Query 018003
Match_columns 362
No_of_seqs 370 out of 3557
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 08:21:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018003.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018003hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4e2x_A TCAB9; kijanose, tetron 99.9 7.5E-25 2.6E-29 211.3 13.9 170 165-352 95-268 (416)
2 1vl5_A Unknown conserved prote 99.9 4.3E-23 1.5E-27 186.2 18.2 166 166-342 26-191 (260)
3 4gek_A TRNA (CMO5U34)-methyltr 99.9 1.7E-22 5.9E-27 182.4 21.3 174 176-353 69-258 (261)
4 2o57_A Putative sarcosine dime 99.9 7.3E-22 2.5E-26 181.7 22.7 166 165-342 66-235 (297)
5 3dh0_A SAM dependent methyltra 99.9 5.2E-22 1.8E-26 174.3 20.7 166 167-353 27-194 (219)
6 3dtn_A Putative methyltransfer 99.9 5.9E-22 2E-26 175.8 21.2 185 163-354 29-228 (234)
7 3dlc_A Putative S-adenosyl-L-m 99.9 1E-22 3.5E-27 178.2 15.9 183 164-353 31-215 (219)
8 3bus_A REBM, methyltransferase 99.9 1.2E-21 4.1E-26 177.8 21.8 168 166-342 50-217 (273)
9 1xxl_A YCGJ protein; structura 99.9 8.3E-22 2.8E-26 175.7 20.3 165 167-342 11-175 (239)
10 3hnr_A Probable methyltransfer 99.9 1.9E-22 6.6E-27 177.1 15.1 175 168-352 36-212 (220)
11 3ujc_A Phosphoethanolamine N-m 99.9 7.1E-22 2.4E-26 178.3 18.6 167 161-342 39-207 (266)
12 1nkv_A Hypothetical protein YJ 99.9 1.2E-21 4.1E-26 176.1 18.8 167 161-340 20-186 (256)
13 3kkz_A Uncharacterized protein 99.9 4.2E-21 1.4E-25 173.9 21.2 169 160-342 28-197 (267)
14 3f4k_A Putative methyltransfer 99.9 5.8E-21 2E-25 171.7 21.8 169 160-342 28-197 (257)
15 3vc1_A Geranyl diphosphate 2-C 99.9 4.3E-21 1.5E-25 177.9 21.2 164 166-342 105-270 (312)
16 1p91_A Ribosomal RNA large sub 99.9 8.8E-22 3E-26 178.5 16.1 179 71-289 2-182 (269)
17 3l8d_A Methyltransferase; stru 99.9 2.3E-21 7.7E-26 172.7 18.3 156 165-339 43-198 (242)
18 2p7i_A Hypothetical protein; p 99.9 1.8E-21 6.2E-26 173.7 17.4 150 177-340 42-198 (250)
19 3ccf_A Cyclopropane-fatty-acyl 99.9 2E-21 6.7E-26 177.3 16.8 162 168-343 48-212 (279)
20 3mgg_A Methyltransferase; NYSG 99.9 4.3E-21 1.5E-25 174.5 17.2 170 167-341 27-198 (276)
21 4htf_A S-adenosylmethionine-de 99.9 3.9E-21 1.3E-25 175.8 16.6 171 168-343 60-234 (285)
22 3h2b_A SAM-dependent methyltra 99.9 3.2E-21 1.1E-25 167.3 14.5 141 178-343 42-184 (203)
23 2p35_A Trans-aconitate 2-methy 99.9 1.9E-20 6.6E-25 168.4 19.1 160 166-335 22-184 (259)
24 3jwg_A HEN1, methyltransferase 99.9 8.7E-21 3E-25 166.6 16.2 162 167-338 19-189 (219)
25 3jwh_A HEN1; methyltransferase 99.9 1.5E-20 5.3E-25 164.8 16.7 161 166-337 18-188 (217)
26 3ou2_A SAM-dependent methyltra 99.8 3.6E-20 1.2E-24 162.0 18.3 165 167-342 35-206 (218)
27 3dli_A Methyltransferase; PSI- 99.8 7.2E-21 2.4E-25 169.6 13.9 154 165-343 28-186 (240)
28 3g5l_A Putative S-adenosylmeth 99.8 1.2E-20 4.3E-25 169.3 15.4 169 167-342 34-217 (253)
29 2aot_A HMT, histamine N-methyl 99.8 1.4E-20 4.7E-25 172.9 14.8 154 176-338 51-218 (292)
30 1pjz_A Thiopurine S-methyltran 99.8 1.5E-20 5E-25 163.6 13.9 151 169-341 14-176 (203)
31 3hem_A Cyclopropane-fatty-acyl 99.8 7.5E-20 2.6E-24 168.7 19.5 169 166-343 61-245 (302)
32 3sm3_A SAM-dependent methyltra 99.8 9.8E-20 3.3E-24 161.1 19.5 166 168-340 23-206 (235)
33 1kpg_A CFA synthase;, cyclopro 99.8 1E-19 3.5E-24 166.4 20.1 168 166-342 53-229 (287)
34 2yqz_A Hypothetical protein TT 99.8 4.9E-20 1.7E-24 166.0 17.6 157 174-338 36-193 (263)
35 3gu3_A Methyltransferase; alph 99.8 6.4E-20 2.2E-24 167.8 18.1 170 167-343 11-192 (284)
36 3i9f_A Putative type 11 methyl 99.8 1.1E-20 3.8E-25 159.1 11.8 142 170-344 10-151 (170)
37 3ege_A Putative methyltransfer 99.8 2.5E-20 8.6E-25 168.3 14.8 160 164-343 21-180 (261)
38 1xtp_A LMAJ004091AAA; SGPP, st 99.8 2.6E-20 9E-25 167.0 14.5 155 167-342 83-239 (254)
39 3lcc_A Putative methyl chlorid 99.8 6E-20 2E-24 163.0 16.1 151 166-342 56-208 (235)
40 3bkw_A MLL3908 protein, S-aden 99.8 8.9E-20 3.1E-24 162.3 17.1 168 167-341 33-214 (243)
41 3e23_A Uncharacterized protein 99.8 6.4E-20 2.2E-24 160.1 15.7 148 164-341 32-182 (211)
42 4hg2_A Methyltransferase type 99.8 3.1E-20 1E-24 167.2 13.7 113 163-289 27-139 (257)
43 4fsd_A Arsenic methyltransfera 99.8 7E-20 2.4E-24 174.6 17.0 158 175-340 81-250 (383)
44 3cc8_A Putative methyltransfer 99.8 6.4E-20 2.2E-24 161.6 15.5 159 167-342 23-186 (230)
45 2gs9_A Hypothetical protein TT 99.8 2.3E-19 7.7E-24 156.5 18.8 136 177-332 36-171 (211)
46 3ocj_A Putative exported prote 99.8 6E-20 2.1E-24 169.7 15.7 173 176-352 117-304 (305)
47 3pfg_A N-methyltransferase; N, 99.8 2.3E-20 8E-25 168.5 12.6 166 177-353 50-250 (263)
48 1y8c_A S-adenosylmethionine-de 99.8 1E-19 3.6E-24 162.0 16.0 168 167-341 25-225 (246)
49 1ve3_A Hypothetical protein PH 99.8 1.1E-19 3.8E-24 160.0 15.7 175 167-352 30-226 (227)
50 3mcz_A O-methyltransferase; ad 99.8 4.6E-19 1.6E-23 167.0 20.4 178 168-353 169-350 (352)
51 3bkx_A SAM-dependent methyltra 99.8 3.2E-19 1.1E-23 162.0 18.5 173 167-341 33-219 (275)
52 1x19_A CRTF-related protein; m 99.8 1.2E-18 4.1E-23 164.6 22.5 179 166-352 179-359 (359)
53 2gb4_A Thiopurine S-methyltran 99.8 6.5E-19 2.2E-23 158.1 19.2 153 167-341 58-227 (252)
54 2xvm_A Tellurite resistance pr 99.8 6.6E-19 2.3E-23 151.7 18.4 147 168-339 23-171 (199)
55 2ex4_A Adrenal gland protein A 99.8 1.1E-19 3.7E-24 162.0 13.4 145 177-341 79-225 (241)
56 2fk8_A Methoxy mycolic acid sy 99.8 4.1E-19 1.4E-23 164.9 17.5 167 166-342 79-255 (318)
57 3i53_A O-methyltransferase; CO 99.8 1.4E-18 4.7E-23 162.5 20.3 160 170-343 162-323 (332)
58 3g2m_A PCZA361.24; SAM-depende 99.8 7.4E-19 2.5E-23 161.8 18.2 172 163-342 69-275 (299)
59 1vlm_A SAM-dependent methyltra 99.8 1.1E-18 3.8E-23 153.2 18.2 141 178-341 48-188 (219)
60 2a14_A Indolethylamine N-methy 99.8 1.3E-19 4.5E-24 163.9 12.4 153 174-342 52-239 (263)
61 3gwz_A MMCR; methyltransferase 99.8 3.2E-18 1.1E-22 162.3 22.2 163 166-340 191-355 (369)
62 3g5t_A Trans-aconitate 3-methy 99.8 1.1E-18 3.9E-23 160.5 18.3 172 163-341 23-209 (299)
63 3bxo_A N,N-dimethyltransferase 99.8 1.3E-19 4.5E-24 160.8 11.5 172 167-352 32-239 (239)
64 2r3s_A Uncharacterized protein 99.8 1.5E-18 5.2E-23 162.1 18.8 169 166-342 152-324 (335)
65 2p8j_A S-adenosylmethionine-de 99.8 2.8E-19 9.5E-24 155.5 12.4 155 176-339 22-181 (209)
66 3e8s_A Putative SAM dependent 99.8 2.1E-19 7.1E-24 158.0 11.6 160 168-340 43-208 (227)
67 3dp7_A SAM-dependent methyltra 99.8 1.2E-18 4E-23 164.9 17.1 170 177-352 179-354 (363)
68 3d2l_A SAM-dependent methyltra 99.8 1.7E-18 5.7E-23 154.1 16.5 166 165-340 23-222 (243)
69 2i62_A Nicotinamide N-methyltr 99.8 9.4E-19 3.2E-23 157.7 14.6 164 174-353 53-262 (265)
70 1qzz_A RDMB, aclacinomycin-10- 99.8 6.1E-18 2.1E-22 160.5 20.7 166 167-343 172-341 (374)
71 3thr_A Glycine N-methyltransfe 99.8 3.4E-19 1.2E-23 163.4 11.2 124 163-288 43-178 (293)
72 2kw5_A SLR1183 protein; struct 99.8 1.6E-18 5.4E-23 150.0 14.8 148 167-341 22-171 (202)
73 1tw3_A COMT, carminomycin 4-O- 99.8 1E-17 3.6E-22 158.1 20.8 166 167-343 173-341 (360)
74 1ri5_A MRNA capping enzyme; me 99.8 6.2E-19 2.1E-23 161.7 11.4 158 176-342 63-251 (298)
75 3g07_A 7SK snRNA methylphospha 99.8 2.8E-19 9.4E-24 164.2 8.8 155 177-340 46-268 (292)
76 2ip2_A Probable phenazine-spec 99.8 7.1E-18 2.4E-22 157.6 18.3 166 166-343 157-324 (334)
77 2qe6_A Uncharacterized protein 99.8 7.6E-18 2.6E-22 153.1 17.6 155 168-337 67-238 (274)
78 3ofk_A Nodulation protein S; N 99.8 2.4E-18 8E-23 150.6 13.0 114 167-288 41-157 (216)
79 2g72_A Phenylethanolamine N-me 99.8 1.4E-18 4.8E-23 159.2 11.9 160 167-342 59-257 (289)
80 3lst_A CALO1 methyltransferase 99.8 5.2E-18 1.8E-22 159.6 15.7 169 167-349 174-344 (348)
81 3reo_A (ISO)eugenol O-methyltr 99.8 1.7E-17 5.9E-22 157.2 19.0 165 167-347 192-361 (368)
82 3cgg_A SAM-dependent methyltra 99.8 3.4E-17 1.2E-21 140.2 17.7 127 176-340 45-174 (195)
83 3htx_A HEN1; HEN1, small RNA m 99.8 2.8E-17 9.5E-22 165.1 19.4 168 164-337 708-894 (950)
84 4a6d_A Hydroxyindole O-methylt 99.8 5.4E-17 1.9E-21 152.8 20.4 176 167-353 169-347 (353)
85 2vdw_A Vaccinia virus capping 99.8 3.2E-18 1.1E-22 157.7 11.1 164 177-343 48-248 (302)
86 1fp1_D Isoliquiritigenin 2'-O- 99.8 2.4E-17 8.2E-22 156.4 17.6 156 167-340 198-359 (372)
87 3ggd_A SAM-dependent methyltra 99.7 1.3E-17 4.5E-22 148.7 14.7 151 176-340 55-218 (245)
88 1wzn_A SAM-dependent methyltra 99.7 2.5E-17 8.5E-22 147.5 16.4 114 167-287 31-147 (252)
89 3p9c_A Caffeic acid O-methyltr 99.7 4.4E-17 1.5E-21 154.1 18.9 162 167-344 190-356 (364)
90 3e05_A Precorrin-6Y C5,15-meth 99.7 1.7E-16 5.9E-21 137.5 21.2 137 161-333 24-160 (204)
91 3m70_A Tellurite resistance pr 99.7 2.8E-17 9.7E-22 150.1 16.7 137 176-338 119-257 (286)
92 3mq2_A 16S rRNA methyltransfer 99.7 1.2E-17 4E-22 146.5 11.0 158 172-342 22-185 (218)
93 2avn_A Ubiquinone/menaquinone 99.7 2.5E-17 8.4E-22 148.5 13.1 161 167-343 46-215 (260)
94 1fp2_A Isoflavone O-methyltran 99.7 6.4E-17 2.2E-21 152.4 15.9 149 176-342 187-342 (352)
95 3orh_A Guanidinoacetate N-meth 99.7 1.9E-18 6.6E-23 153.7 4.8 104 176-284 59-169 (236)
96 1fbn_A MJ fibrillarin homologu 99.7 1.6E-16 5.5E-21 140.5 16.2 142 170-343 67-215 (230)
97 2pxx_A Uncharacterized protein 99.7 7.2E-17 2.5E-21 140.5 12.9 117 164-288 31-162 (215)
98 3grz_A L11 mtase, ribosomal pr 99.7 2.3E-16 7.8E-21 136.8 15.7 139 176-353 59-197 (205)
99 3m33_A Uncharacterized protein 99.7 1.3E-16 4.3E-21 140.8 13.9 123 176-345 47-171 (226)
100 3fpf_A Mtnas, putative unchara 99.7 2E-16 6.7E-21 143.5 14.9 108 171-286 116-223 (298)
101 1zx0_A Guanidinoacetate N-meth 99.7 1.8E-17 6E-22 147.3 7.9 107 175-286 58-171 (236)
102 1zg3_A Isoflavanone 4'-O-methy 99.7 1.6E-16 5.3E-21 150.0 14.6 151 177-344 193-350 (358)
103 3bgv_A MRNA CAP guanine-N7 met 99.7 7.6E-17 2.6E-21 149.3 12.1 159 177-342 34-233 (313)
104 3njr_A Precorrin-6Y methylase; 99.7 1.8E-15 6.2E-20 131.4 19.9 139 162-339 40-178 (204)
105 3hm2_A Precorrin-6Y C5,15-meth 99.7 5.6E-16 1.9E-20 130.9 15.7 118 163-287 11-129 (178)
106 4df3_A Fibrillarin-like rRNA/T 99.7 5E-16 1.7E-20 136.7 14.8 144 172-343 72-219 (233)
107 1yzh_A TRNA (guanine-N(7)-)-me 99.7 9.4E-16 3.2E-20 134.0 16.2 107 177-286 41-157 (214)
108 3p2e_A 16S rRNA methylase; met 99.7 1.6E-16 5.5E-21 140.1 11.1 155 176-343 23-187 (225)
109 1dus_A MJ0882; hypothetical pr 99.7 1.8E-15 6.2E-20 129.2 16.7 119 164-288 39-160 (194)
110 3giw_A Protein of unknown func 99.7 7.3E-16 2.5E-20 138.2 14.6 158 168-337 68-243 (277)
111 2zfu_A Nucleomethylin, cerebra 99.7 8.2E-16 2.8E-20 134.3 14.5 126 176-353 66-192 (215)
112 3q87_B N6 adenine specific DNA 99.7 1.3E-15 4.5E-20 128.3 14.9 126 176-348 22-158 (170)
113 3evz_A Methyltransferase; NYSG 99.7 7E-15 2.4E-19 129.7 19.3 131 175-339 53-204 (230)
114 1nt2_A Fibrillarin-like PRE-rR 99.7 4.2E-15 1.4E-19 129.6 17.5 106 173-286 53-162 (210)
115 1xdz_A Methyltransferase GIDB; 99.7 7.3E-16 2.5E-20 137.2 12.9 130 176-340 69-201 (240)
116 2b3t_A Protein methyltransfera 99.7 2.8E-15 9.7E-20 136.2 16.9 152 163-350 96-274 (276)
117 2ld4_A Anamorsin; methyltransf 99.7 6.3E-16 2.1E-20 130.8 11.7 117 173-333 8-128 (176)
118 2nxc_A L11 mtase, ribosomal pr 99.7 1.2E-15 4.2E-20 137.0 14.2 144 166-351 111-254 (254)
119 3p9n_A Possible methyltransfer 99.7 8E-16 2.7E-20 131.7 12.4 110 176-289 43-157 (189)
120 2pwy_A TRNA (adenine-N(1)-)-me 99.7 4.3E-15 1.5E-19 133.3 17.7 142 163-341 82-224 (258)
121 3fzg_A 16S rRNA methylase; met 99.6 5.8E-16 2E-20 130.5 10.8 162 162-351 36-197 (200)
122 3lbf_A Protein-L-isoaspartate 99.6 1.8E-15 6.3E-20 131.5 14.3 114 163-287 63-176 (210)
123 3iv6_A Putative Zn-dependent a 99.6 1.4E-15 4.6E-20 136.5 12.9 111 165-287 33-150 (261)
124 1yb2_A Hypothetical protein TA 99.6 1.5E-15 5.2E-20 138.0 13.0 136 167-340 100-236 (275)
125 3mb5_A SAM-dependent methyltra 99.6 3.4E-15 1.2E-19 133.9 14.5 117 163-287 79-196 (255)
126 2yxd_A Probable cobalt-precorr 99.6 1.9E-14 6.3E-19 121.8 18.2 134 161-336 19-152 (183)
127 3mti_A RRNA methylase; SAM-dep 99.6 1.6E-15 5.5E-20 129.2 11.5 107 176-287 21-137 (185)
128 1l3i_A Precorrin-6Y methyltran 99.6 6.2E-15 2.1E-19 125.6 14.6 119 161-287 17-136 (192)
129 3dmg_A Probable ribosomal RNA 99.6 1.6E-15 5.3E-20 143.9 11.4 116 166-287 220-342 (381)
130 2fca_A TRNA (guanine-N(7)-)-me 99.6 3E-15 1E-19 130.8 12.3 107 177-286 38-154 (213)
131 3dxy_A TRNA (guanine-N(7)-)-me 99.6 1.3E-15 4.3E-20 133.7 9.8 108 177-287 34-152 (218)
132 2frn_A Hypothetical protein PH 99.6 1.6E-14 5.6E-19 131.4 17.4 138 166-337 116-253 (278)
133 2ipx_A RRNA 2'-O-methyltransfe 99.6 7.4E-15 2.5E-19 130.0 14.7 142 172-342 72-218 (233)
134 3g89_A Ribosomal RNA small sub 99.6 4.1E-15 1.4E-19 133.1 12.9 131 176-341 79-212 (249)
135 4dzr_A Protein-(glutamine-N5) 99.6 3.7E-16 1.3E-20 135.9 5.8 140 166-340 18-191 (215)
136 3lpm_A Putative methyltransfer 99.6 8.2E-15 2.8E-19 131.9 14.8 140 167-340 38-200 (259)
137 2b25_A Hypothetical protein; s 99.6 1.4E-15 4.7E-20 142.3 9.3 121 163-288 91-222 (336)
138 3uwp_A Histone-lysine N-methyl 99.6 2.6E-15 8.9E-20 141.1 11.1 123 164-288 160-291 (438)
139 1o54_A SAM-dependent O-methylt 99.6 1.6E-14 5.5E-19 131.3 15.6 117 163-287 98-215 (277)
140 1vbf_A 231AA long hypothetical 99.6 1.1E-14 3.7E-19 128.6 13.9 112 164-288 57-168 (231)
141 3ckk_A TRNA (guanine-N(7)-)-me 99.6 5E-15 1.7E-19 131.4 11.4 112 176-287 45-170 (235)
142 2fyt_A Protein arginine N-meth 99.6 1E-14 3.5E-19 136.5 14.0 112 167-282 54-168 (340)
143 3id6_C Fibrillarin-like rRNA/T 99.6 1.1E-13 3.9E-18 121.8 19.9 146 167-341 63-216 (232)
144 2ift_A Putative methylase HI07 99.6 2.7E-15 9.4E-20 129.9 8.6 119 167-288 42-166 (201)
145 2h00_A Methyltransferase 10 do 99.6 9E-15 3.1E-19 131.1 12.2 152 177-340 65-237 (254)
146 1dl5_A Protein-L-isoaspartate 99.6 1.5E-14 5.2E-19 134.1 13.6 115 164-287 62-177 (317)
147 3eey_A Putative rRNA methylase 99.6 5.4E-15 1.8E-19 127.2 9.8 112 175-288 20-142 (197)
148 2yxe_A Protein-L-isoaspartate 99.6 1.9E-14 6.7E-19 125.5 13.5 115 165-288 65-180 (215)
149 3bwc_A Spermidine synthase; SA 99.6 1.1E-14 3.9E-19 134.1 12.2 139 176-340 94-239 (304)
150 3q7e_A Protein arginine N-meth 99.6 1.4E-14 4.7E-19 136.2 12.8 105 176-284 65-172 (349)
151 1g8a_A Fibrillarin-like PRE-rR 99.6 9.5E-14 3.2E-18 122.2 17.2 140 173-342 69-213 (227)
152 1ws6_A Methyltransferase; stru 99.6 3.5E-15 1.2E-19 125.1 7.2 120 163-290 25-152 (171)
153 2pjd_A Ribosomal RNA small sub 99.6 8.5E-15 2.9E-19 137.3 10.5 120 163-288 182-306 (343)
154 2esr_A Methyltransferase; stru 99.6 5.8E-15 2E-19 124.8 8.5 120 166-289 19-142 (177)
155 2fhp_A Methylase, putative; al 99.6 1.8E-14 6.3E-19 122.5 11.6 126 160-289 26-158 (187)
156 1jsx_A Glucose-inhibited divis 99.6 2.4E-14 8.1E-19 124.1 12.3 101 177-285 65-165 (207)
157 4dcm_A Ribosomal RNA large sub 99.6 3.8E-14 1.3E-18 134.2 14.6 124 163-287 208-336 (375)
158 2fpo_A Methylase YHHF; structu 99.6 1.3E-14 4.4E-19 125.7 10.3 121 163-288 39-163 (202)
159 3gdh_A Trimethylguanosine synt 99.6 1.5E-15 5.2E-20 135.0 4.4 141 177-340 78-218 (241)
160 1ixk_A Methyltransferase; open 99.6 4.4E-14 1.5E-18 130.8 14.2 118 167-287 108-248 (315)
161 3r0q_C Probable protein argini 99.5 2.9E-14 1E-18 135.2 12.9 115 167-286 53-170 (376)
162 1i9g_A Hypothetical protein RV 99.5 4.7E-14 1.6E-18 128.2 13.6 121 163-288 85-206 (280)
163 3u81_A Catechol O-methyltransf 99.5 9.3E-15 3.2E-19 128.3 8.1 116 169-287 50-172 (221)
164 3bzb_A Uncharacterized protein 99.5 8.9E-14 3.1E-18 126.7 14.8 121 164-285 66-205 (281)
165 2vdv_E TRNA (guanine-N(7)-)-me 99.5 4.7E-14 1.6E-18 125.9 12.6 105 177-286 49-174 (246)
166 1g6q_1 HnRNP arginine N-methyl 99.5 5E-14 1.7E-18 131.2 13.1 105 175-283 36-143 (328)
167 1jg1_A PIMT;, protein-L-isoasp 99.5 4.6E-14 1.6E-18 125.0 12.2 114 164-288 78-192 (235)
168 2ozv_A Hypothetical protein AT 99.5 5.7E-14 2E-18 126.5 12.8 117 168-286 27-171 (260)
169 3opn_A Putative hemolysin; str 99.5 2.7E-15 9.3E-20 132.8 3.9 156 167-341 26-184 (232)
170 2y1w_A Histone-arginine methyl 99.5 5.7E-14 2E-18 131.9 13.1 116 167-287 40-157 (348)
171 1u2z_A Histone-lysine N-methyl 99.5 4.3E-14 1.5E-18 135.2 12.4 124 163-288 228-362 (433)
172 3lec_A NADB-rossmann superfami 99.5 1.6E-13 5.3E-18 120.3 14.7 136 166-339 12-147 (230)
173 3ntv_A MW1564 protein; rossman 99.5 3.8E-14 1.3E-18 125.5 10.9 117 166-287 60-178 (232)
174 3hp7_A Hemolysin, putative; st 99.5 4.2E-14 1.4E-18 128.4 11.1 152 168-341 75-232 (291)
175 1i1n_A Protein-L-isoaspartate 99.5 1.3E-13 4.3E-18 121.3 13.7 114 168-288 66-185 (226)
176 1ej0_A FTSJ; methyltransferase 99.5 5.8E-14 2E-18 117.8 10.6 100 175-288 20-139 (180)
177 1af7_A Chemotaxis receptor met 99.5 4.1E-14 1.4E-18 127.9 10.2 108 177-284 105-251 (274)
178 3tma_A Methyltransferase; thum 99.5 1.9E-13 6.4E-18 128.7 14.8 125 160-287 186-319 (354)
179 2pbf_A Protein-L-isoaspartate 99.5 1.4E-13 4.7E-18 121.1 12.9 113 168-287 69-195 (227)
180 3kr9_A SAM-dependent methyltra 99.5 4E-13 1.4E-17 117.5 15.2 134 167-339 7-141 (225)
181 2gpy_A O-methyltransferase; st 99.5 1.3E-13 4.5E-18 121.9 12.3 119 164-287 41-162 (233)
182 2yvl_A TRMI protein, hypotheti 99.5 3.2E-13 1.1E-17 120.2 14.8 115 164-287 78-192 (248)
183 3gnl_A Uncharacterized protein 99.5 2.7E-13 9.1E-18 119.8 14.0 136 166-339 12-147 (244)
184 3dr5_A Putative O-methyltransf 99.5 1.1E-13 3.9E-18 121.5 11.6 116 166-286 45-164 (221)
185 3tfw_A Putative O-methyltransf 99.5 3.6E-13 1.2E-17 120.3 15.0 110 174-288 60-173 (248)
186 3a27_A TYW2, uncharacterized p 99.5 1.1E-12 3.9E-17 118.8 17.1 106 175-288 117-222 (272)
187 2igt_A SAM dependent methyltra 99.5 2.9E-13 1E-17 126.0 12.9 119 166-287 141-274 (332)
188 1r18_A Protein-L-isoaspartate( 99.5 3.2E-13 1.1E-17 118.9 12.2 114 167-287 72-196 (227)
189 2bm8_A Cephalosporin hydroxyla 99.5 6.6E-14 2.3E-18 124.2 7.8 99 177-286 81-188 (236)
190 1o9g_A RRNA methyltransferase; 99.5 2.3E-13 7.9E-18 121.7 11.1 120 166-285 40-214 (250)
191 4azs_A Methyltransferase WBDD; 99.5 6.7E-14 2.3E-18 139.7 8.2 106 178-288 67-176 (569)
192 3duw_A OMT, O-methyltransferas 99.5 1.4E-12 4.7E-17 114.4 15.6 110 174-288 55-170 (223)
193 3c3p_A Methyltransferase; NP_9 99.4 1.8E-13 6.2E-18 119.0 9.2 105 177-287 56-162 (210)
194 2yxl_A PH0851 protein, 450AA l 99.4 1.3E-12 4.5E-17 126.7 16.2 119 167-288 249-392 (450)
195 2plw_A Ribosomal RNA methyltra 99.4 5.2E-13 1.8E-17 115.0 11.9 99 175-287 20-156 (201)
196 3tr6_A O-methyltransferase; ce 99.4 4.5E-13 1.5E-17 117.6 11.5 108 176-288 63-177 (225)
197 3tm4_A TRNA (guanine N2-)-meth 99.4 3.2E-12 1.1E-16 121.0 18.1 153 162-352 203-366 (373)
198 3r3h_A O-methyltransferase, SA 99.4 1.7E-13 5.7E-18 122.1 8.6 110 175-289 58-174 (242)
199 3b3j_A Histone-arginine methyl 99.4 4.7E-13 1.6E-17 130.6 12.4 114 167-285 148-263 (480)
200 4hc4_A Protein arginine N-meth 99.4 6.7E-13 2.3E-17 124.9 12.1 102 177-283 83-187 (376)
201 1nv8_A HEMK protein; class I a 99.4 7.1E-13 2.4E-17 120.8 11.9 117 163-285 109-249 (284)
202 1sqg_A SUN protein, FMU protei 99.4 1.7E-12 5.7E-17 125.3 15.0 121 164-288 233-377 (429)
203 3ajd_A Putative methyltransfer 99.4 2.2E-13 7.6E-18 123.6 8.4 117 169-288 75-214 (274)
204 3sso_A Methyltransferase; macr 99.4 2.6E-13 8.7E-18 127.3 8.3 111 163-287 203-326 (419)
205 1zq9_A Probable dimethyladenos 99.4 2.3E-13 7.8E-18 124.2 7.7 114 163-282 14-144 (285)
206 2qm3_A Predicted methyltransfe 99.4 9.1E-12 3.1E-16 117.9 18.7 105 176-285 171-278 (373)
207 1sui_A Caffeoyl-COA O-methyltr 99.4 5.9E-13 2E-17 118.9 9.8 107 176-287 78-192 (247)
208 3adn_A Spermidine synthase; am 99.4 3.3E-12 1.1E-16 116.8 14.6 111 177-287 83-200 (294)
209 1wy7_A Hypothetical protein PH 99.4 1.2E-11 4E-16 107.0 17.1 114 159-282 28-146 (207)
210 2hnk_A SAM-dependent O-methylt 99.4 2.7E-12 9.2E-17 113.9 12.9 117 166-287 49-183 (239)
211 3lcv_B Sisomicin-gentamicin re 99.4 3E-12 1E-16 112.8 12.4 157 166-351 123-281 (281)
212 2f8l_A Hypothetical protein LM 99.4 4.3E-12 1.5E-16 118.9 14.1 127 157-288 106-259 (344)
213 3gjy_A Spermidine synthase; AP 99.4 2.2E-12 7.4E-17 118.4 11.5 106 179-287 91-202 (317)
214 1iy9_A Spermidine synthase; ro 99.4 3.4E-12 1.2E-16 115.7 12.4 109 177-285 75-189 (275)
215 1inl_A Spermidine synthase; be 99.4 2.9E-12 9.8E-17 117.5 11.8 109 177-285 90-205 (296)
216 3cbg_A O-methyltransferase; cy 99.4 1.3E-12 4.3E-17 115.6 8.8 108 176-288 71-185 (232)
217 2avd_A Catechol-O-methyltransf 99.4 1.3E-12 4.5E-17 114.9 8.6 109 174-287 66-181 (229)
218 3k6r_A Putative transferase PH 99.4 1.6E-11 5.5E-16 110.9 15.8 135 167-335 117-251 (278)
219 2nyu_A Putative ribosomal RNA 99.4 6.1E-12 2.1E-16 107.7 12.3 100 175-288 20-148 (196)
220 1ne2_A Hypothetical protein TA 99.3 6.8E-12 2.3E-16 108.0 12.3 90 174-275 48-139 (200)
221 1xj5_A Spermidine synthase 1; 99.3 3E-12 1E-16 119.1 10.4 110 176-285 119-235 (334)
222 1uir_A Polyamine aminopropyltr 99.3 2.2E-12 7.5E-17 119.3 9.3 110 177-286 77-196 (314)
223 2wa2_A Non-structural protein 99.3 5.6E-13 1.9E-17 120.8 5.2 112 168-287 73-195 (276)
224 2frx_A Hypothetical protein YE 99.3 1E-11 3.6E-16 120.9 14.4 117 169-288 107-249 (479)
225 2oxt_A Nucleoside-2'-O-methylt 99.3 7.6E-13 2.6E-17 119.2 5.9 113 167-287 64-187 (265)
226 2pt6_A Spermidine synthase; tr 99.3 6.2E-12 2.1E-16 116.5 12.1 109 177-286 116-231 (321)
227 2o07_A Spermidine synthase; st 99.3 2.2E-12 7.4E-17 118.7 8.7 112 176-287 94-211 (304)
228 3m6w_A RRNA methylase; rRNA me 99.3 2.6E-12 8.8E-17 124.1 9.4 117 168-288 92-232 (464)
229 3frh_A 16S rRNA methylase; met 99.3 1.5E-11 5.1E-16 107.4 13.1 148 176-352 104-252 (253)
230 3c3y_A Pfomt, O-methyltransfer 99.3 3.6E-12 1.2E-16 113.1 9.1 106 176-286 69-182 (237)
231 3dou_A Ribosomal RNA large sub 99.3 1.4E-11 4.7E-16 105.6 12.2 98 175-288 23-142 (191)
232 2cmg_A Spermidine synthase; tr 99.3 5.2E-12 1.8E-16 113.6 8.9 100 177-286 72-172 (262)
233 3m4x_A NOL1/NOP2/SUN family pr 99.3 4.6E-12 1.6E-16 122.2 9.1 117 168-287 96-236 (456)
234 1qam_A ERMC' methyltransferase 99.3 1.8E-12 6.1E-17 115.6 5.7 112 163-282 16-143 (244)
235 2i7c_A Spermidine synthase; tr 99.3 5.3E-12 1.8E-16 115.0 8.8 111 176-286 77-193 (283)
236 2b2c_A Spermidine synthase; be 99.3 3.4E-12 1.2E-16 117.7 7.4 108 177-285 108-222 (314)
237 1mjf_A Spermidine synthase; sp 99.3 9.1E-12 3.1E-16 113.3 8.4 107 177-287 75-195 (281)
238 3c0k_A UPF0064 protein YCCW; P 99.3 1.9E-11 6.5E-16 116.7 10.9 109 176-287 219-341 (396)
239 2b78_A Hypothetical protein SM 99.2 1.8E-11 6.3E-16 116.2 10.3 109 176-287 211-333 (385)
240 4dmg_A Putative uncharacterize 99.2 3E-11 1E-15 114.7 11.1 105 177-287 214-328 (393)
241 1yub_A Ermam, rRNA methyltrans 99.2 7.4E-14 2.5E-18 124.6 -7.1 113 165-285 17-145 (245)
242 3v97_A Ribosomal RNA large sub 99.2 2.8E-11 9.6E-16 123.2 10.7 109 177-287 539-659 (703)
243 2ih2_A Modification methylase 99.2 6.2E-11 2.1E-15 113.9 12.4 119 156-287 18-166 (421)
244 2okc_A Type I restriction enzy 99.2 3.5E-11 1.2E-15 116.6 10.5 129 157-287 151-309 (445)
245 1wxx_A TT1595, hypothetical pr 99.2 1.3E-11 4.6E-16 117.1 7.1 106 177-287 209-327 (382)
246 2as0_A Hypothetical protein PH 99.2 2.1E-11 7.2E-16 116.4 8.4 109 177-288 217-338 (396)
247 2p41_A Type II methyltransfera 99.2 6.1E-12 2.1E-16 115.6 4.1 104 175-288 80-194 (305)
248 1uwv_A 23S rRNA (uracil-5-)-me 99.2 4E-10 1.4E-14 108.7 16.9 112 164-284 273-388 (433)
249 2xyq_A Putative 2'-O-methyl tr 99.2 6.5E-11 2.2E-15 107.6 10.5 118 173-339 59-195 (290)
250 3gru_A Dimethyladenosine trans 99.2 1.7E-10 5.7E-15 105.2 11.8 88 163-257 36-123 (295)
251 2h1r_A Dimethyladenosine trans 99.2 1.2E-10 4E-15 106.9 10.6 109 163-279 28-153 (299)
252 2yx1_A Hypothetical protein MJ 99.1 2.4E-10 8.1E-15 106.6 11.5 106 168-287 188-293 (336)
253 3k0b_A Predicted N6-adenine-sp 99.1 2.4E-10 8.4E-15 108.5 11.5 136 148-288 174-353 (393)
254 2jjq_A Uncharacterized RNA met 99.1 9.3E-10 3.2E-14 105.6 14.7 99 176-285 289-387 (425)
255 3ldg_A Putative uncharacterize 99.1 5.2E-10 1.8E-14 105.8 12.2 123 162-287 179-345 (384)
256 3ldu_A Putative methylase; str 99.1 6.6E-10 2.3E-14 105.4 11.9 124 161-287 179-346 (385)
257 3tqs_A Ribosomal RNA small sub 99.0 7.4E-10 2.5E-14 99.0 10.4 85 163-255 15-103 (255)
258 2b9e_A NOL1/NOP2/SUN domain fa 99.0 2.9E-09 9.8E-14 97.9 13.9 117 168-288 93-237 (309)
259 3b5i_A S-adenosyl-L-methionine 99.0 1.3E-08 4.3E-13 95.6 17.6 164 178-341 53-298 (374)
260 3fut_A Dimethyladenosine trans 99.0 1.1E-09 3.8E-14 98.6 9.4 86 163-257 33-119 (271)
261 2ar0_A M.ecoki, type I restric 99.0 9.6E-10 3.3E-14 108.7 9.5 130 156-288 148-315 (541)
262 2efj_A 3,7-dimethylxanthine me 99.0 4.7E-09 1.6E-13 98.6 12.4 159 178-341 53-292 (384)
263 2qfm_A Spermine synthase; sper 98.9 1.4E-09 4.7E-14 101.0 8.3 110 177-287 188-316 (364)
264 1m6y_A S-adenosyl-methyltransf 98.9 1.5E-09 5.3E-14 99.2 8.2 87 166-256 15-106 (301)
265 3bt7_A TRNA (uracil-5-)-methyl 98.9 2.7E-09 9.3E-14 100.7 9.5 111 164-286 201-327 (369)
266 3lkd_A Type I restriction-modi 98.9 2.8E-08 9.7E-13 97.9 14.8 131 156-287 196-360 (542)
267 3v97_A Ribosomal RNA large sub 98.8 1.4E-08 4.9E-13 103.3 11.9 127 160-288 173-350 (703)
268 3axs_A Probable N(2),N(2)-dime 98.8 7.3E-09 2.5E-13 97.9 9.0 104 176-285 51-158 (392)
269 3uzu_A Ribosomal RNA small sub 98.8 9.9E-09 3.4E-13 92.9 9.2 77 163-246 28-106 (279)
270 2dul_A N(2),N(2)-dimethylguano 98.8 6.9E-09 2.4E-13 98.0 8.2 105 177-285 47-164 (378)
271 3khk_A Type I restriction-modi 98.8 1E-08 3.5E-13 101.2 9.2 129 156-287 224-397 (544)
272 1m6e_X S-adenosyl-L-methionnin 98.8 1.2E-08 4E-13 95.1 8.8 159 178-338 52-277 (359)
273 3ftd_A Dimethyladenosine trans 98.8 4E-08 1.4E-12 87.4 11.5 76 163-246 17-92 (249)
274 2r6z_A UPF0341 protein in RSP 98.8 6.6E-09 2.2E-13 93.0 5.8 87 170-260 76-173 (258)
275 1qyr_A KSGA, high level kasuga 98.7 8.5E-09 2.9E-13 91.9 5.3 87 164-257 8-99 (252)
276 4gqb_A Protein arginine N-meth 98.7 5.7E-08 2E-12 96.7 11.0 100 178-282 358-464 (637)
277 2qy6_A UPF0209 protein YFCK; s 98.7 3.5E-08 1.2E-12 88.1 8.5 133 176-342 59-236 (257)
278 3evf_A RNA-directed RNA polyme 98.7 4.1E-08 1.4E-12 87.1 7.7 115 167-287 64-186 (277)
279 3o4f_A Spermidine synthase; am 98.6 3.4E-07 1.2E-11 82.7 13.0 110 177-287 83-200 (294)
280 3cvo_A Methyltransferase-like 98.6 6.4E-07 2.2E-11 76.6 13.7 98 177-284 30-153 (202)
281 2oyr_A UPF0341 protein YHIQ; a 98.6 4.3E-08 1.5E-12 87.5 5.9 109 168-279 77-194 (258)
282 3s1s_A Restriction endonucleas 98.6 6E-07 2E-11 90.7 13.5 133 155-287 293-467 (878)
283 3ua3_A Protein arginine N-meth 98.5 2.2E-07 7.7E-12 92.4 10.0 101 178-282 410-531 (745)
284 3ll7_A Putative methyltransfer 98.5 1.9E-07 6.5E-12 88.5 7.9 76 177-255 93-170 (410)
285 2jny_A Uncharacterized BCR; st 98.4 1.2E-07 4E-12 65.4 3.2 48 66-122 5-52 (67)
286 2jr6_A UPF0434 protein NMA0874 98.4 1.2E-07 4E-12 65.7 3.0 46 67-121 4-49 (68)
287 3gcz_A Polyprotein; flavivirus 98.4 1.5E-07 5.1E-12 83.6 4.2 114 168-287 81-203 (282)
288 4auk_A Ribosomal RNA large sub 98.4 3.9E-06 1.3E-10 77.9 13.5 88 175-278 209-296 (375)
289 2js4_A UPF0434 protein BB2007; 98.4 1.3E-07 4.4E-12 65.9 2.6 46 67-121 4-49 (70)
290 2hf1_A Tetraacyldisaccharide-1 98.4 1.1E-07 3.8E-12 65.8 1.9 46 67-121 4-49 (68)
291 4fzv_A Putative methyltransfer 98.3 1.2E-06 3.9E-11 81.8 9.0 122 168-289 139-288 (359)
292 2pk7_A Uncharacterized protein 98.3 1.4E-07 4.9E-12 65.5 2.1 46 67-121 4-49 (69)
293 3ufb_A Type I restriction-modi 98.3 1.2E-05 4E-10 79.2 15.4 129 156-287 196-364 (530)
294 2kpi_A Uncharacterized protein 98.2 6.2E-07 2.1E-11 59.6 2.9 45 66-121 5-51 (56)
295 1wg8_A Predicted S-adenosylmet 98.2 4.4E-06 1.5E-10 74.6 8.5 81 166-255 11-96 (285)
296 2wk1_A NOVP; transferase, O-me 98.1 1.1E-05 3.7E-10 72.7 8.7 107 176-285 105-244 (282)
297 2k5r_A Uncharacterized protein 98.1 1.7E-06 6E-11 63.8 2.8 54 67-120 4-75 (97)
298 3eld_A Methyltransferase; flav 98.0 6.7E-06 2.3E-10 73.5 6.8 106 176-287 80-193 (300)
299 3c6k_A Spermine synthase; sper 98.0 1.1E-05 3.9E-10 75.1 7.5 108 177-285 205-331 (381)
300 2zig_A TTHA0409, putative modi 97.9 2.8E-05 9.5E-10 70.8 9.0 60 162-224 221-280 (297)
301 3lkz_A Non-structural protein 97.9 7.1E-05 2.4E-09 66.6 11.1 113 167-288 84-207 (321)
302 2k4m_A TR8_protein, UPF0146 pr 97.9 3.4E-05 1.2E-09 61.6 7.8 96 167-289 27-125 (153)
303 3p8z_A Mtase, non-structural p 97.9 0.00015 5.1E-09 62.5 11.7 115 167-289 68-190 (267)
304 1rjd_A PPM1P, carboxy methyl t 97.9 0.00017 5.8E-09 66.7 13.2 161 170-334 90-281 (334)
305 2px2_A Genome polyprotein [con 97.8 4E-05 1.4E-09 67.0 7.8 104 174-287 70-185 (269)
306 2vz8_A Fatty acid synthase; tr 97.8 2.8E-06 9.7E-11 97.3 -0.6 149 176-339 1239-1393(2512)
307 3tka_A Ribosomal RNA small sub 97.5 0.00011 3.9E-09 67.0 6.1 83 166-255 46-135 (347)
308 3vyw_A MNMC2; tRNA wobble urid 97.4 0.0012 4.1E-08 59.7 11.9 140 178-352 97-260 (308)
309 1i4w_A Mitochondrial replicati 97.3 0.00053 1.8E-08 63.6 8.2 74 163-242 38-117 (353)
310 3r24_A NSP16, 2'-O-methyl tran 97.2 0.002 7E-08 57.2 9.7 96 175-288 107-220 (344)
311 1g60_A Adenine-specific methyl 97.2 0.0012 4.1E-08 58.7 8.4 61 161-224 197-257 (260)
312 2uyo_A Hypothetical protein ML 97.1 0.0084 2.9E-07 54.6 14.2 157 179-341 104-278 (310)
313 3iei_A Leucine carboxyl methyl 96.6 0.17 5.7E-06 46.4 18.2 159 177-342 90-282 (334)
314 1pft_A TFIIB, PFTFIIBN; N-term 96.1 0.003 1E-07 40.7 2.5 32 70-110 4-36 (50)
315 1kol_A Formaldehyde dehydrogen 95.9 0.062 2.1E-06 50.5 11.6 104 172-285 180-300 (398)
316 1g55_A DNA cytosine methyltran 95.7 0.041 1.4E-06 50.8 9.4 71 179-257 3-77 (343)
317 1f8f_A Benzyl alcohol dehydrog 95.7 0.048 1.6E-06 50.7 9.8 100 171-285 184-289 (371)
318 2dph_A Formaldehyde dismutase; 95.6 0.06 2.1E-06 50.6 10.4 104 171-285 179-299 (398)
319 2oo3_A Protein involved in cat 95.5 0.01 3.5E-07 52.9 4.2 105 178-289 92-202 (283)
320 3qv2_A 5-cytosine DNA methyltr 95.4 0.14 4.9E-06 46.7 11.8 90 178-276 10-117 (327)
321 2py6_A Methyltransferase FKBM; 95.3 0.053 1.8E-06 51.3 8.7 66 175-240 224-292 (409)
322 3two_A Mannitol dehydrogenase; 95.2 0.085 2.9E-06 48.5 9.5 94 172-285 171-265 (348)
323 1pqw_A Polyketide synthase; ro 95.1 0.11 3.8E-06 43.4 9.5 95 171-285 32-137 (198)
324 1dl6_A Transcription factor II 95.1 0.014 4.8E-07 38.8 2.8 37 65-110 5-42 (58)
325 3q87_A Putative uncharacterize 94.9 0.0067 2.3E-07 46.9 1.0 28 94-121 95-122 (125)
326 3tos_A CALS11; methyltransfera 94.5 0.18 6.2E-06 44.3 9.2 107 178-287 70-219 (257)
327 3s2e_A Zinc-containing alcohol 94.5 0.18 6.2E-06 46.1 9.8 99 171-285 160-263 (340)
328 3goh_A Alcohol dehydrogenase, 94.4 0.11 3.8E-06 47.0 8.2 92 171-284 136-228 (315)
329 2zig_A TTHA0409, putative modi 94.4 0.085 2.9E-06 47.5 7.3 57 230-286 20-98 (297)
330 1boo_A Protein (N-4 cytosine-s 94.4 0.07 2.4E-06 48.7 6.8 61 161-224 237-297 (323)
331 1v3u_A Leukotriene B4 12- hydr 94.4 0.21 7.2E-06 45.4 10.0 96 171-285 139-244 (333)
332 3ps9_A TRNA 5-methylaminomethy 94.3 0.11 3.6E-06 52.6 8.5 130 178-342 67-242 (676)
333 3fpc_A NADP-dependent alcohol 94.3 0.15 5.3E-06 46.8 8.9 100 171-285 160-266 (352)
334 3pvc_A TRNA 5-methylaminomethy 94.3 0.13 4.4E-06 52.1 9.0 131 177-342 58-234 (689)
335 3ip1_A Alcohol dehydrogenase, 94.3 0.26 8.7E-06 46.4 10.5 98 174-285 210-318 (404)
336 4h0n_A DNMT2; SAH binding, tra 94.3 0.21 7.2E-06 45.7 9.6 71 179-257 4-78 (333)
337 1uuf_A YAHK, zinc-type alcohol 94.3 0.13 4.4E-06 47.8 8.3 94 173-285 190-288 (369)
338 3g7u_A Cytosine-specific methy 94.2 0.099 3.4E-06 48.8 7.4 71 179-258 3-81 (376)
339 4eez_A Alcohol dehydrogenase 1 94.2 0.38 1.3E-05 44.0 11.4 100 171-285 157-263 (348)
340 2zwa_A Leucine carboxyl methyl 94.2 1 3.5E-05 45.5 15.4 160 177-341 107-309 (695)
341 3uko_A Alcohol dehydrogenase c 94.1 0.23 7.7E-06 46.2 9.8 103 169-286 185-296 (378)
342 3uog_A Alcohol dehydrogenase; 94.1 0.37 1.3E-05 44.5 11.2 99 171-286 183-288 (363)
343 1pl8_A Human sorbitol dehydrog 94.1 0.27 9.1E-06 45.3 10.1 100 171-285 165-273 (356)
344 1eg2_A Modification methylase 94.0 0.12 4.2E-06 47.0 7.4 61 161-224 227-290 (319)
345 4dvj_A Putative zinc-dependent 93.8 0.36 1.2E-05 44.6 10.5 91 177-284 171-269 (363)
346 3j20_Y 30S ribosomal protein S 93.8 0.031 1E-06 35.9 2.1 30 71-109 19-48 (50)
347 1e3j_A NADP(H)-dependent ketos 93.8 0.59 2E-05 42.8 11.8 99 171-285 162-271 (352)
348 4ej6_A Putative zinc-binding d 93.7 0.44 1.5E-05 44.1 10.9 101 171-286 176-285 (370)
349 1zkd_A DUF185; NESG, RPR58, st 93.7 0.29 1E-05 45.6 9.5 76 178-262 81-163 (387)
350 1p0f_A NADP-dependent alcohol 93.7 0.38 1.3E-05 44.5 10.4 102 169-285 183-293 (373)
351 4b7c_A Probable oxidoreductase 93.7 0.27 9.3E-06 44.8 9.2 100 168-285 140-248 (336)
352 1cdo_A Alcohol dehydrogenase; 93.6 0.53 1.8E-05 43.6 11.1 101 170-285 185-294 (374)
353 2c7p_A Modification methylase 93.5 0.84 2.9E-05 41.6 12.2 68 178-256 11-79 (327)
354 2jhf_A Alcohol dehydrogenase E 93.5 0.53 1.8E-05 43.6 11.1 101 170-285 184-293 (374)
355 1e3i_A Alcohol dehydrogenase, 93.5 0.53 1.8E-05 43.6 11.0 102 169-285 187-297 (376)
356 3m6i_A L-arabinitol 4-dehydrog 93.3 0.88 3E-05 41.8 12.2 101 171-286 173-284 (363)
357 3jv7_A ADH-A; dehydrogenase, n 93.3 0.46 1.6E-05 43.5 10.1 97 174-286 168-271 (345)
358 1jvb_A NAD(H)-dependent alcoho 93.2 0.26 9E-06 45.1 8.4 96 173-285 166-271 (347)
359 2fzw_A Alcohol dehydrogenase c 93.1 0.52 1.8E-05 43.6 10.3 101 170-285 183-292 (373)
360 2j3h_A NADP-dependent oxidored 93.1 0.36 1.2E-05 44.1 9.2 97 171-285 149-255 (345)
361 3gms_A Putative NADPH:quinone 92.9 0.39 1.3E-05 43.8 9.1 102 168-286 135-244 (340)
362 3qwb_A Probable quinone oxidor 92.9 0.49 1.7E-05 43.0 9.7 98 171-285 142-247 (334)
363 4a2c_A Galactitol-1-phosphate 92.8 1.1 3.9E-05 40.6 12.1 103 169-286 152-261 (346)
364 4eye_A Probable oxidoreductase 92.7 0.34 1.2E-05 44.3 8.4 97 171-285 153-257 (342)
365 1yb5_A Quinone oxidoreductase; 92.7 0.77 2.6E-05 42.1 10.8 96 171-285 164-269 (351)
366 2hcy_A Alcohol dehydrogenase 1 92.6 0.32 1.1E-05 44.5 8.1 95 173-285 165-269 (347)
367 1boo_A Protein (N-4 cytosine-s 92.6 0.3 1E-05 44.4 7.8 57 230-286 13-85 (323)
368 1vq8_Z 50S ribosomal protein L 92.6 0.047 1.6E-06 39.0 1.7 32 70-110 26-57 (83)
369 3jyn_A Quinone oxidoreductase; 92.5 0.53 1.8E-05 42.6 9.3 100 170-286 133-240 (325)
370 1piw_A Hypothetical zinc-type 92.4 0.24 8.2E-06 45.7 6.9 98 173-285 175-276 (360)
371 2k5c_A Uncharacterized protein 92.4 0.032 1.1E-06 38.9 0.6 14 70-83 7-20 (95)
372 1rjw_A ADH-HT, alcohol dehydro 92.3 0.89 3E-05 41.4 10.7 94 174-285 161-261 (339)
373 2eih_A Alcohol dehydrogenase; 92.2 0.84 2.9E-05 41.6 10.3 94 173-285 162-265 (343)
374 2c0c_A Zinc binding alcohol de 92.2 0.87 3E-05 41.9 10.5 101 169-286 155-262 (362)
375 2b5w_A Glucose dehydrogenase; 91.9 0.72 2.5E-05 42.4 9.5 89 179-286 174-274 (357)
376 1vj0_A Alcohol dehydrogenase, 91.8 0.49 1.7E-05 44.0 8.3 100 171-285 188-298 (380)
377 2d8a_A PH0655, probable L-thre 91.7 0.75 2.6E-05 42.1 9.3 96 171-285 162-267 (348)
378 2jne_A Hypothetical protein YF 91.5 0.084 2.9E-06 38.3 2.0 35 65-110 26-60 (101)
379 2j6a_A Protein TRM112; transla 91.5 0.043 1.5E-06 43.2 0.5 28 94-121 105-132 (141)
380 2qrv_A DNA (cytosine-5)-methyl 91.4 0.44 1.5E-05 42.8 7.2 71 177-255 15-90 (295)
381 1qor_A Quinone oxidoreductase; 91.2 0.65 2.2E-05 42.0 8.3 95 172-286 135-240 (327)
382 3fbg_A Putative arginate lyase 91.1 1.5 5.1E-05 40.0 10.7 90 177-284 150-247 (346)
383 3fwz_A Inner membrane protein 91.1 2.1 7.1E-05 33.3 10.2 91 178-285 7-105 (140)
384 2cdc_A Glucose dehydrogenase g 91.0 1.4 4.9E-05 40.5 10.6 86 178-285 181-278 (366)
385 4f3n_A Uncharacterized ACR, CO 90.8 0.58 2E-05 44.2 7.7 45 179-223 139-188 (432)
386 3nx4_A Putative oxidoreductase 90.7 0.69 2.4E-05 41.7 8.0 90 180-285 149-241 (324)
387 2zb4_A Prostaglandin reductase 90.7 1.5 5E-05 40.2 10.3 97 171-285 152-260 (357)
388 3krt_A Crotonyl COA reductase; 90.6 1.2 4E-05 42.5 9.8 96 173-285 224-344 (456)
389 2h6e_A ADH-4, D-arabinose 1-de 90.6 0.5 1.7E-05 43.2 7.0 95 174-285 168-269 (344)
390 4dup_A Quinone oxidoreductase; 90.4 0.91 3.1E-05 41.6 8.6 99 171-286 161-266 (353)
391 2j8z_A Quinone oxidoreductase; 90.3 1.3 4.3E-05 40.6 9.5 97 171-286 156-262 (354)
392 2vn8_A Reticulon-4-interacting 90.2 1.6 5.5E-05 40.3 10.2 95 175-285 181-280 (375)
393 3tqh_A Quinone oxidoreductase; 90.2 1.2 4.1E-05 40.2 9.1 96 171-284 146-244 (321)
394 2cf5_A Atccad5, CAD, cinnamyl 89.9 0.38 1.3E-05 44.3 5.5 98 173-285 175-275 (357)
395 1iz0_A Quinone oxidoreductase; 89.6 0.43 1.5E-05 42.7 5.5 91 175-285 123-218 (302)
396 2akl_A PHNA-like protein PA012 89.6 0.16 5.6E-06 38.9 2.2 30 71-110 27-56 (138)
397 1wly_A CAAR, 2-haloacrylate re 89.4 1.4 4.7E-05 40.0 8.9 96 172-286 140-245 (333)
398 3grk_A Enoyl-(acyl-carrier-pro 89.3 3.6 0.00012 36.4 11.5 104 177-287 30-171 (293)
399 3tjr_A Short chain dehydrogena 89.0 3 0.0001 37.2 10.6 78 176-259 29-119 (301)
400 2jrp_A Putative cytoplasmic pr 88.9 0.21 7.3E-06 35.2 2.3 28 72-110 3-30 (81)
401 1yqd_A Sinapyl alcohol dehydro 88.7 0.62 2.1E-05 43.0 6.1 96 173-285 182-282 (366)
402 2dq4_A L-threonine 3-dehydroge 88.7 0.79 2.7E-05 41.8 6.7 94 172-285 160-262 (343)
403 3c85_A Putative glutathione-re 88.5 4.5 0.00015 32.8 10.7 91 178-285 39-139 (183)
404 4eso_A Putative oxidoreductase 88.5 3.6 0.00012 35.5 10.6 101 177-286 7-139 (255)
405 3gaz_A Alcohol dehydrogenase s 88.3 2.6 8.9E-05 38.3 10.0 95 171-285 144-246 (343)
406 3pxx_A Carveol dehydrogenase; 88.2 5 0.00017 35.1 11.5 103 177-285 9-153 (287)
407 3oig_A Enoyl-[acyl-carrier-pro 88.2 3.8 0.00013 35.5 10.6 106 177-287 6-149 (266)
408 3ioy_A Short-chain dehydrogena 87.9 5.5 0.00019 35.7 11.8 80 177-260 7-99 (319)
409 3ius_A Uncharacterized conserv 87.7 9.4 0.00032 33.1 13.0 70 179-264 6-79 (286)
410 3ijr_A Oxidoreductase, short c 87.6 5.4 0.00018 35.2 11.4 103 177-285 46-182 (291)
411 3h7a_A Short chain dehydrogena 87.6 4.9 0.00017 34.6 10.9 78 177-260 6-95 (252)
412 1qyp_A RNA polymerase II; tran 87.4 0.24 8.3E-06 32.5 1.7 40 71-110 15-55 (57)
413 3j21_g 50S ribosomal protein L 87.2 0.27 9.3E-06 31.4 1.7 29 67-108 10-38 (51)
414 4dcm_A Ribosomal RNA large sub 87.0 4.6 0.00016 37.3 10.9 113 167-289 27-140 (375)
415 3is3_A 17BETA-hydroxysteroid d 86.9 6.1 0.00021 34.3 11.2 105 177-287 17-154 (270)
416 3cc2_Z 50S ribosomal protein L 86.9 0.27 9.2E-06 37.1 1.9 32 69-110 58-90 (116)
417 3llv_A Exopolyphosphatase-rela 86.7 5 0.00017 30.9 9.5 90 178-285 6-103 (141)
418 3me5_A Cytosine-specific methy 86.7 4.9 0.00017 38.5 11.1 72 165-242 69-146 (482)
419 1xa0_A Putative NADPH dependen 86.6 1.3 4.3E-05 40.1 6.7 96 174-285 145-246 (328)
420 1tt7_A YHFP; alcohol dehydroge 86.6 1.6 5.6E-05 39.3 7.5 96 174-285 146-247 (330)
421 3o26_A Salutaridine reductase; 86.6 6.9 0.00024 34.4 11.6 78 177-259 11-102 (311)
422 2k4x_A 30S ribosomal protein S 86.5 0.43 1.5E-05 31.1 2.5 31 71-110 18-48 (55)
423 4a0s_A Octenoyl-COA reductase/ 86.4 3.6 0.00012 38.9 10.1 97 173-285 216-336 (447)
424 3jyw_9 60S ribosomal protein L 86.3 0.48 1.6E-05 32.6 2.7 32 70-110 25-56 (72)
425 3ggo_A Prephenate dehydrogenas 86.2 4.7 0.00016 36.2 10.3 91 178-282 33-125 (314)
426 1twf_L ABC10-alpha, DNA-direct 86.2 0.31 1.1E-05 33.5 1.8 29 68-106 25-53 (70)
427 3lyl_A 3-oxoacyl-(acyl-carrier 86.1 10 0.00035 32.2 12.1 76 178-259 5-93 (247)
428 3gaf_A 7-alpha-hydroxysteroid 85.9 5.9 0.0002 34.1 10.5 78 177-260 11-101 (256)
429 3v2g_A 3-oxoacyl-[acyl-carrier 85.8 9.1 0.00031 33.3 11.8 104 177-286 30-166 (271)
430 3k31_A Enoyl-(acyl-carrier-pro 85.5 3.4 0.00012 36.6 8.9 104 177-287 29-170 (296)
431 2vhw_A Alanine dehydrogenase; 85.4 0.6 2E-05 43.5 3.9 100 177-284 167-267 (377)
432 3r3s_A Oxidoreductase; structu 85.3 5.9 0.0002 35.0 10.4 104 177-286 48-186 (294)
433 3o38_A Short chain dehydrogena 85.3 9 0.00031 33.0 11.4 79 177-260 21-113 (266)
434 3t7c_A Carveol dehydrogenase; 85.2 9.8 0.00034 33.6 11.9 77 177-259 27-128 (299)
435 1pjc_A Protein (L-alanine dehy 85.1 0.78 2.7E-05 42.4 4.5 101 177-286 166-268 (361)
436 4g81_D Putative hexonate dehyd 85.1 6.7 0.00023 34.1 10.3 79 177-261 8-99 (255)
437 1wma_A Carbonyl reductase [NAD 84.9 4.5 0.00015 34.8 9.3 102 178-285 4-138 (276)
438 3tsc_A Putative oxidoreductase 84.7 8.2 0.00028 33.6 11.0 78 177-260 10-113 (277)
439 4fs3_A Enoyl-[acyl-carrier-pro 84.3 7.6 0.00026 33.5 10.4 106 177-287 5-148 (256)
440 3j21_i 50S ribosomal protein L 84.1 0.47 1.6E-05 33.6 1.9 32 70-110 34-65 (83)
441 3edm_A Short chain dehydrogena 84.1 3.5 0.00012 35.7 8.1 103 177-285 7-143 (259)
442 4fgs_A Probable dehydrogenase 83.9 7.5 0.00026 34.2 10.2 100 177-285 28-159 (273)
443 3gqv_A Enoyl reductase; medium 83.9 9.3 0.00032 35.0 11.4 93 176-285 163-263 (371)
444 3flo_B DNA polymerase alpha ca 83.8 0.63 2.1E-05 39.3 2.9 44 65-108 16-59 (206)
445 4imr_A 3-oxoacyl-(acyl-carrier 83.6 6.9 0.00023 34.2 9.9 77 177-259 32-120 (275)
446 1gh9_A 8.3 kDa protein (gene M 83.6 0.55 1.9E-05 32.3 2.0 30 71-111 4-33 (71)
447 1xhl_A Short-chain dehydrogena 83.6 6.8 0.00023 34.7 10.0 80 177-259 25-117 (297)
448 3iz5_m 60S ribosomal protein L 83.5 0.55 1.9E-05 33.9 2.1 32 70-110 35-66 (92)
449 3uve_A Carveol dehydrogenase ( 83.4 9.8 0.00033 33.2 10.9 77 177-259 10-115 (286)
450 2eez_A Alanine dehydrogenase; 83.4 0.9 3.1E-05 42.1 4.1 99 177-284 165-265 (369)
451 3u5t_A 3-oxoacyl-[acyl-carrier 83.3 8.1 0.00028 33.6 10.2 102 178-285 27-161 (267)
452 2gdz_A NAD+-dependent 15-hydro 83.3 10 0.00035 32.7 10.9 105 178-286 7-140 (267)
453 1ja9_A 4HNR, 1,3,6,8-tetrahydr 83.2 5.9 0.0002 34.2 9.3 77 177-259 20-110 (274)
454 1ffk_W Ribosomal protein L37AE 82.9 0.42 1.4E-05 33.0 1.2 32 69-110 25-57 (73)
455 3r1i_A Short-chain type dehydr 82.4 5.4 0.00019 34.9 8.8 78 177-260 31-121 (276)
456 4egf_A L-xylulose reductase; s 82.2 12 0.00041 32.3 10.9 78 177-260 19-110 (266)
457 3h0g_L DNA-directed RNA polyme 82.2 1.1 3.6E-05 30.0 2.9 33 68-110 18-50 (63)
458 3sx2_A Putative 3-ketoacyl-(ac 82.2 8.9 0.00031 33.3 10.1 79 177-261 12-115 (278)
459 3pgx_A Carveol dehydrogenase; 82.1 11 0.00038 32.8 10.8 78 177-260 14-117 (280)
460 3ubt_Y Modification methylase 82.1 2.8 9.5E-05 37.8 6.9 68 179-256 1-69 (331)
461 3izc_m 60S ribosomal protein R 82.1 0.63 2.1E-05 33.6 1.9 32 70-110 35-66 (92)
462 1lss_A TRK system potassium up 82.0 14 0.00049 27.8 10.5 89 178-283 4-100 (140)
463 4ayb_P DNA-directed RNA polyme 81.9 0.86 2.9E-05 28.2 2.2 30 70-106 2-31 (48)
464 1tfi_A Transcriptional elongat 81.8 0.62 2.1E-05 29.7 1.6 40 70-109 8-48 (50)
465 3lf2_A Short chain oxidoreduct 81.8 18 0.00062 31.1 11.9 79 177-259 7-98 (265)
466 3ek2_A Enoyl-(acyl-carrier-pro 81.6 9.1 0.00031 32.9 9.9 104 176-286 12-154 (271)
467 4a17_Y RPL37A, 60S ribosomal p 81.4 0.57 1.9E-05 34.4 1.5 32 70-110 35-66 (103)
468 3ce6_A Adenosylhomocysteinase; 81.2 4.1 0.00014 39.2 7.9 89 175-284 271-360 (494)
469 4e6p_A Probable sorbitol dehyd 81.1 15 0.00052 31.4 11.1 74 177-259 7-93 (259)
470 1geg_A Acetoin reductase; SDR 80.8 7.4 0.00025 33.4 9.0 75 178-258 2-89 (256)
471 3l9w_A Glutathione-regulated p 80.8 9.5 0.00032 35.7 10.2 93 178-287 4-104 (413)
472 3f9i_A 3-oxoacyl-[acyl-carrier 80.5 17 0.00057 30.8 11.1 75 176-259 12-95 (249)
473 4da9_A Short-chain dehydrogena 79.9 14 0.00047 32.3 10.5 76 177-258 28-117 (280)
474 3p2y_A Alanine dehydrogenase/p 79.8 0.78 2.7E-05 42.6 2.3 95 177-283 183-300 (381)
475 4ibo_A Gluconate dehydrogenase 79.7 9.9 0.00034 33.1 9.5 78 177-260 25-115 (271)
476 3h0g_I DNA-directed RNA polyme 79.3 1.7 5.7E-05 32.9 3.6 38 71-113 4-41 (113)
477 3oec_A Carveol dehydrogenase ( 79.2 13 0.00046 33.0 10.4 77 177-259 45-146 (317)
478 3oid_A Enoyl-[acyl-carrier-pro 79.1 18 0.0006 31.1 10.9 76 178-259 4-93 (258)
479 1gee_A Glucose 1-dehydrogenase 79.1 10 0.00035 32.4 9.3 76 178-259 7-96 (261)
480 3e8x_A Putative NAD-dependent 79.1 14 0.00047 31.0 10.0 77 177-265 20-101 (236)
481 3gvc_A Oxidoreductase, probabl 79.0 12 0.00042 32.6 9.9 75 177-260 28-115 (277)
482 3t4x_A Oxidoreductase, short c 79.0 18 0.0006 31.2 10.9 80 177-260 9-97 (267)
483 4a27_A Synaptic vesicle membra 79.0 3.8 0.00013 37.3 6.7 98 169-285 134-238 (349)
484 1wii_A Hypothetical UPF0222 pr 78.9 0.79 2.7E-05 32.7 1.6 42 67-111 19-60 (85)
485 3k1f_M Transcription initiatio 78.5 1.1 3.7E-05 36.4 2.4 31 70-109 20-53 (197)
486 1g0o_A Trihydroxynaphthalene r 78.1 15 0.00052 31.9 10.3 103 178-286 29-164 (283)
487 3l77_A Short-chain alcohol deh 78.0 24 0.00081 29.5 11.2 78 178-261 2-93 (235)
488 1l7d_A Nicotinamide nucleotide 77.8 1.7 5.8E-05 40.4 4.0 42 177-219 171-213 (384)
489 1spx_A Short-chain reductase f 77.4 5.9 0.0002 34.5 7.3 78 178-258 6-96 (278)
490 1vd4_A Transcription initiatio 77.3 0.8 2.7E-05 30.1 1.2 41 69-111 12-52 (62)
491 6rxn_A Rubredoxin; electron tr 77.1 1.8 6.3E-05 26.9 2.7 36 70-106 3-38 (46)
492 2km1_A Protein DRE2; yeast, an 77.1 2 6.7E-05 33.6 3.5 41 243-283 54-96 (136)
493 2x9g_A PTR1, pteridine reducta 77.0 15 0.00052 32.0 9.9 75 178-258 23-116 (288)
494 1zsy_A Mitochondrial 2-enoyl t 76.9 11 0.00038 34.2 9.3 99 169-284 159-269 (357)
495 3f1l_A Uncharacterized oxidore 76.8 27 0.00091 29.7 11.3 77 177-258 11-102 (252)
496 4dmm_A 3-oxoacyl-[acyl-carrier 76.6 18 0.00062 31.3 10.2 78 177-260 27-118 (269)
497 3ksu_A 3-oxoacyl-acyl carrier 76.5 10 0.00036 32.7 8.6 103 177-285 10-147 (262)
498 3ppi_A 3-hydroxyacyl-COA dehyd 76.3 37 0.0013 29.2 12.6 70 177-255 29-110 (281)
499 2kn9_A Rubredoxin; metalloprot 76.2 4.4 0.00015 28.5 4.7 41 66-106 22-68 (81)
500 1xg5_A ARPG836; short chain de 75.8 28 0.00094 30.1 11.3 78 178-259 32-122 (279)
No 1
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.92 E-value=7.5e-25 Score=211.32 Aligned_cols=170 Identities=10% Similarity=0.091 Sum_probs=127.7
Q ss_pred HHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCC
Q 018003 165 EFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF 244 (362)
Q Consensus 165 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~ 244 (362)
..+.+.+.+...++.+|||||||+|.++..+++.+. +++|+|+|+.+++.|+++ .. ......+...+...+|+
T Consensus 95 ~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~g~--~v~gvD~s~~~~~~a~~~--~~---~~~~~~~~~~~~~~l~~ 167 (416)
T 4e2x_A 95 LARDFLATELTGPDPFIVEIGCNDGIMLRTIQEAGV--RHLGFEPSSGVAAKAREK--GI---RVRTDFFEKATADDVRR 167 (416)
T ss_dssp HHHHHHHTTTCSSSCEEEEETCTTTTTHHHHHHTTC--EEEEECCCHHHHHHHHTT--TC---CEECSCCSHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCEEEEecCCCCHHHHHHHHcCC--cEEEECCCHHHHHHHHHc--CC---CcceeeechhhHhhccc
Confidence 345677777777789999999999999999999876 999999999999999875 00 00111122344445566
Q ss_pred CCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhcccccccccccCCHHHH
Q 018003 245 ASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVGFSIPVLGFDDL 324 (362)
Q Consensus 245 ~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l 324 (362)
++++||+|++.+++||++|+..+++++.++|||||++++.+++... .... ......+.. |..+++.+++
T Consensus 168 ~~~~fD~I~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~------~~~~----~~~~~~~~~-~~~~~s~~~l 236 (416)
T 4e2x_A 168 TEGPANVIYAANTLCHIPYVQSVLEGVDALLAPDGVFVFEDPYLGD------IVAK----TSFDQIFDE-HFFLFSATSV 236 (416)
T ss_dssp HHCCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEEEECHHH------HHHH----TCGGGCSTT-CCEECCHHHH
T ss_pred CCCCEEEEEECChHHhcCCHHHHHHHHHHHcCCCeEEEEEeCChHH------hhhh----cchhhhhhh-hhhcCCHHHH
Confidence 7789999999999999999999999999999999999999886421 1110 000111223 7888999999
Q ss_pred HHHHHHCCCEEEEEEEe----ceeEEEEeeCc
Q 018003 325 KRIFRQFQLVVNLKLFY----GHIQHYIVKIP 352 (362)
Q Consensus 325 ~~ll~~~Gf~~v~~~~~----g~~~~~~~~kp 352 (362)
.++++++||++++.... |....+..++.
T Consensus 237 ~~ll~~aGf~~~~~~~~~~~~g~l~~~~~~~~ 268 (416)
T 4e2x_A 237 QGMAQRCGFELVDVQRLPVHGGEVRYTLARQG 268 (416)
T ss_dssp HHHHHHTTEEEEEEEEECGGGSEEEEEEEETT
T ss_pred HHHHHHcCCEEEEEEEccCCCCEEEEEEEeCC
Confidence 99999999999887763 44555655543
No 2
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.90 E-value=4.3e-23 Score=186.22 Aligned_cols=166 Identities=17% Similarity=0.228 Sum_probs=133.6
Q ss_pred HHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCC
Q 018003 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 245 (362)
Q Consensus 166 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~ 245 (362)
++.+.+.+...++.+|||+|||+|.++..+++.+. +++|+|+|+.|++.|++++... ...++.++++|+..+|++
T Consensus 26 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~~~~~~~---~~~~v~~~~~d~~~l~~~ 100 (260)
T 1vl5_A 26 LAKLMQIAALKGNEEVLDVATGGGHVANAFAPFVK--KVVAFDLTEDILKVARAFIEGN---GHQQVEYVQGDAEQMPFT 100 (260)
T ss_dssp HHHHHHHHTCCSCCEEEEETCTTCHHHHHHGGGSS--EEEEEESCHHHHHHHHHHHHHT---TCCSEEEEECCC-CCCSC
T ss_pred HHHHHHHhCCCCCCEEEEEeCCCCHHHHHHHHhCC--EEEEEeCCHHHHHHHHHHHHhc---CCCceEEEEecHHhCCCC
Confidence 45667777777889999999999999999999876 9999999999999999988765 135799999999999999
Q ss_pred CCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhcccccccccccCCHHHHH
Q 018003 246 SSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVGFSIPVLGFDDLK 325 (362)
Q Consensus 246 ~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~ 325 (362)
+++||+|++..+++|++|+..+|+++.++|||||++++.++..... +....+..... ...... +..+++.+++.
T Consensus 101 ~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~~~~~~~----~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~ 174 (260)
T 1vl5_A 101 DERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDNSAPEN----DAFDVFYNYVE-KERDYS-HHRAWKKSDWL 174 (260)
T ss_dssp TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEBCSS----HHHHHHHHHHH-HHHCTT-CCCCCBHHHHH
T ss_pred CCCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEEcCCCCC----HHHHHHHHHHH-HhcCcc-ccCCCCHHHHH
Confidence 9999999999999999999999999999999999999988765332 22222221111 001122 56789999999
Q ss_pred HHHHHCCCEEEEEEEec
Q 018003 326 RIFRQFQLVVNLKLFYG 342 (362)
Q Consensus 326 ~ll~~~Gf~~v~~~~~g 342 (362)
++|+++||+++......
T Consensus 175 ~~l~~aGf~~~~~~~~~ 191 (260)
T 1vl5_A 175 KMLEEAGFELEELHCFH 191 (260)
T ss_dssp HHHHHHTCEEEEEEEEE
T ss_pred HHHHHCCCeEEEEEEee
Confidence 99999999887766554
No 3
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.90 E-value=1.7e-22 Score=182.42 Aligned_cols=174 Identities=12% Similarity=0.118 Sum_probs=129.7
Q ss_pred CCCCeEEEEcCccchHHHHHHHhC--CCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCCCCcceEEE
Q 018003 176 VLGGNIIDASCGSGLFSRIFAKSG--LFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVH 253 (362)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~~~~fD~V~ 253 (362)
.++.+|||+|||+|.++..+++.. ++.+|+|+|+|+.|++.|++++... ....++.++++|+.++|++ .||+|+
T Consensus 69 ~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~--~~~~~v~~~~~D~~~~~~~--~~d~v~ 144 (261)
T 4gek_A 69 QPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAY--KAPTPVDVIEGDIRDIAIE--NASMVV 144 (261)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTS--CCSSCEEEEESCTTTCCCC--SEEEEE
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhh--ccCceEEEeeccccccccc--ccccce
Confidence 458899999999999999998873 4569999999999999999998765 2346899999999998864 599999
Q ss_pred ecccccCCCCH--HHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhh-----cc------cccccccccCC
Q 018003 254 AGAAIHCWSSP--STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFL-----DL------KIVGFSIPVLG 320 (362)
Q Consensus 254 ~~~vl~h~~d~--~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~-----~~------~~~~~~~~~~s 320 (362)
++.+++|++++ ..+|++++++|||||+|++.+............+..+...+.. .. .........++
T Consensus 145 ~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~~~~~~~~~~~~~~~~~~~~~~g~s~~ei~~~~~~l~~~~~~~s 224 (261)
T 4gek_A 145 LNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFSFEDAKVGELLFNMHHDFKRANGYSELEISQKRSMLENVMLTDS 224 (261)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCSSHHHHHHHHHHHHHHHHHTTGGGSTTHHHHHHHHHHCCCBC
T ss_pred eeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEeccCCCCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhhcccccCCC
Confidence 99999999765 4789999999999999999988764322222222111111100 00 00011345578
Q ss_pred HHHHHHHHHHCCCEEEEEEE-eceeEEEEeeCcc
Q 018003 321 FDDLKRIFRQFQLVVNLKLF-YGHIQHYIVKIPS 353 (362)
Q Consensus 321 ~~~l~~ll~~~Gf~~v~~~~-~g~~~~~~~~kp~ 353 (362)
.+++.++|+++||+.++.++ +..+..+++.|+.
T Consensus 225 ~~~~~~~L~~AGF~~ve~~fq~~nF~~~iA~K~~ 258 (261)
T 4gek_A 225 VETHKARLHKAGFEHSELWFQCFNFGSLVALKAE 258 (261)
T ss_dssp HHHHHHHHHHHTCSEEEEEEEETTEEEEEEECCT
T ss_pred HHHHHHHHHHcCCCeEEEEEEeccEEEEEEEEcC
Confidence 99999999999998887653 4456777888875
No 4
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.89 E-value=7.3e-22 Score=181.65 Aligned_cols=166 Identities=15% Similarity=0.075 Sum_probs=133.6
Q ss_pred HHHHHHhhc----CCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCC
Q 018003 165 EFELMKGYL----KPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADIS 240 (362)
Q Consensus 165 ~~~~l~~~l----~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~ 240 (362)
..+.+.+.+ ...++.+|||+|||+|.++..+++.. +.+++|+|+|+.+++.|++++... +...++.++++|+.
T Consensus 66 ~~~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~--~~~~~~~~~~~d~~ 142 (297)
T 2o57_A 66 TDEWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKF-GVSIDCLNIAPVQNKRNEEYNNQA--GLADNITVKYGSFL 142 (297)
T ss_dssp HHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHH--TCTTTEEEEECCTT
T ss_pred HHHHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHhc--CCCcceEEEEcCcc
Confidence 345666666 66678999999999999999999872 249999999999999999988765 22457999999999
Q ss_pred CCCCCCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhcccccccccccCC
Q 018003 241 RLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVGFSIPVLG 320 (362)
Q Consensus 241 ~~p~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 320 (362)
.+|+++++||+|++..+++|++++..+++++.++|||||++++.++........ .....+..... ...+.+
T Consensus 143 ~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~-~~~~~~~~~~~--------~~~~~~ 213 (297)
T 2o57_A 143 EIPCEDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDPMKEDGIDK-SSIQPILDRIK--------LHDMGS 213 (297)
T ss_dssp SCSSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEECTTCCG-GGGHHHHHHHT--------CSSCCC
T ss_pred cCCCCCCCEeEEEecchhhhcCCHHHHHHHHHHHcCCCeEEEEEEeccCCCCch-HHHHHHHHHhc--------CCCCCC
Confidence 999989999999999999999999999999999999999999999876543221 12222222211 234679
Q ss_pred HHHHHHHHHHCCCEEEEEEEec
Q 018003 321 FDDLKRIFRQFQLVVNLKLFYG 342 (362)
Q Consensus 321 ~~~l~~ll~~~Gf~~v~~~~~g 342 (362)
..++.++++++||++++.....
T Consensus 214 ~~~~~~~l~~aGf~~~~~~~~~ 235 (297)
T 2o57_A 214 LGLYRSLAKECGLVTLRTFSRP 235 (297)
T ss_dssp HHHHHHHHHHTTEEEEEEEECH
T ss_pred HHHHHHHHHHCCCeEEEEEECc
Confidence 9999999999999998876543
No 5
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.89 E-value=5.2e-22 Score=174.28 Aligned_cols=166 Identities=17% Similarity=0.180 Sum_probs=138.1
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCC
Q 018003 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSG-LFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 245 (362)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~ 245 (362)
+.+.+.+...++.+|||+|||+|.++..+++.+ +..+++|+|+|+.+++.+++++... ...++.++.+|+..++++
T Consensus 27 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~~~d~~~~~~~ 103 (219)
T 3dh0_A 27 EKVLKEFGLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKL---GLKNVEVLKSEENKIPLP 103 (219)
T ss_dssp HHHHHHHTCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHH---TCTTEEEEECBTTBCSSC
T ss_pred HHHHHHhCCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHc---CCCcEEEEecccccCCCC
Confidence 456666677778899999999999999999885 5669999999999999999998776 134799999999999988
Q ss_pred CCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhcccccccccccCCHHHHH
Q 018003 246 SSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVGFSIPVLGFDDLK 325 (362)
Q Consensus 246 ~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~ 325 (362)
+++||+|++..+++|++++..+++++.++|||||.+++.++...... .... +..+++.+++.
T Consensus 104 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~-----------------~~~~-~~~~~~~~~~~ 165 (219)
T 3dh0_A 104 DNTVDFIFMAFTFHELSEPLKFLEELKRVAKPFAYLAIIDWKKEERD-----------------KGPP-PEEVYSEWEVG 165 (219)
T ss_dssp SSCEEEEEEESCGGGCSSHHHHHHHHHHHEEEEEEEEEEEECSSCCS-----------------SSCC-GGGSCCHHHHH
T ss_pred CCCeeEEEeehhhhhcCCHHHHHHHHHHHhCCCeEEEEEEecccccc-----------------cCCc-hhcccCHHHHH
Confidence 89999999999999999999999999999999999999988764321 1111 45678999999
Q ss_pred HHHHHCCCEEEEEEEecee-EEEEeeCcc
Q 018003 326 RIFRQFQLVVNLKLFYGHI-QHYIVKIPS 353 (362)
Q Consensus 326 ~ll~~~Gf~~v~~~~~g~~-~~~~~~kp~ 353 (362)
++++++||++++....+.. ..++.+|+.
T Consensus 166 ~~l~~~Gf~~~~~~~~~~~~~~~~~~k~~ 194 (219)
T 3dh0_A 166 LILEDAGIRVGRVVEVGKYCFGVYAMIVK 194 (219)
T ss_dssp HHHHHTTCEEEEEEEETTTEEEEEEECC-
T ss_pred HHHHHCCCEEEEEEeeCCceEEEEEEecc
Confidence 9999999999887776544 455556653
No 6
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.89 E-value=5.9e-22 Score=175.78 Aligned_cols=185 Identities=12% Similarity=0.131 Sum_probs=139.3
Q ss_pred HHHHHHHHhhcC-CCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCC
Q 018003 163 EKEFELMKGYLK-PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR 241 (362)
Q Consensus 163 ~~~~~~l~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~ 241 (362)
....+.+...+. ..++.+|||+|||+|.++..+++..+..+++|+|+|+.+++.|++++... .++.++++|+..
T Consensus 29 ~~~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~d~~~ 103 (234)
T 3dtn_A 29 DDFYGVSVSIASVDTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGN-----LKVKYIEADYSK 103 (234)
T ss_dssp HHHHHHHHHTCCCSCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSC-----TTEEEEESCTTT
T ss_pred HHHHHHHHHHhhcCCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccC-----CCEEEEeCchhc
Confidence 334456666665 45678999999999999999999977779999999999999999987654 389999999999
Q ss_pred CCCCCCcceEEEecccccCCCCHH--HHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhh-----------hc
Q 018003 242 LPFASSSIDAVHAGAAIHCWSSPS--TGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCF-----------LD 308 (362)
Q Consensus 242 ~p~~~~~fD~V~~~~vl~h~~d~~--~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~-----------~~ 308 (362)
++++ ++||+|++..+++|++++. .+++++.++|||||++++.++.................... ..
T Consensus 104 ~~~~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (234)
T 3dtn_A 104 YDFE-EKYDMVVSALSIHHLEDEDKKELYKRSYSILKESGIFINADLVHGETAFIENLNKTIWRQYVENSGLTEEEIAAG 182 (234)
T ss_dssp CCCC-SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHHHHHTSSCCHHHHHTT
T ss_pred cCCC-CCceEEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCChhhhhHHHHHHHHHHHhcCCCHHHHHHH
Confidence 9877 8999999999999998776 59999999999999999999876543211111111110000 00
Q ss_pred ccccccccccCCHHHHHHHHHHCCCEEEEEEEe-ceeEEEEeeCccc
Q 018003 309 LKIVGFSIPVLGFDDLKRIFRQFQLVVNLKLFY-GHIQHYIVKIPSL 354 (362)
Q Consensus 309 ~~~~~~~~~~~s~~~l~~ll~~~Gf~~v~~~~~-g~~~~~~~~kp~~ 354 (362)
+.... +...++.+++.++|+++||+.++.... ..+..+...++..
T Consensus 183 ~~~~~-~~~~~~~~~~~~ll~~aGF~~v~~~~~~~~~~~~~~~~~~~ 228 (234)
T 3dtn_A 183 YERSK-LDKDIEMNQQLNWLKEAGFRDVSCIYKYYQFAVMFGRKTEG 228 (234)
T ss_dssp C-----CCCCCBHHHHHHHHHHTTCEEEEEEEEETTEEEEEEECC--
T ss_pred HHhcc-cccccCHHHHHHHHHHcCCCceeeeeeecceeEEEEEeccc
Confidence 01112 667789999999999999999877654 4457777777653
No 7
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.89 E-value=1e-22 Score=178.22 Aligned_cols=183 Identities=16% Similarity=0.185 Sum_probs=140.8
Q ss_pred HHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC
Q 018003 164 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP 243 (362)
Q Consensus 164 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p 243 (362)
...+.+.+.+...++ +|||+|||+|.++..+++. +..+++|+|+|+.+++.|++++... +...++.++++|+..++
T Consensus 31 ~~~~~~~~~~~~~~~-~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~--~~~~~~~~~~~d~~~~~ 106 (219)
T 3dlc_A 31 IIAENIINRFGITAG-TCIDIGSGPGALSIALAKQ-SDFSIRALDFSKHMNEIALKNIADA--NLNDRIQIVQGDVHNIP 106 (219)
T ss_dssp HHHHHHHHHHCCCEE-EEEEETCTTSHHHHHHHHH-SEEEEEEEESCHHHHHHHHHHHHHT--TCTTTEEEEECBTTBCS
T ss_pred HHHHHHHHhcCCCCC-EEEEECCCCCHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHhc--cccCceEEEEcCHHHCC
Confidence 445666777766555 9999999999999999998 4469999999999999999998775 22458999999999999
Q ss_pred CCCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhH-HHHHhhhhcc-cccccccccCCH
Q 018003 244 FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSR-LLRQVCFLDL-KIVGFSIPVLGF 321 (362)
Q Consensus 244 ~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~s~ 321 (362)
+++++||+|++..+++|++++..+++++.++|||||.+++.++.... ....... ....... .+ .....+..+++.
T Consensus 107 ~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 183 (219)
T 3dlc_A 107 IEDNYADLIVSRGSVFFWEDVATAFREIYRILKSGGKTYIGGGFGNK--ELRDSISAEMIRKNP-DWKEFNRKNISQENV 183 (219)
T ss_dssp SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEECCSSH--HHHHHHHHHHHHHCT-THHHHHHHHSSHHHH
T ss_pred CCcccccEEEECchHhhccCHHHHHHHHHHhCCCCCEEEEEeccCcH--HHHHHHHHHHHHhHH-HHHhhhhhccccCCH
Confidence 98999999999999999999999999999999999999998765432 1111111 1111100 00 000014566789
Q ss_pred HHHHHHHHHCCCEEEEEEEeceeEEEEeeCcc
Q 018003 322 DDLKRIFRQFQLVVNLKLFYGHIQHYIVKIPS 353 (362)
Q Consensus 322 ~~l~~ll~~~Gf~~v~~~~~g~~~~~~~~kp~ 353 (362)
+++.++|+++||++++........+...+|+.
T Consensus 184 ~~~~~~l~~aGf~~v~~~~~~~~~~~~~~k~~ 215 (219)
T 3dlc_A 184 ERFQNVLDEIGISSYEIILGDEGFWIIISKTD 215 (219)
T ss_dssp HHHHHHHHHHTCSSEEEEEETTEEEEEEBCCS
T ss_pred HHHHHHHHHcCCCeEEEEecCCceEEEEeccc
Confidence 99999999999999888877777777777764
No 8
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.89 E-value=1.2e-21 Score=177.84 Aligned_cols=168 Identities=23% Similarity=0.276 Sum_probs=135.2
Q ss_pred HHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCC
Q 018003 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 245 (362)
Q Consensus 166 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~ 245 (362)
.+.+.+.+...++.+|||||||+|.++..+++.. ..+++|+|+|+.+++.+++++... +...++.++.+|+..+|++
T Consensus 50 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~--~~~~~~~~~~~d~~~~~~~ 126 (273)
T 3bus_A 50 TDEMIALLDVRSGDRVLDVGCGIGKPAVRLATAR-DVRVTGISISRPQVNQANARATAA--GLANRVTFSYADAMDLPFE 126 (273)
T ss_dssp HHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHS-CCEEEEEESCHHHHHHHHHHHHHT--TCTTTEEEEECCTTSCCSC
T ss_pred HHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHHHhc--CCCcceEEEECccccCCCC
Confidence 4566777777788999999999999999998864 469999999999999999988765 2235799999999999998
Q ss_pred CCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhcccccccccccCCHHHHH
Q 018003 246 SSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVGFSIPVLGFDDLK 325 (362)
Q Consensus 246 ~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~ 325 (362)
+++||+|++..+++|++++..+++++.++|||||++++.++...... ..........+. ...+ +..+++.+++.
T Consensus 127 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~--~~~~~~~~~~~~---~~~~-~~~~~~~~~~~ 200 (273)
T 3bus_A 127 DASFDAVWALESLHHMPDRGRALREMARVLRPGGTVAIADFVLLAPV--EGAKKEAVDAFR---AGGG-VLSLGGIDEYE 200 (273)
T ss_dssp TTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEEEEESSCC--CHHHHHHHHHHH---HHHT-CCCCCCHHHHH
T ss_pred CCCccEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEEeeccCCC--ChhHHHHHHHHH---hhcC-ccCCCCHHHHH
Confidence 89999999999999999999999999999999999999998764321 111111111111 1112 56789999999
Q ss_pred HHHHHCCCEEEEEEEec
Q 018003 326 RIFRQFQLVVNLKLFYG 342 (362)
Q Consensus 326 ~ll~~~Gf~~v~~~~~g 342 (362)
++++++||++++....+
T Consensus 201 ~~l~~aGf~~~~~~~~~ 217 (273)
T 3bus_A 201 SDVRQAELVVTSTVDIS 217 (273)
T ss_dssp HHHHHTTCEEEEEEECH
T ss_pred HHHHHcCCeEEEEEECc
Confidence 99999999998776654
No 9
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.89 E-value=8.3e-22 Score=175.69 Aligned_cols=165 Identities=19% Similarity=0.238 Sum_probs=134.0
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCCC
Q 018003 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 246 (362)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~~ 246 (362)
..+.+.+...++.+|||+|||+|.++..+++.+. +++|+|+|+.+++.+++++... ...++.++++|++.+|+++
T Consensus 11 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~---~~~~v~~~~~d~~~~~~~~ 85 (239)
T 1xxl_A 11 GLMIKTAECRAEHRVLDIGAGAGHTALAFSPYVQ--ECIGVDATKEMVEVASSFAQEK---GVENVRFQQGTAESLPFPD 85 (239)
T ss_dssp HHHHHHHTCCTTCEEEEESCTTSHHHHHHGGGSS--EEEEEESCHHHHHHHHHHHHHH---TCCSEEEEECBTTBCCSCT
T ss_pred chHHHHhCcCCCCEEEEEccCcCHHHHHHHHhCC--EEEEEECCHHHHHHHHHHHHHc---CCCCeEEEecccccCCCCC
Confidence 4556677778899999999999999999999876 9999999999999999988765 1357999999999999988
Q ss_pred CcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhcccccccccccCCHHHHHH
Q 018003 247 SSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVGFSIPVLGFDDLKR 326 (362)
Q Consensus 247 ~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ 326 (362)
++||+|++..+++|++|+..+++++.++|||||++++.++..... +....+...... ..... |...++.+++.+
T Consensus 86 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~----~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~ 159 (239)
T 1xxl_A 86 DSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDHYAPED----PVLDEFVNHLNR-LRDPS-HVRESSLSEWQA 159 (239)
T ss_dssp TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECBCSS----HHHHHHHHHHHH-HHCTT-CCCCCBHHHHHH
T ss_pred CcEEEEEECCchhhccCHHHHHHHHHHHcCCCcEEEEEEcCCCCC----hhHHHHHHHHHH-hcccc-ccCCCCHHHHHH
Confidence 999999999999999999999999999999999999998875432 222222221110 01122 677889999999
Q ss_pred HHHHCCCEEEEEEEec
Q 018003 327 IFRQFQLVVNLKLFYG 342 (362)
Q Consensus 327 ll~~~Gf~~v~~~~~g 342 (362)
+|+++||+++......
T Consensus 160 ll~~aGf~~~~~~~~~ 175 (239)
T 1xxl_A 160 MFSANQLAYQDIQKWN 175 (239)
T ss_dssp HHHHTTEEEEEEEEEE
T ss_pred HHHHCCCcEEEEEeec
Confidence 9999999987766543
No 10
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.89 E-value=1.9e-22 Score=177.14 Aligned_cols=175 Identities=17% Similarity=0.139 Sum_probs=129.7
Q ss_pred HHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCCCC
Q 018003 168 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASS 247 (362)
Q Consensus 168 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~~~ 247 (362)
.+++.+...++.+|||+|||+|.++..+++.+. +++|+|+++.+++.+++++. .++.++++|+..++++ +
T Consensus 36 ~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~-------~~~~~~~~d~~~~~~~-~ 105 (220)
T 3hnr_A 36 DILEDVVNKSFGNVLEFGVGTGNLTNKLLLAGR--TVYGIEPSREMRMIAKEKLP-------KEFSITEGDFLSFEVP-T 105 (220)
T ss_dssp HHHHHHHHTCCSEEEEECCTTSHHHHHHHHTTC--EEEEECSCHHHHHHHHHHSC-------TTCCEESCCSSSCCCC-S
T ss_pred HHHHHhhccCCCeEEEeCCCCCHHHHHHHhCCC--eEEEEeCCHHHHHHHHHhCC-------CceEEEeCChhhcCCC-C
Confidence 444444445688999999999999999999865 99999999999999998742 3788999999999887 8
Q ss_pred cceEEEecccccCCCCHHH--HHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhcccccccccccCCHHHHH
Q 018003 248 SIDAVHAGAAIHCWSSPST--GVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVGFSIPVLGFDDLK 325 (362)
Q Consensus 248 ~fD~V~~~~vl~h~~d~~~--~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~ 325 (362)
+||+|++..+++|++++.. +|+++.++|||||.+++.++...............................+++.+++.
T Consensus 106 ~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (220)
T 3hnr_A 106 SIDTIVSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQ 185 (220)
T ss_dssp CCSEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHH
T ss_pred CeEEEEECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHH
Confidence 9999999999999999977 99999999999999999998765322111111111111100000001134567999999
Q ss_pred HHHHHCCCEEEEEEEeceeEEEEeeCc
Q 018003 326 RIFRQFQLVVNLKLFYGHIQHYIVKIP 352 (362)
Q Consensus 326 ~ll~~~Gf~~v~~~~~g~~~~~~~~kp 352 (362)
++|+++||+++.....+.......+++
T Consensus 186 ~~l~~aGf~v~~~~~~~~~w~~~~~~~ 212 (220)
T 3hnr_A 186 TIFENNGFHVTFTRLNHFVWVMEATKQ 212 (220)
T ss_dssp HHHHHTTEEEEEEECSSSEEEEEEEEC
T ss_pred HHHHHCCCEEEEeeccceEEEEeehhh
Confidence 999999998877666554444444444
No 11
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.88 E-value=7.1e-22 Score=178.32 Aligned_cols=167 Identities=13% Similarity=0.110 Sum_probs=135.9
Q ss_pred CcHHHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCC
Q 018003 161 GPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADIS 240 (362)
Q Consensus 161 ~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~ 240 (362)
........+.+.+...++.+|||+|||+|.++..+++.. ..+|+|+|+|+.+++.|+++.... .++.++++|+.
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~d~~ 112 (266)
T 3ujc_A 39 GGLEATKKILSDIELNENSKVLDIGSGLGGGCMYINEKY-GAHTHGIDICSNIVNMANERVSGN-----NKIIFEANDIL 112 (266)
T ss_dssp THHHHHHHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHTCCSC-----TTEEEEECCTT
T ss_pred chHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhhcC-----CCeEEEECccc
Confidence 334556777888877788999999999999999999973 349999999999999999875432 68999999999
Q ss_pred CCCCCCCcceEEEecccccCC--CCHHHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhccccccccccc
Q 018003 241 RLPFASSSIDAVHAGAAIHCW--SSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVGFSIPV 318 (362)
Q Consensus 241 ~~p~~~~~fD~V~~~~vl~h~--~d~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (362)
.+|+++++||+|++..+++|+ +++..+++++.++|||||.+++.++.................. . +..+
T Consensus 113 ~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~--------~-~~~~ 183 (266)
T 3ujc_A 113 TKEFPENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCATEKENWDDEFKEYVKQ--------R-KYTL 183 (266)
T ss_dssp TCCCCTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEESCGGGCCHHHHHHHHH--------H-TCCC
T ss_pred cCCCCCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEeccCCcccchHHHHHHHhc--------C-CCCC
Confidence 999989999999999999999 7889999999999999999999998765422222222221111 1 5678
Q ss_pred CCHHHHHHHHHHCCCEEEEEEEec
Q 018003 319 LGFDDLKRIFRQFQLVVNLKLFYG 342 (362)
Q Consensus 319 ~s~~~l~~ll~~~Gf~~v~~~~~g 342 (362)
++.+++.++++++||++++....+
T Consensus 184 ~~~~~~~~~l~~~Gf~~~~~~~~~ 207 (266)
T 3ujc_A 184 ITVEEYADILTACNFKNVVSKDLS 207 (266)
T ss_dssp CCHHHHHHHHHHTTCEEEEEEECH
T ss_pred CCHHHHHHHHHHcCCeEEEEEeCC
Confidence 899999999999999998876544
No 12
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.88 E-value=1.2e-21 Score=176.08 Aligned_cols=167 Identities=16% Similarity=0.135 Sum_probs=134.5
Q ss_pred CcHHHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCC
Q 018003 161 GPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADIS 240 (362)
Q Consensus 161 ~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~ 240 (362)
......+.+...+...++.+|||+|||+|.++..+++.. ..+++|+|+|+.+++.|+++++.. +...++.++++|+.
T Consensus 20 ~~~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~l~~a~~~~~~~--~~~~~v~~~~~d~~ 96 (256)
T 1nkv_A 20 FTEEKYATLGRVLRMKPGTRILDLGSGSGEMLCTWARDH-GITGTGIDMSSLFTAQAKRRAEEL--GVSERVHFIHNDAA 96 (256)
T ss_dssp CCHHHHHHHHHHTCCCTTCEEEEETCTTCHHHHHHHHHT-CCEEEEEESCHHHHHHHHHHHHHT--TCTTTEEEEESCCT
T ss_pred CCHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhc--CCCcceEEEECChH
Confidence 335556778888887889999999999999999999874 359999999999999999988765 22357999999999
Q ss_pred CCCCCCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhcccccccccccCC
Q 018003 241 RLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVGFSIPVLG 320 (362)
Q Consensus 241 ~~p~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 320 (362)
.+++ +++||+|++..+++|++++..+|+++.++|||||++++.++.......... +...+ .... +..+++
T Consensus 97 ~~~~-~~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~----~~~~~----~~~~-~~~~~~ 166 (256)
T 1nkv_A 97 GYVA-NEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGEPYWRQLPATEE----IAQAC----GVSS-TSDFLT 166 (256)
T ss_dssp TCCC-SSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEEEEETTCCSSHH----HHHTT----TCSC-GGGSCC
T ss_pred hCCc-CCCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEecCcccCCCChHH----HHHHH----hccc-ccccCC
Confidence 9887 789999999999999999999999999999999999999886543211111 11111 1112 557889
Q ss_pred HHHHHHHHHHCCCEEEEEEE
Q 018003 321 FDDLKRIFRQFQLVVNLKLF 340 (362)
Q Consensus 321 ~~~l~~ll~~~Gf~~v~~~~ 340 (362)
..++.++++++||++++...
T Consensus 167 ~~~~~~~l~~aGf~~~~~~~ 186 (256)
T 1nkv_A 167 LPGLVGAFDDLGYDVVEMVL 186 (256)
T ss_dssp HHHHHHHHHTTTBCCCEEEE
T ss_pred HHHHHHHHHHCCCeeEEEEe
Confidence 99999999999998877543
No 13
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.88 E-value=4.2e-21 Score=173.86 Aligned_cols=169 Identities=14% Similarity=0.153 Sum_probs=134.9
Q ss_pred CCcHHHHHHHHhhcC-CCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEec
Q 018003 160 PGPEKEFELMKGYLK-PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRAD 238 (362)
Q Consensus 160 ~~~~~~~~~l~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d 238 (362)
+........+...+. ..++.+|||||||+|.++..+++. +..+|+|+|+|+.+++.|+++++.. +...++.++++|
T Consensus 28 ~~~~~~~~~~l~~l~~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gvD~s~~~~~~a~~~~~~~--~~~~~v~~~~~d 104 (267)
T 3kkz_A 28 PGSPEVTLKALSFIDNLTEKSLIADIGCGTGGQTMVLAGH-VTGQVTGLDFLSGFIDIFNRNARQS--GLQNRVTGIVGS 104 (267)
T ss_dssp SCCHHHHHHHHTTCCCCCTTCEEEEETCTTCHHHHHHHTT-CSSEEEEEESCHHHHHHHHHHHHHT--TCTTTEEEEECC
T ss_pred CCCHHHHHHHHHhcccCCCCCEEEEeCCCCCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHHHHHHc--CCCcCcEEEEcC
Confidence 344555666677766 567889999999999999999998 4569999999999999999998765 224579999999
Q ss_pred CCCCCCCCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhccccccccccc
Q 018003 239 ISRLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVGFSIPV 318 (362)
Q Consensus 239 ~~~~p~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (362)
+..+|+++++||+|++..+++|+ ++..+++++.++|||||++++.++........... ...+. . . ...+
T Consensus 105 ~~~~~~~~~~fD~i~~~~~~~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~----~~~~~---~--~-~~~~ 173 (267)
T 3kkz_A 105 MDDLPFRNEELDLIWSEGAIYNI-GFERGLNEWRKYLKKGGYLAVSECSWFTDERPAEI----NDFWM---D--A-YPEI 173 (267)
T ss_dssp TTSCCCCTTCEEEEEESSCGGGT-CHHHHHHHHGGGEEEEEEEEEEEEEESSSCCCHHH----HHHHH---H--H-CTTC
T ss_pred hhhCCCCCCCEEEEEEcCCceec-CHHHHHHHHHHHcCCCCEEEEEEeeecCCCChHHH----HHHHH---H--h-CCCC
Confidence 99999888999999999999999 99999999999999999999998875332222211 11111 0 1 2356
Q ss_pred CCHHHHHHHHHHCCCEEEEEEEec
Q 018003 319 LGFDDLKRIFRQFQLVVNLKLFYG 342 (362)
Q Consensus 319 ~s~~~l~~ll~~~Gf~~v~~~~~g 342 (362)
.+..++.++++++||++++....+
T Consensus 174 ~~~~~~~~~l~~aGf~~v~~~~~~ 197 (267)
T 3kkz_A 174 DTIPNQVAKIHKAGYLPVATFILP 197 (267)
T ss_dssp EEHHHHHHHHHHTTEEEEEEEECC
T ss_pred CCHHHHHHHHHHCCCEEEEEEECC
Confidence 789999999999999998876654
No 14
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.88 E-value=5.8e-21 Score=171.71 Aligned_cols=169 Identities=13% Similarity=0.148 Sum_probs=134.1
Q ss_pred CCcHHHHHHHHhhc-CCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEec
Q 018003 160 PGPEKEFELMKGYL-KPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRAD 238 (362)
Q Consensus 160 ~~~~~~~~~l~~~l-~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d 238 (362)
+........+...+ ...++.+|||+|||+|.++..+++.++ .+++|+|+|+.+++.+++++... +...++.++++|
T Consensus 28 ~~~~~~~~~~l~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~~~~d 104 (257)
T 3f4k_A 28 PGSPEATRKAVSFINELTDDAKIADIGCGTGGQTLFLADYVK-GQITGIDLFPDFIEIFNENAVKA--NCADRVKGITGS 104 (257)
T ss_dssp SCCHHHHHHHHTTSCCCCTTCEEEEETCTTSHHHHHHHHHCC-SEEEEEESCHHHHHHHHHHHHHT--TCTTTEEEEECC
T ss_pred CCCHHHHHHHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHhCC-CeEEEEECCHHHHHHHHHHHHHc--CCCCceEEEECC
Confidence 44455566666666 445678999999999999999999975 49999999999999999998775 223459999999
Q ss_pred CCCCCCCCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhccccccccccc
Q 018003 239 ISRLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVGFSIPV 318 (362)
Q Consensus 239 ~~~~p~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (362)
+..+|+++++||+|++..+++|+ ++..+++++.++|||||++++.+++.............+... ...+
T Consensus 105 ~~~~~~~~~~fD~v~~~~~l~~~-~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~----------~~~~ 173 (257)
T 3f4k_A 105 MDNLPFQNEELDLIWSEGAIYNI-GFERGMNEWSKYLKKGGFIAVSEASWFTSERPAEIEDFWMDA----------YPEI 173 (257)
T ss_dssp TTSCSSCTTCEEEEEEESCSCCC-CHHHHHHHHHTTEEEEEEEEEEEEEESSSCCCHHHHHHHHHH----------CTTC
T ss_pred hhhCCCCCCCEEEEEecChHhhc-CHHHHHHHHHHHcCCCcEEEEEEeeccCCCChHHHHHHHHHh----------CCCC
Confidence 99999888999999999999999 899999999999999999999998643322221111111111 2346
Q ss_pred CCHHHHHHHHHHCCCEEEEEEEec
Q 018003 319 LGFDDLKRIFRQFQLVVNLKLFYG 342 (362)
Q Consensus 319 ~s~~~l~~ll~~~Gf~~v~~~~~g 342 (362)
.+..++.++++++||+++......
T Consensus 174 ~~~~~~~~~l~~aGf~~v~~~~~~ 197 (257)
T 3f4k_A 174 SVIPTCIDKMERAGYTPTAHFILP 197 (257)
T ss_dssp CBHHHHHHHHHHTTEEEEEEEECC
T ss_pred CCHHHHHHHHHHCCCeEEEEEECC
Confidence 789999999999999998866544
No 15
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.88 E-value=4.3e-21 Score=177.91 Aligned_cols=164 Identities=15% Similarity=0.097 Sum_probs=134.2
Q ss_pred HHHHHhhcC-CCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCC
Q 018003 166 FELMKGYLK-PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF 244 (362)
Q Consensus 166 ~~~l~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~ 244 (362)
.+.+.+.+. ..++.+|||+|||+|.++..+++.. ..+|+|+|+++.+++.|++++... +...++.++++|+..+|+
T Consensus 105 ~~~l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~~ 181 (312)
T 3vc1_A 105 AEFLMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRF-GSRVEGVTLSAAQADFGNRRAREL--RIDDHVRSRVCNMLDTPF 181 (312)
T ss_dssp HHHHHTTSCCCCTTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHT--TCTTTEEEEECCTTSCCC
T ss_pred HHHHHHHhccCCCCCEEEEecCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHc--CCCCceEEEECChhcCCC
Confidence 355677776 6678999999999999999999882 249999999999999999998775 223579999999999998
Q ss_pred CCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEccCCCC-cchhhhHHHHHhhhhcccccccccccCCHHH
Q 018003 245 ASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPF-NLIPFSRLLRQVCFLDLKIVGFSIPVLGFDD 323 (362)
Q Consensus 245 ~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 323 (362)
++++||+|++..+++|+ ++..+++++.++|||||++++.++...... ....+...+.... ...+++.++
T Consensus 182 ~~~~fD~V~~~~~l~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~s~~~ 251 (312)
T 3vc1_A 182 DKGAVTASWNNESTMYV-DLHDLFSEHSRFLKVGGRYVTITGCWNPRYGQPSKWVSQINAHF---------ECNIHSRRE 251 (312)
T ss_dssp CTTCEEEEEEESCGGGS-CHHHHHHHHHHHEEEEEEEEEEEEEECTTTCSCCHHHHHHHHHH---------TCCCCBHHH
T ss_pred CCCCEeEEEECCchhhC-CHHHHHHHHHHHcCCCcEEEEEEccccccccchhHHHHHHHhhh---------cCCCCCHHH
Confidence 88999999999999999 699999999999999999999998775432 2222222222221 235789999
Q ss_pred HHHHHHHCCCEEEEEEEec
Q 018003 324 LKRIFRQFQLVVNLKLFYG 342 (362)
Q Consensus 324 l~~ll~~~Gf~~v~~~~~g 342 (362)
+.++++++||++++...++
T Consensus 252 ~~~~l~~aGf~~~~~~~~~ 270 (312)
T 3vc1_A 252 YLRAMADNRLVPHTIVDLT 270 (312)
T ss_dssp HHHHHHTTTEEEEEEEECH
T ss_pred HHHHHHHCCCEEEEEEeCC
Confidence 9999999999998887765
No 16
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.88 E-value=8.8e-22 Score=178.51 Aligned_cols=179 Identities=22% Similarity=0.333 Sum_probs=128.4
Q ss_pred eeeCCCCCCCcccccCCCCccccccCCceecCccCcccccCCceeeeecCCCCCCcCCCCccchhcccCchhhHHHhhhh
Q 018003 71 VLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSGVGTHFDMTAASGSKDYGELMSPATEFFRMPFMSFIYERGW 150 (362)
Q Consensus 71 ~l~CP~C~~~l~~~~~~~~~~~~~~~~~l~C~~C~~~~~~~~g~~~~~~~~~~~~Y~~~~~~~~~~~~~~~~~~~~~~~~ 150 (362)
.+.||.|++.+.... ..++|++|+.++...+||++++........... ...+.+. .
T Consensus 2 ~~~Cp~C~~~~~~~~-----------~~~~C~~~~~~~~~~~Gy~~~~~~~~~~~~~~~--~~~~~~~-----------~ 57 (269)
T 1p91_A 2 SFSCPLCHQPLSREK-----------NSYICPQRHQFDMAKEGYVNLLPVQHKRSRDPG--DSAEMMQ-----------A 57 (269)
T ss_dssp CBBCTTTCCBCEEET-----------TEEECTTCCEEEBCTTSCEECSCSSSSCSCCCS--SSHHHHH-----------H
T ss_pred cccCCCCCccceeCC-----------CEEECCCCCcCCcCCCEEEEeecccccCCCCCC--CCHHHHH-----------H
Confidence 378999998876533 579999999998888999988765332111110 0000000 0
Q ss_pred hhhhccCCCCCc--HHHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCC
Q 018003 151 RQNFVWGGFPGP--EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFP 228 (362)
Q Consensus 151 ~~~~~~~~~~~~--~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~ 228 (362)
+..+...+++.+ ....+.+...+. .++.+|||+|||+|.++..+++..+..+++|+|+|+.+++.|+++
T Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~-------- 128 (269)
T 1p91_A 58 RRAFLDAGHYQPLRDAIVAQLRERLD-DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKR-------- 128 (269)
T ss_dssp HHHHHTTTTTHHHHHHHHHHHHHHSC-TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHH--------
T ss_pred HHHHHhCCCcHHHHHHHHHHHHHhcC-CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHh--------
Confidence 122222333222 122233333332 457899999999999999999985456999999999999999886
Q ss_pred CCCEEEEEecCCCCCCCCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEccC
Q 018003 229 KENFLLVRADISRLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVD 289 (362)
Q Consensus 229 ~~~~~~~~~d~~~~p~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~~~ 289 (362)
..++.+..+|+..+|+++++||+|++..+.. .++++.++|||||++++.++..+
T Consensus 129 ~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~~-------~l~~~~~~L~pgG~l~~~~~~~~ 182 (269)
T 1p91_A 129 YPQVTFCVASSHRLPFSDTSMDAIIRIYAPC-------KAEELARVVKPGGWVITATPGPR 182 (269)
T ss_dssp CTTSEEEECCTTSCSBCTTCEEEEEEESCCC-------CHHHHHHHEEEEEEEEEEEECTT
T ss_pred CCCcEEEEcchhhCCCCCCceeEEEEeCChh-------hHHHHHHhcCCCcEEEEEEcCHH
Confidence 3578899999999998889999999877632 48999999999999999998764
No 17
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.87 E-value=2.3e-21 Score=172.72 Aligned_cols=156 Identities=18% Similarity=0.252 Sum_probs=127.6
Q ss_pred HHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCC
Q 018003 165 EFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF 244 (362)
Q Consensus 165 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~ 244 (362)
..+.+...+. ++.+|||+|||+|.++..+++.+. +++|+|+++.+++.++++. ...++.++++|+..+++
T Consensus 43 ~~~~l~~~~~--~~~~vLDiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~------~~~~~~~~~~d~~~~~~ 112 (242)
T 3l8d_A 43 IIPFFEQYVK--KEAEVLDVGCGDGYGTYKLSRTGY--KAVGVDISEVMIQKGKERG------EGPDLSFIKGDLSSLPF 112 (242)
T ss_dssp HHHHHHHHSC--TTCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHTTT------CBTTEEEEECBTTBCSS
T ss_pred HHHHHHHHcC--CCCeEEEEcCCCCHHHHHHHHcCC--eEEEEECCHHHHHHHHhhc------ccCCceEEEcchhcCCC
Confidence 3456666665 478999999999999999999865 9999999999999999863 24689999999999998
Q ss_pred CCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhcccccccccccCCHHHH
Q 018003 245 ASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVGFSIPVLGFDDL 324 (362)
Q Consensus 245 ~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l 324 (362)
++++||+|++..+++|++++..+++++.++|||||++++.++.......... ..... .... +...++..++
T Consensus 113 ~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~----~~~~~----~~~~-~~~~~~~~~~ 183 (242)
T 3l8d_A 113 ENEQFEAIMAINSLEWTEEPLRALNEIKRVLKSDGYACIAILGPTAKPRENS----YPRLY----GKDV-VCNTMMPWEF 183 (242)
T ss_dssp CTTCEEEEEEESCTTSSSCHHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGG----GGGGG----TCCC-SSCCCCHHHH
T ss_pred CCCCccEEEEcChHhhccCHHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhh----hhhhc----cccc-cccCCCHHHH
Confidence 8999999999999999999999999999999999999999987643211111 11111 1222 5677999999
Q ss_pred HHHHHHCCCEEEEEE
Q 018003 325 KRIFRQFQLVVNLKL 339 (362)
Q Consensus 325 ~~ll~~~Gf~~v~~~ 339 (362)
.++++++||++++..
T Consensus 184 ~~~l~~~Gf~~~~~~ 198 (242)
T 3l8d_A 184 EQLVKEQGFKVVDGI 198 (242)
T ss_dssp HHHHHHTTEEEEEEE
T ss_pred HHHHHHcCCEEEEee
Confidence 999999999988765
No 18
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.87 E-value=1.8e-21 Score=173.65 Aligned_cols=150 Identities=12% Similarity=0.077 Sum_probs=119.1
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCCCCcceEEEecc
Q 018003 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAGA 256 (362)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~~~~fD~V~~~~ 256 (362)
++.+|||||||+|.++..+++.++ +++|+|+|+.+++.|++++. .++.++++|+..+ +++++||+|++.+
T Consensus 42 ~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~-------~~v~~~~~d~~~~-~~~~~fD~v~~~~ 111 (250)
T 2p7i_A 42 RPGNLLELGSFKGDFTSRLQEHFN--DITCVEASEEAISHAQGRLK-------DGITYIHSRFEDA-QLPRRYDNIVLTH 111 (250)
T ss_dssp CSSCEEEESCTTSHHHHHHTTTCS--CEEEEESCHHHHHHHHHHSC-------SCEEEEESCGGGC-CCSSCEEEEEEES
T ss_pred CCCcEEEECCCCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhhh-------CCeEEEEccHHHc-CcCCcccEEEEhh
Confidence 567999999999999999999887 89999999999999998731 1799999999887 4678999999999
Q ss_pred cccCCCCHHHHHHHHH-hhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhc-----c-cccccccccCCHHHHHHHHH
Q 018003 257 AIHCWSSPSTGVAEIS-RVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLD-----L-KIVGFSIPVLGFDDLKRIFR 329 (362)
Q Consensus 257 vl~h~~d~~~~l~~i~-r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~s~~~l~~ll~ 329 (362)
++||++|+..+|+++. ++|||||++++.+++..... .........+... . .... |..+++.+++.++|+
T Consensus 112 ~l~~~~~~~~~l~~~~~~~LkpgG~l~i~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~ 187 (250)
T 2p7i_A 112 VLEHIDDPVALLKRINDDWLAEGGRLFLVCPNANAVS---RQIAVKMGIISHNSAVTEAEFAHG-HRCTYALDTLERDAS 187 (250)
T ss_dssp CGGGCSSHHHHHHHHHHTTEEEEEEEEEEEECTTCHH---HHHHHHTTSSSSTTCCCHHHHHTT-CCCCCCHHHHHHHHH
T ss_pred HHHhhcCHHHHHHHHHHHhcCCCCEEEEEcCChHHHH---HHHHHHcCccccchhccccccccc-ccccCCHHHHHHHHH
Confidence 9999999999999999 99999999999998764311 1000000000000 0 0122 677899999999999
Q ss_pred HCCCEEEEEEE
Q 018003 330 QFQLVVNLKLF 340 (362)
Q Consensus 330 ~~Gf~~v~~~~ 340 (362)
++||++++...
T Consensus 188 ~~Gf~~~~~~~ 198 (250)
T 2p7i_A 188 RAGLQVTYRSG 198 (250)
T ss_dssp HTTCEEEEEEE
T ss_pred HCCCeEEEEee
Confidence 99999887753
No 19
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.87 E-value=2e-21 Score=177.26 Aligned_cols=162 Identities=20% Similarity=0.257 Sum_probs=126.3
Q ss_pred HHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCCCC
Q 018003 168 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASS 247 (362)
Q Consensus 168 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~~~ 247 (362)
.+.+.+...++.+|||||||+|.++..+++.+ .+|+|+|+|+.|++.++++ ..++.++++|+..+|+ ++
T Consensus 48 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~--------~~~~~~~~~d~~~~~~-~~ 116 (279)
T 3ccf_A 48 DLLQLLNPQPGEFILDLGCGTGQLTEKIAQSG--AEVLGTDNAATMIEKARQN--------YPHLHFDVADARNFRV-DK 116 (279)
T ss_dssp HHHHHHCCCTTCEEEEETCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHH--------CTTSCEEECCTTTCCC-SS
T ss_pred HHHHHhCCCCCCEEEEecCCCCHHHHHHHhCC--CeEEEEECCHHHHHHHHhh--------CCCCEEEECChhhCCc-CC
Confidence 45556666678899999999999999999844 5999999999999999986 3578899999999887 57
Q ss_pred cceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhh---hcccccccccccCCHHHH
Q 018003 248 SIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCF---LDLKIVGFSIPVLGFDDL 324 (362)
Q Consensus 248 ~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~s~~~l 324 (362)
+||+|++..+++|++|+..+++++.++|||||++++.++..... ..+...+..... ........+..+++.+++
T Consensus 117 ~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (279)
T 3ccf_A 117 PLDAVFSNAMLHWVKEPEAAIASIHQALKSGGRFVAEFGGKGNI---KYILEALYNALETLGIHNPQALNPWYFPSIGEY 193 (279)
T ss_dssp CEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECTTTT---HHHHHHHHHHHHHHTCCCGGGGCCCCCCCHHHH
T ss_pred CcCEEEEcchhhhCcCHHHHHHHHHHhcCCCcEEEEEecCCcch---HHHHHHHHHHHHhcCCccccCcCceeCCCHHHH
Confidence 89999999999999999999999999999999999998875432 122222111111 000111114567899999
Q ss_pred HHHHHHCCCEEEEEEEece
Q 018003 325 KRIFRQFQLVVNLKLFYGH 343 (362)
Q Consensus 325 ~~ll~~~Gf~~v~~~~~g~ 343 (362)
.++|+++||+++.......
T Consensus 194 ~~~l~~aGf~~~~~~~~~~ 212 (279)
T 3ccf_A 194 VNILEKQGFDVTYAALFNR 212 (279)
T ss_dssp HHHHHHHTEEEEEEEEEEC
T ss_pred HHHHHHcCCEEEEEEEecc
Confidence 9999999999887665543
No 20
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.86 E-value=4.3e-21 Score=174.51 Aligned_cols=170 Identities=18% Similarity=0.169 Sum_probs=131.0
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCCC
Q 018003 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 246 (362)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~~ 246 (362)
..+.......++.+|||||||+|.++..+++.++..+++|+|+++.+++.+++++... ...++.++.+|+..+++++
T Consensus 27 ~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~~~d~~~~~~~~ 103 (276)
T 3mgg_A 27 KLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKN---GIKNVKFLQANIFSLPFED 103 (276)
T ss_dssp HHHHTTCCCCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHT---TCCSEEEEECCGGGCCSCT
T ss_pred HHHhhcccCCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc---CCCCcEEEEcccccCCCCC
Confidence 3444444456788999999999999999999977789999999999999999988765 2357999999999999889
Q ss_pred CcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEccCCCC--cchhhhHHHHHhhhhcccccccccccCCHHHH
Q 018003 247 SSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPF--NLIPFSRLLRQVCFLDLKIVGFSIPVLGFDDL 324 (362)
Q Consensus 247 ~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l 324 (362)
++||+|++..+++|++++..+++++.++|||||++++.++...... +..+............ .... +...++..++
T Consensus 104 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~l 181 (276)
T 3mgg_A 104 SSFDHIFVCFVLEHLQSPEEALKSLKKVLKPGGTITVIEGDHGSCYFHPEGKKAIEAWNCLIRV-QAYM-KGNSLVGRQI 181 (276)
T ss_dssp TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECGGGCEEESCCHHHHHHHHHHHHH-HHHT-TCCTTGGGGH
T ss_pred CCeeEEEEechhhhcCCHHHHHHHHHHHcCCCcEEEEEEcCCCCceECCCcHHHHHHHHHHHHH-HHhc-CCCcchHHHH
Confidence 9999999999999999999999999999999999999987653221 1111111111111100 0011 3455677899
Q ss_pred HHHHHHCCCEEEEEEEe
Q 018003 325 KRIFRQFQLVVNLKLFY 341 (362)
Q Consensus 325 ~~ll~~~Gf~~v~~~~~ 341 (362)
..+|+++||++++....
T Consensus 182 ~~~l~~aGf~~v~~~~~ 198 (276)
T 3mgg_A 182 YPLLQESGFEKIRVEPR 198 (276)
T ss_dssp HHHHHHTTCEEEEEEEE
T ss_pred HHHHHHCCCCeEEEeeE
Confidence 99999999998877644
No 21
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.86 E-value=3.9e-21 Score=175.79 Aligned_cols=171 Identities=15% Similarity=0.101 Sum_probs=128.2
Q ss_pred HHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC-CCC
Q 018003 168 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-FAS 246 (362)
Q Consensus 168 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p-~~~ 246 (362)
.+...+... +.+|||||||+|.++..+++.+. +++|+|+|+.+++.|++++... +...++.++++|+..++ +.+
T Consensus 60 ~~l~~~~~~-~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~~~~~ 134 (285)
T 4htf_A 60 RVLAEMGPQ-KLRVLDAGGGEGQTAIKMAERGH--QVILCDLSAQMIDRAKQAAEAK--GVSDNMQFIHCAAQDVASHLE 134 (285)
T ss_dssp HHHHHTCSS-CCEEEEETCTTCHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHC---CCGGGEEEEESCGGGTGGGCS
T ss_pred HHHHhcCCC-CCEEEEeCCcchHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhc--CCCcceEEEEcCHHHhhhhcC
Confidence 344444443 67999999999999999999865 9999999999999999988765 12368999999999887 778
Q ss_pred CcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEccCCCCcchhh---hHHHHHhhhhcccccccccccCCHHH
Q 018003 247 SSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPF---SRLLRQVCFLDLKIVGFSIPVLGFDD 323 (362)
Q Consensus 247 ~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~s~~~ 323 (362)
++||+|++..+++|++++..+++++.++|||||++++.+++.......... ...+.............+..+++.++
T Consensus 135 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (285)
T 4htf_A 135 TPVDLILFHAVLEWVADPRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKKKKRTLSPDYPRDPTQ 214 (285)
T ss_dssp SCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEEBHHHHHHHHHHTTCHHHHHTTCCCC----CCCSCCBCHHH
T ss_pred CCceEEEECchhhcccCHHHHHHHHHHHcCCCeEEEEEEeCCchHHHHHHHhcCHHHHhhhccccccccCCCCCCCCHHH
Confidence 999999999999999999999999999999999999999875321000000 00111110000001111457789999
Q ss_pred HHHHHHHCCCEEEEEEEece
Q 018003 324 LKRIFRQFQLVVNLKLFYGH 343 (362)
Q Consensus 324 l~~ll~~~Gf~~v~~~~~g~ 343 (362)
+.++|+++||++++......
T Consensus 215 l~~~l~~aGf~v~~~~~~~~ 234 (285)
T 4htf_A 215 VYLWLEEAGWQIMGKTGVRV 234 (285)
T ss_dssp HHHHHHHTTCEEEEEEEESS
T ss_pred HHHHHHHCCCceeeeeeEEE
Confidence 99999999999988776543
No 22
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.86 E-value=3.2e-21 Score=167.30 Aligned_cols=141 Identities=11% Similarity=0.108 Sum_probs=121.3
Q ss_pred CCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCCCCcceEEEeccc
Q 018003 178 GGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAGAA 257 (362)
Q Consensus 178 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~~~~fD~V~~~~v 257 (362)
+.+|||+|||+|.++..+++.+. +++|+|+|+.+++.++++ ..++.++++|+..+++++++||+|++..+
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~--------~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 111 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGH--QIEGLEPATRLVELARQT--------HPSVTFHHGTITDLSDSPKRWAGLLAWYS 111 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTC--CEEEECCCHHHHHHHHHH--------CTTSEEECCCGGGGGGSCCCEEEEEEESS
T ss_pred CCeEEEecCCCCHHHHHHHhcCC--eEEEEeCCHHHHHHHHHh--------CCCCeEEeCcccccccCCCCeEEEEehhh
Confidence 67999999999999999999865 999999999999999987 46789999999999988899999999999
Q ss_pred ccCCC--CHHHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhcccccccccccCCHHHHHHHHHHCCCEE
Q 018003 258 IHCWS--SPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVGFSIPVLGFDDLKRIFRQFQLVV 335 (362)
Q Consensus 258 l~h~~--d~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~~Gf~~ 335 (362)
++|++ ++..+++++.++|||||.+++.++........ .....+..+++.+++.++|+++||++
T Consensus 112 l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~l~~~Gf~~ 176 (203)
T 3h2b_A 112 LIHMGPGELPDALVALRMAVEDGGGLLMSFFSGPSLEPM---------------YHPVATAYRWPLPELAQALETAGFQV 176 (203)
T ss_dssp STTCCTTTHHHHHHHHHHTEEEEEEEEEEEECCSSCEEE---------------CCSSSCEEECCHHHHHHHHHHTTEEE
T ss_pred HhcCCHHHHHHHHHHHHHHcCCCcEEEEEEccCCchhhh---------------hchhhhhccCCHHHHHHHHHHCCCcE
Confidence 99997 88999999999999999999999876531100 11111566789999999999999999
Q ss_pred EEEEEece
Q 018003 336 NLKLFYGH 343 (362)
Q Consensus 336 v~~~~~g~ 343 (362)
++......
T Consensus 177 ~~~~~~~~ 184 (203)
T 3h2b_A 177 TSSHWDPR 184 (203)
T ss_dssp EEEEECTT
T ss_pred EEEEecCC
Confidence 88877654
No 23
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.86 E-value=1.9e-20 Score=168.36 Aligned_cols=160 Identities=13% Similarity=0.016 Sum_probs=124.0
Q ss_pred HHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCC
Q 018003 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 245 (362)
Q Consensus 166 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~ 245 (362)
...+.+.+...++.+|||+|||+|.++..+++..+..+++|+|+|+.+++.++++ ..++.++++|+..++ +
T Consensus 22 ~~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~--------~~~~~~~~~d~~~~~-~ 92 (259)
T 2p35_A 22 ARDLLAQVPLERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADR--------LPNTNFGKADLATWK-P 92 (259)
T ss_dssp HHHHHTTCCCSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHH--------STTSEEEECCTTTCC-C
T ss_pred HHHHHHhcCCCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHh--------CCCcEEEECChhhcC-c
Confidence 3456666777778899999999999999999985556999999999999999986 357899999999988 7
Q ss_pred CCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHh--hhhcccc-cccccccCCHH
Q 018003 246 SSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQV--CFLDLKI-VGFSIPVLGFD 322 (362)
Q Consensus 246 ~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~s~~ 322 (362)
+++||+|++..+++|++|+..+++++.++|||||++++.++..... .....+..+... +...... ...+..+++.+
T Consensus 93 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (259)
T 2p35_A 93 AQKADLLYANAVFQWVPDHLAVLSQLMDQLESGGVLAVQMPDNLQE-PTHIAMHETADGGPWKDAFSGGGLRRKPLPPPS 171 (259)
T ss_dssp SSCEEEEEEESCGGGSTTHHHHHHHHGGGEEEEEEEEEEEECCTTS-HHHHHHHHHHHHSTTGGGC-------CCCCCHH
T ss_pred cCCcCEEEEeCchhhCCCHHHHHHHHHHhcCCCeEEEEEeCCCCCc-HHHHHHHHHhcCcchHHHhccccccccCCCCHH
Confidence 8899999999999999999999999999999999999999864221 111122222211 1100000 01156789999
Q ss_pred HHHHHHHHCCCEE
Q 018003 323 DLKRIFRQFQLVV 335 (362)
Q Consensus 323 ~l~~ll~~~Gf~~ 335 (362)
++.++|+++||++
T Consensus 172 ~~~~~l~~aGf~v 184 (259)
T 2p35_A 172 DYFNALSPKSSRV 184 (259)
T ss_dssp HHHHHHGGGEEEE
T ss_pred HHHHHHHhcCCce
Confidence 9999999999964
No 24
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.86 E-value=8.7e-21 Score=166.57 Aligned_cols=162 Identities=15% Similarity=0.161 Sum_probs=121.4
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCC---CCCEEEEEecCCCCC
Q 018003 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFP---KENFLLVRADISRLP 243 (362)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~---~~~~~~~~~d~~~~p 243 (362)
+.+.+.+...++.+|||+|||+|.++..+++.++..+++|+|+|+.+++.|++++... +.. ..++.++++|+...+
T Consensus 19 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~-~~~~~~~~~v~~~~~d~~~~~ 97 (219)
T 3jwg_A 19 GTVVAVLKSVNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKID-RLPEMQRKRISLFQSSLVYRD 97 (219)
T ss_dssp HHHHHHHHHTTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGG-GSCHHHHTTEEEEECCSSSCC
T ss_pred HHHHHHHhhcCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhh-ccccccCcceEEEeCcccccc
Confidence 4555555555678999999999999999999887679999999999999999987654 000 128999999998888
Q ss_pred CCCCcceEEEecccccCCCCH--HHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhcccccccccccCCH
Q 018003 244 FASSSIDAVHAGAAIHCWSSP--STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVGFSIPVLGF 321 (362)
Q Consensus 244 ~~~~~fD~V~~~~vl~h~~d~--~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 321 (362)
+.+++||+|++..+++|++++ ..+++++.++||||| +++.+++......+.. +.. .. +.... |...++.
T Consensus 98 ~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG-~~i~~~~~~~~~~~~~-~~~---~~---~~~~~-~~~~~~~ 168 (219)
T 3jwg_A 98 KRFSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQT-VIVSTPNKEYNFHYGN-LFE---GN---LRHRD-HRFEWTR 168 (219)
T ss_dssp GGGTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSE-EEEEEEBGGGGGCCCC-T-----------GGGC-CTTSBCH
T ss_pred cccCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCE-EEEEccchhhhhhhcc-cCc---cc---ccccC-ceeeecH
Confidence 878899999999999999877 699999999999999 4555555321101100 000 00 01122 6677899
Q ss_pred HHHH----HHHHHCCCEEEEE
Q 018003 322 DDLK----RIFRQFQLVVNLK 338 (362)
Q Consensus 322 ~~l~----~ll~~~Gf~~v~~ 338 (362)
++++ ++++++||++...
T Consensus 169 ~~l~~~~~~l~~~~Gf~v~~~ 189 (219)
T 3jwg_A 169 KEFQTWAVKVAEKYGYSVRFL 189 (219)
T ss_dssp HHHHHHHHHHHHHHTEEEEEE
T ss_pred HHHHHHHHHHHHHCCcEEEEE
Confidence 9999 8899999976543
No 25
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.85 E-value=1.5e-20 Score=164.80 Aligned_cols=161 Identities=17% Similarity=0.141 Sum_probs=120.3
Q ss_pred HHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCC----CCEEEEEecCCC
Q 018003 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPK----ENFLLVRADISR 241 (362)
Q Consensus 166 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~----~~~~~~~~d~~~ 241 (362)
.+.+.+.+...++.+|||+|||+|.++..+++.++..+++|+|+|+.+++.|++++... ... .++.++++|+..
T Consensus 18 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~--~~~~~~~~~v~~~~~d~~~ 95 (217)
T 3jwh_A 18 MNGVVAALKQSNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRL--RLPRNQWERLQLIQGALTY 95 (217)
T ss_dssp HHHHHHHHHHTTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTC--CCCHHHHTTEEEEECCTTS
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHh--cCCcccCcceEEEeCCccc
Confidence 34556666556678999999999999999999887679999999999999999987654 111 279999999988
Q ss_pred CCCCCCcceEEEecccccCCCCH--HHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhcccccccccccC
Q 018003 242 LPFASSSIDAVHAGAAIHCWSSP--STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVGFSIPVL 319 (362)
Q Consensus 242 ~p~~~~~fD~V~~~~vl~h~~d~--~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (362)
.+...++||+|++..+++|++++ ..+++++.++|||||++++ +++.. ....+..+... .+.... |...+
T Consensus 96 ~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~-~~~~~----~~~~~~~~~~~---~~~~~~-~~~~~ 166 (217)
T 3jwh_A 96 QDKRFHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVT-TPNIE----YNVKFANLPAG---KLRHKD-HRFEW 166 (217)
T ss_dssp CCGGGCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEE-EEBHH----HHHHTC---------------CCSCB
T ss_pred ccccCCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEE-ccCcc----cchhhcccccc---cccccc-ccccc
Confidence 88777899999999999999877 7999999999999995554 44321 11111000000 011222 66778
Q ss_pred CHHHHH----HHHHHCCCEEEE
Q 018003 320 GFDDLK----RIFRQFQLVVNL 337 (362)
Q Consensus 320 s~~~l~----~ll~~~Gf~~v~ 337 (362)
+.+++. ++++++||++..
T Consensus 167 ~~~~l~~~~~~~~~~~Gf~v~~ 188 (217)
T 3jwh_A 167 TRSQFQNWANKITERFAYNVQF 188 (217)
T ss_dssp CHHHHHHHHHHHHHHSSEEEEE
T ss_pred CHHHHHHHHHHHHHHcCceEEE
Confidence 999999 999999997754
No 26
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.85 E-value=3.6e-20 Score=162.02 Aligned_cols=165 Identities=14% Similarity=0.079 Sum_probs=120.6
Q ss_pred HHHHhhcC-CCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCC
Q 018003 167 ELMKGYLK-PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 245 (362)
Q Consensus 167 ~~l~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~ 245 (362)
..+.+.+. ..++.+|||+|||+|.++..+++.+. +++|+|+|+.+++.+++. ...++.++++|+..+ ++
T Consensus 35 ~~~~~~l~~~~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~~D~s~~~~~~a~~~-------~~~~~~~~~~d~~~~-~~ 104 (218)
T 3ou2_A 35 PAALERLRAGNIRGDVLELASGTGYWTRHLSGLAD--RVTALDGSAEMIAEAGRH-------GLDNVEFRQQDLFDW-TP 104 (218)
T ss_dssp HHHHHHHTTTTSCSEEEEESCTTSHHHHHHHHHSS--EEEEEESCHHHHHHHGGG-------CCTTEEEEECCTTSC-CC
T ss_pred HHHHHHHhcCCCCCeEEEECCCCCHHHHHHHhcCC--eEEEEeCCHHHHHHHHhc-------CCCCeEEEecccccC-CC
Confidence 34444444 44578999999999999999999865 999999999999999881 136899999999888 67
Q ss_pred CCcceEEEecccccCCCCH--HHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHH-HHHhhhhcccccc---cccccC
Q 018003 246 SSSIDAVHAGAAIHCWSSP--STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRL-LRQVCFLDLKIVG---FSIPVL 319 (362)
Q Consensus 246 ~~~fD~V~~~~vl~h~~d~--~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~ 319 (362)
+++||+|++..+++|++++ ..+++++.++|||||.+++.+++..... ....... ............. ....++
T Consensus 105 ~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (218)
T 3ou2_A 105 DRQWDAVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVTDHERR-LEQQDDSEPEVAVRRTLQDGRSFRIVKVFR 183 (218)
T ss_dssp SSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCCC-------------CEEEEECTTSCEEEEECCCC
T ss_pred CCceeEEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCCCccc-cchhhhcccccceeeecCCcchhhHhhcCC
Confidence 8899999999999999987 7999999999999999999998763221 1111100 0000000000000 024478
Q ss_pred CHHHHHHHHHHCCCEEEEEEEec
Q 018003 320 GFDDLKRIFRQFQLVVNLKLFYG 342 (362)
Q Consensus 320 s~~~l~~ll~~~Gf~~v~~~~~g 342 (362)
+.+++.++|+++||++......+
T Consensus 184 ~~~~~~~~l~~aGf~v~~~~~~~ 206 (218)
T 3ou2_A 184 SPAELTERLTALGWSCSVDEVHP 206 (218)
T ss_dssp CHHHHHHHHHHTTEEEEEEEEET
T ss_pred CHHHHHHHHHHCCCEEEeeeccc
Confidence 99999999999999965554444
No 27
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.85 E-value=7.2e-21 Score=169.62 Aligned_cols=154 Identities=15% Similarity=0.163 Sum_probs=124.0
Q ss_pred HHHHHHhhcC-CCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCC-
Q 018003 165 EFELMKGYLK-PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL- 242 (362)
Q Consensus 165 ~~~~l~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~- 242 (362)
....+...+. ..++.+|||||||+|.++..+++.+. +++|+|+|+.+++.+++ ++.++.+|+...
T Consensus 28 ~~~~~~~~l~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~-----------~~~~~~~d~~~~~ 94 (240)
T 3dli_A 28 VKARLRRYIPYFKGCRRVLDIGCGRGEFLELCKEEGI--ESIGVDINEDMIKFCEG-----------KFNVVKSDAIEYL 94 (240)
T ss_dssp HHHHHGGGGGGTTTCSCEEEETCTTTHHHHHHHHHTC--CEEEECSCHHHHHHHHT-----------TSEEECSCHHHHH
T ss_pred HHHHHHHHHhhhcCCCeEEEEeCCCCHHHHHHHhCCC--cEEEEECCHHHHHHHHh-----------hcceeeccHHHHh
Confidence 3445555544 24578999999999999999999865 89999999999999986 277888998775
Q ss_pred -CCCCCcceEEEecccccCCCCH--HHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhcccccccccccC
Q 018003 243 -PFASSSIDAVHAGAAIHCWSSP--STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVGFSIPVL 319 (362)
Q Consensus 243 -p~~~~~fD~V~~~~vl~h~~d~--~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (362)
|+++++||+|++..+++|++++ ..+++++.++|||||++++.+++.... . .....+ .... +..++
T Consensus 95 ~~~~~~~fD~i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~---~----~~~~~~----~~~~-~~~~~ 162 (240)
T 3dli_A 95 KSLPDKYLDGVMISHFVEHLDPERLFELLSLCYSKMKYSSYIVIESPNPTSL---Y----SLINFY----IDPT-HKKPV 162 (240)
T ss_dssp HTSCTTCBSEEEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEECTTSH---H----HHHHHT----TSTT-CCSCC
T ss_pred hhcCCCCeeEEEECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCCcchh---H----HHHHHh----cCcc-ccccC
Confidence 7788999999999999999966 899999999999999999999875421 1 111111 2223 77889
Q ss_pred CHHHHHHHHHHCCCEEEEEEEece
Q 018003 320 GFDDLKRIFRQFQLVVNLKLFYGH 343 (362)
Q Consensus 320 s~~~l~~ll~~~Gf~~v~~~~~g~ 343 (362)
+.+++.++++++||++++...++.
T Consensus 163 ~~~~l~~~l~~aGf~~~~~~~~~~ 186 (240)
T 3dli_A 163 HPETLKFILEYLGFRDVKIEFFEE 186 (240)
T ss_dssp CHHHHHHHHHHHTCEEEEEEEECC
T ss_pred CHHHHHHHHHHCCCeEEEEEEecc
Confidence 999999999999999988877653
No 28
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.85 E-value=1.2e-20 Score=169.27 Aligned_cols=169 Identities=14% Similarity=0.100 Sum_probs=126.7
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCCC
Q 018003 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 246 (362)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~~ 246 (362)
..+.+.+...++.+|||+|||+|.++..+++.++ .+++|+|+|+.+++.|+++.. ..++.++++|+..+++++
T Consensus 34 ~~l~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~------~~~~~~~~~d~~~~~~~~ 106 (253)
T 3g5l_A 34 HELKKMLPDFNQKTVLDLGCGFGWHCIYAAEHGA-KKVLGIDLSERMLTEAKRKTT------SPVVCYEQKAIEDIAIEP 106 (253)
T ss_dssp HHHHTTCCCCTTCEEEEETCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHHCC------CTTEEEEECCGGGCCCCT
T ss_pred HHHHHhhhccCCCEEEEECCCCCHHHHHHHHcCC-CEEEEEECCHHHHHHHHHhhc------cCCeEEEEcchhhCCCCC
Confidence 4566777766789999999999999999999875 389999999999999999754 358999999999999888
Q ss_pred CcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEccCCCCcc-hhh-------------hHHHHHhhh-hcccc
Q 018003 247 SSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNL-IPF-------------SRLLRQVCF-LDLKI 311 (362)
Q Consensus 247 ~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~-~~~-------------~~~~~~~~~-~~~~~ 311 (362)
++||+|++..+++|++++..+++++.++|||||.+++.++........ ..| ......... ..+..
T Consensus 107 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (253)
T 3g5l_A 107 DAYNVVLSSLALHYIASFDDICKKVYINLKSSGSFIFSVEHPVFTADGRQDWYTDETGNKLHWPVDRYFNESMRTSHFLG 186 (253)
T ss_dssp TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECHHHHSSSSCSCEECSSCCEEEEEECCTTCCCEEEEEETT
T ss_pred CCeEEEEEchhhhhhhhHHHHHHHHHHHcCCCcEEEEEeCCCccccCccccceeccCCceEEEEeccccccceEEEeecc
Confidence 999999999999999999999999999999999999987754210000 000 000000000 00000
Q ss_pred cccccccCCHHHHHHHHHHCCCEEEEEEEec
Q 018003 312 VGFSIPVLGFDDLKRIFRQFQLVVNLKLFYG 342 (362)
Q Consensus 312 ~~~~~~~~s~~~l~~ll~~~Gf~~v~~~~~g 342 (362)
........+.+++.++|+++||++++.....
T Consensus 187 ~~~~~~~~t~~~~~~~l~~aGF~~~~~~e~~ 217 (253)
T 3g5l_A 187 EDVQKYHRTVTTYIQTLLKNGFQINSVIEPE 217 (253)
T ss_dssp EEEEEECCCHHHHHHHHHHTTEEEEEEECCC
T ss_pred ccCccEecCHHHHHHHHHHcCCeeeeeecCC
Confidence 0112233499999999999999998876543
No 29
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.84 E-value=1.4e-20 Score=172.89 Aligned_cols=154 Identities=12% Similarity=0.023 Sum_probs=110.9
Q ss_pred CCCCeEEEEcCccchHHH----HHHHhCCCCEE--EEEeCCHHHHHHHHHHHhhcCCCCCCCEEE--EEecCCCCC----
Q 018003 176 VLGGNIIDASCGSGLFSR----IFAKSGLFSLV--VALDYSENMLKQCYEFVQQESNFPKENFLL--VRADISRLP---- 243 (362)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~----~l~~~~~~~~v--~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~--~~~d~~~~p---- 243 (362)
.++.+|||||||+|.++. .+...++...+ +|+|+|++|++.|+++++... ...++.+ ..++++.++
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~ 128 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTS--NLENVKFAWHKETSSEYQSRML 128 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCS--SCTTEEEEEECSCHHHHHHHHH
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhcc--CCCcceEEEEecchhhhhhhhc
Confidence 457799999999997654 34444555544 999999999999999876531 1234444 455554443
Q ss_pred --CCCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhcccccccccccCCH
Q 018003 244 --FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVGFSIPVLGF 321 (362)
Q Consensus 244 --~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 321 (362)
+++++||+|++.+++||++|+..+|++++++|||||++++..+..+. .+. .+............ +..+++.
T Consensus 129 ~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~-----~~~-~~~~~~~~~~~~~~-~~~~~~~ 201 (292)
T 2aot_A 129 EKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIVVSGSS-----GWD-KLWKKYGSRFPQDD-LCQYITS 201 (292)
T ss_dssp TTTCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEECTTS-----HHH-HHHHHHGGGSCCCT-TCCCCCH
T ss_pred cccCCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEEEecCCc-----cHH-HHHHHHHHhccCCC-cccCCCH
Confidence 45789999999999999999999999999999999999999776432 111 11111111111112 5678999
Q ss_pred HHHHHHHHHCCCEEEEE
Q 018003 322 DDLKRIFRQFQLVVNLK 338 (362)
Q Consensus 322 ~~l~~ll~~~Gf~~v~~ 338 (362)
+++.++|+++||+.+..
T Consensus 202 ~~~~~~l~~aGf~~~~~ 218 (292)
T 2aot_A 202 DDLTQMLDNLGLKYECY 218 (292)
T ss_dssp HHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHCCCceEEE
Confidence 99999999999987753
No 30
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.84 E-value=1.5e-20 Score=163.55 Aligned_cols=151 Identities=15% Similarity=0.091 Sum_probs=115.7
Q ss_pred HHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcC-----C----CCCCCEEEEEecC
Q 018003 169 MKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-----N----FPKENFLLVRADI 239 (362)
Q Consensus 169 l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~-----~----~~~~~~~~~~~d~ 239 (362)
+...+...++.+|||+|||+|..+..+++.|. +|+|+|+|+.|++.|+++.+... + ....++.++++|+
T Consensus 14 ~~~~l~~~~~~~vLD~GCG~G~~~~~la~~g~--~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~ 91 (203)
T 1pjz_A 14 YWSSLNVVPGARVLVPLCGKSQDMSWLSGQGY--HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDF 91 (203)
T ss_dssp HHHHHCCCTTCEEEETTTCCSHHHHHHHHHCC--EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECC
T ss_pred HHHhcccCCCCEEEEeCCCCcHhHHHHHHCCC--eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECcc
Confidence 33444555688999999999999999999876 99999999999999998764310 0 0135899999999
Q ss_pred CCCCCCC-CcceEEEecccccCCCCH--HHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhccccccccc
Q 018003 240 SRLPFAS-SSIDAVHAGAAIHCWSSP--STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVGFSI 316 (362)
Q Consensus 240 ~~~p~~~-~~fD~V~~~~vl~h~~d~--~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (362)
..+++.+ ++||+|++..+++|+++. ..+++++.++|||||++++.+...... ...+ ..
T Consensus 92 ~~l~~~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~------------------~~~~-~~ 152 (203)
T 1pjz_A 92 FALTARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITLEYDQA------------------LLEG-PP 152 (203)
T ss_dssp SSSTHHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEESSCSS------------------SSSS-CC
T ss_pred ccCCcccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEEecCcc------------------ccCC-CC
Confidence 9998765 789999999999999744 468999999999999966666543210 0001 22
Q ss_pred ccCCHHHHHHHHHHCCCEEEEEEEe
Q 018003 317 PVLGFDDLKRIFRQFQLVVNLKLFY 341 (362)
Q Consensus 317 ~~~s~~~l~~ll~~~Gf~~v~~~~~ 341 (362)
..++.+++.+++++ ||++......
T Consensus 153 ~~~~~~el~~~~~~-gf~i~~~~~~ 176 (203)
T 1pjz_A 153 FSVPQTWLHRVMSG-NWEVTKVGGQ 176 (203)
T ss_dssp CCCCHHHHHHTSCS-SEEEEEEEES
T ss_pred CCCCHHHHHHHhcC-CcEEEEeccc
Confidence 34789999999998 9987665543
No 31
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.84 E-value=7.5e-20 Score=168.72 Aligned_cols=169 Identities=12% Similarity=0.018 Sum_probs=129.4
Q ss_pred HHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCC
Q 018003 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 245 (362)
Q Consensus 166 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~ 245 (362)
++.+.+.+...++.+|||||||+|.++..+++..+ .+|+|+|+|+.+++.|++++... +...++.++.+|+..+
T Consensus 61 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~--- 134 (302)
T 3hem_A 61 RKLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEV--DSPRRKEVRIQGWEEF--- 134 (302)
T ss_dssp HHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHS--CCSSCEEEEECCGGGC---
T ss_pred HHHHHHHcCCCCcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhc--CCCCceEEEECCHHHc---
Confidence 45567777777899999999999999999998832 59999999999999999998775 2234799999999876
Q ss_pred CCcceEEEecccccCCCCH---------HHHHHHHHhhccCCcEEEEEEEccCCCCcchhh-------hHHHHHhhhhcc
Q 018003 246 SSSIDAVHAGAAIHCWSSP---------STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPF-------SRLLRQVCFLDL 309 (362)
Q Consensus 246 ~~~fD~V~~~~vl~h~~d~---------~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~-------~~~~~~~~~~~~ 309 (362)
+++||+|++..+++|++|| ..+++++.++|||||++++.++........... ......... .+
T Consensus 135 ~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 213 (302)
T 3hem_A 135 DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIPDKEEAQELGLTSPMSLLRFIKFIL-TE 213 (302)
T ss_dssp CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHH-HH
T ss_pred CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEeccCccchhhccccccccccchHHHHH-Hh
Confidence 6889999999999999887 699999999999999999998876432100000 000001111 11
Q ss_pred cccccccccCCHHHHHHHHHHCCCEEEEEEEece
Q 018003 310 KIVGFSIPVLGFDDLKRIFRQFQLVVNLKLFYGH 343 (362)
Q Consensus 310 ~~~~~~~~~~s~~~l~~ll~~~Gf~~v~~~~~g~ 343 (362)
.. + ...+.+.+++.++++++||++++....+.
T Consensus 214 ~~-p-~~~~~s~~~~~~~l~~aGf~~~~~~~~~~ 245 (302)
T 3hem_A 214 IF-P-GGRLPRISQVDYYSSNAGWKVERYHRIGA 245 (302)
T ss_dssp TC-T-TCCCCCHHHHHHHHHHHTCEEEEEEECGG
T ss_pred cC-C-CCCCCCHHHHHHHHHhCCcEEEEEEeCch
Confidence 11 2 34568899999999999999988876554
No 32
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.84 E-value=9.8e-20 Score=161.05 Aligned_cols=166 Identities=18% Similarity=0.231 Sum_probs=126.5
Q ss_pred HHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCC--CCCCCEEEEEecCCCCCCC
Q 018003 168 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESN--FPKENFLLVRADISRLPFA 245 (362)
Q Consensus 168 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~--~~~~~~~~~~~d~~~~p~~ 245 (362)
.+...+. ++.+|||+|||+|.++..+++.+. +++|+|+++.+++.+++++....- ....++.++.+|+..++++
T Consensus 23 ~~~~~~~--~~~~vLdiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 98 (235)
T 3sm3_A 23 IIHNYLQ--EDDEILDIGCGSGKISLELASKGY--SVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFH 98 (235)
T ss_dssp THHHHCC--TTCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSC
T ss_pred HHHHhCC--CCCeEEEECCCCCHHHHHHHhCCC--eEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCC
Confidence 3444444 478999999999999999999865 999999999999999998765410 0012689999999999988
Q ss_pred CCcceEEEecccccCCCCHH---HHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHH-HHHhhhh-----cccc-----
Q 018003 246 SSSIDAVHAGAAIHCWSSPS---TGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRL-LRQVCFL-----DLKI----- 311 (362)
Q Consensus 246 ~~~fD~V~~~~vl~h~~d~~---~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~-~~~~~~~-----~~~~----- 311 (362)
+++||+|++..+++|++++. .+++++.++|||||++++.++...... +.... ....+.. .+..
T Consensus 99 ~~~~D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (235)
T 3sm3_A 99 DSSFDFAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQNWHL---KLYRKRYLHDFPITKEEGSFLARDPET 175 (235)
T ss_dssp TTCEEEEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCTTS---HHHHHHHHHHHHHHCSTTEEEEECTTT
T ss_pred CCceeEEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcchhH---HHHHHHhhhhccchhhhcceEeccccc
Confidence 99999999999999999998 899999999999999999998764321 11111 1111100 0000
Q ss_pred --cccccccCCHHHHHHHHHHCCCEEEEEEE
Q 018003 312 --VGFSIPVLGFDDLKRIFRQFQLVVNLKLF 340 (362)
Q Consensus 312 --~~~~~~~~s~~~l~~ll~~~Gf~~v~~~~ 340 (362)
...+..+++.+++.++|+++||++++...
T Consensus 176 ~~~~~~~~~~~~~~l~~ll~~aGf~~~~~~~ 206 (235)
T 3sm3_A 176 GETEFIAHHFTEKELVFLLTDCRFEIDYFRV 206 (235)
T ss_dssp CCEEEEEECBCHHHHHHHHHTTTEEEEEEEE
T ss_pred CCcceeeEeCCHHHHHHHHHHcCCEEEEEEe
Confidence 01245689999999999999998877654
No 33
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.84 E-value=1e-19 Score=166.43 Aligned_cols=168 Identities=15% Similarity=0.103 Sum_probs=127.6
Q ss_pred HHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCC
Q 018003 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 245 (362)
Q Consensus 166 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~ 245 (362)
.+.+.+.+...++.+|||||||+|.++..+++.. +.+|+|+|+|+.+++.+++++... +...++.++.+|+..+|
T Consensus 53 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvd~s~~~~~~a~~~~~~~--~~~~~~~~~~~d~~~~~-- 127 (287)
T 1kpg_A 53 IDLALGKLGLQPGMTLLDVGCGWGATMMRAVEKY-DVNVVGLTLSKNQANHVQQLVANS--ENLRSKRVLLAGWEQFD-- 127 (287)
T ss_dssp HHHHHTTTTCCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHTC--CCCSCEEEEESCGGGCC--
T ss_pred HHHHHHHcCCCCcCEEEEECCcccHHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhc--CCCCCeEEEECChhhCC--
Confidence 4556667777788999999999999999998543 239999999999999999988764 22458999999998775
Q ss_pred CCcceEEEecccccCC--CCHHHHHHHHHhhccCCcEEEEEEEccCCCCcc----hh---hhHHHHHhhhhccccccccc
Q 018003 246 SSSIDAVHAGAAIHCW--SSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNL----IP---FSRLLRQVCFLDLKIVGFSI 316 (362)
Q Consensus 246 ~~~fD~V~~~~vl~h~--~d~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~----~~---~~~~~~~~~~~~~~~~~~~~ 316 (362)
++||+|++..+++|+ .++..+++++.++|||||++++.++........ .+ .......... . ...+ ..
T Consensus 128 -~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~-~~ 203 (287)
T 1kpg_A 128 -EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTITGLHPKEIHERGLPMSFTFARFLKFIV-T-EIFP-GG 203 (287)
T ss_dssp -CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEECCHHHHTTTTCSCHHHHHHHHHHHH-H-HTST-TC
T ss_pred -CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEecCCCccccccccccccccccchhhhHH-h-eeCC-CC
Confidence 789999999999999 678999999999999999999999876432110 00 0001111111 0 1112 34
Q ss_pred ccCCHHHHHHHHHHCCCEEEEEEEec
Q 018003 317 PVLGFDDLKRIFRQFQLVVNLKLFYG 342 (362)
Q Consensus 317 ~~~s~~~l~~ll~~~Gf~~v~~~~~g 342 (362)
.+.+.+++.++++++||++++....+
T Consensus 204 ~~~s~~~~~~~l~~aGf~~~~~~~~~ 229 (287)
T 1kpg_A 204 RLPSIPMVQECASANGFTVTRVQSLQ 229 (287)
T ss_dssp CCCCHHHHHHHHHTTTCEEEEEEECH
T ss_pred CCCCHHHHHHHHHhCCcEEEEEEeCc
Confidence 56799999999999999998877654
No 34
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.84 E-value=4.9e-20 Score=166.01 Aligned_cols=157 Identities=17% Similarity=0.202 Sum_probs=119.9
Q ss_pred CCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCCCCcceEEE
Q 018003 174 KPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVH 253 (362)
Q Consensus 174 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~~~~fD~V~ 253 (362)
...++.+|||+|||+|.++..+++.+. +++|+|+|+.+++.+++++... ..++.++++|+..+++++++||+|+
T Consensus 36 ~~~~~~~vLDiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~~~d~~~~~~~~~~fD~v~ 109 (263)
T 2yqz_A 36 PKGEEPVFLELGVGTGRIALPLIARGY--RYIALDADAAMLEVFRQKIAGV----DRKVQVVQADARAIPLPDESVHGVI 109 (263)
T ss_dssp CSSSCCEEEEETCTTSTTHHHHHTTTC--EEEEEESCHHHHHHHHHHTTTS----CTTEEEEESCTTSCCSCTTCEEEEE
T ss_pred CCCCCCEEEEeCCcCCHHHHHHHHCCC--EEEEEECCHHHHHHHHHHhhcc----CCceEEEEcccccCCCCCCCeeEEE
Confidence 345678999999999999999998864 9999999999999999987332 5789999999999998889999999
Q ss_pred ecccccCCCCHHHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhh-cccccccccccCCHHHHHHHHHHCC
Q 018003 254 AGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFL-DLKIVGFSIPVLGFDDLKRIFRQFQ 332 (362)
Q Consensus 254 ~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~l~~ll~~~G 332 (362)
+..+++|++|+..+++++.++|||||.+++.....+. .....+...+...... .+.... +..+++.+++.++|+++|
T Consensus 110 ~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~G 187 (263)
T 2yqz_A 110 VVHLWHLVPDWPKVLAEAIRVLKPGGALLEGWDQAEA-SPEWTLQERWRAFAAEEGFPVER-GLHAKRLKEVEEALRRLG 187 (263)
T ss_dssp EESCGGGCTTHHHHHHHHHHHEEEEEEEEEEEEEECC-CHHHHHHHHHHHHHHHHTCCCCC-CHHHHHHHHHHHHHHHTT
T ss_pred ECCchhhcCCHHHHHHHHHHHCCCCcEEEEEecCCCc-cHHHHHHHHHHHHHHHhCCCccc-ccccCCHHHHHHHHHHcC
Confidence 9999999999999999999999999999988332211 1100112212111110 001111 445788999999999999
Q ss_pred CEEEEE
Q 018003 333 LVVNLK 338 (362)
Q Consensus 333 f~~v~~ 338 (362)
|+++..
T Consensus 188 f~~~~~ 193 (263)
T 2yqz_A 188 LKPRTR 193 (263)
T ss_dssp CCCEEE
T ss_pred CCcceE
Confidence 986654
No 35
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.84 E-value=6.4e-20 Score=167.76 Aligned_cols=170 Identities=12% Similarity=0.079 Sum_probs=127.0
Q ss_pred HHHHhhc-CCCCCCeEEEEcCccchHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCC
Q 018003 167 ELMKGYL-KPVLGGNIIDASCGSGLFSRIFAKSGL-FSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF 244 (362)
Q Consensus 167 ~~l~~~l-~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~ 244 (362)
..+.+.+ ...++.+|||+|||+|.++..+++..+ ..+++|+|+|+.+++.|++++... ..++.++++|+..+++
T Consensus 11 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~----~~~v~~~~~d~~~~~~ 86 (284)
T 3gu3_A 11 SFLVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLL----PYDSEFLEGDATEIEL 86 (284)
T ss_dssp HHHHHTTSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSS----SSEEEEEESCTTTCCC
T ss_pred HHHHHHHhccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhc----CCceEEEEcchhhcCc
Confidence 3444333 455788999999999999999998865 369999999999999999998776 4489999999999887
Q ss_pred CCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEcc-----CCCC---cchhh--hHHHHHhhhhccccccc
Q 018003 245 ASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIV-----DGPF---NLIPF--SRLLRQVCFLDLKIVGF 314 (362)
Q Consensus 245 ~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~~-----~~~~---~~~~~--~~~~~~~~~~~~~~~~~ 314 (362)
+++||+|++..+++|++|+..+++++.++|||||++++.+++. .... ..... +..+...+.......
T Consensus 87 -~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 163 (284)
T 3gu3_A 87 -NDKYDIAICHAFLLHMTTPETMLQKMIHSVKKGGKIICFEPHWISNMASYLLDGEKQSEFIQLGVLQKLFESDTQRN-- 163 (284)
T ss_dssp -SSCEEEEEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEECCHHHHHHSEEETTSCHHHHCCHHHHHHHHHHHHHHT--
T ss_pred -CCCeeEEEECChhhcCCCHHHHHHHHHHHcCCCCEEEEEecchhcccccceecCcchhhccchHHHHHHHHHHhhhh--
Confidence 4689999999999999999999999999999999999998872 1000 00000 111111111000111
Q ss_pred ccccCCHHHHHHHHHHCCCEEEEEEEece
Q 018003 315 SIPVLGFDDLKRIFRQFQLVVNLKLFYGH 343 (362)
Q Consensus 315 ~~~~~s~~~l~~ll~~~Gf~~v~~~~~g~ 343 (362)
...+.+...+.++|+++||+.++......
T Consensus 164 ~~~~~~~~~l~~~l~~aGF~~v~~~~~~~ 192 (284)
T 3gu3_A 164 GKDGNIGMKIPIYLSELGVKNIECRVSDK 192 (284)
T ss_dssp CCCTTGGGTHHHHHHHTTCEEEEEEECCC
T ss_pred cccccHHHHHHHHHHHcCCCeEEEEEcCC
Confidence 23456677899999999999988765443
No 36
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.84 E-value=1.1e-20 Score=159.12 Aligned_cols=142 Identities=15% Similarity=0.168 Sum_probs=119.9
Q ss_pred HhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCCCCcc
Q 018003 170 KGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSI 249 (362)
Q Consensus 170 ~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~~~~f 249 (362)
.+.+...++.+|||+|||+|.++..+++.+. +++|+|+++.+++.++++ ..++.+..+| .++++++|
T Consensus 10 ~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~--------~~~v~~~~~d---~~~~~~~~ 76 (170)
T 3i9f_A 10 LPNIFEGKKGVIVDYGCGNGFYCKYLLEFAT--KLYCIDINVIALKEVKEK--------FDSVITLSDP---KEIPDNSV 76 (170)
T ss_dssp HHHHHSSCCEEEEEETCTTCTTHHHHHTTEE--EEEEECSCHHHHHHHHHH--------CTTSEEESSG---GGSCTTCE
T ss_pred HHhcCcCCCCeEEEECCCCCHHHHHHHhhcC--eEEEEeCCHHHHHHHHHh--------CCCcEEEeCC---CCCCCCce
Confidence 3344455678999999999999999999875 999999999999999987 3688999999 67778899
Q ss_pred eEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhcccccccccccCCHHHHHHHHH
Q 018003 250 DAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVGFSIPVLGFDDLKRIFR 329 (362)
Q Consensus 250 D~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~ 329 (362)
|+|++..+++|++++..+++++.++|||||++++.++....... ... +...++.++++++++
T Consensus 77 D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~-----------------~~~-~~~~~~~~~~~~~l~ 138 (170)
T 3i9f_A 77 DFILFANSFHDMDDKQHVISEVKRILKDDGRVIIIDWRKENTGI-----------------GPP-LSIRMDEKDYMGWFS 138 (170)
T ss_dssp EEEEEESCSTTCSCHHHHHHHHHHHEEEEEEEEEEEECSSCCSS-----------------SSC-GGGCCCHHHHHHHTT
T ss_pred EEEEEccchhcccCHHHHHHHHHHhcCCCCEEEEEEcCcccccc-----------------Cch-HhhhcCHHHHHHHHh
Confidence 99999999999999999999999999999999999887643211 111 456689999999998
Q ss_pred HCCCEEEEEEEecee
Q 018003 330 QFQLVVNLKLFYGHI 344 (362)
Q Consensus 330 ~~Gf~~v~~~~~g~~ 344 (362)
||++++....+..
T Consensus 139 --Gf~~~~~~~~~~~ 151 (170)
T 3i9f_A 139 --NFVVEKRFNPTPY 151 (170)
T ss_dssp --TEEEEEEECSSTT
T ss_pred --CcEEEEccCCCCc
Confidence 9999988877643
No 37
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.84 E-value=2.5e-20 Score=168.31 Aligned_cols=160 Identities=18% Similarity=0.130 Sum_probs=126.7
Q ss_pred HHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC
Q 018003 164 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP 243 (362)
Q Consensus 164 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p 243 (362)
...+.+.+.+...++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.++++ .++.++++|++.+|
T Consensus 21 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~---------~~~~~~~~d~~~~~ 89 (261)
T 3ege_A 21 RIVNAIINLLNLPKGSVIADIGAGTGGYSVALANQG--LFVYAVEPSIVMRQQAVVH---------PQVEWFTGYAENLA 89 (261)
T ss_dssp HHHHHHHHHHCCCTTCEEEEETCTTSHHHHHHHTTT--CEEEEECSCHHHHHSSCCC---------TTEEEECCCTTSCC
T ss_pred HHHHHHHHHhCCCCCCEEEEEcCcccHHHHHHHhCC--CEEEEEeCCHHHHHHHHhc---------cCCEEEECchhhCC
Confidence 345667777777778999999999999999999854 5999999999999988763 38999999999999
Q ss_pred CCCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhcccccccccccCCHHH
Q 018003 244 FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVGFSIPVLGFDD 323 (362)
Q Consensus 244 ~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 323 (362)
+++++||+|++..+++|++|+..+++++.++|| ||.+++.++...... ..+......... . ..+..+.+.++
T Consensus 90 ~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-gG~~~~~~~~~~~~~--~~~~~~~~~~~~----~-~~~~~~~~~~~ 161 (261)
T 3ege_A 90 LPDKSVDGVISILAIHHFSHLEKSFQEMQRIIR-DGTIVLLTFDIRLAQ--RIWLYDYFPFLW----E-DALRFLPLDEQ 161 (261)
T ss_dssp SCTTCBSEEEEESCGGGCSSHHHHHHHHHHHBC-SSCEEEEEECGGGCC--CCGGGGTCHHHH----H-HHHTSCCHHHH
T ss_pred CCCCCEeEEEEcchHhhccCHHHHHHHHHHHhC-CcEEEEEEcCCchhH--HHHHHHHHHHHh----h-hhhhhCCCHHH
Confidence 989999999999999999999999999999999 999999888754321 112211111110 0 11456778889
Q ss_pred HHHHHHHCCCEEEEEEEece
Q 018003 324 LKRIFRQFQLVVNLKLFYGH 343 (362)
Q Consensus 324 l~~ll~~~Gf~~v~~~~~g~ 343 (362)
+. +|+++||+.+.......
T Consensus 162 ~~-~l~~aGF~~v~~~~~~~ 180 (261)
T 3ege_A 162 IN-LLQENTKRRVEAIPFLL 180 (261)
T ss_dssp HH-HHHHHHCSEEEEEECCE
T ss_pred HH-HHHHcCCCceeEEEecC
Confidence 99 99999998887766543
No 38
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.84 E-value=2.6e-20 Score=167.01 Aligned_cols=155 Identities=13% Similarity=0.063 Sum_probs=124.9
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCCC
Q 018003 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 246 (362)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~~ 246 (362)
..+.+.+...++.+|||+|||+|.++..+++.+ ..+++|+|+|+.+++.+++++... .++.++++|+..+++++
T Consensus 83 ~~~l~~l~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~d~~~~~~~~ 156 (254)
T 1xtp_A 83 RNFIASLPGHGTSRALDCGAGIGRITKNLLTKL-YATTDLLEPVKHMLEEAKRELAGM-----PVGKFILASMETATLPP 156 (254)
T ss_dssp HHHHHTSTTCCCSEEEEETCTTTHHHHHTHHHH-CSEEEEEESCHHHHHHHHHHTTTS-----SEEEEEESCGGGCCCCS
T ss_pred HHHHHhhcccCCCEEEEECCCcCHHHHHHHHhh-cCEEEEEeCCHHHHHHHHHHhccC-----CceEEEEccHHHCCCCC
Confidence 445555666678899999999999999998886 358999999999999999986543 57999999999988888
Q ss_pred CcceEEEecccccCCC--CHHHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhcccccccccccCCHHHH
Q 018003 247 SSIDAVHAGAAIHCWS--SPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVGFSIPVLGFDDL 324 (362)
Q Consensus 247 ~~fD~V~~~~vl~h~~--d~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l 324 (362)
++||+|++..+++|++ ++..+++++.++|||||++++.++......... .... +..+++.+++
T Consensus 157 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~--------------~~~~-~~~~~~~~~~ 221 (254)
T 1xtp_A 157 NTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLV--------------DKED-SSLTRSDIHY 221 (254)
T ss_dssp SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEE--------------ETTT-TEEEBCHHHH
T ss_pred CCeEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCccccee--------------cccC-CcccCCHHHH
Confidence 9999999999999995 478999999999999999999987543211000 0111 4456799999
Q ss_pred HHHHHHCCCEEEEEEEec
Q 018003 325 KRIFRQFQLVVNLKLFYG 342 (362)
Q Consensus 325 ~~ll~~~Gf~~v~~~~~g 342 (362)
.++|+++||++++.....
T Consensus 222 ~~~l~~aGf~~~~~~~~~ 239 (254)
T 1xtp_A 222 KRLFNESGVRVVKEAFQE 239 (254)
T ss_dssp HHHHHHHTCCEEEEEECT
T ss_pred HHHHHHCCCEEEEeeecC
Confidence 999999999998876543
No 39
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.83 E-value=6e-20 Score=163.03 Aligned_cols=151 Identities=15% Similarity=0.153 Sum_probs=120.5
Q ss_pred HHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCC
Q 018003 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 245 (362)
Q Consensus 166 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~ 245 (362)
+..+....... +.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.|++++... ....++.++++|+..++ +
T Consensus 56 l~~~~~~~~~~-~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~-~ 129 (235)
T 3lcc_A 56 IVHLVDTSSLP-LGRALVPGCGGGHDVVAMASPER--FVVGLDISESALAKANETYGSS--PKAEYFSFVKEDVFTWR-P 129 (235)
T ss_dssp HHHHHHTTCSC-CEEEEEETCTTCHHHHHHCBTTE--EEEEECSCHHHHHHHHHHHTTS--GGGGGEEEECCCTTTCC-C
T ss_pred HHHHHHhcCCC-CCCEEEeCCCCCHHHHHHHhCCC--eEEEEECCHHHHHHHHHHhhcc--CCCcceEEEECchhcCC-C
Confidence 33444333333 45999999999999999987654 8999999999999999987652 11357999999999877 4
Q ss_pred CCcceEEEecccccCCC--CHHHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhcccccccccccCCHHH
Q 018003 246 SSSIDAVHAGAAIHCWS--SPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVGFSIPVLGFDD 323 (362)
Q Consensus 246 ~~~fD~V~~~~vl~h~~--d~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 323 (362)
+++||+|++..+++|++ ++..+++++.++|||||.+++.++..... ..+ +...++.++
T Consensus 130 ~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~-------------------~~~-~~~~~~~~~ 189 (235)
T 3lcc_A 130 TELFDLIFDYVFFCAIEPEMRPAWAKSMYELLKPDGELITLMYPITDH-------------------VGG-PPYKVDVST 189 (235)
T ss_dssp SSCEEEEEEESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEECCCSCC-------------------CSC-SSCCCCHHH
T ss_pred CCCeeEEEEChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEeccccc-------------------CCC-CCccCCHHH
Confidence 56899999999999998 88899999999999999999987754321 011 334588999
Q ss_pred HHHHHHHCCCEEEEEEEec
Q 018003 324 LKRIFRQFQLVVNLKLFYG 342 (362)
Q Consensus 324 l~~ll~~~Gf~~v~~~~~g 342 (362)
+.++++++||++++.....
T Consensus 190 ~~~~l~~~Gf~~~~~~~~~ 208 (235)
T 3lcc_A 190 FEEVLVPIGFKAVSVEENP 208 (235)
T ss_dssp HHHHHGGGTEEEEEEEECT
T ss_pred HHHHHHHcCCeEEEEEecC
Confidence 9999999999988776543
No 40
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.83 E-value=8.9e-20 Score=162.34 Aligned_cols=168 Identities=21% Similarity=0.221 Sum_probs=125.4
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCCC
Q 018003 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 246 (362)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~~ 246 (362)
..+...+...++.+|||+|||+|.++..+++.+. .+++|+|+|+.+++.++++... .++.++++|+..+++++
T Consensus 33 ~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~------~~~~~~~~d~~~~~~~~ 105 (243)
T 3bkw_A 33 PALRAMLPEVGGLRIVDLGCGFGWFCRWAHEHGA-SYVLGLDLSEKMLARARAAGPD------TGITYERADLDKLHLPQ 105 (243)
T ss_dssp HHHHHHSCCCTTCEEEEETCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHTSCS------SSEEEEECCGGGCCCCT
T ss_pred HHHHHhccccCCCEEEEEcCcCCHHHHHHHHCCC-CeEEEEcCCHHHHHHHHHhccc------CCceEEEcChhhccCCC
Confidence 4566667766788999999999999999998853 3899999999999999986432 37999999999888888
Q ss_pred CcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEccCCCCcch-hhhHH--------HHHhhh-----hccccc
Q 018003 247 SSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLI-PFSRL--------LRQVCF-----LDLKIV 312 (362)
Q Consensus 247 ~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~-~~~~~--------~~~~~~-----~~~~~~ 312 (362)
++||+|++..+++|++++..+++++.++|||||++++.+++........ .|... ...... ..+...
T Consensus 106 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (243)
T 3bkw_A 106 DSFDLAYSSLALHYVEDVARLFRTVHQALSPGGHFVFSTEHPIYMAPARPGWAIDAEGRRTWPIDRYLVEGPRKTDWLAK 185 (243)
T ss_dssp TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECHHHHCCSSCSCEECTTSCEEEEECCTTCCEEECTTHHHH
T ss_pred CCceEEEEeccccccchHHHHHHHHHHhcCcCcEEEEEeCCcccccCcCcceeecCCCceEEeecccccccceeeeeccC
Confidence 8999999999999999999999999999999999999987542100000 00000 000000 000000
Q ss_pred ccccccCCHHHHHHHHHHCCCEEEEEEEe
Q 018003 313 GFSIPVLGFDDLKRIFRQFQLVVNLKLFY 341 (362)
Q Consensus 313 ~~~~~~~s~~~l~~ll~~~Gf~~v~~~~~ 341 (362)
..+..+++.+++.++|+++||++++....
T Consensus 186 ~~~~~~~t~~~~~~~l~~aGF~~~~~~~~ 214 (243)
T 3bkw_A 186 GVVKHHRTVGTTLNALIRSGFAIEHVEEF 214 (243)
T ss_dssp SCCEEECCHHHHHHHHHHTTCEEEEEEEC
T ss_pred ceEEEeccHHHHHHHHHHcCCEeeeeccC
Confidence 11344579999999999999999887654
No 41
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.83 E-value=6.4e-20 Score=160.06 Aligned_cols=148 Identities=19% Similarity=0.167 Sum_probs=120.6
Q ss_pred HHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC
Q 018003 164 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP 243 (362)
Q Consensus 164 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p 243 (362)
..+..+...+. ++.+|||+|||+|.++..+++.+. +++|+|+|+.+++.+++++ ++.+..+|+..++
T Consensus 32 ~~~~~~~~~~~--~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~---------~~~~~~~d~~~~~ 98 (211)
T 3e23_A 32 ATLTKFLGELP--AGAKILELGCGAGYQAEAMLAAGF--DVDATDGSPELAAEASRRL---------GRPVRTMLFHQLD 98 (211)
T ss_dssp HHHHHHHTTSC--TTCEEEESSCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHH---------TSCCEECCGGGCC
T ss_pred HHHHHHHHhcC--CCCcEEEECCCCCHHHHHHHHcCC--eEEEECCCHHHHHHHHHhc---------CCceEEeeeccCC
Confidence 33444554444 478999999999999999999865 9999999999999999874 4567889998888
Q ss_pred CCCCcceEEEecccccCCC--CHHHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhcccccccccccCCH
Q 018003 244 FASSSIDAVHAGAAIHCWS--SPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVGFSIPVLGF 321 (362)
Q Consensus 244 ~~~~~fD~V~~~~vl~h~~--d~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 321 (362)
.+++||+|++..+++|++ ++..+++++.++|||||++++..+....... ...+.+..+++.
T Consensus 99 -~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~----------------~~~~~~~~~~~~ 161 (211)
T 3e23_A 99 -AIDAYDAVWAHACLLHVPRDELADVLKLIWRALKPGGLFYASYKSGEGEGR----------------DKLARYYNYPSE 161 (211)
T ss_dssp -CCSCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCSSCEE----------------CTTSCEECCCCH
T ss_pred -CCCcEEEEEecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEEcCCCcccc----------------cccchhccCCCH
Confidence 788999999999999998 7789999999999999999999876543210 011125678999
Q ss_pred HHHHHHHHHCC-CEEEEEEEe
Q 018003 322 DDLKRIFRQFQ-LVVNLKLFY 341 (362)
Q Consensus 322 ~~l~~ll~~~G-f~~v~~~~~ 341 (362)
+++.++++++| |++++....
T Consensus 162 ~~~~~~l~~aG~f~~~~~~~~ 182 (211)
T 3e23_A 162 EWLRARYAEAGTWASVAVESS 182 (211)
T ss_dssp HHHHHHHHHHCCCSEEEEEEE
T ss_pred HHHHHHHHhCCCcEEEEEEec
Confidence 99999999999 988776543
No 42
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.83 E-value=3.1e-20 Score=167.16 Aligned_cols=113 Identities=27% Similarity=0.341 Sum_probs=99.9
Q ss_pred HHHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCC
Q 018003 163 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL 242 (362)
Q Consensus 163 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~ 242 (362)
.+.++.|.+.... +.+|||||||+|.++..+++.+. +|+|+|+|+.|++.|++ ..++.++++|++++
T Consensus 27 ~~l~~~l~~~~~~--~~~vLDvGcGtG~~~~~l~~~~~--~v~gvD~s~~ml~~a~~---------~~~v~~~~~~~e~~ 93 (257)
T 4hg2_A 27 RALFRWLGEVAPA--RGDALDCGCGSGQASLGLAEFFE--RVHAVDPGEAQIRQALR---------HPRVTYAVAPAEDT 93 (257)
T ss_dssp HHHHHHHHHHSSC--SSEEEEESCTTTTTHHHHHTTCS--EEEEEESCHHHHHTCCC---------CTTEEEEECCTTCC
T ss_pred HHHHHHHHHhcCC--CCCEEEEcCCCCHHHHHHHHhCC--EEEEEeCcHHhhhhhhh---------cCCceeehhhhhhh
Confidence 4556677766654 57999999999999999999876 99999999999998865 47899999999999
Q ss_pred CCCCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEccC
Q 018003 243 PFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVD 289 (362)
Q Consensus 243 p~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~~~ 289 (362)
|+++++||+|++..++||+ ++..+++++.|+|||||+|++..+...
T Consensus 94 ~~~~~sfD~v~~~~~~h~~-~~~~~~~e~~rvLkpgG~l~~~~~~~~ 139 (257)
T 4hg2_A 94 GLPPASVDVAIAAQAMHWF-DLDRFWAELRRVARPGAVFAAVTYGLT 139 (257)
T ss_dssp CCCSSCEEEEEECSCCTTC-CHHHHHHHHHHHEEEEEEEEEEEECCC
T ss_pred cccCCcccEEEEeeehhHh-hHHHHHHHHHHHcCCCCEEEEEECCCC
Confidence 9999999999999999776 788999999999999999999888654
No 43
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.83 E-value=7e-20 Score=174.56 Aligned_cols=158 Identities=20% Similarity=0.221 Sum_probs=123.8
Q ss_pred CCCCCeEEEEcCccchHHHHHHHh-CCCCEEEEEeCCHHHHHHHHHHHhhcC----C-CCCCCEEEEEecCCCC------
Q 018003 175 PVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQES----N-FPKENFLLVRADISRL------ 242 (362)
Q Consensus 175 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~gvD~s~~~~~~a~~~~~~~~----~-~~~~~~~~~~~d~~~~------ 242 (362)
..++.+|||+|||+|.++..+++. ++..+|+|+|+|+.+++.|+++++... + ....++.++++|+..+
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~ 160 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPE 160 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSC
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccC
Confidence 346789999999999999999887 356799999999999999999765320 0 1136899999999987
Q ss_pred CCCCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhcccccccccccCCHH
Q 018003 243 PFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVGFSIPVLGFD 322 (362)
Q Consensus 243 p~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 322 (362)
++++++||+|+++.+++|++|+..+|+++.++|||||+|++.++..+... ..........+. .. ....++.+
T Consensus 161 ~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~--~~~~~~~~~~~~-----~~-~~~~~~~~ 232 (383)
T 4fsd_A 161 GVPDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSDVYADRRL--SEAAQQDPILYG-----EC-LGGALYLE 232 (383)
T ss_dssp CCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEESSCC--CHHHHHCHHHHH-----TT-CTTCCBHH
T ss_pred CCCCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEEecccccc--CHhHhhhHHHhh-----cc-cccCCCHH
Confidence 88889999999999999999999999999999999999999988765321 111111111111 11 34568889
Q ss_pred HHHHHHHHCCCEEEEEEE
Q 018003 323 DLKRIFRQFQLVVNLKLF 340 (362)
Q Consensus 323 ~l~~ll~~~Gf~~v~~~~ 340 (362)
++.++|+++||+.++...
T Consensus 233 ~~~~ll~~aGF~~v~~~~ 250 (383)
T 4fsd_A 233 DFRRLVAEAGFRDVRLVS 250 (383)
T ss_dssp HHHHHHHHTTCCCEEEEE
T ss_pred HHHHHHHHCCCceEEEEe
Confidence 999999999997765544
No 44
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.83 E-value=6.4e-20 Score=161.59 Aligned_cols=159 Identities=16% Similarity=0.179 Sum_probs=122.6
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCC--CCC
Q 018003 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR--LPF 244 (362)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~--~p~ 244 (362)
..+.+.+. .++.+|||+|||+|.++..+++.+ .+++|+|+++.+++.++++ ...++.+|+.. .++
T Consensus 23 ~~l~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~--~~~~~~D~~~~~~~~~~~~----------~~~~~~~d~~~~~~~~ 89 (230)
T 3cc8_A 23 PNLLKHIK-KEWKEVLDIGCSSGALGAAIKENG--TRVSGIEAFPEAAEQAKEK----------LDHVVLGDIETMDMPY 89 (230)
T ss_dssp HHHHTTCC-TTCSEEEEETCTTSHHHHHHHTTT--CEEEEEESSHHHHHHHHTT----------SSEEEESCTTTCCCCS
T ss_pred HHHHHHhc-cCCCcEEEeCCCCCHHHHHHHhcC--CeEEEEeCCHHHHHHHHHh----------CCcEEEcchhhcCCCC
Confidence 34555555 567899999999999999999884 5999999999999999874 23688999876 667
Q ss_pred CCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHH-Hhhhhc-c-cccccccccCCH
Q 018003 245 ASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLR-QVCFLD-L-KIVGFSIPVLGF 321 (362)
Q Consensus 245 ~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~-~~~~~~-~-~~~~~~~~~~s~ 321 (362)
++++||+|++..+++|++++..+++++.++|||||.+++.+++.... ..+.... ..+... . .....|..+++.
T Consensus 90 ~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (230)
T 3cc8_A 90 EEEQFDCVIFGDVLEHLFDPWAVIEKVKPYIKQNGVILASIPNVSHI----SVLAPLLAGNWTYTEYGLLDKTHIRFFTF 165 (230)
T ss_dssp CTTCEEEEEEESCGGGSSCHHHHHHHTGGGEEEEEEEEEEEECTTSH----HHHHHHHTTCCCCBSSSTTBTTCCCCCCH
T ss_pred CCCccCEEEECChhhhcCCHHHHHHHHHHHcCCCCEEEEEeCCcchH----HHHHHHhcCCceeccCCCCCcceEEEecH
Confidence 78899999999999999999999999999999999999999876421 1111111 111000 0 011226678999
Q ss_pred HHHHHHHHHCCCEEEEEEEec
Q 018003 322 DDLKRIFRQFQLVVNLKLFYG 342 (362)
Q Consensus 322 ~~l~~ll~~~Gf~~v~~~~~g 342 (362)
+++.++++++||++++.....
T Consensus 166 ~~~~~~l~~~Gf~~~~~~~~~ 186 (230)
T 3cc8_A 166 NEMLRMFLKAGYSISKVDRVY 186 (230)
T ss_dssp HHHHHHHHHTTEEEEEEEEEE
T ss_pred HHHHHHHHHcCCeEEEEEecc
Confidence 999999999999988776544
No 45
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.83 E-value=2.3e-19 Score=156.50 Aligned_cols=136 Identities=25% Similarity=0.308 Sum_probs=109.7
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCCCCcceEEEecc
Q 018003 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAGA 256 (362)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~~~~fD~V~~~~ 256 (362)
++.+|||+|||+|.++..+ + ..+++|+|+|+.+++.++++. .++.++++|+..+|+++++||+|++..
T Consensus 36 ~~~~vLdiG~G~G~~~~~l---~-~~~v~~vD~s~~~~~~a~~~~--------~~~~~~~~d~~~~~~~~~~fD~v~~~~ 103 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL---P-YPQKVGVEPSEAMLAVGRRRA--------PEATWVRAWGEALPFPGESFDVVLLFT 103 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC---C-CSEEEEECCCHHHHHHHHHHC--------TTSEEECCCTTSCCSCSSCEEEEEEES
T ss_pred CCCeEEEECCCCCHhHHhC---C-CCeEEEEeCCHHHHHHHHHhC--------CCcEEEEcccccCCCCCCcEEEEEEcC
Confidence 6789999999999999887 2 128999999999999999873 578899999999998889999999999
Q ss_pred cccCCCCHHHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhcccccccccccCCHHHHHHHHHHCC
Q 018003 257 AIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVGFSIPVLGFDDLKRIFRQFQ 332 (362)
Q Consensus 257 vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~~G 332 (362)
+++|++++..+++++.++|||||.+++.+++.... +................ |.++++.++++++|+ |
T Consensus 104 ~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~-----~~~~~~~~~~~~~~~~~-~~~~~s~~~l~~~l~--G 171 (211)
T 2gs9_A 104 TLEFVEDVERVLLEARRVLRPGGALVVGVLEALSP-----WAALYRRLGEKGVLPWA-QARFLAREDLKALLG--P 171 (211)
T ss_dssp CTTTCSCHHHHHHHHHHHEEEEEEEEEEEECTTSH-----HHHHHHHHHHTTCTTGG-GCCCCCHHHHHHHHC--S
T ss_pred hhhhcCCHHHHHHHHHHHcCCCCEEEEEecCCcCc-----HHHHHHHHhhccCcccc-ccccCCHHHHHHHhc--C
Confidence 99999999999999999999999999999986532 11111111010011112 678899999999998 7
No 46
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.83 E-value=6e-20 Score=169.66 Aligned_cols=173 Identities=14% Similarity=0.078 Sum_probs=128.3
Q ss_pred CCCCeEEEEcCccchHHHHHH-HhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCCCCcceEEEe
Q 018003 176 VLGGNIIDASCGSGLFSRIFA-KSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHA 254 (362)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~-~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~~~~fD~V~~ 254 (362)
.++.+|||||||+|.++..++ ...+..+++|+|+|+.+++.|++++... +...++.++++|+..++++ ++||+|++
T Consensus 117 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~~~-~~fD~v~~ 193 (305)
T 3ocj_A 117 RPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGH--ALAGQITLHRQDAWKLDTR-EGYDLLTS 193 (305)
T ss_dssp CTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTS--TTGGGEEEEECCGGGCCCC-SCEEEEEC
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhc--CCCCceEEEECchhcCCcc-CCeEEEEE
Confidence 458899999999999999885 4456679999999999999999998764 2234599999999999887 89999999
Q ss_pred cccccCCCCHHH---HHHHHHhhccCCcEEEEEEEccCCCCc-chhhh-----H---HHHHhhhhcccccccccccCCHH
Q 018003 255 GAAIHCWSSPST---GVAEISRVLRPGGVFVGTTYIVDGPFN-LIPFS-----R---LLRQVCFLDLKIVGFSIPVLGFD 322 (362)
Q Consensus 255 ~~vl~h~~d~~~---~l~~i~r~LkpgG~li~~~~~~~~~~~-~~~~~-----~---~~~~~~~~~~~~~~~~~~~~s~~ 322 (362)
+.+++|++++.. +++++.++|||||++++.++....... ...|. . ......... ........+++.+
T Consensus 194 ~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 272 (305)
T 3ocj_A 194 NGLNIYEPDDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTR-LIQPRWNALRTHA 272 (305)
T ss_dssp CSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHH-TTCCSCCCCCCHH
T ss_pred CChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHH-HHhhhhhccCCHH
Confidence 999999999986 799999999999999998866532111 11111 0 000111100 1111133668999
Q ss_pred HHHHHHHHCCCEEEEEEEe--ceeEEEEeeCc
Q 018003 323 DLKRIFRQFQLVVNLKLFY--GHIQHYIVKIP 352 (362)
Q Consensus 323 ~l~~ll~~~Gf~~v~~~~~--g~~~~~~~~kp 352 (362)
++.++|+++||++++.... +.....+++||
T Consensus 273 ~~~~~l~~aGF~~v~~~~~~~~~~~~v~a~Kp 304 (305)
T 3ocj_A 273 QTRAQLEEAGFTDLRFEDDRARLFPTVIARKP 304 (305)
T ss_dssp HHHHHHHHTTCEEEEEECCTTSSSCEEEEECC
T ss_pred HHHHHHHHCCCEEEEEEcccCceeeEEEEecC
Confidence 9999999999999887743 33355666665
No 47
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.83 E-value=2.3e-20 Score=168.52 Aligned_cols=166 Identities=16% Similarity=0.169 Sum_probs=122.0
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCCCCcceEEEecc
Q 018003 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAGA 256 (362)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~~~~fD~V~~~~ 256 (362)
++.+|||+|||+|.++..+++.+. +++|+|+|+.+++.|+++ ..++.++++|+..+++ +++||+|++..
T Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~--------~~~~~~~~~d~~~~~~-~~~fD~v~~~~ 118 (263)
T 3pfg_A 50 KAASLLDVACGTGMHLRHLADSFG--TVEGLELSADMLAIARRR--------NPDAVLHHGDMRDFSL-GRRFSAVTCMF 118 (263)
T ss_dssp TCCEEEEETCTTSHHHHHHTTTSS--EEEEEESCHHHHHHHHHH--------CTTSEEEECCTTTCCC-SCCEEEEEECT
T ss_pred CCCcEEEeCCcCCHHHHHHHHcCC--eEEEEECCHHHHHHHHhh--------CCCCEEEECChHHCCc-cCCcCEEEEcC
Confidence 368999999999999999999876 999999999999999987 3478999999999887 78999999998
Q ss_pred -cccCCC---CHHHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhH-----------HHHH--------hhhhcc----
Q 018003 257 -AIHCWS---SPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSR-----------LLRQ--------VCFLDL---- 309 (362)
Q Consensus 257 -vl~h~~---d~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~-----------~~~~--------~~~~~~---- 309 (362)
+++|++ ++..+++++.++|||||++++.++..........+.. .+.. .....+
T Consensus 119 ~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (263)
T 3pfg_A 119 SSIGHLAGQAELDAALERFAAHVLPDGVVVVEPWWFPENFTPGYVAAGTVEAGGTTVTRVSHSSREGEATRIEVHYLVAG 198 (263)
T ss_dssp TGGGGSCHHHHHHHHHHHHHHTEEEEEEEEECCCCCTTTCCTTEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEE
T ss_pred chhhhcCCHHHHHHHHHHHHHhcCCCcEEEEEeccChhhccccccccceeccCCceeEEEEEEEecCcEEEEEEEEEEec
Confidence 999996 4558899999999999999997543322110000000 0000 000000
Q ss_pred -------cccccccccCCHHHHHHHHHHCCCEEEEEEEe-ceeEEEEeeCcc
Q 018003 310 -------KIVGFSIPVLGFDDLKRIFRQFQLVVNLKLFY-GHIQHYIVKIPS 353 (362)
Q Consensus 310 -------~~~~~~~~~~s~~~l~~ll~~~Gf~~v~~~~~-g~~~~~~~~kp~ 353 (362)
.....+.++++.++++++|+++||++++.... +....++++||.
T Consensus 199 ~~~~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~~~~~~~~va~K~a 250 (263)
T 3pfg_A 199 PDRGITHHEESHRITLFTREQYERAFTAAGLSVEFMPGGPSGRGLFTGLPGA 250 (263)
T ss_dssp TTTEEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEESSTTTSSCEEEEEECC
T ss_pred CCCcEEEEEEEEEEEeecHHHHHHHHHHCCCEEEEeeCCCCCceeEEEecCC
Confidence 00011367899999999999999998876433 233677888874
No 48
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.83 E-value=1e-19 Score=161.98 Aligned_cols=168 Identities=15% Similarity=0.103 Sum_probs=123.4
Q ss_pred HHHHhhcCCC--CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCC
Q 018003 167 ELMKGYLKPV--LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF 244 (362)
Q Consensus 167 ~~l~~~l~~~--~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~ 244 (362)
+.+.+.+... ++.+|||+|||+|.++..+++.+. +++|+|+|+.+++.+++++... ..++.++++|+..+++
T Consensus 25 ~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~--~~~~~D~s~~~~~~a~~~~~~~----~~~~~~~~~d~~~~~~ 98 (246)
T 1y8c_A 25 DFIIEKCVENNLVFDDYLDLACGTGNLTENLCPKFK--NTWAVDLSQEMLSEAENKFRSQ----GLKPRLACQDISNLNI 98 (246)
T ss_dssp HHHHHHHHTTTCCTTEEEEETCTTSTTHHHHGGGSS--EEEEECSCHHHHHHHHHHHHHT----TCCCEEECCCGGGCCC
T ss_pred HHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHCCC--cEEEEECCHHHHHHHHHHHhhc----CCCeEEEecccccCCc
Confidence 4444444332 678999999999999999999875 9999999999999999988765 2379999999998887
Q ss_pred CCCcceEEEecc-cccCC---CCHHHHHHHHHhhccCCcEEEEEEEccCCCCcch---hhh---HHHHHhhhh-------
Q 018003 245 ASSSIDAVHAGA-AIHCW---SSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLI---PFS---RLLRQVCFL------- 307 (362)
Q Consensus 245 ~~~~fD~V~~~~-vl~h~---~d~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~---~~~---~~~~~~~~~------- 307 (362)
+ ++||+|++.. +++|+ .++..+++++.++|||||++++.+++........ .+. ......+..
T Consensus 99 ~-~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (246)
T 1y8c_A 99 N-RKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDINSYYKLSQVLGNNDFNYDDDEVFYYWENQFEDDLV 177 (246)
T ss_dssp S-CCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEEECHHHHHTTTTTCCEEEEETTEEEEEEEEEETTEE
T ss_pred c-CCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEEecCHHHHHhhcCcceEEecCCcEEEEEecccCCceE
Confidence 6 8899999998 99999 4667899999999999999999887642100000 000 000000000
Q ss_pred ------------cc--cccccccccCCHHHHHHHHHHCCCEEEEEEEe
Q 018003 308 ------------DL--KIVGFSIPVLGFDDLKRIFRQFQLVVNLKLFY 341 (362)
Q Consensus 308 ------------~~--~~~~~~~~~~s~~~l~~ll~~~Gf~~v~~~~~ 341 (362)
.+ .....+.++++.+++.++|+++||++++....
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aGf~~~~~~~~ 225 (246)
T 1y8c_A 178 SMYISFFVRDGEFYKRFDEEHEERAYKEEDIEKYLKHGQLNILDKVDC 225 (246)
T ss_dssp EEEEEEEEECSSSEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEEEES
T ss_pred EEEEEEEEecCCcccccEEEEEEEcCCHHHHHHHHHHCCCeEEEEEcc
Confidence 00 00012467899999999999999999887643
No 49
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.83 E-value=1.1e-19 Score=160.00 Aligned_cols=175 Identities=21% Similarity=0.292 Sum_probs=129.3
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCCC
Q 018003 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 246 (362)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~~ 246 (362)
+.+.+.+.. +.+|||+|||+|.++..+++.++ +++|+|+|+.+++.|++++... ..++.++++|+..+++++
T Consensus 30 ~~l~~~~~~--~~~vLDlG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~~~d~~~~~~~~ 101 (227)
T 1ve3_A 30 PLLMKYMKK--RGKVLDLACGVGGFSFLLEDYGF--EVVGVDISEDMIRKAREYAKSR----ESNVEFIVGDARKLSFED 101 (227)
T ss_dssp HHHHHSCCS--CCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT----TCCCEEEECCTTSCCSCT
T ss_pred HHHHHhcCC--CCeEEEEeccCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhc----CCCceEEECchhcCCCCC
Confidence 445555544 78999999999999999999887 9999999999999999988776 468999999999988888
Q ss_pred CcceEEEeccc--ccCCCCHHHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHH---HHHhhhhcc------------
Q 018003 247 SSIDAVHAGAA--IHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRL---LRQVCFLDL------------ 309 (362)
Q Consensus 247 ~~fD~V~~~~v--l~h~~d~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~---~~~~~~~~~------------ 309 (362)
++||+|++..+ ++|..++..+++++.++|||||++++.+++..... ...... ....+....
T Consensus 102 ~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (227)
T 1ve3_A 102 KTFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYFTDLRELL--PRLKESLVVGQKYWISKVIPDQEERTVVIE 179 (227)
T ss_dssp TCEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEEECHHHHG--GGCCC---------CCEEEEETTTTEEEEE
T ss_pred CcEEEEEEcCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEecChHHHH--HHHHhhhhcccceeecccccCccccEEEEE
Confidence 89999999999 56666788999999999999999999988642110 000000 000000000
Q ss_pred -----cccccccccCCHHHHHHHHHHCCCEEEEEEEeceeEEEEeeCc
Q 018003 310 -----KIVGFSIPVLGFDDLKRIFRQFQLVVNLKLFYGHIQHYIVKIP 352 (362)
Q Consensus 310 -----~~~~~~~~~~s~~~l~~ll~~~Gf~~v~~~~~g~~~~~~~~kp 352 (362)
.....+...|.. ++.++|+++||+.++....+.....+..+|
T Consensus 180 ~~~~~~~~~~~~~~w~~-~~~~~l~~~GF~~v~~~~~~~~~~~i~~~~ 226 (227)
T 1ve3_A 180 FKSEQDSFRVRFNVWGK-TGVELLAKLYFTKEAEEKVGNYSYLTVYNP 226 (227)
T ss_dssp C-----CCEEEEECCCH-HHHHHHHTTTEEEEEEEEETTTEEEEEEEE
T ss_pred eccchhhheeehhhhch-HHHHHHHHHhhhHHHHHHhCCceeEEeeCC
Confidence 000002334445 789999999999999988887766666655
No 50
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.82 E-value=4.6e-19 Score=166.98 Aligned_cols=178 Identities=12% Similarity=0.097 Sum_probs=137.3
Q ss_pred HHHhhcCCCC-CCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC-CC
Q 018003 168 LMKGYLKPVL-GGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-FA 245 (362)
Q Consensus 168 ~l~~~l~~~~-~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p-~~ 245 (362)
.+.+.+...+ +.+|||||||+|.++..+++..+..+++++|+ +.+++.+++++... ....++.++.+|+...+ +.
T Consensus 169 ~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~~~~ 245 (352)
T 3mcz_A 169 DVVSELGVFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAH--DLGGRVEFFEKNLLDARNFE 245 (352)
T ss_dssp HHHHTCGGGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHT--TCGGGEEEEECCTTCGGGGT
T ss_pred HHHHhCCCcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhc--CCCCceEEEeCCcccCcccC
Confidence 4555555555 78999999999999999999988889999999 88999999987764 22357999999998875 13
Q ss_pred CCcceEEEecccccCCCCH--HHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhcccccccccccCCHHH
Q 018003 246 SSSIDAVHAGAAIHCWSSP--STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVGFSIPVLGFDD 323 (362)
Q Consensus 246 ~~~fD~V~~~~vl~h~~d~--~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 323 (362)
.+.||+|++.+++||++++ ..+|++++++|||||++++.++..+... ..+....+...... .... +...++.++
T Consensus 246 ~~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~-~~~~~~~~~~~~~~--~~~~-~~~~~t~~e 321 (352)
T 3mcz_A 246 GGAADVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMTMNDDR-VTPALSADFSLHMM--VNTN-HGELHPTPW 321 (352)
T ss_dssp TCCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTS-SSSHHHHHHHHHHH--HHST-TCCCCCHHH
T ss_pred CCCccEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCC-CCCchHHHhhHHHH--hhCC-CCCcCCHHH
Confidence 4569999999999999877 7899999999999999999988765431 12222222222210 1111 345689999
Q ss_pred HHHHHHHCCCEEEEEEEeceeEEEEeeCcc
Q 018003 324 LKRIFRQFQLVVNLKLFYGHIQHYIVKIPS 353 (362)
Q Consensus 324 l~~ll~~~Gf~~v~~~~~g~~~~~~~~kp~ 353 (362)
|+++++++||++++. ..|....+.++||.
T Consensus 322 ~~~ll~~aGf~~~~~-~~g~~~l~~a~kp~ 350 (352)
T 3mcz_A 322 IAGVVRDAGLAVGER-SIGRYTLLIGQRSS 350 (352)
T ss_dssp HHHHHHHTTCEEEEE-EETTEEEEEEECCC
T ss_pred HHHHHHHCCCceeee-ccCceEEEEEecCC
Confidence 999999999999884 56778888888874
No 51
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.82 E-value=3.2e-19 Score=162.01 Aligned_cols=173 Identities=13% Similarity=0.071 Sum_probs=130.3
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHh-CCCCEEEEEeCCHH------HHHHHHHHHhhcCCCCCCCEEEEEec-
Q 018003 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSEN------MLKQCYEFVQQESNFPKENFLLVRAD- 238 (362)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~gvD~s~~------~~~~a~~~~~~~~~~~~~~~~~~~~d- 238 (362)
..+.+.+...++.+|||||||+|.++..+++. ++..+++|+|+|+. +++.|++++... +...++.++.+|
T Consensus 33 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~--~~~~~v~~~~~d~ 110 (275)
T 3bkx_A 33 LAIAEAWQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAG--PLGDRLTVHFNTN 110 (275)
T ss_dssp HHHHHHHTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTS--TTGGGEEEECSCC
T ss_pred HHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhc--CCCCceEEEECCh
Confidence 45666677778899999999999999999988 56679999999997 999999988764 122579999998
Q ss_pred --CCCCCCCCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEccCCCCcc--hhhhHHHHHhhhhc--cccc
Q 018003 239 --ISRLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNL--IPFSRLLRQVCFLD--LKIV 312 (362)
Q Consensus 239 --~~~~p~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~--~~~~~~~~~~~~~~--~~~~ 312 (362)
...+|+++++||+|++..+++|++++..+++.+.++++|||++++.++........ ......+....... ....
T Consensus 111 ~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (275)
T 3bkx_A 111 LSDDLGPIADQHFDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVAEWSMQPTALDQIGHLQAAMIQGLLYAIAPSDV 190 (275)
T ss_dssp TTTCCGGGTTCCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEEECSSCSSGGGHHHHHHHHHHHHHHHHSCCTT
T ss_pred hhhccCCCCCCCEEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEEecCCCCchhhhhHHHHHHHHHHHhhcccccc
Confidence 45667788999999999999999999998888888888899999999876533111 11111111111100 0111
Q ss_pred ccccccCCHHHHHHHHHHCCCEEEEEEEe
Q 018003 313 GFSIPVLGFDDLKRIFRQFQLVVNLKLFY 341 (362)
Q Consensus 313 ~~~~~~~s~~~l~~ll~~~Gf~~v~~~~~ 341 (362)
..+..+++.+++.++++++||++++....
T Consensus 191 ~~~~~~~s~~~l~~~l~~aGf~~~~~~~~ 219 (275)
T 3bkx_A 191 ANIRTLITPDTLAQIAHDNTWTYTAGTIV 219 (275)
T ss_dssp CSCCCCCCHHHHHHHHHHHTCEEEECCCB
T ss_pred ccccccCCHHHHHHHHHHCCCeeEEEEEe
Confidence 22456899999999999999998876544
No 52
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.82 E-value=1.2e-18 Score=164.59 Aligned_cols=179 Identities=14% Similarity=0.036 Sum_probs=135.6
Q ss_pred HHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCC
Q 018003 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 245 (362)
Q Consensus 166 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~ 245 (362)
...+.+.+...++.+|||||||+|.++..+++..+..+++++|+ +.+++.|+++++.. +...++.++.+|+...|++
T Consensus 179 ~~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~~~ 255 (359)
T 1x19_A 179 IQLLLEEAKLDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEK--GVADRMRGIAVDIYKESYP 255 (359)
T ss_dssp HHHHHHHCCCTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHT--TCTTTEEEEECCTTTSCCC
T ss_pred HHHHHHhcCCCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhc--CCCCCEEEEeCccccCCCC
Confidence 35566666666788999999999999999999988789999999 99999999988765 1234699999999888765
Q ss_pred CCcceEEEecccccCCCC--HHHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhcccccccccccCCHHH
Q 018003 246 SSSIDAVHAGAAIHCWSS--PSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVGFSIPVLGFDD 323 (362)
Q Consensus 246 ~~~fD~V~~~~vl~h~~d--~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 323 (362)
+. |+|++..++||+++ ...+|+++.++|||||++++.++..+.. ..+........+. ..........+++.++
T Consensus 256 ~~--D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~--~~~~~~~~~~~~~-~~~~g~~~~~~~t~~e 330 (359)
T 1x19_A 256 EA--DAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVIDDP--ENPNFDYLSHYIL-GAGMPFSVLGFKEQAR 330 (359)
T ss_dssp CC--SEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCCCT--TSCCHHHHHHHGG-GGGSSCCCCCCCCGGG
T ss_pred CC--CEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEecccCCC--CCchHHHHHHHHH-hcCCCCcccCCCCHHH
Confidence 43 99999999999988 6789999999999999999988776432 1122222221111 0000011234589999
Q ss_pred HHHHHHHCCCEEEEEEEeceeEEEEeeCc
Q 018003 324 LKRIFRQFQLVVNLKLFYGHIQHYIVKIP 352 (362)
Q Consensus 324 l~~ll~~~Gf~~v~~~~~g~~~~~~~~kp 352 (362)
|+++++++||++++....+....+.++||
T Consensus 331 ~~~ll~~aGf~~v~~~~~~~~~vi~a~kp 359 (359)
T 1x19_A 331 YKEILESLGYKDVTMVRKYDHLLVQAVKP 359 (359)
T ss_dssp HHHHHHHHTCEEEEEEEETTEEEEEEECC
T ss_pred HHHHHHHCCCceEEEEecCCceEEEEeCC
Confidence 99999999999998887774455666654
No 53
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.82 E-value=6.5e-19 Score=158.11 Aligned_cols=153 Identities=19% Similarity=0.191 Sum_probs=115.5
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhh---------cCC-----CCCCCE
Q 018003 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQ---------ESN-----FPKENF 232 (362)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~---------~~~-----~~~~~~ 232 (362)
+.+...+...++.+|||+|||+|..+..|++.|. +|+|+|+|+.|++.|+++... ..+ ....++
T Consensus 58 ~~~~~~~~~~~~~~vLD~GCG~G~~~~~La~~G~--~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 135 (252)
T 2gb4_A 58 KHLDTFLKGQSGLRVFFPLCGKAIEMKWFADRGH--TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSI 135 (252)
T ss_dssp HHHHHHHTTCCSCEEEETTCTTCTHHHHHHHTTC--EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSE
T ss_pred HHHHHhccCCCCCeEEEeCCCCcHHHHHHHHCCC--eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCce
Confidence 3333333334678999999999999999999986 999999999999999876531 000 013689
Q ss_pred EEEEecCCCCCCCC-CcceEEEecccccCCCC--HHHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhcc
Q 018003 233 LLVRADISRLPFAS-SSIDAVHAGAAIHCWSS--PSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDL 309 (362)
Q Consensus 233 ~~~~~d~~~~p~~~-~~fD~V~~~~vl~h~~d--~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (362)
.++++|+..+++.+ ++||+|++..+++|+++ ...+++++.++|||||++++.+......
T Consensus 136 ~~~~~D~~~l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~------------------ 197 (252)
T 2gb4_A 136 SLYCCSIFDLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVLSYDPT------------------ 197 (252)
T ss_dssp EEEESCTTTGGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEEECCTT------------------
T ss_pred EEEECccccCCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEEEecCCc------------------
Confidence 99999999998764 89999999999999974 3578999999999999998776553210
Q ss_pred cccccccccCCHHHHHHHHHHCCCEEEEEEEe
Q 018003 310 KIVGFSIPVLGFDDLKRIFRQFQLVVNLKLFY 341 (362)
Q Consensus 310 ~~~~~~~~~~s~~~l~~ll~~~Gf~~v~~~~~ 341 (362)
...+ ....++++++.++++. +|+++.....
T Consensus 198 ~~~g-~~~~~~~~el~~~l~~-~f~v~~~~~~ 227 (252)
T 2gb4_A 198 KHAG-PPFYVPSAELKRLFGT-KCSMQCLEEV 227 (252)
T ss_dssp SCCC-SSCCCCHHHHHHHHTT-TEEEEEEEEE
T ss_pred cCCC-CCCCCCHHHHHHHhhC-CeEEEEEecc
Confidence 0001 2233789999999987 5987766543
No 54
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.82 E-value=6.6e-19 Score=151.73 Aligned_cols=147 Identities=19% Similarity=0.201 Sum_probs=119.2
Q ss_pred HHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCCCC
Q 018003 168 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASS 247 (362)
Q Consensus 168 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~~~ 247 (362)
.+.+.+...++.+|||+|||+|.++..+++.+. +++|+|+|+.+++.+++++... ...++.++.+|+..+++ ++
T Consensus 23 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~~~d~~~~~~-~~ 96 (199)
T 2xvm_A 23 EVLEAVKVVKPGKTLDLGCGNGRNSLYLAANGY--DVDAWDKNAMSIANVERIKSIE---NLDNLHTRVVDLNNLTF-DR 96 (199)
T ss_dssp HHHHHTTTSCSCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHH---TCTTEEEEECCGGGCCC-CC
T ss_pred HHHHHhhccCCCeEEEEcCCCCHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHHhC---CCCCcEEEEcchhhCCC-CC
Confidence 455555656678999999999999999999864 9999999999999999988765 13479999999998887 78
Q ss_pred cceEEEecccccCCC--CHHHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhcccccccccccCCHHHHH
Q 018003 248 SIDAVHAGAAIHCWS--SPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVGFSIPVLGFDDLK 325 (362)
Q Consensus 248 ~fD~V~~~~vl~h~~--d~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~ 325 (362)
+||+|++..+++|++ ++..+++++.++|||||.+++.++........ ... +...++.++++
T Consensus 97 ~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~----------------~~~-~~~~~~~~~l~ 159 (199)
T 2xvm_A 97 QYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAAMDTADYPC----------------TVG-FPFAFKEGELR 159 (199)
T ss_dssp CEEEEEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCC----------------CSC-CSCCBCTTHHH
T ss_pred CceEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEeeccCCcCC----------------CCC-CCCccCHHHHH
Confidence 999999999999998 78899999999999999998877654321110 011 34567899999
Q ss_pred HHHHHCCCEEEEEE
Q 018003 326 RIFRQFQLVVNLKL 339 (362)
Q Consensus 326 ~ll~~~Gf~~v~~~ 339 (362)
+++++ |++++..
T Consensus 160 ~~~~~--f~~~~~~ 171 (199)
T 2xvm_A 160 RYYEG--WERVKYN 171 (199)
T ss_dssp HHTTT--SEEEEEE
T ss_pred HHhcC--CeEEEec
Confidence 99986 8776654
No 55
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.81 E-value=1.1e-19 Score=162.02 Aligned_cols=145 Identities=17% Similarity=0.141 Sum_probs=119.3
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCCCCcceEEEecc
Q 018003 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAGA 256 (362)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~~~~fD~V~~~~ 256 (362)
++.+|||+|||+|.++..+++.+ ..+++|+|+|+.+++.|++++... ...++.++.+|+..+++++++||+|++..
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 154 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL-FREVDMVDITEDFLVQAKTYLGEE---GKRVRNYFCCGLQDFTPEPDSYDVIWIQW 154 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT-CSEEEEEESCHHHHHHHHHHTGGG---GGGEEEEEECCGGGCCCCSSCEEEEEEES
T ss_pred CCCEEEEECCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHhhhc---CCceEEEEEcChhhcCCCCCCEEEEEEcc
Confidence 57899999999999999988876 459999999999999999987654 12468999999998888888999999999
Q ss_pred cccCCCCHH--HHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhcccccccccccCCHHHHHHHHHHCCCE
Q 018003 257 AIHCWSSPS--TGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVGFSIPVLGFDDLKRIFRQFQLV 334 (362)
Q Consensus 257 vl~h~~d~~--~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~~Gf~ 334 (362)
+++|++++. .+++++.++|||||++++.++..... ..+ .... +....+.+++.++++++||+
T Consensus 155 ~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~----~~~-----------~~~~-~~~~~~~~~~~~~l~~aGf~ 218 (241)
T 2ex4_A 155 VIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQEG----VIL-----------DDVD-SSVCRDLDVVRRIICSAGLS 218 (241)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEBSSS----EEE-----------ETTT-TEEEEBHHHHHHHHHHTTCC
T ss_pred hhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEccCCCc----cee-----------cccC-CcccCCHHHHHHHHHHcCCe
Confidence 999999865 89999999999999999998875420 000 1111 23345899999999999999
Q ss_pred EEEEEEe
Q 018003 335 VNLKLFY 341 (362)
Q Consensus 335 ~v~~~~~ 341 (362)
+++....
T Consensus 219 ~~~~~~~ 225 (241)
T 2ex4_A 219 LLAEERQ 225 (241)
T ss_dssp EEEEEEC
T ss_pred EEEeeec
Confidence 8887654
No 56
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.81 E-value=4.1e-19 Score=164.87 Aligned_cols=167 Identities=12% Similarity=0.110 Sum_probs=127.5
Q ss_pred HHHHHhhcCCCCCCeEEEEcCccchHHHHHHHh-CCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCC
Q 018003 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF 244 (362)
Q Consensus 166 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~ 244 (362)
.+.+.+.+...++.+|||||||+|.++..+++. +. +|+|+|+|+.+++.|++++... +...++.++.+|+..+|
T Consensus 79 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~--~v~gvD~s~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~- 153 (318)
T 2fk8_A 79 VDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERFDV--NVIGLTLSKNQHARCEQVLASI--DTNRSRQVLLQGWEDFA- 153 (318)
T ss_dssp HHHHHTTSCCCTTCEEEEESCTTSHHHHHHHHHHCC--EEEEEESCHHHHHHHHHHHHTS--CCSSCEEEEESCGGGCC-
T ss_pred HHHHHHhcCCCCcCEEEEEcccchHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhc--CCCCceEEEECChHHCC-
Confidence 456667777778899999999999999999987 54 9999999999999999988765 22357999999998775
Q ss_pred CCCcceEEEecccccCC--CCHHHHHHHHHhhccCCcEEEEEEEccCCCCcch----hhh---HHHHHhhhhcccccccc
Q 018003 245 ASSSIDAVHAGAAIHCW--SSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLI----PFS---RLLRQVCFLDLKIVGFS 315 (362)
Q Consensus 245 ~~~~fD~V~~~~vl~h~--~d~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~----~~~---~~~~~~~~~~~~~~~~~ 315 (362)
++||+|++..+++|+ +++..+++++.++|||||++++.++......... +.. ........ .... + .
T Consensus 154 --~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~-~ 228 (318)
T 2fk8_A 154 --EPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVSYHPYEMAARGKKLSFETARFIKFIV-TEIF-P-G 228 (318)
T ss_dssp --CCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHH-HHTS-T-T
T ss_pred --CCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEeccCCchhhhhccccccccccchhhHHH-HhcC-C-C
Confidence 789999999999999 5788999999999999999999998865321100 000 00001111 0011 1 2
Q ss_pred cccCCHHHHHHHHHHCCCEEEEEEEec
Q 018003 316 IPVLGFDDLKRIFRQFQLVVNLKLFYG 342 (362)
Q Consensus 316 ~~~~s~~~l~~ll~~~Gf~~v~~~~~g 342 (362)
..+.+.+++.++++++||++++....+
T Consensus 229 ~~~~s~~~~~~~l~~aGf~~~~~~~~~ 255 (318)
T 2fk8_A 229 GRLPSTEMMVEHGEKAGFTVPEPLSLR 255 (318)
T ss_dssp CCCCCHHHHHHHHHHTTCBCCCCEECH
T ss_pred CcCCCHHHHHHHHHhCCCEEEEEEecc
Confidence 456799999999999999988766544
No 57
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.81 E-value=1.4e-18 Score=162.46 Aligned_cols=160 Identities=13% Similarity=0.016 Sum_probs=124.6
Q ss_pred HhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCCCCcc
Q 018003 170 KGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSI 249 (362)
Q Consensus 170 ~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~~~~f 249 (362)
.+.+...+..+|||||||+|.++..+++..+..+++++|+ +.+++.|++++... +...++.+..+|+. .+++. +|
T Consensus 162 ~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~--~~~~~v~~~~~d~~-~~~p~-~~ 236 (332)
T 3i53_A 162 AAKYDWAALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDT--GLSGRAQVVVGSFF-DPLPA-GA 236 (332)
T ss_dssp GGSSCCGGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHT--TCTTTEEEEECCTT-SCCCC-SC
T ss_pred HHhCCCCCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhc--CcCcCeEEecCCCC-CCCCC-CC
Confidence 3334444568999999999999999999988889999999 99999999988765 22468999999996 44444 79
Q ss_pred eEEEecccccCCCCH--HHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhcccccccccccCCHHHHHHH
Q 018003 250 DAVHAGAAIHCWSSP--STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVGFSIPVLGFDDLKRI 327 (362)
Q Consensus 250 D~V~~~~vl~h~~d~--~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~l 327 (362)
|+|++.+++||++|+ ..+|++++++|||||++++.++..+.. ........... .. . ....++.++|+++
T Consensus 237 D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~-~~~~~~d~~~~------~~-~-~~~~~t~~e~~~l 307 (332)
T 3i53_A 237 GGYVLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDE-HAGTGMDLRML------TY-F-GGKERSLAELGEL 307 (332)
T ss_dssp SEEEEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC----CCHHHHHHHH------HH-H-SCCCCCHHHHHHH
T ss_pred cEEEEehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCCC-CccHHHHHHHH------hh-C-CCCCCCHHHHHHH
Confidence 999999999999987 789999999999999999998876532 11111111110 01 1 4566899999999
Q ss_pred HHHCCCEEEEEEEece
Q 018003 328 FRQFQLVVNLKLFYGH 343 (362)
Q Consensus 328 l~~~Gf~~v~~~~~g~ 343 (362)
++++||++++....+.
T Consensus 308 l~~aGf~~~~~~~~~~ 323 (332)
T 3i53_A 308 AAQAGLAVRAAHPISY 323 (332)
T ss_dssp HHHTTEEEEEEEECSS
T ss_pred HHHCCCEEEEEEECCC
Confidence 9999999998887665
No 58
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.81 E-value=7.4e-19 Score=161.79 Aligned_cols=172 Identities=17% Similarity=0.202 Sum_probs=125.3
Q ss_pred HHHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCC----CCEEEEEec
Q 018003 163 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPK----ENFLLVRAD 238 (362)
Q Consensus 163 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~----~~~~~~~~d 238 (362)
......+.+.+...+ .+|||||||+|.++..+++.+. +|+|+|+|+.+++.|++++... . .++.++++|
T Consensus 69 ~~~~~~~~~~~~~~~-~~vLDlGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~~~----~~~~~~~v~~~~~d 141 (299)
T 3g2m_A 69 TSEAREFATRTGPVS-GPVLELAAGMGRLTFPFLDLGW--EVTALELSTSVLAAFRKRLAEA----PADVRDRCTLVQGD 141 (299)
T ss_dssp HHHHHHHHHHHCCCC-SCEEEETCTTTTTHHHHHTTTC--CEEEEESCHHHHHHHHHHHHTS----CHHHHTTEEEEECB
T ss_pred cHHHHHHHHhhCCCC-CcEEEEeccCCHHHHHHHHcCC--eEEEEECCHHHHHHHHHHHhhc----ccccccceEEEeCc
Confidence 344456666666543 4999999999999999999865 8999999999999999998765 2 579999999
Q ss_pred CCCCCCCCCcceEEEec-ccccCCCC--HHHHHHHHHhhccCCcEEEEEEEccCCCC-----cchhhhHHHHHh--hhh-
Q 018003 239 ISRLPFASSSIDAVHAG-AAIHCWSS--PSTGVAEISRVLRPGGVFVGTTYIVDGPF-----NLIPFSRLLRQV--CFL- 307 (362)
Q Consensus 239 ~~~~p~~~~~fD~V~~~-~vl~h~~d--~~~~l~~i~r~LkpgG~li~~~~~~~~~~-----~~~~~~~~~~~~--~~~- 307 (362)
+..+++ +++||+|++. .+++|+++ ...+|+++.++|||||+|++.+++.+... ....+....... +..
T Consensus 142 ~~~~~~-~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 220 (299)
T 3g2m_A 142 MSAFAL-DKRFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAMSEAAESEPLERKQELPGRSGRRYVLHVR 220 (299)
T ss_dssp TTBCCC-SCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECCHHHHSCCCCC-------------CCEE
T ss_pred hhcCCc-CCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecCccccccchhccceeecCCCcEEEEEEE
Confidence 999887 6889999865 66676652 47899999999999999999998764210 000000000000 000
Q ss_pred --------------------cccccccccccCCHHHHHHHHHHCCCEEEEEEEec
Q 018003 308 --------------------DLKIVGFSIPVLGFDDLKRIFRQFQLVVNLKLFYG 342 (362)
Q Consensus 308 --------------------~~~~~~~~~~~~s~~~l~~ll~~~Gf~~v~~~~~g 342 (362)
.......+.++++.++++++|+++||++++...+.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~~ 275 (299)
T 3g2m_A 221 HLPAEEIQEITIHPADETTDPFVVCTHRRRLLAPDQVVRELVRSGFDVIAQTPFA 275 (299)
T ss_dssp EEEEEEEEEEEEEESCC--CCCCEEEEEEEEECHHHHHHHHHHTTCEEEEEEEEC
T ss_pred EeccccEEEEEEEeccCCCCcEEEEEEEEEEeCHHHHHHHHHHCCCEEEEEEecC
Confidence 00001125668899999999999999999887764
No 59
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.81 E-value=1.1e-18 Score=153.25 Aligned_cols=141 Identities=15% Similarity=0.162 Sum_probs=114.3
Q ss_pred CCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCCCCcceEEEeccc
Q 018003 178 GGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAGAA 257 (362)
Q Consensus 178 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~~~~fD~V~~~~v 257 (362)
+.+|||+|||+|.++..++.. +|+|+|+.+++.++++ ++.++++|+..+++++++||+|++..+
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~------~~vD~s~~~~~~a~~~----------~~~~~~~d~~~~~~~~~~fD~v~~~~~ 111 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK------IGVEPSERMAEIARKR----------GVFVLKGTAENLPLKDESFDFALMVTT 111 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC------EEEESCHHHHHHHHHT----------TCEEEECBTTBCCSCTTCEEEEEEESC
T ss_pred CCcEEEeCCCCCHHHHHHHHH------hccCCCHHHHHHHHhc----------CCEEEEcccccCCCCCCCeeEEEEcch
Confidence 779999999999999887653 9999999999999873 678999999999888889999999999
Q ss_pred ccCCCCHHHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhcccccccccccCCHHHHHHHHHHCCCEEEE
Q 018003 258 IHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVGFSIPVLGFDDLKRIFRQFQLVVNL 337 (362)
Q Consensus 258 l~h~~d~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~~Gf~~v~ 337 (362)
++|++++..+++++.++|||||.+++.+++.... ...+... ......... +..+++.+++.++|+++||++++
T Consensus 112 l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~--~~~~~~~----~~~~~~~~~-~~~~~~~~~l~~~l~~~Gf~~~~ 184 (219)
T 1vlm_A 112 ICFVDDPERALKEAYRILKKGGYLIVGIVDRESF--LGREYEK----NKEKSVFYK-NARFFSTEELMDLMRKAGFEEFK 184 (219)
T ss_dssp GGGSSCHHHHHHHHHHHEEEEEEEEEEEECSSSH--HHHHHHH----TTTC-CCST-TCCCCCHHHHHHHHHHTTCEEEE
T ss_pred HhhccCHHHHHHHHHHHcCCCcEEEEEEeCCccH--HHHHHHH----HhcCcchhc-ccccCCHHHHHHHHHHCCCeEEE
Confidence 9999999999999999999999999999875421 1111111 110111122 56789999999999999999887
Q ss_pred EEEe
Q 018003 338 KLFY 341 (362)
Q Consensus 338 ~~~~ 341 (362)
....
T Consensus 185 ~~~~ 188 (219)
T 1vlm_A 185 VVQT 188 (219)
T ss_dssp EEEE
T ss_pred Eecc
Confidence 6654
No 60
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.81 E-value=1.3e-19 Score=163.87 Aligned_cols=153 Identities=16% Similarity=0.251 Sum_probs=112.1
Q ss_pred CCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCC-------------------------
Q 018003 174 KPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFP------------------------- 228 (362)
Q Consensus 174 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~------------------------- 228 (362)
...++.+|||||||+|.++..++..+. .+|+|+|+|+.|++.|+++++...+..
T Consensus 52 ~~~~g~~vLDiGCG~G~~~~~~~~~~~-~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~ 130 (263)
T 2a14_A 52 GGLQGDTLIDIGSGPTIYQVLAACDSF-QDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEK 130 (263)
T ss_dssp TSCCEEEEEESSCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHH
T ss_pred CCCCCceEEEeCCCccHHHHHHHHhhh-cceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHH
Confidence 445678999999999988777666653 379999999999999998765431000
Q ss_pred -CCCEE-EEEecCCCC-CC---CCCcceEEEecccccCC----CCHHHHHHHHHhhccCCcEEEEEEEccCCCCcchhhh
Q 018003 229 -KENFL-LVRADISRL-PF---ASSSIDAVHAGAAIHCW----SSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFS 298 (362)
Q Consensus 229 -~~~~~-~~~~d~~~~-p~---~~~~fD~V~~~~vl~h~----~d~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~ 298 (362)
..++. ++++|+... |+ ..++||+|+++.+|||+ +++..++++++++|||||+|++++....... .
T Consensus 131 ~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~~-----~ 205 (263)
T 2a14_A 131 LRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPSY-----M 205 (263)
T ss_dssp HHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEE-----E
T ss_pred HHhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCccc-----e
Confidence 01233 889999873 43 25789999999999986 3446899999999999999999986543210 0
Q ss_pred HHHHHhhhhcccccccccccCCHHHHHHHHHHCCCEEEEEEEec
Q 018003 299 RLLRQVCFLDLKIVGFSIPVLGFDDLKRIFRQFQLVVNLKLFYG 342 (362)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~~Gf~~v~~~~~g 342 (362)
.. . .......++.+++.++|+++||++++.....
T Consensus 206 -------~g--~-~~~~~~~~~~~~l~~~l~~aGF~i~~~~~~~ 239 (263)
T 2a14_A 206 -------VG--K-REFSCVALEKGEVEQAVLDAGFDIEQLLHSP 239 (263)
T ss_dssp -------ET--T-EEEECCCCCHHHHHHHHHHTTEEEEEEEEEC
T ss_pred -------eC--C-eEeeccccCHHHHHHHHHHCCCEEEEEeecc
Confidence 00 0 0012346799999999999999988776653
No 61
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.81 E-value=3.2e-18 Score=162.32 Aligned_cols=163 Identities=10% Similarity=0.067 Sum_probs=129.3
Q ss_pred HHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCC
Q 018003 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 245 (362)
Q Consensus 166 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~ 245 (362)
...+.+.+...++.+|||||||+|.++..+++..+..+++++|+ +.+++.|++++... +...++.++.+|+. .+++
T Consensus 191 ~~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~--~l~~~v~~~~~d~~-~~~p 266 (369)
T 3gwz_A 191 AGQVAAAYDFSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGR--GLADRCEILPGDFF-ETIP 266 (369)
T ss_dssp HHHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHT--TCTTTEEEEECCTT-TCCC
T ss_pred HHHHHHhCCCccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhc--CcCCceEEeccCCC-CCCC
Confidence 34555666666678999999999999999999988889999999 99999999988765 22468999999997 4555
Q ss_pred CCcceEEEecccccCCCCHH--HHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhcccccccccccCCHHH
Q 018003 246 SSSIDAVHAGAAIHCWSSPS--TGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVGFSIPVLGFDD 323 (362)
Q Consensus 246 ~~~fD~V~~~~vl~h~~d~~--~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 323 (362)
. .||+|++.+++||++++. .+|++++++|||||++++.++..+.... +. ........ .... ....++.++
T Consensus 267 ~-~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~--~~-~~~~d~~~---~~~~-~g~~~t~~e 338 (369)
T 3gwz_A 267 D-GADVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDERPA--AS-TLFVDLLL---LVLV-GGAERSESE 338 (369)
T ss_dssp S-SCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCC--HH-HHHHHHHH---HHHH-SCCCBCHHH
T ss_pred C-CceEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCC--Cc-hhHhhHHH---Hhhc-CCccCCHHH
Confidence 5 799999999999999886 7999999999999999999987654311 11 11111111 0111 456789999
Q ss_pred HHHHHHHCCCEEEEEEE
Q 018003 324 LKRIFRQFQLVVNLKLF 340 (362)
Q Consensus 324 l~~ll~~~Gf~~v~~~~ 340 (362)
|+++|+++||++++...
T Consensus 339 ~~~ll~~aGf~~~~~~~ 355 (369)
T 3gwz_A 339 FAALLEKSGLRVERSLP 355 (369)
T ss_dssp HHHHHHTTTEEEEEEEE
T ss_pred HHHHHHHCCCeEEEEEE
Confidence 99999999999998877
No 62
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.80 E-value=1.1e-18 Score=160.53 Aligned_cols=172 Identities=16% Similarity=0.116 Sum_probs=125.2
Q ss_pred HHHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCC
Q 018003 163 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSG-LFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR 241 (362)
Q Consensus 163 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~ 241 (362)
....+.+..+.. .++.+|||+|||+|.++..+++.. +..+|+|+|+|+.+++.|+++++.. ++...++.++++|+..
T Consensus 23 ~~~~~~l~~~~~-~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~-~~~~~~v~~~~~d~~~ 100 (299)
T 3g5t_A 23 SDFYKMIDEYHD-GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGS-PDTYKNVSFKISSSDD 100 (299)
T ss_dssp HHHHHHHHHHCC-SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHC-C-CCTTEEEEECCTTC
T ss_pred HHHHHHHHHHhc-CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhc-cCCCCceEEEEcCHHh
Confidence 444566666544 468899999999999999999763 5679999999999999999987763 1235789999999999
Q ss_pred CCCCC------CcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhcccccccc
Q 018003 242 LPFAS------SSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVGFS 315 (362)
Q Consensus 242 ~p~~~------~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (362)
+++.+ ++||+|++..++||+ ++..+++++.++|||||.+++.++..... ...+.+..+...+...... .
T Consensus 101 ~~~~~~~~~~~~~fD~V~~~~~l~~~-~~~~~l~~~~~~LkpgG~l~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~---~ 175 (299)
T 3g5t_A 101 FKFLGADSVDKQKIDMITAVECAHWF-DFEKFQRSAYANLRKDGTIAIWGYADPIF-PDYPEFDDLMIEVPYGKQG---L 175 (299)
T ss_dssp CGGGCTTTTTSSCEEEEEEESCGGGS-CHHHHHHHHHHHEEEEEEEEEEEEEEEEC-TTCGGGTTHHHHHHHCTTT---T
T ss_pred CCccccccccCCCeeEEeHhhHHHHh-CHHHHHHHHHHhcCCCcEEEEEecCCccc-cCcHHHHHHHHHhccCccc---c
Confidence 98877 899999999999999 99999999999999999999854432111 0111122222222100001 1
Q ss_pred ccc---CCHHHHHHHHHHCCC-----EEEEEEEe
Q 018003 316 IPV---LGFDDLKRIFRQFQL-----VVNLKLFY 341 (362)
Q Consensus 316 ~~~---~s~~~l~~ll~~~Gf-----~~v~~~~~ 341 (362)
..+ ...+.+++.++++|| +.++...+
T Consensus 176 ~~~w~~p~~~~~~~~l~~~gfp~~~f~~v~~~~~ 209 (299)
T 3g5t_A 176 GPYWEQPGRSRLRNMLKDSHLDPELFHDIQVSYF 209 (299)
T ss_dssp GGGSCTTHHHHHHTTTTTCCCCTTTEEEEEEEEE
T ss_pred cchhhchhhHHHHHhhhccCCChHHcCcceEEEe
Confidence 222 345678999999999 66665554
No 63
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.80 E-value=1.3e-19 Score=160.82 Aligned_cols=172 Identities=17% Similarity=0.141 Sum_probs=122.0
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCCC
Q 018003 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 246 (362)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~~ 246 (362)
+.+...+ .++.+|||+|||+|.++..+++.++ +++|+|+|+.+++.|+++ ..++.++++|+..+++ +
T Consensus 32 ~~l~~~~--~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~~D~s~~~~~~a~~~--------~~~~~~~~~d~~~~~~-~ 98 (239)
T 3bxo_A 32 DLVRSRT--PEASSLLDVACGTGTHLEHFTKEFG--DTAGLELSEDMLTHARKR--------LPDATLHQGDMRDFRL-G 98 (239)
T ss_dssp HHHHHHC--TTCCEEEEETCTTSHHHHHHHHHHS--EEEEEESCHHHHHHHHHH--------CTTCEEEECCTTTCCC-S
T ss_pred HHHHHhc--CCCCeEEEecccCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHh--------CCCCEEEECCHHHccc-C
Confidence 3444444 4578999999999999999999876 999999999999999986 3578999999998887 6
Q ss_pred CcceEEEe-cccccCCCCH---HHHHHHHHhhccCCcEEEEEEEccCCCCcchh---h--------hHH-----------
Q 018003 247 SSIDAVHA-GAAIHCWSSP---STGVAEISRVLRPGGVFVGTTYIVDGPFNLIP---F--------SRL----------- 300 (362)
Q Consensus 247 ~~fD~V~~-~~vl~h~~d~---~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~---~--------~~~----------- 300 (362)
++||+|++ ..+++|++++ ..+++++.++|||||.+++.+++......... + +..
T Consensus 99 ~~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (239)
T 3bxo_A 99 RKFSAVVSMFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEPWWFPETFADGWVSADVVRRDGRTVARVSHSVREGNAT 178 (239)
T ss_dssp SCEEEEEECTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECCCCCTTTCCTTCEEEEEEEETTEEEEEEEEEEEETTEE
T ss_pred CCCcEEEEcCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEeccCcccccccceEeeEEecCCceEEEEEEEecCCCEE
Confidence 78999995 5599999654 68999999999999999998766532210000 0 000
Q ss_pred ------H-HH--hhhhcccccccccccCCHHHHHHHHHHCCCEEEEEEEe-ceeEEEEeeCc
Q 018003 301 ------L-RQ--VCFLDLKIVGFSIPVLGFDDLKRIFRQFQLVVNLKLFY-GHIQHYIVKIP 352 (362)
Q Consensus 301 ------~-~~--~~~~~~~~~~~~~~~~s~~~l~~ll~~~Gf~~v~~~~~-g~~~~~~~~kp 352 (362)
+ .. ..... .....+.++++.++++++|+++||++...... +....++++||
T Consensus 179 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~t~~~~~~ll~~aGF~v~~~~~~~~~~~~~va~K~ 239 (239)
T 3bxo_A 179 RMEVHFTVADPGKGVRH-FSDVHLITLFHQAEYEAAFTAAGLRVEYLEGGPSGRGLFVGVPA 239 (239)
T ss_dssp EEEEEEEEEETTTEEEE-EEEEEEEECCCHHHHHHHHHHTTEEEEEESSTTTSSCEEEEEEC
T ss_pred EEEEEEEEecCCCcceE-EEEEEEeeecCHHHHHHHHHHCCCEEEEeEcCCCCceEEEEecC
Confidence 0 00 00000 00111457899999999999999976554332 22355666554
No 64
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.80 E-value=1.5e-18 Score=162.11 Aligned_cols=169 Identities=12% Similarity=0.160 Sum_probs=129.6
Q ss_pred HHHHHhhcCC--CCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC
Q 018003 166 FELMKGYLKP--VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP 243 (362)
Q Consensus 166 ~~~l~~~l~~--~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p 243 (362)
...+.+.+.. .++.+|||+|||+|.++..+++..+..+++++|++ .+++.|++++... +...++.++.+|+...+
T Consensus 152 ~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~ 228 (335)
T 2r3s_A 152 AQLIAQLVNENKIEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQ--GVASRYHTIAGSAFEVD 228 (335)
T ss_dssp HHHHHHHHTC--CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHH--TCGGGEEEEESCTTTSC
T ss_pred HHHHHHhcccccCCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhc--CCCcceEEEecccccCC
Confidence 3455555555 66789999999999999999999777799999999 9999999987765 12346999999998877
Q ss_pred CCCCcceEEEecccccCCCCH--HHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhcccccccccccCCH
Q 018003 244 FASSSIDAVHAGAAIHCWSSP--STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVGFSIPVLGF 321 (362)
Q Consensus 244 ~~~~~fD~V~~~~vl~h~~d~--~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 321 (362)
++.+ ||+|++.+++||++++ ..+++++.++|||||++++.++...... ..+........... ...+ +...++.
T Consensus 229 ~~~~-~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~-~~~~~~~~~~~~~~--~~~~-~~~~~t~ 303 (335)
T 2r3s_A 229 YGND-YDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPNSDR-ITPPDAAAFSLVML--ATTP-NGDAYTF 303 (335)
T ss_dssp CCSC-EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCCTTS-SCSHHHHHHHHHHH--HHSS-SCCCCCH
T ss_pred CCCC-CcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCc-CCchHHHHHHHHHH--eeCC-CCCcCCH
Confidence 6654 9999999999999766 5899999999999999999988765321 12222222222210 1111 4567899
Q ss_pred HHHHHHHHHCCCEEEEEEEec
Q 018003 322 DDLKRIFRQFQLVVNLKLFYG 342 (362)
Q Consensus 322 ~~l~~ll~~~Gf~~v~~~~~g 342 (362)
++|.++++++||+.++....+
T Consensus 304 ~~~~~ll~~aGf~~~~~~~~~ 324 (335)
T 2r3s_A 304 AEYESMFSNAGFSHSQLHSLP 324 (335)
T ss_dssp HHHHHHHHHTTCSEEEEECCT
T ss_pred HHHHHHHHHCCCCeeeEEECC
Confidence 999999999999988876554
No 65
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.80 E-value=2.8e-19 Score=155.52 Aligned_cols=155 Identities=18% Similarity=0.257 Sum_probs=117.1
Q ss_pred CCCCeEEEEcCccchH-HHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCCCCcceEEEe
Q 018003 176 VLGGNIIDASCGSGLF-SRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHA 254 (362)
Q Consensus 176 ~~~~~vLDiGcG~G~~-~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~~~~fD~V~~ 254 (362)
.++.+|||+|||+|.+ ...+...+ .+++|+|+|+.+++.+++++... ..++.++++|+..+++++++||+|++
T Consensus 22 ~~~~~vLDiGcG~G~~~~~~~~~~~--~~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~~~d~~~~~~~~~~fD~v~~ 95 (209)
T 2p8j_A 22 NLDKTVLDCGAGGDLPPLSIFVEDG--YKTYGIEISDLQLKKAENFSREN----NFKLNISKGDIRKLPFKDESMSFVYS 95 (209)
T ss_dssp SSCSEEEEESCCSSSCTHHHHHHTT--CEEEEEECCHHHHHHHHHHHHHH----TCCCCEEECCTTSCCSCTTCEEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHhc----CCceEEEECchhhCCCCCCceeEEEE
Confidence 3478999999999997 45555544 49999999999999999988766 46789999999999988899999999
Q ss_pred cccccCC--CCHHHHHHHHHhhccCCcEEEEEEEccCCCCcch--hhhHHHHHhhhhcccccccccccCCHHHHHHHHHH
Q 018003 255 GAAIHCW--SSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLI--PFSRLLRQVCFLDLKIVGFSIPVLGFDDLKRIFRQ 330 (362)
Q Consensus 255 ~~vl~h~--~d~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~ 330 (362)
..+++|+ .++..+++++.++|||||++++.++......... ++......... ...+....+++.+++.++++.
T Consensus 96 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~e~~~~~~~ 172 (209)
T 2p8j_A 96 YGTIFHMRKNDVKEAIDEIKRVLKPGGLACINFLTTKDERYNKGEKIGEGEFLQLE---RGEKVIHSYVSLEEADKYFKD 172 (209)
T ss_dssp CSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEETTSTTTTCSEEEETTEEEECC----CCCEEEEEECHHHHHHTTTT
T ss_pred cChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEecccchhccchhhhccccceecc---CCCceeEEecCHHHHHHHHhh
Confidence 9999999 5778999999999999999999998764321100 00000000000 111113468899999999999
Q ss_pred CCCEEEEEE
Q 018003 331 FQLVVNLKL 339 (362)
Q Consensus 331 ~Gf~~v~~~ 339 (362)
+||...+..
T Consensus 173 ~g~~~~~~~ 181 (209)
T 2p8j_A 173 MKVLFKEDR 181 (209)
T ss_dssp SEEEEEEEE
T ss_pred cCceeeeee
Confidence 999766544
No 66
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.80 E-value=2.1e-19 Score=157.96 Aligned_cols=160 Identities=14% Similarity=0.102 Sum_probs=118.8
Q ss_pred HHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCC---CC
Q 018003 168 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL---PF 244 (362)
Q Consensus 168 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~---p~ 244 (362)
.+.+.+...++.+|||+|||+|.++..+++.+. +++|+|+|+.+++.++++ .++.+..+|+..+ ++
T Consensus 43 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~---------~~~~~~~~~~~~~~~~~~ 111 (227)
T 3e8s_A 43 AILLAILGRQPERVLDLGCGEGWLLRALADRGI--EAVGVDGDRTLVDAARAA---------GAGEVHLASYAQLAEAKV 111 (227)
T ss_dssp HHHHHHHHTCCSEEEEETCTTCHHHHHHHTTTC--EEEEEESCHHHHHHHHHT---------CSSCEEECCHHHHHTTCS
T ss_pred HHHHHhhcCCCCEEEEeCCCCCHHHHHHHHCCC--EEEEEcCCHHHHHHHHHh---------cccccchhhHHhhccccc
Confidence 445555545578999999999999999999865 999999999999999984 4667888887665 54
Q ss_pred CC-CcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhcc--cccccccccCCH
Q 018003 245 AS-SSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDL--KIVGFSIPVLGF 321 (362)
Q Consensus 245 ~~-~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~s~ 321 (362)
.. ++||+|++..+++ ..++..+++++.++|||||++++.+++....... .+...+....+..+ .....+..+++.
T Consensus 112 ~~~~~fD~v~~~~~l~-~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (227)
T 3e8s_A 112 PVGKDYDLICANFALL-HQDIIELLSAMRTLLVPGGALVIQTLHPWSVADG-DYQDGWREESFAGFAGDWQPMPWYFRTL 189 (227)
T ss_dssp CCCCCEEEEEEESCCC-SSCCHHHHHHHHHTEEEEEEEEEEECCTTTTCTT-CCSCEEEEECCTTSSSCCCCEEEEECCH
T ss_pred ccCCCccEEEECchhh-hhhHHHHHHHHHHHhCCCeEEEEEecCccccCcc-ccccccchhhhhccccCcccceEEEecH
Confidence 44 4599999999999 7899999999999999999999999876432111 11111000000000 011225567899
Q ss_pred HHHHHHHHHCCCEEEEEEE
Q 018003 322 DDLKRIFRQFQLVVNLKLF 340 (362)
Q Consensus 322 ~~l~~ll~~~Gf~~v~~~~ 340 (362)
+++.++|+++||++++...
T Consensus 190 ~~~~~~l~~aGf~~~~~~~ 208 (227)
T 3e8s_A 190 ASWLNALDMAGLRLVSLQE 208 (227)
T ss_dssp HHHHHHHHHTTEEEEEEEC
T ss_pred HHHHHHHHHcCCeEEEEec
Confidence 9999999999999987665
No 67
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.80 E-value=1.2e-18 Score=164.90 Aligned_cols=170 Identities=14% Similarity=0.073 Sum_probs=125.8
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCC--CCCCCcceEEEe
Q 018003 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL--PFASSSIDAVHA 254 (362)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~--p~~~~~fD~V~~ 254 (362)
...+|||||||+|.++..+++..+..+++++|+ +.+++.|++++... +...++.++.+|+... |++ ++||+|++
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~~~~p-~~~D~v~~ 254 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGL--SGSERIHGHGANLLDRDVPFP-TGFDAVWM 254 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTC--TTGGGEEEEECCCCSSSCCCC-CCCSEEEE
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhc--CcccceEEEEccccccCCCCC-CCcCEEEE
Confidence 467999999999999999999988889999999 99999999988764 1235899999999875 465 78999999
Q ss_pred cccccCCCCHH--HHHHHHHhhccCCcEEEEEEEccCCCCcchhhh-HHHHHhhhhcccccccccccCCHHHHHHHHHHC
Q 018003 255 GAAIHCWSSPS--TGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFS-RLLRQVCFLDLKIVGFSIPVLGFDDLKRIFRQF 331 (362)
Q Consensus 255 ~~vl~h~~d~~--~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~~ 331 (362)
..++||++++. .+|++++++|||||++++.++..+......... ........ .....+ ....++.++|+++|+++
T Consensus 255 ~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~t~~e~~~ll~~A 332 (363)
T 3dp7_A 255 SQFLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDRQRYETASYCLTQISLYF-TAMANG-NSKMFHSDDLIRCIENA 332 (363)
T ss_dssp ESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTSCSSHHHHHHHHHHHHHH-HHSSCS-SCCSCCHHHHHHHHHTT
T ss_pred echhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCCccccchhhHHHHhhhhH-HhhhCC-CCcccCHHHHHHHHHHc
Confidence 99999998774 789999999999999999988765432111100 00010000 001112 45577999999999999
Q ss_pred CCEEEEEEE-eceeEEEEeeCc
Q 018003 332 QLVVNLKLF-YGHIQHYIVKIP 352 (362)
Q Consensus 332 Gf~~v~~~~-~g~~~~~~~~kp 352 (362)
||++++... .|.....+..++
T Consensus 333 Gf~~v~~~~~~g~~~svi~~~~ 354 (363)
T 3dp7_A 333 GLEVEEIQDNIGLGHSILQCRL 354 (363)
T ss_dssp TEEESCCCCCBTTTBEEEEEEE
T ss_pred CCeEEEEEeCCCCCceEEEEee
Confidence 999987763 344333333333
No 68
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.79 E-value=1.7e-18 Score=154.09 Aligned_cols=166 Identities=16% Similarity=0.140 Sum_probs=121.3
Q ss_pred HHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCC
Q 018003 165 EFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF 244 (362)
Q Consensus 165 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~ 244 (362)
..+.+.+.+.+ +.+|||+|||+|.++..+++. .+++|+|+|+.+++.|++++... ..++.++++|+..+++
T Consensus 23 ~~~~~~~~~~~--~~~vLdiG~G~G~~~~~l~~~---~~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~~~d~~~~~~ 93 (243)
T 3d2l_A 23 WVAWVLEQVEP--GKRIADIGCGTGTATLLLADH---YEVTGVDLSEEMLEIAQEKAMET----NRHVDFWVQDMRELEL 93 (243)
T ss_dssp HHHHHHHHSCT--TCEEEEESCTTCHHHHHHTTT---SEEEEEESCHHHHHHHHHHHHHT----TCCCEEEECCGGGCCC
T ss_pred HHHHHHHHcCC--CCeEEEecCCCCHHHHHHhhC---CeEEEEECCHHHHHHHHHhhhhc----CCceEEEEcChhhcCC
Confidence 34556666654 689999999999999998887 49999999999999999988765 3679999999988876
Q ss_pred CCCcceEEEecc-cccCCC---CHHHHHHHHHhhccCCcEEEEEEEccCCCCcc---hhhh----------HHH----HH
Q 018003 245 ASSSIDAVHAGA-AIHCWS---SPSTGVAEISRVLRPGGVFVGTTYIVDGPFNL---IPFS----------RLL----RQ 303 (362)
Q Consensus 245 ~~~~fD~V~~~~-vl~h~~---d~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~---~~~~----------~~~----~~ 303 (362)
+ ++||+|++.. +++|+. ++..+++++.++|||||++++.+++....... ..+. ... ..
T Consensus 94 ~-~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (243)
T 3d2l_A 94 P-EPVDAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFDVHSPYKMETLFNGKTYATHAEQSSYIWFADPGEEPL 172 (243)
T ss_dssp S-SCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEEEECHHHHHTTTSSEEEEEECSSEEEEEEEEECSSTT
T ss_pred C-CCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEEcCCHHHHHHhcCCcceeEECCCcEEEEEeecCcccc
Confidence 5 7899999986 999994 45688999999999999999987754210000 0000 000 00
Q ss_pred hhhhc-----------cc--ccccccccCCHHHHHHHHHHCCCEEEEEEE
Q 018003 304 VCFLD-----------LK--IVGFSIPVLGFDDLKRIFRQFQLVVNLKLF 340 (362)
Q Consensus 304 ~~~~~-----------~~--~~~~~~~~~s~~~l~~ll~~~Gf~~v~~~~ 340 (362)
..... +. ....+.++++.++++++|+++||++++...
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~ 222 (243)
T 3d2l_A 173 SVVHELTFFIEGEDGRYDRVDETHHQRTYPPEQYITWLREAGFRVCAVTG 222 (243)
T ss_dssp EEEEEEEEEEECTTSCEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEEEE
T ss_pred EEEEEEEEEEEcCCCceEEEEEEEeEecCCHHHHHHHHHHCCCeEEEEec
Confidence 00000 00 001145679999999999999999988754
No 69
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.79 E-value=9.4e-19 Score=157.74 Aligned_cols=164 Identities=14% Similarity=0.280 Sum_probs=123.0
Q ss_pred CCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCC-------------------------
Q 018003 174 KPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFP------------------------- 228 (362)
Q Consensus 174 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~------------------------- 228 (362)
...++.+|||+|||+|.++..++..+. .+|+|+|+|+.+++.+++++....+..
T Consensus 53 ~~~~~~~vLDlGcG~G~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (265)
T 2i62_A 53 GAVKGELLIDIGSGPTIYQLLSACESF-TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEK 131 (265)
T ss_dssp SSCCEEEEEEESCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHH
T ss_pred cccCCCEEEEECCCccHHHHHHhhccc-CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHH
Confidence 335678999999999999998888764 589999999999999998875530000
Q ss_pred -CCCE-EEEEecCCCCC-CCC---CcceEEEeccccc----CCCCHHHHHHHHHhhccCCcEEEEEEEccCCCCcchhhh
Q 018003 229 -KENF-LLVRADISRLP-FAS---SSIDAVHAGAAIH----CWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFS 298 (362)
Q Consensus 229 -~~~~-~~~~~d~~~~p-~~~---~~fD~V~~~~vl~----h~~d~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~ 298 (362)
..++ .++++|+...+ +++ ++||+|++..+++ |++++..+++++.++|||||++++.++........
T Consensus 132 l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~---- 207 (265)
T 2i62_A 132 LRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSSYYMI---- 207 (265)
T ss_dssp HHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEE----
T ss_pred hhhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCceEEc----
Confidence 0027 89999998764 355 7899999999999 66678899999999999999999998654321000
Q ss_pred HHHHHhhhhcccccccccccCCHHHHHHHHHHCCCEEEEEEEec-----------eeEEEEeeCcc
Q 018003 299 RLLRQVCFLDLKIVGFSIPVLGFDDLKRIFRQFQLVVNLKLFYG-----------HIQHYIVKIPS 353 (362)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~~Gf~~v~~~~~g-----------~~~~~~~~kp~ 353 (362)
.....+...++.+++.++|+++||++++..... ....++++|+.
T Consensus 208 -----------~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~ 262 (265)
T 2i62_A 208 -----------GEQKFSSLPLGWETVRDAVEEAGYTIEQFEVISQNYSSTTSNNEGLFSLVGRKPG 262 (265)
T ss_dssp -----------TTEEEECCCCCHHHHHHHHHHTTCEEEEEEEECCCCCTTTBCCCCEEEEEEECCC
T ss_pred -----------CCccccccccCHHHHHHHHHHCCCEEEEEEEecccCCccccccceEEEEEecccc
Confidence 000113456899999999999999988877654 34455666654
No 70
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.79 E-value=6.1e-18 Score=160.53 Aligned_cols=166 Identities=14% Similarity=0.089 Sum_probs=125.3
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCCC
Q 018003 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 246 (362)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~~ 246 (362)
..+.+.+...++.+|||||||+|.++..+++..+..+++++|+ +.+++.|++++... +...++.++.+|+.+ +++.
T Consensus 172 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~-~~~~ 247 (374)
T 1qzz_A 172 EAPADAYDWSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADA--GLADRVTVAEGDFFK-PLPV 247 (374)
T ss_dssp HHHHHTSCCTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHT--TCTTTEEEEECCTTS-CCSC
T ss_pred HHHHHhCCCCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhc--CCCCceEEEeCCCCC-cCCC
Confidence 4555666666788999999999999999999987789999999 99999999988765 223489999999965 3343
Q ss_pred CcceEEEecccccCCCCHH--HHHHHHHhhccCCcEEEEEEE--ccCCCCcchhhhHHHHHhhhhcccccccccccCCHH
Q 018003 247 SSIDAVHAGAAIHCWSSPS--TGVAEISRVLRPGGVFVGTTY--IVDGPFNLIPFSRLLRQVCFLDLKIVGFSIPVLGFD 322 (362)
Q Consensus 247 ~~fD~V~~~~vl~h~~d~~--~~l~~i~r~LkpgG~li~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 322 (362)
.||+|++.+++||++++. .+++++.++|||||++++.++ ..... ..+.......... .... ....++.+
T Consensus 248 -~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~--~~~~~~~~~~~~~---~~~~-~~~~~~~~ 320 (374)
T 1qzz_A 248 -TADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDRADVEGDG--ADRFFSTLLDLRM---LTFM-GGRVRTRD 320 (374)
T ss_dssp -CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCH---------HHHHHHHHHHH---HHHH-SCCCCCHH
T ss_pred -CCCEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEechhhcCCC--CCcchhhhcchHH---HHhC-CCcCCCHH
Confidence 499999999999999885 899999999999999999887 43211 1112222221111 0111 34668999
Q ss_pred HHHHHHHHCCCEEEEEEEece
Q 018003 323 DLKRIFRQFQLVVNLKLFYGH 343 (362)
Q Consensus 323 ~l~~ll~~~Gf~~v~~~~~g~ 343 (362)
+|.++|+++||++++....+.
T Consensus 321 ~~~~ll~~aGf~~~~~~~~~~ 341 (374)
T 1qzz_A 321 EVVDLAGSAGLALASERTSGS 341 (374)
T ss_dssp HHHHHHHTTTEEEEEEEEECC
T ss_pred HHHHHHHHCCCceEEEEECCC
Confidence 999999999999988776654
No 71
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.79 E-value=3.4e-19 Score=163.38 Aligned_cols=124 Identities=21% Similarity=0.294 Sum_probs=104.4
Q ss_pred HHHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcC-CCCCCCEEEEEecCCC
Q 018003 163 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-NFPKENFLLVRADISR 241 (362)
Q Consensus 163 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~~~~~~~~~d~~~ 241 (362)
+...+.+.+.+...++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.|+++..... .....++.+..+|+..
T Consensus 43 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~ 120 (293)
T 3thr_A 43 AEYKAWLLGLLRQHGCHRVLDVACGTGVDSIMLVEEGF--SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLT 120 (293)
T ss_dssp HHHHHHHHHHHHHTTCCEEEETTCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGG
T ss_pred HHHHHHHHHHhcccCCCEEEEecCCCCHHHHHHHHCCC--eEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhh
Confidence 44456666666656688999999999999999999876 99999999999999998763320 0012478899999988
Q ss_pred CC---CCCCcceEEEec-ccccCCCC-------HHHHHHHHHhhccCCcEEEEEEEcc
Q 018003 242 LP---FASSSIDAVHAG-AAIHCWSS-------PSTGVAEISRVLRPGGVFVGTTYIV 288 (362)
Q Consensus 242 ~p---~~~~~fD~V~~~-~vl~h~~d-------~~~~l~~i~r~LkpgG~li~~~~~~ 288 (362)
++ +++++||+|++. .+++|+++ +..+++++.++|||||++++.+++.
T Consensus 121 ~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 178 (293)
T 3thr_A 121 LDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRNY 178 (293)
T ss_dssp HHHHSCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred CccccccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCCH
Confidence 87 788999999998 89999999 8999999999999999999999865
No 72
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.79 E-value=1.6e-18 Score=150.05 Aligned_cols=148 Identities=15% Similarity=0.127 Sum_probs=117.0
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCCC
Q 018003 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 246 (362)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~~ 246 (362)
..+...+.+ + +|||+|||+|.++..+++.+. +++|+|+|+.+++.|++++... ..++.++++|+..+++++
T Consensus 22 ~~~~~~~~~--~-~vLdiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~~~d~~~~~~~~ 92 (202)
T 2kw5_A 22 VSVANQIPQ--G-KILCLAEGEGRNACFLASLGY--EVTAVDQSSVGLAKAKQLAQEK----GVKITTVQSNLADFDIVA 92 (202)
T ss_dssp HHHHHHSCS--S-EEEECCCSCTHHHHHHHTTTC--EEEEECSSHHHHHHHHHHHHHH----TCCEEEECCBTTTBSCCT
T ss_pred HHHHHhCCC--C-CEEEECCCCCHhHHHHHhCCC--eEEEEECCHHHHHHHHHHHHhc----CCceEEEEcChhhcCCCc
Confidence 344444443 5 999999999999999998865 9999999999999999988776 348999999999998888
Q ss_pred CcceEEEecccccCC--CCHHHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhcccccccccccCCHHHH
Q 018003 247 SSIDAVHAGAAIHCW--SSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVGFSIPVLGFDDL 324 (362)
Q Consensus 247 ~~fD~V~~~~vl~h~--~d~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l 324 (362)
++||+|++.. .|+ .++..+++++.++|||||.+++.++...... + . . .....+..+++.+++
T Consensus 93 ~~fD~v~~~~--~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~----~------~-~---~~~~~~~~~~~~~~l 156 (202)
T 2kw5_A 93 DAWEGIVSIF--CHLPSSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQ----Y------N-T---GGPKDLDLLPKLETL 156 (202)
T ss_dssp TTCSEEEEEC--CCCCHHHHHHHHHHHHTTCCSSEEEEEEEECTTTGG----G------T-S---CCSSSGGGCCCHHHH
T ss_pred CCccEEEEEh--hcCCHHHHHHHHHHHHHhcCCCcEEEEEEecccccc----C------C-C---CCCCcceeecCHHHH
Confidence 8999999954 444 3667999999999999999999998765321 0 0 0 111125678999999
Q ss_pred HHHHHHCCCEEEEEEEe
Q 018003 325 KRIFRQFQLVVNLKLFY 341 (362)
Q Consensus 325 ~~ll~~~Gf~~v~~~~~ 341 (362)
.++++ ||+++.....
T Consensus 157 ~~~l~--Gf~v~~~~~~ 171 (202)
T 2kw5_A 157 QSELP--SLNWLIANNL 171 (202)
T ss_dssp HHHCS--SSCEEEEEEE
T ss_pred HHHhc--CceEEEEEEE
Confidence 99998 9988765543
No 73
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.78 E-value=1e-17 Score=158.13 Aligned_cols=166 Identities=12% Similarity=0.111 Sum_probs=126.2
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCCC
Q 018003 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 246 (362)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~~ 246 (362)
..+.+.+...++.+|||||||+|.++..+++.++..+++++|+ +.+++.|++++... +...++.++.+|+.+ +++.
T Consensus 173 ~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~-~~~~ 248 (360)
T 1tw3_A 173 DAPAAAYDWTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDE--GLSDRVDVVEGDFFE-PLPR 248 (360)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHT--TCTTTEEEEECCTTS-CCSS
T ss_pred HHHHHhCCCccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhc--CCCCceEEEeCCCCC-CCCC
Confidence 4455566666788999999999999999999988889999999 99999999988765 223489999999875 3343
Q ss_pred CcceEEEecccccCCCCHH--HHHHHHHhhccCCcEEEEEEEc-cCCCCcchhhhHHHHHhhhhcccccccccccCCHHH
Q 018003 247 SSIDAVHAGAAIHCWSSPS--TGVAEISRVLRPGGVFVGTTYI-VDGPFNLIPFSRLLRQVCFLDLKIVGFSIPVLGFDD 323 (362)
Q Consensus 247 ~~fD~V~~~~vl~h~~d~~--~~l~~i~r~LkpgG~li~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 323 (362)
.||+|++..++||++++. .+++++.++|||||++++.++. .... .. +.......... .... +...++.++
T Consensus 249 -~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~-~~-~~~~~~~~~~~---~~~~-~~~~~t~~e 321 (360)
T 1tw3_A 249 -KADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERDDLHEN-SF-NEQFTELDLRM---LVFL-GGALRTREK 321 (360)
T ss_dssp -CEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECCBCGGG-CC-SHHHHHHHHHH---HHHH-SCCCCBHHH
T ss_pred -CccEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEeccCCC-CC-cchhhhccHHH---hhhc-CCcCCCHHH
Confidence 499999999999998874 8999999999999999999876 3211 11 11111111111 0001 346689999
Q ss_pred HHHHHHHCCCEEEEEEEece
Q 018003 324 LKRIFRQFQLVVNLKLFYGH 343 (362)
Q Consensus 324 l~~ll~~~Gf~~v~~~~~g~ 343 (362)
|+++|+++||++++....+.
T Consensus 322 ~~~ll~~aGf~~~~~~~~~~ 341 (360)
T 1tw3_A 322 WDGLAASAGLVVEEVRQLPS 341 (360)
T ss_dssp HHHHHHHTTEEEEEEEEEEC
T ss_pred HHHHHHHCCCeEEEEEeCCC
Confidence 99999999999988776654
No 74
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.78 E-value=6.2e-19 Score=161.71 Aligned_cols=158 Identities=16% Similarity=0.204 Sum_probs=120.9
Q ss_pred CCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCC-CCCcceEEEe
Q 018003 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF-ASSSIDAVHA 254 (362)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~-~~~~fD~V~~ 254 (362)
.++.+|||+|||+|.++..+++.+ ..+++|+|+|+.+++.|++++... ....++.++++|+..+++ ++++||+|++
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~~~~~~~fD~v~~ 139 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERAG-IGEYYGVDIAEVSINDARVRARNM--KRRFKVFFRAQDSYGRHMDLGKEFDVISS 139 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHHT-CSEEEEEESCHHHHHHHHHHHHTS--CCSSEEEEEESCTTTSCCCCSSCEEEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHhc--CCCccEEEEECCccccccCCCCCcCEEEE
Confidence 457899999999999999888875 358999999999999999988764 122478999999999887 5789999999
Q ss_pred cccccC----CCCHHHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHH-------------------h-hhhcc-
Q 018003 255 GAAIHC----WSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQ-------------------V-CFLDL- 309 (362)
Q Consensus 255 ~~vl~h----~~d~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~-------------------~-~~~~~- 309 (362)
..++|| ..++..+++++.++|||||++++.+++... ....+.. . ....+
T Consensus 140 ~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 213 (298)
T 1ri5_A 140 QFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPSRDV------ILERYKQGRMSNDFYKIELEKMEDVPMESVREYR 213 (298)
T ss_dssp ESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEECHHH------HHHHHHHTCCBCSSEEEECCCCSSCCTTTCCEEE
T ss_pred CchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECCHHH------HHHHHccCccCCeeEEEEeCccccccccccceEE
Confidence 999977 456789999999999999999999987531 1110000 0 00000
Q ss_pred -----cccccccccCCHHHHHHHHHHCCCEEEEEEEec
Q 018003 310 -----KIVGFSIPVLGFDDLKRIFRQFQLVVNLKLFYG 342 (362)
Q Consensus 310 -----~~~~~~~~~~s~~~l~~ll~~~Gf~~v~~~~~g 342 (362)
.....+..+++.++++++|+++||++++...++
T Consensus 214 ~~l~~~~~~~~~~~~~~~~l~~ll~~aGf~~v~~~~~~ 251 (298)
T 1ri5_A 214 FTLLDSVNNCIEYFVDFTRMVDGFKRLGLSLVERKGFI 251 (298)
T ss_dssp EEETTSCSSEEEECCCHHHHHHHHHTTTEEEEEEEEHH
T ss_pred EEEchhhcCCcccccCHHHHHHHHHHcCCEEEEecCHH
Confidence 000113567899999999999999998876654
No 75
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.78 E-value=2.8e-19 Score=164.23 Aligned_cols=155 Identities=14% Similarity=0.091 Sum_probs=112.6
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCC-----------------------------
Q 018003 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNF----------------------------- 227 (362)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~----------------------------- 227 (362)
++.+|||||||+|.++..+++..+..+|+|+|+|+.+++.|++++......
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 578999999999999999999865679999999999999999876543000
Q ss_pred --------------------------CCCCEEEEEecCCCCC-----CCCCcceEEEecccccCCC------CHHHHHHH
Q 018003 228 --------------------------PKENFLLVRADISRLP-----FASSSIDAVHAGAAIHCWS------SPSTGVAE 270 (362)
Q Consensus 228 --------------------------~~~~~~~~~~d~~~~p-----~~~~~fD~V~~~~vl~h~~------d~~~~l~~ 270 (362)
...++.+.++|+...+ +..++||+|++..+++|+. ++..++++
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~ 205 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRR 205 (292)
T ss_dssp ----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHH
Confidence 0148999999997654 5678999999999998874 67789999
Q ss_pred HHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhcccccccccccCCHHHHHHHHHH--CCCEEEEEEE
Q 018003 271 ISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVGFSIPVLGFDDLKRIFRQ--FQLVVNLKLF 340 (362)
Q Consensus 271 i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~--~Gf~~v~~~~ 340 (362)
+.++|||||+|++....+..+.........+.... +...+.++++..+|.+ +||+.++...
T Consensus 206 ~~~~LkpGG~lil~~~~~~~y~~~~~~~~~~~~~~---------~~~~~~p~~~~~~L~~~~~GF~~~~~~~ 268 (292)
T 3g07_A 206 IYRHLRPGGILVLEPQPWSSYGKRKTLTETIYKNY---------YRIQLKPEQFSSYLTSPDVGFSSYELVA 268 (292)
T ss_dssp HHHHEEEEEEEEEECCCHHHHHTTTTSCHHHHHHH---------HHCCCCGGGHHHHHTSTTTCCCEEEEC-
T ss_pred HHHHhCCCcEEEEecCCchhhhhhhcccHHHHhhh---------hcEEEcHHHHHHHHHhcCCCceEEEEec
Confidence 99999999999997654321111000011111111 2233557899999999 9997766543
No 76
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.78 E-value=7.1e-18 Score=157.63 Aligned_cols=166 Identities=14% Similarity=0.069 Sum_probs=126.4
Q ss_pred HHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCC
Q 018003 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 245 (362)
Q Consensus 166 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~ 245 (362)
...+.+.+...+ .+|||+|||+|.++..+++..+..+++++|+ +.+++.|++++... +...++.++.+|+.. +++
T Consensus 157 ~~~~~~~~~~~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~-~~~ 231 (334)
T 2ip2_A 157 FHEIPRLLDFRG-RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSL--LAGERVSLVGGDMLQ-EVP 231 (334)
T ss_dssp HHHHHHHSCCTT-CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHH--HHTTSEEEEESCTTT-CCC
T ss_pred HHHHHHhCCCCC-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhc--CCCCcEEEecCCCCC-CCC
Confidence 345555555555 8999999999999999999987789999999 99999999886543 113579999999977 555
Q ss_pred CCcceEEEecccccCCCCHH--HHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhcccccccccccCCHHH
Q 018003 246 SSSIDAVHAGAAIHCWSSPS--TGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVGFSIPVLGFDD 323 (362)
Q Consensus 246 ~~~fD~V~~~~vl~h~~d~~--~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 323 (362)
++||+|++..++||++++. .++++++++|||||++++.++..+.... +.......... .... ....++.++
T Consensus 232 -~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~--~~~~~~~~~~~---~~~~-~~~~~t~~e 304 (334)
T 2ip2_A 232 -SNGDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERTISASEP--SPMSVLWDVHL---FMAC-AGRHRTTEE 304 (334)
T ss_dssp -SSCSEEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSSC--CHHHHHHHHHH---HHHH-SCCCCBHHH
T ss_pred -CCCCEEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCC--cchhHHhhhHh---HhhC-CCcCCCHHH
Confidence 6799999999999998877 9999999999999999999877543211 22222211111 0001 234568999
Q ss_pred HHHHHHHCCCEEEEEEEece
Q 018003 324 LKRIFRQFQLVVNLKLFYGH 343 (362)
Q Consensus 324 l~~ll~~~Gf~~v~~~~~g~ 343 (362)
|+++++++||++++....+.
T Consensus 305 ~~~ll~~aGf~~~~~~~~~~ 324 (334)
T 2ip2_A 305 VVDLLGRGGFAVERIVDLPM 324 (334)
T ss_dssp HHHHHHHTTEEEEEEEEETT
T ss_pred HHHHHHHCCCceeEEEECCC
Confidence 99999999999988776544
No 77
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.77 E-value=7.6e-18 Score=153.08 Aligned_cols=155 Identities=16% Similarity=0.128 Sum_probs=116.9
Q ss_pred HHHhhcC-CCCCCeEEEEcCcc---chHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC
Q 018003 168 LMKGYLK-PVLGGNIIDASCGS---GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP 243 (362)
Q Consensus 168 ~l~~~l~-~~~~~~vLDiGcG~---G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p 243 (362)
.+.+++. .....+|||||||+ |.++..+.+..+..+|+++|+|+.|++.|++++... .++.++++|+.+.+
T Consensus 67 ~~~~~l~~~~~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~-----~~v~~~~~D~~~~~ 141 (274)
T 2qe6_A 67 RGVRFLAGEAGISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAKD-----PNTAVFTADVRDPE 141 (274)
T ss_dssp HHHHHHHTTTCCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTTC-----TTEEEEECCTTCHH
T ss_pred HHHHHHhhccCCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCCC-----CCeEEEEeeCCCch
Confidence 3444443 23347999999999 998888877777789999999999999999987543 68999999997632
Q ss_pred -----------CCCCcceEEEecccccCCCC--HHHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhccc
Q 018003 244 -----------FASSSIDAVHAGAAIHCWSS--PSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLK 310 (362)
Q Consensus 244 -----------~~~~~fD~V~~~~vl~h~~d--~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (362)
++..+||+|++..+|||+++ +..+|+++.++|||||+|++.+...+.. .....+...+. .
T Consensus 142 ~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~~~~----~~~~~~~~~~~---~ 214 (274)
T 2qe6_A 142 YILNHPDVRRMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVDTGL----PAQQKLARITR---E 214 (274)
T ss_dssp HHHHSHHHHHHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBCSSC----HHHHHHHHHHH---H
T ss_pred hhhccchhhccCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecCcch----HHHHHHHHHHH---h
Confidence 22357999999999999987 8899999999999999999999876421 11122222111 0
Q ss_pred ccccccccCCHHHHHHHHHHCCCEEEE
Q 018003 311 IVGFSIPVLGFDDLKRIFRQFQLVVNL 337 (362)
Q Consensus 311 ~~~~~~~~~s~~~l~~ll~~~Gf~~v~ 337 (362)
... ...+++.+++.++| .||++++
T Consensus 215 ~~~-~~~~~s~~ei~~~l--~G~~l~~ 238 (274)
T 2qe6_A 215 NLG-EGWARTPEEIERQF--GDFELVE 238 (274)
T ss_dssp HHS-CCCCBCHHHHHHTT--TTCEECT
T ss_pred cCC-CCccCCHHHHHHHh--CCCeEcc
Confidence 111 35668999999999 5997764
No 78
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.77 E-value=2.4e-18 Score=150.56 Aligned_cols=114 Identities=15% Similarity=0.227 Sum_probs=100.4
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCCC
Q 018003 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 246 (362)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~~ 246 (362)
..+...+...++.+|||+|||+|.++..+++.+. +++|+|+|+.+++.|++++... .++.++++|+..++ ++
T Consensus 41 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~d~~~~~-~~ 112 (216)
T 3ofk_A 41 QLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPHCK--RLTVIDVMPRAIGRACQRTKRW-----SHISWAATDILQFS-TA 112 (216)
T ss_dssp HHHHHHTTTSSEEEEEEECCTTSHHHHHHGGGEE--EEEEEESCHHHHHHHHHHTTTC-----SSEEEEECCTTTCC-CS
T ss_pred HHHHHHcccCCCCcEEEEcCCCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHhcccC-----CCeEEEEcchhhCC-CC
Confidence 3444556666788999999999999999999875 9999999999999999987654 48999999999988 67
Q ss_pred CcceEEEecccccCCCCH---HHHHHHHHhhccCCcEEEEEEEcc
Q 018003 247 SSIDAVHAGAAIHCWSSP---STGVAEISRVLRPGGVFVGTTYIV 288 (362)
Q Consensus 247 ~~fD~V~~~~vl~h~~d~---~~~l~~i~r~LkpgG~li~~~~~~ 288 (362)
++||+|++..+++|++++ ..+++++.++|||||.+++.++..
T Consensus 113 ~~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 157 (216)
T 3ofk_A 113 ELFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSARD 157 (216)
T ss_dssp CCEEEEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred CCccEEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEecCC
Confidence 899999999999999998 467999999999999999988753
No 79
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.77 E-value=1.4e-18 Score=159.16 Aligned_cols=160 Identities=16% Similarity=0.201 Sum_probs=112.7
Q ss_pred HHHHhhcCC--CCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCC-------------C--
Q 018003 167 ELMKGYLKP--VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFP-------------K-- 229 (362)
Q Consensus 167 ~~l~~~l~~--~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~-------------~-- 229 (362)
..+.+.+.. .++.+|||||||+|.+...++.. ...+|+|+|+|+.|++.|++++....+.. .
T Consensus 59 ~~l~~~l~~~~~~~~~vLDiGcG~G~~~~l~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~ 137 (289)
T 2g72_A 59 RCLAQTFATGEVSGRTLIDIGSGPTVYQLLSACS-HFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKG 137 (289)
T ss_dssp HHHHHHHHTSCSCCSEEEEETCTTCCGGGTTGGG-GCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSC
T ss_pred HHHHHHhCCCCCCCCeEEEECCCcChHHHHhhcc-CCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcc
Confidence 344444432 35789999999999955443332 23499999999999999998654320000 0
Q ss_pred ------------CCEEEEEecCCC-CCC-----CCCcceEEEecccccC----CCCHHHHHHHHHhhccCCcEEEEEEEc
Q 018003 230 ------------ENFLLVRADISR-LPF-----ASSSIDAVHAGAAIHC----WSSPSTGVAEISRVLRPGGVFVGTTYI 287 (362)
Q Consensus 230 ------------~~~~~~~~d~~~-~p~-----~~~~fD~V~~~~vl~h----~~d~~~~l~~i~r~LkpgG~li~~~~~ 287 (362)
..+.++.+|+.. +|+ ++++||+|+++.+++| ++++..+|+++.++|||||+|++....
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~ 217 (289)
T 2g72_A 138 ECWQDKERQLRARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGAL 217 (289)
T ss_dssp CCHHHHHHHHHHHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEE
T ss_pred cchhhhHHHHHhhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 015677789987 654 3467999999999999 667889999999999999999998643
Q ss_pred cCCCCcchhhhHHHHHhhhhcccccccccccCCHHHHHHHHHHCCCEEEEEEEec
Q 018003 288 VDGPFNLIPFSRLLRQVCFLDLKIVGFSIPVLGFDDLKRIFRQFQLVVNLKLFYG 342 (362)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~~Gf~~v~~~~~g 342 (362)
....... .....+..+++.+++.++|+++||++++.....
T Consensus 218 ~~~~~~~---------------~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~~~ 257 (289)
T 2g72_A 218 EESWYLA---------------GEARLTVVPVSEEEVREALVRSGYKVRDLRTYI 257 (289)
T ss_dssp SCCEEEE---------------TTEEEECCCCCHHHHHHHHHHTTEEEEEEEEEE
T ss_pred CcceEEc---------------CCeeeeeccCCHHHHHHHHHHcCCeEEEeeEee
Confidence 3211000 000113567899999999999999888776554
No 80
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.77 E-value=5.2e-18 Score=159.55 Aligned_cols=169 Identities=12% Similarity=0.050 Sum_probs=122.1
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCCC
Q 018003 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 246 (362)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~~ 246 (362)
..+.+.+...++.+|||||||+|.++..+++..+..+++++|++ .++. +++.+.. ....++.++.+|+. .+++
T Consensus 174 ~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~--~~~~~~~--~~~~~v~~~~~d~~-~~~p- 246 (348)
T 3lst_A 174 LILARAGDFPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRA-EVVA--RHRLDAP--DVAGRWKVVEGDFL-REVP- 246 (348)
T ss_dssp HHHHHHSCCCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECH-HHHT--TCCCCCG--GGTTSEEEEECCTT-TCCC-
T ss_pred HHHHHhCCccCCceEEEECCccCHHHHHHHHHCCCCEEEEecCH-HHhh--ccccccc--CCCCCeEEEecCCC-CCCC-
Confidence 34556666667889999999999999999999888899999994 4444 2222111 12467999999996 3444
Q ss_pred CcceEEEecccccCCCCH--HHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhcccccccccccCCHHHH
Q 018003 247 SSIDAVHAGAAIHCWSSP--STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVGFSIPVLGFDDL 324 (362)
Q Consensus 247 ~~fD~V~~~~vl~h~~d~--~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l 324 (362)
+||+|++.+++||++|+ ..+|++++++|||||++++.++..+... .+.......... .... ....++.++|
T Consensus 247 -~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~--~~~~~~~~d~~~---~~~~-~~~~~t~~e~ 319 (348)
T 3lst_A 247 -HADVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPEGN--DAHQSKEMDFMM---LAAR-TGQERTAAEL 319 (348)
T ss_dssp -CCSEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCSSS--SCCHHHHHHHHH---HHTT-SCCCCBHHHH
T ss_pred -CCcEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCC--CcchhhhcChhh---hhcC-CCcCCCHHHH
Confidence 79999999999999988 5999999999999999999987664321 111111111111 1111 3456899999
Q ss_pred HHHHHHCCCEEEEEEEeceeEEEEe
Q 018003 325 KRIFRQFQLVVNLKLFYGHIQHYIV 349 (362)
Q Consensus 325 ~~ll~~~Gf~~v~~~~~g~~~~~~~ 349 (362)
+++++++||++++....+.....+.
T Consensus 320 ~~ll~~aGf~~~~~~~~~~~~~vie 344 (348)
T 3lst_A 320 EPLFTAAGLRLDRVVGTSSVMSIAV 344 (348)
T ss_dssp HHHHHHTTEEEEEEEECSSSCEEEE
T ss_pred HHHHHHCCCceEEEEECCCCcEEEE
Confidence 9999999999998877544433333
No 81
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.77 E-value=1.7e-17 Score=157.18 Aligned_cols=165 Identities=10% Similarity=0.003 Sum_probs=122.5
Q ss_pred HHHHhhcC-CCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCC
Q 018003 167 ELMKGYLK-PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 245 (362)
Q Consensus 167 ~~l~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~ 245 (362)
..+.+.+. ..+..+|||||||+|.++..+++..+..+++++|+ +.+++.+++ ..++.++.+|+.+ |++
T Consensus 192 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~---------~~~v~~~~~d~~~-~~p 260 (368)
T 3reo_A 192 KKILEMYNGFEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPA---------FSGVEHLGGDMFD-GVP 260 (368)
T ss_dssp HHHHTTCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC---------CTTEEEEECCTTT-CCC
T ss_pred HHHHHhcccccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhh---------cCCCEEEecCCCC-CCC
Confidence 34555554 45578999999999999999999988889999999 888877764 3689999999986 666
Q ss_pred CCcceEEEecccccCCCCHH--HHHHHHHhhccCCcEEEEEEEccCCCCcch--hhhHHHHHhhhhcccccccccccCCH
Q 018003 246 SSSIDAVHAGAAIHCWSSPS--TGVAEISRVLRPGGVFVGTTYIVDGPFNLI--PFSRLLRQVCFLDLKIVGFSIPVLGF 321 (362)
Q Consensus 246 ~~~fD~V~~~~vl~h~~d~~--~~l~~i~r~LkpgG~li~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~s~ 321 (362)
.+ |+|++.+++||++++. .+|++++++|||||++++.+...+...... ............ .... ....++.
T Consensus 261 ~~--D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~--~~~~-~g~~rt~ 335 (368)
T 3reo_A 261 KG--DAIFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALML--AYNP-GGKERTE 335 (368)
T ss_dssp CC--SEEEEESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECCCCSSCCCCHHHHHHHHHHHHHH--HHSS-BCCCCCH
T ss_pred CC--CEEEEechhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhhhHHHhhhHHHH--hhcC-CCccCCH
Confidence 54 9999999999998775 789999999999999999988764322111 111111111110 0111 3456789
Q ss_pred HHHHHHHHHCCCEEEEEEEeceeEEE
Q 018003 322 DDLKRIFRQFQLVVNLKLFYGHIQHY 347 (362)
Q Consensus 322 ~~l~~ll~~~Gf~~v~~~~~g~~~~~ 347 (362)
++|+++|+++||+.++..........
T Consensus 336 ~e~~~ll~~AGF~~v~~~~~~~~~~v 361 (368)
T 3reo_A 336 KEFQALAMASGFRGFKVASCAFNTYV 361 (368)
T ss_dssp HHHHHHHHHTTCCEEEEEEEETTEEE
T ss_pred HHHHHHHHHCCCeeeEEEEeCCCcEE
Confidence 99999999999999887766544333
No 82
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.76 E-value=3.4e-17 Score=140.17 Aligned_cols=127 Identities=19% Similarity=0.200 Sum_probs=109.5
Q ss_pred CCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCCCCcceEEEec
Q 018003 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAG 255 (362)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~~~~fD~V~~~ 255 (362)
.++.+|||+|||+|.++..+++.+. +++|+|+++.+++.++++ ..++.++++|+..+++++++||+|++.
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~~D~~~~~~~~a~~~--------~~~~~~~~~d~~~~~~~~~~~D~i~~~ 114 (195)
T 3cgg_A 45 PRGAKILDAGCGQGRIGGYLSKQGH--DVLGTDLDPILIDYAKQD--------FPEARWVVGDLSVDQISETDFDLIVSA 114 (195)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTTC--EEEEEESCHHHHHHHHHH--------CTTSEEEECCTTTSCCCCCCEEEEEEC
T ss_pred cCCCeEEEECCCCCHHHHHHHHCCC--cEEEEcCCHHHHHHHHHh--------CCCCcEEEcccccCCCCCCceeEEEEC
Confidence 3578999999999999999999864 999999999999999986 356899999999988888899999998
Q ss_pred -ccccCCCC--HHHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhcccccccccccCCHHHHHHHHHHCC
Q 018003 256 -AAIHCWSS--PSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVGFSIPVLGFDDLKRIFRQFQ 332 (362)
Q Consensus 256 -~vl~h~~d--~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~~G 332 (362)
.+++|+.+ ...+++++.++|||||.+++..+.. ..++.+++.++++++|
T Consensus 115 ~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~~----------------------------~~~~~~~~~~~l~~~G 166 (195)
T 3cgg_A 115 GNVMGFLAEDGREPALANIHRALGADGRAVIGFGAG----------------------------RGWVFGDFLEVAERVG 166 (195)
T ss_dssp CCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEETT----------------------------SSCCHHHHHHHHHHHT
T ss_pred CcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEeCCC----------------------------CCcCHHHHHHHHHHcC
Confidence 78999853 4789999999999999999987642 1257789999999999
Q ss_pred CEEEEEEE
Q 018003 333 LVVNLKLF 340 (362)
Q Consensus 333 f~~v~~~~ 340 (362)
|++++...
T Consensus 167 f~~~~~~~ 174 (195)
T 3cgg_A 167 LELENAFE 174 (195)
T ss_dssp EEEEEEES
T ss_pred CEEeeeec
Confidence 99877644
No 83
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.75 E-value=2.8e-17 Score=165.14 Aligned_cols=168 Identities=10% Similarity=0.097 Sum_probs=126.1
Q ss_pred HHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHhhcCC---CCCCCEEEEEecC
Q 018003 164 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSG-LFSLVVALDYSENMLKQCYEFVQQESN---FPKENFLLVRADI 239 (362)
Q Consensus 164 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~---~~~~~~~~~~~d~ 239 (362)
...+.+.+.+...++.+|||||||+|.++..+++.+ +..+|+|+|+|+.|++.|++++....+ ....++.++++|+
T Consensus 708 qRle~LLelL~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa 787 (950)
T 3htx_A 708 QRVEYALKHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSI 787 (950)
T ss_dssp HHHHHHHHHHHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCT
T ss_pred HHHHHHHHHhcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECch
Confidence 335556666665678899999999999999999987 446999999999999999997654311 1245899999999
Q ss_pred CCCCCCCCcceEEEecccccCCCCHH--HHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHH-------H--Hhhhhc
Q 018003 240 SRLPFASSSIDAVHAGAAIHCWSSPS--TGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLL-------R--QVCFLD 308 (362)
Q Consensus 240 ~~~p~~~~~fD~V~~~~vl~h~~d~~--~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~-------~--~~~~~~ 308 (362)
..+++.+++||+|++..+++|++++. .+++++.++|||| .+++.+++.+. ...+..+ . ......
T Consensus 788 ~dLp~~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN~ey----N~lF~~Lnp~tr~~dPd~~~~~~ 862 (950)
T 3htx_A 788 LEFDSRLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPNYEF----NTILQRSTPETQEENNSEPQLPK 862 (950)
T ss_dssp TSCCTTSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECBGGG----HHHHTCC------------CCSS
T ss_pred HhCCcccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecCchh----hhhhhhccccccccccccccccc
Confidence 99999889999999999999999876 5899999999999 89999987632 1111111 0 000111
Q ss_pred ccccccccccCCHHHHHH----HHHHCCCEEEE
Q 018003 309 LKIVGFSIPVLGFDDLKR----IFRQFQLVVNL 337 (362)
Q Consensus 309 ~~~~~~~~~~~s~~~l~~----ll~~~Gf~~v~ 337 (362)
+.... |...|+.++++. +.++.||.+.-
T Consensus 863 fRh~D-HrFEWTReEFr~Wae~LAer~GYsVef 894 (950)
T 3htx_A 863 FRNHD-HKFEWTREQFNQWASKLGKRHNYSVEF 894 (950)
T ss_dssp CSCSS-CSCCBCHHHHHHHHHHHHHHTTEEEEE
T ss_pred ccccC-cceeecHHHHHHHHHHHHHhcCcEEEE
Confidence 12223 566688888887 77888996643
No 84
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.75 E-value=5.4e-17 Score=152.83 Aligned_cols=176 Identities=11% Similarity=0.073 Sum_probs=133.9
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCCC
Q 018003 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 246 (362)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~~ 246 (362)
..+.+.+......+|||||||+|.++..++++.|..+++..|. +.+++.|++++... ...+++++.+|+...|.+
T Consensus 169 ~~~~~~~~~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~---~~~rv~~~~gD~~~~~~~- 243 (353)
T 4a6d_A 169 RSVLTAFDLSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQ---EEEQIDFQEGDFFKDPLP- 243 (353)
T ss_dssp HHHHHSSCGGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC-----CCSEEEEESCTTTSCCC-
T ss_pred HHHHHhcCcccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhc---ccCceeeecCccccCCCC-
Confidence 4455555555678999999999999999999999999999998 88999999886543 257899999999876654
Q ss_pred CcceEEEecccccCCCCHH--HHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhcccccccccccCCHHHH
Q 018003 247 SSIDAVHAGAAIHCWSSPS--TGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVGFSIPVLGFDDL 324 (362)
Q Consensus 247 ~~fD~V~~~~vl~h~~d~~--~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l 324 (362)
.+|+|++.++||+++|+. .+|+++++.|+|||++++.+...+.. ...+.........+ .... .....|.++|
T Consensus 244 -~~D~~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~-~~~~~~~~~~dl~m---l~~~-~g~ert~~e~ 317 (353)
T 4a6d_A 244 -EADLYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDED-RRGPLLTQLYSLNM---LVQT-EGQERTPTHY 317 (353)
T ss_dssp -CCSEEEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCTT-SCCCHHHHHHHHHH---HHSS-SCCCCCHHHH
T ss_pred -CceEEEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCC-CCCCHHHHHHHHHH---HHhC-CCcCCCHHHH
Confidence 479999999999999884 78999999999999999998876432 22233333222221 1111 2345799999
Q ss_pred HHHHHHCCCEEEEEEEecee-EEEEeeCcc
Q 018003 325 KRIFRQFQLVVNLKLFYGHI-QHYIVKIPS 353 (362)
Q Consensus 325 ~~ll~~~Gf~~v~~~~~g~~-~~~~~~kp~ 353 (362)
+++|+++||+.++++..+.. ..++++|-.
T Consensus 318 ~~ll~~AGf~~v~v~~~~~~~~~i~ArKgt 347 (353)
T 4a6d_A 318 HMLLSSAGFRDFQFKKTGAIYDAILARKGT 347 (353)
T ss_dssp HHHHHHHTCEEEEEECCSSSCEEEEEECCC
T ss_pred HHHHHHCCCceEEEEEcCCceEEEEEEecC
Confidence 99999999999988766554 566677653
No 85
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.75 E-value=3.2e-18 Score=157.71 Aligned_cols=164 Identities=16% Similarity=0.146 Sum_probs=112.1
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCC----CCCEEEEEecC------CCC--CC
Q 018003 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFP----KENFLLVRADI------SRL--PF 244 (362)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~----~~~~~~~~~d~------~~~--p~ 244 (362)
++.+|||||||+|..+..++..+ ..+|+|+|+|+.|++.|+++..... .. ..++.+.++|+ ..+ ++
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~-~~~v~GiD~S~~~l~~A~~~~~~~~-~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~ 125 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGE-IALLVATDPDADAIARGNERYNKLN-SGIKTKYYKFDYIQETIRSDTFVSSVREVF 125 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHHC-C----CCCEEEEEECCTTSSSHHHHHHTTC
T ss_pred CCCeEEEEecCCcHhHHHHHhcC-CCeEEEEECCHHHHHHHHHHHHhcc-ccccccccccchhhhhcccchhhhhhhccc
Confidence 47899999999998666555554 3489999999999999999877650 00 00267888887 222 34
Q ss_pred CCCcceEEEecccccCC---CCHHHHHHHHHhhccCCcEEEEEEEccCCCCcc---------------hhhhHHHH---H
Q 018003 245 ASSSIDAVHAGAAIHCW---SSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNL---------------IPFSRLLR---Q 303 (362)
Q Consensus 245 ~~~~fD~V~~~~vl~h~---~d~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~---------------~~~~~~~~---~ 303 (362)
++++||+|+|..++||+ .+...+|++++++|||||++++.+++....... ..+. ... .
T Consensus 126 ~~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~ 204 (302)
T 2vdw_A 126 YFGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMDGDKLSKLTDKKTFIIHKNLPSSENYM-SVEKIAD 204 (302)
T ss_dssp CSSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEECHHHHTTCCSCEEEECCSSSCTTTSEE-EECEEET
T ss_pred cCCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHhcCCccccccccccccee-eeccccc
Confidence 57899999999999876 355799999999999999999999875321100 0000 000 0
Q ss_pred -h---hhhcccccccccccCCHHHHHHHHHHCCCEEEEEEEece
Q 018003 304 -V---CFLDLKIVGFSIPVLGFDDLKRIFRQFQLVVNLKLFYGH 343 (362)
Q Consensus 304 -~---~~~~~~~~~~~~~~~s~~~l~~ll~~~Gf~~v~~~~~g~ 343 (362)
. +............+.+.+++.++++++||+.+....+..
T Consensus 205 ~~~~~~~~~~~~~~~~e~~v~~~el~~l~~~~Gl~lv~~~~f~~ 248 (302)
T 2vdw_A 205 DRIVVYNPSTMSTPMTEYIIKKNDIVRVFNEYGFVLVDNVDFAT 248 (302)
T ss_dssp TEEEEBCTTTBSSCEEEECCCHHHHHHHHHHTTEEEEEEEEHHH
T ss_pred cccceeeccccCCCceeeeeEHHHHHHHHHHCCCEEEEecChHH
Confidence 0 000000111123467889999999999999988876543
No 86
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.75 E-value=2.4e-17 Score=156.43 Aligned_cols=156 Identities=12% Similarity=0.027 Sum_probs=119.0
Q ss_pred HHHHhhcC-CCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCC
Q 018003 167 ELMKGYLK-PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 245 (362)
Q Consensus 167 ~~l~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~ 245 (362)
..+.+.+. ..++.+|||||||+|.++..+++.++..+++++|+ +.+++.|++ ..++.++.+|+.. +++
T Consensus 198 ~~l~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~---------~~~v~~~~~d~~~-~~~ 266 (372)
T 1fp1_D 198 KRMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPP---------LSGIEHVGGDMFA-SVP 266 (372)
T ss_dssp HHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC---------CTTEEEEECCTTT-CCC
T ss_pred HHHHHHhhccCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhh---------cCCCEEEeCCccc-CCC
Confidence 34444544 45578999999999999999999988889999999 889887764 3579999999977 655
Q ss_pred CCcceEEEecccccCCCCHH--HHHHHHHhhccCCcEEEEEEEccCCCCcchhh---hHHHHHhhhhcccccccccccCC
Q 018003 246 SSSIDAVHAGAAIHCWSSPS--TGVAEISRVLRPGGVFVGTTYIVDGPFNLIPF---SRLLRQVCFLDLKIVGFSIPVLG 320 (362)
Q Consensus 246 ~~~fD~V~~~~vl~h~~d~~--~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~s 320 (362)
. ||+|++..++||++|+. .+|++++++|||||++++.++..+... ..+. ......... .... ....++
T Consensus 267 ~--~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~-~~~~~~~~~~~~d~~~---~~~~-~~~~~t 339 (372)
T 1fp1_D 267 Q--GDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILPEEP-NTSEESKLVSTLDNLM---FITV-GGRERT 339 (372)
T ss_dssp C--EEEEEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEECSSC-CSSHHHHHHHHHHHHH---HHHH-SCCCEE
T ss_pred C--CCEEEEecccccCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCC-ccchHHHHHHHhhHHH---Hhcc-CCccCC
Confidence 4 99999999999999988 999999999999999999987654321 1111 111111111 0011 235579
Q ss_pred HHHHHHHHHHCCCEEEEEEE
Q 018003 321 FDDLKRIFRQFQLVVNLKLF 340 (362)
Q Consensus 321 ~~~l~~ll~~~Gf~~v~~~~ 340 (362)
.++|+++++++||++++...
T Consensus 340 ~~e~~~ll~~aGf~~~~~~~ 359 (372)
T 1fp1_D 340 EKQYEKLSKLSGFSKFQVAC 359 (372)
T ss_dssp HHHHHHHHHHTTCSEEEEEE
T ss_pred HHHHHHHHHHCCCceEEEEE
Confidence 99999999999999888766
No 87
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.75 E-value=1.3e-17 Score=148.72 Aligned_cols=151 Identities=15% Similarity=0.033 Sum_probs=114.9
Q ss_pred CCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCCC-----Ccce
Q 018003 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS-----SSID 250 (362)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~~-----~~fD 250 (362)
.++.+|||+|||+|.++..+++.++ +|+|+|+|+.+++.|++++. ..++.++++|+..++... ..||
T Consensus 55 ~~~~~vLD~GcG~G~~~~~la~~~~--~v~gvD~s~~~~~~a~~~~~------~~~~~~~~~d~~~~~~~~~~~~~~~~d 126 (245)
T 3ggd_A 55 NPELPLIDFACGNGTQTKFLSQFFP--RVIGLDVSKSALEIAAKENT------AANISYRLLDGLVPEQAAQIHSEIGDA 126 (245)
T ss_dssp CTTSCEEEETCTTSHHHHHHHHHSS--CEEEEESCHHHHHHHHHHSC------CTTEEEEECCTTCHHHHHHHHHHHCSC
T ss_pred CCCCeEEEEcCCCCHHHHHHHHhCC--CEEEEECCHHHHHHHHHhCc------ccCceEEECcccccccccccccccCcc
Confidence 4578999999999999999999987 99999999999999999752 348999999998865432 2499
Q ss_pred EEEecccccCCC--CHHHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhh------cccccccccccCCHH
Q 018003 251 AVHAGAAIHCWS--SPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFL------DLKIVGFSIPVLGFD 322 (362)
Q Consensus 251 ~V~~~~vl~h~~--d~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~s~~ 322 (362)
+|++..+++|++ ++..+++++.++|||||++++.++.... ..++..+...... .....+.....++.+
T Consensus 127 ~v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (245)
T 3ggd_A 127 NIYMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIELGTGC----IDFFNSLLEKYGQLPYELLLVMEHGIRPGIFTAE 202 (245)
T ss_dssp EEEEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEECTTH----HHHHHHHHHHHSSCCHHHHHHHTTTCCCCCCCHH
T ss_pred EEEEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCccc----cHHHHHHHhCCCCCchhhhhccccCCCCCccCHH
Confidence 999999999998 7889999999999999999999886532 1222221111000 000001123457999
Q ss_pred HHHHHHHHCCCEEEEEEE
Q 018003 323 DLKRIFRQFQLVVNLKLF 340 (362)
Q Consensus 323 ~l~~ll~~~Gf~~v~~~~ 340 (362)
++.+++ +||+++....
T Consensus 203 ~~~~~~--aGf~~~~~~~ 218 (245)
T 3ggd_A 203 DIELYF--PDFEILSQGE 218 (245)
T ss_dssp HHHHHC--TTEEEEEEEC
T ss_pred HHHHHh--CCCEEEeccc
Confidence 999999 9999887543
No 88
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.75 E-value=2.5e-17 Score=147.50 Aligned_cols=114 Identities=23% Similarity=0.344 Sum_probs=94.1
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCCC
Q 018003 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 246 (362)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~~ 246 (362)
..+.......++.+|||+|||+|.++..+++.+. +++|+|+|+.+++.|++++... ..++.++++|+..++++
T Consensus 31 ~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~~~~~~~----~~~v~~~~~d~~~~~~~- 103 (252)
T 1wzn_A 31 EEIFKEDAKREVRRVLDLACGTGIPTLELAERGY--EVVGLDLHEEMLRVARRKAKER----NLKIEFLQGDVLEIAFK- 103 (252)
T ss_dssp HHHHHHTCSSCCCEEEEETCTTCHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT----TCCCEEEESCGGGCCCC-
T ss_pred HHHHHHhcccCCCEEEEeCCCCCHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHHhc----CCceEEEECChhhcccC-
Confidence 3344444445678999999999999999999865 9999999999999999988765 34799999999888764
Q ss_pred CcceEEEecc-cccCCC--CHHHHHHHHHhhccCCcEEEEEEEc
Q 018003 247 SSIDAVHAGA-AIHCWS--SPSTGVAEISRVLRPGGVFVGTTYI 287 (362)
Q Consensus 247 ~~fD~V~~~~-vl~h~~--d~~~~l~~i~r~LkpgG~li~~~~~ 287 (362)
++||+|++.. +++|+. ++..+++++.++|||||.+++..++
T Consensus 104 ~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~~~ 147 (252)
T 1wzn_A 104 NEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITDFPC 147 (252)
T ss_dssp SCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEeccc
Confidence 6899999874 455553 4568999999999999999998776
No 89
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.75 E-value=4.4e-17 Score=154.07 Aligned_cols=162 Identities=14% Similarity=0.037 Sum_probs=121.4
Q ss_pred HHHHhhcC-CCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCC
Q 018003 167 ELMKGYLK-PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 245 (362)
Q Consensus 167 ~~l~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~ 245 (362)
..+.+.+. ..+..+|||||||+|.++..+++..+..+++++|+ +.+++.|++ ..++.++.+|+.. |++
T Consensus 190 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~---------~~~v~~~~~D~~~-~~p 258 (364)
T 3p9c_A 190 KKLLELYHGFEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQ---------FPGVTHVGGDMFK-EVP 258 (364)
T ss_dssp HHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC---------CTTEEEEECCTTT-CCC
T ss_pred HHHHHhcccccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhh---------cCCeEEEeCCcCC-CCC
Confidence 44555554 55678999999999999999999988889999999 888877664 3689999999987 766
Q ss_pred CCcceEEEecccccCCCCHH--HHHHHHHhhccCCcEEEEEEEccCCCCcchhh--hHHHHHhhhhcccccccccccCCH
Q 018003 246 SSSIDAVHAGAAIHCWSSPS--TGVAEISRVLRPGGVFVGTTYIVDGPFNLIPF--SRLLRQVCFLDLKIVGFSIPVLGF 321 (362)
Q Consensus 246 ~~~fD~V~~~~vl~h~~d~~--~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~s~ 321 (362)
.+ |+|++.+++||++++. .+|++++++|||||++++.+...+........ .......... .... .....+.
T Consensus 259 ~~--D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m~--~~~~-~g~~rt~ 333 (364)
T 3p9c_A 259 SG--DTILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCILPVNPEANPSSQGVFHVDMIML--AHNP-GGRERYE 333 (364)
T ss_dssp CC--SEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSCCSSHHHHHHHHHHHHHH--HHCS-SCCCCBH
T ss_pred CC--CEEEehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCcchhhhhHHHhHHHHH--hccc-CCccCCH
Confidence 54 9999999999998764 88999999999999999998876432111111 1111111110 0111 3456789
Q ss_pred HHHHHHHHHCCCEEEEEEEecee
Q 018003 322 DDLKRIFRQFQLVVNLKLFYGHI 344 (362)
Q Consensus 322 ~~l~~ll~~~Gf~~v~~~~~g~~ 344 (362)
++|+++|+++||+.++.......
T Consensus 334 ~e~~~ll~~AGF~~v~~~~~~~~ 356 (364)
T 3p9c_A 334 REFQALARGAGFTGVKSTYIYAN 356 (364)
T ss_dssp HHHHHHHHHTTCCEEEEEEEETT
T ss_pred HHHHHHHHHCCCceEEEEEcCCc
Confidence 99999999999999887765443
No 90
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.75 E-value=1.7e-16 Score=137.54 Aligned_cols=137 Identities=15% Similarity=0.023 Sum_probs=114.3
Q ss_pred CcHHHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCC
Q 018003 161 GPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADIS 240 (362)
Q Consensus 161 ~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~ 240 (362)
........+...+...++.+|||+|||+|.++..+++.++..+++|+|+|+.+++.|+++++.. ...++.++.+|+.
T Consensus 24 ~~~~i~~~~l~~l~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~---~~~~v~~~~~d~~ 100 (204)
T 3e05_A 24 TKQEVRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKF---VARNVTLVEAFAP 100 (204)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHH---TCTTEEEEECCTT
T ss_pred ChHHHHHHHHHHcCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHh---CCCcEEEEeCChh
Confidence 4455556777788888899999999999999999999987789999999999999999998776 1368999999996
Q ss_pred CCCCCCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhcccccccccccCC
Q 018003 241 RLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVGFSIPVLG 320 (362)
Q Consensus 241 ~~p~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 320 (362)
......++||+|++..+++ ++..+++++.++|||||++++.++.. -+
T Consensus 101 ~~~~~~~~~D~i~~~~~~~---~~~~~l~~~~~~LkpgG~l~~~~~~~------------------------------~~ 147 (204)
T 3e05_A 101 EGLDDLPDPDRVFIGGSGG---MLEEIIDAVDRRLKSEGVIVLNAVTL------------------------------DT 147 (204)
T ss_dssp TTCTTSCCCSEEEESCCTT---CHHHHHHHHHHHCCTTCEEEEEECBH------------------------------HH
T ss_pred hhhhcCCCCCEEEECCCCc---CHHHHHHHHHHhcCCCeEEEEEeccc------------------------------cc
Confidence 6543447899999998775 78899999999999999999876532 12
Q ss_pred HHHHHHHHHHCCC
Q 018003 321 FDDLKRIFRQFQL 333 (362)
Q Consensus 321 ~~~l~~ll~~~Gf 333 (362)
.+.+.++++++||
T Consensus 148 ~~~~~~~l~~~g~ 160 (204)
T 3e05_A 148 LTKAVEFLEDHGY 160 (204)
T ss_dssp HHHHHHHHHHTTC
T ss_pred HHHHHHHHHHCCC
Confidence 3467889999998
No 91
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.75 E-value=2.8e-17 Score=150.09 Aligned_cols=137 Identities=15% Similarity=0.109 Sum_probs=112.0
Q ss_pred CCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCCCCcceEEEec
Q 018003 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAG 255 (362)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~~~~fD~V~~~ 255 (362)
.++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.+++++... ..++.++++|+..+++ +++||+|++.
T Consensus 119 ~~~~~vLD~GcG~G~~~~~l~~~g~--~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~~~d~~~~~~-~~~fD~i~~~ 191 (286)
T 3m70_A 119 ISPCKVLDLGCGQGRNSLYLSLLGY--DVTSWDHNENSIAFLNETKEKE----NLNISTALYDINAANI-QENYDFIVST 191 (286)
T ss_dssp SCSCEEEEESCTTCHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT----TCCEEEEECCGGGCCC-CSCEEEEEEC
T ss_pred cCCCcEEEECCCCCHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHHHc----CCceEEEEeccccccc-cCCccEEEEc
Confidence 3578999999999999999999875 9999999999999999998876 3389999999998876 7889999999
Q ss_pred ccccCCCCH--HHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhcccccccccccCCHHHHHHHHHHCCC
Q 018003 256 AAIHCWSSP--STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVGFSIPVLGFDDLKRIFRQFQL 333 (362)
Q Consensus 256 ~vl~h~~d~--~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~~Gf 333 (362)
.+++|++++ ..+++++.++|||||.+++.......... .+......++..++.++++. |
T Consensus 192 ~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~-----------------~~~~~~~~~~~~~l~~~~~~--~ 252 (286)
T 3m70_A 192 VVFMFLNRERVPSIIKNMKEHTNVGGYNLIVAAMSTDDVP-----------------CPLPFSFTFAENELKEYYKD--W 252 (286)
T ss_dssp SSGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSC-----------------CSSCCSCCBCTTHHHHHTTT--S
T ss_pred cchhhCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCCCC-----------------CCCCccccCCHHHHHHHhcC--C
Confidence 999999655 48999999999999998887765432111 01113456888899999865 7
Q ss_pred EEEEE
Q 018003 334 VVNLK 338 (362)
Q Consensus 334 ~~v~~ 338 (362)
+++..
T Consensus 253 ~~~~~ 257 (286)
T 3m70_A 253 EFLEY 257 (286)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 66554
No 92
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.73 E-value=1.2e-17 Score=146.46 Aligned_cols=158 Identities=18% Similarity=0.178 Sum_probs=110.0
Q ss_pred hcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhc-CCCCCCCEEEEEecCCCCCCCCCcce
Q 018003 172 YLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE-SNFPKENFLLVRADISRLPFASSSID 250 (362)
Q Consensus 172 ~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~-~~~~~~~~~~~~~d~~~~p~~~~~fD 250 (362)
.+...++.+|||+|||+|.++..+++.++..+|+|+|+|+.|++.+.++.+.. ......++.++++|+..+|+.+++ |
T Consensus 22 ~l~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~-d 100 (218)
T 3mq2_A 22 QLRSQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLSGV-G 100 (218)
T ss_dssp HHHTTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCCCE-E
T ss_pred HhhccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCCCC-C
Confidence 33455688999999999999999999977789999999999888644333210 001245899999999999987766 7
Q ss_pred EEEe---cccc--cCCCCHHHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhcccccccccccCCHHHHH
Q 018003 251 AVHA---GAAI--HCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVGFSIPVLGFDDLK 325 (362)
Q Consensus 251 ~V~~---~~vl--~h~~d~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~ 325 (362)
.|.. +..+ +|++++..+++++.++|||||++++........ ...+ ... ..+. ....+..+.+.
T Consensus 101 ~v~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~-~~~~---~~~-------~~~~-~~~~~~~~~l~ 168 (218)
T 3mq2_A 101 ELHVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALNLHAWR-PSVP---EVG-------EHPE-PTPDSADEWLA 168 (218)
T ss_dssp EEEEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEEGGGBT-TBCG---GGT-------TCCC-CCHHHHHHHHH
T ss_pred EEEEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEecccccc-cccc---ccc-------cCCc-cchHHHHHHHH
Confidence 6663 2333 388899999999999999999999966543211 1111 000 0000 11112344588
Q ss_pred HHHHHCCCEEEEEEEec
Q 018003 326 RIFRQFQLVVNLKLFYG 342 (362)
Q Consensus 326 ~ll~~~Gf~~v~~~~~g 342 (362)
.+++++||++.+.....
T Consensus 169 ~~l~~aGf~i~~~~~~~ 185 (218)
T 3mq2_A 169 PRYAEAGWKLADCRYLE 185 (218)
T ss_dssp HHHHHTTEEEEEEEEEC
T ss_pred HHHHHcCCCceeeeccc
Confidence 89999999988776543
No 93
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.73 E-value=2.5e-17 Score=148.51 Aligned_cols=161 Identities=23% Similarity=0.255 Sum_probs=115.1
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCCC
Q 018003 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 246 (362)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~~ 246 (362)
+.+...+. ++.+|||+|||+|.++..+++.+. +++|+|+|+.+++.|+++.. . .++++|+..+++++
T Consensus 46 ~~l~~~~~--~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~~~~~--------~-~~~~~d~~~~~~~~ 112 (260)
T 2avn_A 46 SFLEEYLK--NPCRVLDLGGGTGKWSLFLQERGF--EVVLVDPSKEMLEVAREKGV--------K-NVVEAKAEDLPFPS 112 (260)
T ss_dssp HHHHHHCC--SCCEEEEETCTTCHHHHHHHTTTC--EEEEEESCHHHHHHHHHHTC--------S-CEEECCTTSCCSCT
T ss_pred HHHHHhcC--CCCeEEEeCCCcCHHHHHHHHcCC--eEEEEeCCHHHHHHHHhhcC--------C-CEEECcHHHCCCCC
Confidence 34444444 578999999999999999998865 99999999999999998732 1 28899999999888
Q ss_pred CcceEEEecccccCC-CCHHHHHHHHHhhccCCcEEEEEEEccCCCCcc---hhhhHHHHHhhhhccccc-----ccccc
Q 018003 247 SSIDAVHAGAAIHCW-SSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNL---IPFSRLLRQVCFLDLKIV-----GFSIP 317 (362)
Q Consensus 247 ~~fD~V~~~~vl~h~-~d~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~-----~~~~~ 317 (362)
++||+|++..+++|+ +++..+++++.++|||||.+++.+++....... ...+.............. .....
T Consensus 113 ~~fD~v~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (260)
T 2avn_A 113 GAFEAVLALGDVLSYVENKDKAFSEIRRVLVPDGLLIATVDNFYTFLQQMIEKDAWDQITRFLKTQTTSVGTTLFSFNSY 192 (260)
T ss_dssp TCEEEEEECSSHHHHCSCHHHHHHHHHHHEEEEEEEEEEEEBHHHHHHHHHHTTCHHHHHHHHHHCEEEEECSSEEEEEE
T ss_pred CCEEEEEEcchhhhccccHHHHHHHHHHHcCCCeEEEEEeCChHHHHHHhhcchhHHHHHHHHhccccccCCCceeEEEe
Confidence 999999999877776 789999999999999999999999875210000 000000000010000000 00123
Q ss_pred cCCHHHHHHHHHHCCCEEEEEEEece
Q 018003 318 VLGFDDLKRIFRQFQLVVNLKLFYGH 343 (362)
Q Consensus 318 ~~s~~~l~~ll~~~Gf~~v~~~~~g~ 343 (362)
+++.+++.++ +||++++......
T Consensus 193 ~~~~~~l~~l---aGf~~~~~~~~~~ 215 (260)
T 2avn_A 193 AFKPEDLDSL---EGFETVDIRGIGV 215 (260)
T ss_dssp CBCGGGGSSC---TTEEEEEEEEECS
T ss_pred ccCHHHHHHh---cCceEEEEECCCC
Confidence 7899999888 9999887765443
No 94
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.72 E-value=6.4e-17 Score=152.35 Aligned_cols=149 Identities=14% Similarity=0.127 Sum_probs=114.7
Q ss_pred CCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCCCCcceEEEec
Q 018003 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAG 255 (362)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~~~~fD~V~~~ 255 (362)
.++.+|||||||+|.++..+++..+..+++++|+ +.+++.|++ ..++.++.+|+.. +++ .||+|++.
T Consensus 187 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~---------~~~v~~~~~d~~~-~~p--~~D~v~~~ 253 (352)
T 1fp2_A 187 DGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSG---------SNNLTYVGGDMFT-SIP--NADAVLLK 253 (352)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC---------BTTEEEEECCTTT-CCC--CCSEEEEE
T ss_pred ccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhccc---------CCCcEEEeccccC-CCC--CccEEEee
Confidence 3467999999999999999999988789999999 999888765 2469999999966 554 39999999
Q ss_pred ccccCCCCHH--HHHHHHHhhccC---CcEEEEEEEccCCCCcch--hhhHHHHHhhhhcccccccccccCCHHHHHHHH
Q 018003 256 AAIHCWSSPS--TGVAEISRVLRP---GGVFVGTTYIVDGPFNLI--PFSRLLRQVCFLDLKIVGFSIPVLGFDDLKRIF 328 (362)
Q Consensus 256 ~vl~h~~d~~--~~l~~i~r~Lkp---gG~li~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll 328 (362)
+++||++|+. .+|++++++||| ||++++.++......... ........... ... ....++.++|++++
T Consensus 254 ~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~---~~~--~g~~~t~~e~~~ll 328 (352)
T 1fp2_A 254 YILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNM---ACL--NGKERNEEEWKKLF 328 (352)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEECTTTSCHHHHHHHHHHHHHG---GGG--TCCCEEHHHHHHHH
T ss_pred hhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeecCCCCCccchhhhHhhccHHH---Hhc--cCCCCCHHHHHHHH
Confidence 9999999988 999999999999 999999987754321110 11111222111 011 13456899999999
Q ss_pred HHCCCEEEEEEEec
Q 018003 329 RQFQLVVNLKLFYG 342 (362)
Q Consensus 329 ~~~Gf~~v~~~~~g 342 (362)
+++||+.++....+
T Consensus 329 ~~aGf~~~~~~~~~ 342 (352)
T 1fp2_A 329 IEAGFQHYKISPLT 342 (352)
T ss_dssp HHTTCCEEEEEEEE
T ss_pred HHCCCCeeEEEecC
Confidence 99999988776543
No 95
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.72 E-value=1.9e-18 Score=153.68 Aligned_cols=104 Identities=10% Similarity=0.215 Sum_probs=89.9
Q ss_pred CCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCC--CCCCCcceEEE
Q 018003 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL--PFASSSIDAVH 253 (362)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~--p~~~~~fD~V~ 253 (362)
.+|++|||||||+|..+..+++..+ .+++|+|+|+.+++.|+++.... ..++.++.+|+..+ ++++++||.|+
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~~-~~v~~id~~~~~~~~a~~~~~~~----~~~~~~~~~~a~~~~~~~~~~~FD~i~ 133 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAPI-DEHWIIECNDGVFQRLRDWAPRQ----THKVIPLKGLWEDVAPTLPDGHFDGIL 133 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSCE-EEEEEEECCHHHHHHHHHHGGGC----SSEEEEEESCHHHHGGGSCTTCEEEEE
T ss_pred cCCCeEEEECCCccHHHHHHHHhCC-cEEEEEeCCHHHHHHHHHHHhhC----CCceEEEeehHHhhcccccccCCceEE
Confidence 4688999999999999999988754 58999999999999999998776 57888999987653 56788999997
Q ss_pred e-----cccccCCCCHHHHHHHHHhhccCCcEEEEE
Q 018003 254 A-----GAAIHCWSSPSTGVAEISRVLRPGGVFVGT 284 (362)
Q Consensus 254 ~-----~~vl~h~~d~~~~l~~i~r~LkpgG~li~~ 284 (362)
. ..+++|++++..+++++.|+|||||+|++.
T Consensus 134 ~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 134 YDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp ECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred EeeeecccchhhhcchhhhhhhhhheeCCCCEEEEE
Confidence 4 566788899999999999999999999864
No 96
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.71 E-value=1.6e-16 Score=140.55 Aligned_cols=142 Identities=11% Similarity=0.075 Sum_probs=107.8
Q ss_pred HhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCC----CCCC
Q 018003 170 KGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR----LPFA 245 (362)
Q Consensus 170 ~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~----~p~~ 245 (362)
.+.+...++.+|||+|||+|.++..+++..+..+|+|+|+|+.+++.++++++.. .++.++.+|+.. .++.
T Consensus 67 l~~~~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~-----~~v~~~~~d~~~~~~~~~~~ 141 (230)
T 1fbn_A 67 LKVMPIKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER-----ENIIPILGDANKPQEYANIV 141 (230)
T ss_dssp CCCCCCCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC-----TTEEEEECCTTCGGGGTTTS
T ss_pred ccccCCCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC-----CCeEEEECCCCCcccccccC
Confidence 4445556788999999999999999998853569999999999999999886543 689999999988 6665
Q ss_pred CCcceEEEecccccCCCCH---HHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhcccccccccccCCHH
Q 018003 246 SSSIDAVHAGAAIHCWSSP---STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVGFSIPVLGFD 322 (362)
Q Consensus 246 ~~~fD~V~~~~vl~h~~d~---~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 322 (362)
++||+|+ ++++++ ..+++++.++|||||++++........ ...+ ...+..+
T Consensus 142 -~~~D~v~-----~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~-~~~~-------------------~~~~~~~ 195 (230)
T 1fbn_A 142 -EKVDVIY-----EDVAQPNQAEILIKNAKWFLKKGGYGMIAIKARSID-VTKD-------------------PKEIFKE 195 (230)
T ss_dssp -CCEEEEE-----ECCCSTTHHHHHHHHHHHHEEEEEEEEEEEEGGGTC-SSSC-------------------HHHHHHH
T ss_pred -ccEEEEE-----EecCChhHHHHHHHHHHHhCCCCcEEEEEEecCCCC-CCCC-------------------HHHhhHH
Confidence 7899998 566777 788999999999999999973221100 0000 0012236
Q ss_pred HHHHHHHHCCCEEEEEEEece
Q 018003 323 DLKRIFRQFQLVVNLKLFYGH 343 (362)
Q Consensus 323 ~l~~ll~~~Gf~~v~~~~~g~ 343 (362)
++. +|+++||+.++......
T Consensus 196 ~l~-~l~~~Gf~~~~~~~~~~ 215 (230)
T 1fbn_A 196 QKE-ILEAGGFKIVDEVDIEP 215 (230)
T ss_dssp HHH-HHHHHTEEEEEEEECTT
T ss_pred HHH-HHHHCCCEEEEEEccCC
Confidence 777 88999999888776543
No 97
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.71 E-value=7.2e-17 Score=140.51 Aligned_cols=117 Identities=24% Similarity=0.320 Sum_probs=99.1
Q ss_pred HHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC
Q 018003 164 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP 243 (362)
Q Consensus 164 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p 243 (362)
.....+.+.+ .++.+|||+|||+|.++..+++.++. +++|+|+|+.+++.++++... ..++.++++|+..++
T Consensus 31 ~~~~~l~~~~--~~~~~vLdiGcG~G~~~~~l~~~~~~-~v~~~D~s~~~~~~a~~~~~~-----~~~i~~~~~d~~~~~ 102 (215)
T 2pxx_A 31 SFRALLEPEL--RPEDRILVLGCGNSALSYELFLGGFP-NVTSVDYSSVVVAAMQACYAH-----VPQLRWETMDVRKLD 102 (215)
T ss_dssp HHHHHHGGGC--CTTCCEEEETCTTCSHHHHHHHTTCC-CEEEEESCHHHHHHHHHHTTT-----CTTCEEEECCTTSCC
T ss_pred HHHHHHHHhc--CCCCeEEEECCCCcHHHHHHHHcCCC-cEEEEeCCHHHHHHHHHhccc-----CCCcEEEEcchhcCC
Confidence 3445555555 34789999999999999999998753 899999999999999998654 258999999999988
Q ss_pred CCCCcceEEEecccccCCC---------------CHHHHHHHHHhhccCCcEEEEEEEcc
Q 018003 244 FASSSIDAVHAGAAIHCWS---------------SPSTGVAEISRVLRPGGVFVGTTYIV 288 (362)
Q Consensus 244 ~~~~~fD~V~~~~vl~h~~---------------d~~~~l~~i~r~LkpgG~li~~~~~~ 288 (362)
+++++||+|++..+++|+. ++..+++++.++|||||++++.++..
T Consensus 103 ~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 162 (215)
T 2pxx_A 103 FPSASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAA 162 (215)
T ss_dssp SCSSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred CCCCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCC
Confidence 8889999999999987765 56799999999999999999988753
No 98
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.71 E-value=2.3e-16 Score=136.85 Aligned_cols=139 Identities=14% Similarity=0.124 Sum_probs=114.9
Q ss_pred CCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCCCCcceEEEec
Q 018003 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAG 255 (362)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~~~~fD~V~~~ 255 (362)
.++.+|||+|||+|.++..+++.+ ..+++|+|+++.+++.|++++... ...++.++++|+...+ +++||+|+++
T Consensus 59 ~~~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~---~~~~v~~~~~d~~~~~--~~~fD~i~~~ 132 (205)
T 3grz_A 59 VKPLTVADVGTGSGILAIAAHKLG-AKSVLATDISDESMTAAEENAALN---GIYDIALQKTSLLADV--DGKFDLIVAN 132 (205)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHT---TCCCCEEEESSTTTTC--CSCEEEEEEE
T ss_pred cCCCEEEEECCCCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHc---CCCceEEEeccccccC--CCCceEEEEC
Confidence 357899999999999999988864 469999999999999999998765 1234999999997653 5789999999
Q ss_pred ccccCCCCHHHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhcccccccccccCCHHHHHHHHHHCCCEE
Q 018003 256 AAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVGFSIPVLGFDDLKRIFRQFQLVV 335 (362)
Q Consensus 256 ~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~~Gf~~ 335 (362)
.++++ ...+++++.++|||||++++.++... +.+.+.++++++||+.
T Consensus 133 ~~~~~---~~~~l~~~~~~L~~gG~l~~~~~~~~------------------------------~~~~~~~~~~~~Gf~~ 179 (205)
T 3grz_A 133 ILAEI---LLDLIPQLDSHLNEDGQVIFSGIDYL------------------------------QLPKIEQALAENSFQI 179 (205)
T ss_dssp SCHHH---HHHHGGGSGGGEEEEEEEEEEEEEGG------------------------------GHHHHHHHHHHTTEEE
T ss_pred CcHHH---HHHHHHHHHHhcCCCCEEEEEecCcc------------------------------cHHHHHHHHHHcCCce
Confidence 88876 47889999999999999999765421 3557889999999999
Q ss_pred EEEEEeceeEEEEeeCcc
Q 018003 336 NLKLFYGHIQHYIVKIPS 353 (362)
Q Consensus 336 v~~~~~g~~~~~~~~kp~ 353 (362)
++....+.+..++.++|.
T Consensus 180 ~~~~~~~~w~~~~~~~~~ 197 (205)
T 3grz_A 180 DLKMRAGRWIGLAISRKH 197 (205)
T ss_dssp EEEEEETTEEEEEEEECC
T ss_pred EEeeccCCEEEEEEeccc
Confidence 998888887666666653
No 99
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.70 E-value=1.3e-16 Score=140.82 Aligned_cols=123 Identities=14% Similarity=0.197 Sum_probs=102.5
Q ss_pred CCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecC-CCCCCC-CCcceEEE
Q 018003 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADI-SRLPFA-SSSIDAVH 253 (362)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~-~~~p~~-~~~fD~V~ 253 (362)
.++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.++++ ..++.++++|+ ..+|++ +++||+|+
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~--------~~~~~~~~~d~~~~~~~~~~~~fD~v~ 116 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQAA--RWAAYDFSPELLKLARAN--------APHADVYEWNGKGELPAGLGAPFGLIV 116 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGSS--EEEEEESCHHHHHHHHHH--------CTTSEEEECCSCSSCCTTCCCCEEEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHh--------CCCceEEEcchhhccCCcCCCCEEEEE
Confidence 3578999999999999999999864 999999999999999987 36799999999 678887 88999999
Q ss_pred ecccccCCCCHHHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhcccccccccccCCHHHHHHHHHHCCC
Q 018003 254 AGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVGFSIPVLGFDDLKRIFRQFQL 333 (362)
Q Consensus 254 ~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~~Gf 333 (362)
+. .++..+++++.++|||||+++ . .....+...+.++++++||
T Consensus 117 ~~------~~~~~~l~~~~~~LkpgG~l~--~-----------------------------~~~~~~~~~~~~~l~~~Gf 159 (226)
T 3m33_A 117 SR------RGPTSVILRLPELAAPDAHFL--Y-----------------------------VGPRLNVPEVPERLAAVGW 159 (226)
T ss_dssp EE------SCCSGGGGGHHHHEEEEEEEE--E-----------------------------EESSSCCTHHHHHHHHTTC
T ss_pred eC------CCHHHHHHHHHHHcCCCcEEE--E-----------------------------eCCcCCHHHHHHHHHHCCC
Confidence 87 477888999999999999999 1 1223455678999999999
Q ss_pred EEEEEEEeceeE
Q 018003 334 VVNLKLFYGHIQ 345 (362)
Q Consensus 334 ~~v~~~~~g~~~ 345 (362)
..+.........
T Consensus 160 ~~~~~~~~~~~~ 171 (226)
T 3m33_A 160 DIVAEDHVSVLA 171 (226)
T ss_dssp EEEEEEEEEEEE
T ss_pred eEEEEEeeeecc
Confidence 887766544433
No 100
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.70 E-value=2e-16 Score=143.50 Aligned_cols=108 Identities=10% Similarity=0.043 Sum_probs=91.3
Q ss_pred hhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCCCCcce
Q 018003 171 GYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSID 250 (362)
Q Consensus 171 ~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~~~~fD 250 (362)
..+...++.+|||||||+|.++..+..+.++++|+|+|++++|++.|+++++.. + ..++.++++|+..+| +++||
T Consensus 116 ~la~l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~--g-l~~v~~v~gDa~~l~--d~~FD 190 (298)
T 3fpf_A 116 ALGRFRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGL--G-VDGVNVITGDETVID--GLEFD 190 (298)
T ss_dssp HHTTCCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHH--T-CCSEEEEESCGGGGG--GCCCS
T ss_pred HHcCCCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhc--C-CCCeEEEECchhhCC--CCCcC
Confidence 345677899999999999987755544445679999999999999999998876 1 278999999998876 78999
Q ss_pred EEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEE
Q 018003 251 AVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 286 (362)
Q Consensus 251 ~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~ 286 (362)
+|++... .+++..+++++.++|||||++++...
T Consensus 191 vV~~~a~---~~d~~~~l~el~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 191 VLMVAAL---AEPKRRVFRNIHRYVDTETRIIYRTY 223 (298)
T ss_dssp EEEECTT---CSCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred EEEECCC---ccCHHHHHHHHHHHcCCCcEEEEEcC
Confidence 9998655 57899999999999999999998764
No 101
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.70 E-value=1.8e-17 Score=147.26 Aligned_cols=107 Identities=9% Similarity=0.216 Sum_probs=88.3
Q ss_pred CCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCC--CCCCCcceEE
Q 018003 175 PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL--PFASSSIDAV 252 (362)
Q Consensus 175 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~--p~~~~~fD~V 252 (362)
..++.+|||||||+|.++..+++.+. .+++|+|+|+.|++.|+++.+.. ..++.++++|+.++ ++++++||+|
T Consensus 58 ~~~~~~vLDiGcGtG~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~----~~~v~~~~~d~~~~~~~~~~~~fD~V 132 (236)
T 1zx0_A 58 SSKGGRVLEVGFGMAIAASKVQEAPI-DEHWIIECNDGVFQRLRDWAPRQ----THKVIPLKGLWEDVAPTLPDGHFDGI 132 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHHTSCE-EEEEEEECCHHHHHHHHHHGGGC----SSEEEEEESCHHHHGGGSCTTCEEEE
T ss_pred CCCCCeEEEEeccCCHHHHHHHhcCC-CeEEEEcCCHHHHHHHHHHHHhc----CCCeEEEecCHHHhhcccCCCceEEE
Confidence 34578999999999999999977553 48999999999999999988765 46899999999887 8888999999
Q ss_pred Ee-cccc--c--CCCCHHHHHHHHHhhccCCcEEEEEEE
Q 018003 253 HA-GAAI--H--CWSSPSTGVAEISRVLRPGGVFVGTTY 286 (362)
Q Consensus 253 ~~-~~vl--~--h~~d~~~~l~~i~r~LkpgG~li~~~~ 286 (362)
++ .+.+ + |..++..+++++.++|||||+|++.+.
T Consensus 133 ~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 171 (236)
T 1zx0_A 133 LYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNL 171 (236)
T ss_dssp EECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCH
T ss_pred EECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEec
Confidence 99 5553 1 222344779999999999999997643
No 102
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.70 E-value=1.6e-16 Score=150.02 Aligned_cols=151 Identities=11% Similarity=0.070 Sum_probs=115.6
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCCCCcceEEEecc
Q 018003 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAGA 256 (362)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~~~~fD~V~~~~ 256 (362)
++.+|||||||+|.++..+++..+..+++++|+ +.+++.+++ ..++.++.+|+.. +++ .||+|++.+
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~---------~~~v~~~~~d~~~-~~~--~~D~v~~~~ 259 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG---------NENLNFVGGDMFK-SIP--SADAVLLKW 259 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC---------CSSEEEEECCTTT-CCC--CCSEEEEES
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc---------CCCcEEEeCccCC-CCC--CceEEEEcc
Confidence 467999999999999999999988889999999 788877654 3569999999987 655 499999999
Q ss_pred cccCCCCHH--HHHHHHHhhccC---CcEEEEEEEccCCCCcc--hhhhHHHHHhhhhcccccccccccCCHHHHHHHHH
Q 018003 257 AIHCWSSPS--TGVAEISRVLRP---GGVFVGTTYIVDGPFNL--IPFSRLLRQVCFLDLKIVGFSIPVLGFDDLKRIFR 329 (362)
Q Consensus 257 vl~h~~d~~--~~l~~i~r~Lkp---gG~li~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~ 329 (362)
++||++|+. .+|++++++||| ||++++.++........ ............ .... ....++.++|+++++
T Consensus 260 vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~---~~~~-~g~~~t~~e~~~ll~ 335 (358)
T 1zg3_A 260 VLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVM---LTMF-LGKERTKQEWEKLIY 335 (358)
T ss_dssp CGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEECTTCSCHHHHHHHHHHHHHH---HHHH-SCCCEEHHHHHHHHH
T ss_pred cccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeccCCCCccchhhhHHHhhCHHH---hccC-CCCCCCHHHHHHHHH
Confidence 999999987 999999999999 99999988765432111 011122111111 0011 245679999999999
Q ss_pred HCCCEEEEEEEecee
Q 018003 330 QFQLVVNLKLFYGHI 344 (362)
Q Consensus 330 ~~Gf~~v~~~~~g~~ 344 (362)
++||+.++....+..
T Consensus 336 ~aGf~~~~~~~~~~~ 350 (358)
T 1zg3_A 336 DAGFSSYKITPISGF 350 (358)
T ss_dssp HTTCCEEEEEEETTT
T ss_pred HcCCCeeEEEecCCC
Confidence 999998887765443
No 103
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.70 E-value=7.6e-17 Score=149.31 Aligned_cols=159 Identities=20% Similarity=0.207 Sum_probs=115.4
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCC----CCCCCEEEEEecCCCCC----CC--C
Q 018003 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESN----FPKENFLLVRADISRLP----FA--S 246 (362)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~----~~~~~~~~~~~d~~~~p----~~--~ 246 (362)
++.+|||+|||+|.++..+++.+ ..+++|+|+|+.+++.|+++...... ....++.++++|+..++ ++ +
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 112 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKGR-INKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQ 112 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTT
T ss_pred CCCEEEEECCCCcHHHHHHHhcC-CCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCC
Confidence 57799999999999999988753 46999999999999999998765300 01347899999998876 53 4
Q ss_pred CcceEEEecccccCC-CC---HHHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHh----hhh--------c--
Q 018003 247 SSIDAVHAGAAIHCW-SS---PSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQV----CFL--------D-- 308 (362)
Q Consensus 247 ~~fD~V~~~~vl~h~-~d---~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~----~~~--------~-- 308 (362)
++||+|++..++||+ .+ +..+++++.++|||||.+++.+++.+. +...+... +.. +
T Consensus 113 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~------l~~~~~~~~~~~~~~~~~~~~f~~~~ 186 (313)
T 3bgv_A 113 MCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPNSFE------LIRRLEASETESFGNEIYTVKFQKKG 186 (313)
T ss_dssp CCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEECHHH------HHHHHTTSSSSEEECSSEEEEESCSS
T ss_pred CCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCChHH------HHHHHHhhccCccCCeeEEEEeCCCC
Confidence 589999999999988 44 568999999999999999999986521 00100000 000 0
Q ss_pred ----------ccc---cccccccCCHHHHHHHHHHCCCEEEEEEEec
Q 018003 309 ----------LKI---VGFSIPVLGFDDLKRIFRQFQLVVNLKLFYG 342 (362)
Q Consensus 309 ----------~~~---~~~~~~~~s~~~l~~ll~~~Gf~~v~~~~~g 342 (362)
+.. ........+.+++.++++++||+.+....+.
T Consensus 187 ~~~~~~~~~~f~l~~~~~~~~~~~~~~~~~~l~~~~G~~~v~~~~f~ 233 (313)
T 3bgv_A 187 DYPLFGCKYDFNLEGVVDVPEFLVYFPLLNEMAKKYNMKLVYKKTFL 233 (313)
T ss_dssp CCCSSCCEEEEEEC---CCEEECCCHHHHHHHGGGGTEEEEEEEEHH
T ss_pred CCCCccceEEEEECCcccCcceEEcHHHHHHHHHHcCcEEEEecCHH
Confidence 000 0001234678999999999999999877654
No 104
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.69 E-value=1.8e-15 Score=131.36 Aligned_cols=139 Identities=14% Similarity=0.074 Sum_probs=109.6
Q ss_pred cHHHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCC
Q 018003 162 PEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR 241 (362)
Q Consensus 162 ~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~ 241 (362)
.......+...+...++.+|||+|||+|.++..+++.+ .+|+|+|+++.+++.|+++++.. +...++.++.+|+..
T Consensus 40 ~~~~~~~~l~~l~~~~~~~vLDlGcG~G~~~~~la~~~--~~v~~vD~s~~~~~~a~~~~~~~--g~~~~v~~~~~d~~~ 115 (204)
T 3njr_A 40 KSPMRALTLAALAPRRGELLWDIGGGSGSVSVEWCLAG--GRAITIEPRADRIENIQKNIDTY--GLSPRMRAVQGTAPA 115 (204)
T ss_dssp CHHHHHHHHHHHCCCTTCEEEEETCTTCHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHT--TCTTTEEEEESCTTG
T ss_pred cHHHHHHHHHhcCCCCCCEEEEecCCCCHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHHHHc--CCCCCEEEEeCchhh
Confidence 34444567777777888999999999999999999884 59999999999999999988765 112379999999987
Q ss_pred CCCCCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhcccccccccccCCH
Q 018003 242 LPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVGFSIPVLGF 321 (362)
Q Consensus 242 ~p~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 321 (362)
.......||+|++..++ ++. +++++.++|||||++++.....+ +.
T Consensus 116 ~~~~~~~~D~v~~~~~~----~~~-~l~~~~~~LkpgG~lv~~~~~~~------------------------------~~ 160 (204)
T 3njr_A 116 ALADLPLPEAVFIGGGG----SQA-LYDRLWEWLAPGTRIVANAVTLE------------------------------SE 160 (204)
T ss_dssp GGTTSCCCSEEEECSCC----CHH-HHHHHHHHSCTTCEEEEEECSHH------------------------------HH
T ss_pred hcccCCCCCEEEECCcc----cHH-HHHHHHHhcCCCcEEEEEecCcc------------------------------cH
Confidence 43334579999987754 566 99999999999999998875421 23
Q ss_pred HHHHHHHHHCCCEEEEEE
Q 018003 322 DDLKRIFRQFQLVVNLKL 339 (362)
Q Consensus 322 ~~l~~ll~~~Gf~~v~~~ 339 (362)
..+.+++++.|+++....
T Consensus 161 ~~~~~~l~~~g~~i~~i~ 178 (204)
T 3njr_A 161 TLLTQLHARHGGQLLRID 178 (204)
T ss_dssp HHHHHHHHHHCSEEEEEE
T ss_pred HHHHHHHHhCCCcEEEEE
Confidence 467788889998765543
No 105
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.69 E-value=5.6e-16 Score=130.90 Aligned_cols=118 Identities=17% Similarity=0.156 Sum_probs=95.4
Q ss_pred HHHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCC-
Q 018003 163 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR- 241 (362)
Q Consensus 163 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~- 241 (362)
......+.+.+...++.+|||+|||+|.++..+++..+..+++|+|+++.+++.|++++... +...++ ++.+|...
T Consensus 11 ~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--~~~~~~-~~~~d~~~~ 87 (178)
T 3hm2_A 11 QHVRALAISALAPKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINL--GVSDRI-AVQQGAPRA 87 (178)
T ss_dssp HHHHHHHHHHHCCCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTT--TCTTSE-EEECCTTGG
T ss_pred HHHHHHHHHHhcccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHh--CCCCCE-EEecchHhh
Confidence 33445666777777888999999999999999999866679999999999999999988765 122378 88888744
Q ss_pred CCCCCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEc
Q 018003 242 LPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 287 (362)
Q Consensus 242 ~p~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~ 287 (362)
++...++||+|++..+++| ..+++++.++|||||++++.+..
T Consensus 88 ~~~~~~~~D~i~~~~~~~~----~~~l~~~~~~L~~gG~l~~~~~~ 129 (178)
T 3hm2_A 88 FDDVPDNPDVIFIGGGLTA----PGVFAAAWKRLPVGGRLVANAVT 129 (178)
T ss_dssp GGGCCSCCSEEEECC-TTC----TTHHHHHHHTCCTTCEEEEEECS
T ss_pred hhccCCCCCEEEECCcccH----HHHHHHHHHhcCCCCEEEEEeec
Confidence 3332378999999999988 67899999999999999988754
No 106
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.68 E-value=5e-16 Score=136.66 Aligned_cols=144 Identities=13% Similarity=0.121 Sum_probs=109.7
Q ss_pred hcCCCCCCeEEEEcCccchHHHHHHHh-CCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCC---CCCCCC
Q 018003 172 YLKPVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR---LPFASS 247 (362)
Q Consensus 172 ~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~---~p~~~~ 247 (362)
.+..+||.+|||+|||+|.++..+++. |+.+.|+|+|++++|++.+++++++. .++..+.+|... .++..+
T Consensus 72 ~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~-----~ni~~V~~d~~~p~~~~~~~~ 146 (233)
T 4df3_A 72 ELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDR-----RNIFPILGDARFPEKYRHLVE 146 (233)
T ss_dssp CCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTC-----TTEEEEESCTTCGGGGTTTCC
T ss_pred hcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhh-----cCeeEEEEeccCccccccccc
Confidence 456788999999999999999999987 78889999999999999999887664 689999998865 345678
Q ss_pred cceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhcccccccccccCCHHHHHHH
Q 018003 248 SIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVGFSIPVLGFDDLKRI 327 (362)
Q Consensus 248 ~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~l 327 (362)
++|+|++. +.|..++..++.++.+.|||||+++++...... .. .... . .. .+...+.
T Consensus 147 ~vDvVf~d--~~~~~~~~~~l~~~~r~LKpGG~lvI~ik~r~~-----d~------------~~p~-~-~~--~~~ev~~ 203 (233)
T 4df3_A 147 GVDGLYAD--VAQPEQAAIVVRNARFFLRDGGYMLMAIKARSI-----DV------------TTEP-S-EV--YKREIKT 203 (233)
T ss_dssp CEEEEEEC--CCCTTHHHHHHHHHHHHEEEEEEEEEEEECCHH-----HH------------HTCC-C-HH--HHHHHHH
T ss_pred eEEEEEEe--ccCChhHHHHHHHHHHhccCCCEEEEEEecccC-----CC------------CCCh-H-HH--HHHHHHH
Confidence 89999863 455567889999999999999999987643210 00 0000 0 00 1234567
Q ss_pred HHHCCCEEEEEEEece
Q 018003 328 FRQFQLVVNLKLFYGH 343 (362)
Q Consensus 328 l~~~Gf~~v~~~~~g~ 343 (362)
|+++||+.++......
T Consensus 204 L~~~GF~l~e~i~L~p 219 (233)
T 4df3_A 204 LMDGGLEIKDVVHLDP 219 (233)
T ss_dssp HHHTTCCEEEEEECTT
T ss_pred HHHCCCEEEEEEccCC
Confidence 8899999988876543
No 107
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.68 E-value=9.4e-16 Score=134.01 Aligned_cols=107 Identities=20% Similarity=0.135 Sum_probs=91.4
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC--CCCCcceEEEe
Q 018003 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP--FASSSIDAVHA 254 (362)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p--~~~~~fD~V~~ 254 (362)
++.+|||+|||+|.++..+++..+..+++|+|+++.+++.|++++... ...++.++++|+..++ +++++||+|++
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~---~~~~v~~~~~d~~~~~~~~~~~~~D~i~~ 117 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEV---GVPNIKLLWVDGSDLTDYFEDGEIDRLYL 117 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHH---CCSSEEEEECCSSCGGGTSCTTCCSEEEE
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHc---CCCCEEEEeCCHHHHHhhcCCCCCCEEEE
Confidence 467999999999999999999987789999999999999999998776 1368999999999877 77889999999
Q ss_pred cccccCCC--------CHHHHHHHHHhhccCCcEEEEEEE
Q 018003 255 GAAIHCWS--------SPSTGVAEISRVLRPGGVFVGTTY 286 (362)
Q Consensus 255 ~~vl~h~~--------d~~~~l~~i~r~LkpgG~li~~~~ 286 (362)
+....+.. ....+++++.++|||||.+++.+.
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 157 (214)
T 1yzh_A 118 NFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTD 157 (214)
T ss_dssp ESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEES
T ss_pred ECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeC
Confidence 86543322 125799999999999999999764
No 108
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.68 E-value=1.6e-16 Score=140.14 Aligned_cols=155 Identities=14% Similarity=0.057 Sum_probs=100.9
Q ss_pred CCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCC-HHHHHHH---HHHHhhcCCCCCCCEEEEEecCCCCCCC-CCcce
Q 018003 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYS-ENMLKQC---YEFVQQESNFPKENFLLVRADISRLPFA-SSSID 250 (362)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s-~~~~~~a---~~~~~~~~~~~~~~~~~~~~d~~~~p~~-~~~fD 250 (362)
.++.+|||||||+|.++..+++..++.+|+|+|+| +.|++.| ++++... ...++.++++|++.+|.. .+.+|
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~---~~~~v~~~~~d~~~l~~~~~d~v~ 99 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKG---GLSNVVFVIAAAESLPFELKNIAD 99 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGT---CCSSEEEECCBTTBCCGGGTTCEE
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHc---CCCCeEEEEcCHHHhhhhccCeEE
Confidence 35779999999999999999977777799999999 7777776 6655443 246899999999988632 14455
Q ss_pred EEEeccccc----C-CCCHHHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhcccccccccccCCHHHHH
Q 018003 251 AVHAGAAIH----C-WSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVGFSIPVLGFDDLK 325 (362)
Q Consensus 251 ~V~~~~vl~----h-~~d~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~ 325 (362)
.|.++.... | ..++..++++++|+|||||++++.+...+.. ...++. .. ... . . ...++..+++.
T Consensus 100 ~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~~~~~~~-~~~~~~--~~-~~~----~-~-~~~~~~~~el~ 169 (225)
T 3p2e_A 100 SISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVTTYSDSY-EEAEIK--KR-GLP----L-L-SKAYFLSEQYK 169 (225)
T ss_dssp EEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEECCCC-----------------------C-CHHHHHSHHHH
T ss_pred EEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEEeccccc-hhchhh--hc-CCC----C-C-ChhhcchHHHH
Confidence 555443211 1 1244578999999999999999955433221 111100 00 000 0 0 11122233599
Q ss_pred HHHHHCCCEEEEEEEece
Q 018003 326 RIFRQFQLVVNLKLFYGH 343 (362)
Q Consensus 326 ~ll~~~Gf~~v~~~~~g~ 343 (362)
.+++++||++.....++.
T Consensus 170 ~~l~~aGf~v~~~~~~~~ 187 (225)
T 3p2e_A 170 AELSNSGFRIDDVKELDN 187 (225)
T ss_dssp HHHHHHTCEEEEEEEECH
T ss_pred HHHHHcCCCeeeeeecCH
Confidence 999999999888776653
No 109
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.67 E-value=1.8e-15 Score=129.20 Aligned_cols=119 Identities=14% Similarity=0.164 Sum_probs=100.6
Q ss_pred HHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCC--EEEEEecCCC
Q 018003 164 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKEN--FLLVRADISR 241 (362)
Q Consensus 164 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~--~~~~~~d~~~ 241 (362)
...+.+.+.+...++.+|||+|||+|.++..+++.+ .+++|+|+++.+++.+++++... ...+ +.++.+|+..
T Consensus 39 ~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~~--~~v~~~D~~~~~~~~a~~~~~~~---~~~~~~~~~~~~d~~~ 113 (194)
T 1dus_A 39 KGTKILVENVVVDKDDDILDLGCGYGVIGIALADEV--KSTTMADINRRAIKLAKENIKLN---NLDNYDIRVVHSDLYE 113 (194)
T ss_dssp HHHHHHHHHCCCCTTCEEEEETCTTSHHHHHHGGGS--SEEEEEESCHHHHHHHHHHHHHT---TCTTSCEEEEECSTTT
T ss_pred hHHHHHHHHcccCCCCeEEEeCCCCCHHHHHHHHcC--CeEEEEECCHHHHHHHHHHHHHc---CCCccceEEEECchhc
Confidence 455777788877788999999999999999998884 59999999999999999988765 1233 9999999977
Q ss_pred CCCCCCcceEEEecccccC-CCCHHHHHHHHHhhccCCcEEEEEEEcc
Q 018003 242 LPFASSSIDAVHAGAAIHC-WSSPSTGVAEISRVLRPGGVFVGTTYIV 288 (362)
Q Consensus 242 ~p~~~~~fD~V~~~~vl~h-~~d~~~~l~~i~r~LkpgG~li~~~~~~ 288 (362)
. +++++||+|++..+++| ..+...+++++.++|||||.+++.++..
T Consensus 114 ~-~~~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 160 (194)
T 1dus_A 114 N-VKDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQTK 160 (194)
T ss_dssp T-CTTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEEST
T ss_pred c-cccCCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEECCC
Confidence 3 45678999999998887 3456789999999999999999998763
No 110
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.67 E-value=7.3e-16 Score=138.17 Aligned_cols=158 Identities=14% Similarity=0.054 Sum_probs=112.5
Q ss_pred HHHhhcCC-CCCCeEEEEcCcc--c-hHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC
Q 018003 168 LMKGYLKP-VLGGNIIDASCGS--G-LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP 243 (362)
Q Consensus 168 ~l~~~l~~-~~~~~vLDiGcG~--G-~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p 243 (362)
+..+++.. ....+|||||||+ + .....+.+..+..+|+++|.|+.|++.|++++... ...++.++++|+.+++
T Consensus 68 rav~~l~~~~g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~---~~~~~~~v~aD~~~~~ 144 (277)
T 3giw_A 68 RAVAHLAKEAGIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLAST---PEGRTAYVEADMLDPA 144 (277)
T ss_dssp HHHHHHHHTSCCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCC---SSSEEEEEECCTTCHH
T ss_pred HHHHHhccccCCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccC---CCCcEEEEEecccChh
Confidence 44444542 2346899999997 3 34444444567789999999999999999988653 1247999999998852
Q ss_pred ------CCCCcce-----EEEecccccCCCC---HHHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhcc
Q 018003 244 ------FASSSID-----AVHAGAAIHCWSS---PSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDL 309 (362)
Q Consensus 244 ------~~~~~fD-----~V~~~~vl~h~~d---~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (362)
...+.|| +|+++.+|||++| |..+++++.+.|+|||+|++++...+.. ......+...+.
T Consensus 145 ~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~d~~---p~~~~~~~~~~~--- 218 (277)
T 3giw_A 145 SILDAPELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTAEFA---PQEVGRVAREYA--- 218 (277)
T ss_dssp HHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECCTTS---HHHHHHHHHHHH---
T ss_pred hhhcccccccccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccCCCC---HHHHHHHHHHHH---
Confidence 1134566 6889999999998 5789999999999999999999876521 111222222221
Q ss_pred cccccccccCCHHHHHHHHHHCCCEEEE
Q 018003 310 KIVGFSIPVLGFDDLKRIFRQFQLVVNL 337 (362)
Q Consensus 310 ~~~~~~~~~~s~~~l~~ll~~~Gf~~v~ 337 (362)
..+....+.+.+++..+|. ||+.++
T Consensus 219 -~~g~p~~~rs~~ei~~~f~--Glelve 243 (277)
T 3giw_A 219 -ARNMPMRLRTHAEAEEFFE--GLELVE 243 (277)
T ss_dssp -HTTCCCCCCCHHHHHHTTT--TSEECT
T ss_pred -hcCCCCccCCHHHHHHHhC--CCcccC
Confidence 1121357789999999994 998643
No 111
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.67 E-value=8.2e-16 Score=134.26 Aligned_cols=126 Identities=15% Similarity=0.200 Sum_probs=103.7
Q ss_pred CCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCCCCcceEEEec
Q 018003 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAG 255 (362)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~~~~fD~V~~~ 255 (362)
.++.+|||+|||+|.++..+. .+++|+|+++. ++.++++|+..+|+++++||+|++.
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l~-----~~v~~~D~s~~------------------~~~~~~~d~~~~~~~~~~fD~v~~~ 122 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSIR-----NPVHCFDLASL------------------DPRVTVCDMAQVPLEDESVDVAVFC 122 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHCC-----SCEEEEESSCS------------------STTEEESCTTSCSCCTTCEEEEEEE
T ss_pred CCCCeEEEECCcCCHHHHHhh-----ccEEEEeCCCC------------------CceEEEeccccCCCCCCCEeEEEEe
Confidence 457899999999999988772 38999999985 3457899999998888999999999
Q ss_pred ccccCCCCHHHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhcccccccccccCCHHHHHHHHHHCCCEE
Q 018003 256 AAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVGFSIPVLGFDDLKRIFRQFQLVV 335 (362)
Q Consensus 256 ~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~~Gf~~ 335 (362)
.++|| .++..+++++.++|||||.+++.++.. .+.+.+++.++++++||++
T Consensus 123 ~~l~~-~~~~~~l~~~~~~L~~gG~l~i~~~~~----------------------------~~~~~~~~~~~l~~~Gf~~ 173 (215)
T 2zfu_A 123 LSLMG-TNIRDFLEEANRVLKPGGLLKVAEVSS----------------------------RFEDVRTFLRAVTKLGFKI 173 (215)
T ss_dssp SCCCS-SCHHHHHHHHHHHEEEEEEEEEEECGG----------------------------GCSCHHHHHHHHHHTTEEE
T ss_pred hhccc-cCHHHHHHHHHHhCCCCeEEEEEEcCC----------------------------CCCCHHHHHHHHHHCCCEE
Confidence 99975 899999999999999999999987531 2237889999999999998
Q ss_pred EEEEEec-eeEEEEeeCcc
Q 018003 336 NLKLFYG-HIQHYIVKIPS 353 (362)
Q Consensus 336 v~~~~~g-~~~~~~~~kp~ 353 (362)
+.....+ ....+..+|..
T Consensus 174 ~~~~~~~~~~~~~~~~k~~ 192 (215)
T 2zfu_A 174 VSKDLTNSHFFLFDFQKTG 192 (215)
T ss_dssp EEEECCSTTCEEEEEEECS
T ss_pred EEEecCCCeEEEEEEEecC
Confidence 8765443 44666666653
No 112
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.66 E-value=1.3e-15 Score=128.32 Aligned_cols=126 Identities=14% Similarity=0.080 Sum_probs=101.6
Q ss_pred CCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCCCCcceEEEec
Q 018003 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAG 255 (362)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~~~~fD~V~~~ 255 (362)
.++.+|||+|||+|.++..+++.+ +++|+|+|+.|++. . .++.++++|+.. ++++++||+|+++
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~~---~v~gvD~s~~~~~~-------~-----~~~~~~~~d~~~-~~~~~~fD~i~~n 85 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKRN---TVVSTDLNIRALES-------H-----RGGNLVRADLLC-SINQESVDVVVFN 85 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTTS---EEEEEESCHHHHHT-------C-----SSSCEEECSTTT-TBCGGGCSEEEEC
T ss_pred CCCCeEEEeccCccHHHHHHHhcC---cEEEEECCHHHHhc-------c-----cCCeEEECChhh-hcccCCCCEEEEC
Confidence 457799999999999999999887 99999999999987 1 468899999987 6667899999999
Q ss_pred ccccCCCCH---------HHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhcccccccccccCCHHHHHH
Q 018003 256 AAIHCWSSP---------STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVGFSIPVLGFDDLKR 326 (362)
Q Consensus 256 ~vl~h~~d~---------~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ 326 (362)
..+++.+++ ..+++++.+.| |||.+++.++.. .+.+++.+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~------------------------------~~~~~l~~ 134 (170)
T 3q87_B 86 PPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEA------------------------------NRPKEVLA 134 (170)
T ss_dssp CCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGG------------------------------GCHHHHHH
T ss_pred CCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEecC------------------------------CCHHHHHH
Confidence 998877665 57899999999 999999887532 23567899
Q ss_pred HHHHCCCEEEEEEE--eceeEEEE
Q 018003 327 IFRQFQLVVNLKLF--YGHIQHYI 348 (362)
Q Consensus 327 ll~~~Gf~~v~~~~--~g~~~~~~ 348 (362)
+++++||+.+.... .+.-..+.
T Consensus 135 ~l~~~gf~~~~~~~~~~~~e~~~~ 158 (170)
T 3q87_B 135 RLEERGYGTRILKVRKILGETVYI 158 (170)
T ss_dssp HHHHTTCEEEEEEEEECSSSEEEE
T ss_pred HHHHCCCcEEEEEeeccCCceEEE
Confidence 99999997655443 34334443
No 113
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.66 E-value=7e-15 Score=129.69 Aligned_cols=131 Identities=13% Similarity=0.065 Sum_probs=102.9
Q ss_pred CCCCCeEEEEcCc-cchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCC-CCCCCcceEE
Q 018003 175 PVLGGNIIDASCG-SGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-PFASSSIDAV 252 (362)
Q Consensus 175 ~~~~~~vLDiGcG-~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~-p~~~~~fD~V 252 (362)
..++.+|||+||| +|.++..+++.. ..+|+|+|+++.+++.|++++... ..++.++++|+..+ ++++++||+|
T Consensus 53 ~~~~~~vLDlG~G~~G~~~~~la~~~-~~~v~~vD~s~~~~~~a~~~~~~~----~~~v~~~~~d~~~~~~~~~~~fD~I 127 (230)
T 3evz_A 53 LRGGEVALEIGTGHTAMMALMAEKFF-NCKVTATEVDEEFFEYARRNIERN----NSNVRLVKSNGGIIKGVVEGTFDVI 127 (230)
T ss_dssp CCSSCEEEEECCTTTCHHHHHHHHHH-CCEEEEEECCHHHHHHHHHHHHHT----TCCCEEEECSSCSSTTTCCSCEEEE
T ss_pred cCCCCEEEEcCCCHHHHHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHh----CCCcEEEeCCchhhhhcccCceeEE
Confidence 3458899999999 999999999883 349999999999999999998876 23899999997543 4556899999
Q ss_pred EecccccCCCC-------------------HHHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhcccccc
Q 018003 253 HAGAAIHCWSS-------------------PSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVG 313 (362)
Q Consensus 253 ~~~~vl~h~~d-------------------~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (362)
+++...++..+ ...+++++.++|||||++++..+...
T Consensus 128 ~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~------------------------ 183 (230)
T 3evz_A 128 FSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKE------------------------ 183 (230)
T ss_dssp EECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCH------------------------
T ss_pred EECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccH------------------------
Confidence 99876655433 46889999999999999999865420
Q ss_pred cccccCCHHHHHHHHHHCCCEEEEEE
Q 018003 314 FSIPVLGFDDLKRIFRQFQLVVNLKL 339 (362)
Q Consensus 314 ~~~~~~s~~~l~~ll~~~Gf~~v~~~ 339 (362)
.....+.+++++.||......
T Consensus 184 -----~~~~~~~~~l~~~g~~~~~~~ 204 (230)
T 3evz_A 184 -----KLLNVIKERGIKLGYSVKDIK 204 (230)
T ss_dssp -----HHHHHHHHHHHHTTCEEEEEE
T ss_pred -----hHHHHHHHHHHHcCCceEEEE
Confidence 123568889999999665543
No 114
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.66 E-value=4.2e-15 Score=129.64 Aligned_cols=106 Identities=17% Similarity=0.138 Sum_probs=83.0
Q ss_pred cCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCC----CCCCCc
Q 018003 173 LKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL----PFASSS 248 (362)
Q Consensus 173 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~----p~~~~~ 248 (362)
+...++.+|||+|||+|.++..+++..+..+|+|+|+|+.|++.+.+..+.. .++.++.+|+... ++. ++
T Consensus 53 ~~~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~-----~~v~~~~~d~~~~~~~~~~~-~~ 126 (210)
T 1nt2_A 53 LKLRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRER-----NNIIPLLFDASKPWKYSGIV-EK 126 (210)
T ss_dssp CCCCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHC-----SSEEEECSCTTCGGGTTTTC-CC
T ss_pred cCCCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcC-----CCeEEEEcCCCCchhhcccc-cc
Confidence 3455788999999999999999988754569999999999887666655443 5788999998763 444 78
Q ss_pred ceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEE
Q 018003 249 IDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 286 (362)
Q Consensus 249 fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~ 286 (362)
||+|++.. .++ .+...+++++.++|||||++++...
T Consensus 127 fD~V~~~~-~~~-~~~~~~l~~~~r~LkpgG~l~i~~~ 162 (210)
T 1nt2_A 127 VDLIYQDI-AQK-NQIEILKANAEFFLKEKGEVVIMVK 162 (210)
T ss_dssp EEEEEECC-CST-THHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eeEEEEec-cCh-hHHHHHHHHHHHHhCCCCEEEEEEe
Confidence 99999873 222 2334569999999999999999854
No 115
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.65 E-value=7.3e-16 Score=137.19 Aligned_cols=130 Identities=15% Similarity=0.016 Sum_probs=104.2
Q ss_pred CCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCC---CCcceEE
Q 018003 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA---SSSIDAV 252 (362)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~---~~~fD~V 252 (362)
.++.+|||+|||+|.++..++...+..+|+|+|+|+.+++.|+++++.. ...++.++++|+.++++. +++||+|
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~---~~~~v~~~~~d~~~~~~~~~~~~~fD~V 145 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEAL---QLENTTFCHDRAETFGQRKDVRESYDIV 145 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHH---TCSSEEEEESCHHHHTTCTTTTTCEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHc---CCCCEEEEeccHHHhcccccccCCccEE
Confidence 3578999999999999999987666679999999999999999988776 134799999999877653 5789999
Q ss_pred EecccccCCCCHHHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhcccccccccccCCHHHHHHHHHHCC
Q 018003 253 HAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVGFSIPVLGFDDLKRIFRQFQ 332 (362)
Q Consensus 253 ~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~~G 332 (362)
++.. +.++..+++++.++|||||.+++..... .. -....+.+.++++|
T Consensus 146 ~~~~----~~~~~~~l~~~~~~LkpgG~l~~~~g~~-----~~-----------------------~~~~~~~~~l~~~g 193 (240)
T 1xdz_A 146 TARA----VARLSVLSELCLPLVKKNGLFVALKAAS-----AE-----------------------EELNAGKKAITTLG 193 (240)
T ss_dssp EEEC----CSCHHHHHHHHGGGEEEEEEEEEEECC------CH-----------------------HHHHHHHHHHHHTT
T ss_pred EEec----cCCHHHHHHHHHHhcCCCCEEEEEeCCC-----ch-----------------------HHHHHHHHHHHHcC
Confidence 9976 4678999999999999999998763110 00 01245778899999
Q ss_pred CEEEEEEE
Q 018003 333 LVVNLKLF 340 (362)
Q Consensus 333 f~~v~~~~ 340 (362)
|+..+...
T Consensus 194 ~~~~~~~~ 201 (240)
T 1xdz_A 194 GELENIHS 201 (240)
T ss_dssp EEEEEEEE
T ss_pred CeEeEEEE
Confidence 98876654
No 116
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.65 E-value=2.8e-15 Score=136.22 Aligned_cols=152 Identities=12% Similarity=0.042 Sum_probs=115.4
Q ss_pred HHHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCC
Q 018003 163 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL 242 (362)
Q Consensus 163 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~ 242 (362)
+...+.+.+.+. .++.+|||+|||+|.++..+++..+..+++|+|+|+.+++.|++++... ...++.++++|+...
T Consensus 96 e~l~~~~l~~~~-~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~---~~~~v~~~~~d~~~~ 171 (276)
T 2b3t_A 96 ECLVEQALARLP-EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHL---AIKNIHILQSDWFSA 171 (276)
T ss_dssp HHHHHHHHHHSC-SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHH---TCCSEEEECCSTTGG
T ss_pred HHHHHHHHHhcc-cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc---CCCceEEEEcchhhh
Confidence 344566666665 4577999999999999999998866779999999999999999998776 124799999999763
Q ss_pred CCCCCcceEEEec-------------ccccCCC------------CHHHHHHHHHhhccCCcEEEEEEEccCCCCcchhh
Q 018003 243 PFASSSIDAVHAG-------------AAIHCWS------------SPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPF 297 (362)
Q Consensus 243 p~~~~~fD~V~~~-------------~vl~h~~------------d~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~ 297 (362)
+++++||+|+++ .+++|.+ +...+++++.++|||||++++...
T Consensus 172 -~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~----------- 239 (276)
T 2b3t_A 172 -LAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHG----------- 239 (276)
T ss_dssp -GTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECC-----------
T ss_pred -cccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEEC-----------
Confidence 446789999998 4555543 346789999999999999998631
Q ss_pred hHHHHHhhhhcccccccccccCCHHHHHHHHHHCCCEEEEEEE--eceeEEEEee
Q 018003 298 SRLLRQVCFLDLKIVGFSIPVLGFDDLKRIFRQFQLVVNLKLF--YGHIQHYIVK 350 (362)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~~Gf~~v~~~~--~g~~~~~~~~ 350 (362)
+.+.+.+.++++++||+.++... .|......++
T Consensus 240 --------------------~~~~~~~~~~l~~~Gf~~v~~~~d~~g~~r~~~~~ 274 (276)
T 2b3t_A 240 --------------------WQQGEAVRQAFILAGYHDVETCRDYGDNERVTLGR 274 (276)
T ss_dssp --------------------SSCHHHHHHHHHHTTCTTCCEEECTTSSEEEEEEE
T ss_pred --------------------chHHHHHHHHHHHCCCcEEEEEecCCCCCcEEEEE
Confidence 13456789999999997654432 3444444443
No 117
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.65 E-value=6.3e-16 Score=130.80 Aligned_cols=117 Identities=17% Similarity=0.119 Sum_probs=96.9
Q ss_pred cCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCC---CCCcc
Q 018003 173 LKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF---ASSSI 249 (362)
Q Consensus 173 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~---~~~~f 249 (362)
++..+|.+|||+|||. +++|+|+.|++.|+++.. .++.+.++|+..+++ ++++|
T Consensus 8 ~g~~~g~~vL~~~~g~----------------v~vD~s~~ml~~a~~~~~-------~~~~~~~~d~~~~~~~~~~~~~f 64 (176)
T 2ld4_A 8 FGISAGQFVAVVWDKS----------------SPVEALKGLVDKLQALTG-------NEGRVSVENIKQLLQSAHKESSF 64 (176)
T ss_dssp TTCCTTSEEEEEECTT----------------SCHHHHHHHHHHHHHHTT-------TTSEEEEEEGGGGGGGCCCSSCE
T ss_pred cCCCCCCEEEEecCCc----------------eeeeCCHHHHHHHHHhcc-------cCcEEEEechhcCccccCCCCCE
Confidence 3456789999999986 239999999999998742 258999999999887 78899
Q ss_pred eEEEecccccCC-CCHHHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhcccccccccccCCHHHHHHHH
Q 018003 250 DAVHAGAAIHCW-SSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVGFSIPVLGFDDLKRIF 328 (362)
Q Consensus 250 D~V~~~~vl~h~-~d~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll 328 (362)
|+|++..++||+ +++..++++++|+|||||++++..+...... . .....+.+++.++|
T Consensus 65 D~V~~~~~l~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~--------------------~-~~~~~~~~~~~~~l 123 (176)
T 2ld4_A 65 DIILSGLVPGSTTLHSAEILAEIARILRPGGCLFLKEPVETAVD--------------------N-NSKVKTASKLCSAL 123 (176)
T ss_dssp EEEEECCSTTCCCCCCHHHHHHHHHHEEEEEEEEEEEEEESSSC--------------------S-SSSSCCHHHHHHHH
T ss_pred eEEEECChhhhcccCHHHHHHHHHHHCCCCEEEEEEcccccccc--------------------c-ccccCCHHHHHHHH
Confidence 999999999999 9999999999999999999999766432110 0 12335789999999
Q ss_pred HHCCC
Q 018003 329 RQFQL 333 (362)
Q Consensus 329 ~~~Gf 333 (362)
+++||
T Consensus 124 ~~aGf 128 (176)
T 2ld4_A 124 TLSGL 128 (176)
T ss_dssp HHTTC
T ss_pred HHCCC
Confidence 99999
No 118
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.65 E-value=1.2e-15 Score=136.98 Aligned_cols=144 Identities=13% Similarity=0.078 Sum_probs=114.4
Q ss_pred HHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCC
Q 018003 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 245 (362)
Q Consensus 166 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~ 245 (362)
.+.+...+ .++.+|||+|||+|.++..+++.+. +|+|+|+++.+++.+++++... ...+.+..+|+... ++
T Consensus 111 ~~~l~~~~--~~~~~VLDiGcG~G~l~~~la~~g~--~v~gvDi~~~~v~~a~~n~~~~----~~~v~~~~~d~~~~-~~ 181 (254)
T 2nxc_A 111 LKALARHL--RPGDKVLDLGTGSGVLAIAAEKLGG--KALGVDIDPMVLPQAEANAKRN----GVRPRFLEGSLEAA-LP 181 (254)
T ss_dssp HHHHHHHC--CTTCEEEEETCTTSHHHHHHHHTTC--EEEEEESCGGGHHHHHHHHHHT----TCCCEEEESCHHHH-GG
T ss_pred HHHHHHhc--CCCCEEEEecCCCcHHHHHHHHhCC--eEEEEECCHHHHHHHHHHHHHc----CCcEEEEECChhhc-Cc
Confidence 34444443 4578999999999999999999876 9999999999999999998776 22288999988652 44
Q ss_pred CCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhcccccccccccCCHHHHH
Q 018003 246 SSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVGFSIPVLGFDDLK 325 (362)
Q Consensus 246 ~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~ 325 (362)
+++||+|+++...++ ...+++++.++|||||+++++.... .+.+.+.
T Consensus 182 ~~~fD~Vv~n~~~~~---~~~~l~~~~~~LkpgG~lils~~~~------------------------------~~~~~v~ 228 (254)
T 2nxc_A 182 FGPFDLLVANLYAEL---HAALAPRYREALVPGGRALLTGILK------------------------------DRAPLVR 228 (254)
T ss_dssp GCCEEEEEEECCHHH---HHHHHHHHHHHEEEEEEEEEEEEEG------------------------------GGHHHHH
T ss_pred CCCCCEEEECCcHHH---HHHHHHHHHHHcCCCCEEEEEeecc------------------------------CCHHHHH
Confidence 678999999876554 4688999999999999999976532 1246789
Q ss_pred HHHHHCCCEEEEEEEeceeEEEEeeC
Q 018003 326 RIFRQFQLVVNLKLFYGHIQHYIVKI 351 (362)
Q Consensus 326 ~ll~~~Gf~~v~~~~~g~~~~~~~~k 351 (362)
++++++||++++....+.+..+..+|
T Consensus 229 ~~l~~~Gf~~~~~~~~~~W~~l~~~k 254 (254)
T 2nxc_A 229 EAMAGAGFRPLEEAAEGEWVLLAYGR 254 (254)
T ss_dssp HHHHHTTCEEEEEEEETTEEEEEEEC
T ss_pred HHHHHCCCEEEEEeccCCeEEEEEEC
Confidence 99999999999888877776665543
No 119
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.65 E-value=8e-16 Score=131.73 Aligned_cols=110 Identities=16% Similarity=0.109 Sum_probs=93.7
Q ss_pred CCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC--CCCCcceEEE
Q 018003 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP--FASSSIDAVH 253 (362)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p--~~~~~fD~V~ 253 (362)
.++.+|||+|||+|.++..++..+ ..+|+|+|+|+.+++.|+++++.. ...++.++++|+..++ +++++||+|+
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~---~~~~v~~~~~d~~~~~~~~~~~~fD~i~ 118 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSRG-AASVLFVESDQRSAAVIARNIEAL---GLSGATLRRGAVAAVVAAGTTSPVDLVL 118 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTT-CSEEEEEECCHHHHHHHHHHHHHH---TCSCEEEEESCHHHHHHHCCSSCCSEEE
T ss_pred CCCCEEEEeCCCcCHHHHHHHHCC-CCeEEEEECCHHHHHHHHHHHHHc---CCCceEEEEccHHHHHhhccCCCccEEE
Confidence 467899999999999999877765 358999999999999999998876 1268999999997764 3468899999
Q ss_pred ecccccCC-CCHHHHHHHHHh--hccCCcEEEEEEEccC
Q 018003 254 AGAAIHCW-SSPSTGVAEISR--VLRPGGVFVGTTYIVD 289 (362)
Q Consensus 254 ~~~vl~h~-~d~~~~l~~i~r--~LkpgG~li~~~~~~~ 289 (362)
++..+++. .+...+++++.+ +|||||++++.++...
T Consensus 119 ~~~p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~~ 157 (189)
T 3p9n_A 119 ADPPYNVDSADVDAILAALGTNGWTREGTVAVVERATTC 157 (189)
T ss_dssp ECCCTTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEETTS
T ss_pred ECCCCCcchhhHHHHHHHHHhcCccCCCeEEEEEecCCC
Confidence 99887775 577899999999 9999999999887654
No 120
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.65 E-value=4.3e-15 Score=133.27 Aligned_cols=142 Identities=18% Similarity=0.166 Sum_probs=115.0
Q ss_pred HHHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHh-CCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCC
Q 018003 163 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR 241 (362)
Q Consensus 163 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~ 241 (362)
......+...+...++.+|||+|||+|.++..+++. ++..+++++|+++.+++.|+++++... +..++.+..+|+.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~--g~~~v~~~~~d~~~ 159 (258)
T 2pwy_A 82 PKDASAMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFW--QVENVRFHLGKLEE 159 (258)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHC--CCCCEEEEESCGGG
T ss_pred chHHHHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhc--CCCCEEEEECchhh
Confidence 344466777777778999999999999999999988 666799999999999999999876530 14689999999988
Q ss_pred CCCCCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhcccccccccccCCH
Q 018003 242 LPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVGFSIPVLGF 321 (362)
Q Consensus 242 ~p~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 321 (362)
.++++++||+|++ +++++..+++++.++|||||++++.++... ..
T Consensus 160 ~~~~~~~~D~v~~-----~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~------------------------------~~ 204 (258)
T 2pwy_A 160 AELEEAAYDGVAL-----DLMEPWKVLEKAALALKPDRFLVAYLPNIT------------------------------QV 204 (258)
T ss_dssp CCCCTTCEEEEEE-----ESSCGGGGHHHHHHHEEEEEEEEEEESCHH------------------------------HH
T ss_pred cCCCCCCcCEEEE-----CCcCHHHHHHHHHHhCCCCCEEEEEeCCHH------------------------------HH
Confidence 8777889999997 467888999999999999999999875421 11
Q ss_pred HHHHHHHHHCCCEEEEEEEe
Q 018003 322 DDLKRIFRQFQLVVNLKLFY 341 (362)
Q Consensus 322 ~~l~~ll~~~Gf~~v~~~~~ 341 (362)
..+.+.+++.||..++....
T Consensus 205 ~~~~~~l~~~gf~~~~~~~~ 224 (258)
T 2pwy_A 205 LELVRAAEAHPFRLERVLEV 224 (258)
T ss_dssp HHHHHHHTTTTEEEEEEEEE
T ss_pred HHHHHHHHHCCCceEEEEEe
Confidence 35666778899987766543
No 121
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.65 E-value=5.8e-16 Score=130.49 Aligned_cols=162 Identities=9% Similarity=0.009 Sum_probs=118.7
Q ss_pred cHHHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCC
Q 018003 162 PEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR 241 (362)
Q Consensus 162 ~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~ 241 (362)
.+.....+..++.. ..+|||+|||+|.++..++...+..+|+++|+|+.|++.++++++.. +...++.+ +|...
T Consensus 36 ld~fY~~~~~~l~~--~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~--g~~~~v~~--~d~~~ 109 (200)
T 3fzg_A 36 LNDFYTYVFGNIKH--VSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKL--KTTIKYRF--LNKES 109 (200)
T ss_dssp HHHHHHHHHHHSCC--CSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHS--CCSSEEEE--ECCHH
T ss_pred HHHHHHHHHhhcCC--CCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhc--CCCccEEE--ecccc
Confidence 34445666777754 77999999999999999999888889999999999999999999876 11224555 66644
Q ss_pred CCCCCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhcccccccccccCCH
Q 018003 242 LPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVGFSIPVLGF 321 (362)
Q Consensus 242 ~p~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 321 (362)
. .+.++||+|++..+|||+++....+..+.+.|||||+++ +-|...-. + ... .+.-.-.
T Consensus 110 ~-~~~~~~DvVLa~k~LHlL~~~~~al~~v~~~L~pggvfI-Sfptksl~-------G----------r~~--gm~~~Y~ 168 (200)
T 3fzg_A 110 D-VYKGTYDVVFLLKMLPVLKQQDVNILDFLQLFHTQNFVI-SFPIKSLS-------G----------KEK--GMEENYQ 168 (200)
T ss_dssp H-HTTSEEEEEEEETCHHHHHHTTCCHHHHHHTCEEEEEEE-EEECCCCC-------------------CT--TCCCCHH
T ss_pred c-CCCCCcChhhHhhHHHhhhhhHHHHHHHHHHhCCCCEEE-EeChHHhc-------C----------CCc--chhhhHH
Confidence 3 356889999999999999777788889999999998776 44422100 0 000 1122234
Q ss_pred HHHHHHHHHCCCEEEEEEEeceeEEEEeeC
Q 018003 322 DDLKRIFRQFQLVVNLKLFYGHIQHYIVKI 351 (362)
Q Consensus 322 ~~l~~ll~~~Gf~~v~~~~~g~~~~~~~~k 351 (362)
..|+..+ ...+.+++...+|.--.|+.+|
T Consensus 169 ~~~~~~~-~~~~~~~~~~~~~nEl~y~~~~ 197 (200)
T 3fzg_A 169 LWFESFT-KGWIKILDSKVIGNELVYITSG 197 (200)
T ss_dssp HHHHHHT-TTTSCEEEEEEETTEEEEEECC
T ss_pred HHHHHhc-cCcceeeeeeeeCceEEEEEec
Confidence 4666666 6677788888888887777765
No 122
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.65 E-value=1.8e-15 Score=131.52 Aligned_cols=114 Identities=18% Similarity=0.096 Sum_probs=98.7
Q ss_pred HHHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCC
Q 018003 163 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL 242 (362)
Q Consensus 163 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~ 242 (362)
......+.+.+...++.+|||+|||+|.++..+++.+ .+|+|+|+++.+++.|++++... ...++.++.+|+...
T Consensus 63 ~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~--~~v~~vD~~~~~~~~a~~~~~~~---~~~~v~~~~~d~~~~ 137 (210)
T 3lbf_A 63 PYMVARMTELLELTPQSRVLEIGTGSGYQTAILAHLV--QHVCSVERIKGLQWQARRRLKNL---DLHNVSTRHGDGWQG 137 (210)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS--SEEEEEESCHHHHHHHHHHHHHT---TCCSEEEEESCGGGC
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHhC--CEEEEEecCHHHHHHHHHHHHHc---CCCceEEEECCcccC
Confidence 3445667777777889999999999999999999985 49999999999999999998875 235799999999886
Q ss_pred CCCCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEc
Q 018003 243 PFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 287 (362)
Q Consensus 243 p~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~ 287 (362)
+...++||+|++..+++|+++ ++.++|||||++++..+.
T Consensus 138 ~~~~~~~D~i~~~~~~~~~~~------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 138 WQARAPFDAIIVTAAPPEIPT------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp CGGGCCEEEEEESSBCSSCCT------HHHHTEEEEEEEEEEECS
T ss_pred CccCCCccEEEEccchhhhhH------HHHHhcccCcEEEEEEcC
Confidence 666789999999999999976 578999999999998876
No 123
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.64 E-value=1.4e-15 Score=136.54 Aligned_cols=111 Identities=14% Similarity=0.144 Sum_probs=90.6
Q ss_pred HHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCC
Q 018003 165 EFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF 244 (362)
Q Consensus 165 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~ 244 (362)
..+.+...+...++.+|||+|||+|.++..+++.+. +|+|+|+|+.|++.|++++... .+..++..++.
T Consensus 33 ~~~~il~~l~l~~g~~VLDlGcGtG~~a~~La~~g~--~V~gvD~S~~ml~~Ar~~~~~~---------~v~~~~~~~~~ 101 (261)
T 3iv6_A 33 DRENDIFLENIVPGSTVAVIGASTRFLIEKALERGA--SVTVFDFSQRMCDDLAEALADR---------CVTIDLLDITA 101 (261)
T ss_dssp HHHHHHHTTTCCTTCEEEEECTTCHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHTSSS---------CCEEEECCTTS
T ss_pred HHHHHHHhcCCCCcCEEEEEeCcchHHHHHHHhcCC--EEEEEECCHHHHHHHHHHHHhc---------cceeeeeeccc
Confidence 346677777778899999999999999999999876 9999999999999999985432 23444444332
Q ss_pred -----CCCcceEEEecccccCCCC--HHHHHHHHHhhccCCcEEEEEEEc
Q 018003 245 -----ASSSIDAVHAGAAIHCWSS--PSTGVAEISRVLRPGGVFVGTTYI 287 (362)
Q Consensus 245 -----~~~~fD~V~~~~vl~h~~d--~~~~l~~i~r~LkpgG~li~~~~~ 287 (362)
.+++||+|++..+++|+.. ...+++++.++| |||+++++...
T Consensus 102 ~~~~~~~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~~ 150 (261)
T 3iv6_A 102 EIPKELAGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRASVKL 150 (261)
T ss_dssp CCCGGGTTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEEB
T ss_pred ccccccCCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEecc
Confidence 2578999999999999864 457999999999 99999998765
No 124
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.64 E-value=1.5e-15 Score=137.96 Aligned_cols=136 Identities=18% Similarity=0.111 Sum_probs=106.6
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHh-CCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCC
Q 018003 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 245 (362)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~ 245 (362)
..+...+...++.+|||+|||+|.++..+++. ++..+++|+|+++.+++.|+++++... +..++.++.+|+.. +++
T Consensus 100 ~~~~~~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~--g~~~v~~~~~d~~~-~~~ 176 (275)
T 1yb2_A 100 SYIIMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFY--DIGNVRTSRSDIAD-FIS 176 (275)
T ss_dssp ------CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTS--CCTTEEEECSCTTT-CCC
T ss_pred HHHHHHcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcC--CCCcEEEEECchhc-cCc
Confidence 45666677778899999999999999999987 556799999999999999999876530 13689999999987 566
Q ss_pred CCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhcccccccccccCCHHHHH
Q 018003 246 SSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVGFSIPVLGFDDLK 325 (362)
Q Consensus 246 ~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~ 325 (362)
+++||+|++ |++++..+++++.++|||||++++.++... ..+.+.
T Consensus 177 ~~~fD~Vi~-----~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~------------------------------~~~~~~ 221 (275)
T 1yb2_A 177 DQMYDAVIA-----DIPDPWNHVQKIASMMKPGSVATFYLPNFD------------------------------QSEKTV 221 (275)
T ss_dssp SCCEEEEEE-----CCSCGGGSHHHHHHTEEEEEEEEEEESSHH------------------------------HHHHHH
T ss_pred CCCccEEEE-----cCcCHHHHHHHHHHHcCCCCEEEEEeCCHH------------------------------HHHHHH
Confidence 788999998 678999999999999999999999875421 123566
Q ss_pred HHHHHCCCEEEEEEE
Q 018003 326 RIFRQFQLVVNLKLF 340 (362)
Q Consensus 326 ~ll~~~Gf~~v~~~~ 340 (362)
+.+++.||..++...
T Consensus 222 ~~l~~~Gf~~~~~~~ 236 (275)
T 1yb2_A 222 LSLSASGMHHLETVE 236 (275)
T ss_dssp HHSGGGTEEEEEEEE
T ss_pred HHHHHCCCeEEEEEE
Confidence 777788997766554
No 125
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.63 E-value=3.4e-15 Score=133.90 Aligned_cols=117 Identities=25% Similarity=0.326 Sum_probs=99.8
Q ss_pred HHHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHh-CCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCC
Q 018003 163 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR 241 (362)
Q Consensus 163 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~ 241 (362)
......+...+...++.+|||+|||+|.++..+++. ++..+++++|+++.+++.|+++++.. +...++.++.+|+.+
T Consensus 79 ~~~~~~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~ 156 (255)
T 3mb5_A 79 PKDAALIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWA--GFDDRVTIKLKDIYE 156 (255)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHH--TCTTTEEEECSCGGG
T ss_pred HhHHHHHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHc--CCCCceEEEECchhh
Confidence 444567778888888999999999999999999998 76779999999999999999998776 123449999999975
Q ss_pred CCCCCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEc
Q 018003 242 LPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 287 (362)
Q Consensus 242 ~p~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~ 287 (362)
. +++++||+|++ +.+++..+++++.++|||||++++..+.
T Consensus 157 ~-~~~~~~D~v~~-----~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 196 (255)
T 3mb5_A 157 G-IEEENVDHVIL-----DLPQPERVVEHAAKALKPGGFFVAYTPC 196 (255)
T ss_dssp C-CCCCSEEEEEE-----CSSCGGGGHHHHHHHEEEEEEEEEEESS
T ss_pred c-cCCCCcCEEEE-----CCCCHHHHHHHHHHHcCCCCEEEEEECC
Confidence 4 66788999997 4678889999999999999999988754
No 126
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.63 E-value=1.9e-14 Score=121.79 Aligned_cols=134 Identities=15% Similarity=0.196 Sum_probs=109.9
Q ss_pred CcHHHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCC
Q 018003 161 GPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADIS 240 (362)
Q Consensus 161 ~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~ 240 (362)
......+.+.+.+...++.+|||+|||+|.++..+++ +..+++|+|+++.+++.+++++... ...++.++++|+.
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~---~~~~~~~~~~d~~ 93 (183)
T 2yxd_A 19 TKEEIRAVSIGKLNLNKDDVVVDVGCGSGGMTVEIAK--RCKFVYAIDYLDGAIEVTKQNLAKF---NIKNCQIIKGRAE 93 (183)
T ss_dssp CCHHHHHHHHHHHCCCTTCEEEEESCCCSHHHHHHHT--TSSEEEEEECSHHHHHHHHHHHHHT---TCCSEEEEESCHH
T ss_pred CHHHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHh--cCCeEEEEeCCHHHHHHHHHHHHHc---CCCcEEEEECCcc
Confidence 3455566777777777788999999999999999988 3459999999999999999998775 1357999999997
Q ss_pred CCCCCCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhcccccccccccCC
Q 018003 241 RLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVGFSIPVLG 320 (362)
Q Consensus 241 ~~p~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 320 (362)
. ++++++||+|++..+ .++..+++++.++ |||.+++.++..+ +
T Consensus 94 ~-~~~~~~~D~i~~~~~----~~~~~~l~~~~~~--~gG~l~~~~~~~~------------------------------~ 136 (183)
T 2yxd_A 94 D-VLDKLEFNKAFIGGT----KNIEKIIEILDKK--KINHIVANTIVLE------------------------------N 136 (183)
T ss_dssp H-HGGGCCCSEEEECSC----SCHHHHHHHHHHT--TCCEEEEEESCHH------------------------------H
T ss_pred c-cccCCCCcEEEECCc----ccHHHHHHHHhhC--CCCEEEEEecccc------------------------------c
Confidence 7 666789999999988 6788999999999 9999999875421 1
Q ss_pred HHHHHHHHHHCCCEEE
Q 018003 321 FDDLKRIFRQFQLVVN 336 (362)
Q Consensus 321 ~~~l~~ll~~~Gf~~v 336 (362)
...+.+.++++||...
T Consensus 137 ~~~~~~~l~~~g~~~~ 152 (183)
T 2yxd_A 137 AAKIINEFESRGYNVD 152 (183)
T ss_dssp HHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHcCCeEE
Confidence 2457889999998554
No 127
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.63 E-value=1.6e-15 Score=129.21 Aligned_cols=107 Identities=20% Similarity=0.174 Sum_probs=85.2
Q ss_pred CCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC-CCCCcceEEEe
Q 018003 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-FASSSIDAVHA 254 (362)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p-~~~~~fD~V~~ 254 (362)
.++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.|+++++.. ...++.+++++...++ +.+++||+|++
T Consensus 21 ~~~~~vLDiGcG~G~~~~~la~~~--~~v~~vD~s~~~l~~a~~~~~~~---~~~~v~~~~~~~~~l~~~~~~~fD~v~~ 95 (185)
T 3mti_A 21 DDESIVVDATMGNGNDTAFLAGLS--KKVYAFDVQEQALGKTSQRLSDL---GIENTELILDGHENLDHYVREPIRAAIF 95 (185)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHH---TCCCEEEEESCGGGGGGTCCSCEEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHHHc---CCCcEEEEeCcHHHHHhhccCCcCEEEE
Confidence 358899999999999999999884 49999999999999999998876 1268999998887653 44678999998
Q ss_pred c-ccccC--------CCCHHHHHHHHHhhccCCcEEEEEEEc
Q 018003 255 G-AAIHC--------WSSPSTGVAEISRVLRPGGVFVGTTYI 287 (362)
Q Consensus 255 ~-~vl~h--------~~d~~~~l~~i~r~LkpgG~li~~~~~ 287 (362)
+ ..+++ ..+...+++++.++|||||++++..+.
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 137 (185)
T 3mti_A 96 NLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYY 137 (185)
T ss_dssp EEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred eCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeC
Confidence 7 33332 123457899999999999999998764
No 128
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.62 E-value=6.2e-15 Score=125.63 Aligned_cols=119 Identities=19% Similarity=0.212 Sum_probs=97.9
Q ss_pred CcHHHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCC
Q 018003 161 GPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADIS 240 (362)
Q Consensus 161 ~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~ 240 (362)
........+.+.+...++.+|||+|||+|.++..+++.+ .+++|+|+++.+++.+++++... +...++.+..+|+.
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~~~~--~~~~~~~~~~~d~~ 92 (192)
T 1l3i_A 17 TAMEVRCLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRV--RRVYAIDRNPEAISTTEMNLQRH--GLGDNVTLMEGDAP 92 (192)
T ss_dssp CCHHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHT--TCCTTEEEEESCHH
T ss_pred ChHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc--CEEEEEECCHHHHHHHHHHHHHc--CCCcceEEEecCHH
Confidence 344555667777777788999999999999999999887 59999999999999999988765 12258999999986
Q ss_pred CCCCCC-CcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEc
Q 018003 241 RLPFAS-SSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 287 (362)
Q Consensus 241 ~~p~~~-~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~ 287 (362)
. +++. ++||+|++..+++ +...+++++.++|+|||.+++.++.
T Consensus 93 ~-~~~~~~~~D~v~~~~~~~---~~~~~l~~~~~~l~~gG~l~~~~~~ 136 (192)
T 1l3i_A 93 E-ALCKIPDIDIAVVGGSGG---ELQEILRIIKDKLKPGGRIIVTAIL 136 (192)
T ss_dssp H-HHTTSCCEEEEEESCCTT---CHHHHHHHHHHTEEEEEEEEEEECB
T ss_pred H-hcccCCCCCEEEECCchH---HHHHHHHHHHHhcCCCcEEEEEecC
Confidence 6 3333 5899999998876 4688999999999999999988753
No 129
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.62 E-value=1.6e-15 Score=143.89 Aligned_cols=116 Identities=19% Similarity=0.248 Sum_probs=97.8
Q ss_pred HHHHHhhcC--CCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC
Q 018003 166 FELMKGYLK--PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP 243 (362)
Q Consensus 166 ~~~l~~~l~--~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p 243 (362)
.+.+...+. ..++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.|++++... ..++.++++|+...+
T Consensus 220 l~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~~g~--~V~gvDis~~al~~A~~n~~~~----~~~v~~~~~D~~~~~ 293 (381)
T 3dmg_A 220 LEALQERLGPEGVRGRQVLDLGAGYGALTLPLARMGA--EVVGVEDDLASVLSLQKGLEAN----ALKAQALHSDVDEAL 293 (381)
T ss_dssp HHHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHTTC--EEEEEESBHHHHHHHHHHHHHT----TCCCEEEECSTTTTS
T ss_pred HHHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHHc----CCCeEEEEcchhhcc
Confidence 344444442 33578999999999999999999865 9999999999999999998876 345899999999887
Q ss_pred CCCCcceEEEecccccC-----CCCHHHHHHHHHhhccCCcEEEEEEEc
Q 018003 244 FASSSIDAVHAGAAIHC-----WSSPSTGVAEISRVLRPGGVFVGTTYI 287 (362)
Q Consensus 244 ~~~~~fD~V~~~~vl~h-----~~d~~~~l~~i~r~LkpgG~li~~~~~ 287 (362)
.++++||+|+++..+++ ..+...+++++.++|||||.++++...
T Consensus 294 ~~~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~ 342 (381)
T 3dmg_A 294 TEEARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSNP 342 (381)
T ss_dssp CTTCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECT
T ss_pred ccCCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEEcC
Confidence 76789999999999888 445678999999999999999998654
No 130
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.62 E-value=3e-15 Score=130.84 Aligned_cols=107 Identities=17% Similarity=0.129 Sum_probs=89.9
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC--CCCCcceEEEe
Q 018003 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP--FASSSIDAVHA 254 (362)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p--~~~~~fD~V~~ 254 (362)
++.+|||||||+|.++..+++..++.+++|+|+|+.+++.|++++... ...++.++++|+..++ +++++||.|++
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~---~~~nv~~~~~d~~~l~~~~~~~~~d~v~~ 114 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDS---EAQNVKLLNIDADTLTDVFEPGEVKRVYL 114 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHS---CCSSEEEECCCGGGHHHHCCTTSCCEEEE
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHc---CCCCEEEEeCCHHHHHhhcCcCCcCEEEE
Confidence 467999999999999999999877789999999999999999988765 2468999999998876 67889999987
Q ss_pred cccccCCCC--------HHHHHHHHHhhccCCcEEEEEEE
Q 018003 255 GAAIHCWSS--------PSTGVAEISRVLRPGGVFVGTTY 286 (362)
Q Consensus 255 ~~vl~h~~d--------~~~~l~~i~r~LkpgG~li~~~~ 286 (362)
.....+... ...+++++.++|||||.+++.+.
T Consensus 115 ~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td 154 (213)
T 2fca_A 115 NFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTD 154 (213)
T ss_dssp ESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEES
T ss_pred ECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeC
Confidence 654332221 25789999999999999999874
No 131
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.61 E-value=1.3e-15 Score=133.72 Aligned_cols=108 Identities=15% Similarity=0.091 Sum_probs=90.1
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCC-C--CCCCcceEEE
Q 018003 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-P--FASSSIDAVH 253 (362)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~-p--~~~~~fD~V~ 253 (362)
++.+|||||||+|.++..+++..+...|+|+|+|+.+++.|++++... ...++.++++|+..+ + +++++||.|+
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~---~l~nv~~~~~Da~~~l~~~~~~~~~d~v~ 110 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEE---GLSNLRVMCHDAVEVLHKMIPDNSLRMVQ 110 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHT---TCSSEEEECSCHHHHHHHHSCTTCEEEEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHh---CCCcEEEEECCHHHHHHHHcCCCChheEE
Confidence 467999999999999999999988889999999999999999988765 246899999998774 3 6789999999
Q ss_pred ecccccCCCCH--------HHHHHHHHhhccCCcEEEEEEEc
Q 018003 254 AGAAIHCWSSP--------STGVAEISRVLRPGGVFVGTTYI 287 (362)
Q Consensus 254 ~~~vl~h~~d~--------~~~l~~i~r~LkpgG~li~~~~~ 287 (362)
+++...+.... ..+++++.++|||||.+++.+..
T Consensus 111 ~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~ 152 (218)
T 3dxy_A 111 LFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDW 152 (218)
T ss_dssp EESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESC
T ss_pred EeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCC
Confidence 88554332221 25899999999999999998843
No 132
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.61 E-value=1.6e-14 Score=131.35 Aligned_cols=138 Identities=17% Similarity=0.163 Sum_probs=108.2
Q ss_pred HHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCC
Q 018003 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 245 (362)
Q Consensus 166 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~ 245 (362)
...+.+.+. ++.+|||+|||+|.++..+++.+.. +|+|+|+|+.+++.|+++++.+ +...++.++++|+.+++.
T Consensus 116 ~~~l~~~~~--~~~~VLDlgcG~G~~~~~la~~~~~-~V~~vD~s~~~~~~a~~n~~~n--~~~~~v~~~~~D~~~~~~- 189 (278)
T 2frn_A 116 RVRMAKVAK--PDELVVDMFAGIGHLSLPIAVYGKA-KVIAIEKDPYTFKFLVENIHLN--KVEDRMSAYNMDNRDFPG- 189 (278)
T ss_dssp HHHHHHHCC--TTCEEEETTCTTTTTHHHHHHHTCC-EEEEECCCHHHHHHHHHHHHHT--TCTTTEEEECSCTTTCCC-
T ss_pred HHHHHHhCC--CCCEEEEecccCCHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHHc--CCCceEEEEECCHHHhcc-
Confidence 344555544 4789999999999999999998863 7999999999999999998865 223459999999998875
Q ss_pred CCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhcccccccccccCCHHHHH
Q 018003 246 SSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVGFSIPVLGFDDLK 325 (362)
Q Consensus 246 ~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~ 325 (362)
+++||+|++... .+...+++++.++|||||++++.+..... ...--..+.+.
T Consensus 190 ~~~fD~Vi~~~p----~~~~~~l~~~~~~LkpgG~l~~~~~~~~~------------------------~~~~~~~~~i~ 241 (278)
T 2frn_A 190 ENIADRILMGYV----VRTHEFIPKALSIAKDGAIIHYHNTVPEK------------------------LMPREPFETFK 241 (278)
T ss_dssp CSCEEEEEECCC----SSGGGGHHHHHHHEEEEEEEEEEEEEEGG------------------------GTTTTTHHHHH
T ss_pred cCCccEEEECCc----hhHHHHHHHHHHHCCCCeEEEEEEeeccc------------------------cccccHHHHHH
Confidence 778999998543 45568899999999999999998775321 11123456788
Q ss_pred HHHHHCCCEEEE
Q 018003 326 RIFRQFQLVVNL 337 (362)
Q Consensus 326 ~ll~~~Gf~~v~ 337 (362)
+.++++||....
T Consensus 242 ~~~~~~G~~~~~ 253 (278)
T 2frn_A 242 RITKEYGYDVEK 253 (278)
T ss_dssp HHHHHTTCEEEE
T ss_pred HHHHHcCCeeEE
Confidence 999999997654
No 133
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.61 E-value=7.4e-15 Score=130.01 Aligned_cols=142 Identities=16% Similarity=0.158 Sum_probs=102.5
Q ss_pred hcCCCCCCeEEEEcCccchHHHHHHHh-CCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCC---CCCCCC
Q 018003 172 YLKPVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR---LPFASS 247 (362)
Q Consensus 172 ~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~---~p~~~~ 247 (362)
.+...++.+|||+|||+|.++..+++. ++..+|+|+|+|+.+++.+.+..+.. .++.++.+|+.. +++.++
T Consensus 72 ~~~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~-----~~v~~~~~d~~~~~~~~~~~~ 146 (233)
T 2ipx_A 72 QIHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR-----TNIIPVIEDARHPHKYRMLIA 146 (233)
T ss_dssp CCCCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC-----TTEEEECSCTTCGGGGGGGCC
T ss_pred eecCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc-----CCeEEEEcccCChhhhcccCC
Confidence 344567889999999999999999987 45569999999999888777766553 689999999987 455578
Q ss_pred cceEEEecccccCCCCH-HHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhcccccccccccCCHHHHHH
Q 018003 248 SIDAVHAGAAIHCWSSP-STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVGFSIPVLGFDDLKR 326 (362)
Q Consensus 248 ~fD~V~~~~vl~h~~d~-~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ 326 (362)
+||+|++... .++. ..++.++.++|||||++++........ . .. . ....+.. + .+
T Consensus 147 ~~D~V~~~~~---~~~~~~~~~~~~~~~LkpgG~l~i~~~~~~~~-~----------------~~-~-~~~~~~~-~-~~ 202 (233)
T 2ipx_A 147 MVDVIFADVA---QPDQTRIVALNAHTFLRNGGHFVISIKANCID-S----------------TA-S-AEAVFAS-E-VK 202 (233)
T ss_dssp CEEEEEECCC---CTTHHHHHHHHHHHHEEEEEEEEEEEEHHHHC-S----------------SS-C-HHHHHHH-H-HH
T ss_pred cEEEEEEcCC---CccHHHHHHHHHHHHcCCCeEEEEEEcccccc-c----------------CC-C-HHHHHHH-H-HH
Confidence 8999998554 2233 456889999999999999965431000 0 00 0 0111222 2 48
Q ss_pred HHHHCCCEEEEEEEec
Q 018003 327 IFRQFQLVVNLKLFYG 342 (362)
Q Consensus 327 ll~~~Gf~~v~~~~~g 342 (362)
+|+++||++++.....
T Consensus 203 ~l~~~Gf~~~~~~~~~ 218 (233)
T 2ipx_A 203 KMQQENMKPQEQLTLE 218 (233)
T ss_dssp TTGGGTEEEEEEEECT
T ss_pred HHHHCCCceEEEEecC
Confidence 8899999988865543
No 134
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.61 E-value=4.1e-15 Score=133.12 Aligned_cols=131 Identities=11% Similarity=-0.041 Sum_probs=104.7
Q ss_pred CCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCC---CCcceEE
Q 018003 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA---SSSIDAV 252 (362)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~---~~~fD~V 252 (362)
.++.+|||||||+|..+..++...+..+|+++|+|+.+++.|+++++.. +..++.++++|+++++.. .++||+|
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~---~l~~v~~~~~d~~~~~~~~~~~~~fD~I 155 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVL---GLKGARALWGRAEVLAREAGHREAYARA 155 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHH---TCSSEEEEECCHHHHTTSTTTTTCEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHh---CCCceEEEECcHHHhhcccccCCCceEE
Confidence 4678999999999999999998877789999999999999999998876 234699999999877643 4789999
Q ss_pred EecccccCCCCHHHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhcccccccccccCCHHHHHHHHHHCC
Q 018003 253 HAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVGFSIPVLGFDDLKRIFRQFQ 332 (362)
Q Consensus 253 ~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~~G 332 (362)
++..+ .+...+++.+.++|||||++++...... . -....+.+.++..|
T Consensus 156 ~s~a~----~~~~~ll~~~~~~LkpgG~l~~~~g~~~--------~--------------------~e~~~~~~~l~~~G 203 (249)
T 3g89_A 156 VARAV----APLCVLSELLLPFLEVGGAAVAMKGPRV--------E--------------------EELAPLPPALERLG 203 (249)
T ss_dssp EEESS----CCHHHHHHHHGGGEEEEEEEEEEECSCC--------H--------------------HHHTTHHHHHHHHT
T ss_pred EECCc----CCHHHHHHHHHHHcCCCeEEEEEeCCCc--------H--------------------HHHHHHHHHHHHcC
Confidence 99654 5778999999999999999987652210 0 01124677888899
Q ss_pred CEEEEEEEe
Q 018003 333 LVVNLKLFY 341 (362)
Q Consensus 333 f~~v~~~~~ 341 (362)
|...+...+
T Consensus 204 ~~~~~~~~~ 212 (249)
T 3g89_A 204 GRLGEVLAL 212 (249)
T ss_dssp EEEEEEEEE
T ss_pred CeEEEEEEe
Confidence 988776654
No 135
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.61 E-value=3.7e-16 Score=135.89 Aligned_cols=140 Identities=19% Similarity=0.044 Sum_probs=90.0
Q ss_pred HHHHHhhcCC-CCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCC
Q 018003 166 FELMKGYLKP-VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF 244 (362)
Q Consensus 166 ~~~l~~~l~~-~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~ 244 (362)
.+.+.+.+.. .++.+|||+|||+|.++..+++.++..+++|+|+++.+++.|++++... ..++.++++|+.. ++
T Consensus 18 ~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~----~~~~~~~~~d~~~-~~ 92 (215)
T 4dzr_A 18 VEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERF----GAVVDWAAADGIE-WL 92 (215)
T ss_dssp HHHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-----------------------CCHHHHHH-HH
T ss_pred HHHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHh----CCceEEEEcchHh-hh
Confidence 4556666654 5688999999999999999999977779999999999999999987665 2278888899876 55
Q ss_pred CC-----CcceEEEecccccC------CCCH--------------------HHHHHHHHhhccCCcEEEEEEEccCCCCc
Q 018003 245 AS-----SSIDAVHAGAAIHC------WSSP--------------------STGVAEISRVLRPGGVFVGTTYIVDGPFN 293 (362)
Q Consensus 245 ~~-----~~fD~V~~~~vl~h------~~d~--------------------~~~l~~i~r~LkpgG~li~~~~~~~~~~~ 293 (362)
++ ++||+|+++..+++ +... ..+++++.++|||||++++....
T Consensus 93 ~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~------ 166 (215)
T 4dzr_A 93 IERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVG------ 166 (215)
T ss_dssp HHHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECT------
T ss_pred hhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEEC------
Confidence 55 89999999644433 2211 67889999999999994444321
Q ss_pred chhhhHHHHHhhhhcccccccccccCCHHHHHHHHH--HCCCEEEEEEE
Q 018003 294 LIPFSRLLRQVCFLDLKIVGFSIPVLGFDDLKRIFR--QFQLVVNLKLF 340 (362)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~--~~Gf~~v~~~~ 340 (362)
....+.+.++++ +.||..++...
T Consensus 167 ------------------------~~~~~~~~~~l~~~~~gf~~~~~~~ 191 (215)
T 4dzr_A 167 ------------------------HNQADEVARLFAPWRERGFRVRKVK 191 (215)
T ss_dssp ------------------------TSCHHHHHHHTGGGGGGTEECCEEE
T ss_pred ------------------------CccHHHHHHHHHHhhcCCceEEEEE
Confidence 123456788888 89997765543
No 136
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.61 E-value=8.2e-15 Score=131.93 Aligned_cols=140 Identities=15% Similarity=0.223 Sum_probs=107.5
Q ss_pred HHHHhhcCCC-CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC--
Q 018003 167 ELMKGYLKPV-LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-- 243 (362)
Q Consensus 167 ~~l~~~l~~~-~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p-- 243 (362)
..+..++... ++.+|||+|||+|.++..+++.++ .+++|+|+++.+++.|++++... ....++.++++|+..++
T Consensus 38 ~ll~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~-~~v~gvDi~~~~~~~a~~n~~~~--~~~~~v~~~~~D~~~~~~~ 114 (259)
T 3lpm_A 38 VLLAKFSYLPIRKGKIIDLCSGNGIIPLLLSTRTK-AKIVGVEIQERLADMAKRSVAYN--QLEDQIEIIEYDLKKITDL 114 (259)
T ss_dssp HHHHHHCCCCSSCCEEEETTCTTTHHHHHHHTTCC-CEEEEECCSHHHHHHHHHHHHHT--TCTTTEEEECSCGGGGGGT
T ss_pred HHHHHHhcCCCCCCEEEEcCCchhHHHHHHHHhcC-CcEEEEECCHHHHHHHHHHHHHC--CCcccEEEEECcHHHhhhh
Confidence 3455666666 789999999999999999999865 39999999999999999998875 22357999999998875
Q ss_pred CCCCcceEEEecccccCC-----C---------------CHHHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHH
Q 018003 244 FASSSIDAVHAGAAIHCW-----S---------------SPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQ 303 (362)
Q Consensus 244 ~~~~~fD~V~~~~vl~h~-----~---------------d~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~ 303 (362)
++.++||+|+++..+.+. . +...+++++.++|||||++++..+.
T Consensus 115 ~~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~---------------- 178 (259)
T 3lpm_A 115 IPKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRP---------------- 178 (259)
T ss_dssp SCTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEECT----------------
T ss_pred hccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcH----------------
Confidence 457899999997554322 1 2357899999999999999985432
Q ss_pred hhhhcccccccccccCCHHHHHHHHHHCCCEEEEEEE
Q 018003 304 VCFLDLKIVGFSIPVLGFDDLKRIFRQFQLVVNLKLF 340 (362)
Q Consensus 304 ~~~~~~~~~~~~~~~~s~~~l~~ll~~~Gf~~v~~~~ 340 (362)
....++..++++.||...+...
T Consensus 179 ---------------~~~~~~~~~l~~~~~~~~~~~~ 200 (259)
T 3lpm_A 179 ---------------ERLLDIIDIMRKYRLEPKRIQF 200 (259)
T ss_dssp ---------------TTHHHHHHHHHHTTEEEEEEEE
T ss_pred ---------------HHHHHHHHHHHHCCCceEEEEE
Confidence 1234577788888997765443
No 137
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.60 E-value=1.4e-15 Score=142.27 Aligned_cols=121 Identities=19% Similarity=0.248 Sum_probs=94.1
Q ss_pred HHHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHh-CCCCEEEEEeCCHHHHHHHHHHHhhcC-----CC---CCCCEE
Q 018003 163 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQES-----NF---PKENFL 233 (362)
Q Consensus 163 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~gvD~s~~~~~~a~~~~~~~~-----~~---~~~~~~ 233 (362)
......+...+...++.+|||+|||+|.++..+++. ++..+|+|+|+++.+++.|++++.... +. ...++.
T Consensus 91 ~~~~~~~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~ 170 (336)
T 2b25_A 91 PKDINMILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVD 170 (336)
T ss_dssp HHHHHHHHHHHTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEE
T ss_pred HHHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceE
Confidence 334566677777778999999999999999999987 666799999999999999999887520 00 135899
Q ss_pred EEEecCCCC--CCCCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEcc
Q 018003 234 LVRADISRL--PFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIV 288 (362)
Q Consensus 234 ~~~~d~~~~--p~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~~ 288 (362)
++.+|+.+. ++++++||+|++. .+++..+++++.++|||||++++..+..
T Consensus 171 ~~~~d~~~~~~~~~~~~fD~V~~~-----~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 222 (336)
T 2b25_A 171 FIHKDISGATEDIKSLTFDAVALD-----MLNPHVTLPVFYPHLKHGGVCAVYVVNI 222 (336)
T ss_dssp EEESCTTCCC-------EEEEEEC-----SSSTTTTHHHHGGGEEEEEEEEEEESSH
T ss_pred EEECChHHcccccCCCCeeEEEEC-----CCCHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 999999876 4567789999984 3566668999999999999999887654
No 138
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.60 E-value=2.6e-15 Score=141.11 Aligned_cols=123 Identities=11% Similarity=0.055 Sum_probs=99.4
Q ss_pred HHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHh-------hcCCCCCCCEEEEE
Q 018003 164 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQ-------QESNFPKENFLLVR 236 (362)
Q Consensus 164 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~-------~~~~~~~~~~~~~~ 236 (362)
..+..+++.+...++.+|||||||+|.++..++......+++|+|+++.+++.|++.++ .. +....++.+++
T Consensus 160 ~~i~~il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~-Gl~~~rVefi~ 238 (438)
T 3uwp_A 160 DLVAQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWY-GKKHAEYTLER 238 (438)
T ss_dssp HHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHH-TBCCCEEEEEE
T ss_pred HHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHh-CCCCCCeEEEE
Confidence 34567777788888999999999999999999876544469999999999999987542 22 11136899999
Q ss_pred ecCCCCCCCC--CcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEcc
Q 018003 237 ADISRLPFAS--SSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIV 288 (362)
Q Consensus 237 ~d~~~~p~~~--~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~~ 288 (362)
+|+..+|+.+ ..||+|+++..+ +.+++...|+++.++|||||+|++.....
T Consensus 239 GD~~~lp~~d~~~~aDVVf~Nn~~-F~pdl~~aL~Ei~RvLKPGGrIVssE~f~ 291 (438)
T 3uwp_A 239 GDFLSEEWRERIANTSVIFVNNFA-FGPEVDHQLKERFANMKEGGRIVSSKPFA 291 (438)
T ss_dssp CCTTSHHHHHHHHTCSEEEECCTT-CCHHHHHHHHHHHTTSCTTCEEEESSCSS
T ss_pred CcccCCccccccCCccEEEEcccc-cCchHHHHHHHHHHcCCCCcEEEEeeccc
Confidence 9999988754 479999998775 45788899999999999999999886654
No 139
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.60 E-value=1.6e-14 Score=131.30 Aligned_cols=117 Identities=23% Similarity=0.247 Sum_probs=98.7
Q ss_pred HHHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHh-CCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCC
Q 018003 163 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR 241 (362)
Q Consensus 163 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~ 241 (362)
......+...+...++.+|||+|||+|.++..+++. ++..+++++|+++.+++.|+++++.. +...++.++.+|+..
T Consensus 98 ~~~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~ 175 (277)
T 1o54_A 98 PKDSSFIAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKW--GLIERVTIKVRDISE 175 (277)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHT--TCGGGEEEECCCGGG
T ss_pred HHHHHHHHHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHc--CCCCCEEEEECCHHH
Confidence 344467777778788999999999999999999988 66779999999999999999988765 112579999999976
Q ss_pred CCCCCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEc
Q 018003 242 LPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 287 (362)
Q Consensus 242 ~p~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~ 287 (362)
. +++++||+|++ +.+++..+++++.++|+|||++++.++.
T Consensus 176 ~-~~~~~~D~V~~-----~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 215 (277)
T 1o54_A 176 G-FDEKDVDALFL-----DVPDPWNYIDKCWEALKGGGRFATVCPT 215 (277)
T ss_dssp C-CSCCSEEEEEE-----CCSCGGGTHHHHHHHEEEEEEEEEEESS
T ss_pred c-ccCCccCEEEE-----CCcCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 5 56678999997 4578889999999999999999998753
No 140
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.60 E-value=1.1e-14 Score=128.57 Aligned_cols=112 Identities=17% Similarity=0.158 Sum_probs=95.6
Q ss_pred HHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC
Q 018003 164 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP 243 (362)
Q Consensus 164 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p 243 (362)
.....+.+.+...++.+|||+|||+|.++..+++.+ .+++|+|+++.+++.+++++... . ++.++.+|+....
T Consensus 57 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~----~-~v~~~~~d~~~~~ 129 (231)
T 1vbf_A 57 NLGIFMLDELDLHKGQKVLEIGTGIGYYTALIAEIV--DKVVSVEINEKMYNYASKLLSYY----N-NIKLILGDGTLGY 129 (231)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS--SEEEEEESCHHHHHHHHHHHTTC----S-SEEEEESCGGGCC
T ss_pred HHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHHc--CEEEEEeCCHHHHHHHHHHHhhc----C-CeEEEECCccccc
Confidence 445667777777788999999999999999999987 49999999999999999988765 2 8999999997633
Q ss_pred CCCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEcc
Q 018003 244 FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIV 288 (362)
Q Consensus 244 ~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~~ 288 (362)
..+++||+|++..+++|+. .++.++|||||++++.++..
T Consensus 130 ~~~~~fD~v~~~~~~~~~~------~~~~~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 130 EEEKPYDRVVVWATAPTLL------CKPYEQLKEGGIMILPIGVG 168 (231)
T ss_dssp GGGCCEEEEEESSBBSSCC------HHHHHTEEEEEEEEEEECSS
T ss_pred ccCCCccEEEECCcHHHHH------HHHHHHcCCCcEEEEEEcCC
Confidence 3467899999999999986 36899999999999998654
No 141
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.59 E-value=5e-15 Score=131.40 Aligned_cols=112 Identities=18% Similarity=0.175 Sum_probs=87.5
Q ss_pred CCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhc---CCCCCCCEEEEEecCCC-CC--CCCCcc
Q 018003 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE---SNFPKENFLLVRADISR-LP--FASSSI 249 (362)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~---~~~~~~~~~~~~~d~~~-~p--~~~~~f 249 (362)
.++.+|||||||+|.++..+++..++..++|+|+|+.|++.|++++... ......++.++++|+.. ++ +++++|
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~ 124 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQL 124 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCE
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCe
Confidence 3466899999999999999999887789999999999999999876531 00124689999999987 66 778999
Q ss_pred eEEEecccccCCCC--------HHHHHHHHHhhccCCcEEEEEEEc
Q 018003 250 DAVHAGAAIHCWSS--------PSTGVAEISRVLRPGGVFVGTTYI 287 (362)
Q Consensus 250 D~V~~~~vl~h~~d--------~~~~l~~i~r~LkpgG~li~~~~~ 287 (362)
|.|++...-.+... ...+++++.++|||||.|++.+..
T Consensus 125 D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~ 170 (235)
T 3ckk_A 125 TKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDV 170 (235)
T ss_dssp EEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEESC
T ss_pred eEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCC
Confidence 99987543222110 136899999999999999998754
No 142
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.59 E-value=1e-14 Score=136.51 Aligned_cols=112 Identities=19% Similarity=0.303 Sum_probs=94.8
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCCC
Q 018003 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 246 (362)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~~ 246 (362)
+.+.+.+...++.+|||||||+|.++..+++.+ ..+|+|+|+++ +++.|+++++.. +...++.++.+|+.++++++
T Consensus 54 ~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g-~~~v~gvD~s~-~~~~a~~~~~~~--~~~~~i~~~~~d~~~~~~~~ 129 (340)
T 2fyt_A 54 DFIYQNPHIFKDKVVLDVGCGTGILSMFAAKAG-AKKVLGVDQSE-ILYQAMDIIRLN--KLEDTITLIKGKIEEVHLPV 129 (340)
T ss_dssp HHHHHCGGGTTTCEEEEETCTTSHHHHHHHHTT-CSEEEEEESST-HHHHHHHHHHHT--TCTTTEEEEESCTTTSCCSC
T ss_pred HHHHhhhhhcCCCEEEEeeccCcHHHHHHHHcC-CCEEEEEChHH-HHHHHHHHHHHc--CCCCcEEEEEeeHHHhcCCC
Confidence 445555555668899999999999999999885 35899999997 999999988765 22368999999999998888
Q ss_pred CcceEEEecc---cccCCCCHHHHHHHHHhhccCCcEEE
Q 018003 247 SSIDAVHAGA---AIHCWSSPSTGVAEISRVLRPGGVFV 282 (362)
Q Consensus 247 ~~fD~V~~~~---vl~h~~d~~~~l~~i~r~LkpgG~li 282 (362)
++||+|++.. .+.|..++..+++++.++|||||+++
T Consensus 130 ~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 130 EKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp SCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred CcEEEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 8999999876 56676778899999999999999998
No 143
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.59 E-value=1.1e-13 Score=121.84 Aligned_cols=146 Identities=10% Similarity=0.004 Sum_probs=100.9
Q ss_pred HHHHhhc---CCCCCCeEEEEcCccchHHHHHHHh-CCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCC
Q 018003 167 ELMKGYL---KPVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL 242 (362)
Q Consensus 167 ~~l~~~l---~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~ 242 (362)
..+...+ ...++.+|||+|||+|.++..+++. ++.+.|+|+|+++.|++...+..+. ..++.++++|+...
T Consensus 63 ~~ll~~l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~-----r~nv~~i~~Da~~~ 137 (232)
T 3id6_C 63 GAILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQR-----RPNIFPLLADARFP 137 (232)
T ss_dssp HHHHTTCSCCSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHH-----CTTEEEEECCTTCG
T ss_pred HHHHhhhhhcCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhh-----cCCeEEEEcccccc
Confidence 4455444 3678999999999999999999876 5567999999999987655444333 26899999999764
Q ss_pred CC---CCCcceEEEecccccCCCCHHHHH-HHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhccccccccccc
Q 018003 243 PF---ASSSIDAVHAGAAIHCWSSPSTGV-AEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVGFSIPV 318 (362)
Q Consensus 243 p~---~~~~fD~V~~~~vl~h~~d~~~~l-~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (362)
.. ..++||+|++.... ++....+ ..+.++|||||+|+++.....-. . ...+ ...
T Consensus 138 ~~~~~~~~~~D~I~~d~a~---~~~~~il~~~~~~~LkpGG~lvisik~~~~d----~-------------t~~~--~e~ 195 (232)
T 3id6_C 138 QSYKSVVENVDVLYVDIAQ---PDQTDIAIYNAKFFLKVNGDMLLVIKARSID----V-------------TKDP--KEI 195 (232)
T ss_dssp GGTTTTCCCEEEEEECCCC---TTHHHHHHHHHHHHEEEEEEEEEEEC------------------------CCS--SSS
T ss_pred hhhhccccceEEEEecCCC---hhHHHHHHHHHHHhCCCCeEEEEEEccCCcc----c-------------CCCH--HHH
Confidence 31 24689999988653 5555544 55666999999999985322100 0 0001 111
Q ss_pred CCHHHHHHHHHHCCCEEEEEEEe
Q 018003 319 LGFDDLKRIFRQFQLVVNLKLFY 341 (362)
Q Consensus 319 ~s~~~l~~ll~~~Gf~~v~~~~~ 341 (362)
+ +...+.|+++||++++....
T Consensus 196 ~--~~~~~~L~~~gf~~~~~~~l 216 (232)
T 3id6_C 196 Y--KTEVEKLENSNFETIQIINL 216 (232)
T ss_dssp T--THHHHHHHHTTEEEEEEEEC
T ss_pred H--HHHHHHHHHCCCEEEEEecc
Confidence 1 34556788999999988876
No 144
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.58 E-value=2.7e-15 Score=129.87 Aligned_cols=119 Identities=15% Similarity=0.168 Sum_probs=92.4
Q ss_pred HHHHhhcCCC-CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCC-
Q 018003 167 ELMKGYLKPV-LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF- 244 (362)
Q Consensus 167 ~~l~~~l~~~-~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~- 244 (362)
+.+.+.+... ++.+|||+|||+|.++..++..+. .+|+|+|+|+.+++.|+++++.. +....++.++++|+..+..
T Consensus 42 ~~l~~~l~~~~~~~~vLDlGcGtG~~~~~~~~~~~-~~v~gvD~s~~~l~~a~~~~~~~-~~~~~~v~~~~~d~~~~~~~ 119 (201)
T 2ift_A 42 ETLFNWLMPYIHQSECLDGFAGSGSLGFEALSRQA-KKVTFLELDKTVANQLKKNLQTL-KCSSEQAEVINQSSLDFLKQ 119 (201)
T ss_dssp HHHHHHHHHHHTTCEEEETTCTTCHHHHHHHHTTC-SEEEEECSCHHHHHHHHHHHHHT-TCCTTTEEEECSCHHHHTTS
T ss_pred HHHHHHHHHhcCCCeEEEcCCccCHHHHHHHHccC-CEEEEEECCHHHHHHHHHHHHHh-CCCccceEEEECCHHHHHHh
Confidence 3444443321 467999999999999998777753 58999999999999999998776 1101589999999876432
Q ss_pred -CCCc-ceEEEecccccCCCCHHHHHHHH--HhhccCCcEEEEEEEcc
Q 018003 245 -ASSS-IDAVHAGAAIHCWSSPSTGVAEI--SRVLRPGGVFVGTTYIV 288 (362)
Q Consensus 245 -~~~~-fD~V~~~~vl~h~~d~~~~l~~i--~r~LkpgG~li~~~~~~ 288 (362)
.+++ ||+|++...++ ..+...+++++ .++|||||.+++.+...
T Consensus 120 ~~~~~~fD~I~~~~~~~-~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 120 PQNQPHFDVVFLDPPFH-FNLAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp CCSSCCEEEEEECCCSS-SCHHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred hccCCCCCEEEECCCCC-CccHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 3578 99999988744 56778889999 67899999999987653
No 145
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.58 E-value=9e-15 Score=131.11 Aligned_cols=152 Identities=11% Similarity=-0.035 Sum_probs=99.0
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCC---CCC---CCcce
Q 018003 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL---PFA---SSSID 250 (362)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~---p~~---~~~fD 250 (362)
++.+|||+|||+|.++..++...+..+++|+|+|+.|++.|++++... +...++.++++|+... +++ +++||
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD 142 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQN--NLSDLIKVVKVPQKTLLMDALKEESEIIYD 142 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHT--TCTTTEEEEECCTTCSSTTTSTTCCSCCBS
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHc--CCCccEEEEEcchhhhhhhhhhcccCCccc
Confidence 467999999999999988887754569999999999999999998765 2234599999997652 444 26899
Q ss_pred EEEecccccCCC---------------CHHHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhcccccccc
Q 018003 251 AVHAGAAIHCWS---------------SPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVGFS 315 (362)
Q Consensus 251 ~V~~~~vl~h~~---------------d~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (362)
+|+++...++.. ....++.++.++|||||.+.+... .+..........-.....+
T Consensus 143 ~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~~~----------~~~~~~~~l~~~g~~~~~~ 212 (254)
T 2h00_A 143 FCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKR----------IIHDSLQLKKRLRWYSCML 212 (254)
T ss_dssp EEEECCCCC-------------------------CTTTTHHHHTHHHHHHH----------HHHHHHHHGGGBSCEEEEE
T ss_pred EEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEEHH----------HHHHHHhcccceEEEEECC
Confidence 999985554432 112457889999999998875432 1111111111000111112
Q ss_pred cccCCHHHHHHHHHHCCCEEEEEEE
Q 018003 316 IPVLGFDDLKRIFRQFQLVVNLKLF 340 (362)
Q Consensus 316 ~~~~s~~~l~~ll~~~Gf~~v~~~~ 340 (362)
....+.+.+.++++++||+.++...
T Consensus 213 ~~~~~~~~~~~~l~~~Gf~~v~~~~ 237 (254)
T 2h00_A 213 GKKCSLAPLKEELRIQGVPKVTYTE 237 (254)
T ss_dssp SSTTSHHHHHHHHHHTTCSEEEEEE
T ss_pred CChhHHHHHHHHHHHcCCCceEEEE
Confidence 2334457899999999997765443
No 146
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.58 E-value=1.5e-14 Score=134.10 Aligned_cols=115 Identities=17% Similarity=0.174 Sum_probs=97.3
Q ss_pred HHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCC
Q 018003 164 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGL-FSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL 242 (362)
Q Consensus 164 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~ 242 (362)
.....+.+.+...++.+|||+|||+|.++..+++.+. ..+|+|+|+|+.+++.|+++++.. +..++.++.+|+...
T Consensus 62 ~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~---g~~~v~~~~~d~~~~ 138 (317)
T 1dl5_A 62 SLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERL---GIENVIFVCGDGYYG 138 (317)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHT---TCCSEEEEESCGGGC
T ss_pred HHHHHHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHc---CCCCeEEEECChhhc
Confidence 3456777777778899999999999999999998866 367999999999999999998765 235699999999875
Q ss_pred CCCCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEc
Q 018003 243 PFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 287 (362)
Q Consensus 243 p~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~ 287 (362)
+..+++||+|++..+++|++ +++.++|||||++++....
T Consensus 139 ~~~~~~fD~Iv~~~~~~~~~------~~~~~~LkpgG~lvi~~~~ 177 (317)
T 1dl5_A 139 VPEFSPYDVIFVTVGVDEVP------ETWFTQLKEGGRVIVPINL 177 (317)
T ss_dssp CGGGCCEEEEEECSBBSCCC------HHHHHHEEEEEEEEEEBCB
T ss_pred cccCCCeEEEEEcCCHHHHH------HHHHHhcCCCcEEEEEECC
Confidence 54567899999999999986 5788999999999997543
No 147
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.58 E-value=5.4e-15 Score=127.25 Aligned_cols=112 Identities=15% Similarity=0.238 Sum_probs=91.1
Q ss_pred CCCCCeEEEEcCccchHHHHHHHh-CCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC-CCCCcceEE
Q 018003 175 PVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-FASSSIDAV 252 (362)
Q Consensus 175 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p-~~~~~fD~V 252 (362)
..++.+|||+|||+|.++..+++. ++..+++|+|+++.+++.|+++++.. +...++.++++|+..++ +.+++||+|
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~~~~~~~fD~v 97 (197)
T 3eey_A 20 VKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDL--NLIDRVTLIKDGHQNMDKYIDCPVKAV 97 (197)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHT--TCGGGEEEECSCGGGGGGTCCSCEEEE
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc--CCCCCeEEEECCHHHHhhhccCCceEE
Confidence 345789999999999999999887 34569999999999999999998775 11258999999998775 556889999
Q ss_pred Eecccc---------cCCCCHHHHHHHHHhhccCCcEEEEEEEcc
Q 018003 253 HAGAAI---------HCWSSPSTGVAEISRVLRPGGVFVGTTYIV 288 (362)
Q Consensus 253 ~~~~vl---------~h~~d~~~~l~~i~r~LkpgG~li~~~~~~ 288 (362)
++...+ .+..++..+++++.++|||||++++..+..
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~ 142 (197)
T 3eey_A 98 MFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYG 142 (197)
T ss_dssp EEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCB
T ss_pred EEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccC
Confidence 988754 111134579999999999999999987653
No 148
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.58 E-value=1.9e-14 Score=125.46 Aligned_cols=115 Identities=16% Similarity=0.127 Sum_probs=94.9
Q ss_pred HHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC
Q 018003 165 EFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSG-LFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP 243 (362)
Q Consensus 165 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p 243 (362)
....+.+.+...++.+|||+|||+|.++..+++.+ +..+++++|+++.+++.+++++... ...++.+..+|+....
T Consensus 65 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~---~~~~v~~~~~d~~~~~ 141 (215)
T 2yxe_A 65 MVGMMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKL---GYDNVIVIVGDGTLGY 141 (215)
T ss_dssp HHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHH---TCTTEEEEESCGGGCC
T ss_pred HHHHHHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHc---CCCCeEEEECCcccCC
Confidence 34566667777788999999999999999998875 4469999999999999999988765 1356999999985432
Q ss_pred CCCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEcc
Q 018003 244 FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIV 288 (362)
Q Consensus 244 ~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~~ 288 (362)
...++||+|++..+++|++ +++.++|||||++++..+..
T Consensus 142 ~~~~~fD~v~~~~~~~~~~------~~~~~~L~pgG~lv~~~~~~ 180 (215)
T 2yxe_A 142 EPLAPYDRIYTTAAGPKIP------EPLIRQLKDGGKLLMPVGRY 180 (215)
T ss_dssp GGGCCEEEEEESSBBSSCC------HHHHHTEEEEEEEEEEESSS
T ss_pred CCCCCeeEEEECCchHHHH------HHHHHHcCCCcEEEEEECCC
Confidence 2367899999999999986 48899999999999987653
No 149
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.57 E-value=1.1e-14 Score=134.06 Aligned_cols=139 Identities=12% Similarity=0.118 Sum_probs=102.8
Q ss_pred CCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhc-CCCCCCCEEEEEecCCCCCC--CCCcceEE
Q 018003 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE-SNFPKENFLLVRADISRLPF--ASSSIDAV 252 (362)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~-~~~~~~~~~~~~~d~~~~p~--~~~~fD~V 252 (362)
.++.+|||||||+|.++..+++..+..+++++|+++.+++.|++++... .+....++.++.+|+...+. .+++||+|
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvI 173 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVV 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEE
Confidence 3568999999999999999998755679999999999999999986320 01124689999999877653 36789999
Q ss_pred EecccccCCCCH----HHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhcccccccccccCCHHHHHHHH
Q 018003 253 HAGAAIHCWSSP----STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVGFSIPVLGFDDLKRIF 328 (362)
Q Consensus 253 ~~~~vl~h~~d~----~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll 328 (362)
++....++.++. ..+++++.++|||||++++...+. +. .......+.+.+
T Consensus 174 i~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~--------~~------------------~~~~~~~~~~~l 227 (304)
T 3bwc_A 174 IIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESI--------WL------------------DLELIEKMSRFI 227 (304)
T ss_dssp EEECC---------CCHHHHHHHHHHEEEEEEEEEEECCT--------TT------------------CHHHHHHHHHHH
T ss_pred EECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCc--------cc------------------chHHHHHHHHHH
Confidence 997665554333 588999999999999999875431 00 011245788899
Q ss_pred HHCCCEEEEEEE
Q 018003 329 RQFQLVVNLKLF 340 (362)
Q Consensus 329 ~~~Gf~~v~~~~ 340 (362)
+++||..++...
T Consensus 228 ~~~GF~~v~~~~ 239 (304)
T 3bwc_A 228 RETGFASVQYAL 239 (304)
T ss_dssp HHHTCSEEEEEE
T ss_pred HhCCCCcEEEEE
Confidence 999998777654
No 150
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.57 E-value=1.4e-14 Score=136.15 Aligned_cols=105 Identities=14% Similarity=0.252 Sum_probs=90.0
Q ss_pred CCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCCCCcceEEEec
Q 018003 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAG 255 (362)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~~~~fD~V~~~ 255 (362)
.++.+|||+|||+|.++..+++.+ ..+|+|+|+|+ +++.|+++++.. +...++.++++|++++++++++||+|++.
T Consensus 65 ~~~~~VLDvGcG~G~~~~~la~~g-~~~v~gvD~s~-~l~~a~~~~~~~--~~~~~v~~~~~d~~~~~~~~~~fD~Iis~ 140 (349)
T 3q7e_A 65 FKDKVVLDVGSGTGILCMFAAKAG-ARKVIGIECSS-ISDYAVKIVKAN--KLDHVVTIIKGKVEEVELPVEKVDIIISE 140 (349)
T ss_dssp HTTCEEEEESCTTSHHHHHHHHTT-CSEEEEEECST-HHHHHHHHHHHT--TCTTTEEEEESCTTTCCCSSSCEEEEEEC
T ss_pred CCCCEEEEEeccchHHHHHHHHCC-CCEEEEECcHH-HHHHHHHHHHHc--CCCCcEEEEECcHHHccCCCCceEEEEEc
Confidence 457899999999999999999984 35999999994 999999988775 22456999999999999888999999997
Q ss_pred cc---ccCCCCHHHHHHHHHhhccCCcEEEEE
Q 018003 256 AA---IHCWSSPSTGVAEISRVLRPGGVFVGT 284 (362)
Q Consensus 256 ~v---l~h~~d~~~~l~~i~r~LkpgG~li~~ 284 (362)
.+ +.+..++..+++++.++|||||+++..
T Consensus 141 ~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 141 WMGYCLFYESMLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp CCBBTBTBTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred cccccccCchhHHHHHHHHHHhCCCCCEEccc
Confidence 65 444578899999999999999999744
No 151
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.57 E-value=9.5e-14 Score=122.22 Aligned_cols=140 Identities=11% Similarity=0.127 Sum_probs=102.4
Q ss_pred cCCCCCCeEEEEcCccchHHHHHHHh-CCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC---CCCCc
Q 018003 173 LKPVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP---FASSS 248 (362)
Q Consensus 173 l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p---~~~~~ 248 (362)
+...++.+|||+|||+|.++..+++. ++..+|+|+|+++.+++.++++++.. .++.++++|+.... ...++
T Consensus 69 ~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~-----~~v~~~~~d~~~~~~~~~~~~~ 143 (227)
T 1g8a_A 69 FPIKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER-----RNIVPILGDATKPEEYRALVPK 143 (227)
T ss_dssp CCCCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC-----TTEEEEECCTTCGGGGTTTCCC
T ss_pred cCCCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc-----CCCEEEEccCCCcchhhcccCC
Confidence 33567889999999999999999987 55569999999999999999887653 68999999998732 12358
Q ss_pred ceEEEecccccCCCCHH-HHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhcccccccccccCCHHHHHHH
Q 018003 249 IDAVHAGAAIHCWSSPS-TGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVGFSIPVLGFDDLKRI 327 (362)
Q Consensus 249 fD~V~~~~vl~h~~d~~-~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~l 327 (362)
||+|++... .++.. .+++++.++|||||.+++........ .. . ....+..+++.++
T Consensus 144 ~D~v~~~~~---~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~--~~---------------~---~~~~~~~~~l~~l 200 (227)
T 1g8a_A 144 VDVIFEDVA---QPTQAKILIDNAEVYLKRGGYGMIAVKSRSID--VT---------------K---EPEQVFREVEREL 200 (227)
T ss_dssp EEEEEECCC---STTHHHHHHHHHHHHEEEEEEEEEEEEGGGTC--TT---------------S---CHHHHHHHHHHHH
T ss_pred ceEEEECCC---CHhHHHHHHHHHHHhcCCCCEEEEEEecCCCC--CC---------------C---ChhhhhHHHHHHH
Confidence 999997654 23443 45999999999999999884322110 00 0 0112345677777
Q ss_pred HHHCCCEEEEEEEec
Q 018003 328 FRQFQLVVNLKLFYG 342 (362)
Q Consensus 328 l~~~Gf~~v~~~~~g 342 (362)
+++ |+.++.....
T Consensus 201 -~~~-f~~~~~~~~~ 213 (227)
T 1g8a_A 201 -SEY-FEVIERLNLE 213 (227)
T ss_dssp -HTT-SEEEEEEECT
T ss_pred -Hhh-ceeeeEeccC
Confidence 777 9998877654
No 152
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.56 E-value=3.5e-15 Score=125.05 Aligned_cols=120 Identities=15% Similarity=0.134 Sum_probs=93.9
Q ss_pred HHHHHHHHhhcCC--CCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCC
Q 018003 163 EKEFELMKGYLKP--VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADIS 240 (362)
Q Consensus 163 ~~~~~~l~~~l~~--~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~ 240 (362)
+...+.+.+.+.. .++.+|||+|||+|.++..+++.++ .++|+|+|+.+++.|++++... ..++.++++|+.
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~--~v~~vD~~~~~~~~a~~~~~~~----~~~~~~~~~d~~ 98 (171)
T 1ws6_A 25 VRLRKALFDYLRLRYPRRGRFLDPFAGSGAVGLEAASEGW--EAVLVEKDPEAVRLLKENVRRT----GLGARVVALPVE 98 (171)
T ss_dssp HHHHHHHHHHHHHHCTTCCEEEEETCSSCHHHHHHHHTTC--EEEEECCCHHHHHHHHHHHHHH----TCCCEEECSCHH
T ss_pred HHHHHHHHHHHHhhccCCCeEEEeCCCcCHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHHc----CCceEEEeccHH
Confidence 3444445544432 1578999999999999999999887 6999999999999999998876 228899999987
Q ss_pred CC-C-CC--CCcceEEEecccccCCCCHHHHHHHHH--hhccCCcEEEEEEEccCC
Q 018003 241 RL-P-FA--SSSIDAVHAGAAIHCWSSPSTGVAEIS--RVLRPGGVFVGTTYIVDG 290 (362)
Q Consensus 241 ~~-p-~~--~~~fD~V~~~~vl~h~~d~~~~l~~i~--r~LkpgG~li~~~~~~~~ 290 (362)
+. + .. .++||+|++...++ .+...+++.+. ++|||||++++.++....
T Consensus 99 ~~~~~~~~~~~~~D~i~~~~~~~--~~~~~~~~~~~~~~~L~~gG~~~~~~~~~~~ 152 (171)
T 1ws6_A 99 VFLPEAKAQGERFTVAFMAPPYA--MDLAALFGELLASGLVEAGGLYVLQHPKDLY 152 (171)
T ss_dssp HHHHHHHHTTCCEEEEEECCCTT--SCTTHHHHHHHHHTCEEEEEEEEEEEETTSC
T ss_pred HHHHhhhccCCceEEEEECCCCc--hhHHHHHHHHHhhcccCCCcEEEEEeCCccC
Confidence 63 2 11 24799999998765 56667777777 999999999999887643
No 153
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.56 E-value=8.5e-15 Score=137.31 Aligned_cols=120 Identities=17% Similarity=0.220 Sum_probs=100.3
Q ss_pred HHHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCC
Q 018003 163 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL 242 (362)
Q Consensus 163 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~ 242 (362)
+...+.+.+.+...++.+|||+|||+|.++..+++.++..+++|+|+|+.+++.+++++... ...+.++.+|+...
T Consensus 182 d~~~~~ll~~l~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~----~~~~~~~~~d~~~~ 257 (343)
T 2pjd_A 182 DVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAAN----GVEGEVFASNVFSE 257 (343)
T ss_dssp CHHHHHHHHHSCTTCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHT----TCCCEEEECSTTTT
T ss_pred cHHHHHHHHhcCcCCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHh----CCCCEEEEcccccc
Confidence 34456677777665678999999999999999999987779999999999999999998776 34567888998765
Q ss_pred CCCCCcceEEEecccccC-----CCCHHHHHHHHHhhccCCcEEEEEEEcc
Q 018003 243 PFASSSIDAVHAGAAIHC-----WSSPSTGVAEISRVLRPGGVFVGTTYIV 288 (362)
Q Consensus 243 p~~~~~fD~V~~~~vl~h-----~~d~~~~l~~i~r~LkpgG~li~~~~~~ 288 (362)
+ +++||+|+++.++|+ ..+...+++++.++|||||.+++..+..
T Consensus 258 ~--~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 306 (343)
T 2pjd_A 258 V--KGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANAF 306 (343)
T ss_dssp C--CSCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEETT
T ss_pred c--cCCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEcCC
Confidence 4 678999999999885 3456789999999999999999987653
No 154
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.56 E-value=5.8e-15 Score=124.80 Aligned_cols=120 Identities=14% Similarity=0.150 Sum_probs=93.6
Q ss_pred HHHHHhhcC-CCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCC-CC
Q 018003 166 FELMKGYLK-PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR-LP 243 (362)
Q Consensus 166 ~~~l~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~-~p 243 (362)
.+.+.+.+. ..++.+|||+|||+|.++..+++.+ ..+++|+|+++.+++.|+++++.. +...++.++.+|+.+ ++
T Consensus 19 ~~~~~~~l~~~~~~~~vLDlGcG~G~~~~~l~~~~-~~~v~~vD~~~~~~~~a~~~~~~~--~~~~~~~~~~~d~~~~~~ 95 (177)
T 2esr_A 19 RGAIFNMIGPYFNGGRVLDLFAGSGGLAIEAVSRG-MSAAVLVEKNRKAQAIIQDNIIMT--KAENRFTLLKMEAERAID 95 (177)
T ss_dssp HHHHHHHHCSCCCSCEEEEETCTTCHHHHHHHHTT-CCEEEEECCCHHHHHHHHHHHHTT--TCGGGEEEECSCHHHHHH
T ss_pred HHHHHHHHHhhcCCCeEEEeCCCCCHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHHHc--CCCCceEEEECcHHHhHH
Confidence 345555555 4567899999999999999998874 359999999999999999988765 112479999999876 34
Q ss_pred CCCCcceEEEecccccCCCCHHHHHHHHH--hhccCCcEEEEEEEccC
Q 018003 244 FASSSIDAVHAGAAIHCWSSPSTGVAEIS--RVLRPGGVFVGTTYIVD 289 (362)
Q Consensus 244 ~~~~~fD~V~~~~vl~h~~d~~~~l~~i~--r~LkpgG~li~~~~~~~ 289 (362)
..+++||+|++...+++ .+....++.+. ++|||||++++.++...
T Consensus 96 ~~~~~fD~i~~~~~~~~-~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 142 (177)
T 2esr_A 96 CLTGRFDLVFLDPPYAK-ETIVATIEALAAKNLLSEQVMVVCETDKTV 142 (177)
T ss_dssp HBCSCEEEEEECCSSHH-HHHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred hhcCCCCEEEECCCCCc-chHHHHHHHHHhCCCcCCCcEEEEEECCcc
Confidence 44567999999876532 34566777777 99999999999987653
No 155
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.56 E-value=1.8e-14 Score=122.51 Aligned_cols=126 Identities=19% Similarity=0.169 Sum_probs=98.5
Q ss_pred CCcHHHHHHHHhhcCC-CCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEec
Q 018003 160 PGPEKEFELMKGYLKP-VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRAD 238 (362)
Q Consensus 160 ~~~~~~~~~l~~~l~~-~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d 238 (362)
+.++...+.+.+.+.. .++.+|||+|||+|.++..+++.+ ..+|+|+|+++.+++.|++++... ....++.++++|
T Consensus 26 p~~~~~~~~~~~~l~~~~~~~~vLD~GcG~G~~~~~~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~--~~~~~~~~~~~d 102 (187)
T 2fhp_A 26 PTTDKVKESIFNMIGPYFDGGMALDLYSGSGGLAIEAVSRG-MDKSICIEKNFAALKVIKENIAIT--KEPEKFEVRKMD 102 (187)
T ss_dssp CCCHHHHHHHHHHHCSCCSSCEEEETTCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHH--TCGGGEEEEESC
T ss_pred cCHHHHHHHHHHHHHhhcCCCCEEEeCCccCHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHHHh--CCCcceEEEECc
Confidence 3345555666666643 467899999999999999888764 359999999999999999988775 112479999999
Q ss_pred CCCCC----CCCCcceEEEecccccCCCCHHHHHHHH--HhhccCCcEEEEEEEccC
Q 018003 239 ISRLP----FASSSIDAVHAGAAIHCWSSPSTGVAEI--SRVLRPGGVFVGTTYIVD 289 (362)
Q Consensus 239 ~~~~p----~~~~~fD~V~~~~vl~h~~d~~~~l~~i--~r~LkpgG~li~~~~~~~ 289 (362)
+.... ..+++||+|++...++ ..+....++.+ .++|||||++++.++...
T Consensus 103 ~~~~~~~~~~~~~~fD~i~~~~~~~-~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 158 (187)
T 2fhp_A 103 ANRALEQFYEEKLQFDLVLLDPPYA-KQEIVSQLEKMLERQLLTNEAVIVCETDKTV 158 (187)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCCGG-GCCHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred HHHHHHHHHhcCCCCCEEEECCCCC-chhHHHHHHHHHHhcccCCCCEEEEEeCCcc
Confidence 86632 2367899999988744 45677788888 899999999999887654
No 156
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.56 E-value=2.4e-14 Score=124.10 Aligned_cols=101 Identities=19% Similarity=0.187 Sum_probs=87.2
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCCCCcceEEEecc
Q 018003 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAGA 256 (362)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~~~~fD~V~~~~ 256 (362)
++.+|||+|||+|.++..++...+..+++|+|+|+.+++.+++++... ...++.++++|+...+ +.++||+|++..
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~---~~~~v~~~~~d~~~~~-~~~~~D~i~~~~ 140 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHEL---KLENIEPVQSRVEEFP-SEPPFDGVISRA 140 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHT---TCSSEEEEECCTTTSC-CCSCEEEEECSC
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHc---CCCCeEEEecchhhCC-ccCCcCEEEEec
Confidence 377999999999999999998866679999999999999999988765 1345999999998876 457899999854
Q ss_pred cccCCCCHHHHHHHHHhhccCCcEEEEEE
Q 018003 257 AIHCWSSPSTGVAEISRVLRPGGVFVGTT 285 (362)
Q Consensus 257 vl~h~~d~~~~l~~i~r~LkpgG~li~~~ 285 (362)
+.++..+++++.++|+|||.+++..
T Consensus 141 ----~~~~~~~l~~~~~~L~~gG~l~~~~ 165 (207)
T 1jsx_A 141 ----FASLNDMVSWCHHLPGEQGRFYALK 165 (207)
T ss_dssp ----SSSHHHHHHHHTTSEEEEEEEEEEE
T ss_pred ----cCCHHHHHHHHHHhcCCCcEEEEEe
Confidence 3578899999999999999999864
No 157
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.56 E-value=3.8e-14 Score=134.21 Aligned_cols=124 Identities=15% Similarity=0.125 Sum_probs=99.1
Q ss_pred HHHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCC
Q 018003 163 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL 242 (362)
Q Consensus 163 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~ 242 (362)
+...+.+.+.+...++.+|||+|||+|.++..+++.++..+|+|+|+|+.+++.|++++....-....++.++.+|+..
T Consensus 208 d~~~~~ll~~l~~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~- 286 (375)
T 4dcm_A 208 DIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS- 286 (375)
T ss_dssp CHHHHHHHHTCCCSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTT-
T ss_pred cHHHHHHHHhCcccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhc-
Confidence 3444567888887777899999999999999999998778999999999999999999887610001358899999987
Q ss_pred CCCCCcceEEEecccccCCC---C--HHHHHHHHHhhccCCcEEEEEEEc
Q 018003 243 PFASSSIDAVHAGAAIHCWS---S--PSTGVAEISRVLRPGGVFVGTTYI 287 (362)
Q Consensus 243 p~~~~~fD~V~~~~vl~h~~---d--~~~~l~~i~r~LkpgG~li~~~~~ 287 (362)
++++++||+|+++..+++.. + ...+++++.++|||||.+++....
T Consensus 287 ~~~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~ 336 (375)
T 4dcm_A 287 GVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANR 336 (375)
T ss_dssp TCCTTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEEET
T ss_pred cCCCCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEEC
Confidence 55678999999998887632 2 236899999999999999998754
No 158
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.55 E-value=1.3e-14 Score=125.73 Aligned_cols=121 Identities=12% Similarity=0.100 Sum_probs=94.8
Q ss_pred HHHHHHHHhhcCCC-CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCC
Q 018003 163 EKEFELMKGYLKPV-LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR 241 (362)
Q Consensus 163 ~~~~~~l~~~l~~~-~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~ 241 (362)
+...+.+.+.+... ++.+|||+|||+|.++..++..+. .+|+|+|+|+.+++.|+++++.. ...++.++++|+..
T Consensus 39 ~~~~~~l~~~l~~~~~~~~vLDlgcG~G~~~~~l~~~~~-~~V~~vD~s~~~l~~a~~~~~~~---~~~~v~~~~~D~~~ 114 (202)
T 2fpo_A 39 DRVRETLFNWLAPVIVDAQCLDCFAGSGALGLEALSRYA-AGATLIEMDRAVSQQLIKNLATL---KAGNARVVNSNAMS 114 (202)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEETTCTTCHHHHHHHHTTC-SEEEEECSCHHHHHHHHHHHHHT---TCCSEEEECSCHHH
T ss_pred HHHHHHHHHHHHhhcCCCeEEEeCCCcCHHHHHHHhcCC-CEEEEEECCHHHHHHHHHHHHHc---CCCcEEEEECCHHH
Confidence 34444455444332 578999999999999998777763 48999999999999999998876 12589999999876
Q ss_pred -CCCCCCcceEEEecccccCCCCHHHHHHHHHh--hccCCcEEEEEEEcc
Q 018003 242 -LPFASSSIDAVHAGAAIHCWSSPSTGVAEISR--VLRPGGVFVGTTYIV 288 (362)
Q Consensus 242 -~p~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r--~LkpgG~li~~~~~~ 288 (362)
++...++||+|++...+ |..+...+++++.+ +|||||++++.....
T Consensus 115 ~~~~~~~~fD~V~~~~p~-~~~~~~~~l~~l~~~~~L~pgG~l~i~~~~~ 163 (202)
T 2fpo_A 115 FLAQKGTPHNIVFVDPPF-RRGLLEETINLLEDNGWLADEALIYVESEVE 163 (202)
T ss_dssp HHSSCCCCEEEEEECCSS-STTTHHHHHHHHHHTTCEEEEEEEEEEEEGG
T ss_pred HHhhcCCCCCEEEECCCC-CCCcHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 45556789999998773 45677888999876 599999999887643
No 159
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.55 E-value=1.5e-15 Score=134.99 Aligned_cols=141 Identities=17% Similarity=0.107 Sum_probs=109.0
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCCCCcceEEEecc
Q 018003 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAGA 256 (362)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~~~~fD~V~~~~ 256 (362)
++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.|++++... +...++.++++|+..++ ++++||+|+++.
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~--~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~~~~d~~~~~-~~~~~D~v~~~~ 152 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTG--MRVIAIDIDPVKIALARNNAEVY--GIADKIEFICGDFLLLA-SFLKADVVFLSP 152 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHT--TCGGGEEEEESCHHHHG-GGCCCSEEEECC
T ss_pred CCCEEEECccccCHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHHc--CCCcCeEEEECChHHhc-ccCCCCEEEECC
Confidence 57899999999999999999987 49999999999999999998776 11258999999998876 567999999999
Q ss_pred cccCCCCHHHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhcccccccccccCCHHHHHHHHHHCCCEEE
Q 018003 257 AIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVGFSIPVLGFDDLKRIFRQFQLVVN 336 (362)
Q Consensus 257 vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~~Gf~~v 336 (362)
.++|..++...+.++.++|+|||.+++..... ... ..........+.+.+..++...|...+
T Consensus 153 ~~~~~~~~~~~~~~~~~~L~pgG~~i~~~~~~---------------~~~---~~~~~lp~~~~~~~~~~~l~~~g~~~i 214 (241)
T 3gdh_A 153 PWGGPDYATAETFDIRTMMSPDGFEIFRLSKK---------------ITN---NIVYFLPRNADIDQVASLAGPGGQVEI 214 (241)
T ss_dssp CCSSGGGGGSSSBCTTTSCSSCHHHHHHHHHH---------------HCS---CEEEEEETTBCHHHHHHTTCTTCCEEE
T ss_pred CcCCcchhhhHHHHHHhhcCCcceeHHHHHHh---------------hCC---ceEEECCCCCCHHHHHHHhccCCCEEE
Confidence 99998888778889999999999866432110 000 000002345677888888888887665
Q ss_pred EEEE
Q 018003 337 LKLF 340 (362)
Q Consensus 337 ~~~~ 340 (362)
....
T Consensus 215 ~~~~ 218 (241)
T 3gdh_A 215 EQNF 218 (241)
T ss_dssp EEEE
T ss_pred Eehh
Confidence 5444
No 160
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.55 E-value=4.4e-14 Score=130.82 Aligned_cols=118 Identities=19% Similarity=0.167 Sum_probs=93.4
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCC
Q 018003 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSG-LFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 245 (362)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~ 245 (362)
..+...+...++.+|||+|||+|..+..+++.. ...+|+|+|+++.+++.+++++++. +..++.++++|+..++..
T Consensus 108 ~l~~~~l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~---g~~~v~~~~~D~~~~~~~ 184 (315)
T 1ixk_A 108 MYPPVALDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRL---GVLNVILFHSSSLHIGEL 184 (315)
T ss_dssp HHHHHHHCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHH---TCCSEEEESSCGGGGGGG
T ss_pred HHHHHHhCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHh---CCCeEEEEECChhhcccc
Confidence 344556677789999999999999999999874 3469999999999999999998876 134799999999887655
Q ss_pred CCcceEEEec------ccccCCCCH----------------HHHHHHHHhhccCCcEEEEEEEc
Q 018003 246 SSSIDAVHAG------AAIHCWSSP----------------STGVAEISRVLRPGGVFVGTTYI 287 (362)
Q Consensus 246 ~~~fD~V~~~------~vl~h~~d~----------------~~~l~~i~r~LkpgG~li~~~~~ 287 (362)
+++||+|++. .++.+.++. ..+|+++.++|||||++++++-.
T Consensus 185 ~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs 248 (315)
T 1ixk_A 185 NVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCS 248 (315)
T ss_dssp CCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred cccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 6789999984 334443321 47899999999999999998753
No 161
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.55 E-value=2.9e-14 Score=135.24 Aligned_cols=115 Identities=16% Similarity=0.212 Sum_probs=94.9
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCCC
Q 018003 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 246 (362)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~~ 246 (362)
+.+.......++.+|||+|||+|.++..+++.+. .+|+|+|+| .|++.|+++++.. +...++.++++|+++++++
T Consensus 53 ~~i~~~~~~~~~~~VLDlGcGtG~ls~~la~~g~-~~V~gvD~s-~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~~~- 127 (376)
T 3r0q_C 53 NAVFQNKHHFEGKTVLDVGTGSGILAIWSAQAGA-RKVYAVEAT-KMADHARALVKAN--NLDHIVEVIEGSVEDISLP- 127 (376)
T ss_dssp HHHHTTTTTTTTCEEEEESCTTTHHHHHHHHTTC-SEEEEEESS-TTHHHHHHHHHHT--TCTTTEEEEESCGGGCCCS-
T ss_pred HHHHhccccCCCCEEEEeccCcCHHHHHHHhcCC-CEEEEEccH-HHHHHHHHHHHHc--CCCCeEEEEECchhhcCcC-
Confidence 4454555556789999999999999999999863 599999999 9999999988775 2345699999999998876
Q ss_pred CcceEEEecccccCC---CCHHHHHHHHHhhccCCcEEEEEEE
Q 018003 247 SSIDAVHAGAAIHCW---SSPSTGVAEISRVLRPGGVFVGTTY 286 (362)
Q Consensus 247 ~~fD~V~~~~vl~h~---~d~~~~l~~i~r~LkpgG~li~~~~ 286 (362)
++||+|++..+.+++ .++..+++++.++|||||++++...
T Consensus 128 ~~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~~ 170 (376)
T 3r0q_C 128 EKVDVIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSHA 170 (376)
T ss_dssp SCEEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSEE
T ss_pred CcceEEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEecC
Confidence 889999996654444 5688899999999999999987544
No 162
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.54 E-value=4.7e-14 Score=128.19 Aligned_cols=121 Identities=20% Similarity=0.259 Sum_probs=100.4
Q ss_pred HHHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHh-CCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCC
Q 018003 163 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR 241 (362)
Q Consensus 163 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~ 241 (362)
......+...+...++.+|||+|||+|.++..+++. ++..+++++|+++.+++.|+++++...+....++.++.+|+..
T Consensus 85 ~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~ 164 (280)
T 1i9g_A 85 PKDAAQIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLAD 164 (280)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGG
T ss_pred HHHHHHHHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHh
Confidence 344567777777778899999999999999999985 5567999999999999999998764200013589999999988
Q ss_pred CCCCCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEcc
Q 018003 242 LPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIV 288 (362)
Q Consensus 242 ~p~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~~ 288 (362)
.++++++||+|++ +++++..+++++.++|||||++++.++..
T Consensus 165 ~~~~~~~~D~v~~-----~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 206 (280)
T 1i9g_A 165 SELPDGSVDRAVL-----DMLAPWEVLDAVSRLLVAGGVLMVYVATV 206 (280)
T ss_dssp CCCCTTCEEEEEE-----ESSCGGGGHHHHHHHEEEEEEEEEEESSH
T ss_pred cCCCCCceeEEEE-----CCcCHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 8877889999997 45788899999999999999999988753
No 163
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.54 E-value=9.3e-15 Score=128.33 Aligned_cols=116 Identities=9% Similarity=0.118 Sum_probs=91.4
Q ss_pred HHhhcCCCCCCeEEEEcCccchHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCC-CCCCC
Q 018003 169 MKGYLKPVLGGNIIDASCGSGLFSRIFAKSG-LFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR-LPFAS 246 (362)
Q Consensus 169 l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~-~p~~~ 246 (362)
+...+...++.+|||+|||+|..+..+++.. +..+|+++|+++.+++.|+++++.. +...++.++++|+.+ ++...
T Consensus 50 l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~l~~~~ 127 (221)
T 3u81_A 50 MDAVIREYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFA--GLQDKVTILNGASQDLIPQLK 127 (221)
T ss_dssp HHHHHHHHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHH--TCGGGEEEEESCHHHHGGGTT
T ss_pred HHHHHHhcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHc--CCCCceEEEECCHHHHHHHHH
Confidence 3333333456799999999999999999863 3579999999999999999998876 223469999999854 33222
Q ss_pred -----CcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEc
Q 018003 247 -----SSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 287 (362)
Q Consensus 247 -----~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~ 287 (362)
++||+|++....++..+...+++.+ ++|||||++++.+..
T Consensus 128 ~~~~~~~fD~V~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv~~~~~ 172 (221)
T 3u81_A 128 KKYDVDTLDMVFLDHWKDRYLPDTLLLEKC-GLLRKGTVLLADNVI 172 (221)
T ss_dssp TTSCCCCCSEEEECSCGGGHHHHHHHHHHT-TCCCTTCEEEESCCC
T ss_pred HhcCCCceEEEEEcCCcccchHHHHHHHhc-cccCCCeEEEEeCCC
Confidence 6899999998888876667788888 999999999986543
No 164
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.54 E-value=8.9e-14 Score=126.67 Aligned_cols=121 Identities=15% Similarity=0.147 Sum_probs=92.0
Q ss_pred HHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeC-CHHHHHHHHHHHhhcC---CCCC----CCEEEE
Q 018003 164 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDY-SENMLKQCYEFVQQES---NFPK----ENFLLV 235 (362)
Q Consensus 164 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~-s~~~~~~a~~~~~~~~---~~~~----~~~~~~ 235 (362)
...+.+.......++.+|||+|||+|.++..+++.+. .+|+|+|+ ++.+++.|++++..+. ++.. .++.+.
T Consensus 66 ~l~~~l~~~~~~~~~~~vLDlG~G~G~~~~~~a~~~~-~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~ 144 (281)
T 3bzb_A 66 ALADTLCWQPELIAGKTVCELGAGAGLVSIVAFLAGA-DQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVV 144 (281)
T ss_dssp HHHHHHHHCGGGTTTCEEEETTCTTSHHHHHHHHTTC-SEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEE
T ss_pred HHHHHHHhcchhcCCCeEEEecccccHHHHHHHHcCC-CEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEE
Confidence 3345555555445678999999999999999888763 58999999 8999999999883210 0111 367777
Q ss_pred EecCCCCC--C----CCCcceEEEecccccCCCCHHHHHHHHHhhcc---C--CcEEEEEE
Q 018003 236 RADISRLP--F----ASSSIDAVHAGAAIHCWSSPSTGVAEISRVLR---P--GGVFVGTT 285 (362)
Q Consensus 236 ~~d~~~~p--~----~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~Lk---p--gG~li~~~ 285 (362)
..|..+.. + .+++||+|++..+++|.++...+++++.++|| | ||++++..
T Consensus 145 ~~~~~~~~~~~~~~~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~ 205 (281)
T 3bzb_A 145 PYRWGDSPDSLQRCTGLQRFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALVTF 205 (281)
T ss_dssp ECCTTSCTHHHHHHHSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEEEE
T ss_pred EecCCCccHHHHhhccCCCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEEEE
Confidence 66654321 1 35789999999999999999999999999999 9 99987753
No 165
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.54 E-value=4.7e-14 Score=125.92 Aligned_cols=105 Identities=19% Similarity=0.263 Sum_probs=86.8
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcC--C---CCCCCEEEEEecCCC-CC--CCCCc
Q 018003 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES--N---FPKENFLLVRADISR-LP--FASSS 248 (362)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~--~---~~~~~~~~~~~d~~~-~p--~~~~~ 248 (362)
++.+|||||||+|.++..+++.++...++|+|+|+.+++.+++++.... + ....++.++++|+.. ++ ++.++
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~ 128 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQ 128 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTC
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccccc
Confidence 4679999999999999999999887799999999999999998876420 0 013689999999986 56 66789
Q ss_pred ceEEEecccccCCCCH-------------HHHHHHHHhhccCCcEEEEEEE
Q 018003 249 IDAVHAGAAIHCWSSP-------------STGVAEISRVLRPGGVFVGTTY 286 (362)
Q Consensus 249 fD~V~~~~vl~h~~d~-------------~~~l~~i~r~LkpgG~li~~~~ 286 (362)
+|.|+.. +++| ..+++++.++|||||.|++.+.
T Consensus 129 ~d~v~~~-----~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td 174 (246)
T 2vdv_E 129 LSKMFFC-----FPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITD 174 (246)
T ss_dssp EEEEEEE-----SCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEES
T ss_pred cCEEEEE-----CCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEec
Confidence 9999853 3555 4899999999999999999764
No 166
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.53 E-value=5e-14 Score=131.21 Aligned_cols=105 Identities=20% Similarity=0.288 Sum_probs=89.0
Q ss_pred CCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCCCCcceEEEe
Q 018003 175 PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHA 254 (362)
Q Consensus 175 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~~~~fD~V~~ 254 (362)
..++.+|||+|||+|.++..+++.+ ..+|+|+|++ .+++.|+++++.. +...++.++.+|+.++++++++||+|++
T Consensus 36 ~~~~~~VLDiGcGtG~ls~~la~~g-~~~v~~vD~s-~~~~~a~~~~~~~--~~~~~i~~~~~d~~~~~~~~~~~D~Ivs 111 (328)
T 1g6q_1 36 LFKDKIVLDVGCGTGILSMFAAKHG-AKHVIGVDMS-SIIEMAKELVELN--GFSDKITLLRGKLEDVHLPFPKVDIIIS 111 (328)
T ss_dssp HHTTCEEEEETCTTSHHHHHHHHTC-CSEEEEEESS-THHHHHHHHHHHT--TCTTTEEEEESCTTTSCCSSSCEEEEEE
T ss_pred hcCCCEEEEecCccHHHHHHHHHCC-CCEEEEEChH-HHHHHHHHHHHHc--CCCCCEEEEECchhhccCCCCcccEEEE
Confidence 3457899999999999999999875 3589999999 5999999988765 2345799999999999888789999998
Q ss_pred cc---cccCCCCHHHHHHHHHhhccCCcEEEE
Q 018003 255 GA---AIHCWSSPSTGVAEISRVLRPGGVFVG 283 (362)
Q Consensus 255 ~~---vl~h~~d~~~~l~~i~r~LkpgG~li~ 283 (362)
.. .+.+..++..++.++.++|||||+++.
T Consensus 112 ~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 112 EWMGYFLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp CCCBTTBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred eCchhhcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 74 455566788999999999999999984
No 167
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.53 E-value=4.6e-14 Score=125.03 Aligned_cols=114 Identities=14% Similarity=0.139 Sum_probs=94.1
Q ss_pred HHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC
Q 018003 164 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP 243 (362)
Q Consensus 164 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p 243 (362)
.....+.+.+...++.+|||+|||+|.++..+++.++ .+|+++|+++.+++.|++++... ...++.+..+|+ ..+
T Consensus 78 ~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~---~~~~v~~~~~d~-~~~ 152 (235)
T 1jg1_A 78 HMVAIMLEIANLKPGMNILEVGTGSGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERA---GVKNVHVILGDG-SKG 152 (235)
T ss_dssp HHHHHHHHHHTCCTTCCEEEECCTTSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHT---TCCSEEEEESCG-GGC
T ss_pred HHHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHc---CCCCcEEEECCc-ccC
Confidence 3445666677777788999999999999999999864 59999999999999999988765 235699999997 334
Q ss_pred CCCC-cceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEcc
Q 018003 244 FASS-SIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIV 288 (362)
Q Consensus 244 ~~~~-~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~~ 288 (362)
+++. .||+|++..++++++ +++.++|||||++++.++..
T Consensus 153 ~~~~~~fD~Ii~~~~~~~~~------~~~~~~L~pgG~lvi~~~~~ 192 (235)
T 1jg1_A 153 FPPKAPYDVIIVTAGAPKIP------EPLIEQLKIGGKLIIPVGSY 192 (235)
T ss_dssp CGGGCCEEEEEECSBBSSCC------HHHHHTEEEEEEEEEEECSS
T ss_pred CCCCCCccEEEECCcHHHHH------HHHHHhcCCCcEEEEEEecC
Confidence 4443 599999999999885 37899999999999998764
No 168
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.53 E-value=5.7e-14 Score=126.50 Aligned_cols=117 Identities=13% Similarity=0.061 Sum_probs=93.9
Q ss_pred HHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhh---cCCCCCCCEEEEEecCCCC--
Q 018003 168 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQ---ESNFPKENFLLVRADISRL-- 242 (362)
Q Consensus 168 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~---~~~~~~~~~~~~~~d~~~~-- 242 (362)
.+..++...++.+|||+|||+|.++..++++.+..+++|+|+++.+++.|++++.. . ....++.++++|+...
T Consensus 27 lL~~~~~~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~--~l~~~v~~~~~D~~~~~~ 104 (260)
T 2ozv_A 27 LLASLVADDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNA--AFSARIEVLEADVTLRAK 104 (260)
T ss_dssp HHHHTCCCCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGT--TTGGGEEEEECCTTCCHH
T ss_pred HHHHHhcccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhC--CCcceEEEEeCCHHHHhh
Confidence 45566666678899999999999999999998777999999999999999998766 3 1123699999999887
Q ss_pred -----CCCCCcceEEEecccccC------------------CCCHHHHHHHHHhhccCCcEEEEEEE
Q 018003 243 -----PFASSSIDAVHAGAAIHC------------------WSSPSTGVAEISRVLRPGGVFVGTTY 286 (362)
Q Consensus 243 -----p~~~~~fD~V~~~~vl~h------------------~~d~~~~l~~i~r~LkpgG~li~~~~ 286 (362)
++++++||+|+++-.... ..+...+++++.++|||||++++..+
T Consensus 105 ~~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 171 (260)
T 2ozv_A 105 ARVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISR 171 (260)
T ss_dssp HHHHTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred hhhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEc
Confidence 256789999999833221 12467889999999999999998654
No 169
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.53 E-value=2.7e-15 Score=132.76 Aligned_cols=156 Identities=15% Similarity=0.118 Sum_probs=93.6
Q ss_pred HHHHhhcCC-CCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEE-ecCCCCCC
Q 018003 167 ELMKGYLKP-VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVR-ADISRLPF 244 (362)
Q Consensus 167 ~~l~~~l~~-~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~-~d~~~~p~ 244 (362)
+.+++.+.. .++.+|||||||+|.++..+++.+. .+|+|+|+|+.|++.++++..+.......++.+.. .|+..
T Consensus 26 ~~~L~~~~~~~~g~~VLDiGcGtG~~t~~la~~g~-~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~--- 101 (232)
T 3opn_A 26 EKALKEFHLEINGKTCLDIGSSTGGFTDVMLQNGA-KLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQ--- 101 (232)
T ss_dssp HHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTC-SEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCS---
T ss_pred HHHHHHcCCCCCCCEEEEEccCCCHHHHHHHhcCC-CEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCc---
Confidence 344444443 3567999999999999999999863 49999999999999987742211000001111111 12221
Q ss_pred CCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhh-cccccccccccCCHHH
Q 018003 245 ASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFL-DLKIVGFSIPVLGFDD 323 (362)
Q Consensus 245 ~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~ 323 (362)
..||.+.+..++.++ ..+++++.++|||||.+++.. . +........... ...... +.+..+.++
T Consensus 102 --~~~d~~~~D~v~~~l---~~~l~~i~rvLkpgG~lv~~~-~--------p~~e~~~~~~~~~G~~~d~-~~~~~~~~~ 166 (232)
T 3opn_A 102 --GRPSFTSIDVSFISL---DLILPPLYEILEKNGEVAALI-K--------PQFEAGREQVGKNGIIRDP-KVHQMTIEK 166 (232)
T ss_dssp --CCCSEEEECCSSSCG---GGTHHHHHHHSCTTCEEEEEE-C--------HHHHSCHHHHC-CCCCCCH-HHHHHHHHH
T ss_pred --CCCCEEEEEEEhhhH---HHHHHHHHHhccCCCEEEEEE-C--------cccccCHHHhCcCCeecCc-chhHHHHHH
Confidence 124544444444433 678999999999999999864 1 111111111100 000011 233458889
Q ss_pred HHHHHHHCCCEEEEEEEe
Q 018003 324 LKRIFRQFQLVVNLKLFY 341 (362)
Q Consensus 324 l~~ll~~~Gf~~v~~~~~ 341 (362)
+.++++++||++......
T Consensus 167 l~~~l~~aGf~v~~~~~~ 184 (232)
T 3opn_A 167 VLKTATQLGFSVKGLTFS 184 (232)
T ss_dssp HHHHHHHHTEEEEEEEEC
T ss_pred HHHHHHHCCCEEEEEEEc
Confidence 999999999998776543
No 170
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.53 E-value=5.7e-14 Score=131.88 Aligned_cols=116 Identities=15% Similarity=0.216 Sum_probs=95.4
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCCC
Q 018003 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 246 (362)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~~ 246 (362)
+.+.+.+...++.+|||||||+|.++..+++.+ ..+|+|+|+|+ +++.|+++++.. +...++.++.+|+.+++++
T Consensus 40 ~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g-~~~V~~vD~s~-~~~~a~~~~~~~--~l~~~v~~~~~d~~~~~~~- 114 (348)
T 2y1w_A 40 RAILQNHTDFKDKIVLDVGCGSGILSFFAAQAG-ARKIYAVEAST-MAQHAEVLVKSN--NLTDRIVVIPGKVEEVSLP- 114 (348)
T ss_dssp HHHHHTGGGTTTCEEEEETCTTSHHHHHHHHTT-CSEEEEEECST-HHHHHHHHHHHT--TCTTTEEEEESCTTTCCCS-
T ss_pred HHHHhccccCCcCEEEEcCCCccHHHHHHHhCC-CCEEEEECCHH-HHHHHHHHHHHc--CCCCcEEEEEcchhhCCCC-
Confidence 455566665678899999999999999998874 35999999996 889999888765 2236899999999988765
Q ss_pred CcceEEEecccccCCCC--HHHHHHHHHhhccCCcEEEEEEEc
Q 018003 247 SSIDAVHAGAAIHCWSS--PSTGVAEISRVLRPGGVFVGTTYI 287 (362)
Q Consensus 247 ~~fD~V~~~~vl~h~~d--~~~~l~~i~r~LkpgG~li~~~~~ 287 (362)
++||+|++..+++|+.+ ....+.++.++|||||++++...+
T Consensus 115 ~~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 157 (348)
T 2y1w_A 115 EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTIGD 157 (348)
T ss_dssp SCEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESCEEE
T ss_pred CceeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEecCc
Confidence 67999999999888853 457888999999999999866443
No 171
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.53 E-value=4.3e-14 Score=135.23 Aligned_cols=124 Identities=9% Similarity=-0.028 Sum_probs=96.4
Q ss_pred HHHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHH-------HHHHhhcCCCCCCCEEEE
Q 018003 163 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQC-------YEFVQQESNFPKENFLLV 235 (362)
Q Consensus 163 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a-------~~~~~~~~~~~~~~~~~~ 235 (362)
...+..+.+.+...++.+|||+|||+|.++..+++..+..+|+|+|+++.+++.| ++++... +....++.++
T Consensus 228 p~~v~~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~-Gl~~~nV~~i 306 (433)
T 1u2z_A 228 PNFLSDVYQQCQLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLY-GMRLNNVEFS 306 (433)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHT-TBCCCCEEEE
T ss_pred HHHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHc-CCCCCceEEE
Confidence 3445667777777789999999999999999999875445899999999999988 7777665 1113689999
Q ss_pred EecCCCC--CC--CCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEcc
Q 018003 236 RADISRL--PF--ASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIV 288 (362)
Q Consensus 236 ~~d~~~~--p~--~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~~ 288 (362)
++|.... ++ ..++||+|+++.++ +.+++..+|+++.++|||||++++..+..
T Consensus 307 ~gD~~~~~~~~~~~~~~FDvIvvn~~l-~~~d~~~~L~el~r~LKpGG~lVi~d~f~ 362 (433)
T 1u2z_A 307 LKKSFVDNNRVAELIPQCDVILVNNFL-FDEDLNKKVEKILQTAKVGCKIISLKSLR 362 (433)
T ss_dssp ESSCSTTCHHHHHHGGGCSEEEECCTT-CCHHHHHHHHHHHTTCCTTCEEEESSCSS
T ss_pred EcCccccccccccccCCCCEEEEeCcc-ccccHHHHHHHHHHhCCCCeEEEEeeccC
Confidence 9865432 22 24689999998776 44677889999999999999999875443
No 172
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.53 E-value=1.6e-13 Score=120.29 Aligned_cols=136 Identities=10% Similarity=0.050 Sum_probs=108.8
Q ss_pred HHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCC
Q 018003 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 245 (362)
Q Consensus 166 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~ 245 (362)
++.+.+++.+ +.+|||||||+|.++..+++.++..+|+++|+++.+++.|+++++.. +...++.+..+|......+
T Consensus 12 L~~i~~~v~~--g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~--gl~~~I~~~~gD~l~~~~~ 87 (230)
T 3lec_A 12 LQKVANYVPK--GARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEH--GLTSKIDVRLANGLSAFEE 87 (230)
T ss_dssp HHHHHTTSCT--TEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHT--TCTTTEEEEECSGGGGCCG
T ss_pred HHHHHHhCCC--CCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc--CCCCcEEEEECchhhcccc
Confidence 3566666655 78999999999999999999987678999999999999999999886 3345799999998776544
Q ss_pred CCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhcccccccccccCCHHHHH
Q 018003 246 SSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVGFSIPVLGFDDLK 325 (362)
Q Consensus 246 ~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~ 325 (362)
...||+|+..++.-. -...+|.+..+.|+++|.|+++.. ...+.++
T Consensus 88 ~~~~D~IviaGmGg~--lI~~IL~~~~~~l~~~~~lIlqp~--------------------------------~~~~~lr 133 (230)
T 3lec_A 88 ADNIDTITICGMGGR--LIADILNNDIDKLQHVKTLVLQPN--------------------------------NREDDLR 133 (230)
T ss_dssp GGCCCEEEEEEECHH--HHHHHHHHTGGGGTTCCEEEEEES--------------------------------SCHHHHH
T ss_pred ccccCEEEEeCCchH--HHHHHHHHHHHHhCcCCEEEEECC--------------------------------CChHHHH
Confidence 447999886655331 245678889999999999887631 1356899
Q ss_pred HHHHHCCCEEEEEE
Q 018003 326 RIFRQFQLVVNLKL 339 (362)
Q Consensus 326 ~ll~~~Gf~~v~~~ 339 (362)
++|.+.||.+++..
T Consensus 134 ~~L~~~Gf~i~~E~ 147 (230)
T 3lec_A 134 KWLAANDFEIVAED 147 (230)
T ss_dssp HHHHHTTEEEEEEE
T ss_pred HHHHHCCCEEEEEE
Confidence 99999999887665
No 173
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.52 E-value=3.8e-14 Score=125.45 Aligned_cols=117 Identities=14% Similarity=0.151 Sum_probs=93.5
Q ss_pred HHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCC-C-
Q 018003 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-P- 243 (362)
Q Consensus 166 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~-p- 243 (362)
...+...+...++.+|||+|||+|..+..+++..+..+|+++|+++.+++.|+++++.. +...++.++.+|+... +
T Consensus 60 ~~~l~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~~~ 137 (232)
T 3ntv_A 60 LDLIKQLIRMNNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATY--HFENQVRIIEGNALEQFEN 137 (232)
T ss_dssp HHHHHHHHHHHTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHT--TCTTTEEEEESCGGGCHHH
T ss_pred HHHHHHHHhhcCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc--CCCCcEEEEECCHHHHHHh
Confidence 34444444444578999999999999999999766779999999999999999998876 2235899999999664 3
Q ss_pred CCCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEc
Q 018003 244 FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 287 (362)
Q Consensus 244 ~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~ 287 (362)
..+++||+|++... ..+...+++++.++|||||++++....
T Consensus 138 ~~~~~fD~V~~~~~---~~~~~~~l~~~~~~LkpgG~lv~d~~~ 178 (232)
T 3ntv_A 138 VNDKVYDMIFIDAA---KAQSKKFFEIYTPLLKHQGLVITDNVL 178 (232)
T ss_dssp HTTSCEEEEEEETT---SSSHHHHHHHHGGGEEEEEEEEEECTT
T ss_pred hccCCccEEEEcCc---HHHHHHHHHHHHHhcCCCeEEEEeeCC
Confidence 33688999997654 446778999999999999999885443
No 174
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.52 E-value=4.2e-14 Score=128.38 Aligned_cols=152 Identities=14% Similarity=0.091 Sum_probs=100.5
Q ss_pred HHHhhcCC-CCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEE-EecCCCCC--
Q 018003 168 LMKGYLKP-VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLV-RADISRLP-- 243 (362)
Q Consensus 168 ~l~~~l~~-~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~-~~d~~~~p-- 243 (362)
.+++.+.. .++.+|||+|||||.++..+++.+ ..+|+|+|+|+.|++.+.++ ..++... ..++..++
T Consensus 75 ~~l~~~~~~~~g~~vLDiGcGTG~~t~~L~~~g-a~~V~aVDvs~~mL~~a~r~--------~~rv~~~~~~ni~~l~~~ 145 (291)
T 3hp7_A 75 KALAVFNLSVEDMITIDIGASTGGFTDVMLQNG-AKLVYAVDVGTNQLVWKLRQ--------DDRVRSMEQYNFRYAEPV 145 (291)
T ss_dssp HHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTT-CSEEEEECSSSSCSCHHHHT--------CTTEEEECSCCGGGCCGG
T ss_pred HHHHhcCCCccccEEEecCCCccHHHHHHHhCC-CCEEEEEECCHHHHHHHHHh--------CcccceecccCceecchh
Confidence 34444443 357799999999999999998885 35899999999999986542 2344332 23443332
Q ss_pred -CCCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEE-EccCCCCcchhhhHHHHHhhhhcccccccccccCCH
Q 018003 244 -FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT-YIVDGPFNLIPFSRLLRQVCFLDLKIVGFSIPVLGF 321 (362)
Q Consensus 244 -~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 321 (362)
++..+||+|++..+++++ ..+|.++.|+|||||.+++.. |.++.. .....+ . ..-..+ ..+....
T Consensus 146 ~l~~~~fD~v~~d~sf~sl---~~vL~e~~rvLkpGG~lv~lvkPqfe~~---~~~~~~-----~-G~vrd~-~~~~~~~ 212 (291)
T 3hp7_A 146 DFTEGLPSFASIDVSFISL---NLILPALAKILVDGGQVVALVKPQFEAG---REQIGK-----N-GIVRES-SIHEKVL 212 (291)
T ss_dssp GCTTCCCSEEEECCSSSCG---GGTHHHHHHHSCTTCEEEEEECGGGTSC---GGGCC------C-CCCCCH-HHHHHHH
T ss_pred hCCCCCCCEEEEEeeHhhH---HHHHHHHHHHcCcCCEEEEEECcccccC---hhhcCC-----C-CccCCH-HHHHHHH
Confidence 334569999998887754 778999999999999998863 111100 000000 0 000001 2344577
Q ss_pred HHHHHHHHHCCCEEEEEEEe
Q 018003 322 DDLKRIFRQFQLVVNLKLFY 341 (362)
Q Consensus 322 ~~l~~ll~~~Gf~~v~~~~~ 341 (362)
+++..+++++||.+......
T Consensus 213 ~~v~~~~~~~Gf~v~~~~~s 232 (291)
T 3hp7_A 213 ETVTAFAVDYGFSVKGLDFS 232 (291)
T ss_dssp HHHHHHHHHTTEEEEEEEEC
T ss_pred HHHHHHHHHCCCEEEEEEEC
Confidence 88999999999988776653
No 175
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.52 E-value=1.3e-13 Score=121.27 Aligned_cols=114 Identities=22% Similarity=0.277 Sum_probs=92.1
Q ss_pred HHHhhcC--CCCCCeEEEEcCccchHHHHHHHh-CCCCEEEEEeCCHHHHHHHHHHHhhcCCC---CCCCEEEEEecCCC
Q 018003 168 LMKGYLK--PVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQESNF---PKENFLLVRADISR 241 (362)
Q Consensus 168 ~l~~~l~--~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~gvD~s~~~~~~a~~~~~~~~~~---~~~~~~~~~~d~~~ 241 (362)
.+...+. ..++.+|||+|||+|.++..+++. ++..+|+|+|+++.+++.+++++... +. ...++.++++|+..
T Consensus 66 ~~l~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~~v~~~~~d~~~ 144 (226)
T 1i1n_A 66 YALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKD-DPTLLSSGRVQLVVGDGRM 144 (226)
T ss_dssp HHHHHTTTTSCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHH-CTHHHHTSSEEEEESCGGG
T ss_pred HHHHHHHhhCCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhh-cccccCCCcEEEEECCccc
Confidence 4444443 556889999999999999999887 45569999999999999999988764 00 02579999999976
Q ss_pred CCCCCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEcc
Q 018003 242 LPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIV 288 (362)
Q Consensus 242 ~p~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~~ 288 (362)
.+...++||+|++..+++++ ++++.++|||||++++.+...
T Consensus 145 ~~~~~~~fD~i~~~~~~~~~------~~~~~~~LkpgG~lv~~~~~~ 185 (226)
T 1i1n_A 145 GYAEEAPYDAIHVGAAAPVV------PQALIDQLKPGGRLILPVGPA 185 (226)
T ss_dssp CCGGGCCEEEEEECSBBSSC------CHHHHHTEEEEEEEEEEESCT
T ss_pred CcccCCCcCEEEECCchHHH------HHHHHHhcCCCcEEEEEEecC
Confidence 65556789999999998886 468899999999999987643
No 176
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.51 E-value=5.8e-14 Score=117.82 Aligned_cols=100 Identities=20% Similarity=0.231 Sum_probs=86.8
Q ss_pred CCCCCeEEEEcCccchHHHHHHHh-CCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC--------CC
Q 018003 175 PVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP--------FA 245 (362)
Q Consensus 175 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p--------~~ 245 (362)
..++.+|||+|||+|.++..+++. ++..+++|+|+++ +++ ..++.++++|+...+ ++
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~-------------~~~~~~~~~d~~~~~~~~~~~~~~~ 85 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDP-------------IVGVDFLQGDFRDELVMKALLERVG 85 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCC-------------CTTEEEEESCTTSHHHHHHHHHHHT
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-ccc-------------cCcEEEEEcccccchhhhhhhccCC
Confidence 456789999999999999999988 5667999999999 642 257899999998876 67
Q ss_pred CCcceEEEecccccCCCCH-----------HHHHHHHHhhccCCcEEEEEEEcc
Q 018003 246 SSSIDAVHAGAAIHCWSSP-----------STGVAEISRVLRPGGVFVGTTYIV 288 (362)
Q Consensus 246 ~~~fD~V~~~~vl~h~~d~-----------~~~l~~i~r~LkpgG~li~~~~~~ 288 (362)
+++||+|++..++++..++ ..+++++.++|||||.+++.++..
T Consensus 86 ~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 139 (180)
T 1ej0_A 86 DSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQG 139 (180)
T ss_dssp TCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESS
T ss_pred CCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecC
Confidence 7899999999999988777 789999999999999999988754
No 177
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.51 E-value=4.1e-14 Score=127.94 Aligned_cols=108 Identities=12% Similarity=0.174 Sum_probs=84.3
Q ss_pred CCCeEEEEcCccch----HHHHHHHh-CC---CCEEEEEeCCHHHHHHHHHHHhhc------------------C---CC
Q 018003 177 LGGNIIDASCGSGL----FSRIFAKS-GL---FSLVVALDYSENMLKQCYEFVQQE------------------S---NF 227 (362)
Q Consensus 177 ~~~~vLDiGcG~G~----~~~~l~~~-~~---~~~v~gvD~s~~~~~~a~~~~~~~------------------~---~~ 227 (362)
++.+|||+|||+|. ++..+++. +. +.+|+|+|+|+.|++.|++.+-.. . ++
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 35799999999998 45555554 21 248999999999999999864100 0 00
Q ss_pred -------CCCCEEEEEecCCCCCCC-CCcceEEEecccccCCCCH--HHHHHHHHhhccCCcEEEEE
Q 018003 228 -------PKENFLLVRADISRLPFA-SSSIDAVHAGAAIHCWSSP--STGVAEISRVLRPGGVFVGT 284 (362)
Q Consensus 228 -------~~~~~~~~~~d~~~~p~~-~~~fD~V~~~~vl~h~~d~--~~~l~~i~r~LkpgG~li~~ 284 (362)
...++.|.++|+...|++ .++||+|+|.++++|++++ .++++++.+.|||||+|++.
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred ceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 003689999999887665 5789999999999999766 68999999999999999873
No 178
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.51 E-value=1.9e-13 Score=128.67 Aligned_cols=125 Identities=20% Similarity=0.060 Sum_probs=101.2
Q ss_pred CCcHHHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEec
Q 018003 160 PGPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSG-LFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRAD 238 (362)
Q Consensus 160 ~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d 238 (362)
+-.+.....+.......++.+|||+|||+|.++..++..+ +...++|+|+++.+++.|+++++.. + ..++.+.++|
T Consensus 186 ~l~~~la~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~--g-~~~i~~~~~D 262 (354)
T 3tma_A 186 SLTPVLAQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALAS--G-LSWIRFLRAD 262 (354)
T ss_dssp SCCHHHHHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHT--T-CTTCEEEECC
T ss_pred CcCHHHHHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHc--C-CCceEEEeCC
Confidence 3345556677777777788999999999999999999876 6679999999999999999998876 1 2389999999
Q ss_pred CCCCCCCCCcceEEEecccccCCCC--------HHHHHHHHHhhccCCcEEEEEEEc
Q 018003 239 ISRLPFASSSIDAVHAGAAIHCWSS--------PSTGVAEISRVLRPGGVFVGTTYI 287 (362)
Q Consensus 239 ~~~~p~~~~~fD~V~~~~vl~h~~d--------~~~~l~~i~r~LkpgG~li~~~~~ 287 (362)
+.+++.+.+.||+|+++-....... ...+++++.++|||||.+++.+++
T Consensus 263 ~~~~~~~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~ 319 (354)
T 3tma_A 263 ARHLPRFFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLR 319 (354)
T ss_dssp GGGGGGTCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESC
T ss_pred hhhCccccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 9998877778999999755332111 257899999999999999998753
No 179
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.51 E-value=1.4e-13 Score=121.10 Aligned_cols=113 Identities=20% Similarity=0.247 Sum_probs=91.9
Q ss_pred HHHhhc--CCCCCCeEEEEcCccchHHHHHHHhC-----CCCEEEEEeCCHHHHHHHHHHHhhcCCC---CCCCEEEEEe
Q 018003 168 LMKGYL--KPVLGGNIIDASCGSGLFSRIFAKSG-----LFSLVVALDYSENMLKQCYEFVQQESNF---PKENFLLVRA 237 (362)
Q Consensus 168 ~l~~~l--~~~~~~~vLDiGcG~G~~~~~l~~~~-----~~~~v~gvD~s~~~~~~a~~~~~~~~~~---~~~~~~~~~~ 237 (362)
.+.+.+ ...++.+|||+|||+|.++..+++.. +..+|+|+|+++.+++.|++++... +. ...++.++.+
T Consensus 69 ~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~-~~~~~~~~~v~~~~~ 147 (227)
T 2pbf_A 69 LSLKRLINVLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRD-KPELLKIDNFKIIHK 147 (227)
T ss_dssp HHHHHHTTTSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHH-CGGGGSSTTEEEEEC
T ss_pred HHHHHHHhhCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHc-CccccccCCEEEEEC
Confidence 344444 34568899999999999999999875 4569999999999999999998775 00 0257999999
Q ss_pred cCCCCC----CCCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEc
Q 018003 238 DISRLP----FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 287 (362)
Q Consensus 238 d~~~~p----~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~ 287 (362)
|+.... ...++||+|++..+++|+ ++++.++|||||++++..+.
T Consensus 148 d~~~~~~~~~~~~~~fD~I~~~~~~~~~------~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 148 NIYQVNEEEKKELGLFDAIHVGASASEL------PEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp CGGGCCHHHHHHHCCEEEEEECSBBSSC------CHHHHHHEEEEEEEEEEEEE
T ss_pred ChHhcccccCccCCCcCEEEECCchHHH------HHHHHHhcCCCcEEEEEEcc
Confidence 997754 456789999999999886 47889999999999998764
No 180
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.50 E-value=4e-13 Score=117.47 Aligned_cols=134 Identities=12% Similarity=0.064 Sum_probs=105.3
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCC-CCCCC
Q 018003 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADIS-RLPFA 245 (362)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~-~~p~~ 245 (362)
+.+.+++.+ +.+|||||||+|.++..+++.++..+|+++|+++.+++.|+++++.. +...++.+..+|.. .++.
T Consensus 7 ~~l~~~v~~--g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~--gl~~~i~~~~~d~l~~l~~- 81 (225)
T 3kr9_A 7 ELVASFVSQ--GAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAH--GLKEKIQVRLANGLAAFEE- 81 (225)
T ss_dssp HHHHTTSCT--TEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHT--TCTTTEEEEECSGGGGCCG-
T ss_pred HHHHHhCCC--CCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc--CCCceEEEEECchhhhccc-
Confidence 456666654 78999999999999999999987778999999999999999999886 33457999999984 3432
Q ss_pred CCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhcccccccccccCCHHHHH
Q 018003 246 SSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVGFSIPVLGFDDLK 325 (362)
Q Consensus 246 ~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~ 325 (362)
...||+|+..+.-.. -...++.+....|+|+|+|++.. + .....++
T Consensus 82 ~~~~D~IviaG~Gg~--~i~~Il~~~~~~L~~~~~lVlq~-~-------------------------------~~~~~vr 127 (225)
T 3kr9_A 82 TDQVSVITIAGMGGR--LIARILEEGLGKLANVERLILQP-N-------------------------------NREDDLR 127 (225)
T ss_dssp GGCCCEEEEEEECHH--HHHHHHHHTGGGCTTCCEEEEEE-S-------------------------------SCHHHHH
T ss_pred CcCCCEEEEcCCChH--HHHHHHHHHHHHhCCCCEEEEEC-C-------------------------------CCHHHHH
Confidence 226999987654221 14578999999999999988742 1 1356799
Q ss_pred HHHHHCCCEEEEEE
Q 018003 326 RIFRQFQLVVNLKL 339 (362)
Q Consensus 326 ~ll~~~Gf~~v~~~ 339 (362)
++|.+.||.+++..
T Consensus 128 ~~L~~~Gf~i~~e~ 141 (225)
T 3kr9_A 128 IWLQDHGFQIVAES 141 (225)
T ss_dssp HHHHHTTEEEEEEE
T ss_pred HHHHHCCCEEEEEE
Confidence 99999999887764
No 181
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.50 E-value=1.3e-13 Score=121.88 Aligned_cols=119 Identities=17% Similarity=0.148 Sum_probs=95.8
Q ss_pred HHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCC-
Q 018003 164 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL- 242 (362)
Q Consensus 164 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~- 242 (362)
.....+...+...++.+|||+|||+|..+..+++..+..+++++|+++.+++.|++++... +...++.++.+|+...
T Consensus 41 ~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~ 118 (233)
T 2gpy_A 41 LGMESLLHLLKMAAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKAL--GLESRIELLFGDALQLG 118 (233)
T ss_dssp HHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHT--TCTTTEEEECSCGGGSH
T ss_pred HHHHHHHHHHhccCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHc--CCCCcEEEEECCHHHHH
Confidence 3344455555545678999999999999999999876679999999999999999998765 1235799999998764
Q ss_pred CCC--CCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEc
Q 018003 243 PFA--SSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 287 (362)
Q Consensus 243 p~~--~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~ 287 (362)
+.. +++||+|++....+ +...+++++.++|||||++++.+..
T Consensus 119 ~~~~~~~~fD~I~~~~~~~---~~~~~l~~~~~~L~pgG~lv~~~~~ 162 (233)
T 2gpy_A 119 EKLELYPLFDVLFIDAAKG---QYRRFFDMYSPMVRPGGLILSDNVL 162 (233)
T ss_dssp HHHTTSCCEEEEEEEGGGS---CHHHHHHHHGGGEEEEEEEEEETTT
T ss_pred HhcccCCCccEEEECCCHH---HHHHHHHHHHHHcCCCeEEEEEcCC
Confidence 433 57899999987753 7789999999999999999987543
No 182
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.50 E-value=3.2e-13 Score=120.20 Aligned_cols=115 Identities=12% Similarity=0.077 Sum_probs=96.5
Q ss_pred HHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC
Q 018003 164 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP 243 (362)
Q Consensus 164 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p 243 (362)
.....+...+...++.+|||+|||+|.++..+++.+ .+++++|+++.+++.|++++... +...++.+..+|+.+..
T Consensus 78 ~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~--~~~~~~~~~~~d~~~~~ 153 (248)
T 2yvl_A 78 KDSFYIALKLNLNKEKRVLEFGTGSGALLAVLSEVA--GEVWTFEAVEEFYKTAQKNLKKF--NLGKNVKFFNVDFKDAE 153 (248)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS--SEEEEECSCHHHHHHHHHHHHHT--TCCTTEEEECSCTTTSC
T ss_pred hhHHHHHHhcCCCCCCEEEEeCCCccHHHHHHHHhC--CEEEEEecCHHHHHHHHHHHHHc--CCCCcEEEEEcChhhcc
Confidence 334577777777788999999999999999999883 59999999999999999988765 12368999999998754
Q ss_pred CCCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEc
Q 018003 244 FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 287 (362)
Q Consensus 244 ~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~ 287 (362)
.++++||+|++ +.+++..+++++.++|||||++++.++.
T Consensus 154 ~~~~~~D~v~~-----~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 192 (248)
T 2yvl_A 154 VPEGIFHAAFV-----DVREPWHYLEKVHKSLMEGAPVGFLLPT 192 (248)
T ss_dssp CCTTCBSEEEE-----CSSCGGGGHHHHHHHBCTTCEEEEEESS
T ss_pred cCCCcccEEEE-----CCcCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 35678999997 4568889999999999999999998864
No 183
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.50 E-value=2.7e-13 Score=119.79 Aligned_cols=136 Identities=12% Similarity=0.044 Sum_probs=107.1
Q ss_pred HHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCC
Q 018003 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 245 (362)
Q Consensus 166 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~ 245 (362)
++.+.+++.+ +.+|||||||+|.++..+++.++..+|+++|+++.+++.|+++++.. +...++.+..+|......+
T Consensus 12 L~~i~~~v~~--g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~--gl~~~I~v~~gD~l~~~~~ 87 (244)
T 3gnl_A 12 LEKVASYITK--NERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSS--GLTEQIDVRKGNGLAVIEK 87 (244)
T ss_dssp HHHHHTTCCS--SEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHT--TCTTTEEEEECSGGGGCCG
T ss_pred HHHHHHhCCC--CCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc--CCCceEEEEecchhhccCc
Confidence 3566666665 78999999999999999999987678999999999999999999876 3345799999998776544
Q ss_pred CCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhcccccccccccCCHHHHH
Q 018003 246 SSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVGFSIPVLGFDDLK 325 (362)
Q Consensus 246 ~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~ 325 (362)
...||+|+..++.-. -...+|.+..+.|+++|+|++... .....++
T Consensus 88 ~~~~D~IviagmGg~--lI~~IL~~~~~~L~~~~~lIlq~~--------------------------------~~~~~lr 133 (244)
T 3gnl_A 88 KDAIDTIVIAGMGGT--LIRTILEEGAAKLAGVTKLILQPN--------------------------------IAAWQLR 133 (244)
T ss_dssp GGCCCEEEEEEECHH--HHHHHHHHTGGGGTTCCEEEEEES--------------------------------SCHHHHH
T ss_pred cccccEEEEeCCchH--HHHHHHHHHHHHhCCCCEEEEEcC--------------------------------CChHHHH
Confidence 446999887554321 234678899999999999997631 1356799
Q ss_pred HHHHHCCCEEEEEE
Q 018003 326 RIFRQFQLVVNLKL 339 (362)
Q Consensus 326 ~ll~~~Gf~~v~~~ 339 (362)
++|.+.||.+++..
T Consensus 134 ~~L~~~Gf~i~~E~ 147 (244)
T 3gnl_A 134 EWSEQNNWLITSEA 147 (244)
T ss_dssp HHHHHHTEEEEEEE
T ss_pred HHHHHCCCEEEEEE
Confidence 99999999876544
No 184
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.50 E-value=1.1e-13 Score=121.48 Aligned_cols=116 Identities=12% Similarity=0.055 Sum_probs=91.2
Q ss_pred HHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHhhcCCCCC-CCEEEEEecCCCC-
Q 018003 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSG-LFSLVVALDYSENMLKQCYEFVQQESNFPK-ENFLLVRADISRL- 242 (362)
Q Consensus 166 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~-~~~~~~~~d~~~~- 242 (362)
+..+....+..++.+|||+|||+|..+..+++.. ++++++++|+++.+++.|+++++.. +.. .++.++++|+.+.
T Consensus 45 l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--g~~~~~i~~~~gda~~~l 122 (221)
T 3dr5_A 45 LTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREA--GYSPSRVRFLLSRPLDVM 122 (221)
T ss_dssp HHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHT--TCCGGGEEEECSCHHHHG
T ss_pred HHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc--CCCcCcEEEEEcCHHHHH
Confidence 3444444454445699999999999999999864 3679999999999999999998875 223 5899999998654
Q ss_pred C-CCCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEE
Q 018003 243 P-FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 286 (362)
Q Consensus 243 p-~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~ 286 (362)
+ +++++||+|++.... .+...+++++.++|||||++++...
T Consensus 123 ~~~~~~~fD~V~~d~~~---~~~~~~l~~~~~~LkpGG~lv~dn~ 164 (221)
T 3dr5_A 123 SRLANDSYQLVFGQVSP---MDLKALVDAAWPLLRRGGALVLADA 164 (221)
T ss_dssp GGSCTTCEEEEEECCCT---TTHHHHHHHHHHHEEEEEEEEETTT
T ss_pred HHhcCCCcCeEEEcCcH---HHHHHHHHHHHHHcCCCcEEEEeCC
Confidence 2 336889999986542 4567789999999999999998543
No 185
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.50 E-value=3.6e-13 Score=120.34 Aligned_cols=110 Identities=14% Similarity=0.103 Sum_probs=88.7
Q ss_pred CCCCCCeEEEEcCccchHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCC-CCCC--CCcc
Q 018003 174 KPVLGGNIIDASCGSGLFSRIFAKSGL-FSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR-LPFA--SSSI 249 (362)
Q Consensus 174 ~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~-~p~~--~~~f 249 (362)
...++.+|||||||+|..+..+++..+ ..+|+++|+++.+++.|+++++.. +...++.++++|+.+ ++.. .++|
T Consensus 60 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~--g~~~~v~~~~~d~~~~l~~~~~~~~f 137 (248)
T 3tfw_A 60 RLTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLA--GVDQRVTLREGPALQSLESLGECPAF 137 (248)
T ss_dssp HHHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHT--TCTTTEEEEESCHHHHHHTCCSCCCC
T ss_pred hhcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc--CCCCcEEEEEcCHHHHHHhcCCCCCe
Confidence 334578999999999999999998855 679999999999999999998875 223589999999865 3322 3489
Q ss_pred eEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEcc
Q 018003 250 DAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIV 288 (362)
Q Consensus 250 D~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~~ 288 (362)
|+|++... ..+...+++++.++|||||++++.....
T Consensus 138 D~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~~~~~~ 173 (248)
T 3tfw_A 138 DLIFIDAD---KPNNPHYLRWALRYSRPGTLIIGDNVVR 173 (248)
T ss_dssp SEEEECSC---GGGHHHHHHHHHHTCCTTCEEEEECCSG
T ss_pred EEEEECCc---hHHHHHHHHHHHHhcCCCeEEEEeCCCc
Confidence 99998653 3456789999999999999999876543
No 186
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.48 E-value=1.1e-12 Score=118.77 Aligned_cols=106 Identities=18% Similarity=0.164 Sum_probs=90.6
Q ss_pred CCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCCCCcceEEEe
Q 018003 175 PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHA 254 (362)
Q Consensus 175 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~~~~fD~V~~ 254 (362)
..++.+|||+|||+|.++..+++.++..+|+|+|+++.+++.|+++++.+ ...++.++++|+...+. .++||+|++
T Consensus 117 ~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n---~l~~~~~~~~d~~~~~~-~~~~D~Vi~ 192 (272)
T 3a27_A 117 SNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLN---KLNNVIPILADNRDVEL-KDVADRVIM 192 (272)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHT---TCSSEEEEESCGGGCCC-TTCEEEEEE
T ss_pred cCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHc---CCCCEEEEECChHHcCc-cCCceEEEE
Confidence 44578999999999999999999866679999999999999999998876 23578999999987743 578999998
Q ss_pred cccccCCCCHHHHHHHHHhhccCCcEEEEEEEcc
Q 018003 255 GAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIV 288 (362)
Q Consensus 255 ~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~~ 288 (362)
.... +...++.++.+.|||||++++++...
T Consensus 193 d~p~----~~~~~l~~~~~~LkpgG~l~~s~~~~ 222 (272)
T 3a27_A 193 GYVH----KTHKFLDKTFEFLKDRGVIHYHETVA 222 (272)
T ss_dssp CCCS----SGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred CCcc----cHHHHHHHHHHHcCCCCEEEEEEcCc
Confidence 7653 66788999999999999999887654
No 187
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.47 E-value=2.9e-13 Score=125.98 Aligned_cols=119 Identities=13% Similarity=0.094 Sum_probs=90.9
Q ss_pred HHHHHhhcC-CCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCC
Q 018003 166 FELMKGYLK-PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF 244 (362)
Q Consensus 166 ~~~l~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~ 244 (362)
...+.+.+. ..++.+|||+|||+|.++..++..+. +|+++|+|+.+++.|+++++.. +....++.++++|+.++..
T Consensus 141 ~~~l~~~~~~~~~~~~VLDlgcGtG~~sl~la~~ga--~V~~VD~s~~al~~a~~n~~~~-gl~~~~v~~i~~D~~~~l~ 217 (332)
T 2igt_A 141 WEWLKNAVETADRPLKVLNLFGYTGVASLVAAAAGA--EVTHVDASKKAIGWAKENQVLA-GLEQAPIRWICEDAMKFIQ 217 (332)
T ss_dssp HHHHHHHHHHSSSCCEEEEETCTTCHHHHHHHHTTC--EEEEECSCHHHHHHHHHHHHHH-TCTTSCEEEECSCHHHHHH
T ss_pred HHHHHHHHHhcCCCCcEEEcccccCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHHc-CCCccceEEEECcHHHHHH
Confidence 344555543 34577999999999999999999876 9999999999999999998876 1111259999999876431
Q ss_pred C----CCcceEEEeccc----------ccCCCCHHHHHHHHHhhccCCcEEEEEEEc
Q 018003 245 A----SSSIDAVHAGAA----------IHCWSSPSTGVAEISRVLRPGGVFVGTTYI 287 (362)
Q Consensus 245 ~----~~~fD~V~~~~v----------l~h~~d~~~~l~~i~r~LkpgG~li~~~~~ 287 (362)
. .++||+|++.-- +++..+...+++++.++|||||++++....
T Consensus 218 ~~~~~~~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~ 274 (332)
T 2igt_A 218 REERRGSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAY 274 (332)
T ss_dssp HHHHHTCCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEEC
T ss_pred HHHhcCCCceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECC
Confidence 1 468999998432 233345678999999999999998887654
No 188
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.47 E-value=3.2e-13 Score=118.93 Aligned_cols=114 Identities=19% Similarity=0.322 Sum_probs=89.5
Q ss_pred HHHHhhc--CCCCCCeEEEEcCccchHHHHHHHhCC------CCEEEEEeCCHHHHHHHHHHHhhcCC--CCCCCEEEEE
Q 018003 167 ELMKGYL--KPVLGGNIIDASCGSGLFSRIFAKSGL------FSLVVALDYSENMLKQCYEFVQQESN--FPKENFLLVR 236 (362)
Q Consensus 167 ~~l~~~l--~~~~~~~vLDiGcG~G~~~~~l~~~~~------~~~v~gvD~s~~~~~~a~~~~~~~~~--~~~~~~~~~~ 236 (362)
..+.+.+ ...++.+|||+|||+|.++..+++... ..+|+++|+++.+++.|++++..... ....++.++.
T Consensus 72 ~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~ 151 (227)
T 1r18_A 72 AFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVE 151 (227)
T ss_dssp HHHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEE
T ss_pred HHHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEE
Confidence 3445555 345688999999999999999887532 24899999999999999998765300 0025799999
Q ss_pred ecCCCCCCCC-CcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEc
Q 018003 237 ADISRLPFAS-SSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 287 (362)
Q Consensus 237 ~d~~~~p~~~-~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~ 287 (362)
+|... ++++ ++||+|++..+++|+. +++.++|||||++++....
T Consensus 152 ~d~~~-~~~~~~~fD~I~~~~~~~~~~------~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 152 GDGRK-GYPPNAPYNAIHVGAAAPDTP------TELINQLASGGRLIVPVGP 196 (227)
T ss_dssp SCGGG-CCGGGCSEEEEEECSCBSSCC------HHHHHTEEEEEEEEEEESC
T ss_pred CCccc-CCCcCCCccEEEECCchHHHH------HHHHHHhcCCCEEEEEEec
Confidence 99876 4444 7899999999999874 7889999999999998754
No 189
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.47 E-value=6.6e-14 Score=124.23 Aligned_cols=99 Identities=16% Similarity=0.112 Sum_probs=82.1
Q ss_pred CCCeEEEEcCccchHHHHHHHh----CCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCC---CCCC-Cc
Q 018003 177 LGGNIIDASCGSGLFSRIFAKS----GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL---PFAS-SS 248 (362)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~----~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~---p~~~-~~ 248 (362)
++.+|||||||+|..+..+++. ++..+|+|+|+++.+++.|+. . ..++.++++|+... +... .+
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~----~----~~~v~~~~gD~~~~~~l~~~~~~~ 152 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPAS----D----MENITLHQGDCSDLTTFEHLREMA 152 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGG----G----CTTEEEEECCSSCSGGGGGGSSSC
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhc----c----CCceEEEECcchhHHHHHhhccCC
Confidence 4679999999999999999887 566799999999999988872 1 36899999999884 5433 47
Q ss_pred ceEEEecccccCCCCHHHHHHHHHh-hccCCcEEEEEEE
Q 018003 249 IDAVHAGAAIHCWSSPSTGVAEISR-VLRPGGVFVGTTY 286 (362)
Q Consensus 249 fD~V~~~~vl~h~~d~~~~l~~i~r-~LkpgG~li~~~~ 286 (362)
||+|++... | .+...+++++.+ +|||||++++.+.
T Consensus 153 fD~I~~d~~--~-~~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 153 HPLIFIDNA--H-ANTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp SSEEEEESS--C-SSHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred CCEEEECCc--h-HhHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 999998665 4 378889999997 9999999998643
No 190
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.46 E-value=2.3e-13 Score=121.67 Aligned_cols=120 Identities=18% Similarity=0.097 Sum_probs=88.1
Q ss_pred HHHHHhhcCCCCCCeEEEEcCccchHHHHHHHh--CCCCEEEEEeCCHHHHHHHHHHHhhcCC-CCCCC-----------
Q 018003 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKS--GLFSLVVALDYSENMLKQCYEFVQQESN-FPKEN----------- 231 (362)
Q Consensus 166 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~--~~~~~v~gvD~s~~~~~~a~~~~~~~~~-~~~~~----------- 231 (362)
+..+.+.+...++.+|||+|||+|.++..+++. .+..+|+|+|+|+.+++.|++++..... ....+
T Consensus 40 ~~~~l~~~~~~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (250)
T 1o9g_A 40 FQRALARLPGDGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERF 119 (250)
T ss_dssp HHHHHHTSSCCSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcccCCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhc
Confidence 344455554445779999999999999999887 4445899999999999999987653200 00001
Q ss_pred --------------EE-------------EEEecCCCCCC-----CCCcceEEEecccccCCCC---------HHHHHHH
Q 018003 232 --------------FL-------------LVRADISRLPF-----ASSSIDAVHAGAAIHCWSS---------PSTGVAE 270 (362)
Q Consensus 232 --------------~~-------------~~~~d~~~~p~-----~~~~fD~V~~~~vl~h~~d---------~~~~l~~ 270 (362)
+. +.++|+..... ...+||+|+++..+.+..+ ...++++
T Consensus 120 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~ 199 (250)
T 1o9g_A 120 GKPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRS 199 (250)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHH
T ss_pred ccccchhhhhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHH
Confidence 55 99999877431 3448999999876655443 3489999
Q ss_pred HHhhccCCcEEEEEE
Q 018003 271 ISRVLRPGGVFVGTT 285 (362)
Q Consensus 271 i~r~LkpgG~li~~~ 285 (362)
+.++|||||++++..
T Consensus 200 ~~~~LkpgG~l~~~~ 214 (250)
T 1o9g_A 200 LASALPAHAVIAVTD 214 (250)
T ss_dssp HHHHSCTTCEEEEEE
T ss_pred HHHhcCCCcEEEEeC
Confidence 999999999999843
No 191
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.46 E-value=6.7e-14 Score=139.74 Aligned_cols=106 Identities=18% Similarity=0.259 Sum_probs=90.5
Q ss_pred CCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCC--CCCCCcceEEEec
Q 018003 178 GGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL--PFASSSIDAVHAG 255 (362)
Q Consensus 178 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~--p~~~~~fD~V~~~ 255 (362)
+.+|||||||.|.++..+++.|. +|+|||+++.+++.|+...... +..++.+.+++++++ ++.+++||+|+++
T Consensus 67 ~~~vLDvGCG~G~~~~~la~~ga--~V~giD~~~~~i~~a~~~a~~~---~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~ 141 (569)
T 4azs_A 67 PLNVLDLGCAQGFFSLSLASKGA--TIVGIDFQQENINVCRALAEEN---PDFAAEFRVGRIEEVIAALEEGEFDLAIGL 141 (569)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHTS---TTSEEEEEECCHHHHHHHCCTTSCSEEEEE
T ss_pred CCeEEEECCCCcHHHHHHHhCCC--EEEEECCCHHHHHHHHHHHHhc---CCCceEEEECCHHHHhhhccCCCccEEEEC
Confidence 67999999999999999999987 9999999999999999988765 135799999999887 4567899999999
Q ss_pred ccccCCCCHHH--HHHHHHhhccCCcEEEEEEEcc
Q 018003 256 AAIHCWSSPST--GVAEISRVLRPGGVFVGTTYIV 288 (362)
Q Consensus 256 ~vl~h~~d~~~--~l~~i~r~LkpgG~li~~~~~~ 288 (362)
.+|||++||.. .+..+.+.|+++|..++.....
T Consensus 142 e~~ehv~~~~~~~~~~~~~~tl~~~~~~~~~~~~~ 176 (569)
T 4azs_A 142 SVFHHIVHLHGIDEVKRLLSRLADVTQAVILELAV 176 (569)
T ss_dssp SCHHHHHHHHCHHHHHHHHHHHHHHSSEEEEECCC
T ss_pred cchhcCCCHHHHHHHHHHHHHhccccceeeEEecc
Confidence 99999999863 3556777888988877776554
No 192
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.46 E-value=1.4e-12 Score=114.35 Aligned_cols=110 Identities=15% Similarity=0.091 Sum_probs=87.7
Q ss_pred CCCCCCeEEEEcCccchHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCC-C-CC---CC
Q 018003 174 KPVLGGNIIDASCGSGLFSRIFAKSGL-FSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-P-FA---SS 247 (362)
Q Consensus 174 ~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~-p-~~---~~ 247 (362)
...++.+|||||||+|..+..+++..+ ..+++++|+++.+++.|++++... +...++.++++|+... + +. .+
T Consensus 55 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~~~~~~~~~~ 132 (223)
T 3duw_A 55 QIQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERA--NLNDRVEVRTGLALDSLQQIENEKYE 132 (223)
T ss_dssp HHHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHT--TCTTTEEEEESCHHHHHHHHHHTTCC
T ss_pred HhhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc--CCCCcEEEEEcCHHHHHHHHHhcCCC
Confidence 334578999999999999999999855 579999999999999999998765 2234699999998653 1 11 15
Q ss_pred cceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEcc
Q 018003 248 SIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIV 288 (362)
Q Consensus 248 ~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~~ 288 (362)
+||+|++.... .+...+++++.++|||||++++.....
T Consensus 133 ~fD~v~~d~~~---~~~~~~l~~~~~~L~pgG~lv~~~~~~ 170 (223)
T 3duw_A 133 PFDFIFIDADK---QNNPAYFEWALKLSRPGTVIIGDNVVR 170 (223)
T ss_dssp CCSEEEECSCG---GGHHHHHHHHHHTCCTTCEEEEESCSG
T ss_pred CcCEEEEcCCc---HHHHHHHHHHHHhcCCCcEEEEeCCCc
Confidence 79999987653 345688999999999999888865543
No 193
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.45 E-value=1.8e-13 Score=118.98 Aligned_cols=105 Identities=14% Similarity=0.119 Sum_probs=85.9
Q ss_pred CCCeEEEEcCccchHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCC-CCCCCcceEEEe
Q 018003 177 LGGNIIDASCGSGLFSRIFAKSGL-FSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-PFASSSIDAVHA 254 (362)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~-p~~~~~fD~V~~ 254 (362)
++.+|||+|||+|..+..+++..+ ..+++++|+++.+++.|+++++.. +...++.++.+|+... +..++ ||+|++
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~~~~~~-fD~v~~ 132 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDN--GLIDRVELQVGDPLGIAAGQRD-IDILFM 132 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHH--SGGGGEEEEESCHHHHHTTCCS-EEEEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHC--CCCceEEEEEecHHHHhccCCC-CCEEEE
Confidence 467999999999999999998754 679999999999999999988765 1134699999998653 44446 999998
Q ss_pred cccccCCCCHHHHHHHHHhhccCCcEEEEEEEc
Q 018003 255 GAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 287 (362)
Q Consensus 255 ~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~ 287 (362)
... ..+...+++++.++|||||++++....
T Consensus 133 ~~~---~~~~~~~l~~~~~~LkpgG~lv~~~~~ 162 (210)
T 3c3p_A 133 DCD---VFNGADVLERMNRCLAKNALLIAVNAL 162 (210)
T ss_dssp ETT---TSCHHHHHHHHGGGEEEEEEEEEESSS
T ss_pred cCC---hhhhHHHHHHHHHhcCCCeEEEEECcc
Confidence 743 357789999999999999999986543
No 194
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.45 E-value=1.3e-12 Score=126.73 Aligned_cols=119 Identities=18% Similarity=0.213 Sum_probs=97.4
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCC-CEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC--
Q 018003 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLF-SLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-- 243 (362)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p-- 243 (362)
..+...+.+.++.+|||+|||+|..+..+++..++ ++++++|+++.+++.++++++.. +..++.++++|+..++
T Consensus 249 ~l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~---g~~~v~~~~~D~~~~~~~ 325 (450)
T 2yxl_A 249 AVASIVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRM---GIKIVKPLVKDARKAPEI 325 (450)
T ss_dssp HHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHT---TCCSEEEECSCTTCCSSS
T ss_pred HHHHHhcCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHc---CCCcEEEEEcChhhcchh
Confidence 34455667778899999999999999999987544 69999999999999999998876 2357999999998876
Q ss_pred CCCCcceEEEe------cccccCCCCH----------------HHHHHHHHhhccCCcEEEEEEEcc
Q 018003 244 FASSSIDAVHA------GAAIHCWSSP----------------STGVAEISRVLRPGGVFVGTTYIV 288 (362)
Q Consensus 244 ~~~~~fD~V~~------~~vl~h~~d~----------------~~~l~~i~r~LkpgG~li~~~~~~ 288 (362)
+++++||+|++ ..++++.++. ..+|+++.++|||||++++++...
T Consensus 326 ~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~ 392 (450)
T 2yxl_A 326 IGEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSI 392 (450)
T ss_dssp SCSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred hccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 55578999996 3455655553 578999999999999999988654
No 195
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.45 E-value=5.2e-13 Score=114.99 Aligned_cols=99 Identities=15% Similarity=0.283 Sum_probs=80.0
Q ss_pred CCCCCeEEEEcCccchHHHHHHHhCC--CCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC---------
Q 018003 175 PVLGGNIIDASCGSGLFSRIFAKSGL--FSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP--------- 243 (362)
Q Consensus 175 ~~~~~~vLDiGcG~G~~~~~l~~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p--------- 243 (362)
..++.+|||+|||+|.++..+++..+ ..+|+|+|+++.. . ..++.++++|+...+
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~----------~----~~~v~~~~~d~~~~~~~~~~~~~~ 85 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD----------P----IPNVYFIQGEIGKDNMNNIKNINY 85 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC----------C----CTTCEEEECCTTTTSSCCC-----
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC----------C----CCCceEEEccccchhhhhhccccc
Confidence 34578999999999999999998865 5799999999831 1 357899999998876
Q ss_pred ----------------CCCCcceEEEecccccCCC----CHH-------HHHHHHHhhccCCcEEEEEEEc
Q 018003 244 ----------------FASSSIDAVHAGAAIHCWS----SPS-------TGVAEISRVLRPGGVFVGTTYI 287 (362)
Q Consensus 244 ----------------~~~~~fD~V~~~~vl~h~~----d~~-------~~l~~i~r~LkpgG~li~~~~~ 287 (362)
+++++||+|++..++++.. |.. .+++++.++|||||.+++.++.
T Consensus 86 i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 156 (201)
T 2plw_A 86 IDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYL 156 (201)
T ss_dssp ------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeC
Confidence 5667999999988877642 222 3789999999999999987764
No 196
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.44 E-value=4.5e-13 Score=117.57 Aligned_cols=108 Identities=13% Similarity=0.081 Sum_probs=86.8
Q ss_pred CCCCeEEEEcCccchHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCC-C-CCC----Cc
Q 018003 176 VLGGNIIDASCGSGLFSRIFAKSGL-FSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-P-FAS----SS 248 (362)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~-p-~~~----~~ 248 (362)
.++.+|||+|||+|..+..+++..+ ..+|+++|+++.+++.|+++++.. +...++.++++|+... + +.. ++
T Consensus 63 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 140 (225)
T 3tr6_A 63 MQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKA--GLSDKIGLRLSPAKDTLAELIHAGQAWQ 140 (225)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHT--TCTTTEEEEESCHHHHHHHHHTTTCTTC
T ss_pred hCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHC--CCCCceEEEeCCHHHHHHHhhhccCCCC
Confidence 3567999999999999999998754 579999999999999999998775 2235699999998543 2 111 78
Q ss_pred ceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEcc
Q 018003 249 IDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIV 288 (362)
Q Consensus 249 fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~~ 288 (362)
||+|++... ..+...+++++.++|||||++++.....
T Consensus 141 fD~v~~~~~---~~~~~~~l~~~~~~L~pgG~lv~~~~~~ 177 (225)
T 3tr6_A 141 YDLIYIDAD---KANTDLYYEESLKLLREGGLIAVDNVLR 177 (225)
T ss_dssp EEEEEECSC---GGGHHHHHHHHHHHEEEEEEEEEECSSG
T ss_pred ccEEEECCC---HHHHHHHHHHHHHhcCCCcEEEEeCCCc
Confidence 999997554 2356789999999999999999876543
No 197
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.44 E-value=3.2e-12 Score=120.99 Aligned_cols=153 Identities=14% Similarity=0.081 Sum_probs=112.1
Q ss_pred cHHHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCC
Q 018003 162 PEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR 241 (362)
Q Consensus 162 ~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~ 241 (362)
.+.....+.... ..++.+|||+|||+|.++..++..+...+++|+|+|+.+++.|+++++.. +...++.+.++|+..
T Consensus 203 ~~~la~~l~~~~-~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~--gl~~~i~~~~~D~~~ 279 (373)
T 3tm4_A 203 KASIANAMIELA-ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAA--GVLDKIKFIQGDATQ 279 (373)
T ss_dssp CHHHHHHHHHHH-TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHT--TCGGGCEEEECCGGG
T ss_pred cHHHHHHHHHhh-cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHc--CCCCceEEEECChhh
Confidence 344555566665 66788999999999999999999876668999999999999999998876 223589999999999
Q ss_pred CCCCCCcceEEEecccccCC-------CCH-HHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhcccccc
Q 018003 242 LPFASSSIDAVHAGAAIHCW-------SSP-STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVG 313 (362)
Q Consensus 242 ~p~~~~~fD~V~~~~vl~h~-------~d~-~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (362)
+++++++||+|+++-....- .+. ..+++++.++| ||.+++.+.
T Consensus 280 ~~~~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~--------------------------- 330 (373)
T 3tm4_A 280 LSQYVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITT--------------------------- 330 (373)
T ss_dssp GGGTCSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE--EEEEEEEES---------------------------
T ss_pred CCcccCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEEC---------------------------
Confidence 98888899999997553221 111 56788899988 555554432
Q ss_pred cccccCCHHHHHHHHHHCCCEEEEEEE--ecee-EEEEeeCc
Q 018003 314 FSIPVLGFDDLKRIFRQFQLVVNLKLF--YGHI-QHYIVKIP 352 (362)
Q Consensus 314 ~~~~~~s~~~l~~ll~~~Gf~~v~~~~--~g~~-~~~~~~kp 352 (362)
+.+.+++.+.+.||+..+... .|.. ..+...+|
T Consensus 331 ------~~~~~~~~~~~~G~~~~~~~~~~nG~l~~~~~~~~~ 366 (373)
T 3tm4_A 331 ------EKKAIEEAIAENGFEIIHHRVIGHGGLMVHLYVVKL 366 (373)
T ss_dssp ------CHHHHHHHHHHTTEEEEEEEEEEETTEEEEEEEEEE
T ss_pred ------CHHHHHHHHHHcCCEEEEEEEEEcCCEEEEEEeccC
Confidence 234677889999997765433 3433 44444443
No 198
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.44 E-value=1.7e-13 Score=122.10 Aligned_cols=110 Identities=10% Similarity=0.034 Sum_probs=89.0
Q ss_pred CCCCCeEEEEcCccchHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCC-CCC-----CC
Q 018003 175 PVLGGNIIDASCGSGLFSRIFAKSGL-FSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-PFA-----SS 247 (362)
Q Consensus 175 ~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~-p~~-----~~ 247 (362)
..++.+|||||||+|..+..+++..+ +++|+++|+++.+++.|+++++.. +...++.++++|+... +.. .+
T Consensus 58 ~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~--g~~~~i~~~~gda~~~l~~~~~~~~~~ 135 (242)
T 3r3h_A 58 LTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREA--KQEHKIKLRLGPALDTLHSLLNEGGEH 135 (242)
T ss_dssp HHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHT--TCTTTEEEEESCHHHHHHHHHHHHCSS
T ss_pred hcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc--CCCCcEEEEEcCHHHHHHHHhhccCCC
Confidence 34467999999999999999998753 679999999999999999998875 2245899999998654 211 47
Q ss_pred cceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEccC
Q 018003 248 SIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVD 289 (362)
Q Consensus 248 ~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~~~ 289 (362)
+||+|++... ..+...+++++.++|||||++++......
T Consensus 136 ~fD~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~d~~~~~ 174 (242)
T 3r3h_A 136 QFDFIFIDAD---KTNYLNYYELALKLVTPKGLIAIDNIFWD 174 (242)
T ss_dssp CEEEEEEESC---GGGHHHHHHHHHHHEEEEEEEEEECSSSS
T ss_pred CEeEEEEcCC---hHHhHHHHHHHHHhcCCCeEEEEECCccC
Confidence 8999998765 23567889999999999999998765543
No 199
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.44 E-value=4.7e-13 Score=130.56 Aligned_cols=114 Identities=15% Similarity=0.248 Sum_probs=93.2
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCCC
Q 018003 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 246 (362)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~~ 246 (362)
+.+.+.+...++.+|||||||+|.++..+++.+ ..+|+|+|+|+ +++.|+++++.. +...++.++.+|+.+++++
T Consensus 148 ~~il~~l~~~~~~~VLDiGcGtG~la~~la~~~-~~~V~gvD~s~-~l~~A~~~~~~~--gl~~~v~~~~~d~~~~~~~- 222 (480)
T 3b3j_A 148 RAILQNHTDFKDKIVLDVGCGSGILSFFAAQAG-ARKIYAVEAST-MAQHAEVLVKSN--NLTDRIVVIPGKVEEVSLP- 222 (480)
T ss_dssp HHHHHTGGGTTTCEEEEESCSTTHHHHHHHHTT-CSEEEEEECHH-HHHHHHHHHHHT--TCTTTEEEEESCTTTCCCS-
T ss_pred HHHHHhhhhcCCCEEEEecCcccHHHHHHHHcC-CCEEEEEEcHH-HHHHHHHHHHHc--CCCCcEEEEECchhhCccC-
Confidence 445555555567899999999999999988864 46999999998 999999988765 2246899999999987765
Q ss_pred CcceEEEecccccCCCCH--HHHHHHHHhhccCCcEEEEEE
Q 018003 247 SSIDAVHAGAAIHCWSSP--STGVAEISRVLRPGGVFVGTT 285 (362)
Q Consensus 247 ~~fD~V~~~~vl~h~~d~--~~~l~~i~r~LkpgG~li~~~ 285 (362)
++||+|++..+++|+.+. ...+.++.++|||||++++..
T Consensus 223 ~~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~~~ 263 (480)
T 3b3j_A 223 EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTI 263 (480)
T ss_dssp SCEEEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEESCE
T ss_pred CCeEEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 579999999888887654 467889999999999998643
No 200
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.43 E-value=6.7e-13 Score=124.92 Aligned_cols=102 Identities=21% Similarity=0.339 Sum_probs=86.3
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCCCCcceEEEe--
Q 018003 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHA-- 254 (362)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~~~~fD~V~~-- 254 (362)
++++|||||||+|.++..+++.|. .+|+|+|.|+ +++.|++.++.+ +...++.++.+|++++.++ ++||+|++
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa~aGA-~~V~ave~s~-~~~~a~~~~~~n--~~~~~i~~i~~~~~~~~lp-e~~DvivsE~ 157 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCAQAGA-RRVYAVEASA-IWQQAREVVRFN--GLEDRVHVLPGPVETVELP-EQVDAIVSEW 157 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC-SEEEEEECST-THHHHHHHHHHT--TCTTTEEEEESCTTTCCCS-SCEEEEECCC
T ss_pred CCCEEEEeCCCccHHHHHHHHhCC-CEEEEEeChH-HHHHHHHHHHHc--CCCceEEEEeeeeeeecCC-ccccEEEeec
Confidence 578999999999999998888874 5899999996 889999888775 4467899999999998776 67999998
Q ss_pred -cccccCCCCHHHHHHHHHhhccCCcEEEE
Q 018003 255 -GAAIHCWSSPSTGVAEISRVLRPGGVFVG 283 (362)
Q Consensus 255 -~~vl~h~~d~~~~l~~i~r~LkpgG~li~ 283 (362)
...+.+-.....++....|+|||||.++-
T Consensus 158 ~~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 158 MGYGLLHESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp CBTTBTTTCSHHHHHHHHHHHEEEEEEEES
T ss_pred ccccccccchhhhHHHHHHhhCCCCceECC
Confidence 34456656778899999999999999873
No 201
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.43 E-value=7.1e-13 Score=120.82 Aligned_cols=117 Identities=15% Similarity=0.136 Sum_probs=90.4
Q ss_pred HHHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCC
Q 018003 163 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL 242 (362)
Q Consensus 163 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~ 242 (362)
+...+.+.+.+...++.+|||+|||+|.++..++.. +..+|+|+|+|+.+++.|++++... +...++.++++|+...
T Consensus 109 e~lv~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~-~~~~v~~vDis~~al~~A~~n~~~~--~l~~~v~~~~~D~~~~ 185 (284)
T 1nv8_A 109 EELVELALELIRKYGIKTVADIGTGSGAIGVSVAKF-SDAIVFATDVSSKAVEIARKNAERH--GVSDRFFVRKGEFLEP 185 (284)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHH-SSCEEEEEESCHHHHHHHHHHHHHT--TCTTSEEEEESSTTGG
T ss_pred HHHHHHHHHHhcccCCCEEEEEeCchhHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHc--CCCCceEEEECcchhh
Confidence 344555555554335679999999999999999998 6779999999999999999998875 2223599999999763
Q ss_pred CCCCCcc---eEEEec------------ccccCCC--------CHHHHHHHHH-hhccCCcEEEEEE
Q 018003 243 PFASSSI---DAVHAG------------AAIHCWS--------SPSTGVAEIS-RVLRPGGVFVGTT 285 (362)
Q Consensus 243 p~~~~~f---D~V~~~------------~vl~h~~--------d~~~~l~~i~-r~LkpgG~li~~~ 285 (362)
++ ++| |+|+++ .+. |.+ |...+++++. +.|+|||++++..
T Consensus 186 -~~-~~f~~~D~IvsnPPyi~~~~~l~~~v~-~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~ 249 (284)
T 1nv8_A 186 -FK-EKFASIEMILSNPPYVKSSAHLPKDVL-FEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEI 249 (284)
T ss_dssp -GG-GGTTTCCEEEECCCCBCGGGSCTTSCC-CSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEEC
T ss_pred -cc-cccCCCCEEEEcCCCCCcccccChhhc-cCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEE
Confidence 22 578 999997 222 322 2237899999 9999999999864
No 202
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.43 E-value=1.7e-12 Score=125.30 Aligned_cols=121 Identities=20% Similarity=0.183 Sum_probs=98.9
Q ss_pred HHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC
Q 018003 164 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP 243 (362)
Q Consensus 164 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p 243 (362)
.....+...+.+.++.+|||+|||+|..+..+++.++.++++++|+++.+++.++++++.. ..++.++++|+..++
T Consensus 233 ~~s~~~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~----g~~~~~~~~D~~~~~ 308 (429)
T 1sqg_A 233 ASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRL----GMKATVKQGDGRYPS 308 (429)
T ss_dssp HHHHTHHHHHCCCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHT----TCCCEEEECCTTCTH
T ss_pred HHHHHHHHHcCCCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHc----CCCeEEEeCchhhch
Confidence 3334555667778899999999999999999999876679999999999999999998876 335789999998876
Q ss_pred --CCCCcceEEEe------cccccCCCCH----------------HHHHHHHHhhccCCcEEEEEEEcc
Q 018003 244 --FASSSIDAVHA------GAAIHCWSSP----------------STGVAEISRVLRPGGVFVGTTYIV 288 (362)
Q Consensus 244 --~~~~~fD~V~~------~~vl~h~~d~----------------~~~l~~i~r~LkpgG~li~~~~~~ 288 (362)
+++++||+|++ ..++.+.++. ..+|+++.++|||||++++++...
T Consensus 309 ~~~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~ 377 (429)
T 1sqg_A 309 QWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSV 377 (429)
T ss_dssp HHHTTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCC
T ss_pred hhcccCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 55678999996 2455555553 378999999999999999988543
No 203
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.43 E-value=2.2e-13 Score=123.57 Aligned_cols=117 Identities=16% Similarity=0.102 Sum_probs=92.9
Q ss_pred HHhhcCCCCCCeEEEEcCccchHHHHHHHhCCC-CEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCC---
Q 018003 169 MKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLF-SLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF--- 244 (362)
Q Consensus 169 l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~--- 244 (362)
+...+...++.+|||+|||+|..+..+++..++ .+|+|+|+++.+++.++++++.. +..++.++++|+..++.
T Consensus 75 ~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~---g~~~v~~~~~D~~~~~~~~~ 151 (274)
T 3ajd_A 75 PPIVLNPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRM---GVLNTIIINADMRKYKDYLL 151 (274)
T ss_dssp HHHHHCCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHT---TCCSEEEEESCHHHHHHHHH
T ss_pred HHHHhCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHh---CCCcEEEEeCChHhcchhhh
Confidence 344566778899999999999999999986443 69999999999999999998876 13489999999987654
Q ss_pred -CCCcceEEEec------cccc------------CCCCHHHHHHHHHhhccCCcEEEEEEEcc
Q 018003 245 -ASSSIDAVHAG------AAIH------------CWSSPSTGVAEISRVLRPGGVFVGTTYIV 288 (362)
Q Consensus 245 -~~~~fD~V~~~------~vl~------------h~~d~~~~l~~i~r~LkpgG~li~~~~~~ 288 (362)
..++||+|++. .++. +......+++++.++|||||++++++...
T Consensus 152 ~~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~ 214 (274)
T 3ajd_A 152 KNEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSM 214 (274)
T ss_dssp HTTCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred hccccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCC
Confidence 25789999986 2222 12355789999999999999999988654
No 204
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.42 E-value=2.6e-13 Score=127.32 Aligned_cols=111 Identities=17% Similarity=0.143 Sum_probs=87.1
Q ss_pred HHHHHHHHhhcCCCCCCeEEEEcCc------cchHHHHHHHh-CCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEE
Q 018003 163 EKEFELMKGYLKPVLGGNIIDASCG------SGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLV 235 (362)
Q Consensus 163 ~~~~~~l~~~l~~~~~~~vLDiGcG------~G~~~~~l~~~-~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~ 235 (362)
...++.++..+.. ++.+||||||| +|..+..+++. .+..+|+|+|+|+.|.. . ..++.++
T Consensus 203 ~~~Ye~lL~~l~~-~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~~--------~----~~rI~fv 269 (419)
T 3sso_A 203 TPHYDRHFRDYRN-QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSHV--------D----ELRIRTI 269 (419)
T ss_dssp HHHHHHHHGGGTT-SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGGG--------C----BTTEEEE
T ss_pred HHHHHHHHHhhcC-CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHhh--------c----CCCcEEE
Confidence 3445555555443 36799999999 65555555544 56789999999999731 1 4689999
Q ss_pred EecCCCCCCC------CCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEc
Q 018003 236 RADISRLPFA------SSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 287 (362)
Q Consensus 236 ~~d~~~~p~~------~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~ 287 (362)
++|+.++|+. +++||+|++.. .+++.++..+|+++.++|||||++++.+..
T Consensus 270 ~GDa~dlpf~~~l~~~d~sFDlVisdg-sH~~~d~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 270 QGDQNDAEFLDRIARRYGPFDIVIDDG-SHINAHVRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp ECCTTCHHHHHHHHHHHCCEEEEEECS-CCCHHHHHHHHHHHGGGEEEEEEEEEECGG
T ss_pred EecccccchhhhhhcccCCccEEEECC-cccchhHHHHHHHHHHhcCCCeEEEEEecc
Confidence 9999998876 68999999875 467778889999999999999999998765
No 205
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.42 E-value=2.3e-13 Score=124.20 Aligned_cols=114 Identities=12% Similarity=0.108 Sum_probs=88.5
Q ss_pred HHHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCC
Q 018003 163 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL 242 (362)
Q Consensus 163 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~ 242 (362)
....+.+.+.+...++.+|||||||+|.++..+++.+. +|+|+|+++.+++.+++++... +...++.++++|+..+
T Consensus 14 ~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~~~--~v~~vD~~~~~~~~a~~~~~~~--~~~~~v~~~~~D~~~~ 89 (285)
T 1zq9_A 14 PLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAK--KVVACELDPRLVAELHKRVQGT--PVASKLQVLVGDVLKT 89 (285)
T ss_dssp HHHHHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHHSS--EEEEEESCHHHHHHHHHHHTTS--TTGGGEEEEESCTTTS
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhhCC--EEEEEECCHHHHHHHHHHHHhc--CCCCceEEEEcceecc
Confidence 44567778888777889999999999999999999876 9999999999999999987643 1125799999999887
Q ss_pred CCCCCcceEEEec-----------ccccCCCCHHHHH----HHH--HhhccCCcEEE
Q 018003 243 PFASSSIDAVHAG-----------AAIHCWSSPSTGV----AEI--SRVLRPGGVFV 282 (362)
Q Consensus 243 p~~~~~fD~V~~~-----------~vl~h~~d~~~~l----~~i--~r~LkpgG~li 282 (362)
+++ +||+|+++ .+++|.+++..++ +|+ +++|+|||.++
T Consensus 90 ~~~--~fD~vv~nlpy~~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 90 DLP--FFDTCVANLPYQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLY 144 (285)
T ss_dssp CCC--CCSEEEEECCGGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTC
T ss_pred cch--hhcEEEEecCcccchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCccc
Confidence 765 79999996 4455555443221 333 46999999664
No 206
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.41 E-value=9.1e-12 Score=117.94 Aligned_cols=105 Identities=17% Similarity=0.072 Sum_probs=86.7
Q ss_pred CCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCC-CCC-CCCcceEEE
Q 018003 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR-LPF-ASSSIDAVH 253 (362)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~-~p~-~~~~fD~V~ 253 (362)
.++.+|||+| |+|.++..++..++..+|+|+|+++.+++.|+++++.. + ..++.++++|+.. +|. .+++||+|+
T Consensus 171 ~~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~-g--~~~v~~~~~D~~~~l~~~~~~~fD~Vi 246 (373)
T 2qm3_A 171 LENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEI-G--YEDIEIFTFDLRKPLPDYALHKFDTFI 246 (373)
T ss_dssp STTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHH-T--CCCEEEECCCTTSCCCTTTSSCBSEEE
T ss_pred CCCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc-C--CCCEEEEEChhhhhchhhccCCccEEE
Confidence 3578999999 99999999998877679999999999999999998876 1 2389999999988 663 356899999
Q ss_pred ecccccCCCCHHHHHHHHHhhccCCcEE-EEEE
Q 018003 254 AGAAIHCWSSPSTGVAEISRVLRPGGVF-VGTT 285 (362)
Q Consensus 254 ~~~vl~h~~d~~~~l~~i~r~LkpgG~l-i~~~ 285 (362)
++..+++. ....+++++.++|||||++ +++.
T Consensus 247 ~~~p~~~~-~~~~~l~~~~~~LkpgG~~~~~~~ 278 (373)
T 2qm3_A 247 TDPPETLE-AIRAFVGRGIATLKGPRCAGYFGI 278 (373)
T ss_dssp ECCCSSHH-HHHHHHHHHHHTBCSTTCEEEEEE
T ss_pred ECCCCchH-HHHHHHHHHHHHcccCCeEEEEEE
Confidence 98765433 2478899999999999954 5544
No 207
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.41 E-value=5.9e-13 Score=118.91 Aligned_cols=107 Identities=10% Similarity=0.040 Sum_probs=87.3
Q ss_pred CCCCeEEEEcCccchHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCC-C-C-----CCC
Q 018003 176 VLGGNIIDASCGSGLFSRIFAKSGL-FSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-P-F-----ASS 247 (362)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~-p-~-----~~~ 247 (362)
.++.+|||||||+|..+..+++..+ +.+++++|+++.+++.|+++++.. +...++.++.+|+... + + .++
T Consensus 78 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~--g~~~~i~~~~gda~~~l~~l~~~~~~~~ 155 (247)
T 1sui_A 78 INAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKA--GVDHKIDFREGPALPVLDEMIKDEKNHG 155 (247)
T ss_dssp TTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHT--TCGGGEEEEESCHHHHHHHHHHSGGGTT
T ss_pred hCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc--CCCCCeEEEECCHHHHHHHHHhccCCCC
Confidence 3467999999999999999998754 579999999999999999998775 2235799999998653 3 1 157
Q ss_pred cceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEc
Q 018003 248 SIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 287 (362)
Q Consensus 248 ~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~ 287 (362)
+||+|++... ..+...+++++.++|||||++++....
T Consensus 156 ~fD~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~d~~~ 192 (247)
T 1sui_A 156 SYDFIFVDAD---KDNYLNYHKRLIDLVKVGGVIGYDNTL 192 (247)
T ss_dssp CBSEEEECSC---STTHHHHHHHHHHHBCTTCCEEEECTT
T ss_pred CEEEEEEcCc---hHHHHHHHHHHHHhCCCCeEEEEecCC
Confidence 8999998754 346788999999999999999886543
No 208
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.40 E-value=3.3e-12 Score=116.83 Aligned_cols=111 Identities=16% Similarity=0.277 Sum_probs=84.2
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCC--CCCCCEEEEEecCCCC-CCCCCcceEEE
Q 018003 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESN--FPKENFLLVRADISRL-PFASSSIDAVH 253 (362)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~--~~~~~~~~~~~d~~~~-p~~~~~fD~V~ 253 (362)
++.+|||||||+|..+..+++..+..+|+++|+++.+++.|++++..... ...+++.++.+|+... +..+++||+|+
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvIi 162 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVII 162 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEEE
T ss_pred CCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEEE
Confidence 46799999999999999999876567999999999999999998764300 1246899999998764 34467899999
Q ss_pred ecccccCCCCH----HHHHHHHHhhccCCcEEEEEEEc
Q 018003 254 AGAAIHCWSSP----STGVAEISRVLRPGGVFVGTTYI 287 (362)
Q Consensus 254 ~~~vl~h~~d~----~~~l~~i~r~LkpgG~li~~~~~ 287 (362)
+...-...+.. ..+++++.++|||||++++....
T Consensus 163 ~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~s 200 (294)
T 3adn_A 163 SDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGV 200 (294)
T ss_dssp ECC----------CCHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred ECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEecCC
Confidence 96543222221 57899999999999999987643
No 209
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.40 E-value=1.2e-11 Score=107.02 Aligned_cols=114 Identities=15% Similarity=0.163 Sum_probs=87.2
Q ss_pred CCCcHHHHHHHHhhc---CCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEE
Q 018003 159 FPGPEKEFELMKGYL---KPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLV 235 (362)
Q Consensus 159 ~~~~~~~~~~l~~~l---~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~ 235 (362)
+..+......+...+ ...++.+|||+|||+|.++..+++.+. .+++|+|+++.+++.+++++... ..++.++
T Consensus 28 ~~~~~~~~~~l~~~~~~~~~~~~~~vlD~g~G~G~~~~~l~~~~~-~~v~~vD~~~~~~~~a~~~~~~~----~~~~~~~ 102 (207)
T 1wy7_A 28 YRTPGNAASELLWLAYSLGDIEGKVVADLGAGTGVLSYGALLLGA-KEVICVEVDKEAVDVLIENLGEF----KGKFKVF 102 (207)
T ss_dssp CCCCHHHHHHHHHHHHHTTSSTTCEEEEETCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHHTGGG----TTSEEEE
T ss_pred ecCchHHHHHHHHHHHHcCCCCcCEEEEeeCCCCHHHHHHHHcCC-CEEEEEECCHHHHHHHHHHHHHc----CCCEEEE
Confidence 344444444444332 345678999999999999999998853 47999999999999999998766 2289999
Q ss_pred EecCCCCCCCCCcceEEEecccccCCC--CHHHHHHHHHhhccCCcEEE
Q 018003 236 RADISRLPFASSSIDAVHAGAAIHCWS--SPSTGVAEISRVLRPGGVFV 282 (362)
Q Consensus 236 ~~d~~~~p~~~~~fD~V~~~~vl~h~~--d~~~~l~~i~r~LkpgG~li 282 (362)
++|+..++ ++||+|+++..+++.. ....+++++.++| ||.++
T Consensus 103 ~~d~~~~~---~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~l--~~~~~ 146 (207)
T 1wy7_A 103 IGDVSEFN---SRVDIVIMNPPFGSQRKHADRPFLLKAFEIS--DVVYS 146 (207)
T ss_dssp ESCGGGCC---CCCSEEEECCCCSSSSTTTTHHHHHHHHHHC--SEEEE
T ss_pred ECchHHcC---CCCCEEEEcCCCccccCCchHHHHHHHHHhc--CcEEE
Confidence 99998875 4899999998877764 3357889999988 55443
No 210
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.39 E-value=2.7e-12 Score=113.88 Aligned_cols=117 Identities=20% Similarity=0.182 Sum_probs=90.5
Q ss_pred HHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCC-C
Q 018003 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGL-FSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-P 243 (362)
Q Consensus 166 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~-p 243 (362)
...+...+...++.+|||+|||+|..+..+++..+ ..+++++|+++.+++.|+++++.. +...++.++.+|+... +
T Consensus 49 ~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--g~~~~v~~~~~d~~~~~~ 126 (239)
T 2hnk_A 49 GQFLNILTKISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKEN--GLENKIFLKLGSALETLQ 126 (239)
T ss_dssp HHHHHHHHHHHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHT--TCGGGEEEEESCHHHHHH
T ss_pred HHHHHHHHHhhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc--CCCCCEEEEECCHHHHHH
Confidence 34444444444578999999999999999998854 569999999999999999998765 1124599999997542 2
Q ss_pred --------------CCC--CcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEc
Q 018003 244 --------------FAS--SSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 287 (362)
Q Consensus 244 --------------~~~--~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~ 287 (362)
|++ ++||+|++....+ +...+++++.++|||||++++.+..
T Consensus 127 ~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~~~---~~~~~l~~~~~~L~pgG~lv~~~~~ 183 (239)
T 2hnk_A 127 VLIDSKSAPSWASDFAFGPSSIDLFFLDADKE---NYPNYYPLILKLLKPGGLLIADNVL 183 (239)
T ss_dssp HHHHCSSCCGGGTTTCCSTTCEEEEEECSCGG---GHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred HHHhhcccccccccccCCCCCcCEEEEeCCHH---HHHHHHHHHHHHcCCCeEEEEEccc
Confidence 222 7899999886543 4568899999999999999987544
No 211
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.38 E-value=3e-12 Score=112.77 Aligned_cols=157 Identities=11% Similarity=0.047 Sum_probs=113.3
Q ss_pred HHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCC
Q 018003 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 245 (362)
Q Consensus 166 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~ 245 (362)
+..+...+.. ..+|||+|||+|.++..+....+..+|+++|+++.+++.+++++... ..+..+.+.|...-+ +
T Consensus 123 Y~~i~~~i~~--p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~----g~~~~~~v~D~~~~~-p 195 (281)
T 3lcv_B 123 YRELFRHLPR--PNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRL----NVPHRTNVADLLEDR-L 195 (281)
T ss_dssp HHHHGGGSCC--CSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHT----TCCEEEEECCTTTSC-C
T ss_pred HHHHHhccCC--CceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhc----CCCceEEEeeecccC-C
Confidence 4445555533 67999999999999999988878889999999999999999999886 456888999987655 4
Q ss_pred CCcceEEEecccccCCCCHH--HHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhcccccccccccCCHHH
Q 018003 246 SSSIDAVHAGAAIHCWSSPS--TGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVGFSIPVLGFDD 323 (362)
Q Consensus 246 ~~~fD~V~~~~vl~h~~d~~--~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 323 (362)
.+.||+|+++-+++|+.+-. ..+ ++...|+|+|+++- .|...-. ...+.+ .-.-...
T Consensus 196 ~~~~DvaL~lkti~~Le~q~kg~g~-~ll~aL~~~~vvVS-fp~ksl~-Grs~gm------------------~~~Y~~~ 254 (281)
T 3lcv_B 196 DEPADVTLLLKTLPCLETQQRGSGW-EVIDIVNSPNIVVT-FPTKSLG-QRSKGM------------------FQNYSQS 254 (281)
T ss_dssp CSCCSEEEETTCHHHHHHHSTTHHH-HHHHHSSCSEEEEE-EECC--------CH------------------HHHHHHH
T ss_pred CCCcchHHHHHHHHHhhhhhhHHHH-HHHHHhCCCCEEEe-ccchhhc-CCCcch------------------hhHHHHH
Confidence 67899999999999996543 444 89999999997763 3331100 000111 1112356
Q ss_pred HHHHHHHCCCEEEEEEEeceeEEEEeeC
Q 018003 324 LKRIFRQFQLVVNLKLFYGHIQHYIVKI 351 (362)
Q Consensus 324 l~~ll~~~Gf~~v~~~~~g~~~~~~~~k 351 (362)
|+..+.+.|. .++...++.--.|+.+|
T Consensus 255 ~e~~~~~~g~-~~~~~~~~nEl~y~i~k 281 (281)
T 3lcv_B 255 FESQARERSC-RIQRLEIGNELIYVIQK 281 (281)
T ss_dssp HHHHHHHHTC-CEEEEEETTEEEEEEC-
T ss_pred HHHHHHhcCC-ceeeeeecCeeEEEecC
Confidence 8888999999 45566666666665543
No 212
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.38 E-value=4.3e-12 Score=118.86 Aligned_cols=127 Identities=11% Similarity=0.100 Sum_probs=97.4
Q ss_pred CCCCCcHHHHHHHHhh---c-CCCCCCeEEEEcCccchHHHHHHHhCCC-----CEEEEEeCCHHHHHHHHHHHhhcCCC
Q 018003 157 GGFPGPEKEFELMKGY---L-KPVLGGNIIDASCGSGLFSRIFAKSGLF-----SLVVALDYSENMLKQCYEFVQQESNF 227 (362)
Q Consensus 157 ~~~~~~~~~~~~l~~~---l-~~~~~~~vLDiGcG~G~~~~~l~~~~~~-----~~v~gvD~s~~~~~~a~~~~~~~~~~ 227 (362)
+.+++|......+... + .+.++.+|||+|||+|.++..+++..+. .+++|+|+++.+++.|+.++...
T Consensus 106 g~~~TP~~i~~~~~~ll~~l~~~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~--- 182 (344)
T 2f8l_A 106 NHQMTPDSIGFIVAYLLEKVIQKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQ--- 182 (344)
T ss_dssp GGCCCCHHHHHHHHHHHHHHHTTCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHH---
T ss_pred CcCCChHHHHHHHHHHHHHhcCCCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhC---
Confidence 4456676654443333 2 4446789999999999999988876432 58999999999999999988766
Q ss_pred CCCCEEEEEecCCCCCCCCCcceEEEecccccCCCCHH------------------HHHHHHHhhccCCcEEEEEEEcc
Q 018003 228 PKENFLLVRADISRLPFASSSIDAVHAGAAIHCWSSPS------------------TGVAEISRVLRPGGVFVGTTYIV 288 (362)
Q Consensus 228 ~~~~~~~~~~d~~~~p~~~~~fD~V~~~~vl~h~~d~~------------------~~l~~i~r~LkpgG~li~~~~~~ 288 (362)
..++.++++|..... ..+.||+|+++-.+.++++.. .+++++.+.|||||++++.+|+.
T Consensus 183 -g~~~~i~~~D~l~~~-~~~~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~ 259 (344)
T 2f8l_A 183 -RQKMTLLHQDGLANL-LVDPVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDA 259 (344)
T ss_dssp -TCCCEEEESCTTSCC-CCCCEEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGG
T ss_pred -CCCceEEECCCCCcc-ccCCccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECch
Confidence 236889999986633 457899999998776654332 57999999999999999998763
No 213
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.38 E-value=2.2e-12 Score=118.40 Aligned_cols=106 Identities=16% Similarity=0.162 Sum_probs=85.4
Q ss_pred CeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCC--CCCCCcceEEEecc
Q 018003 179 GNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL--PFASSSIDAVHAGA 256 (362)
Q Consensus 179 ~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~--p~~~~~fD~V~~~~ 256 (362)
.+|||||||+|.++..+++..+..+++++|+++.+++.|++++... ...+++++++|+..+ .+++++||+|++..
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~---~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~ 167 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIP---RAPRVKIRVDDARMVAESFTPASRDVIIRDV 167 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCC---CTTTEEEEESCHHHHHHTCCTTCEEEEEECC
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhcccc---CCCceEEEECcHHHHHhhccCCCCCEEEECC
Confidence 4999999999999999999767779999999999999999987542 246899999998654 23467899999864
Q ss_pred cccCCC----CHHHHHHHHHhhccCCcEEEEEEEc
Q 018003 257 AIHCWS----SPSTGVAEISRVLRPGGVFVGTTYI 287 (362)
Q Consensus 257 vl~h~~----d~~~~l~~i~r~LkpgG~li~~~~~ 287 (362)
..+... ....++++++++|||||++++....
T Consensus 168 ~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~~ 202 (317)
T 3gjy_A 168 FAGAITPQNFTTVEFFEHCHRGLAPGGLYVANCGD 202 (317)
T ss_dssp STTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred CCccccchhhhHHHHHHHHHHhcCCCcEEEEEecC
Confidence 322211 1257899999999999999988754
No 214
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.37 E-value=3.4e-12 Score=115.74 Aligned_cols=109 Identities=14% Similarity=0.146 Sum_probs=84.8
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcC-CCCCCCEEEEEecCCC-CCCCCCcceEEEe
Q 018003 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-NFPKENFLLVRADISR-LPFASSSIDAVHA 254 (362)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~~~~~~~~~d~~~-~p~~~~~fD~V~~ 254 (362)
.+.+|||+|||+|.++..+++..+..+++++|+++.+++.|++++.... +...+++.++.+|+.. ++...++||+|++
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii~ 154 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIMV 154 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEEE
Confidence 4679999999999999999887445699999999999999999875310 1124689999999865 3334578999999
Q ss_pred cccccCCCC----HHHHHHHHHhhccCCcEEEEEE
Q 018003 255 GAAIHCWSS----PSTGVAEISRVLRPGGVFVGTT 285 (362)
Q Consensus 255 ~~vl~h~~d----~~~~l~~i~r~LkpgG~li~~~ 285 (362)
....+..+. ...+++++.++|||||++++..
T Consensus 155 d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~ 189 (275)
T 1iy9_A 155 DSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQT 189 (275)
T ss_dssp SCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred CCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 654322211 2578999999999999999874
No 215
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.37 E-value=2.9e-12 Score=117.50 Aligned_cols=109 Identities=13% Similarity=0.097 Sum_probs=82.7
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhc-CCCCCCCEEEEEecCCC-CCCCCCcceEEEe
Q 018003 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE-SNFPKENFLLVRADISR-LPFASSSIDAVHA 254 (362)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~-~~~~~~~~~~~~~d~~~-~p~~~~~fD~V~~ 254 (362)
.+.+|||+|||+|.++..+++..+..+++++|+++.+++.|++++... .+...+++.++.+|+.. ++...++||+|++
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 169 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIII 169 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEEE
Confidence 357999999999999999998755579999999999999999987531 00114689999999765 3444678999998
Q ss_pred cccccCCC-----CHHHHHHHHHhhccCCcEEEEEE
Q 018003 255 GAAIHCWS-----SPSTGVAEISRVLRPGGVFVGTT 285 (362)
Q Consensus 255 ~~vl~h~~-----d~~~~l~~i~r~LkpgG~li~~~ 285 (362)
...-.++. ....+++++.++|||||++++..
T Consensus 170 d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 205 (296)
T 1inl_A 170 DSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAET 205 (296)
T ss_dssp EC----------CCSHHHHHHHHHHEEEEEEEEEEC
T ss_pred cCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 53311021 12688999999999999999874
No 216
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.36 E-value=1.3e-12 Score=115.62 Aligned_cols=108 Identities=15% Similarity=0.051 Sum_probs=86.5
Q ss_pred CCCCeEEEEcCccchHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCC----CCCCC--Cc
Q 018003 176 VLGGNIIDASCGSGLFSRIFAKSGL-FSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR----LPFAS--SS 248 (362)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~----~p~~~--~~ 248 (362)
.++.+|||+|||+|..+..+++..+ +.+++++|+++.+++.|+++++.. +...++.++.+|+.+ ++..+ ++
T Consensus 71 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~--g~~~~i~~~~~d~~~~l~~l~~~~~~~~ 148 (232)
T 3cbg_A 71 TGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKA--GVAEKISLRLGPALATLEQLTQGKPLPE 148 (232)
T ss_dssp HTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHH--TCGGGEEEEESCHHHHHHHHHTSSSCCC
T ss_pred cCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc--CCCCcEEEEEcCHHHHHHHHHhcCCCCC
Confidence 3467999999999999999998754 569999999999999999988765 123479999999743 23333 78
Q ss_pred ceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEcc
Q 018003 249 IDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIV 288 (362)
Q Consensus 249 fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~~ 288 (362)
||+|++.... .+...+++++.++|||||++++.....
T Consensus 149 fD~V~~d~~~---~~~~~~l~~~~~~LkpgG~lv~~~~~~ 185 (232)
T 3cbg_A 149 FDLIFIDADK---RNYPRYYEIGLNLLRRGGLMVIDNVLW 185 (232)
T ss_dssp EEEEEECSCG---GGHHHHHHHHHHTEEEEEEEEEECTTG
T ss_pred cCEEEECCCH---HHHHHHHHHHHHHcCCCeEEEEeCCCc
Confidence 9999987652 356789999999999999999875543
No 217
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.36 E-value=1.3e-12 Score=114.90 Aligned_cols=109 Identities=14% Similarity=0.074 Sum_probs=87.2
Q ss_pred CCCCCCeEEEEcCccchHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCC-C-CCC----
Q 018003 174 KPVLGGNIIDASCGSGLFSRIFAKSGL-FSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-P-FAS---- 246 (362)
Q Consensus 174 ~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~-p-~~~---- 246 (362)
...++.+|||+|||+|..+..+++..+ ..+++++|+++.+++.|+++++.. +...++.++.+|+... + +..
T Consensus 66 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--g~~~~i~~~~~d~~~~~~~~~~~~~~ 143 (229)
T 2avd_A 66 RLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQA--EAEHKIDLRLKPALETLDELLAAGEA 143 (229)
T ss_dssp HHTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHT--TCTTTEEEEESCHHHHHHHHHHTTCT
T ss_pred HhcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHC--CCCCeEEEEEcCHHHHHHHHHhcCCC
Confidence 334578999999999999999998744 579999999999999999998765 2236899999998543 1 211
Q ss_pred CcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEc
Q 018003 247 SSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 287 (362)
Q Consensus 247 ~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~ 287 (362)
++||+|++... ..+...+++++.++|+|||++++....
T Consensus 144 ~~~D~v~~d~~---~~~~~~~l~~~~~~L~pgG~lv~~~~~ 181 (229)
T 2avd_A 144 GTFDVAVVDAD---KENCSAYYERCLQLLRPGGILAVLRVL 181 (229)
T ss_dssp TCEEEEEECSC---STTHHHHHHHHHHHEEEEEEEEEECCS
T ss_pred CCccEEEECCC---HHHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 68999998654 345678999999999999999986544
No 218
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.36 E-value=1.6e-11 Score=110.88 Aligned_cols=135 Identities=18% Similarity=0.224 Sum_probs=104.6
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCCC
Q 018003 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 246 (362)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~~ 246 (362)
.++.+.+.+ |.+|||+|||+|.++..++..+. .+|+++|+++.+++.++++++.+ +...++.++++|...++ ..
T Consensus 117 ~ri~~~~~~--g~~VlD~~aG~G~~~i~~a~~g~-~~V~avD~np~a~~~~~~N~~~N--~v~~~v~~~~~D~~~~~-~~ 190 (278)
T 3k6r_A 117 VRMAKVAKP--DELVVDMFAGIGHLSLPIAVYGK-AKVIAIEKDPYTFKFLVENIHLN--KVEDRMSAYNMDNRDFP-GE 190 (278)
T ss_dssp HHHHHHCCT--TCEEEETTCTTTTTTHHHHHHTC-CEEEEECCCHHHHHHHHHHHHHT--TCTTTEEEECSCTTTCC-CC
T ss_pred HHHHHhcCC--CCEEEEecCcCcHHHHHHHHhcC-CeEEEEECCHHHHHHHHHHHHHc--CCCCcEEEEeCcHHHhc-cc
Confidence 455555554 88999999999999999998863 58999999999999999998876 34567999999998876 35
Q ss_pred CcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhcccccccccccCCHHHHHH
Q 018003 247 SSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVGFSIPVLGFDDLKR 326 (362)
Q Consensus 247 ~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ 326 (362)
+.||.|+++.- +....+|..+.++|||||++.+....... ...-...+.+++
T Consensus 191 ~~~D~Vi~~~p----~~~~~~l~~a~~~lk~gG~ih~~~~~~e~------------------------~~~~~~~e~i~~ 242 (278)
T 3k6r_A 191 NIADRILMGYV----VRTHEFIPKALSIAKDGAIIHYHNTVPEK------------------------LMPREPFETFKR 242 (278)
T ss_dssp SCEEEEEECCC----SSGGGGHHHHHHHEEEEEEEEEEEEEEGG------------------------GTTTTTHHHHHH
T ss_pred cCCCEEEECCC----CcHHHHHHHHHHHcCCCCEEEEEeeeccc------------------------ccchhHHHHHHH
Confidence 78999997642 34557889999999999998776544221 111233467888
Q ss_pred HHHHCCCEE
Q 018003 327 IFRQFQLVV 335 (362)
Q Consensus 327 ll~~~Gf~~ 335 (362)
+++..|+..
T Consensus 243 ~~~~~g~~v 251 (278)
T 3k6r_A 243 ITKEYGYDV 251 (278)
T ss_dssp HHHHTTCEE
T ss_pred HHHHcCCcE
Confidence 899999964
No 219
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.35 E-value=6.1e-12 Score=107.74 Aligned_cols=100 Identities=19% Similarity=0.277 Sum_probs=77.1
Q ss_pred CCCCCeEEEEcCccchHHHHHHHhCCC---------CEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEE-EecCCCCC-
Q 018003 175 PVLGGNIIDASCGSGLFSRIFAKSGLF---------SLVVALDYSENMLKQCYEFVQQESNFPKENFLLV-RADISRLP- 243 (362)
Q Consensus 175 ~~~~~~vLDiGcG~G~~~~~l~~~~~~---------~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~-~~d~~~~p- 243 (362)
..++.+|||+|||+|.++..+++..+. .+|+|+|+++.+ ...++.++ .+|+...+
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~--------------~~~~~~~~~~~d~~~~~~ 85 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF--------------PLEGATFLCPADVTDPRT 85 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC--------------CCTTCEEECSCCTTSHHH
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc--------------cCCCCeEEEeccCCCHHH
Confidence 456889999999999999999988432 699999999831 02467888 88987653
Q ss_pred -------CCCCcceEEEecccccCC----CCH-------HHHHHHHHhhccCCcEEEEEEEcc
Q 018003 244 -------FASSSIDAVHAGAAIHCW----SSP-------STGVAEISRVLRPGGVFVGTTYIV 288 (362)
Q Consensus 244 -------~~~~~fD~V~~~~vl~h~----~d~-------~~~l~~i~r~LkpgG~li~~~~~~ 288 (362)
+++++||+|++...++.. .|+ ..+++++.++|||||.+++.++..
T Consensus 86 ~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 148 (196)
T 2nyu_A 86 SQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAG 148 (196)
T ss_dssp HHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCS
T ss_pred HHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 335689999997654432 333 478999999999999999987643
No 220
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.35 E-value=6.8e-12 Score=108.04 Aligned_cols=90 Identities=16% Similarity=0.154 Sum_probs=72.8
Q ss_pred CCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCCCCcceEEE
Q 018003 174 KPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVH 253 (362)
Q Consensus 174 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~~~~fD~V~ 253 (362)
...++.+|||+|||+|.++..+++.+ ..+++|+|+++.+++.|++++ .++.++++|+..++ ++||+|+
T Consensus 48 ~~~~~~~vlD~gcG~G~~~~~l~~~~-~~~v~~vD~~~~~~~~a~~~~--------~~~~~~~~d~~~~~---~~~D~v~ 115 (200)
T 1ne2_A 48 GNIGGRSVIDAGTGNGILACGSYLLG-AESVTAFDIDPDAIETAKRNC--------GGVNFMVADVSEIS---GKYDTWI 115 (200)
T ss_dssp TSSBTSEEEEETCTTCHHHHHHHHTT-BSEEEEEESCHHHHHHHHHHC--------TTSEEEECCGGGCC---CCEEEEE
T ss_pred CCCCCCEEEEEeCCccHHHHHHHHcC-CCEEEEEECCHHHHHHHHHhc--------CCCEEEECcHHHCC---CCeeEEE
Confidence 34467899999999999999998874 347999999999999999873 27899999998875 6899999
Q ss_pred ecccccCCCC--HHHHHHHHHhhc
Q 018003 254 AGAAIHCWSS--PSTGVAEISRVL 275 (362)
Q Consensus 254 ~~~vl~h~~d--~~~~l~~i~r~L 275 (362)
++..++|+.+ ...+++++.+++
T Consensus 116 ~~~p~~~~~~~~~~~~l~~~~~~~ 139 (200)
T 1ne2_A 116 MNPPFGSVVKHSDRAFIDKAFETS 139 (200)
T ss_dssp ECCCC-------CHHHHHHHHHHE
T ss_pred ECCCchhccCchhHHHHHHHHHhc
Confidence 9999999865 347899999998
No 221
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.34 E-value=3e-12 Score=119.14 Aligned_cols=110 Identities=18% Similarity=0.175 Sum_probs=84.9
Q ss_pred CCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhc-CCCCCCCEEEEEecCCCC-C-CCCCcceEE
Q 018003 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE-SNFPKENFLLVRADISRL-P-FASSSIDAV 252 (362)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~-~~~~~~~~~~~~~d~~~~-p-~~~~~fD~V 252 (362)
.++.+|||||||+|.++..+++..+..+|+++|+|+.+++.|++++... .+....++.++++|+... + .++++||+|
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlI 198 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAV 198 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEE
T ss_pred CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEE
Confidence 3467999999999999999998766679999999999999999987541 001136899999998653 2 345789999
Q ss_pred Eecccc--cCCCC--HHHHHHHHHhhccCCcEEEEEE
Q 018003 253 HAGAAI--HCWSS--PSTGVAEISRVLRPGGVFVGTT 285 (362)
Q Consensus 253 ~~~~vl--~h~~d--~~~~l~~i~r~LkpgG~li~~~ 285 (362)
++.... ++..+ ...+++++.++|||||++++..
T Consensus 199 i~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 235 (334)
T 1xj5_A 199 IVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQA 235 (334)
T ss_dssp EECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 986542 11111 3689999999999999999864
No 222
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.34 E-value=2.2e-12 Score=119.27 Aligned_cols=110 Identities=17% Similarity=0.114 Sum_probs=86.8
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhc-CC-CCCCCEEEEEecCCC-CCCCCCcceEEE
Q 018003 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE-SN-FPKENFLLVRADISR-LPFASSSIDAVH 253 (362)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~-~~-~~~~~~~~~~~d~~~-~p~~~~~fD~V~ 253 (362)
++.+|||||||+|.++..+++..+..+++++|+++.+++.|++++... .+ ...+++.++.+|+.. ++..+++||+|+
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVVI 156 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEEE
T ss_pred CCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEEE
Confidence 457999999999999999998755679999999999999999987541 00 014689999999866 344467899999
Q ss_pred ecccccC-CCC------HHHHHHHHHhhccCCcEEEEEEE
Q 018003 254 AGAAIHC-WSS------PSTGVAEISRVLRPGGVFVGTTY 286 (362)
Q Consensus 254 ~~~vl~h-~~d------~~~~l~~i~r~LkpgG~li~~~~ 286 (362)
+....++ ... ...+++++.++|||||++++...
T Consensus 157 ~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 196 (314)
T 1uir_A 157 IDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTG 196 (314)
T ss_dssp EECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEE
T ss_pred ECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEcc
Confidence 9765543 112 26889999999999999998754
No 223
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.34 E-value=5.6e-13 Score=120.77 Aligned_cols=112 Identities=18% Similarity=0.146 Sum_probs=80.8
Q ss_pred HHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEE--EecCCCCCCC
Q 018003 168 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLV--RADISRLPFA 245 (362)
Q Consensus 168 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~--~~d~~~~p~~ 245 (362)
.+.+.....++.+|||+|||+|.++..+++. .+|+|+|+++ |+..++++.... .....++.++ ++|+..+|
T Consensus 73 ~i~~~~~~~~g~~VLDlGcGtG~~s~~la~~---~~V~gVD~s~-m~~~a~~~~~~~-~~~~~~v~~~~~~~D~~~l~-- 145 (276)
T 2wa2_A 73 WIDERGGVELKGTVVDLGCGRGSWSYYAASQ---PNVREVKAYT-LGTSGHEKPRLV-ETFGWNLITFKSKVDVTKME-- 145 (276)
T ss_dssp HHHHTTSCCCCEEEEEESCTTCHHHHHHHTS---TTEEEEEEEC-CCCTTSCCCCCC-CCTTGGGEEEECSCCGGGCC--
T ss_pred HHHHcCCCCCCCEEEEeccCCCHHHHHHHHc---CCEEEEECch-hhhhhhhchhhh-hhcCCCeEEEeccCcHhhCC--
Confidence 3334333456889999999999999999987 3899999998 543332210000 0001268888 89998876
Q ss_pred CCcceEEEecccccCCCCHH-------HHHHHHHhhccCCc--EEEEEEEc
Q 018003 246 SSSIDAVHAGAAIHCWSSPS-------TGVAEISRVLRPGG--VFVGTTYI 287 (362)
Q Consensus 246 ~~~fD~V~~~~vl~h~~d~~-------~~l~~i~r~LkpgG--~li~~~~~ 287 (362)
+++||+|++..+ ++..++. .+|+++.++||||| .|++.++.
T Consensus 146 ~~~fD~Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 146 PFQADTVLCDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred CCCcCEEEECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 678999999887 5554432 37899999999999 99987765
No 224
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.34 E-value=1e-11 Score=120.86 Aligned_cols=117 Identities=15% Similarity=0.110 Sum_probs=93.1
Q ss_pred HHhhcCCC--CCCeEEEEcCccchHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCC-
Q 018003 169 MKGYLKPV--LGGNIIDASCGSGLFSRIFAKSG-LFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF- 244 (362)
Q Consensus 169 l~~~l~~~--~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~- 244 (362)
+...+.+. ++.+|||+|||+|..+..+++.. ..+.|+++|+++.+++.+++++++. +..++.++++|+..++.
T Consensus 107 ~~~~L~~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~---g~~nv~~~~~D~~~~~~~ 183 (479)
T 2frx_A 107 PVAALFADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRC---GISNVALTHFDGRVFGAA 183 (479)
T ss_dssp HHHHHTTTTCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHH---TCCSEEEECCCSTTHHHH
T ss_pred HHHHhCcccCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc---CCCcEEEEeCCHHHhhhh
Confidence 34455666 78999999999999999999874 2469999999999999999998876 23579999999988764
Q ss_pred CCCcceEEEec------ccccCCCC----------------HHHHHHHHHhhccCCcEEEEEEEcc
Q 018003 245 ASSSIDAVHAG------AAIHCWSS----------------PSTGVAEISRVLRPGGVFVGTTYIV 288 (362)
Q Consensus 245 ~~~~fD~V~~~------~vl~h~~d----------------~~~~l~~i~r~LkpgG~li~~~~~~ 288 (362)
..++||+|++. .++.+.++ ...+|+++.++|||||+|+++|-..
T Consensus 184 ~~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~ 249 (479)
T 2frx_A 184 VPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTL 249 (479)
T ss_dssp STTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred ccccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccC
Confidence 45789999973 33443333 1367999999999999999988654
No 225
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.34 E-value=7.6e-13 Score=119.24 Aligned_cols=113 Identities=19% Similarity=0.131 Sum_probs=81.1
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEE--EecCCCCCC
Q 018003 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLV--RADISRLPF 244 (362)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~--~~d~~~~p~ 244 (362)
..+.+.....++.+|||+|||+|.++..+++. .+|+|+|+++ |+..+++..... .....++.++ ++|+..++
T Consensus 64 ~~i~~~~~~~~g~~VLDlGcGtG~~s~~la~~---~~V~gvD~s~-m~~~a~~~~~~~-~~~~~~v~~~~~~~D~~~l~- 137 (265)
T 2oxt_A 64 AWMEERGYVELTGRVVDLGCGRGGWSYYAASR---PHVMDVRAYT-LGVGGHEVPRIT-ESYGWNIVKFKSRVDIHTLP- 137 (265)
T ss_dssp HHHHHHTSCCCCEEEEEESCTTSHHHHHHHTS---TTEEEEEEEC-CCCSSCCCCCCC-CBTTGGGEEEECSCCTTTSC-
T ss_pred HHHHHcCCCCCCCEEEEeCcCCCHHHHHHHHc---CcEEEEECch-hhhhhhhhhhhh-hccCCCeEEEecccCHhHCC-
Confidence 33444333456889999999999999999887 3899999998 533322110000 0001268888 89998876
Q ss_pred CCCcceEEEecccccCCCCHH-------HHHHHHHhhccCCc--EEEEEEEc
Q 018003 245 ASSSIDAVHAGAAIHCWSSPS-------TGVAEISRVLRPGG--VFVGTTYI 287 (362)
Q Consensus 245 ~~~~fD~V~~~~vl~h~~d~~-------~~l~~i~r~LkpgG--~li~~~~~ 287 (362)
+++||+|++..+ ++..++. .+|+++.++||||| .|++.++.
T Consensus 138 -~~~fD~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 138 -VERTDVIMCDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp -CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred -CCCCcEEEEeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 678999999877 6555542 37899999999999 99987765
No 226
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.34 E-value=6.2e-12 Score=116.52 Aligned_cols=109 Identities=14% Similarity=0.173 Sum_probs=84.6
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcC-CCCCCCEEEEEecCCCC-CCCCCcceEEEe
Q 018003 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-NFPKENFLLVRADISRL-PFASSSIDAVHA 254 (362)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~~~~~~~~~d~~~~-p~~~~~fD~V~~ 254 (362)
++.+|||||||+|.++..+++..+..+++++|+|+.+++.|++++.... +...++++++++|+... +..+++||+|++
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi~ 195 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIV 195 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEEE
Confidence 4579999999999999999987556799999999999999999876410 01136899999998653 333578999998
Q ss_pred cccccCCC---C--HHHHHHHHHhhccCCcEEEEEEE
Q 018003 255 GAAIHCWS---S--PSTGVAEISRVLRPGGVFVGTTY 286 (362)
Q Consensus 255 ~~vl~h~~---d--~~~~l~~i~r~LkpgG~li~~~~ 286 (362)
... +++. . ...+++++.++|||||++++...
T Consensus 196 d~~-~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 231 (321)
T 2pt6_A 196 DSS-DPIGPAETLFNQNFYEKIYNALKPNGYCVAQCE 231 (321)
T ss_dssp ECC-CSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCc-CCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 653 2221 1 16889999999999999998754
No 227
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.33 E-value=2.2e-12 Score=118.69 Aligned_cols=112 Identities=13% Similarity=0.110 Sum_probs=85.1
Q ss_pred CCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhc-CCCCCCCEEEEEecCCC-CCCCCCcceEEE
Q 018003 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE-SNFPKENFLLVRADISR-LPFASSSIDAVH 253 (362)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~-~~~~~~~~~~~~~d~~~-~p~~~~~fD~V~ 253 (362)
.++.+|||||||+|.++..+++..+..+++++|+++.+++.|++++... .+...+++.++.+|+.. ++..+++||+|+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii 173 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVII 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEE
Confidence 3467999999999999999998866679999999999999999987641 00114689999999865 344467899999
Q ss_pred ecccccCCCC----HHHHHHHHHhhccCCcEEEEEEEc
Q 018003 254 AGAAIHCWSS----PSTGVAEISRVLRPGGVFVGTTYI 287 (362)
Q Consensus 254 ~~~vl~h~~d----~~~~l~~i~r~LkpgG~li~~~~~ 287 (362)
+....+..+. ...+++++.++|||||++++...+
T Consensus 174 ~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 211 (304)
T 2o07_A 174 TDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGEC 211 (304)
T ss_dssp EECC-----------CHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecCC
Confidence 8654322111 236899999999999999987644
No 228
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.33 E-value=2.6e-12 Score=124.10 Aligned_cols=117 Identities=20% Similarity=0.177 Sum_probs=92.4
Q ss_pred HHHhhcCCCCCCeEEEEcCccchHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC-CC
Q 018003 168 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGL-FSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-FA 245 (362)
Q Consensus 168 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p-~~ 245 (362)
.+...+...++.+|||+|||+|..+..+++... .+.|+++|+++.+++.+++++++. +.. +.++++|+..++ ..
T Consensus 92 l~a~~L~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~---G~~-v~~~~~Da~~l~~~~ 167 (464)
T 3m6w_A 92 AVGVLLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERW---GAP-LAVTQAPPRALAEAF 167 (464)
T ss_dssp HHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHH---CCC-CEEECSCHHHHHHHH
T ss_pred HHHHhcCcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc---CCe-EEEEECCHHHhhhhc
Confidence 445566777899999999999999999998743 368999999999999999999887 123 889999987765 34
Q ss_pred CCcceEEEec------ccccCCCCH----------------HHHHHHHHhhccCCcEEEEEEEcc
Q 018003 246 SSSIDAVHAG------AAIHCWSSP----------------STGVAEISRVLRPGGVFVGTTYIV 288 (362)
Q Consensus 246 ~~~fD~V~~~------~vl~h~~d~----------------~~~l~~i~r~LkpgG~li~~~~~~ 288 (362)
.++||+|++. .++.+-++. ..+|+++.++|||||+|+.+|-..
T Consensus 168 ~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~ 232 (464)
T 3m6w_A 168 GTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTF 232 (464)
T ss_dssp CSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred cccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccC
Confidence 6789999952 334333332 578999999999999999887543
No 229
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.32 E-value=1.5e-11 Score=107.37 Aligned_cols=148 Identities=11% Similarity=0.022 Sum_probs=106.3
Q ss_pred CCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCCCCcceEEEec
Q 018003 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAG 255 (362)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~~~~fD~V~~~ 255 (362)
.++.+|||+|||+|.++..+. +...|+|+|+++.+++.+++.+... ..+..+..+|....+.+ +++|+|+++
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~---~~~~y~a~DId~~~i~~ar~~~~~~----g~~~~~~v~D~~~~~~~-~~~DvvLll 175 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER---GIASVWGCDIHQGLGDVITPFAREK----DWDFTFALQDVLCAPPA-EAGDLALIF 175 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT---TCSEEEEEESBHHHHHHHHHHHHHT----TCEEEEEECCTTTSCCC-CBCSEEEEE
T ss_pred CCCCeEEEecCCccHHHHHhc---cCCeEEEEeCCHHHHHHHHHHHHhc----CCCceEEEeecccCCCC-CCcchHHHH
Confidence 457799999999999998877 4569999999999999999998776 57889999999887754 589999999
Q ss_pred ccccCCCCHH-HHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhcccccccccccCCHHHHHHHHHHCCCE
Q 018003 256 AAIHCWSSPS-TGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVGFSIPVLGFDDLKRIFRQFQLV 334 (362)
Q Consensus 256 ~vl~h~~d~~-~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~~Gf~ 334 (362)
-++||+.+.. ..+-++...|+++|+++ +.|...-. ...+ .+.-.-...|+..+ ...+.
T Consensus 176 k~lh~LE~q~~~~~~~ll~aL~~~~vvV-sfPtksl~-Gr~~------------------gm~~~Y~~~~e~~~-~~~~~ 234 (253)
T 3frh_A 176 KLLPLLEREQAGSAMALLQSLNTPRMAV-SFPTRSLG-GRGK------------------GMEANYAAWFEGGL-PAEFE 234 (253)
T ss_dssp SCHHHHHHHSTTHHHHHHHHCBCSEEEE-EEECC------------------------------CHHHHHHHHS-CTTEE
T ss_pred HHHHHhhhhchhhHHHHHHHhcCCCEEE-EcChHHhc-CCCc------------------chhhHHHHHHHHHh-hccch
Confidence 8888875332 23338888999987655 55532100 0000 11112234566666 56677
Q ss_pred EEEEEEeceeEEEEeeCc
Q 018003 335 VNLKLFYGHIQHYIVKIP 352 (362)
Q Consensus 335 ~v~~~~~g~~~~~~~~kp 352 (362)
+++...+|.--.|+.+|.
T Consensus 235 ~~~~~~~~nEl~~~i~~~ 252 (253)
T 3frh_A 235 IEDKKTIGTELIYLIKKN 252 (253)
T ss_dssp EEEEEEETTEEEEEEEEC
T ss_pred hhhheecCceEEEEEecC
Confidence 888888888888887763
No 230
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.32 E-value=3.6e-12 Score=113.06 Aligned_cols=106 Identities=13% Similarity=0.114 Sum_probs=85.7
Q ss_pred CCCCeEEEEcCccchHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCC-C-C-----CCC
Q 018003 176 VLGGNIIDASCGSGLFSRIFAKSGL-FSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-P-F-----ASS 247 (362)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~-p-~-----~~~ 247 (362)
.++.+|||||||+|..+..+++..+ +.+++++|+++.+++.|+++++.. +...++.++.+|+.+. + + ..+
T Consensus 69 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~--g~~~~i~~~~gda~~~l~~l~~~~~~~~ 146 (237)
T 3c3y_A 69 VNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKA--GVEHKINFIESDAMLALDNLLQGQESEG 146 (237)
T ss_dssp TTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHT--TCGGGEEEEESCHHHHHHHHHHSTTCTT
T ss_pred hCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc--CCCCcEEEEEcCHHHHHHHHHhccCCCC
Confidence 3467999999999999999998754 679999999999999999998775 2235799999998653 2 2 157
Q ss_pred cceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEE
Q 018003 248 SIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 286 (362)
Q Consensus 248 ~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~ 286 (362)
+||+|++...- .+...+++++.++|||||++++...
T Consensus 147 ~fD~I~~d~~~---~~~~~~l~~~~~~L~pGG~lv~d~~ 182 (237)
T 3c3y_A 147 SYDFGFVDADK---PNYIKYHERLMKLVKVGGIVAYDNT 182 (237)
T ss_dssp CEEEEEECSCG---GGHHHHHHHHHHHEEEEEEEEEECT
T ss_pred CcCEEEECCch---HHHHHHHHHHHHhcCCCeEEEEecC
Confidence 89999986432 3557889999999999999987653
No 231
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.31 E-value=1.4e-11 Score=105.61 Aligned_cols=98 Identities=16% Similarity=0.220 Sum_probs=75.5
Q ss_pred CCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCC-------C-
Q 018003 175 PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA-------S- 246 (362)
Q Consensus 175 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~-------~- 246 (362)
..++.+|||+|||+|.++..+++. ..+|+|+|+++.. ...++.++++|+...+.. .
T Consensus 23 ~~~g~~VLDlG~G~G~~s~~la~~--~~~V~gvD~~~~~--------------~~~~v~~~~~D~~~~~~~~~~~~~~~~ 86 (191)
T 3dou_A 23 VRKGDAVIEIGSSPGGWTQVLNSL--ARKIISIDLQEME--------------EIAGVRFIRCDIFKETIFDDIDRALRE 86 (191)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTT--CSEEEEEESSCCC--------------CCTTCEEEECCTTSSSHHHHHHHHHHH
T ss_pred CCCCCEEEEEeecCCHHHHHHHHc--CCcEEEEeccccc--------------cCCCeEEEEccccCHHHHHHHHHHhhc
Confidence 456889999999999999999988 4599999999741 136899999999876521 1
Q ss_pred ---CcceEEEecccccCCC----C-------HHHHHHHHHhhccCCcEEEEEEEcc
Q 018003 247 ---SSIDAVHAGAAIHCWS----S-------PSTGVAEISRVLRPGGVFVGTTYIV 288 (362)
Q Consensus 247 ---~~fD~V~~~~vl~h~~----d-------~~~~l~~i~r~LkpgG~li~~~~~~ 288 (362)
++||+|++........ | ...+++.+.++|||||.|++..+..
T Consensus 87 ~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~ 142 (191)
T 3dou_A 87 EGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQG 142 (191)
T ss_dssp HTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred ccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCC
Confidence 4899999975432211 1 2467889999999999999887643
No 232
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.30 E-value=5.2e-12 Score=113.59 Aligned_cols=100 Identities=12% Similarity=0.076 Sum_probs=82.5
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcC-CCCCCCEEEEEecCCCCCCCCCcceEEEec
Q 018003 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-NFPKENFLLVRADISRLPFASSSIDAVHAG 255 (362)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~~~~~~~~~d~~~~p~~~~~fD~V~~~ 255 (362)
.+.+|||||||+|.++..+++. + .+++++|+++.+++.|++++.... +...+++.++.+|..... ++||+|++.
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~-~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~---~~fD~Ii~d 146 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKY-D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI---KKYDLIFCL 146 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTS-S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC---CCEEEEEES
T ss_pred CCCEEEEEeCCcCHHHHHHHhC-C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH---hhCCEEEEC
Confidence 4579999999999999998887 5 799999999999999998653310 011468999999987764 789999986
Q ss_pred ccccCCCCHHHHHHHHHhhccCCcEEEEEEE
Q 018003 256 AAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 286 (362)
Q Consensus 256 ~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~ 286 (362)
..||..+++++.++|||||++++...
T Consensus 147 -----~~dp~~~~~~~~~~L~pgG~lv~~~~ 172 (262)
T 2cmg_A 147 -----QEPDIHRIDGLKRMLKEDGVFISVAK 172 (262)
T ss_dssp -----SCCCHHHHHHHHTTEEEEEEEEEEEE
T ss_pred -----CCChHHHHHHHHHhcCCCcEEEEEcC
Confidence 36788899999999999999998654
No 233
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.30 E-value=4.6e-12 Score=122.16 Aligned_cols=117 Identities=15% Similarity=0.078 Sum_probs=91.0
Q ss_pred HHHhhcCCCCCCeEEEEcCccchHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC-CC
Q 018003 168 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSG-LFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-FA 245 (362)
Q Consensus 168 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p-~~ 245 (362)
.+...+.+.++.+|||+|||+|..+..++... ..+.|+++|+++.+++.+++++++. +..++.++++|+..++ ..
T Consensus 96 l~~~~L~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~---g~~nv~v~~~Da~~l~~~~ 172 (456)
T 3m4x_A 96 IVGTAAAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERW---GVSNAIVTNHAPAELVPHF 172 (456)
T ss_dssp HHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHH---TCSSEEEECCCHHHHHHHH
T ss_pred HHHHHcCCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHc---CCCceEEEeCCHHHhhhhc
Confidence 44556677789999999999999999988763 2369999999999999999999887 2457999999987764 23
Q ss_pred CCcceEEEecc------cccCCCCH----------------HHHHHHHHhhccCCcEEEEEEEc
Q 018003 246 SSSIDAVHAGA------AIHCWSSP----------------STGVAEISRVLRPGGVFVGTTYI 287 (362)
Q Consensus 246 ~~~fD~V~~~~------vl~h~~d~----------------~~~l~~i~r~LkpgG~li~~~~~ 287 (362)
+++||+|++.. ++.+-++. ..+|+++.++|||||+|+.+|-.
T Consensus 173 ~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs 236 (456)
T 3m4x_A 173 SGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCT 236 (456)
T ss_dssp TTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESC
T ss_pred cccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEee
Confidence 57899999742 22221111 16799999999999999988754
No 234
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.30 E-value=1.8e-12 Score=115.56 Aligned_cols=112 Identities=14% Similarity=0.224 Sum_probs=86.0
Q ss_pred HHHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCC
Q 018003 163 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL 242 (362)
Q Consensus 163 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~ 242 (362)
....+.+.+.+...++.+|||+|||+|.++..+++.+. +|+|+|+++.+++.+++++... .++.++++|+..+
T Consensus 16 ~~~~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~~~--~v~~vD~~~~~~~~a~~~~~~~-----~~v~~~~~D~~~~ 88 (244)
T 1qam_A 16 KHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRCN--FVTAIEIDHKLCKTTENKLVDH-----DNFQVLNKDILQF 88 (244)
T ss_dssp HHHHHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHHSS--EEEEECSCHHHHHHHHHHTTTC-----CSEEEECCCGGGC
T ss_pred HHHHHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHcCC--eEEEEECCHHHHHHHHHhhccC-----CCeEEEEChHHhC
Confidence 45567778888777889999999999999999999874 9999999999999999986542 5899999999998
Q ss_pred CCCC-CcceEEEec-----------ccccCCCCHHHHH----HHHHhhccCCcEEE
Q 018003 243 PFAS-SSIDAVHAG-----------AAIHCWSSPSTGV----AEISRVLRPGGVFV 282 (362)
Q Consensus 243 p~~~-~~fD~V~~~-----------~vl~h~~d~~~~l----~~i~r~LkpgG~li 282 (362)
++++ ..|+ |+++ ..++|...+..++ +.+.|+++|+|.+.
T Consensus 89 ~~~~~~~~~-vv~nlPy~~~~~~l~~~l~~~~~~~~~lm~q~e~a~rll~~~G~l~ 143 (244)
T 1qam_A 89 KFPKNQSYK-IFGNIPYNISTDIIRKIVFDSIADEIYLIVEYGFAKRLLNTKRSLA 143 (244)
T ss_dssp CCCSSCCCE-EEEECCGGGHHHHHHHHHHSCCCSEEEEEEEHHHHHHHTCTTSHHH
T ss_pred CcccCCCeE-EEEeCCcccCHHHHHHHHhcCCCCeEEEEEEHHHHHHHhcCCcchh
Confidence 8764 4564 4433 3344444444444 44788888888654
No 235
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.29 E-value=5.3e-12 Score=114.96 Aligned_cols=111 Identities=14% Similarity=0.148 Sum_probs=85.9
Q ss_pred CCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcC-CCCCCCEEEEEecCCCC-CCCCCcceEEE
Q 018003 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-NFPKENFLLVRADISRL-PFASSSIDAVH 253 (362)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~~~~~~~~~d~~~~-p~~~~~fD~V~ 253 (362)
.++.+|||+|||+|.++..+++..+..+++++|+++.+++.|++++.... +...+++.++.+|+... +...++||+|+
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 156 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEE
Confidence 34679999999999999999887666799999999999999999875420 00146899999998653 32357899999
Q ss_pred ecccccCCCCH----HHHHHHHHhhccCCcEEEEEEE
Q 018003 254 AGAAIHCWSSP----STGVAEISRVLRPGGVFVGTTY 286 (362)
Q Consensus 254 ~~~vl~h~~d~----~~~l~~i~r~LkpgG~li~~~~ 286 (362)
+....++.+.. ..+++++.++|||||++++...
T Consensus 157 ~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 193 (283)
T 2i7c_A 157 VDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCE 193 (283)
T ss_dssp EECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECC
T ss_pred EcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECC
Confidence 86543222211 5889999999999999998743
No 236
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.29 E-value=3.4e-12 Score=117.73 Aligned_cols=108 Identities=14% Similarity=0.132 Sum_probs=81.9
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcC-CCCCCCEEEEEecCCC-CCCCCCcceEEEe
Q 018003 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-NFPKENFLLVRADISR-LPFASSSIDAVHA 254 (362)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~~~~~~~~~d~~~-~p~~~~~fD~V~~ 254 (362)
++.+|||||||+|..+..+++..+..+++++|+++.+++.|++++.... +...+++.++.+|+.. ++..+++||+|++
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~ 187 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVIIT 187 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEEE
Confidence 3579999999999999999987666799999999999999999875420 0014689999999865 3334678999998
Q ss_pred cccccCCCCH-----HHHHHHHHhhccCCcEEEEEE
Q 018003 255 GAAIHCWSSP-----STGVAEISRVLRPGGVFVGTT 285 (362)
Q Consensus 255 ~~vl~h~~d~-----~~~l~~i~r~LkpgG~li~~~ 285 (362)
... +++..+ ..+++++.++|||||++++..
T Consensus 188 d~~-~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 188 DSS-DPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp CCC--------------HHHHHHHHEEEEEEEEEEC
T ss_pred cCC-CCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 653 333211 578999999999999999865
No 237
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.26 E-value=9.1e-12 Score=113.30 Aligned_cols=107 Identities=12% Similarity=0.096 Sum_probs=83.3
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcC-CC-------CCCCEEEEEecCCCC-CCCCC
Q 018003 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-NF-------PKENFLLVRADISRL-PFASS 247 (362)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~-~~-------~~~~~~~~~~d~~~~-p~~~~ 247 (362)
++.+|||||||+|.++..+++. +..+++++|+++.+++.|++++ ... +. ..+++.++.+|+... +. ++
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~ 151 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NR 151 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CC
T ss_pred CCCeEEEEcCCcCHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcc-cC
Confidence 4679999999999999999988 5679999999999999999987 220 00 246899999997542 22 57
Q ss_pred cceEEEecccccCCCC-----HHHHHHHHHhhccCCcEEEEEEEc
Q 018003 248 SIDAVHAGAAIHCWSS-----PSTGVAEISRVLRPGGVFVGTTYI 287 (362)
Q Consensus 248 ~fD~V~~~~vl~h~~d-----~~~~l~~i~r~LkpgG~li~~~~~ 287 (362)
+||+|++.... ++.. ...+++++.++|||||++++....
T Consensus 152 ~fD~Ii~d~~~-~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~ 195 (281)
T 1mjf_A 152 GFDVIIADSTD-PVGPAKVLFSEEFYRYVYDALNNPGIYVTQAGS 195 (281)
T ss_dssp CEEEEEEECCC-CC-----TTSHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred CeeEEEECCCC-CCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 89999986543 2211 257899999999999999987543
No 238
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.26 E-value=1.9e-11 Score=116.66 Aligned_cols=109 Identities=17% Similarity=0.157 Sum_probs=87.4
Q ss_pred CCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCC-CCCEEEEEecCCCCCC----CCCcce
Q 018003 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFP-KENFLLVRADISRLPF----ASSSID 250 (362)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~-~~~~~~~~~d~~~~p~----~~~~fD 250 (362)
.++.+|||+|||+|.++..+++.+ ..+|+|+|+|+.+++.|+++++.+ +. ..++.++++|+..... ...+||
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g-~~~V~~vD~s~~al~~a~~n~~~n--gl~~~~v~~~~~D~~~~~~~~~~~~~~fD 295 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGG-CSQVVSVDTSQEALDIARQNVELN--KLDLSKAEFVRDDVFKLLRTYRDRGEKFD 295 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHT--TCCGGGEEEEESCHHHHHHHHHHTTCCEE
T ss_pred hCCCeEEEeeccCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHc--CCCccceEEEECCHHHHHHHHHhcCCCCC
Confidence 357899999999999999999986 359999999999999999998876 11 2279999999876421 146899
Q ss_pred EEEecc---------cccCCCCHHHHHHHHHhhccCCcEEEEEEEc
Q 018003 251 AVHAGA---------AIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 287 (362)
Q Consensus 251 ~V~~~~---------vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~ 287 (362)
+|++.- +.++..+...++.++.++|+|||++++++..
T Consensus 296 ~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 341 (396)
T 3c0k_A 296 VIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCS 341 (396)
T ss_dssp EEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 999863 2333355678899999999999999988743
No 239
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.25 E-value=1.8e-11 Score=116.23 Aligned_cols=109 Identities=14% Similarity=0.130 Sum_probs=84.0
Q ss_pred CCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCC-CEEEEEecCCCC-CC---CCCcce
Q 018003 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKE-NFLLVRADISRL-PF---ASSSID 250 (362)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~-~~~~~~~d~~~~-p~---~~~~fD 250 (362)
.++.+|||+|||+|.++..++..+. .+|+|+|+|+.+++.|+++++.+ +... ++.++++|+.+. +. ...+||
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~ga-~~V~~vD~s~~al~~A~~N~~~n--~~~~~~v~~~~~D~~~~l~~~~~~~~~fD 287 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGGA-MATTSVDLAKRSRALSLAHFEAN--HLDMANHQLVVMDVFDYFKYARRHHLTYD 287 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTTB-SEEEEEESCTTHHHHHHHHHHHT--TCCCTTEEEEESCHHHHHHHHHHTTCCEE
T ss_pred cCCCeEEEEeeccCHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHc--CCCccceEEEECCHHHHHHHHHHhCCCcc
Confidence 4578999999999999999998652 48999999999999999998876 1122 899999998653 21 245899
Q ss_pred EEEecccc-----cCCCCH----HHHHHHHHhhccCCcEEEEEEEc
Q 018003 251 AVHAGAAI-----HCWSSP----STGVAEISRVLRPGGVFVGTTYI 287 (362)
Q Consensus 251 ~V~~~~vl-----~h~~d~----~~~l~~i~r~LkpgG~li~~~~~ 287 (362)
+|++.--. .+..+. ..+++++.++|+|||++++++..
T Consensus 288 ~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~ 333 (385)
T 2b78_A 288 IIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNA 333 (385)
T ss_dssp EEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 99985332 233333 35678889999999999988743
No 240
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.24 E-value=3e-11 Score=114.73 Aligned_cols=105 Identities=14% Similarity=0.029 Sum_probs=81.1
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC-CCCCcceEEEec
Q 018003 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-FASSSIDAVHAG 255 (362)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p-~~~~~fD~V~~~ 255 (362)
++.+|||+|||+|.++..++..+. .|+++|+|+.+++.|+++++.+ .....+.++|+.+.. ...+.||+|++.
T Consensus 214 ~g~~VLDlg~GtG~~sl~~a~~ga--~V~avDis~~al~~a~~n~~~n----g~~~~~~~~D~~~~l~~~~~~fD~Ii~d 287 (393)
T 4dmg_A 214 PGERVLDVYSYVGGFALRAARKGA--YALAVDKDLEALGVLDQAALRL----GLRVDIRHGEALPTLRGLEGPFHHVLLD 287 (393)
T ss_dssp TTCEEEEESCTTTHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHH----TCCCEEEESCHHHHHHTCCCCEEEEEEC
T ss_pred CCCeEEEcccchhHHHHHHHHcCC--eEEEEECCHHHHHHHHHHHHHh----CCCCcEEEccHHHHHHHhcCCCCEEEEC
Confidence 488999999999999999999876 6999999999999999998876 222356688886542 213449999986
Q ss_pred ccccC---------CCCHHHHHHHHHhhccCCcEEEEEEEc
Q 018003 256 AAIHC---------WSSPSTGVAEISRVLRPGGVFVGTTYI 287 (362)
Q Consensus 256 ~vl~h---------~~d~~~~l~~i~r~LkpgG~li~~~~~ 287 (362)
..... ..+...+++.+.++|||||.+++.+..
T Consensus 288 pP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s 328 (393)
T 4dmg_A 288 PPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCS 328 (393)
T ss_dssp CCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 43211 123357899999999999999977654
No 241
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.23 E-value=7.4e-14 Score=124.61 Aligned_cols=113 Identities=12% Similarity=0.133 Sum_probs=88.8
Q ss_pred HHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCC
Q 018003 165 EFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF 244 (362)
Q Consensus 165 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~ 244 (362)
..+.+.+.+...++.+|||+|||+|.++..+++.+ .+++|+|+|+.+++.+++++.. ..++.++++|+..+++
T Consensus 17 ~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~~--~~v~~id~~~~~~~~a~~~~~~-----~~~v~~~~~D~~~~~~ 89 (245)
T 1yub_A 17 VLNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKIS--KQVTSIELDSHLFNLSSEKLKL-----NTRVTLIHQDILQFQF 89 (245)
T ss_dssp THHHHHHHCCCCSSEEEEECSCCCSSCSHHHHHHS--SEEEESSSSCSSSSSSSCTTTT-----CSEEEECCSCCTTTTC
T ss_pred HHHHHHHhcCCCCCCEEEEEeCCCCHHHHHHHHhC--CeEEEEECCHHHHHHHHHHhcc-----CCceEEEECChhhcCc
Confidence 34677777777778899999999999999999987 4999999999999998876542 3689999999999887
Q ss_pred CC-CcceEEEecc-----------cccCCCCHHHHH----HHHHhhccCCcEEEEEE
Q 018003 245 AS-SSIDAVHAGA-----------AIHCWSSPSTGV----AEISRVLRPGGVFVGTT 285 (362)
Q Consensus 245 ~~-~~fD~V~~~~-----------vl~h~~d~~~~l----~~i~r~LkpgG~li~~~ 285 (362)
+. ++| .|+++- +++|..++...+ +.+.|+|||||.+++.+
T Consensus 90 ~~~~~f-~vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~ 145 (245)
T 1yub_A 90 PNKQRY-KIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLL 145 (245)
T ss_dssp CCSSEE-EEEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHT
T ss_pred ccCCCc-EEEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhh
Confidence 64 678 566542 234444555556 77999999999887644
No 242
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.22 E-value=2.8e-11 Score=123.21 Aligned_cols=109 Identities=17% Similarity=0.189 Sum_probs=88.0
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCC-CCCCCCcceEEEec
Q 018003 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR-LPFASSSIDAVHAG 255 (362)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~-~p~~~~~fD~V~~~ 255 (362)
++.+|||+|||+|.++..++..+. .+|+++|+|+.+++.|+++++.+ +....++.++++|+.+ ++...++||+|++.
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~ga-~~V~aVD~s~~al~~a~~N~~~n-gl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~D 616 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLGGA-RSTTTVDMSRTYLEWAERNLRLN-GLTGRAHRLIQADCLAWLREANEQFDLIFID 616 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHHHHHT-TCCSTTEEEEESCHHHHHHHCCCCEEEEEEC
T ss_pred CCCcEEEeeechhHHHHHHHHCCC-CEEEEEeCCHHHHHHHHHHHHHc-CCCccceEEEecCHHHHHHhcCCCccEEEEC
Confidence 478999999999999999988764 47999999999999999998876 2222579999999876 34445789999985
Q ss_pred c-----------cccCCCCHHHHHHHHHhhccCCcEEEEEEEc
Q 018003 256 A-----------AIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 287 (362)
Q Consensus 256 ~-----------vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~ 287 (362)
- ++++..+...+++++.++|+|||+|++++..
T Consensus 617 PP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 617 PPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp CCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred CccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 4 2333445668899999999999999987654
No 243
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.22 E-value=6.2e-11 Score=113.87 Aligned_cols=119 Identities=18% Similarity=0.257 Sum_probs=92.1
Q ss_pred cCCCCCcHHHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEE
Q 018003 156 WGGFPGPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSG-LFSLVVALDYSENMLKQCYEFVQQESNFPKENFLL 234 (362)
Q Consensus 156 ~~~~~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~ 234 (362)
.+.++++....+.+.+.+...++.+|||+|||+|.++..++++. +..+++|+|+++.+++.| .++.+
T Consensus 18 ~g~~~TP~~l~~~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a------------~~~~~ 85 (421)
T 2ih2_A 18 LGRVETPPEVVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP------------PWAEG 85 (421)
T ss_dssp ---CCCCHHHHHHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC------------TTEEE
T ss_pred CceEeCCHHHHHHHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC------------CCCcE
Confidence 35677888888999988876567799999999999999998763 446999999999988765 26889
Q ss_pred EEecCCCCCCCCCcceEEEeccccc----------CCCCH-------------------HHHHHHHHhhccCCcEEEEEE
Q 018003 235 VRADISRLPFASSSIDAVHAGAAIH----------CWSSP-------------------STGVAEISRVLRPGGVFVGTT 285 (362)
Q Consensus 235 ~~~d~~~~p~~~~~fD~V~~~~vl~----------h~~d~-------------------~~~l~~i~r~LkpgG~li~~~ 285 (362)
+++|+...+ ..++||+|+++--.. |+.+. ..+++.+.++|+|||++++.+
T Consensus 86 ~~~D~~~~~-~~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~ 164 (421)
T 2ih2_A 86 ILADFLLWE-PGEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVV 164 (421)
T ss_dssp EESCGGGCC-CSSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EeCChhhcC-ccCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEE
Confidence 999997765 346899999962221 12111 156899999999999999998
Q ss_pred Ec
Q 018003 286 YI 287 (362)
Q Consensus 286 ~~ 287 (362)
|.
T Consensus 165 p~ 166 (421)
T 2ih2_A 165 PA 166 (421)
T ss_dssp EG
T ss_pred Ch
Confidence 86
No 244
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.21 E-value=3.5e-11 Score=116.56 Aligned_cols=129 Identities=14% Similarity=0.141 Sum_probs=102.4
Q ss_pred CCCCCcHHHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhC-------------CCCEEEEEeCCHHHHHHHHHHHhh
Q 018003 157 GGFPGPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSG-------------LFSLVVALDYSENMLKQCYEFVQQ 223 (362)
Q Consensus 157 ~~~~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-------------~~~~v~gvD~s~~~~~~a~~~~~~ 223 (362)
+.+++|....+.+.+.+.+.++.+|||.|||+|.++..+.+.. ...+++|+|+++.+++.|+.++..
T Consensus 151 G~fyTP~~v~~~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l 230 (445)
T 2okc_A 151 GQYFTPRPLIQAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYL 230 (445)
T ss_dssp GGGCCCHHHHHHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHH
T ss_pred CcccCcHHHHHHHHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHH
Confidence 4578888988999999888888899999999999998887641 124799999999999999998766
Q ss_pred cCCCCCCCEEEEEecCCCCCCCCCcceEEEecccccCCCC-----------------HHHHHHHHHhhccCCcEEEEEEE
Q 018003 224 ESNFPKENFLLVRADISRLPFASSSIDAVHAGAAIHCWSS-----------------PSTGVAEISRVLRPGGVFVGTTY 286 (362)
Q Consensus 224 ~~~~~~~~~~~~~~d~~~~p~~~~~fD~V~~~~vl~h~~d-----------------~~~~l~~i~r~LkpgG~li~~~~ 286 (362)
. +....++.+.++|....+.. ++||+|+++-.+.+... ...+++++.++|||||++++.+|
T Consensus 231 ~-g~~~~~~~i~~gD~l~~~~~-~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p 308 (445)
T 2okc_A 231 H-GIGTDRSPIVCEDSLEKEPS-TLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLP 308 (445)
T ss_dssp T-TCCSSCCSEEECCTTTSCCS-SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred h-CCCcCCCCEeeCCCCCCccc-CCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEEC
Confidence 5 11112677899998776643 48999999866554321 13789999999999999999987
Q ss_pred c
Q 018003 287 I 287 (362)
Q Consensus 287 ~ 287 (362)
.
T Consensus 309 ~ 309 (445)
T 2okc_A 309 D 309 (445)
T ss_dssp H
T ss_pred C
Confidence 5
No 245
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.21 E-value=1.3e-11 Score=117.14 Aligned_cols=106 Identities=19% Similarity=0.179 Sum_probs=84.6
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCC----CCCcceEE
Q 018003 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF----ASSSIDAV 252 (362)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~----~~~~fD~V 252 (362)
++.+|||+|||+|.++..++... .+|+|+|+|+.+++.|+++++.+ ...++.++++|+..... ..++||+|
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~~--~~v~~vD~s~~~~~~a~~n~~~n---~~~~~~~~~~d~~~~~~~~~~~~~~fD~I 283 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALGF--REVVAVDSSAEALRRAEENARLN---GLGNVRVLEANAFDLLRRLEKEGERFDLV 283 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHHE--EEEEEEESCHHHHHHHHHHHHHT---TCTTEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred CCCeEEEeeeccCHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHHHc---CCCCceEEECCHHHHHHHHHhcCCCeeEE
Confidence 57899999999999999999873 48999999999999999998876 13459999999876431 15689999
Q ss_pred Eecccc---------cCCCCHHHHHHHHHhhccCCcEEEEEEEc
Q 018003 253 HAGAAI---------HCWSSPSTGVAEISRVLRPGGVFVGTTYI 287 (362)
Q Consensus 253 ~~~~vl---------~h~~d~~~~l~~i~r~LkpgG~li~~~~~ 287 (362)
++.--. ....+...++.++.++|+|||.+++++..
T Consensus 284 i~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 327 (382)
T 1wxx_A 284 VLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCS 327 (382)
T ss_dssp EECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 985321 11123457899999999999999988754
No 246
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.21 E-value=2.1e-11 Score=116.35 Aligned_cols=109 Identities=14% Similarity=0.091 Sum_probs=86.5
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCC----CCCcceEE
Q 018003 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF----ASSSIDAV 252 (362)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~----~~~~fD~V 252 (362)
++.+|||+|||+|.++..+++.+ ..+|+|+|+++.+++.|+++++.+ +...++.++++|+.+... ..++||+|
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~g-~~~v~~vD~s~~~l~~a~~n~~~n--~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V 293 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIAG-ADEVIGIDKSPRAIETAKENAKLN--GVEDRMKFIVGSAFEEMEKLQKKGEKFDIV 293 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHT--TCGGGEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHc--CCCccceEEECCHHHHHHHHHhhCCCCCEE
Confidence 57899999999999999999874 358999999999999999998876 112389999999866431 25689999
Q ss_pred Eecccc---------cCCCCHHHHHHHHHhhccCCcEEEEEEEcc
Q 018003 253 HAGAAI---------HCWSSPSTGVAEISRVLRPGGVFVGTTYIV 288 (362)
Q Consensus 253 ~~~~vl---------~h~~d~~~~l~~i~r~LkpgG~li~~~~~~ 288 (362)
++.... ++..+...++.++.++|+|||.+++.+...
T Consensus 294 i~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 338 (396)
T 2as0_A 294 VLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQ 338 (396)
T ss_dssp EECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCT
T ss_pred EECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCC
Confidence 985322 222345678999999999999999887653
No 247
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.20 E-value=6.1e-12 Score=115.62 Aligned_cols=104 Identities=13% Similarity=0.073 Sum_probs=75.3
Q ss_pred CCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeC----CHHHHHHHHHHHhhcCCCCCCCEEEEEe-cCCCCCCCCCcc
Q 018003 175 PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDY----SENMLKQCYEFVQQESNFPKENFLLVRA-DISRLPFASSSI 249 (362)
Q Consensus 175 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~----s~~~~~~a~~~~~~~~~~~~~~~~~~~~-d~~~~p~~~~~f 249 (362)
..++.+|||+|||+|.++..+++.+ +|+|+|+ ++.+++.... + .....++.++++ |+..+| .++|
T Consensus 80 ~~~g~~VLDlGcG~G~~s~~la~~~---~V~gvD~~~~~~~~~~~~~~~--~---~~~~~~v~~~~~~D~~~l~--~~~f 149 (305)
T 2p41_A 80 VTPEGKVVDLGCGRGGWSYYCGGLK---NVREVKGLTKGGPGHEEPIPM--S---TYGWNLVRLQSGVDVFFIP--PERC 149 (305)
T ss_dssp SCCCEEEEEETCTTSHHHHHHHTST---TEEEEEEECCCSTTSCCCCCC--C---STTGGGEEEECSCCTTTSC--CCCC
T ss_pred CCCCCEEEEEcCCCCHHHHHHHhcC---CEEEEeccccCchhHHHHHHh--h---hcCCCCeEEEeccccccCC--cCCC
Confidence 3467899999999999999999873 7999999 5543321110 0 011257899999 888775 5689
Q ss_pred eEEEeccccc---CCCCHH---HHHHHHHhhccCCcEEEEEEEcc
Q 018003 250 DAVHAGAAIH---CWSSPS---TGVAEISRVLRPGGVFVGTTYIV 288 (362)
Q Consensus 250 D~V~~~~vl~---h~~d~~---~~l~~i~r~LkpgG~li~~~~~~ 288 (362)
|+|++..+.+ +..|.. .+|+++.++|||||.|++.++..
T Consensus 150 D~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~~ 194 (305)
T 2p41_A 150 DTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLNP 194 (305)
T ss_dssp SEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESCC
T ss_pred CEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 9999977653 222222 57899999999999999876543
No 248
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.20 E-value=4e-10 Score=108.68 Aligned_cols=112 Identities=17% Similarity=0.223 Sum_probs=86.0
Q ss_pred HHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCC--
Q 018003 164 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR-- 241 (362)
Q Consensus 164 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~-- 241 (362)
...+.+.+.+...++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.|+++++.. ...++.++++|+..
T Consensus 273 ~l~~~~~~~l~~~~~~~VLDlgcG~G~~~~~la~~~--~~V~gvD~s~~al~~A~~n~~~~---~~~~v~f~~~d~~~~l 347 (433)
T 1uwv_A 273 KMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQA--ASVVGVEGVPALVEKGQQNARLN---GLQNVTFYHENLEEDV 347 (433)
T ss_dssp HHHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHT---TCCSEEEEECCTTSCC
T ss_pred HHHHHHHHhhcCCCCCEEEECCCCCCHHHHHHHhhC--CEEEEEeCCHHHHHHHHHHHHHc---CCCceEEEECCHHHHh
Confidence 345666677776678899999999999999999885 49999999999999999998765 13489999999977
Q ss_pred --CCCCCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEE
Q 018003 242 --LPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGT 284 (362)
Q Consensus 242 --~p~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~ 284 (362)
+++.+++||+|++.---... ..+++.+.+ ++|+++++++
T Consensus 348 ~~~~~~~~~fD~Vv~dPPr~g~---~~~~~~l~~-~~p~~ivyvs 388 (433)
T 1uwv_A 348 TKQPWAKNGFDKVLLDPARAGA---AGVMQQIIK-LEPIRIVYVS 388 (433)
T ss_dssp SSSGGGTTCCSEEEECCCTTCC---HHHHHHHHH-HCCSEEEEEE
T ss_pred hhhhhhcCCCCEEEECCCCccH---HHHHHHHHh-cCCCeEEEEE
Confidence 34566789999985322111 245555544 7898888875
No 249
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.19 E-value=6.5e-11 Score=107.55 Aligned_cols=118 Identities=14% Similarity=0.033 Sum_probs=83.9
Q ss_pred cCCCCCCeEEEEcC------ccchHHHHHHHh-CCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEE-EEecCCCCCC
Q 018003 173 LKPVLGGNIIDASC------GSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLL-VRADISRLPF 244 (362)
Q Consensus 173 l~~~~~~~vLDiGc------G~G~~~~~l~~~-~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~-~~~d~~~~p~ 244 (362)
+...++.+|||+|| |+|. ..+++. ++..+|+|+|+++. + .++.+ +++|+..+++
T Consensus 59 l~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-v---------------~~v~~~i~gD~~~~~~ 120 (290)
T 2xyq_A 59 LAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-V---------------SDADSTLIGDCATVHT 120 (290)
T ss_dssp CCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-B---------------CSSSEEEESCGGGCCC
T ss_pred cCCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-C---------------CCCEEEEECccccCCc
Confidence 34567889999999 4466 334444 33579999999997 1 25678 9999988775
Q ss_pred CCCcceEEEecccccC--------C---CCHHHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhcccccc
Q 018003 245 ASSSIDAVHAGAAIHC--------W---SSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVG 313 (362)
Q Consensus 245 ~~~~fD~V~~~~vl~h--------~---~d~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (362)
. ++||+|+++...+. . .....+++++.++|||||.|++..+...
T Consensus 121 ~-~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~------------------------ 175 (290)
T 2xyq_A 121 A-NKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHS------------------------ 175 (290)
T ss_dssp S-SCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSS------------------------
T ss_pred c-CcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccC------------------------
Confidence 4 68999999743221 1 1124789999999999999998764321
Q ss_pred cccccCCHHHHHHHHHHCCCEEEEEE
Q 018003 314 FSIPVLGFDDLKRIFRQFQLVVNLKL 339 (362)
Q Consensus 314 ~~~~~~s~~~l~~ll~~~Gf~~v~~~ 339 (362)
...++.+++++.||..++..
T Consensus 176 ------~~~~l~~~l~~~GF~~v~~~ 195 (290)
T 2xyq_A 176 ------WNADLYKLMGHFSWWTAFVT 195 (290)
T ss_dssp ------CCHHHHHHHTTEEEEEEEEE
T ss_pred ------CHHHHHHHHHHcCCcEEEEE
Confidence 11367788888888766554
No 250
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.16 E-value=1.7e-10 Score=105.25 Aligned_cols=88 Identities=10% Similarity=0.152 Sum_probs=77.4
Q ss_pred HHHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCC
Q 018003 163 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL 242 (362)
Q Consensus 163 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~ 242 (362)
....+.+.+.+...++.+|||||||+|.++..+++.+. +|+|+|+++.+++.+++++.. ..++.++++|+..+
T Consensus 36 ~~i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~~~--~V~aVEid~~li~~a~~~~~~-----~~~v~vi~gD~l~~ 108 (295)
T 3gru_A 36 KNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKNAK--KVYVIEIDKSLEPYANKLKEL-----YNNIEIIWGDALKV 108 (295)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHSS--EEEEEESCGGGHHHHHHHHHH-----CSSEEEEESCTTTS
T ss_pred HHHHHHHHHhcCCCCcCEEEEECCCchHHHHHHHhcCC--EEEEEECCHHHHHHHHHHhcc-----CCCeEEEECchhhC
Confidence 45567788888888889999999999999999999865 999999999999999998874 36899999999999
Q ss_pred CCCCCcceEEEeccc
Q 018003 243 PFASSSIDAVHAGAA 257 (362)
Q Consensus 243 p~~~~~fD~V~~~~v 257 (362)
++++..||+|+++..
T Consensus 109 ~~~~~~fD~Iv~NlP 123 (295)
T 3gru_A 109 DLNKLDFNKVVANLP 123 (295)
T ss_dssp CGGGSCCSEEEEECC
T ss_pred CcccCCccEEEEeCc
Confidence 888888999998754
No 251
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.16 E-value=1.2e-10 Score=106.88 Aligned_cols=109 Identities=17% Similarity=0.198 Sum_probs=80.9
Q ss_pred HHHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCC
Q 018003 163 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL 242 (362)
Q Consensus 163 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~ 242 (362)
....+.+.+.+...++.+|||+|||+|.++..+++.+. +|+|+|+++.+++.+++++... ...++.++++|+..+
T Consensus 28 ~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~~~--~v~~vDi~~~~~~~a~~~~~~~---~~~~v~~~~~D~~~~ 102 (299)
T 2h1r_A 28 PGILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPLAK--KVITIDIDSRMISEVKKRCLYE---GYNNLEVYEGDAIKT 102 (299)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHTTTSS--EEEEECSCHHHHHHHHHHHHHT---TCCCEEC----CCSS
T ss_pred HHHHHHHHHhcCCCCcCEEEEEcCcCcHHHHHHHhcCC--EEEEEECCHHHHHHHHHHHHHc---CCCceEEEECchhhC
Confidence 34456777777777789999999999999999998864 9999999999999999988654 136899999999888
Q ss_pred CCCCCcceEEEecccccCCCCHH--HHH---------------HHHHhhccCCc
Q 018003 243 PFASSSIDAVHAGAAIHCWSSPS--TGV---------------AEISRVLRPGG 279 (362)
Q Consensus 243 p~~~~~fD~V~~~~vl~h~~d~~--~~l---------------~~i~r~LkpgG 279 (362)
++ ++||+|+++...+ +..+. .++ +.+.|+++++|
T Consensus 103 ~~--~~~D~Vv~n~py~-~~~~~~~~ll~~~~~~~~~~l~~Q~e~a~rlla~~G 153 (299)
T 2h1r_A 103 VF--PKFDVCTANIPYK-ISSPLIFKLISHRPLFKCAVLMFQKEFAERMLANVG 153 (299)
T ss_dssp CC--CCCSEEEEECCGG-GHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHTCCTT
T ss_pred Cc--ccCCEEEEcCCcc-cccHHHHHHHhcCCccceeeehHHHHHHHHHhcCCC
Confidence 75 3799999865433 33332 223 44678888877
No 252
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.13 E-value=2.4e-10 Score=106.62 Aligned_cols=106 Identities=14% Similarity=0.151 Sum_probs=85.0
Q ss_pred HHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCCCC
Q 018003 168 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASS 247 (362)
Q Consensus 168 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~~~ 247 (362)
.+...+. ++.+|||+|||+|.++.. ++. ..+|+|+|+|+.+++.|+++++.+ +...++.++++|+.... +
T Consensus 188 ~i~~~~~--~~~~VLDlg~G~G~~~l~-a~~--~~~V~~vD~s~~ai~~a~~n~~~n--~l~~~v~~~~~D~~~~~---~ 257 (336)
T 2yx1_A 188 RIMKKVS--LNDVVVDMFAGVGPFSIA-CKN--AKKIYAIDINPHAIELLKKNIKLN--KLEHKIIPILSDVREVD---V 257 (336)
T ss_dssp HHHHHCC--TTCEEEETTCTTSHHHHH-TTT--SSEEEEEESCHHHHHHHHHHHHHT--TCTTTEEEEESCGGGCC---C
T ss_pred HHHHhcC--CCCEEEEccCccCHHHHh-ccC--CCEEEEEECCHHHHHHHHHHHHHc--CCCCcEEEEECChHHhc---C
Confidence 3344443 478999999999999998 763 469999999999999999998876 22357999999998765 7
Q ss_pred cceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEc
Q 018003 248 SIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 287 (362)
Q Consensus 248 ~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~ 287 (362)
+||+|++... .....+++++.++|+|||.+++.+..
T Consensus 258 ~fD~Vi~dpP----~~~~~~l~~~~~~L~~gG~l~~~~~~ 293 (336)
T 2yx1_A 258 KGNRVIMNLP----KFAHKFIDKALDIVEEGGVIHYYTIG 293 (336)
T ss_dssp CEEEEEECCT----TTGGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred CCcEEEECCc----HhHHHHHHHHHHHcCCCCEEEEEEee
Confidence 8999998532 12237899999999999999988765
No 253
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.13 E-value=2.4e-10 Score=108.54 Aligned_cols=136 Identities=14% Similarity=0.051 Sum_probs=99.1
Q ss_pred hhhhhhhccCCCCCcHHHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCC--------------------------
Q 018003 148 RGWRQNFVWGGFPGPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLF-------------------------- 201 (362)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~-------------------------- 201 (362)
++||... ...+-.+.....++......++..|||.+||+|.++..++..+.+
T Consensus 174 rgyr~~~--~~Apl~e~lAa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~ 251 (393)
T 3k0b_A 174 RGYRLAQ--GSAPIKETMAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADAR 251 (393)
T ss_dssp CSTTTTS--CSCSCCHHHHHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHH
T ss_pred cccccCC--CCCCCcHHHHHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHH
Confidence 4455432 223334566677777777777889999999999999888765432
Q ss_pred ------------CEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCCCCcceEEEecccc-cCC---CCHH
Q 018003 202 ------------SLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAGAAI-HCW---SSPS 265 (362)
Q Consensus 202 ------------~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~~~~fD~V~~~~vl-~h~---~d~~ 265 (362)
.+++|+|+++.+++.|++++... +...++.+.++|+.+++.+ .+||+|+++--. +.+ .+..
T Consensus 252 ~~a~~~~~~~~~~~V~GvDid~~al~~Ar~Na~~~--gl~~~I~~~~~D~~~~~~~-~~fD~Iv~NPPYg~rl~~~~~l~ 328 (393)
T 3k0b_A 252 QEAEDLANYDQPLNIIGGDIDARLIEIAKQNAVEA--GLGDLITFRQLQVADFQTE-DEYGVVVANPPYGERLEDEEAVR 328 (393)
T ss_dssp HHHHHHCCTTCCCCEEEEESCHHHHHHHHHHHHHT--TCTTCSEEEECCGGGCCCC-CCSCEEEECCCCCCSHHHHHHHH
T ss_pred HHHHHhhcccCCceEEEEECCHHHHHHHHHHHHHc--CCCCceEEEECChHhCCCC-CCCCEEEECCCCccccCCchhHH
Confidence 46999999999999999998876 2234699999999988754 589999998432 112 1234
Q ss_pred HHHHHHHhhccC--CcEEEEEEEcc
Q 018003 266 TGVAEISRVLRP--GGVFVGTTYIV 288 (362)
Q Consensus 266 ~~l~~i~r~Lkp--gG~li~~~~~~ 288 (362)
.+.+++.+.||+ ||.+++.+...
T Consensus 329 ~ly~~lg~~lk~~~g~~~~iit~~~ 353 (393)
T 3k0b_A 329 QLYREMGIVYKRMPTWSVYVLTSYE 353 (393)
T ss_dssp HHHHHHHHHHHTCTTCEEEEEECCT
T ss_pred HHHHHHHHHHhcCCCCEEEEEECCH
Confidence 566777777776 99999887653
No 254
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.11 E-value=9.3e-10 Score=105.60 Aligned_cols=99 Identities=21% Similarity=0.226 Sum_probs=77.8
Q ss_pred CCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCCCCcceEEEec
Q 018003 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAG 255 (362)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~~~~fD~V~~~ 255 (362)
.++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.|+++++.+ + .. +.++++|+.++.. . +||+|++.
T Consensus 289 ~~~~~VLDlgcG~G~~sl~la~~~~--~V~gvD~s~~ai~~A~~n~~~n-g--l~-v~~~~~d~~~~~~-~-~fD~Vv~d 360 (425)
T 2jjq_A 289 VEGEKILDMYSGVGTFGIYLAKRGF--NVKGFDSNEFAIEMARRNVEIN-N--VD-AEFEVASDREVSV-K-GFDTVIVD 360 (425)
T ss_dssp CCSSEEEEETCTTTHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHH-T--CC-EEEEECCTTTCCC-T-TCSEEEEC
T ss_pred CCCCEEEEeeccchHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHHc-C--Cc-EEEEECChHHcCc-c-CCCEEEEc
Confidence 4578999999999999999998765 9999999999999999998776 1 23 9999999988753 2 89999985
Q ss_pred ccccCCCCHHHHHHHHHhhccCCcEEEEEE
Q 018003 256 AAIHCWSSPSTGVAEISRVLRPGGVFVGTT 285 (362)
Q Consensus 256 ~vl~h~~d~~~~l~~i~r~LkpgG~li~~~ 285 (362)
-.-.. -...+++.+. .|+|||+++++.
T Consensus 361 PPr~g--~~~~~~~~l~-~l~p~givyvsc 387 (425)
T 2jjq_A 361 PPRAG--LHPRLVKRLN-REKPGVIVYVSC 387 (425)
T ss_dssp CCTTC--SCHHHHHHHH-HHCCSEEEEEES
T ss_pred CCccc--hHHHHHHHHH-hcCCCcEEEEEC
Confidence 43211 1234566665 599999999874
No 255
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.09 E-value=5.2e-10 Score=105.83 Aligned_cols=123 Identities=12% Similarity=0.051 Sum_probs=94.9
Q ss_pred cHHHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCC--------------------------------------CE
Q 018003 162 PEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLF--------------------------------------SL 203 (362)
Q Consensus 162 ~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~--------------------------------------~~ 203 (362)
.+.....++......++..+||.+||+|.++..++..+.+ .+
T Consensus 179 ~e~LAaall~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~ 258 (384)
T 3ldg_A 179 KENMAAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLD 258 (384)
T ss_dssp CHHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCC
T ss_pred cHHHHHHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCce
Confidence 3556666777777777889999999999999888765432 46
Q ss_pred EEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCCCCcceEEEecccc-cCCC---CHHHHHHHHHhhccC--
Q 018003 204 VVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAGAAI-HCWS---SPSTGVAEISRVLRP-- 277 (362)
Q Consensus 204 v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~~~~fD~V~~~~vl-~h~~---d~~~~l~~i~r~Lkp-- 277 (362)
++|+|+++.+++.|+++++.. +....+.+.++|+.+++.+ .+||+|+++--. +.+. +...+.+++.+.||+
T Consensus 259 v~GvDid~~al~~Ar~Na~~~--gl~~~I~~~~~D~~~l~~~-~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~ 335 (384)
T 3ldg_A 259 ISGFDFDGRMVEIARKNAREV--GLEDVVKLKQMRLQDFKTN-KINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLK 335 (384)
T ss_dssp EEEEESCHHHHHHHHHHHHHT--TCTTTEEEEECCGGGCCCC-CCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCT
T ss_pred EEEEECCHHHHHHHHHHHHHc--CCCCceEEEECChHHCCcc-CCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCC
Confidence 999999999999999998876 2234699999999988754 489999998442 2232 334677777778876
Q ss_pred CcEEEEEEEc
Q 018003 278 GGVFVGTTYI 287 (362)
Q Consensus 278 gG~li~~~~~ 287 (362)
||.+++.++.
T Consensus 336 g~~~~iit~~ 345 (384)
T 3ldg_A 336 TWSQFILTND 345 (384)
T ss_dssp TSEEEEEESC
T ss_pred CcEEEEEECC
Confidence 9999988764
No 256
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.07 E-value=6.6e-10 Score=105.36 Aligned_cols=124 Identities=15% Similarity=0.035 Sum_probs=95.6
Q ss_pred CcHHHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCC--------------------------------------C
Q 018003 161 GPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLF--------------------------------------S 202 (362)
Q Consensus 161 ~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~--------------------------------------~ 202 (362)
-.+.....+.......++.+|||.+||+|.++..++..+.+ .
T Consensus 179 l~e~lAa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~ 258 (385)
T 3ldu_A 179 IRETLAAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKF 258 (385)
T ss_dssp CCHHHHHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCC
T ss_pred CcHHHHHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCc
Confidence 34556677777777778899999999999999888776322 4
Q ss_pred EEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCCCCcceEEEeccccc-CC---CCHHHHHHHHHhhccC-
Q 018003 203 LVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAGAAIH-CW---SSPSTGVAEISRVLRP- 277 (362)
Q Consensus 203 ~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~~~~fD~V~~~~vl~-h~---~d~~~~l~~i~r~Lkp- 277 (362)
+|+|+|+++.+++.|++++... +...++.+.++|+.+++.+ ++||+|+++--.. .+ .+...+.+++.+.||+
T Consensus 259 ~V~GvDid~~ai~~Ar~Na~~~--gl~~~i~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~ 335 (385)
T 3ldu_A 259 KIYGYDIDEESIDIARENAEIA--GVDEYIEFNVGDATQFKSE-DEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKL 335 (385)
T ss_dssp CEEEEESCHHHHHHHHHHHHHH--TCGGGEEEEECCGGGCCCS-CBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTS
T ss_pred eEEEEECCHHHHHHHHHHHHHc--CCCCceEEEECChhhcCcC-CCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhC
Confidence 7999999999999999998876 2234799999999888754 5899999976532 22 2334677777778877
Q ss_pred -CcEEEEEEEc
Q 018003 278 -GGVFVGTTYI 287 (362)
Q Consensus 278 -gG~li~~~~~ 287 (362)
||.+++.+..
T Consensus 336 ~g~~~~iit~~ 346 (385)
T 3ldu_A 336 KNWSYYLITSY 346 (385)
T ss_dssp BSCEEEEEESC
T ss_pred CCCEEEEEECC
Confidence 8988888764
No 257
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.05 E-value=7.4e-10 Score=98.97 Aligned_cols=85 Identities=11% Similarity=0.197 Sum_probs=71.5
Q ss_pred HHHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCC
Q 018003 163 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL 242 (362)
Q Consensus 163 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~ 242 (362)
....+.+.+.+...++.+|||||||+|.++..+++.+. +|+|+|+++.+++.+++++... .++.++++|+..+
T Consensus 15 ~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~--~V~avEid~~~~~~~~~~~~~~-----~~v~~i~~D~~~~ 87 (255)
T 3tqs_A 15 SFVLQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTECD--NLALVEIDRDLVAFLQKKYNQQ-----KNITIYQNDALQF 87 (255)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEECCTTTTTHHHHTTTSS--EEEEEECCHHHHHHHHHHHTTC-----TTEEEEESCTTTC
T ss_pred HHHHHHHHHhcCCCCcCEEEEEcccccHHHHHHHHhCC--EEEEEECCHHHHHHHHHHHhhC-----CCcEEEEcchHhC
Confidence 44567788888888899999999999999999999874 9999999999999999987653 6899999999998
Q ss_pred CCCC----CcceEEEec
Q 018003 243 PFAS----SSIDAVHAG 255 (362)
Q Consensus 243 p~~~----~~fD~V~~~ 255 (362)
++++ +.|| |+++
T Consensus 88 ~~~~~~~~~~~~-vv~N 103 (255)
T 3tqs_A 88 DFSSVKTDKPLR-VVGN 103 (255)
T ss_dssp CGGGSCCSSCEE-EEEE
T ss_pred CHHHhccCCCeE-EEec
Confidence 7643 4688 5544
No 258
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.03 E-value=2.9e-09 Score=97.86 Aligned_cols=117 Identities=14% Similarity=0.070 Sum_probs=85.4
Q ss_pred HHHhhcCCCCCCeEEEEcCccchHHHHHHHh-CCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCCC
Q 018003 168 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 246 (362)
Q Consensus 168 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~~ 246 (362)
.+...+.+.++.+|||+|||+|..+..+++. +..+.|+++|+++.+++.+++++++. +..++.++++|+..++...
T Consensus 93 l~~~~l~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~---g~~~v~~~~~D~~~~~~~~ 169 (309)
T 2b9e_A 93 LPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARA---GVSCCELAEEDFLAVSPSD 169 (309)
T ss_dssp HHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHT---TCCSEEEEECCGGGSCTTC
T ss_pred HHHHHhCCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHc---CCCeEEEEeCChHhcCccc
Confidence 3444566778999999999999999998886 33469999999999999999999876 2357999999997765322
Q ss_pred ---CcceEEEec------ccccCCCC-----------H-------HHHHHHHHhhccCCcEEEEEEEcc
Q 018003 247 ---SSIDAVHAG------AAIHCWSS-----------P-------STGVAEISRVLRPGGVFVGTTYIV 288 (362)
Q Consensus 247 ---~~fD~V~~~------~vl~h~~d-----------~-------~~~l~~i~r~LkpgG~li~~~~~~ 288 (362)
++||.|++. .++..-+| . ..+|+.+.++|+ ||+++.+|-..
T Consensus 170 ~~~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~ 237 (309)
T 2b9e_A 170 PRYHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSL 237 (309)
T ss_dssp GGGTTEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCC
T ss_pred cccCCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCC
Confidence 579999973 22322111 1 146777888887 99988876543
No 259
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=99.01 E-value=1.3e-08 Score=95.58 Aligned_cols=164 Identities=12% Similarity=0.071 Sum_probs=101.9
Q ss_pred CCeEEEEcCccchHHHHHHH--------h-------CCCCEEEEEeCCHHHHHHHHHHHhhcCC---------CCCCC--
Q 018003 178 GGNIIDASCGSGLFSRIFAK--------S-------GLFSLVVALDYSENMLKQCYEFVQQESN---------FPKEN-- 231 (362)
Q Consensus 178 ~~~vLDiGcG~G~~~~~l~~--------~-------~~~~~v~gvD~s~~~~~~a~~~~~~~~~---------~~~~~-- 231 (362)
..+|+|+|||+|.++..+.. . .+..+|+.-|+-.+.....=+.+....+ ....+
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 57899999999999877622 1 1556888999877654444333332100 00001
Q ss_pred -EEEEEecCCCCCCCCCcceEEEecccccCCCC--------------------------------------HHHHHHHHH
Q 018003 232 -FLLVRADISRLPFASSSIDAVHAGAAIHCWSS--------------------------------------PSTGVAEIS 272 (362)
Q Consensus 232 -~~~~~~d~~~~p~~~~~fD~V~~~~vl~h~~d--------------------------------------~~~~l~~i~ 272 (362)
+.-+.+.+..-.+++++||+|+++.+||++.+ ...+|+..+
T Consensus 133 f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra 212 (374)
T 3b5i_A 133 FVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARA 212 (374)
T ss_dssp EEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22233444445688999999999999999873 234688899
Q ss_pred hhccCCcEEEEEEEccCCCCcch---------hhhHHH-HHhhhhc------ccccccccccCCHHHHHHHHH-HCCCEE
Q 018003 273 RVLRPGGVFVGTTYIVDGPFNLI---------PFSRLL-RQVCFLD------LKIVGFSIPVLGFDDLKRIFR-QFQLVV 335 (362)
Q Consensus 273 r~LkpgG~li~~~~~~~~~~~~~---------~~~~~~-~~~~~~~------~~~~~~~~~~~s~~~l~~ll~-~~Gf~~ 335 (362)
+.|+|||+++++........... ..+... ....... .........+.+.++++.+++ ..||++
T Consensus 213 ~eL~pGG~mvl~~~gr~~~~~~~~~~~~~~~~~~l~~al~~l~~eG~i~~e~~d~f~~P~y~ps~~E~~~~l~~~~~F~I 292 (374)
T 3b5i_A 213 AEVKRGGAMFLVCLGRTSVDPTDQGGAGLLFGTHFQDAWDDLVREGLVAAEKRDGFNIPVYAPSLQDFKEVVDANGSFAI 292 (374)
T ss_dssp HHEEEEEEEEEEEEECCCSSTTCCHHHHHHHSSHHHHHHHHTTSSSSSCHHHHSSCCCCBCCCCHHHHHHHHHHHCSEEE
T ss_pred HHhCCCCEEEEEEecCCCCccccccchhhHHHHHHHHHHHHHHHhCCcchhhcccCCccccCCCHHHHHHHHHhcCCcEE
Confidence 99999999999999775432111 011111 1100000 000111456789999999998 599987
Q ss_pred EEEEEe
Q 018003 336 NLKLFY 341 (362)
Q Consensus 336 v~~~~~ 341 (362)
.....+
T Consensus 293 ~~le~~ 298 (374)
T 3b5i_A 293 DKLVVY 298 (374)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 665544
No 260
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.99 E-value=1.1e-09 Score=98.61 Aligned_cols=86 Identities=17% Similarity=0.200 Sum_probs=73.1
Q ss_pred HHHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCC
Q 018003 163 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL 242 (362)
Q Consensus 163 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~ 242 (362)
...++.+.+.+...++ +|||||||+|.++..+++.+. +|+|+|+++.+++.+++++.. .++.++++|+..+
T Consensus 33 ~~i~~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~~~--~V~avEid~~~~~~l~~~~~~------~~v~vi~~D~l~~ 103 (271)
T 3fut_A 33 EAHLRRIVEAARPFTG-PVFEVGPGLGALTRALLEAGA--EVTAIEKDLRLRPVLEETLSG------LPVRLVFQDALLY 103 (271)
T ss_dssp HHHHHHHHHHHCCCCS-CEEEECCTTSHHHHHHHHTTC--CEEEEESCGGGHHHHHHHTTT------SSEEEEESCGGGS
T ss_pred HHHHHHHHHhcCCCCC-eEEEEeCchHHHHHHHHHcCC--EEEEEECCHHHHHHHHHhcCC------CCEEEEECChhhC
Confidence 4556788888888888 999999999999999999874 999999999999999998642 4899999999988
Q ss_pred CCCCC-cceEEEeccc
Q 018003 243 PFASS-SIDAVHAGAA 257 (362)
Q Consensus 243 p~~~~-~fD~V~~~~v 257 (362)
++++. .+|.|+++--
T Consensus 104 ~~~~~~~~~~iv~NlP 119 (271)
T 3fut_A 104 PWEEVPQGSLLVANLP 119 (271)
T ss_dssp CGGGSCTTEEEEEEEC
T ss_pred ChhhccCccEEEecCc
Confidence 77643 6898887754
No 261
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.99 E-value=9.6e-10 Score=108.70 Aligned_cols=130 Identities=12% Similarity=0.024 Sum_probs=99.9
Q ss_pred cCCCCCcHHHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhC----C--------------CCEEEEEeCCHHHHHHH
Q 018003 156 WGGFPGPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSG----L--------------FSLVVALDYSENMLKQC 217 (362)
Q Consensus 156 ~~~~~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~----~--------------~~~v~gvD~s~~~~~~a 217 (362)
.+.+++|....+.+.+.+.+.++.+|||.+||+|.++..+.+.. . ...++|+|+++.+++.|
T Consensus 148 ~G~fyTP~~iv~~mv~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA 227 (541)
T 2ar0_A 148 AGQYFTPRPLIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLA 227 (541)
T ss_dssp --CCCCCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHH
T ss_pred CCeeeCCHHHHHHHHHHhccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHH
Confidence 35688888888888888888888999999999999988776541 0 13799999999999999
Q ss_pred HHHHhhcCCCCCCC-----EEEEEecCCCCC-CCCCcceEEEecccccCCCC--------------HHHHHHHHHhhccC
Q 018003 218 YEFVQQESNFPKEN-----FLLVRADISRLP-FASSSIDAVHAGAAIHCWSS--------------PSTGVAEISRVLRP 277 (362)
Q Consensus 218 ~~~~~~~~~~~~~~-----~~~~~~d~~~~p-~~~~~fD~V~~~~vl~h~~d--------------~~~~l~~i~r~Lkp 277 (362)
+.++... + ... ..+.++|....+ ...+.||+|+++--+..... ...++..+.+.|||
T Consensus 228 ~~nl~l~-g--i~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~ 304 (541)
T 2ar0_A 228 LMNCLLH-D--IEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHP 304 (541)
T ss_dssp HHHHHTT-T--CCCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEE
T ss_pred HHHHHHh-C--CCccccccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCC
Confidence 9887654 1 122 678899986643 34578999999855433211 23789999999999
Q ss_pred CcEEEEEEEcc
Q 018003 278 GGVFVGTTYIV 288 (362)
Q Consensus 278 gG~li~~~~~~ 288 (362)
||++.+.+|..
T Consensus 305 gGr~a~V~p~~ 315 (541)
T 2ar0_A 305 GGRAAVVVPDN 315 (541)
T ss_dssp EEEEEEEEEHH
T ss_pred CCEEEEEecCc
Confidence 99999998753
No 262
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.96 E-value=4.7e-09 Score=98.62 Aligned_cols=159 Identities=14% Similarity=0.028 Sum_probs=100.4
Q ss_pred CCeEEEEcCccchHHHHHHHh-----------------CCCCEEEEEeCC-----------HHHHHHHHHHHhhcCCCCC
Q 018003 178 GGNIIDASCGSGLFSRIFAKS-----------------GLFSLVVALDYS-----------ENMLKQCYEFVQQESNFPK 229 (362)
Q Consensus 178 ~~~vLDiGcG~G~~~~~l~~~-----------------~~~~~v~gvD~s-----------~~~~~~a~~~~~~~~~~~~ 229 (362)
..+|+|+||++|.++..+... .|..+|+..|+- +.+.+..++.. +..
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~-----g~~ 127 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKEN-----GRK 127 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHT-----CCC
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhc-----cCC
Confidence 468999999999998877664 244678899987 44433332221 111
Q ss_pred CCEEEEEecCC---CCCCCCCcceEEEecccccCCCCHH---------------------------------------HH
Q 018003 230 ENFLLVRADIS---RLPFASSSIDAVHAGAAIHCWSSPS---------------------------------------TG 267 (362)
Q Consensus 230 ~~~~~~~~d~~---~~p~~~~~fD~V~~~~vl~h~~d~~---------------------------------------~~ 267 (362)
.+..++.+... .-.|+++++|+|+++.+||++.+.. .+
T Consensus 128 ~~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~F 207 (384)
T 2efj_A 128 IGSCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTF 207 (384)
T ss_dssp TTSEEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 23456665543 3468899999999999999986532 12
Q ss_pred HHHHHhhccCCcEEEEEEEccCCC--Ccch-hhhHHHHHh-hhh------cccccccccccCCHHHHHHHHHHCC-CEEE
Q 018003 268 VAEISRVLRPGGVFVGTTYIVDGP--FNLI-PFSRLLRQV-CFL------DLKIVGFSIPVLGFDDLKRIFRQFQ-LVVN 336 (362)
Q Consensus 268 l~~i~r~LkpgG~li~~~~~~~~~--~~~~-~~~~~~~~~-~~~------~~~~~~~~~~~~s~~~l~~ll~~~G-f~~v 336 (362)
|+..++.|+|||+++++....... .+.. ..+...... ... ..........+.+.++++.++++.| |++.
T Consensus 208 L~~Ra~eL~pGG~mvl~~~gr~~~~~~~~~~~~l~~al~~lv~eGli~~ek~dsf~~P~y~ps~~E~~~~le~~g~F~i~ 287 (384)
T 2efj_A 208 LRIHSEELISRGRMLLTFICKEDEFDHPNSMDLLEMSINDLVIEGHLEEEKLDSFNVPIYAPSTEEVKRIVEEEGSFEIL 287 (384)
T ss_dssp HHHHHHHEEEEEEEEEEEECCCTTTCCCCHHHHHHHHHHHHHHHTSSCHHHHHTCCCSBCCCCHHHHHHHHHHHCSEEEE
T ss_pred HHHHHHHhccCCeEEEEEecCCCcccCcccHHHHHHHHHHHHHhCCcchhhhcccCCcccCCCHHHHHHHHHHcCCceEE
Confidence 666689999999999999987653 2110 012221110 000 0011111467789999999999985 6666
Q ss_pred EEEEe
Q 018003 337 LKLFY 341 (362)
Q Consensus 337 ~~~~~ 341 (362)
....+
T Consensus 288 ~le~~ 292 (384)
T 2efj_A 288 YLETF 292 (384)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 55443
No 263
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.95 E-value=1.4e-09 Score=101.00 Aligned_cols=110 Identities=14% Similarity=0.203 Sum_probs=81.5
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCC--CCC---CCEEEEEecCCCCCC----CCC
Q 018003 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESN--FPK---ENFLLVRADISRLPF----ASS 247 (362)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~--~~~---~~~~~~~~d~~~~p~----~~~ 247 (362)
++.+||+||||+|.++..+++.++ .+|+++|+++.+++.|++.+....+ ... ++++++.+|+....- ..+
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~-~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~ 266 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKP-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 266 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCC-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCEEEEEECChhHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCC
Confidence 468999999999999999988875 7999999999999999998753200 011 279999999876431 357
Q ss_pred cceEEEecccc-cCCCCH-----HHHHHHH----HhhccCCcEEEEEEEc
Q 018003 248 SIDAVHAGAAI-HCWSSP-----STGVAEI----SRVLRPGGVFVGTTYI 287 (362)
Q Consensus 248 ~fD~V~~~~vl-~h~~d~-----~~~l~~i----~r~LkpgG~li~~~~~ 287 (362)
+||+|++.-.- ..-..| ..+++.+ .++|+|||++++..-.
T Consensus 267 ~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s 316 (364)
T 2qfm_A 267 EFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNC 316 (364)
T ss_dssp CEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred CceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCC
Confidence 89999986432 111123 4666776 8999999999987543
No 264
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.94 E-value=1.5e-09 Score=99.17 Aligned_cols=87 Identities=16% Similarity=0.235 Sum_probs=72.8
Q ss_pred HHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC--
Q 018003 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-- 243 (362)
Q Consensus 166 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p-- 243 (362)
.+.+.+.+...++.+|||+|||+|.++..+++..+..+|+|+|.|+.+++.|+++++.. ..++.++++|+..++
T Consensus 15 l~e~l~~L~~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~----g~~v~~v~~d~~~l~~~ 90 (301)
T 1m6y_A 15 VREVIEFLKPEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEF----SDRVSLFKVSYREADFL 90 (301)
T ss_dssp HHHHHHHHCCCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGG----TTTEEEEECCGGGHHHH
T ss_pred HHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhc----CCcEEEEECCHHHHHHH
Confidence 45666777777889999999999999999999865679999999999999999998776 268999999998775
Q ss_pred CCC---CcceEEEecc
Q 018003 244 FAS---SSIDAVHAGA 256 (362)
Q Consensus 244 ~~~---~~fD~V~~~~ 256 (362)
+.. ++||.|++..
T Consensus 91 l~~~g~~~~D~Vl~D~ 106 (301)
T 1m6y_A 91 LKTLGIEKVDGILMDL 106 (301)
T ss_dssp HHHTTCSCEEEEEEEC
T ss_pred HHhcCCCCCCEEEEcC
Confidence 221 5799999754
No 265
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.92 E-value=2.7e-09 Score=100.71 Aligned_cols=111 Identities=14% Similarity=0.183 Sum_probs=82.6
Q ss_pred HHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC
Q 018003 164 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP 243 (362)
Q Consensus 164 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p 243 (362)
.....+.+.+... +.+|||+|||+|.++..+++... +|+|+|+++.+++.|+++++.+ ...++.++.+|+.++.
T Consensus 201 ~l~~~~~~~~~~~-~~~vLDl~cG~G~~~l~la~~~~--~V~gvd~~~~ai~~a~~n~~~n---g~~~v~~~~~d~~~~~ 274 (369)
T 3bt7_A 201 QMLEWALDVTKGS-KGDLLELYCGNGNFSLALARNFD--RVLATEIAKPSVAAAQYNIAAN---HIDNVQIIRMAAEEFT 274 (369)
T ss_dssp HHHHHHHHHTTTC-CSEEEEESCTTSHHHHHHGGGSS--EEEEECCCHHHHHHHHHHHHHT---TCCSEEEECCCSHHHH
T ss_pred HHHHHHHHHhhcC-CCEEEEccCCCCHHHHHHHhcCC--EEEEEECCHHHHHHHHHHHHHc---CCCceEEEECCHHHHH
Confidence 3345566666543 57899999999999999888654 9999999999999999998876 1358999999986642
Q ss_pred --CCC--------------CcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEE
Q 018003 244 --FAS--------------SSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 286 (362)
Q Consensus 244 --~~~--------------~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~ 286 (362)
+.. .+||+|++.-- ...+..++.+.|+++|.++...-
T Consensus 275 ~~~~~~~~~~~l~~~~~~~~~fD~Vv~dPP------r~g~~~~~~~~l~~~g~ivyvsc 327 (369)
T 3bt7_A 275 QAMNGVREFNRLQGIDLKSYQCETIFVDPP------RSGLDSETEKMVQAYPRILYISC 327 (369)
T ss_dssp HHHSSCCCCTTGGGSCGGGCCEEEEEECCC------TTCCCHHHHHHHTTSSEEEEEES
T ss_pred HHHhhccccccccccccccCCCCEEEECcC------ccccHHHHHHHHhCCCEEEEEEC
Confidence 121 37999986321 11245677888889999887654
No 266
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.86 E-value=2.8e-08 Score=97.91 Aligned_cols=131 Identities=18% Similarity=0.098 Sum_probs=101.2
Q ss_pred cCCCCCcHHHHHHHHhhcC----CCCCCeEEEEcCccchHHHHHHHhC---CCCEEEEEeCCHHHHHHHHHHHhhcCCCC
Q 018003 156 WGGFPGPEKEFELMKGYLK----PVLGGNIIDASCGSGLFSRIFAKSG---LFSLVVALDYSENMLKQCYEFVQQESNFP 228 (362)
Q Consensus 156 ~~~~~~~~~~~~~l~~~l~----~~~~~~vLDiGcG~G~~~~~l~~~~---~~~~v~gvD~s~~~~~~a~~~~~~~~~~~ 228 (362)
.+.+++|....+.+.+.+. +.++.+|||.+||+|.++..+.+.. ....++|+|+++.+++.|+.++... +..
T Consensus 196 ~G~fyTP~~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~-gi~ 274 (542)
T 3lkd_A 196 AGEFYTPQPVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILH-GVP 274 (542)
T ss_dssp CSSCCCCHHHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHT-TCC
T ss_pred CCeecccHHHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHc-CCC
Confidence 4678899999888888876 4568899999999999988887762 2458999999999999999887665 222
Q ss_pred CCCEEEEEecCCCC--C-CCCCcceEEEeccccc--C-----------------CC---C-HHHHHHHHHhhcc-CCcEE
Q 018003 229 KENFLLVRADISRL--P-FASSSIDAVHAGAAIH--C-----------------WS---S-PSTGVAEISRVLR-PGGVF 281 (362)
Q Consensus 229 ~~~~~~~~~d~~~~--p-~~~~~fD~V~~~~vl~--h-----------------~~---d-~~~~l~~i~r~Lk-pgG~l 281 (362)
..++.+.++|.... | .....||+|+++--.. . ++ + -..++..+.+.|| |||++
T Consensus 275 ~~~~~I~~gDtL~~d~p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~ 354 (542)
T 3lkd_A 275 IENQFLHNADTLDEDWPTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVM 354 (542)
T ss_dssp GGGEEEEESCTTTSCSCCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEE
T ss_pred cCccceEecceecccccccccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeE
Confidence 25688999998765 4 3467899999872211 0 10 0 1258999999999 99999
Q ss_pred EEEEEc
Q 018003 282 VGTTYI 287 (362)
Q Consensus 282 i~~~~~ 287 (362)
.+.+|.
T Consensus 355 a~VlP~ 360 (542)
T 3lkd_A 355 AIVLPH 360 (542)
T ss_dssp EEEEET
T ss_pred EEEecc
Confidence 999886
No 267
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.84 E-value=1.4e-08 Score=103.33 Aligned_cols=127 Identities=14% Similarity=0.030 Sum_probs=91.1
Q ss_pred CCcHHHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhC----------------------------------------
Q 018003 160 PGPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSG---------------------------------------- 199 (362)
Q Consensus 160 ~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~---------------------------------------- 199 (362)
+-.+.....+.......++..|||.+||+|.++..++..+
T Consensus 173 pl~e~LAa~ll~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~ 252 (703)
T 3v97_A 173 PIKETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGL 252 (703)
T ss_dssp SSCHHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhcc
Confidence 3345666777777777778899999999999988777542
Q ss_pred --CCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCC--CCCCCcceEEEecccc-cCCC---CHHHHH---
Q 018003 200 --LFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL--PFASSSIDAVHAGAAI-HCWS---SPSTGV--- 268 (362)
Q Consensus 200 --~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~--p~~~~~fD~V~~~~vl-~h~~---d~~~~l--- 268 (362)
+...++|+|+++.+++.|++++... +....+.+.++|+.++ |...++||+|+++--. +.+. +...+.
T Consensus 253 ~~~~~~i~G~Did~~av~~A~~N~~~a--gv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l 330 (703)
T 3v97_A 253 AEYSSHFYGSDSDARVIQRARTNARLA--GIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLL 330 (703)
T ss_dssp HHCCCCEEEEESCHHHHHHHHHHHHHT--TCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHH
T ss_pred ccCCccEEEEECCHHHHHHHHHHHHHc--CCCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHH
Confidence 1247999999999999999998876 2234599999999876 3334489999998432 1222 223334
Q ss_pred HHHHhhccCCcEEEEEEEcc
Q 018003 269 AEISRVLRPGGVFVGTTYIV 288 (362)
Q Consensus 269 ~~i~r~LkpgG~li~~~~~~ 288 (362)
.++.+.+.|||.+++.+++.
T Consensus 331 ~~~lk~~~~g~~~~ilt~~~ 350 (703)
T 3v97_A 331 GRIMKNQFGGWNLSLFSASP 350 (703)
T ss_dssp HHHHHHHCTTCEEEEEESCH
T ss_pred HHHHHhhCCCCeEEEEeCCH
Confidence 44445556899999988754
No 268
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.83 E-value=7.3e-09 Score=97.94 Aligned_cols=104 Identities=14% Similarity=0.109 Sum_probs=82.2
Q ss_pred CCCCeEEEEcCccchHHHHHHHhCCC-CEEEEEeCCHHHHHHHHHHHhhcCCCCCCC-EEEEEecCCCCC--CCCCcceE
Q 018003 176 VLGGNIIDASCGSGLFSRIFAKSGLF-SLVVALDYSENMLKQCYEFVQQESNFPKEN-FLLVRADISRLP--FASSSIDA 251 (362)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~-~~~~~~d~~~~p--~~~~~fD~ 251 (362)
.++.+|||++||+|.++..++.+..+ .+|+++|+++.+++.++++++.+ +...+ +.++.+|+..+. ...+.||+
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~N--gl~~~~v~v~~~Da~~~l~~~~~~~fD~ 128 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLN--NIPEDRYEIHGMEANFFLRKEWGFGFDY 128 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHT--TCCGGGEEEECSCHHHHHHSCCSSCEEE
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHh--CCCCceEEEEeCCHHHHHHHhhCCCCcE
Confidence 35789999999999999998886322 48999999999999999999886 22234 999999985432 12457999
Q ss_pred EEecccccCCCCHHHHHHHHHhhccCCcEEEEEE
Q 018003 252 VHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 285 (362)
Q Consensus 252 V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~ 285 (362)
|++.- ...+..+++.+.++|+|||+++++.
T Consensus 129 V~lDP----~g~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 129 VDLDP----FGTPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp EEECC----SSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEECC----CcCHHHHHHHHHHHhCCCCEEEEEe
Confidence 99865 2334678999999999999888776
No 269
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.82 E-value=9.9e-09 Score=92.85 Aligned_cols=77 Identities=14% Similarity=0.189 Sum_probs=64.4
Q ss_pred HHHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCC--CEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCC
Q 018003 163 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLF--SLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADIS 240 (362)
Q Consensus 163 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~ 240 (362)
....+.+.+.+...++.+|||||||+|.++..+++.+.. .+|+|+|+++.|++.++++. . .++.++++|+.
T Consensus 28 ~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~--~-----~~v~~i~~D~~ 100 (279)
T 3uzu_A 28 HGVIDAIVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF--G-----ELLELHAGDAL 100 (279)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH--G-----GGEEEEESCGG
T ss_pred HHHHHHHHHhcCCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc--C-----CCcEEEECChh
Confidence 445677888888788899999999999999999998651 23999999999999999873 2 57999999999
Q ss_pred CCCCCC
Q 018003 241 RLPFAS 246 (362)
Q Consensus 241 ~~p~~~ 246 (362)
.+++++
T Consensus 101 ~~~~~~ 106 (279)
T 3uzu_A 101 TFDFGS 106 (279)
T ss_dssp GCCGGG
T ss_pred cCChhH
Confidence 887653
No 270
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.82 E-value=6.9e-09 Score=97.97 Aligned_cols=105 Identities=17% Similarity=0.107 Sum_probs=81.8
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCC------------CCCCEEEEEecCCCCCC
Q 018003 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNF------------PKENFLLVRADISRLPF 244 (362)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~------------~~~~~~~~~~d~~~~p~ 244 (362)
++.+|||+|||+|.++..++...+..+|+++|+++.+++.++++++.+... ...++.++++|+..+..
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~ 126 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMA 126 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHH
Confidence 477999999999999999998854568999999999999999998775100 12348999999866431
Q ss_pred -CCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEE
Q 018003 245 -ASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 285 (362)
Q Consensus 245 -~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~ 285 (362)
..+.||+|++.- ...+..++..+.+.|||||+++++.
T Consensus 127 ~~~~~fD~I~lDP----~~~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 127 ERHRYFHFIDLDP----FGSPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HSTTCEEEEEECC----SSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred hccCCCCEEEeCC----CCCHHHHHHHHHHhcCCCCEEEEEe
Confidence 135799999532 1245788999999999999887765
No 271
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.80 E-value=1e-08 Score=101.21 Aligned_cols=129 Identities=18% Similarity=0.049 Sum_probs=97.2
Q ss_pred cCCCCCcHHHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhC---------------CCCEEEEEeCCHHHHHHHHHH
Q 018003 156 WGGFPGPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSG---------------LFSLVVALDYSENMLKQCYEF 220 (362)
Q Consensus 156 ~~~~~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~---------------~~~~v~gvD~s~~~~~~a~~~ 220 (362)
.+.+++|....+.+.+.+.+.++ +|||.+||+|.++..+.+.. ....++|+|+++.+++.|+.+
T Consensus 224 ~G~fyTP~~Vv~lmv~ll~p~~~-~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~N 302 (544)
T 3khk_A 224 GGQYYTPKSIVTLIVEMLEPYKG-RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMN 302 (544)
T ss_dssp STTTCCCHHHHHHHHHHHCCCSE-EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHH
T ss_pred CCeEeCCHHHHHHHHHHHhcCCC-eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHH
Confidence 46788999999999999987665 99999999999987765421 034899999999999999998
Q ss_pred HhhcCCCCCCCEEEEEecCCCCC-CCCCcceEEEecccccC-------------------------CCC----HHHHHHH
Q 018003 221 VQQESNFPKENFLLVRADISRLP-FASSSIDAVHAGAAIHC-------------------------WSS----PSTGVAE 270 (362)
Q Consensus 221 ~~~~~~~~~~~~~~~~~d~~~~p-~~~~~fD~V~~~~vl~h-------------------------~~d----~~~~l~~ 270 (362)
+... + ...++.+.++|....+ +....||+|+++--... ++. ...++..
T Consensus 303 l~l~-g-i~~~i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~ 380 (544)
T 3khk_A 303 MVIR-G-IDFNFGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLH 380 (544)
T ss_dssp HHHT-T-CCCBCCSSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHH
T ss_pred HHHh-C-CCcccceeccchhcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHH
Confidence 7665 1 1223444778875544 45678999999743321 110 1268999
Q ss_pred HHhhccCCcEEEEEEEc
Q 018003 271 ISRVLRPGGVFVGTTYI 287 (362)
Q Consensus 271 i~r~LkpgG~li~~~~~ 287 (362)
+.+.|||||++.+.+|.
T Consensus 381 ~l~~Lk~gGr~aiVlP~ 397 (544)
T 3khk_A 381 MLYHLAPTGSMALLLAN 397 (544)
T ss_dssp HHHTEEEEEEEEEEEET
T ss_pred HHHHhccCceEEEEecc
Confidence 99999999999999886
No 272
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.79 E-value=1.2e-08 Score=95.13 Aligned_cols=159 Identities=10% Similarity=0.056 Sum_probs=103.2
Q ss_pred CCeEEEEcCccchHHHHHHHh----------------CCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEe---c
Q 018003 178 GGNIIDASCGSGLFSRIFAKS----------------GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRA---D 238 (362)
Q Consensus 178 ~~~vLDiGcG~G~~~~~l~~~----------------~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~---d 238 (362)
..+|+|+||++|.++..+... .|..+|+..|+..+.....-+.+.... ...+..++.+ .
T Consensus 52 ~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~--~~~~~~f~~gvpgS 129 (359)
T 1m6e_X 52 RLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIEN--DVDGVCFINGVPGS 129 (359)
T ss_dssp EECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSC--SCTTCEEEEEEESC
T ss_pred ceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhc--ccCCCEEEEecchh
Confidence 467999999999876554432 244689999998888777776554310 0012344444 4
Q ss_pred CCCCCCCCCcceEEEecccccCCCCHH---------------------------------HHHHHHHhhccCCcEEEEEE
Q 018003 239 ISRLPFASSSIDAVHAGAAIHCWSSPS---------------------------------TGVAEISRVLRPGGVFVGTT 285 (362)
Q Consensus 239 ~~~~p~~~~~fD~V~~~~vl~h~~d~~---------------------------------~~l~~i~r~LkpgG~li~~~ 285 (362)
+..-.|+++++|+|+++.+||++.+.. .+|+..++.|+|||+++++.
T Consensus 130 Fy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~ 209 (359)
T 1m6e_X 130 FYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTI 209 (359)
T ss_dssp SSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEE
T ss_pred hhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEE
Confidence 444678899999999999999986422 34888899999999999999
Q ss_pred EccCCCCc-------chhhhHHHHH-hhhhc------ccccccccccCCHHHHHHHHHHCCC-EEEEE
Q 018003 286 YIVDGPFN-------LIPFSRLLRQ-VCFLD------LKIVGFSIPVLGFDDLKRIFRQFQL-VVNLK 338 (362)
Q Consensus 286 ~~~~~~~~-------~~~~~~~~~~-~~~~~------~~~~~~~~~~~s~~~l~~ll~~~Gf-~~v~~ 338 (362)
.......+ ....+..... ..... .........+.+.++++.++++.|. ++...
T Consensus 210 ~gr~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~ek~d~f~~P~y~ps~~E~~~~ie~~G~F~i~~~ 277 (359)
T 1m6e_X 210 LGRRSEDRASTECCLIWQLLAMALNQMVSEGLIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLIDHI 277 (359)
T ss_dssp EECSSSSSSSTTTSTTTHHHHHHHHHHHHTTCSCCSTTGGGCCCCBCCCSHHHHHHHHHTTTBCCEEE
T ss_pred ecCCCCCccccchHHHHHHHHHHHHHHHHccccchhhhhccCCCccCCCHHHHHHHHHHcCCceEEEE
Confidence 87754321 1111221111 11100 0111114677899999999999966 44443
No 273
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.78 E-value=4e-08 Score=87.41 Aligned_cols=76 Identities=16% Similarity=0.369 Sum_probs=64.6
Q ss_pred HHHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCC
Q 018003 163 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL 242 (362)
Q Consensus 163 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~ 242 (362)
....+.+.+.+...++.+|||||||+|.++..+++.+ ..+++|+|+++.+++.++++ . ..++.++++|+..+
T Consensus 17 ~~i~~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~~-~~~v~avEid~~~~~~~~~~--~-----~~~v~~i~~D~~~~ 88 (249)
T 3ftd_A 17 EGVLKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQHP-LKKLYVIELDREMVENLKSI--G-----DERLEVINEDASKF 88 (249)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTSC-CSEEEEECCCHHHHHHHTTS--C-----CTTEEEECSCTTTC
T ss_pred HHHHHHHHHhcCCCCcCEEEEEcCchHHHHHHHHHcC-CCeEEEEECCHHHHHHHHhc--c-----CCCeEEEEcchhhC
Confidence 4456778888887788999999999999999999884 35999999999999999875 1 35899999999998
Q ss_pred CCCC
Q 018003 243 PFAS 246 (362)
Q Consensus 243 p~~~ 246 (362)
++++
T Consensus 89 ~~~~ 92 (249)
T 3ftd_A 89 PFCS 92 (249)
T ss_dssp CGGG
T ss_pred ChhH
Confidence 8764
No 274
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.76 E-value=6.6e-09 Score=93.02 Aligned_cols=87 Identities=16% Similarity=0.130 Sum_probs=65.5
Q ss_pred HhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCH-------HHHHHHHHHHhhcCCCCCCCEEEEEecCCCC
Q 018003 170 KGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSE-------NMLKQCYEFVQQESNFPKENFLLVRADISRL 242 (362)
Q Consensus 170 ~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~-------~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~ 242 (362)
...+...++.+|||+|||+|.++..++..+. +|+|+|+++ .+++.|+++++.. +...++.++++|+..+
T Consensus 76 ~~a~~~~~~~~VLDlgcG~G~~a~~lA~~g~--~V~~vD~s~~~~~ll~~~l~~a~~n~~~~--~~~~ri~~~~~d~~~~ 151 (258)
T 2r6z_A 76 AKAVNHTAHPTVWDATAGLGRDSFVLASLGL--TVTAFEQHPAVACLLSDGIRRALLNPETQ--DTAARINLHFGNAAEQ 151 (258)
T ss_dssp HHHTTGGGCCCEEETTCTTCHHHHHHHHTTC--CEEEEECCHHHHHHHHHHHHHHHHSHHHH--HHHTTEEEEESCHHHH
T ss_pred HHHhCcCCcCeEEEeeCccCHHHHHHHHhCC--EEEEEECChhhhHHHHHHHHHHHhHHHhh--CCccCeEEEECCHHHH
Confidence 3333444578999999999999999999764 999999999 9999998766543 0123599999998764
Q ss_pred -C-CCC--CcceEEEecccccC
Q 018003 243 -P-FAS--SSIDAVHAGAAIHC 260 (362)
Q Consensus 243 -p-~~~--~~fD~V~~~~vl~h 260 (362)
+ +++ ++||+|++.-.+.|
T Consensus 152 l~~~~~~~~~fD~V~~dP~~~~ 173 (258)
T 2r6z_A 152 MPALVKTQGKPDIVYLDPMYPE 173 (258)
T ss_dssp HHHHHHHHCCCSEEEECCCC--
T ss_pred HHhhhccCCCccEEEECCCCCC
Confidence 3 344 68999999776655
No 275
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.72 E-value=8.5e-09 Score=91.95 Aligned_cols=87 Identities=7% Similarity=0.112 Sum_probs=65.8
Q ss_pred HHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC
Q 018003 164 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP 243 (362)
Q Consensus 164 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p 243 (362)
...+.+.+.+...++.+|||||||+|.++. +.+ +...+|+|+|+++.|++.+++++... .++.++++|+..++
T Consensus 8 ~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~-l~~-~~~~~v~avEid~~~~~~a~~~~~~~-----~~v~~i~~D~~~~~ 80 (252)
T 1qyr_A 8 FVIDSIVSAINPQKGQAMVEIGPGLAALTE-PVG-ERLDQLTVIELDRDLAARLQTHPFLG-----PKLTIYQQDAMTFN 80 (252)
T ss_dssp HHHHHHHHHHCCCTTCCEEEECCTTTTTHH-HHH-TTCSCEEEECCCHHHHHHHHTCTTTG-----GGEEEECSCGGGCC
T ss_pred HHHHHHHHhcCCCCcCEEEEECCCCcHHHH-hhh-CCCCeEEEEECCHHHHHHHHHHhccC-----CceEEEECchhhCC
Confidence 345667777777778899999999999999 654 54122999999999999999875432 58999999998887
Q ss_pred CCC-----CcceEEEeccc
Q 018003 244 FAS-----SSIDAVHAGAA 257 (362)
Q Consensus 244 ~~~-----~~fD~V~~~~v 257 (362)
+++ +..|.|+++--
T Consensus 81 ~~~~~~~~~~~~~vvsNlP 99 (252)
T 1qyr_A 81 FGELAEKMGQPLRVFGNLP 99 (252)
T ss_dssp HHHHHHHHTSCEEEEEECC
T ss_pred HHHhhcccCCceEEEECCC
Confidence 543 13466766543
No 276
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.70 E-value=5.7e-08 Score=96.69 Aligned_cols=100 Identities=14% Similarity=0.054 Sum_probs=74.1
Q ss_pred CCeEEEEcCccchHHHHHHHhC----CCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCCCCcceEEE
Q 018003 178 GGNIIDASCGSGLFSRIFAKSG----LFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVH 253 (362)
Q Consensus 178 ~~~vLDiGcG~G~~~~~l~~~~----~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~~~~fD~V~ 253 (362)
+..|||+|||+|.+.....+.+ ...+|+++|.++ ++..+++....+ +...+|+++.+|++++..+ +++|+|+
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N--~~~dkVtVI~gd~eev~LP-EKVDIIV 433 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFE--EWGSQVTVVSSDMREWVAP-EKADIIV 433 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHH--TTGGGEEEEESCTTTCCCS-SCEEEEE
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhc--cCCCeEEEEeCcceeccCC-cccCEEE
Confidence 4579999999999855444432 223689999997 677787777665 4567899999999998765 5799999
Q ss_pred eccc---ccCCCCHHHHHHHHHhhccCCcEEE
Q 018003 254 AGAA---IHCWSSPSTGVAEISRVLRPGGVFV 282 (362)
Q Consensus 254 ~~~v---l~h~~d~~~~l~~i~r~LkpgG~li 282 (362)
+-.. +-+-..| ..|....|.|||||+++
T Consensus 434 SEwMG~fLl~E~ml-evL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 434 SELLGSFADNELSP-ECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp CCCCBTTBGGGCHH-HHHHHHGGGEEEEEEEE
T ss_pred EEcCcccccccCCH-HHHHHHHHhcCCCcEEc
Confidence 8433 1111234 67888889999999876
No 277
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.70 E-value=3.5e-08 Score=88.12 Aligned_cols=133 Identities=14% Similarity=0.102 Sum_probs=87.5
Q ss_pred CCCCeEEEEcCccchHHHHHHHh-------CCC-----CEEEEEeCCH---HHHH-----------HHHHHHhhcC----
Q 018003 176 VLGGNIIDASCGSGLFSRIFAKS-------GLF-----SLVVALDYSE---NMLK-----------QCYEFVQQES---- 225 (362)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~-------~~~-----~~v~gvD~s~---~~~~-----------~a~~~~~~~~---- 225 (362)
.++.+|||+|+|+|..+..+.+. .+. .+++++|..+ +++. .|++.++...
T Consensus 59 ~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~ 138 (257)
T 2qy6_A 59 HPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLP 138 (257)
T ss_dssp SSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCS
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhcccccc
Confidence 34579999999999988776543 453 4899999876 4443 5555554310
Q ss_pred -------CCCCCCEEEEEecCCC-CCCCC----CcceEEEecc-cccCCCC--HHHHHHHHHhhccCCcEEEEEEEccCC
Q 018003 226 -------NFPKENFLLVRADISR-LPFAS----SSIDAVHAGA-AIHCWSS--PSTGVAEISRVLRPGGVFVGTTYIVDG 290 (362)
Q Consensus 226 -------~~~~~~~~~~~~d~~~-~p~~~----~~fD~V~~~~-vl~h~~d--~~~~l~~i~r~LkpgG~li~~~~~~~~ 290 (362)
..+..++.++.+|+.+ ++..+ +.||+|+... .-..-++ -..+++++.++|||||+|+. +..
T Consensus 139 g~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~t--ysa-- 214 (257)
T 2qy6_A 139 GCHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLAT--FTS-- 214 (257)
T ss_dssp EEEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEE--SCC--
T ss_pred chhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEE--EeC--
Confidence 0113567899999865 44222 2799999843 2111112 24789999999999999883 211
Q ss_pred CCcchhhhHHHHHhhhhcccccccccccCCHHHHHHHHHHCCCEEEEEEEec
Q 018003 291 PFNLIPFSRLLRQVCFLDLKIVGFSIPVLGFDDLKRIFRQFQLVVNLKLFYG 342 (362)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~~Gf~~v~~~~~g 342 (362)
...+++.|.++||++.+...++
T Consensus 215 ------------------------------a~~vrr~L~~aGF~v~~~~g~~ 236 (257)
T 2qy6_A 215 ------------------------------AGFVRRGLQEAGFTMQKRKGFG 236 (257)
T ss_dssp ------------------------------BHHHHHHHHHHTEEEEEECCST
T ss_pred ------------------------------CHHHHHHHHHCCCEEEeCCCCC
Confidence 1247788899999987655444
No 278
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.66 E-value=4.1e-08 Score=87.10 Aligned_cols=115 Identities=16% Similarity=0.117 Sum_probs=76.7
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCCC
Q 018003 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 246 (362)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~~ 246 (362)
..+.+.....++.+|||+|||+|.++..+++..+...+.|+|+..++....... .. ...++..+..+++...+..
T Consensus 64 ~ei~ek~~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~~-~~----~g~~ii~~~~~~dv~~l~~ 138 (277)
T 3evf_A 64 RWFHERGYVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMNV-QS----LGWNIITFKDKTDIHRLEP 138 (277)
T ss_dssp HHHHHTTSSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCCC-CB----TTGGGEEEECSCCTTTSCC
T ss_pred HHHHHhCCCCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCccccccc-Cc----CCCCeEEEeccceehhcCC
Confidence 334444445678899999999999999888764444788888875431000000 00 0114556677766666778
Q ss_pred CcceEEEecccccCCCCHH-------HHHHHHHhhccCC-cEEEEEEEc
Q 018003 247 SSIDAVHAGAAIHCWSSPS-------TGVAEISRVLRPG-GVFVGTTYI 287 (362)
Q Consensus 247 ~~fD~V~~~~vl~h~~d~~-------~~l~~i~r~Lkpg-G~li~~~~~ 287 (362)
+.||+|++..+.+ ..... .+|+.+.++|||| |.|++..+.
T Consensus 139 ~~~DlVlsD~apn-sG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~ 186 (277)
T 3evf_A 139 VKCDTLLCDIGES-SSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLA 186 (277)
T ss_dssp CCCSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred CCccEEEecCccC-cCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecC
Confidence 8999999977554 32221 3468889999999 999998765
No 279
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.63 E-value=3.4e-07 Score=82.70 Aligned_cols=110 Identities=16% Similarity=0.292 Sum_probs=85.1
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcC--CCCCCCEEEEEecCCCC-CCCCCcceEEE
Q 018003 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES--NFPKENFLLVRADISRL-PFASSSIDAVH 253 (362)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~--~~~~~~~~~~~~d~~~~-p~~~~~fD~V~ 253 (362)
..++||-||.|.|..++.+.+..+..+++.+|+++..++.|++.+.... ....++++++.+|.... .-..++||+|+
T Consensus 83 ~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvIi 162 (294)
T 3o4f_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVII 162 (294)
T ss_dssp CCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEEE
T ss_pred CCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEEE
Confidence 3679999999999999999987666799999999999999999874320 11257999999998764 34467899999
Q ss_pred ecccc-----cCCCCHHHHHHHHHhhccCCcEEEEEEEc
Q 018003 254 AGAAI-----HCWSSPSTGVAEISRVLRPGGVFVGTTYI 287 (362)
Q Consensus 254 ~~~vl-----~h~~d~~~~l~~i~r~LkpgG~li~~~~~ 287 (362)
.-..= .++ --..+++.+++.|+|||+++.....
T Consensus 163 ~D~~dp~~~~~~L-~t~eFy~~~~~~L~p~Gv~v~q~~s 200 (294)
T 3o4f_A 163 SDCTDPIGPGESL-FTSAFYEGCKRCLNPGGIFVAQNGV 200 (294)
T ss_dssp ESCCCCCCTTCCS-SCCHHHHHHHHTEEEEEEEEEEEEE
T ss_pred EeCCCcCCCchhh-cCHHHHHHHHHHhCCCCEEEEecCC
Confidence 75321 111 0137899999999999999986544
No 280
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.62 E-value=6.4e-07 Score=76.58 Aligned_cols=98 Identities=11% Similarity=0.025 Sum_probs=73.9
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCC--CCCEEEEEecCCCC------------
Q 018003 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFP--KENFLLVRADISRL------------ 242 (362)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~--~~~~~~~~~d~~~~------------ 242 (362)
+..+|||+||| .-+..+++. ++++|+.+|.+++..+.|++.+++. +. ..++.++.+|+...
T Consensus 30 ~a~~VLEiGtG--ySTl~lA~~-~~g~VvtvE~d~~~~~~ar~~l~~~--g~~~~~~I~~~~gda~~~~~wg~p~~~~~~ 104 (202)
T 3cvo_A 30 EAEVILEYGSG--GSTVVAAEL-PGKHVTSVESDRAWARMMKAWLAAN--PPAEGTEVNIVWTDIGPTGDWGHPVSDAKW 104 (202)
T ss_dssp HCSEEEEESCS--HHHHHHHTS-TTCEEEEEESCHHHHHHHHHHHHHS--CCCTTCEEEEEECCCSSBCGGGCBSSSTTG
T ss_pred CCCEEEEECch--HHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHHc--CCCCCCceEEEEeCchhhhcccccccchhh
Confidence 36799999985 566666664 3579999999999999999999886 22 45899999996532
Q ss_pred ---C--------C-CCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEE
Q 018003 243 ---P--------F-ASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGT 284 (362)
Q Consensus 243 ---p--------~-~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~ 284 (362)
+ . ..++||+|+.-.- .....+..+.+.|+|||++++-
T Consensus 105 ~~l~~~~~~i~~~~~~~~fDlIfIDg~-----k~~~~~~~~l~~l~~GG~Iv~D 153 (202)
T 3cvo_A 105 RSYPDYPLAVWRTEGFRHPDVVLVDGR-----FRVGCALATAFSITRPVTLLFD 153 (202)
T ss_dssp GGTTHHHHGGGGCTTCCCCSEEEECSS-----SHHHHHHHHHHHCSSCEEEEET
T ss_pred hhHHHHhhhhhccccCCCCCEEEEeCC-----CchhHHHHHHHhcCCCeEEEEe
Confidence 1 1 2368999998663 2246677788999999999654
No 281
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.59 E-value=4.3e-08 Score=87.49 Aligned_cols=109 Identities=16% Similarity=0.075 Sum_probs=73.3
Q ss_pred HHHhhcCCCCC--CeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcC---CC---CCCCEEEEEecC
Q 018003 168 LMKGYLKPVLG--GNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES---NF---PKENFLLVRADI 239 (362)
Q Consensus 168 ~l~~~l~~~~~--~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~---~~---~~~~~~~~~~d~ 239 (362)
.+.+.+...++ .+|||+|||+|..+..++..+. +|+++|.++.+.+.+++.++... .. ...+++++++|.
T Consensus 77 ~l~~al~l~~g~~~~VLDl~~G~G~dal~lA~~g~--~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~ 154 (258)
T 2oyr_A 77 AVAKAVGIKGDYLPDVVDATAGLGRDAFVLASVGC--RVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASS 154 (258)
T ss_dssp HHHHHTTCBTTBCCCEEETTCTTCHHHHHHHHHTC--CEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCH
T ss_pred HHHHHhcccCCCCCEEEEcCCcCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCH
Confidence 45555655556 8999999999999999999865 89999999988777666543210 00 014699999998
Q ss_pred CC-CCCCCCcceEEEecccccCCCCHHHHHHHHHhhccCCc
Q 018003 240 SR-LPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGG 279 (362)
Q Consensus 240 ~~-~p~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG 279 (362)
.. ++...+.||+|++.-...+ .....++++..++|++.+
T Consensus 155 ~~~L~~~~~~fDvV~lDP~y~~-~~~saavkk~~~~lr~l~ 194 (258)
T 2oyr_A 155 LTALTDITPRPQVVYLDPMFPH-KQKSALVKKEMRVFQSLV 194 (258)
T ss_dssp HHHSTTCSSCCSEEEECCCCCC-CCC-----HHHHHHHHHS
T ss_pred HHHHHhCcccCCEEEEcCCCCC-cccchHHHHHHHHHHHhh
Confidence 65 3322246999999877765 333355666666776644
No 282
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.56 E-value=6e-07 Score=90.73 Aligned_cols=133 Identities=13% Similarity=0.015 Sum_probs=90.9
Q ss_pred ccCCCCCcHHHHHHHHhh----cCC--CCCCeEEEEcCccchHHHHHHHhCC---CCEEEEEeCCHHHHHHHHHHHhhcC
Q 018003 155 VWGGFPGPEKEFELMKGY----LKP--VLGGNIIDASCGSGLFSRIFAKSGL---FSLVVALDYSENMLKQCYEFVQQES 225 (362)
Q Consensus 155 ~~~~~~~~~~~~~~l~~~----l~~--~~~~~vLDiGcG~G~~~~~l~~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~ 225 (362)
..+.++.|......+... +.. .++.+|||.|||+|.++..+++... ..+++|+|+++.+++.|+.++....
T Consensus 293 k~GqFYTP~eLA~lMVeLA~ill~~~l~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~l 372 (878)
T 3s1s_A 293 HEGVVPTDIELGKVLSIISQHILGRPLTEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLF 372 (878)
T ss_dssp CCBSSSCCHHHHHHHHHHHHHHHCSCCCTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTS
T ss_pred cCceEcCCHHHHHHHHHHHhhhccccCCCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHH
Confidence 346678888887777766 332 3578999999999999999887653 2479999999999999943322110
Q ss_pred C---CCCCCEEEEEecCCCC-CCCCCcceEEEecccccC-CC---------------------------C-HHHHHHHHH
Q 018003 226 N---FPKENFLLVRADISRL-PFASSSIDAVHAGAAIHC-WS---------------------------S-PSTGVAEIS 272 (362)
Q Consensus 226 ~---~~~~~~~~~~~d~~~~-p~~~~~fD~V~~~~vl~h-~~---------------------------d-~~~~l~~i~ 272 (362)
+ .......+...|+... +...+.||+|+++--.-. .. + ...+++.+.
T Consensus 373 N~LlhGi~~~~I~~dD~L~~~~~~~~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al 452 (878)
T 3s1s_A 373 PQLVSSNNAPTITGEDVCSLNPEDFANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVT 452 (878)
T ss_dssp TTTCBTTBCCEEECCCGGGCCGGGGTTEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHH
T ss_pred hhhhcCCCcceEEecchhcccccccCCCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHH
Confidence 0 0112234555566543 234578999999744311 11 1 224688899
Q ss_pred hhccCCcEEEEEEEc
Q 018003 273 RVLRPGGVFVGTTYI 287 (362)
Q Consensus 273 r~LkpgG~li~~~~~ 287 (362)
+.|+|||++.+.+|.
T Consensus 453 ~lLKpGGrLAfIlP~ 467 (878)
T 3s1s_A 453 ELVQDGTVISAIMPK 467 (878)
T ss_dssp HHSCTTCEEEEEEET
T ss_pred HhcCCCcEEEEEECh
Confidence 999999999999986
No 283
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.54 E-value=2.2e-07 Score=92.43 Aligned_cols=101 Identities=13% Similarity=0.114 Sum_probs=72.3
Q ss_pred CCeEEEEcCccchHHHHHHH----hC---------CCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCC
Q 018003 178 GGNIIDASCGSGLFSRIFAK----SG---------LFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF 244 (362)
Q Consensus 178 ~~~vLDiGcG~G~~~~~l~~----~~---------~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~ 244 (362)
+..|||||||+|.++....+ .+ ...+|+++|.++.+....+.+... +...++.++.+|++++..
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~N---g~~d~VtVI~gd~eev~l 486 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNVR---TWKRRVTIIESDMRSLPG 486 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHHH---TTTTCSEEEESCGGGHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHhc---CCCCeEEEEeCchhhccc
Confidence 45899999999999643222 22 224899999999777655554432 235679999999998866
Q ss_pred C-----CCcceEEEecccccCCCC---HHHHHHHHHhhccCCcEEE
Q 018003 245 A-----SSSIDAVHAGAAIHCWSS---PSTGVAEISRVLRPGGVFV 282 (362)
Q Consensus 245 ~-----~~~fD~V~~~~vl~h~~d---~~~~l~~i~r~LkpgG~li 282 (362)
+ .+++|+|++-.. ..+.+ -...|..+.+.|||||+++
T Consensus 487 p~~~~~~ekVDIIVSElm-Gsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 487 IAKDRGFEQPDIIVSELL-GSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HHHHTTCCCCSEEEECCC-BTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred ccccCCCCcccEEEEecc-ccccchhccHHHHHHHHHhCCCCcEEE
Confidence 3 578999998554 22222 2357888889999999876
No 284
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.50 E-value=1.9e-07 Score=88.50 Aligned_cols=76 Identities=11% Similarity=0.125 Sum_probs=62.3
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCC-CC-CCCcceEEEe
Q 018003 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-PF-ASSSIDAVHA 254 (362)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~-p~-~~~~fD~V~~ 254 (362)
++.+|||+|||+|..+..+++.+. +|+|+|+|+.+++.|+++++...++ ..++.++++|+.+. +. .+++||+|++
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~g~--~V~~VD~s~~~l~~Ar~N~~~~~~g-l~~i~~i~~Da~~~L~~~~~~~fDvV~l 169 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSKAS--QGIYIERNDETAVAARHNIPLLLNE-GKDVNILTGDFKEYLPLIKTFHPDYIYV 169 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTTCS--EEEEEESCHHHHHHHHHHHHHHSCT-TCEEEEEESCGGGSHHHHHHHCCSEEEE
T ss_pred CCCEEEEeCCCchHHHHHHHhcCC--EEEEEECCHHHHHHHHHhHHHhccC-CCcEEEEECcHHHhhhhccCCCceEEEE
Confidence 378999999999999999988765 9999999999999999998754101 26799999999874 32 2357999998
Q ss_pred c
Q 018003 255 G 255 (362)
Q Consensus 255 ~ 255 (362)
.
T Consensus 170 D 170 (410)
T 3ll7_A 170 D 170 (410)
T ss_dssp C
T ss_pred C
Confidence 5
No 285
>2jny_A Uncharacterized BCR; structure, CGR1, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Corynebacterium glutamicum} SCOP: b.171.1.1
Probab=98.43 E-value=1.2e-07 Score=65.39 Aligned_cols=48 Identities=19% Similarity=0.169 Sum_probs=40.8
Q ss_pred cccCCeeeCCCCCCCcccccCCCCccccccCCceecCccCcccccCCceeeeecCCC
Q 018003 66 STSKNVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSGVGTHFDMTAASG 122 (362)
Q Consensus 66 ~~~~~~l~CP~C~~~l~~~~~~~~~~~~~~~~~l~C~~C~~~~~~~~g~~~~~~~~~ 122 (362)
.+.+++|+||.|+++|.... ..+.+.|+.|+..|++++|++.++.++.
T Consensus 5 ~~LLeiL~CP~ck~~L~~~~---------~~g~LvC~~c~~~YPI~dGIPvmL~~Ea 52 (67)
T 2jny_A 5 PQLLEVLACPKDKGPLRYLE---------SEQLLVNERLNLAYRIDDGIPVLLIDEA 52 (67)
T ss_dssp GGGTCCCBCTTTCCBCEEET---------TTTEEEETTTTEEEEEETTEECCCSSCC
T ss_pred HHHHHHhCCCCCCCcCeEeC---------CCCEEEcCCCCccccCCCCEeeeChhHh
Confidence 45789999999999998754 2478999999999999999999988643
No 286
>2jr6_A UPF0434 protein NMA0874; solution, structural genomics, PSI, structure initiative, northeast structural genomics consort NESG; NMR {Neisseria meningitidis}
Probab=98.41 E-value=1.2e-07 Score=65.71 Aligned_cols=46 Identities=17% Similarity=0.183 Sum_probs=39.7
Q ss_pred ccCCeeeCCCCCCCcccccCCCCccccccCCceecCccCcccccCCceeeeecCC
Q 018003 67 TSKNVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSGVGTHFDMTAAS 121 (362)
Q Consensus 67 ~~~~~l~CP~C~~~l~~~~~~~~~~~~~~~~~l~C~~C~~~~~~~~g~~~~~~~~ 121 (362)
+.+++|+||.|+++|.... ..+.+.|+.|+..|++++|++.++..+
T Consensus 4 ~LL~iL~CP~ck~~L~~~~---------~~~~LiC~~cg~~YPI~dGIPvmL~~E 49 (68)
T 2jr6_A 4 KFLDILVCPVTKGRLEYHQ---------DKQELWSRQAKLAYPIKDGIPYMLENE 49 (68)
T ss_dssp SSSCCCBCSSSCCBCEEET---------TTTEEEETTTTEEEEEETTEECCCTTT
T ss_pred HHhhheECCCCCCcCeEeC---------CCCEEEcCCCCcEecCCCCeeeeChhh
Confidence 5688999999999998754 247899999999999999999998763
No 287
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.40 E-value=1.5e-07 Score=83.60 Aligned_cols=114 Identities=14% Similarity=0.044 Sum_probs=74.3
Q ss_pred HHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCCCC
Q 018003 168 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASS 247 (362)
Q Consensus 168 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~~~ 247 (362)
.+.+.....++.+|||+|||+|.++..+++..+...++|+|++..+...+... .. ...++.....+.....+..+
T Consensus 81 ei~eK~~Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~-~~----~g~~ii~~~~~~dv~~l~~~ 155 (282)
T 3gcz_A 81 WMEERGYVKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMR-TT----LGWNLIRFKDKTDVFNMEVI 155 (282)
T ss_dssp HHHHTTSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCC-CB----TTGGGEEEECSCCGGGSCCC
T ss_pred HHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCcccccccc-cc----CCCceEEeeCCcchhhcCCC
Confidence 33333355678899999999999999988765555789999986532221100 00 01233344433333344568
Q ss_pred cceEEEecccccCCCCHH-------HHHHHHHhhccCC--cEEEEEEEc
Q 018003 248 SIDAVHAGAAIHCWSSPS-------TGVAEISRVLRPG--GVFVGTTYI 287 (362)
Q Consensus 248 ~fD~V~~~~vl~h~~d~~-------~~l~~i~r~Lkpg--G~li~~~~~ 287 (362)
.+|+|++..+.. ...+. .+|.-+.++|+|| |.|++-.+.
T Consensus 156 ~~DvVLSDmApn-sG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~ 203 (282)
T 3gcz_A 156 PGDTLLCDIGES-SPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLC 203 (282)
T ss_dssp CCSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESC
T ss_pred CcCEEEecCccC-CCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEec
Confidence 899999987655 33321 3566777899999 999998776
No 288
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.39 E-value=3.9e-06 Score=77.90 Aligned_cols=88 Identities=17% Similarity=0.178 Sum_probs=70.4
Q ss_pred CCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCCCCcceEEEe
Q 018003 175 PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHA 254 (362)
Q Consensus 175 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~~~~fD~V~~ 254 (362)
..+|.++||+||++|.++..+.+++- .|++||+.+ |...... .+++.++++|......+.+.||+|+|
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~rg~--~V~aVD~~~-l~~~l~~---------~~~V~~~~~d~~~~~~~~~~~D~vvs 276 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKRNM--WVYSVDNGP-MAQSLMD---------TGQVTWLREDGFKFRPTRSNISWMVC 276 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHTTC--EEEEECSSC-CCHHHHT---------TTCEEEECSCTTTCCCCSSCEEEEEE
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHCCC--EEEEEEhhh-cChhhcc---------CCCeEEEeCccccccCCCCCcCEEEE
Confidence 35699999999999999999999875 999999875 2222222 47899999999888767788999999
Q ss_pred cccccCCCCHHHHHHHHHhhccCC
Q 018003 255 GAAIHCWSSPSTGVAEISRVLRPG 278 (362)
Q Consensus 255 ~~vl~h~~d~~~~l~~i~r~Lkpg 278 (362)
-.+ .+|...+.-+.+.|..|
T Consensus 277 Dm~----~~p~~~~~l~~~wl~~~ 296 (375)
T 4auk_A 277 DMV----EKPAKVAALMAQWLVNG 296 (375)
T ss_dssp CCS----SCHHHHHHHHHHHHHTT
T ss_pred cCC----CChHHhHHHHHHHHhcc
Confidence 665 56777777777777766
No 289
>2js4_A UPF0434 protein BB2007; NESG, northeast structural genomics consortium, beta, PSI-2, protein structure initiative; NMR {Bordetella bronchiseptica RB50}
Probab=98.38 E-value=1.3e-07 Score=65.93 Aligned_cols=46 Identities=24% Similarity=0.389 Sum_probs=39.9
Q ss_pred ccCCeeeCCCCCCCcccccCCCCccccccCCceecCccCcccccCCceeeeecCC
Q 018003 67 TSKNVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSGVGTHFDMTAAS 121 (362)
Q Consensus 67 ~~~~~l~CP~C~~~l~~~~~~~~~~~~~~~~~l~C~~C~~~~~~~~g~~~~~~~~ 121 (362)
+.+.+|+||.|+++|.... ..+.+.|+.|+..|++.+|++.++.++
T Consensus 4 ~LL~iL~CP~ck~~L~~~~---------~~~~LiC~~cg~~YPI~dGIPvmL~~E 49 (70)
T 2js4_A 4 RLLDILVCPVCKGRLEFQR---------AQAELVCNADRLAFPVRDGVPIMLEAE 49 (70)
T ss_dssp CCCCCCBCTTTCCBEEEET---------TTTEEEETTTTEEEEEETTEECCCGGG
T ss_pred HHhhheECCCCCCcCEEeC---------CCCEEEcCCCCceecCCCCeeeeChhh
Confidence 4688999999999998754 247899999999999999999998863
No 290
>2hf1_A Tetraacyldisaccharide-1-P 4-kinase; LPXK, lipid A biosynthes structural genomics, PSI-2, protein structure initiative; 1.90A {Chromobacterium violaceum} SCOP: b.171.1.1
Probab=98.36 E-value=1.1e-07 Score=65.82 Aligned_cols=46 Identities=20% Similarity=0.359 Sum_probs=39.4
Q ss_pred ccCCeeeCCCCCCCcccccCCCCccccccCCceecCccCcccccCCceeeeecCC
Q 018003 67 TSKNVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSGVGTHFDMTAAS 121 (362)
Q Consensus 67 ~~~~~l~CP~C~~~l~~~~~~~~~~~~~~~~~l~C~~C~~~~~~~~g~~~~~~~~ 121 (362)
+.+++|+||.|+++|.... ..+.+.|+.|+..|++++|++.++..+
T Consensus 4 ~LL~iL~CP~ck~~L~~~~---------~~~~LiC~~cg~~YPI~dGIPvmL~~E 49 (68)
T 2hf1_A 4 KFLEILVCPLCKGPLVFDK---------SKDELICKGDRLAFPIKDGIPMMLESE 49 (68)
T ss_dssp CCEEECBCTTTCCBCEEET---------TTTEEEETTTTEEEEEETTEECCCGGG
T ss_pred HHhhheECCCCCCcCeEeC---------CCCEEEcCCCCcEecCCCCeeeeChhh
Confidence 4578899999999998754 247899999999999999999998763
No 291
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.35 E-value=1.2e-06 Score=81.85 Aligned_cols=122 Identities=15% Similarity=0.066 Sum_probs=91.0
Q ss_pred HHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCC---CCCCCEEEEEecCCCCC-
Q 018003 168 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESN---FPKENFLLVRADISRLP- 243 (362)
Q Consensus 168 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~---~~~~~~~~~~~d~~~~p- 243 (362)
.....+.+.+|.+|||+.+|.|.-+..++..+....++++|+++..++..++++++..- ....++.+...|...++
T Consensus 139 l~~~~L~~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~ 218 (359)
T 4fzv_A 139 LPVLALGLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGE 218 (359)
T ss_dssp HHHHHHCCCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHH
T ss_pred HHHHHhCCCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcch
Confidence 34456788899999999999999999998887766899999999999999988876510 01257888888887654
Q ss_pred CCCCcceEEEec----c----cccCCCC------H----------HHHHHHHHhhccCCcEEEEEEEccC
Q 018003 244 FASSSIDAVHAG----A----AIHCWSS------P----------STGVAEISRVLRPGGVFVGTTYIVD 289 (362)
Q Consensus 244 ~~~~~fD~V~~~----~----vl~h~~d------~----------~~~l~~i~r~LkpgG~li~~~~~~~ 289 (362)
...+.||.|++- . ++..-++ + ..+|....++|||||+|+.+|=...
T Consensus 219 ~~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~ 288 (359)
T 4fzv_A 219 LEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLS 288 (359)
T ss_dssp HSTTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCC
T ss_pred hccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCc
Confidence 345789999953 2 1211111 1 2578889999999999998875543
No 292
>2pk7_A Uncharacterized protein; NESG, PLR1, putative tetraacyldisaccharide-1-P 4-kinase, Q4K structural genomics, PSI-2; 2.20A {Pseudomonas fluorescens} SCOP: b.171.1.1
Probab=98.35 E-value=1.4e-07 Score=65.47 Aligned_cols=46 Identities=24% Similarity=0.327 Sum_probs=39.3
Q ss_pred ccCCeeeCCCCCCCcccccCCCCccccccCCceecCccCcccccCCceeeeecCC
Q 018003 67 TSKNVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSGVGTHFDMTAAS 121 (362)
Q Consensus 67 ~~~~~l~CP~C~~~l~~~~~~~~~~~~~~~~~l~C~~C~~~~~~~~g~~~~~~~~ 121 (362)
+.+++|+||.|+++|.... ..+.+.|+.|+..|++.+|++.++..+
T Consensus 4 ~LLeiL~CP~ck~~L~~~~---------~~~~LiC~~cg~~YPI~dGIPvmL~~e 49 (69)
T 2pk7_A 4 KLLDILACPICKGPLKLSA---------DKTELISKGAGLAYPIRDGIPVMLESE 49 (69)
T ss_dssp CGGGTCCCTTTCCCCEECT---------TSSEEEETTTTEEEEEETTEECCCGGG
T ss_pred HHHhheeCCCCCCcCeEeC---------CCCEEEcCCCCcEecCcCCeeeeChhh
Confidence 4678899999999998654 247899999999999999999998763
No 293
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.30 E-value=1.2e-05 Score=79.23 Aligned_cols=129 Identities=17% Similarity=0.164 Sum_probs=96.4
Q ss_pred cCCCCCcHHHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHh----C---------CCCEEEEEeCCHHHHHHHHHHHh
Q 018003 156 WGGFPGPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKS----G---------LFSLVVALDYSENMLKQCYEFVQ 222 (362)
Q Consensus 156 ~~~~~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~----~---------~~~~v~gvD~s~~~~~~a~~~~~ 222 (362)
.+.|++|....+.+.+.+.+.++.+|+|-+||+|.|+..+.+. . ....++|+|+++.+...|+-++-
T Consensus 196 ~GqfyTP~~Vv~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~ 275 (530)
T 3ufb_A 196 SGEFYTPRPVVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLL 275 (530)
T ss_dssp CCCCCCCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHH
T ss_pred CceECCcHHHHHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHH
Confidence 3668999999999999999999999999999999998776542 1 12369999999999999998766
Q ss_pred hcCCCCCCCEEEEEecCCCCCCC----CCcceEEEecccccC---------CC------CH-HHHHHHHHhhcc------
Q 018003 223 QESNFPKENFLLVRADISRLPFA----SSSIDAVHAGAAIHC---------WS------SP-STGVAEISRVLR------ 276 (362)
Q Consensus 223 ~~~~~~~~~~~~~~~d~~~~p~~----~~~fD~V~~~~vl~h---------~~------d~-~~~l~~i~r~Lk------ 276 (362)
-+ + .....+..+|....|.. ...||+|+++--+.- ++ +. ..++..+.+.||
T Consensus 276 lh-g--~~~~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l 352 (530)
T 3ufb_A 276 LH-G--LEYPRIDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGS 352 (530)
T ss_dssp HH-T--CSCCEEECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSS
T ss_pred hc-C--CccccccccccccCchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhcc
Confidence 55 1 23446677887665432 347999999854421 11 11 256788888886
Q ss_pred -CCcEEEEEEEc
Q 018003 277 -PGGVFVGTTYI 287 (362)
Q Consensus 277 -pgG~li~~~~~ 287 (362)
|||++.+..|.
T Consensus 353 ~~gGr~avVlP~ 364 (530)
T 3ufb_A 353 DNGGRAAVVVPN 364 (530)
T ss_dssp SSCCEEEEEEEH
T ss_pred CCCceEEEEecc
Confidence 79999999885
No 294
>2kpi_A Uncharacterized protein SCO3027; zinc finger, PSI-2, NESG, all beta, structural genomics, protein structure initiative; NMR {Streptomyces coelicolor}
Probab=98.22 E-value=6.2e-07 Score=59.63 Aligned_cols=45 Identities=24% Similarity=0.424 Sum_probs=39.0
Q ss_pred cccCCeeeCCCCCCCcccccCCCCccccccCCceecC--ccCcccccCCceeeeecCC
Q 018003 66 STSKNVLACPICYKPLTWIGDSSLSIESAAGSSLQCN--TCKKTYSGVGTHFDMTAAS 121 (362)
Q Consensus 66 ~~~~~~l~CP~C~~~l~~~~~~~~~~~~~~~~~l~C~--~C~~~~~~~~g~~~~~~~~ 121 (362)
.+.+++|+||.|+++|.... +.+.|+ .|+..|++++|++.++.++
T Consensus 5 ~~lL~iL~CP~c~~~L~~~~-----------~~L~C~~~~c~~~YPI~dGIPvlL~~e 51 (56)
T 2kpi_A 5 AGLLEILACPACHAPLEERD-----------AELICTGQDCGLAYPVRDGIPVLLVDE 51 (56)
T ss_dssp CSCTTSCCCSSSCSCEEEET-----------TEEEECSSSCCCEEEEETTEECCCTTT
T ss_pred HHHHhheeCCCCCCcceecC-----------CEEEcCCcCCCcEEeeECCEeeeCHHH
Confidence 35689999999999987654 789999 9999999999999888754
No 295
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.18 E-value=4.4e-06 Score=74.58 Aligned_cols=81 Identities=17% Similarity=0.256 Sum_probs=67.1
Q ss_pred HHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC--
Q 018003 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-- 243 (362)
Q Consensus 166 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p-- 243 (362)
.+.+.+.+...+++.+||.+||.|..+..++++ +++|+|+|.++.+++.|++ +.. .++.++++++..++
T Consensus 11 l~e~le~L~~~~gg~~VD~T~G~GGHS~~il~~--~g~VigiD~Dp~Ai~~A~~-L~~------~rv~lv~~~f~~l~~~ 81 (285)
T 1wg8_A 11 YQEALDLLAVRPGGVYVDATLGGAGHARGILER--GGRVIGLDQDPEAVARAKG-LHL------PGLTVVQGNFRHLKRH 81 (285)
T ss_dssp HHHHHHHHTCCTTCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHH-TCC------TTEEEEESCGGGHHHH
T ss_pred HHHHHHhhCCCCCCEEEEeCCCCcHHHHHHHHC--CCEEEEEeCCHHHHHHHHh-hcc------CCEEEEECCcchHHHH
Confidence 456677777788999999999999999999998 4599999999999999998 532 48999999998764
Q ss_pred ---CCCCcceEEEec
Q 018003 244 ---FASSSIDAVHAG 255 (362)
Q Consensus 244 ---~~~~~fD~V~~~ 255 (362)
...+++|.|++.
T Consensus 82 L~~~g~~~vDgIL~D 96 (285)
T 1wg8_A 82 LAALGVERVDGILAD 96 (285)
T ss_dssp HHHTTCSCEEEEEEE
T ss_pred HHHcCCCCcCEEEeC
Confidence 122579999974
No 296
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.06 E-value=1.1e-05 Score=72.65 Aligned_cols=107 Identities=9% Similarity=0.076 Sum_probs=77.7
Q ss_pred CCCCeEEEEcCccchHHHHHHHhC-----CCCEEEEEeCCHH--------------------------HHHHHHHHHhhc
Q 018003 176 VLGGNIIDASCGSGLFSRIFAKSG-----LFSLVVALDYSEN--------------------------MLKQCYEFVQQE 224 (362)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~-----~~~~v~gvD~s~~--------------------------~~~~a~~~~~~~ 224 (362)
...+.|||+|+..|..+..++... ++.+++++|..+. .++.+++++++.
T Consensus 105 ~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~ 184 (282)
T 2wk1_A 105 NVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNY 184 (282)
T ss_dssp TCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHT
T ss_pred CCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHc
Confidence 345799999999999887776531 3568999996421 366788888776
Q ss_pred CCCCCCCEEEEEecCCC-CC-CCCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEE
Q 018003 225 SNFPKENFLLVRADISR-LP-FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 285 (362)
Q Consensus 225 ~~~~~~~~~~~~~d~~~-~p-~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~ 285 (362)
+....++.++.+|+.+ +| ++.++||+|+.-.-.+ ..-...|+.+.+.|+|||++++-.
T Consensus 185 -gl~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~y--~~~~~~Le~~~p~L~pGGiIv~DD 244 (282)
T 2wk1_A 185 -DLLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDLY--ESTWDTLTNLYPKVSVGGYVIVDD 244 (282)
T ss_dssp -TCCSTTEEEEESCHHHHSTTCCCCCEEEEEECCCSH--HHHHHHHHHHGGGEEEEEEEEESS
T ss_pred -CCCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCcc--ccHHHHHHHHHhhcCCCEEEEEcC
Confidence 2223789999999854 33 3457899999865321 123478999999999999988754
No 297
>2k5r_A Uncharacterized protein XF2673; solution structure, structural genomics, PSI-2, protein structure initiative; NMR {Xylella fastidiosa TEMECULA1}
Probab=98.06 E-value=1.7e-06 Score=63.83 Aligned_cols=54 Identities=11% Similarity=0.094 Sum_probs=42.0
Q ss_pred ccCCeeeCCCCCCCcccccC------------------CCCccccccCCceecCccCcccccCCceeeeecC
Q 018003 67 TSKNVLACPICYKPLTWIGD------------------SSLSIESAAGSSLQCNTCKKTYSGVGTHFDMTAA 120 (362)
Q Consensus 67 ~~~~~l~CP~C~~~l~~~~~------------------~~~~~~~~~~~~l~C~~C~~~~~~~~g~~~~~~~ 120 (362)
+.+.+|+||.|+++|..... .....+.+..+.+.|+.|+..|++++|++.++..
T Consensus 4 ~LLdILaCP~cK~pL~l~~~~~~~~~~ca~~~~~~~~~~~~~~~e~~~~~LvC~~c~~~YPI~dGIPvmL~~ 75 (97)
T 2k5r_A 4 KLLHLLCSPDTRQPLSLLESKGLEALNKAIVSGTVQRADGSIQNQSLHEALITRDRKQVFRIEDSIPVLLPE 75 (97)
T ss_dssp TTCSSCCCCTTSSCCEECCHHHHHHHHHHHHHTCCBCTTSCBCCCCCSEEEECTTSCEEEEEETTEEECCGG
T ss_pred HHhhheECCCCCCcccccccchhhhhhhhhhccccccccccccccccCCeEEcCCCCCCccccCCCcccChH
Confidence 46889999999998876432 1112344556789999999999999999999876
No 298
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.04 E-value=6.7e-06 Score=73.48 Aligned_cols=106 Identities=14% Similarity=0.131 Sum_probs=67.8
Q ss_pred CCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCCCCcceEEEec
Q 018003 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAG 255 (362)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~~~~fD~V~~~ 255 (362)
.++.+|||+||++|.++..+.+......|+|+|+...+...... ... ...++.....+.....+..+.+|+|++.
T Consensus 80 ~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~-~~~----~~~~iv~~~~~~di~~l~~~~~DlVlsD 154 (300)
T 3eld_A 80 RITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIH-MQT----LGWNIVKFKDKSNVFTMPTEPSDTLLCD 154 (300)
T ss_dssp CCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC-CCB----TTGGGEEEECSCCTTTSCCCCCSEEEEC
T ss_pred CCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccccccc-ccc----cCCceEEeecCceeeecCCCCcCEEeec
Confidence 46889999999999999999986544578999997542110000 000 0112233333322223446789999997
Q ss_pred ccccCCCCH-------HHHHHHHHhhccCC-cEEEEEEEc
Q 018003 256 AAIHCWSSP-------STGVAEISRVLRPG-GVFVGTTYI 287 (362)
Q Consensus 256 ~vl~h~~d~-------~~~l~~i~r~Lkpg-G~li~~~~~ 287 (362)
..-. ...+ ..+|.-+.++|+|| |.|++-.+.
T Consensus 155 ~APn-sG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~ 193 (300)
T 3eld_A 155 IGES-SSNPLVERDRTMKVLENFERWKHVNTENFCVKVLA 193 (300)
T ss_dssp CCCC-CSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESS
T ss_pred CcCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecc
Confidence 6544 3333 24577778999999 999998776
No 299
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=97.99 E-value=1.1e-05 Score=75.06 Aligned_cols=108 Identities=13% Similarity=0.194 Sum_probs=77.9
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCC-----CCCCCEEEEEecCCCC----CCCCC
Q 018003 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESN-----FPKENFLLVRADISRL----PFASS 247 (362)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-----~~~~~~~~~~~d~~~~----p~~~~ 247 (362)
++++||-||.|.|..++.+.+.. ..+++.+|+++..++.|++.+....+ ...++++++.+|.... +-..+
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh~-~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~ 283 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKLK-PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 283 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTC-CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCeEEEECCCcHHHHHHHHhcC-CceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccC
Confidence 46799999999999999998864 47999999999999999997643200 0124688999997543 11346
Q ss_pred cceEEEecccccC-CCCH---------HHHHHHHHhhccCCcEEEEEE
Q 018003 248 SIDAVHAGAAIHC-WSSP---------STGVAEISRVLRPGGVFVGTT 285 (362)
Q Consensus 248 ~fD~V~~~~vl~h-~~d~---------~~~l~~i~r~LkpgG~li~~~ 285 (362)
+||+|+.--.-.. -.+| ..+++.+++.|+|||+++...
T Consensus 284 ~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~ 331 (381)
T 3c6k_A 284 EFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 331 (381)
T ss_dssp CEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEec
Confidence 7999997532111 1122 367889999999999998653
No 300
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.93 E-value=2.8e-05 Score=70.84 Aligned_cols=60 Identities=17% Similarity=0.196 Sum_probs=52.2
Q ss_pred cHHHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhc
Q 018003 162 PEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE 224 (362)
Q Consensus 162 ~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~ 224 (362)
+...++.+..... .++..|||++||+|..+..+++.|. +++|+|+++.+++.|+++++..
T Consensus 221 p~~l~~~~i~~~~-~~~~~vlD~f~GsGt~~~~a~~~g~--~~~g~e~~~~~~~~a~~r~~~~ 280 (297)
T 2zig_A 221 PLELAERLVRMFS-FVGDVVLDPFAGTGTTLIAAARWGR--RALGVELVPRYAQLAKERFARE 280 (297)
T ss_dssp CHHHHHHHHHHHC-CTTCEEEETTCTTTHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHHh
Confidence 4666777777665 5688999999999999999999876 9999999999999999998775
No 301
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.93 E-value=7.1e-05 Score=66.59 Aligned_cols=113 Identities=14% Similarity=0.089 Sum_probs=76.8
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHH--HHHHHhhcCCCCCCCEEEEEe-cCCCCC
Q 018003 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQ--CYEFVQQESNFPKENFLLVRA-DISRLP 243 (362)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~--a~~~~~~~~~~~~~~~~~~~~-d~~~~p 243 (362)
..+.+.....++++|||+||++|.++.+++.......|+|+|+-..-.+. ..+. .....+.+..+ |+..++
T Consensus 84 ~ei~~~~~l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P~~~~q------l~w~lV~~~~~~Dv~~l~ 157 (321)
T 3lkz_A 84 RWLVERRFLEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEPQLVQS------YGWNIVTMKSGVDVFYRP 157 (321)
T ss_dssp HHHHHTTSCCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCCCCCCB------TTGGGEEEECSCCTTSSC
T ss_pred HHHHHhcCCCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCcchhhh------cCCcceEEEeccCHhhCC
Confidence 34444445567889999999999999977776444579999997641100 0000 01134777777 887776
Q ss_pred CCCCcceEEEecccccCCCCHH-------HHHHHHHhhccCC-cEEEEEEEcc
Q 018003 244 FASSSIDAVHAGAAIHCWSSPS-------TGVAEISRVLRPG-GVFVGTTYIV 288 (362)
Q Consensus 244 ~~~~~fD~V~~~~vl~h~~d~~-------~~l~~i~r~Lkpg-G~li~~~~~~ 288 (362)
. ..+|+|+|.-. +--++|. .+|+-+.+.|++| |-|++-...+
T Consensus 158 ~--~~~D~ivcDig-eSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~p 207 (321)
T 3lkz_A 158 S--ECCDTLLCDIG-ESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLCP 207 (321)
T ss_dssp C--CCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESCT
T ss_pred C--CCCCEEEEECc-cCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcCC
Confidence 3 56999999777 7767764 3566667889999 8888876654
No 302
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=97.90 E-value=3.4e-05 Score=61.60 Aligned_cols=96 Identities=13% Similarity=0.103 Sum_probs=63.1
Q ss_pred HHHHhhcCCCCCCeEEEEcCccc-hHHHHHHH-hCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCC
Q 018003 167 ELMKGYLKPVLGGNIIDASCGSG-LFSRIFAK-SGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF 244 (362)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G-~~~~~l~~-~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~ 244 (362)
+.+.+... ++.+|||||||.| ..+..|++ .+. .|+++|+++.++ .+++.|+.+...
T Consensus 27 eYI~~~~~--~~~rVlEVG~G~g~~vA~~La~~~g~--~V~atDInp~Av------------------~~v~dDiF~P~~ 84 (153)
T 2k4m_A 27 VYIIRCSG--PGTRVVEVGAGRFLYVSDYIRKHSKV--DLVLTDIKPSHG------------------GIVRDDITSPRM 84 (153)
T ss_dssp HHHHHHSC--SSSEEEEETCTTCCHHHHHHHHHSCC--EEEEECSSCSST------------------TEECCCSSSCCH
T ss_pred HHHHhcCC--CCCcEEEEccCCChHHHHHHHHhCCC--eEEEEECCcccc------------------ceEEccCCCCcc
Confidence 34444433 3679999999999 59999987 665 899999998532 278889877332
Q ss_pred CC-CcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEccC
Q 018003 245 AS-SSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVD 289 (362)
Q Consensus 245 ~~-~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~~~ 289 (362)
.- +.||+|.+..- -++.+..+.++++.. |.-+++.....+
T Consensus 85 ~~Y~~~DLIYsirP---P~El~~~i~~lA~~v--~adliI~pL~~E 125 (153)
T 2k4m_A 85 EIYRGAALIYSIRP---PAEIHSSLMRVADAV--GARLIIKPLTGE 125 (153)
T ss_dssp HHHTTEEEEEEESC---CTTTHHHHHHHHHHH--TCEEEEECBTTB
T ss_pred cccCCcCEEEEcCC---CHHHHHHHHHHHHHc--CCCEEEEcCCCC
Confidence 11 47999977543 123445555665533 556776655443
No 303
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.87 E-value=0.00015 Score=62.47 Aligned_cols=115 Identities=17% Similarity=0.136 Sum_probs=76.1
Q ss_pred HHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEe-cCCCCCCC
Q 018003 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRA-DISRLPFA 245 (362)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~-d~~~~p~~ 245 (362)
..+.+.....++++|||+||++|.++.+++.......|+|+|+-..-.+.-+ .....+...+.|..+ |+..++
T Consensus 68 ~ei~ek~~l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P~----~~~s~gwn~v~fk~gvDv~~~~-- 141 (267)
T 3p8z_A 68 QWFVERNMVIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEPV----PMSTYGWNIVKLMSGKDVFYLP-- 141 (267)
T ss_dssp HHHHHTTSSCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCC----CCCCTTTTSEEEECSCCGGGCC--
T ss_pred HHHHHhcCCCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCcc----hhhhcCcCceEEEeccceeecC--
Confidence 3344333556788999999999999998777654458999999763210000 000112367899999 976665
Q ss_pred CCcceEEEecccccCCCCHH-------HHHHHHHhhccCCcEEEEEEEccC
Q 018003 246 SSSIDAVHAGAAIHCWSSPS-------TGVAEISRVLRPGGVFVGTTYIVD 289 (362)
Q Consensus 246 ~~~fD~V~~~~vl~h~~d~~-------~~l~~i~r~LkpgG~li~~~~~~~ 289 (362)
...+|.|+|.-. +--++|. .+|+-+.+.|++ |-+++-.....
T Consensus 142 ~~~~DtllcDIg-eSs~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~py 190 (267)
T 3p8z_A 142 PEKCDTLLCDIG-ESSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLNPY 190 (267)
T ss_dssp CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESCCC
T ss_pred CccccEEEEecC-CCCCChhhhhhHHHHHHHHHHHhccc-CCEEEEEccCC
Confidence 266999998655 3334543 356666789998 78888766543
No 304
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=97.87 E-value=0.00017 Score=66.65 Aligned_cols=161 Identities=11% Similarity=0.107 Sum_probs=103.4
Q ss_pred HhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcC------CC------------CCCC
Q 018003 170 KGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES------NF------------PKEN 231 (362)
Q Consensus 170 ~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~------~~------------~~~~ 231 (362)
.+++...+...|+.+|||.......+...++...++-+|. |+.++.-++.+.... +. ...+
T Consensus 90 ~~fl~~~~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 168 (334)
T 1rjd_A 90 LEFLVANEKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGR 168 (334)
T ss_dssp HHHHHHCSSEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSS
T ss_pred HHHHHHCCCcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCc
Confidence 3344323457899999999999888887655567788887 777777777665530 00 1367
Q ss_pred EEEEEecCCCCCC---------CCCcceEEEecccccCCCCH--HHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHH
Q 018003 232 FLLVRADISRLPF---------ASSSIDAVHAGAAIHCWSSP--STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRL 300 (362)
Q Consensus 232 ~~~~~~d~~~~p~---------~~~~fD~V~~~~vl~h~~d~--~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~ 300 (362)
..++.+|+.+... ......++++-.++.+++.. ..+++.+.+.. |+|.+++.++..... ...++...
T Consensus 169 ~~~v~~DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~e~i~~~~-~~~~fg~~ 246 (334)
T 1rjd_A 169 YKLAACDLNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWISYDPIGGSQ-PNDRFGAI 246 (334)
T ss_dssp EEEEECCTTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEECCCCS-TTCCHHHH
T ss_pred eEEEecCCCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEEEEeccCCCC-CcchHHHH
Confidence 8999999987421 23457889999999998643 36777787776 788887666654311 11122222
Q ss_pred HHHhhh--hcccccccccccCCHHHHHHHHHHCCCE
Q 018003 301 LRQVCF--LDLKIVGFSIPVLGFDDLKRIFRQFQLV 334 (362)
Q Consensus 301 ~~~~~~--~~~~~~~~~~~~~s~~~l~~ll~~~Gf~ 334 (362)
....+. ......+ -..+.+.++..+.|.++||.
T Consensus 247 m~~~l~~~rg~~l~~-~~~y~s~~~~~~rl~~~Gf~ 281 (334)
T 1rjd_A 247 MQSNLKESRNLEMPT-LMTYNSKEKYASRWSAAPNV 281 (334)
T ss_dssp HHHHHHHHHCCCCTT-TTTTCSHHHHHGGGTTSSEE
T ss_pred HHHHhhcccCCcccc-cccCCCHHHHHHHHHHCCCC
Confidence 211111 0011122 23567999999999999997
No 305
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.84 E-value=4e-05 Score=67.00 Aligned_cols=104 Identities=16% Similarity=0.089 Sum_probs=63.5
Q ss_pred CCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCE---EEEEe-cCCCCCCCCCcc
Q 018003 174 KPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENF---LLVRA-DISRLPFASSSI 249 (362)
Q Consensus 174 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~---~~~~~-d~~~~p~~~~~f 249 (362)
-..++.+|||+||+.|.++..+++.-....|.|.++.... . +... .....++ .+.++ |+..++ ...+
T Consensus 70 likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~-~-----~~P~-~~~~~Gv~~i~~~~G~Df~~~~--~~~~ 140 (269)
T 2px2_A 70 FVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG-H-----EEPM-LMQSYGWNIVTMKSGVDVFYKP--SEIS 140 (269)
T ss_dssp SCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT-S-----CCCC-CCCSTTGGGEEEECSCCGGGSC--CCCC
T ss_pred CCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc-c-----cCCC-cccCCCceEEEeeccCCccCCC--CCCC
Confidence 4557999999999999999999886211233444443220 0 0000 0000233 44446 987653 4579
Q ss_pred eEEEecccccCCCCHH-------HHHHHHHhhccCCc-EEEEEEEc
Q 018003 250 DAVHAGAAIHCWSSPS-------TGVAEISRVLRPGG-VFVGTTYI 287 (362)
Q Consensus 250 D~V~~~~vl~h~~d~~-------~~l~~i~r~LkpgG-~li~~~~~ 287 (362)
|+|+|-..=. -.++. .+|.-+.++|+||| .|++-.+.
T Consensus 141 DvVLSDMAPn-SG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFq 185 (269)
T 2px2_A 141 DTLLCDIGES-SPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILC 185 (269)
T ss_dssp SEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred CEEEeCCCCC-CCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECC
Confidence 9999866432 22221 25666678999999 99988776
No 306
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=97.77 E-value=2.8e-06 Score=97.26 Aligned_cols=149 Identities=14% Similarity=0.086 Sum_probs=70.1
Q ss_pred CCCCeEEEEcCccchHHHHHHHhC---C--CCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCC-CCCCCcc
Q 018003 176 VLGGNIIDASCGSGLFSRIFAKSG---L--FSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-PFASSSI 249 (362)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~---~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~-p~~~~~f 249 (362)
.+..+|||||.|+|..+..+.+.. + ..+++..|+|+...+.++++++.. ++..-.-|.... ++..++|
T Consensus 1239 ~~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~------di~~~~~d~~~~~~~~~~~y 1312 (2512)
T 2vz8_A 1239 SPKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQL------HVTQGQWDPANPAPGSLGKA 1312 (2512)
T ss_dssp SSEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHH------TEEEECCCSSCCCC-----C
T ss_pred CCCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhc------ccccccccccccccCCCCce
Confidence 356799999999998765544431 1 247899999998887787766543 222211233332 3445679
Q ss_pred eEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhcccccccccccCCHHHHHHHHH
Q 018003 250 DAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVGFSIPVLGFDDLKRIFR 329 (362)
Q Consensus 250 D~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~ 329 (362)
|+|++..++|-.++....|++++++|||||.+++....... ++.....++.. .... ...+.+.++|.++|.
T Consensus 1313 dlvia~~vl~~t~~~~~~l~~~~~lL~p~G~l~~~e~~~~~------~~g~~~~~~~~--~~r~-~~~~~~~~~w~~~l~ 1383 (2512)
T 2vz8_A 1313 DLLVCNCALATLGDPAVAVGNMAATLKEGGFLLLHTLLAGH------PLGEMVGFLTS--PEQG-GRHLLSQDQWESLFA 1383 (2512)
T ss_dssp CEEEEECC--------------------CCEEEEEEC-----------------------------------CTTTTSST
T ss_pred eEEEEcccccccccHHHHHHHHHHhcCCCcEEEEEeccccc------ccccccccccc--cccc-CCcccCHHHHHHHHH
Confidence 99999999998889999999999999999999887643211 01111111100 0001 234567778889999
Q ss_pred HCCCEEEEEE
Q 018003 330 QFQLVVNLKL 339 (362)
Q Consensus 330 ~~Gf~~v~~~ 339 (362)
++||..+...
T Consensus 1384 ~~gf~~~~~~ 1393 (2512)
T 2vz8_A 1384 GASLHLVALK 1393 (2512)
T ss_dssp TTTEEEEEEE
T ss_pred hCCCceeeec
Confidence 9999876543
No 307
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.52 E-value=0.00011 Score=67.01 Aligned_cols=83 Identities=20% Similarity=0.262 Sum_probs=67.2
Q ss_pred HHHHHhhcCCCCCCeEEEEcCccchHHHHHHHh-CCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC-
Q 018003 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP- 243 (362)
Q Consensus 166 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p- 243 (362)
++.+.+.+...+++.++|..||.|..+..+++. ++.++|+|+|.++.+++.++ ++ . ..++.++++++..+.
T Consensus 46 l~Evl~~L~i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL--~----~~Rv~lv~~nF~~l~~ 118 (347)
T 3tka_A 46 LDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI--D----DPRFSIIHGPFSALGE 118 (347)
T ss_dssp THHHHHHTCCCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC--C----CTTEEEEESCGGGHHH
T ss_pred HHHHHHhhCCCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh--c----CCcEEEEeCCHHHHHH
Confidence 456777788888999999999999999999887 57789999999999999984 43 1 468999999987763
Q ss_pred -CC----CCcceEEEec
Q 018003 244 -FA----SSSIDAVHAG 255 (362)
Q Consensus 244 -~~----~~~fD~V~~~ 255 (362)
+. .+++|.|++.
T Consensus 119 ~L~~~g~~~~vDgILfD 135 (347)
T 3tka_A 119 YVAERDLIGKIDGILLD 135 (347)
T ss_dssp HHHHTTCTTCEEEEEEE
T ss_pred HHHhcCCCCcccEEEEC
Confidence 11 1369999976
No 308
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=97.45 E-value=0.0012 Score=59.69 Aligned_cols=140 Identities=11% Similarity=0.119 Sum_probs=82.8
Q ss_pred CCeEEEEcCccchHHHHHH----HhCCCCE--EEEEeCCH--------H-HHHHHHHHHhhcC--CCCCCCEEEEEecCC
Q 018003 178 GGNIIDASCGSGLFSRIFA----KSGLFSL--VVALDYSE--------N-MLKQCYEFVQQES--NFPKENFLLVRADIS 240 (362)
Q Consensus 178 ~~~vLDiGcG~G~~~~~l~----~~~~~~~--v~gvD~s~--------~-~~~~a~~~~~~~~--~~~~~~~~~~~~d~~ 240 (362)
.-+|||+|-|+|.+..... +.++..+ ++.+|..+ . ..+..+....... ....-.+.++.+|+.
T Consensus 97 ~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa~ 176 (308)
T 3vyw_A 97 VIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDAR 176 (308)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCHH
T ss_pred CcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechHH
Confidence 4589999999998754322 3355444 56666421 1 1112222222110 011224567788874
Q ss_pred C-CC-CCCCcceEEEecccccCCCCH----HHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHHhhhhccccccc
Q 018003 241 R-LP-FASSSIDAVHAGAAIHCWSSP----STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQVCFLDLKIVGF 314 (362)
Q Consensus 241 ~-~p-~~~~~fD~V~~~~vl~h~~d~----~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (362)
. ++ +.+..||+|+.-. +---.+| ..+++.++++++|||+|+ |+.
T Consensus 177 ~~l~~l~~~~~Da~flDg-FsP~kNPeLWs~e~f~~l~~~~~pgg~la--TYt--------------------------- 226 (308)
T 3vyw_A 177 KRIKEVENFKADAVFHDA-FSPYKNPELWTLDFLSLIKERIDEKGYWV--SYS--------------------------- 226 (308)
T ss_dssp HHGGGCCSCCEEEEEECC-SCTTTSGGGGSHHHHHHHHTTEEEEEEEE--ESC---------------------------
T ss_pred HHHhhhcccceeEEEeCC-CCcccCcccCCHHHHHHHHHHhCCCcEEE--EEe---------------------------
Confidence 4 33 3455799999743 2222355 389999999999999887 222
Q ss_pred ccccCCHHHHHHHHHHCCCEEEEEEEecee-EEEEeeCc
Q 018003 315 SIPVLGFDDLKRIFRQFQLVVNLKLFYGHI-QHYIVKIP 352 (362)
Q Consensus 315 ~~~~~s~~~l~~ll~~~Gf~~v~~~~~g~~-~~~~~~kp 352 (362)
....+++.|+++||++.+.--+|.- .+..+.++
T Consensus 227 -----aag~VRR~L~~aGF~V~k~~G~g~KReml~A~~~ 260 (308)
T 3vyw_A 227 -----SSLSVRKSLLTLGFKVGSSREIGRKRKGTVASLK 260 (308)
T ss_dssp -----CCHHHHHHHHHTTCEEEEEECC---CEEEEEESS
T ss_pred -----CcHHHHHHHHHCCCEEEecCCCCCCCceeEEecC
Confidence 1236889999999999887666554 55555554
No 309
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.32 E-value=0.00053 Score=63.61 Aligned_cols=74 Identities=14% Similarity=0.077 Sum_probs=59.1
Q ss_pred HHHHHHHHhhcCCC------CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEE
Q 018003 163 EKEFELMKGYLKPV------LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVR 236 (362)
Q Consensus 163 ~~~~~~l~~~l~~~------~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~ 236 (362)
...++.+.+.+... ++..|||||.|.|.++..|.+.....+++++|+++.++...++.+ . ..++.++.
T Consensus 38 ~~i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~-~-----~~~l~ii~ 111 (353)
T 1i4w_A 38 PTVYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF-E-----GSPLQILK 111 (353)
T ss_dssp HHHHHHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT-T-----TSSCEEEC
T ss_pred HHHHHHHHHhccCCcccCcCCCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc-c-----CCCEEEEE
Confidence 45567777776654 357899999999999999998732348999999999999988875 2 36899999
Q ss_pred ecCCCC
Q 018003 237 ADISRL 242 (362)
Q Consensus 237 ~d~~~~ 242 (362)
+|+..+
T Consensus 112 ~D~l~~ 117 (353)
T 1i4w_A 112 RDPYDW 117 (353)
T ss_dssp SCTTCH
T ss_pred CCccch
Confidence 999654
No 310
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.17 E-value=0.002 Score=57.25 Aligned_cols=96 Identities=11% Similarity=0.035 Sum_probs=64.0
Q ss_pred CCCCCeEEEEcC------ccchHHHHHHHhCCC-CEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCCCC
Q 018003 175 PVLGGNIIDASC------GSGLFSRIFAKSGLF-SLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASS 247 (362)
Q Consensus 175 ~~~~~~vLDiGc------G~G~~~~~l~~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~~~ 247 (362)
...+.+|||+|+ ..|.. .+.+.++. +.++++|+.+-. .... .++++|...... .+
T Consensus 107 vp~gmrVLDLGA~s~kg~APGS~--VLr~~~p~g~~VVavDL~~~~--------------sda~-~~IqGD~~~~~~-~~ 168 (344)
T 3r24_A 107 VPYNMRVIHFGAGSDKGVAPGTA--VLRQWLPTGTLLVDSDLNDFV--------------SDAD-STLIGDCATVHT-AN 168 (344)
T ss_dssp CCTTCEEEEESCCCTTSBCHHHH--HHHHHSCTTCEEEEEESSCCB--------------CSSS-EEEESCGGGEEE-SS
T ss_pred ecCCCEEEeCCCCCCCCCCCcHH--HHHHhCCCCcEEEEeeCcccc--------------cCCC-eEEEcccccccc-CC
Confidence 346899999996 56663 44445664 599999998731 0123 459999765432 47
Q ss_pred cceEEEecccc---cCCC--C------HHHHHHHHHhhccCCcEEEEEEEcc
Q 018003 248 SIDAVHAGAAI---HCWS--S------PSTGVAEISRVLRPGGVFVGTTYIV 288 (362)
Q Consensus 248 ~fD~V~~~~vl---~h~~--d------~~~~l~~i~r~LkpgG~li~~~~~~ 288 (362)
+||+|++-..= -+.. . -+.++.-+.+.|+|||.|++-.+..
T Consensus 169 k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQG 220 (344)
T 3r24_A 169 KWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEH 220 (344)
T ss_dssp CEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSS
T ss_pred CCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecC
Confidence 89999986431 1111 1 1355666788999999999987654
No 311
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.15 E-value=0.0012 Score=58.69 Aligned_cols=61 Identities=18% Similarity=0.152 Sum_probs=51.2
Q ss_pred CcHHHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhc
Q 018003 161 GPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE 224 (362)
Q Consensus 161 ~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~ 224 (362)
.|...++.+.+... .++..|||..||+|..+..+.+.+. +++|+|+++.+++.++++++..
T Consensus 197 ~p~~l~~~~i~~~~-~~~~~vlD~f~GsGtt~~~a~~~gr--~~ig~e~~~~~~~~~~~r~~~~ 257 (260)
T 1g60_A 197 KPRDLIERIIRASS-NPNDLVLDCFMGSGTTAIVAKKLGR--NFIGCDMNAEYVNQANFVLNQL 257 (260)
T ss_dssp CCHHHHHHHHHHHC-CTTCEEEESSCTTCHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHC-
T ss_pred CCHHHHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHhc
Confidence 34666777776654 5688999999999999999998876 9999999999999999987654
No 312
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=97.15 E-value=0.0084 Score=54.61 Aligned_cols=157 Identities=12% Similarity=-0.011 Sum_probs=98.7
Q ss_pred CeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC---------CCCCcc
Q 018003 179 GNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP---------FASSSI 249 (362)
Q Consensus 179 ~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p---------~~~~~f 249 (362)
..|+++|||.=.....+.. .....++-+| .+..++..++.+.+.......+..++.+|+.+ . +.....
T Consensus 104 ~QvV~LGaGlDTra~Rl~~-~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d-~~~~~l~~~g~d~~~P 180 (310)
T 2uyo_A 104 RQFVILASGLDSRAYRLDW-PTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLRQ-DWPPALRSAGFDPSAR 180 (310)
T ss_dssp CEEEEETCTTCCHHHHSCC-CTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTTS-CHHHHHHHTTCCTTSC
T ss_pred CeEEEeCCCCCchhhhccC-CCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchHh-hHHHHHHhccCCCCCC
Confidence 4799999998776555431 2236899999 59999999998875322235678999999976 2 112234
Q ss_pred eEEEecccccCCCC--HHHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHH-Hhhhhccc----cccccccc-CC-
Q 018003 250 DAVHAGAAIHCWSS--PSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLR-QVCFLDLK----IVGFSIPV-LG- 320 (362)
Q Consensus 250 D~V~~~~vl~h~~d--~~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~-~~~~~~~~----~~~~~~~~-~s- 320 (362)
=++++-.+++++++ ...+++.+...+.||+.+++.....+.. .......... ..+. ... ..-....+ .+
T Consensus 181 t~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~~~~~~~-~~~~~~~~~~~~~~~-~~g~~~~~~l~~~~~~~~~ 258 (310)
T 2uyo_A 181 TAWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVETSPLHGD-EWREQMQLRFRRVSD-ALGFEQAVDVQELIYHDEN 258 (310)
T ss_dssp EEEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEECCCTTCS-HHHHHHHHHHHHHHC------------CCTTCCTT
T ss_pred EEEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEecCCCCc-chhHHHHHHHHHHHH-HcCCcCCCCccccccCCCC
Confidence 47888899999975 3478889999889999988876554321 0100111111 1111 000 00002223 25
Q ss_pred HHHHHHHHHHCCCEEEEEEEe
Q 018003 321 FDDLKRIFRQFQLVVNLKLFY 341 (362)
Q Consensus 321 ~~~l~~ll~~~Gf~~v~~~~~ 341 (362)
.++..+.|.+.||+.+ ....
T Consensus 259 ~~~~~~~f~~~G~~~~-~~~~ 278 (310)
T 2uyo_A 259 RAVVADWLNRHGWRAT-AQSA 278 (310)
T ss_dssp CCCHHHHHTTTTEEEE-EEEH
T ss_pred hHHHHHHHHHCcCccc-cCCH
Confidence 7889999999999887 4443
No 313
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=96.61 E-value=0.17 Score=46.41 Aligned_cols=159 Identities=9% Similarity=0.089 Sum_probs=96.9
Q ss_pred CCCeEEEEcCccchHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHhhcC---------------C-----CCCCCEEEE
Q 018003 177 LGGNIIDASCGSGLFSRIFAKSG-LFSLVVALDYSENMLKQCYEFVQQES---------------N-----FPKENFLLV 235 (362)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~---------------~-----~~~~~~~~~ 235 (362)
+...|+-+|||.=.....+...+ +...++=+|. |+.++.=++.+.... . ....+..++
T Consensus 90 ~~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~-P~vi~~K~~~l~~~~~l~~~lg~~~~~~~~~~~~~~l~s~~y~~v 168 (334)
T 3iei_A 90 CHCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDF-PMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKRYAVI 168 (334)
T ss_dssp TCSEEEEETCTTCCHHHHHHHTTCCCSEEEEEEC-HHHHHHHHHHHHHCHHHHHHHHHHSSSSSCBCCTTEEECSSEEEE
T ss_pred CCCEEEEeCCCcCchHHHhcCCCCCCCeEEECCc-HHHHHHHHHHHhhchhhhhhhcccccccccccccccCCCCceEEE
Confidence 35689999999988777776642 3457777887 444444333333200 0 014678899
Q ss_pred EecCCCCC----------CCCCcceEEEecccccCCCCH--HHHHHHHHhhccCCcEEEEEEEccCCCCcchhhhHHHHH
Q 018003 236 RADISRLP----------FASSSIDAVHAGAAIHCWSSP--STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQ 303 (362)
Q Consensus 236 ~~d~~~~p----------~~~~~fD~V~~~~vl~h~~d~--~~~l~~i~r~LkpgG~li~~~~~~~~~~~~~~~~~~~~~ 303 (362)
.+|+.+.. +.....=++++-.++.+++.. ..+|+.+.+.. |+|.+++.++.... .++.+....
T Consensus 169 ~~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL~~~~~~~ll~~ia~~f-~~~~~i~yE~i~p~----d~fg~~M~~ 243 (334)
T 3iei_A 169 GADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYMTPEQSANLLKWAANSF-ERAMFINYEQVNMG----DRFGQIMIE 243 (334)
T ss_dssp ECCTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEECCTT----SHHHHHHHH
T ss_pred ccccccchhHHHHHHhcCCCCCCCEEEEEchhhhCCCHHHHHHHHHHHHHhC-CCceEEEEeccCCC----CHHHHHHHH
Confidence 99997631 333445588888889988533 36777777766 55666666665322 233322222
Q ss_pred hhh-hcccccccccccCCHHHHHHHHHHCCCEEEEEEEec
Q 018003 304 VCF-LDLKIVGFSIPVLGFDDLKRIFRQFQLVVNLKLFYG 342 (362)
Q Consensus 304 ~~~-~~~~~~~~~~~~~s~~~l~~ll~~~Gf~~v~~~~~g 342 (362)
.+. ......+ -..|.+.++..+.+.++||..+......
T Consensus 244 ~l~~~g~pl~s-l~~y~t~~~~~~r~~~~Gw~~~~~~d~~ 282 (334)
T 3iei_A 244 NLRRRQCDLAG-VETCKSLESQKERLLSNGWETASAVDMM 282 (334)
T ss_dssp HHHTTTCCCTT-GGGGGCHHHHHHHHHTTTCSEEEEEEHH
T ss_pred HHHHhCCCCcc-cccCCCHHHHHHHHHHcCCCcceeecHH
Confidence 221 0111222 3466788999999999999887765543
No 314
>1pft_A TFIIB, PFTFIIBN; N-terminal domain, transcription initiation factor; NMR {Pyrococcus furiosus} SCOP: g.41.3.1
Probab=96.12 E-value=0.003 Score=40.73 Aligned_cols=32 Identities=19% Similarity=0.473 Sum_probs=24.5
Q ss_pred CeeeCCCCCC-CcccccCCCCccccccCCceecCccCccccc
Q 018003 70 NVLACPICYK-PLTWIGDSSLSIESAAGSSLQCNTCKKTYSG 110 (362)
Q Consensus 70 ~~l~CP~C~~-~l~~~~~~~~~~~~~~~~~l~C~~C~~~~~~ 110 (362)
..+.||.|++ ++.... ..+.+.|..||.+|..
T Consensus 4 ~~~~CP~C~~~~l~~d~---------~~gelvC~~CG~v~~e 36 (50)
T 1pft_A 4 KQKVCPACESAELIYDP---------ERGEIVCAKCGYVIEE 36 (50)
T ss_dssp SCCSCTTTSCCCEEEET---------TTTEEEESSSCCBCCC
T ss_pred ccEeCcCCCCcceEEcC---------CCCeEECcccCCcccc
Confidence 3578999998 665543 2368999999998875
No 315
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=95.89 E-value=0.062 Score=50.48 Aligned_cols=104 Identities=16% Similarity=0.158 Sum_probs=70.1
Q ss_pred hcCCCCCCeEEEEcCcc-chHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCC-CC------
Q 018003 172 YLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR-LP------ 243 (362)
Q Consensus 172 ~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~-~p------ 243 (362)
.....++.+||-+|+|. |.++..+++..-...|+++|.+++.++.+++. ....+...-.. +.
T Consensus 180 ~~~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~l----------Ga~~i~~~~~~~~~~~v~~~ 249 (398)
T 1kol_A 180 TAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQ----------GFEIADLSLDTPLHEQIAAL 249 (398)
T ss_dssp HTTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT----------TCEEEETTSSSCHHHHHHHH
T ss_pred HcCCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHc----------CCcEEccCCcchHHHHHHHH
Confidence 45667799999999876 88888888764223799999999999888762 12322211111 10
Q ss_pred CCCCcceEEEeccccc---------CCCCHHHHHHHHHhhccCCcEEEEEE
Q 018003 244 FASSSIDAVHAGAAIH---------CWSSPSTGVAEISRVLRPGGVFVGTT 285 (362)
Q Consensus 244 ~~~~~fD~V~~~~vl~---------h~~d~~~~l~~i~r~LkpgG~li~~~ 285 (362)
.....+|+|+-.-.-. |.+++...+++..++|++||++++..
T Consensus 250 t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G 300 (398)
T 1kol_A 250 LGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPG 300 (398)
T ss_dssp HSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECS
T ss_pred hCCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEec
Confidence 1123699998654321 33456678999999999999998653
No 316
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=95.74 E-value=0.041 Score=50.78 Aligned_cols=71 Identities=14% Similarity=0.137 Sum_probs=54.9
Q ss_pred CeEEEEcCccchHHHHHHHhCCC-CEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCC---CCCcceEEEe
Q 018003 179 GNIIDASCGSGLFSRIFAKSGLF-SLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF---ASSSIDAVHA 254 (362)
Q Consensus 179 ~~vLDiGcG~G~~~~~l~~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~---~~~~fD~V~~ 254 (362)
.+++|+-||.|.+...+...|.. ..++++|+++.+++..+.++ ++..++.+|+..+.. +...+|+|+.
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~--------~~~~~~~~Di~~~~~~~~~~~~~D~l~~ 74 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNF--------PHTQLLAKTIEGITLEEFDRLSFDMILM 74 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHC--------TTSCEECSCGGGCCHHHHHHHCCSEEEE
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhc--------cccccccCCHHHccHhHcCcCCcCEEEE
Confidence 48999999999999999998731 36899999999999888873 344577889877641 1125899998
Q ss_pred ccc
Q 018003 255 GAA 257 (362)
Q Consensus 255 ~~v 257 (362)
..-
T Consensus 75 gpP 77 (343)
T 1g55_A 75 SPP 77 (343)
T ss_dssp CCC
T ss_pred cCC
Confidence 644
No 317
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=95.67 E-value=0.048 Score=50.72 Aligned_cols=100 Identities=15% Similarity=0.141 Sum_probs=66.1
Q ss_pred hhcCCCCCCeEEEEcCcc-chHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCC-----CC
Q 018003 171 GYLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-----PF 244 (362)
Q Consensus 171 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~-----p~ 244 (362)
+.....++.+||-+|+|. |.++..+++..-...|+++|.+++.++.+++. ... .++..+-.++ ..
T Consensus 184 ~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~l--------Ga~-~vi~~~~~~~~~~~~~~ 254 (371)
T 1f8f_A 184 NALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQL--------GAT-HVINSKTQDPVAAIKEI 254 (371)
T ss_dssp TTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHH--------TCS-EEEETTTSCHHHHHHHH
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHc--------CCC-EEecCCccCHHHHHHHh
Confidence 445667799999999986 88877777753212699999999999888764 111 1222111111 01
Q ss_pred CCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEE
Q 018003 245 ASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 285 (362)
Q Consensus 245 ~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~ 285 (362)
..+.+|+|+-.-. . ...++...+.|+|||++++..
T Consensus 255 ~~gg~D~vid~~g-----~-~~~~~~~~~~l~~~G~iv~~G 289 (371)
T 1f8f_A 255 TDGGVNFALESTG-----S-PEILKQGVDALGILGKIAVVG 289 (371)
T ss_dssp TTSCEEEEEECSC-----C-HHHHHHHHHTEEEEEEEEECC
T ss_pred cCCCCcEEEECCC-----C-HHHHHHHHHHHhcCCEEEEeC
Confidence 1236999985432 2 346888999999999998754
No 318
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=95.64 E-value=0.06 Score=50.59 Aligned_cols=104 Identities=16% Similarity=0.099 Sum_probs=68.4
Q ss_pred hhcCCCCCCeEEEEcCcc-chHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCC-C-----
Q 018003 171 GYLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-P----- 243 (362)
Q Consensus 171 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~-p----- 243 (362)
+.....++.+||-+|+|. |.++..+++.....+|+++|.+++.++.+++. ....+..+-.+. .
T Consensus 179 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l----------Ga~~i~~~~~~~~~~~~~~ 248 (398)
T 2dph_A 179 VSAGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDA----------GFETIDLRNSAPLRDQIDQ 248 (398)
T ss_dssp HHTTCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTT----------TCEEEETTSSSCHHHHHHH
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHc----------CCcEEcCCCcchHHHHHHH
Confidence 455667899999999986 88888887753223899999999988887652 123332211111 0
Q ss_pred C-CCCcceEEEeccccc---------CCCCHHHHHHHHHhhccCCcEEEEEE
Q 018003 244 F-ASSSIDAVHAGAAIH---------CWSSPSTGVAEISRVLRPGGVFVGTT 285 (362)
Q Consensus 244 ~-~~~~fD~V~~~~vl~---------h~~d~~~~l~~i~r~LkpgG~li~~~ 285 (362)
. ....+|+|+-.-.-. |. ++...+++..+.|++||++++..
T Consensus 249 ~~~g~g~Dvvid~~g~~~~~~~~~~~~~-~~~~~~~~~~~~l~~gG~iv~~G 299 (398)
T 2dph_A 249 ILGKPEVDCGVDAVGFEAHGLGDEANTE-TPNGALNSLFDVVRAGGAIGIPG 299 (398)
T ss_dssp HHSSSCEEEEEECSCTTCBCSGGGTTSB-CTTHHHHHHHHHEEEEEEEECCS
T ss_pred HhCCCCCCEEEECCCCcccccccccccc-ccHHHHHHHHHHHhcCCEEEEec
Confidence 0 122699998654322 11 23457899999999999988653
No 319
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=95.50 E-value=0.01 Score=52.85 Aligned_cols=105 Identities=9% Similarity=-0.029 Sum_probs=80.3
Q ss_pred CCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCC-CC---CCCCcceEEE
Q 018003 178 GGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR-LP---FASSSIDAVH 253 (362)
Q Consensus 178 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~-~p---~~~~~fD~V~ 253 (362)
+..+||+=+|+|.++..+...+ .+++.+|.++..++..+++++. ..++.++..|... +. -+...||+|+
T Consensus 92 ~~~~LDlfaGSGaLgiEaLS~~--d~~vfvE~~~~a~~~L~~Nl~~-----~~~~~V~~~D~~~~L~~l~~~~~~fdLVf 164 (283)
T 2oo3_A 92 LNSTLSYYPGSPYFAINQLRSQ--DRLYLCELHPTEYNFLLKLPHF-----NKKVYVNHTDGVSKLNALLPPPEKRGLIF 164 (283)
T ss_dssp SSSSCCEEECHHHHHHHHSCTT--SEEEEECCSHHHHHHHTTSCCT-----TSCEEEECSCHHHHHHHHCSCTTSCEEEE
T ss_pred CCCceeEeCCcHHHHHHHcCCC--CeEEEEeCCHHHHHHHHHHhCc-----CCcEEEEeCcHHHHHHHhcCCCCCccEEE
Confidence 4578999999999999988855 4999999999999988887654 3679999999643 21 2335699999
Q ss_pred ecccccCCCCHHHHHHHHHh--hccCCcEEEEEEEccC
Q 018003 254 AGAAIHCWSSPSTGVAEISR--VLRPGGVFVGTTYIVD 289 (362)
Q Consensus 254 ~~~vl~h~~d~~~~l~~i~r--~LkpgG~li~~~~~~~ 289 (362)
+---.+.-.+...+++.+.+ .+.|+|++++.-|..+
T Consensus 165 iDPPYe~k~~~~~vl~~L~~~~~r~~~Gi~v~WYPi~~ 202 (283)
T 2oo3_A 165 IDPSYERKEEYKEIPYAIKNAYSKFSTGLYCVWYPVVN 202 (283)
T ss_dssp ECCCCCSTTHHHHHHHHHHHHHHHCTTSEEEEEEEESS
T ss_pred ECCCCCCCcHHHHHHHHHHHhCccCCCeEEEEEEeccc
Confidence 87665543455666766666 5679999999888754
No 320
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=95.43 E-value=0.14 Score=46.72 Aligned_cols=90 Identities=14% Similarity=0.229 Sum_probs=63.2
Q ss_pred CCeEEEEcCccchHHHHHHHhCC-CCEE-EEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC---CCCCcceEE
Q 018003 178 GGNIIDASCGSGLFSRIFAKSGL-FSLV-VALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP---FASSSIDAV 252 (362)
Q Consensus 178 ~~~vLDiGcG~G~~~~~l~~~~~-~~~v-~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p---~~~~~fD~V 252 (362)
..+++|+-||.|.+...+.+.|. ...+ .++|+++.+.+..+.++.. . ++.+|+..+. ++...+|++
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~--------~-~~~~DI~~~~~~~i~~~~~Dil 80 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKE--------E-VQVKNLDSISIKQIESLNCNTW 80 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCC--------C-CBCCCTTTCCHHHHHHTCCCEE
T ss_pred CCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCC--------C-cccCChhhcCHHHhccCCCCEE
Confidence 45899999999999999999874 2356 7999999998888876422 2 5678888764 222368999
Q ss_pred EecccccCC-----------CCHH-HHHHHHHh-hcc
Q 018003 253 HAGAAIHCW-----------SSPS-TGVAEISR-VLR 276 (362)
Q Consensus 253 ~~~~vl~h~-----------~d~~-~~l~~i~r-~Lk 276 (362)
+...--..+ .|+. .++.++.+ +++
T Consensus 81 ~ggpPCQ~fs~S~ag~~~~~~d~r~~L~~~~~r~~i~ 117 (327)
T 3qv2_A 81 FMSPPCQPYNNSIMSKHKDINDPRAKSVLHLYRDILP 117 (327)
T ss_dssp EECCCCTTCSHHHHTTTCTTTCGGGHHHHHHHHTTGG
T ss_pred EecCCccCcccccCCCCCCCccccchhHHHHHHHHHH
Confidence 976443333 3554 45666666 543
No 321
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=95.30 E-value=0.053 Score=51.30 Aligned_cols=66 Identities=8% Similarity=-0.015 Sum_probs=50.3
Q ss_pred CCCCCeEEEEcCccchHHHHHH-HhCC-CCEEEEEeCCHHHHHHHHHHHhhcCCCCC-CCEEEEEecCC
Q 018003 175 PVLGGNIIDASCGSGLFSRIFA-KSGL-FSLVVALDYSENMLKQCYEFVQQESNFPK-ENFLLVRADIS 240 (362)
Q Consensus 175 ~~~~~~vLDiGcG~G~~~~~l~-~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~-~~~~~~~~d~~ 240 (362)
..++..++|+|++.|.++..++ +.++ ..+|+++|+++...+..+++++...|... .++.++..-+.
T Consensus 224 l~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~al~ 292 (409)
T 2py6_A 224 FSDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGCGAG 292 (409)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECSEEC
T ss_pred cCCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEeEEE
Confidence 4578899999999999999887 4443 36999999999999999998876101113 57777765543
No 322
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=95.17 E-value=0.085 Score=48.53 Aligned_cols=94 Identities=14% Similarity=0.138 Sum_probs=65.1
Q ss_pred hcCCCCCCeEEEEcCcc-chHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCCCCcce
Q 018003 172 YLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSID 250 (362)
Q Consensus 172 ~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~~~~fD 250 (362)
.....++.+||-+|+|. |.++..+++.. +.+|+++|.+++.++.+++. ... .++ .+...+ . ..+|
T Consensus 171 ~~~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~l--------Ga~-~v~-~~~~~~--~-~~~D 236 (348)
T 3two_A 171 FSKVTKGTKVGVAGFGGLGSMAVKYAVAM-GAEVSVFARNEHKKQDALSM--------GVK-HFY-TDPKQC--K-EELD 236 (348)
T ss_dssp HTTCCTTCEEEEESCSHHHHHHHHHHHHT-TCEEEEECSSSTTHHHHHHT--------TCS-EEE-SSGGGC--C-SCEE
T ss_pred hcCCCCCCEEEEECCcHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHhc--------CCC-eec-CCHHHH--h-cCCC
Confidence 34667799999999986 77777777763 34999999999988888762 111 122 333222 2 2799
Q ss_pred EEEecccccCCCCHHHHHHHHHhhccCCcEEEEEE
Q 018003 251 AVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 285 (362)
Q Consensus 251 ~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~ 285 (362)
+|+-.-.-. ..+....+.|+|+|+++...
T Consensus 237 ~vid~~g~~------~~~~~~~~~l~~~G~iv~~G 265 (348)
T 3two_A 237 FIISTIPTH------YDLKDYLKLLTYNGDLALVG 265 (348)
T ss_dssp EEEECCCSC------CCHHHHHTTEEEEEEEEECC
T ss_pred EEEECCCcH------HHHHHHHHHHhcCCEEEEEC
Confidence 998543311 24778889999999999764
No 323
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=95.14 E-value=0.11 Score=43.36 Aligned_cols=95 Identities=18% Similarity=0.228 Sum_probs=61.2
Q ss_pred hhcCCCCCCeEEEEcC--ccchHHHHHHH-hCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC----
Q 018003 171 GYLKPVLGGNIIDASC--GSGLFSRIFAK-SGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP---- 243 (362)
Q Consensus 171 ~~l~~~~~~~vLDiGc--G~G~~~~~l~~-~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p---- 243 (362)
+.....++.+||..|+ |.|.....++. .|. +|+++|.+++.++.+++. .... . .|.....
T Consensus 32 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~--~V~~~~~~~~~~~~~~~~--------g~~~-~--~d~~~~~~~~~ 98 (198)
T 1pqw_A 32 EVGRLSPGERVLIHSATGGVGMAAVSIAKMIGA--RIYTTAGSDAKREMLSRL--------GVEY-V--GDSRSVDFADE 98 (198)
T ss_dssp TTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTC--EEEEEESSHHHHHHHHTT--------CCSE-E--EETTCSTHHHH
T ss_pred HHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHc--------CCCE-E--eeCCcHHHHHH
Confidence 3445667899999995 45666555544 454 899999999877766541 1111 1 2332211
Q ss_pred ----CCCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEE
Q 018003 244 ----FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 285 (362)
Q Consensus 244 ----~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~ 285 (362)
...+.+|+|+.+.. ...++...+.|+|||+++...
T Consensus 99 ~~~~~~~~~~D~vi~~~g-------~~~~~~~~~~l~~~G~~v~~g 137 (198)
T 1pqw_A 99 ILELTDGYGVDVVLNSLA-------GEAIQRGVQILAPGGRFIELG 137 (198)
T ss_dssp HHHHTTTCCEEEEEECCC-------THHHHHHHHTEEEEEEEEECS
T ss_pred HHHHhCCCCCeEEEECCc-------hHHHHHHHHHhccCCEEEEEc
Confidence 11236999986543 146888999999999988754
No 324
>1dl6_A Transcription factor II B (TFIIB); zinc ribbon, gene regulation; NMR {Homo sapiens} SCOP: g.41.3.1 PDB: 1rly_A 1ro4_A
Probab=95.08 E-value=0.014 Score=38.79 Aligned_cols=37 Identities=14% Similarity=0.159 Sum_probs=26.3
Q ss_pred ccccCCeeeCCCCCC-CcccccCCCCccccccCCceecCccCccccc
Q 018003 65 ASTSKNVLACPICYK-PLTWIGDSSLSIESAAGSSLQCNTCKKTYSG 110 (362)
Q Consensus 65 ~~~~~~~l~CP~C~~-~l~~~~~~~~~~~~~~~~~l~C~~C~~~~~~ 110 (362)
..+.+..+.||.|++ ++.... ..+.+.|..||.++..
T Consensus 5 ~~~ll~~~~Cp~C~~~~lv~D~---------~~ge~vC~~CGlVl~e 42 (58)
T 1dl6_A 5 RLDALPRVTCPNHPDAILVEDY---------RAGDMICPECGLVVGD 42 (58)
T ss_dssp SCCCCSCCSBTTBSSSCCEECS---------SSCCEECTTTCCEECC
T ss_pred hhhccccccCcCCCCCceeEeC---------CCCeEEeCCCCCEEec
Confidence 445667779999988 443322 3478999999988654
No 325
>3q87_A Putative uncharacterized protein ECU08_1170; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=94.91 E-value=0.0067 Score=46.86 Aligned_cols=28 Identities=21% Similarity=0.450 Sum_probs=24.2
Q ss_pred ccCCceecCccCcccccCCceeeeecCC
Q 018003 94 AAGSSLQCNTCKKTYSGVGTHFDMTAAS 121 (362)
Q Consensus 94 ~~~~~l~C~~C~~~~~~~~g~~~~~~~~ 121 (362)
+.+|.+.|++||+.|++++|+++++..-
T Consensus 95 V~EG~L~Cp~cgr~ypI~~GIPNm~~~~ 122 (125)
T 3q87_A 95 VVEGSLRCDMCGLIYPIKGSIVETVDTV 122 (125)
T ss_dssp EEEEEEEETTTCCEEEEETTEEECSSCB
T ss_pred EEEEEEECCCCCCEeeccCCcccHHHhc
Confidence 4568999999999999999999887653
No 326
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=94.47 E-value=0.18 Score=44.30 Aligned_cols=107 Identities=16% Similarity=0.155 Sum_probs=69.9
Q ss_pred CCeEEEEcCccchHHHHHHHh-------CCCCEEEEEe-----CCHH-------------------HHHHHHHHH-----
Q 018003 178 GGNIIDASCGSGLFSRIFAKS-------GLFSLVVALD-----YSEN-------------------MLKQCYEFV----- 221 (362)
Q Consensus 178 ~~~vLDiGcG~G~~~~~l~~~-------~~~~~v~gvD-----~s~~-------------------~~~~a~~~~----- 221 (362)
.+.|+|+|+-.|..+..++.. ++..+++|+| +.+. ..+..++.+
T Consensus 70 pG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~~ 149 (257)
T 3tos_A 70 PGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHEC 149 (257)
T ss_dssp CSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHHT
T ss_pred CCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHhh
Confidence 569999999999987776542 4567999999 4321 011111111
Q ss_pred -hhcCCCCCCCEEEEEecCCC-CC-----CCCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEc
Q 018003 222 -QQESNFPKENFLLVRADISR-LP-----FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 287 (362)
Q Consensus 222 -~~~~~~~~~~~~~~~~d~~~-~p-----~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~ 287 (362)
+.. +....++.++.+++.+ +| .+.++||+|..-.-. -..-...++.+...|+|||++++-..+
T Consensus 150 ~~~~-g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~--Y~~t~~~le~~~p~l~~GGvIv~DD~~ 219 (257)
T 3tos_A 150 SDFF-GHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDL--YEPTKAVLEAIRPYLTKGSIVAFDELD 219 (257)
T ss_dssp TSTT-TTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCC--HHHHHHHHHHHGGGEEEEEEEEESSTT
T ss_pred hhhc-CCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcc--cchHHHHHHHHHHHhCCCcEEEEcCCC
Confidence 111 1224789999999855 33 245579999976632 122346799999999999999986643
No 327
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=94.46 E-value=0.18 Score=46.06 Aligned_cols=99 Identities=16% Similarity=0.161 Sum_probs=65.8
Q ss_pred hhcCCCCCCeEEEEcCcc-chHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC--C--C
Q 018003 171 GYLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP--F--A 245 (362)
Q Consensus 171 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p--~--~ 245 (362)
+.....++.+||-+|+|. |..+..+++.. +.+|+++|.+++.++.+++. ... ..+..+-.++. . .
T Consensus 160 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~l--------Ga~-~~i~~~~~~~~~~~~~~ 229 (340)
T 3s2e_A 160 KVTDTRPGQWVVISGIGGLGHVAVQYARAM-GLRVAAVDIDDAKLNLARRL--------GAE-VAVNARDTDPAAWLQKE 229 (340)
T ss_dssp HTTTCCTTSEEEEECCSTTHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHT--------TCS-EEEETTTSCHHHHHHHH
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHc--------CCC-EEEeCCCcCHHHHHHHh
Confidence 444667799999999986 88888887763 34999999999998888763 111 12221111110 0 1
Q ss_pred CCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEE
Q 018003 246 SSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 285 (362)
Q Consensus 246 ~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~ 285 (362)
.+.+|+|+.... . ...++...+.|+|+|++++..
T Consensus 230 ~g~~d~vid~~g-----~-~~~~~~~~~~l~~~G~iv~~G 263 (340)
T 3s2e_A 230 IGGAHGVLVTAV-----S-PKAFSQAIGMVRRGGTIALNG 263 (340)
T ss_dssp HSSEEEEEESSC-----C-HHHHHHHHHHEEEEEEEEECS
T ss_pred CCCCCEEEEeCC-----C-HHHHHHHHHHhccCCEEEEeC
Confidence 136888875432 2 346888999999999998753
No 328
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=94.45 E-value=0.11 Score=47.01 Aligned_cols=92 Identities=9% Similarity=0.034 Sum_probs=61.3
Q ss_pred hhcCCCCCCeEEEEcCcc-chHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCCCCcc
Q 018003 171 GYLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSI 249 (362)
Q Consensus 171 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~~~~f 249 (362)
+.....++.+||-+|+|. |.++..+++.. +.+|++++ +++.++.+++. ....+.-|.+.+ .+.+
T Consensus 136 ~~~~~~~g~~VlV~GaG~vG~~a~qlak~~-Ga~Vi~~~-~~~~~~~~~~l----------Ga~~v~~d~~~v---~~g~ 200 (315)
T 3goh_A 136 EKIPLTKQREVLIVGFGAVNNLLTQMLNNA-GYVVDLVS-ASLSQALAAKR----------GVRHLYREPSQV---TQKY 200 (315)
T ss_dssp TTSCCCSCCEEEEECCSHHHHHHHHHHHHH-TCEEEEEC-SSCCHHHHHHH----------TEEEEESSGGGC---CSCE
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEE-ChhhHHHHHHc----------CCCEEEcCHHHh---CCCc
Confidence 556677899999999974 77777777753 24999999 98888888763 122222232222 4679
Q ss_pred eEEEecccccCCCCHHHHHHHHHhhccCCcEEEEE
Q 018003 250 DAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGT 284 (362)
Q Consensus 250 D~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~ 284 (362)
|+|+-.-. .+ .+.+..+.|+|+|+++..
T Consensus 201 Dvv~d~~g-----~~--~~~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 201 FAIFDAVN-----SQ--NAAALVPSLKANGHIICI 228 (315)
T ss_dssp EEEECC--------------TTGGGEEEEEEEEEE
T ss_pred cEEEECCC-----ch--hHHHHHHHhcCCCEEEEE
Confidence 99984322 22 236678999999999876
No 329
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=94.43 E-value=0.085 Score=47.51 Aligned_cols=57 Identities=23% Similarity=0.218 Sum_probs=40.0
Q ss_pred CCEEEEEecCCC-CC-CCCCcceEEEecccccCCC--------------------CHHHHHHHHHhhccCCcEEEEEEE
Q 018003 230 ENFLLVRADISR-LP-FASSSIDAVHAGAAIHCWS--------------------SPSTGVAEISRVLRPGGVFVGTTY 286 (362)
Q Consensus 230 ~~~~~~~~d~~~-~p-~~~~~fD~V~~~~vl~h~~--------------------d~~~~l~~i~r~LkpgG~li~~~~ 286 (362)
.+..++++|..+ ++ +++++||+|+++--..... ....+++++.++|||||.+++...
T Consensus 20 ~~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~ 98 (297)
T 2zig_A 20 GVHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVG 98 (297)
T ss_dssp -CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cCCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEEC
Confidence 467899999865 22 4578999999874432111 123567899999999999998764
No 330
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=94.42 E-value=0.07 Score=48.73 Aligned_cols=61 Identities=11% Similarity=0.044 Sum_probs=50.6
Q ss_pred CcHHHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhc
Q 018003 161 GPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE 224 (362)
Q Consensus 161 ~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~ 224 (362)
.|...++.+.+... .++..|||.=||+|..+.+..+.|. +.+|+|+++...+.+++++...
T Consensus 237 kp~~l~~~~i~~~~-~~~~~VlDpF~GsGtt~~aa~~~gr--~~ig~e~~~~~~~~~~~r~~~~ 297 (323)
T 1boo_A 237 FPAKLPEFFIRMLT-EPDDLVVDIFGGSNTTGLVAERESR--KWISFEMKPEYVAASAFRFLDN 297 (323)
T ss_dssp CCTHHHHHHHHHHC-CTTCEEEETTCTTCHHHHHHHHTTC--EEEEEESCHHHHHHHHGGGSCS
T ss_pred CCHHHHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHHcCC--CEEEEeCCHHHHHHHHHHHHhc
Confidence 34566677776553 4688999999999999999988876 9999999999999999987654
No 331
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=94.38 E-value=0.21 Score=45.45 Aligned_cols=96 Identities=9% Similarity=-0.041 Sum_probs=62.9
Q ss_pred hhcCCCCCCeEEEEcC--ccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCC-CC----
Q 018003 171 GYLKPVLGGNIIDASC--GSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR-LP---- 243 (362)
Q Consensus 171 ~~l~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~-~p---- 243 (362)
+.....++.+||-.|+ |.|..+..+++.. +.+|+++|.+++.++.+++. .... ..|..+ -.
T Consensus 139 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~-G~~V~~~~~~~~~~~~~~~~--------g~~~---~~d~~~~~~~~~~ 206 (333)
T 1v3u_A 139 EVCGVKGGETVLVSAAAGAVGSVVGQIAKLK-GCKVVGAAGSDEKIAYLKQI--------GFDA---AFNYKTVNSLEEA 206 (333)
T ss_dssp TTSCCCSSCEEEEESTTBHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHT--------TCSE---EEETTSCSCHHHH
T ss_pred HhhCCCCCCEEEEecCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhc--------CCcE---EEecCCHHHHHHH
Confidence 4456677899999998 4576666655542 24999999999888877432 1111 123322 11
Q ss_pred ---CCCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEE
Q 018003 244 ---FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 285 (362)
Q Consensus 244 ---~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~ 285 (362)
...+.+|+|+.+..- ..+....+.|++||++++..
T Consensus 207 ~~~~~~~~~d~vi~~~g~-------~~~~~~~~~l~~~G~~v~~g 244 (333)
T 1v3u_A 207 LKKASPDGYDCYFDNVGG-------EFLNTVLSQMKDFGKIAICG 244 (333)
T ss_dssp HHHHCTTCEEEEEESSCH-------HHHHHHHTTEEEEEEEEECC
T ss_pred HHHHhCCCCeEEEECCCh-------HHHHHHHHHHhcCCEEEEEe
Confidence 112469999865541 34788899999999998753
No 332
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=94.32 E-value=0.11 Score=52.55 Aligned_cols=130 Identities=14% Similarity=0.123 Sum_probs=79.5
Q ss_pred CCeEEEEcCccchHHHHHHHhC-------C-----CCEEEEEeC---CHHHHHHHHH-----------HHhhcCC-----
Q 018003 178 GGNIIDASCGSGLFSRIFAKSG-------L-----FSLVVALDY---SENMLKQCYE-----------FVQQESN----- 226 (362)
Q Consensus 178 ~~~vLDiGcG~G~~~~~l~~~~-------~-----~~~v~gvD~---s~~~~~~a~~-----------~~~~~~~----- 226 (362)
.-+|||+|-|+|.+.....+.. | ..+++++|. +++.+..+-+ ..+....
T Consensus 67 ~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 146 (676)
T 3ps9_A 67 LFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGC 146 (676)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSEE
T ss_pred ceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCCc
Confidence 4589999999999766554431 1 135899998 7776664332 1111100
Q ss_pred ------CCCCCEEEEEecCCC-CC-C--C-CCcceEEEecccccCCCCH----HHHHHHHHhhccCCcEEEEEEEccCCC
Q 018003 227 ------FPKENFLLVRADISR-LP-F--A-SSSIDAVHAGAAIHCWSSP----STGVAEISRVLRPGGVFVGTTYIVDGP 291 (362)
Q Consensus 227 ------~~~~~~~~~~~d~~~-~p-~--~-~~~fD~V~~~~vl~h~~d~----~~~l~~i~r~LkpgG~li~~~~~~~~~ 291 (362)
.+...+.++.+|+.+ ++ + . ...||+|+.-.--. -.+| ..+++.+.++++|||.+... .
T Consensus 147 ~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p-~~np~~w~~~~~~~l~~~~~~g~~~~t~--~---- 219 (676)
T 3ps9_A 147 HRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAP-AKNPDMWTQNLFNAMARLARPGGTLATF--T---- 219 (676)
T ss_dssp EEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCG-GGCGGGSCHHHHHHHHHHEEEEEEEEES--C----
T ss_pred eEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCC-cCChhhhhHHHHHHHHHHhCCCCEEEec--c----
Confidence 001234566677643 22 1 1 46799998744211 1234 47899999999999987621 1
Q ss_pred CcchhhhHHHHHhhhhcccccccccccCCHHHHHHHHHHCCCEEEEEEEec
Q 018003 292 FNLIPFSRLLRQVCFLDLKIVGFSIPVLGFDDLKRIFRQFQLVVNLKLFYG 342 (362)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~~Gf~~v~~~~~g 342 (362)
....+++.|.++||.+.+...++
T Consensus 220 ----------------------------~~~~vr~~L~~aGf~v~~~~~~g 242 (676)
T 3ps9_A 220 ----------------------------SAGFVRRGLQDAGFTMQKRKGFG 242 (676)
T ss_dssp ----------------------------CCHHHHHHHHHHTCEEEEEECST
T ss_pred ----------------------------CcHHHHHHHHhCCeEEEeccccc
Confidence 11368889999999877655444
No 333
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=94.30 E-value=0.15 Score=46.83 Aligned_cols=100 Identities=14% Similarity=0.146 Sum_probs=66.6
Q ss_pred hhcCCCCCCeEEEEcCcc-chHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC------
Q 018003 171 GYLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP------ 243 (362)
Q Consensus 171 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p------ 243 (362)
+.....++.+||-+|+|. |.++..+++..-..+|+++|.+++.++.+++. .. ..++..+-.++.
T Consensus 160 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l--------Ga-~~vi~~~~~~~~~~v~~~ 230 (352)
T 3fpc_A 160 ELANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEY--------GA-TDIINYKNGDIVEQILKA 230 (352)
T ss_dssp HHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHH--------TC-CEEECGGGSCHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHh--------CC-ceEEcCCCcCHHHHHHHH
Confidence 556667899999999986 77888877764223799999999988888774 11 112211111110
Q ss_pred CCCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEE
Q 018003 244 FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 285 (362)
Q Consensus 244 ~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~ 285 (362)
.....+|+|+-.-. .+ ..+....+.|+|||+++...
T Consensus 231 t~g~g~D~v~d~~g-----~~-~~~~~~~~~l~~~G~~v~~G 266 (352)
T 3fpc_A 231 TDGKGVDKVVIAGG-----DV-HTFAQAVKMIKPGSDIGNVN 266 (352)
T ss_dssp TTTCCEEEEEECSS-----CT-THHHHHHHHEEEEEEEEECC
T ss_pred cCCCCCCEEEECCC-----Ch-HHHHHHHHHHhcCCEEEEec
Confidence 11236999985332 22 35888999999999998764
No 334
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=94.29 E-value=0.13 Score=52.06 Aligned_cols=131 Identities=17% Similarity=0.163 Sum_probs=80.2
Q ss_pred CCCeEEEEcCccchHHHHHHHhC-------C-----CCEEEEEeC---CHHHHHHHHH-----------HHhhcC-----
Q 018003 177 LGGNIIDASCGSGLFSRIFAKSG-------L-----FSLVVALDY---SENMLKQCYE-----------FVQQES----- 225 (362)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~-------~-----~~~v~gvD~---s~~~~~~a~~-----------~~~~~~----- 225 (362)
+.-+|+|+|.|+|.+...+.+.. | ..+++.+|. +.+.+..+-+ .++...
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAG 137 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSE
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCC
Confidence 34689999999999876665431 1 146899998 4444443221 111110
Q ss_pred ------CCCCCCEEEEEecCCC-CC-CC---CCcceEEEecccccCCCCH----HHHHHHHHhhccCCcEEEEEEEccCC
Q 018003 226 ------NFPKENFLLVRADISR-LP-FA---SSSIDAVHAGAAIHCWSSP----STGVAEISRVLRPGGVFVGTTYIVDG 290 (362)
Q Consensus 226 ------~~~~~~~~~~~~d~~~-~p-~~---~~~fD~V~~~~vl~h~~d~----~~~l~~i~r~LkpgG~li~~~~~~~~ 290 (362)
..+...+.++.+|+.+ ++ +. ++.+|+++.-.---. .+| ..++..+.++++|||.+.- +.
T Consensus 138 ~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~-~np~~w~~~~~~~l~~~~~~g~~~~t--~~--- 211 (689)
T 3pvc_A 138 CHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPA-KNPDMWNEQLFNAMARMTRPGGTFST--FT--- 211 (689)
T ss_dssp EEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC---CCTTCSHHHHHHHHHHEEEEEEEEE--SC---
T ss_pred ceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCC-CChhhhhHHHHHHHHHHhCCCCEEEe--cc---
Confidence 0011256678888743 22 11 467999987442111 123 5789999999999997661 11
Q ss_pred CCcchhhhHHHHHhhhhcccccccccccCCHHHHHHHHHHCCCEEEEEEEec
Q 018003 291 PFNLIPFSRLLRQVCFLDLKIVGFSIPVLGFDDLKRIFRQFQLVVNLKLFYG 342 (362)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~~Gf~~v~~~~~g 342 (362)
....+++.|.++||.+.+...++
T Consensus 212 -----------------------------~~~~vr~~l~~aGf~~~~~~~~~ 234 (689)
T 3pvc_A 212 -----------------------------AAGFVRRGLQQAGFNVTKVKGFG 234 (689)
T ss_dssp -----------------------------CCHHHHHHHHHTTCEEEEEECSS
T ss_pred -----------------------------CcHHHHHHHHhCCeEEEeccCCC
Confidence 11368899999999877655443
No 335
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=94.26 E-value=0.26 Score=46.35 Aligned_cols=98 Identities=14% Similarity=0.061 Sum_probs=63.6
Q ss_pred CCCCCCeEEEEcCcc-chHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC------CCC
Q 018003 174 KPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP------FAS 246 (362)
Q Consensus 174 ~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p------~~~ 246 (362)
...++.+||=+|+|. |.++..+++.....+|+++|.+++.++.+++. ... .++..+-.++. ...
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~l--------Ga~-~vi~~~~~~~~~~i~~~t~g 280 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKEL--------GAD-HVIDPTKENFVEAVLDYTNG 280 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH--------TCS-EEECTTTSCHHHHHHHHTTT
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc--------CCC-EEEcCCCCCHHHHHHHHhCC
Confidence 456789999999875 77777777764223899999999999888764 111 12211111110 112
Q ss_pred CcceEEEecccccCCCCHHHHHHHHHhhc----cCCcEEEEEE
Q 018003 247 SSIDAVHAGAAIHCWSSPSTGVAEISRVL----RPGGVFVGTT 285 (362)
Q Consensus 247 ~~fD~V~~~~vl~h~~d~~~~l~~i~r~L----kpgG~li~~~ 285 (362)
..+|+|+- ....+...+..+.+.| ++||++++..
T Consensus 281 ~g~D~vid-----~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G 318 (404)
T 3ip1_A 281 LGAKLFLE-----ATGVPQLVWPQIEEVIWRARGINATVAIVA 318 (404)
T ss_dssp CCCSEEEE-----CSSCHHHHHHHHHHHHHHCSCCCCEEEECS
T ss_pred CCCCEEEE-----CCCCcHHHHHHHHHHHHhccCCCcEEEEeC
Confidence 36999874 4445544566666666 9999998764
No 336
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=94.25 E-value=0.21 Score=45.75 Aligned_cols=71 Identities=18% Similarity=0.211 Sum_probs=53.5
Q ss_pred CeEEEEcCccchHHHHHHHhCCC-CEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC---CCCCcceEEEe
Q 018003 179 GNIIDASCGSGLFSRIFAKSGLF-SLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP---FASSSIDAVHA 254 (362)
Q Consensus 179 ~~vLDiGcG~G~~~~~l~~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p---~~~~~fD~V~~ 254 (362)
.+++|+-||.|.+...+...|.. ..+.++|+++.+.+..+.+ .+...++.+|+..+. ++...+|+++.
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N--------~~~~~~~~~DI~~~~~~~~~~~~~D~l~g 75 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHN--------FPETNLLNRNIQQLTPQVIKKWNVDTILM 75 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHH--------CTTSCEECCCGGGCCHHHHHHTTCCEEEE
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHh--------CCCCceeccccccCCHHHhccCCCCEEEe
Confidence 37999999999999999988742 3578999999988887776 344456778887764 22336899996
Q ss_pred ccc
Q 018003 255 GAA 257 (362)
Q Consensus 255 ~~v 257 (362)
..-
T Consensus 76 gpP 78 (333)
T 4h0n_A 76 SPP 78 (333)
T ss_dssp CCC
T ss_pred cCC
Confidence 533
No 337
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=94.25 E-value=0.13 Score=47.84 Aligned_cols=94 Identities=17% Similarity=0.172 Sum_probs=62.7
Q ss_pred cCCCCCCeEEEEcCcc-chHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEe---c-CCCCCCCCC
Q 018003 173 LKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRA---D-ISRLPFASS 247 (362)
Q Consensus 173 l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~---d-~~~~p~~~~ 247 (362)
....++.+||-+|+|. |.++..+++.. +.+|+++|.+++.++.+++. . .. .++.. | ...+ . +
T Consensus 190 ~~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~Vi~~~~~~~~~~~a~~l-G-------a~-~vi~~~~~~~~~~~--~-~ 256 (369)
T 1uuf_A 190 WQAGPGKKVGVVGIGGLGHMGIKLAHAM-GAHVVAFTTSEAKREAAKAL-G-------AD-EVVNSRNADEMAAH--L-K 256 (369)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHH-T-------CS-EEEETTCHHHHHTT--T-T
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc-C-------Cc-EEeccccHHHHHHh--h-c
Confidence 4566799999999985 77777777653 34899999999988888763 1 11 12211 1 1111 1 4
Q ss_pred cceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEE
Q 018003 248 SIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 285 (362)
Q Consensus 248 ~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~ 285 (362)
.+|+|+-.-.-. ..++...+.|+|+|+++...
T Consensus 257 g~Dvvid~~g~~------~~~~~~~~~l~~~G~iv~~G 288 (369)
T 1uuf_A 257 SFDFILNTVAAP------HNLDDFTTLLKRDGTMTLVG 288 (369)
T ss_dssp CEEEEEECCSSC------CCHHHHHTTEEEEEEEEECC
T ss_pred CCCEEEECCCCH------HHHHHHHHHhccCCEEEEec
Confidence 699998543321 23677889999999988653
No 338
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=94.22 E-value=0.099 Score=48.81 Aligned_cols=71 Identities=24% Similarity=0.263 Sum_probs=56.0
Q ss_pred CeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCC--------CCCcce
Q 018003 179 GNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF--------ASSSID 250 (362)
Q Consensus 179 ~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~--------~~~~fD 250 (362)
.+++|+-||.|.++..+...|. ..+.++|+++.+++..+.+ .++..++++|+.++.. ..+.+|
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~-~~v~avE~d~~a~~t~~~N--------~~~~~~~~~DI~~~~~~~~~~~~~~~~~~D 73 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGF-DVKMAVEIDQHAINTHAIN--------FPRSLHVQEDVSLLNAEIIKGFFKNDMPID 73 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTC-EEEEEECSCHHHHHHHHHH--------CTTSEEECCCGGGCCHHHHHHHHCSCCCCC
T ss_pred CeEEEEccCcCHHHHHHHHCCC-cEEEEEeCCHHHHHHHHHh--------CCCCceEecChhhcCHHHHHhhcccCCCee
Confidence 4899999999999999999885 3567999999988887775 4566788899877631 245799
Q ss_pred EEEecccc
Q 018003 251 AVHAGAAI 258 (362)
Q Consensus 251 ~V~~~~vl 258 (362)
+|+...--
T Consensus 74 ~i~ggpPC 81 (376)
T 3g7u_A 74 GIIGGPPC 81 (376)
T ss_dssp EEEECCCC
T ss_pred EEEecCCC
Confidence 99976543
No 339
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=94.22 E-value=0.38 Score=43.99 Aligned_cols=100 Identities=14% Similarity=0.119 Sum_probs=62.2
Q ss_pred hhcCCCCCCeEEEEcCcc-chHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC------
Q 018003 171 GYLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP------ 243 (362)
Q Consensus 171 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p------ 243 (362)
+.....++.+||=+|+|. |.++..+++.....+|+++|.+++-++.+++. .....+...-.+..
T Consensus 157 ~~~~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~---------Ga~~~i~~~~~~~~~~v~~~ 227 (348)
T 4eez_A 157 KVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKI---------GADVTINSGDVNPVDEIKKI 227 (348)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHT---------TCSEEEEC-CCCHHHHHHHH
T ss_pred cccCCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhc---------CCeEEEeCCCCCHHHHhhhh
Confidence 344567799999999987 44555555543346999999999988887763 11112221111110
Q ss_pred CCCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEE
Q 018003 244 FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 285 (362)
Q Consensus 244 ~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~ 285 (362)
.....+|.++...+ -...+....+.|+++|++++..
T Consensus 228 t~g~g~d~~~~~~~------~~~~~~~~~~~l~~~G~~v~~g 263 (348)
T 4eez_A 228 TGGLGVQSAIVCAV------ARIAFEQAVASLKPMGKMVAVA 263 (348)
T ss_dssp TTSSCEEEEEECCS------CHHHHHHHHHTEEEEEEEEECC
T ss_pred cCCCCceEEEEecc------CcchhheeheeecCCceEEEEe
Confidence 11234666664322 2356888899999999988754
No 340
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=94.16 E-value=1 Score=45.45 Aligned_cols=160 Identities=11% Similarity=0.152 Sum_probs=92.4
Q ss_pred CCCeEEEEcCccchHHHHHHHhCC--------CCEEEEEeCCHHHHHHHHHHHhhcC------------CCC--------
Q 018003 177 LGGNIIDASCGSGLFSRIFAKSGL--------FSLVVALDYSENMLKQCYEFVQQES------------NFP-------- 228 (362)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~--------~~~v~gvD~s~~~~~~a~~~~~~~~------------~~~-------- 228 (362)
+...|+-+|||.=.....+....+ ...++=+|. ++.++.=++.+.... ...
T Consensus 107 ~~~qvV~LGaGlDtr~~Rl~~~~~~~~~~~~~~~~~~EvD~-p~v~~~K~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~ 185 (695)
T 2zwa_A 107 KKIVVVNLGCGYDPLPFQLLDTNNIQSQQYHDRVSFIDIDY-SDLLKIKIELIKTIPELSKIIGLSEDKDYVDDSNVDFL 185 (695)
T ss_dssp SEEEEEEETCTTCCHHHHHHCTTCGGGGGGSSSEEEEEEEC-HHHHHHHHHHHHHCHHHHHHTTCCSSCSSCSCTTCCCE
T ss_pred CCcEEEEcccccCcceeeeeccCcccccccCCCCEEEECcc-HHHHHHHHHHHHcChHHHHhhccccccccccccccccc
Confidence 356899999999888777765522 345556665 334443334443210 000
Q ss_pred -CCCEEEEEecCCCCC----------C-CCCcceEEEecccccCCCCH--HHHHHHHHhhccCCcEEEEEEEccCCCCcc
Q 018003 229 -KENFLLVRADISRLP----------F-ASSSIDAVHAGAAIHCWSSP--STGVAEISRVLRPGGVFVGTTYIVDGPFNL 294 (362)
Q Consensus 229 -~~~~~~~~~d~~~~p----------~-~~~~fD~V~~~~vl~h~~d~--~~~l~~i~r~LkpgG~li~~~~~~~~~~~~ 294 (362)
..+..++.+|+.+.. + .....=++++-.+|.+++.. .++|+.+.+. |+|.+++.+...... ..
T Consensus 186 ~s~~y~~v~~Dl~~~~~~~~~l~~~g~~d~~~ptl~i~Egvl~Yl~~~~~~~ll~~~~~~--~~~~~~~~e~~~~~~-~~ 262 (695)
T 2zwa_A 186 TTPKYLARPCDLNDSKMFSTLLNECQLYDPNVVKVFVAEVSLAYMKPERSDSIIEATSKM--ENSHFIILEQLIPKG-PF 262 (695)
T ss_dssp ECSSEEEEECCTTCHHHHHHHHHHTTTTCTTEEEEEEEESSGGGSCHHHHHHHHHHHHTS--SSEEEEEEEECCTTC-TT
T ss_pred cCCCeeEEeCcCCCcHHHHHHHhhccCCCCCCCEEEeeeeEEEEcCHHHHHHHHHHHhhC--CCceEEEEEeecCCC-CC
Confidence 137889999998741 1 23334467777888888533 3678877754 677777766543211 12
Q ss_pred hhhhHHHHHhhh-hcccccccccccCCHHHHHHHHHHCCCEEEEEEEe
Q 018003 295 IPFSRLLRQVCF-LDLKIVGFSIPVLGFDDLKRIFRQFQLVVNLKLFY 341 (362)
Q Consensus 295 ~~~~~~~~~~~~-~~~~~~~~~~~~~s~~~l~~ll~~~Gf~~v~~~~~ 341 (362)
.++.......+. ....... -..+.+.++..+.|.++||..+....+
T Consensus 263 d~f~~~m~~~~~~~g~~l~~-~~~~~~~~~~~~~~~~~Gw~~v~~~~~ 309 (695)
T 2zwa_A 263 EPFSKQMLAHFKRNDSPLQS-VLKYNTIESQVQRFNKLGFAYVNVGDM 309 (695)
T ss_dssp SHHHHHHHHHHHHTTCCCCG-GGTCCSHHHHHHHHHHTTCCEEEEEEH
T ss_pred ChHHHHHHHHHHHcCCCCCc-cccCCCHHHHHHHHHHCCCCCcceeeH
Confidence 222222222211 0011222 345678999999999999987665543
No 341
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=94.15 E-value=0.23 Score=46.23 Aligned_cols=103 Identities=16% Similarity=0.100 Sum_probs=66.7
Q ss_pred HHhhcCCCCCCeEEEEcCcc-chHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEec--CCCC---
Q 018003 169 MKGYLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRAD--ISRL--- 242 (362)
Q Consensus 169 l~~~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d--~~~~--- 242 (362)
+.+.....++.+||-+|+|. |.++..+++..-..+|+++|.+++.++.+++. .-...+... -..+
T Consensus 185 l~~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~l---------Ga~~vi~~~~~~~~~~~~ 255 (378)
T 3uko_A 185 VWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKF---------GVNEFVNPKDHDKPIQEV 255 (378)
T ss_dssp HHTTTCCCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTT---------TCCEEECGGGCSSCHHHH
T ss_pred HHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHc---------CCcEEEccccCchhHHHH
Confidence 34555667899999999975 77777777763223799999999988888752 111122111 1111
Q ss_pred --CCCCCcceEEEecccccCCCCHHHHHHHHHhhccCC-cEEEEEEE
Q 018003 243 --PFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPG-GVFVGTTY 286 (362)
Q Consensus 243 --p~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~Lkpg-G~li~~~~ 286 (362)
....+.+|+|+-.- ..+ ..++...+.|++| |++++...
T Consensus 256 i~~~~~gg~D~vid~~-----g~~-~~~~~~~~~l~~g~G~iv~~G~ 296 (378)
T 3uko_A 256 IVDLTDGGVDYSFECI-----GNV-SVMRAALECCHKGWGTSVIVGV 296 (378)
T ss_dssp HHHHTTSCBSEEEECS-----CCH-HHHHHHHHTBCTTTCEEEECSC
T ss_pred HHHhcCCCCCEEEECC-----CCH-HHHHHHHHHhhccCCEEEEEcc
Confidence 01234799998532 333 4588899999997 99887643
No 342
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=94.12 E-value=0.37 Score=44.50 Aligned_cols=99 Identities=14% Similarity=0.136 Sum_probs=66.4
Q ss_pred hhcCCCCCCeEEEEcCcc-chHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC------
Q 018003 171 GYLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP------ 243 (362)
Q Consensus 171 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p------ 243 (362)
+.....++.+||-+|+|. |..+..+++.. +.+|+++|.+++.++.+++. ... ..+..+..++.
T Consensus 183 ~~~~~~~g~~VlV~G~G~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~l--------Ga~-~vi~~~~~~~~~~v~~~ 252 (363)
T 3uog_A 183 EKGHLRAGDRVVVQGTGGVALFGLQIAKAT-GAEVIVTSSSREKLDRAFAL--------GAD-HGINRLEEDWVERVYAL 252 (363)
T ss_dssp TTTCCCTTCEEEEESSBHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHH--------TCS-EEEETTTSCHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEecCchhHHHHHHc--------CCC-EEEcCCcccHHHHHHHH
Confidence 455667899999999886 77777777753 35999999999988888764 111 12222211111
Q ss_pred CCCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEE
Q 018003 244 FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 286 (362)
Q Consensus 244 ~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~ 286 (362)
.....+|+|+-.-. ...+....+.|+|||++++...
T Consensus 253 ~~g~g~D~vid~~g-------~~~~~~~~~~l~~~G~iv~~G~ 288 (363)
T 3uog_A 253 TGDRGADHILEIAG-------GAGLGQSLKAVAPDGRISVIGV 288 (363)
T ss_dssp HTTCCEEEEEEETT-------SSCHHHHHHHEEEEEEEEEECC
T ss_pred hCCCCceEEEECCC-------hHHHHHHHHHhhcCCEEEEEec
Confidence 11236999986543 1247778899999999987743
No 343
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=94.09 E-value=0.27 Score=45.30 Aligned_cols=100 Identities=17% Similarity=0.183 Sum_probs=65.3
Q ss_pred hhcCCCCCCeEEEEcCcc-chHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEec---CCC----C
Q 018003 171 GYLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRAD---ISR----L 242 (362)
Q Consensus 171 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d---~~~----~ 242 (362)
+.....++.+||-+|+|. |.++..+++.....+|+++|.+++.++.+++. ... ..+..+ ..+ +
T Consensus 165 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l--------Ga~-~vi~~~~~~~~~~~~~i 235 (356)
T 1pl8_A 165 RRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEI--------GAD-LVLQISKESPQEIARKV 235 (356)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT--------TCS-EEEECSSCCHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh--------CCC-EEEcCcccccchHHHHH
Confidence 344667799999999986 88888887764223899999999988888752 111 222211 000 0
Q ss_pred -CCCCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEE
Q 018003 243 -PFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 285 (362)
Q Consensus 243 -p~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~ 285 (362)
....+.+|+|+-.- ..+ ..+....++|+|||+++...
T Consensus 236 ~~~~~~g~D~vid~~-----g~~-~~~~~~~~~l~~~G~iv~~G 273 (356)
T 1pl8_A 236 EGQLGCKPEVTIECT-----GAE-ASIQAGIYATRSGGTLVLVG 273 (356)
T ss_dssp HHHHTSCCSEEEECS-----CCH-HHHHHHHHHSCTTCEEEECS
T ss_pred HHHhCCCCCEEEECC-----CCh-HHHHHHHHHhcCCCEEEEEe
Confidence 00014689998533 232 45788899999999998754
No 344
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=93.99 E-value=0.12 Score=47.05 Aligned_cols=61 Identities=21% Similarity=0.342 Sum_probs=49.6
Q ss_pred CcHHHHHHHHhhcCCCCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCH---HHHHHHHHHHhhc
Q 018003 161 GPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSE---NMLKQCYEFVQQE 224 (362)
Q Consensus 161 ~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~---~~~~~a~~~~~~~ 224 (362)
.|...++.+..... .++..|||.=||+|..+.+..+.+. +.+|+|+++ ..++.+++++...
T Consensus 227 kp~~l~~~~i~~~~-~~~~~vlDpF~GsGtt~~aa~~~~r--~~ig~e~~~~~~~~~~~~~~Rl~~~ 290 (319)
T 1eg2_A 227 KPAAVIERLVRALS-HPGSTVLDFFAGSGVTARVAIQEGR--NSICTDAAPVFKEYYQKQLTFLQDD 290 (319)
T ss_dssp CCHHHHHHHHHHHS-CTTCEEEETTCTTCHHHHHHHHHTC--EEEEEESSTHHHHHHHHHHHHC---
T ss_pred CCHHHHHHHHHHhC-CCCCEEEecCCCCCHHHHHHHHcCC--cEEEEECCccHHHHHHHHHHHHHHc
Confidence 45667777776654 4688999999999999999998886 999999999 9999999986554
No 345
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=93.84 E-value=0.36 Score=44.59 Aligned_cols=91 Identities=18% Similarity=0.189 Sum_probs=61.8
Q ss_pred CCCeEEEEc-Ccc-chHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCC-C-----CCCCCc
Q 018003 177 LGGNIIDAS-CGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR-L-----PFASSS 248 (362)
Q Consensus 177 ~~~~vLDiG-cG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~-~-----p~~~~~ 248 (362)
++.+||-+| +|. |.++..+++.....+|+++|.+++.++.+++. ... .++ |..+ + ....+.
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~l--------Gad-~vi--~~~~~~~~~v~~~~~~g 239 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSL--------GAH-HVI--DHSKPLAAEVAALGLGA 239 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHT--------TCS-EEE--CTTSCHHHHHHTTCSCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHc--------CCC-EEE--eCCCCHHHHHHHhcCCC
Confidence 688999998 554 88888888862235999999999988888762 111 111 1111 1 112357
Q ss_pred ceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEE
Q 018003 249 IDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGT 284 (362)
Q Consensus 249 fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~ 284 (362)
+|+|+-.-. -...+.++.+.|+++|++++.
T Consensus 240 ~Dvvid~~g------~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 240 PAFVFSTTH------TDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp EEEEEECSC------HHHHHHHHHHHSCTTCEEEEC
T ss_pred ceEEEECCC------chhhHHHHHHHhcCCCEEEEE
Confidence 998875322 234688899999999999876
No 346
>3j20_Y 30S ribosomal protein S27AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=93.79 E-value=0.031 Score=35.87 Aligned_cols=30 Identities=23% Similarity=0.393 Sum_probs=21.0
Q ss_pred eeeCCCCCCCcccccCCCCccccccCCceecCccCcccc
Q 018003 71 VLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYS 109 (362)
Q Consensus 71 ~l~CP~C~~~l~~~~~~~~~~~~~~~~~l~C~~C~~~~~ 109 (362)
.--||.||+...... ....+.|+.||.++-
T Consensus 19 ~k~CP~CG~~~fm~~---------~~~R~~C~kCG~t~~ 48 (50)
T 3j20_Y 19 NKFCPRCGPGVFMAD---------HGDRWACGKCGYTEW 48 (50)
T ss_dssp SEECSSSCSSCEEEE---------CSSEEECSSSCCEEE
T ss_pred cccCCCCCCceEEec---------CCCeEECCCCCCEEE
Confidence 344999998654332 126899999998754
No 347
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=93.76 E-value=0.59 Score=42.84 Aligned_cols=99 Identities=16% Similarity=0.133 Sum_probs=64.6
Q ss_pred hhcCCCCCCeEEEEcCcc-chHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecC-CCCC-----
Q 018003 171 GYLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADI-SRLP----- 243 (362)
Q Consensus 171 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~-~~~p----- 243 (362)
+.....++.+||-+|+|. |.++..+++.. +.+|+++|.+++.++.+++. ... ..+..+- .+..
T Consensus 162 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~l--------Ga~-~~~~~~~~~~~~~~i~~ 231 (352)
T 1e3j_A 162 RRAGVQLGTTVLVIGAGPIGLVSVLAAKAY-GAFVVCTARSPRRLEVAKNC--------GAD-VTLVVDPAKEEESSIIE 231 (352)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHT--------TCS-EEEECCTTTSCHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHh--------CCC-EEEcCcccccHHHHHHH
Confidence 344566789999999875 77777777653 34799999999988888752 111 2222110 1110
Q ss_pred -CC---CCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEE
Q 018003 244 -FA---SSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 285 (362)
Q Consensus 244 -~~---~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~ 285 (362)
.. .+.+|+|+..-. . ...++...++|+|+|+++...
T Consensus 232 ~~~~~~g~g~D~vid~~g-----~-~~~~~~~~~~l~~~G~iv~~G 271 (352)
T 1e3j_A 232 RIRSAIGDLPNVTIDCSG-----N-EKCITIGINITRTGGTLMLVG 271 (352)
T ss_dssp HHHHHSSSCCSEEEECSC-----C-HHHHHHHHHHSCTTCEEEECS
T ss_pred HhccccCCCCCEEEECCC-----C-HHHHHHHHHHHhcCCEEEEEe
Confidence 01 246999985432 2 245788899999999998754
No 348
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=93.72 E-value=0.44 Score=44.15 Aligned_cols=101 Identities=16% Similarity=0.148 Sum_probs=67.0
Q ss_pred hhcCCCCCCeEEEEcCcc-chHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCC-------
Q 018003 171 GYLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL------- 242 (362)
Q Consensus 171 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~------- 242 (362)
+.....++.+||-+|+|. |.++..+++..-...|+++|.+++.++.+++. ... ..+...-.++
T Consensus 176 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l--------Ga~-~vi~~~~~~~~~~i~~~ 246 (370)
T 4ej6_A 176 DLSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEV--------GAT-ATVDPSAGDVVEAIAGP 246 (370)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH--------TCS-EEECTTSSCHHHHHHST
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc--------CCC-EEECCCCcCHHHHHHhh
Confidence 445667799999999976 77777777764223899999999988888774 111 1111111110
Q ss_pred -CCCCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEE
Q 018003 243 -PFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 286 (362)
Q Consensus 243 -p~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~ 286 (362)
....+.+|+|+-.- .. ...++...+.|++||++++...
T Consensus 247 ~~~~~gg~Dvvid~~-----G~-~~~~~~~~~~l~~~G~vv~~G~ 285 (370)
T 4ej6_A 247 VGLVPGGVDVVIECA-----GV-AETVKQSTRLAKAGGTVVILGV 285 (370)
T ss_dssp TSSSTTCEEEEEECS-----CC-HHHHHHHHHHEEEEEEEEECSC
T ss_pred hhccCCCCCEEEECC-----CC-HHHHHHHHHHhccCCEEEEEec
Confidence 02234799998532 22 3468889999999999987643
No 349
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=93.71 E-value=0.29 Score=45.63 Aligned_cols=76 Identities=9% Similarity=0.043 Sum_probs=51.4
Q ss_pred CCeEEEEcCccchHHHHHHHh-------CCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCCCCcce
Q 018003 178 GGNIIDASCGSGLFSRIFAKS-------GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSID 250 (362)
Q Consensus 178 ~~~vLDiGcG~G~~~~~l~~~-------~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~~~~fD 250 (362)
.-.|+|+|+|.|.++..+.+. ....+++.||+|+...+.-++++... .++.+. .++.++| ++ .-
T Consensus 81 ~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~~-----~~v~W~-~~l~~lp--~~-~~ 151 (387)
T 1zkd_A 81 TLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLAGI-----RNIHWH-DSFEDVP--EG-PA 151 (387)
T ss_dssp SEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHSTTC-----SSEEEE-SSGGGSC--CS-SE
T ss_pred CcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhcCC-----CCeEEe-CChhhcC--CC-Ce
Confidence 457999999999998777543 12348999999998887666655443 256654 3444554 22 45
Q ss_pred EEEecccccCCC
Q 018003 251 AVHAGAAIHCWS 262 (362)
Q Consensus 251 ~V~~~~vl~h~~ 262 (362)
+|+++.++..+|
T Consensus 152 ~viANE~fDAlP 163 (387)
T 1zkd_A 152 VILANEYFDVLP 163 (387)
T ss_dssp EEEEESSGGGSC
T ss_pred EEEeccccccCc
Confidence 778888776664
No 350
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=93.69 E-value=0.38 Score=44.55 Aligned_cols=102 Identities=13% Similarity=0.066 Sum_probs=65.5
Q ss_pred HHhhcCCCCCCeEEEEcCcc-chHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecC--CCC---
Q 018003 169 MKGYLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADI--SRL--- 242 (362)
Q Consensus 169 l~~~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~--~~~--- 242 (362)
+.+.....++.+||-+|+|. |.++..+++..-..+|+++|.+++.++.+++. ... .++..+- .++
T Consensus 183 l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l--------Ga~-~vi~~~~~~~~~~~~ 253 (373)
T 1p0f_A 183 AVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIEL--------GAT-ECLNPKDYDKPIYEV 253 (373)
T ss_dssp HHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHT--------TCS-EEECGGGCSSCHHHH
T ss_pred HHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHc--------CCc-EEEecccccchHHHH
Confidence 33445567789999999875 77777777753223799999999988888752 111 1221110 111
Q ss_pred --CCCCCcceEEEecccccCCCCHHHHHHHHHhhccCC-cEEEEEE
Q 018003 243 --PFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPG-GVFVGTT 285 (362)
Q Consensus 243 --p~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~Lkpg-G~li~~~ 285 (362)
....+.+|+|+-.- .. ...++...++|+++ |+++...
T Consensus 254 i~~~t~gg~Dvvid~~-----g~-~~~~~~~~~~l~~~~G~iv~~G 293 (373)
T 1p0f_A 254 ICEKTNGGVDYAVECA-----GR-IETMMNALQSTYCGSGVTVVLG 293 (373)
T ss_dssp HHHHTTSCBSEEEECS-----CC-HHHHHHHHHTBCTTTCEEEECC
T ss_pred HHHHhCCCCCEEEECC-----CC-HHHHHHHHHHHhcCCCEEEEEc
Confidence 01123699998433 22 34588899999999 9988754
No 351
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=93.66 E-value=0.27 Score=44.77 Aligned_cols=100 Identities=11% Similarity=0.013 Sum_probs=65.6
Q ss_pred HHHhhcCCCCCCeEEEEcC--ccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC--
Q 018003 168 LMKGYLKPVLGGNIIDASC--GSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-- 243 (362)
Q Consensus 168 ~l~~~l~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p-- 243 (362)
.+.+.....++.+||-.|+ |.|..+..+++.. +.+|++++.+++.++.+.+.+ ... ..+ |.....
T Consensus 140 al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~~-------g~~-~~~--~~~~~~~~ 208 (336)
T 4b7c_A 140 ALLDVGQPKNGETVVISGAAGAVGSVAGQIARLK-GCRVVGIAGGAEKCRFLVEEL-------GFD-GAI--DYKNEDLA 208 (336)
T ss_dssp HHHHTTCCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTT-------CCS-EEE--ETTTSCHH
T ss_pred HHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHc-------CCC-EEE--ECCCHHHH
Confidence 3435566778999999998 4577777766653 349999999998888773321 111 112 222111
Q ss_pred -----CCCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEE
Q 018003 244 -----FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 285 (362)
Q Consensus 244 -----~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~ 285 (362)
...+.+|+|+.+-. ...+....+.|++||++++..
T Consensus 209 ~~~~~~~~~~~d~vi~~~g-------~~~~~~~~~~l~~~G~iv~~G 248 (336)
T 4b7c_A 209 AGLKRECPKGIDVFFDNVG-------GEILDTVLTRIAFKARIVLCG 248 (336)
T ss_dssp HHHHHHCTTCEEEEEESSC-------HHHHHHHHTTEEEEEEEEECC
T ss_pred HHHHHhcCCCceEEEECCC-------cchHHHHHHHHhhCCEEEEEe
Confidence 11346999986443 136888999999999998754
No 352
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=93.55 E-value=0.53 Score=43.59 Aligned_cols=101 Identities=15% Similarity=0.101 Sum_probs=65.0
Q ss_pred HhhcCCCCCCeEEEEcCcc-chHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecC--CCCC---
Q 018003 170 KGYLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADI--SRLP--- 243 (362)
Q Consensus 170 ~~~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~--~~~p--- 243 (362)
.+.....++.+||-+|+|. |.++..+++..-..+|+++|.+++.++.+++. .--..+...- ..+.
T Consensus 185 ~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l---------Ga~~vi~~~~~~~~~~~~~ 255 (374)
T 1cdo_A 185 VNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVF---------GATDFVNPNDHSEPISQVL 255 (374)
T ss_dssp HTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT---------TCCEEECGGGCSSCHHHHH
T ss_pred HhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHh---------CCceEEeccccchhHHHHH
Confidence 3445566789999999875 77777777764222799999999988888752 1111221110 1110
Q ss_pred --CCCCcceEEEecccccCCCCHHHHHHHHHhhccCC-cEEEEEE
Q 018003 244 --FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPG-GVFVGTT 285 (362)
Q Consensus 244 --~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~Lkpg-G~li~~~ 285 (362)
...+.+|+|+-.- .. ...++...++|++| |++++..
T Consensus 256 ~~~~~~g~D~vid~~-----g~-~~~~~~~~~~l~~~~G~iv~~G 294 (374)
T 1cdo_A 256 SKMTNGGVDFSLECV-----GN-VGVMRNALESCLKGWGVSVLVG 294 (374)
T ss_dssp HHHHTSCBSEEEECS-----CC-HHHHHHHHHTBCTTTCEEEECS
T ss_pred HHHhCCCCCEEEECC-----CC-HHHHHHHHHHhhcCCcEEEEEc
Confidence 1123689988533 22 34588899999999 9988753
No 353
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=93.52 E-value=0.84 Score=41.59 Aligned_cols=68 Identities=19% Similarity=0.193 Sum_probs=51.8
Q ss_pred CCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCC-CCcceEEEecc
Q 018003 178 GGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA-SSSIDAVHAGA 256 (362)
Q Consensus 178 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~-~~~fD~V~~~~ 256 (362)
+.+++|+-||.|.+...+...|. ..+.++|+++.+++..+.++... . .+|+..+... -..+|+|+...
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG~-~~v~~~e~d~~a~~t~~~N~~~~--------~--~~Di~~~~~~~~~~~D~l~~gp 79 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCGA-ECVYSNEWDKYAQEVYEMNFGEK--------P--EGDITQVNEKTIPDHDILCAGF 79 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTC-EEEEEECCCHHHHHHHHHHHSCC--------C--BSCGGGSCGGGSCCCSEEEEEC
T ss_pred CCcEEEECCCcCHHHHHHHHCCC-eEEEEEeCCHHHHHHHHHHcCCC--------C--cCCHHHcCHhhCCCCCEEEECC
Confidence 46899999999999999999885 45889999999999888875432 1 5787665321 13589999763
No 354
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=93.52 E-value=0.53 Score=43.57 Aligned_cols=101 Identities=13% Similarity=0.081 Sum_probs=64.9
Q ss_pred HhhcCCCCCCeEEEEcCcc-chHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecC--CCCC---
Q 018003 170 KGYLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADI--SRLP--- 243 (362)
Q Consensus 170 ~~~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~--~~~p--- 243 (362)
.+.....++.+||-+|+|. |.++..+++..-..+|+++|.+++.++.+++. ... ..+..+- .++.
T Consensus 184 ~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l--------Ga~-~vi~~~~~~~~~~~~~ 254 (374)
T 2jhf_A 184 VKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEV--------GAT-ECVNPQDYKKPIQEVL 254 (374)
T ss_dssp HTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT--------TCS-EEECGGGCSSCHHHHH
T ss_pred HhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh--------CCc-eEecccccchhHHHHH
Confidence 3445566789999999876 77777777764222799999999988888752 111 1221110 1110
Q ss_pred --CCCCcceEEEecccccCCCCHHHHHHHHHhhccCC-cEEEEEE
Q 018003 244 --FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPG-GVFVGTT 285 (362)
Q Consensus 244 --~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~Lkpg-G~li~~~ 285 (362)
...+.+|+|+-.- .. ...+....++|+++ |++++..
T Consensus 255 ~~~~~~g~D~vid~~-----g~-~~~~~~~~~~l~~~~G~iv~~G 293 (374)
T 2jhf_A 255 TEMSNGGVDFSFEVI-----GR-LDTMVTALSCCQEAYGVSVIVG 293 (374)
T ss_dssp HHHTTSCBSEEEECS-----CC-HHHHHHHHHHBCTTTCEEEECS
T ss_pred HHHhCCCCcEEEECC-----CC-HHHHHHHHHHhhcCCcEEEEec
Confidence 1123699987433 22 24588899999999 9988653
No 355
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=93.46 E-value=0.53 Score=43.58 Aligned_cols=102 Identities=14% Similarity=0.077 Sum_probs=65.5
Q ss_pred HHhhcCCCCCCeEEEEcCcc-chHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecC--CCCC--
Q 018003 169 MKGYLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADI--SRLP-- 243 (362)
Q Consensus 169 l~~~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~--~~~p-- 243 (362)
+.+.....++.+||-+|+|. |.++..+++..-..+|+++|.+++.++.+++. ... ..+..+- .++.
T Consensus 187 l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l--------Ga~-~vi~~~~~~~~~~~~ 257 (376)
T 1e3i_A 187 AINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKAL--------GAT-DCLNPRELDKPVQDV 257 (376)
T ss_dssp HHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT--------TCS-EEECGGGCSSCHHHH
T ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh--------CCc-EEEccccccchHHHH
Confidence 33445667789999999875 77777777764223799999999988888752 111 1221110 1110
Q ss_pred ---CCCCcceEEEecccccCCCCHHHHHHHHHhhccCC-cEEEEEE
Q 018003 244 ---FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPG-GVFVGTT 285 (362)
Q Consensus 244 ---~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~Lkpg-G~li~~~ 285 (362)
...+.+|+|+-.- .. ...++...+.|++| |++++..
T Consensus 258 v~~~~~~g~Dvvid~~-----G~-~~~~~~~~~~l~~~~G~iv~~G 297 (376)
T 1e3i_A 258 ITELTAGGVDYSLDCA-----GT-AQTLKAAVDCTVLGWGSCTVVG 297 (376)
T ss_dssp HHHHHTSCBSEEEESS-----CC-HHHHHHHHHTBCTTTCEEEECC
T ss_pred HHHHhCCCccEEEECC-----CC-HHHHHHHHHHhhcCCCEEEEEC
Confidence 1123689987432 22 34688899999999 9988754
No 356
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=93.34 E-value=0.88 Score=41.83 Aligned_cols=101 Identities=18% Similarity=0.146 Sum_probs=67.4
Q ss_pred hhcCCCCCCeEEEEcCcc-chHHHHHHHhCCCCE-EEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCC---CC---
Q 018003 171 GYLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSL-VVALDYSENMLKQCYEFVQQESNFPKENFLLVRADIS---RL--- 242 (362)
Q Consensus 171 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~-v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~---~~--- 242 (362)
+.....+|.+||-+|+|. |.++..+++.. +.+ |+++|.+++.++.+++. ... -+.+. .+.. ++
T Consensus 173 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~l-~~~------~~~~~-~~~~~~~~~~~~ 243 (363)
T 3m6i_A 173 QRAGVRLGDPVLICGAGPIGLITMLCAKAA-GACPLVITDIDEGRLKFAKEI-CPE------VVTHK-VERLSAEESAKK 243 (363)
T ss_dssp HHHTCCTTCCEEEECCSHHHHHHHHHHHHT-TCCSEEEEESCHHHHHHHHHH-CTT------CEEEE-CCSCCHHHHHHH
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHh-chh------ccccc-ccccchHHHHHH
Confidence 445667799999999976 78888887763 235 99999999999999875 221 22222 1110 00
Q ss_pred ---CCCCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEE
Q 018003 243 ---PFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 286 (362)
Q Consensus 243 ---p~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~ 286 (362)
......+|+|+-.- ..+ ..+....++|++||++++...
T Consensus 244 v~~~t~g~g~Dvvid~~-----g~~-~~~~~~~~~l~~~G~iv~~G~ 284 (363)
T 3m6i_A 244 IVESFGGIEPAVALECT-----GVE-SSIAAAIWAVKFGGKVFVIGV 284 (363)
T ss_dssp HHHHTSSCCCSEEEECS-----CCH-HHHHHHHHHSCTTCEEEECCC
T ss_pred HHHHhCCCCCCEEEECC-----CCh-HHHHHHHHHhcCCCEEEEEcc
Confidence 01234699998533 232 358889999999999987643
No 357
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=93.26 E-value=0.46 Score=43.45 Aligned_cols=97 Identities=13% Similarity=0.105 Sum_probs=65.1
Q ss_pred CCCCCCeEEEEcCcc-chHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC-----C-CC
Q 018003 174 KPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F-AS 246 (362)
Q Consensus 174 ~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p-----~-~~ 246 (362)
...++.+||-+|+|. |..+..+++.....+|+++|.+++.++.+++. .-...+..+- +.. . ..
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~l---------Ga~~~i~~~~-~~~~~v~~~t~g 237 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREV---------GADAAVKSGA-GAADAIRELTGG 237 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHT---------TCSEEEECST-THHHHHHHHHGG
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHc---------CCCEEEcCCC-cHHHHHHHHhCC
Confidence 456789999999976 88887777753235999999999999888763 1111222111 110 0 12
Q ss_pred CcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEE
Q 018003 247 SSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 286 (362)
Q Consensus 247 ~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~ 286 (362)
..+|+|+-.- ..+ ..++...+.|++||++++...
T Consensus 238 ~g~d~v~d~~-----G~~-~~~~~~~~~l~~~G~iv~~G~ 271 (345)
T 3jv7_A 238 QGATAVFDFV-----GAQ-STIDTAQQVVAVDGHISVVGI 271 (345)
T ss_dssp GCEEEEEESS-----CCH-HHHHHHHHHEEEEEEEEECSC
T ss_pred CCCeEEEECC-----CCH-HHHHHHHHHHhcCCEEEEECC
Confidence 3689888532 232 468899999999999987643
No 358
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=93.21 E-value=0.26 Score=45.15 Aligned_cols=96 Identities=15% Similarity=0.170 Sum_probs=62.4
Q ss_pred cCCCCCCeEEEEcCc--cchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC-------
Q 018003 173 LKPVLGGNIIDASCG--SGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP------- 243 (362)
Q Consensus 173 l~~~~~~~vLDiGcG--~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p------- 243 (362)
....++.+||-.|+| .|..+..+++...+.+|+++|.+++.++.+++. .... .+ |..+..
T Consensus 166 ~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~--------g~~~-~~--~~~~~~~~~~~~~ 234 (347)
T 1jvb_A 166 ASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRA--------GADY-VI--NASMQDPLAEIRR 234 (347)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHH--------TCSE-EE--ETTTSCHHHHHHH
T ss_pred cCCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh--------CCCE-Ee--cCCCccHHHHHHH
Confidence 456678999999998 466655555542124899999999888888653 1111 11 222111
Q ss_pred CCC-CcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEE
Q 018003 244 FAS-SSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 285 (362)
Q Consensus 244 ~~~-~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~ 285 (362)
... +.+|+|+.... . ...++...+.|+|+|+++...
T Consensus 235 ~~~~~~~d~vi~~~g-----~-~~~~~~~~~~l~~~G~iv~~g 271 (347)
T 1jvb_A 235 ITESKGVDAVIDLNN-----S-EKTLSVYPKALAKQGKYVMVG 271 (347)
T ss_dssp HTTTSCEEEEEESCC-----C-HHHHTTGGGGEEEEEEEEECC
T ss_pred HhcCCCceEEEECCC-----C-HHHHHHHHHHHhcCCEEEEEC
Confidence 112 47999986543 2 346888899999999988753
No 359
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=93.13 E-value=0.52 Score=43.58 Aligned_cols=101 Identities=16% Similarity=0.135 Sum_probs=65.0
Q ss_pred HhhcCCCCCCeEEEEcCcc-chHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEe-cC-CCC----
Q 018003 170 KGYLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRA-DI-SRL---- 242 (362)
Q Consensus 170 ~~~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~-d~-~~~---- 242 (362)
.+.....++.+||-+|+|. |.++..+++..-..+|+++|.+++.++.+++. ... ..+.. +. .++
T Consensus 183 ~~~~~~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~l--------Ga~-~vi~~~~~~~~~~~~v 253 (373)
T 2fzw_A 183 VNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEF--------GAT-ECINPQDFSKPIQEVL 253 (373)
T ss_dssp HTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHH--------TCS-EEECGGGCSSCHHHHH
T ss_pred HhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHc--------CCc-eEeccccccccHHHHH
Confidence 3445567789999999875 77777777653222799999999988888763 111 12211 10 111
Q ss_pred -CCCCCcceEEEecccccCCCCHHHHHHHHHhhccCC-cEEEEEE
Q 018003 243 -PFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPG-GVFVGTT 285 (362)
Q Consensus 243 -p~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~Lkpg-G~li~~~ 285 (362)
....+.+|+|+-.- .. ...++...+.|+++ |+++...
T Consensus 254 ~~~~~~g~D~vid~~-----g~-~~~~~~~~~~l~~~~G~iv~~G 292 (373)
T 2fzw_A 254 IEMTDGGVDYSFECI-----GN-VKVMRAALEACHKGWGVSVVVG 292 (373)
T ss_dssp HHHTTSCBSEEEECS-----CC-HHHHHHHHHTBCTTTCEEEECS
T ss_pred HHHhCCCCCEEEECC-----Cc-HHHHHHHHHhhccCCcEEEEEe
Confidence 01123699988433 22 24588899999999 9988753
No 360
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=93.13 E-value=0.36 Score=44.05 Aligned_cols=97 Identities=12% Similarity=0.023 Sum_probs=64.0
Q ss_pred hhcCCCCCCeEEEEcC--ccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCC---CC--
Q 018003 171 GYLKPVLGGNIIDASC--GSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR---LP-- 243 (362)
Q Consensus 171 ~~l~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~---~p-- 243 (362)
+.....++.+||-.|+ |.|..+..+++.. +.+|++++.+++.++.+++.+ ... ..+ |... +.
T Consensus 149 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~-G~~V~~~~~~~~~~~~~~~~~-------g~~-~~~--d~~~~~~~~~~ 217 (345)
T 2j3h_A 149 EVCSPKEGETVYVSAASGAVGQLVGQLAKMM-GCYVVGSAGSKEKVDLLKTKF-------GFD-DAF--NYKEESDLTAA 217 (345)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTS-------CCS-EEE--ETTSCSCSHHH
T ss_pred HHhCCCCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHc-------CCc-eEE--ecCCHHHHHHH
Confidence 4456677899999997 4577776666642 249999999998888776421 111 111 3221 10
Q ss_pred ---CCCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEE
Q 018003 244 ---FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 285 (362)
Q Consensus 244 ---~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~ 285 (362)
...+.+|+|+.+-. . ..++...+.|++||++++..
T Consensus 218 ~~~~~~~~~d~vi~~~g-----~--~~~~~~~~~l~~~G~~v~~G 255 (345)
T 2j3h_A 218 LKRCFPNGIDIYFENVG-----G--KMLDAVLVNMNMHGRIAVCG 255 (345)
T ss_dssp HHHHCTTCEEEEEESSC-----H--HHHHHHHTTEEEEEEEEECC
T ss_pred HHHHhCCCCcEEEECCC-----H--HHHHHHHHHHhcCCEEEEEc
Confidence 11246999986543 2 36888999999999998753
No 361
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=92.93 E-value=0.39 Score=43.81 Aligned_cols=102 Identities=15% Similarity=0.183 Sum_probs=64.2
Q ss_pred HHHhhcCCCCCCeEEEEcCc--cchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC--
Q 018003 168 LMKGYLKPVLGGNIIDASCG--SGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-- 243 (362)
Q Consensus 168 ~l~~~l~~~~~~~vLDiGcG--~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p-- 243 (362)
.+.+.....++.+||-+|+| .|..+..+++.. +.+|+++|.+++.++.+++. ... ..+...-.++.
T Consensus 135 ~~~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~l--------ga~-~~~~~~~~~~~~~ 204 (340)
T 3gms_A 135 TCTETLNLQRNDVLLVNACGSAIGHLFAQLSQIL-NFRLIAVTRNNKHTEELLRL--------GAA-YVIDTSTAPLYET 204 (340)
T ss_dssp HHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHH-TCEEEEEESSSTTHHHHHHH--------TCS-EEEETTTSCHHHH
T ss_pred HHHHhcccCCCCEEEEeCCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhC--------CCc-EEEeCCcccHHHH
Confidence 34455667789999999987 577776666642 24999999999888888763 111 12211111110
Q ss_pred ----CCCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEE
Q 018003 244 ----FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 286 (362)
Q Consensus 244 ----~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~ 286 (362)
.....+|+|+..-. .+ .+.+..+.|++||+++....
T Consensus 205 ~~~~~~~~g~Dvvid~~g-----~~--~~~~~~~~l~~~G~iv~~G~ 244 (340)
T 3gms_A 205 VMELTNGIGADAAIDSIG-----GP--DGNELAFSLRPNGHFLTIGL 244 (340)
T ss_dssp HHHHTTTSCEEEEEESSC-----HH--HHHHHHHTEEEEEEEEECCC
T ss_pred HHHHhCCCCCcEEEECCC-----Ch--hHHHHHHHhcCCCEEEEEee
Confidence 11246999986443 22 23445589999999987643
No 362
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=92.91 E-value=0.49 Score=43.04 Aligned_cols=98 Identities=18% Similarity=0.181 Sum_probs=63.9
Q ss_pred hhcCCCCCCeEEEEcC--ccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC-----
Q 018003 171 GYLKPVLGGNIIDASC--GSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP----- 243 (362)
Q Consensus 171 ~~l~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p----- 243 (362)
+.....++.+||-+|+ |.|..+..+++.. +.+|++++.+++.++.+++. .....+..+-.++.
T Consensus 142 ~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~---------ga~~~~~~~~~~~~~~~~~ 211 (334)
T 3qwb_A 142 EAYHVKKGDYVLLFAAAGGVGLILNQLLKMK-GAHTIAVASTDEKLKIAKEY---------GAEYLINASKEDILRQVLK 211 (334)
T ss_dssp TTSCCCTTCEEEESSTTBHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHT---------TCSEEEETTTSCHHHHHHH
T ss_pred HhccCCCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc---------CCcEEEeCCCchHHHHHHH
Confidence 3345677999999994 3477777776653 34999999999988887762 11112221111110
Q ss_pred -CCCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEE
Q 018003 244 -FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 285 (362)
Q Consensus 244 -~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~ 285 (362)
.....+|+|+..-.- ..++...+.|++||+++...
T Consensus 212 ~~~~~g~D~vid~~g~-------~~~~~~~~~l~~~G~iv~~G 247 (334)
T 3qwb_A 212 FTNGKGVDASFDSVGK-------DTFEISLAALKRKGVFVSFG 247 (334)
T ss_dssp HTTTSCEEEEEECCGG-------GGHHHHHHHEEEEEEEEECC
T ss_pred HhCCCCceEEEECCCh-------HHHHHHHHHhccCCEEEEEc
Confidence 113469999865432 35788889999999998764
No 363
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=92.82 E-value=1.1 Score=40.64 Aligned_cols=103 Identities=16% Similarity=0.054 Sum_probs=65.5
Q ss_pred HHhhcCCCCCCeEEEEcCcc-chHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC----
Q 018003 169 MKGYLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP---- 243 (362)
Q Consensus 169 l~~~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p---- 243 (362)
........++.+||=.|+|. |.++..+++..-...++++|.+++.++.+++. .-...+...-...+
T Consensus 152 ~~~~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~l---------Ga~~~i~~~~~~~~~~~~ 222 (346)
T 4a2c_A 152 AFHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSF---------GAMQTFNSSEMSAPQMQS 222 (346)
T ss_dssp HHHHTTCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT---------TCSEEEETTTSCHHHHHH
T ss_pred HHHHhccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHc---------CCeEEEeCCCCCHHHHHH
Confidence 34455667799999999986 66666666653334678999999988888773 11222222111111
Q ss_pred --CCCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEE
Q 018003 244 --FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 286 (362)
Q Consensus 244 --~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~ 286 (362)
-....+|+|+..- .. ...++...++|++||.+++...
T Consensus 223 ~~~~~~g~d~v~d~~-----G~-~~~~~~~~~~l~~~G~~v~~g~ 261 (346)
T 4a2c_A 223 VLRELRFNQLILETA-----GV-PQTVELAVEIAGPHAQLALVGT 261 (346)
T ss_dssp HHGGGCSSEEEEECS-----CS-HHHHHHHHHHCCTTCEEEECCC
T ss_pred hhcccCCcccccccc-----cc-cchhhhhhheecCCeEEEEEec
Confidence 1124578776432 22 3458888999999999987643
No 364
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=92.73 E-value=0.34 Score=44.32 Aligned_cols=97 Identities=12% Similarity=0.079 Sum_probs=64.4
Q ss_pred hhcCCCCCCeEEEEcC--ccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC-----
Q 018003 171 GYLKPVLGGNIIDASC--GSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP----- 243 (362)
Q Consensus 171 ~~l~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p----- 243 (362)
+.....++.+||-+|+ |.|..+..+++.. +.+|++++.+++.++.+++. ... .++..+ ..+.
T Consensus 153 ~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~--------ga~-~v~~~~-~~~~~~v~~ 221 (342)
T 4eye_A 153 RRGQLRAGETVLVLGAAGGIGTAAIQIAKGM-GAKVIAVVNRTAATEFVKSV--------GAD-IVLPLE-EGWAKAVRE 221 (342)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHH--------TCS-EEEESS-TTHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhc--------CCc-EEecCc-hhHHHHHHH
Confidence 4556677999999997 3577777777653 34999999999888888763 111 122222 2211
Q ss_pred -CCCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEE
Q 018003 244 -FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 285 (362)
Q Consensus 244 -~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~ 285 (362)
.....+|+|+..-.- ..+....+.|++||++++..
T Consensus 222 ~~~~~g~Dvvid~~g~-------~~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 222 ATGGAGVDMVVDPIGG-------PAFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp HTTTSCEEEEEESCC---------CHHHHHHTEEEEEEEEEC-
T ss_pred HhCCCCceEEEECCch-------hHHHHHHHhhcCCCEEEEEE
Confidence 112369999865442 24778889999999998764
No 365
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=92.69 E-value=0.77 Score=42.11 Aligned_cols=96 Identities=14% Similarity=0.081 Sum_probs=62.7
Q ss_pred hhcCCCCCCeEEEEcC--ccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC-----
Q 018003 171 GYLKPVLGGNIIDASC--GSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP----- 243 (362)
Q Consensus 171 ~~l~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p----- 243 (362)
+.....++.+||-.|+ |.|..+..+++.. +.+|++++.+++.++.+++. ... .. .|..+..
T Consensus 164 ~~~~~~~g~~vlV~GasggiG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~--------ga~-~~--~d~~~~~~~~~~ 231 (351)
T 1yb5_A 164 HSACVKAGESVLVHGASGGVGLAACQIARAY-GLKILGTAGTEEGQKIVLQN--------GAH-EV--FNHREVNYIDKI 231 (351)
T ss_dssp TTSCCCTTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHT--------TCS-EE--EETTSTTHHHHH
T ss_pred HhhCCCCcCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCChhHHHHHHHc--------CCC-EE--EeCCCchHHHHH
Confidence 3455667899999997 4577666666542 34999999999888876652 111 11 2322211
Q ss_pred ---CCCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEE
Q 018003 244 ---FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 285 (362)
Q Consensus 244 ---~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~ 285 (362)
.....+|+|+.+.. ...+....+.|+++|+++...
T Consensus 232 ~~~~~~~~~D~vi~~~G-------~~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 232 KKYVGEKGIDIIIEMLA-------NVNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp HHHHCTTCEEEEEESCH-------HHHHHHHHHHEEEEEEEEECC
T ss_pred HHHcCCCCcEEEEECCC-------hHHHHHHHHhccCCCEEEEEe
Confidence 11236999986543 135778899999999998754
No 366
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=92.63 E-value=0.32 Score=44.54 Aligned_cols=95 Identities=16% Similarity=0.151 Sum_probs=62.3
Q ss_pred cCCCCCCeEEEEcC--ccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCC---CCC----
Q 018003 173 LKPVLGGNIIDASC--GSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADIS---RLP---- 243 (362)
Q Consensus 173 l~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~---~~p---- 243 (362)
....++.+||-+|+ |.|..+..+++.. +.+|+++|.+++.++.+++. ... .. .|.. ++.
T Consensus 165 ~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~-Ga~V~~~~~~~~~~~~~~~~--------g~~-~~--~d~~~~~~~~~~~~ 232 (347)
T 2hcy_A 165 ANLMAGHWVAISGAAGGLGSLAVQYAKAM-GYRVLGIDGGEGKEELFRSI--------GGE-VF--IDFTKEKDIVGAVL 232 (347)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECSTTHHHHHHHT--------TCC-EE--EETTTCSCHHHHHH
T ss_pred cCCCCCCEEEEECCCchHHHHHHHHHHHC-CCcEEEEcCCHHHHHHHHHc--------CCc-eE--EecCccHhHHHHHH
Confidence 35667899999998 4577766666542 24999999998887777652 111 11 2432 110
Q ss_pred -CCCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEE
Q 018003 244 -FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 285 (362)
Q Consensus 244 -~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~ 285 (362)
...+.+|+|+..-. . ...++.+.+.|+++|+++...
T Consensus 233 ~~~~~~~D~vi~~~g-----~-~~~~~~~~~~l~~~G~iv~~g 269 (347)
T 2hcy_A 233 KATDGGAHGVINVSV-----S-EAAIEASTRYVRANGTTVLVG 269 (347)
T ss_dssp HHHTSCEEEEEECSS-----C-HHHHHHHTTSEEEEEEEEECC
T ss_pred HHhCCCCCEEEECCC-----c-HHHHHHHHHHHhcCCEEEEEe
Confidence 01126899986543 1 346888999999999988754
No 367
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=92.63 E-value=0.3 Score=44.43 Aligned_cols=57 Identities=21% Similarity=0.150 Sum_probs=41.2
Q ss_pred CCEEEEEecCCC-CC-CCCCcceEEEecccccCC--------------CCHHHHHHHHHhhccCCcEEEEEEE
Q 018003 230 ENFLLVRADISR-LP-FASSSIDAVHAGAAIHCW--------------SSPSTGVAEISRVLRPGGVFVGTTY 286 (362)
Q Consensus 230 ~~~~~~~~d~~~-~p-~~~~~fD~V~~~~vl~h~--------------~d~~~~l~~i~r~LkpgG~li~~~~ 286 (362)
....++++|... +. +++++||+|++.--.... ......++++.++|||||.+++...
T Consensus 13 ~~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~ 85 (323)
T 1boo_A 13 SNGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFG 85 (323)
T ss_dssp SSEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEEC
Confidence 467888998754 33 457899999987432111 1245789999999999999998764
No 368
>1vq8_Z 50S ribosomal protein L37AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1vq4_Z* 1vq6_Z* 1vq5_Z* 1vq7_Z* 1vq9_Z* 1vqk_Z* 1vql_Z* 1vqm_Z* 1vqn_Z* 1vqo_Z* 1vqp_Z* 1yhq_Z* 1yi2_Z* 1yij_Z* 1yit_Z* 1yj9_Z* 1yjn_Z* 1yjw_Z* 2qa4_Z* 1s72_Z* ...
Probab=92.57 E-value=0.047 Score=39.02 Aligned_cols=32 Identities=25% Similarity=0.477 Sum_probs=24.0
Q ss_pred CeeeCCCCCCCcccccCCCCccccccCCceecCccCccccc
Q 018003 70 NVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSG 110 (362)
Q Consensus 70 ~~l~CP~C~~~l~~~~~~~~~~~~~~~~~l~C~~C~~~~~~ 110 (362)
..+.||.||.+..... ..+.|.|+.|+..+..
T Consensus 26 ~~y~Cp~CG~~~v~r~---------atGiW~C~~Cg~~~ag 57 (83)
T 1vq8_Z 26 EDHACPNCGEDRVDRQ---------GTGIWQCSYCDYKFTG 57 (83)
T ss_dssp SCEECSSSCCEEEEEE---------ETTEEEETTTCCEEEC
T ss_pred ccCcCCCCCCcceecc---------CCCeEECCCCCCEecC
Confidence 4579999998654432 2379999999987665
No 369
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=92.53 E-value=0.53 Score=42.64 Aligned_cols=100 Identities=12% Similarity=0.038 Sum_probs=64.9
Q ss_pred HhhcCCCCCCeEEEEc-Cc-cchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC----
Q 018003 170 KGYLKPVLGGNIIDAS-CG-SGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP---- 243 (362)
Q Consensus 170 ~~~l~~~~~~~vLDiG-cG-~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p---- 243 (362)
.+.....++.+||-+| +| .|..+..+++.. +.+|++++.+++.++.+++. ... ..+..+-.++.
T Consensus 133 ~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~--------Ga~-~~~~~~~~~~~~~~~ 202 (325)
T 3jyn_A 133 RQTYQVKPGEIILFHAAAGGVGSLACQWAKAL-GAKLIGTVSSPEKAAHAKAL--------GAW-ETIDYSHEDVAKRVL 202 (325)
T ss_dssp HTTSCCCTTCEEEESSTTSHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHHH--------TCS-EEEETTTSCHHHHHH
T ss_pred HHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc--------CCC-EEEeCCCccHHHHHH
Confidence 3444567799999999 34 477777766652 24999999999988888763 111 12221111110
Q ss_pred --CCCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEE
Q 018003 244 --FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 286 (362)
Q Consensus 244 --~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~ 286 (362)
.....+|+|+..-.- ..+....+.|++||+++....
T Consensus 203 ~~~~~~g~Dvvid~~g~-------~~~~~~~~~l~~~G~iv~~g~ 240 (325)
T 3jyn_A 203 ELTDGKKCPVVYDGVGQ-------DTWLTSLDSVAPRGLVVSFGN 240 (325)
T ss_dssp HHTTTCCEEEEEESSCG-------GGHHHHHTTEEEEEEEEECCC
T ss_pred HHhCCCCceEEEECCCh-------HHHHHHHHHhcCCCEEEEEec
Confidence 122469999865432 357788999999999988654
No 370
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=92.40 E-value=0.24 Score=45.69 Aligned_cols=98 Identities=10% Similarity=0.105 Sum_probs=62.1
Q ss_pred cCCCCCCeEEEEcCcc-chHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCC-CC--CCCCCc
Q 018003 173 LKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADIS-RL--PFASSS 248 (362)
Q Consensus 173 l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~-~~--p~~~~~ 248 (362)
....++.+||-+|+|. |.++..+++.. +.+|+++|.+++.++.+++. . .. .++..+-. ++ ... +.
T Consensus 175 ~~~~~g~~VlV~GaG~vG~~~~qlak~~-Ga~Vi~~~~~~~~~~~~~~l-G-------a~-~v~~~~~~~~~~~~~~-~~ 243 (360)
T 1piw_A 175 NGCGPGKKVGIVGLGGIGSMGTLISKAM-GAETYVISRSSRKREDAMKM-G-------AD-HYIATLEEGDWGEKYF-DT 243 (360)
T ss_dssp TTCSTTCEEEEECCSHHHHHHHHHHHHH-TCEEEEEESSSTTHHHHHHH-T-------CS-EEEEGGGTSCHHHHSC-SC
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHc-C-------CC-EEEcCcCchHHHHHhh-cC
Confidence 4566789999999865 77777776642 23899999999888888763 1 11 12221111 11 011 46
Q ss_pred ceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEE
Q 018003 249 IDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 285 (362)
Q Consensus 249 fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~ 285 (362)
+|+|+..-.-. ....++...++|++||+++...
T Consensus 244 ~D~vid~~g~~----~~~~~~~~~~~l~~~G~iv~~g 276 (360)
T 1piw_A 244 FDLIVVCASSL----TDIDFNIMPKAMKVGGRIVSIS 276 (360)
T ss_dssp EEEEEECCSCS----TTCCTTTGGGGEEEEEEEEECC
T ss_pred CCEEEECCCCC----cHHHHHHHHHHhcCCCEEEEec
Confidence 99998654320 0123566788999999988653
No 371
>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}
Probab=92.38 E-value=0.032 Score=38.89 Aligned_cols=14 Identities=50% Similarity=1.374 Sum_probs=10.5
Q ss_pred CeeeCCCCCCCccc
Q 018003 70 NVLACPICYKPLTW 83 (362)
Q Consensus 70 ~~l~CP~C~~~l~~ 83 (362)
.+..||+||+++..
T Consensus 7 ~~~~~PlCG~~L~W 20 (95)
T 2k5c_A 7 HMAKCPICGSPLKW 20 (95)
T ss_dssp -CEECSSSCCEECH
T ss_pred ccccCCcCCCccCH
Confidence 56789999997654
No 372
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=92.34 E-value=0.89 Score=41.40 Aligned_cols=94 Identities=21% Similarity=0.182 Sum_probs=62.4
Q ss_pred CCCCCCeEEEEcCcc-chHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCC------C
Q 018003 174 KPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA------S 246 (362)
Q Consensus 174 ~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~------~ 246 (362)
...++.+||-+|+|. |..+..+++.. +.+|+++|.+++.++.+++. ... .. .|.....+. .
T Consensus 161 ~~~~g~~VlV~GaG~vG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~l--------Ga~-~~--~d~~~~~~~~~~~~~~ 228 (339)
T 1rjw_A 161 GAKPGEWVAIYGIGGLGHVAVQYAKAM-GLNVVAVDIGDEKLELAKEL--------GAD-LV--VNPLKEDAAKFMKEKV 228 (339)
T ss_dssp TCCTTCEEEEECCSTTHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHT--------TCS-EE--ECTTTSCHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHC--------CCC-EE--ecCCCccHHHHHHHHh
Confidence 566789999999964 77766666653 34999999999988888652 111 11 233221110 0
Q ss_pred CcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEE
Q 018003 247 SSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 285 (362)
Q Consensus 247 ~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~ 285 (362)
+.+|+|+..-. . ...++...++|+++|+++...
T Consensus 229 ~~~d~vid~~g-----~-~~~~~~~~~~l~~~G~~v~~g 261 (339)
T 1rjw_A 229 GGVHAAVVTAV-----S-KPAFQSAYNSIRRGGACVLVG 261 (339)
T ss_dssp SSEEEEEESSC-----C-HHHHHHHHHHEEEEEEEEECC
T ss_pred CCCCEEEECCC-----C-HHHHHHHHHHhhcCCEEEEec
Confidence 46899885432 2 246788899999999988653
No 373
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=92.20 E-value=0.84 Score=41.64 Aligned_cols=94 Identities=15% Similarity=0.096 Sum_probs=62.8
Q ss_pred cCCCCCCeEEEEcC--ccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC-------
Q 018003 173 LKPVLGGNIIDASC--GSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP------- 243 (362)
Q Consensus 173 l~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p------- 243 (362)
....++.+||-+|+ |.|..+..+++.. +.+|+++|.+++.++.+++. . .. .. .|.....
T Consensus 162 ~~~~~g~~vlV~Gasg~iG~~~~~~a~~~-G~~Vi~~~~~~~~~~~~~~~-g-------a~-~~--~d~~~~~~~~~~~~ 229 (343)
T 2eih_A 162 LGVRPGDDVLVMAAGSGVSVAAIQIAKLF-GARVIATAGSEDKLRRAKAL-G-------AD-ET--VNYTHPDWPKEVRR 229 (343)
T ss_dssp SCCCTTCEEEECSTTSTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHH-T-------CS-EE--EETTSTTHHHHHHH
T ss_pred cCCCCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhc-C-------CC-EE--EcCCcccHHHHHHH
Confidence 35567899999998 4677777766653 34999999999988888653 1 11 11 2332211
Q ss_pred -CCCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEE
Q 018003 244 -FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 285 (362)
Q Consensus 244 -~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~ 285 (362)
.....+|+|+..-. . ..++.+.+.|+++|+++...
T Consensus 230 ~~~~~~~d~vi~~~g-~------~~~~~~~~~l~~~G~~v~~g 265 (343)
T 2eih_A 230 LTGGKGADKVVDHTG-A------LYFEGVIKATANGGRIAIAG 265 (343)
T ss_dssp HTTTTCEEEEEESSC-S------SSHHHHHHHEEEEEEEEESS
T ss_pred HhCCCCceEEEECCC-H------HHHHHHHHhhccCCEEEEEe
Confidence 11246999986654 2 24778889999999988754
No 374
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=92.20 E-value=0.87 Score=41.95 Aligned_cols=101 Identities=12% Similarity=0.091 Sum_probs=65.1
Q ss_pred HHhhcCCCCCCeEEEEc-Cc-cchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC---
Q 018003 169 MKGYLKPVLGGNIIDAS-CG-SGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP--- 243 (362)
Q Consensus 169 l~~~l~~~~~~~vLDiG-cG-~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p--- 243 (362)
+.+.....++.+||-+| +| .|..+..+++.. +.+|++++.+++.++.+++. ... ..+..+-..+.
T Consensus 155 l~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~~--------Ga~-~~~~~~~~~~~~~~ 224 (362)
T 2c0c_A 155 LKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKA-KCHVIGTCSSDEKSAFLKSL--------GCD-RPINYKTEPVGTVL 224 (362)
T ss_dssp HHHHTCCCTTCEEEETTTTBTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHT--------TCS-EEEETTTSCHHHHH
T ss_pred HHHhcCCCCCCEEEEeCCCcHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHHc--------CCc-EEEecCChhHHHHH
Confidence 33444566789999999 34 577777777653 34999999999888887762 111 12221111110
Q ss_pred --CCCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEE
Q 018003 244 --FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 286 (362)
Q Consensus 244 --~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~ 286 (362)
...+.+|+|+..-. . ..++.+.+.|+++|+++....
T Consensus 225 ~~~~~~g~D~vid~~g-----~--~~~~~~~~~l~~~G~iv~~g~ 262 (362)
T 2c0c_A 225 KQEYPEGVDVVYESVG-----G--AMFDLAVDALATKGRLIVIGF 262 (362)
T ss_dssp HHHCTTCEEEEEECSC-----T--HHHHHHHHHEEEEEEEEECCC
T ss_pred HHhcCCCCCEEEECCC-----H--HHHHHHHHHHhcCCEEEEEeC
Confidence 11246999986543 2 468889999999999887643
No 375
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=91.86 E-value=0.72 Score=42.36 Aligned_cols=89 Identities=17% Similarity=0.179 Sum_probs=59.2
Q ss_pred CeEEEEcCcc-chHH-HHHH-HhCCCCE-EEEEeCCHH---HHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCC-----C
Q 018003 179 GNIIDASCGS-GLFS-RIFA-KSGLFSL-VVALDYSEN---MLKQCYEFVQQESNFPKENFLLVRADISRLPFA-----S 246 (362)
Q Consensus 179 ~~vLDiGcG~-G~~~-~~l~-~~~~~~~-v~gvD~s~~---~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~-----~ 246 (362)
.+||-+|+|. |.++ ..++ +.. +.+ |+++|.+++ .++.+++. ....+ |.....+. .
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~-Ga~~Vi~~~~~~~~~~~~~~~~~l----------Ga~~v--~~~~~~~~~i~~~~ 240 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDK-GYENLYCLGRRDRPDPTIDIIEEL----------DATYV--DSRQTPVEDVPDVY 240 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTT-CCCEEEEEECCCSSCHHHHHHHHT----------TCEEE--ETTTSCGGGHHHHS
T ss_pred CEEEEECCCHHHHHHHHHHHHHHc-CCcEEEEEeCCcccHHHHHHHHHc----------CCccc--CCCccCHHHHHHhC
Confidence 8999999865 7777 7777 542 345 999999987 78887652 22222 33221111 2
Q ss_pred CcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEE
Q 018003 247 SSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 286 (362)
Q Consensus 247 ~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~ 286 (362)
+.+|+|+-. ...+ ..+++..+.|+++|+++....
T Consensus 241 gg~Dvvid~-----~g~~-~~~~~~~~~l~~~G~iv~~g~ 274 (357)
T 2b5w_A 241 EQMDFIYEA-----TGFP-KHAIQSVQALAPNGVGALLGV 274 (357)
T ss_dssp CCEEEEEEC-----SCCH-HHHHHHHHHEEEEEEEEECCC
T ss_pred CCCCEEEEC-----CCCh-HHHHHHHHHHhcCCEEEEEeC
Confidence 368998743 2232 358889999999999887643
No 376
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=91.83 E-value=0.49 Score=44.00 Aligned_cols=100 Identities=21% Similarity=0.264 Sum_probs=64.4
Q ss_pred hhcC-CCCCCeEEEEcCcc-chHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEec---CCC----
Q 018003 171 GYLK-PVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRAD---ISR---- 241 (362)
Q Consensus 171 ~~l~-~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d---~~~---- 241 (362)
+... ..++.+||-+|+|. |.++..+++..-..+|+++|.+++.++.+++. .. -.++..+ -.+
T Consensus 188 ~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~l--------Ga-~~vi~~~~~~~~~~~~~ 258 (380)
T 1vj0_A 188 DEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEI--------GA-DLTLNRRETSVEERRKA 258 (380)
T ss_dssp HTCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHT--------TC-SEEEETTTSCHHHHHHH
T ss_pred HhcCCCCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHc--------CC-cEEEeccccCcchHHHH
Confidence 3455 66789999999775 77777777763114999999999988888752 11 1122211 000
Q ss_pred C-CC-CCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEE
Q 018003 242 L-PF-ASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 285 (362)
Q Consensus 242 ~-p~-~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~ 285 (362)
+ .. ....+|+|+-.-. .+ ..+....+.|+++|+++...
T Consensus 259 v~~~~~g~g~Dvvid~~g-----~~-~~~~~~~~~l~~~G~iv~~G 298 (380)
T 1vj0_A 259 IMDITHGRGADFILEATG-----DS-RALLEGSELLRRGGFYSVAG 298 (380)
T ss_dssp HHHHTTTSCEEEEEECSS-----CT-THHHHHHHHEEEEEEEEECC
T ss_pred HHHHhCCCCCcEEEECCC-----CH-HHHHHHHHHHhcCCEEEEEe
Confidence 0 01 1236999985432 21 35788899999999988754
No 377
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=91.66 E-value=0.75 Score=42.06 Aligned_cols=96 Identities=11% Similarity=0.087 Sum_probs=63.6
Q ss_pred hhcCCCCCCeEEEEcCcc-chHHHHHHHhCCCC-EEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC-----
Q 018003 171 GYLKPVLGGNIIDASCGS-GLFSRIFAKSGLFS-LVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP----- 243 (362)
Q Consensus 171 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p----- 243 (362)
+.... ++.+||-+|+|. |..+..+++.. +. +|+++|.+++.++.+++. ... ..+ |.....
T Consensus 162 ~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~-Ga~~Vi~~~~~~~~~~~~~~~--------Ga~-~~~--~~~~~~~~~~v 228 (348)
T 2d8a_A 162 LAGPI-SGKSVLITGAGPLGLLGIAVAKAS-GAYPVIVSEPSDFRRELAKKV--------GAD-YVI--NPFEEDVVKEV 228 (348)
T ss_dssp TTSCC-TTCCEEEECCSHHHHHHHHHHHHT-TCCSEEEECSCHHHHHHHHHH--------TCS-EEE--CTTTSCHHHHH
T ss_pred HhcCC-CCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHh--------CCC-EEE--CCCCcCHHHHH
Confidence 34455 789999999974 77777777653 34 899999999888888753 111 111 222111
Q ss_pred --C-CCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEE
Q 018003 244 --F-ASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 285 (362)
Q Consensus 244 --~-~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~ 285 (362)
. ....+|+|+..-. . ...++.+.+.|+++|+++...
T Consensus 229 ~~~~~g~g~D~vid~~g-----~-~~~~~~~~~~l~~~G~iv~~g 267 (348)
T 2d8a_A 229 MDITDGNGVDVFLEFSG-----A-PKALEQGLQAVTPAGRVSLLG 267 (348)
T ss_dssp HHHTTTSCEEEEEECSC-----C-HHHHHHHHHHEEEEEEEEECC
T ss_pred HHHcCCCCCCEEEECCC-----C-HHHHHHHHHHHhcCCEEEEEc
Confidence 0 1236999985432 2 345788899999999988754
No 378
>2jne_A Hypothetical protein YFGJ; zinc fingers, two zinc, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli} SCOP: g.41.18.1
Probab=91.49 E-value=0.084 Score=38.30 Aligned_cols=35 Identities=23% Similarity=0.418 Sum_probs=23.5
Q ss_pred ccccCCeeeCCCCCCCcccccCCCCccccccCCceecCccCccccc
Q 018003 65 ASTSKNVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSG 110 (362)
Q Consensus 65 ~~~~~~~l~CP~C~~~l~~~~~~~~~~~~~~~~~l~C~~C~~~~~~ 110 (362)
.++..+...||.|+.++...+ +.+.|..|+..|..
T Consensus 26 ~~~~~M~~~CP~Cq~eL~~~g-----------~~~hC~~C~~~f~~ 60 (101)
T 2jne_A 26 PRGSHMELHCPQCQHVLDQDN-----------GHARCRSCGEFIEM 60 (101)
T ss_dssp -----CCCBCSSSCSBEEEET-----------TEEEETTTCCEEEE
T ss_pred cCcccccccCccCCCcceecC-----------CEEECccccchhhc
Confidence 444556689999999988754 56778888876654
No 379
>2j6a_A Protein TRM112; translation termination, methyltransferase, transferase, ERF1, nuclear protein, protein methylation; 1.7A {Saccharomyces cerevisiae}
Probab=91.48 E-value=0.043 Score=43.23 Aligned_cols=28 Identities=14% Similarity=0.294 Sum_probs=24.3
Q ss_pred ccCCceecCccCcccccCCceeeeecCC
Q 018003 94 AAGSSLQCNTCKKTYSGVGTHFDMTAAS 121 (362)
Q Consensus 94 ~~~~~l~C~~C~~~~~~~~g~~~~~~~~ 121 (362)
+.++.+.|+.||+.|++++|++.++..+
T Consensus 105 v~eg~L~C~~cg~~YPI~dGIP~mL~~e 132 (141)
T 2j6a_A 105 IAEGEMKCRNCGHIYYIKNGIPNLLLPP 132 (141)
T ss_dssp EEEEEEECTTTCCEEEEETTEESSCCCS
T ss_pred ccCCEEECCCCCCcccccCCccCcCCcH
Confidence 3457899999999999999999988764
No 380
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=91.39 E-value=0.44 Score=42.76 Aligned_cols=71 Identities=11% Similarity=0.061 Sum_probs=54.3
Q ss_pred CCCeEEEEcCccchHHHHHHHhCCCCE-EEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCC---C-CCcceE
Q 018003 177 LGGNIIDASCGSGLFSRIFAKSGLFSL-VVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF---A-SSSIDA 251 (362)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~-v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~---~-~~~fD~ 251 (362)
...+++|+=||.|.+...+.+.|.... +.++|+++.+.+..+.+ .+...++.+|+.++.. + .+.+|+
T Consensus 15 ~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N--------~~~~~~~~~DI~~i~~~~i~~~~~~Dl 86 (295)
T 2qrv_A 15 KPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVR--------HQGKIMYVGDVRSVTQKHIQEWGPFDL 86 (295)
T ss_dssp CCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHH--------TTTCEEEECCGGGCCHHHHHHTCCCSE
T ss_pred CCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHh--------CCCCceeCCChHHccHHHhcccCCcCE
Confidence 456899999999999999999886433 68999999888776665 3445678899987641 1 136899
Q ss_pred EEec
Q 018003 252 VHAG 255 (362)
Q Consensus 252 V~~~ 255 (362)
++..
T Consensus 87 l~gg 90 (295)
T 2qrv_A 87 VIGG 90 (295)
T ss_dssp EEEC
T ss_pred EEec
Confidence 9976
No 381
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=91.21 E-value=0.65 Score=42.03 Aligned_cols=95 Identities=11% Similarity=0.072 Sum_probs=62.2
Q ss_pred hcCCCCCCeEEEEcC--ccchHHHHHHH-hCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC-----
Q 018003 172 YLKPVLGGNIIDASC--GSGLFSRIFAK-SGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP----- 243 (362)
Q Consensus 172 ~l~~~~~~~vLDiGc--G~G~~~~~l~~-~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p----- 243 (362)
.....++.+||-.|+ |.|..+..+++ .|. +|+++|.+++.++.+++. .... .+ |..+..
T Consensus 135 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~--~V~~~~~~~~~~~~~~~~--------g~~~-~~--~~~~~~~~~~~ 201 (327)
T 1qor_A 135 TYEIKPDEQFLFHAAAGGVGLIACQWAKALGA--KLIGTVGTAQKAQSALKA--------GAWQ-VI--NYREEDLVERL 201 (327)
T ss_dssp TSCCCTTCEEEESSTTBHHHHHHHHHHHHHTC--EEEEEESSHHHHHHHHHH--------TCSE-EE--ETTTSCHHHHH
T ss_pred hhCCCCCCEEEEECCCCHHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHc--------CCCE-EE--ECCCccHHHHH
Confidence 445667899999994 45666655555 454 999999999888887763 1111 11 322211
Q ss_pred ---CCCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEE
Q 018003 244 ---FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 286 (362)
Q Consensus 244 ---~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~ 286 (362)
.....+|+|+.+.. ...++.+.+.|++||+++....
T Consensus 202 ~~~~~~~~~D~vi~~~g-------~~~~~~~~~~l~~~G~iv~~g~ 240 (327)
T 1qor_A 202 KEITGGKKVRVVYDSVG-------RDTWERSLDCLQRRGLMVSFGN 240 (327)
T ss_dssp HHHTTTCCEEEEEECSC-------GGGHHHHHHTEEEEEEEEECCC
T ss_pred HHHhCCCCceEEEECCc-------hHHHHHHHHHhcCCCEEEEEec
Confidence 11236999986654 2357888999999999887543
No 382
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=91.08 E-value=1.5 Score=39.99 Aligned_cols=90 Identities=12% Similarity=0.170 Sum_probs=59.8
Q ss_pred CCCeEEEE-cCcc-chHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCC-C-----CCCCCc
Q 018003 177 LGGNIIDA-SCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR-L-----PFASSS 248 (362)
Q Consensus 177 ~~~~vLDi-GcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~-~-----p~~~~~ 248 (362)
++.+||-+ |+|. |..+..+++.. +.+|++++.+++.++.+++. . .. ..+ |... + ....+.
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~l-G-------a~-~vi--~~~~~~~~~~~~~~~~g 217 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAY-GLRVITTASRNETIEWTKKM-G-------AD-IVL--NHKESLLNQFKTQGIEL 217 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEECCSHHHHHHHHHH-T-------CS-EEE--CTTSCHHHHHHHHTCCC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhc-C-------Cc-EEE--ECCccHHHHHHHhCCCC
Confidence 68899999 4554 77777777653 34999999999988888873 1 11 111 1111 1 012346
Q ss_pred ceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEE
Q 018003 249 IDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGT 284 (362)
Q Consensus 249 fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~ 284 (362)
+|+|+..-. -...+..+.++|+++|+++..
T Consensus 218 ~Dvv~d~~g------~~~~~~~~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 218 VDYVFCTFN------TDMYYDDMIQLVKPRGHIATI 247 (346)
T ss_dssp EEEEEESSC------HHHHHHHHHHHEEEEEEEEES
T ss_pred ccEEEECCC------chHHHHHHHHHhccCCEEEEE
Confidence 999885322 235678899999999999754
No 383
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=91.06 E-value=2.1 Score=33.33 Aligned_cols=91 Identities=10% Similarity=0.080 Sum_probs=60.3
Q ss_pred CCeEEEEcCcc-ch-HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC----CCCCcceE
Q 018003 178 GGNIIDASCGS-GL-FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP----FASSSIDA 251 (362)
Q Consensus 178 ~~~vLDiGcG~-G~-~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p----~~~~~fD~ 251 (362)
..+|+=+|+|. |. ++..|.+.|. +|+++|.+++.++.+++ ..+.++.+|..+.. ..-..+|+
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~--~v~vid~~~~~~~~~~~----------~g~~~i~gd~~~~~~l~~a~i~~ad~ 74 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDI--PLVVIETSRTRVDELRE----------RGVRAVLGNAANEEIMQLAHLECAKW 74 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTC--CEEEEESCHHHHHHHHH----------TTCEEEESCTTSHHHHHHTTGGGCSE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC--CEEEEECCHHHHHHHHH----------cCCCEEECCCCCHHHHHhcCcccCCE
Confidence 35899999985 54 3444555565 89999999998887765 35678889986532 11246788
Q ss_pred EEecccccCCCCHH--HHHHHHHhhccCCcEEEEEE
Q 018003 252 VHAGAAIHCWSSPS--TGVAEISRVLRPGGVFVGTT 285 (362)
Q Consensus 252 V~~~~vl~h~~d~~--~~l~~i~r~LkpgG~li~~~ 285 (362)
|+..- ++.. ..+....+.+.|+..++...
T Consensus 75 vi~~~-----~~~~~n~~~~~~a~~~~~~~~iiar~ 105 (140)
T 3fwz_A 75 LILTI-----PNGYEAGEIVASARAKNPDIEIIARA 105 (140)
T ss_dssp EEECC-----SCHHHHHHHHHHHHHHCSSSEEEEEE
T ss_pred EEEEC-----CChHHHHHHHHHHHHHCCCCeEEEEE
Confidence 87543 3333 23445667778888777554
No 384
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=91.05 E-value=1.4 Score=40.47 Aligned_cols=86 Identities=14% Similarity=0.118 Sum_probs=57.1
Q ss_pred CCeEEEEcCcc-chHHHHHHHh-CCCCEEEEEeCCH---HHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCC------C
Q 018003 178 GGNIIDASCGS-GLFSRIFAKS-GLFSLVVALDYSE---NMLKQCYEFVQQESNFPKENFLLVRADISRLPFA------S 246 (362)
Q Consensus 178 ~~~vLDiGcG~-G~~~~~l~~~-~~~~~v~gvD~s~---~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~------~ 246 (362)
+.+||-+|+|. |..+..+++. |. +|+++|.++ +.++.+++. ....+ | .+ .+. .
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga--~Vi~~~~~~~~~~~~~~~~~~----------ga~~v--~-~~-~~~~~~~~~~ 244 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGL--EVWMANRREPTEVEQTVIEET----------KTNYY--N-SS-NGYDKLKDSV 244 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTC--EEEEEESSCCCHHHHHHHHHH----------TCEEE--E-CT-TCSHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC--EEEEEeCCccchHHHHHHHHh----------CCcee--c-hH-HHHHHHHHhC
Confidence 88999999854 6665555554 54 999999998 777777653 12222 3 22 211 1
Q ss_pred CcceEEEecccccCCCCHHHHH-HHHHhhccCCcEEEEEE
Q 018003 247 SSIDAVHAGAAIHCWSSPSTGV-AEISRVLRPGGVFVGTT 285 (362)
Q Consensus 247 ~~fD~V~~~~vl~h~~d~~~~l-~~i~r~LkpgG~li~~~ 285 (362)
+.+|+|+..-.. + ..+ +...+.|+++|+++...
T Consensus 245 ~~~d~vid~~g~-----~-~~~~~~~~~~l~~~G~iv~~g 278 (366)
T 2cdc_A 245 GKFDVIIDATGA-----D-VNILGNVIPLLGRNGVLGLFG 278 (366)
T ss_dssp CCEEEEEECCCC-----C-THHHHHHGGGEEEEEEEEECS
T ss_pred CCCCEEEECCCC-----h-HHHHHHHHHHHhcCCEEEEEe
Confidence 469999865432 2 135 88899999999988754
No 385
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=90.85 E-value=0.58 Score=44.19 Aligned_cols=45 Identities=13% Similarity=0.249 Sum_probs=35.4
Q ss_pred CeEEEEcCccchHHHHHHHh----CC-CCEEEEEeCCHHHHHHHHHHHhh
Q 018003 179 GNIIDASCGSGLFSRIFAKS----GL-FSLVVALDYSENMLKQCYEFVQQ 223 (362)
Q Consensus 179 ~~vLDiGcG~G~~~~~l~~~----~~-~~~v~gvD~s~~~~~~a~~~~~~ 223 (362)
..|+|+|+|+|.+...+.+. ++ ..+++.||+|+...+.-++++..
T Consensus 139 ~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~ 188 (432)
T 4f3n_A 139 RRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLGA 188 (432)
T ss_dssp CEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHHH
T ss_pred CeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHhc
Confidence 58999999999987776543 21 24899999999988877777764
No 386
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=90.74 E-value=0.69 Score=41.74 Aligned_cols=90 Identities=13% Similarity=0.111 Sum_probs=59.5
Q ss_pred eEEEEcC-c-cchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCC-CCCCCcceEEEecc
Q 018003 180 NIIDASC-G-SGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-PFASSSIDAVHAGA 256 (362)
Q Consensus 180 ~vLDiGc-G-~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~-p~~~~~fD~V~~~~ 256 (362)
+||=.|+ | .|..+..+++.. +.+|++++.+++.++.+++. .....+-..+.... ....+.+|+|+-.
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~-Ga~Vi~~~~~~~~~~~~~~l--------Ga~~vi~~~~~~~~~~~~~~~~d~v~d~- 218 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKL-GYQVAAVSGRESTHGYLKSL--------GANRILSRDEFAESRPLEKQLWAGAIDT- 218 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHT-TCCEEEEESCGGGHHHHHHH--------TCSEEEEGGGSSCCCSSCCCCEEEEEES-
T ss_pred eEEEECCCcHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhc--------CCCEEEecCCHHHHHhhcCCCccEEEEC-
Confidence 4999997 3 588888887763 34999999999988888763 11111111121111 1223578987743
Q ss_pred cccCCCCHHHHHHHHHhhccCCcEEEEEE
Q 018003 257 AIHCWSSPSTGVAEISRVLRPGGVFVGTT 285 (362)
Q Consensus 257 vl~h~~d~~~~l~~i~r~LkpgG~li~~~ 285 (362)
... ..+.+..+.|+|+|+++...
T Consensus 219 ----~g~--~~~~~~~~~l~~~G~iv~~G 241 (324)
T 3nx4_A 219 ----VGD--KVLAKVLAQMNYGGCVAACG 241 (324)
T ss_dssp ----SCH--HHHHHHHHTEEEEEEEEECC
T ss_pred ----CCc--HHHHHHHHHHhcCCEEEEEe
Confidence 333 27899999999999998764
No 387
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=90.68 E-value=1.5 Score=40.18 Aligned_cols=97 Identities=5% Similarity=-0.067 Sum_probs=63.6
Q ss_pred hhcCCCCC--CeEEEEcC--ccchHHHHHHHhCCCC-EEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC--
Q 018003 171 GYLKPVLG--GNIIDASC--GSGLFSRIFAKSGLFS-LVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-- 243 (362)
Q Consensus 171 ~~l~~~~~--~~vLDiGc--G~G~~~~~l~~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p-- 243 (362)
+.....++ .+||-.|+ |.|..+..+++.. +. +|+++|.+++.++.+++.+. .. .. .|.....
T Consensus 152 ~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~-Ga~~Vi~~~~~~~~~~~~~~~~g-------~~-~~--~d~~~~~~~ 220 (357)
T 2zb4_A 152 EKGHITAGSNKTMVVSGAAGACGSVAGQIGHFL-GCSRVVGICGTHEKCILLTSELG-------FD-AA--INYKKDNVA 220 (357)
T ss_dssp HHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTSC-------CS-EE--EETTTSCHH
T ss_pred HhcCCCCCCccEEEEECCCcHHHHHHHHHHHHC-CCCeEEEEeCCHHHHHHHHHHcC-------Cc-eE--EecCchHHH
Confidence 45566678 99999998 3476666666653 35 89999999887777765221 11 11 2332211
Q ss_pred -----CCCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEE
Q 018003 244 -----FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 285 (362)
Q Consensus 244 -----~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~ 285 (362)
...+.+|+|+.+-. ...++...+.|++||++++..
T Consensus 221 ~~~~~~~~~~~d~vi~~~G-------~~~~~~~~~~l~~~G~iv~~G 260 (357)
T 2zb4_A 221 EQLRESCPAGVDVYFDNVG-------GNISDTVISQMNENSHIILCG 260 (357)
T ss_dssp HHHHHHCTTCEEEEEESCC-------HHHHHHHHHTEEEEEEEEECC
T ss_pred HHHHHhcCCCCCEEEECCC-------HHHHHHHHHHhccCcEEEEEC
Confidence 11226899986554 256888999999999998754
No 388
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=90.64 E-value=1.2 Score=42.53 Aligned_cols=96 Identities=17% Similarity=0.187 Sum_probs=63.3
Q ss_pred cCCCCCCeEEEEcC-c-cchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC-------
Q 018003 173 LKPVLGGNIIDASC-G-SGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP------- 243 (362)
Q Consensus 173 l~~~~~~~vLDiGc-G-~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p------- 243 (362)
....++.+||=+|+ | .|.++..+++.. +.++++++.+++.++.+++. .. ..++...-.+..
T Consensus 224 ~~~~~g~~VlV~GasG~vG~~avqlak~~-Ga~vi~~~~~~~~~~~~~~l--------Ga-~~vi~~~~~d~~~~~~~~~ 293 (456)
T 3krt_A 224 AGMKQGDNVLIWGASGGLGSYATQFALAG-GANPICVVSSPQKAEICRAM--------GA-EAIIDRNAEGYRFWKDENT 293 (456)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHH--------TC-CEEEETTTTTCCSEEETTE
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHc-CCeEEEEECCHHHHHHHHhh--------CC-cEEEecCcCcccccccccc
Confidence 45667899999997 4 488877777763 35899999999988888763 11 112211111110
Q ss_pred ----------------CCCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEE
Q 018003 244 ----------------FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 285 (362)
Q Consensus 244 ----------------~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~ 285 (362)
.....+|+|+-.-. . ..+....++|++||++++..
T Consensus 294 ~~~~~~~~~~~~i~~~t~g~g~Dvvid~~G-----~--~~~~~~~~~l~~~G~iv~~G 344 (456)
T 3krt_A 294 QDPKEWKRFGKRIRELTGGEDIDIVFEHPG-----R--ETFGASVFVTRKGGTITTCA 344 (456)
T ss_dssp ECHHHHHHHHHHHHHHHTSCCEEEEEECSC-----H--HHHHHHHHHEEEEEEEEESC
T ss_pred cchHHHHHHHHHHHHHhCCCCCcEEEEcCC-----c--hhHHHHHHHhhCCcEEEEEe
Confidence 01246999885332 2 56888999999999998753
No 389
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=90.59 E-value=0.5 Score=43.17 Aligned_cols=95 Identities=11% Similarity=0.112 Sum_probs=62.2
Q ss_pred CCCCCCeEEEEcCcc-chHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEe----cC-CCCCCCC
Q 018003 174 KPVLGGNIIDASCGS-GLFSRIFAKSG-LFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRA----DI-SRLPFAS 246 (362)
Q Consensus 174 ~~~~~~~vLDiGcG~-G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~----d~-~~~p~~~ 246 (362)
.. ++.+||-+|+|. |.++..+++.. ++.+|+++|.+++.++.+++. . .. .++.. |. ..+. ..
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~l-G-------a~-~vi~~~~~~~~~~~~~-~g 236 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALEL-G-------AD-YVSEMKDAESLINKLT-DG 236 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHH-T-------CS-EEECHHHHHHHHHHHH-TT
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHh-C-------CC-EEeccccchHHHHHhh-cC
Confidence 45 789999999975 77777776652 135899999999988888763 1 11 11111 10 1111 12
Q ss_pred CcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEE
Q 018003 247 SSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 285 (362)
Q Consensus 247 ~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~ 285 (362)
..+|+|+-.-. . ...++...+.|+|||+++...
T Consensus 237 ~g~D~vid~~g-----~-~~~~~~~~~~l~~~G~iv~~g 269 (344)
T 2h6e_A 237 LGASIAIDLVG-----T-EETTYNLGKLLAQEGAIILVG 269 (344)
T ss_dssp CCEEEEEESSC-----C-HHHHHHHHHHEEEEEEEEECC
T ss_pred CCccEEEECCC-----C-hHHHHHHHHHhhcCCEEEEeC
Confidence 36999985432 2 236888999999999988754
No 390
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=90.45 E-value=0.91 Score=41.63 Aligned_cols=99 Identities=10% Similarity=0.010 Sum_probs=63.9
Q ss_pred hhcCCCCCCeEEEEc-Cc-cchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC-----
Q 018003 171 GYLKPVLGGNIIDAS-CG-SGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP----- 243 (362)
Q Consensus 171 ~~l~~~~~~~vLDiG-cG-~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p----- 243 (362)
+.....++.+||-+| +| .|..+..+++.. +.+|+++|.+++.++.+++. ... ..+..+-.++.
T Consensus 161 ~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~l--------Ga~-~~~~~~~~~~~~~~~~ 230 (353)
T 4dup_A 161 QMAGLTEGESVLIHGGTSGIGTTAIQLARAF-GAEVYATAGSTGKCEACERL--------GAK-RGINYRSEDFAAVIKA 230 (353)
T ss_dssp TTTCCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHH--------TCS-EEEETTTSCHHHHHHH
T ss_pred HhcCCCCCCEEEEEcCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhc--------CCC-EEEeCCchHHHHHHHH
Confidence 445567789999995 33 477777776653 34999999999988888763 111 12211111110
Q ss_pred CCCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEE
Q 018003 244 FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 286 (362)
Q Consensus 244 ~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~ 286 (362)
...+.+|+|+..-.- ..+....+.|+++|+++....
T Consensus 231 ~~~~g~Dvvid~~g~-------~~~~~~~~~l~~~G~iv~~g~ 266 (353)
T 4dup_A 231 ETGQGVDIILDMIGA-------AYFERNIASLAKDGCLSIIAF 266 (353)
T ss_dssp HHSSCEEEEEESCCG-------GGHHHHHHTEEEEEEEEECCC
T ss_pred HhCCCceEEEECCCH-------HHHHHHHHHhccCCEEEEEEe
Confidence 013469999865442 257788899999999887643
No 391
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=90.26 E-value=1.3 Score=40.64 Aligned_cols=97 Identities=8% Similarity=-0.036 Sum_probs=62.6
Q ss_pred hhcCCCCCCeEEEEcC--ccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC-----
Q 018003 171 GYLKPVLGGNIIDASC--GSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP----- 243 (362)
Q Consensus 171 ~~l~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p----- 243 (362)
+.....++.+||-.|+ |.|..+..+++.. +.+|+++|.+++.++.+++. .... . .|.....
T Consensus 156 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~--------g~~~-~--~~~~~~~~~~~~ 223 (354)
T 2j8z_A 156 LVGNVQAGDYVLIHAGLSGVGTAAIQLTRMA-GAIPLVTAGSQKKLQMAEKL--------GAAA-G--FNYKKEDFSEAT 223 (354)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHH--------TCSE-E--EETTTSCHHHHH
T ss_pred HhcCCCCCCEEEEECCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHc--------CCcE-E--EecCChHHHHHH
Confidence 3445667899999984 4577666666542 34999999999888888543 1111 1 2222211
Q ss_pred ---CCCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEE
Q 018003 244 ---FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 286 (362)
Q Consensus 244 ---~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~ 286 (362)
.....+|+|+.+-.- + .+....+.|++||+++....
T Consensus 224 ~~~~~~~~~d~vi~~~G~-----~--~~~~~~~~l~~~G~iv~~G~ 262 (354)
T 2j8z_A 224 LKFTKGAGVNLILDCIGG-----S--YWEKNVNCLALDGRWVLYGL 262 (354)
T ss_dssp HHHTTTSCEEEEEESSCG-----G--GHHHHHHHEEEEEEEEECCC
T ss_pred HHHhcCCCceEEEECCCc-----h--HHHHHHHhccCCCEEEEEec
Confidence 112469999865542 2 47778899999999987643
No 392
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=90.24 E-value=1.6 Score=40.29 Aligned_cols=95 Identities=13% Similarity=0.085 Sum_probs=58.6
Q ss_pred CCCCCeEEEEc-Cc-cchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC---CCCCcc
Q 018003 175 PVLGGNIIDAS-CG-SGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP---FASSSI 249 (362)
Q Consensus 175 ~~~~~~vLDiG-cG-~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p---~~~~~f 249 (362)
..++.+||-.| +| .|..+..+++.. +.+|++++ +++.++.+++. ... ..+..+-.++. ...+.+
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~-Ga~Vi~~~-~~~~~~~~~~l--------Ga~-~v~~~~~~~~~~~~~~~~g~ 249 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAW-DAHVTAVC-SQDASELVRKL--------GAD-DVIDYKSGSVEEQLKSLKPF 249 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEE-CGGGHHHHHHT--------TCS-EEEETTSSCHHHHHHTSCCB
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhC-CCEEEEEe-ChHHHHHHHHc--------CCC-EEEECCchHHHHHHhhcCCC
Confidence 56789999999 45 488777777653 35899998 66666666542 111 12211111110 011468
Q ss_pred eEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEE
Q 018003 250 DAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 285 (362)
Q Consensus 250 D~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~ 285 (362)
|+|+-.- ..+...+....+.|++||+++...
T Consensus 250 D~vid~~-----g~~~~~~~~~~~~l~~~G~iv~~g 280 (375)
T 2vn8_A 250 DFILDNV-----GGSTETWAPDFLKKWSGATYVTLV 280 (375)
T ss_dssp SEEEESS-----CTTHHHHGGGGBCSSSCCEEEESC
T ss_pred CEEEECC-----CChhhhhHHHHHhhcCCcEEEEeC
Confidence 9987443 344345678889999999988653
No 393
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=90.20 E-value=1.2 Score=40.16 Aligned_cols=96 Identities=16% Similarity=0.092 Sum_probs=59.7
Q ss_pred hhcCCCCCCeEEEEc-Ccc-chHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCC-CCCCCC
Q 018003 171 GYLKPVLGGNIIDAS-CGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR-LPFASS 247 (362)
Q Consensus 171 ~~l~~~~~~~vLDiG-cG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~-~p~~~~ 247 (362)
+.....++.+||=+| +|. |.++..+++.. +.+|++++ +++..+.+++. ... ..+..+-.+ +.-.-.
T Consensus 146 ~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~-Ga~vi~~~-~~~~~~~~~~l--------Ga~-~~i~~~~~~~~~~~~~ 214 (321)
T 3tqh_A 146 NQAEVKQGDVVLIHAGAGGVGHLAIQLAKQK-GTTVITTA-SKRNHAFLKAL--------GAE-QCINYHEEDFLLAIST 214 (321)
T ss_dssp HHTTCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEE-CHHHHHHHHHH--------TCS-EEEETTTSCHHHHCCS
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHc-CCEEEEEe-ccchHHHHHHc--------CCC-EEEeCCCcchhhhhcc
Confidence 556677899999997 554 88888887763 35899998 45556666653 111 122211111 111114
Q ss_pred cceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEE
Q 018003 248 SIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGT 284 (362)
Q Consensus 248 ~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~ 284 (362)
.+|+|+-.- ..+ .+....+.|+++|+++..
T Consensus 215 g~D~v~d~~-----g~~--~~~~~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 215 PVDAVIDLV-----GGD--VGIQSIDCLKETGCIVSV 244 (321)
T ss_dssp CEEEEEESS-----CHH--HHHHHGGGEEEEEEEEEC
T ss_pred CCCEEEECC-----CcH--HHHHHHHhccCCCEEEEe
Confidence 689887432 222 248889999999999865
No 394
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=89.90 E-value=0.38 Score=44.32 Aligned_cols=98 Identities=15% Similarity=0.114 Sum_probs=59.4
Q ss_pred cCCC-CCCeEEEEcCcc-chHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEe-cCCCCCCCCCcc
Q 018003 173 LKPV-LGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRA-DISRLPFASSSI 249 (362)
Q Consensus 173 l~~~-~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~-d~~~~p~~~~~f 249 (362)
.... ++.+||-+|+|. |.++..+++.. +.+|+++|.+++.++.+++.+. ... ++.. +...+.-..+.+
T Consensus 175 ~~~~~~g~~VlV~GaG~vG~~a~qlak~~-Ga~Vi~~~~~~~~~~~~~~~lG------a~~--vi~~~~~~~~~~~~~g~ 245 (357)
T 2cf5_A 175 FGLKQPGLRGGILGLGGVGHMGVKIAKAM-GHHVTVISSSNKKREEALQDLG------ADD--YVIGSDQAKMSELADSL 245 (357)
T ss_dssp TSTTSTTCEEEEECCSHHHHHHHHHHHHH-TCEEEEEESSTTHHHHHHTTSC------CSC--EEETTCHHHHHHSTTTE
T ss_pred cCCCCCCCEEEEECCCHHHHHHHHHHHHC-CCeEEEEeCChHHHHHHHHHcC------Cce--eeccccHHHHHHhcCCC
Confidence 3455 789999999875 77776766652 2499999999887777763221 111 1111 100000011368
Q ss_pred eEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEE
Q 018003 250 DAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 285 (362)
Q Consensus 250 D~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~ 285 (362)
|+|+-.-.-. ..++...++|+|||+++...
T Consensus 246 D~vid~~g~~------~~~~~~~~~l~~~G~iv~~G 275 (357)
T 2cf5_A 246 DYVIDTVPVH------HALEPYLSLLKLDGKLILMG 275 (357)
T ss_dssp EEEEECCCSC------CCSHHHHTTEEEEEEEEECS
T ss_pred CEEEECCCCh------HHHHHHHHHhccCCEEEEeC
Confidence 9998543321 12566778999999988753
No 395
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=89.59 E-value=0.43 Score=42.73 Aligned_cols=91 Identities=16% Similarity=0.066 Sum_probs=59.6
Q ss_pred CCCCCeEEEEcC--ccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCC-CCCC--CCcc
Q 018003 175 PVLGGNIIDASC--GSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR-LPFA--SSSI 249 (362)
Q Consensus 175 ~~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~-~p~~--~~~f 249 (362)
..++.+||-+|+ |.|..+..+++.. +.+|+++|.+++.++.+++. ... ..+ |... ..+. -+.+
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~--------ga~-~~~--~~~~~~~~~~~~~~~ 190 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAM-GLRVLAAASRPEKLALPLAL--------GAE-EAA--TYAEVPERAKAWGGL 190 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHT-TCEEEEEESSGGGSHHHHHT--------TCS-EEE--EGGGHHHHHHHTTSE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhc--------CCC-EEE--ECCcchhHHHHhcCc
Confidence 567899999998 3577777776653 34999999999888877652 111 112 2111 0000 0469
Q ss_pred eEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEE
Q 018003 250 DAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 285 (362)
Q Consensus 250 D~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~ 285 (362)
|+|+. -. . ..++...+.|+++|+++...
T Consensus 191 d~vid-~g-----~--~~~~~~~~~l~~~G~~v~~g 218 (302)
T 1iz0_A 191 DLVLE-VR-----G--KEVEESLGLLAHGGRLVYIG 218 (302)
T ss_dssp EEEEE-CS-----C--TTHHHHHTTEEEEEEEEEC-
T ss_pred eEEEE-CC-----H--HHHHHHHHhhccCCEEEEEe
Confidence 99986 32 2 25788899999999988754
No 396
>2akl_A PHNA-like protein PA0128; two domains, Zn binding protein, beta-strand protein, structural genomics, PSI; NMR {Pseudomonas aeruginosa PAO1} SCOP: b.34.11.2 g.41.3.5
Probab=89.57 E-value=0.16 Score=38.87 Aligned_cols=30 Identities=30% Similarity=0.729 Sum_probs=24.0
Q ss_pred eeeCCCCCCCcccccCCCCccccccCCceecCccCccccc
Q 018003 71 VLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSG 110 (362)
Q Consensus 71 ~l~CP~C~~~l~~~~~~~~~~~~~~~~~l~C~~C~~~~~~ 110 (362)
+-.||.|++...... ...+.|+.|++.+..
T Consensus 27 lP~CP~C~seytYeD----------g~l~vCPeC~hEW~~ 56 (138)
T 2akl_A 27 LPPCPQCNSEYTYED----------GALLVCPECAHEWSP 56 (138)
T ss_dssp SCCCTTTCCCCCEEC----------SSSEEETTTTEEECT
T ss_pred CCCCCCCCCcceEec----------CCeEECCccccccCC
Confidence 356999999887654 357999999999854
No 397
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=89.43 E-value=1.4 Score=39.97 Aligned_cols=96 Identities=15% Similarity=0.108 Sum_probs=62.6
Q ss_pred hcCCCCCCeEEEEcC--ccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC------
Q 018003 172 YLKPVLGGNIIDASC--GSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP------ 243 (362)
Q Consensus 172 ~l~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p------ 243 (362)
.....++.+||-.|+ |.|..+..+++.. +.+|+++|.+++.++.+++. .... . .|.....
T Consensus 140 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~-G~~Vi~~~~~~~~~~~~~~~--------g~~~-~--~d~~~~~~~~~i~ 207 (333)
T 1wly_A 140 THKVKPGDYVLIHAAAGGMGHIMVPWARHL-GATVIGTVSTEEKAETARKL--------GCHH-T--INYSTQDFAEVVR 207 (333)
T ss_dssp TSCCCTTCEEEETTTTSTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHH--------TCSE-E--EETTTSCHHHHHH
T ss_pred hhCCCCCCEEEEECCccHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc--------CCCE-E--EECCCHHHHHHHH
Confidence 445667899999995 4577666665542 24999999999888877653 1111 1 1332211
Q ss_pred --CCCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEE
Q 018003 244 --FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 286 (362)
Q Consensus 244 --~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~ 286 (362)
.....+|+|+.+..- ..++...+.|++||+++....
T Consensus 208 ~~~~~~~~d~vi~~~g~-------~~~~~~~~~l~~~G~iv~~g~ 245 (333)
T 1wly_A 208 EITGGKGVDVVYDSIGK-------DTLQKSLDCLRPRGMCAAYGH 245 (333)
T ss_dssp HHHTTCCEEEEEECSCT-------TTHHHHHHTEEEEEEEEECCC
T ss_pred HHhCCCCCeEEEECCcH-------HHHHHHHHhhccCCEEEEEec
Confidence 112369999865432 357888999999999887643
No 398
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=89.31 E-value=3.6 Score=36.42 Aligned_cols=104 Identities=12% Similarity=0.160 Sum_probs=68.3
Q ss_pred CCCeEEEEcCcc----ch-HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC-----C--
Q 018003 177 LGGNIIDASCGS----GL-FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F-- 244 (362)
Q Consensus 177 ~~~~vLDiGcG~----G~-~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p-----~-- 244 (362)
.++++|=.|++. |. ++..|++.|. +|+.++.++...+.+++..+.. .++.++.+|+.+.. +
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~Dv~d~~~v~~~~~~ 102 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREAGA--ELAFTYQGDALKKRVEPLAEEL-----GAFVAGHCDVADAASIDAVFET 102 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHTTC--EEEEEECSHHHHHHHHHHHHHH-----TCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHHHhc-----CCceEEECCCCCHHHHHHHHHH
Confidence 467899999763 32 5666777776 8999999876555555444433 46889999997642 0
Q ss_pred ---CCCcceEEEecccccC----C-----CCH--------------HHHHHHHHhhccCCcEEEEEEEc
Q 018003 245 ---ASSSIDAVHAGAAIHC----W-----SSP--------------STGVAEISRVLRPGGVFVGTTYI 287 (362)
Q Consensus 245 ---~~~~fD~V~~~~vl~h----~-----~d~--------------~~~l~~i~r~LkpgG~li~~~~~ 287 (362)
.-+..|+++.+..+.. . .++ ..+++.+.+.++.+|.++.....
T Consensus 103 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~ 171 (293)
T 3grk_A 103 LEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYY 171 (293)
T ss_dssp HHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECG
T ss_pred HHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeeh
Confidence 1247899998876542 0 111 13466677778888988876543
No 399
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=88.96 E-value=3 Score=37.16 Aligned_cols=78 Identities=22% Similarity=0.219 Sum_probs=57.7
Q ss_pred CCCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC-----C---
Q 018003 176 VLGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F--- 244 (362)
Q Consensus 176 ~~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p-----~--- 244 (362)
-.++++|=.|++.|. ++..|+++|. +|+.++.+++.++...+.+... ..++.++.+|+.+.. +
T Consensus 29 l~gk~vlVTGas~gIG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dv~d~~~v~~~~~~~ 102 (301)
T 3tjr_A 29 FDGRAAVVTGGASGIGLATATEFARRGA--RLVLSDVDQPALEQAVNGLRGQ----GFDAHGVVCDVRHLDEMVRLADEA 102 (301)
T ss_dssp STTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT----TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhc----CCceEEEEccCCCHHHHHHHHHHH
Confidence 346789999987653 4566666676 9999999999888887777665 468899999997742 0
Q ss_pred --CCCcceEEEeccccc
Q 018003 245 --ASSSIDAVHAGAAIH 259 (362)
Q Consensus 245 --~~~~fD~V~~~~vl~ 259 (362)
..+..|+++.+..+.
T Consensus 103 ~~~~g~id~lvnnAg~~ 119 (301)
T 3tjr_A 103 FRLLGGVDVVFSNAGIV 119 (301)
T ss_dssp HHHHSSCSEEEECCCCC
T ss_pred HHhCCCCCEEEECCCcC
Confidence 014689999887654
No 400
>2jrp_A Putative cytoplasmic protein; two-zinc binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium LT2}
Probab=88.91 E-value=0.21 Score=35.21 Aligned_cols=28 Identities=36% Similarity=0.904 Sum_probs=18.4
Q ss_pred eeCCCCCCCcccccCCCCccccccCCceecCccCccccc
Q 018003 72 LACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSG 110 (362)
Q Consensus 72 l~CP~C~~~l~~~~~~~~~~~~~~~~~l~C~~C~~~~~~ 110 (362)
..||.|+.++...+ +..+|..|+..|..
T Consensus 3 ~~CP~C~~~l~~~~-----------~~~~C~~C~~~~~~ 30 (81)
T 2jrp_A 3 ITCPVCHHALERNG-----------DTAHCETCAKDFSL 30 (81)
T ss_dssp CCCSSSCSCCEECS-----------SEEECTTTCCEEEE
T ss_pred CCCCCCCCccccCC-----------CceECccccccCCC
Confidence 56888888877644 35567777665544
No 401
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=88.75 E-value=0.62 Score=43.00 Aligned_cols=96 Identities=15% Similarity=0.107 Sum_probs=59.7
Q ss_pred cCCC-CCCeEEEEcCcc-chHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCC---CCCCCC
Q 018003 173 LKPV-LGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR---LPFASS 247 (362)
Q Consensus 173 l~~~-~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~---~p~~~~ 247 (362)
.... ++.+||-+|+|. |..+..+++.. +.+|++++.+++.++.+++.+. .. .++ |..+ +.-..+
T Consensus 182 ~~~~~~g~~VlV~GaG~vG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~~lG-------a~-~v~--~~~~~~~~~~~~~ 250 (366)
T 1yqd_A 182 FGLDEPGKHIGIVGLGGLGHVAVKFAKAF-GSKVTVISTSPSKKEEALKNFG-------AD-SFL--VSRDQEQMQAAAG 250 (366)
T ss_dssp TTCCCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCGGGHHHHHHTSC-------CS-EEE--ETTCHHHHHHTTT
T ss_pred cCcCCCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhcC-------Cc-eEE--eccCHHHHHHhhC
Confidence 3455 789999999875 67766666653 3499999999987777764321 11 111 2211 100113
Q ss_pred cceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEE
Q 018003 248 SIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 285 (362)
Q Consensus 248 ~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~ 285 (362)
.+|+|+..-.... .++...+.|+++|+++...
T Consensus 251 ~~D~vid~~g~~~------~~~~~~~~l~~~G~iv~~g 282 (366)
T 1yqd_A 251 TLDGIIDTVSAVH------PLLPLFGLLKSHGKLILVG 282 (366)
T ss_dssp CEEEEEECCSSCC------CSHHHHHHEEEEEEEEECC
T ss_pred CCCEEEECCCcHH------HHHHHHHHHhcCCEEEEEc
Confidence 6999986543221 2456778899999988654
No 402
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=88.73 E-value=0.79 Score=41.80 Aligned_cols=94 Identities=13% Similarity=0.134 Sum_probs=61.7
Q ss_pred hcCCCCCCeEEEEcCcc-chHHHHHHHhCCCC-EEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCC-----
Q 018003 172 YLKPVLGGNIIDASCGS-GLFSRIFAKSGLFS-LVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF----- 244 (362)
Q Consensus 172 ~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~----- 244 (362)
.... ++.+||-+|+|. |..+..+++.. +. +|+++|.+++.++.+++. .. .. .|.....+
T Consensus 160 ~~~~-~g~~VlV~GaG~vG~~~~q~a~~~-Ga~~Vi~~~~~~~~~~~~~~l-a~---------~v--~~~~~~~~~~~~~ 225 (343)
T 2dq4_A 160 GSGV-SGKSVLITGAGPIGLMAAMVVRAS-GAGPILVSDPNPYRLAFARPY-AD---------RL--VNPLEEDLLEVVR 225 (343)
T ss_dssp TTCC-TTSCEEEECCSHHHHHHHHHHHHT-TCCSEEEECSCHHHHGGGTTT-CS---------EE--ECTTTSCHHHHHH
T ss_pred hCCC-CCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHh-HH---------hc--cCcCccCHHHHHH
Confidence 4455 789999999864 77777777753 34 899999998877766542 11 11 12221110
Q ss_pred --CCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEE
Q 018003 245 --ASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 285 (362)
Q Consensus 245 --~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~ 285 (362)
....+|+|+..-. . ...++...+.|+++|+++...
T Consensus 226 ~~~~~g~D~vid~~g-----~-~~~~~~~~~~l~~~G~iv~~g 262 (343)
T 2dq4_A 226 RVTGSGVEVLLEFSG-----N-EAAIHQGLMALIPGGEARILG 262 (343)
T ss_dssp HHHSSCEEEEEECSC-----C-HHHHHHHHHHEEEEEEEEECC
T ss_pred HhcCCCCCEEEECCC-----C-HHHHHHHHHHHhcCCEEEEEe
Confidence 0236899985432 2 245788999999999988753
No 403
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=88.46 E-value=4.5 Score=32.81 Aligned_cols=91 Identities=11% Similarity=0.110 Sum_probs=57.4
Q ss_pred CCeEEEEcCcc-ch-HHHHHHHh-CCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC----C-CCCcc
Q 018003 178 GGNIIDASCGS-GL-FSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP----F-ASSSI 249 (362)
Q Consensus 178 ~~~vLDiGcG~-G~-~~~~l~~~-~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p----~-~~~~f 249 (362)
+.+|+=+|+|. |. ++..|.+. |. +|+++|.+++.++.+++ ..+..+.+|..+.. . .-..+
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~--~V~vid~~~~~~~~~~~----------~g~~~~~gd~~~~~~l~~~~~~~~a 106 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGK--ISLGIEIREEAAQQHRS----------EGRNVISGDATDPDFWERILDTGHV 106 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCS--CEEEEESCHHHHHHHHH----------TTCCEEECCTTCHHHHHTBCSCCCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCC--eEEEEECCHHHHHHHHH----------CCCCEEEcCCCCHHHHHhccCCCCC
Confidence 56899999885 54 34555555 65 89999999988777654 23556777775421 1 12458
Q ss_pred eEEEecccccCCCCHH--HHHHHHHhhccCCcEEEEEE
Q 018003 250 DAVHAGAAIHCWSSPS--TGVAEISRVLRPGGVFVGTT 285 (362)
Q Consensus 250 D~V~~~~vl~h~~d~~--~~l~~i~r~LkpgG~li~~~ 285 (362)
|+|+..- ++.. ..+-...+.+.|++.++...
T Consensus 107 d~vi~~~-----~~~~~~~~~~~~~~~~~~~~~ii~~~ 139 (183)
T 3c85_A 107 KLVLLAM-----PHHQGNQTALEQLQRRNYKGQIAAIA 139 (183)
T ss_dssp CEEEECC-----SSHHHHHHHHHHHHHTTCCSEEEEEE
T ss_pred CEEEEeC-----CChHHHHHHHHHHHHHCCCCEEEEEE
Confidence 8888642 3333 23334556667777777654
No 404
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=88.46 E-value=3.6 Score=35.54 Aligned_cols=101 Identities=23% Similarity=0.263 Sum_probs=67.8
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCC---------
Q 018003 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF--------- 244 (362)
Q Consensus 177 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~--------- 244 (362)
.++++|=.|++.|. .+..|++.|. +|+.++.+++.++...+.+ ..++.++.+|+.+..-
T Consensus 7 ~gk~~lVTGas~gIG~a~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~Dv~~~~~v~~~~~~~~ 77 (255)
T 4eso_A 7 QGKKAIVIGGTHGMGLATVRRLVEGGA--EVLLTGRNESNIARIREEF-------GPRVHALRSDIADLNEIAVLGAAAG 77 (255)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHH-------GGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHh-------CCcceEEEccCCCHHHHHHHHHHHH
Confidence 46789989987653 4555666676 9999999988777666544 2468899999976420
Q ss_pred -CCCcceEEEecccccCCC-----CHH--------------HHHHHHHhhccCCcEEEEEEE
Q 018003 245 -ASSSIDAVHAGAAIHCWS-----SPS--------------TGVAEISRVLRPGGVFVGTTY 286 (362)
Q Consensus 245 -~~~~fD~V~~~~vl~h~~-----d~~--------------~~l~~i~r~LkpgG~li~~~~ 286 (362)
.-+..|+++.+..+.... ++. .+++.+.+.++++|.++....
T Consensus 78 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS 139 (255)
T 4eso_A 78 QTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSS 139 (255)
T ss_dssp HHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECC
Confidence 114689999876654321 111 345666777778888776543
No 405
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=88.31 E-value=2.6 Score=38.33 Aligned_cols=95 Identities=13% Similarity=0.005 Sum_probs=62.8
Q ss_pred hhcCCCCCCeEEEEcC-c-cchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC-----
Q 018003 171 GYLKPVLGGNIIDASC-G-SGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP----- 243 (362)
Q Consensus 171 ~~l~~~~~~~vLDiGc-G-~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p----- 243 (362)
+.....++.+||-+|+ | .|..+..+++.. +.+|+++ .+++.++.+++. . ...+. +-.++.
T Consensus 144 ~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~-Ga~Vi~~-~~~~~~~~~~~l--------G--a~~i~-~~~~~~~~~~~ 210 (343)
T 3gaz_A 144 DRAQVQDGQTVLIQGGGGGVGHVAIQIALAR-GARVFAT-ARGSDLEYVRDL--------G--ATPID-ASREPEDYAAE 210 (343)
T ss_dssp TTTCCCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEE-ECHHHHHHHHHH--------T--SEEEE-TTSCHHHHHHH
T ss_pred HhcCCCCCCEEEEecCCCHHHHHHHHHHHHC-CCEEEEE-eCHHHHHHHHHc--------C--CCEec-cCCCHHHHHHH
Confidence 4556678999999994 4 477777777653 3499999 888888877663 1 11222 222211
Q ss_pred -CCCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEE
Q 018003 244 -FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 285 (362)
Q Consensus 244 -~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~ 285 (362)
.....+|+|+-.-. . ..+....+.|+++|+++...
T Consensus 211 ~~~~~g~D~vid~~g-----~--~~~~~~~~~l~~~G~iv~~g 246 (343)
T 3gaz_A 211 HTAGQGFDLVYDTLG-----G--PVLDASFSAVKRFGHVVSCL 246 (343)
T ss_dssp HHTTSCEEEEEESSC-----T--HHHHHHHHHEEEEEEEEESC
T ss_pred HhcCCCceEEEECCC-----c--HHHHHHHHHHhcCCeEEEEc
Confidence 12246999885432 2 46888899999999998753
No 406
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=88.19 E-value=5 Score=35.07 Aligned_cols=103 Identities=16% Similarity=0.142 Sum_probs=69.3
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCC------------HHHHHHHHHHHhhcCCCCCCCEEEEEecCCC
Q 018003 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYS------------ENMLKQCYEFVQQESNFPKENFLLVRADISR 241 (362)
Q Consensus 177 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s------------~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~ 241 (362)
.++++|=.|++.|. .+..|++.|. +|+.+|.+ .+.++.+.+.+... ..++.++.+|+.+
T Consensus 9 ~gk~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~ 82 (287)
T 3pxx_A 9 QDKVVLVTGGARGQGRSHAVKLAEEGA--DIILFDICHDIETNEYPLATSRDLEEAGLEVEKT----GRKAYTAEVDVRD 82 (287)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHT----TSCEEEEECCTTC
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC--eEEEEcccccccccccchhhhHHHHHHHHHHHhc----CCceEEEEccCCC
Confidence 46789999987653 4556666676 99999987 66666666655554 4688999999976
Q ss_pred CC-----C-----CCCcceEEEecccccCCC---CH--------------HHHHHHHHhhccCCcEEEEEE
Q 018003 242 LP-----F-----ASSSIDAVHAGAAIHCWS---SP--------------STGVAEISRVLRPGGVFVGTT 285 (362)
Q Consensus 242 ~p-----~-----~~~~fD~V~~~~vl~h~~---d~--------------~~~l~~i~r~LkpgG~li~~~ 285 (362)
.. + .-+..|+++.+..+.... +. ..+++.+.+.++.+|.++...
T Consensus 83 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 153 (287)
T 3pxx_A 83 RAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTG 153 (287)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEEC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEec
Confidence 42 0 013689999887653321 11 134566777778888877654
No 407
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=88.18 E-value=3.8 Score=35.46 Aligned_cols=106 Identities=17% Similarity=0.252 Sum_probs=69.0
Q ss_pred CCCeEEEEcCc--c--ch-HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC-----C--
Q 018003 177 LGGNIIDASCG--S--GL-FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F-- 244 (362)
Q Consensus 177 ~~~~vLDiGcG--~--G~-~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p-----~-- 244 (362)
.++++|=.|++ . |. ++..|++.|. +|+.++.++...+...+..+.. ...++.++.+|+.+.. +
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~v~~~~~~ 80 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGA--RLIFTYAGERLEKSVHELAGTL---DRNDSIILPCDVTNDAEIETCFAS 80 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTC--EEEEEESSGGGHHHHHHHHHTS---SSCCCEEEECCCSSSHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCC--EEEEecCchHHHHHHHHHHHhc---CCCCceEEeCCCCCHHHHHHHHHH
Confidence 36789999976 3 33 5666777776 8999998876666555554443 1237899999997643 0
Q ss_pred ---CCCcceEEEecccccC----C-----CCHH--------------HHHHHHHhhccCCcEEEEEEEc
Q 018003 245 ---ASSSIDAVHAGAAIHC----W-----SSPS--------------TGVAEISRVLRPGGVFVGTTYI 287 (362)
Q Consensus 245 ---~~~~fD~V~~~~vl~h----~-----~d~~--------------~~l~~i~r~LkpgG~li~~~~~ 287 (362)
..+..|+++.+..+.+ . .++. .+++.+.+.++++|.++.....
T Consensus 81 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~ 149 (266)
T 3oig_A 81 IKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYL 149 (266)
T ss_dssp HHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECG
T ss_pred HHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecc
Confidence 0146899988766533 1 1111 2456777788888988876543
No 408
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=87.94 E-value=5.5 Score=35.73 Aligned_cols=80 Identities=13% Similarity=0.186 Sum_probs=56.6
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC-----C----
Q 018003 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F---- 244 (362)
Q Consensus 177 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p-----~---- 244 (362)
.+++||=.|++.|. ++..|+++|. +|++++.+++.++...+.+... +...++.++.+|+.+.. +
T Consensus 7 ~~k~vlVTGas~gIG~~la~~l~~~G~--~Vv~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 82 (319)
T 3ioy_A 7 AGRTAFVTGGANGVGIGLVRQLLNQGC--KVAIADIRQDSIDKALATLEAE--GSGPEVMGVQLDVASREGFKMAADEVE 82 (319)
T ss_dssp TTCEEEEETTTSTHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHH--TCGGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEcCCchHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhc--CCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 36689999987653 4556666676 9999999998888777766554 11237899999997642 0
Q ss_pred -CCCcceEEEecccccC
Q 018003 245 -ASSSIDAVHAGAAIHC 260 (362)
Q Consensus 245 -~~~~fD~V~~~~vl~h 260 (362)
..+..|+++.+..+..
T Consensus 83 ~~~g~id~lv~nAg~~~ 99 (319)
T 3ioy_A 83 ARFGPVSILCNNAGVNL 99 (319)
T ss_dssp HHTCCEEEEEECCCCCC
T ss_pred HhCCCCCEEEECCCcCC
Confidence 1246899998877543
No 409
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=87.72 E-value=9.4 Score=33.10 Aligned_cols=70 Identities=9% Similarity=0.137 Sum_probs=49.9
Q ss_pred CeEEEEcCccchHHHHHHH----hCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCCCCcceEEEe
Q 018003 179 GNIIDASCGSGLFSRIFAK----SGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHA 254 (362)
Q Consensus 179 ~~vLDiGcG~G~~~~~l~~----~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~~~~fD~V~~ 254 (362)
++||=.|+ |..+..+++ +|. +|++++-++........ .++.++.+|+.++. ...+|+|+.
T Consensus 6 ~~ilVtGa--G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~----------~~~~~~~~D~~d~~--~~~~d~vi~ 69 (286)
T 3ius_A 6 GTLLSFGH--GYTARVLSRALAPQGW--RIIGTSRNPDQMEAIRA----------SGAEPLLWPGEEPS--LDGVTHLLI 69 (286)
T ss_dssp CEEEEETC--CHHHHHHHHHHGGGTC--EEEEEESCGGGHHHHHH----------TTEEEEESSSSCCC--CTTCCEEEE
T ss_pred CcEEEECC--cHHHHHHHHHHHHCCC--EEEEEEcChhhhhhHhh----------CCCeEEEecccccc--cCCCCEEEE
Confidence 58999995 666655554 455 99999998865544332 47899999998866 456899998
Q ss_pred cccccCCCCH
Q 018003 255 GAAIHCWSSP 264 (362)
Q Consensus 255 ~~vl~h~~d~ 264 (362)
........++
T Consensus 70 ~a~~~~~~~~ 79 (286)
T 3ius_A 70 STAPDSGGDP 79 (286)
T ss_dssp CCCCBTTBCH
T ss_pred CCCccccccH
Confidence 7765544444
No 410
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=87.61 E-value=5.4 Score=35.22 Aligned_cols=103 Identities=20% Similarity=0.248 Sum_probs=66.4
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHH-HHHHHHHHHhhcCCCCCCCEEEEEecCCCCC-----C---
Q 018003 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSEN-MLKQCYEFVQQESNFPKENFLLVRADISRLP-----F--- 244 (362)
Q Consensus 177 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~-~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p-----~--- 244 (362)
.++++|=.|++.|. ++..|++.|. +|+.++.+.. ..+...+.++.. ..++.++.+|+.+.. +
T Consensus 46 ~gk~vlVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~Dv~d~~~v~~~~~~~ 119 (291)
T 3ijr_A 46 KGKNVLITGGDSGIGRAVSIAFAKEGA--NIAIAYLDEEGDANETKQYVEKE----GVKCVLLPGDLSDEQHCKDIVQET 119 (291)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHTT----TCCEEEEESCTTSHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCchHHHHHHHHHHHhc----CCcEEEEECCCCCHHHHHHHHHHH
Confidence 36789999987653 4556666675 8999998765 344444444443 467889999997642 0
Q ss_pred --CCCcceEEEecccccCCC------CH--------------HHHHHHHHhhccCCcEEEEEE
Q 018003 245 --ASSSIDAVHAGAAIHCWS------SP--------------STGVAEISRVLRPGGVFVGTT 285 (362)
Q Consensus 245 --~~~~fD~V~~~~vl~h~~------d~--------------~~~l~~i~r~LkpgG~li~~~ 285 (362)
.-+..|+++.+....+.. +. ..+++.+.+.++.+|.++...
T Consensus 120 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~is 182 (291)
T 3ijr_A 120 VRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTA 182 (291)
T ss_dssp HHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEEC
T ss_pred HHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEe
Confidence 114689999875543211 11 135667777888889877654
No 411
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=87.55 E-value=4.9 Score=34.59 Aligned_cols=78 Identities=10% Similarity=0.117 Sum_probs=56.8
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC-----CC---
Q 018003 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----FA--- 245 (362)
Q Consensus 177 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p-----~~--- 245 (362)
.++++|=.|++.|. ++..|++.|. +|+.++.+++.++...+.+... ..++.++.+|+.+.. +.
T Consensus 6 ~~k~vlVTGas~GIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~ 79 (252)
T 3h7a_A 6 RNATVAVIGAGDYIGAEIAKKFAAEGF--TVFAGRRNGEKLAPLVAEIEAA----GGRIVARSLDARNEDEVTAFLNAAD 79 (252)
T ss_dssp CSCEEEEECCSSHHHHHHHHHHHHTTC--EEEEEESSGGGGHHHHHHHHHT----TCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc----CCeEEEEECcCCCHHHHHHHHHHHH
Confidence 35688888887663 4566666676 9999999998888777777665 467899999997642 00
Q ss_pred -CCcceEEEecccccC
Q 018003 246 -SSSIDAVHAGAAIHC 260 (362)
Q Consensus 246 -~~~fD~V~~~~vl~h 260 (362)
.+..|+++.+..+..
T Consensus 80 ~~g~id~lv~nAg~~~ 95 (252)
T 3h7a_A 80 AHAPLEVTIFNVGANV 95 (252)
T ss_dssp HHSCEEEEEECCCCCC
T ss_pred hhCCceEEEECCCcCC
Confidence 157899998876543
No 412
>1qyp_A RNA polymerase II; transcription, RPB9, Zn ribbon, hyperthermophilic, extremophIle; NMR {Thermococcus celer} SCOP: g.41.3.1
Probab=87.36 E-value=0.24 Score=32.52 Aligned_cols=40 Identities=18% Similarity=0.503 Sum_probs=22.8
Q ss_pred eeeCCCCCCCcc-cccCCCCccccccCCceecCccCccccc
Q 018003 71 VLACPICYKPLT-WIGDSSLSIESAAGSSLQCNTCKKTYSG 110 (362)
Q Consensus 71 ~l~CP~C~~~l~-~~~~~~~~~~~~~~~~l~C~~C~~~~~~ 110 (362)
...||.|+..-. .....-...+..+...+.|.+|++.+..
T Consensus 15 ~~~Cp~Cg~~~~~~~q~Q~rsadep~T~fy~C~~Cg~~w~~ 55 (57)
T 1qyp_A 15 KITCPKCGNDTAYWWEMQTRAGDEPSTIFYKCTKCGHTWRS 55 (57)
T ss_dssp ECCCTTTCCSEEEEEEECCSSSSCSSEEEEEESSSCCEEEC
T ss_pred EeECCCCCCCEEEEEEeecccCCCCCcEEEEcCCCCCEecc
Confidence 577999998321 1111111223333457899999987643
No 413
>3j21_g 50S ribosomal protein L40E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=87.23 E-value=0.27 Score=31.42 Aligned_cols=29 Identities=14% Similarity=0.236 Sum_probs=22.4
Q ss_pred ccCCeeeCCCCCCCcccccCCCCccccccCCceecCccCccc
Q 018003 67 TSKNVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTY 108 (362)
Q Consensus 67 ~~~~~l~CP~C~~~l~~~~~~~~~~~~~~~~~l~C~~C~~~~ 108 (362)
.......||.|++.+. .+.+.|..||+..
T Consensus 10 r~~~k~iCpkC~a~~~-------------~gaw~CrKCG~~~ 38 (51)
T 3j21_g 10 RIFKKYVCLRCGATNP-------------WGAKKCRKCGYKR 38 (51)
T ss_dssp HSSSEEECTTTCCEEC-------------TTCSSCSSSSSCC
T ss_pred HHhCCccCCCCCCcCC-------------CCceecCCCCCcc
Confidence 3457789999998732 2689999999873
No 414
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=86.99 E-value=4.6 Score=37.34 Aligned_cols=113 Identities=10% Similarity=0.059 Sum_probs=69.7
Q ss_pred HHHHhhcCC-CCCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCC
Q 018003 167 ELMKGYLKP-VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 245 (362)
Q Consensus 167 ~~l~~~l~~-~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~ 245 (362)
+.|++.+.. ..+++||.++.+.|.++..++... ++.+.-|--.....+.+++.+ +....++.+.. ..+.+
T Consensus 27 ~~ll~~~~~~~~~~~~~~~~d~~gal~~~~~~~~----~~~~~ds~~~~~~~~~n~~~~-~~~~~~~~~~~-~~~~~--- 97 (375)
T 4dcm_A 27 EYLLQQLDDTEIRGPVLILNDAFGALSCALAEHK----PYSIGDSYISELATRENLRLN-GIDESSVKFLD-STADY--- 97 (375)
T ss_dssp HHHHHTTTTCCCCSCEEEECCSSSHHHHHTGGGC----CEEEESCHHHHHHHHHHHHHT-TCCGGGSEEEE-TTSCC---
T ss_pred HHHHHhhhhccCCCCEEEECCCCCHHHHhhccCC----ceEEEhHHHHHHHHHHHHHHc-CCCccceEecc-ccccc---
Confidence 455655433 245789999999999998887543 345543555555556666665 22222355432 22222
Q ss_pred CCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEEEccC
Q 018003 246 SSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVD 289 (362)
Q Consensus 246 ~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~~~~ 289 (362)
.+.+|+|+.... .+.......|..+...|+||+.+++..-+..
T Consensus 98 ~~~~~~v~~~lp-k~~~~l~~~L~~l~~~l~~~~~i~~~g~~~~ 140 (375)
T 4dcm_A 98 PQQPGVVLIKVP-KTLALLEQQLRALRKVVTSDTRIIAGAKARD 140 (375)
T ss_dssp CSSCSEEEEECC-SCHHHHHHHHHHHHTTCCTTSEEEEEEEGGG
T ss_pred ccCCCEEEEEcC-CCHHHHHHHHHHHHhhCCCCCEEEEEecccc
Confidence 356999886332 2222234668888899999999988776543
No 415
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=86.92 E-value=6.1 Score=34.31 Aligned_cols=105 Identities=19% Similarity=0.225 Sum_probs=68.9
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeC-CHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC-----C---
Q 018003 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDY-SENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F--- 244 (362)
Q Consensus 177 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~-s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p-----~--- 244 (362)
.++++|=.|++.|. ++..|++.|. +|+.++. +.+.++...+.+... ..++.++.+|+.+.. +
T Consensus 17 ~~k~~lVTGas~gIG~aia~~l~~~G~--~V~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~ 90 (270)
T 3is3_A 17 DGKVALVTGSGRGIGAAVAVHLGRLGA--KVVVNYANSTKDAEKVVSEIKAL----GSDAIAIKADIRQVPEIVKLFDQA 90 (270)
T ss_dssp TTCEEEESCTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHT----TCCEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhc----CCcEEEEEcCCCCHHHHHHHHHHH
Confidence 46788888877653 4556666676 8888775 455555555555554 467899999997642 0
Q ss_pred --CCCcceEEEecccccCCC-----CH--------------HHHHHHHHhhccCCcEEEEEEEc
Q 018003 245 --ASSSIDAVHAGAAIHCWS-----SP--------------STGVAEISRVLRPGGVFVGTTYI 287 (362)
Q Consensus 245 --~~~~fD~V~~~~vl~h~~-----d~--------------~~~l~~i~r~LkpgG~li~~~~~ 287 (362)
.-+..|+++.+..+.+.. ++ ..+++.+.+.++++|.++.....
T Consensus 91 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~ 154 (270)
T 3is3_A 91 VAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSN 154 (270)
T ss_dssp HHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCT
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCc
Confidence 013689999876654332 11 13467777888889988876543
No 416
>3cc2_Z 50S ribosomal protein L37AE, 50S ribosomal protein L32E; genomic sequnece for R-proteins, ribonucleoprotein, ribosoma protein, RNA-binding; HET: 1MA OMU OMG UR3 PSU; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 3cc4_Z* 3cc7_Z* 3cce_Z* 3ccj_Z* 3ccl_Z* 3ccm_Z* 3ccq_Z* 3ccr_Z* 3ccs_Z* 3ccu_Z* 3ccv_Z* 3cd6_Z* 3cma_Z* 3cme_Z* 3i55_Z* 3i56_Z* 3cpw_Y* 4adx_Z
Probab=86.89 E-value=0.27 Score=37.07 Aligned_cols=32 Identities=25% Similarity=0.580 Sum_probs=23.0
Q ss_pred CCeeeCCCCCCC-cccccCCCCccccccCCceecCccCccccc
Q 018003 69 KNVLACPICYKP-LTWIGDSSLSIESAAGSSLQCNTCKKTYSG 110 (362)
Q Consensus 69 ~~~l~CP~C~~~-l~~~~~~~~~~~~~~~~~l~C~~C~~~~~~ 110 (362)
-....||.|+.. +... ..++++|..|+..+..
T Consensus 58 ~akytCPfCGk~~vKR~----------avGIW~C~~Cgk~fAG 90 (116)
T 3cc2_Z 58 NEDHACPNCGEDRVDRQ----------GTGIWQCSYCDYKFTG 90 (116)
T ss_dssp HSCEECSSSCCEEEEEE----------ETTEEEETTTCCEEEC
T ss_pred ccCCcCCCCCCceeEec----------CceeEECCCCCCEEEC
Confidence 356889999973 2221 2379999999988765
No 417
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=86.69 E-value=5 Score=30.86 Aligned_cols=90 Identities=18% Similarity=0.161 Sum_probs=55.9
Q ss_pred CCeEEEEcCcc-ch-HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC----CCCCcceE
Q 018003 178 GGNIIDASCGS-GL-FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP----FASSSIDA 251 (362)
Q Consensus 178 ~~~vLDiGcG~-G~-~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p----~~~~~fD~ 251 (362)
..+|+=+|+|. |. +...|.+.|. +|+++|.+++.++.+++ ..+.++.+|..+.. ..-..+|+
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~--~V~~id~~~~~~~~~~~----------~~~~~~~gd~~~~~~l~~~~~~~~d~ 73 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGK--KVLAVDKSKEKIELLED----------EGFDAVIADPTDESFYRSLDLEGVSA 73 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC--CEEEEESCHHHHHHHHH----------TTCEEEECCTTCHHHHHHSCCTTCSE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC--eEEEEECCHHHHHHHHH----------CCCcEEECCCCCHHHHHhCCcccCCE
Confidence 35799999975 33 3444555565 89999999988877765 24677888886632 12246888
Q ss_pred EEecccccCCCCHH--HHHHHHHhhccCCcEEEEEE
Q 018003 252 VHAGAAIHCWSSPS--TGVAEISRVLRPGGVFVGTT 285 (362)
Q Consensus 252 V~~~~vl~h~~d~~--~~l~~i~r~LkpgG~li~~~ 285 (362)
|+..-. +.. ..+....+.+. ...++...
T Consensus 74 vi~~~~-----~~~~n~~~~~~a~~~~-~~~iia~~ 103 (141)
T 3llv_A 74 VLITGS-----DDEFNLKILKALRSVS-DVYAIVRV 103 (141)
T ss_dssp EEECCS-----CHHHHHHHHHHHHHHC-CCCEEEEE
T ss_pred EEEecC-----CHHHHHHHHHHHHHhC-CceEEEEE
Confidence 876432 332 33444445555 55555544
No 418
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=86.65 E-value=4.9 Score=38.53 Aligned_cols=72 Identities=18% Similarity=0.178 Sum_probs=50.9
Q ss_pred HHHHHHhhcCCC------CCCeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEec
Q 018003 165 EFELMKGYLKPV------LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRAD 238 (362)
Q Consensus 165 ~~~~l~~~l~~~------~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d 238 (362)
++..+...++.. ...+++|+=||.|.+...+.+.|. ..+.++|+++.+.+..+.++.. .+...++.+|
T Consensus 69 ~~~~l~~~~~~~p~~~~~~~~~viDLFaG~GGlslG~~~aG~-~~v~avE~d~~A~~ty~~N~~~-----~p~~~~~~~D 142 (482)
T 3me5_A 69 EFAHLQTLLPKPPEHHPHYAFRFIDLFAGIGGIRRGFESIGG-QCVFTSEWNKHAVRTYKANHYC-----DPATHHFNED 142 (482)
T ss_dssp HHHHHHTTSCCCCTTTTCCSEEEEEESCTTSHHHHHHHTTTE-EEEEEECCCHHHHHHHHHHSCC-----CTTTCEEESC
T ss_pred HHHHHHhhCCCCCccCCCccceEEEecCCccHHHHHHHHCCC-EEEEEEeCCHHHHHHHHHhccc-----CCCcceeccc
Confidence 345566555432 235899999999999999988875 3488999999888877765321 1344567788
Q ss_pred CCCC
Q 018003 239 ISRL 242 (362)
Q Consensus 239 ~~~~ 242 (362)
+..+
T Consensus 143 I~~i 146 (482)
T 3me5_A 143 IRDI 146 (482)
T ss_dssp THHH
T ss_pred hhhh
Confidence 7654
No 419
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=86.65 E-value=1.3 Score=40.05 Aligned_cols=96 Identities=14% Similarity=0.081 Sum_probs=59.1
Q ss_pred CCCCCC-eEEEEcC--ccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecC-CC--CCCCCC
Q 018003 174 KPVLGG-NIIDASC--GSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADI-SR--LPFASS 247 (362)
Q Consensus 174 ~~~~~~-~vLDiGc--G~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~-~~--~p~~~~ 247 (362)
...++. +||-+|+ |.|..+..+++.. +.++++++.+++.++.+++. . ....+-..+. .. .....+
T Consensus 145 ~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~-Ga~vi~~~~~~~~~~~~~~l-G-------a~~~i~~~~~~~~~~~~~~~~ 215 (328)
T 1xa0_A 145 GLTPERGPVLVTGATGGVGSLAVSMLAKR-GYTVEASTGKAAEHDYLRVL-G-------AKEVLAREDVMAERIRPLDKQ 215 (328)
T ss_dssp TCCGGGCCEEESSTTSHHHHHHHHHHHHT-TCCEEEEESCTTCHHHHHHT-T-------CSEEEECC---------CCSC
T ss_pred CCCCCCceEEEecCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHc-C-------CcEEEecCCcHHHHHHHhcCC
Confidence 445564 8999997 4588777777653 34899999998888877652 1 1111111111 00 011234
Q ss_pred cceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEE
Q 018003 248 SIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 285 (362)
Q Consensus 248 ~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~ 285 (362)
.+|+|+-.-. . ..+....+.|++||++++..
T Consensus 216 ~~d~vid~~g-----~--~~~~~~~~~l~~~G~~v~~G 246 (328)
T 1xa0_A 216 RWAAAVDPVG-----G--RTLATVLSRMRYGGAVAVSG 246 (328)
T ss_dssp CEEEEEECST-----T--TTHHHHHHTEEEEEEEEECS
T ss_pred cccEEEECCc-----H--HHHHHHHHhhccCCEEEEEe
Confidence 6999875432 2 24778889999999988753
No 420
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=86.64 E-value=1.6 Score=39.34 Aligned_cols=96 Identities=11% Similarity=0.087 Sum_probs=60.0
Q ss_pred CCCCCC-eEEEEcC-c-cchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecC--CCC-CCCCC
Q 018003 174 KPVLGG-NIIDASC-G-SGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADI--SRL-PFASS 247 (362)
Q Consensus 174 ~~~~~~-~vLDiGc-G-~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~--~~~-p~~~~ 247 (362)
...++. +||-+|+ | .|..+..+++.. +.++++++.+++.++.+++. . ....+-..+. ... ....+
T Consensus 146 ~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~-Ga~vi~~~~~~~~~~~~~~l-G-------a~~v~~~~~~~~~~~~~~~~~ 216 (330)
T 1tt7_A 146 GLSPEKGSVLVTGATGGVGGIAVSMLNKR-GYDVVASTGNREAADYLKQL-G-------ASEVISREDVYDGTLKALSKQ 216 (330)
T ss_dssp TCCGGGCCEEEESTTSHHHHHHHHHHHHH-TCCEEEEESSSSTHHHHHHH-T-------CSEEEEHHHHCSSCCCSSCCC
T ss_pred CcCCCCceEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc-C-------CcEEEECCCchHHHHHHhhcC
Confidence 445564 8999997 3 477777766652 24899999998878877653 1 1111111111 111 12234
Q ss_pred cceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEE
Q 018003 248 SIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 285 (362)
Q Consensus 248 ~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~ 285 (362)
.+|+|+-.- .. ..+.+..+.|++||++++..
T Consensus 217 ~~d~vid~~-----g~--~~~~~~~~~l~~~G~iv~~G 247 (330)
T 1tt7_A 217 QWQGAVDPV-----GG--KQLASLLSKIQYGGSVAVSG 247 (330)
T ss_dssp CEEEEEESC-----CT--HHHHHHHTTEEEEEEEEECC
T ss_pred CccEEEECC-----cH--HHHHHHHHhhcCCCEEEEEe
Confidence 689887543 33 36888999999999998754
No 421
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=86.58 E-value=6.9 Score=34.39 Aligned_cols=78 Identities=13% Similarity=0.200 Sum_probs=55.2
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCC-C----C----
Q 018003 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-P----F---- 244 (362)
Q Consensus 177 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~-p----~---- 244 (362)
.++++|=.|++.|. ++..|++.|. +|++++.++...+.+.+.+... ...++.++.+|+.+. . +
T Consensus 11 ~~k~vlITGas~GIG~~~a~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~Dl~~~~~~v~~~~~~~ 85 (311)
T 3o26_A 11 KRRCAVVTGGNKGIGFEICKQLSSNGI--MVVLTCRDVTKGHEAVEKLKNS---NHENVVFHQLDVTDPIATMSSLADFI 85 (311)
T ss_dssp -CCEEEESSCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHTT---TCCSEEEEECCTTSCHHHHHHHHHHH
T ss_pred CCcEEEEecCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc---CCCceEEEEccCCCcHHHHHHHHHHH
Confidence 35688888877653 4555666665 9999999998877777766554 235799999999775 2 0
Q ss_pred --CCCcceEEEeccccc
Q 018003 245 --ASSSIDAVHAGAAIH 259 (362)
Q Consensus 245 --~~~~fD~V~~~~vl~ 259 (362)
..+..|+++.+..+.
T Consensus 86 ~~~~g~iD~lv~nAg~~ 102 (311)
T 3o26_A 86 KTHFGKLDILVNNAGVA 102 (311)
T ss_dssp HHHHSSCCEEEECCCCC
T ss_pred HHhCCCCCEEEECCccc
Confidence 014699999887654
No 422
>2k4x_A 30S ribosomal protein S27AE; metal-binding, ribonucleoprotein, zinc, zinc-finger, structural genomics, PSI-2; NMR {Thermoplasma acidophilum} SCOP: g.41.8.8
Probab=86.55 E-value=0.43 Score=31.11 Aligned_cols=31 Identities=19% Similarity=0.312 Sum_probs=21.9
Q ss_pred eeeCCCCCCCcccccCCCCccccccCCceecCccCccccc
Q 018003 71 VLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSG 110 (362)
Q Consensus 71 ~l~CP~C~~~l~~~~~~~~~~~~~~~~~l~C~~C~~~~~~ 110 (362)
+..||.||+.+.... ....+.|..|+..+..
T Consensus 18 ~~fCPkCG~~~~ma~---------~~dr~~C~kCgyt~~~ 48 (55)
T 2k4x_A 18 HRFCPRCGPGVFLAE---------HADRYSCGRCGYTEFK 48 (55)
T ss_dssp SCCCTTTTTTCCCEE---------CSSEEECTTTCCCEEC
T ss_pred cccCcCCCCceeEec---------cCCEEECCCCCCEEEe
Confidence 567999998654322 1258999999987643
No 423
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=86.42 E-value=3.6 Score=38.87 Aligned_cols=97 Identities=21% Similarity=0.172 Sum_probs=62.2
Q ss_pred cCCCCCCeEEEEcC-c-cchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEe--cCCCC------
Q 018003 173 LKPVLGGNIIDASC-G-SGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRA--DISRL------ 242 (362)
Q Consensus 173 l~~~~~~~vLDiGc-G-~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~--d~~~~------ 242 (362)
....++.+||-.|+ | .|..+..+++.. +.++++++.+++.++.+++. .....+... |+...
T Consensus 216 ~~~~~g~~VlV~GasG~iG~~a~qla~~~-Ga~vi~~~~~~~~~~~~~~l--------Ga~~~i~~~~~~~~~~~~~~~~ 286 (447)
T 4a0s_A 216 AQMKQGDIVLIWGASGGLGSYAIQFVKNG-GGIPVAVVSSAQKEAAVRAL--------GCDLVINRAELGITDDIADDPR 286 (447)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHT--------TCCCEEEHHHHTCCTTGGGCHH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhc--------CCCEEEeccccccccccccccc
Confidence 45667999999997 4 477777777653 35999999999888888652 111111111 11000
Q ss_pred --------------CCCCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEE
Q 018003 243 --------------PFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 285 (362)
Q Consensus 243 --------------p~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~ 285 (362)
......+|+|+..-. . ..++...+.|++||+++...
T Consensus 287 ~~~~~~~~~~~~v~~~~g~g~Dvvid~~G-----~--~~~~~~~~~l~~~G~iv~~G 336 (447)
T 4a0s_A 287 RVVETGRKLAKLVVEKAGREPDIVFEHTG-----R--VTFGLSVIVARRGGTVVTCG 336 (447)
T ss_dssp HHHHHHHHHHHHHHHHHSSCCSEEEECSC-----H--HHHHHHHHHSCTTCEEEESC
T ss_pred ccchhhhHHHHHHHHHhCCCceEEEECCC-----c--hHHHHHHHHHhcCCEEEEEe
Confidence 001246899986443 2 35788889999999998754
No 424
>3jyw_9 60S ribosomal protein L43; eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus}
Probab=86.31 E-value=0.48 Score=32.59 Aligned_cols=32 Identities=31% Similarity=0.572 Sum_probs=22.4
Q ss_pred CeeeCCCCCCCcccccCCCCccccccCCceecCccCccccc
Q 018003 70 NVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSG 110 (362)
Q Consensus 70 ~~l~CP~C~~~l~~~~~~~~~~~~~~~~~l~C~~C~~~~~~ 110 (362)
....||.|+..-.. . ...++++|..|+..+..
T Consensus 25 ~ky~C~fCgk~~vk-R--------~a~GIW~C~~C~~~~AG 56 (72)
T 3jyw_9 25 ARYDCSFCGKKTVK-R--------GAAGIWTCSCCKKTVAG 56 (72)
T ss_dssp SCBCCSSCCSSCBS-B--------CSSSCBCCSSSCCCCCC
T ss_pred cCccCCCCCCceeE-e--------cCCCeEECCCCCCEEeC
Confidence 45789999975221 1 22479999999987654
No 425
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=86.24 E-value=4.7 Score=36.25 Aligned_cols=91 Identities=14% Similarity=0.192 Sum_probs=58.6
Q ss_pred CCeEEEEcCcc--chHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCCCCcceEEEec
Q 018003 178 GGNIIDASCGS--GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAG 255 (362)
Q Consensus 178 ~~~vLDiGcG~--G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~~~~fD~V~~~ 255 (362)
..+|.=||+|. +.++..+.+.|...+|+++|.+++.++.+.+. .-+.-...|..+. .-...|+|+..
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~---------G~~~~~~~~~~~~--~~~~aDvVila 101 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDL---------GIIDEGTTSIAKV--EDFSPDFVMLS 101 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHT---------TSCSEEESCTTGG--GGGCCSEEEEC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHC---------CCcchhcCCHHHH--hhccCCEEEEe
Confidence 35899999986 45667777777545899999999888777652 1111122333320 12347888865
Q ss_pred ccccCCCCHHHHHHHHHhhccCCcEEE
Q 018003 256 AAIHCWSSPSTGVAEISRVLRPGGVFV 282 (362)
Q Consensus 256 ~vl~h~~d~~~~l~~i~r~LkpgG~li 282 (362)
--.. ....+++++...|+||.+++
T Consensus 102 vp~~---~~~~vl~~l~~~l~~~~iv~ 125 (314)
T 3ggo_A 102 SPVR---TFREIAKKLSYILSEDATVT 125 (314)
T ss_dssp SCGG---GHHHHHHHHHHHSCTTCEEE
T ss_pred CCHH---HHHHHHHHHhhccCCCcEEE
Confidence 3322 23567888999999987654
No 426
>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...
Probab=86.19 E-value=0.31 Score=33.48 Aligned_cols=29 Identities=17% Similarity=0.495 Sum_probs=21.9
Q ss_pred cCCeeeCCCCCCCcccccCCCCccccccCCceecCccCc
Q 018003 68 SKNVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKK 106 (362)
Q Consensus 68 ~~~~l~CP~C~~~l~~~~~~~~~~~~~~~~~l~C~~C~~ 106 (362)
....+.|+.||..+.... ....+|+.||+
T Consensus 25 ~~v~Y~C~~CG~~~e~~~----------~d~irCp~CG~ 53 (70)
T 1twf_L 25 ATLKYICAECSSKLSLSR----------TDAVRCKDCGH 53 (70)
T ss_dssp CCCCEECSSSCCEECCCT----------TSTTCCSSSCC
T ss_pred ceEEEECCCCCCcceeCC----------CCCccCCCCCc
Confidence 346688999999866543 24679999998
No 427
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=86.15 E-value=10 Score=32.17 Aligned_cols=76 Identities=16% Similarity=0.142 Sum_probs=55.3
Q ss_pred CCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC----------C
Q 018003 178 GGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP----------F 244 (362)
Q Consensus 178 ~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p----------~ 244 (362)
++++|=.|++.|. ++..+++.|. +|+.++.++..++...+.++.. ..++.++.+|+.+.. -
T Consensus 5 ~k~vlITGas~gIG~~~a~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~ 78 (247)
T 3lyl_A 5 EKVALVTGASRGIGFEVAHALASKGA--TVVGTATSQASAEKFENSMKEK----GFKARGLVLNISDIESIQNFFAEIKA 78 (247)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHHHT----TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc----CCceEEEEecCCCHHHHHHHHHHHHH
Confidence 5678888876552 4566666675 9999999998888777776665 467899999997642 1
Q ss_pred CCCcceEEEeccccc
Q 018003 245 ASSSIDAVHAGAAIH 259 (362)
Q Consensus 245 ~~~~fD~V~~~~vl~ 259 (362)
..+..|+++.+..+.
T Consensus 79 ~~~~id~li~~Ag~~ 93 (247)
T 3lyl_A 79 ENLAIDILVNNAGIT 93 (247)
T ss_dssp TTCCCSEEEECCCCC
T ss_pred HcCCCCEEEECCCCC
Confidence 124689999887654
No 428
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=85.89 E-value=5.9 Score=34.14 Aligned_cols=78 Identities=15% Similarity=0.152 Sum_probs=56.6
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC-----C----
Q 018003 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F---- 244 (362)
Q Consensus 177 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p-----~---- 244 (362)
.++++|=.|++.|. +...|++.|. +|+.+|.+++.++...+.+... ..++.++.+|+.+.. +
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dv~d~~~v~~~~~~~~ 84 (256)
T 3gaf_A 11 NDAVAIVTGAAAGIGRAIAGTFAKAGA--SVVVTDLKSEGAEAVAAAIRQA----GGKAIGLECNVTDEQHREAVIKAAL 84 (256)
T ss_dssp TTCEEEECSCSSHHHHHHHHHHHHHTC--EEEEEESSHHHHHHHHHHHHHT----TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc----CCcEEEEECCCCCHHHHHHHHHHHH
Confidence 36788888887653 4566667776 8999999998888777776655 468899999997642 0
Q ss_pred -CCCcceEEEecccccC
Q 018003 245 -ASSSIDAVHAGAAIHC 260 (362)
Q Consensus 245 -~~~~fD~V~~~~vl~h 260 (362)
.-+..|+++.+..+..
T Consensus 85 ~~~g~id~lv~nAg~~~ 101 (256)
T 3gaf_A 85 DQFGKITVLVNNAGGGG 101 (256)
T ss_dssp HHHSCCCEEEECCCCCC
T ss_pred HHcCCCCEEEECCCCCC
Confidence 0136899998876543
No 429
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=85.85 E-value=9.1 Score=33.31 Aligned_cols=104 Identities=17% Similarity=0.178 Sum_probs=68.2
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCC-HHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC-----C---
Q 018003 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYS-ENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F--- 244 (362)
Q Consensus 177 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s-~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p-----~--- 244 (362)
.++++|=.|++.|. ++..|++.|. +|+.++.. .+..+...+.++.. ..++.++.+|+.+.. +
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~Dv~d~~~v~~~~~~~ 103 (271)
T 3v2g_A 30 AGKTAFVTGGSRGIGAAIAKRLALEGA--AVALTYVNAAERAQAVVSEIEQA----GGRAVAIRADNRDAEAIEQAIRET 103 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHT----TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCCHHHHHHHHHHHHhc----CCcEEEEECCCCCHHHHHHHHHHH
Confidence 46789999987653 4566666676 88888654 45555555555544 467889999997642 0
Q ss_pred --CCCcceEEEecccccCCC-----CH--------------HHHHHHHHhhccCCcEEEEEEE
Q 018003 245 --ASSSIDAVHAGAAIHCWS-----SP--------------STGVAEISRVLRPGGVFVGTTY 286 (362)
Q Consensus 245 --~~~~fD~V~~~~vl~h~~-----d~--------------~~~l~~i~r~LkpgG~li~~~~ 286 (362)
.-+..|+++.+..+.... ++ ..+++.+.+.++++|.++....
T Consensus 104 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS 166 (271)
T 3v2g_A 104 VEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGS 166 (271)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred HHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeC
Confidence 113689999887653321 11 1356777788888898877644
No 430
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=85.50 E-value=3.4 Score=36.63 Aligned_cols=104 Identities=18% Similarity=0.157 Sum_probs=67.5
Q ss_pred CCCeEEEEcCc----cch-HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC-----C--
Q 018003 177 LGGNIIDASCG----SGL-FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F-- 244 (362)
Q Consensus 177 ~~~~vLDiGcG----~G~-~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p-----~-- 244 (362)
.++++|=.|++ .|. ++..|++.|. +|+.++.++...+...+..+.. ..+.++.+|+.+.. +
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~Dv~d~~~v~~~~~~ 101 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQGA--EVALTYLSETFKKRVDPLAESL-----GVKLTVPCDVSDAESVDNMFKV 101 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTC--EEEEEESSGGGHHHHHHHHHHH-----TCCEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHhc-----CCeEEEEcCCCCHHHHHHHHHH
Confidence 36789999975 343 5666677776 8999999976555555544443 34678899997642 0
Q ss_pred ---CCCcceEEEecccccCC---------CCH--------------HHHHHHHHhhccCCcEEEEEEEc
Q 018003 245 ---ASSSIDAVHAGAAIHCW---------SSP--------------STGVAEISRVLRPGGVFVGTTYI 287 (362)
Q Consensus 245 ---~~~~fD~V~~~~vl~h~---------~d~--------------~~~l~~i~r~LkpgG~li~~~~~ 287 (362)
.-+..|+++.+..+... .++ ..+++.+.+.++.+|.++.....
T Consensus 102 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~ 170 (296)
T 3k31_A 102 LAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYY 170 (296)
T ss_dssp HHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECG
T ss_pred HHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEeh
Confidence 01468999988765321 111 13456677777888988876543
No 431
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=85.44 E-value=0.6 Score=43.47 Aligned_cols=100 Identities=17% Similarity=0.135 Sum_probs=55.8
Q ss_pred CCCeEEEEcCcc-chHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCCCCcceEEEec
Q 018003 177 LGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAG 255 (362)
Q Consensus 177 ~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~~~~fD~V~~~ 255 (362)
++.+|+=+|+|. |......+... +.+|+++|.+++.++.+++.+.. .+.....+...+.-.-...|+|+..
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~-Ga~V~~~d~~~~~l~~~~~~~g~-------~~~~~~~~~~~l~~~l~~aDvVi~~ 238 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGM-GATVTVLDINIDKLRQLDAEFCG-------RIHTRYSSAYELEGAVKRADLVIGA 238 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTTT-------SSEEEECCHHHHHHHHHHCSEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHhcCC-------eeEeccCCHHHHHHHHcCCCEEEEC
Confidence 578999999975 55444444332 34999999999888777654211 1111111111111001257999874
Q ss_pred ccccCCCCHHHHHHHHHhhccCCcEEEEE
Q 018003 256 AAIHCWSSPSTGVAEISRVLRPGGVFVGT 284 (362)
Q Consensus 256 ~vl~h~~d~~~~l~~i~r~LkpgG~li~~ 284 (362)
-.......+.-+.++..+.+||||+++-.
T Consensus 239 ~~~p~~~t~~li~~~~l~~mk~g~~iV~v 267 (377)
T 2vhw_A 239 VLVPGAKAPKLVSNSLVAHMKPGAVLVDI 267 (377)
T ss_dssp CCCTTSCCCCCBCHHHHTTSCTTCEEEEG
T ss_pred CCcCCCCCcceecHHHHhcCCCCcEEEEE
Confidence 32221112222346677889999988754
No 432
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=85.30 E-value=5.9 Score=35.00 Aligned_cols=104 Identities=16% Similarity=0.135 Sum_probs=67.4
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCC--HHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC-----C--
Q 018003 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYS--ENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F-- 244 (362)
Q Consensus 177 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s--~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p-----~-- 244 (362)
.++++|=.|++.|. ++..|++.|. +|+.++.+ ....+...+.++.. ..++.++.+|+.+.. +
T Consensus 48 ~~k~vlVTGas~GIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~Dv~d~~~v~~~~~~ 121 (294)
T 3r3s_A 48 KDRKALVTGGDSGIGRAAAIAYAREGA--DVAINYLPAEEEDAQQVKALIEEC----GRKAVLLPGDLSDESFARSLVHK 121 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEECCGGGHHHHHHHHHHHHHT----TCCEEECCCCTTSHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCcchhHHHHHHHHHHHc----CCcEEEEEecCCCHHHHHHHHHH
Confidence 36789999987653 4556666676 89998886 33445555544444 467888999987642 0
Q ss_pred ---CCCcceEEEecccccCC-C-----CH--------------HHHHHHHHhhccCCcEEEEEEE
Q 018003 245 ---ASSSIDAVHAGAAIHCW-S-----SP--------------STGVAEISRVLRPGGVFVGTTY 286 (362)
Q Consensus 245 ---~~~~fD~V~~~~vl~h~-~-----d~--------------~~~l~~i~r~LkpgG~li~~~~ 286 (362)
.-+..|+++.+..+... . ++ ..+++.+.+.++++|.++....
T Consensus 122 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS 186 (294)
T 3r3s_A 122 AREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSS 186 (294)
T ss_dssp HHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECC
T ss_pred HHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECC
Confidence 01468999988765331 1 11 1346677778888898877644
No 433
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=85.28 E-value=9 Score=32.99 Aligned_cols=79 Identities=19% Similarity=0.211 Sum_probs=56.4
Q ss_pred CCCeEEEEcC-ccc--h-HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC-----C---
Q 018003 177 LGGNIIDASC-GSG--L-FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F--- 244 (362)
Q Consensus 177 ~~~~vLDiGc-G~G--~-~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p-----~--- 244 (362)
.++++|=.|+ |.| . +...+++.|. +|+.++.+++.++...+.+... ...++.++.+|+.+.. +
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~Dl~~~~~v~~~~~~~ 95 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEGA--DVVISDYHERRLGETRDQLADL---GLGRVEAVVCDVTSTEAVDALITQT 95 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHTT---CSSCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCCC--EEEEecCCHHHHHHHHHHHHhc---CCCceEEEEeCCCCHHHHHHHHHHH
Confidence 3678999987 554 3 4566777776 8999999998888777776544 2358999999997642 0
Q ss_pred --CCCcceEEEecccccC
Q 018003 245 --ASSSIDAVHAGAAIHC 260 (362)
Q Consensus 245 --~~~~fD~V~~~~vl~h 260 (362)
..+..|+++.+..+..
T Consensus 96 ~~~~g~id~li~~Ag~~~ 113 (266)
T 3o38_A 96 VEKAGRLDVLVNNAGLGG 113 (266)
T ss_dssp HHHHSCCCEEEECCCCCC
T ss_pred HHHhCCCcEEEECCCcCC
Confidence 0136899998876543
No 434
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=85.24 E-value=9.8 Score=33.58 Aligned_cols=77 Identities=18% Similarity=0.240 Sum_probs=54.0
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCC------------HHHHHHHHHHHhhcCCCCCCCEEEEEecCCC
Q 018003 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYS------------ENMLKQCYEFVQQESNFPKENFLLVRADISR 241 (362)
Q Consensus 177 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s------------~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~ 241 (362)
.++++|=.|++.|. ++..|++.|. +|+.+|.+ ++.++...+.+... ..++.++.+|+.+
T Consensus 27 ~gk~~lVTGas~GIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~ 100 (299)
T 3t7c_A 27 EGKVAFITGAARGQGRSHAITLAREGA--DIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEAL----GRRIIASQVDVRD 100 (299)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHT----TCCEEEEECCTTC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEecccccccccccccCHHHHHHHHHHHHhc----CCceEEEECCCCC
Confidence 46789999987763 4566666776 99999987 66666665555554 4688999999976
Q ss_pred CC-----C-----CCCcceEEEeccccc
Q 018003 242 LP-----F-----ASSSIDAVHAGAAIH 259 (362)
Q Consensus 242 ~p-----~-----~~~~fD~V~~~~vl~ 259 (362)
.. + .-+..|+++.+..+.
T Consensus 101 ~~~v~~~~~~~~~~~g~iD~lv~nAg~~ 128 (299)
T 3t7c_A 101 FDAMQAAVDDGVTQLGRLDIVLANAALA 128 (299)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHHhCCCCEEEECCCCC
Confidence 42 0 114689999876643
No 435
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=85.13 E-value=0.78 Score=42.38 Aligned_cols=101 Identities=17% Similarity=0.179 Sum_probs=58.0
Q ss_pred CCCeEEEEcCcc-chHHHHHHHh-CCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCCCCcceEEEe
Q 018003 177 LGGNIIDASCGS-GLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHA 254 (362)
Q Consensus 177 ~~~~vLDiGcG~-G~~~~~l~~~-~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~~~~fD~V~~ 254 (362)
++.+||=+|+|. |.....++.. |. +|+++|.+++.++.+++..... +.....+...+.-.-..+|+|+.
T Consensus 166 ~~~~VlViGaGgvG~~aa~~a~~~Ga--~V~v~dr~~~r~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~DvVI~ 236 (361)
T 1pjc_A 166 KPGKVVILGGGVVGTEAAKMAVGLGA--QVQIFDINVERLSYLETLFGSR-------VELLYSNSAEIETAVAEADLLIG 236 (361)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHGGG-------SEEEECCHHHHHHHHHTCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC--EEEEEeCCHHHHHHHHHhhCce-------eEeeeCCHHHHHHHHcCCCEEEE
Confidence 347999999975 5544444443 43 9999999998888877654322 21221111111000125899987
Q ss_pred cccccCCCCHHHHHHHHHhhccCCcEEEEEEE
Q 018003 255 GAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 286 (362)
Q Consensus 255 ~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~~ 286 (362)
.-....-..|..+.++..+.++|||+++-...
T Consensus 237 ~~~~~~~~~~~li~~~~~~~~~~g~~ivdv~~ 268 (361)
T 1pjc_A 237 AVLVPGRRAPILVPASLVEQMRTGSVIVDVAV 268 (361)
T ss_dssp CCCCTTSSCCCCBCHHHHTTSCTTCEEEETTC
T ss_pred CCCcCCCCCCeecCHHHHhhCCCCCEEEEEec
Confidence 55443322222224556778999998876543
No 436
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=85.10 E-value=6.7 Score=34.13 Aligned_cols=79 Identities=16% Similarity=0.204 Sum_probs=58.7
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC----------
Q 018003 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP---------- 243 (362)
Q Consensus 177 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p---------- 243 (362)
.|+++|=-|++.|. .+..|++.|. +|+.+|.+++.++...+.+... ..++..+.+|+.+..
T Consensus 8 ~gKvalVTGas~GIG~aia~~la~~Ga--~Vvi~~~~~~~~~~~~~~l~~~----g~~~~~~~~Dv~~~~~v~~~~~~~~ 81 (255)
T 4g81_D 8 TGKTALVTGSARGLGFAYAEGLAAAGA--RVILNDIRATLLAESVDTLTRK----GYDAHGVAFDVTDELAIEAAFSKLD 81 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC--EEEECCSCHHHHHHHHHHHHHT----TCCEEECCCCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhc----CCcEEEEEeeCCCHHHHHHHHHHHH
Confidence 46788888877764 4566666776 9999999999888888777766 567888999987632
Q ss_pred CCCCcceEEEecccccCC
Q 018003 244 FASSSIDAVHAGAAIHCW 261 (362)
Q Consensus 244 ~~~~~fD~V~~~~vl~h~ 261 (362)
-.-+..|+++.+..+.+.
T Consensus 82 ~~~G~iDiLVNNAG~~~~ 99 (255)
T 4g81_D 82 AEGIHVDILINNAGIQYR 99 (255)
T ss_dssp HTTCCCCEEEECCCCCCC
T ss_pred HHCCCCcEEEECCCCCCC
Confidence 123679999988766543
No 437
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=84.93 E-value=4.5 Score=34.84 Aligned_cols=102 Identities=16% Similarity=0.099 Sum_probs=63.6
Q ss_pred CCeEEEEcCccch---HHHHHHH-hCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC-----CC---
Q 018003 178 GGNIIDASCGSGL---FSRIFAK-SGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----FA--- 245 (362)
Q Consensus 178 ~~~vLDiGcG~G~---~~~~l~~-~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p-----~~--- 245 (362)
+++||=.|++.|. ++..|++ .|. +|++++.++...+...+.+... ..++.++.+|+.+.. +.
T Consensus 4 ~k~vlITGasggIG~~~a~~L~~~~g~--~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dl~~~~~~~~~~~~~~ 77 (276)
T 1wma_A 4 IHVALVTGGNKGIGLAIVRDLCRLFSG--DVVLTARDVTRGQAAVQQLQAE----GLSPRFHQLDIDDLQSIRALRDFLR 77 (276)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHHSSS--EEEEEESSHHHHHHHHHHHHHT----TCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHhcCC--eEEEEeCChHHHHHHHHHHHhc----CCeeEEEECCCCCHHHHHHHHHHHH
Confidence 5678877755432 3344455 555 9999999987777666666544 357889999997642 00
Q ss_pred --CCcceEEEecccccCCC----C-H--------------HHHHHHHHhhccCCcEEEEEE
Q 018003 246 --SSSIDAVHAGAAIHCWS----S-P--------------STGVAEISRVLRPGGVFVGTT 285 (362)
Q Consensus 246 --~~~fD~V~~~~vl~h~~----d-~--------------~~~l~~i~r~LkpgG~li~~~ 285 (362)
.+.+|+|+.+....... . . ..+++.+.+.++++|.++...
T Consensus 78 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~s 138 (276)
T 1wma_A 78 KEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVS 138 (276)
T ss_dssp HHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred HhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEEC
Confidence 13689999776543211 1 1 134566667777778777654
No 438
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=84.74 E-value=8.2 Score=33.57 Aligned_cols=78 Identities=17% Similarity=0.227 Sum_probs=54.6
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeC-------------CHHHHHHHHHHHhhcCCCCCCCEEEEEecCC
Q 018003 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDY-------------SENMLKQCYEFVQQESNFPKENFLLVRADIS 240 (362)
Q Consensus 177 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~-------------s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~ 240 (362)
.++++|=.|++.|. .+..|++.|. +|+.+|. +++.++...+.+... ..++.++.+|+.
T Consensus 10 ~~k~~lVTGas~GIG~a~a~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~D~~ 83 (277)
T 3tsc_A 10 EGRVAFITGAARGQGRAHAVRMAAEGA--DIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAA----NRRIVAAVVDTR 83 (277)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHT----TCCEEEEECCTT
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCC--EEEEEeccccccccccccccCHHHHHHHHHHHHhc----CCeEEEEECCCC
Confidence 36788988987653 4566666776 9999998 666666666655554 467899999997
Q ss_pred CCC-----CC-----CCcceEEEecccccC
Q 018003 241 RLP-----FA-----SSSIDAVHAGAAIHC 260 (362)
Q Consensus 241 ~~p-----~~-----~~~fD~V~~~~vl~h 260 (362)
+.. +. -+..|+++.+..+..
T Consensus 84 ~~~~v~~~~~~~~~~~g~id~lvnnAg~~~ 113 (277)
T 3tsc_A 84 DFDRLRKVVDDGVAALGRLDIIVANAGVAA 113 (277)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 642 11 146899998876543
No 439
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=84.26 E-value=7.6 Score=33.54 Aligned_cols=106 Identities=18% Similarity=0.189 Sum_probs=70.7
Q ss_pred CCCeEEEEcCc----cch-HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC--------
Q 018003 177 LGGNIIDASCG----SGL-FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-------- 243 (362)
Q Consensus 177 ~~~~vLDiGcG----~G~-~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p-------- 243 (362)
.++++|=-|++ -|. .+..|++.|. +|+.++.+++.++.+.+.+++. ...++.++.+|+.+..
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga--~Vvi~~r~~~~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~ 79 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQLGA--KLVFTYRKERSRKELEKLLEQL---NQPEAHLYQIDVQSDEEVINGFEQ 79 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHTTC--EEEEEESSGGGHHHHHHHHGGG---TCSSCEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhc---CCCcEEEEEccCCCHHHHHHHHHH
Confidence 47788988853 443 4667777776 9999999998888887777664 2357888999987632
Q ss_pred --CCCCcceEEEecccccCCC---------CHH--------------HHHHHHHhhccCCcEEEEEEEc
Q 018003 244 --FASSSIDAVHAGAAIHCWS---------SPS--------------TGVAEISRVLRPGGVFVGTTYI 287 (362)
Q Consensus 244 --~~~~~fD~V~~~~vl~h~~---------d~~--------------~~l~~i~r~LkpgG~li~~~~~ 287 (362)
-.-+..|+++.+..+.... +.+ ...+...+.++.+|.++.....
T Consensus 80 ~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~ 148 (256)
T 4fs3_A 80 IGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYL 148 (256)
T ss_dssp HHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECG
T ss_pred HHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEecc
Confidence 1125789999875542211 111 1234455677889998876543
No 440
>3j21_i 50S ribosomal protein L37AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=84.09 E-value=0.47 Score=33.59 Aligned_cols=32 Identities=25% Similarity=0.638 Sum_probs=22.6
Q ss_pred CeeeCCCCCCCcccccCCCCccccccCCceecCccCccccc
Q 018003 70 NVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSG 110 (362)
Q Consensus 70 ~~l~CP~C~~~l~~~~~~~~~~~~~~~~~l~C~~C~~~~~~ 110 (362)
..+.||.|+..-.. . ...++++|..|+..+..
T Consensus 34 ~ky~CpfCGk~~vk-R--------~a~GIW~C~kCg~~~AG 65 (83)
T 3j21_i 34 QKHTCPVCGRKAVK-R--------ISTGIWQCQKCGATFAG 65 (83)
T ss_dssp SCBCCSSSCSSCEE-E--------EETTEEEETTTCCEEEC
T ss_pred cccCCCCCCCceeE-e--------cCcCeEEcCCCCCEEeC
Confidence 45789999975211 1 22479999999987655
No 441
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=84.07 E-value=3.5 Score=35.70 Aligned_cols=103 Identities=16% Similarity=0.137 Sum_probs=66.8
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEE-eCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC-----C---
Q 018003 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVAL-DYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F--- 244 (362)
Q Consensus 177 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gv-D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p-----~--- 244 (362)
.++++|=.|++.|. ++..|++.|. +|+.+ +.+++..+...+.++.. ..++.++.+|+.+.. +
T Consensus 7 ~~k~vlVTGas~GIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~ 80 (259)
T 3edm_A 7 TNRTIVVAGAGRDIGRACAIRFAQEGA--NVVLTYNGAAEGAATAVAEIEKL----GRSALAIKADLTNAAEVEAAISAA 80 (259)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECSSCHHHHHHHHHHHTT----TSCCEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhc----CCceEEEEcCCCCHHHHHHHHHHH
Confidence 36789989987653 4556666676 88887 66776666666666554 467889999997642 0
Q ss_pred --CCCcceEEEeccccc-C---CC--CH--------------HHHHHHHHhhccCCcEEEEEE
Q 018003 245 --ASSSIDAVHAGAAIH-C---WS--SP--------------STGVAEISRVLRPGGVFVGTT 285 (362)
Q Consensus 245 --~~~~fD~V~~~~vl~-h---~~--d~--------------~~~l~~i~r~LkpgG~li~~~ 285 (362)
.-+..|+++.+.... . +. ++ ..+++.+.+.++++|.++...
T Consensus 81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~is 143 (259)
T 3edm_A 81 ADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFS 143 (259)
T ss_dssp HHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred HHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEc
Confidence 014689999876533 1 11 11 134566667777788877654
No 442
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=83.91 E-value=7.5 Score=34.20 Aligned_cols=100 Identities=17% Similarity=0.136 Sum_probs=69.2
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC----------
Q 018003 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP---------- 243 (362)
Q Consensus 177 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p---------- 243 (362)
.|+.+|=-|++.|. .+..|++.|. +|+.+|.+++.++.+.+.+ ..+...+.+|+.+..
T Consensus 28 ~gKvalVTGas~GIG~aiA~~la~~Ga--~V~i~~r~~~~l~~~~~~~-------g~~~~~~~~Dv~~~~~v~~~~~~~~ 98 (273)
T 4fgs_A 28 NAKIAVITGATSGIGLAAAKRFVAEGA--RVFITGRRKDVLDAAIAEI-------GGGAVGIQADSANLAELDRLYEKVK 98 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHH-------CTTCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHc-------CCCeEEEEecCCCHHHHHHHHHHHH
Confidence 46788888987764 4566677776 9999999998887766544 346778889987642
Q ss_pred CCCCcceEEEecccccCCCC-----H--------------HHHHHHHHhhccCCcEEEEEE
Q 018003 244 FASSSIDAVHAGAAIHCWSS-----P--------------STGVAEISRVLRPGGVFVGTT 285 (362)
Q Consensus 244 ~~~~~fD~V~~~~vl~h~~d-----~--------------~~~l~~i~r~LkpgG~li~~~ 285 (362)
-.-+..|+++.+..+..... + -.+.+.+.+.|+.+|.++...
T Consensus 99 ~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInis 159 (273)
T 4fgs_A 99 AEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTG 159 (273)
T ss_dssp HHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEC
T ss_pred HHcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEe
Confidence 11257899998876543311 1 144677778888888877654
No 443
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=83.89 E-value=9.3 Score=34.98 Aligned_cols=93 Identities=8% Similarity=-0.003 Sum_probs=58.9
Q ss_pred CCCCeEEEEcC-c-cchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC-----CCCCc
Q 018003 176 VLGGNIIDASC-G-SGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----FASSS 248 (362)
Q Consensus 176 ~~~~~vLDiGc-G-~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p-----~~~~~ 248 (362)
.++.+||=+|+ | .|..+..+++.. +.+|+++. +++.++.+++. .-..++...-.++. ...+.
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~-Ga~Vi~~~-~~~~~~~~~~l---------Ga~~vi~~~~~~~~~~v~~~t~g~ 231 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLS-GYIPIATC-SPHNFDLAKSR---------GAEEVFDYRAPNLAQTIRTYTKNN 231 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEE-CGGGHHHHHHT---------TCSEEEETTSTTHHHHHHHHTTTC
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHC-CCEEEEEe-CHHHHHHHHHc---------CCcEEEECCCchHHHHHHHHccCC
Confidence 67889999998 3 688888887763 34888885 78777777662 11122222111110 12345
Q ss_pred ceEEEecccccCCCCHHHHHHHHHhhc-cCCcEEEEEE
Q 018003 249 IDAVHAGAAIHCWSSPSTGVAEISRVL-RPGGVFVGTT 285 (362)
Q Consensus 249 fD~V~~~~vl~h~~d~~~~l~~i~r~L-kpgG~li~~~ 285 (362)
+|+|+-. ...+ ..+....+.| ++||+++...
T Consensus 232 ~d~v~d~-----~g~~-~~~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 232 LRYALDC-----ITNV-ESTTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp CCEEEES-----SCSH-HHHHHHHHHSCTTCEEEEESS
T ss_pred ccEEEEC-----CCch-HHHHHHHHHhhcCCCEEEEEe
Confidence 8998743 3333 4577788888 6999998753
No 444
>3flo_B DNA polymerase alpha catalytic subunit A; protein-protein complex, phosphoesterase fold, OB fold, zinc motif, DNA replication, nucleus; HET: DNA; 2.50A {Saccharomyces cerevisiae}
Probab=83.78 E-value=0.63 Score=39.31 Aligned_cols=44 Identities=27% Similarity=0.499 Sum_probs=28.0
Q ss_pred ccccCCeeeCCCCCCCcccccCCCCccccccCCceecCccCccc
Q 018003 65 ASTSKNVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTY 108 (362)
Q Consensus 65 ~~~~~~~l~CP~C~~~l~~~~~~~~~~~~~~~~~l~C~~C~~~~ 108 (362)
..-..-.+.||.|+..+...+........+....+.|++|+..+
T Consensus 16 r~c~~l~l~Cp~C~~~~~F~gv~~~~~~~~~~sg~~C~~C~~~~ 59 (206)
T 3flo_B 16 KDTVTLELSCPSCDKRFPFGGIVSSNYYRVSYNGLQCKHCEQLF 59 (206)
T ss_dssp TTCCCEEEECTTTCCEEEECSSSCCSSEEEETTEEEETTTCCBC
T ss_pred CcCceeEEECCCCCCccCCCCcccCCCcccccccccCCCCCCcC
Confidence 33445568899999866555432221222566789999999754
No 445
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=83.61 E-value=6.9 Score=34.21 Aligned_cols=77 Identities=13% Similarity=0.122 Sum_probs=54.8
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCC---------
Q 018003 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF--------- 244 (362)
Q Consensus 177 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~--------- 244 (362)
.++++|=.|++.|. ++..|++.|. +|+.+|.+++.++...+.+... ..++.++.+|+.+..-
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~~~~~~~~~~ 105 (275)
T 4imr_A 32 RGRTALVTGSSRGIGAAIAEGLAGAGA--HVILHGVKPGSTAAVQQRIIAS----GGTAQELAGDLSEAGAGTDLIERAE 105 (275)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSTTTTHHHHHHHHHT----TCCEEEEECCTTSTTHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHHHhc----CCeEEEEEecCCCHHHHHHHHHHHH
Confidence 36688888877653 4555666676 9999999987777776666554 4678999999976530
Q ss_pred CCCcceEEEeccccc
Q 018003 245 ASSSIDAVHAGAAIH 259 (362)
Q Consensus 245 ~~~~fD~V~~~~vl~ 259 (362)
..+..|+++.+..+.
T Consensus 106 ~~g~iD~lvnnAg~~ 120 (275)
T 4imr_A 106 AIAPVDILVINASAQ 120 (275)
T ss_dssp HHSCCCEEEECCCCC
T ss_pred HhCCCCEEEECCCCC
Confidence 014689999887653
No 446
>1gh9_A 8.3 kDa protein (gene MTH1184); beta+alpha complex structure, structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: g.41.6.1
Probab=83.58 E-value=0.55 Score=32.32 Aligned_cols=30 Identities=20% Similarity=0.479 Sum_probs=21.6
Q ss_pred eeeCCCCCCCcccccCCCCccccccCCceecCccCcccccC
Q 018003 71 VLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSGV 111 (362)
Q Consensus 71 ~l~CP~C~~~l~~~~~~~~~~~~~~~~~l~C~~C~~~~~~~ 111 (362)
.+.|| |+..+.... ......|+ ||......
T Consensus 4 vv~C~-C~~~~~~~~---------~~kT~~C~-CG~~~~~~ 33 (71)
T 1gh9_A 4 IFRCD-CGRALYSRE---------GAKTRKCV-CGRTVNVK 33 (71)
T ss_dssp EEEET-TSCCEEEET---------TCSEEEET-TTEEEECC
T ss_pred EEECC-CCCEEEEcC---------CCcEEECC-CCCeeeec
Confidence 46899 998765544 12578999 99887663
No 447
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=83.56 E-value=6.8 Score=34.68 Aligned_cols=80 Identities=24% Similarity=0.330 Sum_probs=52.1
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC-----CC---
Q 018003 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----FA--- 245 (362)
Q Consensus 177 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p-----~~--- 245 (362)
.++++|=.|++.|. ++..|++.|. +|+.++.+++.++...+.+... +....++.++.+|+.+.. +.
T Consensus 25 ~~k~vlVTGas~gIG~aia~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 101 (297)
T 1xhl_A 25 SGKSVIITGSSNGIGRSAAVIFAKEGA--QVTITGRNEDRLEETKQQILKA-GVPAEKINAVVADVTEASGQDDIINTTL 101 (297)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT-TCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc-CCCCceEEEEecCCCCHHHHHHHHHHHH
Confidence 35678888876552 3455566665 9999999988777666655443 000116889999997642 10
Q ss_pred --CCcceEEEeccccc
Q 018003 246 --SSSIDAVHAGAAIH 259 (362)
Q Consensus 246 --~~~fD~V~~~~vl~ 259 (362)
-+.+|+++.+..+.
T Consensus 102 ~~~g~iD~lvnnAG~~ 117 (297)
T 1xhl_A 102 AKFGKIDILVNNAGAN 117 (297)
T ss_dssp HHHSCCCEEEECCCCC
T ss_pred HhcCCCCEEEECCCcC
Confidence 13689999877643
No 448
>3iz5_m 60S ribosomal protein L43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_m 1ysh_D 2zkr_z
Probab=83.50 E-value=0.55 Score=33.90 Aligned_cols=32 Identities=25% Similarity=0.389 Sum_probs=22.5
Q ss_pred CeeeCCCCCCCcccccCCCCccccccCCceecCccCccccc
Q 018003 70 NVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSG 110 (362)
Q Consensus 70 ~~l~CP~C~~~l~~~~~~~~~~~~~~~~~l~C~~C~~~~~~ 110 (362)
..+.||.|+..-.. . ...++|+|..|+..+..
T Consensus 35 ~ky~CpfCgk~~vk-R--------~a~GIW~C~~Cg~~~AG 66 (92)
T 3iz5_m 35 SKYFCEFCGKFAVK-R--------KAVGIWGCKDCGKVKAG 66 (92)
T ss_dssp SCBCCTTTCSSCBE-E--------EETTEEECSSSCCEEEC
T ss_pred ccccCcccCCCeeE-e--------cCcceEEcCCCCCEEeC
Confidence 34689999975211 1 22479999999987665
No 449
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=83.37 E-value=9.8 Score=33.23 Aligned_cols=77 Identities=17% Similarity=0.246 Sum_probs=53.9
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCC----------------HHHHHHHHHHHhhcCCCCCCCEEEEEe
Q 018003 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYS----------------ENMLKQCYEFVQQESNFPKENFLLVRA 237 (362)
Q Consensus 177 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s----------------~~~~~~a~~~~~~~~~~~~~~~~~~~~ 237 (362)
.++++|=.|++.|. ++..|++.|. +|+.+|.+ ++.++...+.+... ..++.++.+
T Consensus 10 ~~k~~lVTGas~gIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 83 (286)
T 3uve_A 10 EGKVAFVTGAARGQGRSHAVRLAQEGA--DIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGH----NRRIVTAEV 83 (286)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTT----TCCEEEEEC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC--eEEEEeccccccccccccccccCCHHHHHHHHHHHhhc----CCceEEEEc
Confidence 46789999987763 4566666776 99999987 56666665555544 467899999
Q ss_pred cCCCCC-----C-----CCCcceEEEeccccc
Q 018003 238 DISRLP-----F-----ASSSIDAVHAGAAIH 259 (362)
Q Consensus 238 d~~~~p-----~-----~~~~fD~V~~~~vl~ 259 (362)
|+.+.. + .-+..|+++.+..+.
T Consensus 84 Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~ 115 (286)
T 3uve_A 84 DVRDYDALKAAVDSGVEQLGRLDIIVANAGIG 115 (286)
T ss_dssp CTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCEEEECCccc
Confidence 997642 0 114689999887653
No 450
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=83.36 E-value=0.9 Score=42.08 Aligned_cols=99 Identities=14% Similarity=0.189 Sum_probs=53.4
Q ss_pred CCCeEEEEcCcc-chHHHHHH-HhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCCCCcceEEEe
Q 018003 177 LGGNIIDASCGS-GLFSRIFA-KSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHA 254 (362)
Q Consensus 177 ~~~~vLDiGcG~-G~~~~~l~-~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~~~~fD~V~~ 254 (362)
++.+|+=+|+|. |......+ ..| .+|+++|.+++.++.+.+.+. ..+.....+...+.-.-..+|+|+.
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~G--a~V~~~d~~~~~~~~~~~~~g-------~~~~~~~~~~~~l~~~~~~~DvVi~ 235 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGMG--AQVTILDVNHKRLQYLDDVFG-------GRVITLTATEANIKKSVQHADLLIG 235 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHHTT-------TSEEEEECCHHHHHHHHHHCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCC--CEEEEEECCHHHHHHHHHhcC-------ceEEEecCCHHHHHHHHhCCCEEEE
Confidence 467999999964 44433333 334 499999999987777655321 1221111111111100125799886
Q ss_pred cccccCCCCHHHHHHHHHhhccCCcEEEEE
Q 018003 255 GAAIHCWSSPSTGVAEISRVLRPGGVFVGT 284 (362)
Q Consensus 255 ~~vl~h~~d~~~~l~~i~r~LkpgG~li~~ 284 (362)
.-.......+..+.+++.+.+||||+++..
T Consensus 236 ~~g~~~~~~~~li~~~~l~~mk~gg~iV~v 265 (369)
T 2eez_A 236 AVLVPGAKAPKLVTRDMLSLMKEGAVIVDV 265 (369)
T ss_dssp CCC-------CCSCHHHHTTSCTTCEEEEC
T ss_pred CCCCCccccchhHHHHHHHhhcCCCEEEEE
Confidence 544321111112356777888999987754
No 451
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=83.34 E-value=8.1 Score=33.57 Aligned_cols=102 Identities=20% Similarity=0.228 Sum_probs=66.7
Q ss_pred CCeEEEEcCccch---HHHHHHHhCCCCEEEEEe-CCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC-----C----
Q 018003 178 GGNIIDASCGSGL---FSRIFAKSGLFSLVVALD-YSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F---- 244 (362)
Q Consensus 178 ~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD-~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p-----~---- 244 (362)
++++|=.|++.|. .+..|++.|. +|+.++ .++...+...+.+... ..++.++.+|+.+.. +
T Consensus 27 ~k~~lVTGas~GIG~aia~~la~~G~--~Vv~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~v~~~~~~~~ 100 (267)
T 3u5t_A 27 NKVAIVTGASRGIGAAIAARLASDGF--TVVINYAGKAAAAEEVAGKIEAA----GGKALTAQADVSDPAAVRRLFATAE 100 (267)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHHTC--EEEEEESSCSHHHHHHHHHHHHT----TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhc----CCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 6788988887663 4566677776 888774 4555566555555554 467889999997642 0
Q ss_pred -CCCcceEEEecccccCCC-----CH--------------HHHHHHHHhhccCCcEEEEEE
Q 018003 245 -ASSSIDAVHAGAAIHCWS-----SP--------------STGVAEISRVLRPGGVFVGTT 285 (362)
Q Consensus 245 -~~~~fD~V~~~~vl~h~~-----d~--------------~~~l~~i~r~LkpgG~li~~~ 285 (362)
.-+..|+++.+..+.... ++ ..+++.+.+.++++|.++...
T Consensus 101 ~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~is 161 (267)
T 3u5t_A 101 EAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMS 161 (267)
T ss_dssp HHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEe
Confidence 014789999887654321 11 134667777788888887654
No 452
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=83.30 E-value=10 Score=32.71 Aligned_cols=105 Identities=16% Similarity=0.295 Sum_probs=64.0
Q ss_pred CCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC-----CC----
Q 018003 178 GGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----FA---- 245 (362)
Q Consensus 178 ~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p-----~~---- 245 (362)
++++|=.|++.|. +...|++.|. +|+.++.+++..+...+.+... ....++.++.+|+.+.. +.
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 82 (267)
T 2gdz_A 7 GKVALVTGAAQGIGRAFAEALLLKGA--KVALVDWNLEAGVQCKAALHEQ--FEPQKTLFIQCDVADQQQLRDTFRKVVD 82 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHTTT--SCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhh--cCCCceEEEecCCCCHHHHHHHHHHHHH
Confidence 5688888876542 4555666675 9999999987666555544331 01246888999987642 00
Q ss_pred -CCcceEEEecccccCCCCHHH-----------HHHHHHhhccC-----CcEEEEEEE
Q 018003 246 -SSSIDAVHAGAAIHCWSSPST-----------GVAEISRVLRP-----GGVFVGTTY 286 (362)
Q Consensus 246 -~~~fD~V~~~~vl~h~~d~~~-----------~l~~i~r~Lkp-----gG~li~~~~ 286 (362)
-+..|+++.+.......+... ..+.+.+.++. +|.++....
T Consensus 83 ~~g~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS 140 (267)
T 2gdz_A 83 HFGRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSS 140 (267)
T ss_dssp HHSCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECC
T ss_pred HcCCCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCC
Confidence 135799998876544444432 23445555543 577765543
No 453
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=83.22 E-value=5.9 Score=34.20 Aligned_cols=77 Identities=18% Similarity=0.216 Sum_probs=50.0
Q ss_pred CCCeEEEEcCccc---hHHHHHHHhCCCCEEEEEeC-CHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC-----CC--
Q 018003 177 LGGNIIDASCGSG---LFSRIFAKSGLFSLVVALDY-SENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----FA-- 245 (362)
Q Consensus 177 ~~~~vLDiGcG~G---~~~~~l~~~~~~~~v~gvD~-s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p-----~~-- 245 (362)
.+++||=.|++.| .++..|++.|. +|++++. ++..++...+.+... ..++.++.+|+.+.. +.
T Consensus 20 ~~k~vlItGasggiG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~l~~~----~~~~~~~~~D~~~~~~~~~~~~~~ 93 (274)
T 1ja9_A 20 AGKVALTTGAGRGIGRGIAIELGRRGA--SVVVNYGSSSKAAEEVVAELKKL----GAQGVAIQADISKPSEVVALFDKA 93 (274)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHT----TCCEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEcCCchHHHHHHHHHHHhc----CCcEEEEEecCCCHHHHHHHHHHH
Confidence 3568888876543 23455555665 8999998 776666555555443 357889999987642 10
Q ss_pred ---CCcceEEEeccccc
Q 018003 246 ---SSSIDAVHAGAAIH 259 (362)
Q Consensus 246 ---~~~fD~V~~~~vl~ 259 (362)
-+.+|+|+.+....
T Consensus 94 ~~~~~~~d~vi~~Ag~~ 110 (274)
T 1ja9_A 94 VSHFGGLDFVMSNSGME 110 (274)
T ss_dssp HHHHSCEEEEECCCCCC
T ss_pred HHHcCCCCEEEECCCCC
Confidence 13689999876543
No 454
>1ffk_W Ribosomal protein L37AE; ribosome assembly, RNA-RNA, protein-RNA, protein-protein; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1jj2_Y 1k73_1* 1k8a_1* 1k9m_1* 1kc8_1* 1kd1_1* 1kqs_Y* 1m1k_1* 1m90_1* 1n8r_1* 1nji_1* 1q7y_1* 1q81_1* 1q82_1* 1q86_1* 1qvf_Y 1qvg_Y 1w2b_Y 3cxc_Y*
Probab=82.90 E-value=0.42 Score=33.05 Aligned_cols=32 Identities=31% Similarity=0.654 Sum_probs=22.5
Q ss_pred CCeeeCCCCCCC-cccccCCCCccccccCCceecCccCccccc
Q 018003 69 KNVLACPICYKP-LTWIGDSSLSIESAAGSSLQCNTCKKTYSG 110 (362)
Q Consensus 69 ~~~l~CP~C~~~-l~~~~~~~~~~~~~~~~~l~C~~C~~~~~~ 110 (362)
-....||.|+.. +... ..+++.|..|+..+..
T Consensus 25 ~~ky~C~fCgk~~vkR~----------a~GIW~C~~C~~~~AG 57 (73)
T 1ffk_W 25 KKKYKCPVCGFPKLKRA----------STSIWVCGHCGYKIAG 57 (73)
T ss_pred ccCccCCCCCCceeEEE----------EeEEEECCCCCcEEEC
Confidence 345789999873 2221 2378999999987655
No 455
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=82.42 E-value=5.4 Score=34.89 Aligned_cols=78 Identities=17% Similarity=0.241 Sum_probs=56.3
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC-----C----
Q 018003 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F---- 244 (362)
Q Consensus 177 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p-----~---- 244 (362)
.++++|=.|++.|. ++..|++.|. +|+.++.+++.++...+.+... ..++.++.+|+.+.. +
T Consensus 31 ~gk~~lVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dl~d~~~v~~~~~~~~ 104 (276)
T 3r1i_A 31 SGKRALITGASTGIGKKVALAYAEAGA--QVAVAARHSDALQVVADEIAGV----GGKALPIRCDVTQPDQVRGMLDQMT 104 (276)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESSGGGGHHHHHHHHHT----TCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc----CCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 46789988887653 4566666676 9999999988877777766655 457889999997642 0
Q ss_pred -CCCcceEEEecccccC
Q 018003 245 -ASSSIDAVHAGAAIHC 260 (362)
Q Consensus 245 -~~~~fD~V~~~~vl~h 260 (362)
.-+..|+++.+..+..
T Consensus 105 ~~~g~iD~lvnnAg~~~ 121 (276)
T 3r1i_A 105 GELGGIDIAVCNAGIVS 121 (276)
T ss_dssp HHHSCCSEEEECCCCCC
T ss_pred HHcCCCCEEEECCCCCC
Confidence 0136899998876544
No 456
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=82.24 E-value=12 Score=32.33 Aligned_cols=78 Identities=18% Similarity=0.188 Sum_probs=55.1
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhh-cCCCCCCCEEEEEecCCCCCC--------
Q 018003 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQ-ESNFPKENFLLVRADISRLPF-------- 244 (362)
Q Consensus 177 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~-~~~~~~~~~~~~~~d~~~~p~-------- 244 (362)
.++++|=.|++.|. .+..|++.|. +|+.++.+++.++.+.+.+.. . ..++.++.+|+.+..-
T Consensus 19 ~~k~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~ 92 (266)
T 4egf_A 19 DGKRALITGATKGIGADIARAFAAAGA--RLVLSGRDVSELDAARRALGEQF----GTDVHTVAIDLAEPDAPAELARRA 92 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHH----CCCEEEEECCTTSTTHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHhc----CCcEEEEEecCCCHHHHHHHHHHH
Confidence 36688888877653 4556666676 899999999888777666654 3 4578999999977531
Q ss_pred --CCCcceEEEecccccC
Q 018003 245 --ASSSIDAVHAGAAIHC 260 (362)
Q Consensus 245 --~~~~fD~V~~~~vl~h 260 (362)
.-+..|+++.+..+.+
T Consensus 93 ~~~~g~id~lv~nAg~~~ 110 (266)
T 4egf_A 93 AEAFGGLDVLVNNAGISH 110 (266)
T ss_dssp HHHHTSCSEEEEECCCCC
T ss_pred HHHcCCCCEEEECCCcCC
Confidence 0136899998766543
No 457
>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=82.20 E-value=1.1 Score=30.03 Aligned_cols=33 Identities=15% Similarity=0.303 Sum_probs=24.3
Q ss_pred cCCeeeCCCCCCCcccccCCCCccccccCCceecCccCccccc
Q 018003 68 SKNVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSG 110 (362)
Q Consensus 68 ~~~~l~CP~C~~~l~~~~~~~~~~~~~~~~~l~C~~C~~~~~~ 110 (362)
....+.|..|+....+.. ...++|+.||+-...
T Consensus 18 ~~v~Y~C~~Cg~~~~l~~----------~~~iRC~~CG~RILy 50 (63)
T 3h0g_L 18 ATMIYLCADCGARNTIQA----------KEVIRCRECGHRVMY 50 (63)
T ss_dssp -CCCCBCSSSCCBCCCCS----------SSCCCCSSSCCCCCB
T ss_pred CCeEEECCCCCCeeecCC----------CCceECCCCCcEEEE
Confidence 356799999999876543 257999999975544
No 458
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=82.20 E-value=8.9 Score=33.29 Aligned_cols=79 Identities=19% Similarity=0.212 Sum_probs=55.1
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCC------------HHHHHHHHHHHhhcCCCCCCCEEEEEecCCC
Q 018003 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYS------------ENMLKQCYEFVQQESNFPKENFLLVRADISR 241 (362)
Q Consensus 177 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s------------~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~ 241 (362)
.++++|=.|++.|. ++..|++.|. +|+.+|.+ ++.++...+.+... ..++.++.+|+.+
T Consensus 12 ~gk~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~ 85 (278)
T 3sx2_A 12 TGKVAFITGAARGQGRAHAVRLAADGA--DIIAVDLCDQIASVPYPLATPEELAATVKLVEDI----GSRIVARQADVRD 85 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHH----TCCEEEEECCTTC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC--eEEEEecccccccccccccchHHHHHHHHHHHhc----CCeEEEEeCCCCC
Confidence 46789999987653 4566667776 89999987 66666665555554 4689999999976
Q ss_pred CC-----CC-----CCcceEEEecccccCC
Q 018003 242 LP-----FA-----SSSIDAVHAGAAIHCW 261 (362)
Q Consensus 242 ~p-----~~-----~~~fD~V~~~~vl~h~ 261 (362)
.. +. -+..|+++.+..+...
T Consensus 86 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~ 115 (278)
T 3sx2_A 86 RESLSAALQAGLDELGRLDIVVANAGIAPM 115 (278)
T ss_dssp HHHHHHHHHHHHHHHCCCCEEEECCCCCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCCCC
Confidence 42 10 1468999988776543
No 459
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=82.11 E-value=11 Score=32.75 Aligned_cols=78 Identities=19% Similarity=0.189 Sum_probs=55.0
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeC-------------CHHHHHHHHHHHhhcCCCCCCCEEEEEecCC
Q 018003 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDY-------------SENMLKQCYEFVQQESNFPKENFLLVRADIS 240 (362)
Q Consensus 177 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~-------------s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~ 240 (362)
.++++|=.|++.|. ++..|++.|. +|+.+|. +++.++...+.+... ..++.++.+|+.
T Consensus 14 ~gk~~lVTGas~gIG~a~a~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~Dv~ 87 (280)
T 3pgx_A 14 QGRVAFITGAARGQGRSHAVRLAAEGA--DIIACDICAPVSASVTYAPASPEDLDETARLVEDQ----GRKALTRVLDVR 87 (280)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTT----TCCEEEEECCTT
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeccccccccccccccCHHHHHHHHHHHHhc----CCeEEEEEcCCC
Confidence 46789999987653 4566667776 9999997 677777666666554 467889999997
Q ss_pred CCC-----C-----CCCcceEEEecccccC
Q 018003 241 RLP-----F-----ASSSIDAVHAGAAIHC 260 (362)
Q Consensus 241 ~~p-----~-----~~~~fD~V~~~~vl~h 260 (362)
+.. + .-+..|+++.+..+.+
T Consensus 88 ~~~~v~~~~~~~~~~~g~id~lvnnAg~~~ 117 (280)
T 3pgx_A 88 DDAALRELVADGMEQFGRLDVVVANAGVLS 117 (280)
T ss_dssp CHHHHHHHHHHHHHHHCCCCEEEECCCCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 642 0 1146899998876543
No 460
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=82.09 E-value=2.8 Score=37.82 Aligned_cols=68 Identities=24% Similarity=0.365 Sum_probs=51.7
Q ss_pred CeEEEEcCccchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCC-CCcceEEEecc
Q 018003 179 GNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA-SSSIDAVHAGA 256 (362)
Q Consensus 179 ~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~-~~~fD~V~~~~ 256 (362)
.+|+|+=||.|.+..-+.+.|. ..+.++|+++.+.+..+.+. + -.++.+|+.++... -..+|+++...
T Consensus 1 mkvidLFsG~GG~~~G~~~aG~-~~v~a~e~d~~a~~ty~~N~--------~-~~~~~~DI~~i~~~~~~~~D~l~ggp 69 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKAGF-RIICANEYDKSIWKTYESNH--------S-AKLIKGDISKISSDEFPKCDGIIGGP 69 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHTTC-EEEEEEECCTTTHHHHHHHC--------C-SEEEESCGGGCCGGGSCCCSEEECCC
T ss_pred CeEEEeCcCccHHHHHHHHCCC-EEEEEEeCCHHHHHHHHHHC--------C-CCcccCChhhCCHhhCCcccEEEecC
Confidence 3799999999999999999885 35679999998888777652 2 35788999776422 24689998653
No 461
>3izc_m 60S ribosomal protein RPL43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins; NMR {Saccharomyces cerevisiae} PDB: 3izs_m 3o58_g 3o5h_g 3u5e_p 3u5i_p 4b6a_p 1s1i_9
Probab=82.06 E-value=0.63 Score=33.58 Aligned_cols=32 Identities=31% Similarity=0.557 Sum_probs=22.4
Q ss_pred CeeeCCCCCCCcccccCCCCccccccCCceecCccCccccc
Q 018003 70 NVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSG 110 (362)
Q Consensus 70 ~~l~CP~C~~~l~~~~~~~~~~~~~~~~~l~C~~C~~~~~~ 110 (362)
..+.||.|+..-... ...++|+|..|+..+..
T Consensus 35 ~ky~CpfCgk~~vkR---------~a~GIW~C~~C~~~~AG 66 (92)
T 3izc_m 35 ARYDCSFCGKKTVKR---------GAAGIWTCSCCKKTVAG 66 (92)
T ss_dssp SCCCCSSSCSSCCEE---------EETTEEECTTTCCEEEC
T ss_pred cCCcCCCCCCceeee---------cccceEEcCCCCCEEeC
Confidence 457899999752111 22479999999987665
No 462
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=81.97 E-value=14 Score=27.76 Aligned_cols=89 Identities=16% Similarity=0.209 Sum_probs=53.2
Q ss_pred CCeEEEEcCcc-ch-HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC----CCCCcceE
Q 018003 178 GGNIIDASCGS-GL-FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP----FASSSIDA 251 (362)
Q Consensus 178 ~~~vLDiGcG~-G~-~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p----~~~~~fD~ 251 (362)
+.+|+=+|+|. |. ++..+.+.+. +|+++|.+++.++..++. .++.++.+|..... .....+|+
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~--~v~~~d~~~~~~~~~~~~---------~~~~~~~~d~~~~~~l~~~~~~~~d~ 72 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGH--DIVLIDIDKDICKKASAE---------IDALVINGDCTKIKTLEDAGIEDADM 72 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHH---------CSSEEEESCTTSHHHHHHTTTTTCSE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC--eEEEEECCHHHHHHHHHh---------cCcEEEEcCCCCHHHHHHcCcccCCE
Confidence 35789999875 43 3344455554 899999998876655542 24556777765321 11245898
Q ss_pred EEecccccCCCCH--HHHHHHHHhhccCCcEEEE
Q 018003 252 VHAGAAIHCWSSP--STGVAEISRVLRPGGVFVG 283 (362)
Q Consensus 252 V~~~~vl~h~~d~--~~~l~~i~r~LkpgG~li~ 283 (362)
|+..- ++. ...+.++.+.++++ .++.
T Consensus 73 vi~~~-----~~~~~~~~~~~~~~~~~~~-~ii~ 100 (140)
T 1lss_A 73 YIAVT-----GKEEVNLMSSLLAKSYGIN-KTIA 100 (140)
T ss_dssp EEECC-----SCHHHHHHHHHHHHHTTCC-CEEE
T ss_pred EEEee-----CCchHHHHHHHHHHHcCCC-EEEE
Confidence 88653 233 23455666667775 4444
No 463
>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X
Probab=81.94 E-value=0.86 Score=28.24 Aligned_cols=30 Identities=23% Similarity=0.420 Sum_probs=19.4
Q ss_pred CeeeCCCCCCCcccccCCCCccccccCCceecCccCc
Q 018003 70 NVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKK 106 (362)
Q Consensus 70 ~~l~CP~C~~~l~~~~~~~~~~~~~~~~~l~C~~C~~ 106 (362)
..+.|-.||..+...+-+ .-...+|+-||.
T Consensus 2 ~iY~C~rCg~~fs~~el~-------~lP~IrCpyCGy 31 (48)
T 4ayb_P 2 AVYRCGKCWKTFTDEQLK-------VLPGVRCPYCGY 31 (48)
T ss_dssp ---CCCCTTTTCCCCCSC-------CCSSSCCTTTCC
T ss_pred cEEEeeccCCCccHHHHh-------hCCCcccCccCc
Confidence 467899999987655422 125689999995
No 464
>1tfi_A Transcriptional elongation factor SII; transcription regulation; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=81.79 E-value=0.62 Score=29.68 Aligned_cols=40 Identities=18% Similarity=0.390 Sum_probs=22.6
Q ss_pred CeeeCCCCCCCccc-ccCCCCccccccCCceecCccCcccc
Q 018003 70 NVLACPICYKPLTW-IGDSSLSIESAAGSSLQCNTCKKTYS 109 (362)
Q Consensus 70 ~~l~CP~C~~~l~~-~~~~~~~~~~~~~~~l~C~~C~~~~~ 109 (362)
....||.|+..-.. ......+.++.+-..+.|.+|++.+.
T Consensus 8 ~~~~Cp~Cg~~~a~f~q~Q~RsaDE~mT~Fy~C~~Cg~~w~ 48 (50)
T 1tfi_A 8 DLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWK 48 (50)
T ss_dssp CCSCCSSSCSSCEEEEEECSSSSSSCCEEEEEESSSCCEEE
T ss_pred CccCCCCCCCCEEEEEEecCcCCCCCceEEEEcCCCCCeEE
Confidence 34679999984321 01112223333445689999998653
No 465
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=81.78 E-value=18 Score=31.10 Aligned_cols=79 Identities=13% Similarity=0.126 Sum_probs=55.3
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC-----C----
Q 018003 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F---- 244 (362)
Q Consensus 177 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p-----~---- 244 (362)
.++++|=.|++.|. ++..+++.|. +|+.++.+++.++...+.+... ....++.++.+|+.+.. +
T Consensus 7 ~~k~~lVTGas~GIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 82 (265)
T 3lf2_A 7 SEAVAVVTGGSSGIGLATVELLLEAGA--AVAFCARDGERLRAAESALRQR--FPGARLFASVCDVLDALQVRAFAEACE 82 (265)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHH--STTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHh--cCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence 36788988987653 4566666676 8999999998888777766552 11235889999997642 0
Q ss_pred -CCCcceEEEeccccc
Q 018003 245 -ASSSIDAVHAGAAIH 259 (362)
Q Consensus 245 -~~~~fD~V~~~~vl~ 259 (362)
.-+..|+++.+..+.
T Consensus 83 ~~~g~id~lvnnAg~~ 98 (265)
T 3lf2_A 83 RTLGCASILVNNAGQG 98 (265)
T ss_dssp HHHCSCSEEEECCCCC
T ss_pred HHcCCCCEEEECCCCC
Confidence 114689999887653
No 466
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=81.57 E-value=9.1 Score=32.90 Aligned_cols=104 Identities=12% Similarity=0.116 Sum_probs=65.7
Q ss_pred CCCCeEEEEcCc--cc--h-HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC-----C-
Q 018003 176 VLGGNIIDASCG--SG--L-FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F- 244 (362)
Q Consensus 176 ~~~~~vLDiGcG--~G--~-~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p-----~- 244 (362)
.++++||=.|++ .| . ++..|++.|. +|+.++.+....+..++..+.. .++.++.+|+.+.. +
T Consensus 12 ~~~k~vlITGa~~~~giG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~ 84 (271)
T 3ek2_A 12 LDGKRILLTGLLSNRSIAYGIAKACKREGA--ELAFTYVGDRFKDRITEFAAEF-----GSELVFPCDVADDAQIDALFA 84 (271)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTC--EEEEEESSGGGHHHHHHHHHHT-----TCCCEEECCTTCHHHHHHHHH
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHcCC--CEEEEecchhhHHHHHHHHHHc-----CCcEEEECCCCCHHHHHHHHH
Confidence 357799999975 33 2 3455666665 9999998865555444443332 45788999997642 0
Q ss_pred ----CCCcceEEEecccccCC----------CCH--------------HHHHHHHHhhccCCcEEEEEEE
Q 018003 245 ----ASSSIDAVHAGAAIHCW----------SSP--------------STGVAEISRVLRPGGVFVGTTY 286 (362)
Q Consensus 245 ----~~~~fD~V~~~~vl~h~----------~d~--------------~~~l~~i~r~LkpgG~li~~~~ 286 (362)
.-+..|+++.+..+... .++ ..+++.+.+.++++|.++....
T Consensus 85 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS 154 (271)
T 3ek2_A 85 SLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSY 154 (271)
T ss_dssp HHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred HHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEec
Confidence 12468999987765331 111 1345666777777888776654
No 467
>4a17_Y RPL37A, 60S ribosomal protein L32; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_Y 4a1c_Y 4a1e_Y
Probab=81.38 E-value=0.57 Score=34.45 Aligned_cols=32 Identities=34% Similarity=0.605 Sum_probs=22.6
Q ss_pred CeeeCCCCCCCcccccCCCCccccccCCceecCccCccccc
Q 018003 70 NVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSG 110 (362)
Q Consensus 70 ~~l~CP~C~~~l~~~~~~~~~~~~~~~~~l~C~~C~~~~~~ 110 (362)
..+.||.|+..-... ...++|+|..|+..+..
T Consensus 35 aky~CpfCgk~~vKR---------~a~GIW~C~kCg~~~AG 66 (103)
T 4a17_Y 35 AKYGCPFCGKVAVKR---------AAVGIWKCKPCKKIIAG 66 (103)
T ss_dssp SCEECTTTCCEEEEE---------EETTEEEETTTTEEEEC
T ss_pred cCCCCCCCCCceeee---------cCcceEEcCCCCCEEeC
Confidence 458899998752111 22479999999987665
No 468
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=81.15 E-value=4.1 Score=39.20 Aligned_cols=89 Identities=11% Similarity=0.016 Sum_probs=54.9
Q ss_pred CCCCCeEEEEcCcc-chHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCCCCCcceEEE
Q 018003 175 PVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVH 253 (362)
Q Consensus 175 ~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~~~~~fD~V~ 253 (362)
..+|.+|+=+|+|. |......++.. +.+|+++|.++..++.+++. .+.. .++.+. -...|+|+
T Consensus 271 ~l~GktV~IiG~G~IG~~~A~~lka~-Ga~Viv~d~~~~~~~~A~~~----------Ga~~--~~l~e~---l~~aDvVi 334 (494)
T 3ce6_A 271 LIGGKKVLICGYGDVGKGCAEAMKGQ-GARVSVTEIDPINALQAMME----------GFDV--VTVEEA---IGDADIVV 334 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHT----------TCEE--CCHHHH---GGGCSEEE
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc----------CCEE--ecHHHH---HhCCCEEE
Confidence 34688999999986 55544444432 34999999999877776652 2222 222221 13579988
Q ss_pred ecccccCCCCHHHHHHHHHhhccCCcEEEEE
Q 018003 254 AGAAIHCWSSPSTGVAEISRVLRPGGVFVGT 284 (362)
Q Consensus 254 ~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~ 284 (362)
..-.-.++-+ .+..+.+||||+++..
T Consensus 335 ~atgt~~~i~-----~~~l~~mk~ggilvnv 360 (494)
T 3ce6_A 335 TATGNKDIIM-----LEHIKAMKDHAILGNI 360 (494)
T ss_dssp ECSSSSCSBC-----HHHHHHSCTTCEEEEC
T ss_pred ECCCCHHHHH-----HHHHHhcCCCcEEEEe
Confidence 7533233211 3566778999988754
No 469
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=81.07 E-value=15 Score=31.43 Aligned_cols=74 Identities=18% Similarity=0.287 Sum_probs=51.6
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC-----C----
Q 018003 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F---- 244 (362)
Q Consensus 177 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p-----~---- 244 (362)
.++++|=.|++.|. +...|++.|. +|+.+|.+++.++...+.+ ..++.++.+|+.+.. +
T Consensus 7 ~~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~v~~~~~~~~ 77 (259)
T 4e6p_A 7 EGKSALITGSARGIGRAFAEAYVREGA--TVAIADIDIERARQAAAEI-------GPAAYAVQMDVTRQDSIDAAIAATV 77 (259)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHH-------CTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHh-------CCCceEEEeeCCCHHHHHHHHHHHH
Confidence 36788988877652 4556666776 9999999988776665543 346788999997642 0
Q ss_pred -CCCcceEEEeccccc
Q 018003 245 -ASSSIDAVHAGAAIH 259 (362)
Q Consensus 245 -~~~~fD~V~~~~vl~ 259 (362)
.-+..|+++.+..+.
T Consensus 78 ~~~g~id~lv~~Ag~~ 93 (259)
T 4e6p_A 78 EHAGGLDILVNNAALF 93 (259)
T ss_dssp HHSSSCCEEEECCCCC
T ss_pred HHcCCCCEEEECCCcC
Confidence 123689999887653
No 470
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=80.81 E-value=7.4 Score=33.40 Aligned_cols=75 Identities=19% Similarity=0.274 Sum_probs=50.9
Q ss_pred CCeEEEEcCccc---hHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC-----C-----
Q 018003 178 GGNIIDASCGSG---LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F----- 244 (362)
Q Consensus 178 ~~~vLDiGcG~G---~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p-----~----- 244 (362)
++++|=.|++.| .+...|++.|. +|+.++.+++.++...+.+... ..++.++.+|+.+.. +
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~~~ 75 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKDGF--AVAIADYNDATAKAVASEINQA----GGHAVAVKVDVSDRDQVFAAVEQARK 75 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT----TCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc----CCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 357788887654 24455666675 9999999987776666555443 356888999987642 0
Q ss_pred CCCcceEEEecccc
Q 018003 245 ASSSIDAVHAGAAI 258 (362)
Q Consensus 245 ~~~~fD~V~~~~vl 258 (362)
.-+.+|+++.+..+
T Consensus 76 ~~g~id~lv~nAg~ 89 (256)
T 1geg_A 76 TLGGFDVIVNNAGV 89 (256)
T ss_dssp HTTCCCEEEECCCC
T ss_pred HhCCCCEEEECCCC
Confidence 01468999987654
No 471
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=80.80 E-value=9.5 Score=35.74 Aligned_cols=93 Identities=17% Similarity=0.261 Sum_probs=63.3
Q ss_pred CCeEEEEcCcc-chH-HHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC----CCCCcceE
Q 018003 178 GGNIIDASCGS-GLF-SRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP----FASSSIDA 251 (362)
Q Consensus 178 ~~~vLDiGcG~-G~~-~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p----~~~~~fD~ 251 (362)
..+|+=+|+|. |.. +..|.+.+. .|+++|.+++.++.+++ ..+.++.+|..+.. ..-...|+
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~--~vvvId~d~~~v~~~~~----------~g~~vi~GDat~~~~L~~agi~~A~~ 71 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGV--KMVVLDHDPDHIETLRK----------FGMKVFYGDATRMDLLESAGAAKAEV 71 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC--CEEEEECCHHHHHHHHH----------TTCCCEESCTTCHHHHHHTTTTTCSE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC--CEEEEECCHHHHHHHHh----------CCCeEEEcCCCCHHHHHhcCCCccCE
Confidence 45789999875 443 334444454 89999999999988875 25667899987742 12346788
Q ss_pred EEecccccCCCCHH--HHHHHHHhhccCCcEEEEEEEc
Q 018003 252 VHAGAAIHCWSSPS--TGVAEISRVLRPGGVFVGTTYI 287 (362)
Q Consensus 252 V~~~~vl~h~~d~~--~~l~~i~r~LkpgG~li~~~~~ 287 (362)
|++.- +++. ..+....+.+.|...++.....
T Consensus 72 viv~~-----~~~~~n~~i~~~ar~~~p~~~Iiara~~ 104 (413)
T 3l9w_A 72 LINAI-----DDPQTNLQLTEMVKEHFPHLQIIARARD 104 (413)
T ss_dssp EEECC-----SSHHHHHHHHHHHHHHCTTCEEEEEESS
T ss_pred EEECC-----CChHHHHHHHHHHHHhCCCCeEEEEECC
Confidence 77643 3443 4456667778898888876653
No 472
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=80.45 E-value=17 Score=30.84 Aligned_cols=75 Identities=21% Similarity=0.337 Sum_probs=51.4
Q ss_pred CCCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC-----C-CC
Q 018003 176 VLGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F-AS 246 (362)
Q Consensus 176 ~~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p-----~-~~ 246 (362)
.++++||=.|++.|. ++..|++.|. +|+.++.+++.++...+.+ ..++.+..+|+.+.. + ..
T Consensus 12 ~~~k~vlVTGas~gIG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~~ 82 (249)
T 3f9i_A 12 LTGKTSLITGASSGIGSAIARLLHKLGS--KVIISGSNEEKLKSLGNAL-------KDNYTIEVCNLANKEECSNLISKT 82 (249)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHH-------CSSEEEEECCTTSHHHHHHHHHTC
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHh-------ccCccEEEcCCCCHHHHHHHHHhc
Confidence 357789988887653 4555666675 9999999988777665543 346888899987632 1 12
Q ss_pred CcceEEEeccccc
Q 018003 247 SSIDAVHAGAAIH 259 (362)
Q Consensus 247 ~~fD~V~~~~vl~ 259 (362)
+..|+++.+..+.
T Consensus 83 ~~id~li~~Ag~~ 95 (249)
T 3f9i_A 83 SNLDILVCNAGIT 95 (249)
T ss_dssp SCCSEEEECCC--
T ss_pred CCCCEEEECCCCC
Confidence 4689999877653
No 473
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=79.90 E-value=14 Score=32.28 Aligned_cols=76 Identities=18% Similarity=0.211 Sum_probs=52.9
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeC-CHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCCC--------
Q 018003 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDY-SENMLKQCYEFVQQESNFPKENFLLVRADISRLPF-------- 244 (362)
Q Consensus 177 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~-s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p~-------- 244 (362)
.++++|=.|++.|. ++..|++.|. +|+.++. +++.++...+.+... ..++.++.+|+.+..-
T Consensus 28 ~~k~~lVTGas~GIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~Dv~d~~~v~~~~~~~ 101 (280)
T 4da9_A 28 ARPVAIVTGGRRGIGLGIARALAASGF--DIAITGIGDAEGVAPVIAELSGL----GARVIFLRADLADLSSHQATVDAV 101 (280)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCCHHHHHHHHHHHHHT----TCCEEEEECCTTSGGGHHHHHHHH
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCC--eEEEEeCCCHHHHHHHHHHHHhc----CCcEEEEEecCCCHHHHHHHHHHH
Confidence 46788988887653 4566666676 9999995 676666666655554 4688999999977531
Q ss_pred --CCCcceEEEecccc
Q 018003 245 --ASSSIDAVHAGAAI 258 (362)
Q Consensus 245 --~~~~fD~V~~~~vl 258 (362)
.-+..|+++.+..+
T Consensus 102 ~~~~g~iD~lvnnAg~ 117 (280)
T 4da9_A 102 VAEFGRIDCLVNNAGI 117 (280)
T ss_dssp HHHHSCCCEEEEECC-
T ss_pred HHHcCCCCEEEECCCc
Confidence 01368999988765
No 474
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=79.77 E-value=0.78 Score=42.63 Aligned_cols=95 Identities=20% Similarity=0.178 Sum_probs=56.8
Q ss_pred CCCeEEEEcCcc-chHHHHHHH-hCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEec---------C------
Q 018003 177 LGGNIIDASCGS-GLFSRIFAK-SGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRAD---------I------ 239 (362)
Q Consensus 177 ~~~~vLDiGcG~-G~~~~~l~~-~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d---------~------ 239 (362)
++.+|+=+|+|. |......+. .|. +|+++|.++..++.+.+. ...++..+ .
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa--~V~v~D~~~~~l~~~~~l----------Ga~~~~l~~~~~~~~gya~~~~~~ 250 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGA--KTTGYDVRPEVAEQVRSV----------GAQWLDLGIDAAGEGGYARELSEA 250 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTC--EEEEECSSGGGHHHHHHT----------TCEECCCC-------------CHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHc----------CCeEEeccccccccccchhhhhHH
Confidence 568999999996 655444443 454 999999999888777652 12222111 0
Q ss_pred ------CCCCCCCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEE
Q 018003 240 ------SRLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVG 283 (362)
Q Consensus 240 ------~~~p~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~ 283 (362)
..+.-.-...|+|+..-.+..-+.|.-+-+++.+.+|||++++=
T Consensus 251 ~~~~~~~~l~e~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVD 300 (381)
T 3p2y_A 251 ERAQQQQALEDAITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVD 300 (381)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEE
T ss_pred HHhhhHHHHHHHHhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEE
Confidence 00100114689998653222212333345788889999887763
No 475
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=79.71 E-value=9.9 Score=33.06 Aligned_cols=78 Identities=15% Similarity=0.173 Sum_probs=56.0
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC-----C----
Q 018003 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F---- 244 (362)
Q Consensus 177 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p-----~---- 244 (362)
.++++|=.|++.|. ++..|++.|. +|+.++.+++.++...+.+... ..++.++.+|+.+.. +
T Consensus 25 ~gk~~lVTGas~gIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dv~d~~~v~~~~~~~~ 98 (271)
T 4ibo_A 25 GGRTALVTGSSRGLGRAMAEGLAVAGA--RILINGTDPSRVAQTVQEFRNV----GHDAEAVAFDVTSESEIIEAFARLD 98 (271)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC--EEEECCSCHHHHHHHHHHHHHT----TCCEEECCCCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc----CCceEEEEcCCCCHHHHHHHHHHHH
Confidence 36788888876653 4556666676 9999999998888777776655 467889999997642 0
Q ss_pred -CCCcceEEEecccccC
Q 018003 245 -ASSSIDAVHAGAAIHC 260 (362)
Q Consensus 245 -~~~~fD~V~~~~vl~h 260 (362)
..+..|+++.+..+..
T Consensus 99 ~~~g~iD~lv~nAg~~~ 115 (271)
T 4ibo_A 99 EQGIDVDILVNNAGIQF 115 (271)
T ss_dssp HHTCCCCEEEECCCCCC
T ss_pred HHCCCCCEEEECCCCCC
Confidence 1246899998876543
No 476
>3h0g_I DNA-directed RNA polymerases I, II, and III subunit rpabc5; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=79.27 E-value=1.7 Score=32.89 Aligned_cols=38 Identities=18% Similarity=0.232 Sum_probs=26.6
Q ss_pred eeeCCCCCCCcccccCCCCccccccCCceecCccCcccccCCc
Q 018003 71 VLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSGVGT 113 (362)
Q Consensus 71 ~l~CP~C~~~l~~~~~~~~~~~~~~~~~l~C~~C~~~~~~~~g 113 (362)
+.-||.|+..|....... .....+.|.+|+..+...+.
T Consensus 4 m~FCp~Cgn~L~~~~~~~-----~~~~~~~C~~C~y~~~~~~~ 41 (113)
T 3h0g_I 4 FQYCIECNNMLYPREDKV-----DRVLRLACRNCDYSEIAATS 41 (113)
T ss_dssp CCCCSSSCCCCEECCCTT-----TCCCCEECSSSCCEECCSCS
T ss_pred ceeCcCCCCEeeEcccCC-----CCeeEEECCCCCCeEEcCCC
Confidence 566999999887654210 11247999999998877544
No 477
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=79.16 E-value=13 Score=33.03 Aligned_cols=77 Identities=21% Similarity=0.301 Sum_probs=52.9
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCC------------HHHHHHHHHHHhhcCCCCCCCEEEEEecCCC
Q 018003 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYS------------ENMLKQCYEFVQQESNFPKENFLLVRADISR 241 (362)
Q Consensus 177 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s------------~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~ 241 (362)
.++++|=.|++.|. ++..|++.|. +|+.+|.+ ++.++...+.+... ..++.++.+|+.+
T Consensus 45 ~gk~~lVTGas~GIG~aia~~la~~G~--~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~Dv~d 118 (317)
T 3oec_A 45 QGKVAFITGAARGQGRTHAVRLAQDGA--DIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQ----GRRIIARQADVRD 118 (317)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTC--EEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHT----TCCEEEEECCTTC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC--eEEEEecccccccccccccCHHHHHHHHHHHHhc----CCeEEEEECCCCC
Confidence 46788888887653 4566666776 99999886 55565555555544 4678999999976
Q ss_pred CC-----C-----CCCcceEEEeccccc
Q 018003 242 LP-----F-----ASSSIDAVHAGAAIH 259 (362)
Q Consensus 242 ~p-----~-----~~~~fD~V~~~~vl~ 259 (362)
.. + .-+..|+++.+..+.
T Consensus 119 ~~~v~~~~~~~~~~~g~iD~lVnnAg~~ 146 (317)
T 3oec_A 119 LASLQAVVDEALAEFGHIDILVSNVGIS 146 (317)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 42 0 014689999887653
No 478
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=79.14 E-value=18 Score=31.08 Aligned_cols=76 Identities=17% Similarity=0.191 Sum_probs=52.5
Q ss_pred CCeEEEEcCccch---HHHHHHHhCCCCEEEEE-eCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC-----C----
Q 018003 178 GGNIIDASCGSGL---FSRIFAKSGLFSLVVAL-DYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F---- 244 (362)
Q Consensus 178 ~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gv-D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p-----~---- 244 (362)
++++|=.|++.|. ++..|++.|. +|+.+ +.++..++...+.+... ..++.++.+|+.+.. +
T Consensus 4 ~k~vlVTGas~gIG~aia~~l~~~G~--~vv~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~ 77 (258)
T 3oid_A 4 NKCALVTGSSRGVGKAAAIRLAENGY--NIVINYARSKKAALETAEEIEKL----GVKVLVVKANVGQPAKIKEMFQQID 77 (258)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHTT----TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEEEecCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhc----CCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 5678888876553 4555666675 88886 88887777777666554 467899999997642 0
Q ss_pred -CCCcceEEEeccccc
Q 018003 245 -ASSSIDAVHAGAAIH 259 (362)
Q Consensus 245 -~~~~fD~V~~~~vl~ 259 (362)
.-+..|+++.+..+.
T Consensus 78 ~~~g~id~lv~nAg~~ 93 (258)
T 3oid_A 78 ETFGRLDVFVNNAASG 93 (258)
T ss_dssp HHHSCCCEEEECCCCC
T ss_pred HHcCCCCEEEECCCCC
Confidence 114689999887643
No 479
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=79.09 E-value=10 Score=32.43 Aligned_cols=76 Identities=17% Similarity=0.221 Sum_probs=49.2
Q ss_pred CCeEEEEcCccch---HHHHHHHhCCCCEEEEEeC-CHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC-----CC---
Q 018003 178 GGNIIDASCGSGL---FSRIFAKSGLFSLVVALDY-SENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----FA--- 245 (362)
Q Consensus 178 ~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~-s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p-----~~--- 245 (362)
+++||=.|++.|. ++..+++.|. +|+.++. +++.++...+.+... ..++.++.+|+.+.. +.
T Consensus 7 ~k~vlITGasggiG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~l~~~----~~~~~~~~~D~~~~~~~~~~~~~~~ 80 (261)
T 1gee_A 7 GKVVVITGSSTGLGKSMAIRFATEKA--KVVVNYRSKEDEANSVLEEIKKV----GGEAIAVKGDVTVESDVINLVQSAI 80 (261)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHT----TCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC--EEEEEcCCChHHHHHHHHHHHhc----CCceEEEECCCCCHHHHHHHHHHHH
Confidence 5678887766542 3445555665 8999998 776666555555443 356888999987642 10
Q ss_pred --CCcceEEEeccccc
Q 018003 246 --SSSIDAVHAGAAIH 259 (362)
Q Consensus 246 --~~~fD~V~~~~vl~ 259 (362)
-+.+|+|+.+..+.
T Consensus 81 ~~~g~id~li~~Ag~~ 96 (261)
T 1gee_A 81 KEFGKLDVMINNAGLE 96 (261)
T ss_dssp HHHSCCCEEEECCCCC
T ss_pred HHcCCCCEEEECCCCC
Confidence 13689999876643
No 480
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=79.08 E-value=14 Score=31.04 Aligned_cols=77 Identities=19% Similarity=0.133 Sum_probs=49.5
Q ss_pred CCCeEEEEcCcc--ch-HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCE-EEEEecCC-CCCCCCCcceE
Q 018003 177 LGGNIIDASCGS--GL-FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENF-LLVRADIS-RLPFASSSIDA 251 (362)
Q Consensus 177 ~~~~vLDiGcG~--G~-~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~-~~~~~d~~-~~p~~~~~fD~ 251 (362)
.+++||=.|+.. |. ++..|.++|. +|++++-++..++.... .++ .++.+|+. .+.-.-+..|+
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~--~V~~~~R~~~~~~~~~~----------~~~~~~~~~Dl~~~~~~~~~~~D~ 87 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGH--EPVAMVRNEEQGPELRE----------RGASDIVVANLEEDFSHAFASIDA 87 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSGGGHHHHHH----------TTCSEEEECCTTSCCGGGGTTCSE
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCC--eEEEEECChHHHHHHHh----------CCCceEEEcccHHHHHHHHcCCCE
Confidence 367899888743 32 3455555665 99999998876554433 367 88999986 22212246899
Q ss_pred EEecccccCCCCHH
Q 018003 252 VHAGAAIHCWSSPS 265 (362)
Q Consensus 252 V~~~~vl~h~~d~~ 265 (362)
|+.+.......++.
T Consensus 88 vi~~ag~~~~~~~~ 101 (236)
T 3e8x_A 88 VVFAAGSGPHTGAD 101 (236)
T ss_dssp EEECCCCCTTSCHH
T ss_pred EEECCCCCCCCCcc
Confidence 99887765444443
No 481
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=79.00 E-value=12 Score=32.58 Aligned_cols=75 Identities=21% Similarity=0.250 Sum_probs=52.6
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC-----C----
Q 018003 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F---- 244 (362)
Q Consensus 177 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p-----~---- 244 (362)
.++++|=.|++.|. ++..|++.|. +|+.+|.+++.++...+.+ ..++.++.+|+.+.. +
T Consensus 28 ~gk~vlVTGas~gIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~Dv~d~~~v~~~~~~~~ 98 (277)
T 3gvc_A 28 AGKVAIVTGAGAGIGLAVARRLADEGC--HVLCADIDGDAADAAATKI-------GCGAAACRVDVSDEQQIIAMVDACV 98 (277)
T ss_dssp TTCEEEETTTTSTHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHH-------CSSCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHc-------CCcceEEEecCCCHHHHHHHHHHHH
Confidence 36688888887653 4566666776 9999999988776665543 346788999997642 0
Q ss_pred -CCCcceEEEecccccC
Q 018003 245 -ASSSIDAVHAGAAIHC 260 (362)
Q Consensus 245 -~~~~fD~V~~~~vl~h 260 (362)
.-+..|+++.+..+.+
T Consensus 99 ~~~g~iD~lvnnAg~~~ 115 (277)
T 3gvc_A 99 AAFGGVDKLVANAGVVH 115 (277)
T ss_dssp HHHSSCCEEEECCCCCC
T ss_pred HHcCCCCEEEECCCCCC
Confidence 1146899998876643
No 482
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=79.00 E-value=18 Score=31.22 Aligned_cols=80 Identities=14% Similarity=0.207 Sum_probs=53.8
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC-----C-CCC
Q 018003 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F-ASS 247 (362)
Q Consensus 177 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p-----~-~~~ 247 (362)
.++++|=.|++.|. +...+++.|. +|+.+|.+++.++...+.+... .....+.++.+|+.+.. + .-+
T Consensus 9 ~~k~~lVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~g 84 (267)
T 3t4x_A 9 KGKTALVTGSTAGIGKAIATSLVAEGA--NVLINGRREENVNETIKEIRAQ--YPDAILQPVVADLGTEQGCQDVIEKYP 84 (267)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHHHH--CTTCEEEEEECCTTSHHHHHHHHHHCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhh--CCCceEEEEecCCCCHHHHHHHHHhcC
Confidence 35688888876552 4555666676 9999999998877776666544 11345778888987532 0 124
Q ss_pred cceEEEecccccC
Q 018003 248 SIDAVHAGAAIHC 260 (362)
Q Consensus 248 ~fD~V~~~~vl~h 260 (362)
..|+++.+..+.+
T Consensus 85 ~id~lv~nAg~~~ 97 (267)
T 3t4x_A 85 KVDILINNLGIFE 97 (267)
T ss_dssp CCSEEEECCCCCC
T ss_pred CCCEEEECCCCCC
Confidence 6899998876543
No 483
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=78.96 E-value=3.8 Score=37.27 Aligned_cols=98 Identities=12% Similarity=0.036 Sum_probs=56.0
Q ss_pred HHhhcCCCCCCeEEEEcC-c-cchHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC---
Q 018003 169 MKGYLKPVLGGNIIDASC-G-SGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP--- 243 (362)
Q Consensus 169 l~~~l~~~~~~~vLDiGc-G-~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p--- 243 (362)
+.+.....++.+||=.|+ | .|..+..+++......|++++ +++..+.++ +. .. .++. +-.++.
T Consensus 134 l~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~--~g-------a~-~~~~-~~~~~~~~~ 201 (349)
T 4a27_A 134 LFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK--DS-------VT-HLFD-RNADYVQEV 201 (349)
T ss_dssp HHTTSCCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG--GG-------SS-EEEE-TTSCHHHHH
T ss_pred HHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH--cC-------Cc-EEEc-CCccHHHHH
Confidence 334456678999999998 3 477777777753345899998 554444444 11 11 1222 111110
Q ss_pred --CCCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEEE
Q 018003 244 --FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 285 (362)
Q Consensus 244 --~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~~ 285 (362)
...+.+|+|+-.-. .+ .+....+.|+++|++++..
T Consensus 202 ~~~~~~g~Dvv~d~~g-----~~--~~~~~~~~l~~~G~~v~~G 238 (349)
T 4a27_A 202 KRISAEGVDIVLDCLC-----GD--NTGKGLSLLKPLGTYILYG 238 (349)
T ss_dssp HHHCTTCEEEEEEECC--------------CTTEEEEEEEEEEC
T ss_pred HHhcCCCceEEEECCC-----ch--hHHHHHHHhhcCCEEEEEC
Confidence 12357999985332 22 2467889999999998764
No 484
>1wii_A Hypothetical UPF0222 protein MGC4549; domain of unknown function, zinc finger, metal-binding protein, structural genomics; NMR {Mus musculus} SCOP: g.41.3.4
Probab=78.91 E-value=0.79 Score=32.72 Aligned_cols=42 Identities=14% Similarity=0.407 Sum_probs=26.5
Q ss_pred ccCCeeeCCCCCCCcccccCCCCccccccCCceecCccCcccccC
Q 018003 67 TSKNVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSGV 111 (362)
Q Consensus 67 ~~~~~l~CP~C~~~l~~~~~~~~~~~~~~~~~l~C~~C~~~~~~~ 111 (362)
.....+.||.|+..-...-. + +....-+.+.|..|+..|...
T Consensus 19 ~L~t~F~CPfCnh~~sV~vk--i-dk~~~~g~l~C~~Cg~~~~~~ 60 (85)
T 1wii_A 19 TLETQFTCPFCNHEKSCDVK--M-DRARNTGVISCTVCLEEFQTP 60 (85)
T ss_dssp CCSSCCCCTTTCCSSCEEEE--E-ETTTTEEEEEESSSCCEEEEE
T ss_pred CCCCeEcCCCCCCCCeEEEE--E-EccCCEEEEEcccCCCeEEec
Confidence 45577999999986322110 0 111223689999999988663
No 485
>3k1f_M Transcription initiation factor IIB; RNA polymerase II, TFIIB, transcription factor, DNA-binding, DNA-directed RNA polymerase; 4.30A {Saccharomyces cerevisiae}
Probab=78.50 E-value=1.1 Score=36.42 Aligned_cols=31 Identities=26% Similarity=0.452 Sum_probs=21.3
Q ss_pred CeeeCCCCCCC---cccccCCCCccccccCCceecCccCcccc
Q 018003 70 NVLACPICYKP---LTWIGDSSLSIESAAGSSLQCNTCKKTYS 109 (362)
Q Consensus 70 ~~l~CP~C~~~---l~~~~~~~~~~~~~~~~~l~C~~C~~~~~ 109 (362)
....||.|++. +..+ ...+.+.|.+||.+.-
T Consensus 20 ~~~~CPECGs~~t~IV~D---------~erGE~VCsdCGLVLE 53 (197)
T 3k1f_M 20 IVLTCPECKVYPPKIVER---------FSEGDVVCALCGLVLS 53 (197)
T ss_dssp CCCCCTTTCCSSCCEEEE---------GGGTEEEETTTCBBCC
T ss_pred cCeECcCCCCcCCeEEEe---------CCCCEEEEcCCCCCcC
Confidence 34579999982 2221 2347899999998753
No 486
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=78.08 E-value=15 Score=31.92 Aligned_cols=103 Identities=15% Similarity=0.250 Sum_probs=63.4
Q ss_pred CCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHH-HHHHHHHHHhhcCCCCCCCEEEEEecCCCCC-----CC---
Q 018003 178 GGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSEN-MLKQCYEFVQQESNFPKENFLLVRADISRLP-----FA--- 245 (362)
Q Consensus 178 ~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~-~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p-----~~--- 245 (362)
++++|=.|++.|. ++..|++.|. +|+.++.+.. ..+...+.+... ..++.++.+|+.+.. +.
T Consensus 29 ~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~ 102 (283)
T 1g0o_A 29 GKVALVTGAGRGIGREMAMELGRRGC--KVIVNYANSTESAEEVVAAIKKN----GSDAACVKANVGVVEDIVRMFEEAV 102 (283)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHT----TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCchHHHHHHHHHHHHh----CCCeEEEEcCCCCHHHHHHHHHHHH
Confidence 5678888876552 3455556665 8999988754 334444444433 357888999987632 00
Q ss_pred --CCcceEEEecccccCCC-----CHH--------------HHHHHHHhhccCCcEEEEEEE
Q 018003 246 --SSSIDAVHAGAAIHCWS-----SPS--------------TGVAEISRVLRPGGVFVGTTY 286 (362)
Q Consensus 246 --~~~fD~V~~~~vl~h~~-----d~~--------------~~l~~i~r~LkpgG~li~~~~ 286 (362)
-+..|+++.+..+.... ++. .+++.+.+.|+.+|.++....
T Consensus 103 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS 164 (283)
T 1g0o_A 103 KIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGS 164 (283)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECC
T ss_pred HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEec
Confidence 14689999887654321 111 245666677777788876643
No 487
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=77.97 E-value=24 Score=29.51 Aligned_cols=78 Identities=15% Similarity=0.189 Sum_probs=53.9
Q ss_pred CCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHh-hcCCCCCCCEEEEEecCCCCC-----CC---
Q 018003 178 GGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQ-QESNFPKENFLLVRADISRLP-----FA--- 245 (362)
Q Consensus 178 ~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~-~~~~~~~~~~~~~~~d~~~~p-----~~--- 245 (362)
++++|=.|++.|. +...+++.|. +|+.++.+++.++...+.+. .. ..++.++.+|+.+.. +.
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~~ 75 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARDGY--ALALGARSVDRLEKIAHELMQEQ----GVEVFYHHLDVSKAESVEEFSKKVL 75 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHH----CCCEEEEECCTTCHHHHHHHCC-HH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhc----CCeEEEEEeccCCHHHHHHHHHHHH
Confidence 4578888876542 4555666676 89999999887777666554 32 467889999997642 11
Q ss_pred --CCcceEEEecccccCC
Q 018003 246 --SSSIDAVHAGAAIHCW 261 (362)
Q Consensus 246 --~~~fD~V~~~~vl~h~ 261 (362)
-+..|+++.+..+.+.
T Consensus 76 ~~~g~id~li~~Ag~~~~ 93 (235)
T 3l77_A 76 ERFGDVDVVVANAGLGYF 93 (235)
T ss_dssp HHHSSCSEEEECCCCCCC
T ss_pred HhcCCCCEEEECCccccc
Confidence 1368999988776443
No 488
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=77.80 E-value=1.7 Score=40.42 Aligned_cols=42 Identities=21% Similarity=0.112 Sum_probs=30.7
Q ss_pred CCCeEEEEcCcc-chHHHHHHHhCCCCEEEEEeCCHHHHHHHHH
Q 018003 177 LGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYE 219 (362)
Q Consensus 177 ~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~ 219 (362)
++.+|+=+|+|. |.....+++.. +.+|+++|.++...+.+++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~-Ga~V~~~d~~~~~~~~~~~ 213 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRL-GAVVMATDVRAATKEQVES 213 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCSTTHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH
Confidence 578999999986 65555555442 2489999999877766654
No 489
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=77.44 E-value=5.9 Score=34.47 Aligned_cols=78 Identities=17% Similarity=0.204 Sum_probs=49.7
Q ss_pred CCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC-----CC----
Q 018003 178 GGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----FA---- 245 (362)
Q Consensus 178 ~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p-----~~---- 245 (362)
++++|=.|++.|. +...|++.|. +|+.++.+++.++...+.+... .....++.++.+|+.+.. +.
T Consensus 6 ~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (278)
T 1spx_A 6 EKVAIITGSSNGIGRATAVLFAREGA--KVTITGRHAERLEETRQQILAA-GVSEQNVNSVVADVTTDAGQDEILSTTLG 82 (278)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT-TCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc-ccCCCceeEEecccCCHHHHHHHHHHHHH
Confidence 5678888876542 3455566665 9999999988777666554211 001346888999987642 10
Q ss_pred -CCcceEEEecccc
Q 018003 246 -SSSIDAVHAGAAI 258 (362)
Q Consensus 246 -~~~fD~V~~~~vl 258 (362)
-+..|+++.+..+
T Consensus 83 ~~g~id~lv~~Ag~ 96 (278)
T 1spx_A 83 KFGKLDILVNNAGA 96 (278)
T ss_dssp HHSCCCEEEECCC-
T ss_pred HcCCCCEEEECCCC
Confidence 1368999987654
No 490
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=77.28 E-value=0.8 Score=30.09 Aligned_cols=41 Identities=15% Similarity=0.438 Sum_probs=25.7
Q ss_pred CCeeeCCCCCCCcccccCCCCccccccCCceecCccCcccccC
Q 018003 69 KNVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSGV 111 (362)
Q Consensus 69 ~~~l~CP~C~~~l~~~~~~~~~~~~~~~~~l~C~~C~~~~~~~ 111 (362)
...+.|+.|+..+..... ...-......+.|+.|+..|...
T Consensus 12 ~k~~~C~~C~k~F~~~~~--l~~~H~~~k~~~C~~C~k~f~~~ 52 (62)
T 1vd4_A 12 RASFKCPVCSSTFTDLEA--NQLFDPMTGTFRCTFCHTEVEED 52 (62)
T ss_dssp SSEEECSSSCCEEEHHHH--HHHEETTTTEEBCSSSCCBCEEC
T ss_pred CCCccCCCCCchhccHHH--hHhhcCCCCCEECCCCCCccccC
Confidence 456899999986543220 00111223579999999988763
No 491
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=77.14 E-value=1.8 Score=26.89 Aligned_cols=36 Identities=11% Similarity=0.146 Sum_probs=19.4
Q ss_pred CeeeCCCCCCCcccccCCCCccccccCCceecCccCc
Q 018003 70 NVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKK 106 (362)
Q Consensus 70 ~~l~CP~C~~~l~~~~~~~~~~~~~~~~~l~C~~C~~ 106 (362)
...+|++||....... +..+.-......++|+.||.
T Consensus 3 ~~y~C~vCGyvyd~~~-Gd~t~f~~lP~dw~CP~Cg~ 38 (46)
T 6rxn_A 3 QKYVCNVCGYEYDPAE-HDNVPFDQLPDDWCCPVCGV 38 (46)
T ss_dssp CCEEETTTCCEECGGG-GTTCCGGGSCTTCBCTTTCC
T ss_pred CEEECCCCCeEEeCCc-CCCcchhhCCCCCcCcCCCC
Confidence 4578999997543211 00011111234579999986
No 492
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=77.12 E-value=2 Score=33.58 Aligned_cols=41 Identities=17% Similarity=0.323 Sum_probs=31.3
Q ss_pred CCCCCcceEEEeccccc--CCCCHHHHHHHHHhhccCCcEEEE
Q 018003 243 PFASSSIDAVHAGAAIH--CWSSPSTGVAEISRVLRPGGVFVG 283 (362)
Q Consensus 243 p~~~~~fD~V~~~~vl~--h~~d~~~~l~~i~r~LkpgG~li~ 283 (362)
.+++.+||.|+...--+ +..-|..++..+.+.|||||.|..
T Consensus 54 sLp~stYD~V~~lt~~~~~~~~l~r~li~~l~~aLkpgG~L~g 96 (136)
T 2km1_A 54 TLENAKYETVHYLTPEAQTDIKFPKKLISVLADSLKPNGSLIG 96 (136)
T ss_dssp CCCSSSCCSEEEECCCSSCSCCCCHHHHHHHHTTCCTTCCEEC
T ss_pred cCCcccccEEEEecCCccchhhcCHHHHHHHHHHhCCCCEEEe
Confidence 35688999998654322 234468999999999999999984
No 493
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=77.02 E-value=15 Score=32.05 Aligned_cols=75 Identities=11% Similarity=0.122 Sum_probs=50.7
Q ss_pred CCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCH-HHHHHHHHHHh-hcCCCCCCCEEEEEecCCC----CC-----
Q 018003 178 GGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSE-NMLKQCYEFVQ-QESNFPKENFLLVRADISR----LP----- 243 (362)
Q Consensus 178 ~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~-~~~~~a~~~~~-~~~~~~~~~~~~~~~d~~~----~p----- 243 (362)
++++|=.|++.|. ++..|++.|. +|+.++.++ +.++...+.+. .. ..++.++.+|+.+ ..
T Consensus 23 ~k~~lVTGas~gIG~aia~~L~~~G~--~V~~~~r~~~~~~~~~~~~l~~~~----~~~~~~~~~Dv~~~~~~~~~v~~~ 96 (288)
T 2x9g_A 23 APAAVVTGAAKRIGRAIAVKLHQTGY--RVVIHYHNSAEAAVSLADELNKER----SNTAVVCQADLTNSNVLPASCEEI 96 (288)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHHTC--EEEEEESSCHHHHHHHHHHHHHHS----TTCEEEEECCCSCSTTHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC--eEEEEeCCchHHHHHHHHHHHhhc----CCceEEEEeecCCccCCHHHHHHH
Confidence 5688888877652 4555666676 899999987 66665555554 22 3578899999987 21
Q ss_pred C-----CCCcceEEEecccc
Q 018003 244 F-----ASSSIDAVHAGAAI 258 (362)
Q Consensus 244 ~-----~~~~fD~V~~~~vl 258 (362)
+ .-+..|+++.+..+
T Consensus 97 ~~~~~~~~g~iD~lvnnAG~ 116 (288)
T 2x9g_A 97 INSCFRAFGRCDVLVNNASA 116 (288)
T ss_dssp HHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHhcCCCCEEEECCCC
Confidence 0 01468999987765
No 494
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=76.86 E-value=11 Score=34.19 Aligned_cols=99 Identities=12% Similarity=0.109 Sum_probs=54.6
Q ss_pred HHhhcCCCCCCeEEEEcC--ccchHHHHHHHhCCCCEEEEE-eCCHH---HHHHHHHHHhhcCCCCCCCEEEEEe-----
Q 018003 169 MKGYLKPVLGGNIIDASC--GSGLFSRIFAKSGLFSLVVAL-DYSEN---MLKQCYEFVQQESNFPKENFLLVRA----- 237 (362)
Q Consensus 169 l~~~l~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~gv-D~s~~---~~~~a~~~~~~~~~~~~~~~~~~~~----- 237 (362)
+.+.....++.+||-+|+ |.|.++..+++.. +.+++++ +.++. ..+.+++. ... .++..
T Consensus 159 l~~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~-Ga~vi~~~~~~~~~~~~~~~~~~l--------Ga~-~vi~~~~~~~ 228 (357)
T 1zsy_A 159 LMDFEQLQPGDSVIQNASNSGVGQAVIQIAAAL-GLRTINVVRDRPDIQKLSDRLKSL--------GAE-HVITEEELRR 228 (357)
T ss_dssp HHHSSCCCTTCEEEESSTTSHHHHHHHHHHHHH-TCEEEEEECCCSCHHHHHHHHHHT--------TCS-EEEEHHHHHS
T ss_pred HHHHhccCCCCEEEEeCCcCHHHHHHHHHHHHc-CCEEEEEecCccchHHHHHHHHhc--------CCc-EEEecCcchH
Confidence 334446677999999997 3588888887752 2355554 44432 34455431 111 12221
Q ss_pred -cCCCCCCCCCcceEEEecccccCCCCHHHHHHHHHhhccCCcEEEEE
Q 018003 238 -DISRLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGT 284 (362)
Q Consensus 238 -d~~~~p~~~~~fD~V~~~~vl~h~~d~~~~l~~i~r~LkpgG~li~~ 284 (362)
++.+..-..+.+|+|+-. ...+. +.+..++|++||+++..
T Consensus 229 ~~~~~~~~~~~~~Dvvid~-----~g~~~--~~~~~~~l~~~G~iv~~ 269 (357)
T 1zsy_A 229 PEMKNFFKDMPQPRLALNC-----VGGKS--STELLRQLARGGTMVTY 269 (357)
T ss_dssp GGGGGTTSSSCCCSEEEES-----SCHHH--HHHHHTTSCTTCEEEEC
T ss_pred HHHHHHHhCCCCceEEEEC-----CCcHH--HHHHHHhhCCCCEEEEE
Confidence 111111011248988743 33322 34678999999999875
No 495
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=76.78 E-value=27 Score=29.73 Aligned_cols=77 Identities=18% Similarity=0.236 Sum_probs=52.8
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecC--CCCC--------
Q 018003 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADI--SRLP-------- 243 (362)
Q Consensus 177 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~--~~~p-------- 243 (362)
.++++|=.|++.|. +...|++.|. +|+.++.+++.++...+.+... ...++.++.+|+ .+..
T Consensus 11 ~~k~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (252)
T 3f1l_A 11 NDRIILVTGASDGIGREAAMTYARYGA--TVILLGRNEEKLRQVASHINEE---TGRQPQWFILDLLTCTSENCQQLAQR 85 (252)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHH---HSCCCEEEECCTTTCCHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhh---cCCCceEEEEecccCCHHHHHHHHHH
Confidence 36788888887653 4555666676 9999999998877776665543 123678889998 4321
Q ss_pred --CCCCcceEEEecccc
Q 018003 244 --FASSSIDAVHAGAAI 258 (362)
Q Consensus 244 --~~~~~fD~V~~~~vl 258 (362)
-..+..|+++.+..+
T Consensus 86 ~~~~~g~id~lv~nAg~ 102 (252)
T 3f1l_A 86 IAVNYPRLDGVLHNAGL 102 (252)
T ss_dssp HHHHCSCCSEEEECCCC
T ss_pred HHHhCCCCCEEEECCcc
Confidence 012468999988765
No 496
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=76.60 E-value=18 Score=31.26 Aligned_cols=78 Identities=17% Similarity=0.168 Sum_probs=53.2
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeC-CHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC-----C---
Q 018003 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDY-SENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F--- 244 (362)
Q Consensus 177 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~-s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p-----~--- 244 (362)
.++++|=.|++.|. ++..|++.|. +|+.++. ++..++...+.+... ..++.++.+|+.+.. +
T Consensus 27 ~~k~vlVTGas~gIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~D~~d~~~v~~~~~~~ 100 (269)
T 4dmm_A 27 TDRIALVTGASRGIGRAIALELAAAGA--KVAVNYASSAGAADEVVAAIAAA----GGEAFAVKADVSQESEVEALFAAV 100 (269)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHT----TCCEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCChHHHHHHHHHHHhc----CCcEEEEECCCCCHHHHHHHHHHH
Confidence 36688888876653 4556666676 8998888 666666666665554 467889999997642 0
Q ss_pred --CCCcceEEEecccccC
Q 018003 245 --ASSSIDAVHAGAAIHC 260 (362)
Q Consensus 245 --~~~~fD~V~~~~vl~h 260 (362)
.-+..|+++.+..+..
T Consensus 101 ~~~~g~id~lv~nAg~~~ 118 (269)
T 4dmm_A 101 IERWGRLDVLVNNAGITR 118 (269)
T ss_dssp HHHHSCCCEEEECCCCCC
T ss_pred HHHcCCCCEEEECCCCCC
Confidence 1136899998876543
No 497
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=76.51 E-value=10 Score=32.67 Aligned_cols=103 Identities=14% Similarity=0.126 Sum_probs=63.5
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCC---HHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC-----C-
Q 018003 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYS---ENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F- 244 (362)
Q Consensus 177 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s---~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p-----~- 244 (362)
.++++|=.|++.|. ++..|++.|. +|+.++.+ .+.++...+.+... ..++.++.+|+.+.. +
T Consensus 10 ~~k~vlVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~----~~~~~~~~~Dv~d~~~v~~~~~ 83 (262)
T 3ksu_A 10 KNKVIVIAGGIKNLGALTAKTFALESV--NLVLHYHQAKDSDTANKLKDELEDQ----GAKVALYQSDLSNEEEVAKLFD 83 (262)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHTTSSC--EEEEEESCGGGHHHHHHHHHHHHTT----TCEEEEEECCCCSHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEecCccCHHHHHHHHHHHHhc----CCcEEEEECCCCCHHHHHHHHH
Confidence 46788988887653 3344444555 89988764 33455555555443 457889999997642 0
Q ss_pred ----CCCcceEEEecccccCCC-----CHH--------------HHHHHHHhhccCCcEEEEEE
Q 018003 245 ----ASSSIDAVHAGAAIHCWS-----SPS--------------TGVAEISRVLRPGGVFVGTT 285 (362)
Q Consensus 245 ----~~~~fD~V~~~~vl~h~~-----d~~--------------~~l~~i~r~LkpgG~li~~~ 285 (362)
.-+..|+++.+..+.... ++. .+++.+.+.++++|.++...
T Consensus 84 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~is 147 (262)
T 3ksu_A 84 FAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIA 147 (262)
T ss_dssp HHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEEC
T ss_pred HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEe
Confidence 114689999887653321 111 34556666777788877654
No 498
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=76.26 E-value=37 Score=29.24 Aligned_cols=70 Identities=17% Similarity=0.128 Sum_probs=49.9
Q ss_pred CCCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC---------C
Q 018003 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP---------F 244 (362)
Q Consensus 177 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p---------~ 244 (362)
.++++|=.|++.|. ++..|++.|. +|+.+|.+++.++...+.+ ..++.++.+|+.+.. -
T Consensus 29 ~~k~vlVTGas~GIG~aia~~l~~~G~--~Vi~~~r~~~~~~~~~~~~-------~~~~~~~~~Dl~~~~~v~~~~~~~~ 99 (281)
T 3ppi_A 29 EGASAIVSGGAGGLGEATVRRLHADGL--GVVIADLAAEKGKALADEL-------GNRAEFVSTNVTSEDSVLAAIEAAN 99 (281)
T ss_dssp TTEEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHH-------CTTEEEEECCTTCHHHHHHHHHHHT
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHh-------CCceEEEEcCCCCHHHHHHHHHHHH
Confidence 35688888887653 4556666676 9999999988777666543 357889999997642 1
Q ss_pred CCCcceEEEec
Q 018003 245 ASSSIDAVHAG 255 (362)
Q Consensus 245 ~~~~fD~V~~~ 255 (362)
..+..|+++.+
T Consensus 100 ~~~~id~lv~~ 110 (281)
T 3ppi_A 100 QLGRLRYAVVA 110 (281)
T ss_dssp TSSEEEEEEEC
T ss_pred HhCCCCeEEEc
Confidence 12468988877
No 499
>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious electron transport, iron; NMR {Mycobacterium tuberculosis}
Probab=76.15 E-value=4.4 Score=28.50 Aligned_cols=41 Identities=10% Similarity=0.225 Sum_probs=21.9
Q ss_pred cccCCeeeCCCCCCCccccc---CCCCccc---cccCCceecCccCc
Q 018003 66 STSKNVLACPICYKPLTWIG---DSSLSIE---SAAGSSLQCNTCKK 106 (362)
Q Consensus 66 ~~~~~~l~CP~C~~~l~~~~---~~~~~~~---~~~~~~l~C~~C~~ 106 (362)
......+.|++||....... ...+..+ ......++|+.|+.
T Consensus 22 ~~em~~y~C~vCGyvYD~~~Gdp~~gI~pGT~fedlPddW~CPvCga 68 (81)
T 2kn9_A 22 MNDYKLFRCIQCGFEYDEALGWPEDGIAAGTRWDDIPDDWSCPDCGA 68 (81)
T ss_dssp SSCCCEEEETTTCCEEETTTCBTTTTBCTTCCTTTSCTTCCCTTTCC
T ss_pred CCCcceEEeCCCCEEEcCCcCCcccCcCCCCChhHCCCCCcCCCCCC
Confidence 34456899999997432211 0000000 11124579999996
No 500
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=75.77 E-value=28 Score=30.06 Aligned_cols=78 Identities=17% Similarity=0.215 Sum_probs=51.1
Q ss_pred CCeEEEEcCccch---HHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHhhcCCCCCCCEEEEEecCCCCC-----CC----
Q 018003 178 GGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----FA---- 245 (362)
Q Consensus 178 ~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~d~~~~p-----~~---- 245 (362)
++++|=.|++.|. ++..|++.|. +|++++.++..++...+.+... +...++.++.+|+.+.. +.
T Consensus 32 ~k~vlVTGasggIG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 107 (279)
T 1xg5_A 32 DRLALVTGASGGIGAAVARALVQQGL--KVVGCARTVGNIEELAAECKSA--GYPGTLIPYRCDLSNEEDILSMFSAIRS 107 (279)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT--TCSSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEECChHHHHHHHHHHHhc--CCCceEEEEEecCCCHHHHHHHHHHHHH
Confidence 5688888876542 3455556665 9999999987776666555443 11245788899987642 00
Q ss_pred -CCcceEEEeccccc
Q 018003 246 -SSSIDAVHAGAAIH 259 (362)
Q Consensus 246 -~~~fD~V~~~~vl~ 259 (362)
.+.+|+|+.+..+.
T Consensus 108 ~~g~iD~vi~~Ag~~ 122 (279)
T 1xg5_A 108 QHSGVDICINNAGLA 122 (279)
T ss_dssp HHCCCSEEEECCCCC
T ss_pred hCCCCCEEEECCCCC
Confidence 13689999876643
Done!