Your job contains 1 sequence.
>018005
MFPKRREMDPAIWSRLPEDLLDHVLSFLPPKMLLKLRSTCKHFNSLLFSPSFLSKTKCSS
SAFSCFILLSHPQCYDQYPLYDSTHGTWRRLSLPYSLLLPSAATLLSSSKGLLCFSLPSS
SSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQS
WSKFDIDGFPSMILSQSSHQEGVFYKGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMT
MMLPHELTFFRLVNDGEESNKLYLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCR
KFMSVCYHNYDHVYCFWHQGMICVCCYTWPEILYYNVARRTWHWLPSCPSLPHKWSCGFS
WC
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 018005
(362 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2169253 - symbol:AT5G43190 "AT5G43190" species... 819 1.2e-81 1
TAIR|locus:2143256 - symbol:AT5G15710 "AT5G15710" species... 195 3.2e-20 2
TAIR|locus:2015766 - symbol:UFO "AT1G30950" species:3702 ... 126 2.5e-11 2
TAIR|locus:2015974 - symbol:LCR "AT1G27340" species:3702 ... 141 2.0e-10 2
TAIR|locus:2125889 - symbol:AT4G33160 "AT4G33160" species... 112 1.3e-06 2
TAIR|locus:2082797 - symbol:HWS "HAWAIIAN SKIRT" species:... 107 1.5e-06 3
>TAIR|locus:2169253 [details] [associations]
symbol:AT5G43190 "AT5G43190" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0006865 "amino acid transport" evidence=RCA] [GO:0006869 "lipid
transport" evidence=RCA] [GO:0015824 "proline transport"
evidence=RCA] InterPro:IPR001810 InterPro:IPR011498
InterPro:IPR015915 Pfam:PF00646 Pfam:PF07646 PROSITE:PS50181
SMART:SM00256 EMBL:CP002688 GenomeReviews:BA000015_GR
SUPFAM:SSF81383 Gene3D:2.120.10.80 InterPro:IPR017451
TIGRFAMs:TIGR01640 EMBL:AB017070 InterPro:IPR011043 SUPFAM:SSF50965
EMBL:BT003084 EMBL:AK227592 IPI:IPI00525493 RefSeq:NP_568622.1
UniGene:At.27993 ProteinModelPortal:Q9FHS6 SMR:Q9FHS6 IntAct:Q9FHS6
PRIDE:Q9FHS6 EnsemblPlants:AT5G43190.1 GeneID:834337
KEGG:ath:AT5G43190 TAIR:At5g43190 eggNOG:NOG250994
HOGENOM:HOG000112600 InParanoid:Q9FHS6 OMA:SCGFRWF PhylomeDB:Q9FHS6
ProtClustDB:CLSN2689919 Genevestigator:Q9FHS6 Uniprot:Q9FHS6
Length = 403
Score = 819 (293.4 bits), Expect = 1.2e-81, P = 1.2e-81
Identities = 162/360 (45%), Positives = 208/360 (57%)
Query: 8 MDPAIWSRLPEDLLDHVLSFLPPKMLLKLRSTCKHXXXXXXXXXXXXKTKCSSSAFSCFI 67
+DP IWS LP LL+H+LS LP K LL LRS +H S + F+
Sbjct: 43 LDPNIWSNLPNHLLEHILSLLPFKTLLTLRSISRHLRSLILSPSFISD---HSFSLPSFL 99
Query: 68 LLSHPQCYDQYPLYDSTHGTWRRXXXXXXXXXXXXXXXXXXXKGXX--XXXXXXXXXXXV 125
LLSHPQ ++ +PL++ +W G +
Sbjct: 100 LLSHPQSFNSFPLFNPNLISWCTLPLPRSLSLTCASSLLSSSNGLLCFSLSPSSVSSLSI 159
Query: 126 CNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFP---NYAFVYDSTDQSWS 182
N +T SSR+I P YPF FELL+LV++P GYKIF L + S +YDS D+SW
Sbjct: 160 FNPLTRSSRSIKLPCYPFPFELLSLVTSPKGYKIFTLCSSSSAASSRSVCLYDSGDRSWR 219
Query: 183 KFDIDGFPSMILSQSSHQEGVFYKGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMM 242
KF G +L + +Q+GVFY GSLYF EPF IV DL +G W T A
Sbjct: 220 KF---GGVDQVLPRGFNQDGVFYNGSLYFARSEPFLIVSVDLNDGKWTT---ATGDGVFP 273
Query: 243 LPHELTFFRLVNDGEESNKLYLIGGVGRNGISTTMKLWELGCGG-NWIEVERVPEMMCRK 301
E+TF RLV+D E+ LY++GG+G NGI ++K+WE +WIEVE +P+++CRK
Sbjct: 274 ADDEITFARLVSDPEKKI-LYMVGGIGSNGICRSIKIWEFKEETESWIEVETLPDIVCRK 332
Query: 302 FMSVCYHNYDHVYCFWHQGMICVCCYTWPEILYYNVARRTWHWLPSCPSLPHKWSCGFSW 361
F SVCYHNY+HVYC WH+ MICVCCY WPEIL+++V RRTWHW+P CPSLP KWSCGF W
Sbjct: 333 FTSVCYHNYEHVYCLWHKEMICVCCYNWPEILFFHVGRRTWHWVPKCPSLPEKWSCGFRW 392
>TAIR|locus:2143256 [details] [associations]
symbol:AT5G15710 "AT5G15710" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181
SMART:SM00256 EMBL:CP002688 GenomeReviews:BA000015_GR
SUPFAM:SSF81383 Gene3D:2.130.10.80 InterPro:IPR015916 EMBL:AL391144
EMBL:AK229249 EMBL:BT011243 EMBL:BT012539 IPI:IPI00543903
PIR:T51400 RefSeq:NP_197075.1 UniGene:At.31763
ProteinModelPortal:Q9LFV5 SMR:Q9LFV5 STRING:Q9LFV5
EnsemblPlants:AT5G15710.1 GeneID:831425 KEGG:ath:AT5G15710
TAIR:At5g15710 eggNOG:NOG262508 HOGENOM:HOG000005882
InParanoid:Q9LFV5 OMA:SKMAFCD PhylomeDB:Q9LFV5
ProtClustDB:CLSN2687485 Genevestigator:Q9LFV5 Uniprot:Q9LFV5
Length = 448
Score = 195 (73.7 bits), Expect = 3.2e-20, Sum P(2) = 3.2e-20
Identities = 60/230 (26%), Positives = 101/230 (43%)
Query: 125 VCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKS--FPNYAF---VYDSTDQ 179
VCN + S RT+ Y +L+ +V K F + A S + + + VYDS
Sbjct: 217 VCNPLMQSWRTLPSMHYNQQRQLIMVVDRSD--KSFKVIATSDIYGDKSLPTEVYDSKTD 274
Query: 180 SWSKFDIDGFPSMILSQSSHQEGVFYKGSLYFTTPEPFSIVRFDLENGIWETPNDANDHM 239
WS I P++ L S + LY T P ++ + L++G WE H+
Sbjct: 275 KWSLHQI--MPAVNLCSSKM---AYCDSRLYLETLSPLGLMMYRLDSGQWE-------HI 322
Query: 240 TMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGISTTMKLWELG-CGGNWIEVERVPEMM 298
P L LV ++ +L+L+G +G +M++WEL +W+E+ R+P
Sbjct: 323 PAKFPRSLLDGYLVAGTQK--RLFLVGRIGLYSTLQSMRIWELDHTKVSWVEISRMPPKY 380
Query: 299 CRKFMSVCYHNYDHVYCFWHQGMICVCCYTWPEILYYNVARRTWHWLPSC 348
R + + ++ CF +IC + + L YNV ++ W W+ C
Sbjct: 381 FRALLRLSAERFE---CFGQDNLICFTSWNQGKGLLYNVDKKIWSWISGC 427
Score = 105 (42.0 bits), Expect = 3.2e-20, Sum P(2) = 3.2e-20
Identities = 17/35 (48%), Positives = 27/35 (77%)
Query: 7 EMDPAIWSRLPEDLLDHVLSFLPPKMLLKLRSTCK 41
+M+ IW+ LPEDLL+ +L+ +PP M+ ++RS CK
Sbjct: 98 QMEDGIWAMLPEDLLNEILARVPPFMIFRIRSVCK 132
>TAIR|locus:2015766 [details] [associations]
symbol:UFO "AT1G30950" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS;IMP] [GO:0005634 "nucleus" evidence=ISM] [GO:0000151
"ubiquitin ligase complex" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=RCA;TAS] [GO:0031146 "SCF-dependent
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IGI] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0042752 "regulation of circadian rhythm"
evidence=RCA] InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181
SMART:SM00256 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0030154 GO:GO:0006355
GO:GO:0006351 SUPFAM:SSF81383 GO:GO:0009908 GO:GO:0004842
GO:GO:0031146 EMBL:AC000107 EMBL:X89224 EMBL:DQ056469
IPI:IPI00521563 PIR:S57710 RefSeq:NP_564368.1 UniGene:At.51845
ProteinModelPortal:Q39090 SMR:Q39090 IntAct:Q39090 STRING:Q39090
EnsemblPlants:AT1G30950.1 GeneID:839982 KEGG:ath:AT1G30950
TAIR:At1g30950 eggNOG:NOG303383 HOGENOM:HOG000084155
InParanoid:Q39090 OMA:VEIERMP PhylomeDB:Q39090
ProtClustDB:CLSN2688127 ArrayExpress:Q39090 Genevestigator:Q39090
GermOnline:AT1G30950 Uniprot:Q39090
Length = 442
Score = 126 (49.4 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 51/236 (21%), Positives = 102/236 (43%)
Query: 125 VCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKF 184
+CN + S + + P F + L TP+ + + YA V + + +S+
Sbjct: 175 LCNPLVGSVSQLPPISRPRLFPSIGLSVTPTSIDVTVAGDDLISPYA-VKNLSSESFH-V 232
Query: 185 DIDGFPSM-ILSQS-----SHQEG--VFYKGSLYFTTPEPFSIVRFDLENGIWETPNDAN 236
D GF S+ ++ S S + G V+ +G Y PFS++ +++ W
Sbjct: 233 DAGGFFSLWAMTSSLPRLCSLESGKMVYVQGKFYCMNYSPFSVLSYEVTGNRW------- 285
Query: 237 DHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGIST--TMKLWELGC-GGNWIEVER 293
+ + P F R + E +L L+ V ++ ++ +++LW L W+E+ER
Sbjct: 286 --IKIQAPMR-RFLRSPSLLESKGRLILVAAVEKSKLNVPKSLRLWSLQQDNATWVEIER 342
Query: 294 VPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYTWPEILYYNVARRTWHWLPSCP 349
+P+ + +F + C +Q + + L +++ R++W W+P CP
Sbjct: 343 MPQPLYTQFAAE--EGGKGFECVGNQEFVMIVLRGTSLQLLFDIVRKSWLWVPPCP 396
Score = 100 (40.3 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 8 MDPAIWSRLPEDLLDHVLSFLPPKMLLKLRSTCK 41
MD IWS+LP LLD V++FLPP + R CK
Sbjct: 42 MDGRIWSKLPPPLLDRVIAFLPPPAFFRTRCVCK 75
>TAIR|locus:2015974 [details] [associations]
symbol:LCR "AT1G27340" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0010305 "leaf vascular tissue pattern
formation" evidence=IMP] [GO:0010928 "regulation of auxin mediated
signaling pathway" evidence=IMP] [GO:0060776 "simple leaf
morphogenesis" evidence=IMP] InterPro:IPR001810 InterPro:IPR015915
Pfam:PF00646 PROSITE:PS50181 SMART:SM00256 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF81383 Gene3D:2.120.10.80
EMBL:AC004557 GO:GO:0010305 GO:GO:0010928 InterPro:IPR011043
SUPFAM:SSF50965 EMBL:AY085471 EMBL:BT025325 IPI:IPI00546257
RefSeq:NP_564278.1 UniGene:At.20471 UniGene:At.22230
ProteinModelPortal:Q9FZK1 SMR:Q9FZK1 IntAct:Q9FZK1 STRING:Q9FZK1
PRIDE:Q9FZK1 EnsemblPlants:AT1G27340.1 GeneID:839623
KEGG:ath:AT1G27340 TAIR:At1g27340 eggNOG:NOG325143
HOGENOM:HOG000238626 InParanoid:Q9FZK1 OMA:ATFFRFR PhylomeDB:Q9FZK1
ProtClustDB:CLSN2688013 Genevestigator:Q9FZK1 GO:GO:0060776
Uniprot:Q9FZK1
Length = 467
Score = 141 (54.7 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 57/219 (26%), Positives = 98/219 (44%)
Query: 152 STPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMI---LSQSSHQEGVFYKGS 208
ST GYK+ + + Y VYDS W+K PS I + + + V +
Sbjct: 259 STSHGYKVLWVGCEG--EYE-VYDSLSNVWTKRGT--IPSNIKLPVLLNFKSQPVAIHST 313
Query: 209 LYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGV 268
LYF +P I+ +D+ +G W+ + P +L+ L GE +L L+G +
Sbjct: 314 LYFMLTDPEGILSYDMVSGKWK-------QFIIPGPPDLSDHTLAACGE---RLMLVGLL 363
Query: 269 GRNGISTTMKLWELG-CGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCY 327
+N +T + +WEL W EV+R+P + C +F Y + + C ++G + +
Sbjct: 364 TKNA-ATCVCIWELQKMTLLWKEVDRMPNIWCLEF----YGKHIRMNCLGNKGCLILLSL 418
Query: 328 TWPE---ILYYNVARRTWHWLPSCPSLPHK----W-SCG 358
+ ++ YN R W +P C ++P W +CG
Sbjct: 419 RSRQMNRLITYNAVTREWTKVPGC-TVPRGRKRLWIACG 456
Score = 75 (31.5 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 8 MDPAIWSRLPEDLLDHVLSFLPPKMLLKLRSTCK 41
MD IW P+DL + V+S LP + R+ C+
Sbjct: 112 MDQEIWQEFPQDLFEDVVSRLPMATFFQFRAVCR 145
Score = 37 (18.1 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 60 SSAFSCFILLSHPQ 73
SS+ F++L HPQ
Sbjct: 34 SSSSPSFLVLHHPQ 47
>TAIR|locus:2125889 [details] [associations]
symbol:AT4G33160 "AT4G33160" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181 SMART:SM00256
EMBL:CP002687 GenomeReviews:CT486007_GR SUPFAM:SSF81383
EMBL:AL161583 Gene3D:2.130.10.80 InterPro:IPR015916
InterPro:IPR011043 SUPFAM:SSF50965 EMBL:AL035525 EMBL:BX828112
EMBL:BT029208 IPI:IPI00536897 PIR:T05196 RefSeq:NP_567915.3
UniGene:At.43589 ProteinModelPortal:Q9SMZ3 SMR:Q9SMZ3
EnsemblPlants:AT4G33160.1 GeneID:829453 KEGG:ath:AT4G33160
TAIR:At4g33160 eggNOG:NOG244008 HOGENOM:HOG000240122
InParanoid:Q9SMZ3 OMA:RSPSKQY Genevestigator:Q9SMZ3 Uniprot:Q9SMZ3
Length = 457
Score = 112 (44.5 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 56/248 (22%), Positives = 99/248 (39%)
Query: 16 LPEDLLDHVLSFLPPKMLLKLRSTCKHXXXXXXXXXXXXKTKCSS--SAFSCFILLSHPQ 73
L +D+L+ VLS+LP ++ S CK K CS + F ++ +
Sbjct: 70 LNDDVLERVLSWLPTSCFFRMSSVCKRWKSSQTSKSF--KLACSQIPTRDPWFFMIDNDS 127
Query: 74 CYDQYPLYDSTHGTWRRXXXXXXXXXXXXXXXXXXXKGXXXXXXXXXXXXXVC-NLVTLS 132
+ ++DST +W+ G + N +T S
Sbjct: 128 NSSSF-VFDSTENSWKNLNRRDFLHHHRQDFIPVASSGGLLCYRCSISGDFLLRNPLTGS 186
Query: 133 SRTIDFPTY------PFDFELLTLVS-TPSGYKIFMLFAKSFPNYAF-VYDSTDQSWSKF 184
SR D P+ P +T + TPS Y + + + PN +F +Y+S SWSK
Sbjct: 187 SR--DIPSQDNNNNKPLQAVAMTTTTVTPSSYTLVTISGE-IPNLSFKIYESNADSWSK- 242
Query: 185 DIDGFPSMILSQSS-HQEGVFYKGSLYFTTPEPFSIVRFDLENGIWETPNDA-NDHMTMM 242
D + S+ + SS H + G++YF + + +V N + +P+ + +T+
Sbjct: 243 DQE-LESVKNNDSSLHDDYDTDSGTVYFLSKQGNVVVA---SNNLQRSPSKQYSSVITVT 298
Query: 243 LPHELTFF 250
E+ +F
Sbjct: 299 DEAEIVYF 306
Score = 70 (29.7 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 19/81 (23%), Positives = 33/81 (40%)
Query: 274 STTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQG-MICVCCYTWPEI 332
S ++++W L W++V +P + + Y + C G I VC P
Sbjct: 358 SASLRIWRLDNNREWVQVGMLPPALSHEL----YGKKGDINCVGGAGNKILVCFNASPPE 413
Query: 333 LY-----YNVARRTWHWLPSC 348
+Y Y++ W+ LP C
Sbjct: 414 VYCRYFVYDLVAEEWNELPKC 434
>TAIR|locus:2082797 [details] [associations]
symbol:HWS "HAWAIIAN SKIRT" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0048513
"organ development" evidence=IMP] [GO:0006869 "lipid transport"
evidence=RCA] InterPro:IPR001810 InterPro:IPR015915 Pfam:PF00646
PROSITE:PS50181 SMART:SM00256 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132962 SUPFAM:SSF81383
Gene3D:2.120.10.80 GO:GO:0004842 GO:GO:0048513 EMBL:AF386994
EMBL:BT000054 IPI:IPI00532966 PIR:T47951 RefSeq:NP_001190155.1
RefSeq:NP_191718.1 UniGene:At.951 ProteinModelPortal:Q9M310
SMR:Q9M310 IntAct:Q9M310 STRING:Q9M310 PRIDE:Q9M310
EnsemblPlants:AT3G61590.1 EnsemblPlants:AT3G61590.2 GeneID:825332
KEGG:ath:AT3G61590 TAIR:At3g61590 eggNOG:NOG301211
HOGENOM:HOG000238968 InParanoid:Q9M310 OMA:DDLIYIQ PhylomeDB:Q9M310
ProtClustDB:CLSN2685255 Genevestigator:Q9M310 Uniprot:Q9M310
Length = 411
Score = 107 (42.7 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 29/111 (26%), Positives = 55/111 (49%)
Query: 243 LPHELTFFRLVNDGEESNKLYLIGGVGRNGISTTMK---LWELGCGGNWIEVERVPEMMC 299
+P LT RL+N E +L ++GG+G++ +K +W L G W+E+ ++P+
Sbjct: 287 MPCSLTCGRLMNLRE---RLVIVGGIGKHDRPEVIKGIGIWVLK-GKEWVEMAKMPQ--- 339
Query: 300 RKFMSVCYHNYDHVYCF-WHQGMICVCCYTWPEILYYNVARRTWHWLPSCP 349
R F + +D V+ ++ + Y P +L +++ + W W CP
Sbjct: 340 RFFQG--FGEFDEVFASSGTDDLVYIQSYGSPALLTFDMNLKYWRWSQKCP 388
Score = 70 (29.7 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 14 SRLPEDLLDHVLSFLPPKMLLKLRSTCK 41
S LP+DLL+ +LSFLP + + + CK
Sbjct: 41 SLLPDDLLERILSFLPIASIFRAGTVCK 68
Score = 39 (18.8 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 8/27 (29%), Positives = 12/27 (44%)
Query: 160 FMLFAKSFPNYAFVYDSTDQSWSKFDI 186
FM P+ + YD + W FD+
Sbjct: 95 FMFTTTDDPS-GYAYDPIIRKWYSFDL 120
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.326 0.139 0.487 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 362 318 0.00083 116 3 11 22 0.47 33
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 6
No. of states in DFA: 623 (66 KB)
Total size of DFA: 293 KB (2149 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 24.86u 0.09s 24.95t Elapsed: 00:00:02
Total cpu time: 24.86u 0.09s 24.95t Elapsed: 00:00:02
Start: Tue May 21 03:52:06 2013 End: Tue May 21 03:52:08 2013