Query 017999
Match_columns 362
No_of_seqs 30 out of 32
Neff 2.9
Searched_HMMs 29240
Date Mon Mar 25 08:18:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017999.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017999hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tzt_A Glycosyl transferase fa 99.2 5.1E-11 1.7E-15 108.7 11.8 209 86-330 7-251 (276)
2 1ll2_A Glycogenin-1; protein-s 99.1 3.3E-10 1.1E-14 106.7 9.1 191 104-329 18-218 (333)
3 1g9r_A Glycosyl transferase; a 99.0 7.3E-10 2.5E-14 101.6 10.3 204 87-330 3-251 (311)
4 3u2u_A Glycogenin-1, GN-1, GN1 98.9 6.1E-10 2.1E-14 102.7 3.3 191 104-329 19-219 (263)
5 3ioh_A Histo-blood group ABO s 92.0 0.94 3.2E-05 43.7 10.3 130 57-195 23-165 (298)
6 1o7q_A N-acetyllactosaminide a 90.8 2 6.7E-05 41.3 11.2 207 88-330 48-281 (289)
7 4ayl_A BOGT-metal-independent 87.1 3.3 0.00011 38.9 9.7 90 97-196 9-106 (246)
8 2ns6_A Mobilization protein A; 76.8 5.6 0.00019 35.2 6.7 88 137-248 72-174 (185)
9 1xhb_A Polypeptide N-acetylgal 52.2 74 0.0025 29.8 9.4 87 88-193 31-130 (472)
10 4h08_A Putative hydrolase; GDS 42.6 97 0.0033 24.9 7.6 62 98-171 91-152 (200)
11 1qg8_A Protein (spore coat pol 39.3 58 0.002 27.0 5.9 88 105-208 16-123 (255)
12 2d7i_A Polypeptide N-acetylgal 37.5 2.1E+02 0.007 28.1 10.4 87 88-193 114-212 (570)
13 2vpt_A Lipolytic enzyme; ester 29.7 86 0.0029 25.7 5.4 24 102-125 104-127 (215)
14 2nxv_A ATP synthase subunits r 29.6 1.1E+02 0.0038 26.3 6.3 19 179-197 76-95 (249)
15 1fxw_F Alpha2, platelet-activa 28.7 1.6E+02 0.0056 24.3 7.0 72 98-193 111-182 (229)
16 3tov_A Glycosyl transferase fa 26.4 1.7E+02 0.0059 26.7 7.3 43 102-144 21-66 (349)
17 3dc7_A Putative uncharacterize 26.3 1.2E+02 0.0041 24.9 5.7 59 104-171 115-173 (232)
18 3bcv_A Putative glycosyltransf 25.9 1.8E+02 0.0061 23.6 6.7 17 288-304 209-225 (240)
19 3skv_A SSFX3; jelly roll, GDSL 25.5 90 0.0031 29.8 5.4 74 99-188 264-337 (385)
20 2ffu_A Ppgalnact-2, polypeptid 21.8 3.7E+02 0.013 25.4 8.9 87 88-193 68-162 (501)
21 1es9_A PAF-AH, platelet-activa 21.1 3.5E+02 0.012 22.2 8.7 72 98-193 110-181 (232)
22 2ctf_A Vigilin; K homology typ 20.4 86 0.003 24.9 3.6 31 219-249 66-96 (102)
No 1
>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} SCOP: c.68.1.0
Probab=99.23 E-value=5.1e-11 Score=108.72 Aligned_cols=209 Identities=16% Similarity=0.201 Sum_probs=114.1
Q ss_pred cceEecccccccchhhhHHHHHHHHHHHhhCCC--ccEEEEeCCCCCCCC---------CCCCeEEEecCCccCchhHHH
Q 017999 86 NMVTVGNASYSKTERSMAILNVFINFIQVTMPK--SDVFILTDPASDLSM---------PRKGVTIYPIHGEYSRDKLML 154 (362)
Q Consensus 86 ~~v~vg~~~y~k~~r~~avl~~Fi~sirvsmP~--snVVILTD~~T~~sl---------~~~r~~v~pi~g~YSR~~Lml 154 (362)
+.+...+..|- .-+-+-|.||...+|+ -.+.||+|.-++-.. .+-.+.++.++.+.=+..-..
T Consensus 7 ~I~~~~d~~Y~------~~~~v~i~Sl~~~~~~~~~~~~il~~~is~~~~~~L~~~~~~~~~~i~~~~~~~~~~~~~~~~ 80 (276)
T 3tzt_A 7 ALLLTLDENYI------PQMKVLMTSIYINNPGRIFDVYLIHSRISEDKLKDLGEDLKKFSYTLYPIRATDDLFSFAKVT 80 (276)
T ss_dssp EEEEECCGGGH------HHHHHHHHHHHHHSTTCCEEEEEEESCCCHHHHHHHHHHHHTTTCEEEEEECC----------
T ss_pred EEEEEeCHhHH------HHHHHHHHHHHHhCCCCceEEEEEeCCCCHHHHHHHHHHHHHcCCEEEEEEeCHHHHhcCccc
Confidence 44566677773 2345567899999994 466789987664321 122456676664221111112
Q ss_pred HHHHHHHHHHHHHHHHhccCCCccccEEEeecCeeeecCchhhhcc-CCCeeEEEe--ee-------------cCCCCcC
Q 017999 155 QRIRSYITFLERRIREHSQGQGHINHYVFTDSDIAVVDDLGHIFHD-YQNFHLALT--FR-------------NNKDQPL 218 (362)
Q Consensus 155 QRi~sYi~fLkT~i~e~~~~~~~i~dfIFiDsDiaVvDdLg~IFk~-~PdFHvALT--fR-------------nnkdqPi 218 (362)
+|+ +...|.+-.+.++- ++..+-.|++|+|++|.+||.++|+. ..+..+|.. .. +..+..+
T Consensus 81 ~~~-s~~~~~rl~~~~l~--p~~~~kvlylD~D~iv~~di~~L~~~dl~~~~~aav~d~~~~~~~~~~~~~~l~~~~~yf 157 (276)
T 3tzt_A 81 DRY-PKEMYYRLLAGEFL--PENLGEILYLDPDMLVINPLDDLLRTDISDYILAAASHTGKTDMANNVNRIRLGTDTDYY 157 (276)
T ss_dssp ----CHHHHHHHTHHHHS--CTTCCEEEEECSSEEECSCSHHHHTCCCTTSSEEEEEC--------------------CE
T ss_pred ccc-CHHHHHHHHHHHHc--ccccCeEEEEeCCeeecCCHHHHhhcCCCCCeEEEEEecccchHHHHHHHhcCCCCCCeE
Confidence 232 23445444455441 12468999999999999999999996 222234442 00 0123679
Q ss_pred cceEEEEeCCCCchhHHHHHHHHHHHHHHHhhhhHhhhhcchhhhhHHhhcCCCcchhcccccccccccccceEEEEeec
Q 017999 219 NSGFIAVRGTPDGISRAKIFLEEVLRVYSSKYMNASRMLGDQLALAWVVKSHPSFDARRFTKAQPFVEDIIGASVLFLPC 298 (362)
Q Consensus 219 NSGfIfVRgt~d~~~~A~~FLeeVleiY~sky~~as~mlGDQlALa~~vk~~~~~~~~~f~~~~af~~~v~g~sVlfLPC 298 (362)
||||+.+- .+ .-|...+.+++++... ++- .+-.+|||-.|+.+.+. .+..|||
T Consensus 158 NsGV~lin--l~-~~R~~~~~~~~~~~~~-~~~-~~~~~~DQd~LN~~f~~----------------------~~~~Lp~ 210 (276)
T 3tzt_A 158 NSGLLLIN--LK-RAREEIDPDEIFSFVE-DNH-MNLLLPDQDILNAMYGD----------------------RIYPLDD 210 (276)
T ss_dssp EEEEEEEE--HH-HHHHHCCHHHHHHHHH-HC---------CHHHHHHHGG----------------------GEEEEEH
T ss_pred EeeEEEEE--HH-HHHhhhHHHHHHHHHH-hcc-ccccCCChhHHHHHHhC----------------------CEEECCc
Confidence 99999995 22 1122334555544322 221 23457999999977631 3899999
Q ss_pred ccccCCCCCC-------CCcc--ccCCcceeEEeeeccchh
Q 017999 299 ATYNWTPPEG-------AGQF--HGMPLDVKVVHFKGSRKR 330 (362)
Q Consensus 299 ~~YNwtppeg-------aGQf--hgmPldvKVlHFKGsRKr 330 (362)
..|||.+-.. +++. .-.-.+.+||||-|+.|=
T Consensus 211 ~~wN~~~~~~~~~~~~~~~~~~~~~~~~~~~iiHy~g~~KP 251 (276)
T 3tzt_A 211 LIYNYDARNYSSYLIRSKKQADLAWLMDHTVVLHFCGRDKP 251 (276)
T ss_dssp HHHSEETTCHHHHHHHTTTCCSHHHHHHHCCEEECCSSCCT
T ss_pred hheeeecccchhhhccccchhhhhhhccCCeEEEECCCCCC
Confidence 9999985211 1110 001236899999998773
No 2
>1ll2_A Glycogenin-1; protein-substrate complex, beta-alpha-beta rossman-like NUCL binding fold, DXD motif, non-proline CIS peptide bond, TRAN; HET: UPG; 1.90A {Oryctolagus cuniculus} SCOP: c.68.1.14 PDB: 1ll3_A 1ll0_A 1zcv_A 1zcu_A 1zdf_A* 1zcy_A 1zdg_A*
Probab=99.06 E-value=3.3e-10 Score=106.67 Aligned_cols=191 Identities=21% Similarity=0.203 Sum_probs=110.6
Q ss_pred HHHHHHHHHHhhCCCccEEEEeCCCCCCC----CCCCCeEEEecCCccCc--hhHH-HHHHHHHHHHHHHHHHHhccCCC
Q 017999 104 ILNVFINFIQVTMPKSDVFILTDPASDLS----MPRKGVTIYPIHGEYSR--DKLM-LQRIRSYITFLERRIREHSQGQG 176 (362)
Q Consensus 104 vl~~Fi~sirvsmP~snVVILTD~~T~~s----l~~~r~~v~pi~g~YSR--~~Lm-lQRi~sYi~fLkT~i~e~~~~~~ 176 (362)
-+.+-+.||+..+|+..++||.++.-..+ |..-...+.+++.-.+. .++- ..|-.....|.|-.+.++ .
T Consensus 18 ~a~vl~~SL~~~~s~~~l~vlv~~~is~~~~~~L~~~~~~v~~v~~l~~~~~~~~~~~~~~~~~~t~~Kl~i~~l----~ 93 (333)
T 1ll2_A 18 GALVLGSSLKQHRTSRRLAVLTTPQVSDTMRKALEIVFDEVITVDILDSGDSAHLTLMKRPELGVTLTKLHCWSL----T 93 (333)
T ss_dssp HHHHHHHHHHHTTCCSEEEEEECTTSCHHHHHHHHHHCSEEEECCTTSTTSTTHHHHHHCGGGHHHHHHGGGGGC----T
T ss_pred HHHHHHHHHHHhCCCCCEEEEEcCCCCHHHHHHHHHhCCEEEEEeecCCcchhhcccccccchHHHHHHHHHhHh----c
Confidence 34567799999999999988876542111 11111245555432221 1221 112112234444444443 4
Q ss_pred ccccEEEeecCeeeecCchhhhccCCCeeEEEeeecCCCCcCcceEEEEeCCCCchhHHHHHHHHHHHHHHHhhhhHhhh
Q 017999 177 HINHYVFTDSDIAVVDDLGHIFHDYQNFHLALTFRNNKDQPLNSGFIAVRGTPDGISRAKIFLEEVLRVYSSKYMNASRM 256 (362)
Q Consensus 177 ~i~dfIFiDsDiaVvDdLg~IFk~~PdFHvALTfRnnkdqPiNSGfIfVRgt~d~~~~A~~FLeeVleiY~sky~~as~m 256 (362)
..+..|++|+|++|.+||.++|+.- .++-.-...-...+||||+.++ ++ .+.++++.+...+. .+-.
T Consensus 94 ~ydrvlYLDaD~lv~~di~eLf~~~---~~aAv~d~~~~~~fNsGvmlin--~~-----~~~~~~l~~~~~~~---~~~~ 160 (333)
T 1ll2_A 94 QYSKCVFMDADTLVLANIDDLFERE---ELSAAPDPGWPDCFNSGVFVYQ--PS-----VETYNQLLHVASEQ---GSFD 160 (333)
T ss_dssp TCSEEEEECTTEEECSCCGGGGGSC---SSEEEECSSSTTSEEEEEEEEC--CC-----HHHHHHHHHHHHHT---CCTT
T ss_pred CCCeEEEEeCCEEeccCHHHHhCCC---ceeEEecCCCCcceeeeEEEEe--CC-----HHHHHHHHHHHHhc---CCCC
Confidence 6689999999999999999999872 2232221112346999999997 32 23445555544321 2335
Q ss_pred hcchhhhhHHhhcCCCcchhcccccccccccccceEEEEeecccccCCCCCCC---CccccCCcceeEEeeeccch
Q 017999 257 LGDQLALAWVVKSHPSFDARRFTKAQPFVEDIIGASVLFLPCATYNWTPPEGA---GQFHGMPLDVKVVHFKGSRK 329 (362)
Q Consensus 257 lGDQlALa~~vk~~~~~~~~~f~~~~af~~~v~g~sVlfLPC~~YNwtppega---GQfhgmPldvKVlHFKGsRK 329 (362)
+|||-.|+.+.+.... .+ .+..||| .||+.+..+- ..+.-.+.++|||||-|+.|
T Consensus 161 ~~DQ~~LN~~f~~~~~-------------~~----~~~~Lp~-~yN~~~~~~~~~~p~~~~~~~~~~IiHf~g~~K 218 (333)
T 1ll2_A 161 GGDQGLLNTFFNSWAT-------------TD----IRKHLPF-IYNLSSISIYSYLPAFKAFGANAKVVHFLGQTK 218 (333)
T ss_dssp SSHHHHHHHHTTTTTT-------------SC----GGGBCCG-GGSEETTHHHHTHHHHHHHGGGCSEEECCSSCC
T ss_pred CCCHHHHHHHHHhhcc-------------cC----ccccCCc-HHhcccccchhccHHHHhhcCCCEEEEECCCCC
Confidence 7999999998753210 00 1246887 6998853210 01112356899999999654
No 3
>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A*
Probab=99.04 E-value=7.3e-10 Score=101.61 Aligned_cols=204 Identities=18% Similarity=0.284 Sum_probs=114.1
Q ss_pred ceEecccccccchhhhHHHHHHHHHHHhhCCCc--cEEEEeCCCCCCC------C---CCCCeEEEecCCc-cCchhHHH
Q 017999 87 MVTVGNASYSKTERSMAILNVFINFIQVTMPKS--DVFILTDPASDLS------M---PRKGVTIYPIHGE-YSRDKLML 154 (362)
Q Consensus 87 ~v~vg~~~y~k~~r~~avl~~Fi~sirvsmP~s--nVVILTD~~T~~s------l---~~~r~~v~pi~g~-YSR~~Lml 154 (362)
.+..++..| ..-+.+-+.|||+.+.+. .+.||||.-++-. + .+-.+.+++++.+ +..-..-.
T Consensus 3 I~~~~d~~Y------~~~~~vli~Sl~l~~~~~~~~f~il~~~ls~~~~~~L~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 76 (311)
T 1g9r_A 3 IVFAADDNY------AAYLCVAAKSVEAAHPDTEIRFHVLDAGISEANRAAVAANLRGGGGNIRFIDVNPEDFAGFPLNI 76 (311)
T ss_dssp EEEEECGGG------HHHHHHHHHHHHHTCTTSCCEEEEEESSCCHHHHHHHHHHSGGGTTTEEEEECCGGGGTTSCCCC
T ss_pred EEEECCHhH------HHHHHHHHHHHHHHcCCCCceEEEEECCCCHHHHHHHHHHHHHcCCEEEEEEcCHHHHhcCcccc
Confidence 344455555 223456788994434333 5678898754321 1 1234666666532 11000000
Q ss_pred HH--HHHHHHHHHHHHHHhccCCCccccEEEeecCeeeecCchhhhcc-CCCeeEEEe---eec------------CCCC
Q 017999 155 QR--IRSYITFLERRIREHSQGQGHINHYVFTDSDIAVVDDLGHIFHD-YQNFHLALT---FRN------------NKDQ 216 (362)
Q Consensus 155 QR--i~sYi~fLkT~i~e~~~~~~~i~dfIFiDsDiaVvDdLg~IFk~-~PdFHvALT---fRn------------nkdq 216 (362)
.+ ..+|.++ .|.++ ....+.+|++|+||+|.+||.++|+. ..+..+|.. +.+ +.+.
T Consensus 77 ~~~s~~~y~Rl---~l~~l---l~~~~kvlyLD~D~iv~~di~eL~~~~l~~~~~aav~d~~~~~~~~~~~~~~~~~~~~ 150 (311)
T 1g9r_A 77 RHISITTYARL---KLGEY---IADCDKVLYLDIDVLVRDSLTPLWDTDLGDNWLGASIDLFVERQEGYKQKIGMADGEY 150 (311)
T ss_dssp TTCCGGGGGGG---GHHHH---CCSCSCEEEECSSEEECSCCHHHHTCCCTTCSEEEEECHHHHTSTTHHHHTTCCTTSC
T ss_pred ccCCHHHHHHH---HHHHH---hhhcCEEEEEcCCeEeccCHHHHhccCCCCcEEEEEeccchhhhHHHHHhcCCCCCCc
Confidence 11 1233333 34443 13568999999999999999999997 344456653 110 2345
Q ss_pred cCcceEEEEeCCCCchhHHHHHHHHHHHHHHHhhhhHhhhhcchhhhhHHhhcCCCcchhcccccccccccccceEEEEe
Q 017999 217 PLNSGFIAVRGTPDGISRAKIFLEEVLRVYSSKYMNASRMLGDQLALAWVVKSHPSFDARRFTKAQPFVEDIIGASVLFL 296 (362)
Q Consensus 217 PiNSGfIfVRgt~d~~~~A~~FLeeVleiY~sky~~as~mlGDQlALa~~vk~~~~~~~~~f~~~~af~~~v~g~sVlfL 296 (362)
.+||||+.+. .+. -+...+.+++++... ++ ..+..++||-.|+.+... .+..|
T Consensus 151 yfNsGv~lin--l~~-~r~~~~~~~~~~~~~-~~-~~~~~~~DQd~lN~~f~~----------------------~~~~L 203 (311)
T 1g9r_A 151 YFNAGVLLIN--LKK-WRRHDIFKMSSEWVE-QY-KDVMQYQDQDILNGLFKG----------------------GVCYA 203 (311)
T ss_dssp CEEEEEEEEC--HHH-HTTSCHHHHHHHHHH-HH-TTTCSSHHHHHHHHHHTT----------------------SEEEE
T ss_pred eEeeeeeeee--HHH-HHhcchHHHHHHHHH-hc-cCcCccCCcCHHHHHHcC----------------------CEEEc
Confidence 7999999995 211 111223444443322 22 133568999999976631 37889
Q ss_pred ecccccCCCCCC-------CCc--------cccCCcceeEEeeeccchh
Q 017999 297 PCATYNWTPPEG-------AGQ--------FHGMPLDVKVVHFKGSRKR 330 (362)
Q Consensus 297 PC~~YNwtppeg-------aGQ--------fhgmPldvKVlHFKGsRKr 330 (362)
|| .||+.+... .|. +...+.++|||||-|+.|-
T Consensus 204 p~-~wN~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iiHy~g~~KP 251 (311)
T 1g9r_A 204 NS-RFNFMPTNYAFMANWFASRHTDPLYRDRTNTVMPVAVSHYCGPAKP 251 (311)
T ss_dssp CG-GGSBCHHHHHTCC----CSCCCHHHHHHHSCCSSCSEEECCSSCCT
T ss_pred Ch-hhccCcchhhHHhhhcccccchhhhhHHhhccCCCEEEEeCCcCCC
Confidence 99 599985311 111 1123458999999997664
No 4
>3u2u_A Glycogenin-1, GN-1, GN1; structural genomics, structural genomics consortium, SGC, transferase, glycosyltransferase, glycogen biosynthesis; HET: GLC UDP; 1.45A {Homo sapiens} SCOP: c.68.1.14 PDB: 3t7n_A* 3t7o_A* 3t7m_A* 3u2v_A* 3u2x_A* 3u2t_A 3rmv_A* 3rmw_A* 3u2w_A* 3qvb_A* 3q4s_A* 1zct_A* 3v8y_A 3v8z_A* 3usr_A 3v90_A 3v91_A* 3usq_A
Probab=98.88 E-value=6.1e-10 Score=102.70 Aligned_cols=191 Identities=21% Similarity=0.190 Sum_probs=110.9
Q ss_pred HHHHHHHHHHhhCCCccEEEEeCCC-CCCC---CCCCCeEEEecCCccCc--hhHH-HHHHHHHHHHHHHHHHHhccCCC
Q 017999 104 ILNVFINFIQVTMPKSDVFILTDPA-SDLS---MPRKGVTIYPIHGEYSR--DKLM-LQRIRSYITFLERRIREHSQGQG 176 (362)
Q Consensus 104 vl~~Fi~sirvsmP~snVVILTD~~-T~~s---l~~~r~~v~pi~g~YSR--~~Lm-lQRi~sYi~fLkT~i~e~~~~~~ 176 (362)
=+.+-+.||+..+++..++||.++. ++.. |......+.+++.--+. .++- .+|-.....|-|-.+-+ ..
T Consensus 19 ga~vL~~SL~~~~s~~~lvvLvt~~vs~~~~~~L~~~~~~vi~V~~l~~~~~~~~~~~~rp~~~~~~~kl~~~~----l~ 94 (263)
T 3u2u_A 19 GALVLGSSLKQHRTTRRLVVLATPQVSDSMRKVLETVFDEVIMVDVLDSGDSAHLTLMKRPELGVTLTKLHCWS----LT 94 (263)
T ss_dssp HHHHHHHHHHHTTCCSEEEEEECTTSCHHHHHHHHHHSSEEEECCCCCCCCHHHHHHTTCTTGGGGGGGGGGGG----CT
T ss_pred HHHHHHHHHHHhCCCCCEEEEecCCCCHHHHHHHHHcCCeEEEeeecCCcchhhhhhhcCcchhHHhHHHHhcc----cc
Confidence 3456779999999999888776543 3211 11112355666422221 1111 12201112333333332 24
Q ss_pred ccccEEEeecCeeeecCchhhhccCCCeeEEEeeecCCCCcCcceEEEEeCCCCchhHHHHHHHHHHHHHHHhhhhHhhh
Q 017999 177 HINHYVFTDSDIAVVDDLGHIFHDYQNFHLALTFRNNKDQPLNSGFIAVRGTPDGISRAKIFLEEVLRVYSSKYMNASRM 256 (362)
Q Consensus 177 ~i~dfIFiDsDiaVvDdLg~IFk~~PdFHvALTfRnnkdqPiNSGfIfVRgt~d~~~~A~~FLeeVleiY~sky~~as~m 256 (362)
..+..|++|+|++|.+|+.++|+.- .++-.-...-...+|||++.+. ++ ...+++..+.-.+. .+-.
T Consensus 95 ~~~~vlylD~D~~v~~~~~~Lf~~~---~~aA~~d~~~~~~fNsGv~li~--p~-----~~~~~~l~~~~~~~---~~~~ 161 (263)
T 3u2u_A 95 QYSKCVFMDADTLVLANIDDLFDRE---ELSAAPDPGWPDCFNSGVFVYQ--PS-----VETYNQLLHLASEQ---GSFD 161 (263)
T ss_dssp TCSEEEEECTTEEECSCCGGGGGSC---SSEEEECTTSTTSEEEEEEEEC--CC-----HHHHHHHHHHHHHH---CCTT
T ss_pred CcceEEEEcCCEeeccCHHHHhCCC---cceEeccCCCCccccCeEEEEc--cc-----HHHHHHHHHHHHhc---CCCC
Confidence 5689999999999999999999882 2333222222357999999996 43 35566666554432 3345
Q ss_pred hcchhhhhHHhhcCCCcchhcccccccccccccceEEEEeecccccCCCCCC---CCccccCCcceeEEeeeccch
Q 017999 257 LGDQLALAWVVKSHPSFDARRFTKAQPFVEDIIGASVLFLPCATYNWTPPEG---AGQFHGMPLDVKVVHFKGSRK 329 (362)
Q Consensus 257 lGDQlALa~~vk~~~~~~~~~f~~~~af~~~v~g~sVlfLPC~~YNwtppeg---aGQfhgmPldvKVlHFKGsRK 329 (362)
++||-.||.+.+.... + -.+..|| ..||+.+... .-.+...+.++|||||-|+.|
T Consensus 162 ~~DQd~LN~~f~~w~~----~-------------~~~~~Lp-~~yN~~~~~~y~~~~~~~~~~~~~~IIHf~g~~K 219 (263)
T 3u2u_A 162 GGDQGILNTFFSSWAT----T-------------DIRKHLP-FIYNLSSISIYSYLPAFKVFGASAKVVHFLGRVK 219 (263)
T ss_dssp SSHHHHHHHHTTTTTT----S-------------CGGGBCC-GGGSEEHHHHHSSHHHHHHHGGGCSEEECCSSSC
T ss_pred cccHHHHHHHhccccc----c-------------CeeEeCC-cccccccchhccccHHHHhhcCCeEEEEECCCCc
Confidence 7999999999864220 0 1235677 4688764210 001222356899999999765
No 5
>3ioh_A Histo-blood group ABO system transferase; GTA, cisab mutant, AA(Gly)B, rossman fold, unliganded, conformation, blood group antigen, glycoprotein; HET: GOL; 1.25A {Homo sapiens} SCOP: c.68.1.9 PDB: 3ioi_A* 3ioj_A* 3u0y_A* 3u0x_A* 1zhj_A* 2o1h_A* 2o1g_A* 3sx5_A* 3sx3_A* 2o1f_A 2rj6_A* 2rj5_A* 2rj7_A* 1zi4_A* 2y7a_A* 3sxb_A* 3sxa_A* 2riz_A 2rj0_A* 2rj1_A* ...
Probab=91.95 E-value=0.94 Score=43.67 Aligned_cols=130 Identities=19% Similarity=0.295 Sum_probs=81.0
Q ss_pred cCccceeeecccC----CCCCCCcccccccCcccceEecccccccchhhhHHHHHHHHHH-HhhCCCccEE--EEeCCCC
Q 017999 57 RQKFDHLILGPAA----GQRLPNRLQCQDSRASNMVTVGNASYSKTERSMAILNVFINFI-QVTMPKSDVF--ILTDPAS 129 (362)
Q Consensus 57 ~~~~~~~~~~~aa----g~g~~~rlqc~~~~~~~~v~vg~~~y~k~~r~~avl~~Fi~si-rvsmP~snVV--ILTD~~T 129 (362)
+.++|.+++-|.- =.|-=|+--=+.---.-.+|||=. |=-++|=..-|.-|+.|. +..||+.+|+ |.||.-.
T Consensus 23 ~~r~dv~t~T~WlAPivWegtf~~~il~~~y~~~n~tIGl~-vfA~GkY~~fl~~Fl~SAek~Fm~g~~V~YYVFTD~~~ 101 (298)
T 3ioh_A 23 PCRKDVLVVTPWLAPIVWEGTFNIDILNEQFRLQNTTIGLT-VFAIKKYVAFLKLFLETAEKHFMVGHRVHYYVFTDQPA 101 (298)
T ss_dssp CSCSSSCCBCTTSCBEECTTSCCHHHHHHHHHHTTCEEEEE-EEECGGGGGGHHHHHHHHHHHBSTTSEEEEEEEESCGG
T ss_pred CCCCCeeeccCCcCcEeEcCcCCHHHHHHHHHHhCCcEEEE-EEEeCcHHHHHHHHHHhHHHhccCCceEEEEEEeCChh
Confidence 4577877776652 233322210000001134566543 445666677899999999 8899999775 7999876
Q ss_pred CC---CCC-CCCeEEEecCCccCc-hhHHHHHHHHHHHHHHHHHHHhccCCCccccEEE-eecCeeeecCch
Q 017999 130 DL---SMP-RKGVTIYPIHGEYSR-DKLMLQRIRSYITFLERRIREHSQGQGHINHYVF-TDSDIAVVDDLG 195 (362)
Q Consensus 130 ~~---sl~-~~r~~v~pi~g~YSR-~~LmlQRi~sYi~fLkT~i~e~~~~~~~i~dfIF-iDsDiaVvDdLg 195 (362)
.+ .+. +.+++|.+++. +.| ...-+.|.+..+.++++.+. ..-|||| .|.|+...++.|
T Consensus 102 ~vP~v~l~~~r~~~V~~v~~-~~~Wqd~sm~Rm~~i~~~~~~~~~-------~EvDyLfc~dvd~~F~~~vG 165 (298)
T 3ioh_A 102 AVPRVTLGTGRQLSVLEVRA-YKRWQDVSMRRMEMISDFCERRFL-------SEVDYLVCVDVDMEFRDHVG 165 (298)
T ss_dssp GSCCCCCCTTEEEEEEECCC-CSSHHHHHHHHHHHHHHHHHHTHH-------HHCSEEEEEESSEEECSCBC
T ss_pred hCCccccCCCCeEEEEEecc-ccCCccccHHHHHHHHHHHHHHHh-------hcCCEEEEecCCCeeccCcc
Confidence 54 232 34678999984 554 22345676666677766543 3346665 699999988655
No 6
>1o7q_A N-acetyllactosaminide alpha-1,3- galactosyltransferase; 3-galactosyltransferase-UDP complex, glycosyltransferase, glycoprotein, transmembrane; HET: GAL NAG UDP; 1.3A {Bos taurus} SCOP: c.68.1.9 PDB: 1gwv_A* 1gx0_A* 1gww_A* 1k4v_A* 1gx4_A* 2jco_A 1g8o_A* 1fg5_N* 1g93_A* 2wgz_A* 1o7o_A* 2vs4_A* 2jck_A* 2jcl_A 2vfz_A* 2vs3_A* 1vzu_A* 1vzx_A* 1vzt_A* 2jcj_A* ...
Probab=90.79 E-value=2 Score=41.30 Aligned_cols=207 Identities=19% Similarity=0.315 Sum_probs=112.6
Q ss_pred eEecccccccchhhh-HHHHHHHHHH-HhhCCCccEE--EEeCCCCCC---CCCCC-CeEEEecCCccCch-hHHHHHHH
Q 017999 88 VTVGNASYSKTERSM-AILNVFINFI-QVTMPKSDVF--ILTDPASDL---SMPRK-GVTIYPIHGEYSRD-KLMLQRIR 158 (362)
Q Consensus 88 v~vg~~~y~k~~r~~-avl~~Fi~si-rvsmP~snVV--ILTD~~T~~---sl~~~-r~~v~pi~g~YSR~-~LmlQRi~ 158 (362)
+|||= .|=-++|=. .-|.-|+.|. +-.||+.+|+ |.||.-..+ .+.+. +.+|..|+. +.|= ..-+.|.+
T Consensus 48 ~tIGl-~vfa~GkY~~~fl~~Fl~SAEk~Fm~g~~v~YYVFTD~~~~~p~v~l~~~r~~~V~~i~~-~~~W~d~sm~Rm~ 125 (289)
T 1o7q_A 48 ITVGL-TVFAVGRYIEHYLEEFLTSANKHFMVGHPVIFYIMVDDVSRMPLIELGPLRSFKVFKIKP-EKRWQDISMMRMK 125 (289)
T ss_dssp CCEEE-EEEECTTHHHHHHHHHHHHHHHHBSTTSCEEEEEEESCGGGCCCCCCCTTEEEEEEECCC-CSSHHHHHHHHHH
T ss_pred CeEEE-EEEEecccHHHHHHHHHHHHHHhccCCCeEEEEEEeCChhhCCccccCCCCeEEEEEecc-ccCCchhHHHHHH
Confidence 45543 344566667 8899999999 8889999886 899987754 33333 479999884 5542 22344555
Q ss_pred HHHHHHHHHHHHhccCCCccccEEE-eecCeeeecCchhhhccCCCeeEEE-------------ee-ecCCC---CcCcc
Q 017999 159 SYITFLERRIREHSQGQGHINHYVF-TDSDIAVVDDLGHIFHDYQNFHLAL-------------TF-RNNKD---QPLNS 220 (362)
Q Consensus 159 sYi~fLkT~i~e~~~~~~~i~dfIF-iDsDiaVvDdLg~IFk~~PdFHvAL-------------Tf-Rnnkd---qPiNS 220 (362)
....++++.+. ..-|||| .|.|+.+.++.|.-.-- + -+|. || ||.+- .|..-
T Consensus 126 ~i~~~~~~~~~-------~evDYLf~~dvd~~F~~~vG~E~Lg--~-lv~~lHp~~y~~~~~~fpYERrp~S~AyIp~~e 195 (289)
T 1o7q_A 126 TIGEHIVAHIQ-------HEVDFLFCMDVDQVFQDKFGVETLG--E-SVAQLQAWWYKADPNDFTYERRKESAAYIPFGE 195 (289)
T ss_dssp HHHHHHHHTHH-------HHCSEEEEECSSEEECSCBCGGGCS--S-EEEEECTTTTTSCGGGSCCCCCTTSTTCCCTTC
T ss_pred HHHHHHHHHHh-------hcCCEEEEeeCCcEeeccCCHHHHH--H-HHHccCHHHhCCCCCCCCCCCCcCceeeecCCC
Confidence 55555544322 2246665 69999999887754321 2 2222 22 11111 23333
Q ss_pred eEEEEeCCCCchhHHHHHHHHHHHHHHHhhhhHhhhhcchhhhhHHhhcCCCcchhcccccccccccccceEEEEeeccc
Q 017999 221 GFIAVRGTPDGISRAKIFLEEVLRVYSSKYMNASRMLGDQLALAWVVKSHPSFDARRFTKAQPFVEDIIGASVLFLPCAT 300 (362)
Q Consensus 221 GfIfVRgt~d~~~~A~~FLeeVleiY~sky~~as~mlGDQlALa~~vk~~~~~~~~~f~~~~af~~~v~g~sVlfLPC~~ 300 (362)
|=..+-|.--| .+..++|+-..+|...- +..+ -..+--.|-.+||+ -|+ .=...-++| | ...
T Consensus 196 GdfYY~Ga~fG-Gt~~~vl~l~~~c~~~i-~~D~---~n~I~A~wHDESHL----NKY------f~~~KPtKv--L-SPE 257 (289)
T 1o7q_A 196 GDFYYHAAIFG-GTPTQVLNITQECFKGI-LKDK---KNDIEAQWHDESHL----NKY------FLLNKPTKI--L-SPE 257 (289)
T ss_dssp CSCCEEEEEEE-ECHHHHHHHHHHHHHHH-HHHH---HTTCCCTTTHHHHH----HHH------HHHSCCSEE--E-CGG
T ss_pred CCEEEEceeeC-CcHHHHHHHHHHHHHHH-HHHH---hCCeEEEecchhhh----hHH------HhhcCCCEE--E-CHH
Confidence 33333222211 12566776666555322 2111 11123356667776 222 111122343 2 467
Q ss_pred ccCCCCCCCCccccCCcceeEEeeeccchh
Q 017999 301 YNWTPPEGAGQFHGMPLDVKVVHFKGSRKR 330 (362)
Q Consensus 301 YNwtppegaGQfhgmPldvKVlHFKGsRKr 330 (362)
|+|- |+- +.|.++|++-|..--|.
T Consensus 258 Y~wd--~~~----~~p~~ik~~r~~~~~k~ 281 (289)
T 1o7q_A 258 YCWD--YHI----GLPADIKLVKMSWQTKE 281 (289)
T ss_dssp GSBC--GGG----CCCTTCCSCSEEECCCC
T ss_pred HCCC--ccc----CCCccccEEEEEEeccc
Confidence 9996 222 45888888877765554
No 7
>4ayl_A BOGT-metal-independent glycosyltransferase; histo-blood group enzyme; HET: EPE; 1.92A {Bacteroides ovatus} PDB: 4ayj_A*
Probab=87.08 E-value=3.3 Score=38.93 Aligned_cols=90 Identities=12% Similarity=0.197 Sum_probs=59.4
Q ss_pred cchhhhHHHHHHHHHH-HhhCCCcc--EE--EEeCCCCCCCCC-CCCeEEEecCCccCc-hhHHHHHHHHHHHHHHHHHH
Q 017999 97 KTERSMAILNVFINFI-QVTMPKSD--VF--ILTDPASDLSMP-RKGVTIYPIHGEYSR-DKLMLQRIRSYITFLERRIR 169 (362)
Q Consensus 97 k~~r~~avl~~Fi~si-rvsmP~sn--VV--ILTD~~T~~sl~-~~r~~v~pi~g~YSR-~~LmlQRi~sYi~fLkT~i~ 169 (362)
-++|=..-|.-|+.|. +..||+.+ |+ |.||.-..+... +.++.+. ++ ++.| ...-+.|.+..+.+ ++.|.
T Consensus 9 A~GkY~~fl~~Fl~SAek~Fm~g~~~~V~yYVFTD~~~~vp~~~~~~v~~~-~~-~~~~Wqd~sm~Rm~~i~~~-~~~~~ 85 (246)
T 4ayl_A 9 CTGKYDIFWKDFYLSAERYFMQDQSFIIEYYVFTDSPKLYDEENNKHIHRI-KQ-KNLGWPDNTLKRFHIFLRI-KEQLE 85 (246)
T ss_dssp CCGGGGGGHHHHHHHHHHHBSCSTTSEEEEEEEESCSCCTTTTTCTTEEEE-EC-CCCCTTHHHHTHHHHHHTT-HHHHH
T ss_pred EeCcHHHHHHHHHHhHHHhccCCCccceEEEEEeCChhhCCcCCCceEEEE-eC-CcCCCcccchHHHHHHHHH-HHHHH
Confidence 3445556799999999 88999999 65 799988876433 4444443 34 4443 22335566666665 55554
Q ss_pred HhccCCCccccEEE-eecCeeeecCchh
Q 017999 170 EHSQGQGHINHYVF-TDSDIAVVDDLGH 196 (362)
Q Consensus 170 e~~~~~~~i~dfIF-iDsDiaVvDdLg~ 196 (362)
..-|||| .|.|+...++.|.
T Consensus 86 -------~evDyLf~~dvd~~F~~~vG~ 106 (246)
T 4ayl_A 86 -------RETDYLFFFNANLLFTSPIGK 106 (246)
T ss_dssp -------HHCSEEEEECTTEEECSCBCG
T ss_pred -------hhCCEEEEEeCCceeeccCCH
Confidence 3246665 6999999988773
No 8
>2ns6_A Mobilization protein A; nickase, 5-strand antiparallel beta sheet, metalloenzyme, hydrolase; 2.10A {Pseudomonas aeruginosa}
Probab=76.77 E-value=5.6 Score=35.16 Aligned_cols=88 Identities=14% Similarity=0.148 Sum_probs=53.2
Q ss_pred CeEEEecCCccCchhHHHHHHHHHHHHHHHHHHHhccCCCccccEEEeecCeeeecCchhhhccCCCeeEEEeeecCCC-
Q 017999 137 GVTIYPIHGEYSRDKLMLQRIRSYITFLERRIREHSQGQGHINHYVFTDSDIAVVDDLGHIFHDYQNFHLALTFRNNKD- 215 (362)
Q Consensus 137 r~~v~pi~g~YSR~~LmlQRi~sYi~fLkT~i~e~~~~~~~i~dfIFiDsDiaVvDdLg~IFk~~PdFHvALTfRnnkd- 215 (362)
|-.++..|.+.|+ -|| +..+..-++++....+.+ +|.+|-+| -+.-||.||.+|.|-..+
T Consensus 72 re~~iALP~EL~~----eq~----~~L~~~f~~~~~~~~G~~-------~d~AIH~~----~~~NpHaHim~t~R~~dg~ 132 (185)
T 2ns6_A 72 KEVEFALPVELTL----DQQ----KALASEFAQHLTGAERLP-------YTLAIHAG----GGENPHCHLMISERINDGI 132 (185)
T ss_dssp EEEEEECCTTSCH----HHH----HHHHHHHHHHHHTTTTCC-------EEEEEEEE----TTTEEEEEEEECCBCCCSC
T ss_pred EEEEEECCccCCH----HHH----HHHHHHHHHHHHHhcCCE-------EEEEEEcC----CCCCceEEEEEeecccccc
Confidence 3478899999999 888 555555555442222333 34445442 137899999999875332
Q ss_pred --------------CcCcceEEEEeCCCCchhHHHHHHHHHHHHHHH
Q 017999 216 --------------QPLNSGFIAVRGTPDGISRAKIFLEEVLRVYSS 248 (362)
Q Consensus 216 --------------qPiNSGfIfVRgt~d~~~~A~~FLeeVleiY~s 248 (362)
.|..+|-.-.++ -..+.++++|-+.|-.
T Consensus 133 ~r~~~~~~~~~n~k~~~~gg~~k~~~-----w~~k~~l~~~R~~Wa~ 174 (185)
T 2ns6_A 133 ERPAAQWFKRYNGKTPEKGGAQKTEA-----LKPKAWLEQTREAWAD 174 (185)
T ss_dssp CCCHHHHTSCCCSSCGGGSCCCBCCT-----TCSTTHHHHHHHHHHH
T ss_pred ccchhhHhhhhcccccccCCCeeecc-----cCCHHHHHHHHHHHHH
Confidence 233444332221 1246789999999953
No 9
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=52.17 E-value=74 Score=29.75 Aligned_cols=87 Identities=13% Similarity=0.084 Sum_probs=46.4
Q ss_pred eEecccccccchhhhHHHHHHHHHHHhhC-CCc-cEEEEeCCCCCCC-CC----------CCCeEEEecCCccCchhHHH
Q 017999 88 VTVGNASYSKTERSMAILNVFINFIQVTM-PKS-DVFILTDPASDLS-MP----------RKGVTIYPIHGEYSRDKLML 154 (362)
Q Consensus 88 v~vg~~~y~k~~r~~avl~~Fi~sirvsm-P~s-nVVILTD~~T~~s-l~----------~~r~~v~pi~g~YSR~~Lml 154 (362)
|+|-=..|... ...|...+.||.... |.. .-||+.|++|... .. +.++++++.+.+... ..
T Consensus 31 vSVIIp~yN~~---~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~~l~~~~~~~~~~v~vi~~~~n~G~---~~ 104 (472)
T 1xhb_A 31 TSVVIVFHNEA---WSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYVKKLKVPVHVIRMEQRSGL---IR 104 (472)
T ss_dssp EEEEEEESSCC---HHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHHHHHSSSSCEEEEECSSCCCH---HH
T ss_pred eEEEEEeCCCC---HHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHHHHHHHHHHHCCCcEEEEECCCCCCh---HH
Confidence 44444556432 234555667775544 443 2466677776652 21 126889888765543 11
Q ss_pred HHHHHHHHHHHHHHHHhccCCCccccEEEeecCeeeecC
Q 017999 155 QRIRSYITFLERRIREHSQGQGHINHYVFTDSDIAVVDD 193 (362)
Q Consensus 155 QRi~sYi~fLkT~i~e~~~~~~~i~dfIFiDsDiaVvDd 193 (362)
.| + .-++ +| .-+-++|+|+|+.+..+
T Consensus 105 a~--N------~g~~-~A----~gd~i~flD~D~~~~p~ 130 (472)
T 1xhb_A 105 AR--L------KGAA-VS----RGQVITFLDAHCECTAG 130 (472)
T ss_dssp HH--H------HHHH-HC----CSSEEEEEESSEEECTT
T ss_pred HH--H------HHHH-hc----cCCeEEEECCCeEeCcc
Confidence 11 1 1122 11 23567799999887655
No 10
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron}
Probab=42.59 E-value=97 Score=24.91 Aligned_cols=62 Identities=13% Similarity=0.141 Sum_probs=37.9
Q ss_pred chhhhHHHHHHHHHHHhhCCCccEEEEeCCCCCCCCCCCCeEEEecCCccCchhHHHHHHHHHHHHHHHHHHHh
Q 017999 98 TERSMAILNVFINFIQVTMPKSDVFILTDPASDLSMPRKGVTIYPIHGEYSRDKLMLQRIRSYITFLERRIREH 171 (362)
Q Consensus 98 ~~r~~avl~~Fi~sirvsmP~snVVILTD~~T~~sl~~~r~~v~pi~g~YSR~~LmlQRi~sYi~fLkT~i~e~ 171 (362)
.+.-.+=+..+|..+|...|++.||++|=+-. ... +....+.+ ..++++.|-+.+++..+++
T Consensus 91 ~~~~~~~l~~ii~~l~~~~p~~~ii~~~~~P~----~~~-----~~~~~~~~---~~~~~~~~n~~~~~~a~~~ 152 (200)
T 4h08_A 91 EEEYDKSFPKLIKIIRKYAPKAKLIWANTTPV----RTG-----EGMKEFAP---ITERLNVRNQIALKHINRA 152 (200)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCEEEEECCCCC----EES-----GGGCEECT---HHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhhhCCCccEEEeccCCC----ccc-----ccccccch---hHHHHHHHHHHHHHHhhhc
Confidence 34455668899999999999999998763210 000 01111222 3567777777777665544
No 11
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=39.33 E-value=58 Score=26.96 Aligned_cols=88 Identities=14% Similarity=0.156 Sum_probs=46.8
Q ss_pred HHHHHHHH-HhhCCCccEEEEeCCCCCCCC-------CCCCeEEEecC--------CccCchhHHHHHHHHHHHHHHHHH
Q 017999 105 LNVFINFI-QVTMPKSDVFILTDPASDLSM-------PRKGVTIYPIH--------GEYSRDKLMLQRIRSYITFLERRI 168 (362)
Q Consensus 105 l~~Fi~si-rvsmP~snVVILTD~~T~~sl-------~~~r~~v~pi~--------g~YSR~~LmlQRi~sYi~fLkT~i 168 (362)
|..-+.|| +...|+.+|||.-|..|+-+. ...+++++..+ .+.. ....| ..-+
T Consensus 16 l~~~l~Sl~~q~~~~~eiivvDd~S~d~t~~~~~~~~~~~~i~~i~~~~~~~~~~~~n~G---~~~a~--------N~gi 84 (255)
T 1qg8_A 16 VAKSISSILSQTFSDFELFIMDDNSNEETLNVIRPFLNDNRVRFYQSDISGVKERTEKTR---YAALI--------NQAI 84 (255)
T ss_dssp HHHHHHHHHTCSCCCEEEEEEECSCCHHHHHHHGGGGGSTTEEEEECCCCSHHHHHSSCH---HHHHH--------HHHH
T ss_pred HHHHHHHHHhccCCceEEEEEECCCCchHHHHHHHHhhcCCEEEEecccccccccccccC---HHHHH--------HHHH
Confidence 44445555 456777777666555443221 13467888776 2221 12222 1122
Q ss_pred HHhccCCCccccEEEeecCeeeecC-ch---hhhccCCCeeEEE
Q 017999 169 REHSQGQGHINHYVFTDSDIAVVDD-LG---HIFHDYQNFHLAL 208 (362)
Q Consensus 169 ~e~~~~~~~i~dfIFiDsDiaVvDd-Lg---~IFk~~PdFHvAL 208 (362)
+ ++ .-+-++|+|+|..+..+ |. ..+++.|+..+..
T Consensus 85 ~-~a----~g~~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~v~ 123 (255)
T 1qg8_A 85 E-MA----EGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIY 123 (255)
T ss_dssp H-HC----CCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEEE
T ss_pred H-Hc----CCCEEEEeCCCCccChHHHHHHHHHHHhCCCceEEE
Confidence 2 11 23556799999998765 33 3445577766655
No 12
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=37.54 E-value=2.1e+02 Score=28.14 Aligned_cols=87 Identities=14% Similarity=0.032 Sum_probs=45.2
Q ss_pred eEecccccccchhhhHHHHHHHHHH-HhhCCCc-cEEEEeCCCCCCCC-C---------CCCeEEEecCCccCchhHHHH
Q 017999 88 VTVGNASYSKTERSMAILNVFINFI-QVTMPKS-DVFILTDPASDLSM-P---------RKGVTIYPIHGEYSRDKLMLQ 155 (362)
Q Consensus 88 v~vg~~~y~k~~r~~avl~~Fi~si-rvsmP~s-nVVILTD~~T~~sl-~---------~~r~~v~pi~g~YSR~~LmlQ 155 (362)
|+|==.+|... ...|..-|.|| +.+.|.. .-||+.|++|.... . ..++++++.+.+... ...
T Consensus 114 vSVIIp~yNe~---~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~~~l~~~~~~~~~v~vi~~~~n~G~---~~A 187 (570)
T 2d7i_A 114 TSIIIPFHNEG---WSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLEDYMALFPSVRILRTKKREGL---IRT 187 (570)
T ss_dssp EEEEEEESSCC---HHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGTHHHHHHHTTSTTEEEEECSSCCCH---HHH
T ss_pred eEEEEEECCCC---HHHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHHHHHHHHHHHhCCeEEEEECCCCCCH---HHH
Confidence 44444555432 34444555666 4455544 14556666655433 1 136888888755443 112
Q ss_pred HHHHHHHHHHHHHHHhccCCCccccEEEeecCeeeecC
Q 017999 156 RIRSYITFLERRIREHSQGQGHINHYVFTDSDIAVVDD 193 (362)
Q Consensus 156 Ri~sYi~fLkT~i~e~~~~~~~i~dfIFiDsDiaVvDd 193 (362)
| -.-++ +| .-+-++|+|+|+.+..+
T Consensus 188 ~--------N~G~~-~A----~gd~i~fLD~D~~~~p~ 212 (570)
T 2d7i_A 188 R--------MLGAS-VA----TGDVITFLDSHCEANVN 212 (570)
T ss_dssp H--------HHHHH-HC----CSSEEEECCSSEEECTT
T ss_pred H--------HHHHH-hc----CCCEEEEEcCCcccccc
Confidence 1 11122 11 23567899999988654
No 13
>2vpt_A Lipolytic enzyme; esterase, hydrolase; 1.40A {Clostridium thermocellum}
Probab=29.71 E-value=86 Score=25.70 Aligned_cols=24 Identities=21% Similarity=0.304 Sum_probs=20.4
Q ss_pred hHHHHHHHHHHHhhCCCccEEEEe
Q 017999 102 MAILNVFINFIQVTMPKSDVFILT 125 (362)
Q Consensus 102 ~avl~~Fi~sirvsmP~snVVILT 125 (362)
-+-+..+|..+|...|++.|++++
T Consensus 104 ~~~l~~li~~i~~~~p~~~ii~~~ 127 (215)
T 2vpt_A 104 ATGLSNLIDQIFTVKPNVTLFVAD 127 (215)
T ss_dssp HHHHHHHHHHHHHHCTTCEEEEEC
T ss_pred HHHHHHHHHHHHHhCCCCEEEEEe
Confidence 356788999999999999999876
No 14
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=29.57 E-value=1.1e+02 Score=26.27 Aligned_cols=19 Identities=21% Similarity=0.490 Sum_probs=13.7
Q ss_pred ccEEEeecCeeeecC-chhh
Q 017999 179 NHYVFTDSDIAVVDD-LGHI 197 (362)
Q Consensus 179 ~dfIFiDsDiaVvDd-Lg~I 197 (362)
+-++|+|.|+.+..+ |.++
T Consensus 76 ~yl~fln~D~~~~~~~l~~l 95 (249)
T 2nxv_A 76 RYVIFCHEDVELVDRGYDDL 95 (249)
T ss_dssp SEEEEEETTEECSSCCHHHH
T ss_pred CEEEEECCCcccCccHHHHH
Confidence 456699999999765 4433
No 15
>1fxw_F Alpha2, platelet-activating factor acetylhydrolase IB beta subunit; alpha beta hydrolase fold; 2.10A {Bos taurus} SCOP: c.23.10.3 PDB: 1vyh_A
Probab=28.75 E-value=1.6e+02 Score=24.34 Aligned_cols=72 Identities=13% Similarity=0.179 Sum_probs=42.8
Q ss_pred chhhhHHHHHHHHHHHhhCCCccEEEEeCCCCCCCCCCCCeEEEecCCccCchhHHHHHHHHHHHHHHHHHHHhccCCCc
Q 017999 98 TERSMAILNVFINFIQVTMPKSDVFILTDPASDLSMPRKGVTIYPIHGEYSRDKLMLQRIRSYITFLERRIREHSQGQGH 177 (362)
Q Consensus 98 ~~r~~avl~~Fi~sirvsmP~snVVILTD~~T~~sl~~~r~~v~pi~g~YSR~~LmlQRi~sYi~fLkT~i~e~~~~~~~ 177 (362)
.+.-.+-+..+|..||..+|+++|++++=+-.. .. .. -+.+++..|-+ .|+++++ .
T Consensus 111 ~~~~~~~l~~~i~~l~~~~p~~~iil~~~~p~~----~~----------~~---~~~~~~~~~n~----~l~~~a~---~ 166 (229)
T 1fxw_F 111 AEEVAGGIEAIVQLINTRQPQAKIIVLGLLPRG----EK----------PN---PLRQKNAKVNQ----LLKVSLP---K 166 (229)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCEEEEECCCCCS----SS----------CC---HHHHHHHHHHH----HHHHHSS---S
T ss_pred HHHHHHHHHHHHHHHHHHCCCCeEEEEeCCCCC----Cc----------hh---hHHHHHHHHHH----HHHHHHh---c
Confidence 455566788899999999999999987522111 00 00 12344444444 4444432 1
Q ss_pred cccEEEeecCeeeecC
Q 017999 178 INHYVFTDSDIAVVDD 193 (362)
Q Consensus 178 i~dfIFiDsDiaVvDd 193 (362)
..++.|+|...+..+.
T Consensus 167 ~~~v~~iD~~~~~~~~ 182 (229)
T 1fxw_F 167 LANVQLLDTDGGFVHS 182 (229)
T ss_dssp SSSEEEECCCCSCBCT
T ss_pred CCCeEEEeCHHHhhcc
Confidence 3578888887766553
No 16
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=26.38 E-value=1.7e+02 Score=26.66 Aligned_cols=43 Identities=16% Similarity=0.320 Sum_probs=30.5
Q ss_pred hHHHHH-HHHHHHhhCCCccEEEEeCCCCCCCCCCC-Ce-EEEecC
Q 017999 102 MAILNV-FINFIQVTMPKSDVFILTDPASDLSMPRK-GV-TIYPIH 144 (362)
Q Consensus 102 ~avl~~-Fi~sirvsmP~snVVILTD~~T~~sl~~~-r~-~v~pi~ 144 (362)
..|+.+ ++..||..+|++++.+|+.+.+.--+... .+ .+++++
T Consensus 21 D~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~~p~vd~vi~~~ 66 (349)
T 3tov_A 21 DVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEYNPNIDELIVVD 66 (349)
T ss_dssp HHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSSCTTCSEEEEEC
T ss_pred HHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcCCCccEEEEeC
Confidence 344444 78999999999999999999876433321 23 466665
No 17
>3dc7_A Putative uncharacterized protein LP_3323; NESG LPR109 X-RAY LP_3323, structural genomics, PSI-2, prote structure initiative; 2.12A {Lactobacillus plantarum} SCOP: c.23.10.9
Probab=26.32 E-value=1.2e+02 Score=24.90 Aligned_cols=59 Identities=8% Similarity=0.084 Sum_probs=37.0
Q ss_pred HHHHHHHHHHhhCCCccEEEEeCCCCCCCCCCCCeEEEecCCccCchhHHHHHHHHHHHHHHHHHHHh
Q 017999 104 ILNVFINFIQVTMPKSDVFILTDPASDLSMPRKGVTIYPIHGEYSRDKLMLQRIRSYITFLERRIREH 171 (362)
Q Consensus 104 vl~~Fi~sirvsmP~snVVILTD~~T~~sl~~~r~~v~pi~g~YSR~~LmlQRi~sYi~fLkT~i~e~ 171 (362)
=+..+|..+|..+|++.||++|=+.......+ +.+ .+. +-..++++.|-+.++...+++
T Consensus 115 ~l~~li~~l~~~~P~~~iil~~p~~~~~~~~~------~~~-~~~--~~~~~~~~~~~~~i~~~a~~~ 173 (232)
T 3dc7_A 115 ALMMLLTGLQTNWPTVPKLFISAIHIGSDFGG------SFS-AVT--NGLGYRQSDYEAAIAQMTADY 173 (232)
T ss_dssp HHHHHHHHHHHHCTTSCEEEEECCCCCSCSBT------TBC-SSC--CTTSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCeEEEEeCcccCCccCC------ccc-ccc--cccchHHHHHHHHHHHHHHHc
Confidence 67888999999999999999876544322111 111 111 122456677777777766655
No 18
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=25.94 E-value=1.8e+02 Score=23.63 Aligned_cols=17 Identities=29% Similarity=0.389 Sum_probs=8.6
Q ss_pred ccceEEEEeecccccCC
Q 017999 288 IIGASVLFLPCATYNWT 304 (362)
Q Consensus 288 v~g~sVlfLPC~~YNwt 304 (362)
-.|.++.++|-++|.|.
T Consensus 209 ~~g~~i~~~~~~~~~yr 225 (240)
T 3bcv_A 209 ANSNIVCVLPQTFYNYR 225 (240)
T ss_dssp TTCSCEEECC-------
T ss_pred HhCCEEEEECCCeEEEE
Confidence 46889999999999997
No 19
>3skv_A SSFX3; jelly roll, GDSL/SGNH fold, alpha/beta hydrolase fold, trans; 2.49A {Streptomyces SP}
Probab=25.47 E-value=90 Score=29.82 Aligned_cols=74 Identities=11% Similarity=0.035 Sum_probs=42.7
Q ss_pred hhhhHHHHHHHHHHHhhCCCccEEEEeCCCCCCCCCCCCeEEEecCCccCchhHHHHHHHHHHHHHHHHHHHhccCCCcc
Q 017999 99 ERSMAILNVFINFIQVTMPKSDVFILTDPASDLSMPRKGVTIYPIHGEYSRDKLMLQRIRSYITFLERRIREHSQGQGHI 178 (362)
Q Consensus 99 ~r~~avl~~Fi~sirvsmP~snVVILTD~~T~~sl~~~r~~v~pi~g~YSR~~LmlQRi~sYi~fLkT~i~e~~~~~~~i 178 (362)
+.-.+=+..||..||..+|++.||+++=+-.... +. .|. .. ...+..|.+-++..++++++. ..
T Consensus 264 ~~~~~~l~~li~~ir~~~P~a~Illv~p~~~P~~--~~------~p~-~~-----~~~l~~~~~~l~~~~~~lA~~--g~ 327 (385)
T 3skv_A 264 VDFPANLVGFVQIIRERHPLTPIVLGSSVYSPFW--DE------LPA-DD-----KPTVADYREQVVKVAELLRKH--GD 327 (385)
T ss_dssp TTHHHHHHHHHHHHHTTCSSSCEEEEECCCCTTT--TT------SCC-TT-----SCCHHHHHHHHHHHHHHHHHT--TC
T ss_pred HHHHHHHHHHHHHHHHHCCCCcEEEEcCCCCccc--cc------CCc-cc-----hhhHHHHHHHHHHHHHHHHhc--CC
Confidence 3444567888889999999999888875422111 00 010 00 123445667777777777532 13
Q ss_pred ccEEEeecCe
Q 017999 179 NHYVFTDSDI 188 (362)
Q Consensus 179 ~dfIFiDsDi 188 (362)
.+..|+|.+-
T Consensus 328 ~~v~~vd~~~ 337 (385)
T 3skv_A 328 QNVHYLDGMR 337 (385)
T ss_dssp TTEEEECHHH
T ss_pred CCEEEEecHH
Confidence 4667787643
No 20
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=21.77 E-value=3.7e+02 Score=25.39 Aligned_cols=87 Identities=16% Similarity=0.074 Sum_probs=42.7
Q ss_pred eEecccccccchhhhHHHHHHHHHHHh-hCCCc-cEEEEeCCCCCCCC-C-----CCCeEEEecCCccCchhHHHHHHHH
Q 017999 88 VTVGNASYSKTERSMAILNVFINFIQV-TMPKS-DVFILTDPASDLSM-P-----RKGVTIYPIHGEYSRDKLMLQRIRS 159 (362)
Q Consensus 88 v~vg~~~y~k~~r~~avl~~Fi~sirv-smP~s-nVVILTD~~T~~sl-~-----~~r~~v~pi~g~YSR~~LmlQRi~s 159 (362)
|+|==.+|...+- .|..-|.|+.. +.|.. .=||+.|++|.... . ..++++++.+.+... ...|
T Consensus 68 vSVIIp~yN~~~~---~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t~~~~~~~~~~v~vi~~~~n~G~---~~A~--- 138 (501)
T 2ffu_A 68 TSVVITFHNEARS---ALLRTVVSVLKKSPPHLIKEIILVDDYSNDPEDGALLGKIEKVRVLRNDRREGL---MRSR--- 138 (501)
T ss_dssp EEEEEEESSCCHH---HHHHHHHHHHHHSCGGGEEEEEEEECSCSCTHHHHGGGGBTTEEEEECSSCCHH---HHHH---
T ss_pred EEEEEEeCcCcHH---HHHHHHHHHHhhCchhhceeEEEEECCCCchHHHHHHhcCCCEEEEECCCCcCH---HHHH---
Confidence 4444445644321 44445566644 44443 24555666654431 1 235788887654332 1111
Q ss_pred HHHHHHHHHHHhccCCCccccEEEeecCeeeecC
Q 017999 160 YITFLERRIREHSQGQGHINHYVFTDSDIAVVDD 193 (362)
Q Consensus 160 Yi~fLkT~i~e~~~~~~~i~dfIFiDsDiaVvDd 193 (362)
-.-++ +| .-+-++|+|+|+.+..+
T Consensus 139 -----N~G~~-~A----~gd~i~flD~D~~~~p~ 162 (501)
T 2ffu_A 139 -----VRGAD-AA----QAKVLTFLDSHCECNEH 162 (501)
T ss_dssp -----HHHHH-HC----CSSEEEECCSSEEECTT
T ss_pred -----HHHHH-hc----CCCEEEEECCCcccCcc
Confidence 11122 11 23456789999887654
No 21
>1es9_A PAF-AH, platelet-activating factor acetylhydrolase IB gamma subunit; alpha/beta hydrolase fold; 1.30A {Bos taurus} SCOP: c.23.10.3 PDB: 1wab_A 1fxw_A 1bwr_A 1bwq_A 1bwp_A 3dt9_A* 3dt6_A* 3dt8_A*
Probab=21.10 E-value=3.5e+02 Score=22.22 Aligned_cols=72 Identities=13% Similarity=0.181 Sum_probs=47.0
Q ss_pred chhhhHHHHHHHHHHHhhCCCccEEEEeCCCCCCCCCCCCeEEEecCCccCchhHHHHHHHHHHHHHHHHHHHhccCCCc
Q 017999 98 TERSMAILNVFINFIQVTMPKSDVFILTDPASDLSMPRKGVTIYPIHGEYSRDKLMLQRIRSYITFLERRIREHSQGQGH 177 (362)
Q Consensus 98 ~~r~~avl~~Fi~sirvsmP~snVVILTD~~T~~sl~~~r~~v~pi~g~YSR~~LmlQRi~sYi~fLkT~i~e~~~~~~~ 177 (362)
.+.-.+-+..+|..+|..+|+++|++++=+-.... + . -..+++..|-+.|++.+. .
T Consensus 110 ~~~~~~~l~~~i~~l~~~~p~~~ii~~~~~p~~~~-----------~---~---~~~~~~~~~n~~l~~~~a-------~ 165 (232)
T 1es9_A 110 AEQVTGGIKAIVQLVNERQPQARVVVLGLLPRGQH-----------P---N---PLREKNRRVNELVRAALA-------G 165 (232)
T ss_dssp HHHHHHHHHHHHHHHHHHSTTCEEEEECCCCCSSS-----------C---C---HHHHHHHHHHHHHHHHHH-------S
T ss_pred HHHHHHHHHHHHHHHHHHCCCCeEEEecCCCCCCC-----------c---h---hHHHHHHHHHHHHHHHHh-------h
Confidence 45556778899999999999999999875422110 0 0 124566666666665433 2
Q ss_pred cccEEEeecCeeeecC
Q 017999 178 INHYVFTDSDIAVVDD 193 (362)
Q Consensus 178 i~dfIFiDsDiaVvDd 193 (362)
..++.|+|...+..+.
T Consensus 166 ~~~v~~iD~~~~~~~~ 181 (232)
T 1es9_A 166 HPRAHFLDADPGFVHS 181 (232)
T ss_dssp CTTEEEECCCCCCSCT
T ss_pred cCCCEEEeChHHhcCC
Confidence 3567888887766654
No 22
>2ctf_A Vigilin; K homology type I domain, RNA-binding, cell sterol metabolism, beta-alpha-alpha-beta-BETA-alpha structure, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.51.1.1
Probab=20.37 E-value=86 Score=24.85 Aligned_cols=31 Identities=16% Similarity=0.284 Sum_probs=27.2
Q ss_pred cceEEEEeCCCCchhHHHHHHHHHHHHHHHh
Q 017999 219 NSGFIAVRGTPDGISRAKIFLEEVLRVYSSK 249 (362)
Q Consensus 219 NSGfIfVRgt~d~~~~A~~FLeeVleiY~sk 249 (362)
+++.|-++|.++.+.+|+.-+++..+-+.++
T Consensus 66 ~~~~ItI~G~~~~V~~a~~~I~~~v~el~~~ 96 (102)
T 2ctf_A 66 GEDKITLEGPTEDVSVAQEQIEGMVKDLINR 96 (102)
T ss_dssp SSCEEEEEECHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCHHHHHHHHHHHHHHHHHHHhh
Confidence 4679999999999999999999988877655
Done!