gt 133 (362)
+.
T Consensus 145 di 146 (417)
T 1up7_A 145 GH 146 (417)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 251
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=97.77 E-value=0.00039 Score=64.34 Aligned_cols=119 Identities=21% Similarity=0.331 Sum_probs=70.4
Q ss_pred ceEEEEcC-ChhHHHHHHHHHHcCCCCeEEEEeC--CHHHHHH----HHcCCCCCCCCChHHHHhhhcCCCEEEecC-HH
Q 017997 2 VKICCIGA-GYVGGPTMAVIALKCPSIEVAVVDI--SVSRINA----WNSDQLPIYEPGLDGVVKQCRGKNLFFSTD-VE 73 (362)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~la~~~~G~~V~~~d~--~~~~~~~----l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d-~~ 73 (362)
|||+|+|+ |.+|.+++..|+..+...++.++|+ ++++++. +.... ++.. ....++.++| ..
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~-~~~~----------~~~~i~~~~d~l~ 69 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDAL-AGTR----------SDANIYVESDENL 69 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHH-TTSC----------CCCEEEEEETTCG
T ss_pred CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhH-HhcC----------CCeEEEeCCcchH
Confidence 79999999 9999999999998721237999999 8765543 22110 1100 0113444443 46
Q ss_pred hhhcCCcEEEEeccCCCCCCCCCC--CCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHH
Q 017997 74 KHVSEADIVFVSVNTPTKTQGLGA--GKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAE 135 (362)
Q Consensus 74 ~a~~~aDvVii~vptp~~~~g~~~--~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~ 135 (362)
++++++|+||++...|... |... -...+...+++.++.+.++. +.+|++ +|.|..+.-
T Consensus 70 ~al~gaD~Vi~~Ag~~~~~-g~~r~dl~~~N~~i~~~i~~~i~~~~--~~~vlv-~SNPv~~~t 129 (313)
T 1hye_A 70 RIIDESDVVIITSGVPRKE-GMSRMDLAKTNAKIVGKYAKKIAEIC--DTKIFV-ITNPVDVMT 129 (313)
T ss_dssp GGGTTCSEEEECCSCCCCT-TCCHHHHHHHHHHHHHHHHHHHHHHC--CCEEEE-CSSSHHHHH
T ss_pred HHhCCCCEEEECCCCCCCC-CCcHHHHHHHHHHHHHHHHHHHHHhC--CeEEEE-ecCcHHHHH
Confidence 6799999999998765432 1000 00112233455556666665 555544 567776643
No 252
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=97.76 E-value=6.3e-05 Score=73.07 Aligned_cols=72 Identities=13% Similarity=0.162 Sum_probs=54.1
Q ss_pred ceEEEEcC----ChhHHHHHHHHHHcCCCCeE-EEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhh
Q 017997 2 VKICCIGA----GYVGGPTMAVIALKCPSIEV-AVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHV 76 (362)
Q Consensus 2 mkI~VIGl----G~~G~~lA~~la~~~~G~~V-~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~ 76 (362)
+||+|||+ |.||..++..|.+..++++| .++|+++++.+.+.+.. + .......+|+++++
T Consensus 21 irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~------g---------~~~~~~~~~~~~ll 85 (438)
T 3btv_A 21 IRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETSIATIQRL------K---------LSNATAFPTLESFA 85 (438)
T ss_dssp EEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHT------T---------CTTCEEESSHHHHH
T ss_pred CEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHc------C---------CCcceeeCCHHHHh
Confidence 58999999 99999999999875247776 57899999988765420 0 01234678888877
Q ss_pred c--CCcEEEEeccC
Q 017997 77 S--EADIVFVSVNT 88 (362)
Q Consensus 77 ~--~aDvVii~vpt 88 (362)
+ +.|+|++|+|+
T Consensus 86 ~~~~vD~V~i~tp~ 99 (438)
T 3btv_A 86 SSSTIDMIVIAIQV 99 (438)
T ss_dssp HCSSCSEEEECSCH
T ss_pred cCCCCCEEEEeCCc
Confidence 5 68999999874
No 253
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=97.76 E-value=8.9e-05 Score=68.67 Aligned_cols=69 Identities=17% Similarity=0.120 Sum_probs=50.0
Q ss_pred CceEEEEcC-ChhHHHHHHHHHHcCCCCeE-EEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhh--
Q 017997 1 MVKICCIGA-GYVGGPTMAVIALKCPSIEV-AVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHV-- 76 (362)
Q Consensus 1 ~mkI~VIGl-G~~G~~lA~~la~~~~G~~V-~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~-- 76 (362)
|+||+|||+ |++|...+..+.+. +.++ .++|+++++. .+.+. .....+.+|+++.+
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~--~~~lvav~d~~~~~~-~~~~~-----------------~~~~~~~~~~~~ll~~ 62 (312)
T 3o9z_A 3 MTRFALTGLAGYIAPRHLKAIKEV--GGVLVASLDPATNVG-LVDSF-----------------FPEAEFFTEPEAFEAY 62 (312)
T ss_dssp CCEEEEECTTSSSHHHHHHHHHHT--TCEEEEEECSSCCCG-GGGGT-----------------CTTCEEESCHHHHHHH
T ss_pred ceEEEEECCChHHHHHHHHHHHhC--CCEEEEEEcCCHHHH-HHHhh-----------------CCCCceeCCHHHHHHH
Confidence 689999999 79999999999887 6664 5668887652 12211 12356677777765
Q ss_pred --------cCCcEEEEeccCC
Q 017997 77 --------SEADIVFVSVNTP 89 (362)
Q Consensus 77 --------~~aDvVii~vptp 89 (362)
.+.|+|+||+|+.
T Consensus 63 ~~~l~~~~~~vD~V~I~tP~~ 83 (312)
T 3o9z_A 63 LEDLRDRGEGVDYLSIASPNH 83 (312)
T ss_dssp HHHHHHTTCCCSEEEECSCGG
T ss_pred hhhhcccCCCCcEEEECCCch
Confidence 5799999998753
No 254
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=97.75 E-value=0.0004 Score=60.25 Aligned_cols=71 Identities=18% Similarity=0.171 Sum_probs=52.0
Q ss_pred ceEEEEcC-ChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCc
Q 017997 2 VKICCIGA-GYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (362)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (362)
|||.|.|+ |.+|..++..|++. |++|++++|++++.+.+......+..-++ ++...+++.++|
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~~~~~~~~D~--------------~d~~~~~~~~~d 64 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRR--GHEVLAVVRDPQKAADRLGATVATLVKEP--------------LVLTEADLDSVD 64 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHTCTTSEEEECCG--------------GGCCHHHHTTCS
T ss_pred CEEEEEcCCCHHHHHHHHHHHHC--CCEEEEEEecccccccccCCCceEEeccc--------------ccccHhhcccCC
Confidence 79999997 99999999999999 99999999999988876442211111111 110014578999
Q ss_pred EEEEeccC
Q 017997 81 IVFVSVNT 88 (362)
Q Consensus 81 vVii~vpt 88 (362)
+||-+...
T Consensus 65 ~vi~~ag~ 72 (224)
T 3h2s_A 65 AVVDALSV 72 (224)
T ss_dssp EEEECCCC
T ss_pred EEEECCcc
Confidence 99999865
No 255
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=97.75 E-value=3.5e-05 Score=70.01 Aligned_cols=73 Identities=10% Similarity=0.140 Sum_probs=47.0
Q ss_pred ceEEEEcC-ChhHHHHHHHHHHcCCCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCC
Q 017997 2 VKICCIGA-GYVGGPTMAVIALKCPSIEVA-VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEA 79 (362)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~la~~~~G~~V~-~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~a 79 (362)
|||+|+|+ |.||..++..+.+. +|++++ ++|++++... +..--...++. ...+..++|+++++.++
T Consensus 6 mkV~V~Ga~G~mG~~~~~~~~~~-~~~elva~~d~~~~~~~----g~d~~~~~g~~-------~~~v~~~~dl~~~l~~~ 73 (273)
T 1dih_A 6 IRVAIAGAGGRMGRQLIQAALAL-EGVQLGAALEREGSSLL----GSDAGELAGAG-------KTGVTVQSSLDAVKDDF 73 (273)
T ss_dssp EEEEETTTTSHHHHHHHHHHHHS-TTEECCCEECCTTCTTC----SCCTTCSSSSS-------CCSCCEESCSTTTTTSC
T ss_pred cEEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEecCchhhh----hhhHHHHcCCC-------cCCceecCCHHHHhcCC
Confidence 79999998 99999999988765 488887 6787653211 10000000000 11345567887778899
Q ss_pred cEEEEec
Q 017997 80 DIVFVSV 86 (362)
Q Consensus 80 DvVii~v 86 (362)
|+||-++
T Consensus 74 DvVIDft 80 (273)
T 1dih_A 74 DVFIDFT 80 (273)
T ss_dssp SEEEECS
T ss_pred CEEEEcC
Confidence 9999664
No 256
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=97.75 E-value=9e-05 Score=68.84 Aligned_cols=69 Identities=26% Similarity=0.210 Sum_probs=49.6
Q ss_pred CceEEEEcC-ChhHHHHHHHHHHcCCCCe-EEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhh--
Q 017997 1 MVKICCIGA-GYVGGPTMAVIALKCPSIE-VAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHV-- 76 (362)
Q Consensus 1 ~mkI~VIGl-G~~G~~lA~~la~~~~G~~-V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~-- 76 (362)
|+||+|||+ |++|...+..+.+. +.+ |.++|+++++. .+.+. .....+.+|+++.+
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~--~~~lvav~d~~~~~~-~~~~~-----------------~~~~~~~~~~~~ll~~ 62 (318)
T 3oa2_A 3 MKNFALIGAAGYIAPRHMRAIKDT--GNCLVSAYDINDSVG-IIDSI-----------------SPQSEFFTEFEFFLDH 62 (318)
T ss_dssp CCEEEEETTTSSSHHHHHHHHHHT--TCEEEEEECSSCCCG-GGGGT-----------------CTTCEEESSHHHHHHH
T ss_pred ceEEEEECCCcHHHHHHHHHHHhC--CCEEEEEEcCCHHHH-HHHhh-----------------CCCCcEECCHHHHHHh
Confidence 689999999 79999999999887 665 45668887642 22211 12346667777755
Q ss_pred ---------cCCcEEEEeccCC
Q 017997 77 ---------SEADIVFVSVNTP 89 (362)
Q Consensus 77 ---------~~aDvVii~vptp 89 (362)
.+.|+|+||+|+.
T Consensus 63 ~~~l~~~~~~~vD~V~I~tP~~ 84 (318)
T 3oa2_A 63 ASNLKRDSATALDYVSICSPNY 84 (318)
T ss_dssp HHHHTTSTTTSCCEEEECSCGG
T ss_pred hhhhhhccCCCCcEEEECCCcH
Confidence 5789999998753
No 257
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=97.73 E-value=8.7e-05 Score=67.21 Aligned_cols=69 Identities=9% Similarity=0.066 Sum_probs=51.1
Q ss_pred CceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCc
Q 017997 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (362)
||||.|.|+|++|..++..|.++ ||+|++++|++++.+.+......+.. +.+ +|++ +.++|
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~------------~D~---~d~~--~~~~d 65 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQ--GWRIIGTSRNPDQMEAIRASGAEPLL------------WPG---EEPS--LDGVT 65 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGG--TCEEEEEESCGGGHHHHHHTTEEEEE------------SSS---SCCC--CTTCC
T ss_pred cCcEEEECCcHHHHHHHHHHHHC--CCEEEEEEcChhhhhhHhhCCCeEEE------------ecc---cccc--cCCCC
Confidence 47999999999999999999999 99999999999888776542211100 000 1222 67899
Q ss_pred EEEEeccC
Q 017997 81 IVFVSVNT 88 (362)
Q Consensus 81 vVii~vpt 88 (362)
+||-+...
T Consensus 66 ~vi~~a~~ 73 (286)
T 3ius_A 66 HLLISTAP 73 (286)
T ss_dssp EEEECCCC
T ss_pred EEEECCCc
Confidence 99998763
No 258
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=97.72 E-value=0.00016 Score=69.52 Aligned_cols=70 Identities=19% Similarity=0.325 Sum_probs=52.2
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCC-eEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCc
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~-~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (362)
++|+|||+|.||..++..+... |. +|+++|+++++.+.+.+.. .......+++.+.+.++|
T Consensus 168 ~~VlIiGaG~iG~~~a~~l~~~--G~~~V~v~~r~~~ra~~la~~~----------------g~~~~~~~~l~~~l~~aD 229 (404)
T 1gpj_A 168 KTVLVVGAGEMGKTVAKSLVDR--GVRAVLVANRTYERAVELARDL----------------GGEAVRFDELVDHLARSD 229 (404)
T ss_dssp CEEEEESCCHHHHHHHHHHHHH--CCSEEEEECSSHHHHHHHHHHH----------------TCEECCGGGHHHHHHTCS
T ss_pred CEEEEEChHHHHHHHHHHHHHC--CCCEEEEEeCCHHHHHHHHHHc----------------CCceecHHhHHHHhcCCC
Confidence 4799999999999999999988 88 9999999998875554310 000101134556678999
Q ss_pred EEEEeccCC
Q 017997 81 IVFVSVNTP 89 (362)
Q Consensus 81 vVii~vptp 89 (362)
+||.|+|.+
T Consensus 230 vVi~at~~~ 238 (404)
T 1gpj_A 230 VVVSATAAP 238 (404)
T ss_dssp EEEECCSSS
T ss_pred EEEEccCCC
Confidence 999998754
No 259
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=97.70 E-value=5e-05 Score=72.89 Aligned_cols=41 Identities=22% Similarity=0.198 Sum_probs=36.4
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHc
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNS 44 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~ 44 (362)
.+|+|+|+|.+|...+..+... |.+|+++|+++++.+.+.+
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~--Ga~V~v~D~~~~~~~~~~~ 213 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANSL--GAIVRAFDTRPEVKEQVQS 213 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCGGGHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHH
Confidence 4799999999999999988887 8999999999988877654
No 260
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=97.66 E-value=9.3e-05 Score=64.47 Aligned_cols=75 Identities=20% Similarity=0.267 Sum_probs=50.6
Q ss_pred Cce-EEEEc-CChhHHHHHHHHH-HcCCCCeEEEEeCCHH-HHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhh
Q 017997 1 MVK-ICCIG-AGYVGGPTMAVIA-LKCPSIEVAVVDISVS-RINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHV 76 (362)
Q Consensus 1 ~mk-I~VIG-lG~~G~~lA~~la-~~~~G~~V~~~d~~~~-~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~ 76 (362)
||| |.|.| .|.+|..++..|+ +. |++|++++|+++ +++.+.+... +..- ....+.-.++..+++
T Consensus 4 mmk~vlVtGasg~iG~~~~~~l~~~~--g~~V~~~~r~~~~~~~~~~~~~~-----~~~~-----~~~D~~d~~~~~~~~ 71 (221)
T 3r6d_A 4 MYXYITILGAAGQIAQXLTATLLTYT--DMHITLYGRQLKTRIPPEIIDHE-----RVTV-----IEGSFQNPGXLEQAV 71 (221)
T ss_dssp SCSEEEEESTTSHHHHHHHHHHHHHC--CCEEEEEESSHHHHSCHHHHTST-----TEEE-----EECCTTCHHHHHHHH
T ss_pred eEEEEEEEeCCcHHHHHHHHHHHhcC--CceEEEEecCccccchhhccCCC-----ceEE-----EECCCCCHHHHHHHH
Confidence 566 99999 5999999999999 78 999999999998 7766631100 0000 000111112334567
Q ss_pred cCCcEEEEecc
Q 017997 77 SEADIVFVSVN 87 (362)
Q Consensus 77 ~~aDvVii~vp 87 (362)
+++|+||.+.+
T Consensus 72 ~~~d~vv~~ag 82 (221)
T 3r6d_A 72 TNAEVVFVGAM 82 (221)
T ss_dssp TTCSEEEESCC
T ss_pred cCCCEEEEcCC
Confidence 89999999975
No 261
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=97.64 E-value=8.3e-05 Score=67.78 Aligned_cols=122 Identities=13% Similarity=0.168 Sum_probs=69.9
Q ss_pred ceEEEEc-CChhHHHHHHHHHHcCCCCeEEEE-eCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCC
Q 017997 2 VKICCIG-AGYVGGPTMAVIALKCPSIEVAVV-DISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEA 79 (362)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~la~~~~G~~V~~~-d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~a 79 (362)
+||+|+| +|.||..++..+.+. +++++++. |+++... .|. ...++.. .....+.+++|+++++.++
T Consensus 22 irV~V~Ga~GrMGr~i~~~v~~~-~~~eLvg~vd~~~~~~----~G~------d~gel~G-~~~~gv~v~~dl~~ll~~a 89 (288)
T 3ijp_A 22 MRLTVVGANGRMGRELITAIQRR-KDVELCAVLVRKGSSF----VDK------DASILIG-SDFLGVRITDDPESAFSNT 89 (288)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTC-SSEEEEEEBCCTTCTT----TTS------BGGGGTT-CSCCSCBCBSCHHHHTTSC
T ss_pred eEEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEecCCccc----ccc------chHHhhc-cCcCCceeeCCHHHHhcCC
Confidence 6899999 999999999988765 47886655 8764210 010 0001000 0012356778999988999
Q ss_pred cEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeC-CccccHHHHHHHHHhccCCCceEEeeCCcc
Q 017997 80 DIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKST-VPVKTAEAIEKILTHNSKGIKFQILSNPEF 158 (362)
Q Consensus 80 DvVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~ST-v~~gt~~~l~~~l~~~~~g~~~~v~~~Pe~ 158 (362)
|++|-+++ | ..+.+.+...++.+.-+|+.|| ..+...+++.+..+ ...++++|.+
T Consensus 90 DVvIDFT~-p-----------------~a~~~~~~~~l~~Gv~vViGTTG~~~e~~~~L~~aa~------~~~~~~a~N~ 145 (288)
T 3ijp_A 90 EGILDFSQ-P-----------------QASVLYANYAAQKSLIHIIGTTGFSKTEEAQIADFAK------YTTIVKSGNM 145 (288)
T ss_dssp SEEEECSC-H-----------------HHHHHHHHHHHHHTCEEEECCCCCCHHHHHHHHHHHT------TSEEEECSCC
T ss_pred CEEEEcCC-H-----------------HHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHhC------cCCEEEECCC
Confidence 99998853 2 2233344444455666666555 22212222322221 2356788876
Q ss_pred c
Q 017997 159 L 159 (362)
Q Consensus 159 ~ 159 (362)
.
T Consensus 146 S 146 (288)
T 3ijp_A 146 S 146 (288)
T ss_dssp C
T ss_pred c
Confidence 5
No 262
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=97.63 E-value=0.00015 Score=68.88 Aligned_cols=70 Identities=16% Similarity=0.260 Sum_probs=50.7
Q ss_pred ceEEEEc-CChhHHH-HH----HHHHHcCCCCeE----------EEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCC
Q 017997 2 VKICCIG-AGYVGGP-TM----AVIALKCPSIEV----------AVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKN 65 (362)
Q Consensus 2 mkI~VIG-lG~~G~~-lA----~~la~~~~G~~V----------~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~ 65 (362)
+||+||| +|.||.. .+ ..+.+.. +..+ .++|+++++.+.+.+.. +.
T Consensus 7 irigiiG~~G~~g~~~h~~~~~~~~~~~~-~~~l~~~~~~~~~~av~~~~~~~a~~~a~~~-----------------~~ 68 (383)
T 3oqb_A 7 LGLIMNGVTGRMGLNQHLIRSIVAIRDQG-GVRLKNGDRIMPDPILVGRSAEKVEALAKRF-----------------NI 68 (383)
T ss_dssp EEEEEESTTSTHHHHTTTTTTHHHHHHHT-SEECTTSCEEEEEEEEECSSSHHHHHHHHHT-----------------TC
T ss_pred eEEEEEeccchhhhhhhHHHHHHHHhhcC-ceeecCCcccceeeEEEcCCHHHHHHHHHHh-----------------CC
Confidence 5899999 9999997 66 6666651 3333 38999999988876421 11
Q ss_pred EEEecCHHhhhc--CCcEEEEeccCC
Q 017997 66 LFFSTDVEKHVS--EADIVFVSVNTP 89 (362)
Q Consensus 66 l~~t~d~~~a~~--~aDvVii~vptp 89 (362)
-.+++|+++.++ +.|+|++|+|+.
T Consensus 69 ~~~~~~~~~ll~~~~iD~V~i~tp~~ 94 (383)
T 3oqb_A 69 ARWTTDLDAALADKNDTMFFDAATTQ 94 (383)
T ss_dssp CCEESCHHHHHHCSSCCEEEECSCSS
T ss_pred CcccCCHHHHhcCCCCCEEEECCCch
Confidence 135688888775 489999998754
No 263
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=97.63 E-value=8.4e-05 Score=69.68 Aligned_cols=85 Identities=19% Similarity=0.226 Sum_probs=54.0
Q ss_pred CceEEEEcCChhHHHHHHHHHHcCCCCeEEE-EeCCHHHHHHHH-cCCCCCCCC-ChHHHHhhhcCCCEEEecCHHhhhc
Q 017997 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAV-VDISVSRINAWN-SDQLPIYEP-GLDGVVKQCRGKNLFFSTDVEKHVS 77 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~la~~~~G~~V~~-~d~~~~~~~~l~-~~~~~~~e~-~l~~~~~~~~~~~l~~t~d~~~a~~ 77 (362)
|+||+|+|+|+||..++..|.++ |+.+|++ .|++++....+. ....+.+.. ..++++. ...+..+.+.++..+
T Consensus 1 ~ikVgIiGaG~iG~~~~r~L~~~-p~~elvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~---~~~v~v~~~~e~l~~ 76 (340)
T 1b7g_O 1 MVNVAVNGYGTIGKRVADAIIKQ-PDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFE---ESGIPVAGTVEDLIK 76 (340)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTC-TTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHH---TTTCCCCCCHHHHHH
T ss_pred CeEEEEEecCHHHHHHHHHHHcC-CCCEEEEEEcCChHHHHHHHHhcCcceecCcCHHHHhc---ccccccccCHhHhhc
Confidence 57999999999999999988865 4667654 477655443332 222333221 2222222 123455567777567
Q ss_pred CCcEEEEeccCC
Q 017997 78 EADIVFVSVNTP 89 (362)
Q Consensus 78 ~aDvVii~vptp 89 (362)
++|+||.|+|..
T Consensus 77 ~vDvV~~aTp~~ 88 (340)
T 1b7g_O 77 TSDIVVDTTPNG 88 (340)
T ss_dssp HCSEEEECCSTT
T ss_pred CCCEEEECCCCc
Confidence 899999997743
No 264
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=97.59 E-value=4.7e-05 Score=71.27 Aligned_cols=85 Identities=12% Similarity=0.181 Sum_probs=52.4
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEE-EeCCHHHHHHHHc-CCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCC
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAV-VDISVSRINAWNS-DQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEA 79 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~-~d~~~~~~~~l~~-~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~a 79 (362)
+||+|+|+|+||..++..|.+. |+.++++ .|++++....+.+ .+...+.. +...+.......+.+..|+++.+.++
T Consensus 3 irVgIiG~G~iG~~~~r~l~~~-~~~elvav~d~~~~~~~~~~~~~g~~~~~~-~~~~v~~~~~~~~~v~~d~~~l~~~v 80 (334)
T 2czc_A 3 VKVGVNGYGTIGKRVAYAVTKQ-DDMELIGITKTKPDFEAYRAKELGIPVYAA-SEEFIPRFEKEGFEVAGTLNDLLEKV 80 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHHTC-TTEEEEEEEESSCSHHHHHHHHTTCCEEES-SGGGHHHHHHHTCCCSCBHHHHHTTC
T ss_pred cEEEEEeEhHHHHHHHHHHhcC-CCCEEEEEEcCCHHHHHHHHHhcCcccccc-ccccceeccCCceEEcCcHHHhccCC
Confidence 5999999999999999998875 4667654 5787766655443 11111100 00000000011234556788877899
Q ss_pred cEEEEeccC
Q 017997 80 DIVFVSVNT 88 (362)
Q Consensus 80 DvVii~vpt 88 (362)
|+|++|+|.
T Consensus 81 DvV~~aTp~ 89 (334)
T 2czc_A 81 DIIVDATPG 89 (334)
T ss_dssp SEEEECCST
T ss_pred CEEEECCCc
Confidence 999999774
No 265
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=97.58 E-value=0.00021 Score=67.74 Aligned_cols=70 Identities=17% Similarity=0.170 Sum_probs=48.1
Q ss_pred eEEEEcCChhHHHHHHHHHHc------CCCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhh
Q 017997 3 KICCIGAGYVGGPTMAVIALK------CPSIEVA-VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKH 75 (362)
Q Consensus 3 kI~VIGlG~~G~~lA~~la~~------~~G~~V~-~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a 75 (362)
||||||+|.||...+..+... .++.+|+ ++|+++++.+++.+.. +.-.+.+|+++.
T Consensus 27 rvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~-----------------g~~~~y~d~~el 89 (393)
T 4fb5_A 27 GIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEF-----------------GFEKATADWRAL 89 (393)
T ss_dssp EEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHH-----------------TCSEEESCHHHH
T ss_pred cEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHh-----------------CCCeecCCHHHH
Confidence 799999999998777665431 1245655 5699999988776420 112567889887
Q ss_pred hc--CCcEEEEeccCC
Q 017997 76 VS--EADIVFVSVNTP 89 (362)
Q Consensus 76 ~~--~aDvVii~vptp 89 (362)
++ +.|+|+||+|+.
T Consensus 90 l~~~~iDaV~IatP~~ 105 (393)
T 4fb5_A 90 IADPEVDVVSVTTPNQ 105 (393)
T ss_dssp HHCTTCCEEEECSCGG
T ss_pred hcCCCCcEEEECCChH
Confidence 75 589999998754
No 266
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=97.57 E-value=0.00016 Score=68.50 Aligned_cols=69 Identities=14% Similarity=0.110 Sum_probs=50.7
Q ss_pred eEEEEcCChhHHHHHHHHHHcCCC-------Ce-EEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHh
Q 017997 3 KICCIGAGYVGGPTMAVIALKCPS-------IE-VAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEK 74 (362)
Q Consensus 3 kI~VIGlG~~G~~lA~~la~~~~G-------~~-V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~ 74 (362)
||||||+|.||...+..+... |+ .+ |.++|+++++.+++.+.. +.-++.+|+++
T Consensus 8 rvgiIG~G~ig~~h~~~~~~~-~~~~~~~~~~~l~av~d~~~~~a~~~a~~~-----------------g~~~~~~d~~~ 69 (390)
T 4h3v_A 8 GIGLIGYAFMGAAHSQAWRSA-PRFFDLPLHPDLNVLCGRDAEAVRAAAGKL-----------------GWSTTETDWRT 69 (390)
T ss_dssp EEEEECHHHHHHHHHHHHHHH-HHHSCCSSEEEEEEEECSSHHHHHHHHHHH-----------------TCSEEESCHHH
T ss_pred cEEEEcCCHHHHHHHHHHHhC-ccccccccCceEEEEEcCCHHHHHHHHHHc-----------------CCCcccCCHHH
Confidence 799999999999888877654 11 14 456799999998776420 11256788988
Q ss_pred hhc--CCcEEEEeccCC
Q 017997 75 HVS--EADIVFVSVNTP 89 (362)
Q Consensus 75 a~~--~aDvVii~vptp 89 (362)
.++ +.|+|+||+|+.
T Consensus 70 ll~~~~iDaV~I~tP~~ 86 (390)
T 4h3v_A 70 LLERDDVQLVDVCTPGD 86 (390)
T ss_dssp HTTCTTCSEEEECSCGG
T ss_pred HhcCCCCCEEEEeCChH
Confidence 775 589999998754
No 267
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=97.55 E-value=0.00014 Score=65.85 Aligned_cols=96 Identities=14% Similarity=0.092 Sum_probs=65.0
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcE
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (362)
.++.|+|+|.+|.+++..|++. |.+|++++|++++.+.+.+- + +... ++++ +.++|+
T Consensus 119 k~vlvlGaGGaaraia~~L~~~--G~~v~V~nRt~~ka~~la~~------------------~-~~~~-~~~~-l~~~Di 175 (269)
T 3phh_A 119 QNALILGAGGSAKALACELKKQ--GLQVSVLNRSSRGLDFFQRL------------------G-CDCF-MEPP-KSAFDL 175 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCTTHHHHHHH------------------T-CEEE-SSCC-SSCCSE
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHC------------------C-CeEe-cHHH-hccCCE
Confidence 4799999999999999999999 89999999999988877520 0 1111 2223 348999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCcccc
Q 017997 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKT 133 (362)
Q Consensus 82 Vii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt 133 (362)
||-|+|..... .+.+. .+ .+...++++.+|++.+..| .|
T Consensus 176 VInaTp~Gm~~-------~~~l~--~~---~l~~~l~~~~~v~D~vY~P-~T 214 (269)
T 3phh_A 176 IINATSASLHN-------ELPLN--KE---VLKGYFKEGKLAYDLAYGF-LT 214 (269)
T ss_dssp EEECCTTCCCC-------SCSSC--HH---HHHHHHHHCSEEEESCCSS-CC
T ss_pred EEEcccCCCCC-------CCCCC--hH---HHHhhCCCCCEEEEeCCCC-ch
Confidence 99997754321 01111 11 1222345678898888776 44
No 268
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=97.53 E-value=6.1e-05 Score=70.54 Aligned_cols=86 Identities=21% Similarity=0.201 Sum_probs=50.6
Q ss_pred CceEEEEcCChhHHHHHHHHHHcCCCCeEEEE-eCCHHHHHHHHc-CCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcC
Q 017997 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVV-DISVSRINAWNS-DQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSE 78 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~-d~~~~~~~~l~~-~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~ 78 (362)
|+||+|+|+|+||..+++.|.++ |+++++++ |++++....+.. .....+. .+...+.......+.+..++++.+.+
T Consensus 1 mikVgIiGaG~iG~~l~r~L~~~-~~~elvav~d~~~~~~~~~~~~~g~~~~~-~~~~~v~~~~~~~l~v~~~~~~~~~~ 78 (337)
T 1cf2_P 1 MKAVAINGYGTVGKRVADAIAQQ-DDMKVIGVSKTRPDFEARMALKKGYDLYV-AIPERVKLFEKAGIEVAGTVDDMLDE 78 (337)
T ss_dssp CEEEEEECCSTTHHHHHHHHHTS-SSEEEEEEEESSCSHHHHHHHHTTCCEEE-SSGGGHHHHHHTTCCCCEEHHHHHHT
T ss_pred CeEEEEEeECHHHHHHHHHHHcC-CCcEEEEEEcCChhHHHHhcCCcchhhcc-ccccceeeecCCceEEcCCHHHHhcC
Confidence 68999999999999999999875 46777654 666544443322 1111111 01110000001224444456666679
Q ss_pred CcEEEEeccC
Q 017997 79 ADIVFVSVNT 88 (362)
Q Consensus 79 aDvVii~vpt 88 (362)
+|+||.|+|.
T Consensus 79 vDvV~~atp~ 88 (337)
T 1cf2_P 79 ADIVIDCTPE 88 (337)
T ss_dssp CSEEEECCST
T ss_pred CCEEEECCCc
Confidence 9999999764
No 269
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=97.51 E-value=0.00024 Score=66.24 Aligned_cols=61 Identities=13% Similarity=0.205 Sum_probs=45.4
Q ss_pred ceEEEEcCChhHH-HHHHHHHHcCCCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcC-
Q 017997 2 VKICCIGAGYVGG-PTMAVIALKCPSIEVA-VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSE- 78 (362)
Q Consensus 2 mkI~VIGlG~~G~-~lA~~la~~~~G~~V~-~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~- 78 (362)
+||+|||+|.||. ..+..|.+. ++.+|+ ++|+++++ .++...+|+++.+++
T Consensus 26 ~rvgiiG~G~ig~~~~~~~l~~~-~~~~lvav~d~~~~~-------------------------~g~~~~~~~~~ll~~~ 79 (330)
T 4ew6_A 26 INLAIVGVGKIVRDQHLPSIAKN-ANFKLVATASRHGTV-------------------------EGVNSYTTIEAMLDAE 79 (330)
T ss_dssp EEEEEECCSHHHHHTHHHHHHHC-TTEEEEEEECSSCCC-------------------------TTSEEESSHHHHHHHC
T ss_pred ceEEEEecCHHHHHHHHHHHHhC-CCeEEEEEEeCChhh-------------------------cCCCccCCHHHHHhCC
Confidence 5899999999998 688888775 477765 46877431 124567888887654
Q ss_pred --CcEEEEeccC
Q 017997 79 --ADIVFVSVNT 88 (362)
Q Consensus 79 --aDvVii~vpt 88 (362)
.|+|++|+|+
T Consensus 80 ~~vD~V~i~tp~ 91 (330)
T 4ew6_A 80 PSIDAVSLCMPP 91 (330)
T ss_dssp TTCCEEEECSCH
T ss_pred CCCCEEEEeCCc
Confidence 8999999774
No 270
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=97.51 E-value=0.00081 Score=62.55 Aligned_cols=114 Identities=14% Similarity=0.066 Sum_probs=69.7
Q ss_pred CceEEEEcCChhHHH-HHHHHHHcCCCCeEEEEeCCH--HHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhh-
Q 017997 1 MVKICCIGAGYVGGP-TMAVIALKCPSIEVAVVDISV--SRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHV- 76 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~-lA~~la~~~~G~~V~~~d~~~--~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~- 76 (362)
||||.|||+|.+|.+ +|..|.+. |++|+++|.++ ...+.|.+...+ +..-.+++...
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~--G~~V~~~D~~~~~~~~~~L~~~gi~-----------------v~~g~~~~~l~~ 64 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEA--GFEVSGCDAKMYPPMSTQLEALGID-----------------VYEGFDAAQLDE 64 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHT--TCEEEEEESSCCTTHHHHHHHTTCE-----------------EEESCCGGGGGS
T ss_pred CcEEEEEEECHHHHHHHHHHHHhC--CCEEEEEcCCCCcHHHHHHHhCCCE-----------------EECCCCHHHcCC
Confidence 689999999999996 88889898 99999999864 234445432111 22223444423
Q ss_pred cCCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHH----------HHHhh-cCCCCEEEEeeCCccccHHH-HHHHHHhc
Q 017997 77 SEADIVFVSVNTPTKTQGLGAGKAADLTYWESAAR----------VIADV-SKSDKIVVEKSTVPVKTAEA-IEKILTHN 144 (362)
Q Consensus 77 ~~aDvVii~vptp~~~~g~~~~~~~d~~~l~~~~~----------~i~~~-l~~~~iVv~~STv~~gt~~~-l~~~l~~~ 144 (362)
.++|+||++-.-|.+ .| .+..+.+ -+... .+...+|-++.|..-.||.. +..+|++.
T Consensus 65 ~~~d~vV~Spgi~~~--------~p---~~~~a~~~gi~v~~~~e~~~~~~~~~~~~IaVTGTnGKTTTt~ll~~iL~~~ 133 (326)
T 3eag_A 65 FKADVYVIGNVAKRG--------MD---VVEAILNLGLPYISGPQWLSENVLHHHWVLGVAGTHGKTTTASMLAWVLEYA 133 (326)
T ss_dssp CCCSEEEECTTCCTT--------CH---HHHHHHHTTCCEEEHHHHHHHHTGGGSEEEEEESSSCHHHHHHHHHHHHHHT
T ss_pred CCCCEEEECCCcCCC--------CH---HHHHHHHcCCcEEeHHHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHHc
Confidence 479999987443322 12 2333322 12332 33446777777776666654 56777664
No 271
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=97.50 E-value=0.00016 Score=70.63 Aligned_cols=41 Identities=27% Similarity=0.449 Sum_probs=39.1
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHc
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNS 44 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~ 44 (362)
|||-|+|+|.+|..+|..|.+. ||+|+++|.|+++++.+.+
T Consensus 4 M~iiI~G~G~vG~~la~~L~~~--~~~v~vId~d~~~~~~~~~ 44 (461)
T 4g65_A 4 MKIIILGAGQVGGTLAENLVGE--NNDITIVDKDGDRLRELQD 44 (461)
T ss_dssp EEEEEECCSHHHHHHHHHTCST--TEEEEEEESCHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCCEEEEECCHHHHHHHHH
Confidence 8999999999999999999988 9999999999999998875
No 272
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=97.50 E-value=0.00019 Score=68.41 Aligned_cols=41 Identities=17% Similarity=0.229 Sum_probs=35.9
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHc
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNS 44 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~ 44 (362)
.+|+|+|+|.+|...+..+... |.+|+++|+++++.+.+.+
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~--Ga~V~~~d~~~~~~~~~~~ 213 (384)
T 1l7d_A 173 ARVLVFGVGVAGLQAIATAKRL--GAVVMATDVRAATKEQVES 213 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCSTTHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH
Confidence 4799999999999999988887 8899999999888776654
No 273
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=97.49 E-value=0.00014 Score=59.09 Aligned_cols=98 Identities=10% Similarity=0.007 Sum_probs=63.8
Q ss_pred ceEEEEcC----ChhHHHHHHHHHHcCCCCeEEEEeCCHHHH-HHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhh
Q 017997 2 VKICCIGA----GYVGGPTMAVIALKCPSIEVAVVDISVSRI-NAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHV 76 (362)
Q Consensus 2 mkI~VIGl----G~~G~~lA~~la~~~~G~~V~~~d~~~~~~-~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~ 76 (362)
.+|+|||+ |.+|..++.+|.+. ||+ +|++|+.+. +.+ ..+.+..+++++.
T Consensus 14 ~~vaVvGas~~~g~~G~~~~~~l~~~--G~~--v~~vnp~~~~~~i---------------------~G~~~~~sl~el~ 68 (140)
T 1iuk_A 14 KTIAVLGAHKDPSRPAHYVPRYLREQ--GYR--VLPVNPRFQGEEL---------------------FGEEAVASLLDLK 68 (140)
T ss_dssp CEEEEETCCSSTTSHHHHHHHHHHHT--TCE--EEEECGGGTTSEE---------------------TTEECBSSGGGCC
T ss_pred CEEEEECCCCCCCChHHHHHHHHHHC--CCE--EEEeCCCcccCcC---------------------CCEEecCCHHHCC
Confidence 47999999 89999999999998 897 666666531 111 1356667777756
Q ss_pred cCCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhc
Q 017997 77 SEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHN 144 (362)
Q Consensus 77 ~~aDvVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~ 144 (362)
+..|++++++|.+ .+.++++++.+. ....+++..++. .+++.+..++.
T Consensus 69 ~~vDlavi~vp~~---------------~~~~v~~~~~~~-gi~~i~~~~g~~----~~~~~~~a~~~ 116 (140)
T 1iuk_A 69 EPVDILDVFRPPS---------------ALMDHLPEVLAL-RPGLVWLQSGIR----HPEFEKALKEA 116 (140)
T ss_dssp SCCSEEEECSCHH---------------HHTTTHHHHHHH-CCSCEEECTTCC----CHHHHHHHHHT
T ss_pred CCCCEEEEEeCHH---------------HHHHHHHHHHHc-CCCEEEEcCCcC----HHHHHHHHHHc
Confidence 6899999999842 234455555543 234555532222 35565555554
No 274
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=97.48 E-value=0.00077 Score=62.70 Aligned_cols=74 Identities=19% Similarity=0.304 Sum_probs=52.7
Q ss_pred ceEEEEcC-ChhHHHHHHHHHHcCCCC-------eEEEEeCCH--HHHH----HHHcCCCCCCCCChHHHHhhhcCCCEE
Q 017997 2 VKICCIGA-GYVGGPTMAVIALKCPSI-------EVAVVDISV--SRIN----AWNSDQLPIYEPGLDGVVKQCRGKNLF 67 (362)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~la~~~~G~-------~V~~~d~~~--~~~~----~l~~~~~~~~e~~l~~~~~~~~~~~l~ 67 (362)
|||.|+|. |++|.+++..|+.. |+ +|+++|+++ ++.+ .+.....++ .+.++
T Consensus 5 mkVlVtGaaGfIG~~l~~~L~~~--g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~-------------~~di~ 69 (327)
T 1y7t_A 5 VRVAVTGAAGQIGYSLLFRIAAG--EMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPL-------------LAGLE 69 (327)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTT--TTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTT-------------EEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhC--CCCCCCCCCEEEEEeCCCchhhccchhhhhhcccccc-------------cCCeE
Confidence 79999996 99999999999987 75 899999974 2222 222211111 02355
Q ss_pred EecCHHhhhcCCcEEEEeccCCC
Q 017997 68 FSTDVEKHVSEADIVFVSVNTPT 90 (362)
Q Consensus 68 ~t~d~~~a~~~aDvVii~vptp~ 90 (362)
.+++..++++++|+||.+...+.
T Consensus 70 ~~~~~~~a~~~~D~Vih~Ag~~~ 92 (327)
T 1y7t_A 70 ATDDPKVAFKDADYALLVGAAPR 92 (327)
T ss_dssp EESCHHHHTTTCSEEEECCCCCC
T ss_pred eccChHHHhCCCCEEEECCCcCC
Confidence 66777778999999999876553
No 275
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=97.47 E-value=0.00023 Score=67.34 Aligned_cols=99 Identities=20% Similarity=0.326 Sum_probs=66.3
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCE-EEe---cCHHhhhc
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNL-FFS---TDVEKHVS 77 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l-~~t---~d~~~a~~ 77 (362)
.+|.|+|+|.+|...+..+... |.+|+++|+++++.+.+.+-.. ..+ ... .+..+.+.
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~--Ga~V~v~dr~~~r~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~ 229 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGL--GAQVQIFDINVERLSYLETLFG----------------SRVELLYSNSAEIETAVA 229 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHG----------------GGSEEEECCHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHhhC----------------ceeEeeeCCHHHHHHHHc
Confidence 4799999999999999999988 8899999999999887754100 011 111 23445577
Q ss_pred CCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCc
Q 017997 78 EADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVP 130 (362)
Q Consensus 78 ~aDvVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~ 130 (362)
++|+||-|++.|... .+.+ ..+...+.++++.+|++.+..+
T Consensus 230 ~~DvVI~~~~~~~~~-------~~~l-----i~~~~~~~~~~g~~ivdv~~~~ 270 (361)
T 1pjc_A 230 EADLLIGAVLVPGRR-------APIL-----VPASLVEQMRTGSVIVDVAVDQ 270 (361)
T ss_dssp TCSEEEECCCCTTSS-------CCCC-----BCHHHHTTSCTTCEEEETTCTT
T ss_pred CCCEEEECCCcCCCC-------CCee-----cCHHHHhhCCCCCEEEEEecCC
Confidence 899999998765321 1110 0123345677888888755443
No 276
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=97.46 E-value=8.3e-05 Score=65.67 Aligned_cols=68 Identities=15% Similarity=0.096 Sum_probs=49.9
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecC---HHhh-hc
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTD---VEKH-VS 77 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d---~~~a-~~ 77 (362)
++|.|+|+|.+|..+|..|.+. |+ |+++|+++++++.+..+...+. +. .++ +.++ +.
T Consensus 10 ~~viI~G~G~~G~~la~~L~~~--g~-v~vid~~~~~~~~~~~~~~~i~-------------gd---~~~~~~l~~a~i~ 70 (234)
T 2aef_A 10 RHVVICGWSESTLECLRELRGS--EV-FVLAEDENVRKKVLRSGANFVH-------------GD---PTRVSDLEKANVR 70 (234)
T ss_dssp CEEEEESCCHHHHHHHHHSTTS--EE-EEEESCGGGHHHHHHTTCEEEE-------------SC---TTCHHHHHHTTCT
T ss_pred CEEEEECCChHHHHHHHHHHhC--Ce-EEEEECCHHHHHHHhcCCeEEE-------------cC---CCCHHHHHhcCcc
Confidence 5899999999999999999988 89 9999999999887763211111 00 012 2222 67
Q ss_pred CCcEEEEeccC
Q 017997 78 EADIVFVSVNT 88 (362)
Q Consensus 78 ~aDvVii~vpt 88 (362)
++|.||++++.
T Consensus 71 ~ad~vi~~~~~ 81 (234)
T 2aef_A 71 GARAVIVDLES 81 (234)
T ss_dssp TCSEEEECCSC
T ss_pred hhcEEEEcCCC
Confidence 99999999763
No 277
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=97.46 E-value=0.00014 Score=67.28 Aligned_cols=70 Identities=23% Similarity=0.275 Sum_probs=45.8
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeE-EEEeCCHHH-HHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhh---
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEV-AVVDISVSR-INAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHV--- 76 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V-~~~d~~~~~-~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~--- 76 (362)
+||+|||+|++|..++..+.++.++.++ .++|+++++ ...+.+. .+....+++.++.+
T Consensus 5 irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~-----------------~g~~~~~~~~e~ll~~~ 67 (312)
T 1nvm_B 5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQR-----------------MGVTTTYAGVEGLIKLP 67 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHH-----------------TTCCEESSHHHHHHHSG
T ss_pred CEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHH-----------------cCCCcccCCHHHHHhcc
Confidence 5899999999999999998763346654 467998776 4444321 01112234445433
Q ss_pred --cCCcEEEEeccC
Q 017997 77 --SEADIVFVSVNT 88 (362)
Q Consensus 77 --~~aDvVii~vpt 88 (362)
.+.|+||+|+|+
T Consensus 68 ~~~~iDvV~~atp~ 81 (312)
T 1nvm_B 68 EFADIDFVFDATSA 81 (312)
T ss_dssp GGGGEEEEEECSCH
T ss_pred CCCCCcEEEECCCh
Confidence 458999999773
No 278
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=97.45 E-value=0.00033 Score=61.58 Aligned_cols=71 Identities=17% Similarity=0.164 Sum_probs=54.4
Q ss_pred ceEEEEcC-ChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCC-CCCCCChHHHHhhhcCCCEEEecCHHhhhcCC
Q 017997 2 VKICCIGA-GYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQL-PIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEA 79 (362)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~-~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~a 79 (362)
|+|.|.|+ |.+|..++..|++. |++|++++|++++.+.+.+... .+.. ..+. .+..+++.++
T Consensus 22 ~~ilVtGatG~iG~~l~~~L~~~--G~~V~~~~R~~~~~~~~~~~~~~~~~~------------~Dl~--~~~~~~~~~~ 85 (236)
T 3e8x_A 22 MRVLVVGANGKVARYLLSELKNK--GHEPVAMVRNEEQGPELRERGASDIVV------------ANLE--EDFSHAFASI 85 (236)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHTTCSEEEE------------CCTT--SCCGGGGTTC
T ss_pred CeEEEECCCChHHHHHHHHHHhC--CCeEEEEECChHHHHHHHhCCCceEEE------------cccH--HHHHHHHcCC
Confidence 78999997 99999999999999 9999999999998887765322 1111 1111 4455668899
Q ss_pred cEEEEeccC
Q 017997 80 DIVFVSVNT 88 (362)
Q Consensus 80 DvVii~vpt 88 (362)
|+||-+...
T Consensus 86 D~vi~~ag~ 94 (236)
T 3e8x_A 86 DAVVFAAGS 94 (236)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999764
No 279
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=97.45 E-value=5.6e-05 Score=66.01 Aligned_cols=73 Identities=25% Similarity=0.296 Sum_probs=50.0
Q ss_pred CceEEEEc-CChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCC
Q 017997 1 MVKICCIG-AGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEA 79 (362)
Q Consensus 1 ~mkI~VIG-lG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~a 79 (362)
||+|.|.| .|++|..++..|++. |++|++++|++++.+.+..+ ..+. ...+.-..+..++++++
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~-~~~~------------~~Dl~d~~~~~~~~~~~ 68 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNR--GFEVTAVVRHPEKIKIENEH-LKVK------------KADVSSLDEVCEVCKGA 68 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTT--TCEEEEECSCGGGCCCCCTT-EEEE------------CCCTTCHHHHHHHHTTC
T ss_pred CCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEEcCcccchhccCc-eEEE------------EecCCCHHHHHHHhcCC
Confidence 57999999 599999999999999 99999999997764322110 0000 01111112344567899
Q ss_pred cEEEEeccC
Q 017997 80 DIVFVSVNT 88 (362)
Q Consensus 80 DvVii~vpt 88 (362)
|+||-+...
T Consensus 69 d~vi~~a~~ 77 (227)
T 3dhn_A 69 DAVISAFNP 77 (227)
T ss_dssp SEEEECCCC
T ss_pred CEEEEeCcC
Confidence 999999764
No 280
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=97.44 E-value=0.00039 Score=56.75 Aligned_cols=97 Identities=10% Similarity=-0.010 Sum_probs=62.5
Q ss_pred ceEEEEcC----ChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhc
Q 017997 2 VKICCIGA----GYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS 77 (362)
Q Consensus 2 mkI~VIGl----G~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~ 77 (362)
.+|+|||+ |.+|..++..|.+. ||+ +|++|+.. +.+ ..+.+..++++...
T Consensus 23 ~~iaVVGas~~~g~~G~~~~~~l~~~--G~~--v~~Vnp~~-~~i---------------------~G~~~y~sl~~l~~ 76 (144)
T 2d59_A 23 KKIALVGASPKPERDANIVMKYLLEH--GYD--VYPVNPKY-EEV---------------------LGRKCYPSVLDIPD 76 (144)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHT--TCE--EEEECTTC-SEE---------------------TTEECBSSGGGCSS
T ss_pred CEEEEEccCCCCCchHHHHHHHHHHC--CCE--EEEECCCC-CeE---------------------CCeeccCCHHHcCC
Confidence 47999999 79999999999998 898 45555542 111 13566677777666
Q ss_pred CCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhc
Q 017997 78 EADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHN 144 (362)
Q Consensus 78 ~aDvVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~ 144 (362)
..|++++|+|.+ .+.++++++.+. ..+.+++ .+.. ..+++.+.+++.
T Consensus 77 ~vDlvvi~vp~~---------------~~~~vv~~~~~~-gi~~i~~-~~g~---~~~~l~~~a~~~ 123 (144)
T 2d59_A 77 KIEVVDLFVKPK---------------LTMEYVEQAIKK-GAKVVWF-QYNT---YNREASKKADEA 123 (144)
T ss_dssp CCSEEEECSCHH---------------HHHHHHHHHHHH-TCSEEEE-CTTC---CCHHHHHHHHHT
T ss_pred CCCEEEEEeCHH---------------HHHHHHHHHHHc-CCCEEEE-CCCc---hHHHHHHHHHHc
Confidence 899999998742 346666666554 2334443 3222 135565555554
No 281
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=97.44 E-value=0.00037 Score=67.82 Aligned_cols=75 Identities=16% Similarity=0.266 Sum_probs=51.8
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcE
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (362)
++|.|+|+|.+|..++..|++. |++|+++|+++++.+.+.+..... .. + ...+.-.++..++++++|+
T Consensus 4 k~VlViGaG~iG~~ia~~L~~~--G~~V~v~~R~~~~a~~la~~~~~~-----~~-~----~~Dv~d~~~l~~~l~~~Dv 71 (450)
T 1ff9_A 4 KSVLMLGSGFVTRPTLDVLTDS--GIKVTVACRTLESAKKLSAGVQHS-----TP-I----SLDVNDDAALDAEVAKHDL 71 (450)
T ss_dssp CEEEEECCSTTHHHHHHHHHTT--TCEEEEEESSHHHHHHTTTTCTTE-----EE-E----ECCTTCHHHHHHHHTTSSE
T ss_pred CEEEEECCCHHHHHHHHHHHhC--cCEEEEEECCHHHHHHHHHhcCCc-----eE-E----EeecCCHHHHHHHHcCCcE
Confidence 5899999999999999999988 899999999999988775421000 00 0 0000000123355779999
Q ss_pred EEEeccC
Q 017997 82 VFVSVNT 88 (362)
Q Consensus 82 Vii~vpt 88 (362)
||.|+|.
T Consensus 72 VIn~a~~ 78 (450)
T 1ff9_A 72 VISLIPY 78 (450)
T ss_dssp EEECCC-
T ss_pred EEECCcc
Confidence 9999874
No 282
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=97.44 E-value=0.00018 Score=65.63 Aligned_cols=100 Identities=11% Similarity=0.061 Sum_probs=66.0
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCC-eEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCc
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~-~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (362)
+++.|+|+|.+|.+++..|++. |. +|++++|++++.+++.+.. .. .+.+... ++++...++|
T Consensus 127 k~vlvlGaGg~g~aia~~L~~~--G~~~v~v~~R~~~~a~~la~~~------------~~--~~~~~~~-~~~~l~~~aD 189 (281)
T 3o8q_A 127 ATILLIGAGGAARGVLKPLLDQ--QPASITVTNRTFAKAEQLAELV------------AA--YGEVKAQ-AFEQLKQSYD 189 (281)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT--CCSEEEEEESSHHHHHHHHHHH------------GG--GSCEEEE-EGGGCCSCEE
T ss_pred CEEEEECchHHHHHHHHHHHhc--CCCeEEEEECCHHHHHHHHHHh------------hc--cCCeeEe-eHHHhcCCCC
Confidence 4799999999999999999998 85 9999999999988776420 00 0123332 3344337899
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCcccc
Q 017997 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKT 133 (362)
Q Consensus 81 vVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt 133 (362)
+||-|+|.....+ .+.+. ...++++.+|++.+..|..|
T Consensus 190 iIInaTp~gm~~~------~~~l~---------~~~l~~~~~V~DlvY~P~~T 227 (281)
T 3o8q_A 190 VIINSTSASLDGE------LPAID---------PVIFSSRSVCYDMMYGKGYT 227 (281)
T ss_dssp EEEECSCCCC----------CSCC---------GGGEEEEEEEEESCCCSSCC
T ss_pred EEEEcCcCCCCCC------CCCCC---------HHHhCcCCEEEEecCCCccC
Confidence 9999987643210 11110 12456778888877766444
No 283
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=97.43 E-value=0.00069 Score=64.00 Aligned_cols=113 Identities=16% Similarity=0.254 Sum_probs=68.3
Q ss_pred ceEEEEc-CChhHHHHHHHHHHcCCCC-----eEEEEeCCHHH----HH----HHHcCCCCCCCCChHHHHhhhcCCCEE
Q 017997 2 VKICCIG-AGYVGGPTMAVIALKCPSI-----EVAVVDISVSR----IN----AWNSDQLPIYEPGLDGVVKQCRGKNLF 67 (362)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~la~~~~G~-----~V~~~d~~~~~----~~----~l~~~~~~~~e~~l~~~~~~~~~~~l~ 67 (362)
+||+|+| +|.+|.++|..++.. +. ++.++|.+.+. ++ .|+....|+ ....+
T Consensus 33 ~KV~ViGAaG~VG~~la~~l~~~--~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~-------------~~~v~ 97 (375)
T 7mdh_A 33 VNIAVSGAAGMISNHLLFKLASG--EVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPL-------------LREVS 97 (375)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHT--TTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTT-------------EEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHcC--CcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhh-------------cCCcE
Confidence 6899999 799999999999986 33 37776654332 32 223221111 11345
Q ss_pred EecCHHhhhcCCcEEEEeccCCCCCCCCCCCCCCC-----hHHHHHHHHHHHhhcCCCCEEEEeeCCccccH
Q 017997 68 FSTDVEKHVSEADIVFVSVNTPTKTQGLGAGKAAD-----LTYWESAARVIADVSKSDKIVVEKSTVPVKTA 134 (362)
Q Consensus 68 ~t~d~~~a~~~aDvVii~vptp~~~~g~~~~~~~d-----~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~ 134 (362)
.+++..+++++||+||++-..|..+ |+ + +.| .+.+++..+.|.++..++.+|++- |.|..+.
T Consensus 98 i~~~~y~~~~daDvVVitag~prkp-G~--t-R~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVv-sNPvD~~ 164 (375)
T 7mdh_A 98 IGIDPYEVFEDVDWALLIGAKPRGP-GM--E-RAALLDINGQIFADQGKALNAVASKNVKVLVV-GNPCNTN 164 (375)
T ss_dssp EESCHHHHTTTCSEEEECCCCCCCT-TC--C-HHHHHHHHHHHHHHHHHHHHHHSCTTCEEEEC-SSSHHHH
T ss_pred EecCCHHHhCCCCEEEEcCCCCCCC-CC--C-HHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEe-cCchhHH
Confidence 5666566799999999987665432 21 1 122 244455556666665566666553 3565543
No 284
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=97.42 E-value=0.00036 Score=63.84 Aligned_cols=65 Identities=18% Similarity=0.172 Sum_probs=47.7
Q ss_pred ceEEEEcC-ChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhc--C
Q 017997 2 VKICCIGA-GYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS--E 78 (362)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~--~ 78 (362)
+||+|+|+ |.||..++..+.+. |++ .++++|+.+. +. + ...+...++++++.+ +
T Consensus 8 ~rVaViG~sG~~G~~~~~~l~~~--g~~-~V~~V~p~~~-----g~----~-----------~~G~~vy~sl~el~~~~~ 64 (288)
T 2nu8_A 8 TKVICQGFTGSQGTFHSEQAIAY--GTK-MVGGVTPGKG-----GT----T-----------HLGLPVFNTVREAVAATG 64 (288)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH--TCE-EEEEECTTCT-----TC----E-----------ETTEEEESSHHHHHHHHC
T ss_pred CEEEEECCCChHHHHHHHHHHHC--CCe-EEEEeCCCcc-----cc----e-----------eCCeeccCCHHHHhhcCC
Confidence 58999998 99999999999987 888 4455555321 10 0 013667788888777 8
Q ss_pred CcEEEEeccCC
Q 017997 79 ADIVFVSVNTP 89 (362)
Q Consensus 79 aDvVii~vptp 89 (362)
+|++++|+|.+
T Consensus 65 ~D~viI~tP~~ 75 (288)
T 2nu8_A 65 ATASVIYVPAP 75 (288)
T ss_dssp CCEEEECCCGG
T ss_pred CCEEEEecCHH
Confidence 99999998853
No 285
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=97.39 E-value=0.00016 Score=63.83 Aligned_cols=73 Identities=15% Similarity=0.253 Sum_probs=48.7
Q ss_pred CceEEEEc-CChhHHHHHHHHHHcCCC-CeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcC
Q 017997 1 MVKICCIG-AGYVGGPTMAVIALKCPS-IEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSE 78 (362)
Q Consensus 1 ~mkI~VIG-lG~~G~~lA~~la~~~~G-~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~ 78 (362)
||+|.|.| .|.+|..++..|++. | ++|++++|++++.+.+........ ...+.-..+.++++++
T Consensus 23 mk~vlVtGatG~iG~~l~~~L~~~--G~~~V~~~~R~~~~~~~~~~~~~~~~------------~~Dl~d~~~~~~~~~~ 88 (236)
T 3qvo_A 23 MKNVLILGAGGQIARHVINQLADK--QTIKQTLFARQPAKIHKPYPTNSQII------------MGDVLNHAALKQAMQG 88 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTC--TTEEEEEEESSGGGSCSSCCTTEEEE------------ECCTTCHHHHHHHHTT
T ss_pred ccEEEEEeCCcHHHHHHHHHHHhC--CCceEEEEEcChhhhcccccCCcEEE------------EecCCCHHHHHHHhcC
Confidence 45799999 699999999999999 8 899999999876543221100000 0111111234456789
Q ss_pred CcEEEEecc
Q 017997 79 ADIVFVSVN 87 (362)
Q Consensus 79 aDvVii~vp 87 (362)
+|+||.+.+
T Consensus 89 ~D~vv~~a~ 97 (236)
T 3qvo_A 89 QDIVYANLT 97 (236)
T ss_dssp CSEEEEECC
T ss_pred CCEEEEcCC
Confidence 999998875
No 286
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=97.39 E-value=0.00012 Score=63.66 Aligned_cols=104 Identities=12% Similarity=0.186 Sum_probs=62.9
Q ss_pred ceEEEEc-CChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEE-ecCHHhhhcCC
Q 017997 2 VKICCIG-AGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFF-STDVEKHVSEA 79 (362)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~-t~d~~~a~~~a 79 (362)
|||.|.| .|.+|..++..|++. |++|++++|++++.+.+ ....+. .+.+.- ..+..++++++
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~--~~~~~~------------~~D~~d~~~~~~~~~~~~ 64 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTT--DYQIYAGARKVEQVPQY--NNVKAV------------HFDVDWTPEEMAKQLHGM 64 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTS--SCEEEEEESSGGGSCCC--TTEEEE------------ECCTTSCHHHHHTTTTTC
T ss_pred CeEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCccchhhc--CCceEE------------EecccCCHHHHHHHHcCC
Confidence 7999999 799999999999999 99999999997654322 000000 011111 12334557789
Q ss_pred cEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEee
Q 017997 80 DIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKS 127 (362)
Q Consensus 80 DvVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~S 127 (362)
|+||-+....... ....++......++.+.+. ..+.+|..+|
T Consensus 65 d~vi~~ag~~~~~-----~~~~n~~~~~~l~~a~~~~-~~~~iv~~SS 106 (219)
T 3dqp_A 65 DAIINVSGSGGKS-----LLKVDLYGAVKLMQAAEKA-EVKRFILLST 106 (219)
T ss_dssp SEEEECCCCTTSS-----CCCCCCHHHHHHHHHHHHT-TCCEEEEECC
T ss_pred CEEEECCcCCCCC-----cEeEeHHHHHHHHHHHHHh-CCCEEEEECc
Confidence 9999998654321 1234455455555555432 3344554443
No 287
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=97.38 E-value=0.0011 Score=63.37 Aligned_cols=90 Identities=11% Similarity=0.100 Sum_probs=65.9
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHH------HHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhh
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVS------RINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKH 75 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~------~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a 75 (362)
.+|+|||.|.-|.+-|.+|.+. |.+|++=-|... ..++..+ .++++. +++++
T Consensus 38 K~IaVIGyGsQG~AqAlNLRDS--Gv~V~Vglr~~s~~e~~~S~~~A~~-------------------~Gf~v~-~~~eA 95 (491)
T 3ulk_A 38 KKVVIVGCGAQGLNQGLNMRDS--GLDISYALRKEAIAEKRASWRKATE-------------------NGFKVG-TYEEL 95 (491)
T ss_dssp SEEEEESCSHHHHHHHHHHHHT--TCEEEEEECHHHHHTTCHHHHHHHH-------------------TTCEEE-EHHHH
T ss_pred CEEEEeCCChHhHHHHhHHHhc--CCcEEEEeCCCCcccccchHHHHHH-------------------CCCEec-CHHHH
Confidence 5899999999999999999999 999887655221 1112211 234443 47788
Q ss_pred hcCCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeC
Q 017997 76 VSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKST 128 (362)
Q Consensus 76 ~~~aDvVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~ST 128 (362)
++.+|+|++-+|... -.++.+.|.+++++|+.+.....
T Consensus 96 ~~~ADvV~~L~PD~~---------------q~~vy~~I~p~lk~G~~L~faHG 133 (491)
T 3ulk_A 96 IPQADLVINLTPDKQ---------------HSDVVRTVQPLMKDGAALGYSHG 133 (491)
T ss_dssp GGGCSEEEECSCGGG---------------HHHHHHHHGGGSCTTCEEEESSC
T ss_pred HHhCCEEEEeCChhh---------------HHHHHHHHHhhCCCCCEEEecCc
Confidence 999999999987422 13456789999999999876544
No 288
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=97.38 E-value=0.00039 Score=67.99 Aligned_cols=72 Identities=18% Similarity=0.309 Sum_probs=52.5
Q ss_pred CceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEE----ecCHHhhh
Q 017997 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFF----STDVEKHV 76 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~----t~d~~~a~ 76 (362)
+++|.|+|+|.+|.+++..|++.+ |++|+++||++++.+.+.+. ..+ ..+.. .+++.+++
T Consensus 23 ~k~VlIiGAGgiG~aia~~L~~~~-g~~V~v~~R~~~ka~~la~~-~~~--------------~~~~~D~~d~~~l~~~l 86 (467)
T 2axq_A 23 GKNVLLLGSGFVAQPVIDTLAAND-DINVTVACRTLANAQALAKP-SGS--------------KAISLDVTDDSALDKVL 86 (467)
T ss_dssp CEEEEEECCSTTHHHHHHHHHTST-TEEEEEEESSHHHHHHHHGG-GTC--------------EEEECCTTCHHHHHHHH
T ss_pred CCEEEEECChHHHHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHh-cCC--------------cEEEEecCCHHHHHHHH
Confidence 358999999999999999999863 68999999999999887642 000 00011 01334557
Q ss_pred cCCcEEEEeccC
Q 017997 77 SEADIVFVSVNT 88 (362)
Q Consensus 77 ~~aDvVii~vpt 88 (362)
+++|+||.|+|.
T Consensus 87 ~~~DvVIn~tp~ 98 (467)
T 2axq_A 87 ADNDVVISLIPY 98 (467)
T ss_dssp HTSSEEEECSCG
T ss_pred cCCCEEEECCch
Confidence 799999999774
No 289
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=97.33 E-value=0.00038 Score=65.04 Aligned_cols=34 Identities=21% Similarity=0.572 Sum_probs=28.9
Q ss_pred CceEEEEc-CChhHHHHHHHHHHcCCCCeEEEEeCC
Q 017997 1 MVKICCIG-AGYVGGPTMAVIALKCPSIEVAVVDIS 35 (362)
Q Consensus 1 ~mkI~VIG-lG~~G~~lA~~la~~~~G~~V~~~d~~ 35 (362)
||||+|+| .|++|..+...|.++ |.+++..+..+
T Consensus 4 M~kv~IvGatG~vG~~l~~~L~~~-p~~el~~l~s~ 38 (337)
T 3dr3_A 4 MLNTLIVGASGYAGAELVTYVNRH-PHMNITALTVS 38 (337)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHC-TTEEEEEEEEE
T ss_pred ceEEEEECCCChHHHHHHHHHHhC-CCCcEEEEEec
Confidence 68999999 599999999999886 57888887654
No 290
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=97.33 E-value=0.0021 Score=62.52 Aligned_cols=113 Identities=12% Similarity=0.110 Sum_probs=68.7
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHH----HHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhc
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVS----RINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS 77 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~----~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~ 77 (362)
+||.|||+|..|.+.|..|.+. |++|+++|.++. ..+.|.+...+ +..-.+.++.+.
T Consensus 10 k~v~viG~G~sG~s~A~~l~~~--G~~V~~~D~~~~~~~~~~~~L~~~gi~-----------------~~~g~~~~~~~~ 70 (451)
T 3lk7_A 10 KKVLVLGLARSGEAAARLLAKL--GAIVTVNDGKPFDENPTAQSLLEEGIK-----------------VVCGSHPLELLD 70 (451)
T ss_dssp CEEEEECCTTTHHHHHHHHHHT--TCEEEEEESSCGGGCHHHHHHHHTTCE-----------------EEESCCCGGGGG
T ss_pred CEEEEEeeCHHHHHHHHHHHhC--CCEEEEEeCCcccCChHHHHHHhCCCE-----------------EEECCChHHhhc
Confidence 4899999999999999999999 999999998542 33344432111 222223333346
Q ss_pred C-CcEEEEeccCCCCCCCCCCCCCCChHHHHHHHH---------HHHhhcCCCCEEEEeeCCccccHHH-HHHHHHhc
Q 017997 78 E-ADIVFVSVNTPTKTQGLGAGKAADLTYWESAAR---------VIADVSKSDKIVVEKSTVPVKTAEA-IEKILTHN 144 (362)
Q Consensus 78 ~-aDvVii~vptp~~~~g~~~~~~~d~~~l~~~~~---------~i~~~l~~~~iVv~~STv~~gt~~~-l~~~l~~~ 144 (362)
+ +|+||++..-|.+ .| .+..+.+ ++...+.+..+|-++.|..-.||.. +..+|.+.
T Consensus 71 ~~~d~vv~spgi~~~--------~p---~~~~a~~~gi~v~~~~e~~~~~~~~~~IaVTGTnGKTTTt~ml~~iL~~~ 137 (451)
T 3lk7_A 71 EDFCYMIKNPGIPYN--------NP---MVKKALEKQIPVLTEVELAYLVSESQLIGITGSNGKTTTTTMIAEVLNAG 137 (451)
T ss_dssp SCEEEEEECTTSCTT--------SH---HHHHHHHTTCCEECHHHHHHHHCCSEEEEEECSSCHHHHHHHHHHHHHHT
T ss_pred CCCCEEEECCcCCCC--------Ch---hHHHHHHCCCcEEeHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHhc
Confidence 6 8999988544432 12 2333222 1222233457787777776566554 56667654
No 291
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=97.30 E-value=0.00038 Score=67.78 Aligned_cols=88 Identities=22% Similarity=0.130 Sum_probs=64.3
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcE
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (362)
+++.|+|+|.+|..+|..|+.. |.+|+++|+++.+.+..... + .. ..+.++++..+|+
T Consensus 266 KtVvVtGaGgIG~aiA~~Laa~--GA~Viv~D~~~~~a~~Aa~~------------------g-~d-v~~lee~~~~aDv 323 (488)
T 3ond_A 266 KVAVVAGYGDVGKGCAAALKQA--GARVIVTEIDPICALQATME------------------G-LQ-VLTLEDVVSEADI 323 (488)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHT------------------T-CE-ECCGGGTTTTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHh------------------C-Cc-cCCHHHHHHhcCE
Confidence 4789999999999999999999 99999999999877654431 1 22 2456677889999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeC
Q 017997 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKST 128 (362)
Q Consensus 82 Vii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~ST 128 (362)
++.+.+++.- .+ ....+.++++.+|++.+-
T Consensus 324 Vi~atG~~~v---------l~--------~e~l~~mk~gaiVvNaG~ 353 (488)
T 3ond_A 324 FVTTTGNKDI---------IM--------LDHMKKMKNNAIVCNIGH 353 (488)
T ss_dssp EEECSSCSCS---------BC--------HHHHTTSCTTEEEEESSS
T ss_pred EEeCCCChhh---------hh--------HHHHHhcCCCeEEEEcCC
Confidence 9998664321 11 123456788888887553
No 292
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=97.29 E-value=0.00033 Score=65.46 Aligned_cols=72 Identities=10% Similarity=0.053 Sum_probs=46.8
Q ss_pred CceEEEEcCChhHHHHHHHHHHcCCCCeEEE-EeCCH-HHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhc-
Q 017997 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAV-VDISV-SRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS- 77 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~la~~~~G~~V~~-~d~~~-~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~- 77 (362)
|+||+|||+|.+|...+..| . ++.+|++ +|+++ ++.+++.+. .++. .-.....+|+++.++
T Consensus 2 ~~rvgiiG~G~~~~~~~~~l-~--~~~~lvav~d~~~~~~~~~~~~~------------~~~~-~~~~~~~~~~~~ll~~ 65 (337)
T 3ip3_A 2 SLKICVIGSSGHFRYALEGL-D--EECSITGIAPGVPEEDLSKLEKA------------ISEM-NIKPKKYNNWWEMLEK 65 (337)
T ss_dssp CEEEEEECSSSCHHHHHTTC-C--TTEEEEEEECSSTTCCCHHHHHH------------HHTT-TCCCEECSSHHHHHHH
T ss_pred ceEEEEEccchhHHHHHHhc-C--CCcEEEEEecCCchhhHHHHHHH------------HHHc-CCCCcccCCHHHHhcC
Confidence 36999999999988777666 3 3788775 68876 343333220 0000 001356788888775
Q ss_pred -CCcEEEEeccC
Q 017997 78 -EADIVFVSVNT 88 (362)
Q Consensus 78 -~aDvVii~vpt 88 (362)
+.|+|+||+|+
T Consensus 66 ~~vD~V~I~tp~ 77 (337)
T 3ip3_A 66 EKPDILVINTVF 77 (337)
T ss_dssp HCCSEEEECSSH
T ss_pred CCCCEEEEeCCc
Confidence 58999999774
No 293
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=97.27 E-value=0.00012 Score=64.03 Aligned_cols=67 Identities=19% Similarity=0.357 Sum_probs=44.0
Q ss_pred ceEEEEcCChhHHHHHHH--HHHcCCCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcC
Q 017997 2 VKICCIGAGYVGGPTMAV--IALKCPSIEVA-VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSE 78 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~--la~~~~G~~V~-~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~ 78 (362)
++|+|||+|.+|..++.. +... |++++ ++|.|+++......+ -.+...+++++.+++
T Consensus 86 ~rV~IIGAG~~G~~La~~~~~~~~--g~~iVg~~D~dp~k~g~~i~g------------------v~V~~~~dl~eli~~ 145 (215)
T 2vt3_A 86 TDVILIGVGNLGTAFLHYNFTKNN--NTKISMAFDINESKIGTEVGG------------------VPVYNLDDLEQHVKD 145 (215)
T ss_dssp -CEEEECCSHHHHHHHHCC--------CCEEEEEESCTTTTTCEETT------------------EEEEEGGGHHHHCSS
T ss_pred CEEEEEccCHHHHHHHHHHhcccC--CcEEEEEEeCCHHHHHhHhcC------------------CeeechhhHHHHHHh
Confidence 579999999999999994 3333 77766 559998765432221 013345677776766
Q ss_pred CcEEEEeccC
Q 017997 79 ADIVFVSVNT 88 (362)
Q Consensus 79 aDvVii~vpt 88 (362)
.|++++|+|+
T Consensus 146 ~D~ViIAvPs 155 (215)
T 2vt3_A 146 ESVAILTVPA 155 (215)
T ss_dssp CCEEEECSCH
T ss_pred CCEEEEecCc
Confidence 6999999874
No 294
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=97.26 E-value=0.00034 Score=63.43 Aligned_cols=71 Identities=10% Similarity=0.105 Sum_probs=51.9
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhc-CCc
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS-EAD 80 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~-~aD 80 (362)
++|.|+|+|.+|.+++..|++. |++|++++|++++.+.+.+.. .. .+.+.. .++++..+ ++|
T Consensus 120 ~~vlvlGaGg~g~a~a~~L~~~--G~~v~v~~R~~~~a~~l~~~~------------~~--~~~~~~-~~~~~~~~~~~D 182 (272)
T 1p77_A 120 QHVLILGAGGATKGVLLPLLQA--QQNIVLANRTFSKTKELAERF------------QP--YGNIQA-VSMDSIPLQTYD 182 (272)
T ss_dssp CEEEEECCSHHHHTTHHHHHHT--TCEEEEEESSHHHHHHHHHHH------------GG--GSCEEE-EEGGGCCCSCCS
T ss_pred CEEEEECCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHc------------cc--cCCeEE-eeHHHhccCCCC
Confidence 5799999999999999999999 899999999999988776420 00 012322 23344223 899
Q ss_pred EEEEeccCC
Q 017997 81 IVFVSVNTP 89 (362)
Q Consensus 81 vVii~vptp 89 (362)
+||-|+|.+
T Consensus 183 ivIn~t~~~ 191 (272)
T 1p77_A 183 LVINATSAG 191 (272)
T ss_dssp EEEECCCC-
T ss_pred EEEECCCCC
Confidence 999998754
No 295
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=97.20 E-value=0.0015 Score=59.59 Aligned_cols=75 Identities=19% Similarity=0.236 Sum_probs=55.2
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCC-eEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEec--CHHhhhcC
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFST--DVEKHVSE 78 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~-~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~--d~~~a~~~ 78 (362)
.++.|+|+|.+|.+++..|++. |. +|++++|++++.+.+.+.. .. ......+...+ ++.+.+.+
T Consensus 128 k~vlVlGaGG~g~aia~~L~~~--G~~~v~i~~R~~~~a~~la~~~--------~~---~~~~~~i~~~~~~~l~~~l~~ 194 (283)
T 3jyo_A 128 DSVVQVGAGGVGNAVAYALVTH--GVQKLQVADLDTSRAQALADVI--------NN---AVGREAVVGVDARGIEDVIAA 194 (283)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCSEEEEECSSHHHHHHHHHHH--------HH---HHTSCCEEEECSTTHHHHHHH
T ss_pred CEEEEECCcHHHHHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHH--------Hh---hcCCceEEEcCHHHHHHHHhc
Confidence 4789999999999999999998 87 7999999999988775410 00 00011233433 66677889
Q ss_pred CcEEEEeccCC
Q 017997 79 ADIVFVSVNTP 89 (362)
Q Consensus 79 aDvVii~vptp 89 (362)
+|+||-|+|..
T Consensus 195 ~DiVInaTp~G 205 (283)
T 3jyo_A 195 ADGVVNATPMG 205 (283)
T ss_dssp SSEEEECSSTT
T ss_pred CCEEEECCCCC
Confidence 99999997743
No 296
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=97.20 E-value=0.00054 Score=58.39 Aligned_cols=73 Identities=29% Similarity=0.322 Sum_probs=48.4
Q ss_pred ceEEEEcC-ChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCc
Q 017997 2 VKICCIGA-GYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (362)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (362)
|+|.|.|. |++|..++..|++. |++|++++|++++.+.+........ ...+.-.++..++++++|
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~------------~~D~~~~~~~~~~~~~~d 69 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQA--GYEVTVLVRDSSRLPSEGPRPAHVV------------VGDVLQAADVDKTVAGQD 69 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCGGGSCSSSCCCSEEE------------ESCTTSHHHHHHHHTTCS
T ss_pred CEEEEEcCCcHHHHHHHHHHHHC--CCeEEEEEeChhhcccccCCceEEE------------EecCCCHHHHHHHHcCCC
Confidence 68999997 99999999999999 9999999999765432111000000 000100112345577899
Q ss_pred EEEEeccC
Q 017997 81 IVFVSVNT 88 (362)
Q Consensus 81 vVii~vpt 88 (362)
+||-+...
T Consensus 70 ~vi~~a~~ 77 (206)
T 1hdo_A 70 AVIVLLGT 77 (206)
T ss_dssp EEEECCCC
T ss_pred EEEECccC
Confidence 99998764
No 297
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=97.19 E-value=0.00081 Score=60.85 Aligned_cols=100 Identities=13% Similarity=0.108 Sum_probs=65.9
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhh-cCCc
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHV-SEAD 80 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~-~~aD 80 (362)
+++.|+|+|.+|.+++..|++. |.+|++++|++++.+.+.+.... .+.+.. .+.++.. ..+|
T Consensus 120 k~vlViGaGg~g~a~a~~L~~~--G~~V~v~~R~~~~~~~la~~~~~--------------~~~~~~-~~~~~~~~~~~D 182 (271)
T 1nyt_A 120 LRILLIGAGGASRGVLLPLLSL--DCAVTITNRTVSRAEELAKLFAH--------------TGSIQA-LSMDELEGHEFD 182 (271)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSHHHHHHHHHHTGG--------------GSSEEE-CCSGGGTTCCCS
T ss_pred CEEEEECCcHHHHHHHHHHHHc--CCEEEEEECCHHHHHHHHHHhhc--------------cCCeeE-ecHHHhccCCCC
Confidence 4799999999999999999999 89999999999988877542100 012322 2333322 4899
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCcccc
Q 017997 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKT 133 (362)
Q Consensus 81 vVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt 133 (362)
+||-|+|.+...+ .+++. ...++++.+|++.++.|..|
T Consensus 183 ivVn~t~~~~~~~------~~~i~---------~~~l~~~~~v~D~~y~p~~t 220 (271)
T 1nyt_A 183 LIINATSSGISGD------IPAIP---------SSLIHPGIYCYDMFYQKGKT 220 (271)
T ss_dssp EEEECCSCGGGTC------CCCCC---------GGGCCTTCEEEESCCCSSCC
T ss_pred EEEECCCCCCCCC------CCCCC---------HHHcCCCCEEEEeccCCcCC
Confidence 9999987543210 01110 12356778888877775443
No 298
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=97.16 E-value=0.0028 Score=56.37 Aligned_cols=32 Identities=22% Similarity=0.483 Sum_probs=26.0
Q ss_pred ceEEEEcC-ChhHHHHHHHHHHcCCCCeEEE-EeC
Q 017997 2 VKICCIGA-GYVGGPTMAVIALKCPSIEVAV-VDI 34 (362)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~la~~~~G~~V~~-~d~ 34 (362)
|||+|+|+ |.||..++..+.+. +++++++ +|+
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~-~~~elva~~d~ 34 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAA-DDLTLSAELDA 34 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHC-TTCEEEEEECT
T ss_pred CEEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEcc
Confidence 79999996 99999999888754 4788875 454
No 299
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=97.12 E-value=0.00081 Score=61.59 Aligned_cols=64 Identities=13% Similarity=0.242 Sum_probs=43.3
Q ss_pred ceEEEEcCChhHHHHHHHHHHc--CCCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhc-
Q 017997 2 VKICCIGAGYVGGPTMAVIALK--CPSIEVA-VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS- 77 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~--~~G~~V~-~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~- 77 (362)
+||+|||+|.||...+..+... .++.+++ ++|+++ ..+ ...+. .+|+++.++
T Consensus 8 ~rvgiIG~G~iG~~~~~~l~~~~~~~~~~lvav~d~~~-----~a~------------------~~g~~-~~~~~ell~~ 63 (294)
T 1lc0_A 8 FGVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSRRE-----LGS------------------LDEVR-QISLEDALRS 63 (294)
T ss_dssp EEEEEECCSHHHHHHHHHHTSHHHHTTEEEEEEECSSC-----CCE------------------ETTEE-BCCHHHHHHC
T ss_pred ceEEEEEEcHHHHHHHHHHhccccCCCEEEEEEECchH-----HHH------------------HcCCC-CCCHHHHhcC
Confidence 6999999999999998888641 1356665 456642 000 01233 368888775
Q ss_pred -CCcEEEEeccCC
Q 017997 78 -EADIVFVSVNTP 89 (362)
Q Consensus 78 -~aDvVii~vptp 89 (362)
+.|+|++|+|++
T Consensus 64 ~~vD~V~i~tp~~ 76 (294)
T 1lc0_A 64 QEIDVAYICSESS 76 (294)
T ss_dssp SSEEEEEECSCGG
T ss_pred CCCCEEEEeCCcH
Confidence 789999998753
No 300
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=97.12 E-value=0.00084 Score=64.41 Aligned_cols=42 Identities=26% Similarity=0.402 Sum_probs=37.1
Q ss_pred CceEEEEcCChhHHHHHHHHHHcCCC---CeEEEEeCCHHHHHHHHc
Q 017997 1 MVKICCIGAGYVGGPTMAVIALKCPS---IEVAVVDISVSRINAWNS 44 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~la~~~~G---~~V~~~d~~~~~~~~l~~ 44 (362)
|+||.|+|+|++|..++..|++. | .+|+++|+++++.+++.+
T Consensus 1 M~kVlIiGaGgiG~~ia~~L~~~--g~~~~~V~v~~r~~~~~~~la~ 45 (405)
T 4ina_A 1 MAKVLQIGAGGVGGVVAHKMAMN--REVFSHITLASRTLSKCQEIAQ 45 (405)
T ss_dssp -CEEEEECCSHHHHHHHHHHHTC--TTTCCEEEEEESCHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCCceEEEEEECCHHHHHHHHH
Confidence 78999999999999999999988 6 389999999999887654
No 301
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=97.10 E-value=0.0013 Score=63.64 Aligned_cols=66 Identities=26% Similarity=0.330 Sum_probs=47.7
Q ss_pred eEEEEcCChhHHHHHHHHHHc--------CCCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHH
Q 017997 3 KICCIGAGYVGGPTMAVIALK--------CPSIEVA-VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVE 73 (362)
Q Consensus 3 kI~VIGlG~~G~~lA~~la~~--------~~G~~V~-~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~ 73 (362)
||+|||+|.||..++..|.++ +++.+|+ ++|+++++.+.+.. ...+++|++
T Consensus 12 rIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~~~~~~~~~~~--------------------~~~~~~d~~ 71 (444)
T 3mtj_A 12 HVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVRNLDKAEALAG--------------------GLPLTTNPF 71 (444)
T ss_dssp EEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECSCHHHHHHHHT--------------------TCCEESCTH
T ss_pred cEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEECCHHHhhhhcc--------------------cCcccCCHH
Confidence 799999999999988777531 2355555 55899887665421 124567888
Q ss_pred hhhc--CCcEEEEeccC
Q 017997 74 KHVS--EADIVFVSVNT 88 (362)
Q Consensus 74 ~a~~--~aDvVii~vpt 88 (362)
+.++ +.|+|++|+|+
T Consensus 72 ell~d~diDvVve~tp~ 88 (444)
T 3mtj_A 72 DVVDDPEIDIVVELIGG 88 (444)
T ss_dssp HHHTCTTCCEEEECCCS
T ss_pred HHhcCCCCCEEEEcCCC
Confidence 8765 58999999874
No 302
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=97.07 E-value=0.0011 Score=59.02 Aligned_cols=78 Identities=17% Similarity=0.123 Sum_probs=54.8
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCc
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVA-VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~-~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (362)
|+|++||+|.||..++.. . ++++. +|+ ++...+ ...+++|.++.++++|
T Consensus 13 ~rV~i~G~GaIG~~v~~~---~--~leLv~v~~---~k~gel----------------------gv~a~~d~d~lla~pD 62 (253)
T 1j5p_A 13 MTVLIIGMGNIGKKLVEL---G--NFEKIYAYD---RISKDI----------------------PGVVRLDEFQVPSDVS 62 (253)
T ss_dssp CEEEEECCSHHHHHHHHH---S--CCSEEEEEC---SSCCCC----------------------SSSEECSSCCCCTTCC
T ss_pred ceEEEECcCHHHHHHHhc---C--CcEEEEEEe---cccccc----------------------CceeeCCHHHHhhCCC
Confidence 899999999999998887 3 67764 455 221100 1346778887778999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHH-HHHhhcCCCCEEEEeeC
Q 017997 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAAR-VIADVSKSDKIVVEKST 128 (362)
Q Consensus 81 vVii~vptp~~~~g~~~~~~~d~~~l~~~~~-~i~~~l~~~~iVv~~ST 128 (362)
+|+.|-+ .++++ .+.+.|+.|.-|+..|.
T Consensus 63 ~VVe~A~-------------------~~av~e~~~~iL~aG~dvv~~S~ 92 (253)
T 1j5p_A 63 TVVECAS-------------------PEAVKEYSLQILKNPVNYIIIST 92 (253)
T ss_dssp EEEECSC-------------------HHHHHHHHHHHTTSSSEEEECCG
T ss_pred EEEECCC-------------------HHHHHHHHHHHHHCCCCEEEcCh
Confidence 9999953 12333 46777888888877665
No 303
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=97.07 E-value=0.0031 Score=57.09 Aligned_cols=99 Identities=17% Similarity=0.115 Sum_probs=64.8
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCC-eEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhh-cCC
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHV-SEA 79 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~-~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~-~~a 79 (362)
.++.|+|+|.+|.+++..|++. |. +|++++|++++.+++.+... ...+.+. ++++.- .++
T Consensus 121 k~~lvlGaGg~~~aia~~L~~~--G~~~v~i~~R~~~~a~~la~~~~---------------~~~~~~~-~~~~l~~~~~ 182 (272)
T 3pwz_A 121 RRVLLLGAGGAVRGALLPFLQA--GPSELVIANRDMAKALALRNELD---------------HSRLRIS-RYEALEGQSF 182 (272)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--CCSEEEEECSCHHHHHHHHHHHC---------------CTTEEEE-CSGGGTTCCC
T ss_pred CEEEEECccHHHHHHHHHHHHc--CCCEEEEEeCCHHHHHHHHHHhc---------------cCCeeEe-eHHHhcccCC
Confidence 4799999999999999999998 85 99999999999888765210 0113322 222211 689
Q ss_pred cEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCcccc
Q 017997 80 DIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKT 133 (362)
Q Consensus 80 DvVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt 133 (362)
|+||-|+|.....+ .+.+. ...++++.+|++....|..|
T Consensus 183 DivInaTp~gm~~~------~~~i~---------~~~l~~~~~V~DlvY~P~~T 221 (272)
T 3pwz_A 183 DIVVNATSASLTAD------LPPLP---------ADVLGEAALAYELAYGKGLT 221 (272)
T ss_dssp SEEEECSSGGGGTC------CCCCC---------GGGGTTCSEEEESSCSCCSC
T ss_pred CEEEECCCCCCCCC------CCCCC---------HHHhCcCCEEEEeecCCCCC
Confidence 99999977543210 11111 12456788888766555443
No 304
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=97.05 E-value=0.0022 Score=57.65 Aligned_cols=54 Identities=20% Similarity=0.344 Sum_probs=44.9
Q ss_pred ceEEEEcCC-hhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCc
Q 017997 2 VKICCIGAG-YVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (362)
Q Consensus 2 mkI~VIGlG-~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (362)
.++.|||.| .+|.++|..|... |.+|+++++. |.++++.+++||
T Consensus 151 k~vvVvG~s~iVG~plA~lL~~~--gAtVtv~~~~---------------------------------t~~L~~~~~~AD 195 (276)
T 3ngx_A 151 NTVTIVNRSPVVGRPLSMMLLNR--NYTVSVCHSK---------------------------------TKDIGSMTRSSK 195 (276)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHT--TCEEEEECTT---------------------------------CSCHHHHHHHSS
T ss_pred CEEEEEcCChHHHHHHHHHHHHC--CCeEEEEeCC---------------------------------cccHHHhhccCC
Confidence 479999987 4899999999999 8999999752 235566789999
Q ss_pred EEEEeccCCC
Q 017997 81 IVFVSVNTPT 90 (362)
Q Consensus 81 vVii~vptp~ 90 (362)
+||.+++.|.
T Consensus 196 IVI~Avg~p~ 205 (276)
T 3ngx_A 196 IVVVAVGRPG 205 (276)
T ss_dssp EEEECSSCTT
T ss_pred EEEECCCCCc
Confidence 9999998763
No 305
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=97.04 E-value=0.0012 Score=61.70 Aligned_cols=85 Identities=15% Similarity=0.154 Sum_probs=49.8
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEE-eCCHHHHHHHHc-CCCCCCCCC-hHHHHhhhcCCCEEEecCHHhhhcC
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVV-DISVSRINAWNS-DQLPIYEPG-LDGVVKQCRGKNLFFSTDVEKHVSE 78 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~-d~~~~~~~~l~~-~~~~~~e~~-l~~~~~~~~~~~l~~t~d~~~a~~~ 78 (362)
+||+|+|+|.+|..++..|..+ ++++|+++ |.+++....+.+ .....+..- ....+.....+.+....+..+...+
T Consensus 3 ikVgI~G~G~IGr~v~r~l~~~-~~~evvaV~d~~~~~~~~l~~~dg~s~~g~~~~~~~v~~~~~~~l~v~~~~~~~~~~ 81 (343)
T 2yyy_A 3 AKVLINGYGSIGKRVADAVSMQ-DDMEVIGVTKTKPDFEARLAVEKGYKLFVAIPDNERVKLFEDAGIPVEGTILDIIED 81 (343)
T ss_dssp EEEEEECCSHHHHHHHHHHHHS-SSEEEEEEEESSCSHHHHHHHHTTCCEEESSCCHHHHHHHHHTTCCCCCBGGGTGGG
T ss_pred eEEEEECCCHHHHHHHHHHHhC-CCceEEEEecCCHHHHHHHHHhcCCccccccCCCceeecccCCeEEECCchHHhccC
Confidence 5999999999999999998876 36787655 666555544432 101111110 0111100011234444455555679
Q ss_pred CcEEEEecc
Q 017997 79 ADIVFVSVN 87 (362)
Q Consensus 79 aDvVii~vp 87 (362)
+|+||.|+|
T Consensus 82 vDiV~eatg 90 (343)
T 2yyy_A 82 ADIVVDGAP 90 (343)
T ss_dssp CSEEEECCC
T ss_pred CCEEEECCC
Confidence 999999966
No 306
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=97.03 E-value=0.004 Score=58.06 Aligned_cols=42 Identities=14% Similarity=0.174 Sum_probs=33.4
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEE-eC--CHHHHHHHHc
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVV-DI--SVSRINAWNS 44 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~-d~--~~~~~~~l~~ 44 (362)
+||+|+|.|++|..+++.|.++ |+.+|+++ |+ +++.+..+.+
T Consensus 4 ikVgI~G~G~iGr~~~R~l~~~-~~vevvaI~d~~~~~~~~a~l~~ 48 (335)
T 1u8f_O 4 VKVGVNGFGRIGRLVTRAAFNS-GKVDIVAINDPFIDLNYMVYMFQ 48 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-CSSEEEEEECSSSCHHHHHHHHH
T ss_pred eEEEEEccCHHHHHHHHHHHcC-CCcEEEEecCCCCCHHHHHHHhh
Confidence 4999999999999999998876 47887766 53 7777766553
No 307
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=96.98 E-value=0.0014 Score=60.08 Aligned_cols=70 Identities=20% Similarity=0.264 Sum_probs=48.4
Q ss_pred CceEEEEc-CChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCC
Q 017997 1 MVKICCIG-AGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEA 79 (362)
Q Consensus 1 ~mkI~VIG-lG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~a 79 (362)
+|+|.|.| .|++|..++..|++. |++|++++|++...+ +. + ..+ ..+.+. ..+..++++++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~-~~-~-~~~------------~~~Dl~-~~~~~~~~~~~ 63 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKND--GNTPIILTRSIGNKA-IN-D-YEY------------RVSDYT-LEDLINQLNDV 63 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCCC-------C-CEE------------EECCCC-HHHHHHHTTTC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhC--CCEEEEEeCCCCccc-CC-c-eEE------------EEcccc-HHHHHHhhcCC
Confidence 37999999 699999999999999 999999999844433 32 1 110 012233 34456678899
Q ss_pred cEEEEeccC
Q 017997 80 DIVFVSVNT 88 (362)
Q Consensus 80 DvVii~vpt 88 (362)
|+||-|...
T Consensus 64 d~Vih~a~~ 72 (311)
T 3m2p_A 64 DAVVHLAAT 72 (311)
T ss_dssp SEEEECCCC
T ss_pred CEEEEcccc
Confidence 999998753
No 308
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=96.98 E-value=0.0012 Score=58.94 Aligned_cols=33 Identities=15% Similarity=0.377 Sum_probs=30.5
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCC-eEEEEeCCH
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISV 36 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~-~V~~~d~~~ 36 (362)
.+|.|||+|.+|..+|..|+.. |. +++++|.+.
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~--Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASA--GVGNLTLLDFDT 65 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCSEEEEECCCB
T ss_pred CeEEEEeeCHHHHHHHHHHHHc--CCCeEEEEcCCC
Confidence 4899999999999999999999 76 899999987
No 309
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=96.96 E-value=0.00083 Score=60.76 Aligned_cols=74 Identities=11% Similarity=0.085 Sum_probs=50.4
Q ss_pred ceEEEEc-CChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCc
Q 017997 2 VKICCIG-AGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (362)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (362)
|||.|.| .|++|..++..|++. +|++|++++|++++.+.+......+.. +.+.-.+++.++++++|
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~-~g~~V~~~~R~~~~~~~~~~~~v~~~~------------~D~~d~~~l~~~~~~~d 67 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIAN-HIDHFHIGVRNVEKVPDDWRGKVSVRQ------------LDYFNQESMVEAFKGMD 67 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHT-TCTTEEEEESSGGGSCGGGBTTBEEEE------------CCTTCHHHHHHHTTTCS
T ss_pred CEEEEEcCCchHHHHHHHHHhhC-CCCcEEEEECCHHHHHHhhhCCCEEEE------------cCCCCHHHHHHHHhCCC
Confidence 7999999 599999999999875 279999999998776544332111100 11111123455678999
Q ss_pred EEEEeccC
Q 017997 81 IVFVSVNT 88 (362)
Q Consensus 81 vVii~vpt 88 (362)
+||.+.+.
T Consensus 68 ~vi~~a~~ 75 (289)
T 3e48_A 68 TVVFIPSI 75 (289)
T ss_dssp EEEECCCC
T ss_pred EEEEeCCC
Confidence 99998753
No 310
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=96.94 E-value=0.0021 Score=59.72 Aligned_cols=117 Identities=20% Similarity=0.216 Sum_probs=66.1
Q ss_pred CceEEEEcCChhHHHHHHHHHHc-------CCCCeEEEE-eCCHHHHHHHHcCCCCCCCCChHHHHhh-hcCCCEEEe--
Q 017997 1 MVKICCIGAGYVGGPTMAVIALK-------CPSIEVAVV-DISVSRINAWNSDQLPIYEPGLDGVVKQ-CRGKNLFFS-- 69 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~la~~-------~~G~~V~~~-d~~~~~~~~l~~~~~~~~e~~l~~~~~~-~~~~~l~~t-- 69 (362)
|+||+|||+|.||..++..|.+. +++.+|+++ |+++++.+. ..+.+.+.. .... .++
T Consensus 2 mirvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~----------id~~~~~~~~~~~~--~~~~~ 69 (327)
T 3do5_A 2 MIKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSISGD----------FSLVEALRMKRETG--MLRDD 69 (327)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSSCEEESS----------CCHHHHHHHHHHHS--SCSBC
T ss_pred cEEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCChHhccc----------cCHHHHHhhhccCc--cccCC
Confidence 78999999999999999998764 136676655 666433211 001111100 0001 122
Q ss_pred cCHHhhhc--CCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccc-cHHHHHHHHHh
Q 017997 70 TDVEKHVS--EADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVK-TAEAIEKILTH 143 (362)
Q Consensus 70 ~d~~~a~~--~aDvVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~g-t~~~l~~~l~~ 143 (362)
.|+++.++ +.|+|++|+|+.... .. +.+.+...+..+.-|+..++-|.. ..+++.+..++
T Consensus 70 ~d~~~ll~~~~iDvVv~~tp~~~h~-------------~~-a~~~~~~aL~aGkhVv~~NKkpla~~~~eL~~~A~~ 132 (327)
T 3do5_A 70 AKAIEVVRSADYDVLIEASVTRVDG-------------GE-GVNYIREALKRGKHVVTSNKGPLVAEFHGLMSLAER 132 (327)
T ss_dssp CCHHHHHHHSCCSEEEECCCCC-----------------C-HHHHHHHHHTTTCEEEECCSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHhcCCCCCEEEECCCCcccc-------------hh-HHHHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHh
Confidence 37777664 689999998754211 12 344555667788888876554433 22345444444
No 311
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=96.90 E-value=0.0043 Score=56.50 Aligned_cols=72 Identities=18% Similarity=0.358 Sum_probs=55.3
Q ss_pred ceEEEEcCCh-hHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCc
Q 017997 2 VKICCIGAGY-VGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (362)
Q Consensus 2 mkI~VIGlG~-~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (362)
.++.|||.|. +|.++|..|... |.+|+++++. +.++.+.+++||
T Consensus 166 k~vvVIG~s~iVG~p~A~lL~~~--gAtVtv~hs~---------------------------------t~~L~~~~~~AD 210 (301)
T 1a4i_A 166 RHAVVVGRSKIVGAPMHDLLLWN--NATVTTCHSK---------------------------------TAHLDEEVNKGD 210 (301)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHT--TCEEEEECTT---------------------------------CSSHHHHHTTCS
T ss_pred CEEEEECCCchHHHHHHHHHHhC--CCeEEEEECC---------------------------------cccHHHHhccCC
Confidence 4799999995 899999999998 8999999742 235666789999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeC
Q 017997 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKST 128 (362)
Q Consensus 81 vVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~ST 128 (362)
+||.+++.|.-. . ...++++.+||+-+.
T Consensus 211 IVI~Avg~p~~I--------------~------~~~vk~GavVIDVgi 238 (301)
T 1a4i_A 211 ILVVATGQPEMV--------------K------GEWIKPGAIVIDCGI 238 (301)
T ss_dssp EEEECCCCTTCB--------------C------GGGSCTTCEEEECCC
T ss_pred EEEECCCCcccC--------------C------HHHcCCCcEEEEccC
Confidence 999999876321 0 123578999987443
No 312
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=96.83 E-value=0.0037 Score=56.94 Aligned_cols=71 Identities=23% Similarity=0.358 Sum_probs=53.6
Q ss_pred ceEEEEcCCh-hHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHH--hhhcC
Q 017997 2 VKICCIGAGY-VGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVE--KHVSE 78 (362)
Q Consensus 2 mkI~VIGlG~-~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~--~a~~~ 78 (362)
.++.|||.|. +|.++|..|... |.+|+++++... +++ +.+++
T Consensus 166 k~vvVIG~s~iVG~p~A~lL~~~--gAtVtv~~~~T~---------------------------------~l~l~~~~~~ 210 (300)
T 4a26_A 166 KRAVVLGRSNIVGAPVAALLMKE--NATVTIVHSGTS---------------------------------TEDMIDYLRT 210 (300)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHT--TCEEEEECTTSC---------------------------------HHHHHHHHHT
T ss_pred CEEEEECCCchHHHHHHHHHHHC--CCeEEEEeCCCC---------------------------------Cchhhhhhcc
Confidence 4799999876 899999999999 899999986311 233 56889
Q ss_pred CcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEee
Q 017997 79 ADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKS 127 (362)
Q Consensus 79 aDvVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~S 127 (362)
||+||.+++.|.-. . ...++++.+||+.+
T Consensus 211 ADIVI~Avg~p~~I---------~-----------~~~vk~GavVIDvg 239 (300)
T 4a26_A 211 ADIVIAAMGQPGYV---------K-----------GEWIKEGAAVVDVG 239 (300)
T ss_dssp CSEEEECSCCTTCB---------C-----------GGGSCTTCEEEECC
T ss_pred CCEEEECCCCCCCC---------c-----------HHhcCCCcEEEEEe
Confidence 99999999876321 1 13468899988743
No 313
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=96.83 E-value=0.0065 Score=59.76 Aligned_cols=112 Identities=18% Similarity=0.215 Sum_probs=68.9
Q ss_pred ceEEEEcCChhHHH-HHHHHHHcCCCCeEEEEeCCHH-HHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCC
Q 017997 2 VKICCIGAGYVGGP-TMAVIALKCPSIEVAVVDISVS-RINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEA 79 (362)
Q Consensus 2 mkI~VIGlG~~G~~-lA~~la~~~~G~~V~~~d~~~~-~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~a 79 (362)
++|.|||+|..|.+ +|..|.+. |++|+++|..+. ..+.|++...+ +..-.+.+. +.++
T Consensus 23 ~~v~viGiG~sG~s~~A~~l~~~--G~~V~~~D~~~~~~~~~l~~~gi~-----------------~~~g~~~~~-~~~~ 82 (494)
T 4hv4_A 23 RHIHFVGIGGAGMGGIAEVLANE--GYQISGSDLAPNSVTQHLTALGAQ-----------------IYFHHRPEN-VLDA 82 (494)
T ss_dssp CEEEEETTTSTTHHHHHHHHHHT--TCEEEEECSSCCHHHHHHHHTTCE-----------------EESSCCGGG-GTTC
T ss_pred CEEEEEEEcHhhHHHHHHHHHhC--CCeEEEEECCCCHHHHHHHHCCCE-----------------EECCCCHHH-cCCC
Confidence 58999999999996 89999999 999999997642 33444432221 111123333 6789
Q ss_pred cEEEEeccCCCCCCCCCCCCCCChHHHHHHH----------HHHHhhcCCCCEEEEeeCCccccHHH-HHHHHHhc
Q 017997 80 DIVFVSVNTPTKTQGLGAGKAADLTYWESAA----------RVIADVSKSDKIVVEKSTVPVKTAEA-IEKILTHN 144 (362)
Q Consensus 80 DvVii~vptp~~~~g~~~~~~~d~~~l~~~~----------~~i~~~l~~~~iVv~~STv~~gt~~~-l~~~l~~~ 144 (362)
|+||++-.-|.+ .| .+..+. +-+...++...+|-++.|..=.||.. +..+|.+.
T Consensus 83 d~vV~Spgi~~~--------~p---~~~~a~~~gi~v~~~~e~l~~~~~~~~~IaVTGTnGKTTTt~ml~~iL~~~ 147 (494)
T 4hv4_A 83 SVVVVSTAISAD--------NP---EIVAAREARIPVIRRAEMLAELMRYRHGIAVAGTHGKTTTTAMLSSIYAEA 147 (494)
T ss_dssp SEEEECTTSCTT--------CH---HHHHHHHTTCCEEEHHHHHHHHHTTSEEEEEECSSSHHHHHHHHHHHHHHT
T ss_pred CEEEECCCCCCC--------CH---HHHHHHHCCCCEEcHHHHHHHHhcCCCEEEEecCCChHHHHHHHHHHHHhc
Confidence 999987433321 12 223222 22334444455777777776666654 56777664
No 314
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=96.80 E-value=0.002 Score=58.27 Aligned_cols=67 Identities=13% Similarity=0.133 Sum_probs=51.3
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCC-eEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCc
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~-~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (362)
.++.|+|+|.+|.+++..|++. |. +|++++|++++.+.+.+.. + ..+..+.. +.++|
T Consensus 120 ~~vlvlGaGgaarav~~~L~~~--G~~~i~v~nRt~~ka~~la~~~-----------------~-~~~~~~~~--~~~~D 177 (271)
T 1npy_A 120 AKVIVHGSGGMAKAVVAAFKNS--GFEKLKIYARNVKTGQYLAALY-----------------G-YAYINSLE--NQQAD 177 (271)
T ss_dssp SCEEEECSSTTHHHHHHHHHHT--TCCCEEEECSCHHHHHHHHHHH-----------------T-CEEESCCT--TCCCS
T ss_pred CEEEEECCcHHHHHHHHHHHHC--CCCEEEEEeCCHHHHHHHHHHc-----------------C-Cccchhhh--cccCC
Confidence 4799999999999999999998 76 8999999999988876420 0 12222222 46899
Q ss_pred EEEEeccCCC
Q 017997 81 IVFVSVNTPT 90 (362)
Q Consensus 81 vVii~vptp~ 90 (362)
+||-|+|.+.
T Consensus 178 ivInaTp~gm 187 (271)
T 1npy_A 178 ILVNVTSIGM 187 (271)
T ss_dssp EEEECSSTTC
T ss_pred EEEECCCCCc
Confidence 9999988654
No 315
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=96.79 E-value=0.00031 Score=61.17 Aligned_cols=68 Identities=15% Similarity=0.213 Sum_probs=46.1
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEE-EeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhc-CC
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAV-VDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS-EA 79 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~-~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~-~a 79 (362)
++|+|||+|.+|..++..+.... |+++++ +|.|+++......+ . .+...+++++.++ +.
T Consensus 81 ~rV~IIGaG~~G~~la~~~~~~~-g~~iVg~~D~dp~k~g~~i~g-v-----------------~V~~~~dl~ell~~~I 141 (211)
T 2dt5_A 81 WGLCIVGMGRLGSALADYPGFGE-SFELRGFFDVDPEKVGRPVRG-G-----------------VIEHVDLLPQRVPGRI 141 (211)
T ss_dssp EEEEEECCSHHHHHHHHCSCCCS-SEEEEEEEESCTTTTTCEETT-E-----------------EEEEGGGHHHHSTTTC
T ss_pred CEEEEECccHHHHHHHHhHhhcC-CcEEEEEEeCCHHHHhhhhcC-C-----------------eeecHHhHHHHHHcCC
Confidence 58999999999999988643333 676655 59988765432211 0 1233567777554 68
Q ss_pred cEEEEeccC
Q 017997 80 DIVFVSVNT 88 (362)
Q Consensus 80 DvVii~vpt 88 (362)
|.|++|+|+
T Consensus 142 D~ViIA~Ps 150 (211)
T 2dt5_A 142 EIALLTVPR 150 (211)
T ss_dssp CEEEECSCH
T ss_pred CEEEEeCCc
Confidence 999999874
No 316
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=96.79 E-value=0.0063 Score=55.48 Aligned_cols=104 Identities=16% Similarity=0.108 Sum_probs=66.0
Q ss_pred ceEEEEcC-ChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhc--C
Q 017997 2 VKICCIGA-GYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS--E 78 (362)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~--~ 78 (362)
+||+|+|+ |.||..++..+.+. |++ .++.+++.+. +. + ...+.+..+++++.+ .
T Consensus 8 ~~VaVvGasG~~G~~~~~~l~~~--g~~-~v~~VnP~~~-----g~----~-----------i~G~~vy~sl~el~~~~~ 64 (288)
T 1oi7_A 8 TRVLVQGITGREGQFHTKQMLTY--GTK-IVAGVTPGKG-----GM----E-----------VLGVPVYDTVKEAVAHHE 64 (288)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH--TCE-EEEEECTTCT-----TC----E-----------ETTEEEESSHHHHHHHSC
T ss_pred CEEEEECCCCCHHHHHHHHHHHc--CCe-EEEEECCCCC-----Cc----e-----------ECCEEeeCCHHHHhhcCC
Confidence 58999998 99999999999888 898 4455555321 10 0 013667778888777 8
Q ss_pred CcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhc
Q 017997 79 ADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHN 144 (362)
Q Consensus 79 aDvVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~ 144 (362)
+|++++++|.+ ...+++++..+. .-..+|+.++.++....+++.+..++.
T Consensus 65 ~Dv~Ii~vp~~---------------~~~~~~~ea~~~-Gi~~vVi~t~G~~~~~~~~l~~~a~~~ 114 (288)
T 1oi7_A 65 VDASIIFVPAP---------------AAADAALEAAHA-GIPLIVLITEGIPTLDMVRAVEEIKAL 114 (288)
T ss_dssp CSEEEECCCHH---------------HHHHHHHHHHHT-TCSEEEECCSCCCHHHHHHHHHHHHHH
T ss_pred CCEEEEecCHH---------------HHHHHHHHHHHC-CCCEEEEECCCCCHHHHHHHHHHHHHc
Confidence 99999998732 334555555443 223355544445543344566555554
No 317
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=96.77 E-value=0.0039 Score=56.60 Aligned_cols=33 Identities=18% Similarity=0.407 Sum_probs=30.9
Q ss_pred ceEEEEcC-ChhHHHHHHHHHHcCCCCeEEEEeCCH
Q 017997 2 VKICCIGA-GYVGGPTMAVIALKCPSIEVAVVDISV 36 (362)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~la~~~~G~~V~~~d~~~ 36 (362)
|||.|.|+ |++|..++..|.++ ||+|+++.|++
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~--G~~V~~l~R~~ 34 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNAR--GHEVTLVSRKP 34 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSC
T ss_pred CEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCC
Confidence 89999997 99999999999999 99999999864
No 318
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=96.75 E-value=0.0048 Score=55.83 Aligned_cols=53 Identities=28% Similarity=0.474 Sum_probs=44.6
Q ss_pred ceEEEEcCCh-hHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCc
Q 017997 2 VKICCIGAGY-VGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (362)
Q Consensus 2 mkI~VIGlG~-~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (362)
.++.|||.|. +|.++|..|... |.+|+++++. +.++.+.+++||
T Consensus 160 k~vvVIG~s~iVG~p~A~lL~~~--gAtVtv~hs~---------------------------------t~~L~~~~~~AD 204 (288)
T 1b0a_A 160 LNAVVIGASNIVGRPMSMELLLA--GCTTTVTHRF---------------------------------TKNLRHHVENAD 204 (288)
T ss_dssp CEEEEECCCTTTHHHHHHHHHTT--TCEEEEECSS---------------------------------CSCHHHHHHHCS
T ss_pred CEEEEECCChHHHHHHHHHHHHC--CCeEEEEeCC---------------------------------chhHHHHhccCC
Confidence 4799999996 799999999998 8999999743 235566789999
Q ss_pred EEEEeccCC
Q 017997 81 IVFVSVNTP 89 (362)
Q Consensus 81 vVii~vptp 89 (362)
+||.+++.|
T Consensus 205 IVI~Avg~p 213 (288)
T 1b0a_A 205 LLIVAVGKP 213 (288)
T ss_dssp EEEECSCCT
T ss_pred EEEECCCCc
Confidence 999999976
No 319
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=96.71 E-value=0.0014 Score=59.12 Aligned_cols=74 Identities=14% Similarity=0.251 Sum_probs=49.9
Q ss_pred ceEEEEcC-ChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCc
Q 017997 2 VKICCIGA-GYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (362)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (362)
|+|.|.|. |++|..++..|++..+|++|+++++++++.+.+......+.. +.+.-..+..++++++|
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~~~~~~~------------~D~~d~~~l~~~~~~~d 68 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRH------------GDYNQPESLQKAFAGVS 68 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHTTCEEEE------------CCTTCHHHHHHHTTTCS
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhcCCeEEE------------eccCCHHHHHHHHhcCC
Confidence 68999996 999999999998753479999999988766655432111100 11111122445678899
Q ss_pred EEEEecc
Q 017997 81 IVFVSVN 87 (362)
Q Consensus 81 vVii~vp 87 (362)
+||-+..
T Consensus 69 ~vi~~a~ 75 (287)
T 2jl1_A 69 KLLFISG 75 (287)
T ss_dssp EEEECCC
T ss_pred EEEEcCC
Confidence 9998865
No 320
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=96.71 E-value=0.003 Score=57.37 Aligned_cols=66 Identities=9% Similarity=0.154 Sum_probs=50.8
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCC-eEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCc
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~-~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (362)
.++.|+|+|.+|.+++..|++. |. +|++++|++++.+++.+.. . ....++..+ + ++|
T Consensus 123 k~vlvlGaGGaaraia~~L~~~--G~~~v~v~nRt~~ka~~La~~~-----------------~-~~~~~~l~~-l-~~D 180 (282)
T 3fbt_A 123 NICVVLGSGGAARAVLQYLKDN--FAKDIYVVTRNPEKTSEIYGEF-----------------K-VISYDELSN-L-KGD 180 (282)
T ss_dssp SEEEEECSSTTHHHHHHHHHHT--TCSEEEEEESCHHHHHHHCTTS-----------------E-EEEHHHHTT-C-CCS
T ss_pred CEEEEECCcHHHHHHHHHHHHc--CCCEEEEEeCCHHHHHHHHHhc-----------------C-cccHHHHHh-c-cCC
Confidence 4799999999999999999998 87 9999999999998886531 0 111123333 4 899
Q ss_pred EEEEeccCC
Q 017997 81 IVFVSVNTP 89 (362)
Q Consensus 81 vVii~vptp 89 (362)
+||-|+|..
T Consensus 181 ivInaTp~G 189 (282)
T 3fbt_A 181 VIINCTPKG 189 (282)
T ss_dssp EEEECSSTT
T ss_pred EEEECCccC
Confidence 999997753
No 321
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=96.70 E-value=0.0069 Score=54.76 Aligned_cols=53 Identities=25% Similarity=0.371 Sum_probs=44.3
Q ss_pred ceEEEEcCCh-hHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCc
Q 017997 2 VKICCIGAGY-VGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (362)
Q Consensus 2 mkI~VIGlG~-~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (362)
.++.|||.|. +|.++|..|+.. |.+|+.+++. |.++++.+++||
T Consensus 161 k~vvVvGrs~iVG~p~A~lL~~~--gAtVtv~h~~---------------------------------t~~L~~~~~~AD 205 (285)
T 3p2o_A 161 KDAVIIGASNIVGRPMATMLLNA--GATVSVCHIK---------------------------------TKDLSLYTRQAD 205 (285)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHT--TCEEEEECTT---------------------------------CSCHHHHHTTCS
T ss_pred CEEEEECCCchHHHHHHHHHHHC--CCeEEEEeCC---------------------------------chhHHHHhhcCC
Confidence 4799999876 799999999998 8999998752 134566789999
Q ss_pred EEEEeccCC
Q 017997 81 IVFVSVNTP 89 (362)
Q Consensus 81 vVii~vptp 89 (362)
+||.+++.|
T Consensus 206 IVI~Avg~p 214 (285)
T 3p2o_A 206 LIIVAAGCV 214 (285)
T ss_dssp EEEECSSCT
T ss_pred EEEECCCCC
Confidence 999999866
No 322
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=96.68 E-value=0.002 Score=60.61 Aligned_cols=32 Identities=25% Similarity=0.490 Sum_probs=26.8
Q ss_pred ceEEEEc-CChhHHHHHHHHHHcCCCCeEEEEeC
Q 017997 2 VKICCIG-AGYVGGPTMAVIALKCPSIEVAVVDI 34 (362)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~la~~~~G~~V~~~d~ 34 (362)
|||+|+| .|++|..++..|.++ |.++|+.+..
T Consensus 9 ~kV~IiGAtG~iG~~llr~L~~~-p~~ev~~i~~ 41 (354)
T 1ys4_A 9 IKVGVLGATGSVGQRFVQLLADH-PMFELTALAA 41 (354)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTC-SSEEEEEEEE
T ss_pred ceEEEECcCCHHHHHHHHHHhcC-CCCEEEEEEc
Confidence 6999999 899999999998876 4678887743
No 323
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=96.66 E-value=0.0085 Score=54.17 Aligned_cols=53 Identities=28% Similarity=0.454 Sum_probs=44.1
Q ss_pred ceEEEEcCCh-hHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCc
Q 017997 2 VKICCIGAGY-VGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (362)
Q Consensus 2 mkI~VIGlG~-~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (362)
.++.|||.|. +|.++|..|... |.+|++.++. |.++++.+++||
T Consensus 162 k~vvVIG~s~iVG~p~A~lL~~~--gAtVtv~hs~---------------------------------t~~L~~~~~~AD 206 (285)
T 3l07_A 162 AYAVVVGASNVVGKPVSQLLLNA--KATVTTCHRF---------------------------------TTDLKSHTTKAD 206 (285)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHT--TCEEEEECTT---------------------------------CSSHHHHHTTCS
T ss_pred CEEEEECCCchhHHHHHHHHHHC--CCeEEEEeCC---------------------------------chhHHHhcccCC
Confidence 4799999877 799999999998 8999998642 235566789999
Q ss_pred EEEEeccCC
Q 017997 81 IVFVSVNTP 89 (362)
Q Consensus 81 vVii~vptp 89 (362)
+||.+++.|
T Consensus 207 IVI~Avg~p 215 (285)
T 3l07_A 207 ILIVAVGKP 215 (285)
T ss_dssp EEEECCCCT
T ss_pred EEEECCCCC
Confidence 999999866
No 324
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=96.66 E-value=0.013 Score=53.62 Aligned_cols=104 Identities=17% Similarity=0.167 Sum_probs=66.2
Q ss_pred ceEEEEcC-ChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhc--C
Q 017997 2 VKICCIGA-GYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS--E 78 (362)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~--~ 78 (362)
.+|.|+|+ |.+|..++..+.+. |++ .++++|+.+. +. .+ ..+.+..+++++.+ +
T Consensus 14 ~~v~V~Gasg~~G~~~~~~l~~~--g~~-~V~~VnP~~~-----g~-~i--------------~G~~vy~sl~el~~~~~ 70 (294)
T 2yv1_A 14 TKAIVQGITGRQGSFHTKKMLEC--GTK-IVGGVTPGKG-----GQ-NV--------------HGVPVFDTVKEAVKETD 70 (294)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHT--TCC-EEEEECTTCT-----TC-EE--------------TTEEEESSHHHHHHHHC
T ss_pred CEEEEECCCCCHHHHHHHHHHhC--CCe-EEEEeCCCCC-----Cc-eE--------------CCEeeeCCHHHHhhcCC
Confidence 36888898 99999999999987 888 6667665421 00 00 13667788888777 8
Q ss_pred CcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhc
Q 017997 79 ADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHN 144 (362)
Q Consensus 79 aDvVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~ 144 (362)
+|++++++|.+ ...+++++..+. ....+|+.++.++....+++.+..++.
T Consensus 71 ~Dv~ii~vp~~---------------~~~~~v~ea~~~-Gi~~vVi~t~G~~~~~~~~l~~~A~~~ 120 (294)
T 2yv1_A 71 ANASVIFVPAP---------------FAKDAVFEAIDA-GIELIVVITEHIPVHDTMEFVNYAEDV 120 (294)
T ss_dssp CCEEEECCCHH---------------HHHHHHHHHHHT-TCSEEEECCSCCCHHHHHHHHHHHHHH
T ss_pred CCEEEEccCHH---------------HHHHHHHHHHHC-CCCEEEEECCCCCHHHHHHHHHHHHHc
Confidence 99999998742 334555555443 233345544445544344666655554
No 325
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=96.63 E-value=0.0093 Score=53.89 Aligned_cols=70 Identities=29% Similarity=0.420 Sum_probs=53.3
Q ss_pred ceEEEEcCCh-hHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCc
Q 017997 2 VKICCIGAGY-VGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (362)
Q Consensus 2 mkI~VIGlG~-~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (362)
.++.|||.|. +|.++|..|+.. |.+|+.+.+. |.++++.+++||
T Consensus 162 k~vvVvGrs~iVG~plA~lL~~~--gAtVtv~hs~---------------------------------T~~L~~~~~~AD 206 (286)
T 4a5o_A 162 MDAVVVGASNIVGRPMALELLLG--GCTVTVTHRF---------------------------------TRDLADHVSRAD 206 (286)
T ss_dssp CEEEEECTTSTTHHHHHHHHHHT--TCEEEEECTT---------------------------------CSCHHHHHHTCS
T ss_pred CEEEEECCCchhHHHHHHHHHHC--CCeEEEEeCC---------------------------------CcCHHHHhccCC
Confidence 4799999876 899999999998 8999998642 134566789999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEe
Q 017997 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEK 126 (362)
Q Consensus 81 vVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~ 126 (362)
+||.+++.|.-. . ...++++.+|++-
T Consensus 207 IVI~Avg~p~~I---------~-----------~~~vk~GavVIDv 232 (286)
T 4a5o_A 207 LVVVAAGKPGLV---------K-----------GEWIKEGAIVIDV 232 (286)
T ss_dssp EEEECCCCTTCB---------C-----------GGGSCTTCEEEEC
T ss_pred EEEECCCCCCCC---------C-----------HHHcCCCeEEEEe
Confidence 999999866321 0 1345889988863
No 326
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=96.62 E-value=0.0008 Score=60.84 Aligned_cols=36 Identities=22% Similarity=0.208 Sum_probs=33.0
Q ss_pred CceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHH
Q 017997 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSR 38 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~ 38 (362)
||||.|.|+|++|..++..|++. |++|++++++++.
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~--g~~V~~~~r~~~~ 38 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQ--GHEVTGLRRSAQP 38 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT--TCCEEEEECTTSC
T ss_pred CCcEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCccc
Confidence 47999999999999999999999 9999999998654
No 327
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=96.62 E-value=0.0032 Score=58.01 Aligned_cols=40 Identities=18% Similarity=0.238 Sum_probs=35.5
Q ss_pred ceEEEEcC-ChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHH
Q 017997 2 VKICCIGA-GYVGGPTMAVIALKCPSIEVAVVDISVSRINAWN 43 (362)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~ 43 (362)
|+|.|.|. |++|..++..|++. |++|+++++++++.+.+.
T Consensus 12 ~~vlVTGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~ 52 (342)
T 1y1p_A 12 SLVLVTGANGFVASHVVEQLLEH--GYKVRGTARSASKLANLQ 52 (342)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHH
T ss_pred CEEEEECCccHHHHHHHHHHHHC--CCEEEEEeCCcccHHHHH
Confidence 68999997 99999999999999 999999999988766543
No 328
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=96.58 E-value=0.0026 Score=55.84 Aligned_cols=74 Identities=7% Similarity=0.085 Sum_probs=51.0
Q ss_pred CceEEEEc-CChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCC
Q 017997 1 MVKICCIG-AGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEA 79 (362)
Q Consensus 1 ~mkI~VIG-lG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~a 79 (362)
+|+|.|.| .|.+|..++..|++.++|++|++++|++++.+.+..+ ..+.. ..+.-.++..++++++
T Consensus 4 ~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~~~~-~~~~~------------~D~~d~~~~~~~~~~~ 70 (253)
T 1xq6_A 4 LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGE-ADVFI------------GDITDADSINPAFQGI 70 (253)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTCC-TTEEE------------CCTTSHHHHHHHHTTC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhcCCC-eeEEE------------ecCCCHHHHHHHHcCC
Confidence 47899998 6999999999999984469999999999887765221 11100 0111012344557789
Q ss_pred cEEEEecc
Q 017997 80 DIVFVSVN 87 (362)
Q Consensus 80 DvVii~vp 87 (362)
|+||-+..
T Consensus 71 d~vi~~a~ 78 (253)
T 1xq6_A 71 DALVILTS 78 (253)
T ss_dssp SEEEECCC
T ss_pred CEEEEecc
Confidence 99999875
No 329
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=96.58 E-value=0.0053 Score=57.21 Aligned_cols=40 Identities=23% Similarity=0.274 Sum_probs=30.7
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEE-eC--CHHHHHHH
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVV-DI--SVSRINAW 42 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~-d~--~~~~~~~l 42 (362)
+||+|+|.|++|..+++.|.++ |+.+|+++ |. +++....+
T Consensus 4 ikVgI~G~GrIGr~l~R~l~~~-p~vevvaI~d~~~~~~~~~~l 46 (337)
T 3e5r_O 4 IKIGINGFGRIGRLVARVALQS-EDVELVAVNDPFITTDYMTYM 46 (337)
T ss_dssp EEEEEECCSHHHHHHHHHHHTC-SSEEEEEEECSSSCHHHHHHH
T ss_pred eEEEEECcCHHHHHHHHHHhCC-CCeEEEEEECCCCCHHHHHHh
Confidence 3999999999999999998875 46777766 42 56655554
No 330
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=96.57 E-value=0.0013 Score=62.16 Aligned_cols=33 Identities=21% Similarity=0.270 Sum_probs=31.3
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCH
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISV 36 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~ 36 (362)
|||.|||+|..|+.+|..|+++ |++|+++|+++
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~--G~~v~v~Er~~ 34 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKH--GIKVTIYERNS 34 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSC
T ss_pred CEEEEECcCHHHHHHHHHHHhC--CCCEEEEecCC
Confidence 8999999999999999999999 99999999764
No 331
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=96.56 E-value=0.00083 Score=62.01 Aligned_cols=73 Identities=19% Similarity=0.184 Sum_probs=49.9
Q ss_pred ceEEEEcCCh-hHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEE-E--e--cCHHhh
Q 017997 2 VKICCIGAGY-VGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLF-F--S--TDVEKH 75 (362)
Q Consensus 2 mkI~VIGlG~-~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~-~--t--~d~~~a 75 (362)
.++.|||.|. +|.++|..|+.. |.+|+++||+..++....+. +... ....+ + + .++.+.
T Consensus 178 k~vvVIG~G~iVG~~~A~~L~~~--gAtVtv~nR~~~~l~~ra~~---la~~----------~~~~t~~~~t~~~~L~e~ 242 (320)
T 1edz_A 178 KKCIVINRSEIVGRPLAALLAND--GATVYSVDVNNIQKFTRGES---LKLN----------KHHVEDLGEYSEDLLKKC 242 (320)
T ss_dssp CEEEEECCCTTTHHHHHHHHHTT--SCEEEEECSSEEEEEESCCC---SSCC----------CCEEEEEEECCHHHHHHH
T ss_pred CEEEEECCCcchHHHHHHHHHHC--CCEEEEEeCchHHHHhHHHH---Hhhh----------cccccccccccHhHHHHH
Confidence 4799999996 599999999998 89999999974332111110 0000 01111 1 2 567788
Q ss_pred hcCCcEEEEeccCC
Q 017997 76 VSEADIVFVSVNTP 89 (362)
Q Consensus 76 ~~~aDvVii~vptp 89 (362)
+.+||+||.+++.|
T Consensus 243 l~~ADIVIsAtg~p 256 (320)
T 1edz_A 243 SLDSDVVITGVPSE 256 (320)
T ss_dssp HHHCSEEEECCCCT
T ss_pred hccCCEEEECCCCC
Confidence 99999999999876
No 332
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=96.53 E-value=0.0026 Score=59.57 Aligned_cols=33 Identities=27% Similarity=0.521 Sum_probs=26.7
Q ss_pred ceEEEEc-CChhHHHHHHHHHHcCCCCeEEEEeCC
Q 017997 2 VKICCIG-AGYVGGPTMAVIALKCPSIEVAVVDIS 35 (362)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~la~~~~G~~V~~~d~~ 35 (362)
|||+|+| .|++|..+.+.|.++ |..+++.+...
T Consensus 5 ~kV~IiGAtG~iG~~llr~L~~~-p~~elv~v~s~ 38 (345)
T 2ozp_A 5 KTLSIVGASGYAGGEFLRLALSH-PYLEVKQVTSR 38 (345)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTC-TTEEEEEEBCS
T ss_pred CEEEEECCCCHHHHHHHHHHHcC-CCcEEEEEECc
Confidence 6899999 699999999999876 45687776543
No 333
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=96.53 E-value=0.0019 Score=58.80 Aligned_cols=73 Identities=16% Similarity=0.176 Sum_probs=48.8
Q ss_pred CceEEEEcC-ChhHHHHHHHHHHcCCCCeEEEEeCC------HHHHHHH---HcCCCCCCCCChHHHHhhhcCCCEEEec
Q 017997 1 MVKICCIGA-GYVGGPTMAVIALKCPSIEVAVVDIS------VSRINAW---NSDQLPIYEPGLDGVVKQCRGKNLFFST 70 (362)
Q Consensus 1 ~mkI~VIGl-G~~G~~lA~~la~~~~G~~V~~~d~~------~~~~~~l---~~~~~~~~e~~l~~~~~~~~~~~l~~t~ 70 (362)
||+|.|.|+ |.+|..++..|++. |++|++++|+ +++.+.+ ......+.. +.+.-..
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~------------~D~~d~~ 69 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDL--GHPTFLLVRESTASSNSEKAQLLESFKASGANIVH------------GSIDDHA 69 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHT--TCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEEC------------CCTTCHH
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhC--CCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEE------------eccCCHH
Confidence 468999996 99999999999999 9999999997 4444332 221111111 1111112
Q ss_pred CHHhhhcCCcEEEEecc
Q 017997 71 DVEKHVSEADIVFVSVN 87 (362)
Q Consensus 71 d~~~a~~~aDvVii~vp 87 (362)
++.++++++|+||.+.+
T Consensus 70 ~l~~~~~~~d~vi~~a~ 86 (308)
T 1qyc_A 70 SLVEAVKNVDVVISTVG 86 (308)
T ss_dssp HHHHHHHTCSEEEECCC
T ss_pred HHHHHHcCCCEEEECCc
Confidence 34456789999999875
No 334
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=96.50 E-value=0.0025 Score=58.18 Aligned_cols=74 Identities=11% Similarity=0.149 Sum_probs=50.4
Q ss_pred CceEEEEcC-ChhHHHHHHHHHHcCCCCeEEEEeCC-----HHHHHHHH---cCCCCCCCCChHHHHhhhcCCCEEEecC
Q 017997 1 MVKICCIGA-GYVGGPTMAVIALKCPSIEVAVVDIS-----VSRINAWN---SDQLPIYEPGLDGVVKQCRGKNLFFSTD 71 (362)
Q Consensus 1 ~mkI~VIGl-G~~G~~lA~~la~~~~G~~V~~~d~~-----~~~~~~l~---~~~~~~~e~~l~~~~~~~~~~~l~~t~d 71 (362)
||+|.|.|+ |.+|..++..|++. |++|++++|+ +++.+.+. .....+. .+.+.-..+
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~------------~~D~~d~~~ 69 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISL--GHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLI------------EASLDDHQR 69 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHT--TCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEE------------CCCSSCHHH
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhC--CCcEEEEECCCcccchhHHHHHHHHHhCCeEEE------------eCCCCCHHH
Confidence 478999995 99999999999999 9999999998 55554432 2111110 011111123
Q ss_pred HHhhhcCCcEEEEeccC
Q 017997 72 VEKHVSEADIVFVSVNT 88 (362)
Q Consensus 72 ~~~a~~~aDvVii~vpt 88 (362)
+.++++++|+||.+.+.
T Consensus 70 l~~~~~~~d~vi~~a~~ 86 (313)
T 1qyd_A 70 LVDALKQVDVVISALAG 86 (313)
T ss_dssp HHHHHTTCSEEEECCCC
T ss_pred HHHHHhCCCEEEECCcc
Confidence 45667899999999764
No 335
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=96.50 E-value=0.0018 Score=58.92 Aligned_cols=74 Identities=15% Similarity=0.130 Sum_probs=50.0
Q ss_pred CceEEEEcC-ChhHHHHHHHHHHcCCCCeEEEEeCCH-------HHHHHHH---cCCCCCCCCChHHHHhhhcCCCEEEe
Q 017997 1 MVKICCIGA-GYVGGPTMAVIALKCPSIEVAVVDISV-------SRINAWN---SDQLPIYEPGLDGVVKQCRGKNLFFS 69 (362)
Q Consensus 1 ~mkI~VIGl-G~~G~~lA~~la~~~~G~~V~~~d~~~-------~~~~~l~---~~~~~~~e~~l~~~~~~~~~~~l~~t 69 (362)
||+|.|.|+ |.+|..++..|++. |++|++++|++ ++.+.+. .....+.. +.+.-.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~------------~D~~d~ 67 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKA--GNPTYALVRKTITAANPETKEELIDNYQSLGVILLE------------GDINDH 67 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHH--TCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEE------------CCTTCH
T ss_pred CcEEEEECCCchHHHHHHHHHHhC--CCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEE------------eCCCCH
Confidence 689999996 99999999999999 99999999986 5554332 11111100 011101
Q ss_pred cCHHhhhcCCcEEEEeccC
Q 017997 70 TDVEKHVSEADIVFVSVNT 88 (362)
Q Consensus 70 ~d~~~a~~~aDvVii~vpt 88 (362)
+++.++++++|+||-+.+.
T Consensus 68 ~~l~~~~~~~d~vi~~a~~ 86 (307)
T 2gas_A 68 ETLVKAIKQVDIVICAAGR 86 (307)
T ss_dssp HHHHHHHTTCSEEEECSSS
T ss_pred HHHHHHHhCCCEEEECCcc
Confidence 2244567899999998763
No 336
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=96.48 E-value=0.0089 Score=55.15 Aligned_cols=74 Identities=15% Similarity=0.160 Sum_probs=52.0
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCC-eEEEEeCC---HHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEe--cC---H
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSI-EVAVVDIS---VSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFS--TD---V 72 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~-~V~~~d~~---~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t--~d---~ 72 (362)
.++.|+|+|.+|.+++..|++. |. +|++++|+ .++.+++.+. + .......+... ++ +
T Consensus 155 k~~lVlGaGG~g~aia~~L~~~--Ga~~V~i~nR~~~~~~~a~~la~~-----------~-~~~~~~~~~~~~~~~~~~l 220 (315)
T 3tnl_A 155 KKMTICGAGGAATAICIQAALD--GVKEISIFNRKDDFYANAEKTVEK-----------I-NSKTDCKAQLFDIEDHEQL 220 (315)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCSEEEEEECSSTTHHHHHHHHHH-----------H-HHHSSCEEEEEETTCHHHH
T ss_pred CEEEEECCChHHHHHHHHHHHC--CCCEEEEEECCCchHHHHHHHHHH-----------h-hhhcCCceEEeccchHHHH
Confidence 4789999999999999999998 87 89999999 8888776531 0 00000112221 22 3
Q ss_pred HhhhcCCcEEEEeccCC
Q 017997 73 EKHVSEADIVFVSVNTP 89 (362)
Q Consensus 73 ~~a~~~aDvVii~vptp 89 (362)
.+.+.++|+||-|+|..
T Consensus 221 ~~~l~~aDiIINaTp~G 237 (315)
T 3tnl_A 221 RKEIAESVIFTNATGVG 237 (315)
T ss_dssp HHHHHTCSEEEECSSTT
T ss_pred HhhhcCCCEEEECccCC
Confidence 44577999999997743
No 337
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=96.45 E-value=0.0012 Score=61.40 Aligned_cols=65 Identities=17% Similarity=0.253 Sum_probs=43.9
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCC-------CCeE-EEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHH
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCP-------SIEV-AVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVE 73 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~-------G~~V-~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~ 73 (362)
+||+|||+|.||..++..+.+... +.+| .++|+++++.+ + +. .-.+++|++
T Consensus 4 irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~----~--------~~---------~~~~~~d~~ 62 (332)
T 2ejw_A 4 LKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRDPRKPR----A--------IP---------QELLRAEPF 62 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSCTTSCC----S--------SC---------GGGEESSCC
T ss_pred eEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECCHHHhh----c--------cC---------cccccCCHH
Confidence 689999999999999999887510 2454 44577743211 1 10 012467777
Q ss_pred hhhcCCcEEEEeccC
Q 017997 74 KHVSEADIVFVSVNT 88 (362)
Q Consensus 74 ~a~~~aDvVii~vpt 88 (362)
+.+ +.|+|++|+|+
T Consensus 63 ~ll-~iDvVve~t~~ 76 (332)
T 2ejw_A 63 DLL-EADLVVEAMGG 76 (332)
T ss_dssp CCT-TCSEEEECCCC
T ss_pred HHh-CCCEEEECCCC
Confidence 767 99999999764
No 338
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=96.43 E-value=0.0036 Score=58.73 Aligned_cols=31 Identities=29% Similarity=0.591 Sum_probs=26.2
Q ss_pred ceEEEEc-CChhHHHHHHHHHHcCCCCeEEEEe
Q 017997 2 VKICCIG-AGYVGGPTMAVIALKCPSIEVAVVD 33 (362)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~la~~~~G~~V~~~d 33 (362)
+||+|+| .|++|..+...|.++ |..+++.+.
T Consensus 5 ~kV~IiGAtG~iG~~llr~L~~~-p~~elvai~ 36 (350)
T 2ep5_A 5 IKVSLLGSTGMVGQKMVKMLAKH-PYLELVKVS 36 (350)
T ss_dssp EEEEEESCSSHHHHHHHHHHTTC-SSEEEEEEE
T ss_pred cEEEEECcCCHHHHHHHHHHHhC-CCcEEEEEe
Confidence 6899999 799999999988875 567887774
No 339
>2b0j_A 5,10-methenyltetrahydromethanopterin hydrogenase; rossmann fold, helix bundle, oxidoreductase; 1.75A {Methanocaldococcus jannaschii} SCOP: a.100.1.11 c.2.1.6 PDB: 3f47_A* 3daf_A* 3dag_A* 3f46_A* 3h65_A*
Probab=96.42 E-value=0.076 Score=47.55 Aligned_cols=113 Identities=19% Similarity=0.185 Sum_probs=76.9
Q ss_pred CEEEecCHHhhhcCCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhc
Q 017997 65 NLFFSTDVEKHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHN 144 (362)
Q Consensus 65 ~l~~t~d~~~a~~~aDvVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~ 144 (362)
++..++|-.+|++++|++|+-+| ... .-...++.+.++++.+.+|.++.|+|+-. +...++..
T Consensus 128 GVkVtsDD~EAvk~AEi~IlftP--fG~------------~t~~Iakkii~~lpEgAII~nTCTipp~~---ly~~le~l 190 (358)
T 2b0j_A 128 GLKVTSDDREAVEGADIVITWLP--KGN------------KQPDIIKKFADAIPEGAIVTHACTIPTTK---FAKIFKDL 190 (358)
T ss_dssp TCEEESCHHHHHTTCSEEEECCT--TCT------------THHHHHHHHGGGSCTTCEEEECSSSCHHH---HHHHHHHT
T ss_pred CcEeecchHHHhcCCCEEEEecC--CCC------------CcHHHHHHHHhhCcCCCEEecccCCCHHH---HHHHHHHh
Confidence 46788888889999999999965 432 12678899999999999999999998754 34444443
Q ss_pred cCCCceEEe-eCCcccccCccccccCCCCeEEEecCCCcchHHHHHHHHHHHhccCCCCcEEe
Q 017997 145 SKGIKFQIL-SNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDRILT 206 (362)
Q Consensus 145 ~~g~~~~v~-~~Pe~~~~g~a~~~~~~~~~viiG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 206 (362)
.+ .|+.+. |+|- ..||..- +..+|.. -.+++..+++.+|-++.. +..+..
T Consensus 191 ~R-~DvgIsS~HPa-aVPgt~G-------q~~~g~~--yAtEEqIeklveLaksa~-k~ay~v 241 (358)
T 2b0j_A 191 GR-EDLNITSYHPG-CVPEMKG-------QVYIAEG--YASEEAVNKLYEIGKIAR-GKAFKM 241 (358)
T ss_dssp TC-TTSEEEECBCS-SCTTTCC-------CEEEEES--SSCHHHHHHHHHHHHHHH-SCEEEE
T ss_pred Cc-ccCCeeccCCC-CCCCCCC-------ccccccc--cCCHHHHHHHHHHHHHhC-CCeEec
Confidence 22 344443 6774 4466531 2345532 235889999999998876 345543
No 340
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=96.38 E-value=0.0012 Score=61.05 Aligned_cols=73 Identities=16% Similarity=0.205 Sum_probs=47.6
Q ss_pred CceEEEEc-CChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCC
Q 017997 1 MVKICCIG-AGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEA 79 (362)
Q Consensus 1 ~mkI~VIG-lG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~a 79 (362)
+|+|.|.| .|++|..++..|++. |++|+++++++++.+.+.+....+.. +.+.-..+..++++++
T Consensus 13 ~M~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~l~~~~~~~~~------------~Dl~d~~~~~~~~~~~ 78 (342)
T 2x4g_A 13 HVKYAVLGATGLLGHHAARAIRAA--GHDLVLIHRPSSQIQRLAYLEPECRV------------AEMLDHAGLERALRGL 78 (342)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECTTSCGGGGGGGCCEEEE------------CCTTCHHHHHHHTTTC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEecChHhhhhhccCCeEEEE------------ecCCCHHHHHHHHcCC
Confidence 37999999 599999999999999 99999999987654433321110000 1111011234567789
Q ss_pred cEEEEecc
Q 017997 80 DIVFVSVN 87 (362)
Q Consensus 80 DvVii~vp 87 (362)
|+||-+..
T Consensus 79 d~vih~a~ 86 (342)
T 2x4g_A 79 DGVIFSAG 86 (342)
T ss_dssp SEEEEC--
T ss_pred CEEEECCc
Confidence 99998875
No 341
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=96.38 E-value=0.0035 Score=61.94 Aligned_cols=36 Identities=19% Similarity=0.217 Sum_probs=32.8
Q ss_pred CceEEEEc-CChhHHHHHHHHHHcCCCCeEEEEeCCHHH
Q 017997 1 MVKICCIG-AGYVGGPTMAVIALKCPSIEVAVVDISVSR 38 (362)
Q Consensus 1 ~mkI~VIG-lG~~G~~lA~~la~~~~G~~V~~~d~~~~~ 38 (362)
+|||.|.| .|++|..++..|++. |++|+++++++.+
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~--G~~V~~l~R~~~~ 183 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTG--GHEVIQLVRKEPK 183 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESSSCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCCCC
Confidence 58999999 699999999999999 9999999998653
No 342
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=96.35 E-value=0.019 Score=52.49 Aligned_cols=104 Identities=13% Similarity=0.153 Sum_probs=65.3
Q ss_pred ceEEEEcC-ChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhc--C
Q 017997 2 VKICCIGA-GYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS--E 78 (362)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~--~ 78 (362)
.+|.|+|+ |.+|..++..+.+. |++ .++.+||.+. +. . ...+.+..+++++.+ .
T Consensus 14 ~~vvV~Gasg~~G~~~~~~l~~~--g~~-~v~~VnP~~~-----g~-~--------------i~G~~vy~sl~el~~~~~ 70 (297)
T 2yv2_A 14 TRVLVQGITGREGSFHAKAMLEY--GTK-VVAGVTPGKG-----GS-E--------------VHGVPVYDSVKEALAEHP 70 (297)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH--TCE-EEEEECTTCT-----TC-E--------------ETTEEEESSHHHHHHHCT
T ss_pred CEEEEECCCCCHHHHHHHHHHhC--CCc-EEEEeCCCCC-----Cc-e--------------ECCEeeeCCHHHHhhcCC
Confidence 36888898 99999999999888 898 5566665421 00 0 013667788888665 4
Q ss_pred -CcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhc
Q 017997 79 -ADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHN 144 (362)
Q Consensus 79 -aDvVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~ 144 (362)
+|++++++|.+ ...+++++..+. ....+|+.++.++....+++.+..++.
T Consensus 71 ~~DvaIi~vp~~---------------~~~~~v~ea~~~-Gi~~vVi~t~G~~~~~~~~l~~~A~~~ 121 (297)
T 2yv2_A 71 EINTSIVFVPAP---------------FAPDAVYEAVDA-GIRLVVVITEGIPVHDTMRFVNYARQK 121 (297)
T ss_dssp TCCEEEECCCGG---------------GHHHHHHHHHHT-TCSEEEECCCCCCHHHHHHHHHHHHHH
T ss_pred CCCEEEEecCHH---------------HHHHHHHHHHHC-CCCEEEEECCCCCHHHHHHHHHHHHHc
Confidence 99999998743 234555555543 233355544446543344666665554
No 343
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=96.34 E-value=0.03 Score=48.89 Aligned_cols=66 Identities=18% Similarity=0.324 Sum_probs=45.8
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCH-HHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEe---cCHHhhhc
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISV-SRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFS---TDVEKHVS 77 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~-~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t---~d~~~a~~ 77 (362)
++|.|||.|.+|..-+..|.+. |.+|++++.+. +.++.+.+. +++++. -+.+ .+.
T Consensus 32 k~VLVVGgG~va~~ka~~Ll~~--GA~VtVvap~~~~~l~~l~~~------------------~~i~~i~~~~~~~-dL~ 90 (223)
T 3dfz_A 32 RSVLVVGGGTIATRRIKGFLQE--GAAITVVAPTVSAEINEWEAK------------------GQLRVKRKKVGEE-DLL 90 (223)
T ss_dssp CCEEEECCSHHHHHHHHHHGGG--CCCEEEECSSCCHHHHHHHHT------------------TSCEEECSCCCGG-GSS
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCEEEEECCCCCHHHHHHHHc------------------CCcEEEECCCCHh-HhC
Confidence 5799999999999999999999 99999998753 233443321 112211 1122 378
Q ss_pred CCcEEEEeccC
Q 017997 78 EADIVFVSVNT 88 (362)
Q Consensus 78 ~aDvVii~vpt 88 (362)
++|+||.|+..
T Consensus 91 ~adLVIaAT~d 101 (223)
T 3dfz_A 91 NVFFIVVATND 101 (223)
T ss_dssp SCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 99999999653
No 344
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=96.34 E-value=0.0021 Score=60.03 Aligned_cols=33 Identities=21% Similarity=0.391 Sum_probs=26.8
Q ss_pred CceEEEEc-CChhHHHHHHHHHHcC-CCCeEEEEe
Q 017997 1 MVKICCIG-AGYVGGPTMAVIALKC-PSIEVAVVD 33 (362)
Q Consensus 1 ~mkI~VIG-lG~~G~~lA~~la~~~-~G~~V~~~d 33 (362)
||||+|+| .|++|.-+...|.++. |.++++.+.
T Consensus 3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~ 37 (336)
T 2r00_A 3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLA 37 (336)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEE
Confidence 58999999 9999999999888762 356677765
No 345
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=96.33 E-value=0.0027 Score=58.25 Aligned_cols=73 Identities=21% Similarity=0.209 Sum_probs=48.9
Q ss_pred CceEEEEcC-ChhHHHHHHHHHHcCCCCeEEEEeCCH------HHHHHHH---cCCCCCCCCChHHHHhhhcCCCEEEec
Q 017997 1 MVKICCIGA-GYVGGPTMAVIALKCPSIEVAVVDISV------SRINAWN---SDQLPIYEPGLDGVVKQCRGKNLFFST 70 (362)
Q Consensus 1 ~mkI~VIGl-G~~G~~lA~~la~~~~G~~V~~~d~~~------~~~~~l~---~~~~~~~e~~l~~~~~~~~~~~l~~t~ 70 (362)
||+|.|.|. |.+|..++..|++. |++|++++|++ ++.+.+. .....+.. +.+.-.+
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~------------~D~~d~~ 69 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSF--SHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIE------------GEMEEHE 69 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHT--TCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEE------------CCTTCHH
T ss_pred ccEEEEEcCCchhHHHHHHHHHhC--CCcEEEEECCcccccChHHHHHHHHhhcCCcEEEE------------ecCCCHH
Confidence 578999995 99999999999998 99999999985 3433332 11111100 0111112
Q ss_pred CHHhhhcCCcEEEEecc
Q 017997 71 DVEKHVSEADIVFVSVN 87 (362)
Q Consensus 71 d~~~a~~~aDvVii~vp 87 (362)
++.++++++|+||.+.+
T Consensus 70 ~l~~a~~~~d~vi~~a~ 86 (321)
T 3c1o_A 70 KMVSVLKQVDIVISALP 86 (321)
T ss_dssp HHHHHHTTCSEEEECCC
T ss_pred HHHHHHcCCCEEEECCC
Confidence 34556789999999875
No 346
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=96.32 E-value=0.0048 Score=56.13 Aligned_cols=108 Identities=17% Similarity=0.225 Sum_probs=65.8
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcE
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (362)
+++.|+|+|.+|.++|..|++. | +|++++|++++.+.+.+.. .........-.+..+ +..+.+.++|+
T Consensus 129 k~vlV~GaGgiG~aia~~L~~~--G-~V~v~~r~~~~~~~l~~~~--------~~~~~~~~~~~~d~~-~~~~~~~~~Di 196 (287)
T 1nvt_A 129 KNIVIYGAGGAARAVAFELAKD--N-NIIIANRTVEKAEALAKEI--------AEKLNKKFGEEVKFS-GLDVDLDGVDI 196 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHTSS--S-EEEEECSSHHHHHHHHHHH--------HHHHTCCHHHHEEEE-CTTCCCTTCCE
T ss_pred CEEEEECchHHHHHHHHHHHHC--C-CEEEEECCHHHHHHHHHHH--------hhhcccccceeEEEe-eHHHhhCCCCE
Confidence 4799999999999999999999 9 9999999998887765310 000000000012232 23344788999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCcccc
Q 017997 82 VFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKT 133 (362)
Q Consensus 82 Vii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt 133 (362)
+|-|+|.+...+ .+...+. -...++++.+|++.++.|..|
T Consensus 197 lVn~ag~~~~~~-------~~~~~~~-----~~~~l~~~~~v~Dv~y~p~~t 236 (287)
T 1nvt_A 197 IINATPIGMYPN-------IDVEPIV-----KAEKLREDMVVMDLIYNPLET 236 (287)
T ss_dssp EEECSCTTCTTC-------CSSCCSS-----CSTTCCSSSEEEECCCSSSSC
T ss_pred EEECCCCCCCCC-------CCCCCCC-----CHHHcCCCCEEEEeeeCCccC
Confidence 999987543210 0000000 013456788888877755433
No 347
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=96.31 E-value=0.0028 Score=58.93 Aligned_cols=68 Identities=15% Similarity=0.094 Sum_probs=49.5
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCC--CCChHHHHhhhcCCCEEEecCHHhh-hcC
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIY--EPGLDGVVKQCRGKNLFFSTDVEKH-VSE 78 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~--e~~l~~~~~~~~~~~l~~t~d~~~a-~~~ 78 (362)
++|.|+|+|.+|..++..|.+. |+ |+++|+|+++++ +++...+.. ++...+ .+.++ +++
T Consensus 116 ~~viI~G~G~~g~~l~~~L~~~--g~-v~vid~~~~~~~-~~~~~~~~i~gd~~~~~--------------~L~~a~i~~ 177 (336)
T 1lnq_A 116 RHVVICGWSESTLECLRELRGS--EV-FVLAEDENVRKK-VLRSGANFVHGDPTRVS--------------DLEKANVRG 177 (336)
T ss_dssp CEEEEESCCHHHHHHHTTGGGS--CE-EEEESCGGGHHH-HHHTTCEEEESCTTSHH--------------HHHHTCSTT
T ss_pred CCEEEECCcHHHHHHHHHHHhC--Cc-EEEEeCChhhhh-HHhCCcEEEEeCCCCHH--------------HHHhcChhh
Confidence 4799999999999999999988 89 999999999998 765322211 111111 12223 678
Q ss_pred CcEEEEecc
Q 017997 79 ADIVFVSVN 87 (362)
Q Consensus 79 aDvVii~vp 87 (362)
||.++++++
T Consensus 178 a~~vi~~~~ 186 (336)
T 1lnq_A 178 ARAVIVDLE 186 (336)
T ss_dssp EEEEEECCS
T ss_pred ccEEEEcCC
Confidence 999999975
No 348
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=96.29 E-value=0.0022 Score=60.36 Aligned_cols=32 Identities=25% Similarity=0.364 Sum_probs=25.7
Q ss_pred ceEEEEc-CChhHHHHHHHHHHcCCCCeEEEEeC
Q 017997 2 VKICCIG-AGYVGGPTMAVIALKCPSIEVAVVDI 34 (362)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~la~~~~G~~V~~~d~ 34 (362)
+||+|+| .||+|.-+...|.++ |..++..+..
T Consensus 8 ~kVaIvGATGyvG~eLlrlL~~h-P~~el~~l~S 40 (359)
T 4dpl_A 8 LKAAILGATGLVGIEYVRMLSNH-PYIKPAYLAG 40 (359)
T ss_dssp EEEEETTTTSTTHHHHHHHHTTC-SSEEEEEEEE
T ss_pred CeEEEECCCCHHHHHHHHHHHhC-CCceEEEEEC
Confidence 4899999 699999999988765 5667776643
No 349
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=96.29 E-value=0.0022 Score=60.36 Aligned_cols=32 Identities=25% Similarity=0.364 Sum_probs=25.7
Q ss_pred ceEEEEc-CChhHHHHHHHHHHcCCCCeEEEEeC
Q 017997 2 VKICCIG-AGYVGGPTMAVIALKCPSIEVAVVDI 34 (362)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~la~~~~G~~V~~~d~ 34 (362)
+||+|+| .||+|.-+...|.++ |..++..+..
T Consensus 8 ~kVaIvGATGyvG~eLlrlL~~h-P~~el~~l~S 40 (359)
T 4dpk_A 8 LKAAILGATGLVGIEYVRMLSNH-PYIKPAYLAG 40 (359)
T ss_dssp EEEEETTTTSTTHHHHHHHHTTC-SSEEEEEEEE
T ss_pred CeEEEECCCCHHHHHHHHHHHhC-CCceEEEEEC
Confidence 4899999 699999999988765 5667776643
No 350
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=96.25 E-value=0.0089 Score=55.92 Aligned_cols=94 Identities=16% Similarity=0.264 Sum_probs=57.6
Q ss_pred CceEEEEc-CChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEe-cCHHhhhcC
Q 017997 1 MVKICCIG-AGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFS-TDVEKHVSE 78 (362)
Q Consensus 1 ~mkI~VIG-lG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t-~d~~~a~~~ 78 (362)
|.||+||| .||+|.-+.+.|.++ |..++..+.-....=+.+ .+...... ..+.+. .+.++...+
T Consensus 13 ~~~V~IvGAtG~vG~ellrlL~~h-P~~el~~l~S~~~aG~~~------------~~~~p~~~-~~l~~~~~~~~~~~~~ 78 (351)
T 1vkn_A 13 MIRAGIIGATGYTGLELVRLLKNH-PEAKITYLSSRTYAGKKL------------EEIFPSTL-ENSILSEFDPEKVSKN 78 (351)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHC-TTEEEEEEECSTTTTSBH------------HHHCGGGC-CCCBCBCCCHHHHHHH
T ss_pred eeEEEEECCCCHHHHHHHHHHHcC-CCcEEEEEeCcccccCCh------------HHhChhhc-cCceEEeCCHHHhhcC
Confidence 56999998 599999999999987 567877776432110011 11100000 112222 244443378
Q ss_pred CcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeC
Q 017997 79 ADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKST 128 (362)
Q Consensus 79 aDvVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~ST 128 (362)
+|++|+|+|.. +..++.+.+ .+..||+-|+
T Consensus 79 ~Dvvf~alp~~-------------------~s~~~~~~~-~g~~VIDlSs 108 (351)
T 1vkn_A 79 CDVLFTALPAG-------------------ASYDLVREL-KGVKIIDLGA 108 (351)
T ss_dssp CSEEEECCSTT-------------------HHHHHHTTC-CSCEEEESSS
T ss_pred CCEEEECCCcH-------------------HHHHHHHHh-CCCEEEECCh
Confidence 99999998732 344556666 7888998776
No 351
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=96.23 E-value=0.0046 Score=58.24 Aligned_cols=33 Identities=24% Similarity=0.607 Sum_probs=27.1
Q ss_pred ceEEEEc-CChhHHHHHHHHHHcCCCCeEEEEeCC
Q 017997 2 VKICCIG-AGYVGGPTMAVIALKCPSIEVAVVDIS 35 (362)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~la~~~~G~~V~~~d~~ 35 (362)
+||+|+| .|++|..+.+.|.++ |..+++.+...
T Consensus 17 ~kV~IiGAtG~iG~~llr~L~~~-p~~elvai~~~ 50 (359)
T 1xyg_A 17 IRIGLLGASGYTGAEIVRLLANH-PHFQVTLMTAD 50 (359)
T ss_dssp EEEEEECCSSHHHHHHHHHHHTC-SSEEEEEEBCS
T ss_pred cEEEEECcCCHHHHHHHHHHHcC-CCcEEEEEeCc
Confidence 5899999 899999999999876 45688777543
No 352
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=96.17 E-value=0.0045 Score=55.56 Aligned_cols=74 Identities=9% Similarity=0.192 Sum_probs=47.8
Q ss_pred eEEEEcC-ChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcE
Q 017997 3 KICCIGA-GYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (362)
Q Consensus 3 kI~VIGl-G~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (362)
+|.|.|+ |.+|..++..|++..+|++|+++++++++.+.+......+.. +.+.-.++..++++++|+
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~------------~D~~d~~~~~~~~~~~d~ 68 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQ------------ADYGDEAALTSALQGVEK 68 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHTTCEEEE------------CCTTCHHHHHHHTTTCSE
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcCCCeEEE------------cCCCCHHHHHHHHhCCCE
Confidence 5889996 999999999998753379999999988766555432111100 111111224456788999
Q ss_pred EEEeccC
Q 017997 82 VFVSVNT 88 (362)
Q Consensus 82 Vii~vpt 88 (362)
||-+...
T Consensus 69 vi~~a~~ 75 (286)
T 2zcu_A 69 LLLISSS 75 (286)
T ss_dssp EEECC--
T ss_pred EEEeCCC
Confidence 9988653
No 353
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=96.17 E-value=0.058 Score=53.31 Aligned_cols=113 Identities=12% Similarity=0.021 Sum_probs=67.6
Q ss_pred ceEEEEcCChhHHH-HHHHHHHcCCCCeEEEEeCCH--HHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcC
Q 017997 2 VKICCIGAGYVGGP-TMAVIALKCPSIEVAVVDISV--SRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSE 78 (362)
Q Consensus 2 mkI~VIGlG~~G~~-lA~~la~~~~G~~V~~~d~~~--~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~ 78 (362)
++|-|||.|..|.+ +|..|.+. |++|+++|.+. ...+.|++...+ +..-.+.+....+
T Consensus 20 ~~i~~iGiGg~Gms~lA~~l~~~--G~~V~~sD~~~~~~~~~~L~~~gi~-----------------~~~G~~~~~~~~~ 80 (524)
T 3hn7_A 20 MHIHILGICGTFMGSLALLARAL--GHTVTGSDANIYPPMSTQLEQAGVT-----------------IEEGYLIAHLQPA 80 (524)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCCCTTHHHHHHHTTCE-----------------EEESCCGGGGCSC
T ss_pred CEEEEEEecHhhHHHHHHHHHhC--CCEEEEECCCCCcHHHHHHHHCCCE-----------------EECCCCHHHcCCC
Confidence 68999999999997 67777888 99999999863 334445432111 2222334442357
Q ss_pred CcEEEEeccCCCCCCCCCCCCCCChHHHHHHHH---------H-HHhhc-CCCCEEEEeeCCccccHHH-HHHHHHhc
Q 017997 79 ADIVFVSVNTPTKTQGLGAGKAADLTYWESAAR---------V-IADVS-KSDKIVVEKSTVPVKTAEA-IEKILTHN 144 (362)
Q Consensus 79 aDvVii~vptp~~~~g~~~~~~~d~~~l~~~~~---------~-i~~~l-~~~~iVv~~STv~~gt~~~-l~~~l~~~ 144 (362)
+|+||++-.-|.+ .| .+..+.+ + +...+ +...+|.++.|..-.||.. +..+|++.
T Consensus 81 ~d~vV~Spgi~~~--------~p---~l~~a~~~gi~v~~~~e~l~~~~~~~~~vIaVTGTnGKTTTt~li~~iL~~~ 147 (524)
T 3hn7_A 81 PDLVVVGNAMKRG--------MD---VIEYMLDTGLRYTSGPQFLSEQVLQSRHVIAVAGTHGKTTTTTMLAWILHYA 147 (524)
T ss_dssp CSEEEECTTCCTT--------SH---HHHHHHHHTCCEEEHHHHHHHHTGGGSEEEEEECSSCHHHHHHHHHHHHHHT
T ss_pred CCEEEECCCcCCC--------CH---HHHHHHHCCCcEEEHHHHHHHHHhccCcEEEEECCCCHHHHHHHHHHHHHHc
Confidence 8999887433321 22 2333322 1 23322 3446777778876666654 56677654
No 354
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=96.16 E-value=0.0029 Score=58.83 Aligned_cols=72 Identities=18% Similarity=0.165 Sum_probs=48.7
Q ss_pred ceEEEEcC-ChhHHHHHHHHHHcCCCCeEEEEeCCH----HHHHHHH---cCCCCCCCCChHHHHhhhcCCCEEEecCHH
Q 017997 2 VKICCIGA-GYVGGPTMAVIALKCPSIEVAVVDISV----SRINAWN---SDQLPIYEPGLDGVVKQCRGKNLFFSTDVE 73 (362)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~la~~~~G~~V~~~d~~~----~~~~~l~---~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~ 73 (362)
|+|.|.|+ |++|..++..|++. |++|++++|++ ++.+.+. .....+.. +.+.-..++.
T Consensus 11 ~~IlVtGatG~iG~~l~~~L~~~--g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~------------~Dl~d~~~l~ 76 (346)
T 3i6i_A 11 GRVLIAGATGFIGQFVATASLDA--HRPTYILARPGPRSPSKAKIFKALEDKGAIIVY------------GLINEQEAME 76 (346)
T ss_dssp CCEEEECTTSHHHHHHHHHHHHT--TCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEE------------CCTTCHHHHH
T ss_pred CeEEEECCCcHHHHHHHHHHHHC--CCCEEEEECCCCCChhHHHHHHHHHhCCcEEEE------------eecCCHHHHH
Confidence 68999997 99999999999999 89999999976 5554332 21111110 1111112344
Q ss_pred hhhc--CCcEEEEecc
Q 017997 74 KHVS--EADIVFVSVN 87 (362)
Q Consensus 74 ~a~~--~aDvVii~vp 87 (362)
++++ ++|+||-+.+
T Consensus 77 ~~~~~~~~d~Vi~~a~ 92 (346)
T 3i6i_A 77 KILKEHEIDIVVSTVG 92 (346)
T ss_dssp HHHHHTTCCEEEECCC
T ss_pred HHHhhCCCCEEEECCc
Confidence 5667 9999999975
No 355
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=96.14 E-value=0.025 Score=52.94 Aligned_cols=32 Identities=22% Similarity=0.287 Sum_probs=29.9
Q ss_pred ceEEEEc-CChhHHHHHHHHHHcCCCC-eEEEEeCC
Q 017997 2 VKICCIG-AGYVGGPTMAVIALKCPSI-EVAVVDIS 35 (362)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~la~~~~G~-~V~~~d~~ 35 (362)
|||.|.| .|++|..++..|++. |+ +|+..|++
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~--g~~~v~~~d~~ 34 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTST--TDHHIFEVHRQ 34 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH--CCCEEEECCTT
T ss_pred CEEEEECCCCHHHHHHHHHHHhC--CCCEEEEECCC
Confidence 7999999 699999999999999 88 99999984
No 356
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=96.13 E-value=0.0014 Score=56.88 Aligned_cols=69 Identities=10% Similarity=0.330 Sum_probs=44.4
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEE-EeCCHH-HHHH-HHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhc-
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAV-VDISVS-RINA-WNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS- 77 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~-~d~~~~-~~~~-l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~- 77 (362)
.+|+|+|+|.+|..++..+.....|+++++ +|.|++ ++.. .-.| .| +.-.+++++.++
T Consensus 85 ~~V~IvGaG~lG~aLa~~~~~~~~g~~iVg~~D~dp~~kiG~~~i~G-vp-----------------V~~~~dL~~~v~~ 146 (212)
T 3keo_A 85 TNVMLVGCGNIGRALLHYRFHDRNKMQISMAFDLDSNDLVGKTTEDG-IP-----------------VYGISTINDHLID 146 (212)
T ss_dssp EEEEEECCSHHHHHHTTCCCCTTSSEEEEEEEECTTSTTTTCBCTTC-CB-----------------EEEGGGHHHHC-C
T ss_pred CEEEEECcCHHHHHHHHhhhcccCCeEEEEEEeCCchhccCceeECC-eE-----------------EeCHHHHHHHHHH
Confidence 479999999999999887421112777665 599987 5432 1111 12 222355666554
Q ss_pred -CCcEEEEeccC
Q 017997 78 -EADIVFVSVNT 88 (362)
Q Consensus 78 -~aDvVii~vpt 88 (362)
+.|.+++|+|+
T Consensus 147 ~~Id~vIIAvPs 158 (212)
T 3keo_A 147 SDIETAILTVPS 158 (212)
T ss_dssp CSCCEEEECSCG
T ss_pred cCCCEEEEecCc
Confidence 68999999874
No 357
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=96.11 E-value=0.021 Score=51.40 Aligned_cols=55 Identities=24% Similarity=0.411 Sum_probs=43.0
Q ss_pred ceEEEEcCCh-hHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCc
Q 017997 2 VKICCIGAGY-VGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (362)
Q Consensus 2 mkI~VIGlG~-~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (362)
.++.|||.|. +|.++|..|...+.|.+|+++++. +.++.+.+++||
T Consensus 159 k~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~---------------------------------t~~L~~~~~~AD 205 (281)
T 2c2x_A 159 AHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTG---------------------------------TRDLPALTRQAD 205 (281)
T ss_dssp CEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTT---------------------------------CSCHHHHHTTCS
T ss_pred CEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECc---------------------------------hhHHHHHHhhCC
Confidence 4799999997 599999999876214789988642 135666789999
Q ss_pred EEEEeccCC
Q 017997 81 IVFVSVNTP 89 (362)
Q Consensus 81 vVii~vptp 89 (362)
+||.+++.|
T Consensus 206 IVI~Avg~p 214 (281)
T 2c2x_A 206 IVVAAVGVA 214 (281)
T ss_dssp EEEECSCCT
T ss_pred EEEECCCCC
Confidence 999999876
No 358
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=96.02 E-value=0.0061 Score=55.80 Aligned_cols=71 Identities=18% Similarity=0.180 Sum_probs=47.2
Q ss_pred eEEEEcC-ChhHHHHHHHHHHcCCCCeEEEEeCCHH-HHHH---HHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhc
Q 017997 3 KICCIGA-GYVGGPTMAVIALKCPSIEVAVVDISVS-RINA---WNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS 77 (362)
Q Consensus 3 kI~VIGl-G~~G~~lA~~la~~~~G~~V~~~d~~~~-~~~~---l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~ 77 (362)
+|.|.|+ |.+|..++..|++. |++|++++|+++ +.+. +......+.. +.+.-.+++.++++
T Consensus 13 ~ilVtGatG~iG~~l~~~L~~~--g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~------------~Dl~d~~~l~~a~~ 78 (318)
T 2r6j_A 13 KILIFGGTGYIGNHMVKGSLKL--GHPTYVFTRPNSSKTTLLDEFQSLGAIIVK------------GELDEHEKLVELMK 78 (318)
T ss_dssp CEEEETTTSTTHHHHHHHHHHT--TCCEEEEECTTCSCHHHHHHHHHTTCEEEE------------CCTTCHHHHHHHHT
T ss_pred eEEEECCCchHHHHHHHHHHHC--CCcEEEEECCCCchhhHHHHhhcCCCEEEE------------ecCCCHHHHHHHHc
Confidence 8999995 99999999999999 999999999864 3322 2221111100 01111123455678
Q ss_pred CCcEEEEecc
Q 017997 78 EADIVFVSVN 87 (362)
Q Consensus 78 ~aDvVii~vp 87 (362)
++|+||.+.+
T Consensus 79 ~~d~vi~~a~ 88 (318)
T 2r6j_A 79 KVDVVISALA 88 (318)
T ss_dssp TCSEEEECCC
T ss_pred CCCEEEECCc
Confidence 9999999875
No 359
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=95.99 E-value=0.046 Score=50.13 Aligned_cols=103 Identities=14% Similarity=0.075 Sum_probs=64.4
Q ss_pred eEEEE-cC-ChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhc--C
Q 017997 3 KICCI-GA-GYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS--E 78 (362)
Q Consensus 3 kI~VI-Gl-G~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~--~ 78 (362)
+|+|| |+ |.+|...+..|.+. |++ .++++||.+.. + . ...+.+..+++++.+ .
T Consensus 15 siaVV~Gasg~~G~~~~~~l~~~--G~~-~v~~VnP~~~g---~---~--------------i~G~~vy~sl~el~~~~~ 71 (305)
T 2fp4_A 15 TKVICQGFTGKQGTFHSQQALEY--GTN-LVGGTTPGKGG---K---T--------------HLGLPVFNTVKEAKEQTG 71 (305)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH--TCE-EEEEECTTCTT---C---E--------------ETTEEEESSHHHHHHHHC
T ss_pred cEEEEECCCCCHHHHHHHHHHHC--CCc-EEEEeCCCcCc---c---e--------------ECCeeeechHHHhhhcCC
Confidence 58888 98 99999999999988 898 55677664210 0 0 013666777888777 8
Q ss_pred CcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhc
Q 017997 79 ADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHN 144 (362)
Q Consensus 79 aDvVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~ 144 (362)
.|++++++|.+ ...+++++..+. .-..+|+..+.++....+++.+..++.
T Consensus 72 vD~avI~vP~~---------------~~~~~~~e~i~~-Gi~~iv~~t~G~~~~~~~~l~~~a~~~ 121 (305)
T 2fp4_A 72 ATASVIYVPPP---------------FAAAAINEAIDA-EVPLVVCITEGIPQQDMVRVKHRLLRQ 121 (305)
T ss_dssp CCEEEECCCHH---------------HHHHHHHHHHHT-TCSEEEECCCCCCHHHHHHHHHHHTTC
T ss_pred CCEEEEecCHH---------------HHHHHHHHHHHC-CCCEEEEECCCCChHHHHHHHHHHHhc
Confidence 99999998842 345555555543 234445543333322222555555554
No 360
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*
Probab=95.99 E-value=0.0087 Score=55.65 Aligned_cols=42 Identities=26% Similarity=0.377 Sum_probs=31.3
Q ss_pred CceEEEEcCChhHHHHHHHHHHcCCCCeEEEE-eC-CHHHHHHHH
Q 017997 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVV-DI-SVSRINAWN 43 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~-d~-~~~~~~~l~ 43 (362)
|+||+|+|.|++|.-+.+.|.++ |..+|+++ |+ +++....+-
T Consensus 1 mikVgI~G~G~iGr~l~R~l~~~-~~veivain~~~~~~~~~~ll 44 (334)
T 3cmc_O 1 AVKVGINGFGRIGRNVFRAALKN-PDIEVVAVNDLTDANTLAHLL 44 (334)
T ss_dssp CEEEEEESCSHHHHHHHHHHTTC-TTEEEEEEECSSCHHHHHHHH
T ss_pred CeEEEEECCCHHHHHHHHHHhCC-CCeEEEEEeCCCCHHHHHHHh
Confidence 78999999999999999888765 46677766 43 455554443
No 361
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=95.97 E-value=0.0069 Score=56.80 Aligned_cols=31 Identities=19% Similarity=0.544 Sum_probs=25.9
Q ss_pred CceEEEEc-CChhHHHHHHHHHHcCCC------CeEEEEe
Q 017997 1 MVKICCIG-AGYVGGPTMAVIALKCPS------IEVAVVD 33 (362)
Q Consensus 1 ~mkI~VIG-lG~~G~~lA~~la~~~~G------~~V~~~d 33 (362)
||||+|+| .|++|..+...|.++ + ++++.+.
T Consensus 9 m~kVaIvGATG~vG~~llr~L~~~--~~~~~~~~ei~~l~ 46 (352)
T 2nqt_A 9 ATKVAVAGASGYAGGEILRLLLGH--PAYADGRLRIGALT 46 (352)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTC--HHHHTTSEEEEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHcC--CCCCCccEEEEEEE
Confidence 46999999 999999999999877 4 4677764
No 362
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=95.96 E-value=0.027 Score=51.87 Aligned_cols=33 Identities=24% Similarity=0.424 Sum_probs=29.9
Q ss_pred CceEEEEc-CChhHHHHHHHHHHcCCCCeEEEEeCC
Q 017997 1 MVKICCIG-AGYVGGPTMAVIALKCPSIEVAVVDIS 35 (362)
Q Consensus 1 ~mkI~VIG-lG~~G~~lA~~la~~~~G~~V~~~d~~ 35 (362)
||+|.|.| .|++|..++..|++. |++|+++|++
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~--g~~V~~~~r~ 34 (347)
T 1orr_A 1 MAKLLITGGCGFLGSNLASFALSQ--GIDLIVFDNL 34 (347)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECC
T ss_pred CcEEEEeCCCchhHHHHHHHHHhC--CCEEEEEeCC
Confidence 78999999 699999999999998 9999999974
No 363
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=95.96 E-value=0.088 Score=47.95 Aligned_cols=97 Identities=13% Similarity=0.093 Sum_probs=62.4
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEE-ecCHHhh-hcCC
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFF-STDVEKH-VSEA 79 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~-t~d~~~a-~~~a 79 (362)
++|..||+|..|.+ +..+++. +|.+|+++|++++.++..++. .++....++++ ..|..+. -...
T Consensus 124 ~rVLDIGcG~G~~t-a~~lA~~-~ga~V~gIDis~~~l~~Ar~~------------~~~~gl~~v~~v~gDa~~l~d~~F 189 (298)
T 3fpf_A 124 ERAVFIGGGPLPLT-GILLSHV-YGMRVNVVEIEPDIAELSRKV------------IEGLGVDGVNVITGDETVIDGLEF 189 (298)
T ss_dssp CEEEEECCCSSCHH-HHHHHHT-TCCEEEEEESSHHHHHHHHHH------------HHHHTCCSEEEEESCGGGGGGCCC
T ss_pred CEEEEECCCccHHH-HHHHHHc-cCCEEEEEECCHHHHHHHHHH------------HHhcCCCCeEEEECchhhCCCCCc
Confidence 58999999987653 3334553 388999999999999876642 11100124444 2333331 2468
Q ss_pred cEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEee
Q 017997 80 DIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKS 127 (362)
Q Consensus 80 DvVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~S 127 (362)
|+|+++...+ | ...+++.+.+.+++|..++...
T Consensus 190 DvV~~~a~~~------------d---~~~~l~el~r~LkPGG~Lvv~~ 222 (298)
T 3fpf_A 190 DVLMVAALAE------------P---KRRVFRNIHRYVDTETRIIYRT 222 (298)
T ss_dssp SEEEECTTCS------------C---HHHHHHHHHHHCCTTCEEEEEE
T ss_pred CEEEECCCcc------------C---HHHHHHHHHHHcCCCcEEEEEc
Confidence 9999864311 1 2678889999999988776544
No 364
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=95.96 E-value=0.022 Score=53.38 Aligned_cols=35 Identities=26% Similarity=0.407 Sum_probs=32.2
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHH
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSR 38 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~ 38 (362)
.+|+|+|.|.+|..+|..+... |.+|+++|+++++
T Consensus 176 ktV~I~G~GnVG~~~A~~l~~~--GakVvvsD~~~~~ 210 (355)
T 1c1d_A 176 LTVLVQGLGAVGGSLASLAAEA--GAQLLVADTDTER 210 (355)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHC--CCEEEEEeCCccH
Confidence 4799999999999999999988 9999999999775
No 365
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=95.95 E-value=0.028 Score=51.68 Aligned_cols=74 Identities=18% Similarity=0.225 Sum_probs=51.8
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCC-eEEEEeCC---HHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEe--cCH---
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSI-EVAVVDIS---VSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFS--TDV--- 72 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~-~V~~~d~~---~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t--~d~--- 72 (362)
.++.|+|+|.+|.+++..|++. |. +|++++|+ .++.+++.+. + .......+... .+.
T Consensus 149 k~~lVlGAGGaaraia~~L~~~--G~~~v~v~nRt~~~~~~a~~la~~-----------~-~~~~~~~v~~~~~~~l~~~ 214 (312)
T 3t4e_A 149 KTMVLLGAGGAATAIGAQAAIE--GIKEIKLFNRKDDFFEKAVAFAKR-----------V-NENTDCVVTVTDLADQHAF 214 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCSEEEEEECSSTHHHHHHHHHHH-----------H-HHHSSCEEEEEETTCHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHc--CCCEEEEEECCCchHHHHHHHHHH-----------h-hhccCcceEEechHhhhhh
Confidence 4789999999999999999998 87 89999999 8887776541 0 00001112222 232
Q ss_pred HhhhcCCcEEEEeccCC
Q 017997 73 EKHVSEADIVFVSVNTP 89 (362)
Q Consensus 73 ~~a~~~aDvVii~vptp 89 (362)
.+.+.++|+||-|+|..
T Consensus 215 ~~~l~~~DiIINaTp~G 231 (312)
T 3t4e_A 215 TEALASADILTNGTKVG 231 (312)
T ss_dssp HHHHHHCSEEEECSSTT
T ss_pred HhhccCceEEEECCcCC
Confidence 34578899999997754
No 366
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=95.94 E-value=0.0057 Score=53.11 Aligned_cols=32 Identities=25% Similarity=0.329 Sum_probs=30.1
Q ss_pred eEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCH
Q 017997 3 KICCIGAGYVGGPTMAVIALKCPSIEVAVVDISV 36 (362)
Q Consensus 3 kI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~ 36 (362)
.|+|||+|..|++.|..|+++ |++|+++|.++
T Consensus 4 dV~IIGaGpaGL~aA~~La~~--G~~V~v~Ek~~ 35 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAA--GHQVHLFDKSR 35 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHT--TCCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHC--CCCEEEEECCC
Confidence 599999999999999999999 99999999864
No 367
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=95.89 E-value=0.0079 Score=54.52 Aligned_cols=72 Identities=15% Similarity=0.160 Sum_probs=48.2
Q ss_pred ceEEEEcC-ChhHHHHHHHHHHcCCC-CeEEEEeCCHHHH--HHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhc
Q 017997 2 VKICCIGA-GYVGGPTMAVIALKCPS-IEVAVVDISVSRI--NAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS 77 (362)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~la~~~~G-~~V~~~d~~~~~~--~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~ 77 (362)
|+|.|.|+ |.+|..++..|++. | ++|++++|++++. +.+......+.. +.+.-.+++.++++
T Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~--g~~~V~~~~R~~~~~~~~~l~~~~~~~~~------------~D~~d~~~l~~~~~ 71 (299)
T 2wm3_A 6 KLVVVFGGTGAQGGSVARTLLED--GTFKVRVVTRNPRKKAAKELRLQGAEVVQ------------GDQDDQVIMELALN 71 (299)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH--CSSEEEEEESCTTSHHHHHHHHTTCEEEE------------CCTTCHHHHHHHHT
T ss_pred CEEEEECCCchHHHHHHHHHHhc--CCceEEEEEcCCCCHHHHHHHHCCCEEEE------------ecCCCHHHHHHHHh
Confidence 58999997 99999999999998 7 9999999987653 233221111100 01111122445678
Q ss_pred CCcEEEEecc
Q 017997 78 EADIVFVSVN 87 (362)
Q Consensus 78 ~aDvVii~vp 87 (362)
++|+||.+.+
T Consensus 72 ~~d~vi~~a~ 81 (299)
T 2wm3_A 72 GAYATFIVTN 81 (299)
T ss_dssp TCSEEEECCC
T ss_pred cCCEEEEeCC
Confidence 9999999864
No 368
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=95.87 E-value=0.011 Score=55.35 Aligned_cols=32 Identities=16% Similarity=0.221 Sum_probs=26.5
Q ss_pred CceEEEEcCChhHHHHHHHHHHcCCCCeEEEEe
Q 017997 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVD 33 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d 33 (362)
|+||+|+|.|++|.-+.+.|.++ |..+|+.+.
T Consensus 17 ~ikVgI~G~G~iGr~llR~l~~~-p~veivain 48 (354)
T 3cps_A 17 QGTLGINGFGRIGRLVLRACMER-NDITVVAIN 48 (354)
T ss_dssp -CEEEEECCSHHHHHHHHHHHTC-SSCEEEEEE
T ss_pred ceEEEEECCCHHHHHHHHHHHcC-CCeEEEEec
Confidence 46999999999999999988875 567877775
No 369
>3h2z_A Mannitol-1-phosphate 5-dehydrogenase; PSI- protein structure initiative, structural genomics, midwest for structural genomics (MCSG); 1.90A {Shigella flexneri 2a str}
Probab=95.86 E-value=0.012 Score=55.62 Aligned_cols=82 Identities=21% Similarity=0.274 Sum_probs=53.3
Q ss_pred ceEEEEcCChhHH-HHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCC-CCCCCChHHHHhhhcCCCEEEe-c---CHHhh
Q 017997 2 VKICCIGAGYVGG-PTMAVIALKCPSIEVAVVDISVSRINAWNSDQL-PIYEPGLDGVVKQCRGKNLFFS-T---DVEKH 75 (362)
Q Consensus 2 mkI~VIGlG~~G~-~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~-~~~e~~l~~~~~~~~~~~l~~t-~---d~~~a 75 (362)
||+..+|+|.+|. -++..|.+. |++|+..|+|+..+++|++.+. .+...+.+.....+ .+++.. + +.-++
T Consensus 1 mkavhfGaGniGRGfig~~l~~~--g~~v~f~dv~~~~i~~Ln~~~~Y~V~~~g~~~~~~~v--~~v~ai~s~~~~~~~~ 76 (382)
T 3h2z_A 1 MKALHFGAGNIGRGFIGKLLADA--GIQLTFADVNQVVLDALNARHSYQVHVVGETEQVDTV--SGVNAVSSIGDDVVDL 76 (382)
T ss_dssp CEEEEECCSHHHHHTHHHHHHHT--TCEEEEEESCHHHHHHHHHHSEEEEEEESSSEEEEEE--ESCEEEETTSSHHHHH
T ss_pred CcEEEECCCccchhhHHHHHHHc--CCeEEEEeCCHHHHHHHhcCCCEEEEEccCCcceEEE--EEEEEEeCcHHHHHHH
Confidence 8999999999995 455666677 9999999999999999997432 22222221111100 122221 1 23335
Q ss_pred hcCCcEEEEecc
Q 017997 76 VSEADIVFVSVN 87 (362)
Q Consensus 76 ~~~aDvVii~vp 87 (362)
+.++|+|..+++
T Consensus 77 i~~adlitT~vG 88 (382)
T 3h2z_A 77 IAQVDLVTTAVG 88 (382)
T ss_dssp HTTCSEEEECCC
T ss_pred HcCCCEEEECCC
Confidence 789999988876
No 370
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=95.85 E-value=0.0058 Score=56.87 Aligned_cols=79 Identities=19% Similarity=0.193 Sum_probs=45.2
Q ss_pred ceEEEEcCChhHHHHHHHHHHcC------CCCeEE-EEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCE-EEec---
Q 017997 2 VKICCIGAGYVGGPTMAVIALKC------PSIEVA-VVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNL-FFST--- 70 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~------~G~~V~-~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l-~~t~--- 70 (362)
+||+|||+|.||..++..+.+.. .+.+|+ ++|+++++.+.. ..+++.......+.+ .+++
T Consensus 7 irvgIiG~G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~ 77 (331)
T 3c8m_A 7 INLSIFGLGNVGLNLLRIIRSFNEENRLGLKFNVVFVADSLHSYYNER---------IDIGKVISYKEKGSLDSLEYESI 77 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCSSSEEEEEEEEECSSCEEECTT---------CCHHHHHHHHHTTCGGGCCSEEC
T ss_pred EeEEEEecCHHHHHHHHHHHhChHHHhcCCcEEEEEEEECChHHhhcc---------cChHHHhhhhccCCcccccCCCC
Confidence 58999999999999999987641 024554 457775443210 001111110001112 1334
Q ss_pred CHHhhh-cCCcEEEEeccCC
Q 017997 71 DVEKHV-SEADIVFVSVNTP 89 (362)
Q Consensus 71 d~~~a~-~~aDvVii~vptp 89 (362)
|+++.+ .+.|+|++|+|+.
T Consensus 78 d~~~ll~~~iDvVv~~t~~~ 97 (331)
T 3c8m_A 78 SASEALARDFDIVVDATPAS 97 (331)
T ss_dssp CHHHHHHSSCSEEEECSCCC
T ss_pred CHHHHhCCCCCEEEECCCCC
Confidence 777755 4689999998753
No 371
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=95.78 E-value=0.023 Score=51.59 Aligned_cols=35 Identities=29% Similarity=0.434 Sum_probs=32.0
Q ss_pred ceEEEEcC-ChhHHHHHHHHHHcCCCCeEEEEeCCHHH
Q 017997 2 VKICCIGA-GYVGGPTMAVIALKCPSIEVAVVDISVSR 38 (362)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~la~~~~G~~V~~~d~~~~~ 38 (362)
|||.|.|+ |++|..++..|++. |++|++++++++.
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~ 36 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVEL--GYEVVVVDNLSSG 36 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEECCCSSC
T ss_pred CEEEEECCCChHHHHHHHHHHhC--CCEEEEEeCCCCC
Confidence 79999997 99999999999999 9999999987654
No 372
>1p3d_A UDP-N-acetylmuramate--alanine ligase; alpha/beta protein; HET: UMA ANP; 1.70A {Haemophilus influenzae} SCOP: c.5.1.1 c.59.1.1 c.72.2.1 PDB: 1gqq_A* 1p31_A* 1gqy_A*
Probab=95.75 E-value=0.078 Score=51.66 Aligned_cols=119 Identities=18% Similarity=0.215 Sum_probs=66.2
Q ss_pred ceEEEEcCChhHHH-HHHHHHHcCCCCeEEEEeCCHHH-HHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCC
Q 017997 2 VKICCIGAGYVGGP-TMAVIALKCPSIEVAVVDISVSR-INAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEA 79 (362)
Q Consensus 2 mkI~VIGlG~~G~~-lA~~la~~~~G~~V~~~d~~~~~-~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~a 79 (362)
++|.|||+|..|.+ +|..|.+. |++|+++|..... .+.+.+.... +..-.+.. .++++
T Consensus 19 ~~i~viG~G~sG~s~~A~~l~~~--G~~V~~~D~~~~~~~~~l~~~gi~-----------------~~~g~~~~-~~~~a 78 (475)
T 1p3d_A 19 QQIHFIGIGGAGMSGIAEILLNE--GYQISGSDIADGVVTQRLAQAGAK-----------------IYIGHAEE-HIEGA 78 (475)
T ss_dssp CEEEEETTTSTTHHHHHHHHHHH--TCEEEEEESCCSHHHHHHHHTTCE-----------------EEESCCGG-GGTTC
T ss_pred CEEEEEeecHHHHHHHHHHHHhC--CCEEEEECCCCCHHHHHHHhCCCE-----------------EECCCCHH-HcCCC
Confidence 58999999999997 99999998 9999999986432 2333321111 11112333 36789
Q ss_pred cEEEEeccCCCCCCCCC---CCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHH-HHHHHHHhc
Q 017997 80 DIVFVSVNTPTKTQGLG---AGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAE-AIEKILTHN 144 (362)
Q Consensus 80 DvVii~vptp~~~~g~~---~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~-~l~~~l~~~ 144 (362)
|+||+.-.-|.+..-.. +...+-++ ..+.+...++...+|-++.|..=+||. .+..+|.+.
T Consensus 79 ~~vv~s~~i~~~~~~~~~a~~~~i~vl~----~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~ 143 (475)
T 1p3d_A 79 SVVVVSSAIKDDNPELVTSKQKRIPVIQ----RAQMLAEIMRFRHGIAVAGTHGKTTTTAMISMIYTQA 143 (475)
T ss_dssp SEEEECTTSCTTCHHHHHHHHTTCCEEE----HHHHHHHHHHTSEEEEEESSSCHHHHHHHHHHHHHHT
T ss_pred CEEEECCCCCCCCHHHHHHHHcCCcEEE----HHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHhC
Confidence 98888733221100000 00001111 112233333334677777887666665 456777654
No 373
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=95.73 E-value=0.0041 Score=58.70 Aligned_cols=36 Identities=19% Similarity=0.246 Sum_probs=32.4
Q ss_pred CceEEEEcC-ChhHHHHHHHHHHcCCCCeEEEEeCCHHH
Q 017997 1 MVKICCIGA-GYVGGPTMAVIALKCPSIEVAVVDISVSR 38 (362)
Q Consensus 1 ~mkI~VIGl-G~~G~~lA~~la~~~~G~~V~~~d~~~~~ 38 (362)
||+|.|.|. |++|..++..|++. |++|+++++++..
T Consensus 29 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~ 65 (379)
T 2c5a_A 29 NLKISITGAGGFIASHIARRLKHE--GHYVIASDWKKNE 65 (379)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCCS
T ss_pred CCeEEEECCccHHHHHHHHHHHHC--CCeEEEEECCCcc
Confidence 579999997 99999999999999 9999999997543
No 374
>2f00_A UDP-N-acetylmuramate--L-alanine ligase; amide bond ligase, ATPase, bacterial cell WALL; 2.50A {Escherichia coli}
Probab=95.72 E-value=0.099 Score=51.15 Aligned_cols=115 Identities=17% Similarity=0.209 Sum_probs=66.8
Q ss_pred ceEEEEcCChhHHH-HHHHHHHcCCCCeEEEEeCCHHH-HHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCC
Q 017997 2 VKICCIGAGYVGGP-TMAVIALKCPSIEVAVVDISVSR-INAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEA 79 (362)
Q Consensus 2 mkI~VIGlG~~G~~-lA~~la~~~~G~~V~~~d~~~~~-~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~a 79 (362)
++|.|||+|..|.+ +|..|.+. |++|+++|..... .+.+.+.... +..-.+.+ .++++
T Consensus 20 ~~v~viGiG~sG~s~~A~~l~~~--G~~V~~~D~~~~~~~~~l~~~gi~-----------------~~~g~~~~-~~~~a 79 (491)
T 2f00_A 20 RHIHFVGIGGAGMGGIAEVLANE--GYQISGSDLAPNPVTQQLMNLGAT-----------------IYFNHRPE-NVRDA 79 (491)
T ss_dssp CEEEEETTTSTTHHHHHHHHHHT--TCEEEEECSSCCHHHHHHHHTTCE-----------------EESSCCGG-GGTTC
T ss_pred CEEEEEEcCHHHHHHHHHHHHhC--CCeEEEECCCCCHHHHHHHHCCCE-----------------EECCCCHH-HcCCC
Confidence 68999999999997 99999998 9999999986432 2334332111 11112233 36789
Q ss_pred cEEEEeccCCCCCCCCCCCCCCChHH-------HHHHHHHHHhhcCCCCEEEEeeCCccccHH-HHHHHHHhc
Q 017997 80 DIVFVSVNTPTKTQGLGAGKAADLTY-------WESAARVIADVSKSDKIVVEKSTVPVKTAE-AIEKILTHN 144 (362)
Q Consensus 80 DvVii~vptp~~~~g~~~~~~~d~~~-------l~~~~~~i~~~l~~~~iVv~~STv~~gt~~-~l~~~l~~~ 144 (362)
|+||+.-.-|.+ .+.+.. +....+.+...++...+|-++.|..=+||. .+..+|.+.
T Consensus 80 ~~vv~s~~i~~~--------~p~~~~a~~~~ipvl~~~~~l~~~~~~~~vI~VTGTnGKTTTt~ml~~iL~~~ 144 (491)
T 2f00_A 80 SVVVVSSAISAD--------NPEIVAAHEARIPVIRRAEMLAELMRFRHGIAIAGTHGKTTTTAMVSSIYAEA 144 (491)
T ss_dssp SEEEECTTCCTT--------CHHHHHHHHTTCCEEEHHHHHHHHHTTSEEEEEESSSCHHHHHHHHHHHHHHT
T ss_pred CEEEECCCCCCC--------CHHHHHHHHcCCcEEEHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHHHHhC
Confidence 998887332211 110000 011122333444444677777887666665 456777654
No 375
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=95.72 E-value=0.082 Score=49.26 Aligned_cols=36 Identities=22% Similarity=0.256 Sum_probs=32.3
Q ss_pred ceEEEEc-CChhHHHHHHHHHHcCCCCeEEEEeCCHHHH
Q 017997 2 VKICCIG-AGYVGGPTMAVIALKCPSIEVAVVDISVSRI 39 (362)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~la~~~~G~~V~~~d~~~~~~ 39 (362)
|+|.|.| .|.+|..++..|++. |++|++++|++++.
T Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~ 42 (352)
T 1xgk_A 6 KTIAVVGATGRQGASLIRVAAAV--GHHVRAQVHSLKGL 42 (352)
T ss_dssp CCEEEESTTSHHHHHHHHHHHHT--TCCEEEEESCSCSH
T ss_pred CEEEEECCCCHHHHHHHHHHHhC--CCEEEEEECCCChh
Confidence 6799999 599999999999998 99999999987654
No 376
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=95.72 E-value=0.0087 Score=55.47 Aligned_cols=40 Identities=15% Similarity=0.151 Sum_probs=33.5
Q ss_pred ceEEEEc-CChhHHHHHHHHHHcCCCCeEEEEeCC----HHHHHHHH
Q 017997 2 VKICCIG-AGYVGGPTMAVIALKCPSIEVAVVDIS----VSRINAWN 43 (362)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~la~~~~G~~V~~~d~~----~~~~~~l~ 43 (362)
|+|.|.| .|++|..++..|.+. |++|++++++ .+.++.+.
T Consensus 26 ~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~ 70 (351)
T 3ruf_A 26 KTWLITGVAGFIGSNLLEKLLKL--NQVVIGLDNFSTGHQYNLDEVK 70 (351)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCHHHHHHHH
T ss_pred CeEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCCCCchhhhhhhh
Confidence 7899999 599999999999999 9999999994 34444443
No 377
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=95.70 E-value=0.014 Score=54.94 Aligned_cols=94 Identities=15% Similarity=0.173 Sum_probs=59.9
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCC-eEEEEeCC----HHH----HHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCH
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSI-EVAVVDIS----VSR----INAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDV 72 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~-~V~~~d~~----~~~----~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~ 72 (362)
.||.|+|+|.+|..+|..|... |. +|+++|++ .++ ++.+++ .+.++ . .......++
T Consensus 193 ~kVVv~GAGaAG~~iAkll~~~--G~~~I~v~Dr~Gli~~~R~~~~L~~~k~-----------~~A~~-~-~~~~~~~~L 257 (388)
T 1vl6_A 193 VKVVVNGIGAAGYNIVKFLLDL--GVKNVVAVDRKGILNENDPETCLNEYHL-----------EIARI-T-NPERLSGDL 257 (388)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCCEEEEEETTEECCTTSGGGCSSHHHH-----------HHHHT-S-CTTCCCSCH
T ss_pred cEEEEECCCHHHHHHHHHHHhC--CCCeEEEEECCCcccCCCcccccCHHHH-----------HHHHh-h-hccCchhhH
Confidence 4899999999999999999998 77 89999997 433 111110 11111 0 011123568
Q ss_pred HhhhcCCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeC
Q 017997 73 EKHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKST 128 (362)
Q Consensus 73 ~~a~~~aDvVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~ST 128 (362)
.++++++|++|=+.. |.-. . ++ +.+.+.++.+|+..|.
T Consensus 258 ~eav~~ADVlIG~Sa-p~l~---------t----~e----mVk~Ma~~pIIfalSN 295 (388)
T 1vl6_A 258 ETALEGADFFIGVSR-GNIL---------K----PE----WIKKMSRKPVIFALAN 295 (388)
T ss_dssp HHHHTTCSEEEECSC-SSCS---------C----HH----HHTTSCSSCEEEECCS
T ss_pred HHHHccCCEEEEeCC-CCcc---------C----HH----HHHhcCCCCEEEEcCC
Confidence 899999999888754 4211 1 33 3333556778877665
No 378
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=95.70 E-value=0.14 Score=42.00 Aligned_cols=113 Identities=13% Similarity=0.175 Sum_probs=66.4
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhh----c
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHV----S 77 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~----~ 77 (362)
++|.-+|+|. |. ++..+++..++.+|+++|++++.++..++... +.++ ..++.+..|..+.+ .
T Consensus 27 ~~vldiG~G~-G~-~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~---~~~~--------~~~~~~~~d~~~~~~~~~~ 93 (178)
T 3hm2_A 27 ETLWDIGGGS-GS-IAIEWLRSTPQTTAVCFEISEERRERILSNAI---NLGV--------SDRIAVQQGAPRAFDDVPD 93 (178)
T ss_dssp EEEEEESTTT-TH-HHHHHHTTSSSEEEEEECSCHHHHHHHHHHHH---TTTC--------TTSEEEECCTTGGGGGCCS
T ss_pred CeEEEeCCCC-CH-HHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHH---HhCC--------CCCEEEecchHhhhhccCC
Confidence 3788999997 54 55566665557899999999998887664210 0000 11233333332222 5
Q ss_pred CCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhc
Q 017997 78 EADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHN 144 (362)
Q Consensus 78 ~aDvVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~ 144 (362)
..|+|++.-+... ...++.+.+.++++..++... ........+...+++.
T Consensus 94 ~~D~i~~~~~~~~----------------~~~l~~~~~~L~~gG~l~~~~-~~~~~~~~~~~~~~~~ 143 (178)
T 3hm2_A 94 NPDVIFIGGGLTA----------------PGVFAAAWKRLPVGGRLVANA-VTVESEQMLWALRKQF 143 (178)
T ss_dssp CCSEEEECC-TTC----------------TTHHHHHHHTCCTTCEEEEEE-CSHHHHHHHHHHHHHH
T ss_pred CCCEEEECCcccH----------------HHHHHHHHHhcCCCCEEEEEe-eccccHHHHHHHHHHc
Confidence 6899987643211 346777888899888776533 3333444455555544
No 379
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=95.69 E-value=0.017 Score=53.32 Aligned_cols=66 Identities=17% Similarity=0.091 Sum_probs=45.4
Q ss_pred ceEEEEcC-ChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCc
Q 017997 2 VKICCIGA-GYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (362)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (362)
|+|.|.|+ |++|..++..|++. |++|++++++++. .+ ..+.. +.+.-..+..++++++|
T Consensus 20 ~~vlVtGatG~iG~~l~~~L~~~--G~~V~~~~r~~~~-----~~-~~~~~------------~Dl~d~~~~~~~~~~~d 79 (347)
T 4id9_A 20 HMILVTGSAGRVGRAVVAALRTQ--GRTVRGFDLRPSG-----TG-GEEVV------------GSLEDGQALSDAIMGVS 79 (347)
T ss_dssp -CEEEETTTSHHHHHHHHHHHHT--TCCEEEEESSCCS-----SC-CSEEE------------SCTTCHHHHHHHHTTCS
T ss_pred CEEEEECCCChHHHHHHHHHHhC--CCEEEEEeCCCCC-----CC-ccEEe------------cCcCCHHHHHHHHhCCC
Confidence 78999997 99999999999999 9999999998643 11 11100 11111122445678999
Q ss_pred EEEEecc
Q 017997 81 IVFVSVN 87 (362)
Q Consensus 81 vVii~vp 87 (362)
+||-+..
T Consensus 80 ~vih~A~ 86 (347)
T 4id9_A 80 AVLHLGA 86 (347)
T ss_dssp EEEECCC
T ss_pred EEEECCc
Confidence 9998864
No 380
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=95.68 E-value=0.0092 Score=49.74 Aligned_cols=34 Identities=24% Similarity=0.308 Sum_probs=31.7
Q ss_pred CceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCH
Q 017997 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISV 36 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~ 36 (362)
|++|.|||.|..|+.+|..|++. |.+|+++++++
T Consensus 1 ~~~vvIIGgG~~Gl~~A~~l~~~--g~~v~lie~~~ 34 (180)
T 2ywl_A 1 MWDVIVVGGGPSGLSAALFLARA--GLKVLVLDGGR 34 (180)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT--TCCEEEEECSC
T ss_pred CCeEEEECCCHHHHHHHHHHHHC--CCcEEEEeCCC
Confidence 57999999999999999999999 99999999875
No 381
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=95.65 E-value=0.0095 Score=56.10 Aligned_cols=30 Identities=13% Similarity=0.437 Sum_probs=24.1
Q ss_pred ceEEEEc-CChhHHHHHHHHHHcCCCC---eEEEEe
Q 017997 2 VKICCIG-AGYVGGPTMAVIALKCPSI---EVAVVD 33 (362)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~la~~~~G~---~V~~~d 33 (362)
|||+||| .||+|.-+...|.++ +| ++..+.
T Consensus 3 ~kVaIvGATG~vG~eLlrlL~~~--~~p~~el~~~a 36 (366)
T 3pwk_A 3 YTVAVVGATGAVGAQMIKMLEES--TLPIDKIRYLA 36 (366)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTC--CCCEEEEEEEE
T ss_pred cEEEEECCCChHHHHHHHHHhcC--CCCcEEEEEEE
Confidence 6999999 799999999988886 45 445554
No 382
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*
Probab=95.63 E-value=0.024 Score=52.59 Aligned_cols=41 Identities=15% Similarity=0.302 Sum_probs=30.9
Q ss_pred CceEEEEcCChhHHHHHHHHHHcCCCCeEEEEe-C-CHHHHHHH
Q 017997 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVD-I-SVSRINAW 42 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d-~-~~~~~~~l 42 (362)
|+||+|+|.|++|.-+.+.+.++ |..+|+++. + +++.+..+
T Consensus 1 ~ikVgI~G~G~iG~~l~R~l~~~-~~veiv~i~~~~~~~~~a~l 43 (330)
T 1gad_O 1 TIKVGINGFGRIGRIVFRAAQKR-SDIEIVAINDLLDADYMAYM 43 (330)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTC-SSEEEEEEECSSCHHHHHHH
T ss_pred CeEEEEECcCHHHHHHHHHHHcC-CCeEEEEEcCCCChhHHhHh
Confidence 57999999999999999888876 466777664 3 45554443
No 383
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=95.61 E-value=0.0059 Score=53.42 Aligned_cols=73 Identities=12% Similarity=0.127 Sum_probs=47.1
Q ss_pred ceEEEEc-CChhHHHHHHHHHHcCCCC--eEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcC
Q 017997 2 VKICCIG-AGYVGGPTMAVIALKCPSI--EVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSE 78 (362)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~la~~~~G~--~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~ 78 (362)
|+|.|.| .|.+|..++..|++. |+ +|+++++++++.+.+........ ...+.-..+..+++++
T Consensus 19 ~~vlVtGasg~iG~~l~~~L~~~--G~~~~V~~~~r~~~~~~~~~~~~~~~~------------~~D~~d~~~~~~~~~~ 84 (242)
T 2bka_A 19 KSVFILGASGETGRVLLKEILEQ--GLFSKVTLIGRRKLTFDEEAYKNVNQE------------VVDFEKLDDYASAFQG 84 (242)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHH--TCCSEEEEEESSCCCCCSGGGGGCEEE------------ECCGGGGGGGGGGGSS
T ss_pred CeEEEECCCcHHHHHHHHHHHcC--CCCCEEEEEEcCCCCccccccCCceEE------------ecCcCCHHHHHHHhcC
Confidence 5799998 699999999999999 89 99999998654322111000000 0011111234455678
Q ss_pred CcEEEEeccC
Q 017997 79 ADIVFVSVNT 88 (362)
Q Consensus 79 aDvVii~vpt 88 (362)
+|+||-|...
T Consensus 85 ~d~vi~~ag~ 94 (242)
T 2bka_A 85 HDVGFCCLGT 94 (242)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCc
Confidence 9999999764
No 384
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=95.61 E-value=0.019 Score=53.16 Aligned_cols=35 Identities=31% Similarity=0.421 Sum_probs=26.6
Q ss_pred ceEEEEcCChhHHHHHHHHHHc-----CCCCeEEEE-eCCH
Q 017997 2 VKICCIGAGYVGGPTMAVIALK-----CPSIEVAVV-DISV 36 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~-----~~G~~V~~~-d~~~ 36 (362)
+||+|+|+|.||..++..|.++ +++.+|+++ |+++
T Consensus 5 irVgIiG~G~VG~~~~~~L~~~~~~~~g~~l~lvaVad~~~ 45 (325)
T 3ing_A 5 IRIILMGTGNVGLNVLRIIDASNRRRSAFSIKVVGVSDSRS 45 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHC--CEEEEEEEECSSB
T ss_pred EEEEEEcCcHHHHHHHHHHHhchhhccCCCEEEEEEEecCh
Confidence 4899999999999999999863 135666655 6654
No 385
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=95.57 E-value=0.018 Score=57.47 Aligned_cols=39 Identities=23% Similarity=0.271 Sum_probs=35.3
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHH
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAW 42 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l 42 (362)
++|.|+|+|.+|..+|..|.+. |++|+++|.|+++++.+
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~--g~~v~vid~d~~~~~~~ 387 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRK--PVPFILIDRQESPVCND 387 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT--TCCEEEEESSCCSSCCS
T ss_pred CCEEEECCCHHHHHHHHHHHHC--CCCEEEEECChHHHhhc
Confidence 4789999999999999999999 99999999999876544
No 386
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=95.56 E-value=0.027 Score=52.31 Aligned_cols=42 Identities=21% Similarity=0.378 Sum_probs=31.6
Q ss_pred ceEEEEcCChhHHHHHHHHHHcC-CCCeEEEE-eC-CHHHHHHHH
Q 017997 2 VKICCIGAGYVGGPTMAVIALKC-PSIEVAVV-DI-SVSRINAWN 43 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~-~G~~V~~~-d~-~~~~~~~l~ 43 (362)
+||+|+|.|++|.-+.+.|.++. |..+|+.+ |+ +++....+-
T Consensus 1 ~kVgI~G~G~iGr~llR~l~~~~~p~~eivain~~~~~~~~~~ll 45 (332)
T 1hdg_O 1 ARVAINGFGRIGRLVYRIIYERKNPDIEVVAINDLTDTKTLAHLL 45 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCTTCEEEEEECSSCHHHHHHHH
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCCCeEEEEEEcCCChHHhhhhc
Confidence 48999999999999999888763 46888866 43 555555443
No 387
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=95.55 E-value=0.0085 Score=55.48 Aligned_cols=34 Identities=26% Similarity=0.372 Sum_probs=31.3
Q ss_pred CceEEEEcCChhHHHHHHHHHH---cCCCCeEEEEeCCH
Q 017997 1 MVKICCIGAGYVGGPTMAVIAL---KCPSIEVAVVDISV 36 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~la~---~~~G~~V~~~d~~~ 36 (362)
|++|.|||.|..|+.+|..|++ . |++|+++|+++
T Consensus 1 m~dV~IIGaG~aGl~~A~~L~~~~~~--G~~V~v~Ek~~ 37 (342)
T 3qj4_A 1 MAQVLIVGAGMTGSLCAALLRRQTSG--PLYLAVWDKAD 37 (342)
T ss_dssp CEEEEEECCSHHHHHHHHHHHSCC-C--CEEEEEECSSS
T ss_pred CCcEEEECCcHHHHHHHHHHHhhccC--CceEEEEECCC
Confidence 6789999999999999999999 7 99999999763
No 388
>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*
Probab=95.51 E-value=0.081 Score=49.20 Aligned_cols=41 Identities=15% Similarity=0.317 Sum_probs=31.3
Q ss_pred ceEEEEcCChhHHHHHHHHHH---cCCCCeEEEEe-C-CHHHHHHHH
Q 017997 2 VKICCIGAGYVGGPTMAVIAL---KCPSIEVAVVD-I-SVSRINAWN 43 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~---~~~G~~V~~~d-~-~~~~~~~l~ 43 (362)
+||+|+|.|++|..+.+.|.+ + |..+|+++. + +++....+-
T Consensus 3 ikVgI~G~G~iGr~l~r~l~~~~~~-~~~eivai~~~~~~~~~~~ll 48 (339)
T 2x5j_O 3 VRVAINGFGRIGRNVVRALYESGRR-AEITVVAINELADAAGMAHLL 48 (339)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTSGG-GTEEEEEEECSSCHHHHHHHH
T ss_pred eEEEEECcCHHHHHHHHHHHcCCCC-CCEEEEEEeCCCCHHHHHHHh
Confidence 699999999999999999887 4 367877664 3 556555544
No 389
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=95.47 E-value=0.0085 Score=58.52 Aligned_cols=34 Identities=24% Similarity=0.280 Sum_probs=31.6
Q ss_pred CceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCH
Q 017997 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISV 36 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~ 36 (362)
|++|.|||.|.-|++.|..|+++ |++|++++.+.
T Consensus 1 Mk~VvVIGaG~~GL~aA~~La~~--G~~V~VlEa~~ 34 (501)
T 4dgk_A 1 MKPTTVIGAGFGGLALAIRLQAA--GIPVLLLEQRD 34 (501)
T ss_dssp CCCEEEECCHHHHHHHHHHHHHT--TCCEEEECCC-
T ss_pred CCCEEEECCcHHHHHHHHHHHHC--CCcEEEEccCC
Confidence 78999999999999999999999 99999999865
No 390
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=95.47 E-value=0.0041 Score=58.29 Aligned_cols=41 Identities=22% Similarity=0.329 Sum_probs=34.4
Q ss_pred CceEEEEc-CChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHH
Q 017997 1 MVKICCIG-AGYVGGPTMAVIALKCPSIEVAVVDISVSRINAW 42 (362)
Q Consensus 1 ~mkI~VIG-lG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l 42 (362)
||+|.|.| .|++|..++..|++.. |++|++++++++..+.+
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~~-g~~V~~~~r~~~~~~~~ 65 (372)
T 3slg_A 24 AKKVLILGVNGFIGHHLSKRILETT-DWEVFGMDMQTDRLGDL 65 (372)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHHS-SCEEEEEESCCTTTGGG
T ss_pred CCEEEEECCCChHHHHHHHHHHhCC-CCEEEEEeCChhhhhhh
Confidence 47999999 6999999999999862 79999999987655444
No 391
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=95.47 E-value=0.29 Score=41.28 Aligned_cols=113 Identities=15% Similarity=0.183 Sum_probs=69.5
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEE-ecCHHhh---hc
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFF-STDVEKH---VS 77 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~-t~d~~~a---~~ 77 (362)
.+|.-+|+|. |. ++..+++.+++.+|+++|++++.++.+++.. +.....++++ ..|..+. ..
T Consensus 42 ~~vLDiG~G~-G~-~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~------------~~~~~~~v~~~~~d~~~~~~~~~ 107 (204)
T 3e05_A 42 LVMWDIGAGS-AS-VSIEASNLMPNGRIFALERNPQYLGFIRDNL------------KKFVARNVTLVEAFAPEGLDDLP 107 (204)
T ss_dssp CEEEEETCTT-CH-HHHHHHHHCTTSEEEEEECCHHHHHHHHHHH------------HHHTCTTEEEEECCTTTTCTTSC
T ss_pred CEEEEECCCC-CH-HHHHHHHHCCCCEEEEEeCCHHHHHHHHHHH------------HHhCCCcEEEEeCChhhhhhcCC
Confidence 3688899996 54 5666777744589999999999988776420 0000122332 2232221 25
Q ss_pred CCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhc
Q 017997 78 EADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHN 144 (362)
Q Consensus 78 ~aDvVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~ 144 (362)
..|+|+...+.+ .....++.+.+.++++..++.. +....+.+.+.+.+++.
T Consensus 108 ~~D~i~~~~~~~---------------~~~~~l~~~~~~LkpgG~l~~~-~~~~~~~~~~~~~l~~~ 158 (204)
T 3e05_A 108 DPDRVFIGGSGG---------------MLEEIIDAVDRRLKSEGVIVLN-AVTLDTLTKAVEFLEDH 158 (204)
T ss_dssp CCSEEEESCCTT---------------CHHHHHHHHHHHCCTTCEEEEE-ECBHHHHHHHHHHHHHT
T ss_pred CCCEEEECCCCc---------------CHHHHHHHHHHhcCCCeEEEEE-ecccccHHHHHHHHHHC
Confidence 689998874321 1367788888999988877653 23334445566666654
No 392
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=95.43 E-value=0.03 Score=49.80 Aligned_cols=40 Identities=18% Similarity=0.290 Sum_probs=32.2
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCC-eEEEEeCCHHHHHHHH
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISVSRINAWN 43 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~-~V~~~d~~~~~~~~l~ 43 (362)
.+|.|+|+|.+|..++..|+.. |. +++++|.+.-....++
T Consensus 29 ~~VlvvG~GglG~~va~~La~~--Gvg~i~lvD~d~v~~sNL~ 69 (251)
T 1zud_1 29 SQVLIIGLGGLGTPAALYLAGA--GVGTLVLADDDDVHLSNLQ 69 (251)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT--TCSEEEEECCCBCCGGGTT
T ss_pred CcEEEEccCHHHHHHHHHHHHc--CCCeEEEEeCCCcccccCC
Confidence 4899999999999999999999 65 8999998753333333
No 393
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=95.42 E-value=0.011 Score=55.89 Aligned_cols=30 Identities=23% Similarity=0.461 Sum_probs=24.4
Q ss_pred ceEEEEc-CChhHHHHHHHHHHcCCCCeEEEE
Q 017997 2 VKICCIG-AGYVGGPTMAVIALKCPSIEVAVV 32 (362)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~la~~~~G~~V~~~ 32 (362)
+||+|+| .||+|.-+...|.++ |..++..+
T Consensus 20 ~kVaIvGAtG~vG~ell~lL~~h-p~~el~~l 50 (381)
T 3hsk_A 20 KKAGVLGATGSVGQRFILLLSKH-PEFEIHAL 50 (381)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTC-SSEEEEEE
T ss_pred cEEEEECCCChHHHHHHHHHHcC-CCceEEEe
Confidence 5899999 699999999988876 45677544
No 394
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=95.38 E-value=0.031 Score=53.99 Aligned_cols=113 Identities=16% Similarity=0.233 Sum_probs=65.8
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcE
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (362)
+||.|||+|..|.+.|..|++. ||+|+++|..... ++... ++. .-++..-....+.+.++|+
T Consensus 6 ~~v~viG~G~~G~~~a~~l~~~--G~~v~~~D~~~~~-------------~~~~~-l~~--G~~~~~g~~~~~~~~~~d~ 67 (439)
T 2x5o_A 6 KNVVIIGLGLTGLSCVDFFLAR--GVTPRVMDTRMTP-------------PGLDK-LPE--AVERHTGSLNDEWLMAADL 67 (439)
T ss_dssp CCEEEECCHHHHHHHHHHHHTT--TCCCEEEESSSSC-------------TTGGG-SCT--TSCEEESSCCHHHHHTCSE
T ss_pred CEEEEEeecHHHHHHHHHHHhC--CCEEEEEECCCCc-------------chhHH-hhC--CCEEEECCCcHHHhccCCE
Confidence 6899999999999999888888 9999999985421 00000 000 1112212222445678999
Q ss_pred EEEeccCCCCCCCCCCCCCCChHHHHHHH----------HHHHhhcCCCCEEEEeeCCccccHHH-HHHHHHhc
Q 017997 82 VFVSVNTPTKTQGLGAGKAADLTYWESAA----------RVIADVSKSDKIVVEKSTVPVKTAEA-IEKILTHN 144 (362)
Q Consensus 82 Vii~vptp~~~~g~~~~~~~d~~~l~~~~----------~~i~~~l~~~~iVv~~STv~~gt~~~-l~~~l~~~ 144 (362)
||++..-|.+ .| .+..+. +.+...+ +..+|-++.|..=+||.. +..+|.+.
T Consensus 68 vV~s~gi~~~--------~p---~~~~a~~~~~~v~~~~~~~~~~~-~~~vI~VTGTnGKTTT~~ml~~iL~~~ 129 (439)
T 2x5o_A 68 IVASPGIALA--------HP---SLSAAADAGIEIVGDIELFCREA-QAPIVAITGSNGKSTVTTLVGEMAKAA 129 (439)
T ss_dssp EEECTTSCTT--------CH---HHHHHHHTTCEEECHHHHHHHHC-CSCEEEEECSSSHHHHHHHHHHHHHHT
T ss_pred EEeCCCCCCC--------CH---HHHHHHHCCCcEEEHHHHHHHhc-CCCEEEEECCCCHHHHHHHHHHHHHhc
Confidence 9988543321 12 122211 1122233 356787778876666654 56777664
No 395
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=95.36 E-value=0.11 Score=47.53 Aligned_cols=34 Identities=18% Similarity=0.342 Sum_probs=30.9
Q ss_pred ceEEEEc-CChhHHHHHHHHHHcCCCCeEEEEeCCHH
Q 017997 2 VKICCIG-AGYVGGPTMAVIALKCPSIEVAVVDISVS 37 (362)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~la~~~~G~~V~~~d~~~~ 37 (362)
|+|.|.| .|++|..++..|++. ||+|+++.++++
T Consensus 10 ~~vlVTGatGfIG~~l~~~Ll~~--G~~V~~~~r~~~ 44 (338)
T 2rh8_A 10 KTACVVGGTGFVASLLVKLLLQK--GYAVNTTVRDPD 44 (338)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHT--TCEEEEEESCTT
T ss_pred CEEEEECCchHHHHHHHHHHHHC--CCEEEEEEcCcc
Confidence 6899999 799999999999999 999999988764
No 396
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=95.25 E-value=0.013 Score=54.34 Aligned_cols=34 Identities=15% Similarity=0.166 Sum_probs=31.3
Q ss_pred CceEEEEcC-ChhHHHHHHHHHHcCCCCeEEEEeCCH
Q 017997 1 MVKICCIGA-GYVGGPTMAVIALKCPSIEVAVVDISV 36 (362)
Q Consensus 1 ~mkI~VIGl-G~~G~~lA~~la~~~~G~~V~~~d~~~ 36 (362)
||+|.|.|+ |++|..++..|++. |++|+++++++
T Consensus 27 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~ 61 (352)
T 1sb8_A 27 PKVWLITGVAGFIGSNLLETLLKL--DQKVVGLDNFA 61 (352)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCS
T ss_pred CCeEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCC
Confidence 478999997 99999999999999 99999999964
No 397
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=95.24 E-value=0.011 Score=55.85 Aligned_cols=69 Identities=23% Similarity=0.345 Sum_probs=39.5
Q ss_pred CceEEEEc-CChhHHHHHH-HHHHcCCCC---eEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhh
Q 017997 1 MVKICCIG-AGYVGGPTMA-VIALKCPSI---EVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKH 75 (362)
Q Consensus 1 ~mkI~VIG-lG~~G~~lA~-~la~~~~G~---~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a 75 (362)
||||+|+| .|++|.-+.. .|.++ ++ .+..+..+ . .|. ++ +.+.. ..-.+.-..++++
T Consensus 1 m~kVaIvGAtG~vG~~llr~ll~~~--~~~~v~i~~~~~~-s------~G~-~v--~~~~g-----~~i~~~~~~~~~~- 62 (367)
T 1t4b_A 1 MQNVGFIGWRGMVGSVLMQRMVEER--DFDAIRPVFFSTS-Q------LGQ-AA--PSFGG-----TTGTLQDAFDLEA- 62 (367)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTT--GGGGSEEEEEESS-S------TTS-BC--CGGGT-----CCCBCEETTCHHH-
T ss_pred CcEEEEECCCCHHHHHHHHHHHhcC--CCCeEEEEEEEeC-C------CCC-Cc--cccCC-----CceEEEecCChHH-
Confidence 78999999 9999999999 45544 43 44454442 1 111 11 00000 0011222234554
Q ss_pred hcCCcEEEEecc
Q 017997 76 VSEADIVFVSVN 87 (362)
Q Consensus 76 ~~~aDvVii~vp 87 (362)
++++|+||.|+|
T Consensus 63 ~~~~DvVf~a~g 74 (367)
T 1t4b_A 63 LKALDIIVTCQG 74 (367)
T ss_dssp HHTCSEEEECSC
T ss_pred hcCCCEEEECCC
Confidence 679999999976
No 398
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=95.24 E-value=0.013 Score=54.30 Aligned_cols=35 Identities=23% Similarity=0.395 Sum_probs=30.8
Q ss_pred ceEEEEcCChhHHHHHHHHHHcC----CCCeEEEEeCCH
Q 017997 2 VKICCIGAGYVGGPTMAVIALKC----PSIEVAVVDISV 36 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~----~G~~V~~~d~~~ 36 (362)
|+|.|||.|.+|+++|..|++++ |+++|+++|.+.
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 78999999999999999999992 229999999874
No 399
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=95.23 E-value=0.14 Score=45.42 Aligned_cols=39 Identities=21% Similarity=0.273 Sum_probs=34.2
Q ss_pred eEEEEcC-C-hhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHH
Q 017997 3 KICCIGA-G-YVGGPTMAVIALKCPSIEVAVVDISVSRINAWN 43 (362)
Q Consensus 3 kI~VIGl-G-~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~ 43 (362)
++.|.|. | .+|..+|..|++. |++|++.++++++.+.+.
T Consensus 24 ~vlITGasg~GIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~ 64 (266)
T 3o38_A 24 VVLVTAAAGTGIGSTTARRALLE--GADVVISDYHERRLGETR 64 (266)
T ss_dssp EEEESSCSSSSHHHHHHHHHHHT--TCEEEEEESCHHHHHHHH
T ss_pred EEEEECCCCCchHHHHHHHHHHC--CCEEEEecCCHHHHHHHH
Confidence 5778898 8 5999999999999 999999999998876654
No 400
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=95.22 E-value=0.056 Score=49.10 Aligned_cols=35 Identities=14% Similarity=0.216 Sum_probs=28.5
Q ss_pred ceEEEEcC-ChhHHHHHHHHHHcCCCCeEEEEeCCHHH
Q 017997 2 VKICCIGA-GYVGGPTMAVIALKCPSIEVAVVDISVSR 38 (362)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~la~~~~G~~V~~~d~~~~~ 38 (362)
|+|.|.|+ |++|..++..|++. |++|++++++++.
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~ 38 (315)
T 2ydy_A 3 RRVLVTGATGLLGRAVHKEFQQN--NWHAVGCGFRRAR 38 (315)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTT--TCEEEEEC-----
T ss_pred CeEEEECCCcHHHHHHHHHHHhC--CCeEEEEccCCCC
Confidence 68999996 99999999999998 9999999987543
No 401
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=95.19 E-value=0.012 Score=54.94 Aligned_cols=32 Identities=22% Similarity=0.381 Sum_probs=24.5
Q ss_pred ceEEEEc-CChhHHHHHHHHHHc-CCCCeEEEEe
Q 017997 2 VKICCIG-AGYVGGPTMAVIALK-CPSIEVAVVD 33 (362)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~la~~-~~G~~V~~~d 33 (362)
|||+|+| .||+|.-+...|.++ +|..++..+.
T Consensus 2 ~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~ 35 (344)
T 3tz6_A 2 LSIGIVGATGQVGQVMRTLLDERDFPASAVRFFA 35 (344)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCceEEEEEE
Confidence 6999999 799999999988886 1223455554
No 402
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=95.18 E-value=0.21 Score=44.24 Aligned_cols=42 Identities=17% Similarity=0.172 Sum_probs=34.9
Q ss_pred CceEEEE--cCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHc
Q 017997 1 MVKICCI--GAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNS 44 (362)
Q Consensus 1 ~mkI~VI--GlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~ 44 (362)
|.|..+| |.+.+|..+|..|++. |.+|++.|+++++.+.+.+
T Consensus 1 MnK~vlVTGas~GIG~aia~~la~~--Ga~V~~~~~~~~~~~~~~~ 44 (247)
T 3ged_A 1 MNRGVIVTGGGHGIGKQICLDFLEA--GDKVCFIDIDEKRSADFAK 44 (247)
T ss_dssp -CCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHT
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH
Confidence 5566666 5788999999999999 9999999999988877654
No 403
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=95.14 E-value=0.0082 Score=55.53 Aligned_cols=36 Identities=25% Similarity=0.456 Sum_probs=31.5
Q ss_pred CceEEEEc-CChhHHHHHHHHHHcCCCCeEEEEeCCH
Q 017997 1 MVKICCIG-AGYVGGPTMAVIALKCPSIEVAVVDISV 36 (362)
Q Consensus 1 ~mkI~VIG-lG~~G~~lA~~la~~~~G~~V~~~d~~~ 36 (362)
||+|.|.| .|++|..++..|++.++|++|+++++++
T Consensus 4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~ 40 (348)
T 1oc2_A 4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLT 40 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCC
T ss_pred CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 57899999 5999999999999875579999999864
No 404
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=95.11 E-value=0.023 Score=52.28 Aligned_cols=39 Identities=21% Similarity=0.370 Sum_probs=33.5
Q ss_pred ceEEEEcC-ChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHH
Q 017997 2 VKICCIGA-GYVGGPTMAVIALKCPSIEVAVVDISVSRINA 41 (362)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~ 41 (362)
|+|.|.|+ |++|..++..|++.+ |++|+++++++++.+.
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~-g~~V~~~~r~~~~~~~ 40 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLRED-HYEVYGLDIGSDAISR 40 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHST-TCEEEEEESCCGGGGG
T ss_pred CeEEEECCCcHHHHHHHHHHHHhC-CCEEEEEeCCcchHHH
Confidence 78999996 999999999999862 6999999998766543
No 405
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=95.08 E-value=0.021 Score=54.18 Aligned_cols=33 Identities=24% Similarity=0.309 Sum_probs=31.0
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCH
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISV 36 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~ 36 (362)
++|.|||+|..|+.+|..|++. |++|+++|+++
T Consensus 24 ~dV~IVGaG~aGl~~A~~La~~--G~~V~v~E~~~ 56 (407)
T 3rp8_A 24 MKAIVIGAGIGGLSAAVALKQS--GIDCDVYEAVK 56 (407)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCEEEEeCCC
Confidence 5799999999999999999999 99999999875
No 406
>2d2i_A Glyceraldehyde 3-phosphate dehydrogenase; rossmann fold, protein-NADP+ complex, oxidoreductase; HET: NAP; 2.50A {Synechococcus SP} PDB: 2duu_A
Probab=95.07 E-value=0.071 Score=50.24 Aligned_cols=42 Identities=12% Similarity=0.193 Sum_probs=31.7
Q ss_pred ceEEEEcCChhHHHHHHHHHHcC-CCCeEEEE-eC-CHHHHHHHH
Q 017997 2 VKICCIGAGYVGGPTMAVIALKC-PSIEVAVV-DI-SVSRINAWN 43 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~-~G~~V~~~-d~-~~~~~~~l~ 43 (362)
+||+|+|.|++|..+.+.|.++. ++.+|+++ |+ +++....+.
T Consensus 3 ikVgInGfGrIGr~vlR~l~~~~~~~veIVaInd~~d~~~~a~ll 47 (380)
T 2d2i_A 3 IRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNTSDARTAAHLL 47 (380)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSCSEEEEEEECSSCHHHHHHHH
T ss_pred cEEEEECcCHHHHHHHHHHhcCCCCCEEEEEEecCCCHHHHHHhh
Confidence 69999999999999999988752 46787776 43 566655443
No 407
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=95.07 E-value=0.035 Score=51.69 Aligned_cols=42 Identities=12% Similarity=0.193 Sum_probs=32.2
Q ss_pred ceEEEEcCChhHHHHHHHHHHcC-CCCeEEEEe-C-CHHHHHHHH
Q 017997 2 VKICCIGAGYVGGPTMAVIALKC-PSIEVAVVD-I-SVSRINAWN 43 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~-~G~~V~~~d-~-~~~~~~~l~ 43 (362)
+||+|+|.|++|..+.+.|.++. |+++|+++. + +++....+-
T Consensus 3 ikVgI~G~G~IGr~v~r~l~~~~~~~~evvaInd~~~~~~~~~l~ 47 (339)
T 3b1j_A 3 IRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNTSDARTAAHLL 47 (339)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSCCSEEEEEEECSSCHHHHHHHH
T ss_pred eEEEEECCCHHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHh
Confidence 59999999999999999988762 467887764 4 666665543
No 408
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=95.04 E-value=0.02 Score=54.60 Aligned_cols=33 Identities=27% Similarity=0.349 Sum_probs=31.0
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCH
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISV 36 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~ 36 (362)
|+|.|||.|..|++.|..|+++ |++|++++.++
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~--G~~V~vlE~~~ 33 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARN--GHEIIVLEKSA 33 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT--TCEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHHC--CCeEEEEeCCC
Confidence 7999999999999999999999 99999999863
No 409
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=95.03 E-value=0.016 Score=54.57 Aligned_cols=36 Identities=25% Similarity=0.289 Sum_probs=32.5
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHH
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVS 37 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~ 37 (362)
|+|.|||.|..|+.+|..|++..||++|+++++++.
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~ 36 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDE 36 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCC
Confidence 689999999999999999998766899999998753
No 410
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=95.02 E-value=0.29 Score=45.54 Aligned_cols=40 Identities=30% Similarity=0.411 Sum_probs=33.4
Q ss_pred eEEEEcCChhHHHHHHHHHHcCCCC-eEEEEeCCHHHHHHHHc
Q 017997 3 KICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISVSRINAWNS 44 (362)
Q Consensus 3 kI~VIGlG~~G~~lA~~la~~~~G~-~V~~~d~~~~~~~~l~~ 44 (362)
+|.|+|+|.+|+..+..+... |. +|+++|+++++.+.+++
T Consensus 174 ~VlV~GaG~vG~~aiqlak~~--Ga~~Vi~~~~~~~~~~~a~~ 214 (356)
T 1pl8_A 174 KVLVCGAGPIGMVTLLVAKAM--GAAQVVVTDLSATRLSKAKE 214 (356)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--TCSEEEEEESCHHHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHHHH
Confidence 689999999999766655555 87 89999999999887765
No 411
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=95.01 E-value=0.2 Score=46.53 Aligned_cols=40 Identities=20% Similarity=0.189 Sum_probs=34.0
Q ss_pred eEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHc
Q 017997 3 KICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNS 44 (362)
Q Consensus 3 kI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~ 44 (362)
+|.|+|+|.+|...+..+... |.+|+++|+++++.+.+++
T Consensus 171 ~VlV~GaG~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~ 210 (352)
T 1e3j_A 171 TVLVIGAGPIGLVSVLAAKAY--GAFVVCTARSPRRLEVAKN 210 (352)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHc--CCEEEEEcCCHHHHHHHHH
Confidence 689999999998777666556 8899999999999887765
No 412
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=94.98 E-value=0.02 Score=52.51 Aligned_cols=33 Identities=27% Similarity=0.353 Sum_probs=30.7
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCH
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISV 36 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~ 36 (362)
++|.|||.|..|+.+|..|++. |++|+++|+++
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~--G~~V~vlE~~~ 35 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAA--GHQVHLFDKSR 35 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT--TCCEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHHC--CCcEEEEECCC
Confidence 5799999999999999999999 99999999864
No 413
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=94.96 E-value=0.16 Score=45.53 Aligned_cols=72 Identities=21% Similarity=0.192 Sum_probs=51.9
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCC-CeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCc
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPS-IEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G-~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (362)
.++.|+|+|-.+.+++..|++. | .+|++++|+.++.+.+.+. +... ........... .++++|
T Consensus 126 ~~~lilGaGGaarai~~aL~~~--g~~~i~i~nRt~~ra~~la~~------------~~~~-~~~~~~~~~~~-~~~~~d 189 (269)
T 3tum_A 126 KRALVIGCGGVGSAIAYALAEA--GIASITLCDPSTARMGAVCEL------------LGNG-FPGLTVSTQFS-GLEDFD 189 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCSEEEEECSCHHHHHHHHHH------------HHHH-CTTCEEESCCS-CSTTCS
T ss_pred CeEEEEecHHHHHHHHHHHHHh--CCCeEEEeCCCHHHHHHHHHH------------Hhcc-CCcceehhhhh-hhhccc
Confidence 4789999999999999999998 5 5899999999998877641 1100 11233333333 367899
Q ss_pred EEEEeccCC
Q 017997 81 IVFVSVNTP 89 (362)
Q Consensus 81 vVii~vptp 89 (362)
+||=|+|..
T Consensus 190 liiNaTp~G 198 (269)
T 3tum_A 190 LVANASPVG 198 (269)
T ss_dssp EEEECSSTT
T ss_pred ccccCCccc
Confidence 999997643
No 414
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=94.94 E-value=0.27 Score=43.71 Aligned_cols=40 Identities=20% Similarity=0.267 Sum_probs=34.0
Q ss_pred eEEEE--cCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHc
Q 017997 3 KICCI--GAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNS 44 (362)
Q Consensus 3 kI~VI--GlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~ 44 (362)
|+++| |.+.+|..+|..|++. |.+|+++|+++++++++.+
T Consensus 8 KvalVTGas~GIG~aiA~~la~~--Ga~Vv~~~~~~~~~~~~~~ 49 (254)
T 4fn4_A 8 KVVIVTGAGSGIGRAIAKKFALN--DSIVVAVELLEDRLNQIVQ 49 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEECCHHHHHHHHH
Confidence 56666 4678999999999999 9999999999998877653
No 415
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=94.93 E-value=0.38 Score=40.86 Aligned_cols=110 Identities=11% Similarity=0.115 Sum_probs=67.8
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEE-ecCHHhh---hc
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFF-STDVEKH---VS 77 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~-t~d~~~a---~~ 77 (362)
++|.-+|+|. |. ++..+++. +.+|+++|++++.++.+++.... .+ ...++++ ..|..+. ..
T Consensus 57 ~~vLDlGcG~-G~-~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~---~g--------~~~~v~~~~~d~~~~~~~~~ 121 (204)
T 3njr_A 57 ELLWDIGGGS-GS-VSVEWCLA--GGRAITIEPRADRIENIQKNIDT---YG--------LSPRMRAVQGTAPAALADLP 121 (204)
T ss_dssp CEEEEETCTT-CH-HHHHHHHT--TCEEEEEESCHHHHHHHHHHHHH---TT--------CTTTEEEEESCTTGGGTTSC
T ss_pred CEEEEecCCC-CH-HHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHH---cC--------CCCCEEEEeCchhhhcccCC
Confidence 3688899997 53 56677777 78999999999998876642000 00 0113433 2333331 34
Q ss_pred CCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccHHHHHHHHHhc
Q 017997 78 EADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHN 144 (362)
Q Consensus 78 ~aDvVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~~~l~~~l~~~ 144 (362)
..|+|++.-. . + .. +++.+.+.++++..++.. +..+.+...+.+.+++.
T Consensus 122 ~~D~v~~~~~--~-----------~---~~-~l~~~~~~LkpgG~lv~~-~~~~~~~~~~~~~l~~~ 170 (204)
T 3njr_A 122 LPEAVFIGGG--G-----------S---QA-LYDRLWEWLAPGTRIVAN-AVTLESETLLTQLHARH 170 (204)
T ss_dssp CCSEEEECSC--C-----------C---HH-HHHHHHHHSCTTCEEEEE-ECSHHHHHHHHHHHHHH
T ss_pred CCCEEEECCc--c-----------c---HH-HHHHHHHhcCCCcEEEEE-ecCcccHHHHHHHHHhC
Confidence 6899986531 1 1 24 778888889988777653 34445555666666654
No 416
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=94.93 E-value=0.015 Score=54.28 Aligned_cols=31 Identities=13% Similarity=0.230 Sum_probs=29.4
Q ss_pred EEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCH
Q 017997 4 ICCIGAGYVGGPTMAVIALKCPSIEVAVVDISV 36 (362)
Q Consensus 4 I~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~ 36 (362)
|.|||+|..|+++|..|+++ |++|+++|+.+
T Consensus 7 ViIVGaGpaGl~~A~~La~~--G~~V~v~Er~~ 37 (397)
T 3oz2_A 7 VLVVGGGPGGSTAARYAAKY--GLKTLMIEKRP 37 (397)
T ss_dssp EEEECCSHHHHHHHHHHHHT--TCCEEEECSSS
T ss_pred EEEECcCHHHHHHHHHHHHC--CCcEEEEeCCC
Confidence 99999999999999999999 99999999864
No 417
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=94.91 E-value=0.02 Score=53.67 Aligned_cols=31 Identities=32% Similarity=0.463 Sum_probs=29.6
Q ss_pred eEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCC
Q 017997 3 KICCIGAGYVGGPTMAVIALKCPSIEVAVVDIS 35 (362)
Q Consensus 3 kI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~ 35 (362)
+|.|||.|..|+++|..|++. |++|+++|.+
T Consensus 7 dVvIIGgGi~Gl~~A~~La~~--G~~V~lle~~ 37 (382)
T 1y56_B 7 EIVVIGGGIVGVTIAHELAKR--GEEVTVIEKR 37 (382)
T ss_dssp SEEEECCSHHHHHHHHHHHHT--TCCEEEECSS
T ss_pred CEEEECCCHHHHHHHHHHHHC--CCeEEEEeCC
Confidence 599999999999999999999 9999999986
No 418
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=94.90 E-value=0.14 Score=48.17 Aligned_cols=40 Identities=15% Similarity=0.207 Sum_probs=33.9
Q ss_pred eEEEEcCChhHHHHHHHHHHcCCCC-eEEEEeCCHHHHHHHHc
Q 017997 3 KICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISVSRINAWNS 44 (362)
Q Consensus 3 kI~VIGlG~~G~~lA~~la~~~~G~-~V~~~d~~~~~~~~l~~ 44 (362)
+|.|+|+|.+|+..+..+... |. +|+++|+++++.+.+++
T Consensus 196 ~VlV~GaG~vG~~a~q~a~~~--Ga~~Vi~~~~~~~~~~~a~~ 236 (378)
T 3uko_A 196 NVAIFGLGTVGLAVAEGAKTA--GASRIIGIDIDSKKYETAKK 236 (378)
T ss_dssp CEEEECCSHHHHHHHHHHHHH--TCSCEEEECSCTTHHHHHHT
T ss_pred EEEEECCCHHHHHHHHHHHHc--CCCeEEEEcCCHHHHHHHHH
Confidence 689999999999766666666 87 89999999999987775
No 419
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=94.89 E-value=0.019 Score=53.96 Aligned_cols=33 Identities=21% Similarity=0.390 Sum_probs=25.2
Q ss_pred ceEEEEcCChhHHHHHHHHHHcC--CCCeEEEE-eC
Q 017997 2 VKICCIGAGYVGGPTMAVIALKC--PSIEVAVV-DI 34 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~--~G~~V~~~-d~ 34 (362)
+||+|||+|.||..++..+.+.. .+.+|+++ |+
T Consensus 5 i~vgIiG~G~VG~~~~~~l~~~~~g~~~~vvaV~d~ 40 (358)
T 1ebf_A 5 VNVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLAEA 40 (358)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEECS
T ss_pred EEEEEEecCHHHHHHHHHHHhcCCCCCEEEEEEEEC
Confidence 68999999999999999998851 12465544 54
No 420
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=94.83 E-value=0.028 Score=52.30 Aligned_cols=31 Identities=19% Similarity=0.448 Sum_probs=29.5
Q ss_pred eEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCC
Q 017997 3 KICCIGAGYVGGPTMAVIALKCPSIEVAVVDIS 35 (362)
Q Consensus 3 kI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~ 35 (362)
.|.|||.|.+|+++|..|++. |++|+++|..
T Consensus 8 dVvVIG~Gi~Gls~A~~La~~--G~~V~vle~~ 38 (363)
T 1c0p_A 8 RVVVLGSGVIGLSSALILARK--GYSVHILARD 38 (363)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--TCEEEEEESS
T ss_pred CEEEECCCHHHHHHHHHHHhC--CCEEEEEecc
Confidence 699999999999999999999 9999999975
No 421
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=94.82 E-value=0.15 Score=48.46 Aligned_cols=40 Identities=20% Similarity=0.297 Sum_probs=33.3
Q ss_pred eEEEEcCChhHHHHHHHHHHcCCCC-eEEEEeCCHHHHHHHHc
Q 017997 3 KICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISVSRINAWNS 44 (362)
Q Consensus 3 kI~VIGlG~~G~~lA~~la~~~~G~-~V~~~d~~~~~~~~l~~ 44 (362)
+|.|+|+|.+|+..+..+... |. +|+++|+++++.+.+++
T Consensus 216 ~VlV~GaG~vG~~aiqlak~~--Ga~~Vi~~~~~~~~~~~~~~ 256 (404)
T 3ip1_A 216 NVVILGGGPIGLAAVAILKHA--GASKVILSEPSEVRRNLAKE 256 (404)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--TCSEEEEECSCHHHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHHHH
Confidence 689999999998666555555 88 99999999999987765
No 422
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=94.80 E-value=0.11 Score=47.90 Aligned_cols=40 Identities=23% Similarity=0.269 Sum_probs=34.4
Q ss_pred eEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHc
Q 017997 3 KICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNS 44 (362)
Q Consensus 3 kI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~ 44 (362)
+|.|+|+|.+|+..+..+... |.+|+++|+++++.+.+++
T Consensus 169 ~VlV~GaG~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~ 208 (340)
T 3s2e_A 169 WVVISGIGGLGHVAVQYARAM--GLRVAAVDIDDAKLNLARR 208 (340)
T ss_dssp EEEEECCSTTHHHHHHHHHHT--TCEEEEEESCHHHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHH
Confidence 689999999998776666666 8999999999999998776
No 423
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=94.76 E-value=0.057 Score=51.59 Aligned_cols=34 Identities=15% Similarity=0.115 Sum_probs=31.1
Q ss_pred ceEEEEcC-ChhHHHHHHHHHHcCCCCeEEEEeCCHH
Q 017997 2 VKICCIGA-GYVGGPTMAVIALKCPSIEVAVVDISVS 37 (362)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~la~~~~G~~V~~~d~~~~ 37 (362)
|+|.|.|+ |++|..++..|++. |++|++++|+++
T Consensus 70 ~~vlVTGatG~iG~~l~~~L~~~--g~~V~~~~R~~~ 104 (427)
T 4f6c_A 70 GNTLLTGATGFLGAYLIEALQGY--SHRIYCFIRADN 104 (427)
T ss_dssp EEEEEECTTSHHHHHHHHHHTTT--EEEEEEEEECSS
T ss_pred CEEEEecCCcHHHHHHHHHHHcC--CCEEEEEECCCC
Confidence 58999995 99999999999887 999999999876
No 424
>1rm4_O Glyceraldehyde 3-phosphate dehydrogenase A; rossmann fold, GAPDH-NADP complex, oxidoreductase; HET: NDP; 2.00A {Spinacia oleracea} SCOP: c.2.1.3 d.81.1.1 PDB: 1nbo_O* 2hki_A 2pkq_P* 1rm5_O* 1rm3_O* 2pkr_O* 1jn0_O* 3qv1_A* 3k2b_A* 3rvd_A* 2pkq_O*
Probab=94.74 E-value=0.055 Score=50.23 Aligned_cols=43 Identities=16% Similarity=0.250 Sum_probs=31.3
Q ss_pred CceEEEEcCChhHHHHHHHHHHcC-CCCeEEEEe-C-CHHHHHHHH
Q 017997 1 MVKICCIGAGYVGGPTMAVIALKC-PSIEVAVVD-I-SVSRINAWN 43 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~la~~~-~G~~V~~~d-~-~~~~~~~l~ 43 (362)
|+||+|+|.|++|..+.+.|.++. |..+|+.+. . +++....+-
T Consensus 1 ~ikVgInG~G~IGr~llR~l~~~~~p~~eivaInd~~~~~~~a~ll 46 (337)
T 1rm4_O 1 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLL 46 (337)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCSSCSEEEEEEECTTCHHHHHHHH
T ss_pred CeEEEEECCCHHHHHHHHHHHhCCCCCeEEEEEEcCCCHHHHHHHh
Confidence 579999999999999999888652 456776654 2 555555443
No 425
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=94.73 E-value=0.056 Score=50.25 Aligned_cols=68 Identities=21% Similarity=0.239 Sum_probs=48.6
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCcE
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADI 81 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aDv 81 (362)
.+|.|+|+|.+|+..+..+... |.+|+++++++++.+.+++-.. ...+ ++.+...+..|+
T Consensus 178 ~~VlV~GaG~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~lGa-----------------~~v~-~~~~~~~~~~D~ 237 (348)
T 3two_A 178 TKVGVAGFGGLGSMAVKYAVAM--GAEVSVFARNEHKKQDALSMGV-----------------KHFY-TDPKQCKEELDF 237 (348)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT--TCEEEEECSSSTTHHHHHHTTC-----------------SEEE-SSGGGCCSCEEE
T ss_pred CEEEEECCcHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHhcCC-----------------Ceec-CCHHHHhcCCCE
Confidence 3689999999998766665556 8999999999999887765211 1122 344432337999
Q ss_pred EEEeccCC
Q 017997 82 VFVSVNTP 89 (362)
Q Consensus 82 Vii~vptp 89 (362)
||-|++.+
T Consensus 238 vid~~g~~ 245 (348)
T 3two_A 238 IISTIPTH 245 (348)
T ss_dssp EEECCCSC
T ss_pred EEECCCcH
Confidence 99998754
No 426
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=94.73 E-value=0.025 Score=53.78 Aligned_cols=33 Identities=30% Similarity=0.285 Sum_probs=31.0
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCH
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISV 36 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~ 36 (362)
|+|.|||.|..|++.|..|+++ |++|++++.+.
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~--G~~V~vlE~~~ 33 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKA--GHEVEVFERLP 33 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHT--TCEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhC--CCceEEEeCCC
Confidence 7899999999999999999999 99999999864
No 427
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=94.71 E-value=0.028 Score=53.45 Aligned_cols=35 Identities=17% Similarity=0.221 Sum_probs=31.5
Q ss_pred CceEEEEcCChhHHHHHHHHHH---cCCCCeEEEEeCCHH
Q 017997 1 MVKICCIGAGYVGGPTMAVIAL---KCPSIEVAVVDISVS 37 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~la~---~~~G~~V~~~d~~~~ 37 (362)
|++|.|||.|..|+..|..|++ . |++|+++|+++.
T Consensus 1 m~~VvIIGgG~aGl~aA~~L~~~~~~--g~~V~vie~~~~ 38 (409)
T 3h8l_A 1 MTKVLVLGGRFGALTAAYTLKRLVGS--KADVKVINKSRF 38 (409)
T ss_dssp -CEEEEECSSHHHHHHHHHHHHHHGG--GSEEEEEESSSE
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCC--CCeEEEEeCCCC
Confidence 6899999999999999999999 7 899999998763
No 428
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=94.64 E-value=0.022 Score=51.81 Aligned_cols=73 Identities=18% Similarity=0.262 Sum_probs=42.5
Q ss_pred CceEEEEcC-ChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCC
Q 017997 1 MVKICCIGA-GYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEA 79 (362)
Q Consensus 1 ~mkI~VIGl-G~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~a 79 (362)
||+|.|.|. |++|..++..|++. |+.|.+..++....+.+..+ ..+ ....+.- .+..++++++
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~--g~~v~~~~~~~~~~~~~~~~-~~~------------~~~Dl~~-~~~~~~~~~~ 64 (313)
T 3ehe_A 1 MSLIVVTGGAGFIGSHVVDKLSES--NEIVVIDNLSSGNEEFVNEA-ARL------------VKADLAA-DDIKDYLKGA 64 (313)
T ss_dssp --CEEEETTTSHHHHHHHHHHTTT--SCEEEECCCSSCCGGGSCTT-EEE------------ECCCTTT-SCCHHHHTTC
T ss_pred CCEEEEECCCchHHHHHHHHHHhC--CCEEEEEcCCCCChhhcCCC-cEE------------EECcCCh-HHHHHHhcCC
Confidence 789999995 99999999999998 85555444443222211110 000 0111211 3445667899
Q ss_pred cEEEEeccCC
Q 017997 80 DIVFVSVNTP 89 (362)
Q Consensus 80 DvVii~vptp 89 (362)
|+||-+...+
T Consensus 65 d~vih~a~~~ 74 (313)
T 3ehe_A 65 EEVWHIAANP 74 (313)
T ss_dssp SEEEECCCCC
T ss_pred CEEEECCCCC
Confidence 9999886543
No 429
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=94.64 E-value=0.091 Score=48.80 Aligned_cols=40 Identities=25% Similarity=0.161 Sum_probs=34.6
Q ss_pred eEEEEcCChhHHHHHHHHHHcCCCC-eEEEEeCCHHHHHHHHc
Q 017997 3 KICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISVSRINAWNS 44 (362)
Q Consensus 3 kI~VIGlG~~G~~lA~~la~~~~G~-~V~~~d~~~~~~~~l~~ 44 (362)
+|.|+|+|.+|...+..+... |. +|+++++++++.+.+++
T Consensus 170 ~VlV~GaG~vG~~~~q~a~~~--Ga~~Vi~~~~~~~~~~~~~~ 210 (348)
T 2d8a_A 170 SVLITGAGPLGLLGIAVAKAS--GAYPVIVSEPSDFRRELAKK 210 (348)
T ss_dssp CEEEECCSHHHHHHHHHHHHT--TCCSEEEECSCHHHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHHHH
Confidence 689999999999887777666 88 99999999999887764
No 430
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=94.57 E-value=0.039 Score=49.72 Aligned_cols=33 Identities=21% Similarity=0.300 Sum_probs=30.3
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCH
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISV 36 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~ 36 (362)
++|.|||+|.+|..-+..|.+. |++|++++.+.
T Consensus 14 k~VLVVGgG~va~rka~~Ll~~--Ga~VtViap~~ 46 (274)
T 1kyq_A 14 KRILLIGGGEVGLTRLYKLMPT--GCKLTLVSPDL 46 (274)
T ss_dssp CEEEEEEESHHHHHHHHHHGGG--TCEEEEEEEEE
T ss_pred CEEEEECCcHHHHHHHHHHHhC--CCEEEEEcCCC
Confidence 5899999999999999999999 99999998753
No 431
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=94.56 E-value=0.049 Score=54.28 Aligned_cols=42 Identities=10% Similarity=0.030 Sum_probs=38.9
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcC
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSD 45 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~ 45 (362)
++|.|+|.|.+|..++..|.+. |++|+++|.|+++++.+.+.
T Consensus 128 ~hviI~G~g~~g~~la~~L~~~--~~~vvvid~~~~~~~~~~~~ 169 (565)
T 4gx0_A 128 GHILIFGIDPITRTLIRKLESR--NHLFVVVTDNYDQALHLEEQ 169 (565)
T ss_dssp SCEEEESCCHHHHHHHHHTTTT--TCCEEEEESCHHHHHHHHHS
T ss_pred CeEEEECCChHHHHHHHHHHHC--CCCEEEEECCHHHHHHHHHh
Confidence 4799999999999999999988 99999999999999988765
No 432
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=94.54 E-value=0.16 Score=47.57 Aligned_cols=40 Identities=15% Similarity=0.257 Sum_probs=33.4
Q ss_pred eEEEEcCChhHHHHHHHHHHcCCCC-eEEEEeCCHHHHHHHHc
Q 017997 3 KICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISVSRINAWNS 44 (362)
Q Consensus 3 kI~VIGlG~~G~~lA~~la~~~~G~-~V~~~d~~~~~~~~l~~ 44 (362)
+|.|+|+|.+|+..+..+... |. +|+++|+++++.+.+++
T Consensus 198 ~VlV~GaG~vG~~aiqlak~~--Ga~~Vi~~~~~~~~~~~a~~ 238 (376)
T 1e3i_A 198 TCAVFGLGCVGLSAIIGCKIA--GASRIIAIDINGEKFPKAKA 238 (376)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--TCSEEEEECSCGGGHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHc--CCCeEEEEcCCHHHHHHHHH
Confidence 689999999999766655555 87 89999999999887765
No 433
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=94.51 E-value=0.19 Score=46.37 Aligned_cols=41 Identities=17% Similarity=0.223 Sum_probs=35.7
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHc
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNS 44 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~ 44 (362)
.+|.|+|+|.+|...+..+... |.+|+++++++++.+.+++
T Consensus 166 ~~VlV~GaG~vG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~ 206 (339)
T 1rjw_A 166 EWVAIYGIGGLGHVAVQYAKAM--GLNVVAVDIGDEKLELAKE 206 (339)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH
Confidence 4799999999999888777777 8999999999999987765
No 434
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=94.49 E-value=0.45 Score=41.74 Aligned_cols=39 Identities=15% Similarity=0.139 Sum_probs=32.8
Q ss_pred eEEEEc-CChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHH
Q 017997 3 KICCIG-AGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWN 43 (362)
Q Consensus 3 kI~VIG-lG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~ 43 (362)
++-|.| .|.+|..+|..|++. |++|++.++++++.+.+.
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~ 43 (256)
T 1geg_A 4 VALVTGAGQGIGKAIALRLVKD--GFAVAIADYNDATAKAVA 43 (256)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHH
Confidence 455666 689999999999999 999999999988776543
No 435
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=94.49 E-value=1.1 Score=42.81 Aligned_cols=41 Identities=17% Similarity=0.216 Sum_probs=34.8
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEE-EEeC----------CHHHHHHHHc
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVA-VVDI----------SVSRINAWNS 44 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~-~~d~----------~~~~~~~l~~ 44 (362)
++|+|.|.|.||...|..|.+. |.+|+ +.|. |.+.+.++.+
T Consensus 219 k~vaVqG~GnVG~~~a~~L~~~--GakVVavsD~~G~i~dp~Gld~~~l~~~~~ 270 (419)
T 3aoe_E 219 ARVVVQGLGQVGAAVALHAERL--GMRVVAVATSMGGMYAPEGLDVAEVLSAYE 270 (419)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEEETTEEEECTTCCCHHHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHC--CCEEEEEEcCCCeEECCCCCCHHHHHHHHH
Confidence 4799999999999999999998 89988 7788 7777766654
No 436
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=94.45 E-value=0.15 Score=47.68 Aligned_cols=40 Identities=13% Similarity=0.062 Sum_probs=33.6
Q ss_pred eEEEEcCChhHHHHHHHHHHcCCCC-eEEEEeCCHHHHHHHHc
Q 017997 3 KICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISVSRINAWNS 44 (362)
Q Consensus 3 kI~VIGlG~~G~~lA~~la~~~~G~-~V~~~d~~~~~~~~l~~ 44 (362)
+|.|+|+|.+|+..++.+... |. +|+++|+++++.+.+++
T Consensus 194 ~VlV~GaG~vG~~aiqlak~~--Ga~~Vi~~~~~~~~~~~a~~ 234 (373)
T 1p0f_A 194 TCAVFGLGGVGFSAIVGCKAA--GASRIIGVGTHKDKFPKAIE 234 (373)
T ss_dssp EEEEECCSHHHHHHHHHHHHH--TCSEEEEECSCGGGHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHc--CCCeEEEECCCHHHHHHHHH
Confidence 799999999999776665556 77 89999999999887765
No 437
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=94.44 E-value=0.19 Score=43.57 Aligned_cols=40 Identities=18% Similarity=0.164 Sum_probs=33.9
Q ss_pred ceEEEEc-CChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHH
Q 017997 2 VKICCIG-AGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWN 43 (362)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~ 43 (362)
+++-|.| .|.+|..+|..|++. |++|++.++++++.+.+.
T Consensus 3 k~vlITGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~ 43 (235)
T 3l77_A 3 KVAVITGASRGIGEAIARALARD--GYALALGARSVDRLEKIA 43 (235)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHH
Confidence 3466667 589999999999999 999999999998877654
No 438
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=94.43 E-value=0.031 Score=52.30 Aligned_cols=32 Identities=22% Similarity=0.337 Sum_probs=30.1
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCC
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDIS 35 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~ 35 (362)
++|.|||.|..|+++|..|++. |++|+++|.+
T Consensus 4 ~dvvIIGaG~~Gl~~A~~La~~--G~~V~vie~~ 35 (389)
T 2gf3_A 4 FDVIVVGAGSMGMAAGYQLAKQ--GVKTLLVDAF 35 (389)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--TCCEEEECSS
T ss_pred CCEEEECCCHHHHHHHHHHHhC--CCeEEEEeCC
Confidence 4799999999999999999999 9999999985
No 439
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=94.42 E-value=1.6 Score=41.53 Aligned_cols=72 Identities=18% Similarity=0.154 Sum_probs=46.7
Q ss_pred ceEEEEcCChhHHHHHHHHHH-cCCCCeEE-EEeC----------CHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEe
Q 017997 2 VKICCIGAGYVGGPTMAVIAL-KCPSIEVA-VVDI----------SVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFS 69 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~-~~~G~~V~-~~d~----------~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t 69 (362)
++|+|.|.|.||...|..|.+ . |.+|+ +.|. |.+.+..+.+..-.+.+. .+ .+..
T Consensus 210 ~~vaVqG~GnVG~~~a~~L~e~~--GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g~l~~y----------~~-a~~~ 276 (415)
T 2tmg_A 210 ATVAVQGFGNVGQFAALLISQEL--GSKVVAVSDSRGGIYNPEGFDVEELIRYKKEHGTVVTY----------PK-GERI 276 (415)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--CCEEEEEECSSCEEECTTCCCHHHHHHHHHHSSCSTTC----------SS-SEEE
T ss_pred CEEEEECCcHHHHHHHHHHHHhc--CCEEEEEEeCCCeEECCCCCCHHHHHHHHHhhCCcccC----------CC-ceEc
Confidence 479999999999999999998 7 88888 5566 666666665421111110 01 1222
Q ss_pred cCHHhhh-cCCcEEEEecc
Q 017997 70 TDVEKHV-SEADIVFVSVN 87 (362)
Q Consensus 70 ~d~~~a~-~~aDvVii~vp 87 (362)
+.++.+ .+||+++-|-.
T Consensus 277 -~~~eil~~~~DIliP~A~ 294 (415)
T 2tmg_A 277 -TNEELLELDVDILVPAAL 294 (415)
T ss_dssp -CHHHHTTCSCSEEEECSS
T ss_pred -CchhhhcCCCcEEEecCC
Confidence 233333 48999999964
No 440
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=94.40 E-value=0.017 Score=53.85 Aligned_cols=32 Identities=16% Similarity=0.448 Sum_probs=24.3
Q ss_pred ceEEEEc-CChhHHHHHHHHHHc-CCCCeEEEEe
Q 017997 2 VKICCIG-AGYVGGPTMAVIALK-CPSIEVAVVD 33 (362)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~la~~-~~G~~V~~~d 33 (362)
|||+|+| .|++|..+...|.++ .|..+++.+.
T Consensus 7 ~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~ 40 (340)
T 2hjs_A 7 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLA 40 (340)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEE
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEe
Confidence 6899999 799999999998865 1234556554
No 441
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=94.37 E-value=0.42 Score=42.50 Aligned_cols=39 Identities=18% Similarity=0.219 Sum_probs=33.1
Q ss_pred eEEEEc-CChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHH
Q 017997 3 KICCIG-AGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWN 43 (362)
Q Consensus 3 kI~VIG-lG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~ 43 (362)
++-|.| .|.+|..+|..|++. |++|++.++++++++.+.
T Consensus 6 ~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~ 45 (264)
T 3tfo_A 6 VILITGASGGIGEGIARELGVA--GAKILLGARRQARIEAIA 45 (264)
T ss_dssp EEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHH
T ss_pred EEEEeCCccHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHH
Confidence 355556 589999999999999 999999999998877654
No 442
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=94.37 E-value=0.78 Score=40.49 Aligned_cols=39 Identities=21% Similarity=0.302 Sum_probs=33.1
Q ss_pred eEEEEc-CChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHH
Q 017997 3 KICCIG-AGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWN 43 (362)
Q Consensus 3 kI~VIG-lG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~ 43 (362)
++-|.| .|.+|..+|..|++. |++|++.++++++.+.+.
T Consensus 15 ~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~ 54 (267)
T 1iy8_A 15 VVLITGGGSGLGRATAVRLAAE--GAKLSLVDVSSEGLEASK 54 (267)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHH
Confidence 466666 689999999999999 999999999988776543
No 443
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=94.33 E-value=0.073 Score=41.77 Aligned_cols=95 Identities=19% Similarity=0.128 Sum_probs=61.0
Q ss_pred ceEEEEcC----ChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhc
Q 017997 2 VKICCIGA----GYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVS 77 (362)
Q Consensus 2 mkI~VIGl----G~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~ 77 (362)
.+|+|||+ +.+|..+...|.+. ||+|+-++...+.+ ....+..++.+.-.
T Consensus 5 ~siAVVGaS~~~~~~g~~v~~~L~~~--g~~V~pVnP~~~~i------------------------~G~~~y~sl~dlp~ 58 (122)
T 3ff4_A 5 KKTLILGATPETNRYAYLAAERLKSH--GHEFIPVGRKKGEV------------------------LGKTIINERPVIEG 58 (122)
T ss_dssp CCEEEETCCSCTTSHHHHHHHHHHHH--TCCEEEESSSCSEE------------------------TTEECBCSCCCCTT
T ss_pred CEEEEEccCCCCCCHHHHHHHHHHHC--CCeEEEECCCCCcC------------------------CCeeccCChHHCCC
Confidence 57999998 56899999999998 89999887642211 12455566666334
Q ss_pred CCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCCccccH-HHHHHHHHhc
Q 017997 78 EADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTA-EAIEKILTHN 144 (362)
Q Consensus 78 ~aDvVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv~~gt~-~~l~~~l~~~ 144 (362)
.|++++++|.. .+.++++++.+. .... |+.. +|+. +++.+..++.
T Consensus 59 -vDlavi~~p~~---------------~v~~~v~e~~~~-g~k~-v~~~----~G~~~~e~~~~a~~~ 104 (122)
T 3ff4_A 59 -VDTVTLYINPQ---------------NQLSEYNYILSL-KPKR-VIFN----PGTENEELEEILSEN 104 (122)
T ss_dssp -CCEEEECSCHH---------------HHGGGHHHHHHH-CCSE-EEEC----TTCCCHHHHHHHHHT
T ss_pred -CCEEEEEeCHH---------------HHHHHHHHHHhc-CCCE-EEEC----CCCChHHHHHHHHHc
Confidence 99999998742 344556666554 3334 4332 3443 4566666554
No 444
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=94.33 E-value=0.28 Score=42.57 Aligned_cols=93 Identities=19% Similarity=0.150 Sum_probs=57.3
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEE-ecCHHhhh---c
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFF-STDVEKHV---S 77 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~-t~d~~~a~---~ 77 (362)
.+|..+|+| .|. ++..+++. +.+|+++|++++.++..++.... .++ ..++.+ ..|..+.. .
T Consensus 93 ~~vldiG~G-~G~-~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~---~~~--------~~~~~~~~~d~~~~~~~~~ 157 (248)
T 2yvl_A 93 KRVLEFGTG-SGA-LLAVLSEV--AGEVWTFEAVEEFYKTAQKNLKK---FNL--------GKNVKFFNVDFKDAEVPEG 157 (248)
T ss_dssp CEEEEECCT-TSH-HHHHHHHH--SSEEEEECSCHHHHHHHHHHHHH---TTC--------CTTEEEECSCTTTSCCCTT
T ss_pred CEEEEeCCC-ccH-HHHHHHHh--CCEEEEEecCHHHHHHHHHHHHH---cCC--------CCcEEEEEcChhhcccCCC
Confidence 378999999 565 55566666 68999999999998876642100 000 012332 22332222 3
Q ss_pred CCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEe
Q 017997 78 EADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEK 126 (362)
Q Consensus 78 ~aDvVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~ 126 (362)
..|+|+...|.| ..+++.+.+.++++..++..
T Consensus 158 ~~D~v~~~~~~~-----------------~~~l~~~~~~L~~gG~l~~~ 189 (248)
T 2yvl_A 158 IFHAAFVDVREP-----------------WHYLEKVHKSLMEGAPVGFL 189 (248)
T ss_dssp CBSEEEECSSCG-----------------GGGHHHHHHHBCTTCEEEEE
T ss_pred cccEEEECCcCH-----------------HHHHHHHHHHcCCCCEEEEE
Confidence 589999876532 23566777888887766553
No 445
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=94.29 E-value=0.035 Score=51.27 Aligned_cols=32 Identities=31% Similarity=0.339 Sum_probs=30.1
Q ss_pred eEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCH
Q 017997 3 KICCIGAGYVGGPTMAVIALKCPSIEVAVVDISV 36 (362)
Q Consensus 3 kI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~ 36 (362)
+|.|||.|..|++.|..|++. |++|+++|.++
T Consensus 6 dvvIIG~G~~Gl~~A~~La~~--G~~V~vlE~~~ 37 (369)
T 3dme_A 6 DCIVIGAGVVGLAIARALAAG--GHEVLVAEAAE 37 (369)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--TCCEEEECSSS
T ss_pred CEEEECCCHHHHHHHHHHHhC--CCeEEEEeCCC
Confidence 699999999999999999999 99999999863
No 446
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=94.29 E-value=0.034 Score=53.35 Aligned_cols=33 Identities=21% Similarity=0.225 Sum_probs=30.7
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCH
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISV 36 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~ 36 (362)
++|.|||.|..|+.+|..|++. |++|+++|+.+
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~~--G~~V~viE~~~ 55 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQH--DVDVTVYTDRK 55 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHHT--TCEEEEEESCC
T ss_pred CCEEEECCcHHHHHHHHHHHHC--CCeEEEEcCCC
Confidence 3799999999999999999999 99999999864
No 447
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=94.28 E-value=0.033 Score=52.66 Aligned_cols=33 Identities=18% Similarity=0.263 Sum_probs=30.6
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCH
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISV 36 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~ 36 (362)
++|.|||.|..|+.+|..|++. |++|+++|+++
T Consensus 6 ~~V~IVGaG~aGl~~A~~L~~~--G~~v~v~E~~~ 38 (397)
T 2vou_A 6 DRIAVVGGSISGLTAALMLRDA--GVDVDVYERSP 38 (397)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhC--CCCEEEEecCC
Confidence 4799999999999999999999 99999999864
No 448
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=94.27 E-value=0.15 Score=47.71 Aligned_cols=42 Identities=19% Similarity=0.360 Sum_probs=33.8
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCC-eEEEEeCCHHHHHHHHcC
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISVSRINAWNSD 45 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~-~V~~~d~~~~~~~~l~~~ 45 (362)
.+|.|||+|.+|.++|..|+.. |. +++++|.|.-....++++
T Consensus 119 ~~VlvvG~GglGs~va~~La~a--Gvg~i~lvD~D~Ve~sNL~Rq 161 (353)
T 3h5n_A 119 AKVVILGCGGIGNHVSVILATS--GIGEIILIDNDQIENTNLTRQ 161 (353)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCSEEEEEECCBCCGGGGGTC
T ss_pred CeEEEECCCHHHHHHHHHHHhC--CCCeEEEECCCcCcccccccc
Confidence 4799999999999999999999 64 799999875444445443
No 449
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=94.26 E-value=0.51 Score=41.21 Aligned_cols=40 Identities=23% Similarity=0.236 Sum_probs=34.1
Q ss_pred eEEEEc-CChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHc
Q 017997 3 KICCIG-AGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNS 44 (362)
Q Consensus 3 kI~VIG-lG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~ 44 (362)
++-|.| .|.+|..+|..|++. |++|+++|++++..+.+.+
T Consensus 11 ~vlITGas~giG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~ 51 (253)
T 3qiv_A 11 VGIVTGSGGGIGQAYAEALARE--GAAVVVADINAEAAEAVAK 51 (253)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHH
Confidence 466667 589999999999999 9999999999988776543
No 450
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=94.26 E-value=0.077 Score=48.24 Aligned_cols=41 Identities=20% Similarity=0.327 Sum_probs=30.3
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCC-eEEEEeCCHHHHHHHHc
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISVSRINAWNS 44 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~-~V~~~d~~~~~~~~l~~ 44 (362)
.+|.|||+|.+|+++|..|+.. |. +++++|.|.-....|++
T Consensus 37 ~~VlVvGaGGlGs~va~~La~a--GVG~i~lvD~D~Ve~sNL~R 78 (292)
T 3h8v_A 37 FAVAIVGVGGVGSVTAEMLTRC--GIGKLLLFDYDKVELANMNR 78 (292)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCSEEEEECCCBC-------
T ss_pred CeEEEECcCHHHHHHHHHHHHc--CCCEEEEECCCccChhhccc
Confidence 4799999999999999999999 54 89999987644445554
No 451
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=94.24 E-value=0.097 Score=48.59 Aligned_cols=41 Identities=17% Similarity=0.197 Sum_probs=32.7
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCC-eEEEEeCCHHHHHHHHc
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISVSRINAWNS 44 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~-~V~~~d~~~~~~~~l~~ 44 (362)
.||.|||+|.+|.++|..|+.. |. +++++|.+.-....+++
T Consensus 35 ~~VlIvGaGGlGs~va~~La~a--GVg~ItlvD~D~Ve~SNL~R 76 (340)
T 3rui_A 35 TKVLLLGAGTLGCYVSRALIAW--GVRKITFVDNGTVSYSNPVR 76 (340)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCCEEEEECCCBCCTTSTTT
T ss_pred CEEEEECCCHHHHHHHHHHHHc--CCCEEEEecCCEeccccccc
Confidence 4899999999999999999999 64 79999987543333433
No 452
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=94.23 E-value=0.031 Score=52.06 Aligned_cols=33 Identities=21% Similarity=0.319 Sum_probs=30.4
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCH
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISV 36 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~ 36 (362)
.+|.|||.|.+|+++|..|++. |++|+++|...
T Consensus 3 ~dvvIIG~Gi~Gl~~A~~La~~--G~~V~vle~~~ 35 (372)
T 2uzz_A 3 YDLIIIGSGSVGAAAGYYATRA--GLNVLMTDAHM 35 (372)
T ss_dssp EEEEESCTTHHHHHHHHHHHHT--TCCEEEECSSC
T ss_pred CCEEEECCCHHHHHHHHHHHHC--CCeEEEEecCC
Confidence 4799999999999999999999 99999999863
No 453
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=94.21 E-value=0.96 Score=39.16 Aligned_cols=39 Identities=13% Similarity=0.184 Sum_probs=33.7
Q ss_pred eEEEEc-CChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHH
Q 017997 3 KICCIG-AGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWN 43 (362)
Q Consensus 3 kI~VIG-lG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~ 43 (362)
++-|.| .|.+|..+|..|++. |++|++.++++++++.+.
T Consensus 5 ~vlVTGas~GIG~a~a~~l~~~--G~~V~~~~r~~~~~~~~~ 44 (235)
T 3l6e_A 5 HIIVTGAGSGLGRALTIGLVER--GHQVSMMGRRYQRLQQQE 44 (235)
T ss_dssp EEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHH
Confidence 566777 589999999999999 999999999998877654
No 454
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=94.21 E-value=0.32 Score=43.23 Aligned_cols=39 Identities=18% Similarity=0.094 Sum_probs=34.0
Q ss_pred eEEEE--cCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHH
Q 017997 3 KICCI--GAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWN 43 (362)
Q Consensus 3 kI~VI--GlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~ 43 (362)
|+++| |.+.+|..+|..|++. |.+|++.|++++++++..
T Consensus 10 KvalVTGas~GIG~aia~~la~~--Ga~Vvi~~~~~~~~~~~~ 50 (255)
T 4g81_D 10 KTALVTGSARGLGFAYAEGLAAA--GARVILNDIRATLLAESV 50 (255)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHT--TCEEEECCSCHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHH
Confidence 67777 5788999999999999 999999999998877654
No 455
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=94.21 E-value=0.36 Score=44.91 Aligned_cols=40 Identities=23% Similarity=0.248 Sum_probs=32.8
Q ss_pred eEEEEcCChhHHHHHHHHHHcCCCCe-EEEEeCCHHHHHHHHc
Q 017997 3 KICCIGAGYVGGPTMAVIALKCPSIE-VAVVDISVSRINAWNS 44 (362)
Q Consensus 3 kI~VIGlG~~G~~lA~~la~~~~G~~-V~~~d~~~~~~~~l~~ 44 (362)
+|.|+|+|.+|+..++.+... |.+ |++.|.++++.+.+++
T Consensus 182 ~VlV~GaG~vG~~aiqlak~~--Ga~~Vi~~~~~~~~~~~a~~ 222 (363)
T 3m6i_A 182 PVLICGAGPIGLITMLCAKAA--GACPLVITDIDEGRLKFAKE 222 (363)
T ss_dssp CEEEECCSHHHHHHHHHHHHT--TCCSEEEEESCHHHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHHHH
Confidence 689999999998766555555 886 9999999999887765
No 456
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=94.20 E-value=0.22 Score=46.62 Aligned_cols=40 Identities=15% Similarity=0.236 Sum_probs=33.0
Q ss_pred eEEEEcCChhHHHHHHHHHHcCCCC-eEEEEeCCHHHHHHHHc
Q 017997 3 KICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISVSRINAWNS 44 (362)
Q Consensus 3 kI~VIGlG~~G~~lA~~la~~~~G~-~V~~~d~~~~~~~~l~~ 44 (362)
+|.|+|+|.+|+..+..+... |. +|+++|+++++.+.+++
T Consensus 185 ~VlV~GaG~vG~~aiqlak~~--Ga~~Vi~~~~~~~~~~~a~~ 225 (370)
T 4ej6_A 185 TVAILGGGVIGLLTVQLARLA--GATTVILSTRQATKRRLAEE 225 (370)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--TCSEEEEECSCHHHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHHHH
Confidence 689999999998766555555 87 89999999999887665
No 457
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=94.20 E-value=0.4 Score=42.42 Aligned_cols=39 Identities=26% Similarity=0.268 Sum_probs=32.8
Q ss_pred eEEEEc-CChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHH
Q 017997 3 KICCIG-AGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWN 43 (362)
Q Consensus 3 kI~VIG-lG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~ 43 (362)
++-|.| .|.+|..+|..|++. |++|++.++++++.+.+.
T Consensus 12 ~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~ 51 (262)
T 3pk0_A 12 SVVVTGGTKGIGRGIATVFARA--GANVAVAGRSTADIDACV 51 (262)
T ss_dssp EEEETTCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHH
Confidence 344555 689999999999999 999999999998877654
No 458
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=94.19 E-value=0.41 Score=42.35 Aligned_cols=39 Identities=18% Similarity=0.161 Sum_probs=33.1
Q ss_pred eEEEEc-CChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHH
Q 017997 3 KICCIG-AGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWN 43 (362)
Q Consensus 3 kI~VIG-lG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~ 43 (362)
++-|.| .|.+|..+|..|++. |++|++.++++++.+.+.
T Consensus 10 ~~lVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~ 49 (265)
T 3lf2_A 10 VAVVTGGSSGIGLATVELLLEA--GAAVAFCARDGERLRAAE 49 (265)
T ss_dssp EEEEETCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHH
T ss_pred EEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHH
Confidence 355666 689999999999999 999999999998877654
No 459
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=94.19 E-value=0.038 Score=51.62 Aligned_cols=32 Identities=19% Similarity=0.332 Sum_probs=30.0
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCC
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDIS 35 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~ 35 (362)
.+|.|||.|..|++.|..|++. |++|+++|.+
T Consensus 18 ~dvvIIGgG~~Gl~~A~~La~~--G~~V~llE~~ 49 (382)
T 1ryi_A 18 YEAVVIGGGIIGSAIAYYLAKE--NKNTALFESG 49 (382)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--TCCEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHhC--CCcEEEEeCC
Confidence 4799999999999999999999 9999999986
No 460
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=94.18 E-value=0.049 Score=49.78 Aligned_cols=34 Identities=32% Similarity=0.463 Sum_probs=30.6
Q ss_pred CceEEEEc-CChhHHHHHHHHHHcCCCCeEEEEeCCH
Q 017997 1 MVKICCIG-AGYVGGPTMAVIALKCPSIEVAVVDISV 36 (362)
Q Consensus 1 ~mkI~VIG-lG~~G~~lA~~la~~~~G~~V~~~d~~~ 36 (362)
||+|.|.| .|++|..++..|++. |++|++++++.
T Consensus 1 M~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~ 35 (330)
T 2c20_A 1 MNSILICGGAGYIGSHAVKKLVDE--GLSVVVVDNLQ 35 (330)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCS
T ss_pred CCEEEEECCCcHHHHHHHHHHHhC--CCEEEEEeCCC
Confidence 78999998 599999999999999 99999999864
No 461
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=94.18 E-value=0.23 Score=45.09 Aligned_cols=70 Identities=19% Similarity=0.326 Sum_probs=53.9
Q ss_pred ceEEEEc-CChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcCCc
Q 017997 2 VKICCIG-AGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEAD 80 (362)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~aD 80 (362)
+++.||| ...+|.|+|..|.+. +..|+.+... |.|+.+.+++||
T Consensus 180 k~vvViGRS~iVGkPla~LL~~~--~ATVTi~Hs~---------------------------------T~dl~~~~~~AD 224 (303)
T 4b4u_A 180 KHAVVVGRSAILGKPMAMMLLQA--NATVTICHSR---------------------------------TQNLPELVKQAD 224 (303)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHT--TCEEEEECTT---------------------------------CSSHHHHHHTCS
T ss_pred CEEEEEeccccccchHHHHHHhc--CCEEEEecCC---------------------------------CCCHHHHhhcCC
Confidence 4789999 567899999999998 8999987532 345666788999
Q ss_pred EEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEe
Q 017997 81 IVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEK 126 (362)
Q Consensus 81 vVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~ 126 (362)
+||.+++-|.-. . ...++++++||+-
T Consensus 225 IvV~A~G~p~~i--------------~------~d~vk~GavVIDV 250 (303)
T 4b4u_A 225 IIVGAVGKAELI--------------Q------KDWIKQGAVVVDA 250 (303)
T ss_dssp EEEECSCSTTCB--------------C------GGGSCTTCEEEEC
T ss_pred eEEeccCCCCcc--------------c------cccccCCCEEEEe
Confidence 999999866321 1 2457899999873
No 462
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=94.16 E-value=0.042 Score=51.75 Aligned_cols=32 Identities=25% Similarity=0.329 Sum_probs=30.1
Q ss_pred eEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCH
Q 017997 3 KICCIGAGYVGGPTMAVIALKCPSIEVAVVDISV 36 (362)
Q Consensus 3 kI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~ 36 (362)
.|.|||.|..|++.|..|++. |++|+++|..+
T Consensus 6 DVvIIGaG~~Gl~~A~~La~~--G~~V~vlE~~~ 37 (397)
T 2oln_A 6 DVVVVGGGPVGLATAWQVAER--GHRVLVLERHT 37 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--TCCEEEEESSC
T ss_pred CEEEECCCHHHHHHHHHHHHC--CCeEEEEeCCC
Confidence 699999999999999999999 99999999864
No 463
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=94.14 E-value=0.21 Score=46.73 Aligned_cols=40 Identities=18% Similarity=0.178 Sum_probs=33.6
Q ss_pred eEEEEcCChhHHHHHHHHHHcCCCC-eEEEEeCCHHHHHHHHc
Q 017997 3 KICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISVSRINAWNS 44 (362)
Q Consensus 3 kI~VIGlG~~G~~lA~~la~~~~G~-~V~~~d~~~~~~~~l~~ 44 (362)
+|.|+|+|.+|+..+..+... |. +|+++|+++++.+.+++
T Consensus 194 ~VlV~GaG~vG~~a~qla~~~--Ga~~Vi~~~~~~~~~~~~~~ 234 (374)
T 2jhf_A 194 TCAVFGLGGVGLSVIMGCKAA--GAARIIGVDINKDKFAKAKE 234 (374)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--TCSEEEEECSCGGGHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHc--CCCeEEEEcCCHHHHHHHHH
Confidence 689999999999776666556 87 89999999999887765
No 464
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=94.13 E-value=0.19 Score=46.52 Aligned_cols=41 Identities=20% Similarity=0.301 Sum_probs=33.0
Q ss_pred eEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHc
Q 017997 3 KICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNS 44 (362)
Q Consensus 3 kI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~ 44 (362)
+|.|+|+|.+|+..++.+...+ |.+|+++|+++++.+.+++
T Consensus 174 ~vlv~GaG~vG~~a~qla~~~g-~~~Vi~~~~~~~~~~~~~~ 214 (345)
T 3jv7_A 174 TAVVIGVGGLGHVGIQILRAVS-AARVIAVDLDDDRLALARE 214 (345)
T ss_dssp EEEEECCSHHHHHHHHHHHHHC-CCEEEEEESCHHHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCHHHHHHHHH
Confidence 6899999999986555444432 6899999999999998776
No 465
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=94.12 E-value=0.044 Score=54.39 Aligned_cols=37 Identities=22% Similarity=0.150 Sum_probs=33.7
Q ss_pred CceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHH
Q 017997 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVS 37 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~ 37 (362)
||+|.|||.|.-|+..|..|++.++|++|+++|.++.
T Consensus 1 M~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~ 37 (565)
T 3ntd_A 1 MKKILIIGGVAGGASAAARARRLSETAEIIMFERGEY 37 (565)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSC
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCC
Confidence 7899999999999999999998867899999998754
No 466
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=94.08 E-value=0.039 Score=53.30 Aligned_cols=34 Identities=18% Similarity=0.215 Sum_probs=30.9
Q ss_pred CceEEEEcCChhHHHHHHHHHHcCCCC--eEEEEeCCH
Q 017997 1 MVKICCIGAGYVGGPTMAVIALKCPSI--EVAVVDISV 36 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~la~~~~G~--~V~~~d~~~ 36 (362)
|++|+|||.|..|++.|..|++. |+ +|++++.+.
T Consensus 2 ~~dVvVIGaGiaGLsaA~~L~~~--G~~~~V~vlEa~~ 37 (477)
T 3nks_A 2 GRTVVVLGGGISGLAASYHLSRA--PCPPKVVLVESSE 37 (477)
T ss_dssp CCEEEEECCBHHHHHHHHHHHTS--SSCCEEEEECSSS
T ss_pred CceEEEECCcHHHHHHHHHHHhC--CCCCcEEEEeCCC
Confidence 36899999999999999999999 89 999999753
No 467
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=94.07 E-value=0.039 Score=51.76 Aligned_cols=33 Identities=15% Similarity=0.242 Sum_probs=30.6
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCH
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISV 36 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~ 36 (362)
++|.|||.|..|+.+|..|++. |++|+++|+++
T Consensus 12 ~dVvIVGaG~aGl~~A~~L~~~--G~~v~viE~~~ 44 (379)
T 3alj_A 12 RRAEVAGGGFAGLTAAIALKQN--GWDVRLHEKSS 44 (379)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHC--CCCEEEEecCC
Confidence 4799999999999999999999 99999999864
No 468
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=94.06 E-value=0.052 Score=48.50 Aligned_cols=33 Identities=18% Similarity=0.300 Sum_probs=30.3
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCH
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISV 36 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~ 36 (362)
.+|.|||.|.-|+..|..|++. |++|+++|.++
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~--g~~v~lie~~~ 35 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRA--RKNILLVDAGE 35 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--TCCEEEEECCC
T ss_pred CCEEEECCCHHHHHHHHHHHhC--CCCEEEEeCCC
Confidence 4899999999999999999999 99999999753
No 469
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=94.02 E-value=0.047 Score=53.00 Aligned_cols=36 Identities=19% Similarity=0.242 Sum_probs=31.9
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHH
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVS 37 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~ 37 (362)
|+|.|||.|..|+..|..|++.++|++|+++|.++.
T Consensus 4 ~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~ 39 (472)
T 3iwa_A 4 KHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASR 39 (472)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC--
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCc
Confidence 589999999999999999998877899999999865
No 470
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=94.02 E-value=1.2 Score=38.60 Aligned_cols=39 Identities=15% Similarity=0.101 Sum_probs=33.5
Q ss_pred eEEEEc-CChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHH
Q 017997 3 KICCIG-AGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWN 43 (362)
Q Consensus 3 kI~VIG-lG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~ 43 (362)
++-|.| .|.+|..+|..|++. |++|++.++++++.+.+.
T Consensus 7 ~vlITGas~gIG~~~a~~l~~~--G~~v~~~~r~~~~~~~~~ 46 (247)
T 3lyl_A 7 VALVTGASRGIGFEVAHALASK--GATVVGTATSQASAEKFE 46 (247)
T ss_dssp EEEESSCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHH
Confidence 456666 589999999999999 999999999998877654
No 471
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=94.02 E-value=0.26 Score=46.16 Aligned_cols=40 Identities=15% Similarity=0.196 Sum_probs=33.5
Q ss_pred eEEEEcCChhHHHHHHHHHHcCCCC-eEEEEeCCHHHHHHHHc
Q 017997 3 KICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISVSRINAWNS 44 (362)
Q Consensus 3 kI~VIGlG~~G~~lA~~la~~~~G~-~V~~~d~~~~~~~~l~~ 44 (362)
+|.|+|+|.+|+..+..+... |. +|+++|+++++.+.+++
T Consensus 195 ~VlV~GaG~vG~~a~qla~~~--Ga~~Vi~~~~~~~~~~~~~~ 235 (374)
T 1cdo_A 195 TCAVFGLGAVGLAAVMGCHSA--GAKRIIAVDLNPDKFEKAKV 235 (374)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--TCSEEEEECSCGGGHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHc--CCCEEEEEcCCHHHHHHHHH
Confidence 689999999999776665555 77 89999999999887765
No 472
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=93.99 E-value=0.048 Score=51.55 Aligned_cols=33 Identities=24% Similarity=0.390 Sum_probs=30.7
Q ss_pred eEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHH
Q 017997 3 KICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVS 37 (362)
Q Consensus 3 kI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~ 37 (362)
+|.|||.|..|+.+|..|++. |++|+++|+++.
T Consensus 28 dV~IVGaG~aGl~~A~~L~~~--G~~v~v~E~~~~ 60 (398)
T 2xdo_A 28 NVAIIGGGPVGLTMAKLLQQN--GIDVSVYERDND 60 (398)
T ss_dssp EEEEECCSHHHHHHHHHHHTT--TCEEEEEECSSS
T ss_pred CEEEECCCHHHHHHHHHHHHC--CCCEEEEeCCCC
Confidence 799999999999999999998 999999998753
No 473
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=93.98 E-value=0.74 Score=40.61 Aligned_cols=40 Identities=13% Similarity=0.155 Sum_probs=33.6
Q ss_pred eEEEEc-CChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHc
Q 017997 3 KICCIG-AGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNS 44 (362)
Q Consensus 3 kI~VIG-lG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~ 44 (362)
++-|.| .|.+|..+|..|++. |++|++.++++++.+.+.+
T Consensus 13 ~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~ 53 (264)
T 3ucx_A 13 VVVISGVGPALGTTLARRCAEQ--GADLVLAARTVERLEDVAK 53 (264)
T ss_dssp EEEEESCCTTHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHC--cCEEEEEeCCHHHHHHHHH
Confidence 455666 578999999999999 9999999999988776543
No 474
>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A
Probab=93.97 E-value=0.19 Score=47.31 Aligned_cols=70 Identities=19% Similarity=0.159 Sum_probs=39.9
Q ss_pred ceEEEEc-CChhHHHHHH-HHHHcC-CCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEEecCHHhhhcC
Q 017997 2 VKICCIG-AGYVGGPTMA-VIALKC-PSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSE 78 (362)
Q Consensus 2 mkI~VIG-lG~~G~~lA~-~la~~~-~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~t~d~~~a~~~ 78 (362)
|||+||| .||+|.-+.. .|.++. |..++..+..+. .|.....-.+. .-.+.-.+++++ +++
T Consensus 1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~-------aG~~~~~~~~~--------~~~~~~~~~~~~-~~~ 64 (370)
T 3pzr_A 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQ-------IGVPAPNFGKD--------AGMLHDAFDIES-LKQ 64 (370)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSS-------TTSBCCCSSSC--------CCBCEETTCHHH-HTT
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEeccc-------cCcCHHHhCCC--------ceEEEecCChhH-hcc
Confidence 7999999 5999999998 777651 023555554321 12110000000 011222234444 789
Q ss_pred CcEEEEecc
Q 017997 79 ADIVFVSVN 87 (362)
Q Consensus 79 aDvVii~vp 87 (362)
+|+||.|+|
T Consensus 65 ~Dvvf~a~~ 73 (370)
T 3pzr_A 65 LDAVITCQG 73 (370)
T ss_dssp CSEEEECSC
T ss_pred CCEEEECCC
Confidence 999999976
No 475
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=93.97 E-value=0.041 Score=53.13 Aligned_cols=35 Identities=29% Similarity=0.468 Sum_probs=32.3
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCH
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISV 36 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~ 36 (362)
|+|.|||.|.-|+..|..|++.++|++|+++|.++
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~ 37 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQA 37 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCC
Confidence 79999999999999999999886789999999875
No 476
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=93.97 E-value=0.53 Score=41.40 Aligned_cols=39 Identities=21% Similarity=0.194 Sum_probs=32.9
Q ss_pred eEEEEc-CChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHH
Q 017997 3 KICCIG-AGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWN 43 (362)
Q Consensus 3 kI~VIG-lG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~ 43 (362)
++-|.| .|.+|..+|..|++. |++|++.|++++..+.+.
T Consensus 14 ~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~ 53 (256)
T 3gaf_A 14 VAIVTGAAAGIGRAIAGTFAKA--GASVVVTDLKSEGAEAVA 53 (256)
T ss_dssp EEEECSCSSHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHH
Confidence 345555 689999999999999 999999999998877654
No 477
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=93.92 E-value=0.52 Score=41.53 Aligned_cols=39 Identities=13% Similarity=0.163 Sum_probs=33.6
Q ss_pred eEEEEc-CChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHH
Q 017997 3 KICCIG-AGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWN 43 (362)
Q Consensus 3 kI~VIG-lG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~ 43 (362)
+|-|.| .|.+|..+|..|++. |++|++.++++++.+.+.
T Consensus 31 ~vlITGas~gIG~~la~~l~~~--G~~V~~~~r~~~~~~~~~ 70 (262)
T 3rkr_A 31 VAVVTGASRGIGAAIARKLGSL--GARVVLTARDVEKLRAVE 70 (262)
T ss_dssp EEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHC--CCEEEEEECCHHHHHHHH
Confidence 466666 599999999999999 999999999998877654
No 478
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=93.92 E-value=0.55 Score=41.22 Aligned_cols=41 Identities=12% Similarity=0.060 Sum_probs=34.7
Q ss_pred ceEEEEcC-ChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHc
Q 017997 2 VKICCIGA-GYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNS 44 (362)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~ 44 (362)
++|-|.|. |.+|..+|..|++. |++|++.++++++.+.+.+
T Consensus 6 k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~ 47 (254)
T 1hdc_A 6 KTVIITGGARGLGAEAARQAVAA--GARVVLADVLDEEGAATAR 47 (254)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH
Confidence 45777775 89999999999999 9999999999987766543
No 479
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=93.91 E-value=0.41 Score=44.66 Aligned_cols=40 Identities=18% Similarity=0.185 Sum_probs=33.5
Q ss_pred eEEEEcCChhHHHHHHHHHHcCCCC-eEEEEeCCHHHHHHHHc
Q 017997 3 KICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISVSRINAWNS 44 (362)
Q Consensus 3 kI~VIGlG~~G~~lA~~la~~~~G~-~V~~~d~~~~~~~~l~~ 44 (362)
+|.|+|+|.+|+..++.+... |. +|+++|+++++.+.+++
T Consensus 193 ~VlV~GaG~vG~~avqla~~~--Ga~~Vi~~~~~~~~~~~~~~ 233 (373)
T 2fzw_A 193 VCAVFGLGGVGLAVIMGCKVA--GASRIIGVDINKDKFARAKE 233 (373)
T ss_dssp EEEEECCSHHHHHHHHHHHHH--TCSEEEEECSCGGGHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHc--CCCeEEEEcCCHHHHHHHHH
Confidence 689999999999777666666 77 89999999999887764
No 480
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=93.90 E-value=0.045 Score=52.15 Aligned_cols=33 Identities=15% Similarity=0.250 Sum_probs=30.8
Q ss_pred CceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCC
Q 017997 1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDIS 35 (362)
Q Consensus 1 ~mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~ 35 (362)
|++|.|||.|..|++.|..|++. |++|++++.+
T Consensus 1 ~~dVvVIGaG~aGl~aA~~L~~~--G~~V~vlE~~ 33 (431)
T 3k7m_X 1 MYDAIVVGGGFSGLKAARDLTNA--GKKVLLLEGG 33 (431)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHT--TCCEEEECSS
T ss_pred CCCEEEECCcHHHHHHHHHHHHc--CCeEEEEecC
Confidence 57899999999999999999999 9999999974
No 481
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=93.89 E-value=0.028 Score=50.09 Aligned_cols=34 Identities=21% Similarity=0.227 Sum_probs=30.0
Q ss_pred ceEEEEc-CChhHHHHHHHHHHcCCCCeEEEEeCCHH
Q 017997 2 VKICCIG-AGYVGGPTMAVIALKCPSIEVAVVDISVS 37 (362)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~la~~~~G~~V~~~d~~~~ 37 (362)
++|.|.| .|.+|..++..|++. |++|++.++++.
T Consensus 4 k~vlVTGasg~IG~~la~~L~~~--G~~V~~~~r~~~ 38 (267)
T 3rft_A 4 KRLLVTGAAGQLGRVMRERLAPM--AEILRLADLSPL 38 (267)
T ss_dssp EEEEEESTTSHHHHHHHHHTGGG--EEEEEEEESSCC
T ss_pred CEEEEECCCCHHHHHHHHHHHhc--CCEEEEEecCCc
Confidence 4577888 699999999999999 999999999864
No 482
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=93.84 E-value=0.13 Score=48.09 Aligned_cols=41 Identities=17% Similarity=0.153 Sum_probs=34.5
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHc
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNS 44 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~ 44 (362)
.+|.|+|+|.+|+..+..+... |.+|+++++++++.+.+++
T Consensus 191 ~~VlV~G~G~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~ 231 (363)
T 3uog_A 191 DRVVVQGTGGVALFGLQIAKAT--GAEVIVTSSSREKLDRAFA 231 (363)
T ss_dssp CEEEEESSBHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHc--CCEEEEEecCchhHHHHHH
Confidence 3789999999998777666666 8999999999999887765
No 483
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=93.84 E-value=0.44 Score=42.60 Aligned_cols=40 Identities=20% Similarity=0.120 Sum_probs=34.5
Q ss_pred ceEEEEcC-ChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHH
Q 017997 2 VKICCIGA-GYVGGPTMAVIALKCPSIEVAVVDISVSRINAWN 43 (362)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~ 43 (362)
++|.|.|. |.+|..++..|++. |++|+++++++++++.+.
T Consensus 29 k~vlITGasggIG~~la~~l~~~--G~~V~~~~r~~~~~~~~~ 69 (286)
T 1xu9_A 29 KKVIVTGASKGIGREMAYHLAKM--GAHVVVTARSKETLQKVV 69 (286)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHH
Confidence 35777775 99999999999999 999999999998877654
No 484
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=93.84 E-value=0.43 Score=46.21 Aligned_cols=41 Identities=15% Similarity=0.368 Sum_probs=36.5
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcC
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSD 45 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~ 45 (362)
.+|.|+|.|.+|..+|..|.+ +++|.+++.|+++++.+.+.
T Consensus 236 ~~v~I~GgG~ig~~lA~~L~~---~~~v~iIE~d~~r~~~la~~ 276 (461)
T 4g65_A 236 RRIMIVGGGNIGASLAKRLEQ---TYSVKLIERNLQRAEKLSEE 276 (461)
T ss_dssp CEEEEECCSHHHHHHHHHHTT---TSEEEEEESCHHHHHHHHHH
T ss_pred cEEEEEcchHHHHHHHHHhhh---cCceEEEecCHHHHHHHHHH
Confidence 479999999999999998854 69999999999999998763
No 485
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=93.83 E-value=0.057 Score=48.95 Aligned_cols=34 Identities=26% Similarity=0.404 Sum_probs=31.3
Q ss_pred ceEEEEcC-ChhHHHHHHHHHHcCCCCeEEEEeCCHH
Q 017997 2 VKICCIGA-GYVGGPTMAVIALKCPSIEVAVVDISVS 37 (362)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~la~~~~G~~V~~~d~~~~ 37 (362)
|+|.|.|. |++|..++..|++. |++|+++++++.
T Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~ 42 (321)
T 3vps_A 8 HRILITGGAGFIGGHLARALVAS--GEEVTVLDDLRV 42 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCCEEEECCCSS
T ss_pred CeEEEECCCChHHHHHHHHHHHC--CCEEEEEecCCc
Confidence 68999997 99999999999999 999999999754
No 486
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=93.82 E-value=0.46 Score=41.30 Aligned_cols=40 Identities=15% Similarity=0.182 Sum_probs=34.0
Q ss_pred eEEEEc-CChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHc
Q 017997 3 KICCIG-AGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNS 44 (362)
Q Consensus 3 kI~VIG-lG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~ 44 (362)
++-|.| .|.+|..+|..|++. |++|+++++++++.+.+.+
T Consensus 16 ~vlITGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~ 56 (247)
T 3i1j_A 16 VILVTGAARGIGAAAARAYAAH--GASVVLLGRTEASLAEVSD 56 (247)
T ss_dssp EEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHH
T ss_pred EEEEeCCCChHHHHHHHHHHHC--CCEEEEEecCHHHHHHHHH
Confidence 466667 589999999999999 9999999999988776543
No 487
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=93.81 E-value=0.81 Score=39.92 Aligned_cols=38 Identities=16% Similarity=0.167 Sum_probs=32.9
Q ss_pred eEEEEc-CChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHH
Q 017997 3 KICCIG-AGYVGGPTMAVIALKCPSIEVAVVDISVSRINAW 42 (362)
Q Consensus 3 kI~VIG-lG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l 42 (362)
+|.|.| .|.+|..++..|++. |++|+++++++++.+.+
T Consensus 15 ~vlItGasggiG~~la~~l~~~--G~~V~~~~r~~~~~~~~ 53 (260)
T 3awd_A 15 VAIVTGGAQNIGLACVTALAEA--GARVIIADLDEAMATKA 53 (260)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHH
T ss_pred EEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHH
Confidence 577776 599999999999999 99999999998876654
No 488
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=93.79 E-value=0.41 Score=43.99 Aligned_cols=110 Identities=16% Similarity=0.202 Sum_probs=65.6
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHcCCCCCCCCChHHHHhhhcCCCEEE-ecCHHhhh----
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFF-STDVEKHV---- 76 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~~~~~~~e~~l~~~~~~~~~~~l~~-t~d~~~a~---- 76 (362)
.+|..||+|.-+. +..+++..++.+|+++|++++.++..++..... ..+++ ..++++ ..|..+.+
T Consensus 118 ~~VLdiG~G~G~~--~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~-~~~~~-------~~~v~~~~~D~~~~l~~~~ 187 (321)
T 2pt6_A 118 KNVLVVGGGDGGI--IRELCKYKSVENIDICEIDETVIEVSKIYFKNI-SCGYE-------DKRVNVFIEDASKFLENVT 187 (321)
T ss_dssp CEEEEEECTTCHH--HHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTT-SGGGG-------STTEEEEESCHHHHHHHCC
T ss_pred CEEEEEcCCccHH--HHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhh-ccccC-------CCcEEEEEccHHHHHhhcC
Confidence 4799999998654 445555534679999999999998776532111 00010 123443 34543322
Q ss_pred cCCcEEEEeccCCCCCCCCCCCCCCChHHHHHHHHHHHhhcCCCCEEEEeeCC
Q 017997 77 SEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTV 129 (362)
Q Consensus 77 ~~aDvVii~vptp~~~~g~~~~~~~d~~~l~~~~~~i~~~l~~~~iVv~~STv 129 (362)
...|+|++..+.|... ..++ +-.+.++.+.+.|+++.+++..+..
T Consensus 188 ~~fDvIi~d~~~p~~~-------~~~l-~~~~~l~~~~~~LkpgG~lv~~~~~ 232 (321)
T 2pt6_A 188 NTYDVIIVDSSDPIGP-------AETL-FNQNFYEKIYNALKPNGYCVAQCES 232 (321)
T ss_dssp SCEEEEEEECCCSSSG-------GGGG-SSHHHHHHHHHHEEEEEEEEEEECC
T ss_pred CCceEEEECCcCCCCc-------chhh-hHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 3579999876544321 0011 0156778888899988877665543
No 489
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=93.79 E-value=0.056 Score=51.13 Aligned_cols=33 Identities=30% Similarity=0.393 Sum_probs=30.8
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCH
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISV 36 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~ 36 (362)
|+|.|||.|..|+..|..|++. |++|++++.+.
T Consensus 4 ~~v~iiG~G~~Gl~~A~~l~~~--g~~v~v~E~~~ 36 (384)
T 2bi7_A 4 KKILIVGAGFSGAVIGRQLAEK--GHQVHIIDQRD 36 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT--TCEEEEEESSS
T ss_pred CCEEEECcCHHHHHHHHHHHHC--CCcEEEEEecC
Confidence 6899999999999999999998 99999999864
No 490
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=93.78 E-value=0.1 Score=45.87 Aligned_cols=40 Identities=15% Similarity=0.164 Sum_probs=34.2
Q ss_pred eEEEEc-CChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHc
Q 017997 3 KICCIG-AGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNS 44 (362)
Q Consensus 3 kI~VIG-lG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~ 44 (362)
+|-|.| .|.+|..+|..|++. |++|++.|+++++.+.+.+
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~ 44 (247)
T 3dii_A 4 GVIVTGGGHGIGKQICLDFLEA--GDKVCFIDIDEKRSADFAK 44 (247)
T ss_dssp EEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHT
T ss_pred EEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH
Confidence 455666 589999999999999 9999999999988877654
No 491
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=93.73 E-value=0.27 Score=46.01 Aligned_cols=40 Identities=25% Similarity=0.282 Sum_probs=33.3
Q ss_pred eEEEEcCChhHHHHHHHHHHcCCCC-eEEEEeCCHHHHHHHHc
Q 017997 3 KICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISVSRINAWNS 44 (362)
Q Consensus 3 kI~VIGlG~~G~~lA~~la~~~~G~-~V~~~d~~~~~~~~l~~ 44 (362)
+|.|+|+|.+|...+..+... |. +|+++|+++++.+.+++
T Consensus 193 ~VlV~GaG~vG~~a~qlak~~--Ga~~Vi~~~~~~~~~~~a~~ 233 (371)
T 1f8f_A 193 SFVTWGAGAVGLSALLAAKVC--GASIIIAVDIVESRLELAKQ 233 (371)
T ss_dssp EEEEESCSHHHHHHHHHHHHH--TCSEEEEEESCHHHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHc--CCCeEEEECCCHHHHHHHHH
Confidence 689999999999776665556 77 69999999999887765
No 492
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=93.72 E-value=0.11 Score=45.25 Aligned_cols=41 Identities=17% Similarity=0.210 Sum_probs=35.5
Q ss_pred ceEEEEcC-ChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHc
Q 017997 2 VKICCIGA-GYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNS 44 (362)
Q Consensus 2 mkI~VIGl-G~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~ 44 (362)
++|.|.|. |.+|..++..|++. |++|++++++++..+.+.+
T Consensus 8 ~~vlVTGasggiG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~ 49 (244)
T 1cyd_A 8 LRALVTGAGKGIGRDTVKALHAS--GAKVVAVTRTNSDLVSLAK 49 (244)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH
Confidence 46888875 99999999999999 9999999999988776543
No 493
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=93.69 E-value=0.55 Score=40.87 Aligned_cols=40 Identities=20% Similarity=0.135 Sum_probs=33.8
Q ss_pred ceEEEEc-CChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHH
Q 017997 2 VKICCIG-AGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWN 43 (362)
Q Consensus 2 mkI~VIG-lG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~ 43 (362)
++|.|.| .|.+|..++..|++. |++|++.+++++..+.+.
T Consensus 12 ~~vlVtGasggiG~~la~~l~~~--G~~V~~~~r~~~~~~~~~ 52 (255)
T 1fmc_A 12 KCAIITGAGAGIGKEIAITFATA--GASVVVSDINADAANHVV 52 (255)
T ss_dssp CEEEETTTTSHHHHHHHHHHHTT--TCEEEEEESCHHHHHHHH
T ss_pred CEEEEECCccHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHH
Confidence 3577777 599999999999999 999999999988766543
No 494
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=93.69 E-value=0.38 Score=45.15 Aligned_cols=40 Identities=20% Similarity=0.167 Sum_probs=33.9
Q ss_pred eEEEEcCChhHHHHHHHHHHcCCC-CeEEEEeCCHHHHHHHHc
Q 017997 3 KICCIGAGYVGGPTMAVIALKCPS-IEVAVVDISVSRINAWNS 44 (362)
Q Consensus 3 kI~VIGlG~~G~~lA~~la~~~~G-~~V~~~d~~~~~~~~l~~ 44 (362)
+|.|+|+|.+|+..++.+... | .+|+++++++++.+.+++
T Consensus 198 ~VlV~GaG~vG~~aiqlak~~--Ga~~Vi~~~~~~~~~~~~~~ 238 (380)
T 1vj0_A 198 TVVIQGAGPLGLFGVVIARSL--GAENVIVIAGSPNRLKLAEE 238 (380)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--TBSEEEEEESCHHHHHHHHH
T ss_pred EEEEECcCHHHHHHHHHHHHc--CCceEEEEcCCHHHHHHHHH
Confidence 689999999999776665555 8 699999999999988775
No 495
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=93.67 E-value=0.048 Score=51.70 Aligned_cols=33 Identities=24% Similarity=0.411 Sum_probs=30.4
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCH
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISV 36 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~ 36 (362)
++|.|||.|..|+.+|..|++. |++|+++++++
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~~--G~~V~v~E~~~ 38 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNKS--GFKVKIVEKQK 38 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHTT--TCCEEEECSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhC--CCCEEEEeCCC
Confidence 3799999999999999999998 99999999863
No 496
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=93.65 E-value=0.56 Score=40.60 Aligned_cols=39 Identities=18% Similarity=0.107 Sum_probs=33.1
Q ss_pred eEEEEc-CChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHH
Q 017997 3 KICCIG-AGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWN 43 (362)
Q Consensus 3 kI~VIG-lG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~ 43 (362)
+|.|.| .|.+|..++..|++. |++|+++++++++.+.+.
T Consensus 9 ~vlVtGasggiG~~la~~l~~~--G~~V~~~~r~~~~~~~~~ 48 (248)
T 2pnf_A 9 VSLVTGSTRGIGRAIAEKLASA--GSTVIITGTSGERAKAVA 48 (248)
T ss_dssp EEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHH
T ss_pred EEEEECCCchHHHHHHHHHHHC--CCEEEEEeCChHHHHHHH
Confidence 466666 699999999999999 999999999988776553
No 497
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=93.65 E-value=0.041 Score=51.80 Aligned_cols=34 Identities=18% Similarity=0.261 Sum_probs=31.3
Q ss_pred ceEEEEcCChhHHHHHHHHHHcCCCCeEEEEeCCHH
Q 017997 2 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVS 37 (362)
Q Consensus 2 mkI~VIGlG~~G~~lA~~la~~~~G~~V~~~d~~~~ 37 (362)
.+|.|||.|..|+.+|..|++. |++|+++|+++.
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~--G~~v~v~E~~~~ 36 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKA--GIDNVILERQTP 36 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH--TCCEEEECSSCH
T ss_pred ccEEEECCCHHHHHHHHHHHHC--CCCEEEEeCCCC
Confidence 3799999999999999999999 999999998754
No 498
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=93.65 E-value=0.094 Score=45.42 Aligned_cols=42 Identities=14% Similarity=0.147 Sum_probs=35.3
Q ss_pred CceEEEEc-CChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHc
Q 017997 1 MVKICCIG-AGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNS 44 (362)
Q Consensus 1 ~mkI~VIG-lG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~~ 44 (362)
|++|-|.| .|.+|..+|..|++. |++|++.++++++++.+.+
T Consensus 1 Mk~vlVTGas~gIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~ 43 (230)
T 3guy_A 1 MSLIVITGASSGLGAELAKLYDAE--GKATYLTGRSESKLSTVTN 43 (230)
T ss_dssp --CEEEESTTSHHHHHHHHHHHHT--TCCEEEEESCHHHHHHHHH
T ss_pred CCEEEEecCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH
Confidence 44577777 589999999999999 9999999999999887765
No 499
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=93.64 E-value=0.86 Score=39.74 Aligned_cols=39 Identities=21% Similarity=0.269 Sum_probs=33.3
Q ss_pred eEEEEc-CChhHHHHHHHHHHcCCCCeEEEEeCCHHHHHHHH
Q 017997 3 KICCIG-AGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWN 43 (362)
Q Consensus 3 kI~VIG-lG~~G~~lA~~la~~~~G~~V~~~d~~~~~~~~l~ 43 (362)
++.|.| .|.+|..+|..|++. |++|++.++++++.+.+.
T Consensus 9 ~~lVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~ 48 (247)
T 2jah_A 9 VALITGASSGIGEATARALAAE--GAAVAIAARRVEKLRALG 48 (247)
T ss_dssp EEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHH
Confidence 466666 689999999999999 999999999988776654
No 500
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=93.63 E-value=0.17 Score=46.99 Aligned_cols=40 Identities=20% Similarity=0.173 Sum_probs=32.4
Q ss_pred eEEEEcCChhHHHHHHHHHHcCCCC-eEEEEeCCHHHHHHHHc
Q 017997 3 KICCIGAGYVGGPTMAVIALKCPSI-EVAVVDISVSRINAWNS 44 (362)
Q Consensus 3 kI~VIGlG~~G~~lA~~la~~~~G~-~V~~~d~~~~~~~~l~~ 44 (362)
+|.|+|+|.+|+..++.+... |. +|+++|+++++.+.+++
T Consensus 169 ~VlV~GaG~vG~~a~qla~~~--Ga~~Vi~~~~~~~~~~~~~~ 209 (352)
T 3fpc_A 169 TVCVIGIGPVGLMSVAGANHL--GAGRIFAVGSRKHCCDIALE 209 (352)
T ss_dssp CEEEECCSHHHHHHHHHHHTT--TCSSEEEECCCHHHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHc--CCcEEEEECCCHHHHHHHHH
Confidence 689999999998665554444 87 89999999998887765
Done!