Query 018004
Match_columns 362
No_of_seqs 225 out of 1677
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 08:22:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018004.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018004hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vla_A EDGP; extracellular, in 100.0 9.9E-45 3.4E-49 351.9 23.7 261 72-354 18-317 (413)
2 3psg_A Pepsinogen; hydrolase(a 100.0 2.5E-44 8.6E-49 344.7 18.0 220 70-335 52-283 (370)
3 2x0b_A Renin; hydrolase-hormon 100.0 3.8E-44 1.3E-48 344.4 14.9 217 70-335 57-293 (383)
4 1b5f_A Protein (cardosin A); h 100.0 8.7E-44 3E-48 321.2 15.8 216 70-333 9-238 (239)
5 2apr_A Rhizopuspepsin; hydrola 100.0 6.7E-43 2.3E-47 329.5 20.1 220 71-338 12-245 (325)
6 1tzs_A Cathepsin E; hydrolase, 100.0 4.5E-42 1.5E-46 327.2 21.4 218 70-335 19-252 (351)
7 3aup_A SBG7S, BG, basic 7S glo 100.0 1.4E-41 4.7E-46 329.6 23.8 260 71-353 18-308 (403)
8 4aa9_A Chymosin; hydrolase, as 100.0 2.5E-42 8.7E-47 324.9 16.6 220 70-335 7-237 (320)
9 3cms_A Chymosin B; hydrolase, 100.0 3.1E-42 1.1E-46 324.7 16.6 217 70-334 10-239 (323)
10 1mpp_A Pepsin; hydrolase(acid 100.0 1.4E-41 4.9E-46 324.9 21.5 219 70-335 14-261 (361)
11 1am5_A Pepsin, acid proteinase 100.0 5.6E-42 1.9E-46 323.1 17.1 216 70-334 8-237 (324)
12 1htr_B Gastricsin; aspartyl pr 100.0 1.7E-41 5.8E-46 320.5 19.6 218 71-335 9-241 (329)
13 1qdm_A Prophytepsin; aspartic 100.0 2E-41 6.8E-46 334.0 20.1 221 70-334 48-282 (478)
14 1dpj_A Proteinase A; proteinas 100.0 1E-41 3.5E-46 322.0 17.3 215 70-334 9-241 (329)
15 1j71_A Candidapepsin, aspartic 100.0 1.9E-41 6.7E-46 320.7 19.0 215 72-335 10-242 (334)
16 2qzx_A Candidapepsin-5; aspart 100.0 2.4E-41 8.3E-46 321.0 19.2 215 72-335 10-242 (342)
17 3c9x_A Trichoderma reesei aspa 100.0 1.2E-41 4.1E-46 321.5 16.8 215 71-332 12-240 (329)
18 1oew_A Endothiapepsin; hydrola 100.0 1.7E-41 5.9E-46 320.4 16.8 213 72-332 13-239 (329)
19 3k1w_A Renin; protease, altern 100.0 3.4E-41 1.2E-45 319.8 17.1 220 70-335 14-250 (341)
20 3pvk_A Candidapepsin-2; hydrol 100.0 1E-40 3.5E-45 316.7 19.6 216 72-335 10-242 (342)
21 3fv3_A SAPP1P-secreted asparti 100.0 1.8E-40 6E-45 314.8 20.6 209 72-336 10-245 (339)
22 3lpj_A Beta-secretase 1; alzhe 100.0 3.8E-40 1.3E-44 324.2 23.1 238 72-353 72-335 (455)
23 1miq_A Plasmepsin; aspartic pr 100.0 5.2E-41 1.8E-45 322.2 14.6 212 70-336 58-287 (375)
24 2ewy_A Beta-secretase 2; BACE2 100.0 6.5E-40 2.2E-44 315.9 21.0 221 72-336 11-251 (383)
25 3qvc_A Histo-aspartic protease 100.0 1.9E-40 6.5E-45 324.3 17.4 212 70-336 133-362 (451)
26 3vf3_A Beta-secretase 1; struc 100.0 2.8E-39 9.7E-44 313.3 23.7 237 72-353 26-289 (402)
27 1t6e_X Xylanase inhibitor; two 100.0 1.5E-39 5.2E-44 313.0 21.6 252 70-354 10-287 (381)
28 2qp8_A Beta-secretase 1; BACE1 100.0 2.5E-39 8.5E-44 313.0 22.9 220 72-336 19-262 (395)
29 2bju_A Plasmepsin II; aspartic 100.0 1.7E-40 5.9E-45 324.4 12.2 212 70-334 134-361 (453)
30 1yg9_A Aspartic protease BLA G 100.0 9.8E-40 3.4E-44 308.4 16.9 215 70-335 13-243 (330)
31 1ibq_A Aspergillopepsin; aspar 100.0 2.7E-39 9.3E-44 304.8 17.4 210 72-332 12-235 (325)
32 1izd_A Aspartic proteinase; su 100.0 9.1E-39 3.1E-43 300.9 16.8 210 72-332 13-235 (323)
33 1bxo_A Protein (penicillopepsi 100.0 1.3E-38 4.4E-43 300.0 13.7 208 72-332 13-234 (323)
34 1wkr_A Polyporopepsin; hydrola 100.0 1.3E-37 4.5E-42 295.1 19.7 200 73-336 11-237 (340)
35 1lya_A Cathepsin D; lysosomal 99.9 7.7E-23 2.6E-27 157.4 7.1 84 70-183 9-96 (97)
36 1lya_B Cathepsin D; lysosomal 99.8 4.4E-21 1.5E-25 172.7 12.8 132 194-335 5-150 (241)
37 2hs1_A HIV-1 protease; ultra-h 87.6 0.68 2.3E-05 34.6 4.4 28 77-106 10-37 (99)
38 1fmb_A EIAV protease; hydrolas 85.8 0.77 2.6E-05 34.6 3.9 27 76-104 9-35 (104)
39 3ec0_A Protease; HIV-2, inhibi 84.9 1.1 3.8E-05 33.3 4.4 28 77-106 10-37 (99)
40 2i1a_A DNA damage-inducible pr 84.3 0.89 3E-05 36.3 4.0 31 72-104 23-53 (148)
41 3s8i_A Protein DDI1 homolog 1; 81.0 1.2 4E-05 35.9 3.4 29 286-327 29-57 (148)
42 2i1a_A DNA damage-inducible pr 80.6 1.7 5.9E-05 34.6 4.4 29 286-327 31-59 (148)
43 3liy_A Protease; hydrolase, hy 78.8 1.7 5.7E-05 33.2 3.4 31 77-107 12-45 (116)
44 3s8i_A Protein DDI1 homolog 1; 77.6 1.9 6.6E-05 34.6 3.7 32 72-105 21-52 (148)
45 2hah_A Protease, retropepsin; 77.2 2.2 7.4E-05 32.8 3.7 26 76-104 15-40 (116)
46 3sqf_A Protease; folded monome 74.3 3 0.0001 31.8 3.8 30 76-107 10-39 (114)
47 3slz_A GAG-Pro-POL polyprotein 70.2 5.3 0.00018 31.4 4.4 32 73-106 20-51 (132)
48 2rsp_A RSV protease; hydrolase 61.8 7.8 0.00027 30.0 3.8 24 82-107 27-50 (124)
49 1lya_A Cathepsin D; lysosomal 61.5 6.4 0.00022 28.9 3.2 16 308-323 30-45 (97)
50 3ka2_A [L-Ala51;Gly51']HIV-1 p 59.5 10 0.00034 32.1 4.4 28 76-105 9-36 (203)
51 2hs1_A HIV-1 protease; ultra-h 46.5 11 0.00037 27.9 2.3 30 279-321 6-35 (99)
52 1fmb_A EIAV protease; hydrolas 46.3 12 0.0004 28.0 2.5 33 279-324 6-38 (104)
53 2hah_A Protease, retropepsin; 45.4 13 0.00046 28.3 2.7 31 277-321 10-40 (116)
54 3ec0_A Protease; HIV-2, inhibi 44.8 12 0.00042 27.6 2.4 30 278-320 5-34 (99)
55 3slz_A GAG-Pro-POL polyprotein 42.4 21 0.00072 27.9 3.5 27 283-322 24-50 (132)
56 3ka2_A [L-Ala51;Gly51']HIV-1 p 40.0 32 0.0011 28.9 4.5 28 76-105 113-140 (203)
57 3fv3_A SAPP1P-secreted asparti 38.8 15 0.00051 33.2 2.5 39 270-322 5-43 (339)
58 1j71_A Candidapepsin, aspartic 36.9 17 0.00058 32.9 2.5 15 308-322 29-43 (334)
59 1wkr_A Polyporopepsin; hydrola 35.8 20 0.0007 32.4 2.9 15 308-322 29-43 (340)
60 1bxo_A Protein (penicillopepsi 35.2 27 0.00092 31.3 3.6 40 268-324 7-46 (323)
61 1izd_A Aspartic proteinase; su 33.8 29 0.001 31.1 3.6 40 268-324 7-46 (323)
62 2qzx_A Candidapepsin-5; aspart 33.6 20 0.0007 32.4 2.5 15 308-322 29-43 (342)
63 3pvk_A Candidapepsin-2; hydrol 32.7 22 0.00074 32.1 2.5 15 308-322 29-43 (342)
64 1yg9_A Aspartic protease BLA G 31.8 29 0.001 31.3 3.2 30 277-322 17-46 (330)
65 1ibq_A Aspergillopepsin; aspar 31.4 30 0.001 31.1 3.2 40 268-324 6-45 (325)
66 1b5f_A Protein (cardosin A); h 29.4 36 0.0012 29.1 3.2 15 308-322 30-44 (239)
67 3cms_A Chymosin B; hydrolase, 27.8 38 0.0013 30.3 3.2 15 308-322 31-45 (323)
68 3c9x_A Trichoderma reesei aspa 26.8 46 0.0016 29.9 3.6 17 308-324 32-48 (329)
69 1htr_B Gastricsin; aspartyl pr 26.3 38 0.0013 30.4 3.0 15 308-322 29-43 (329)
70 1oew_A Endothiapepsin; hydrola 26.0 48 0.0016 29.7 3.6 16 308-323 32-47 (329)
71 2apr_A Rhizopuspepsin; hydrola 25.8 43 0.0015 30.0 3.3 15 308-322 32-46 (325)
72 3sqf_A Protease; folded monome 25.7 59 0.002 24.6 3.4 26 283-321 11-36 (114)
73 1lya_B Cathepsin D; lysosomal 25.1 62 0.0021 27.3 4.0 32 74-105 99-137 (241)
74 1mpp_A Pepsin; hydrolase(acid 23.0 52 0.0018 29.9 3.3 42 265-322 5-49 (361)
75 1dpj_A Proteinase A; proteinas 22.9 53 0.0018 29.4 3.2 15 308-322 30-44 (329)
76 3liy_A Protease; hydrolase, hy 22.8 42 0.0014 25.4 2.1 27 282-321 11-42 (116)
77 3aup_A SBG7S, BG, basic 7S glo 21.3 58 0.002 30.2 3.2 15 308-322 38-52 (403)
78 2qp8_A Beta-secretase 1; BACE1 21.2 58 0.002 30.0 3.2 15 308-322 38-52 (395)
79 1am5_A Pepsin, acid proteinase 20.8 70 0.0024 28.5 3.6 15 308-322 29-43 (324)
80 2ewy_A Beta-secretase 2; BACE2 20.3 63 0.0021 29.6 3.2 15 308-322 30-44 (383)
81 4aa9_A Chymosin; hydrolase, as 20.2 65 0.0022 28.6 3.2 15 308-322 28-42 (320)
82 2rsp_A RSV protease; hydrolase 20.2 36 0.0012 26.2 1.3 14 308-321 34-47 (124)
No 1
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=9.9e-45 Score=351.92 Aligned_cols=261 Identities=23% Similarity=0.368 Sum_probs=210.9
Q ss_pred CcccEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCCCCCCCCCCccCCcccCCCCCccceecCCCcccCCCCCCC---
Q 018004 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGP--- 148 (362)
Q Consensus 72 ~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~~c~~C~~~~~~~~~~~~y~~~~Sst~~~v~c~~~~C~~~~~~~--- 148 (362)
.+++|+++|.||||+|+|.|+|||||+++||+|..| .+|+|++.++|.++.|.......
T Consensus 18 ~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~~c------------------~~Sst~~~v~C~s~~C~~~~~~~~~~ 79 (413)
T 3vla_A 18 STLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQN------------------YVSSTYRPVRCRTSQCSLSGSIACGD 79 (413)
T ss_dssp TTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSS------------------CCCTTCEECBTTSHHHHHTTCCEEEC
T ss_pred CCCeEEEEEEcCCCCcceEEEEeCCChhhhcccCCC------------------CCCCCcCccCCCcccccccccCCCcc
Confidence 578999999999999999999999999999998764 36999999999999998765432
Q ss_pred -----CCCCCCCCCCcceeee-CCCCeEEEEEEEEEEEEecccCCccc-cccCceeeEEeeeeccCCCCCCCCcCcceee
Q 018004 149 -----LTDCTANTSCPYLEIY-GDGSSTTGYFVQDVVQYDKVSGDLQT-TSTNGSLIFGCGARQSGNLDSTNEEALDGII 221 (362)
Q Consensus 149 -----~~~c~~~~~~~~~~~Y-~~g~~~~G~~~~D~v~i~~~~~~~~~-~~~~~~~~fg~~~~~~~~~~~~~~~~~~Gil 221 (362)
...|. ++.|.|.+.| ++|+.+.|++++|+|+|++..+.... ...++++.|||+..+.... ....++|||
T Consensus 80 c~s~~~~~c~-~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g---~~~~~dGIl 155 (413)
T 3vla_A 80 CFNGPRPGCN-NNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQN---LASGVVGMA 155 (413)
T ss_dssp CSSCCBTTBC-SSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTT---SCTTCCEEE
T ss_pred cccCCCCCCC-CCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccC---ccccccccc
Confidence 23454 3579999999 47777799999999999864333210 1246789999999863211 124689999
Q ss_pred ecCCCCCcHHHHhhhcCCCCCceEEeccCC-CCcceEEeCCCCC---------CC-ceEecCcCCC-------------C
Q 018004 222 GFGKSNSSMISQLASSGGVRKMFAHCLDGI-NGGGIFAIGHVVQ---------PE-VNKTPLVPNQ-------------P 277 (362)
Q Consensus 222 GLg~~~~s~~~~l~~~~~i~~~Fs~~l~~~-~~~G~l~fGg~d~---------~~-~~~~p~~~~~-------------~ 277 (362)
|||++.+|++.||.++++|+++||+||.+. ..+|.|+||++|. ++ +.|+||+.++ .
T Consensus 156 GLg~~~lSl~sql~~~~~i~~~FS~cL~~~~~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~~~~~~~ 235 (413)
T 3vla_A 156 GLGRTRIALPSQFASAFSFKRKFAMCLSGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGEPSV 235 (413)
T ss_dssp ECSSSSSSHHHHHHHHHTCCSEEEEECCSCSSSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCCTTCCCC
T ss_pred ccCCCCcchHHHHhhhcCCCceEEEeCCCCCCCceEEEECCCcccccccccccCCceeEeecccCCccccccccccCCCc
Confidence 999999999999999998899999999984 5679999999874 35 9999998653 6
Q ss_pred ceEEEEeEEEEcCEEeeCCCcccccC--CCccEEEcccccccccChHHHHHHHHHHHHhCC--CCcc-cccCCcCceeec
Q 018004 278 HYSINMTAVQVGLDFLNLPTDVFGVG--DNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQP--DLKV-HTVHDEYTCFQY 352 (362)
Q Consensus 278 ~w~v~l~~i~v~~~~~~~~~~~~~~~--~~~~aiiDSGtt~~~lp~~~~~~i~~~~~~~~~--~~~~-~~~~~~~~C~~~ 352 (362)
+|+|.|++|+|+++.+.++...|..+ +.+++||||||++++||+++|++|+++|.+++. +... .....+..||+.
T Consensus 236 ~y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~~~~~~~~~~~~~~~~C~~~ 315 (413)
T 3vla_A 236 EYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNITRVASVAPFGACFST 315 (413)
T ss_dssp SCEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHHHTTCCEECCCTTCSCEEEC
T ss_pred eEEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhcccCCCcCCCCCCCcceecc
Confidence 99999999999999998877766543 357899999999999999999999999999864 2221 223345789997
Q ss_pred cC
Q 018004 353 SE 354 (362)
Q Consensus 353 ~~ 354 (362)
+.
T Consensus 316 ~~ 317 (413)
T 3vla_A 316 DN 317 (413)
T ss_dssp TT
T ss_pred CC
Confidence 64
No 2
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=2.5e-44 Score=344.70 Aligned_cols=220 Identities=26% Similarity=0.405 Sum_probs=187.4
Q ss_pred CCCcccEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCCCCCCCCCCccCCcccCCCCCccceecCCCcccCCCCCCCC
Q 018004 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPL 149 (362)
Q Consensus 70 ~~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~~c~~C~~~~~~~~~~~~y~~~~Sst~~~v~c~~~~C~~~~~~~~ 149 (362)
++.+.+|+++|+||||||+|+|+|||||+++||+|..|..| .|..++.|||++|+|++..
T Consensus 52 n~~d~~Y~~~i~iGTPpQ~~~v~~DTGSs~lWV~s~~C~~~-----~C~~~~~y~~~~SsT~~~~--------------- 111 (370)
T 3psg_A 52 NYLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCSSL-----ACSDHNQFNPDDSSTFEAT--------------- 111 (370)
T ss_dssp GGTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSG-----GGTTSCCBCGGGCTTCEEE---------------
T ss_pred eccCCEEEEEEEEcCCCCEEEEEEeCCCCccEEECCCCCCc-----ccCCCCCCCCccCcCcEEC---------------
Confidence 67889999999999999999999999999999999998643 2334589999999999984
Q ss_pred CCCCCCCCCcceeeeCCCCeEEEEEEEEEEEEecccCCccccccCceeeEEeeeeccCCCCCCCCcCcceeeecCCCCC-
Q 018004 150 TDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS- 228 (362)
Q Consensus 150 ~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GilGLg~~~~- 228 (362)
.|.|.+.|++|+ +.|.+++|+|+|++.. ++++.||++....+.+. ....++||||||++..
T Consensus 112 -------~~~~~i~Yg~Gs-~~G~~~~Dtv~ig~~~--------v~~~~Fg~a~~~~~~~~--~~~~~dGIlGLg~~~~s 173 (370)
T 3psg_A 112 -------SQELSITYGTGS-MTGILGYDTVQVGGIS--------DTNQIFGLSETEPGSFL--YYAPFDGILGLAYPSIS 173 (370)
T ss_dssp -------EEEEEEESSSCE-EEEEEEEEEEEETTEE--------EEEEEEEEECSCCCGGG--GGCSCSEEEECSCGGGC
T ss_pred -------CcEEEEEeCCce-EEEEEEEEEEeeCCcc--------cCCeEEEEEEeeccccc--ccCCccceeccCCcccc
Confidence 478999999998 5999999999999854 55899999998765322 3456899999999764
Q ss_pred -----cHHHHhhhcCCC-CCceEEeccCC-CCcceEEeCCCCC----CCceEecCcCCCCceEEEEeEEEEcCEEeeCCC
Q 018004 229 -----SMISQLASSGGV-RKMFAHCLDGI-NGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQVGLDFLNLPT 297 (362)
Q Consensus 229 -----s~~~~l~~~~~i-~~~Fs~~l~~~-~~~G~l~fGg~d~----~~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~ 297 (362)
+++++|++||+| +++||+||.+. ..+|.|+|||+|+ +++.|+|+. +..+|.|.+++|+|+++.+..
T Consensus 174 ~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~g~l~~~pv~-~~~~w~v~l~~i~v~g~~~~~-- 250 (370)
T 3psg_A 174 ASGATPVFDNLWDQGLVSQDLFSVYLSSNDDSGSVVLLGGIDSSYYTGSLNWVPVS-VEGYWQITLDSITMDGETIAC-- 250 (370)
T ss_dssp GGGCCCHHHHHHHTTCSSSSEEEEEEC-----CEEEEETCCCGGGBSSCCEEEECS-EETTEEEEECEEESSSSEEEC--
T ss_pred ccCCCCHHHHHHHCCCCCCCEEEEEEccCCCCCeEEEEEeeChHhcCCcceeeccc-ccceeEEEEeEEEECCEEEec--
Confidence 589999999999 69999999985 4589999999996 679999997 568999999999999887652
Q ss_pred cccccCCCccEEEcccccccccChHHHHHHHHHHHHhC
Q 018004 298 DVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQ 335 (362)
Q Consensus 298 ~~~~~~~~~~aiiDSGtt~~~lp~~~~~~i~~~~~~~~ 335 (362)
+.++.+||||||+++++|++++++|.+++++..
T Consensus 251 -----~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~ 283 (370)
T 3psg_A 251 -----SGGCQAIVDTGTSLLTGPTSAIANIQSDIGASE 283 (370)
T ss_dssp -----TTCEEEEECTTCCSEEEEHHHHHHHHHHTTCEE
T ss_pred -----CCCceEEEcCCCCcEECCHHHHHHHHHHhCCcc
Confidence 345779999999999999999999999998764
No 3
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=3.8e-44 Score=344.40 Aligned_cols=217 Identities=24% Similarity=0.404 Sum_probs=185.6
Q ss_pred CCCcccEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCC----CCCCCCCCCccCCcccCCCCCccceecCCCcccCCCC
Q 018004 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK----ECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVY 145 (362)
Q Consensus 70 ~~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~~c~----~C~~~~~~~~~~~~y~~~~Sst~~~v~c~~~~C~~~~ 145 (362)
++.+.+|+++|+||||+|+|+|+|||||+++||+|..|. .|.. ++.|||++|+|++..
T Consensus 57 n~~~~~Y~~~I~IGTP~Q~f~vi~DTGSs~lWV~s~~C~~~~~~C~~-------~~~y~~~~SsT~~~~----------- 118 (383)
T 2x0b_A 57 NYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVY-------HKLFDASDSSSYKHN----------- 118 (383)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTSHHHHT-------SCCBCGGGCTTCEEE-----------
T ss_pred ecCCCEEEEEEEECCCCcEEEEEEeCCCCCeEEeccCCCCCcccccC-------CCCCCCCCCCcEEEC-----------
Confidence 467889999999999999999999999999999999885 3644 479999999999983
Q ss_pred CCCCCCCCCCCCCcceeeeCCCCeEEEEEEEEEEEEecccCCccccccCceeeEEeeeeccCCCCCCCCcCcceeeecCC
Q 018004 146 GGPLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGK 225 (362)
Q Consensus 146 ~~~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GilGLg~ 225 (362)
.|.|.+.|++|+ +.|.+++|+|+|++.. ++ +.||+++...+... ....+|||||||+
T Consensus 119 -----------~~~~~i~Yg~Gs-~~G~~~~Dtv~ig~~~--------v~-~~Fg~a~~~~g~~f--~~~~~dGIlGLg~ 175 (383)
T 2x0b_A 119 -----------GTELTLRYSTGT-VSGFLSQDIITVGGIT--------VT-QMFGEVTEMPALPF--MLAEFDGVVGMGF 175 (383)
T ss_dssp -----------EEEEEEECSSCE-EEEEEEEEEEEETTEE--------EE-EEEEEEEECCHHHH--TTCSSSEEEECSC
T ss_pred -----------CcEEEEEcCCcc-EEEEEEeeEEEEcCce--------EE-EEEEEEEecCCccc--ccCCCceEeccCC
Confidence 479999999998 5999999999998743 56 99999998755211 2356899999999
Q ss_pred CCC------cHHHHhhhcCCC-CCceEEeccCC-C----CcceEEeCCCCCC----CceEecCcCCCCceEEEEeEEEEc
Q 018004 226 SNS------SMISQLASSGGV-RKMFAHCLDGI-N----GGGIFAIGHVVQP----EVNKTPLVPNQPHYSINMTAVQVG 289 (362)
Q Consensus 226 ~~~------s~~~~l~~~~~i-~~~Fs~~l~~~-~----~~G~l~fGg~d~~----~~~~~p~~~~~~~w~v~l~~i~v~ 289 (362)
+.. +++++|++||+| +++||+||.+. . .+|+|+|||+|+. ++.|+|+. ...+|.|.|++|+|+
T Consensus 176 ~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d~~~y~G~l~~~pv~-~~~~w~v~l~~i~v~ 254 (383)
T 2x0b_A 176 IEQAIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLI-KTGVWQIQMKGVSVG 254 (383)
T ss_dssp GGGCGGGCCCHHHHHHTTTCCSSSEEEEEECCSCC----CCEEEEESSCCGGGEEEEEEEEEBS-STTSCEEEECEEEES
T ss_pred CccccCCCCcHHHHHHhCCCCCCCEEEEEEcCCCCcccCCCcEEEECCcChHHcCCceEEEEcC-CCceEEEEEeEEEeC
Confidence 764 489999999999 69999999986 2 2799999999964 58999997 568999999999999
Q ss_pred CEEeeCCCcccccCCCccEEEcccccccccChHHHHHHHHHHHHhC
Q 018004 290 LDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQ 335 (362)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~aiiDSGtt~~~lp~~~~~~i~~~~~~~~ 335 (362)
++.+. ...++.+||||||+++++|++++++|.+++++..
T Consensus 255 ~~~~~-------~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~ 293 (383)
T 2x0b_A 255 SSTLL-------CEDGCLALVDTGASYISGSTSSIEKLMEALGAKK 293 (383)
T ss_dssp SCCCB-------STTCEEEEECTTCSSEEECHHHHHHHHHHHTCEE
T ss_pred CceEE-------cCCCcEEEEcCCCceEEcCHHHHHHHHHHhCCcc
Confidence 87642 2346789999999999999999999999998754
No 4
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=100.00 E-value=8.7e-44 Score=321.15 Aligned_cols=216 Identities=28% Similarity=0.418 Sum_probs=184.2
Q ss_pred CCCcccEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCC---CCCCCCCCCccCCcccCCCCCccceecCCCcccCCCCC
Q 018004 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK---ECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYG 146 (362)
Q Consensus 70 ~~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~~c~---~C~~~~~~~~~~~~y~~~~Sst~~~v~c~~~~C~~~~~ 146 (362)
++.+..|+++|.||||+|++.|+|||||+++||+|..|. .|.. ++.|||++|+|++..
T Consensus 9 n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~~C~~-------~~~y~~~~SsT~~~~------------ 69 (239)
T 1b5f_A 9 NDRDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKCINSKACRA-------HSMYESSDSSTYKEN------------ 69 (239)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSCHHHHT-------SCCBCGGGCTTCEEE------------
T ss_pred ecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEEcCCCCCCcccCC-------CCCCCCccCCCeeeC------------
Confidence 456789999999999999999999999999999999986 3543 378999999999884
Q ss_pred CCCCCCCCCCCCcceeeeCCCCeEEEEEEEEEEEEecccCCccccccCceeeEEeeeeccCC-CCCCCCcCcceeeecCC
Q 018004 147 GPLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGN-LDSTNEEALDGIIGFGK 225 (362)
Q Consensus 147 ~~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~~-~~~~~~~~~~GilGLg~ 225 (362)
.|.|.+.|++|+ +.|.+++|+|+|++.. +.++.||++....+. | ....++||||||+
T Consensus 70 ----------~~~~~i~Yg~Gs-~~G~~~~D~v~~g~~~--------v~~~~fg~~~~~~~~~f---~~~~~~GilGLg~ 127 (239)
T 1b5f_A 70 ----------GTFGAIIYGTGS-ITGFFSQDSVTIGDLV--------VKEQDFIEATDEADNVF---LHRLFDGILGLSF 127 (239)
T ss_dssp ----------EEEEEEECSSCE-EEEEEEEEEEEETTEE--------EEEEEEEEEEEECHHHH---TTCSCCEEEECSC
T ss_pred ----------CcEEEEEECCCc-EEEEEEEEEEEECCcE--------EccEEEEEEEeccCccc---cccCcceEEecCc
Confidence 368999999998 5999999999998753 558999999876432 2 1346799999999
Q ss_pred CCCc--HHHHhhhcCCC-CCceEEeccCC---CCcceEEeCCCCCC----CceEecCcCCCCceEEEEeEEEEcCEEeeC
Q 018004 226 SNSS--MISQLASSGGV-RKMFAHCLDGI---NGGGIFAIGHVVQP----EVNKTPLVPNQPHYSINMTAVQVGLDFLNL 295 (362)
Q Consensus 226 ~~~s--~~~~l~~~~~i-~~~Fs~~l~~~---~~~G~l~fGg~d~~----~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~ 295 (362)
+..+ ++++|++|++| +++||+||.+. ...|.|+|||+|+. ++.|+|+. ...+|.|.+++|+|+++.+.+
T Consensus 128 ~~~s~p~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~~~~~ 206 (239)
T 1b5f_A 128 QTISVPVWYNMLNQGLVKERRFSFWLNRNVDEEEGGELVFGGLDPNHFRGDHTYVPVT-YQYYWQFGIGDVLIGDKSTGF 206 (239)
T ss_dssp CSSSCCHHHHHHHTTCCSSSEEEEEECCSCSSSCCEEEEETSCCGGGEEEEEEEEEEE-EETTEEEEECCEEETTEECCT
T ss_pred cccccHHHHHHHHCCCCCCCEEEEEEeCCCCCCCCeEEEECCcChhhccCceEEEEcc-cCCeEEEEeeEEEECCEEecc
Confidence 8865 78899999999 69999999874 35799999999974 57899997 457999999999999988754
Q ss_pred CCcccccCCCccEEEcccccccccChHHHHHHHHHHHH
Q 018004 296 PTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIIS 333 (362)
Q Consensus 296 ~~~~~~~~~~~~aiiDSGtt~~~lp~~~~~~i~~~~~~ 333 (362)
.. ....+||||||++++||++++++|.+++++
T Consensus 207 ~~------~~~~aiiDTGTt~~~lP~~~~~~i~~~iga 238 (239)
T 1b5f_A 207 CA------PGCQAFADSGTSLLSGPTAIVTQINHAIGA 238 (239)
T ss_dssp TT------TCEEEEECTTCSSEEECHHHHHHHHHHTTC
T ss_pred cC------CCCEEEEecCcchhhCCHHHHHHHHHHhCC
Confidence 32 246799999999999999999999999875
No 5
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=6.7e-43 Score=329.48 Aligned_cols=220 Identities=25% Similarity=0.423 Sum_probs=188.2
Q ss_pred CCcccEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCCCCCCCCCCccCCcccCCCCCccceecCCCcccCCCCCCCCC
Q 018004 71 DGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLT 150 (362)
Q Consensus 71 ~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~~c~~C~~~~~~~~~~~~y~~~~Sst~~~v~c~~~~C~~~~~~~~~ 150 (362)
..+..|+++|.||||+|++.|+|||||+++||+|..|..| . ..++.|||++|+|++.
T Consensus 12 ~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~c-~-----~~~~~y~~~~SsT~~~----------------- 68 (325)
T 2apr_A 12 GNDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTNC-G-----SGQTKYDPNQSSTYQA----------------- 68 (325)
T ss_dssp TTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCSSC-C-----TTSCCBCGGGCTTCEE-----------------
T ss_pred CCCCEEEEEEEECCCCeEEEEEEcCCCCCEEEccCCCchH-h-----cCCCCCCcccCCCeee-----------------
Confidence 4678999999999999999999999999999999999888 2 3457999999999997
Q ss_pred CCCCCCCCcceeeeCCCCeEEEEEEEEEEEEecccCCccccccCceeeEEeeeeccCCCCCCCCcCcceeeecCCCCC--
Q 018004 151 DCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS-- 228 (362)
Q Consensus 151 ~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GilGLg~~~~-- 228 (362)
..|.|.+.|++|+.+.|.+++|+|+|++.. ++++.|||+...++.|. ....+||||||++..
T Consensus 69 -----~~~~~~i~Yg~Gs~~~G~~~~D~v~~g~~~--------v~~~~fg~~~~~~~~f~---~~~~~GilGLg~~~~s~ 132 (325)
T 2apr_A 69 -----DGRTWSISYGDGSSASGILAKDNVNLGGLL--------IKGQTIELAKREAASFA---SGPNDGLLGLGFDTITT 132 (325)
T ss_dssp -----EEEEEEEECTTSCEEEEEEEEEEEEETTEE--------EEEEEEEEEEEECHHHH---TSSCSEEEECSCGGGCS
T ss_pred -----CCCEEEEEECCCCCEEEEEEEEEEEECCEE--------ECcEEEEEEeccCcccc---cCCCceEEEeCCccccc
Confidence 347999999999977999999999998754 45899999998765442 234899999998753
Q ss_pred -----cHHHHhhhcCCC-CCceEEeccCC--CCcceEEeCCCCC----CCceEecCcCCCCceEEEEeEEEEcCEEeeCC
Q 018004 229 -----SMISQLASSGGV-RKMFAHCLDGI--NGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQVGLDFLNLP 296 (362)
Q Consensus 229 -----s~~~~l~~~~~i-~~~Fs~~l~~~--~~~G~l~fGg~d~----~~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~~ 296 (362)
+++++|++||+| +++||+||.+. ...|.|+|||+|+ +++.|+|+.++..+|.|.+++|+|+++ +.
T Consensus 133 ~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~vg~~-~~-- 209 (325)
T 2apr_A 133 VRGVKTPMDNLISQGLISRPIFGVYLGKAKNGGGGEYIFGGYDSTKFKGSLTTVPIDNSRGWWGITVDRATVGTS-TV-- 209 (325)
T ss_dssp STTCCCHHHHHHHTTSCSSSEEEEEECCGGGTCCEEEEETCCCGGGBCSCCEEEECBCTTSSCEEEECEEEETTE-EE--
T ss_pred ccCCCCHHHHHHhcCCCCCceEEEEecCCCCCCCCEEEEccCCchhccCceEEEEccCCCCEEEEEEeEEEECCE-ec--
Confidence 589999999999 79999999653 5689999999995 568999998667899999999999983 31
Q ss_pred CcccccCCCccEEEcccccccccChHHHHHHHHHHHHhCCCC
Q 018004 297 TDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQPDL 338 (362)
Q Consensus 297 ~~~~~~~~~~~aiiDSGtt~~~lp~~~~~~i~~~~~~~~~~~ 338 (362)
.....+||||||++++||++++++|++++.++++..
T Consensus 210 ------~~~~~~iiDSGTs~~~lP~~~~~~~~~~~~~~~~~~ 245 (325)
T 2apr_A 210 ------ASSFDGILDTGTTLLILPNNIAASVARAYGASDNGD 245 (325)
T ss_dssp ------ECCEEEEECTTCSSEEEEHHHHHHHHHHHTCEECSS
T ss_pred ------CCCceEEEecCCccEECCHHHHHHHHHHHhcccCCC
Confidence 224579999999999999999999999998876643
No 6
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=4.5e-42 Score=327.18 Aligned_cols=218 Identities=24% Similarity=0.386 Sum_probs=186.6
Q ss_pred CCCcccEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCC--CCCCCCCCCccCCcccCCCCCccceecCCCcccCCCCCC
Q 018004 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK--ECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGG 147 (362)
Q Consensus 70 ~~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~~c~--~C~~~~~~~~~~~~y~~~~Sst~~~v~c~~~~C~~~~~~ 147 (362)
++.+..|+++|.||||+|++.|+|||||+++||+|..|. .|.. ++.|||++|+|++.
T Consensus 19 n~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~-------~~~y~~~~SsT~~~-------------- 77 (351)
T 1tzs_A 19 NYLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYCTSPACKT-------HSRFQPSQSSTYSQ-------------- 77 (351)
T ss_dssp GGSSSCCCEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGTT-------SCCBCGGGCTTCBC--------------
T ss_pred ecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCccccCC-------CCcCCcccCcceEE--------------
Confidence 456789999999999999999999999999999999986 4654 37899999999987
Q ss_pred CCCCCCCCCCCcceeeeCCCCeEEEEEEEEEEEEecccCCccccccCceeeEEeeeeccCCCCCCCCcCcceeeecCCCC
Q 018004 148 PLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSN 227 (362)
Q Consensus 148 ~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GilGLg~~~ 227 (362)
..|.|.+.|++|+ +.|.+++|+|+|++.. +.++.|||+....+... ....++||||||++.
T Consensus 78 --------~~~~~~i~Yg~Gs-~~G~~~~D~v~ig~~~--------~~~~~fg~~~~~~~~~~--~~~~~~GilGLg~~~ 138 (351)
T 1tzs_A 78 --------PGQSFSIQYGTGS-LSGIIGADQVSVEGLT--------VVGQQFGESVTEPGQTF--VDAEFDGILGLGYPS 138 (351)
T ss_dssp --------CSCEEEEESSSCE-EEEEEEEEEEEETTEE--------EEEEEEEEECSCCCGGG--GGCSCSEEEECSCGG
T ss_pred --------CCCEEEEEeCCCC-eEEEEEEeEEEECCeE--------ECCeEEEEEEecccccc--ccCCCceEEecCCcc
Confidence 4579999999998 5999999999998753 45899999987655321 235689999999976
Q ss_pred C------cHHHHhhhcCCC-CCceEEeccCCC---CcceEEeCCCCC----CCceEecCcCCCCceEEEEeEEEEcCEEe
Q 018004 228 S------SMISQLASSGGV-RKMFAHCLDGIN---GGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQVGLDFL 293 (362)
Q Consensus 228 ~------s~~~~l~~~~~i-~~~Fs~~l~~~~---~~G~l~fGg~d~----~~~~~~p~~~~~~~w~v~l~~i~v~~~~~ 293 (362)
. +++++|++||+| +++||+||.+.. ..|.|+|||+|+ +++.|+|+. ...+|.|.+++|+|+++.+
T Consensus 139 ~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~~~ 217 (351)
T 1tzs_A 139 LAVGGVTPVFDNMMAQNLVDLPMFSVYMSSNPEGGAGSELIFGGYDHSHFSGSLNWVPVT-KQAYWQIALDNIQVGGTVM 217 (351)
T ss_dssp GSGGGCCCHHHHHHHTTCCSSSEEEEECCCCC--CTTCEEEETSCCGGGBCSCCEEEECS-EETTEEEEEEEEEETTEEE
T ss_pred ccccCCCcHHHHHHHCCCCCCCEEEEEEcCCCCCCCCCEEEECCCCHHHcCCceEEEecC-CCceEEEEeCEEEECCceE
Confidence 4 489999999999 699999999862 279999999995 568999997 4589999999999999875
Q ss_pred eCCCcccccCCCccEEEcccccccccChHHHHHHHHHHHHhC
Q 018004 294 NLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQ 335 (362)
Q Consensus 294 ~~~~~~~~~~~~~~aiiDSGtt~~~lp~~~~~~i~~~~~~~~ 335 (362)
.. .....+||||||+++++|++++++|.+++++..
T Consensus 218 ~~-------~~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~ 252 (351)
T 1tzs_A 218 FC-------SEGCQAIVDTGTSLITGPSDKIKQLQNAIGAAP 252 (351)
T ss_dssp EC-------TTCEEEEECTTCSSEEECHHHHHHHHHHHTCEE
T ss_pred Ec-------CCCceEEeccCCcceeCCHHHHHHHHHHhCCcc
Confidence 31 235679999999999999999999999997764
No 7
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=1.4e-41 Score=329.59 Aligned_cols=260 Identities=23% Similarity=0.364 Sum_probs=200.1
Q ss_pred CCcccEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCCCCCCCCCCccCCcccCCCCCccceecCCCcccCCCCCC---
Q 018004 71 DGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGG--- 147 (362)
Q Consensus 71 ~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~~c~~C~~~~~~~~~~~~y~~~~Sst~~~v~c~~~~C~~~~~~--- 147 (362)
+.+++|+++|.||||+|++.|+|||||+++||+|..| .+|+|++.+.|.++.|......
T Consensus 18 ~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~~------------------~~Sst~~~~~C~s~~C~~~~~~~c~ 79 (403)
T 3aup_A 18 GSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQ------------------YSSKTYQAPFCHSTQCSRANTHQCL 79 (403)
T ss_dssp TTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSC------------------CCCSSCBCCCTTBHHHHHTTCCCEE
T ss_pred CCCceEEEEEECCCCCceeEEEEECCCCceeECCCCC------------------CCCCCCCccCCCCccccCccccCcc
Confidence 3578999999999999999999999999999998653 3689999999999999876533
Q ss_pred -----CCCCCCCCCCCcceeeeC-CCCeEEEEEEEEEEEEecccCCcc---ccccCceeeEEeeeeccCC-CCCCCCcCc
Q 018004 148 -----PLTDCTANTSCPYLEIYG-DGSSTTGYFVQDVVQYDKVSGDLQ---TTSTNGSLIFGCGARQSGN-LDSTNEEAL 217 (362)
Q Consensus 148 -----~~~~c~~~~~~~~~~~Y~-~g~~~~G~~~~D~v~i~~~~~~~~---~~~~~~~~~fg~~~~~~~~-~~~~~~~~~ 217 (362)
....|. ++.|.|.+.|+ +|+.+.|.+++|+|+|++..+.++ ....++++.|||+...... + ....+
T Consensus 80 ~c~~~~~s~~~-~~~~~~~~~Y~~d~~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~~~~Fg~~~~~~~~~~---~~~~~ 155 (403)
T 3aup_A 80 SCPAASRPGCH-KNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQKG---LPRNT 155 (403)
T ss_dssp ECSSSCBTTBC-SSEEEEEEEETTTTEEEEEEEEEEEEEEEECCC----CCCEEEEEEEEEEEECGGGGSSS---SSTTC
T ss_pred ccCCCCCCCCC-CCcceeEeecCCCCceeeEEEEEEEEEecccCCccccccccccccCEEEECCcccccccC---CCCCC
Confidence 123454 35799999998 787789999999999998433210 0124678999999986433 2 23568
Q ss_pred ceeeecCCCCCcHHHHhhhcCCCCCceEEeccCC-CCcceEEeCCCCC-------C-----CceEecCcCC-CCceEEEE
Q 018004 218 DGIIGFGKSNSSMISQLASSGGVRKMFAHCLDGI-NGGGIFAIGHVVQ-------P-----EVNKTPLVPN-QPHYSINM 283 (362)
Q Consensus 218 ~GilGLg~~~~s~~~~l~~~~~i~~~Fs~~l~~~-~~~G~l~fGg~d~-------~-----~~~~~p~~~~-~~~w~v~l 283 (362)
+||||||++..+++.||.+..+.+++||+||.+. ...|.|+||| |+ + ++.|+|++.+ ..+|.|.|
T Consensus 156 dGIlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~~~~~G~l~fGg-d~~~~~~~~G~~~~~~l~~~Pl~~~~~~~y~v~l 234 (403)
T 3aup_A 156 QGVAGLGHAPISLPNQLASHFGLQRQFTTCLSRYPTSKGAIIFGD-APNNMRQFQNQDIFHDLAFTPLTITLQGEYNVRV 234 (403)
T ss_dssp CEEEECSSSTTSHHHHHHHHHTCCSEEEEECCSCTTSCEEEEESC-HHHHC--CTTCCTTTTEEEEECEECTTSCEEECE
T ss_pred ceEEECCCCCcCHHHHHHhhcCCCCeEEEEcCCCCCCCeeEEECC-CchhccccccccccCceeecccccCCCCcceEEE
Confidence 9999999999999999976554479999999885 5689999999 63 3 7899999865 36999999
Q ss_pred eEEEEcCEEe-eCCCccccc--CCCccEEEcccccccccChHHHHHHHHHHHHhCCCCcc-cccCCcCceeecc
Q 018004 284 TAVQVGLDFL-NLPTDVFGV--GDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQPDLKV-HTVHDEYTCFQYS 353 (362)
Q Consensus 284 ~~i~v~~~~~-~~~~~~~~~--~~~~~aiiDSGtt~~~lp~~~~~~i~~~~~~~~~~~~~-~~~~~~~~C~~~~ 353 (362)
++|+|+++.+ .++...+.. .+...+||||||++++||++++++|+++|.+++..... .....+++||+-+
T Consensus 235 ~~i~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~c~~c~ 308 (403)
T 3aup_A 235 NSIRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPKQAQVKSVAPFGLCFNSN 308 (403)
T ss_dssp EEEEETTEEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHTSCGGGEECCCTTCSCEECGG
T ss_pred EEEEECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHhccccccCCCCCCCceEECC
Confidence 9999999988 655544421 23456999999999999999999999999887754322 1223456899865
No 8
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=2.5e-42 Score=324.87 Aligned_cols=220 Identities=24% Similarity=0.385 Sum_probs=186.7
Q ss_pred CCCcccEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCCCCCCCCCCccCCcccCCCCCccceecCCCcccCCCCCCCC
Q 018004 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPL 149 (362)
Q Consensus 70 ~~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~~c~~C~~~~~~~~~~~~y~~~~Sst~~~v~c~~~~C~~~~~~~~ 149 (362)
++.+.+|+++|+||||+|+++|+|||||+++||+|..|..| .|..++.|||++|+|++..
T Consensus 7 n~~d~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~C~~~-----~C~~~~~y~~~~SsT~~~~--------------- 66 (320)
T 4aa9_A 7 SYLDSQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSIYCKSN-----VCKNHHRFDPRKSSTFRNL--------------- 66 (320)
T ss_dssp -CCCCCCEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSH-----HHHTSCCBCGGGCTTCEEE---------------
T ss_pred eccCCEEEEEEEECCCCeEEEEEEeCCCCceEEcCCCCCcc-----ccCCCCCCCCCCCcCeEcC---------------
Confidence 56788999999999999999999999999999999998732 1223479999999999984
Q ss_pred CCCCCCCCCcceeeeCCCCeEEEEEEEEEEEEecccCCccccccCceeeEEeeeeccCCCCCCCCcCcceeeecCCCC--
Q 018004 150 TDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSN-- 227 (362)
Q Consensus 150 ~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GilGLg~~~-- 227 (362)
.|.|.+.|++|+ +.|.+++|+|+|++.. ++++.|||+....+... .....+||||||++.
T Consensus 67 -------~~~~~i~Yg~gs-~~G~~~~D~v~ig~~~--------v~~~~fg~~~~~~~~~~--~~~~~~GilGLg~~~~s 128 (320)
T 4aa9_A 67 -------GKPLSIHYGTGS-MEGFLGYDTVTVSNIV--------DPNQTVGLSTEQPGEVF--TYSEFDGILGLAYPSLA 128 (320)
T ss_dssp -------EEEEEEEETTEE-EEEEEEEEEEEETTEE--------EEEEEEEEEEECCSHHH--HSCCCSEEEECSCGGGS
T ss_pred -------CcEEEEEECCcE-EEEEEEEEEEEECCEe--------ecCeEEEEEEEcccccc--cccCcccEEecCccccc
Confidence 478999999998 5999999999999854 55899999998765211 234579999999864
Q ss_pred ----CcHHHHhhhcCCC-CCceEEeccCCCCcceEEeCCCCCC----CceEecCcCCCCceEEEEeEEEEcCEEeeCCCc
Q 018004 228 ----SSMISQLASSGGV-RKMFAHCLDGINGGGIFAIGHVVQP----EVNKTPLVPNQPHYSINMTAVQVGLDFLNLPTD 298 (362)
Q Consensus 228 ----~s~~~~l~~~~~i-~~~Fs~~l~~~~~~G~l~fGg~d~~----~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~~ 298 (362)
.+++++|++||+| +++||+||.+....|.|+|||+|+. ++.|+|+. +..+|.|.+++|+|+++.+..+
T Consensus 129 ~~~~~~~~~~l~~~g~i~~~~Fs~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~w~v~l~~i~v~~~~~~~~-- 205 (320)
T 4aa9_A 129 SEYSVPVFDNMMDRHLVARDLFSVYMDRNGQGSMLTLGAIDPSYYTGSLHWVPVT-LQQYWQFTVDSVTINGVAVACV-- 205 (320)
T ss_dssp CTTCCCHHHHHHHTTCSSSSEEEEECCSSSSCCEEEETCCCGGGEEEEEEEEECS-SBTTBEEEECEEEETTEEEEST--
T ss_pred ccCCCCHHHHHHhCCCCCCceEEEEeCCCCCCeEEEEcccCHHHccCceEEEEcc-cCCceEEEEeEEEECCEEeccC--
Confidence 3589999999999 7999999998656899999999974 58899996 5689999999999999887532
Q ss_pred ccccCCCccEEEcccccccccChHHHHHHHHHHHHhC
Q 018004 299 VFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQ 335 (362)
Q Consensus 299 ~~~~~~~~~aiiDSGtt~~~lp~~~~~~i~~~~~~~~ 335 (362)
....++|||||++++||++++++|.+++++..
T Consensus 206 -----~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~ 237 (320)
T 4aa9_A 206 -----GGCQAILDTGTSVLFGPSSDILKIQMAIGATE 237 (320)
T ss_dssp -----TCEEEEECTTCSSEEEEHHHHHHHHHHTTCEE
T ss_pred -----CCcEEEEECCCCcEECCHHHHHHHHHHhCCcc
Confidence 34579999999999999999999999997664
No 9
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=3.1e-42 Score=324.70 Aligned_cols=217 Identities=23% Similarity=0.366 Sum_probs=184.9
Q ss_pred CCCcccEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCC--CCCCCCCCCccCCcccCCCCCccceecCCCcccCCCCCC
Q 018004 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK--ECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGG 147 (362)
Q Consensus 70 ~~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~~c~--~C~~~~~~~~~~~~y~~~~Sst~~~v~c~~~~C~~~~~~ 147 (362)
++.+..|+++|.||||+|++.|+|||||+++||+|..|. .|.. ++.|||++|+|++..
T Consensus 10 n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C~~-------~~~y~~~~SsT~~~~------------- 69 (323)
T 3cms_A 10 NYLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCKSNACKN-------HQRFDPRKSSTFQNL------------- 69 (323)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHT-------SCCBCGGGCTTCEEE-------------
T ss_pred eccCCEEEEEEEECCCCeEEEEEEeCCccceEEcCCCCCcccccC-------CCCCCCccCCCeEEC-------------
Confidence 456789999999999999999999999999999999884 4653 378999999999984
Q ss_pred CCCCCCCCCCCcceeeeCCCCeEEEEEEEEEEEEecccCCccccccCceeeEEeeeeccCCCCCCCCcCcceeeecCCCC
Q 018004 148 PLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSN 227 (362)
Q Consensus 148 ~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GilGLg~~~ 227 (362)
.|.|.+.|++|+ +.|.+++|+|+|++.. ++++.|||+....+... .....+||||||++.
T Consensus 70 ---------~~~~~i~Yg~Gs-~~G~~~~D~v~ig~~~--------~~~~~fg~~~~~~~~~~--~~~~~~GilGLg~~~ 129 (323)
T 3cms_A 70 ---------GKPLSIHYGTGS-MQGILGYDTVTVSNIV--------DIQQTVGLSTQEPGDFF--TYAEFDGILGMAYPS 129 (323)
T ss_dssp ---------EEEEEEEETTEE-EEEEEEEEEEEETTEE--------EEEEEEEEEEECCSHHH--HHSSCSEEEECSCGG
T ss_pred ---------CcEEEEEeCCCC-eEEEEEEEEEEECCeE--------EeccEEEEEEecccccc--cccCCceEEecCcch
Confidence 478999999998 5999999999998753 55899999998654211 124579999999875
Q ss_pred C------cHHHHhhhcCCC-CCceEEeccCCCCcceEEeCCCCCC----CceEecCcCCCCceEEEEeEEEEcCEEeeCC
Q 018004 228 S------SMISQLASSGGV-RKMFAHCLDGINGGGIFAIGHVVQP----EVNKTPLVPNQPHYSINMTAVQVGLDFLNLP 296 (362)
Q Consensus 228 ~------s~~~~l~~~~~i-~~~Fs~~l~~~~~~G~l~fGg~d~~----~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~~ 296 (362)
. +++++|++|++| +++||+||.+....|.|+|||+|+. ++.|+|+. ...+|.|.+++|+|+++.+..+
T Consensus 130 ~s~~~~~~~~~~l~~q~~i~~~~FS~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~~~~~~ 208 (323)
T 3cms_A 130 LASEYSIPVFDNMMNRHLVAQDLFSVYMDRNGQESMLTLGAIDPSYYTGSLHWVPVT-VQQYWQFTVDSVTISGVVVACE 208 (323)
T ss_dssp GSCTTCCCHHHHHHHTTCSSSSEEEEECCTTSSCEEEEESCCCGGGEEEEEEEEECS-SBTTBEEEEEEEEETTEEEEST
T ss_pred hhccCCCCHHHHHHHCCCCCCCEEEEEECCCCCCEEEEECCCChhhccCceEEEECc-cCCeEEEEEeeEEECCEEeecC
Confidence 3 589999999999 7999999998644599999999974 58999997 4689999999999999877532
Q ss_pred CcccccCCCccEEEcccccccccChHHHHHHHHHHHHh
Q 018004 297 TDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQ 334 (362)
Q Consensus 297 ~~~~~~~~~~~aiiDSGtt~~~lp~~~~~~i~~~~~~~ 334 (362)
....+||||||+++++|++++++|.+++++.
T Consensus 209 -------~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~ 239 (323)
T 3cms_A 209 -------GGCQAILDTGTSKLVGPSSDILNIQQAIGAT 239 (323)
T ss_dssp -------TCEEEEECTTCCSEEECHHHHHHHHHHHTCE
T ss_pred -------CCcEEEEecCCccEeCCHHHHHHHHHHhCCe
Confidence 3467999999999999999999999999765
No 10
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=1.4e-41 Score=324.91 Aligned_cols=219 Identities=24% Similarity=0.381 Sum_probs=187.3
Q ss_pred CCCcccEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCC---CCCCCCCCCccCCcccCCCCCccceecCCCcccCCCCC
Q 018004 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK---ECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYG 146 (362)
Q Consensus 70 ~~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~~c~---~C~~~~~~~~~~~~y~~~~Sst~~~v~c~~~~C~~~~~ 146 (362)
++.+..|+++|.||||+|++.|+|||||+++||+|..|. .|..+ +.|||++|+|++..
T Consensus 14 ~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~C~~~-------~~y~~~~SsT~~~~------------ 74 (361)
T 1mpp_A 14 DFDLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHKGCDNSEGCVGK-------RFFDPSSSSTFKET------------ 74 (361)
T ss_dssp ETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCGGGTCCSS-------CCBCGGGCTTCEEE------------
T ss_pred cCCCCEEEEEEEECCCCcEEEEEEcCCCCCeEECCCCCCCCccCCCC-------CcCCCccCCceEec------------
Confidence 456789999999999999999999999999999999997 67643 78999999999984
Q ss_pred CCCCCCCCCCCCcceeeeCCCCeEEEEEEEEEEEEecccCCccccccCceeeEEeeeeccC-----CCCCCCCcCcceee
Q 018004 147 GPLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSG-----NLDSTNEEALDGII 221 (362)
Q Consensus 147 ~~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~-----~~~~~~~~~~~Gil 221 (362)
.|.|.+.|++|+ +.|.+++|+|+|++.. ++++.|||+....+ .+. .....+|||
T Consensus 75 ----------~~~~~i~Yg~Gs-~~G~~~~D~v~~g~~~--------v~~~~fg~~~~~~~~~~~~~~~--~~~~~~Gil 133 (361)
T 1mpp_A 75 ----------DYNLNITYGTGG-ANGIYFRDSITVGGAT--------VKQQTLAYVDNVSGPTAEQSPD--SELFLDGIF 133 (361)
T ss_dssp ----------EEEEEEECSSCE-EEEEEEEEEEEETTEE--------EEEEEEEEEEEEESGGGSSCTT--CSSCCCEEE
T ss_pred ----------CCeEEEEECCce-EEEEEEEEEEEECCEE--------EeceEEEEEEeccCcccccccc--ccCCCCCEE
Confidence 478999999998 5999999999998753 55899999998765 221 245689999
Q ss_pred ecCCCC------------CcHHHHhhhcCCC-CCceEEeccCCCCcceEEeCCCCC----CCceEecCcCCCC---ceEE
Q 018004 222 GFGKSN------------SSMISQLASSGGV-RKMFAHCLDGINGGGIFAIGHVVQ----PEVNKTPLVPNQP---HYSI 281 (362)
Q Consensus 222 GLg~~~------------~s~~~~l~~~~~i-~~~Fs~~l~~~~~~G~l~fGg~d~----~~~~~~p~~~~~~---~w~v 281 (362)
|||++. .+++++|++||+| +++||+||.+....|.|+|||+|+ +++.|+|+..... +|.|
T Consensus 134 GLg~~~~s~~~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~~~v 213 (361)
T 1mpp_A 134 GAAYPDNTAMEAEYGDTYNTVHVNLYKQGLISSPVFSVYMNTNDGGGQVVFGGVNNTLLGGDIQYTDVLKSRGGYFFWDA 213 (361)
T ss_dssp ECSCGGGSHHHHHHSCCCCCHHHHHHHTTSSSSSEEEEECCCSSSEEEEEESSCCGGGBSSCCEEEECEEETTEEEEEEE
T ss_pred EeCCcccccccccccccCCCHHHHHHHcCCCCCcEEEEEecCCCCCcEEEEecCChhhcCCceEEEEcccCCCceeEEEE
Confidence 999864 4578899999999 699999999854589999999995 5689999986544 8999
Q ss_pred EEeEEEEcCEEeeCCCcccccCCCccEE-EcccccccccChHHHHHHHHHHHHhC
Q 018004 282 NMTAVQVGLDFLNLPTDVFGVGDNKGTI-IDSGTTLAYLPEMVYEPLVSKIISQQ 335 (362)
Q Consensus 282 ~l~~i~v~~~~~~~~~~~~~~~~~~~ai-iDSGtt~~~lp~~~~~~i~~~~~~~~ 335 (362)
.|++|+|+++.+... ....+| |||||++++||++++++|++++++++
T Consensus 214 ~l~~i~v~~~~~~~~-------~~~~ai~iDSGTt~~~lP~~~~~~l~~~~~~~~ 261 (361)
T 1mpp_A 214 PVTGVKIDGSDAVSF-------DGAQAFTIDTGTNFFIAPSSFAEKVVKAALPDA 261 (361)
T ss_dssp EEEEEEETTEEEEEE-------EEEEEEEEETTCCSEEEEHHHHHHHHHHHCTTC
T ss_pred EEeEEEECCeeeccC-------CCCEEEEECCCCCceeCCHHHHHHHHHHhCCcc
Confidence 999999999876421 235699 99999999999999999999998764
No 11
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=5.6e-42 Score=323.09 Aligned_cols=216 Identities=23% Similarity=0.389 Sum_probs=185.9
Q ss_pred CCCcccEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCC--CCCCCCCCCccCCcccCCCCCccceecCCCcccCCCCCC
Q 018004 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK--ECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGG 147 (362)
Q Consensus 70 ~~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~~c~--~C~~~~~~~~~~~~y~~~~Sst~~~v~c~~~~C~~~~~~ 147 (362)
++.+..|+++|.||||+|++.|+|||||+++||+|..|. .|.. ++.|||++|+|++..
T Consensus 8 n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C~~-------~~~y~~~~SsT~~~~------------- 67 (324)
T 1am5_A 8 NEADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSSHCSAQACSN-------HNKFKPRQSSTYVET------------- 67 (324)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEECBTTCCSHHHHT-------SCCBCGGGCTTCEEE-------------
T ss_pred cCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCcccccC-------CCcCCCccCCCeEeC-------------
Confidence 456789999999999999999999999999999999886 3543 378999999999984
Q ss_pred CCCCCCCCCCCcceeeeCCCCeEEEEEEEEEEEEecccCCccccccCceeeEEeeeeccCCCCCCCCcCcceeeecCCCC
Q 018004 148 PLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSN 227 (362)
Q Consensus 148 ~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GilGLg~~~ 227 (362)
.|.|.+.|++|+. .|.+++|+|+|++.. ++++.|||+....+.+. .....+||||||++.
T Consensus 68 ---------~~~~~i~Yg~Gs~-~G~~~~D~v~~g~~~--------~~~~~fg~~~~~~~~~~--~~~~~~GilGLg~~~ 127 (324)
T 1am5_A 68 ---------GKTVDLTYGTGGM-RGILGQDTVSVGGGS--------DPNQELGESQTEPGPFQ--AAAPFDGILGLAYPS 127 (324)
T ss_dssp ---------EEEEEEECSSCEE-EEEEEEEEEESSSSC--------EEEEEEEEEEECCSTTT--TTCSSSEEEECSCGG
T ss_pred ---------CcEEEEEECCCCe-EEEEEECceeECCcE--------EcccEEEEEEecccccc--cCCCCceEEecCCcc
Confidence 4789999999986 999999999998753 55899999998765422 245689999999975
Q ss_pred C------cHHHHhhhcCCC-CCceEEeccCC-CCcceEEeCCCCC----CCceEecCcCCCCceEEEEeEEEEcCEEeeC
Q 018004 228 S------SMISQLASSGGV-RKMFAHCLDGI-NGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQVGLDFLNL 295 (362)
Q Consensus 228 ~------s~~~~l~~~~~i-~~~Fs~~l~~~-~~~G~l~fGg~d~----~~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~ 295 (362)
. +++++|++||+| +++||+||.+. ...|.|+|||+|+ +++.|+|+. ...+|.|.+++|+|+++.+..
T Consensus 128 ~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~~~~~ 206 (324)
T 1am5_A 128 IAAAGAVPVFDNMGSQSLVEKDLFSFYLSGGGANGSEVMLGGVDNSHYTGSIHWIPVT-AEKYWQVALDGITVNGQTAAC 206 (324)
T ss_dssp GCGGGCCCHHHHHHHTTCSSSSEEEEECCSTTCSCEEEEESSCCGGGBCSCCEEEEEE-EETTEEEEECEEEETTEECCC
T ss_pred ccccCCCchHHhHHhcCCCCCCEEEEEecCCCCCCcEEEECccCHHHcCCceEEEecC-CCcEEEEEEeEEEECCceeec
Confidence 4 589999999999 79999999986 3589999999995 568999997 468999999999999987531
Q ss_pred CCcccccCCCccEEEcccccccccChHHHHHHHHHHHHh
Q 018004 296 PTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQ 334 (362)
Q Consensus 296 ~~~~~~~~~~~~aiiDSGtt~~~lp~~~~~~i~~~~~~~ 334 (362)
++ ..+||||||++++||++++++|.++++++
T Consensus 207 -------~~-~~aiiDSGTt~~~lp~~~~~~l~~~~~~~ 237 (324)
T 1am5_A 207 -------EG-CQAIVDTGTSKIVAPVSALANIMKDIGAS 237 (324)
T ss_dssp -------CC-EEEEECTTCSSEEECTTTHHHHHHHHTCE
T ss_pred -------cC-ceEEEecCCccEECCHHHHHHHHHHhCCc
Confidence 12 67999999999999999999999999876
No 12
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=1.7e-41 Score=320.46 Aligned_cols=218 Identities=24% Similarity=0.439 Sum_probs=185.9
Q ss_pred CCcccEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCC--CCCCCCCCccCCcccCCCCCccceecCCCcccCCCCCCC
Q 018004 71 DGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKE--CPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGP 148 (362)
Q Consensus 71 ~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~~c~~--C~~~~~~~~~~~~y~~~~Sst~~~v~c~~~~C~~~~~~~ 148 (362)
+.+..|+++|.||||+|++.|+|||||+++||+|..|.. |.. ++.|||++|+|++..
T Consensus 9 ~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C~~-------~~~y~~~~SsT~~~~-------------- 67 (329)
T 1htr_B 9 YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQSQACTS-------HSRFNPSESSTYSTN-------------- 67 (329)
T ss_dssp GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHT-------SCCBCGGGCTTCEEE--------------
T ss_pred EcCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCCcccCC-------CCcCCCccCCCeEEC--------------
Confidence 467899999999999999999999999999999999863 644 378999999999984
Q ss_pred CCCCCCCCCCcceeeeCCCCeEEEEEEEEEEEEecccCCccccccCceeeEEeeeeccCCCCCCCCcCcceeeecCCCCC
Q 018004 149 LTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS 228 (362)
Q Consensus 149 ~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GilGLg~~~~ 228 (362)
.|.|.+.|++|+. .|.+++|+|+|++.. ++++.|||+....+.+. .....+||||||++..
T Consensus 68 --------~~~~~i~Yg~gs~-~G~~~~D~v~~g~~~--------~~~~~fg~~~~~~~~~~--~~~~~~GilGLg~~~~ 128 (329)
T 1htr_B 68 --------GQTFSLQYGSGSL-TGFFGYDTLTVQSIQ--------VPNQEFGLSENEPGTNF--VYAQFDGIMGLAYPAL 128 (329)
T ss_dssp --------EEEEEEEETTEEE-EEEEEEEEEEETTEE--------EEEEEEEEESSCSSGGG--GGCSCCEEEECCCCSC
T ss_pred --------CcEEEEEeCCCCe-EEEEEeeeEEEcceE--------ECceEEEEEEEcccccc--ccCCCceEEecCCCcc
Confidence 4789999999986 999999999998753 55899999998755321 2356899999999764
Q ss_pred ------cHHHHhhhcCCC-CCceEEeccCCC-C-cceEEeCCCCCC----CceEecCcCCCCceEEEEeEEEEcCEEeeC
Q 018004 229 ------SMISQLASSGGV-RKMFAHCLDGIN-G-GGIFAIGHVVQP----EVNKTPLVPNQPHYSINMTAVQVGLDFLNL 295 (362)
Q Consensus 229 ------s~~~~l~~~~~i-~~~Fs~~l~~~~-~-~G~l~fGg~d~~----~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~ 295 (362)
+++++|++||+| +++||+||.+.. . .|.|+|||+|+. ++.|+|+. ...+|.|.+++|+|+++.+..
T Consensus 129 s~~~~~~~~~~l~~qg~i~~~~Fs~~L~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~~~~~ 207 (329)
T 1htr_B 129 SVDEATTAMQGMVQEGALTSPVFSVYLSNQQGSSGGAVVFGGVDSSLYTGQIYWAPVT-QELYWQIGIEEFLIGGQASGW 207 (329)
T ss_dssp CCTTCCSHHHHHHHTTCSSSSEEEEEECSSCSSEEEEEEESSCCGGGEEEEEEEEEBC-SSSSCEEEECEEEETTEECCT
T ss_pred cccCCCCHHHHHHhcCCCCCCEEEEEEcCCCCCCCcEEEEcccCHHHcCCceEEEECC-CCceEEEEEeEEEECCceeee
Confidence 589999999999 799999999863 2 799999999964 58999997 468999999999999987531
Q ss_pred CCcccccCCCccEEEcccccccccChHHHHHHHHHHHHhC
Q 018004 296 PTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQ 335 (362)
Q Consensus 296 ~~~~~~~~~~~~aiiDSGtt~~~lp~~~~~~i~~~~~~~~ 335 (362)
......+||||||++++||++++++|.+++++..
T Consensus 208 ------~~~~~~aiiDSGTt~~~lp~~~~~~l~~~~~~~~ 241 (329)
T 1htr_B 208 ------CSEGCQAIVDTGTSLLTVPQQYMSALLQATGAQE 241 (329)
T ss_dssp ------TTTCEEEEECTTCCSEEEEGGGHHHHHHHHTCEE
T ss_pred ------cCCCceEEEecCCccEECCHHHHHHHHHHhCCee
Confidence 1235679999999999999999999999997764
No 13
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=2e-41 Score=334.01 Aligned_cols=221 Identities=28% Similarity=0.373 Sum_probs=184.4
Q ss_pred CCCcccEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCCCCCCCCCCccCCcccCCCCCccceecCCCcccCCCCCCCC
Q 018004 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPL 149 (362)
Q Consensus 70 ~~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~~c~~C~~~~~~~~~~~~y~~~~Sst~~~v~c~~~~C~~~~~~~~ 149 (362)
++.+..|+++|.||||+|+|.|+|||||+++||+|..|.. ...|..++.|||++|+|++.
T Consensus 48 n~~~~~Y~~~i~IGTP~Q~~~v~~DTGSs~lWV~~~~C~~----~~~C~~~~~y~~~~SsT~~~---------------- 107 (478)
T 1qdm_A 48 NYMNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYF----SIACYLHSRYKAGASSTYKK---------------- 107 (478)
T ss_dssp CGGGCCEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCS----CGGGGGSCCBCGGGCTTCBC----------------
T ss_pred eccCCEEEEEEEECCCCeEEEEEEcCCCcceEEecCCCCC----CccccCCCCCCcccCCCeee----------------
Confidence 4567899999999999999999999999999999998851 11233447999999999987
Q ss_pred CCCCCCCCCcceeeeCCCCeEEEEEEEEEEEEecccCCccccccCceeeEEeeeeccCCCCCCCCcCcceeeecCCCCCc
Q 018004 150 TDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNSS 229 (362)
Q Consensus 150 ~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GilGLg~~~~s 229 (362)
..+.|.+.|++|+ +.|.+++|+|+|++.. ++++.||+++...+... ....++||||||++..+
T Consensus 108 ------~~~~~~i~Yg~Gs-~~G~~~~Dtv~ig~~~--------v~~~~Fg~a~~~~~~~f--~~~~~dGIlGLg~~~~s 170 (478)
T 1qdm_A 108 ------NGKPAAIQYGTGS-IAGYFSEDSVTVGDLV--------VKDQEFIEATKEPGITF--LVAKFDGILGLGFKEIS 170 (478)
T ss_dssp ------CCCEEEEEETTEE-EEEEEEEEEEEETTEE--------EEEEEEEEEEECCBSHH--HHCSSSEEEECSCGGGC
T ss_pred ------CCcEEEEEcCCCC-eEEEEEEEEEEECCeE--------ECCEEEEEEEecCCccc--ccccccceecccccccc
Confidence 3578999999998 5999999999998754 55899999987654311 13457999999997654
Q ss_pred ------HHHHhhhcCCC-CCceEEeccCC---CCcceEEeCCCCCC----CceEecCcCCCCceEEEEeEEEEcCEEeeC
Q 018004 230 ------MISQLASSGGV-RKMFAHCLDGI---NGGGIFAIGHVVQP----EVNKTPLVPNQPHYSINMTAVQVGLDFLNL 295 (362)
Q Consensus 230 ------~~~~l~~~~~i-~~~Fs~~l~~~---~~~G~l~fGg~d~~----~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~ 295 (362)
++++|++||+| +++||+||.+. ..+|.|+|||+|+. ++.|+|+. ...+|.|.+++|+|+++.+.+
T Consensus 171 ~~~~~p~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~G~l~~~pv~-~~~~w~v~l~~i~v~g~~~~~ 249 (478)
T 1qdm_A 171 VGKAVPVWYKMIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGEHTYVPVT-QKGYWQFDMGDVLVGGKSTGF 249 (478)
T ss_dssp GGGCCCHHHHHTTTTCCSSSEEEEECCCC-----CEEEEETCCCTTSEEEEEEEEEEE-EETTEEEEECCEEETTEECST
T ss_pred cCCCCcHHHHHHHCCCCCCCEEEEEeecCCCCCCCeEEEeCCcCHhhcCCCceEEecc-CCCeEEEEEeEEEECCEEEee
Confidence 68999999999 69999999885 34799999999975 47899996 568999999999999987654
Q ss_pred CCcccccCCCccEEEcccccccccChHHHHHHHHHHHHh
Q 018004 296 PTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQ 334 (362)
Q Consensus 296 ~~~~~~~~~~~~aiiDSGtt~~~lp~~~~~~i~~~~~~~ 334 (362)
.. .+..+||||||+++++|++++++|.++|++.
T Consensus 250 ~~------~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~ 282 (478)
T 1qdm_A 250 CA------GGCAAIADSGTSLLAGPTAIITEINEKIGAA 282 (478)
T ss_dssp TT------TCEEEEECSSCCSEEECHHHHHHHHHHHTCC
T ss_pred cC------CCceEEEcCCCCceeCCHHHHHHHHHHhCcc
Confidence 32 3567999999999999999999999999764
No 14
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=1e-41 Score=321.96 Aligned_cols=215 Identities=26% Similarity=0.462 Sum_probs=183.9
Q ss_pred CCCcccEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCC--CCCCCCCCccCCcccCCCCCccceecCCCcccCCCCCC
Q 018004 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKE--CPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGG 147 (362)
Q Consensus 70 ~~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~~c~~--C~~~~~~~~~~~~y~~~~Sst~~~v~c~~~~C~~~~~~ 147 (362)
++.+..|+++|.||||+|++.|+|||||+++||+|..|.. |.. ++.|||++|+|++.
T Consensus 9 ~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C~~-------~~~y~~~~SsT~~~-------------- 67 (329)
T 1dpj_A 9 NYLNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNECGSLACFL-------HSKYDHEASSSYKA-------------- 67 (329)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHT-------SCCBCGGGCTTCEE--------------
T ss_pred ecCCCEEEEEEEECCCCcEEEEEEeCCCcCeEEecCCCCCcccCC-------cCcCCcccCcCeEE--------------
Confidence 4567899999999999999999999999999999999976 544 37899999999987
Q ss_pred CCCCCCCCCCCcceeeeCCCCeEEEEEEEEEEEEecccCCccccccCceeeEEeeeeccC-CCCCCCCcCcceeeecCCC
Q 018004 148 PLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSG-NLDSTNEEALDGIIGFGKS 226 (362)
Q Consensus 148 ~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~-~~~~~~~~~~~GilGLg~~ 226 (362)
..|.|.+.|++|+ +.|.+++|+|+|++.. ++++.|||++...+ .| .....+||||||++
T Consensus 68 --------~~~~~~i~Yg~Gs-~~G~~~~D~v~ig~~~--------~~~~~fg~~~~~~~~~f---~~~~~~GilGLg~~ 127 (329)
T 1dpj_A 68 --------NGTEFAIQYGTGS-LEGYISQDTLSIGDLT--------IPKQDFAEATSEPGLTF---AFGKFDGILGLGYD 127 (329)
T ss_dssp --------EEEEEEEEETTEE-EEEEEEEEEEEETTEE--------EEEEEEEEEEECCHHHH---TTCSCSEEEECSCG
T ss_pred --------CCcEEEEEECCce-EEEEEEEEEEEECCeE--------ECCeEEEEEEecCcccc---ccCCcceEEEeCCc
Confidence 3579999999995 6999999999998753 55899999998654 23 13468999999997
Q ss_pred CC------cHHHHhhhcCCC-CCceEEeccCCC----CcceEEeCCCCCC----CceEecCcCCCCceEEEEeEEEEcCE
Q 018004 227 NS------SMISQLASSGGV-RKMFAHCLDGIN----GGGIFAIGHVVQP----EVNKTPLVPNQPHYSINMTAVQVGLD 291 (362)
Q Consensus 227 ~~------s~~~~l~~~~~i-~~~Fs~~l~~~~----~~G~l~fGg~d~~----~~~~~p~~~~~~~w~v~l~~i~v~~~ 291 (362)
.. +++++|++||+| +++||+||.+.. ..|.|+|||+|+. ++.|+|+. +..+|.|.+++|+|+++
T Consensus 128 ~~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~ 206 (329)
T 1dpj_A 128 TISVDKVVPPFYNAIQQDLLDEKRFAFYLGDTSKDTENGGEATFGGIDESKFKGDITWLPVR-RKAYWEVKFEGIGLGDE 206 (329)
T ss_dssp GGCGGGCCCHHHHHHHTTCCSSSEEEEEECCGGGTCSSSEEEEESSCCGGGEEEEEEEEECS-SBTTBEEEEEEEEETTE
T ss_pred hhhccCCCCHHHHHHhcCCcCCCEEEEEecCCCCCCCCCcEEEEcCCChhhcCCceEEEEcC-CCceEEEEeeeEEECCe
Confidence 64 468999999999 699999998752 3799999999964 58899997 56899999999999998
Q ss_pred EeeCCCcccccCCCccEEEcccccccccChHHHHHHHHHHHHh
Q 018004 292 FLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQ 334 (362)
Q Consensus 292 ~~~~~~~~~~~~~~~~aiiDSGtt~~~lp~~~~~~i~~~~~~~ 334 (362)
.+.. ....+||||||++++||++++++|.++++++
T Consensus 207 ~~~~--------~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~ 241 (329)
T 1dpj_A 207 YAEL--------ESHGAAIDTGTSLITLPSGLAEMINAEIGAK 241 (329)
T ss_dssp EEEC--------SSCEEEECTTCSCEEECHHHHHHHHHHHTCE
T ss_pred EecC--------CCccEEeeCCCCcEECCHHHHHHHHHHhCCc
Confidence 7752 2456999999999999999999999999765
No 15
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=1.9e-41 Score=320.68 Aligned_cols=215 Identities=20% Similarity=0.326 Sum_probs=184.2
Q ss_pred CcccEEEEEEeCCCCceEEEEEEcCCCeeeEeCC--CCCCCCC--CCCCCccCCcccCCCCCccceecCCCcccCCCCCC
Q 018004 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCI--QCKECPR--RSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGG 147 (362)
Q Consensus 72 ~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~--~c~~C~~--~~~~~~~~~~y~~~~Sst~~~v~c~~~~C~~~~~~ 147 (362)
.+..|+++|.||||+|++.|+|||||+++||++. .|..|.. ....|..++.|||++|+|++..
T Consensus 10 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~------------- 76 (334)
T 1j71_A 10 EGPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQTNNFCKQEGTFDPSSSSSAQNL------------- 76 (334)
T ss_dssp CSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGSSCCBCGGGCTTCEEE-------------
T ss_pred CCcEEEEEEEEcCCCcEEEEEEcCCCCCEEEecCCCCCcCcccccccccccCCCcCCcccCCCcccC-------------
Confidence 3678999999999999999999999999999976 6765421 1224666789999999999984
Q ss_pred CCCCCCCCCCCcceeeeCCCCeEEEEEEEEEEEEecccCCccccccCceeeEEeeeeccCCCCCCCCcCcceeeecCCCC
Q 018004 148 PLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSN 227 (362)
Q Consensus 148 ~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GilGLg~~~ 227 (362)
.|.|.+.|++|+.+.|.+++|+|+|++.. ++++.||++.... ..+||||||++.
T Consensus 77 ---------~~~~~i~Yg~Gs~~~G~~~~D~v~~g~~~--------~~~~~fg~~~~~~---------~~~GilGLg~~~ 130 (334)
T 1j71_A 77 ---------NQDFSIEYGDLTSSQGSFYKDTVGFGGIS--------IKNQQFADVTTTS---------VDQGIMGIGFTA 130 (334)
T ss_dssp ---------EEEEEEEBTTSCEEEEEEEEEEEEETTEE--------EEEEEEEEEEEES---------SSSCEEECSCGG
T ss_pred ---------CCceEEEECCCCEEEEEEEEEEEEECCEE--------EccEEEEEEEecC---------CCccEEEEcCCc
Confidence 47899999999988999999999998753 5589999998753 368999999975
Q ss_pred C--------cHHHHhhhcCCC-CCceEEeccCC-CCcceEEeCCCCCCC----ceEecCcCCCCceEEEEeEEEEcCEEe
Q 018004 228 S--------SMISQLASSGGV-RKMFAHCLDGI-NGGGIFAIGHVVQPE----VNKTPLVPNQPHYSINMTAVQVGLDFL 293 (362)
Q Consensus 228 ~--------s~~~~l~~~~~i-~~~Fs~~l~~~-~~~G~l~fGg~d~~~----~~~~p~~~~~~~w~v~l~~i~v~~~~~ 293 (362)
. +++++|++||+| +++||+||.+. ...|.|+|||+|+.+ +.|+|+. ...+|.|.+++|+|+++.+
T Consensus 131 ~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~g~~~ 209 (334)
T 1j71_A 131 DEAGYNLYDNVPVTLKKQGIINKNAYSLYLNSEDASTGKIIFGGVDNAKYTGTLTALPVT-SSVELRVHLGSINFDGTSV 209 (334)
T ss_dssp GSSTTCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSEEEEEEEEECC-CSSSCEEEEEEEEETTEEE
T ss_pred ccCccccCCcHHHHHHHCCCCCccEEEEEeCCCCCCCeEEEEeeechHHccCceEEEEcc-CCCeEEEEEeEEEECCEec
Confidence 4 799999999999 69999999875 568999999999754 7899997 4469999999999999887
Q ss_pred eCCCcccccCCCccEEEcccccccccChHHHHHHHHHHHHhC
Q 018004 294 NLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQ 335 (362)
Q Consensus 294 ~~~~~~~~~~~~~~aiiDSGtt~~~lp~~~~~~i~~~~~~~~ 335 (362)
.. ...+||||||++++||++++++|++++++++
T Consensus 210 ~~---------~~~~iiDSGTt~~~lP~~~~~~l~~~~~~~~ 242 (334)
T 1j71_A 210 ST---------NADVVLDSGTTITYFSQSTADKFARIVGATW 242 (334)
T ss_dssp EE---------EEEEEECTTCSSEEECHHHHHHHHHHHTCEE
T ss_pred cC---------CccEEEeCCCCcEecCHHHHHHHHHHcCCcc
Confidence 53 2459999999999999999999999998876
No 16
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=2.4e-41 Score=321.04 Aligned_cols=215 Identities=23% Similarity=0.348 Sum_probs=184.6
Q ss_pred CcccEEEEEEeCCCCceEEEEEEcCCCeeeEeCC--CCCCCCCC--CCCCccCCcccCCCCCccceecCCCcccCCCCCC
Q 018004 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCI--QCKECPRR--SSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGG 147 (362)
Q Consensus 72 ~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~--~c~~C~~~--~~~~~~~~~y~~~~Sst~~~v~c~~~~C~~~~~~ 147 (362)
.+..|+++|.||||+|++.|+|||||+++||++. .|..|... ...|..++.|||++|+|++..
T Consensus 10 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~------------- 76 (342)
T 2qzx_A 10 EAITYTADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWRGDKGDFCKSAGSYSPASSRTSQNL------------- 76 (342)
T ss_dssp CSSCEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSSSCCTTGGGTTCCBCGGGCTTCEEE-------------
T ss_pred CCeEEEEEEEECCCCcEEEEEEeCCCCCeEEecCCCCccCccccCccccccCCCcCCcccCCCcccC-------------
Confidence 4678999999999999999999999999999976 67655321 234666789999999999984
Q ss_pred CCCCCCCCCCCcceeeeCCCCeEEEEEEEEEEEEecccCCccccccCceeeEEeeeeccCCCCCCCCcCcceeeecCCCC
Q 018004 148 PLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSN 227 (362)
Q Consensus 148 ~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GilGLg~~~ 227 (362)
.|.|.+.|++|+.+.|.+++|+|+|++.. ++++.|||+.... ..+||||||++.
T Consensus 77 ---------~~~~~i~Yg~Gs~~~G~~~~D~v~~g~~~--------v~~~~fg~~~~~~---------~~~GilGLg~~~ 130 (342)
T 2qzx_A 77 ---------NTRFDIKYGDGSYAKGKLYKDTVGIGGVS--------VRDQLFANVWSTS---------ARKGILGIGFQS 130 (342)
T ss_dssp ---------EEEEEEECTTSCEEEEEEEEEEEEETTEE--------EEEEEEEEEEEEC---------SSSCEEECSCGG
T ss_pred ---------CCcEEEEeCCCCeEEEEEEEEEEEECCEE--------ecceEEEEEEecC---------CCcCEEEEcccc
Confidence 47899999999988999999999998753 5589999998753 368999999975
Q ss_pred C--------cHHHHhhhcCCC-CCceEEeccCC-CCcceEEeCCCCCC----CceEecCcCCCCceEEEEeEEEEcCEEe
Q 018004 228 S--------SMISQLASSGGV-RKMFAHCLDGI-NGGGIFAIGHVVQP----EVNKTPLVPNQPHYSINMTAVQVGLDFL 293 (362)
Q Consensus 228 ~--------s~~~~l~~~~~i-~~~Fs~~l~~~-~~~G~l~fGg~d~~----~~~~~p~~~~~~~w~v~l~~i~v~~~~~ 293 (362)
. +++++|++||+| +++||+||.+. ...|.|+|||+|+. ++.|+|+.+ ..+|.|.+++|+|+++.+
T Consensus 131 ~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~-~~~~~v~l~~i~v~g~~~ 209 (342)
T 2qzx_A 131 GEATEFDYDNLPISLRNQGIIGKAAYSLYLNSAEASTGQIIFGGIDKAKYSGSLVDLPITS-EKKLTVGLRSVNVRGRNV 209 (342)
T ss_dssp GCSSSSCCCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECCC-SSSCEEEEEEEEETTEEE
T ss_pred ccCCCccCccHHHHHHHCCCcCccEEEEEeCCCCCCCeEEEECccchhhEecceEEEeccC-CceEEEEEeEEEECCEec
Confidence 3 799999999999 69999999875 56899999999864 589999974 469999999999999877
Q ss_pred eCCCcccccCCCccEEEcccccccccChHHHHHHHHHHHHhC
Q 018004 294 NLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQ 335 (362)
Q Consensus 294 ~~~~~~~~~~~~~~aiiDSGtt~~~lp~~~~~~i~~~~~~~~ 335 (362)
.. ...+||||||++++||++++++|++++++++
T Consensus 210 ~~---------~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~ 242 (342)
T 2qzx_A 210 DA---------NTNVLLDSGTTISYFTRSIVRNILYAIGAQM 242 (342)
T ss_dssp EE---------EEEEEECTTCSSEEECHHHHHHHHHHHTCEE
T ss_pred CC---------CcCEEEeCCCCCEEcCHHHHHHHHHHhCCee
Confidence 53 2459999999999999999999999998765
No 17
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=1.2e-41 Score=321.46 Aligned_cols=215 Identities=26% Similarity=0.367 Sum_probs=182.0
Q ss_pred CCcccEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCCCCCCCCCCccCCcccCCCCCccceecCCCcccCCCCCCCCC
Q 018004 71 DGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLT 150 (362)
Q Consensus 71 ~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~~c~~C~~~~~~~~~~~~y~~~~Sst~~~v~c~~~~C~~~~~~~~~ 150 (362)
..+..|+++|.||||+|++.|+|||||+++||+|..|..|.. ..++.|||++|+|++.++
T Consensus 12 ~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~-----~~~~~y~~~~SsT~~~~~--------------- 71 (329)
T 3c9x_A 12 SADSEYITSVSIGTPAQVLPLDFDTGSSDLWVFSSETPKSSA-----TGHAIYTPSKSSTSKKVS--------------- 71 (329)
T ss_dssp TTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCHHHH-----TTSCCBCGGGCTTCEECT---------------
T ss_pred CCCCEEEEEEEECCCCeEEEEEEcCCCCCeEEecCCCCcccc-----CCCCcCCcccCcCceEcC---------------
Confidence 367789999999999999999999999999999999987642 234799999999999853
Q ss_pred CCCCCCCCcceeeeCCCCeEEEEEEEEEEEEecccCCccccccCceeeEEeeeeccCCCCCCCCcCcceeeecCCCCC--
Q 018004 151 DCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS-- 228 (362)
Q Consensus 151 ~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GilGLg~~~~-- 228 (362)
.|.|.+.|++|+.+.|.+++|+|+|++.. ++++.|||+...++.+. .....+||||||++..
T Consensus 72 ------~~~~~i~Yg~Gs~~~G~~~~D~v~ig~~~--------v~~~~fg~~~~~~~~~~--~~~~~~GilGLg~~~~s~ 135 (329)
T 3c9x_A 72 ------GASWSISYGDGSSSSGDVYTDKVTIGGFS--------VNTQGVESATRVSTEFV--QDTVISGLVGLAFDSGNQ 135 (329)
T ss_dssp ------TCBEEEECTTSCEEEEEEEEEEEEETTEE--------EEEEEEEEEEEECHHHH--HCTTCCEEEECSCGGGCC
T ss_pred ------CCeEEEEeCCCCcEEEEEEEEEEEECCEE--------EcceEEEEEEecCcccc--ccCCCceeEEeCcccccc
Confidence 47899999999977999999999998753 55899999998655432 1235799999998643
Q ss_pred -------cHHHHhhhcCCC-CCceEEeccCCCCcceEEeCCCCC----CCceEecCcCCCCceEEEEeEEEEcCEEeeCC
Q 018004 229 -------SMISQLASSGGV-RKMFAHCLDGINGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQVGLDFLNLP 296 (362)
Q Consensus 229 -------s~~~~l~~~~~i-~~~Fs~~l~~~~~~G~l~fGg~d~----~~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~~ 296 (362)
+++++|+++ | +++||+||.+ +..|.|+|||+|+ +++.|+|+.++..+|.|.+++|+|+++.+.
T Consensus 136 ~~~~~~~~~~~~l~~~--i~~~~FS~~l~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~~-- 210 (329)
T 3c9x_A 136 VRPHPQKTWFSNAASS--LAEPLFTADLRH-GQNGSYNFGYIDTSVAKGPVAYTPVDNSQGFWEFTASGYSVGGGKLN-- 210 (329)
T ss_dssp CBSSCCCCHHHHHHTT--SSSSEEEEECCS-SSCEEEEESSCCGGGCSSCEEEEECBCTTSSCEEEECCEEETTCCCC--
T ss_pred cCCCCCCCHHHHHHHh--cCCCEEEEEecC-CCCcEEEEeCcChhhcccceEEEEccCCCceEEEEEeeEEECCEecc--
Confidence 488999986 6 7999999987 4689999999995 568999998667899999999999987653
Q ss_pred CcccccCCCccEEEcccccccccChHHHHHHHHHHH
Q 018004 297 TDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKII 332 (362)
Q Consensus 297 ~~~~~~~~~~~aiiDSGtt~~~lp~~~~~~i~~~~~ 332 (362)
.....+||||||++++||++++++|.+++.
T Consensus 211 ------~~~~~aiiDSGTt~~~lp~~~~~~i~~~i~ 240 (329)
T 3c9x_A 211 ------RNSIDGIADTGTTLLLLDDNVVDAYYANVQ 240 (329)
T ss_dssp ------SCCEEEEECTTCCSEEECHHHHHHHHTTCT
T ss_pred ------CCCceEEEECCCCcEeCCHHHHHHHHHhCC
Confidence 124579999999999999999999988873
No 18
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=1.7e-41 Score=320.35 Aligned_cols=213 Identities=23% Similarity=0.387 Sum_probs=180.9
Q ss_pred CcccEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCCCCCCCCCCccCCcccCCCCCccceecCCCcccCCCCCCCCCC
Q 018004 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLTD 151 (362)
Q Consensus 72 ~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~~c~~C~~~~~~~~~~~~y~~~~Sst~~~v~c~~~~C~~~~~~~~~~ 151 (362)
.+..|+++|.||||+|++.|+|||||+++||+|..|..|.. .++.|||++|+|++.++
T Consensus 13 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~------~~~~y~~~~SsT~~~~~---------------- 70 (329)
T 1oew_A 13 LDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETTASEV------XQTIYTPSKSTTAKLLS---------------- 70 (329)
T ss_dssp TCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCGGGC-------CCCBCGGGCTTCEEEE----------------
T ss_pred CCCEEEEEEEECCCCeEEEEEECCCCCCeEEecCCCCcccc------ccCccCCccCccceecC----------------
Confidence 57789999999999999999999999999999999987742 34799999999999864
Q ss_pred CCCCCCCcceeeeCCCCeEEEEEEEEEEEEecccCCccccccCceeeEEeeeeccCCCCCCCCcCcceeeecCCCCC---
Q 018004 152 CTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS--- 228 (362)
Q Consensus 152 c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GilGLg~~~~--- 228 (362)
.|.|.+.|++|+.+.|.+++|+|+|++.. ++++.|||+...++.+. .....+||||||++..
T Consensus 71 -----~~~~~i~Yg~Gs~~~G~~~~D~v~~g~~~--------v~~~~fg~~~~~~~~~~--~~~~~~GilGLg~~~~s~~ 135 (329)
T 1oew_A 71 -----GATWSISYGDGSSSSGDVYTDTVSVGGLT--------VTGQAVESAKKVSSSFT--EDSTIDGLLGLAFSTLNTV 135 (329)
T ss_dssp -----EEEEEEECTTSCEEEEEEEEEEEEETTEE--------EEEEEEEEEEEECHHHH--HCTTCCEEEECSCGGGCCC
T ss_pred -----CCeEEEEeCCCCcEEEEEEEEEEEECCEE--------EeeeEEEEEEecCcccc--ccCCCceEEEecccccccc
Confidence 36899999999977999999999998754 55899999998655432 1235799999998643
Q ss_pred ------cHHHHhhhcCCC-CCceEEeccCCCCcceEEeCCCCC----CCceEecCcCCCCceEEEEeEEEEcCEEeeCCC
Q 018004 229 ------SMISQLASSGGV-RKMFAHCLDGINGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQVGLDFLNLPT 297 (362)
Q Consensus 229 ------s~~~~l~~~~~i-~~~Fs~~l~~~~~~G~l~fGg~d~----~~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~ 297 (362)
+++++|+++ | +++||+||.+ +..|.|+|||+|+ +++.|+|++++..+|.|.+++|+|+++.+.
T Consensus 136 ~~~~~~~~~~~l~~~--i~~~~FS~~L~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~~--- 209 (329)
T 1oew_A 136 SPTQQKTFFDNAKAS--LDSPVFTADLGY-HAPGTYNFGFIDTTAYTGSITYTAVSTKQGFWEWTSTGYAVGSGTFK--- 209 (329)
T ss_dssp BSSCCCCHHHHHTTT--SSSSEEEEECCS-SSCEEEEESCCCTTSSSSCCEEEECBCTTSSCEEEEEEEEETTSCCE---
T ss_pred CcCCCCCHHHHHHHh--ccCcEEEEEccC-CCCeEEEEeccChHhcccceEEEEccCCCceEEEEEeeEEECCeecc---
Confidence 488999987 6 7999999987 4689999999996 468999998667899999999999987653
Q ss_pred cccccCCCccEEEcccccccccChHHHHHHHHHHH
Q 018004 298 DVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKII 332 (362)
Q Consensus 298 ~~~~~~~~~~aiiDSGtt~~~lp~~~~~~i~~~~~ 332 (362)
.....+||||||++++||++++++|++++.
T Consensus 210 -----~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~ 239 (329)
T 1oew_A 210 -----STSIDGIADTGTTLLYLPATVVSAYWAQVS 239 (329)
T ss_dssp -----EEEEEEEECTTCCSEEECHHHHHHHHTTST
T ss_pred -----CCCceEEEeCCCCCEECCHHHHHHHHHhCC
Confidence 123569999999999999999999998873
No 19
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=3.4e-41 Score=319.84 Aligned_cols=220 Identities=24% Similarity=0.398 Sum_probs=186.4
Q ss_pred CCCcccEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCCCCCCCCCCccCCcccCCCCCccceecCCCcccCCCCCCCC
Q 018004 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPL 149 (362)
Q Consensus 70 ~~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~~c~~C~~~~~~~~~~~~y~~~~Sst~~~v~c~~~~C~~~~~~~~ 149 (362)
++.+..|+++|.||||+|+++|+|||||+++||+|..|..|. ..|..++.|||++|+|++.
T Consensus 14 n~~d~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~---~~C~~~~~y~~~~SsT~~~---------------- 74 (341)
T 3k1w_A 14 NYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLY---TACVYHKLFDASDSSSYKH---------------- 74 (341)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTC---HHHHTSCCBCGGGCTTCEE----------------
T ss_pred EccCCEEEEEEEEcCCCcEEEEEEeCCCcceEEccCCCCCCC---CcccCCCCCCCCcCcCeeE----------------
Confidence 456889999999999999999999999999999999987321 1233447999999999997
Q ss_pred CCCCCCCCCcceeeeCCCCeEEEEEEEEEEEEecccCCccccccCceeeEEeeeeccCC-CCCCCCcCcceeeecCCCCC
Q 018004 150 TDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGN-LDSTNEEALDGIIGFGKSNS 228 (362)
Q Consensus 150 ~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~~-~~~~~~~~~~GilGLg~~~~ 228 (362)
..|.|.+.|++|+ +.|.+++|+|+|++.. + ++.|||+....+. + ....++||||||++..
T Consensus 75 ------~~~~~~i~Yg~gs-~~G~~~~D~v~ig~~~--------v-~~~fg~~~~~~~~~~---~~~~~~GilGLg~~~~ 135 (341)
T 3k1w_A 75 ------NGTELTLRYSTGT-VSGFLSQDIITVGGIT--------V-TQMFGEVTEMPALPF---MLAEFDGVVGMGFIEQ 135 (341)
T ss_dssp ------EEEEEEEEETTEE-EEEEEEEEEEEETTEE--------E-EEEEEEEEECCHHHH---TTCSSSEEEECSCGGG
T ss_pred ------CCCEEEEEECCcE-EEEEEEEEEEEECCce--------e-eEEEEEEEEcccccc---ccCCcceEEECCchhh
Confidence 3479999999998 6999999999998753 5 8999999987653 3 2346899999999765
Q ss_pred ------cHHHHhhhcCCC-CCceEEeccCCC-----CcceEEeCCCCCC----CceEecCcCCCCceEEEEeEEEEcCEE
Q 018004 229 ------SMISQLASSGGV-RKMFAHCLDGIN-----GGGIFAIGHVVQP----EVNKTPLVPNQPHYSINMTAVQVGLDF 292 (362)
Q Consensus 229 ------s~~~~l~~~~~i-~~~Fs~~l~~~~-----~~G~l~fGg~d~~----~~~~~p~~~~~~~w~v~l~~i~v~~~~ 292 (362)
+++++|++||+| +++||+||.+.. ..|.|+|||+|+. ++.|+|+. +..+|.|.+++|+|+++.
T Consensus 136 s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~w~v~l~~i~v~~~~ 214 (341)
T 3k1w_A 136 AIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLI-KTGVWQIQMKGVSVGSST 214 (341)
T ss_dssp CGGGCCCHHHHHHHHTCBSSSEEEEEECCCC-----CCEEEEESSCCGGGEEEEEEEEECS-STTSCEEEECCEEETTEE
T ss_pred cccCCCCHHHHHHHCCCCCCCEEEEEEeCCCCcCCCCCCEEEECccChHHccCceEEEecC-CCCEEEEEEeEEEECCEE
Confidence 489999999999 699999999852 3799999999974 58899997 568999999999999987
Q ss_pred eeCCCcccccCCCccEEEcccccccccChHHHHHHHHHHHHhC
Q 018004 293 LNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQ 335 (362)
Q Consensus 293 ~~~~~~~~~~~~~~~aiiDSGtt~~~lp~~~~~~i~~~~~~~~ 335 (362)
+.. .....++|||||++++||++++++|++++++..
T Consensus 215 ~~~-------~~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~ 250 (341)
T 3k1w_A 215 LLC-------EDGCLALVDTGASYISGSTSSIEKLMEALGAKK 250 (341)
T ss_dssp EEC-------TTCEEEEECTTCSSEEECHHHHHHHHHHHTCEE
T ss_pred eec-------CCCCEEEEECCCChhcCCHHHHHHHHHHcCCee
Confidence 532 234679999999999999999999999998764
No 20
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=1e-40 Score=316.70 Aligned_cols=216 Identities=25% Similarity=0.380 Sum_probs=186.1
Q ss_pred CcccEEEEEEeCCCCceEEEEEEcCCCeeeEeCCC--CCCCCCC--CCCCccCCcccCCCCCccceecCCCcccCCCCCC
Q 018004 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQ--CKECPRR--SSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGG 147 (362)
Q Consensus 72 ~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~~--c~~C~~~--~~~~~~~~~y~~~~Sst~~~v~c~~~~C~~~~~~ 147 (362)
.+++|+++|.||||+|++.|+|||||+++||++.+ |..|... ...|..++.|||++|+|++.+.
T Consensus 10 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~------------ 77 (342)
T 3pvk_A 10 EQVTYAADITVGSNNQKLNVIVDTGSSDLWVPDVNVDCQVTYSDQTADFCKQKGTYDPSGSSASQDLN------------ 77 (342)
T ss_dssp CSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGTTCCBCGGGCTTCEEEE------------
T ss_pred CCcEEEEEEEEcCCCcEEEEEEECCCcceEEEcCCCCCcccccccccCCCCCCCcCCCccCcceeecC------------
Confidence 46789999999999999999999999999999875 7666432 2346667899999999999854
Q ss_pred CCCCCCCCCCCcceeeeCCCCeEEEEEEEEEEEEecccCCccccccCceeeEEeeeeccCCCCCCCCcCcceeeecCCCC
Q 018004 148 PLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSN 227 (362)
Q Consensus 148 ~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GilGLg~~~ 227 (362)
|.|.+.|++|+.+.|.+++|+|+|++.. ++++.||+++... ..+||||||++.
T Consensus 78 ----------~~~~i~Yg~gs~~~G~~~~D~v~ig~~~--------v~~~~fg~~~~~~---------~~~GilGLg~~~ 130 (342)
T 3pvk_A 78 ----------TPFKIGYGDGSSSQGTLYKDTVGFGGVS--------IKNQVLADVDSTS---------IDQGILGVGYKT 130 (342)
T ss_dssp ----------EEEEEECSSSCEEEEEEEEEEEEETTEE--------EEEEEEEEEEEES---------SSSCEEECSCGG
T ss_pred ----------CeEEEEecCCCeEEEEEEEEEEEECCEE--------ecceEEEEEEccC---------CCccEEEecCcc
Confidence 7899999999978999999999999754 5589999998753 368999999976
Q ss_pred -------CcHHHHhhhcCCC-CCceEEeccCC-CCcceEEeCCCCC----CCceEecCcCCCCceEEEEeEEEEcCEEee
Q 018004 228 -------SSMISQLASSGGV-RKMFAHCLDGI-NGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQVGLDFLN 294 (362)
Q Consensus 228 -------~s~~~~l~~~~~i-~~~Fs~~l~~~-~~~G~l~fGg~d~----~~~~~~p~~~~~~~w~v~l~~i~v~~~~~~ 294 (362)
.+++++|++||+| +++||+||.+. ...|.|+|||+|+ +++.|+|+.. ..+|.|.+++|+|+++.+.
T Consensus 131 ~~~~~~~~~~~~~L~~qg~i~~~~fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~-~~~~~v~l~~i~v~g~~~~ 209 (342)
T 3pvk_A 131 NEAGGSYDNVPVTLKKQGVIAKNAYSLYLNSPDAATGQIIFGGVDNAKYSGSLIALPVTS-DRELRISLGSVEVSGKTIN 209 (342)
T ss_dssp GCSSCSSCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECCC-SSSCEEEEEEEEETTEEEE
T ss_pred ccccccCCcHHHHHHhcCCCCCceEEEEeCCCCCCCcEEEECccCccceeeeeEEeecCc-cceEEEEEeEEEECCEEec
Confidence 4799999999999 69999999875 4579999999996 4589999974 4699999999999999875
Q ss_pred CCCcccccCCCccEEEcccccccccChHHHHHHHHHHHHhC
Q 018004 295 LPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQ 335 (362)
Q Consensus 295 ~~~~~~~~~~~~~aiiDSGtt~~~lp~~~~~~i~~~~~~~~ 335 (362)
.. ...++|||||++++||++++++|.+++++++
T Consensus 210 ~~--------~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~ 242 (342)
T 3pvk_A 210 TD--------NVDVLLDSGTTITYLQQDLADQIIKAFNGKL 242 (342)
T ss_dssp EE--------EEEEEECTTCSSEEECHHHHHHHHHHTTCEE
T ss_pred CC--------CceEEEeCCCCCeecCHHHHHHHHHHcCCee
Confidence 32 2459999999999999999999999998765
No 21
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=1.8e-40 Score=314.75 Aligned_cols=209 Identities=23% Similarity=0.365 Sum_probs=180.2
Q ss_pred CcccEEEEEEeCCCCceEEEEEEcCCCeeeEeCCC--C---CCCCCCCCCCccCCcccCCCCCccceecCCCcccCCCCC
Q 018004 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQ--C---KECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYG 146 (362)
Q Consensus 72 ~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~~--c---~~C~~~~~~~~~~~~y~~~~Sst~~~v~c~~~~C~~~~~ 146 (362)
.++.|+++|.||||+|++.|+|||||+++||++.. | ..|. .++.|||++|+|++.+.
T Consensus 10 ~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~~~C~~~~~C~-------~~~~y~~~~SsT~~~~~----------- 71 (339)
T 3fv3_A 10 EGPSYASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCGKGVDCK-------SSGTFTPSSSSSYKNLG----------- 71 (339)
T ss_dssp CSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECTTCCTT-------TTCCBCGGGCTTCEEEE-----------
T ss_pred CCCEEEEEEEEcCCCcEEEEEEeCCCCceEEecCCCCCCCCCCCC-------CCCcCCCccCcceeeCC-----------
Confidence 35689999999999999999999999999999543 4 3454 34799999999999854
Q ss_pred CCCCCCCCCCCCcceeeeCCCCeEEEEEEEEEEEEecccCCccccccCceeeEEeeeeccCCCCCCCCcCcceeeecCCC
Q 018004 147 GPLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKS 226 (362)
Q Consensus 147 ~~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GilGLg~~ 226 (362)
|.|.+.|++|+.+.|.+++|+|+|++.. ++++.||++....+ .+||||||++
T Consensus 72 -----------~~~~i~Yg~gs~~~G~~~~D~v~~g~~~--------v~~~~fg~~~~~~~---------~~GilGLg~~ 123 (339)
T 3fv3_A 72 -----------AAFTIRYGDGSTSQGTWGKDTVTINGVS--------ITGQQIADVTQTSV---------DQGILGIGYT 123 (339)
T ss_dssp -----------EEEEEECTTSCEEEEEEEEEEEEETTEE--------EEEEEEEEEEEESS---------SSCEEECSCG
T ss_pred -----------ceEEEEECCCceEEEEEEEEEEEECCEE--------ECceEEEEEEecCC---------CceeEEecCc
Confidence 7999999999888999999999999854 55899999988642 5899999997
Q ss_pred CC----------------cHHHHhhhcCCC-CCceEEeccCC-CCcceEEeCCCCC----CCceEecCcCCCCceEEEEe
Q 018004 227 NS----------------SMISQLASSGGV-RKMFAHCLDGI-NGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMT 284 (362)
Q Consensus 227 ~~----------------s~~~~l~~~~~i-~~~Fs~~l~~~-~~~G~l~fGg~d~----~~~~~~p~~~~~~~w~v~l~ 284 (362)
.. +|+++|++||+| +++||+||.+. ...|.|+|||+|+ +++.|+|+.. ..+|.|.++
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~L~~~g~i~~~~fsl~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~-~~~~~v~l~ 202 (339)
T 3fv3_A 124 SNEAVYDTSGRQTTPNYDNVPVTLKKQGKIRTNAYSLYLNSPSAETGTIIFGGVDNAKYSGKLVAEQVTS-SQALTISLA 202 (339)
T ss_dssp GGCCCBCTTSCBCSCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEEBCC-SSSCEEEEE
T ss_pred cccccccccccccCccCCcHHHHHHHCCCCCCceEEEEECCCCCCCeEEEEeeechHHeecceEEEeccc-CccEEEEEE
Confidence 53 389999999999 69999999886 4589999999996 4689999974 569999999
Q ss_pred EEEEcCEEeeCCCcccccCCCccEEEcccccccccChHHHHHHHHHHHHhCC
Q 018004 285 AVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQP 336 (362)
Q Consensus 285 ~i~v~~~~~~~~~~~~~~~~~~~aiiDSGtt~~~lp~~~~~~i~~~~~~~~~ 336 (362)
+|+|+++.+... ..++|||||++++||++++++|++++++.+.
T Consensus 203 ~i~v~g~~~~~~---------~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~ 245 (339)
T 3fv3_A 203 SVNLKGSSFSFG---------DGALLDSGTTLTYFPSDFAAQLADKAGARLV 245 (339)
T ss_dssp EEEESSCEEEEE---------EEEEECTTBSSEEECHHHHHHHHHHHTCEEE
T ss_pred EEEECCEeecCC---------ccEEEeCCCCCEecCHHHHHHHHHHcCCEEc
Confidence 999999877532 4599999999999999999999999987653
No 22
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=3.8e-40 Score=324.21 Aligned_cols=238 Identities=22% Similarity=0.300 Sum_probs=191.3
Q ss_pred CcccEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCCCCCCCCCCccCCcccCCCCCccceecCCCcccCCCCCCCCCC
Q 018004 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLTD 151 (362)
Q Consensus 72 ~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~~c~~C~~~~~~~~~~~~y~~~~Sst~~~v~c~~~~C~~~~~~~~~~ 151 (362)
.+..|+++|+||||+|+++|+|||||+++||+|..| |.. ++.|||++|+|++.+
T Consensus 72 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~~c--c~~-------~~~y~~~~SsT~~~~----------------- 125 (455)
T 3lpj_A 72 SGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH--PFL-------HRYYQRQLSSTYRDL----------------- 125 (455)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC--TTC-------SCCCCGGGCTTCEEE-----------------
T ss_pred CCCEEEEEEEECCCCeEEEEEEcCCCcceEEecccc--ccc-------CCcccCCCCCCcccC-----------------
Confidence 455899999999999999999999999999999887 432 378999999999984
Q ss_pred CCCCCCCcceeeeCCCCeEEEEEEEEEEEEecccCCccccccCceeeEEeeeeccCCCCCCCCcCcceeeecCCCC----
Q 018004 152 CTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSN---- 227 (362)
Q Consensus 152 c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GilGLg~~~---- 227 (362)
.|.|.+.|++|+. .|.+++|+|+|++.. . ....+.|+++....+.|. ....++||||||++.
T Consensus 126 -----~~~~~i~Yg~Gs~-~G~~~~Dtv~ig~~~-~-----~~~~~~~~~~~~~~~~~~--~~~~~dGIlGLg~~~~s~~ 191 (455)
T 3lpj_A 126 -----RKGVYVPYTQGKW-EGELGTDLVSIPHGP-N-----VTVRANIAAITESDKFFI--NGSNWEGILGLAYAEIARP 191 (455)
T ss_dssp -----EEEEEEECSSCEE-EEEEEEEEEECTTSC-S-----CEEEEEEEEEEEEESCSC--TTCCCCEEEECSCGGGCSS
T ss_pred -----CccEEEEeCCeEE-EEEEEEEEEEECCCc-c-----eeeEEEEEEEEccCcccc--cCCCcceEEEeCccccccc
Confidence 4799999999996 999999999998521 0 112467888887766553 235689999999864
Q ss_pred ----CcHHHHhhhcCCCCCceEEeccCC-----------CCcceEEeCCCCCC----CceEecCcCCCCceEEEEeEEEE
Q 018004 228 ----SSMISQLASSGGVRKMFAHCLDGI-----------NGGGIFAIGHVVQP----EVNKTPLVPNQPHYSINMTAVQV 288 (362)
Q Consensus 228 ----~s~~~~l~~~~~i~~~Fs~~l~~~-----------~~~G~l~fGg~d~~----~~~~~p~~~~~~~w~v~l~~i~v 288 (362)
.+++++|++|++|+++||+||.+. ...|.|+|||+|+. ++.|+|+. ...+|.|.+++|+|
T Consensus 192 ~~~~~~~~~~L~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~w~v~l~~i~v 270 (455)
T 3lpj_A 192 DDSLEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIR-REWYYEVIIVRVEI 270 (455)
T ss_dssp CTTSCCHHHHHHHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECC-SBTTBBCCEEEEEE
T ss_pred cCCCCcHHHHHHHccCCCceeEEEeccccccccccccccCCCceEEECCcCcccccCceEEEecC-CCceeEEEEeEEEE
Confidence 368999999999988999999752 35799999999974 58899997 46899999999999
Q ss_pred cCEEeeCCCcccccCCCccEEEcccccccccChHHHHHHHHHHHHhCCCCcccc---cCCcCceeecc
Q 018004 289 GLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQPDLKVHT---VHDEYTCFQYS 353 (362)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~aiiDSGtt~~~lp~~~~~~i~~~~~~~~~~~~~~~---~~~~~~C~~~~ 353 (362)
+++.+.++...+ +...+||||||++++||++++++|+++|++.+....... ......|++.+
T Consensus 271 ~g~~~~~~~~~~---~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~g~~~~C~~~~ 335 (455)
T 3lpj_A 271 NGQDLKMDCKEY---NYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAG 335 (455)
T ss_dssp TTEECCCCGGGG---GSSCEEECTTSSSEEEEHHHHHHHHHHHHHHTTTSCCCHHHHTTCSCEEESTT
T ss_pred CCEEcccccccc---CCCeEEEECCCcceeCCHHHHHHHHHHhhhhccccccCcccccCcceeccccc
Confidence 999887654433 246799999999999999999999999999865222111 11134798754
No 23
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=5.2e-41 Score=322.22 Aligned_cols=212 Identities=21% Similarity=0.378 Sum_probs=182.2
Q ss_pred CCCcccEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCC--CCCCCCCCCccCCcccCCCCCccceecCCCcccCCCCCC
Q 018004 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK--ECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGG 147 (362)
Q Consensus 70 ~~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~~c~--~C~~~~~~~~~~~~y~~~~Sst~~~v~c~~~~C~~~~~~ 147 (362)
++.+..|+++|.||||+|++.|+|||||+++||+|..|. .|.. ++.|||++|+|++..
T Consensus 58 ~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~-------~~~y~~~~SsT~~~~------------- 117 (375)
T 1miq_A 58 DVANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSKKCNSSGCSI-------KNLYDSSKSKSYEKD------------- 117 (375)
T ss_dssp GTBCEEEECCCEETTTTEECCEEEETTCCCEEEEBTTCCSSGGGG-------SCCBCGGGCTTCEEE-------------
T ss_pred cCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEccCCCCcccccC-------CCcCCCccCCceEEC-------------
Confidence 456789999999999999999999999999999999886 4543 479999999999984
Q ss_pred CCCCCCCCCCCcceeeeCCCCeEEEEEEEEEEEEecccCCccccccCceeeEEeeee----ccCCCCCCCCcCcceeeec
Q 018004 148 PLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGAR----QSGNLDSTNEEALDGIIGF 223 (362)
Q Consensus 148 ~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~----~~~~~~~~~~~~~~GilGL 223 (362)
.|.|.+.|++|+ +.|.+++|+|+|++.. +++ .|||+.. +. .| ....++|||||
T Consensus 118 ---------~~~~~i~Yg~Gs-~~G~~~~Dtv~ig~~~--------v~~-~Fg~~~~~~~~~~-~f---~~~~~dGilGL 174 (375)
T 1miq_A 118 ---------GTKVDITYGSGT-VKGFFSKDLVTLGHLS--------MPY-KFIEVTDTDDLEP-IY---SSVEFDGILGL 174 (375)
T ss_dssp ---------EEEEEEEETTEE-EEEEEEEEEEEETTEE--------EEE-EEEEEEECGGGTT-HH---HHSCCCEEEEC
T ss_pred ---------CcEEEEEeCCCe-EEEEEEEEEEEEcCce--------ECc-EEEEEEecccccc-cc---ccCCCceEEeC
Confidence 479999999998 5999999999998753 457 9999998 44 33 13457999999
Q ss_pred CCCCC------cHHHHhhhcCCC-CCceEEeccCC-CCcceEEeCCCCCC----CceEecCcCCCCceEEEEeEEEEcCE
Q 018004 224 GKSNS------SMISQLASSGGV-RKMFAHCLDGI-NGGGIFAIGHVVQP----EVNKTPLVPNQPHYSINMTAVQVGLD 291 (362)
Q Consensus 224 g~~~~------s~~~~l~~~~~i-~~~Fs~~l~~~-~~~G~l~fGg~d~~----~~~~~p~~~~~~~w~v~l~~i~v~~~ 291 (362)
|++.. +++++|++||+| +++||+||.+. ...|.|+|||+|+. ++.|+|+. +..+|.|.++ |+|+++
T Consensus 175 g~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~w~v~l~-i~v~g~ 252 (375)
T 1miq_A 175 GWKDLSIGSIDPIVVELKNQNKIDNALFTFYLPVHDVHAGYLTIGGIEEKFYEGNITYEKLN-HDLYWQIDLD-VHFGKQ 252 (375)
T ss_dssp SSCCTTCSSCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEEBS-SSSSSEEEEE-EEETTE
T ss_pred CCCcccccCCCCHHHHHHhccCcCCCEEEEEecCCCCCCeEEEEcccCHHHcCCceEEEecC-CCceEEEEEE-EEECCE
Confidence 99764 589999999999 69999999985 35899999999964 58899996 5689999999 999998
Q ss_pred EeeCCCcccccCCCccEEEcccccccccChHHHHHHHHHHHHhCC
Q 018004 292 FLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQP 336 (362)
Q Consensus 292 ~~~~~~~~~~~~~~~~aiiDSGtt~~~lp~~~~~~i~~~~~~~~~ 336 (362)
.+ . ...+||||||+++++|++++++|.++++++++
T Consensus 253 ~~----~------~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~ 287 (375)
T 1miq_A 253 TM----E------KANVIVDSGTTTITAPSEFLNKFFANLNVIKV 287 (375)
T ss_dssp EE----E------EEEEEECTTBSSEEECHHHHHHHHHHHTCEEC
T ss_pred Ec----c------cceEEecCCCccEEcCHHHHHHHHHHhCCccc
Confidence 76 1 35699999999999999999999999987543
No 24
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=6.5e-40 Score=315.86 Aligned_cols=221 Identities=24% Similarity=0.337 Sum_probs=182.6
Q ss_pred CcccEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCCCCCCCCCCccCCcccCCCCCccceecCCCcccCCCCCCCCCC
Q 018004 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLTD 151 (362)
Q Consensus 72 ~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~~c~~C~~~~~~~~~~~~y~~~~Sst~~~v~c~~~~C~~~~~~~~~~ 151 (362)
.+..|+++|+||||+|++.|+|||||+++||+|..|..|. +.|||++|+|++.+
T Consensus 11 ~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~~~---------~~f~~~~SsT~~~~----------------- 64 (383)
T 2ewy_A 11 SGRGYYLEMLIGTPPQKLQILVDTGSSNFAVAGTPHSYID---------TYFDTERSSTYRSK----------------- 64 (383)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCBTTBS---------CCCCGGGCTTCEEE-----------------
T ss_pred CCCcEEEEEEecCCCceEEEEEecCCCceEEecCCCCccc---------cCcccccCccceeC-----------------
Confidence 4567999999999999999999999999999999887663 68999999999985
Q ss_pred CCCCCCCcceeeeCCCCeEEEEEEEEEEEEecccCCccccccCceeeEEeeeeccCCCCCCCCcCcceeeecCCCCC---
Q 018004 152 CTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS--- 228 (362)
Q Consensus 152 c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GilGLg~~~~--- 228 (362)
.|.|.+.|++|+. .|.+++|+|+|++.... ...+.|++.....+.|. ....++||||||++..
T Consensus 65 -----~~~~~i~Yg~Gs~-~G~~~~Dtv~i~~~~~~------~~~~~~~~~~~~~~~~~--~~~~~dGilGLg~~~~s~~ 130 (383)
T 2ewy_A 65 -----GFDVTVKYTQGSW-TGFVGEDLVTIPKGFNT------SFLVNIATIFESENFFL--PGIKWNGILGLAYATLAKP 130 (383)
T ss_dssp -----EEEEEEECSSCEE-EEEEEEEEEEETTTEEE------EEEEEEEEEEEEESCSC--TTCCCCEEEECSCGGGCSS
T ss_pred -----CceEEEEECCcEE-EEEEEEEEEEECCCccc------eeEEEEEEEEeecceee--ccCcCceEEecCchhcccc
Confidence 3689999999985 99999999999853211 11467888776555442 1346799999998653
Q ss_pred -----cHHHHhhhcCCCCCceEEeccC--------CCCcceEEeCCCCC----CCceEecCcCCCCceEEEEeEEEEcCE
Q 018004 229 -----SMISQLASSGGVRKMFAHCLDG--------INGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQVGLD 291 (362)
Q Consensus 229 -----s~~~~l~~~~~i~~~Fs~~l~~--------~~~~G~l~fGg~d~----~~~~~~p~~~~~~~w~v~l~~i~v~~~ 291 (362)
+++++|++|+.|+++||+||.+ ....|.|+|||+|+ +++.|+|+. ...+|.|.+++|+|+++
T Consensus 131 ~~~~~~~~~~l~~q~~i~~~FS~~l~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~g~ 209 (383)
T 2ewy_A 131 SSSLETFFDSLVTQANIPNVFSMQMCGAGLPVAGSGTNGGSLVLGGIEPSLYKGDIWYTPIK-EEWYYQIEILKLEIGGQ 209 (383)
T ss_dssp CTTSCCHHHHHHHHHTCCSCEEEEECCC---------CCEEEEETSCCGGGCCSCEEEEECS-SBTTBBCCEEEEEETTE
T ss_pred cccccCHHHHHHHccCCCcceEEEeeccccccccCCCCCeEEEeCccchhhccCccEEEecC-CCceEEEEEEEEEECCE
Confidence 5889999999998899999964 14579999999985 568999997 45899999999999999
Q ss_pred EeeCCCcccccCCCccEEEcccccccccChHHHHHHHHHHHHhCC
Q 018004 292 FLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQP 336 (362)
Q Consensus 292 ~~~~~~~~~~~~~~~~aiiDSGtt~~~lp~~~~~~i~~~~~~~~~ 336 (362)
.+.++.+.+. ...+||||||++++||++++++|++++.+...
T Consensus 210 ~~~~~~~~~~---~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~ 251 (383)
T 2ewy_A 210 SLNLDCREYN---ADKAIVDSGTTLLRLPQKVFDAVVEAVARASL 251 (383)
T ss_dssp ECCCCTTTTT---SSCEEECTTCSSEEEEHHHHHHHHHHHHHTTC
T ss_pred EccccccccC---CccEEEEcCCccccCCHHHHHHHHHHHhhhcc
Confidence 8876544332 45799999999999999999999999998865
No 25
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=1.9e-40 Score=324.34 Aligned_cols=212 Identities=20% Similarity=0.326 Sum_probs=182.5
Q ss_pred CCCcccEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCC--CCCCCCCCCccCCcccCCCCCccceecCCCcccCCCCCC
Q 018004 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK--ECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGG 147 (362)
Q Consensus 70 ~~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~~c~--~C~~~~~~~~~~~~y~~~~Sst~~~v~c~~~~C~~~~~~ 147 (362)
++.+..|+++|+||||+|++.|++||||+++||+|..|. .|.. ++.|||++|+|++..
T Consensus 133 n~~d~~Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~~C~s~~C~~-------~~~ydps~SsT~~~~------------- 192 (451)
T 3qvc_A 133 DLANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKCTSESCES-------KNHYDSSKSKTYEKD------------- 192 (451)
T ss_dssp GGBCEEEEEEEEETTTTEEEEEEEESSBCSEEEEBTTCCSGGGTT-------SCCBCGGGCTTCEEE-------------
T ss_pred ecCCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCccccCC-------CCCCCCCCCcccccC-------------
Confidence 456889999999999999999999999999999999984 4654 379999999999983
Q ss_pred CCCCCCCCCCCcceeeeCCCCeEEEEEEEEEEEEecccCCccccccCceeeEEeeee----ccCCCCCCCCcCcceeeec
Q 018004 148 PLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGAR----QSGNLDSTNEEALDGIIGF 223 (362)
Q Consensus 148 ~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~----~~~~~~~~~~~~~~GilGL 223 (362)
.+.|.+.|++|+ +.|.+++|+|+|++.. ++ +.||++.. .++ + .....+|||||
T Consensus 193 ---------~~~f~i~YgdGs-~~G~~~~Dtv~igg~~--------v~-~~Fg~a~~t~~~~~~-f---~~~~~dGILGL 249 (451)
T 3qvc_A 193 ---------DTPVKLTSKAGT-ISGIFSKDLVTIGKLS--------VP-YKFIEMTEIVGFEPF-Y---SESDVDGVFGL 249 (451)
T ss_dssp ---------EEEEEEECSSEE-EEEEEEEEEEEETTEE--------EE-EEEEEEEEEEECTTH-H---HHSCCCEEEEC
T ss_pred ---------CCEEEEEECCCE-EEEEEEEEEEEECCEE--------EE-EEEEEEEeccccCCC-c---cCCCCCEEEec
Confidence 479999999999 6999999999998753 56 99999988 554 3 23467999999
Q ss_pred CCCCC------cHHHHhhhcCCC-CCceEEeccCC-CCcceEEeCCCCC----CCceEecCcCCCCceEEEEeEEEEcCE
Q 018004 224 GKSNS------SMISQLASSGGV-RKMFAHCLDGI-NGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQVGLD 291 (362)
Q Consensus 224 g~~~~------s~~~~l~~~~~i-~~~Fs~~l~~~-~~~G~l~fGg~d~----~~~~~~p~~~~~~~w~v~l~~i~v~~~ 291 (362)
|++.. +++++|++||+| +++||+||.+. ...|.|+|||+|+ +++.|+|+. +..+|.|.++ |+|+++
T Consensus 250 g~~~~s~~~~~~~~~~L~~qg~I~~~~FS~~L~~~~~~~G~l~fGgiD~s~y~G~l~~~pv~-~~~~w~v~l~-I~Vgg~ 327 (451)
T 3qvc_A 250 GWKDLSIGSIDPYIVELKTQNKIEQAVYSIYLPPENKNKGYLTIGGIEERFFDGPLNYEKLN-HDLMWQVDLD-VHFGNV 327 (451)
T ss_dssp SSBCSSSSCCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEECS-STTSSEEEEE-EEETTE
T ss_pred CCCcccccCCCCHHHHHHHcCCCCCCEEEEEEcCCCCCCCEEEECCcchhhcCCceEEEEcc-cCCeeEEEEE-EEECCc
Confidence 99753 689999999999 69999999986 4589999999997 458999997 5789999999 999987
Q ss_pred EeeCCCcccccCCCccEEEcccccccccChHHHHHHHHHHHHhCC
Q 018004 292 FLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQP 336 (362)
Q Consensus 292 ~~~~~~~~~~~~~~~~aiiDSGtt~~~lp~~~~~~i~~~~~~~~~ 336 (362)
. .....++|||||+++++|++++++|.+++++.+.
T Consensus 328 -~---------~~~~~aiiDSGTt~i~lP~~~~~~i~~~i~a~~~ 362 (451)
T 3qvc_A 328 -S---------SKKANVILDSATSVITVPTEFFNQFVESASVFKV 362 (451)
T ss_dssp -E---------EEEEEEEECTTBSSEEECHHHHHHHHTTTTCEEC
T ss_pred -c---------CCCceEEEeCCCccccCCHHHHHHHHHHcCCeec
Confidence 1 1245699999999999999999999999876643
No 26
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=2.8e-39 Score=313.32 Aligned_cols=237 Identities=22% Similarity=0.296 Sum_probs=188.1
Q ss_pred CcccEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCCCCCCCCCCccCCcccCCCCCccceecCCCcccCCCCCCCCCC
Q 018004 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLTD 151 (362)
Q Consensus 72 ~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~~c~~C~~~~~~~~~~~~y~~~~Sst~~~v~c~~~~C~~~~~~~~~~ 151 (362)
.+..|+++|.||||+|+++|+|||||+++||+|..| |.. ++.|||++|+|++..
T Consensus 26 ~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c--~~~-------~~~y~~~~SsT~~~~----------------- 79 (402)
T 3vf3_A 26 SGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH--PFL-------HRYYQRQLSSTYRDL----------------- 79 (402)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC--TTC-------SCCCCGGGCTTCEEE-----------------
T ss_pred CCCEEEEEEEECCCCeEEEEEEeCCCCceEEccCCC--Ccc-------cCCcCcccCcccccC-----------------
Confidence 345899999999999999999999999999999887 432 378999999999984
Q ss_pred CCCCCCCcceeeeCCCCeEEEEEEEEEEEEec-ccCCccccccCceeeEEeeeeccCCCCCCCCcCcceeeecCCCC---
Q 018004 152 CTANTSCPYLEIYGDGSSTTGYFVQDVVQYDK-VSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSN--- 227 (362)
Q Consensus 152 c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~-~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GilGLg~~~--- 227 (362)
.|.|.+.|++|+. .|.+++|+|+|++ .... ..+.|+++....+.+. ....++||||||++.
T Consensus 80 -----~~~~~i~Yg~Gs~-~G~~~~D~v~ig~~~~~~-------~~~~~~~~~~~~~~~~--~~~~~dGIlGLg~~~~s~ 144 (402)
T 3vf3_A 80 -----RKGVYVPYTQGKW-EGELGTDLVSIPHGPNVT-------VRANIAAITESDKFFI--NGSNWEGILGLAYAEIAR 144 (402)
T ss_dssp -----EEEEEEECSSCEE-EEEEEEEEEECTTSCSCE-------EEEEEEEEEEEESCSC--TTCCCCEEEECSCGGGCS
T ss_pred -----CCEEEEEECcEEE-EEEEEEEEEEECCccccc-------eeeeEEEEEccccccc--cCCCccceEEcCchhhcc
Confidence 4799999999996 9999999999984 2211 1345788777665542 235689999999864
Q ss_pred -----CcHHHHhhhcCCCCCceEEeccCC-----------CCcceEEeCCCCCC----CceEecCcCCCCceEEEEeEEE
Q 018004 228 -----SSMISQLASSGGVRKMFAHCLDGI-----------NGGGIFAIGHVVQP----EVNKTPLVPNQPHYSINMTAVQ 287 (362)
Q Consensus 228 -----~s~~~~l~~~~~i~~~Fs~~l~~~-----------~~~G~l~fGg~d~~----~~~~~p~~~~~~~w~v~l~~i~ 287 (362)
.+++++|++|++|+++||+||.+. ...|.|+|||+|+. ++.|+|+. ...+|.|.+++|+
T Consensus 145 ~~~~~~~~~~~L~~q~~i~~~FS~~l~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~w~v~l~~i~ 223 (402)
T 3vf3_A 145 PDDSLEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIR-REWYYEVIIVRVE 223 (402)
T ss_dssp SCTTSCCHHHHHHHHSCCCSCEEEEECCCC-------------EEEEESSCCGGGEEEEEEEEECS-SBTTBEECEEEEE
T ss_pred cCCcCCcHHHHHHHccCCccceEEEeecccccccccccccCCCCEEEeCCcCcccccCceEEEeCC-cCcEEEEEEeEEE
Confidence 368999999999988999999642 34799999999974 57899997 4689999999999
Q ss_pred EcCEEeeCCCcccccCCCccEEEcccccccccChHHHHHHHHHHHHhCCCCcccc---cCCcCceeecc
Q 018004 288 VGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQPDLKVHT---VHDEYTCFQYS 353 (362)
Q Consensus 288 v~~~~~~~~~~~~~~~~~~~aiiDSGtt~~~lp~~~~~~i~~~~~~~~~~~~~~~---~~~~~~C~~~~ 353 (362)
|+++.+.++...+ +...+||||||++++||++++++|+++++++........ ......|++.+
T Consensus 224 v~g~~~~~~~~~~---~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~C~~~~ 289 (402)
T 3vf3_A 224 INGQDLKMDCKEY---NYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAG 289 (402)
T ss_dssp ETTEECCCCGGGG---GSSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCTTGGGTCSCEEEETT
T ss_pred ECCEEeccccccc---CCCeEEEECCCCcccCCHHHHHHHHHHHhhhccccccCccccccccccccccc
Confidence 9999887654432 245799999999999999999999999999964221111 11135798754
No 27
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=1.5e-39 Score=313.00 Aligned_cols=252 Identities=19% Similarity=0.325 Sum_probs=187.5
Q ss_pred CCCcccEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCCCCCCCCCCccCCcccCCCCCccceecCCCcccCCCCCCCC
Q 018004 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPL 149 (362)
Q Consensus 70 ~~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~~c~~C~~~~~~~~~~~~y~~~~Sst~~~v~c~~~~C~~~~~~~~ 149 (362)
++.+.+|+++|.|||| |+|||||+++||+|..|. +++.++|.++.|........
T Consensus 10 ~~~~~~Y~~~i~iGtP-----v~~DTGSs~lWv~c~~~~---------------------~~~~~~C~s~~C~~~~~~~~ 63 (381)
T 1t6e_X 10 DPATSLYTIPFHDGAS-----LVLDVAGPLVWSTCDGGQ---------------------PPAEIPCSSPTCLLANAYPA 63 (381)
T ss_dssp CTTTCCEEEEEETTEE-----EEEETTCCCEEECCCTTC---------------------CCCCCBTTSHHHHHHHSSCC
T ss_pred cCCCcEEEEEEeCCCE-----EEEECCCCceEEeCCCCC---------------------CCCccCCCCchhccccCCCC
Confidence 3467899999999998 999999999999986541 24456676666654333222
Q ss_pred CCCCC--------CCCC-cceeeeCCCCeEEEEEEEEEEEEecccCCccccccCceeeEEeeeeccCCCCCCCCcCccee
Q 018004 150 TDCTA--------NTSC-PYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGI 220 (362)
Q Consensus 150 ~~c~~--------~~~~-~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~Gi 220 (362)
..|.. +..| .|.+.|++|+.+.|.+++|+|+|++..+.........++.|||+..+.... ....++||
T Consensus 64 ~sc~~~~~~~~~~~~~c~~f~i~YgdGs~~~G~l~~Dtv~ig~~~g~~~v~~~~~~~~Fg~~~~~~~~~---~~~~~dGI 140 (381)
T 1t6e_X 64 PGCPAPSCGSDKHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNVGVLAACAPSKLLAS---LPRGSTGV 140 (381)
T ss_dssp TTCCCCCC------CBCEECCBCTTTCCBCCEEEEEEEEEEEEESSSSEEEEEEEEEEEEECCGGGGTT---SCTTEEEE
T ss_pred CCCCCccCCcCcCCCccccccccccCCceeeEEEEEEEEEeeccCCCccccceeeeeEeecCcccccCC---CCCCCceE
Confidence 34432 2356 599999999987999999999999743211111011124789998752111 12468999
Q ss_pred eecCCCCCcHHHHhhhcCCCCCceEEeccCCCCcceEEeCCCCC------CCceEecCcCC--CCceEEEEeEEEEcCEE
Q 018004 221 IGFGKSNSSMISQLASSGGVRKMFAHCLDGINGGGIFAIGHVVQ------PEVNKTPLVPN--QPHYSINMTAVQVGLDF 292 (362)
Q Consensus 221 lGLg~~~~s~~~~l~~~~~i~~~Fs~~l~~~~~~G~l~fGg~d~------~~~~~~p~~~~--~~~w~v~l~~i~v~~~~ 292 (362)
||||++..+++.||.++++++++||+||.+. ..|+|+|||+|. +++.|+|++.+ ..+|.|.|++|+|+++.
T Consensus 141 lGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~-~~G~l~fGg~~~~~~~~~g~l~~tPl~~~~~~~~y~v~l~~i~vg~~~ 219 (381)
T 1t6e_X 141 AGLANSGLALPAQVASAQKVANRFLLCLPTG-GPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSIVVGDTR 219 (381)
T ss_dssp EECSSSTTSHHHHHHHHHTCCSEEEEECCSS-SCEEEEESCCSCSCHHHHTTCCEEECBCCTTCCSCEECEEEEEETTEE
T ss_pred EEeCCCcchhHHHHhhhcccCceEEEEeCCC-CCeeEEeCCcccccccccCcceeeccccCCCCcceEEEEEEEEEcCEE
Confidence 9999999999999999997789999999885 789999999874 46899999864 24678999999999998
Q ss_pred eeCCCcccccCCCccEEEcccccccccChHHHHHHHHHHHHhCC-------CCcc--cccCCcCceeeccC
Q 018004 293 LNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQP-------DLKV--HTVHDEYTCFQYSE 354 (362)
Q Consensus 293 ~~~~~~~~~~~~~~~aiiDSGtt~~~lp~~~~~~i~~~~~~~~~-------~~~~--~~~~~~~~C~~~~~ 354 (362)
+.++...|. .+.+||||||++++||++++++|.+++.+++. .... .....+..||+.+.
T Consensus 220 ~~~~~~~~~---~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~C~~~~~ 287 (381)
T 1t6e_X 220 VPVPEGALA---TGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKT 287 (381)
T ss_dssp CCCCTTCSC---TTCEEECSSCSSEEECHHHHHHHHHHHHHHHHHC-------CCEECCCTTCSCEEEGGG
T ss_pred ecCCHHHcc---CCCEEEECCCccEEeCHHHHHHHHHHHHHhhcccccccccccccCCCCCCCCccCCCCC
Confidence 876655443 46799999999999999999999999988763 1111 12234568998763
No 28
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=2.5e-39 Score=313.00 Aligned_cols=220 Identities=23% Similarity=0.288 Sum_probs=183.2
Q ss_pred CcccEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCCCCCCCCCCccCCcccCCCCCccceecCCCcccCCCCCCCCCC
Q 018004 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLTD 151 (362)
Q Consensus 72 ~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~~c~~C~~~~~~~~~~~~y~~~~Sst~~~v~c~~~~C~~~~~~~~~~ 151 (362)
.+..|+++|.||||+|++.|+|||||+++||+|..|..|. +.|||++|+|++.+
T Consensus 19 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~c~~~~---------~~y~~~~SsT~~~~----------------- 72 (395)
T 2qp8_A 19 SGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFLH---------RYYQRQLSSTYRDL----------------- 72 (395)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCTTCS---------CCCCGGGCTTCEEE-----------------
T ss_pred CCceEEEEEEecCCCceEEEEEecCCCceEEECCCCcccc---------CCcCcccCCCceeC-----------------
Confidence 4568999999999999999999999999999999886553 68999999999984
Q ss_pred CCCCCCCcceeeeCCCCeEEEEEEEEEEEEec-ccCCccccccCceeeEEeeeeccCCCCCCCCcCcceeeecCCCCC--
Q 018004 152 CTANTSCPYLEIYGDGSSTTGYFVQDVVQYDK-VSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS-- 228 (362)
Q Consensus 152 c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~-~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GilGLg~~~~-- 228 (362)
.|.|.+.|++|+. .|.+++|+|+|++ .... ..+.|++.....+.|. ....++||||||++..
T Consensus 73 -----~~~~~i~Yg~Gs~-~G~~~~Dtv~ig~g~~~~-------~~~~~~~~~~~~~~f~--~~~~~dGIlGLg~~~~s~ 137 (395)
T 2qp8_A 73 -----RKGVYVPYTQGKW-EGELGTDLVSIPHGPNVT-------VRANIAAITESDKFFI--NGSNWEGILGLAYAEIAR 137 (395)
T ss_dssp -----EEEEEEECSSCEE-EEEEEEEEEECTTSCSCE-------EEEEEEEEEEEESCSC--TTCCCCEEEECSCGGGCS
T ss_pred -----CceEEEEECCcEE-EEEEEeEEEEECCCCCce-------EEEEEEEEEccCcccc--cccCccceEEcCchhhcc
Confidence 3689999999986 9999999999983 3211 1366887776555442 1346899999998643
Q ss_pred ------cHHHHhhhcCCCCCceEEeccCC-----------CCcceEEeCCCCCC----CceEecCcCCCCceEEEEeEEE
Q 018004 229 ------SMISQLASSGGVRKMFAHCLDGI-----------NGGGIFAIGHVVQP----EVNKTPLVPNQPHYSINMTAVQ 287 (362)
Q Consensus 229 ------s~~~~l~~~~~i~~~Fs~~l~~~-----------~~~G~l~fGg~d~~----~~~~~p~~~~~~~w~v~l~~i~ 287 (362)
+++++|++|++|+++||+||.+. ...|.|+|||+|+. ++.|+|+. +..+|.|.+++|+
T Consensus 138 ~~~~~~~~~~~l~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~ 216 (395)
T 2qp8_A 138 PDDSLEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIR-REWYYEVIIVRVE 216 (395)
T ss_dssp SCTTSCCHHHHHHHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECC-SBTTBBCCEEEEE
T ss_pred CCCCCCCHHHHHHHccCCcceEEEEeccccccccccccccCCCcEEEECCcCcccccCceEEeccC-CCceEEEEEEEEE
Confidence 58999999999988999999752 35799999999964 58899997 4589999999999
Q ss_pred EcCEEeeCCCcccccCCCccEEEcccccccccChHHHHHHHHHHHHhCC
Q 018004 288 VGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQP 336 (362)
Q Consensus 288 v~~~~~~~~~~~~~~~~~~~aiiDSGtt~~~lp~~~~~~i~~~~~~~~~ 336 (362)
|+++.+.++...+. ...+||||||++++||++++++|++++.+++.
T Consensus 217 v~g~~~~~~~~~~~---~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~ 262 (395)
T 2qp8_A 217 INGQDLKMDCKEYN---YDKSIVDSGTTNLRLPKKVFEAAVKSIKAASS 262 (395)
T ss_dssp ETTEECCCCGGGGG---SSCEEECTTCCSEEEEHHHHHHHHHHHHHHTT
T ss_pred ECCEEcccCccccC---CceEEEEcCCCcEecCHHHHHHHHHHHhhhcc
Confidence 99998876554332 35799999999999999999999999999865
No 29
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=1.7e-40 Score=324.37 Aligned_cols=212 Identities=21% Similarity=0.370 Sum_probs=180.3
Q ss_pred CCCcccEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCC--CCCCCCCCCccCCcccCCCCCccceecCCCcccCCCCCC
Q 018004 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK--ECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGG 147 (362)
Q Consensus 70 ~~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~~c~--~C~~~~~~~~~~~~y~~~~Sst~~~v~c~~~~C~~~~~~ 147 (362)
++.+..|+++|+||||+|++.|+|||||+++||+|..|. .|. .++.|||++|+|++..
T Consensus 134 n~~~~~Y~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~~C~~~~C~-------~~~~ydps~SsT~~~~------------- 193 (453)
T 2bju_A 134 DFQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSVKCTTAGCL-------TKHLYDSSKSRTYEKD------------- 193 (453)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSTTGG-------GSCCBCGGGCTTCEEE-------------
T ss_pred ecCCCEEEEEEEECCCCeEEEEEEECCCcceEEeccCCCccccC-------CCCcCCCccCCceeEC-------------
Confidence 356789999999999999999999999999999999986 454 3479999999999984
Q ss_pred CCCCCCCCCCCcceeeeCCCCeEEEEEEEEEEEEecccCCccccccCceeeEEeeeecc--CCCCCCCCcCcceeeecCC
Q 018004 148 PLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQS--GNLDSTNEEALDGIIGFGK 225 (362)
Q Consensus 148 ~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~--~~~~~~~~~~~~GilGLg~ 225 (362)
.|.|.+.|++|+ +.|.+++|+|+|++.. ++ +.|||++... +.+. .....+||||||+
T Consensus 194 ---------~~~~~i~YgdGs-~~G~~~~Dtv~ig~~~--------v~-~~Fg~a~~~~~~g~~f--~~~~~dGIlGLg~ 252 (453)
T 2bju_A 194 ---------GTKVEMNYVSGT-VSGFFSKDLVTVGNLS--------LP-YKFIEVIDTNGFEPTY--TASTFDGILGLGW 252 (453)
T ss_dssp ---------EEEEEEECSSSE-EEEEEEEEEEEETTEE--------EE-EEEEEEEECGGGTTHH--HHSSCCEEEECSC
T ss_pred ---------CcEEEEEcCCCC-eEEEEEEEEEEEeCcE--------EE-EEEEEEEEecccCccc--cccCCceeEeccC
Confidence 479999999999 5999999999998743 56 9999999876 4321 1245899999999
Q ss_pred CCC------cHHHHhhhcCCC-CCceEEeccCC-CCcceEEeCCCCCC----CceEecCcCCCCceEEEEeEEEEcCEEe
Q 018004 226 SNS------SMISQLASSGGV-RKMFAHCLDGI-NGGGIFAIGHVVQP----EVNKTPLVPNQPHYSINMTAVQVGLDFL 293 (362)
Q Consensus 226 ~~~------s~~~~l~~~~~i-~~~Fs~~l~~~-~~~G~l~fGg~d~~----~~~~~p~~~~~~~w~v~l~~i~v~~~~~ 293 (362)
+.. +++++|++||+| +++||+||.+. ...|.|+|||+|+. ++.|+|+. ...+|.|.++ |+|++ .+
T Consensus 253 ~~~s~~~~~~~~~~L~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~G~l~~~pv~-~~~~w~V~l~-I~Vgg-~~ 329 (453)
T 2bju_A 253 KDLSIGSVDPIVVELKNQNKIENALFTFYLPVHDKHTGFLTIGGIEERFYEGPLTYEKLN-HDLYWQITLD-AHVGN-IM 329 (453)
T ss_dssp GGGSTTCCCCHHHHHHHTTSSSSCEEEEECCBTTTBCEEEEESSCCGGGEEEEEEEEEEE-EETTEEEEEE-EEETT-EE
T ss_pred CcccccCCCcHHHHHHHCCCCCCCEEEEEeCCCCCCCeEEEECCCCHHHcCCceEEEecC-CCceEEEEEE-EEECc-EE
Confidence 753 589999999999 69999999985 45899999999964 58999996 4689999999 99999 33
Q ss_pred eCCCcccccCCCccEEEcccccccccChHHHHHHHHHHHHh
Q 018004 294 NLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQ 334 (362)
Q Consensus 294 ~~~~~~~~~~~~~~aiiDSGtt~~~lp~~~~~~i~~~~~~~ 334 (362)
. ....+||||||+++++|++++++|.+++++.
T Consensus 330 -~--------~~~~aIiDSGTsl~~lP~~~~~~l~~~i~~~ 361 (453)
T 2bju_A 330 -L--------EKANCIVDSGTSAITVPTDFLNKMLQNLDVI 361 (453)
T ss_dssp -E--------EEEEEEECTTCCSEEECHHHHHHHTTTSSCE
T ss_pred -e--------ccccEEEcCCCCeEecCHHHHHHHHHHhCCc
Confidence 1 2456999999999999999999999988764
No 30
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=9.8e-40 Score=308.43 Aligned_cols=215 Identities=15% Similarity=0.198 Sum_probs=182.5
Q ss_pred CCCcccEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCC--CCCCCCCCCccCCcccCCCCCccceecCCCcccCCCCCC
Q 018004 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK--ECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGG 147 (362)
Q Consensus 70 ~~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~~c~--~C~~~~~~~~~~~~y~~~~Sst~~~v~c~~~~C~~~~~~ 147 (362)
++.+..|+++|+|| +|++.|+|||||+++||+|..|. .|.. ..++.|||++| |++..
T Consensus 13 n~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~-----~~~~~y~~~~S-T~~~~------------- 71 (330)
T 1yg9_A 13 VFINTQYAGITKIG--NQNFLTVFDSTSCNVVVASQECVGGACVC-----PNLQKYEKLKP-KYISD------------- 71 (330)
T ss_dssp EEECTTSEEEEEET--TEEEEEEEETTCCCEEEECTTCCSGGGGS-----TTCCCCCCSSC-EEEEE-------------
T ss_pred cCCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCCCccCcc-----cccCccCCCCC-ceEEC-------------
Confidence 45678999999999 89999999999999999999986 5621 23379999999 99873
Q ss_pred CCCCCCCCCCCcceeeeCCCCeEEEEEEEEEEEEecccCCccccccCceeeEEeeeeccCCCCCCCCcCcceeeecCCCC
Q 018004 148 PLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSN 227 (362)
Q Consensus 148 ~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GilGLg~~~ 227 (362)
.+.|.+.|++|+. .|.+++|+|+|++.. ++++.|||+......| ....++||||||++.
T Consensus 72 ---------~~~~~i~Yg~Gs~-~G~~~~Dtv~ig~~~--------~~~~~fg~~~~~~~~f---~~~~~~GilGLg~~~ 130 (330)
T 1yg9_A 72 ---------GNVQVKFFDTGSA-VGRGIEDSLTISQLT--------TSQQDIVLADELSQEV---CILSADVVVGIAAPG 130 (330)
T ss_dssp ---------EEEEEEETTTEEE-EEEEEEEEEEETTEE--------EEEEEEEEEEEECTHH---HHTTCSEEEECSCTT
T ss_pred ---------CCEEEEEECCceE-EEEEEEEEEEECCEE--------EcCeEEEEEEEccccc---ccccCceEEEcCcch
Confidence 4689999999987 999999999998753 5589999999873323 124579999999987
Q ss_pred Cc-------HHHHhhhcCCCCCceEEeccCC-CC--cceEEeCCCCCC----CceEecCcCCCCceEEEEeEEEEcCEEe
Q 018004 228 SS-------MISQLASSGGVRKMFAHCLDGI-NG--GGIFAIGHVVQP----EVNKTPLVPNQPHYSINMTAVQVGLDFL 293 (362)
Q Consensus 228 ~s-------~~~~l~~~~~i~~~Fs~~l~~~-~~--~G~l~fGg~d~~----~~~~~p~~~~~~~w~v~l~~i~v~~~~~ 293 (362)
.+ ++++|++||+|+++||+||.+. .. .|.|+|||+|+. ++.|+|+. +..+|.|.+++|+|+++.+
T Consensus 131 ~s~~~~~~~~~~~l~~qg~i~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~w~v~l~~i~v~~~~~ 209 (330)
T 1yg9_A 131 CPNALKGKTVLENFVEENLIAPVFSIHHARFQDGEHFGEIIFGGSDWKYVDGEFTYVPLV-GDDSWKFRLDGVKIGDTTV 209 (330)
T ss_dssp SCCTTSCCCHHHHHHHTTSSCSEEEEEEEECTTSCEEEEEEETSCCGGGEEEEEEEEEBS-CTTSCCEECSEEEETTEEE
T ss_pred hccccCCCCHHHHHHhcCCCCceEEEEEcCCCCCCCCCEEEECCcCHHHccCceEEEECC-CCCEEEEEeCeEEECCEEE
Confidence 65 9999999998899999999885 22 799999999964 58899997 6789999999999999876
Q ss_pred eCCCcccccCCCccEEEcccccccccChHHHHHHHHHHHHhC
Q 018004 294 NLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQ 335 (362)
Q Consensus 294 ~~~~~~~~~~~~~~aiiDSGtt~~~lp~~~~~~i~~~~~~~~ 335 (362)
. .....+||||||+++++|++++++|++++++..
T Consensus 210 ~--------~~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~ 243 (330)
T 1yg9_A 210 A--------PAGTQAIIDTSKAIIVGPKAYVNPINEAIGCVV 243 (330)
T ss_dssp E--------CTTCEEEECTTCSSEEEEHHHHHHHHHHHTCEE
T ss_pred c--------CCCcEEEEecCCccccCCHHHHHHHHHHhCCcc
Confidence 4 124679999999999999999999999997653
No 31
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=2.7e-39 Score=304.80 Aligned_cols=210 Identities=21% Similarity=0.331 Sum_probs=177.2
Q ss_pred CcccEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCCCCCCCCCCccCCcccCCCCCccceecCCCcccCCCCCCCCCC
Q 018004 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLTD 151 (362)
Q Consensus 72 ~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~~c~~C~~~~~~~~~~~~y~~~~Sst~~~v~c~~~~C~~~~~~~~~~ 151 (362)
.+..|+++|.|| +|++.|+|||||+++||+|..|..|.. ..++.|||++|+ ++.
T Consensus 12 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~c-----~~~~~y~~~~Ss-~~~------------------ 65 (325)
T 1ibq_A 12 NDEEYLTPVTVG--KSTLHLDFDTGSADLWVFSDELPSSEQ-----TGHDLYTPSSSA-TKL------------------ 65 (325)
T ss_dssp TTSCEEEEEEEB--TEEEEEEEETTCCCEEEECTTSCHHHH-----TTSCCCBCCSSC-EEC------------------
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCccceEeeCCCCcccc-----CCCCCCCchhcC-Ccc------------------
Confidence 577899999999 899999999999999999999987642 234799999998 443
Q ss_pred CCCCCCCcceeeeCCCCeEEEEEEEEEEEEecccCCccccccCceeeEEeeeeccCCCCCCCCcCcceeeecCCCCC---
Q 018004 152 CTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS--- 228 (362)
Q Consensus 152 c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GilGLg~~~~--- 228 (362)
+.|.|.+.|++|+.+.|.+++|+|+|++.. ++++.|||+...++.+. .....+||||||++..
T Consensus 66 ----~~~~~~i~Yg~Gs~~~G~~~~D~v~ig~~~--------v~~~~fg~~~~~~~~~~--~~~~~~GilGLg~~~~s~~ 131 (325)
T 1ibq_A 66 ----SGYSWDISYGDGSSASGDVYRDTVTVGGVT--------TNKQAVEAASKISSEFV--QDTANDGLLGLAFSSINTV 131 (325)
T ss_dssp ----TTCBEEEECSSSCEEEEEEEEEEEEETTEE--------EEEEEEEEEEEECHHHH--TSTTCCEEEECSCGGGCCC
T ss_pred ----CCCEEEEEeCCCCEEEEEEEEeEEEECCEE--------EcceEEEEEEecCcccc--ccCCCceEEEeCccccccc
Confidence 358999999999977999999999998754 55899999998755432 1246899999999653
Q ss_pred ------cHHHHhhhcCCC-CCceEEeccCCCCcceEEeCCCCC----CCceEecCcCCCCceEEEEeEEEEcCEEeeCCC
Q 018004 229 ------SMISQLASSGGV-RKMFAHCLDGINGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQVGLDFLNLPT 297 (362)
Q Consensus 229 ------s~~~~l~~~~~i-~~~Fs~~l~~~~~~G~l~fGg~d~----~~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~ 297 (362)
+++++|+++ | +++||+||.+ +..|.|+|||+|+ +++.|+|+.++..+|.|.+++|+|+++.+.
T Consensus 132 ~p~~~~~~~~~l~~~--i~~~~FS~~l~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~~~~~--- 205 (325)
T 1ibq_A 132 QPKAQTTFFDTVKSQ--LDSPLFAVQLKH-DAPGVYDFGYIDDSKYTGSITYTDADSSQGYWGFSTDGYSIGDGSSS--- 205 (325)
T ss_dssp BSSCCCCHHHHHGGG--SSSSEEEEEEET-TEEEEEEESSCCGGGBSSCCEEEECBCTTSSCEEEECEEEETTSCCB---
T ss_pred CcCCCCCHHHHHHHh--cCCcEEEEEecC-CCCceEEECCcChhhccCceEEEEcCCCCceEEEEECcEEECCeecc---
Confidence 478999987 6 7999999998 4689999999995 568999998667899999999999987653
Q ss_pred cccccCCCccEEEcccccccccChHHHHHHHHHHH
Q 018004 298 DVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKII 332 (362)
Q Consensus 298 ~~~~~~~~~~aiiDSGtt~~~lp~~~~~~i~~~~~ 332 (362)
.....+||||||+++++|++++++|++++.
T Consensus 206 -----~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~ 235 (325)
T 1ibq_A 206 -----SSGFSAIADTGTTLILLDDEIVSAYYEQVS 235 (325)
T ss_dssp -----SCCEEEEECTTCCSEEECHHHHHHHHTTST
T ss_pred -----CCCceEEEeCCCCcEeCCHHHHHHHHHhCC
Confidence 234679999999999999999999999883
No 32
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=9.1e-39 Score=300.94 Aligned_cols=210 Identities=23% Similarity=0.335 Sum_probs=175.4
Q ss_pred CcccEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCCCCCCCCCCccCCcccCCCCCccceecCCCcccCCCCCCCCCC
Q 018004 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLTD 151 (362)
Q Consensus 72 ~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~~c~~C~~~~~~~~~~~~y~~~~Sst~~~v~c~~~~C~~~~~~~~~~ 151 (362)
.+..|+++|.|| +|+++|+|||||+++||+|..|..|. |..++.|||++|+ ++.
T Consensus 13 ~~~~Y~~~i~iG--~q~~~v~~DTGSs~lWv~~~~C~~~~-----c~~~~~y~~~~Ss-~~~------------------ 66 (323)
T 1izd_A 13 NDEEYITQVTVG--DDTLGLDFDTGSADLWVFSSQTPSSE-----RSGHDYYTPGSSA-QKI------------------ 66 (323)
T ss_dssp GGCCEEEEEEET--TEEEEEEEETTCCCEEECBTTSCHHH-----HTTCCCBCCCTTC-EEE------------------
T ss_pred CCCEEEEEEEEC--CEEEEEEEcCCCcceEEecCCCCccc-----ccCCCCCCccccC-Ccc------------------
Confidence 567899999999 89999999999999999999998663 2234789999998 553
Q ss_pred CCCCCCCcceeeeCCCCeEEEEEEEEEEEEecccCCccccccCceeeEEeeeeccCCCCCCCCcCcceeeecCCCCC---
Q 018004 152 CTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS--- 228 (362)
Q Consensus 152 c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GilGLg~~~~--- 228 (362)
+.|.|.+.|++|+.+.|.+++|+|+|++.. ++++.|||++..++.+. .....+||||||++..
T Consensus 67 ----~~~~~~i~Yg~Gs~~~G~~~~D~v~ig~~~--------v~~~~fg~~~~~~~~~~--~~~~~~GilGLg~~~~s~~ 132 (323)
T 1izd_A 67 ----DGATWSISYGDGSSASGDVYKDKVTVGGVS--------YDSQAVESAEKVSSEFT--QDTANDGLLGLAFSSINTV 132 (323)
T ss_dssp ----EEEEEEEECTTSCEEEEEEEEEEEEETTEE--------EEEEEEEEEEEECHHHH--HCTTCCEEEECSCGGGCCC
T ss_pred ----CCCeEEEEcCCCCeEEEEEEEEEEEECCEE--------ECceEEEEEEecccccc--ccCCCceEEecCccccccc
Confidence 357999999999977999999999998754 55899999998755332 1235799999999643
Q ss_pred ------cHHHHhhhcCCCCCceEEeccCCCCcceEEeCCCCCC----CceEecCcCCCCceEEEEeEEEEcCEEeeCCCc
Q 018004 229 ------SMISQLASSGGVRKMFAHCLDGINGGGIFAIGHVVQP----EVNKTPLVPNQPHYSINMTAVQVGLDFLNLPTD 298 (362)
Q Consensus 229 ------s~~~~l~~~~~i~~~Fs~~l~~~~~~G~l~fGg~d~~----~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~~ 298 (362)
+++++|+++ +-+++||+||.+ +..|.|+|||+|+. ++.|+|+.++..+|.|.+++|+|++ .+.
T Consensus 133 ~p~~~~~~~~~l~~~-i~~~~FS~~L~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~-~~~---- 205 (323)
T 1izd_A 133 QPTPQKTFFDNVKSS-LSEPIFAVALKH-NAPGVYDFGYTDSSKYTGSITYTDVDNSQGFWGFTADGYSIGS-DSS---- 205 (323)
T ss_dssp BSSCCCCHHHHHGGG-SSSSEEEEECCT-TSCEEEEESSCCTTSEEEEEEEEECBCTTSSCEEEESEEEETT-EEE----
T ss_pred CCCCCCCHHHHHHHh-ccCcEEEEEccC-CCCCEEEECCcCccccccceEEEECCCCCceEEEEECeEEECC-ccc----
Confidence 478999987 337999999988 46899999999975 4789999866789999999999999 442
Q ss_pred ccccCCCccEEEcccccccccChHHHHHHHHHHH
Q 018004 299 VFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKII 332 (362)
Q Consensus 299 ~~~~~~~~~aiiDSGtt~~~lp~~~~~~i~~~~~ 332 (362)
.....+||||||+++++|++++++|.+++.
T Consensus 206 ----~~~~~aiiDSGTs~~~lp~~~~~~i~~~i~ 235 (323)
T 1izd_A 206 ----SDSITGIADTGTTLLLLDDSIVDAYYEQVN 235 (323)
T ss_dssp ----CCCEEEEECTTCCSEEECHHHHHHHHTTST
T ss_pred ----CCCceEEEeCCCcceeCCHHHHHHHHHhCC
Confidence 234679999999999999999999998874
No 33
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=1.3e-38 Score=299.97 Aligned_cols=208 Identities=23% Similarity=0.366 Sum_probs=174.8
Q ss_pred CcccEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCCCCCCCCCCccCCcccCCCCCccceecCCCcccCCCCCCCCCC
Q 018004 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLTD 151 (362)
Q Consensus 72 ~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~~c~~C~~~~~~~~~~~~y~~~~Sst~~~v~c~~~~C~~~~~~~~~~ 151 (362)
.+..|+++|+|| +|++.|+|||||+++||+|..|..|.. ..++.|||++|+ ++.
T Consensus 13 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~c-----~~~~~y~~~~Ss-~~~------------------ 66 (323)
T 1bxo_A 13 NDEEYITPVTIG--GTTLNLNFDTGSADLWVFSTELPASQQ-----SGHSVYNPSATG-KEL------------------ 66 (323)
T ss_dssp GGSCEEEEEEET--TEEEEEEEETTCCCEEECBTTSCHHHH-----TTSCCBCHHHHC-EEE------------------
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCCchhc-----cCCCCCCcccCC-ccc------------------
Confidence 567899999999 899999999999999999999987642 234799999988 553
Q ss_pred CCCCCCCcceeeeCCCCeEEEEEEEEEEEEecccCCccccccCceeeEEeeeeccCCCCCCCCcCcceeeecCCCCC---
Q 018004 152 CTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS--- 228 (362)
Q Consensus 152 c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GilGLg~~~~--- 228 (362)
+.|.|.+.|++|+.+.|.+++|+|+|++.. ++++.|||++..++.+. .....+||||||++..
T Consensus 67 ----~~~~~~i~Yg~Gs~~~G~~~~D~v~ig~~~--------v~~~~fg~~~~~~~~~~--~~~~~~GilGLg~~~~s~~ 132 (323)
T 1bxo_A 67 ----SGYTWSISYGDGSSASGNVFTDSVTVGGVT--------AHGQAVQAAQQISAQFQ--QDTNNDGLLGLAFSSINTV 132 (323)
T ss_dssp ----EEEEEEEECTTSCEEEEEEEEEEEEETTEE--------EEEEEEEEEEEECHHHH--TCTTCSEEEECSCGGGCCC
T ss_pred ----CCCeEEEEeCCCCeEEEEEEEEEEEECCEE--------ECcEEEEEEEecCcccc--cCCCCceEEEeCccccccc
Confidence 357999999999977999999999998754 55899999998755432 1245799999998643
Q ss_pred ------cHHHHhhhcCCC-CCceEEeccCCCCcceEEeCCCCC----CCceEecCcCCCCceEEEEeEEEEcCEEeeCCC
Q 018004 229 ------SMISQLASSGGV-RKMFAHCLDGINGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQVGLDFLNLPT 297 (362)
Q Consensus 229 ------s~~~~l~~~~~i-~~~Fs~~l~~~~~~G~l~fGg~d~----~~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~ 297 (362)
+++++|+++ | +++||+||.+ +..|.|+|||+|+ +++.|+|+.++..+|.|.+++|+|++ ..
T Consensus 133 ~~~~~~~~~~~l~~~--i~~~~FS~~L~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~-~~---- 204 (323)
T 1bxo_A 133 QPQSQTTFFDTVKSS--LAQPLFAVALKH-QQPGVYDFGFIDSSKYTGSLTYTGVDNSQGFWSFNVDSYTAGS-QS---- 204 (323)
T ss_dssp BSSCCCCHHHHHGGG--BSSSEEEEECCS-SSCEEEEESSCCGGGBSSCCEEEECBCTTSSCEEEEEEEEETT-EE----
T ss_pred ccCCCCCHHHHHHHh--cCCcEEEEEEeC-CCCceEEEeCcChhhccCceEEEECCCCCCeEEEEEeeEEECC-cc----
Confidence 488999987 6 7999999987 4689999999995 56899999867789999999999998 21
Q ss_pred cccccCCCccEEEcccccccccChHHHHHHHHHHH
Q 018004 298 DVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKII 332 (362)
Q Consensus 298 ~~~~~~~~~~aiiDSGtt~~~lp~~~~~~i~~~~~ 332 (362)
.....+||||||+++++|++++++|++++.
T Consensus 205 -----~~~~~aiiDSGTs~~~lP~~~~~~l~~~i~ 234 (323)
T 1bxo_A 205 -----GDGFSGIADTGTTLLLLDDSVVSQYYSQVS 234 (323)
T ss_dssp -----EEEEEEEECTTCSSEEECHHHHHHHHTTST
T ss_pred -----CCCceEEEeCCCCceeCCHHHHHHHHHhCC
Confidence 123569999999999999999999999873
No 34
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=1.3e-37 Score=295.13 Aligned_cols=200 Identities=24% Similarity=0.403 Sum_probs=170.5
Q ss_pred cccEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCCCCCCCCCCCccCCcccCCCCCccceecCCCcccCCCCCCCCCCC
Q 018004 73 VGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLTDC 152 (362)
Q Consensus 73 ~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~~c~~C~~~~~~~~~~~~y~~~~Sst~~~v~c~~~~C~~~~~~~~~~c 152 (362)
+..|+++|.||||+|++.|+|||||+++||+|. +.|+|++|+++..
T Consensus 11 ~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~---------------~~y~~s~Ss~~~~------------------- 56 (340)
T 1wkr_A 11 LVDYVVNVGVGSPATTYSLLVDTGSSNTWLGAD---------------KSYVKTSTSSATS------------------- 56 (340)
T ss_dssp SSCEEEEEEETTTTEEEEEEEETTCCCCEECSS---------------SCCCCCTTCEEEE-------------------
T ss_pred CcEEEEEEEECCCCcEEEEEEeCCChhheecCC---------------CccCCcCCccccC-------------------
Confidence 468999999999999999999999999999863 4799988876543
Q ss_pred CCCCCCcceeeeCCCCeEEEEEEEEEEEEecccCCccccccCceeeEEeeeeccCCCCCCCCcCcceeeecCCCCC----
Q 018004 153 TANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS---- 228 (362)
Q Consensus 153 ~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GilGLg~~~~---- 228 (362)
|.|.+.|++|+ +.|.+++|+|+|++.. ++++.|||+....+ |. .++||||||++..
T Consensus 57 -----~~~~i~Yg~Gs-~~G~~~~Dtv~~g~~~--------v~~~~fg~~~~~~~-~~-----~~~GilGLg~~~~s~~~ 116 (340)
T 1wkr_A 57 -----DKVSVTYGSGS-FSGTEYTDTVTLGSLT--------IPKQSIGVASRDSG-FD-----GVDGILGVGPVDLTVGT 116 (340)
T ss_dssp -----EEEEEECSSCE-EEEEEEEEEEEETTEE--------EEEEEEEEEEEEES-CT-----TCSEEEECSCGGGGTTS
T ss_pred -----ceEEEEECCcE-EEEEEEEEEEEECCEE--------EcceEEEEEEccCC-Cc-----CCCcEEECCcccccccc
Confidence 78999999998 5999999999998753 56899999998765 32 4899999998653
Q ss_pred ----------cHHHHhhhcCCC-CCceEEeccCC----CCcceEEeCCCCC----CCceEecCcCC---CCceEEEEeEE
Q 018004 229 ----------SMISQLASSGGV-RKMFAHCLDGI----NGGGIFAIGHVVQ----PEVNKTPLVPN---QPHYSINMTAV 286 (362)
Q Consensus 229 ----------s~~~~l~~~~~i-~~~Fs~~l~~~----~~~G~l~fGg~d~----~~~~~~p~~~~---~~~w~v~l~~i 286 (362)
+++++|++||+| +++||+||.+. ...|.|+|||+|+ +++.|+|+..+ ..+|.|. .+|
T Consensus 117 ~~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~w~v~-~~i 195 (340)
T 1wkr_A 117 LSPHTSTSIPTVTDNLFSQGTIPTNLLAVSFEPTTSESSTNGELTFGATDSSKYTGSITYTPITSTSPASAYWGIN-QSI 195 (340)
T ss_dssp EESCTTCCCCCHHHHHHHTTSSSSSEEEEECCCCSSSSEEEEEEEESSCCGGGCSSCCEEEECCSSTTGGGSSEEE-EEE
T ss_pred ccccccccCCCHHHHHHHcCCCCCCEEEEEecCCCCCCCCCcEEEEcccChhhcccceEEEECccCCCCcceEEEE-eeE
Confidence 579999999999 69999999863 3479999999995 57899999864 5799999 999
Q ss_pred EEcC-EEeeCCCcccccCCCccEEEcccccccccChHHHHHHHHHHHHhCC
Q 018004 287 QVGL-DFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQP 336 (362)
Q Consensus 287 ~v~~-~~~~~~~~~~~~~~~~~aiiDSGtt~~~lp~~~~~~i~~~~~~~~~ 336 (362)
+|++ +.+.. ...+||||||++++||++++++|.+++++++.
T Consensus 196 ~v~~~~~l~~---------~~~aiiDSGTt~~~lP~~~~~~l~~~~~a~~~ 237 (340)
T 1wkr_A 196 RYGSSTSILS---------STAGIVDTGTTLTLIASDAFAKYKKATGAVAD 237 (340)
T ss_dssp EETTTEEEEE---------EEEEEECTTBCSEEECHHHHHHHHHHHTCEEC
T ss_pred EECCCeEccC---------CCeEEEeCCcccccCCHHHHHHHHHhhCCEEc
Confidence 9998 76641 24699999999999999999999999887653
No 35
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.87 E-value=7.7e-23 Score=157.39 Aligned_cols=84 Identities=39% Similarity=0.590 Sum_probs=74.9
Q ss_pred CCCcccEEEEEEeCCCCceEEEEEEcCCCeeeEeCCCCC----CCCCCCCCCccCCcccCCCCCccceecCCCcccCCCC
Q 018004 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK----ECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVY 145 (362)
Q Consensus 70 ~~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~~c~----~C~~~~~~~~~~~~y~~~~Sst~~~v~c~~~~C~~~~ 145 (362)
++.+..|+++|.||||+|+|.|+|||||+++||+|..|. .|.. ++.|||++|+|++..
T Consensus 9 n~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~C~~-------~~~y~p~~SsT~~~~----------- 70 (97)
T 1lya_A 9 NYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWI-------HHKYNSDKSSTYVKN----------- 70 (97)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCTTCHHHHT-------SCCBCGGGCTTCEEE-----------
T ss_pred ECCCCeEEEEEEECCCCeEEEEEEeCCCCceEEeEcCccCcccccCC-------CCCCCchhCCCceeC-----------
Confidence 346789999999999999999999999999999999886 4543 479999999999984
Q ss_pred CCCCCCCCCCCCCcceeeeCCCCeEEEEEEEEEEEEec
Q 018004 146 GGPLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDK 183 (362)
Q Consensus 146 ~~~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~ 183 (362)
.|.|.+.|++|+ +.|.+++|+|.|++
T Consensus 71 -----------~~~~~i~Yg~Gs-~~G~~~~Dtv~i~g 96 (97)
T 1lya_A 71 -----------GTSFDIHYGSGS-LSGYLSQDTVSVPC 96 (97)
T ss_dssp -----------EEEEEEECSSCE-EEEEEEEEEEEESC
T ss_pred -----------CCcEEEEECCcE-EEEEEEEEEEEECC
Confidence 479999999999 59999999999975
No 36
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=99.85 E-value=4.4e-21 Score=172.67 Aligned_cols=132 Identities=19% Similarity=0.274 Sum_probs=110.2
Q ss_pred CceeeEEeeeeccCCCCCCCCcCcceeeecCCCCC------cHHHHhhhcCCC-CCceEEeccCCC-C--cceEEeCCCC
Q 018004 194 NGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS------SMISQLASSGGV-RKMFAHCLDGIN-G--GGIFAIGHVV 263 (362)
Q Consensus 194 ~~~~~fg~~~~~~~~~~~~~~~~~~GilGLg~~~~------s~~~~l~~~~~i-~~~Fs~~l~~~~-~--~G~l~fGg~d 263 (362)
++++.|||++..++.+. ....++||||||++.. +++++|++||+| +++||+||.+.. . .|.|+|||+|
T Consensus 5 v~~~~Fg~~~~~~~~~f--~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d 82 (241)
T 1lya_B 5 VERQVFGEATKQPGITF--IAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGGTD 82 (241)
T ss_dssp EEEEEEEEEEECCSSTT--TSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTCSSCEEEEETSCC
T ss_pred ECCeEEEEEEEccCCcc--ccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCCCCCcEEEECCcC
Confidence 56899999998766432 2457899999999754 589999999999 699999999862 2 7999999999
Q ss_pred CC----CceEecCcCCCCceEEEEeEEEEcCEEeeCCCcccccCCCccEEEcccccccccChHHHHHHHHHHHHhC
Q 018004 264 QP----EVNKTPLVPNQPHYSINMTAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQ 335 (362)
Q Consensus 264 ~~----~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~aiiDSGtt~~~lp~~~~~~i~~~~~~~~ 335 (362)
+. ++.|+|+. +..+|.|.+++|+|+++.+. ......+||||||+++++|++++++|.++++++.
T Consensus 83 ~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~~~~-------~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~ 150 (241)
T 1lya_B 83 SKYYKGSLSYLNVT-RKAYWQVHLDQVEVASGLTL-------CKEGCEAIVDTGTSLMVGPVDEVRELQKAIGAVP 150 (241)
T ss_dssp GGGEEEEEEEEECS-SBTTBEEEEEEEEETTSCEE-------STTCEEEEECTTCSSEEECHHHHHHHHHHHTCEE
T ss_pred HHHcCCceEEEECc-cccEEEEEEeEEEECCeeEe-------ccCCCEEEEECCCccccCCHHHHHHHHHHhCCee
Confidence 74 58899997 56899999999999987642 1235679999999999999999999999997653
No 37
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=87.61 E-value=0.68 Score=34.56 Aligned_cols=28 Identities=25% Similarity=0.266 Sum_probs=25.0
Q ss_pred EEEEEeCCCCceEEEEEEcCCCeeeEeCCC
Q 018004 77 YAKIGIGTPPKDYYVQVDTGSDIMWVNCIQ 106 (362)
Q Consensus 77 ~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~~ 106 (362)
++.+.|| .|.+++++|||.+++-+...+
T Consensus 10 ~vtvkI~--Gq~~eaLLDTGAD~TVl~~~~ 37 (99)
T 2hs1_A 10 LVTIKIG--GQLKEALLDTGADDTIIEEMS 37 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSEEESCCS
T ss_pred EEEEEEC--CEEEEEEeccCCCcEEEeccc
Confidence 6789999 999999999999999997644
No 38
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=85.77 E-value=0.77 Score=34.61 Aligned_cols=27 Identities=22% Similarity=0.179 Sum_probs=24.3
Q ss_pred EEEEEEeCCCCceEEEEEEcCCCeeeEeC
Q 018004 76 YYAKIGIGTPPKDYYVQVDTGSDIMWVNC 104 (362)
Q Consensus 76 Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~ 104 (362)
-++.+.|| +|.+++++|||.+++-+..
T Consensus 9 P~v~v~I~--Gq~~e~LLDTGAD~TVl~~ 35 (104)
T 1fmb_A 9 PTTIVLIN--DTPLNVLLDTGADTSVLTT 35 (104)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEEEH
T ss_pred CEEEEEEC--CEEEEEEeccCCCcEEEcc
Confidence 46889999 9999999999999999873
No 39
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=84.92 E-value=1.1 Score=33.34 Aligned_cols=28 Identities=29% Similarity=0.191 Sum_probs=24.8
Q ss_pred EEEEEeCCCCceEEEEEEcCCCeeeEeCCC
Q 018004 77 YAKIGIGTPPKDYYVQVDTGSDIMWVNCIQ 106 (362)
Q Consensus 77 ~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~~ 106 (362)
++.+.|| +|.+++++|||.+++-+...+
T Consensus 10 ~vti~I~--Gq~~e~LLDTGAD~TVl~~~~ 37 (99)
T 3ec0_A 10 VVTAYIE--GQPVEVLLDTGADDSIVAGIE 37 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEESSCC
T ss_pred eEEEEEC--CEEEEEEEecCCCceEEcCcc
Confidence 6789999 999999999999999996544
No 40
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=84.29 E-value=0.89 Score=36.33 Aligned_cols=31 Identities=26% Similarity=0.300 Sum_probs=27.4
Q ss_pred CcccEEEEEEeCCCCceEEEEEEcCCCeeeEeC
Q 018004 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNC 104 (362)
Q Consensus 72 ~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~ 104 (362)
..+.+++++.|+ ++++.+++|||++.+-+..
T Consensus 23 ~~~~~~v~v~In--G~~~~~LvDTGAs~s~is~ 53 (148)
T 2i1a_A 23 QVPMLYINIEIN--NYPVKAFVDTGAQTTIMST 53 (148)
T ss_dssp CCCCCEEEEEET--TEEEEEEECTTCSSCEEEH
T ss_pred ccceEEEEEEEC--CEEEEEEEECCCCccccCH
Confidence 456789999999 8999999999999988864
No 41
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=81.03 E-value=1.2 Score=35.93 Aligned_cols=29 Identities=21% Similarity=0.312 Sum_probs=25.4
Q ss_pred EEEcCEEeeCCCcccccCCCccEEEcccccccccChHHHHHH
Q 018004 286 VQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPL 327 (362)
Q Consensus 286 i~v~~~~~~~~~~~~~~~~~~~aiiDSGtt~~~lp~~~~~~i 327 (362)
++|||+.+. +++|||++.+.++.+..+++
T Consensus 29 ~~Ing~~v~-------------~LVDTGAs~s~Is~~~A~rl 57 (148)
T 3s8i_A 29 CKVNGHPLK-------------AFVDSGAQMTIMSQACAERC 57 (148)
T ss_dssp EEETTEEEE-------------EEECTTCSSCEEEHHHHHHT
T ss_pred EEECCEEEE-------------EEEeCCCCcEeeCHHHHHHc
Confidence 557888775 99999999999999998876
No 42
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=80.65 E-value=1.7 Score=34.59 Aligned_cols=29 Identities=7% Similarity=0.212 Sum_probs=24.8
Q ss_pred EEEcCEEeeCCCcccccCCCccEEEcccccccccChHHHHHH
Q 018004 286 VQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPL 327 (362)
Q Consensus 286 i~v~~~~~~~~~~~~~~~~~~~aiiDSGtt~~~lp~~~~~~i 327 (362)
+.|+|+.+. ++||||++.+.++.+..+++
T Consensus 31 v~InG~~~~-------------~LvDTGAs~s~is~~~a~~l 59 (148)
T 2i1a_A 31 IEINNYPVK-------------AFVDTGAQTTIMSTRLAKKT 59 (148)
T ss_dssp EEETTEEEE-------------EEECTTCSSCEEEHHHHHHH
T ss_pred EEECCEEEE-------------EEEECCCCccccCHHHHHHc
Confidence 678888765 89999999999998887765
No 43
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=78.80 E-value=1.7 Score=33.15 Aligned_cols=31 Identities=23% Similarity=0.298 Sum_probs=25.9
Q ss_pred EEEEEeC---CCCceEEEEEEcCCCeeeEeCCCC
Q 018004 77 YAKIGIG---TPPKDYYVQVDTGSDIMWVNCIQC 107 (362)
Q Consensus 77 ~~~i~vG---tP~q~~~v~~DTGSs~~Wv~~~~c 107 (362)
.+.|.|| +|+|.+..++|||-+++-+...++
T Consensus 12 lvtikI~~~~~~Gq~~eaLLDTGADdTVl~~~~l 45 (116)
T 3liy_A 12 VIKAQVDTQTSHPKTIEALLDTGADMTVIPIALF 45 (116)
T ss_dssp EEEEEEECSSSCCEEEEEEECTTBSSCEEEGGGS
T ss_pred eEEEEEccccCCCeEeEEEeccCCCccEEecccC
Confidence 4566666 789999999999999999987654
No 44
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=77.64 E-value=1.9 Score=34.60 Aligned_cols=32 Identities=16% Similarity=0.257 Sum_probs=27.5
Q ss_pred CcccEEEEEEeCCCCceEEEEEEcCCCeeeEeCC
Q 018004 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCI 105 (362)
Q Consensus 72 ~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~ 105 (362)
....|++++.|. ++++++++|||++.+.+...
T Consensus 21 ~~~~l~v~~~In--g~~v~~LVDTGAs~s~Is~~ 52 (148)
T 3s8i_A 21 QVTMLYINCKVN--GHPLKAFVDSGAQMTIMSQA 52 (148)
T ss_dssp -CCCCEEEEEET--TEEEEEEECTTCSSCEEEHH
T ss_pred ccCEEEEEEEEC--CEEEEEEEeCCCCcEeeCHH
Confidence 345789999999 99999999999999998763
No 45
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=77.24 E-value=2.2 Score=32.79 Aligned_cols=26 Identities=27% Similarity=0.189 Sum_probs=23.2
Q ss_pred EEEEEEeCCCCceEEEEEEcCCCeeeEeC
Q 018004 76 YYAKIGIGTPPKDYYVQVDTGSDIMWVNC 104 (362)
Q Consensus 76 Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~ 104 (362)
=++ +.|| +|.+++++|||.+++-+..
T Consensus 15 P~v-ikI~--Gq~~eaLLDTGAD~TVi~~ 40 (116)
T 2hah_A 15 EIL-IFVN--GYPIKFLLDTGADITVLNR 40 (116)
T ss_dssp EEE-EEET--TEEEEEEECTTCSSCEEEG
T ss_pred CEE-EEEC--CEEEEEEecCCCCcEEEcc
Confidence 355 9999 9999999999999998875
No 46
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=74.27 E-value=3 Score=31.82 Aligned_cols=30 Identities=13% Similarity=0.156 Sum_probs=26.1
Q ss_pred EEEEEEeCCCCceEEEEEEcCCCeeeEeCCCC
Q 018004 76 YYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQC 107 (362)
Q Consensus 76 Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~~c 107 (362)
=.+.+.|| +|.++.++|||-+++-+...+.
T Consensus 10 P~vti~I~--Gq~~eaLLDTGADdTVi~~~~l 39 (114)
T 3sqf_A 10 PSLTLWLD--DKMFTGLINTGADVTIIKLEDW 39 (114)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEEEGGGS
T ss_pred CeEEEEEC--CEEEEEEEccCCCceEEecccC
Confidence 36789999 9999999999999999986554
No 47
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=70.17 E-value=5.3 Score=31.36 Aligned_cols=32 Identities=16% Similarity=0.046 Sum_probs=27.1
Q ss_pred cccEEEEEEeCCCCceEEEEEEcCCCeeeEeCCC
Q 018004 73 VGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQ 106 (362)
Q Consensus 73 ~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~~ 106 (362)
...-++.+.|+ +|.+.+++|||.+++-+...+
T Consensus 20 ~~RP~v~i~I~--G~~~~~LlDTGAd~tVl~~~~ 51 (132)
T 3slz_A 20 PPEPRITLKVG--GQPVTFLVDTGAQHSVLTQNP 51 (132)
T ss_dssp CCSSEEEEEET--TEEEEEEECTTCSSCEECSCC
T ss_pred cCCCEEEEEEC--CEEEEEEEeCCCCeEEEcccc
Confidence 34568889999 999999999999999997644
No 48
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=61.81 E-value=7.8 Score=29.99 Aligned_cols=24 Identities=17% Similarity=0.128 Sum_probs=20.3
Q ss_pred eCCCCceEEEEEEcCCCeeeEeCCCC
Q 018004 82 IGTPPKDYYVQVDTGSDIMWVNCIQC 107 (362)
Q Consensus 82 vGtP~q~~~v~~DTGSs~~Wv~~~~c 107 (362)
|| +|.++.++|||-+++-+...+.
T Consensus 27 i~--gq~~eaLLDTGAD~TVl~~~~l 50 (124)
T 2rsp_A 27 QR--SVYITALLDSGADITIISEEDW 50 (124)
T ss_dssp CS--EEEEEEEECTTCSSCEEETTTS
T ss_pred CC--CEEEEEEecCCCCcEEEecccC
Confidence 66 7888999999999999986553
No 49
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=61.48 E-value=6.4 Score=28.89 Aligned_cols=16 Identities=19% Similarity=0.623 Sum_probs=14.3
Q ss_pred EEEcccccccccChHH
Q 018004 308 TIIDSGTTLAYLPEMV 323 (362)
Q Consensus 308 aiiDSGtt~~~lp~~~ 323 (362)
++||||++.+++|...
T Consensus 30 v~~DTGSs~lWv~~~~ 45 (97)
T 1lya_A 30 VVFDTGSSNLWVPSIH 45 (97)
T ss_dssp EEEETTCCCEEEEBTT
T ss_pred EEEeCCCCceEEeEcC
Confidence 9999999999998753
No 50
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=59.48 E-value=10 Score=32.06 Aligned_cols=28 Identities=25% Similarity=0.222 Sum_probs=24.8
Q ss_pred EEEEEEeCCCCceEEEEEEcCCCeeeEeCC
Q 018004 76 YYAKIGIGTPPKDYYVQVDTGSDIMWVNCI 105 (362)
Q Consensus 76 Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~ 105 (362)
-.+.+.|| +|.+++++|||.+++-+...
T Consensus 9 P~vtv~I~--Gq~~e~LLDTGAD~TVl~~~ 36 (203)
T 3ka2_A 9 PLVTIRIG--GQLKEALLDTGADDTVIEEL 36 (203)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEECSC
T ss_pred CeEEEEEC--CEEEEEEEecCCCceEEecc
Confidence 47889999 99999999999999998643
No 51
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=46.54 E-value=11 Score=27.93 Aligned_cols=30 Identities=13% Similarity=0.416 Sum_probs=24.1
Q ss_pred eEEEEeEEEEcCEEeeCCCcccccCCCccEEEcccccccccCh
Q 018004 279 YSINMTAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPE 321 (362)
Q Consensus 279 w~v~l~~i~v~~~~~~~~~~~~~~~~~~~aiiDSGtt~~~lp~ 321 (362)
|+=.+-.++|+|+.+. +++|||+-.+.+..
T Consensus 6 ~~rP~vtvkI~Gq~~e-------------aLLDTGAD~TVl~~ 35 (99)
T 2hs1_A 6 WKRPLVTIKIGGQLKE-------------ALLDTGADDTIIEE 35 (99)
T ss_dssp SSCCEEEEEETTEEEE-------------EEECTTCSSEEESC
T ss_pred cCCCEEEEEECCEEEE-------------EEeccCCCcEEEec
Confidence 4445566899998775 99999999998875
No 52
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=46.29 E-value=12 Score=28.01 Aligned_cols=33 Identities=24% Similarity=0.277 Sum_probs=26.1
Q ss_pred eEEEEeEEEEcCEEeeCCCcccccCCCccEEEcccccccccChHHH
Q 018004 279 YSINMTAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVY 324 (362)
Q Consensus 279 w~v~l~~i~v~~~~~~~~~~~~~~~~~~~aiiDSGtt~~~lp~~~~ 324 (362)
|+=.+-.++|+|+... +++|||+-.+.+.....
T Consensus 6 ~~RP~v~v~I~Gq~~e-------------~LLDTGAD~TVl~~~~w 38 (104)
T 1fmb_A 6 EKRPTTIVLINDTPLN-------------VLLDTGADTSVLTTAHY 38 (104)
T ss_dssp SSCCEEEEEETTEEEE-------------EEECTTCSSCEEEHHHH
T ss_pred cCCCEEEEEECCEEEE-------------EEeccCCCcEEEccccC
Confidence 4444566899998765 99999999999987665
No 53
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=45.35 E-value=13 Score=28.29 Aligned_cols=31 Identities=13% Similarity=0.161 Sum_probs=25.8
Q ss_pred CceEEEEeEEEEcCEEeeCCCcccccCCCccEEEcccccccccCh
Q 018004 277 PHYSINMTAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPE 321 (362)
Q Consensus 277 ~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~aiiDSGtt~~~lp~ 321 (362)
..|+=.+. ++|+|+.+. +++|||+-.+.+..
T Consensus 10 ~l~~rP~v-ikI~Gq~~e-------------aLLDTGAD~TVi~~ 40 (116)
T 2hah_A 10 LEKRPEIL-IFVNGYPIK-------------FLLDTGADITVLNR 40 (116)
T ss_dssp SSSCCEEE-EEETTEEEE-------------EEECTTCSSCEEEG
T ss_pred cccCCCEE-EEECCEEEE-------------EEecCCCCcEEEcc
Confidence 35766777 999999775 99999999998875
No 54
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=44.77 E-value=12 Score=27.62 Aligned_cols=30 Identities=7% Similarity=0.166 Sum_probs=24.0
Q ss_pred ceEEEEeEEEEcCEEeeCCCcccccCCCccEEEcccccccccC
Q 018004 278 HYSINMTAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLP 320 (362)
Q Consensus 278 ~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~aiiDSGtt~~~lp 320 (362)
-|+=.+..++|+|+.+. +++|||+-.+.+.
T Consensus 5 l~~RP~vti~I~Gq~~e-------------~LLDTGAD~TVl~ 34 (99)
T 3ec0_A 5 LWKRPVVTAYIEGQPVE-------------VLLDTGADDSIVA 34 (99)
T ss_dssp SSSCCEEEEEETTEEEE-------------EEECTTCSSCEES
T ss_pred cccCCeEEEEECCEEEE-------------EEEecCCCceEEc
Confidence 35555667999999875 9999999988884
No 55
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=42.37 E-value=21 Score=27.88 Aligned_cols=27 Identities=19% Similarity=0.315 Sum_probs=22.2
Q ss_pred EeEEEEcCEEeeCCCcccccCCCccEEEcccccccccChH
Q 018004 283 MTAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEM 322 (362)
Q Consensus 283 l~~i~v~~~~~~~~~~~~~~~~~~~aiiDSGtt~~~lp~~ 322 (362)
+..++|+|+.+. +++|||...+.|+..
T Consensus 24 ~v~i~I~G~~~~-------------~LlDTGAd~tVl~~~ 50 (132)
T 3slz_A 24 RITLKVGGQPVT-------------FLVDTGAQHSVLTQN 50 (132)
T ss_dssp EEEEEETTEEEE-------------EEECTTCSSCEECSC
T ss_pred EEEEEECCEEEE-------------EEEeCCCCeEEEccc
Confidence 345889998775 899999999999764
No 56
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=39.99 E-value=32 Score=28.94 Aligned_cols=28 Identities=25% Similarity=0.222 Sum_probs=24.6
Q ss_pred EEEEEEeCCCCceEEEEEEcCCCeeeEeCC
Q 018004 76 YYAKIGIGTPPKDYYVQVDTGSDIMWVNCI 105 (362)
Q Consensus 76 Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~ 105 (362)
=.+.+.|| +|.++.++|||.+++-+...
T Consensus 113 P~~~iki~--Gq~~e~LlDTGAD~TVl~~~ 140 (203)
T 3ka2_A 113 PLVTIRIG--GQLKEALLDTGADDTVIEEL 140 (203)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEECSC
T ss_pred CcEEEEEC--CEEEeeeecccCCceeeecc
Confidence 47889999 89999999999999988643
No 57
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=38.84 E-value=15 Score=33.22 Aligned_cols=39 Identities=26% Similarity=0.427 Sum_probs=24.9
Q ss_pred ecCcCCCCceEEEEeEEEEcCEEeeCCCcccccCCCccEEEcccccccccChH
Q 018004 270 TPLVPNQPHYSINMTAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEM 322 (362)
Q Consensus 270 ~p~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~aiiDSGtt~~~lp~~ 322 (362)
+|+.....+|.++ |.||. |++.+. ++||||++.+++|..
T Consensus 5 ~~l~~~~~~Y~~~---i~iGt-----P~Q~~~------v~~DTGSs~~Wv~~~ 43 (339)
T 3fv3_A 5 LSLINEGPSYASK---VSVGS-----NKQQQT------VIIDTGSSDFWVVDS 43 (339)
T ss_dssp EEEEECSSSEEEE---EEETT-----TTEEEE------EEEETTCCCEEEEEE
T ss_pred eEEEcCCCEEEEE---EEEcC-----CCcEEE------EEEeCCCCceEEecC
Confidence 4554445567654 56662 222222 899999999999854
No 58
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=36.93 E-value=17 Score=32.90 Aligned_cols=15 Identities=20% Similarity=0.532 Sum_probs=13.6
Q ss_pred EEEcccccccccChH
Q 018004 308 TIIDSGTTLAYLPEM 322 (362)
Q Consensus 308 aiiDSGtt~~~lp~~ 322 (362)
++||||++.+++|..
T Consensus 29 v~~DTGSs~~Wv~~~ 43 (334)
T 1j71_A 29 VVIDTGSSDLWVVDT 43 (334)
T ss_dssp EEEETTCCCEEEEEE
T ss_pred EEEcCCCCCEEEecC
Confidence 999999999999854
No 59
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=35.85 E-value=20 Score=32.38 Aligned_cols=15 Identities=20% Similarity=0.479 Sum_probs=13.7
Q ss_pred EEEcccccccccChH
Q 018004 308 TIIDSGTTLAYLPEM 322 (362)
Q Consensus 308 aiiDSGtt~~~lp~~ 322 (362)
++||||++.+++|..
T Consensus 29 v~~DTGSs~lWv~~~ 43 (340)
T 1wkr_A 29 LLVDTGSSNTWLGAD 43 (340)
T ss_dssp EEEETTCCCCEECSS
T ss_pred EEEeCCChhheecCC
Confidence 999999999999863
No 60
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=35.20 E-value=27 Score=31.34 Aligned_cols=40 Identities=25% Similarity=0.345 Sum_probs=27.1
Q ss_pred eEecCcCCCCceEEEEeEEEEcCEEeeCCCcccccCCCccEEEcccccccccChHHH
Q 018004 268 NKTPLVPNQPHYSINMTAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVY 324 (362)
Q Consensus 268 ~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~aiiDSGtt~~~lp~~~~ 324 (362)
...|+. ....|.+ .|+||.+.+. ++||||++.+++|..-.
T Consensus 7 ~~~~~~-~~~~Y~~---~i~iG~Q~~~-------------v~~DTGSs~lWv~~~~C 46 (323)
T 1bxo_A 7 TNTPTA-NDEEYIT---PVTIGGTTLN-------------LNFDTGSADLWVFSTEL 46 (323)
T ss_dssp EEEECG-GGSCEEE---EEEETTEEEE-------------EEEETTCCCEEECBTTS
T ss_pred eeeecC-CCCEEEE---EEEECCEEEE-------------EEEeCCCcceEEecCCC
Confidence 344543 3345654 4677755543 89999999999997643
No 61
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=33.83 E-value=29 Score=31.13 Aligned_cols=40 Identities=25% Similarity=0.298 Sum_probs=26.9
Q ss_pred eEecCcCCCCceEEEEeEEEEcCEEeeCCCcccccCCCccEEEcccccccccChHHH
Q 018004 268 NKTPLVPNQPHYSINMTAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVY 324 (362)
Q Consensus 268 ~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~aiiDSGtt~~~lp~~~~ 324 (362)
...|+. ....|.+ .|+||.+.+. ++||||++.+++|..-.
T Consensus 7 ~~~~~~-~~~~Y~~---~i~iG~q~~~-------------v~~DTGSs~lWv~~~~C 46 (323)
T 1izd_A 7 TTNPTS-NDEEYIT---QVTVGDDTLG-------------LDFDTGSADLWVFSSQT 46 (323)
T ss_dssp EEEECG-GGCCEEE---EEEETTEEEE-------------EEEETTCCCEEECBTTS
T ss_pred eeeEcC-CCCEEEE---EEEECCEEEE-------------EEEcCCCcceEEecCCC
Confidence 344543 3445654 4677755443 89999999999998643
No 62
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=33.60 E-value=20 Score=32.41 Aligned_cols=15 Identities=27% Similarity=0.744 Sum_probs=13.6
Q ss_pred EEEcccccccccChH
Q 018004 308 TIIDSGTTLAYLPEM 322 (362)
Q Consensus 308 aiiDSGtt~~~lp~~ 322 (362)
++||||++.+++|..
T Consensus 29 v~~DTGSs~~Wv~~~ 43 (342)
T 2qzx_A 29 VIVDTGSSDLWIPDS 43 (342)
T ss_dssp EEEETTCCCEEEEEE
T ss_pred EEEeCCCCCeEEecC
Confidence 999999999999854
No 63
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=32.67 E-value=22 Score=32.15 Aligned_cols=15 Identities=27% Similarity=0.789 Sum_probs=13.6
Q ss_pred EEEcccccccccChH
Q 018004 308 TIIDSGTTLAYLPEM 322 (362)
Q Consensus 308 aiiDSGtt~~~lp~~ 322 (362)
+++|||++.+++|..
T Consensus 29 v~~DTGSs~~Wv~~~ 43 (342)
T 3pvk_A 29 VIVDTGSSDLWVPDV 43 (342)
T ss_dssp EEEETTCCCEEEEEE
T ss_pred EEEECCCcceEEEcC
Confidence 899999999999864
No 64
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=31.81 E-value=29 Score=31.25 Aligned_cols=30 Identities=17% Similarity=0.231 Sum_probs=22.4
Q ss_pred CceEEEEeEEEEcCEEeeCCCcccccCCCccEEEcccccccccChH
Q 018004 277 PHYSINMTAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEM 322 (362)
Q Consensus 277 ~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~aiiDSGtt~~~lp~~ 322 (362)
..|.+ .|+||.+.+. ++||||++.+++|..
T Consensus 17 ~~Y~~---~i~iG~Q~~~-------------v~~DTGSs~lWv~~~ 46 (330)
T 1yg9_A 17 TQYAG---ITKIGNQNFL-------------TVFDSTSCNVVVASQ 46 (330)
T ss_dssp TTSEE---EEEETTEEEE-------------EEEETTCCCEEEECT
T ss_pred CEEEE---EEEECCEEEE-------------EEEeCCCcceEEecC
Confidence 45654 4677755543 899999999999965
No 65
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=31.38 E-value=30 Score=31.07 Aligned_cols=40 Identities=25% Similarity=0.268 Sum_probs=27.0
Q ss_pred eEecCcCCCCceEEEEeEEEEcCEEeeCCCcccccCCCccEEEcccccccccChHHH
Q 018004 268 NKTPLVPNQPHYSINMTAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVY 324 (362)
Q Consensus 268 ~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~~~~~aiiDSGtt~~~lp~~~~ 324 (362)
...|+. ....|.+ .|+||.+.+. ++||||++.+++|..-.
T Consensus 6 ~~~~~~-~~~~Y~~---~i~iG~Q~~~-------------v~~DTGSs~lWv~~~~C 45 (325)
T 1ibq_A 6 VTTPQN-NDEEYLT---PVTVGKSTLH-------------LDFDTGSADLWVFSDEL 45 (325)
T ss_dssp EEEECT-TTSCEEE---EEEEBTEEEE-------------EEEETTCCCEEEECTTS
T ss_pred EeEEcC-CCCEEEE---EEEECCEEEE-------------EEEeCCCccceEeeCCC
Confidence 344543 3456664 4667755543 89999999999987543
No 66
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=29.36 E-value=36 Score=29.07 Aligned_cols=15 Identities=27% Similarity=0.749 Sum_probs=13.8
Q ss_pred EEEcccccccccChH
Q 018004 308 TIIDSGTTLAYLPEM 322 (362)
Q Consensus 308 aiiDSGtt~~~lp~~ 322 (362)
++||||++.+++|..
T Consensus 30 v~~DTGSs~lWv~~~ 44 (239)
T 1b5f_A 30 VIFDTGSSVLWVPSS 44 (239)
T ss_dssp EEEETTCCCEEEEBT
T ss_pred EEEeCCCcceEEEcC
Confidence 999999999999864
No 67
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=27.84 E-value=38 Score=30.33 Aligned_cols=15 Identities=20% Similarity=0.656 Sum_probs=14.0
Q ss_pred EEEcccccccccChH
Q 018004 308 TIIDSGTTLAYLPEM 322 (362)
Q Consensus 308 aiiDSGtt~~~lp~~ 322 (362)
++||||++.+++|..
T Consensus 31 v~~DTGSs~~Wv~~~ 45 (323)
T 3cms_A 31 VLFDTGSSDFWVPSI 45 (323)
T ss_dssp EEEETTCCCEEEEBT
T ss_pred EEEeCCccceEEcCC
Confidence 999999999999875
No 68
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=26.76 E-value=46 Score=29.88 Aligned_cols=17 Identities=12% Similarity=0.073 Sum_probs=14.9
Q ss_pred EEEcccccccccChHHH
Q 018004 308 TIIDSGTTLAYLPEMVY 324 (362)
Q Consensus 308 aiiDSGtt~~~lp~~~~ 324 (362)
++||||++.+++|..-.
T Consensus 32 v~~DTGSs~lWv~~~~C 48 (329)
T 3c9x_A 32 LDFDTGSSDLWVFSSET 48 (329)
T ss_dssp EEEETTCCCEEECBTTS
T ss_pred EEEcCCCCCeEEecCCC
Confidence 99999999999997643
No 69
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=26.28 E-value=38 Score=30.37 Aligned_cols=15 Identities=20% Similarity=0.682 Sum_probs=13.9
Q ss_pred EEEcccccccccChH
Q 018004 308 TIIDSGTTLAYLPEM 322 (362)
Q Consensus 308 aiiDSGtt~~~lp~~ 322 (362)
++||||++.+++|..
T Consensus 29 v~~DTGSs~lWv~~~ 43 (329)
T 1htr_B 29 VLFDTGSSNLWVPSV 43 (329)
T ss_dssp EEEETTCCCEEEEBT
T ss_pred EEEcCCCccEEEecC
Confidence 999999999999875
No 70
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=25.98 E-value=48 Score=29.72 Aligned_cols=16 Identities=13% Similarity=0.117 Sum_probs=14.4
Q ss_pred EEEcccccccccChHH
Q 018004 308 TIIDSGTTLAYLPEMV 323 (362)
Q Consensus 308 aiiDSGtt~~~lp~~~ 323 (362)
++||||++.+++|..-
T Consensus 32 v~~DTGSs~lWv~~~~ 47 (329)
T 1oew_A 32 LDFDTGSSDLWVFSSE 47 (329)
T ss_dssp EEEETTCCCEEECBTT
T ss_pred EEECCCCCCeEEecCC
Confidence 9999999999999753
No 71
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=25.79 E-value=43 Score=29.96 Aligned_cols=15 Identities=13% Similarity=0.297 Sum_probs=13.9
Q ss_pred EEEcccccccccChH
Q 018004 308 TIIDSGTTLAYLPEM 322 (362)
Q Consensus 308 aiiDSGtt~~~lp~~ 322 (362)
++||||++.+++|..
T Consensus 32 v~~DTGSs~lWv~~~ 46 (325)
T 2apr_A 32 LDFDTGSSDLWIAST 46 (325)
T ss_dssp EEEETTCCCCEEEBT
T ss_pred EEEcCCCCCEEEccC
Confidence 999999999999875
No 72
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=25.71 E-value=59 Score=24.60 Aligned_cols=26 Identities=8% Similarity=0.222 Sum_probs=21.5
Q ss_pred EeEEEEcCEEeeCCCcccccCCCccEEEcccccccccCh
Q 018004 283 MTAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPE 321 (362)
Q Consensus 283 l~~i~v~~~~~~~~~~~~~~~~~~~aiiDSGtt~~~lp~ 321 (362)
+..++|+|+.+. +++|||.-.+.+..
T Consensus 11 ~vti~I~Gq~~e-------------aLLDTGADdTVi~~ 36 (114)
T 3sqf_A 11 SLTLWLDDKMFT-------------GLINTGADVTIIKL 36 (114)
T ss_dssp EEEEEETTEEEE-------------EEECTTCSSCEEEG
T ss_pred eEEEEECCEEEE-------------EEEccCCCceEEec
Confidence 455888998775 99999999988864
No 73
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=25.07 E-value=62 Score=27.34 Aligned_cols=32 Identities=16% Similarity=0.228 Sum_probs=23.6
Q ss_pred ccEEE---EEEeCCC----CceEEEEEEcCCCeeeEeCC
Q 018004 74 GLYYA---KIGIGTP----PKDYYVQVDTGSDIMWVNCI 105 (362)
Q Consensus 74 ~~Y~~---~i~vGtP----~q~~~v~~DTGSs~~Wv~~~ 105 (362)
++|.+ .|.||.- .....+++|||++.+++|..
T Consensus 99 ~~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~~ 137 (241)
T 1lya_B 99 AYWQVHLDQVEVASGLTLCKEGCEAIVDTGTSLMVGPVD 137 (241)
T ss_dssp TTBEEEEEEEEETTSCEESTTCEEEEECTTCSSEEECHH
T ss_pred cEEEEEEeEEEECCeeEeccCCCEEEEECCCccccCCHH
Confidence 45555 5678752 34578999999999999874
No 74
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=22.98 E-value=52 Score=29.88 Aligned_cols=42 Identities=21% Similarity=0.372 Sum_probs=27.5
Q ss_pred CCceEecCcCC-CCceEEEEeEEEEc--CEEeeCCCcccccCCCccEEEcccccccccChH
Q 018004 265 PEVNKTPLVPN-QPHYSINMTAVQVG--LDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEM 322 (362)
Q Consensus 265 ~~~~~~p~~~~-~~~w~v~l~~i~v~--~~~~~~~~~~~~~~~~~~aiiDSGtt~~~lp~~ 322 (362)
+.....|+... ...|.+ .|.|| .+.+. ++||||++.+++|..
T Consensus 5 g~~~~~~l~~~~~~~Y~~---~i~iGtP~q~~~-------------v~~DTGSs~~Wv~~~ 49 (361)
T 1mpp_A 5 GSVDTPGLYDFDLEEYAI---PVSIGTPGQDFY-------------LLFDTGSSDTWVPHK 49 (361)
T ss_dssp CCEEEEEEEETTTTEEEE---EEEETTTTEEEE-------------EEEETTCCCCEEEBT
T ss_pred CccceEEeecCCCCEEEE---EEEECCCCcEEE-------------EEEcCCCCCeEECCC
Confidence 34455666532 345654 46676 34332 999999999999975
No 75
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=22.91 E-value=53 Score=29.40 Aligned_cols=15 Identities=27% Similarity=0.665 Sum_probs=13.9
Q ss_pred EEEcccccccccChH
Q 018004 308 TIIDSGTTLAYLPEM 322 (362)
Q Consensus 308 aiiDSGtt~~~lp~~ 322 (362)
++||||++.+++|..
T Consensus 30 v~~DTGSs~lWv~~~ 44 (329)
T 1dpj_A 30 VILDTGSSNLWVPSN 44 (329)
T ss_dssp EEEETTCCCEEEEBT
T ss_pred EEEeCCCcCeEEecC
Confidence 999999999999875
No 76
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=22.84 E-value=42 Score=25.41 Aligned_cols=27 Identities=19% Similarity=0.437 Sum_probs=20.9
Q ss_pred EEeEEEEc-----CEEeeCCCcccccCCCccEEEcccccccccCh
Q 018004 282 NMTAVQVG-----LDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPE 321 (362)
Q Consensus 282 ~l~~i~v~-----~~~~~~~~~~~~~~~~~~aiiDSGtt~~~lp~ 321 (362)
.+-.|+|+ |+.+. +++|||.-.+.++.
T Consensus 11 PlvtikI~~~~~~Gq~~e-------------aLLDTGADdTVl~~ 42 (116)
T 3liy_A 11 PVIKAQVDTQTSHPKTIE-------------ALLDTGADMTVIPI 42 (116)
T ss_dssp CEEEEEEECSSSCCEEEE-------------EEECTTBSSCEEEG
T ss_pred CeEEEEEccccCCCeEeE-------------EEeccCCCccEEec
Confidence 45567777 66554 99999999999875
No 77
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=21.27 E-value=58 Score=30.17 Aligned_cols=15 Identities=7% Similarity=0.118 Sum_probs=13.7
Q ss_pred EEEcccccccccChH
Q 018004 308 TIIDSGTTLAYLPEM 322 (362)
Q Consensus 308 aiiDSGtt~~~lp~~ 322 (362)
++||||++.+++|..
T Consensus 38 v~~DTGSs~lWv~~~ 52 (403)
T 3aup_A 38 VLVDLNGNHLWVNCE 52 (403)
T ss_dssp EEEETTCSSEEEECS
T ss_pred EEEECCCCceeECCC
Confidence 999999999999864
No 78
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=21.23 E-value=58 Score=30.00 Aligned_cols=15 Identities=13% Similarity=0.293 Sum_probs=13.7
Q ss_pred EEEcccccccccChH
Q 018004 308 TIIDSGTTLAYLPEM 322 (362)
Q Consensus 308 aiiDSGtt~~~lp~~ 322 (362)
++||||++.+++|..
T Consensus 38 v~~DTGSs~lWv~~~ 52 (395)
T 2qp8_A 38 ILVDTGSSNFAVGAA 52 (395)
T ss_dssp EEEETTCCCEEEECS
T ss_pred EEEecCCCceEEECC
Confidence 999999999999864
No 79
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=20.78 E-value=70 Score=28.46 Aligned_cols=15 Identities=20% Similarity=0.483 Sum_probs=14.0
Q ss_pred EEEcccccccccChH
Q 018004 308 TIIDSGTTLAYLPEM 322 (362)
Q Consensus 308 aiiDSGtt~~~lp~~ 322 (362)
++||||++.+++|..
T Consensus 29 v~~DTGSs~~Wv~~~ 43 (324)
T 1am5_A 29 VIFDTGSSNLWVSSS 43 (324)
T ss_dssp EEEETTCCCEEECBT
T ss_pred EEEeCCCcceEEecC
Confidence 999999999999975
No 80
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=20.32 E-value=63 Score=29.57 Aligned_cols=15 Identities=13% Similarity=0.319 Sum_probs=13.7
Q ss_pred EEEcccccccccChH
Q 018004 308 TIIDSGTTLAYLPEM 322 (362)
Q Consensus 308 aiiDSGtt~~~lp~~ 322 (362)
++||||++.+++|..
T Consensus 30 v~~DTGSs~lWv~~~ 44 (383)
T 2ewy_A 30 ILVDTGSSNFAVAGT 44 (383)
T ss_dssp EEEETTCCCEEEECS
T ss_pred EEEecCCCceEEecC
Confidence 999999999999864
No 81
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=20.19 E-value=65 Score=28.57 Aligned_cols=15 Identities=20% Similarity=0.687 Sum_probs=13.9
Q ss_pred EEEcccccccccChH
Q 018004 308 TIIDSGTTLAYLPEM 322 (362)
Q Consensus 308 aiiDSGtt~~~lp~~ 322 (362)
+++|||++.+++|..
T Consensus 28 v~~DTGSs~~Wv~~~ 42 (320)
T 4aa9_A 28 VVFDTGSSDLWVPSI 42 (320)
T ss_dssp EEEETTCCCEEEEBT
T ss_pred EEEeCCCCceEEcCC
Confidence 999999999999875
No 82
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=20.16 E-value=36 Score=26.18 Aligned_cols=14 Identities=29% Similarity=0.710 Sum_probs=12.3
Q ss_pred EEEcccccccccCh
Q 018004 308 TIIDSGTTLAYLPE 321 (362)
Q Consensus 308 aiiDSGtt~~~lp~ 321 (362)
+++|||.-.+.++.
T Consensus 34 aLLDTGAD~TVl~~ 47 (124)
T 2rsp_A 34 ALLDSGADITIISE 47 (124)
T ss_dssp EEECTTCSSCEEET
T ss_pred EEecCCCCcEEEec
Confidence 99999999988864
Done!