Query 018005
Match_columns 362
No_of_seqs 141 out of 1870
Neff 10.1
Searched_HMMs 29240
Date Mon Mar 25 08:23:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018005.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018005hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ii7_A Kelch-like protein 7; p 99.9 8.2E-24 2.8E-28 189.1 28.5 256 65-358 13-291 (306)
2 1zgk_A Kelch-like ECH-associat 99.9 6.8E-23 2.3E-27 183.4 27.9 256 66-358 27-306 (308)
3 2xn4_A Kelch-like protein 2; s 99.9 2E-22 6.9E-27 179.7 28.9 244 76-357 30-295 (302)
4 4asc_A Kelch repeat and BTB do 99.9 3.7E-22 1.3E-26 179.2 28.5 238 76-350 13-288 (315)
5 2woz_A Kelch repeat and BTB do 99.9 8.1E-22 2.8E-26 177.2 30.3 240 77-355 25-301 (318)
6 2vpj_A Kelch-like protein 12; 99.9 1E-22 3.5E-27 181.5 24.0 246 76-358 31-297 (301)
7 3ii7_A Kelch-like protein 7; p 99.8 6.5E-19 2.2E-23 157.2 25.1 204 120-357 23-243 (306)
8 1zgk_A Kelch-like ECH-associat 99.8 4.2E-19 1.4E-23 158.7 23.8 217 107-357 21-258 (308)
9 2xn4_A Kelch-like protein 2; s 99.8 1.3E-18 4.3E-23 155.0 24.6 201 121-356 30-246 (302)
10 2vpj_A Kelch-like protein 12; 99.8 1.5E-18 5.3E-23 154.4 24.7 215 109-357 13-249 (301)
11 2uvk_A YJHT; unknown function, 99.8 5.4E-19 1.8E-23 161.3 22.1 231 97-357 6-312 (357)
12 2uvk_A YJHT; unknown function, 99.8 5.5E-18 1.9E-22 154.6 25.9 240 76-349 31-352 (357)
13 4asc_A Kelch repeat and BTB do 99.8 7E-18 2.4E-22 151.2 21.8 210 112-357 6-239 (315)
14 2woz_A Kelch repeat and BTB do 99.8 4.9E-17 1.7E-21 145.9 23.5 210 111-357 16-249 (318)
15 1k3i_A Galactose oxidase precu 99.7 4.8E-16 1.7E-20 153.0 20.5 246 78-358 168-516 (656)
16 2zwa_A Leucine carboxyl methyl 99.7 5.9E-15 2E-19 145.8 23.6 213 107-346 394-642 (695)
17 2zwa_A Leucine carboxyl methyl 99.6 6.4E-14 2.2E-18 138.4 21.0 201 76-297 412-646 (695)
18 1k3i_A Galactose oxidase precu 99.5 1.6E-12 5.4E-17 128.0 23.0 205 77-295 220-507 (656)
19 1fs1_A SKP2 F-BOX, cyclin A/CD 99.1 2.6E-11 8.9E-16 77.4 3.4 44 9-52 5-48 (53)
20 3v7d_B Cell division control p 99.0 3.7E-07 1.3E-11 85.4 27.1 41 9-49 11-51 (464)
21 2e31_A FBS1, F-box only protei 98.9 1.7E-10 5.7E-15 100.1 1.4 52 8-59 46-98 (297)
22 2ovr_B FBW7, F-BOX/WD repeat p 98.9 1.5E-07 5.1E-12 87.7 20.4 239 10-283 16-267 (445)
23 1p22_A F-BOX/WD-repeat protein 98.8 7.7E-08 2.6E-12 89.5 13.4 44 8-51 6-53 (435)
24 3l2o_B F-box only protein 4; s 97.9 2.1E-06 7.1E-11 73.6 1.6 43 10-52 2-44 (312)
25 2ast_B S-phase kinase-associat 97.7 1.4E-05 4.8E-10 71.4 2.8 44 9-52 5-48 (336)
26 2p1m_B Transport inhibitor res 97.4 4.6E-05 1.6E-09 73.6 2.4 39 8-46 1-40 (594)
27 3dsm_A Uncharacterized protein 96.5 0.36 1.2E-05 42.3 20.9 183 120-344 16-217 (328)
28 3mbr_X Glutamine cyclotransfer 96.3 0.38 1.3E-05 40.3 17.8 151 158-344 32-184 (243)
29 3ogk_B Coronatine-insensitive 96.3 0.0011 3.9E-08 63.7 1.8 34 14-47 14-48 (592)
30 3g4e_A Regucalcin; six bladed 96.2 0.51 1.7E-05 40.6 18.8 207 110-359 24-248 (297)
31 3jrp_A Fusion protein of prote 96.2 0.59 2E-05 41.0 19.4 190 119-340 31-241 (379)
32 1l0q_A Surface layer protein; 96.1 0.6 2.1E-05 41.5 18.6 187 112-344 3-194 (391)
33 3u4y_A Uncharacterized protein 96.0 0.66 2.3E-05 40.1 19.6 191 110-342 9-210 (331)
34 1l0q_A Surface layer protein; 96.0 0.78 2.7E-05 40.7 21.8 217 76-343 12-237 (391)
35 3nol_A Glutamine cyclotransfer 95.9 0.48 1.6E-05 40.1 16.0 151 158-344 54-206 (262)
36 3hfq_A Uncharacterized protein 95.9 0.82 2.8E-05 39.9 19.3 245 78-347 20-280 (347)
37 4aez_A CDC20, WD repeat-contai 95.4 1.2 4.2E-05 39.9 18.1 135 120-284 112-248 (401)
38 3hfq_A Uncharacterized protein 95.4 1.3 4.3E-05 38.7 23.1 237 76-346 63-326 (347)
39 3dsm_A Uncharacterized protein 95.2 1.4 4.9E-05 38.3 22.5 228 76-343 17-257 (328)
40 3mbr_X Glutamine cyclotransfer 95.2 0.96 3.3E-05 37.8 15.0 139 75-230 42-183 (243)
41 3jro_A Fusion protein of prote 95.1 1 3.4E-05 44.6 17.5 190 119-340 29-239 (753)
42 3u4y_A Uncharacterized protein 95.0 1.5 5.3E-05 37.7 20.9 246 77-357 63-322 (331)
43 2z2n_A Virginiamycin B lyase; 94.9 1.5 5.1E-05 37.0 23.4 217 77-342 79-298 (299)
44 3no2_A Uncharacterized protein 94.8 1.6 5.6E-05 37.1 16.6 183 111-342 5-198 (276)
45 1ri6_A Putative isomerase YBHE 94.8 1.7 6E-05 37.3 20.9 219 107-358 91-329 (343)
46 3q7m_A Lipoprotein YFGL, BAMB; 94.8 2 6.9E-05 38.0 24.7 215 77-344 64-303 (376)
47 2qc5_A Streptogramin B lactona 94.8 1.6 5.5E-05 36.8 20.7 195 106-345 26-223 (300)
48 2iwa_A Glutamine cyclotransfer 94.6 1.3 4.3E-05 37.7 14.5 152 158-344 33-186 (266)
49 3nol_A Glutamine cyclotransfer 94.3 1.5 5E-05 37.1 14.0 138 76-230 65-205 (262)
50 1rwi_B Serine/threonine-protei 94.3 2 6.9E-05 35.7 20.5 196 106-345 30-228 (270)
51 2iwa_A Glutamine cyclotransfer 94.2 2.3 7.9E-05 36.1 16.1 139 75-229 43-184 (266)
52 2qc5_A Streptogramin B lactona 94.1 2.3 7.8E-05 35.8 23.9 222 76-345 41-265 (300)
53 3vgz_A Uncharacterized protein 94.1 2.6 9E-05 36.4 26.2 226 77-344 70-308 (353)
54 3nok_A Glutaminyl cyclase; bet 93.8 1.9 6.3E-05 36.6 13.6 137 77-230 76-214 (268)
55 3dwl_C Actin-related protein 2 93.2 2 6.8E-05 37.8 14.0 144 116-283 28-176 (377)
56 1ri6_A Putative isomerase YBHE 93.2 3.7 0.00013 35.2 21.3 208 108-349 46-274 (343)
57 1gxr_A ESG1, transducin-like e 92.7 4.2 0.00014 34.7 19.4 189 108-343 106-300 (337)
58 3bg1_A Protein SEC13 homolog; 92.7 4.4 0.00015 34.8 17.5 113 109-230 23-141 (316)
59 1p22_A F-BOX/WD-repeat protein 92.6 5.6 0.00019 35.9 19.8 214 77-341 154-367 (435)
60 1k8k_C P40, ARP2/3 complex 41 92.6 4.7 0.00016 35.0 19.0 138 119-283 28-172 (372)
61 4gga_A P55CDC, cell division c 92.6 5.5 0.00019 35.8 18.5 148 108-285 114-262 (420)
62 1rwi_B Serine/threonine-protei 92.3 4.2 0.00014 33.7 23.5 190 108-341 75-266 (270)
63 3sfz_A APAF-1, apoptotic pepti 92.2 8.4 0.00029 40.1 19.1 149 107-285 623-775 (1249)
64 1q7f_A NHL, brain tumor CG1071 92.1 4.7 0.00016 33.8 21.0 150 107-284 128-280 (286)
65 3q7m_A Lipoprotein YFGL, BAMB; 92.1 5.9 0.0002 34.9 21.5 198 109-344 52-265 (376)
66 3m0c_C LDL receptor, low-densi 92.0 10 0.00036 37.6 23.8 191 109-340 434-633 (791)
67 3ei3_B DNA damage-binding prot 92.0 6 0.00021 34.7 22.0 181 120-340 95-283 (383)
68 4a11_B DNA excision repair pro 91.9 3.2 0.00011 36.6 13.6 195 119-342 64-279 (408)
69 3bws_A Protein LP49; two-domai 91.8 6.8 0.00023 35.0 23.8 196 110-344 133-339 (433)
70 2z2n_A Virginiamycin B lyase; 91.7 5.2 0.00018 33.5 24.6 221 77-345 37-260 (299)
71 1erj_A Transcriptional repress 91.7 6.9 0.00024 34.8 16.2 152 108-284 132-287 (393)
72 3nok_A Glutaminyl cyclase; bet 91.5 2 6.9E-05 36.4 10.8 107 204-343 62-168 (268)
73 1gxr_A ESG1, transducin-like e 91.3 6.2 0.00021 33.5 22.2 194 108-345 60-261 (337)
74 3no2_A Uncharacterized protein 91.1 3.2 0.00011 35.2 12.1 144 158-338 6-154 (276)
75 1npe_A Nidogen, entactin; glyc 91.0 6.1 0.00021 32.9 23.8 192 107-343 44-242 (267)
76 1n7d_A LDL receptor, low-densi 90.6 13 0.00043 36.4 17.2 199 106-344 413-619 (699)
77 3fm0_A Protein CIAO1; WDR39,SG 90.6 8.1 0.00028 33.6 18.2 160 109-294 26-190 (345)
78 3fm0_A Protein CIAO1; WDR39,SG 90.6 5.3 0.00018 34.8 13.5 152 159-344 30-186 (345)
79 4e54_B DNA damage-binding prot 90.2 10 0.00035 34.1 18.4 109 110-228 131-242 (435)
80 3i2n_A WD repeat-containing pr 90.1 8.4 0.00029 33.1 17.6 98 119-227 137-244 (357)
81 4aow_A Guanine nucleotide-bind 89.8 8.6 0.00029 32.8 20.7 186 120-341 149-339 (340)
82 2p4o_A Hypothetical protein; p 89.1 9.9 0.00034 32.5 21.7 199 109-344 41-246 (306)
83 2aq5_A Coronin-1A; WD40 repeat 88.9 12 0.0004 33.2 22.9 206 110-347 93-309 (402)
84 2pm7_B Protein transport prote 88.9 9.8 0.00033 32.2 20.3 200 109-340 19-239 (297)
85 3mkq_A Coatomer beta'-subunit; 88.9 19 0.00063 35.3 20.3 138 119-286 33-174 (814)
86 3lrv_A PRE-mRNA-splicing facto 88.2 12 0.00041 32.3 21.6 155 110-290 138-299 (343)
87 3ow8_A WD repeat-containing pr 87.9 12 0.00042 32.1 20.4 187 109-341 90-281 (321)
88 3v9f_A Two-component system se 87.6 23 0.00078 34.9 22.0 199 109-346 416-618 (781)
89 1got_B GT-beta; complex (GTP-b 87.3 14 0.00047 31.9 19.6 191 109-342 65-260 (340)
90 3i2n_A WD repeat-containing pr 87.2 13 0.00045 31.7 16.0 104 120-228 43-150 (357)
91 2p4o_A Hypothetical protein; p 87.0 8.8 0.0003 32.8 12.2 106 206-340 42-148 (306)
92 3jrp_A Fusion protein of prote 87.0 14 0.00048 31.8 16.5 155 119-296 123-299 (379)
93 3v9f_A Two-component system se 87.0 25 0.00085 34.6 18.3 220 77-339 428-656 (781)
94 3jro_A Fusion protein of prote 86.9 15 0.0005 36.1 15.0 203 111-347 67-294 (753)
95 2dg1_A DRP35, lactonase; beta 86.9 14 0.00047 31.6 20.6 204 108-345 53-269 (333)
96 3dwl_C Actin-related protein 2 86.8 15 0.00051 31.9 15.2 240 77-349 34-291 (377)
97 4ery_A WD repeat-containing pr 85.9 15 0.00051 31.0 20.7 181 119-343 43-227 (312)
98 2ovr_B FBW7, F-BOX/WD repeat p 85.4 20 0.00069 32.1 23.3 187 106-343 165-352 (445)
99 1r5m_A SIR4-interacting protei 85.4 18 0.00063 31.7 19.4 194 108-343 117-323 (425)
100 3sfz_A APAF-1, apoptotic pepti 85.1 7.9 0.00027 40.3 12.6 178 119-342 981-1161(1249)
101 2hqs_A Protein TOLB; TOLB, PAL 85.0 21 0.00072 32.0 26.9 187 121-349 203-397 (415)
102 4g56_B MGC81050 protein; prote 84.5 20 0.00068 31.3 19.5 190 107-340 147-344 (357)
103 4ggc_A P55CDC, cell division c 83.9 16 0.00054 30.7 12.3 139 119-284 170-315 (318)
104 1yfq_A Cell cycle arrest prote 83.9 19 0.00065 30.6 18.7 144 113-285 71-226 (342)
105 3hrp_A Uncharacterized protein 83.7 24 0.00083 31.6 20.7 217 105-346 136-361 (409)
106 3bws_A Protein LP49; two-domai 83.5 24 0.0008 31.3 23.3 108 110-230 223-338 (433)
107 2pm9_A Protein WEB1, protein t 83.4 23 0.00078 31.1 15.9 196 111-341 126-339 (416)
108 2kwv_A RAD30 homolog B, DNA po 83.3 1.1 3.8E-05 26.1 2.9 25 5-29 13-37 (48)
109 3e5z_A Putative gluconolactona 83.3 19 0.00065 30.1 19.6 191 113-345 42-252 (296)
110 3v64_C Agrin; beta propeller, 82.7 24 0.00082 30.9 24.6 190 108-340 82-276 (349)
111 3v65_B Low-density lipoprotein 81.4 29 0.00098 30.9 26.3 191 108-340 125-319 (386)
112 1k8k_C P40, ARP2/3 complex 41 80.9 26 0.00089 30.1 20.5 237 76-350 30-287 (372)
113 1pjx_A Dfpase, DIISOPROPYLFLUO 79.6 26 0.0009 29.3 17.3 186 120-341 45-258 (314)
114 3mmy_A MRNA export factor; mRN 79.6 28 0.00096 29.6 16.8 104 111-228 54-162 (368)
115 3k26_A Polycomb protein EED; W 78.9 29 0.001 29.5 21.7 66 110-180 127-194 (366)
116 3sov_A LRP-6, low-density lipo 78.8 31 0.0011 29.7 21.5 188 109-341 45-240 (318)
117 4ggc_A P55CDC, cell division c 78.5 28 0.00096 29.0 14.1 66 108-180 34-100 (318)
118 3e5z_A Putative gluconolactona 78.5 28 0.00096 29.0 23.7 216 77-345 51-292 (296)
119 3f3f_A Nucleoporin SEH1; struc 78.3 29 0.00099 29.1 15.5 33 258-295 316-348 (351)
120 2fp8_A Strictosidine synthase; 78.3 31 0.0011 29.4 18.6 197 110-341 91-315 (322)
121 3tc9_A Hypothetical hydrolase; 78.1 21 0.00071 32.4 11.3 116 200-342 139-260 (430)
122 1q7f_A NHL, brain tumor CG1071 78.0 28 0.00097 28.8 23.5 190 108-339 86-280 (286)
123 4a11_B DNA excision repair pro 77.2 36 0.0012 29.5 18.3 97 119-227 120-219 (408)
124 3bg1_A Protein SEC13 homolog; 77.2 33 0.0011 29.1 14.4 34 258-296 272-305 (316)
125 3o4h_A Acylamino-acid-releasin 77.0 39 0.0013 31.6 13.4 104 112-230 124-231 (582)
126 1nir_A Nitrite reductase; hemo 76.5 50 0.0017 30.9 18.4 213 111-345 292-520 (543)
127 4g56_B MGC81050 protein; prote 76.4 38 0.0013 29.4 16.4 106 109-228 104-215 (357)
128 2dg1_A DRP35, lactonase; beta 76.0 35 0.0012 28.9 13.9 149 158-339 57-213 (333)
129 2aq5_A Coronin-1A; WD40 repeat 75.8 41 0.0014 29.5 20.4 146 117-283 53-206 (402)
130 2ad6_A Methanol dehydrogenase 75.6 26 0.00088 33.2 11.6 122 200-344 56-192 (571)
131 3v7d_B Cell division control p 75.5 45 0.0015 29.8 21.2 105 206-344 321-426 (464)
132 2vdu_B TRNA (guanine-N(7)-)-me 75.3 46 0.0016 29.8 24.8 111 108-228 158-273 (450)
133 2pm9_A Protein WEB1, protein t 75.1 42 0.0014 29.3 17.5 150 111-285 178-338 (416)
134 1jmx_B Amine dehydrogenase; ox 74.5 38 0.0013 28.6 21.9 140 76-229 21-178 (349)
135 4gga_A P55CDC, cell division c 74.4 37 0.0013 30.1 12.0 102 159-285 291-396 (420)
136 1vyh_C Platelet-activating fac 74.0 47 0.0016 29.4 21.1 143 110-283 119-264 (410)
137 4e54_B DNA damage-binding prot 74.0 49 0.0017 29.5 14.6 144 159-340 134-283 (435)
138 4ery_A WD repeat-containing pr 73.2 40 0.0014 28.2 18.5 151 108-283 158-311 (312)
139 3g4e_A Regucalcin; six bladed 73.0 15 0.0005 31.1 8.5 27 206-232 24-50 (297)
140 4a0p_A LRP6, LRP-6, low-densit 72.7 69 0.0023 30.7 24.0 190 107-340 45-238 (628)
141 1kb0_A Quinohemoprotein alcoho 72.7 29 0.001 33.6 11.4 123 200-345 71-207 (677)
142 2pm7_B Protein transport prote 72.6 41 0.0014 28.1 19.1 202 111-348 67-295 (297)
143 2ad6_A Methanol dehydrogenase 72.1 61 0.0021 30.6 13.3 112 109-231 61-192 (571)
144 2ojh_A Uncharacterized protein 71.7 39 0.0013 27.5 22.9 223 77-346 23-265 (297)
145 1nir_A Nitrite reductase; hemo 71.6 66 0.0023 30.0 20.7 201 108-344 146-360 (543)
146 1r5m_A SIR4-interacting protei 71.6 51 0.0017 28.7 17.7 96 119-228 169-280 (425)
147 3iz6_a 40S ribosomal protein R 70.6 54 0.0018 28.6 20.8 189 119-340 178-376 (380)
148 4aez_A CDC20, WD repeat-contai 70.3 56 0.0019 28.7 24.4 221 77-345 114-342 (401)
149 1qks_A Cytochrome CD1 nitrite 70.2 74 0.0025 30.0 19.2 200 110-344 166-378 (567)
150 3s94_A LRP-6, low-density lipo 70.1 78 0.0027 30.2 19.3 194 106-341 47-245 (619)
151 3ow8_A WD repeat-containing pr 69.7 51 0.0018 28.0 22.8 186 107-337 130-319 (321)
152 1npe_A Nidogen, entactin; glyc 69.7 45 0.0015 27.3 17.4 111 106-227 86-199 (267)
153 3ei3_B DNA damage-binding prot 69.6 55 0.0019 28.3 19.8 176 77-286 97-284 (383)
154 1yiq_A Quinohemoprotein alcoho 69.4 40 0.0014 32.7 11.5 117 200-344 64-199 (689)
155 3v65_B Low-density lipoprotein 69.0 62 0.0021 28.6 21.4 178 121-341 96-279 (386)
156 3vl1_A 26S proteasome regulato 68.8 60 0.002 28.4 21.7 107 108-229 106-215 (420)
157 3gre_A Serine/threonine-protei 68.3 64 0.0022 28.5 15.9 107 207-342 182-295 (437)
158 4gqb_B Methylosome protein 50; 68.2 59 0.002 28.1 20.6 190 108-341 136-333 (344)
159 1got_B GT-beta; complex (GTP-b 68.2 56 0.0019 27.9 23.0 191 108-341 106-303 (340)
160 3f3f_A Nucleoporin SEH1; struc 68.0 52 0.0018 27.4 18.1 28 320-347 318-346 (351)
161 3scy_A Hypothetical bacterial 67.9 58 0.002 27.9 22.6 240 78-348 31-302 (361)
162 1ijq_A LDL receptor, low-densi 67.8 57 0.002 27.8 28.1 194 107-341 38-240 (316)
163 3k26_A Polycomb protein EED; W 67.6 56 0.0019 27.7 21.0 139 120-283 43-191 (366)
164 1kv9_A Type II quinohemoprotei 67.4 37 0.0012 32.8 10.8 123 200-344 60-194 (668)
165 3zwl_B Eukaryotic translation 67.3 57 0.002 27.6 18.9 57 119-181 52-108 (369)
166 3mkq_A Coatomer beta'-subunit; 67.0 96 0.0033 30.1 22.8 147 108-283 106-258 (814)
167 3sjl_D Methylamine dehydrogena 66.5 71 0.0024 28.5 12.4 122 206-344 237-368 (386)
168 3lrv_A PRE-mRNA-splicing facto 66.5 61 0.0021 27.6 20.2 154 104-285 88-245 (343)
169 2ghs_A AGR_C_1268P; regucalcin 65.9 42 0.0015 28.7 10.1 26 207-232 61-86 (326)
170 3mmy_A MRNA export factor; mRN 65.7 61 0.0021 27.4 17.5 68 108-180 95-162 (368)
171 4a0p_A LRP6, LRP-6, low-densit 65.5 97 0.0033 29.6 23.0 179 121-341 15-199 (628)
172 3vgz_A Uncharacterized protein 65.2 63 0.0021 27.3 22.5 189 120-344 68-267 (353)
173 4hw6_A Hypothetical protein, I 65.1 58 0.002 29.4 11.1 117 199-342 140-262 (433)
174 2ynn_A Coatomer subunit beta'; 64.5 62 0.0021 27.0 21.5 148 108-283 106-258 (304)
175 1nr0_A Actin interacting prote 64.5 96 0.0033 29.2 15.3 150 108-283 199-354 (611)
176 3scy_A Hypothetical bacterial 64.4 68 0.0023 27.5 23.1 118 206-346 221-346 (361)
177 1kv9_A Type II quinohemoprotei 64.3 62 0.0021 31.2 11.7 111 109-231 65-194 (668)
178 1qks_A Cytochrome CD1 nitrite 64.3 53 0.0018 31.0 11.0 109 206-344 166-280 (567)
179 1erj_A Transcriptional repress 63.5 77 0.0026 27.7 12.3 107 206-342 134-241 (393)
180 1yiq_A Quinohemoprotein alcoho 63.5 1E+02 0.0035 29.8 13.2 112 109-231 69-199 (689)
181 4gqb_B Methylosome protein 50; 63.3 73 0.0025 27.5 15.5 59 168-230 102-162 (344)
182 2ynn_A Coatomer subunit beta'; 62.8 67 0.0023 26.8 19.7 137 119-285 33-173 (304)
183 1jmx_B Amine dehydrogenase; ox 62.2 70 0.0024 26.9 11.9 25 206-230 10-34 (349)
184 3p5b_L Low density lipoprotein 61.8 87 0.003 27.8 27.0 192 108-340 121-321 (400)
185 3zwl_B Eukaryotic translation 61.8 73 0.0025 26.9 22.0 153 109-284 84-249 (369)
186 3gre_A Serine/threonine-protei 59.9 91 0.0031 27.4 15.2 56 168-229 191-248 (437)
187 3odt_A Protein DOA1; ubiquitin 59.0 43 0.0015 27.7 8.7 66 205-286 27-92 (313)
188 3m0c_C LDL receptor, low-densi 58.6 1.5E+02 0.005 29.4 21.6 118 200-345 473-595 (791)
189 2xyi_A Probable histone-bindin 57.3 1E+02 0.0035 27.3 16.2 104 206-339 243-353 (430)
190 1flg_A Protein (quinoprotein e 56.8 73 0.0025 30.1 10.5 31 200-231 62-94 (582)
191 3tc9_A Hypothetical hydrolase; 56.3 1.1E+02 0.0039 27.4 16.1 148 109-284 148-301 (430)
192 3azo_A Aminopeptidase; POP fam 55.7 1.4E+02 0.0047 28.2 19.4 193 121-346 161-376 (662)
193 2hes_X YDR267CP; beta-propelle 55.6 95 0.0032 26.3 16.1 147 168-345 33-190 (330)
194 1sq9_A Antiviral protein SKI8; 55.1 1E+02 0.0035 26.5 20.3 214 112-342 82-325 (397)
195 4hw6_A Hypothetical protein, I 55.0 1.2E+02 0.0041 27.3 18.0 207 110-346 152-380 (433)
196 1pgu_A Actin interacting prote 55.0 1.3E+02 0.0045 27.7 21.7 111 209-344 175-288 (615)
197 4a2l_A BT_4663, two-component 54.8 1.6E+02 0.0055 28.7 24.0 229 77-346 378-621 (795)
198 2vdu_B TRNA (guanine-N(7)-)-me 54.7 1.2E+02 0.004 27.1 20.2 110 206-343 160-275 (450)
199 1vyh_C Platelet-activating fac 54.0 1.2E+02 0.0039 26.8 21.1 61 207-283 308-368 (410)
200 3odt_A Protein DOA1; ubiquitin 53.7 91 0.0031 25.5 19.7 134 119-281 37-171 (313)
201 1pgu_A Actin interacting prote 53.7 1.4E+02 0.0047 27.6 21.5 136 168-340 466-615 (615)
202 2hz6_A Endoplasmic reticulum t 53.6 6.8 0.00023 34.7 2.6 29 202-231 5-35 (369)
203 3azo_A Aminopeptidase; POP fam 53.5 1.5E+02 0.0051 27.9 18.0 208 110-347 90-333 (662)
204 3c5m_A Oligogalacturonate lyas 52.0 1.1E+02 0.0039 26.1 15.1 99 121-231 216-334 (396)
205 2pbi_B Guanine nucleotide-bind 51.5 1.2E+02 0.004 26.1 20.5 139 119-283 174-314 (354)
206 2ghs_A AGR_C_1268P; regucalcin 51.4 1.1E+02 0.0038 25.9 19.4 194 109-345 59-266 (326)
207 3vl1_A 26S proteasome regulato 50.2 1.3E+02 0.0043 26.2 24.4 104 206-339 258-365 (420)
208 3p5b_L Low density lipoprotein 49.1 1.4E+02 0.0049 26.4 21.7 184 121-345 92-283 (400)
209 1flg_A Protein (quinoprotein e 49.0 60 0.0021 30.7 8.6 79 169-268 466-548 (582)
210 1n7d_A LDL receptor, low-densi 48.9 1.9E+02 0.0066 27.9 17.5 107 109-227 463-572 (699)
211 1ijq_A LDL receptor, low-densi 48.5 1.2E+02 0.0043 25.6 22.6 182 121-345 10-201 (316)
212 3dr2_A Exported gluconolactona 47.3 1.2E+02 0.0042 25.2 17.0 193 113-346 59-274 (305)
213 1sq9_A Antiviral protein SKI8; 47.1 1.4E+02 0.0047 25.6 18.1 118 106-229 193-325 (397)
214 3v64_C Agrin; beta propeller, 46.5 1.4E+02 0.0049 25.7 22.5 181 121-343 53-238 (349)
215 3dr2_A Exported gluconolactona 46.0 70 0.0024 26.8 7.9 110 208-345 58-184 (305)
216 1w6s_A Methanol dehydrogenase 45.9 72 0.0025 30.3 8.5 77 170-268 454-535 (599)
217 3ott_A Two-component system se 45.5 2.2E+02 0.0075 27.6 17.1 116 106-233 478-593 (758)
218 3iz6_a 40S ribosomal protein R 45.0 1.5E+02 0.0052 25.6 18.6 153 110-283 217-374 (380)
219 1kb0_A Quinohemoprotein alcoho 44.8 2.2E+02 0.0075 27.4 16.3 59 170-231 88-154 (677)
220 1w6s_A Methanol dehydrogenase 44.5 2.1E+02 0.0072 27.1 16.5 60 169-231 73-147 (599)
221 3dm0_A Maltose-binding peripla 44.3 2.2E+02 0.0074 27.1 19.0 194 107-343 438-636 (694)
222 3fvz_A Peptidyl-glycine alpha- 43.9 1.5E+02 0.005 25.1 21.7 209 107-340 98-323 (329)
223 2xyi_A Probable histone-bindin 43.8 1.7E+02 0.0058 25.8 15.7 198 115-343 198-414 (430)
224 3fvz_A Peptidyl-glycine alpha- 43.6 1.5E+02 0.0051 25.1 24.7 155 121-289 69-231 (329)
225 2ojh_A Uncharacterized protein 43.1 1.3E+02 0.0044 24.2 20.4 185 119-347 20-214 (297)
226 2pbi_B Guanine nucleotide-bind 41.4 1.7E+02 0.0057 25.0 22.5 195 105-341 112-317 (354)
227 4aow_A Guanine nucleotide-bind 40.6 1.6E+02 0.0053 24.5 19.3 148 107-283 94-245 (340)
228 1yfq_A Cell cycle arrest prote 40.3 1.6E+02 0.0055 24.5 18.4 94 119-226 31-131 (342)
229 4a2l_A BT_4663, two-component 40.1 2.7E+02 0.0093 27.1 23.7 204 107-346 364-578 (795)
230 1nr0_A Actin interacting prote 39.4 2.4E+02 0.0083 26.3 20.3 202 107-344 67-275 (611)
231 2hqs_A Protein TOLB; TOLB, PAL 39.2 2E+02 0.0069 25.3 21.2 139 77-232 204-350 (415)
232 1ddw_A GLGF-domain protein hom 36.5 39 0.0013 24.5 3.9 40 121-163 11-51 (120)
233 3frx_A Guanine nucleotide-bind 34.0 2.1E+02 0.007 23.9 16.2 152 107-283 73-226 (319)
234 2bkl_A Prolyl endopeptidase; m 34.0 3.2E+02 0.011 26.1 20.8 186 122-346 203-404 (695)
235 1egx_A VAsp, vasodilator-stimu 33.6 43 0.0015 24.1 3.7 43 122-164 12-54 (115)
236 4h5i_A Guanine nucleotide-exch 33.5 2.3E+02 0.0079 24.3 17.7 163 108-294 185-358 (365)
237 4h5i_A Guanine nucleotide-exch 32.5 2.4E+02 0.0082 24.2 19.4 193 107-340 141-344 (365)
238 3amr_A 3-phytase; beta-propell 28.6 3E+02 0.01 24.1 15.0 105 112-225 88-209 (355)
239 3sov_A LRP-6, low-density lipo 27.5 2.8E+02 0.0097 23.5 18.5 147 158-345 48-203 (318)
240 2khu_A Immunoglobulin G-bindin 27.1 46 0.0016 22.9 2.6 22 5-26 65-86 (108)
241 2fp8_A Strictosidine synthase; 27.1 2.7E+02 0.0094 23.2 13.2 107 111-227 197-314 (322)
242 3amr_A 3-phytase; beta-propell 27.0 3.2E+02 0.011 23.9 17.7 141 168-338 98-262 (355)
243 2dk7_A Transcription elongatio 26.9 34 0.0012 22.3 1.9 13 120-132 29-41 (73)
244 1evh_A WH1 domain, protein (ME 25.7 1.4E+02 0.0049 21.1 5.3 42 121-163 11-52 (112)
245 2oaj_A Protein SNI1; WD40 repe 24.1 5.4E+02 0.019 25.6 19.6 94 119-229 37-132 (902)
246 3q6k_A 43.2 kDa salivary prote 22.4 3.8E+02 0.013 23.7 8.6 83 258-345 96-197 (381)
247 3kya_A Putative phosphatase; s 22.2 4.6E+02 0.016 24.1 13.5 109 110-225 151-277 (496)
248 1pjx_A Dfpase, DIISOPROPYLFLUO 20.4 3.5E+02 0.012 22.0 20.8 223 77-340 47-300 (314)
249 3c75_H MADH, methylamine dehyd 20.3 4.7E+02 0.016 23.4 10.1 27 317-343 186-213 (426)
250 3vu4_A KMHSV2; beta-propeller 20.2 4E+02 0.014 22.5 20.7 60 110-179 70-129 (355)
No 1
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.93 E-value=8.2e-24 Score=189.14 Aligned_cols=256 Identities=16% Similarity=0.118 Sum_probs=188.3
Q ss_pred eEEEEecCCCCceeeeeeCCCCCeEeecCCcCCCCCCceEEEecCCceEEEecCC----CCeEEEEeCCcCceeeccCCC
Q 018005 65 CFILLSHPQCYDQYPLYDSTHGTWRRLSLPYSLLLPSAATLLSSSKGLLCFSLPS----SSSFLVCNLVTLSSRTIDFPT 140 (362)
Q Consensus 65 ~~l~~~~~~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~~s~~Gll~~~~~~----~~~~~v~NP~t~~w~~lP~~~ 140 (362)
.++++.+......+..||+..++|..++ .+|.++....++..+|.|++.++. .+.+.+|||.|++|..+++++
T Consensus 13 ~l~~~GG~~~~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p 89 (306)
T 3ii7_A 13 YRIALFGGSQPQSCRYFNPKDYSWTDIR---CPFEKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPP 89 (306)
T ss_dssp EEEEEECCSSTTSEEEEETTTTEEEECC---CCSCCCBSCEEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCS
T ss_pred eEEEEeCCCCCceEEEecCCCCCEecCC---CCCcccceeEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCC
Confidence 3555554433567889999999999986 233445555556678877777653 358999999999999999988
Q ss_pred CCCccceEEEEeCCCceEEEEEeeec----CCCeEEEEeCCCCcccccccCCCCccccccCCCcccEEECCEEEEEecC-
Q 018005 141 YPFDFELLTLVSTPSGYKIFMLFAKS----FPNYAFVYDSTDQSWSKFDIDGFPSMILSQSSHQEGVFYKGSLYFTTPE- 215 (362)
Q Consensus 141 ~~~~~~~~~~~~~~~~ykv~~~~~~~----~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~~~~v~~~G~ly~~~~~- 215 (362)
.++.....+.... +++++||.. ....+++||+.+++|+..+ .+|. .+..+..+.++|++|++++.
T Consensus 90 ~~r~~~~~~~~~~----~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~--~~p~----~r~~~~~~~~~~~iyv~GG~~ 159 (306)
T 3ii7_A 90 TPRDSLAACAAEG----KIYTSGGSEVGNSALYLFECYDTRTESWHTKP--SMLT----QRCSHGMVEANGLIYVCGGSL 159 (306)
T ss_dssp SCCBSCEEEEETT----EEEEECCBBTTBSCCCCEEEEETTTTEEEEEC--CCSS----CCBSCEEEEETTEEEEECCEE
T ss_pred ccccceeEEEECC----EEEEECCCCCCCcEeeeEEEEeCCCCceEeCC--CCcC----CcceeEEEEECCEEEEECCCC
Confidence 7776655554432 788888864 2348999999999999998 6765 34567788899999999862
Q ss_pred --------CcEEEEEEcCCCeeecCCCCCcccccCCCCcccccceeecccCCCeEEEEEEeecCCccceEEEEEECCCC-
Q 018005 216 --------PFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGISTTMKLWELGCGG- 286 (362)
Q Consensus 216 --------~~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~L~vv~~~~~~~~~~~i~vw~l~~~~- 286 (362)
...+.+||+.+++|+.+. + +|..+..+.++. .+|+||++||.........+++| |...
T Consensus 160 ~~~~~~~~~~~~~~yd~~~~~W~~~~-~-------~p~~r~~~~~~~---~~~~i~v~GG~~~~~~~~~~~~y--d~~~~ 226 (306)
T 3ii7_A 160 GNNVSGRVLNSCEVYDPATETWTELC-P-------MIEARKNHGLVF---VKDKIFAVGGQNGLGGLDNVEYY--DIKLN 226 (306)
T ss_dssp SCTTTCEECCCEEEEETTTTEEEEEC-C-------CSSCCBSCEEEE---ETTEEEEECCEETTEEBCCEEEE--ETTTT
T ss_pred CCCCcccccceEEEeCCCCCeEEECC-C-------ccchhhcceEEE---ECCEEEEEeCCCCCCCCceEEEe--eCCCC
Confidence 346899999999999874 4 676666677764 89999999997643333455555 5444
Q ss_pred CEEEEecccHHHHHHhhhccccCCccEEEEeeCCEEEEEeec-----CCeEEEEECCCCceEEcCCCCCCCCCCCcc
Q 018005 287 NWIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYT-----WPEILYYNVARRTWHWLPSCPSLPHKWSCG 358 (362)
Q Consensus 287 ~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-----~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~ 358 (362)
+|+++..+|. ......++..++.||+.++. ...+.+||+++++|+.++.+|.+....+|+
T Consensus 227 ~W~~~~~~p~------------~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~ 291 (306)
T 3ii7_A 227 EWKMVSPMPW------------KGVTVKCAAVGSIVYVLAGFQGVGRLGHILEYNTETDKWVANSKVRAFPVTSCLI 291 (306)
T ss_dssp EEEECCCCSC------------CBSCCEEEEETTEEEEEECBCSSSBCCEEEEEETTTTEEEEEEEEECCSCTTCEE
T ss_pred cEEECCCCCC------------CccceeEEEECCEEEEEeCcCCCeeeeeEEEEcCCCCeEEeCCCcccccceeEEE
Confidence 4999988762 11223455568888988753 356999999999999999988877666654
No 2
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.92 E-value=6.8e-23 Score=183.39 Aligned_cols=256 Identities=16% Similarity=0.128 Sum_probs=185.1
Q ss_pred EEEEecC--CCCceeeeeeCCCCCeEeecCCcCCCCCCceEEEecCCceEEEecCC----C-----CeEEEEeCCcCcee
Q 018005 66 FILLSHP--QCYDQYPLYDSTHGTWRRLSLPYSLLLPSAATLLSSSKGLLCFSLPS----S-----SSFLVCNLVTLSSR 134 (362)
Q Consensus 66 ~l~~~~~--~~~~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~~s~~Gll~~~~~~----~-----~~~~v~NP~t~~w~ 134 (362)
++++.+. .....+..||+..++|..++ .+|.++....++..+|.|++.++. . +.+.+|||.|++|.
T Consensus 27 i~v~GG~~~~~~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~ 103 (308)
T 1zgk_A 27 IYTAGGYFRQSLSYLEAYNPSNGTWLRLA---DLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWS 103 (308)
T ss_dssp EEEECCBSSSBCCCEEEEETTTTEEEECC---CCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEE
T ss_pred EEEEeCcCCCCcceEEEEcCCCCeEeECC---CCCcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCeEe
Confidence 4555431 23346789999999999985 333344444455667877777653 1 46899999999999
Q ss_pred eccCCCCCCccceEEEEeCCCceEEEEEeeecC---CCeEEEEeCCCCcccccccCCCCccccccCCCcccEEECCEEEE
Q 018005 135 TIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSF---PNYAFVYDSTDQSWSKFDIDGFPSMILSQSSHQEGVFYKGSLYF 211 (362)
Q Consensus 135 ~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~---~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~~~~v~~~G~ly~ 211 (362)
.+++++.++.....+.... +|+++||... ...+++||+.+++|+..+ .+|. .+..+..+.++|++|+
T Consensus 104 ~~~~~p~~r~~~~~~~~~~----~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~--~~p~----~r~~~~~~~~~~~iyv 173 (308)
T 1zgk_A 104 PCAPMSVPRNRIGVGVIDG----HIYAVGGSHGCIHHNSVERYEPERDEWHLVA--PMLT----RRIGVGVAVLNRLLYA 173 (308)
T ss_dssp ECCCCSSCCBTCEEEEETT----EEEEECCEETTEECCCEEEEETTTTEEEECC--CCSS----CCBSCEEEEETTEEEE
T ss_pred ECCCCCcCccccEEEEECC----EEEEEcCCCCCcccccEEEECCCCCeEeECC--CCCc----cccceEEEEECCEEEE
Confidence 9999888776665554432 7888887543 348999999999999998 6665 3456778888999999
Q ss_pred EecC-----CcEEEEEEcCCCeeecCCCCCcccccCCCCcccccceeecccCCCeEEEEEEeecCCccceEEEEEECCCC
Q 018005 212 TTPE-----PFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGISTTMKLWELGCGG 286 (362)
Q Consensus 212 ~~~~-----~~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~L~vv~~~~~~~~~~~i~vw~l~~~~ 286 (362)
+++. ...+.+||+.+++|+.+. + +|..+..+.++. .+|+||++|+.........+.+|++ ..+
T Consensus 174 ~GG~~~~~~~~~~~~yd~~~~~W~~~~-~-------~p~~r~~~~~~~---~~~~iyv~GG~~~~~~~~~v~~yd~-~~~ 241 (308)
T 1zgk_A 174 VGGFDGTNRLNSAECYYPERNEWRMIT-A-------MNTIRSGAGVCV---LHNCIYAAGGYDGQDQLNSVERYDV-ETE 241 (308)
T ss_dssp ECCBCSSCBCCCEEEEETTTTEEEECC-C-------CSSCCBSCEEEE---ETTEEEEECCBCSSSBCCCEEEEET-TTT
T ss_pred EeCCCCCCcCceEEEEeCCCCeEeeCC-C-------CCCccccceEEE---ECCEEEEEeCCCCCCccceEEEEeC-CCC
Confidence 9863 246899999999999864 4 666666666664 8999999999754333445555544 234
Q ss_pred CEEEEecccHHHHHHhhhccccCCccEEEEeeCCEEEEEeec-----CCeEEEEECCCCceEEcCCCCCCCCCCCcc
Q 018005 287 NWIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYT-----WPEILYYNVARRTWHWLPSCPSLPHKWSCG 358 (362)
Q Consensus 287 ~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-----~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~ 358 (362)
+|+++..+|.. .....++..++.||+.++. ...+++||+++++|+.++.+|.+....+|+
T Consensus 242 ~W~~~~~~p~~------------r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~ 306 (308)
T 1zgk_A 242 TWTFVAPMKHR------------RSALGITVHQGRIYVLGGYDGHTFLDSVECYDPDTDTWSEVTRMTSGRSGVGVA 306 (308)
T ss_dssp EEEECCCCSSC------------CBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEE
T ss_pred cEEECCCCCCC------------ccceEEEEECCEEEEEcCcCCCcccceEEEEcCCCCEEeecCCCCCCcccceeE
Confidence 49999877621 1223444567888888753 346899999999999999999887776664
No 3
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.92 E-value=2e-22 Score=179.74 Aligned_cols=244 Identities=11% Similarity=0.088 Sum_probs=177.5
Q ss_pred ceeeeeeCCCCCeEeecCCcCCCCCCceEEEecCCceEEEecCC-----CCeEEEEeCCcCceeeccCCCCCCccceEEE
Q 018005 76 DQYPLYDSTHGTWRRLSLPYSLLLPSAATLLSSSKGLLCFSLPS-----SSSFLVCNLVTLSSRTIDFPTYPFDFELLTL 150 (362)
Q Consensus 76 ~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~~s~~Gll~~~~~~-----~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~ 150 (362)
..+..||+..++|..++ .+|.++....++..+|.|++.++. .+.+.+|||.+++|..+++++.++...+.+.
T Consensus 30 ~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~ 106 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVA---ELPSRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAV 106 (302)
T ss_dssp CCEEEEETTTTEEEEEC---CCSSCCBSCEEEEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE
T ss_pred CcEEEEcCcCCcEeEcc---cCCcccccceEEEECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEE
Confidence 45788999999999985 233344444455567877777652 2478999999999999999888776665554
Q ss_pred EeCCCceEEEEEeeecCC---CeEEEEeCCCCcccccccCCCCccccccCCCcccEEECCEEEEEecC-------CcEEE
Q 018005 151 VSTPSGYKIFMLFAKSFP---NYAFVYDSTDQSWSKFDIDGFPSMILSQSSHQEGVFYKGSLYFTTPE-------PFSIV 220 (362)
Q Consensus 151 ~~~~~~ykv~~~~~~~~~---~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~~~~v~~~G~ly~~~~~-------~~~i~ 220 (362)
... +++++||.... ..+++||+.+++|+..+ .+|. .+..+..+.++|++|++++. ...+.
T Consensus 107 ~~~----~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~--~~p~----~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~ 176 (302)
T 2xn4_A 107 LNG----LLYAVGGFDGSTGLSSVEAYNIKSNEWFHVA--PMNT----RRSSVGVGVVGGLLYAVGGYDVASRQCLSTVE 176 (302)
T ss_dssp ETT----EEEEEEEECSSCEEEEEEEEETTTTEEEEEC--CCSS----CCBSCEEEEETTEEEEECCEETTTTEECCCEE
T ss_pred ECC----EEEEEcCCCCCccCceEEEEeCCCCeEeecC--CCCC----cccCceEEEECCEEEEEeCCCCCCCccccEEE
Confidence 432 78888886432 37999999999999998 6765 33567788899999999863 24689
Q ss_pred EEEcCCCeeecCCCCCcccccCCCCcccccceeecccCCCeEEEEEEeecCCccceEEEEEECCCC-CEEEEecccHHHH
Q 018005 221 RFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGISTTMKLWELGCGG-NWIEVERVPEMMC 299 (362)
Q Consensus 221 ~~D~~~~~w~~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~L~vv~~~~~~~~~~~i~vw~l~~~~-~W~~v~~~p~~~~ 299 (362)
+||+.+++|+.+. + +|..+..+.+++ .+|+||++|+.........+++| |... +|+++..+|..
T Consensus 177 ~yd~~~~~W~~~~-~-------~p~~r~~~~~~~---~~~~iyv~GG~~~~~~~~~~~~y--d~~~~~W~~~~~~~~~-- 241 (302)
T 2xn4_A 177 CYNATTNEWTYIA-E-------MSTRRSGAGVGV---LNNLLYAVGGHDGPLVRKSVEVY--DPTTNAWRQVADMNMC-- 241 (302)
T ss_dssp EEETTTTEEEEEC-C-------CSSCCBSCEEEE---ETTEEEEECCBSSSSBCCCEEEE--ETTTTEEEEECCCSSC--
T ss_pred EEeCCCCcEEECC-C-------CccccccccEEE---ECCEEEEECCCCCCcccceEEEE--eCCCCCEeeCCCCCCc--
Confidence 9999999999863 4 666666666664 89999999996543333455555 5444 49999887621
Q ss_pred HHhhhccccCCccEEEEeeCCEEEEEeecC-----CeEEEEECCCCceEEcC-CCCCCCCCCCc
Q 018005 300 RKFMSVCYHNYDHVYCFWHQGMICVCCYTW-----PEILYYNVARRTWHWLP-SCPSLPHKWSC 357 (362)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-----~~v~~yd~~~~~w~~~~-~~~~~~~~~~~ 357 (362)
.....++..++.||+.++.. ..+++||+++++|+.++ .+|.+....++
T Consensus 242 ----------r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~r~~~~~ 295 (302)
T 2xn4_A 242 ----------RRNAGVCAVNGLLYVVGGDDGSCNLASVEYYNPTTDKWTVVSSCMSTGRSYAGV 295 (302)
T ss_dssp ----------CBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECSSCCSSCCBSCEE
T ss_pred ----------cccCeEEEECCEEEEECCcCCCcccccEEEEcCCCCeEEECCcccCcccccceE
Confidence 12233455678889887532 35999999999999997 77776655443
No 4
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.91 E-value=3.7e-22 Score=179.17 Aligned_cols=238 Identities=13% Similarity=0.148 Sum_probs=172.9
Q ss_pred ceeeeeeCCCCCeEeecCCcCCCCCCceEEEecCCceEEEecCC-----C------CeEEEEeCCcCceeeccCCCCCCc
Q 018005 76 DQYPLYDSTHGTWRRLSLPYSLLLPSAATLLSSSKGLLCFSLPS-----S------SSFLVCNLVTLSSRTIDFPTYPFD 144 (362)
Q Consensus 76 ~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~~s~~Gll~~~~~~-----~------~~~~v~NP~t~~w~~lP~~~~~~~ 144 (362)
..+..|||..++|...++|. |.++....++..+|.|++.++. . ..+.+|||.|++|..+++++.++.
T Consensus 13 ~~~~~yd~~~~~W~~~~~~~--p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~ 90 (315)
T 4asc_A 13 EGAVAYDPAANECYCASLSS--QVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRC 90 (315)
T ss_dssp TEEEEEETTTTEEEEEECCC--CSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEE
T ss_pred CceEEECCCCCeEecCCCCC--CCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchh
Confidence 46789999999998755543 2345566667778866665541 1 248999999999999999887766
Q ss_pred cceEEEEeCCCceEEEEEeeec------CCCeEEEEeCCCCcccccccCCCCccccccCCCcccEEECCEEEEEecC---
Q 018005 145 FELLTLVSTPSGYKIFMLFAKS------FPNYAFVYDSTDQSWSKFDIDGFPSMILSQSSHQEGVFYKGSLYFTTPE--- 215 (362)
Q Consensus 145 ~~~~~~~~~~~~ykv~~~~~~~------~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~~~~v~~~G~ly~~~~~--- 215 (362)
...++.... +++++||.. ....+++||+.+++|+..+ .+|. .+..+..+.++|++|++++.
T Consensus 91 ~~~~~~~~~----~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~--~~p~----~r~~~~~~~~~~~iyv~GG~~~~ 160 (315)
T 4asc_A 91 LFGLGEALN----SIYVVGGREIKDGERCLDSVMCYDRLSFKWGESD--PLPY----VVYGHTVLSHMDLVYVIGGKGSD 160 (315)
T ss_dssp SCEEEEETT----EEEEECCEESSTTCCBCCCEEEEETTTTEEEECC--CCSS----CCBSCEEEEETTEEEEECCBCTT
T ss_pred ceeEEEECC----EEEEEeCCcCCCCCcccceEEEECCCCCcEeECC--CCCC----cccceeEEEECCEEEEEeCCCCC
Confidence 555544432 788888853 1348999999999999998 6765 34567788899999999875
Q ss_pred ---CcEEEEEEcCCCeeecCCCCCcccccCCCCcccccceeecccCCCeEEEEEEeecCCccceEEEEEECCCC-CEEEE
Q 018005 216 ---PFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGISTTMKLWELGCGG-NWIEV 291 (362)
Q Consensus 216 ---~~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~L~vv~~~~~~~~~~~i~vw~l~~~~-~W~~v 291 (362)
...+.+||+.+++|+.+. + +|..+..+.+++ .+|+||++||........ .+|.+|... +|+++
T Consensus 161 ~~~~~~~~~yd~~~~~W~~~~-~-------~p~~r~~~~~~~---~~~~iyv~GG~~~~~~~~--~~~~yd~~~~~W~~~ 227 (315)
T 4asc_A 161 RKCLNKMCVYDPKKFEWKELA-P-------MQTARSLFGATV---HDGRIIVAAGVTDTGLTS--SAEVYSITDNKWAPF 227 (315)
T ss_dssp SCBCCCEEEEETTTTEEEECC-C-------CSSCCBSCEEEE---ETTEEEEEEEECSSSEEE--EEEEEETTTTEEEEE
T ss_pred CcccceEEEEeCCCCeEEECC-C-------CCCchhceEEEE---ECCEEEEEeccCCCCccc--eEEEEECCCCeEEEC
Confidence 146999999999999864 4 677666667664 899999999976433333 445555554 49999
Q ss_pred ecccHHHHHHhhhccccCCccEEEEeeCCEEEEEeecC--------------CeEEEEECCCCceEEcCCCCC
Q 018005 292 ERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYTW--------------PEILYYNVARRTWHWLPSCPS 350 (362)
Q Consensus 292 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--------------~~v~~yd~~~~~w~~~~~~~~ 350 (362)
..+|.. +....++..++.||+.++.. ..+.+||+++++|+.+...|.
T Consensus 228 ~~~p~~------------r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~r 288 (315)
T 4asc_A 228 EAFPQE------------RSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGVLREIA 288 (315)
T ss_dssp CCCSSC------------CBSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEEESCSS
T ss_pred CCCCCc------------ccceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhhccCCc
Confidence 887621 12234455678888876532 348999999999999955544
No 5
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.91 E-value=8.1e-22 Score=177.19 Aligned_cols=240 Identities=14% Similarity=0.224 Sum_probs=171.6
Q ss_pred eeeeeeCCCCCeEeecCCcCCCCCCceEEEecCCceEEEecCC-----------CCeEEEEeCCcCceeeccCCCCCCcc
Q 018005 77 QYPLYDSTHGTWRRLSLPYSLLLPSAATLLSSSKGLLCFSLPS-----------SSSFLVCNLVTLSSRTIDFPTYPFDF 145 (362)
Q Consensus 77 ~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~~s~~Gll~~~~~~-----------~~~~~v~NP~t~~w~~lP~~~~~~~~ 145 (362)
.+..|||..++|...+++. +.++....++..+|.|++.++. ...+.+|||.+++|..+++++.++..
T Consensus 25 ~~~~yd~~~~~W~~~~~~~--~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~ 102 (318)
T 2woz_A 25 AAVAYDPMENECYLTALAE--QIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCL 102 (318)
T ss_dssp EEEEEETTTTEEEEEEECT--TSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCS
T ss_pred ceEEECCCCCceecccCCc--cCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccc
Confidence 4678999999998865442 2345555667778877666551 01388999999999999998887766
Q ss_pred ceEEEEeCCCceEEEEEeeecC-----CCeEEEEeCCCCcccccccCCCCccccccCCCcccEEECCEEEEEecC-----
Q 018005 146 ELLTLVSTPSGYKIFMLFAKSF-----PNYAFVYDSTDQSWSKFDIDGFPSMILSQSSHQEGVFYKGSLYFTTPE----- 215 (362)
Q Consensus 146 ~~~~~~~~~~~ykv~~~~~~~~-----~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~~~~v~~~G~ly~~~~~----- 215 (362)
.+++.... +|+++||... ...+++||+.+++|+..+ .+|. .+..+..+.++|++|++++.
T Consensus 103 ~~~~~~~~----~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~--~~p~----~r~~~~~~~~~~~iyv~GG~~~~~~ 172 (318)
T 2woz_A 103 FGLGEVDD----KIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVK--NLPI----KVYGHNVISHNGMIYCLGGKTDDKK 172 (318)
T ss_dssp CEEEEETT----EEEEEEEEBTTTCCEEEEEEEEETTTTEEEEEC--CCSS----CEESCEEEEETTEEEEECCEESSSC
T ss_pred cceEEECC----EEEEEcCccCCCCcccceEEEEeCCCCCEeECC--CCCC----cccccEEEEECCEEEEEcCCCCCCC
Confidence 55554432 7888888642 137999999999999988 6765 23567788899999999863
Q ss_pred -CcEEEEEEcCCCeeecCCCCCcccccCCCCcccccceeecccCCCeEEEEEEeecCCccceEEEEEECCC-CCEEEEec
Q 018005 216 -PFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGISTTMKLWELGCG-GNWIEVER 293 (362)
Q Consensus 216 -~~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~L~vv~~~~~~~~~~~i~vw~l~~~-~~W~~v~~ 293 (362)
...+.+||+.+++|+.+. + +|..+..+.+++ .+|+||++||.........+++| |.. ++|+++..
T Consensus 173 ~~~~~~~yd~~~~~W~~~~-~-------~p~~r~~~~~~~---~~~~iyv~GG~~~~~~~~~~~~y--d~~~~~W~~~~~ 239 (318)
T 2woz_A 173 CTNRVFIYNPKKGDWKDLA-P-------MKTPRSMFGVAI---HKGKIVIAGGVTEDGLSASVEAF--DLKTNKWEVMTE 239 (318)
T ss_dssp BCCCEEEEETTTTEEEEEC-C-------CSSCCBSCEEEE---ETTEEEEEEEEETTEEEEEEEEE--ETTTCCEEECCC
T ss_pred ccceEEEEcCCCCEEEECC-C-------CCCCcccceEEE---ECCEEEEEcCcCCCCccceEEEE--ECCCCeEEECCC
Confidence 246899999999999864 4 666666666664 89999999997643333444555 544 45999988
Q ss_pred ccHHHHHHhhhccccCCccEEEEeeCCEEEEEeec--------------CCeEEEEECCCCceEEcCCCCCCCCCC
Q 018005 294 VPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYT--------------WPEILYYNVARRTWHWLPSCPSLPHKW 355 (362)
Q Consensus 294 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--------------~~~v~~yd~~~~~w~~~~~~~~~~~~~ 355 (362)
+|.. +....++..++.||+.++. ...+.+||+++++|+.+ +|......
T Consensus 240 ~p~~------------r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~--~~~~r~~~ 301 (318)
T 2woz_A 240 FPQE------------RSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM--LKEIRYAS 301 (318)
T ss_dssp CSSC------------CBSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE--ESCCGGGT
T ss_pred CCCc------------ccceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh--cccccccc
Confidence 7631 1223445567888887643 24589999999999999 44443333
No 6
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.91 E-value=1e-22 Score=181.50 Aligned_cols=246 Identities=13% Similarity=0.118 Sum_probs=179.6
Q ss_pred ceeeeeeCCCCCeEeecCCcCCCCCCceEEEecCCceEEEecCC-----CCeEEEEeCCcCc---eeeccCCCCCCccce
Q 018005 76 DQYPLYDSTHGTWRRLSLPYSLLLPSAATLLSSSKGLLCFSLPS-----SSSFLVCNLVTLS---SRTIDFPTYPFDFEL 147 (362)
Q Consensus 76 ~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~~s~~Gll~~~~~~-----~~~~~v~NP~t~~---w~~lP~~~~~~~~~~ 147 (362)
..+..||+..++|..++ .+|.++.....+..+|.|++.++. .+.+++|||.+++ |..+++++.++....
T Consensus 31 ~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~ 107 (301)
T 2vpj_A 31 DVVEKYDPKTQEWSFLP---SITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAG 107 (301)
T ss_dssp CCEEEEETTTTEEEECC---CCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCE
T ss_pred eEEEEEcCCCCeEEeCC---CCChhhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCcccee
Confidence 46788999999999986 233344444455567777776652 2479999999999 999999888776665
Q ss_pred EEEEeCCCceEEEEEeeecC---CCeEEEEeCCCCcccccccCCCCccccccCCCcccEEECCEEEEEecC-----CcEE
Q 018005 148 LTLVSTPSGYKIFMLFAKSF---PNYAFVYDSTDQSWSKFDIDGFPSMILSQSSHQEGVFYKGSLYFTTPE-----PFSI 219 (362)
Q Consensus 148 ~~~~~~~~~ykv~~~~~~~~---~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~~~~v~~~G~ly~~~~~-----~~~i 219 (362)
.+.... +++++||... ...+++||+.+++|+..+ .+|. .+..+..+.++|++|++++. ...+
T Consensus 108 ~~~~~~----~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~--~~p~----~r~~~~~~~~~~~iyv~GG~~~~~~~~~~ 177 (301)
T 2vpj_A 108 ATTLGD----MIYVSGGFDGSRRHTSMERYDPNIDQWSMLG--DMQT----AREGAGLVVASGVIYCLGGYDGLNILNSV 177 (301)
T ss_dssp EEEETT----EEEEECCBCSSCBCCEEEEEETTTTEEEEEE--ECSS----CCBSCEEEEETTEEEEECCBCSSCBCCCE
T ss_pred EEEECC----EEEEEcccCCCcccceEEEEcCCCCeEEECC--CCCC----CcccceEEEECCEEEEECCCCCCcccceE
Confidence 554432 7888887543 348999999999999988 6664 33567788889999999863 2468
Q ss_pred EEEEcCCCeeecCCCCCcccccCCCCcccccceeecccCCCeEEEEEEeecCCccceEEEEEECCCCCEEEEecccHHHH
Q 018005 220 VRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMC 299 (362)
Q Consensus 220 ~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~~p~~~~ 299 (362)
.+||+.+++|+.+. + +|..+..+.++. .+|+||++|+.........+.+|++ ..++|+++..+|..
T Consensus 178 ~~~d~~~~~W~~~~-~-------~p~~r~~~~~~~---~~~~i~v~GG~~~~~~~~~v~~yd~-~~~~W~~~~~~p~~-- 243 (301)
T 2vpj_A 178 EKYDPHTGHWTNVT-P-------MATKRSGAGVAL---LNDHIYVVGGFDGTAHLSSVEAYNI-RTDSWTTVTSMTTP-- 243 (301)
T ss_dssp EEEETTTTEEEEEC-C-------CSSCCBSCEEEE---ETTEEEEECCBCSSSBCCCEEEEET-TTTEEEEECCCSSC--
T ss_pred EEEeCCCCcEEeCC-C-------CCcccccceEEE---ECCEEEEEeCCCCCcccceEEEEeC-CCCcEEECCCCCCc--
Confidence 99999999999873 4 666666666664 8999999999754333455555544 23459999887631
Q ss_pred HHhhhccccCCccEEEEeeCCEEEEEeecC-----CeEEEEECCCCceEEcCCCCCCCCCCCcc
Q 018005 300 RKFMSVCYHNYDHVYCFWHQGMICVCCYTW-----PEILYYNVARRTWHWLPSCPSLPHKWSCG 358 (362)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-----~~v~~yd~~~~~w~~~~~~~~~~~~~~~~ 358 (362)
.....++..++.||+.++.. ..+++||+++++|+.++.+|.+....+|.
T Consensus 244 ----------r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~ 297 (301)
T 2vpj_A 244 ----------RCYVGATVLRGRLYAIAGYDGNSLLSSIECYDPIIDSWEVVTSMGTQRCDAGVC 297 (301)
T ss_dssp ----------CBSCEEEEETTEEEEECCBCSSSBEEEEEEEETTTTEEEEEEEEEEEEESCEEE
T ss_pred ----------ccceeEEEECCEEEEEcCcCCCcccccEEEEcCCCCeEEEcCCCCcccccceEE
Confidence 12234455678899887543 35899999999999999888776655554
No 7
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.84 E-value=6.5e-19 Score=157.23 Aligned_cols=204 Identities=15% Similarity=0.217 Sum_probs=151.8
Q ss_pred CCeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCceEEEEEeeec--CCCeEEEEeCCCCcccccccCCCCccccccC
Q 018005 120 SSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKS--FPNYAFVYDSTDQSWSKFDIDGFPSMILSQS 197 (362)
Q Consensus 120 ~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~--~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~ 197 (362)
.+.+.+|||.+++|..+++++.++.....+.... +++++||.. ....+++||+.+++|+..+ .+|. .+
T Consensus 23 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~----~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~--~~p~----~r 92 (306)
T 3ii7_A 23 PQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDN----VVYILGGSQLFPIKRMDCYNVVKDSWYSKL--GPPT----PR 92 (306)
T ss_dssp TTSEEEEETTTTEEEECCCCSCCCBSCEEEEETT----EEEEECCBSSSBCCEEEEEETTTTEEEEEE--CCSS----CC
T ss_pred CceEEEecCCCCCEecCCCCCcccceeEEEEECC----EEEEEeCCCCCCcceEEEEeCCCCeEEECC--CCCc----cc
Confidence 4679999999999999999888776655554433 788888864 2348999999999999988 6765 34
Q ss_pred CCcccEEECCEEEEEecCC------cEEEEEEcCCCeeecCCCCCcccccCCCCcccccceeecccCCCeEEEEEEeecC
Q 018005 198 SHQEGVFYKGSLYFTTPEP------FSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRN 271 (362)
Q Consensus 198 ~~~~~v~~~G~ly~~~~~~------~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~L~vv~~~~~~ 271 (362)
..+..+.++|++|++++.. ..+.+||+.+++|+.+. + +|..+..+.++. .+|+||++++....
T Consensus 93 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~-~-------~p~~r~~~~~~~---~~~~iyv~GG~~~~ 161 (306)
T 3ii7_A 93 DSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKP-S-------MLTQRCSHGMVE---ANGLIYVCGGSLGN 161 (306)
T ss_dssp BSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEEC-C-------CSSCCBSCEEEE---ETTEEEEECCEESC
T ss_pred cceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCC-C-------CcCCcceeEEEE---ECCEEEEECCCCCC
Confidence 5677888999999998732 46899999999999863 4 676666666664 89999999997643
Q ss_pred Cc----cceEEEEEECCCCCEEEEecccHHHHHHhhhccccCCccEEEEeeCCEEEEEeec-----CCeEEEEECCCCce
Q 018005 272 GI----STTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYT-----WPEILYYNVARRTW 342 (362)
Q Consensus 272 ~~----~~~i~vw~l~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-----~~~v~~yd~~~~~w 342 (362)
.. ...+++|++ ..++|+++..+|.. .....++..++.||+.++. ...+.+||+++++|
T Consensus 162 ~~~~~~~~~~~~yd~-~~~~W~~~~~~p~~------------r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W 228 (306)
T 3ii7_A 162 NVSGRVLNSCEVYDP-ATETWTELCPMIEA------------RKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEW 228 (306)
T ss_dssp TTTCEECCCEEEEET-TTTEEEEECCCSSC------------CBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEE
T ss_pred CCcccccceEEEeCC-CCCeEEECCCccch------------hhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcE
Confidence 32 345555544 23459999887631 1223445567888888653 24689999999999
Q ss_pred EEcCCCCCCCCCCCc
Q 018005 343 HWLPSCPSLPHKWSC 357 (362)
Q Consensus 343 ~~~~~~~~~~~~~~~ 357 (362)
+.++.+|.+...+.+
T Consensus 229 ~~~~~~p~~r~~~~~ 243 (306)
T 3ii7_A 229 KMVSPMPWKGVTVKC 243 (306)
T ss_dssp EECCCCSCCBSCCEE
T ss_pred EECCCCCCCccceeE
Confidence 999998887655544
No 8
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.84 E-value=4.2e-19 Score=158.73 Aligned_cols=217 Identities=12% Similarity=0.091 Sum_probs=156.0
Q ss_pred ecCCceEEEecC----CCCeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCceEEEEEeee----c---CCCeEEEEe
Q 018005 107 SSSKGLLCFSLP----SSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAK----S---FPNYAFVYD 175 (362)
Q Consensus 107 ~s~~Gll~~~~~----~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~----~---~~~~~~vy~ 175 (362)
...++.|++.++ ..+.+.+|||.+++|..+++++.++....++.... +|+++||. . ....+++||
T Consensus 21 ~~~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~----~lyv~GG~~~~~~~~~~~~~~~~~d 96 (308)
T 1zgk_A 21 PKVGRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVVGG----LLYAVGGRNNSPDGNTDSSALDCYN 96 (308)
T ss_dssp CCCCCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETT----EEEEECCEEEETTEEEECCCEEEEE
T ss_pred cCCCCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEEECC----EEEEECCCcCCCCCCeecceEEEEC
Confidence 344454444443 23578999999999999998887776555544332 78888876 2 134799999
Q ss_pred CCCCcccccccCCCCccccccCCCcccEEECCEEEEEecC-----CcEEEEEEcCCCeeecCCCCCcccccCCCCccccc
Q 018005 176 STDQSWSKFDIDGFPSMILSQSSHQEGVFYKGSLYFTTPE-----PFSIVRFDLENGIWETPNDANDHMTMMLPHELTFF 250 (362)
Q Consensus 176 s~~~~W~~~~~~~~p~~~~~~~~~~~~v~~~G~ly~~~~~-----~~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~~ 250 (362)
+.+++|+..+ .+|. .+..+..+.++|++|++++. ...+.+||+.+++|+.+. + +|..+..+
T Consensus 97 ~~~~~W~~~~--~~p~----~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~-~-------~p~~r~~~ 162 (308)
T 1zgk_A 97 PMTNQWSPCA--PMSV----PRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVA-P-------MLTRRIGV 162 (308)
T ss_dssp TTTTEEEECC--CCSS----CCBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECC-C-------CSSCCBSC
T ss_pred CCCCeEeECC--CCCc----CccccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECC-C-------CCccccce
Confidence 9999999998 6765 33567788889999999863 246899999999999864 4 66666666
Q ss_pred ceeecccCCCeEEEEEEeecCCccceEEEEEECCCCCEEEEecccHHHHHHhhhccccCCccEEEEeeCCEEEEEeec--
Q 018005 251 RLVNDGEESNKLYLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYT-- 328 (362)
Q Consensus 251 ~lv~~~~~~G~L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-- 328 (362)
.++. .+|+||++|+.........+++|++ ..++|+++..+|.. +....++..++.||+.++.
T Consensus 163 ~~~~---~~~~iyv~GG~~~~~~~~~~~~yd~-~~~~W~~~~~~p~~------------r~~~~~~~~~~~iyv~GG~~~ 226 (308)
T 1zgk_A 163 GVAV---LNRLLYAVGGFDGTNRLNSAECYYP-ERNEWRMITAMNTI------------RSGAGVCVLHNCIYAAGGYDG 226 (308)
T ss_dssp EEEE---ETTEEEEECCBCSSCBCCCEEEEET-TTTEEEECCCCSSC------------CBSCEEEEETTEEEEECCBCS
T ss_pred EEEE---ECCEEEEEeCCCCCCcCceEEEEeC-CCCeEeeCCCCCCc------------cccceEEEECCEEEEEeCCCC
Confidence 6664 8999999999754433455555544 23459999887631 1223444568889988754
Q ss_pred ---CCeEEEEECCCCceEEcCCCCCCCCCCCc
Q 018005 329 ---WPEILYYNVARRTWHWLPSCPSLPHKWSC 357 (362)
Q Consensus 329 ---~~~v~~yd~~~~~w~~~~~~~~~~~~~~~ 357 (362)
...+++||+++++|+.++.+|.+....++
T Consensus 227 ~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~ 258 (308)
T 1zgk_A 227 QDQLNSVERYDVETETWTFVAPMKHRRSALGI 258 (308)
T ss_dssp SSBCCCEEEEETTTTEEEECCCCSSCCBSCEE
T ss_pred CCccceEEEEeCCCCcEEECCCCCCCccceEE
Confidence 24699999999999999988876654443
No 9
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.83 E-value=1.3e-18 Score=155.04 Aligned_cols=201 Identities=9% Similarity=0.099 Sum_probs=148.9
Q ss_pred CeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCceEEEEEeeecC---CCeEEEEeCCCCcccccccCCCCccccccC
Q 018005 121 SSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSF---PNYAFVYDSTDQSWSKFDIDGFPSMILSQS 197 (362)
Q Consensus 121 ~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~---~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~ 197 (362)
+.+.++||.+++|..+++++.++....++.... +|+++||... ...+++||+.+++|+..+ .+|. .+
T Consensus 30 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~----~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~--~~p~----~r 99 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVAELPSRRCRAGMVYMAG----LVFAVGGFNGSLRVRTVDSYDPVKDQWTSVA--NMRD----RR 99 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEETT----EEEEESCBCSSSBCCCEEEEETTTTEEEEEC--CCSS----CC
T ss_pred CcEEEEcCcCCcEeEcccCCcccccceEEEECC----EEEEEeCcCCCccccceEEECCCCCceeeCC--CCCc----cc
Confidence 578999999999999998887766555444322 7888888543 347999999999999998 6765 34
Q ss_pred CCcccEEECCEEEEEecCC-----cEEEEEEcCCCeeecCCCCCcccccCCCCcccccceeecccCCCeEEEEEEeecCC
Q 018005 198 SHQEGVFYKGSLYFTTPEP-----FSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNG 272 (362)
Q Consensus 198 ~~~~~v~~~G~ly~~~~~~-----~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~L~vv~~~~~~~ 272 (362)
..+..+.++|++|++++.. ..+.+||+.+++|+.+. + +|..+..+.+++ .+|+||++|+.....
T Consensus 100 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~-~-------~p~~r~~~~~~~---~~~~iyv~GG~~~~~ 168 (302)
T 2xn4_A 100 STLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVA-P-------MNTRRSSVGVGV---VGGLLYAVGGYDVAS 168 (302)
T ss_dssp BSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEEC-C-------CSSCCBSCEEEE---ETTEEEEECCEETTT
T ss_pred cceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecC-C-------CCCcccCceEEE---ECCEEEEEeCCCCCC
Confidence 5677888999999998732 46899999999999863 4 666666666664 899999999976432
Q ss_pred c--cceEEEEEECCCC-CEEEEecccHHHHHHhhhccccCCccEEEEeeCCEEEEEeec-----CCeEEEEECCCCceEE
Q 018005 273 I--STTMKLWELGCGG-NWIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYT-----WPEILYYNVARRTWHW 344 (362)
Q Consensus 273 ~--~~~i~vw~l~~~~-~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-----~~~v~~yd~~~~~w~~ 344 (362)
. ...+++| |... +|+++..+|.. .....++..++.||+.++. ...+..||+++++|+.
T Consensus 169 ~~~~~~~~~y--d~~~~~W~~~~~~p~~------------r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 234 (302)
T 2xn4_A 169 RQCLSTVECY--NATTNEWTYIAEMSTR------------RSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQ 234 (302)
T ss_dssp TEECCCEEEE--ETTTTEEEEECCCSSC------------CBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEE
T ss_pred CccccEEEEE--eCCCCcEEECCCCccc------------cccccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEee
Confidence 1 3445555 5444 49999887621 1223445567889988754 2469999999999999
Q ss_pred cCCCCCCCCCCC
Q 018005 345 LPSCPSLPHKWS 356 (362)
Q Consensus 345 ~~~~~~~~~~~~ 356 (362)
++.+|.+.....
T Consensus 235 ~~~~~~~r~~~~ 246 (302)
T 2xn4_A 235 VADMNMCRRNAG 246 (302)
T ss_dssp ECCCSSCCBSCE
T ss_pred CCCCCCccccCe
Confidence 998887654433
No 10
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.83 E-value=1.5e-18 Score=154.39 Aligned_cols=215 Identities=13% Similarity=0.108 Sum_probs=155.2
Q ss_pred CCceEEEecC-C-----CCeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCceEEEEEeeecC---CCeEEEEeCCCC
Q 018005 109 SKGLLCFSLP-S-----SSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSF---PNYAFVYDSTDQ 179 (362)
Q Consensus 109 ~~Gll~~~~~-~-----~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~---~~~~~vy~s~~~ 179 (362)
.+|.+++.++ . ...+.+|||.+++|..+++++.++.....+.... +++++||... ...+++||+.++
T Consensus 13 ~~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~----~l~v~GG~~~~~~~~~~~~~d~~~~ 88 (301)
T 2vpj_A 13 ANEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHD----RIYVIGGYDGRSRLSSVECLDYTAD 88 (301)
T ss_dssp CCEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETT----EEEEECCBCSSCBCCCEEEEETTCC
T ss_pred CCCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEEECC----EEEEEcCCCCCccCceEEEEECCCC
Confidence 4555555444 1 2478999999999999998877665554443332 7888887542 348999999999
Q ss_pred c---ccccccCCCCccccccCCCcccEEECCEEEEEecC-----CcEEEEEEcCCCeeecCCCCCcccccCCCCcccccc
Q 018005 180 S---WSKFDIDGFPSMILSQSSHQEGVFYKGSLYFTTPE-----PFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFR 251 (362)
Q Consensus 180 ~---W~~~~~~~~p~~~~~~~~~~~~v~~~G~ly~~~~~-----~~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~~~ 251 (362)
+ |+..+ .+|. .+..+..+.++|++|++++. ...+.+||+.+++|+.+. + +|..+..+.
T Consensus 89 ~~~~W~~~~--~~p~----~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~-~-------~p~~r~~~~ 154 (301)
T 2vpj_A 89 EDGVWYSVA--PMNV----RRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLG-D-------MQTAREGAG 154 (301)
T ss_dssp TTCCCEEEC--CCSS----CCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEE-E-------CSSCCBSCE
T ss_pred CCCeeEECC--CCCC----CccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECC-C-------CCCCcccce
Confidence 9 99998 6765 34567788889999999863 246899999999999863 4 666666666
Q ss_pred eeecccCCCeEEEEEEeecCCccceEEEEEECCCCCEEEEecccHHHHHHhhhccccCCccEEEEeeCCEEEEEeec---
Q 018005 252 LVNDGEESNKLYLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYT--- 328 (362)
Q Consensus 252 lv~~~~~~G~L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--- 328 (362)
+++ .+|+||++|+.........+++|++ ..++|+++..+|.. .....++..++.||+.++.
T Consensus 155 ~~~---~~~~iyv~GG~~~~~~~~~~~~~d~-~~~~W~~~~~~p~~------------r~~~~~~~~~~~i~v~GG~~~~ 218 (301)
T 2vpj_A 155 LVV---ASGVIYCLGGYDGLNILNSVEKYDP-HTGHWTNVTPMATK------------RSGAGVALLNDHIYVVGGFDGT 218 (301)
T ss_dssp EEE---ETTEEEEECCBCSSCBCCCEEEEET-TTTEEEEECCCSSC------------CBSCEEEEETTEEEEECCBCSS
T ss_pred EEE---ECCEEEEECCCCCCcccceEEEEeC-CCCcEEeCCCCCcc------------cccceEEEECCEEEEEeCCCCC
Confidence 664 8999999999654333455555544 23459999877631 1223445567889988754
Q ss_pred --CCeEEEEECCCCceEEcCCCCCCCCCCCc
Q 018005 329 --WPEILYYNVARRTWHWLPSCPSLPHKWSC 357 (362)
Q Consensus 329 --~~~v~~yd~~~~~w~~~~~~~~~~~~~~~ 357 (362)
...+.+||+++++|+.++.+|.+...+++
T Consensus 219 ~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~ 249 (301)
T 2vpj_A 219 AHLSSVEAYNIRTDSWTTVTSMTTPRCYVGA 249 (301)
T ss_dssp SBCCCEEEEETTTTEEEEECCCSSCCBSCEE
T ss_pred cccceEEEEeCCCCcEEECCCCCCcccceeE
Confidence 34699999999999999988876654443
No 11
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.83 E-value=5.4e-19 Score=161.27 Aligned_cols=231 Identities=12% Similarity=0.096 Sum_probs=156.1
Q ss_pred CCCCCceEEEecCCceEEEecC-CCCeEEEEeCC--cCceeeccCCC-CCCccceEEEEeCCCceEEEEEeee-c-----
Q 018005 97 LLLPSAATLLSSSKGLLCFSLP-SSSSFLVCNLV--TLSSRTIDFPT-YPFDFELLTLVSTPSGYKIFMLFAK-S----- 166 (362)
Q Consensus 97 ~~~~~~~~~~~s~~Gll~~~~~-~~~~~~v~NP~--t~~w~~lP~~~-~~~~~~~~~~~~~~~~ykv~~~~~~-~----- 166 (362)
+|.++.....+..+|.|++.++ ..+.++++|+. +++|..+++++ .++...+.+.... +|+++||. .
T Consensus 6 lP~~r~~~~~~~~~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~----~lyv~GG~~~~~~~~ 81 (357)
T 2uvk_A 6 TPVPFKSGTGAIDNDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDG----NLYVFGGIGKNSEGL 81 (357)
T ss_dssp CSSCCCSCEEEEETTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETT----EEEEECCEEECTTSC
T ss_pred CCccccceEEEEECCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEECC----EEEEEcCCCCCCCcc
Confidence 3444444444555887777765 34589999998 49999999988 6666555554432 78888886 2
Q ss_pred --CCCeEEEEeCCCCcccccccCCCCccccccCCCcccEEECCEEEEEecCC----------------------------
Q 018005 167 --FPNYAFVYDSTDQSWSKFDIDGFPSMILSQSSHQEGVFYKGSLYFTTPEP---------------------------- 216 (362)
Q Consensus 167 --~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~~~~v~~~G~ly~~~~~~---------------------------- 216 (362)
....+++||+.+++|+..+ .+++ . .+..+.++.++|++|++++..
T Consensus 82 ~~~~~~v~~yd~~~~~W~~~~--~~~p--~-~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (357)
T 2uvk_A 82 TQVFNDVHKYNPKTNSWVKLM--SHAP--M-GMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHY 156 (357)
T ss_dssp EEECCCEEEEETTTTEEEECS--CCCS--S-CCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred ceeeccEEEEeCCCCcEEECC--CCCC--c-ccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhh
Confidence 1348999999999999998 6652 1 235566778999999998742
Q ss_pred -----------cEEEEEEcCCCeeecCCCCCcccccCCCCcccc-cceeecccCCCeEEEEEEeecCC-ccceEEEEEEC
Q 018005 217 -----------FSIVRFDLENGIWETPNDANDHMTMMLPHELTF-FRLVNDGEESNKLYLIGGVGRNG-ISTTMKLWELG 283 (362)
Q Consensus 217 -----------~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~-~~lv~~~~~~G~L~vv~~~~~~~-~~~~i~vw~l~ 283 (362)
..+.+||+.+++|+.+. + +|..... +.+++ .+|+||++||..... ....+.+|.++
T Consensus 157 ~~~~~~~~~~~~~v~~yd~~~~~W~~~~-~-------~p~~~~~~~~~~~---~~~~iyv~GG~~~~~~~~~~v~~~d~d 225 (357)
T 2uvk_A 157 FDKKAEDYFFNKFLLSFDPSTQQWSYAG-E-------SPWYGTAGAAVVN---KGDKTWLINGEAKPGLRTDAVFELDFT 225 (357)
T ss_dssp HSSCGGGGCCCCEEEEEETTTTEEEEEE-E-------CSSCCCBSCEEEE---ETTEEEEECCEEETTEECCCEEEEECC
T ss_pred ccccccccCCcccEEEEeCCCCcEEECC-C-------CCCCCcccccEEE---ECCEEEEEeeecCCCcccCceEEEEec
Confidence 47999999999999863 4 5544333 56663 899999999865432 13345555554
Q ss_pred CCC-CEEEEecccHHHHHHhhhccccCCccEEEEeeCCEEEEEeecC----------------------CeEEEEECCCC
Q 018005 284 CGG-NWIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYTW----------------------PEILYYNVARR 340 (362)
Q Consensus 284 ~~~-~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~----------------------~~v~~yd~~~~ 340 (362)
... .|+++..+|... ......++..++.||+.++.. ..+.+||++++
T Consensus 226 ~~~~~W~~~~~~~~~~----------~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~ 295 (357)
T 2uvk_A 226 GNNLKWNKLAPVSSPD----------GVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNG 295 (357)
T ss_dssp ---CEEEECCCSSTTT----------CCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC--
T ss_pred CCCCcEEecCCCCCCc----------ccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCC
Confidence 344 499998875211 112233556778899887531 24799999999
Q ss_pred ceEEcCCCCCCCCCCCc
Q 018005 341 TWHWLPSCPSLPHKWSC 357 (362)
Q Consensus 341 ~w~~~~~~~~~~~~~~~ 357 (362)
+|+.++.+|.+....+|
T Consensus 296 ~W~~~~~~p~~r~~~~~ 312 (357)
T 2uvk_A 296 KWDKSGELSQGRAYGVS 312 (357)
T ss_dssp -CEEEEECSSCCBSSEE
T ss_pred ceeeCCCCCCCccccee
Confidence 99999988887665544
No 12
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.82 E-value=5.5e-18 Score=154.58 Aligned_cols=240 Identities=13% Similarity=0.079 Sum_probs=157.7
Q ss_pred ceeeeeeCC--CCCeEeecCCcCCC-CCCceEEEecCCceEEEecCC----------CCeEEEEeCCcCceeeccCCC-C
Q 018005 76 DQYPLYDST--HGTWRRLSLPYSLL-LPSAATLLSSSKGLLCFSLPS----------SSSFLVCNLVTLSSRTIDFPT-Y 141 (362)
Q Consensus 76 ~~~~~~d~~--~~~w~~~~~~~~~~-~~~~~~~~~s~~Gll~~~~~~----------~~~~~v~NP~t~~w~~lP~~~-~ 141 (362)
..+..||+. .++|..++ ++| .++....++..+|.|++.++. .+.+.+|||.|++|..+++++ .
T Consensus 31 ~~~~~~d~~~~~~~W~~~~---~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~ 107 (357)
T 2uvk_A 31 TAWYKLDTQAKDKKWTALA---AFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPM 107 (357)
T ss_dssp TCEEEEETTSSSCCEEECC---CCTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSS
T ss_pred CeEEEEccccCCCCeeECC---CCCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCc
Confidence 467889997 48999886 334 345445556668877777654 147899999999999999887 4
Q ss_pred CCccceEEEEeCCCceEEEEEeeecC-------------------------------------CCeEEEEeCCCCccccc
Q 018005 142 PFDFELLTLVSTPSGYKIFMLFAKSF-------------------------------------PNYAFVYDSTDQSWSKF 184 (362)
Q Consensus 142 ~~~~~~~~~~~~~~~ykv~~~~~~~~-------------------------------------~~~~~vy~s~~~~W~~~ 184 (362)
++.....+.... +|+++||... ...+++||+.+++|+..
T Consensus 108 ~r~~~~~~~~~~----~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 183 (357)
T 2uvk_A 108 GMAGHVTFVHNG----KAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYA 183 (357)
T ss_dssp CCSSEEEEEETT----EEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEE
T ss_pred ccccceEEEECC----EEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEEC
Confidence 444433333222 7888887531 35899999999999998
Q ss_pred ccCCCCccccccCCCcccEEECCEEEEEecC------CcEEEEEEc--CCCeeecCCCCCcccccCCCCcccccceeecc
Q 018005 185 DIDGFPSMILSQSSHQEGVFYKGSLYFTTPE------PFSIVRFDL--ENGIWETPNDANDHMTMMLPHELTFFRLVNDG 256 (362)
Q Consensus 185 ~~~~~p~~~~~~~~~~~~v~~~G~ly~~~~~------~~~i~~~D~--~~~~w~~~~~p~~~~~~~~p~~~~~~~lv~~~ 256 (362)
. .+|. +.+..+..+.++|++|++++. ...+.+||+ .+++|+.+. +. ..|..+..+.+++
T Consensus 184 ~--~~p~---~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~-~~-----~~~~~~~~~~~~~-- 250 (357)
T 2uvk_A 184 G--ESPW---YGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLA-PV-----SSPDGVAGGFAGI-- 250 (357)
T ss_dssp E--ECSS---CCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECC-CS-----STTTCCBSCEEEE--
T ss_pred C--CCCC---CCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecC-CC-----CCCcccccceEEE--
Confidence 8 6664 122346788889999999863 235788986 899999864 30 0344444455553
Q ss_pred cCCCeEEEEEEeecCC---------------c--cceEEEEEECCCCCEEEEecccHHHHHHhhhccccCCccEEEEeeC
Q 018005 257 EESNKLYLIGGVGRNG---------------I--STTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQ 319 (362)
Q Consensus 257 ~~~G~L~vv~~~~~~~---------------~--~~~i~vw~l~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 319 (362)
.+|+||++||..... . ...+++|.++ .++|+++..+|.. +....++..+
T Consensus 251 -~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~-~~~W~~~~~~p~~------------r~~~~~~~~~ 316 (357)
T 2uvk_A 251 -SNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWH-NGKWDKSGELSQG------------RAYGVSLPWN 316 (357)
T ss_dssp -ETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC----CEEEEECSSC------------CBSSEEEEET
T ss_pred -ECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecC-CCceeeCCCCCCC------------cccceeEEeC
Confidence 899999999965321 0 1245555442 3459999888631 1223445567
Q ss_pred CEEEEEeecC------CeEEEEECCCCceEEcCCCC
Q 018005 320 GMICVCCYTW------PEILYYNVARRTWHWLPSCP 349 (362)
Q Consensus 320 ~~i~~~~~~~------~~v~~yd~~~~~w~~~~~~~ 349 (362)
+.||+.++.. ..++.+++++++|......|
T Consensus 317 ~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~~~~ 352 (357)
T 2uvk_A 317 NSLLIIGGETAGGKAVTDSVLITVKDNKVTVQNLEH 352 (357)
T ss_dssp TEEEEEEEECGGGCEEEEEEEEEC-CCSCEEEC---
T ss_pred CEEEEEeeeCCCCCEeeeEEEEEEcCcEeEeeeccc
Confidence 8888887532 24889999999999986554
No 13
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.80 E-value=7e-18 Score=151.22 Aligned_cols=210 Identities=16% Similarity=0.190 Sum_probs=146.1
Q ss_pred eEEEecCCCCeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCceEEEEEeeec----C--C---CeEEEEeCCCCccc
Q 018005 112 LLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKS----F--P---NYAFVYDSTDQSWS 182 (362)
Q Consensus 112 ll~~~~~~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~----~--~---~~~~vy~s~~~~W~ 182 (362)
.+++.++ ..+.+|||.|++|.. ++++.+..+...+.+.. .-+|+++||.. . . ..+++||+.+++|+
T Consensus 6 ~l~~~GG--~~~~~yd~~~~~W~~-~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~ 80 (315)
T 4asc_A 6 LIFMISE--EGAVAYDPAANECYC-ASLSSQVPKNHVSLVTK--ENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWL 80 (315)
T ss_dssp EEEEEET--TEEEEEETTTTEEEE-EECCCCSCSSEEEEECT--TCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEE
T ss_pred EEEEEcC--CceEEECCCCCeEec-CCCCCCCCccceEEEEE--CCEEEEEcCcccCCCCCccccccceEEecCCCCeEE
Confidence 3444443 679999999999987 55543333333333322 22677777741 1 1 14899999999999
Q ss_pred ccccCCCCccccccCCCcccEEECCEEEEEecC--------CcEEEEEEcCCCeeecCCCCCcccccCCCCcccccceee
Q 018005 183 KFDIDGFPSMILSQSSHQEGVFYKGSLYFTTPE--------PFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVN 254 (362)
Q Consensus 183 ~~~~~~~p~~~~~~~~~~~~v~~~G~ly~~~~~--------~~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~~~lv~ 254 (362)
..+ .+|. .+..+..+.++|++|++++. ...+.+||+.+++|+.+. + +|..+..+.+++
T Consensus 81 ~~~--~~p~----~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~-~-------~p~~r~~~~~~~ 146 (315)
T 4asc_A 81 GMP--PLPS----PRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESD-P-------LPYVVYGHTVLS 146 (315)
T ss_dssp ECC--CBSS----CEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECC-C-------CSSCCBSCEEEE
T ss_pred ECC--CCCc----chhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECC-C-------CCCcccceeEEE
Confidence 988 6765 33567788899999999872 146899999999999864 4 677666677764
Q ss_pred cccCCCeEEEEEEeec-CCccceEEEEEECCCC-CEEEEecccHHHHHHhhhccccCCccEEEEeeCCEEEEEeecC---
Q 018005 255 DGEESNKLYLIGGVGR-NGISTTMKLWELGCGG-NWIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYTW--- 329 (362)
Q Consensus 255 ~~~~~G~L~vv~~~~~-~~~~~~i~vw~l~~~~-~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--- 329 (362)
.+|+||++||... ......+++| |... +|+++..+|. .+....++..++.||+.++..
T Consensus 147 ---~~~~iyv~GG~~~~~~~~~~~~~y--d~~~~~W~~~~~~p~------------~r~~~~~~~~~~~iyv~GG~~~~~ 209 (315)
T 4asc_A 147 ---HMDLVYVIGGKGSDRKCLNKMCVY--DPKKFEWKELAPMQT------------ARSLFGATVHDGRIIVAAGVTDTG 209 (315)
T ss_dssp ---ETTEEEEECCBCTTSCBCCCEEEE--ETTTTEEEECCCCSS------------CCBSCEEEEETTEEEEEEEECSSS
T ss_pred ---ECCEEEEEeCCCCCCcccceEEEE--eCCCCeEEECCCCCC------------chhceEEEEECCEEEEEeccCCCC
Confidence 8999999999632 2223445555 5444 4999988763 112234455678888887542
Q ss_pred --CeEEEEECCCCceEEcCCCCCCCCCCCc
Q 018005 330 --PEILYYNVARRTWHWLPSCPSLPHKWSC 357 (362)
Q Consensus 330 --~~v~~yd~~~~~w~~~~~~~~~~~~~~~ 357 (362)
..+.+||+++++|+.++.+|.+...+++
T Consensus 210 ~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~ 239 (315)
T 4asc_A 210 LTSSAEVYSITDNKWAPFEAFPQERSSLSL 239 (315)
T ss_dssp EEEEEEEEETTTTEEEEECCCSSCCBSCEE
T ss_pred ccceEEEEECCCCeEEECCCCCCcccceeE
Confidence 2589999999999999988877655443
No 14
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.78 E-value=4.9e-17 Score=145.90 Aligned_cols=210 Identities=12% Similarity=0.229 Sum_probs=144.9
Q ss_pred ceEEEecCCCCeEEEEeCCcCceeeccCC-CCCCccceEEEEeCCCceEEEEEeeec----C-----CCeEEEEeCCCCc
Q 018005 111 GLLCFSLPSSSSFLVCNLVTLSSRTIDFP-TYPFDFELLTLVSTPSGYKIFMLFAKS----F-----PNYAFVYDSTDQS 180 (362)
Q Consensus 111 Gll~~~~~~~~~~~v~NP~t~~w~~lP~~-~~~~~~~~~~~~~~~~~ykv~~~~~~~----~-----~~~~~vy~s~~~~ 180 (362)
+.|++.++ ..+.+|||.+++|...+.+ +.++.. .+++.. .-+|+++||.. . ...+++||+.+++
T Consensus 16 ~~i~~~GG--~~~~~yd~~~~~W~~~~~~~~~~r~~--~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~ 89 (318)
T 2woz_A 16 DLILLVND--TAAVAYDPMENECYLTALAEQIPRNH--SSIVTQ--QNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSE 89 (318)
T ss_dssp EEEEEECS--SEEEEEETTTTEEEEEEECTTSCSSE--EEEECS--SSCEEEEESSCC-------CCCBEEEEEETTTTE
T ss_pred chhhhccc--cceEEECCCCCceecccCCccCCccc--eEEEEE--CCEEEEECCcccCccccCCCccccEEEEeCCCCc
Confidence 45555554 3589999999999985432 123333 333321 23688888731 1 1248999999999
Q ss_pred ccccccCCCCccccccCCCcccEEECCEEEEEecCC-------cEEEEEEcCCCeeecCCCCCcccccCCCCccccccee
Q 018005 181 WSKFDIDGFPSMILSQSSHQEGVFYKGSLYFTTPEP-------FSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLV 253 (362)
Q Consensus 181 W~~~~~~~~p~~~~~~~~~~~~v~~~G~ly~~~~~~-------~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~~~lv 253 (362)
|+..+ .+|. .+..+..+.++|++|++++.. ..+.+||+.+++|+.+. + +|..+..+.++
T Consensus 90 W~~~~--~~p~----~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~-~-------~p~~r~~~~~~ 155 (318)
T 2woz_A 90 WVGLP--PLPS----ARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVK-N-------LPIKVYGHNVI 155 (318)
T ss_dssp EEECS--CBSS----CBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEEC-C-------CSSCEESCEEE
T ss_pred EEECC--CCCc----cccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECC-C-------CCCcccccEEE
Confidence 99988 6765 335677888999999998732 46899999999999864 4 67666666776
Q ss_pred ecccCCCeEEEEEEeecC-CccceEEEEEECCCC-CEEEEecccHHHHHHhhhccccCCccEEEEeeCCEEEEEeecC--
Q 018005 254 NDGEESNKLYLIGGVGRN-GISTTMKLWELGCGG-NWIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYTW-- 329 (362)
Q Consensus 254 ~~~~~~G~L~vv~~~~~~-~~~~~i~vw~l~~~~-~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-- 329 (362)
+ .+|+||++||.... .....+++| |... +|+++..+|. .+....++..++.||+.++..
T Consensus 156 ~---~~~~iyv~GG~~~~~~~~~~~~~y--d~~~~~W~~~~~~p~------------~r~~~~~~~~~~~iyv~GG~~~~ 218 (318)
T 2woz_A 156 S---HNGMIYCLGGKTDDKKCTNRVFIY--NPKKGDWKDLAPMKT------------PRSMFGVAIHKGKIVIAGGVTED 218 (318)
T ss_dssp E---ETTEEEEECCEESSSCBCCCEEEE--ETTTTEEEEECCCSS------------CCBSCEEEEETTEEEEEEEEETT
T ss_pred E---ECCEEEEEcCCCCCCCccceEEEE--cCCCCEEEECCCCCC------------CcccceEEEECCEEEEEcCcCCC
Confidence 4 89999999997532 123445555 5444 4999988762 112234455678888887532
Q ss_pred ---CeEEEEECCCCceEEcCCCCCCCCCCCc
Q 018005 330 ---PEILYYNVARRTWHWLPSCPSLPHKWSC 357 (362)
Q Consensus 330 ---~~v~~yd~~~~~w~~~~~~~~~~~~~~~ 357 (362)
..+.+||+++++|+.++.+|.+...+++
T Consensus 219 ~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~ 249 (318)
T 2woz_A 219 GLSASVEAFDLKTNKWEVMTEFPQERSSISL 249 (318)
T ss_dssp EEEEEEEEEETTTCCEEECCCCSSCCBSCEE
T ss_pred CccceEEEEECCCCeEEECCCCCCcccceEE
Confidence 3589999999999999998876554443
No 15
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.71 E-value=4.8e-16 Score=153.04 Aligned_cols=246 Identities=11% Similarity=0.045 Sum_probs=158.0
Q ss_pred eeeeeCCCCCeEeec-CCcCCCCCCceEEEecCCceEEEecCCC-----------CeEEEEeCCcCceeeccCCCCCCcc
Q 018005 78 YPLYDSTHGTWRRLS-LPYSLLLPSAATLLSSSKGLLCFSLPSS-----------SSFLVCNLVTLSSRTIDFPTYPFDF 145 (362)
Q Consensus 78 ~~~~d~~~~~w~~~~-~~~~~~~~~~~~~~~s~~Gll~~~~~~~-----------~~~~v~NP~t~~w~~lP~~~~~~~~ 145 (362)
+..|||..++|..+. +| .......+...+|.|++.++.. ..+.+|||.|++|..++.++.++..
T Consensus 168 ~~~~dp~~~~W~~~~~~P----~~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~ 243 (656)
T 1k3i_A 168 YTAPQPGLGRWGPTIDLP----IVPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDM 243 (656)
T ss_dssp CCCCCTTSCEEEEEEECS----SCCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCC
T ss_pred cccCCCCCCeeeeeccCC----CCceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCC
Confidence 456899999999874 44 2222222333377666654311 2688999999999999887666544
Q ss_pred ce--EEEEeCCCceEEEEEeeecCCCeEEEEeCCCCcccccccCCCCccccccCCCcccEEE-CCEEEEEecC-C-----
Q 018005 146 EL--LTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILSQSSHQEGVFY-KGSLYFTTPE-P----- 216 (362)
Q Consensus 146 ~~--~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~~~~v~~-~G~ly~~~~~-~----- 216 (362)
.+ .++.. +-+|+++||... ..+++||+.+++|+..+ .||. .+..+..+.+ +|++|++++. .
T Consensus 244 ~~~~~~~~~---~g~lyv~GG~~~-~~v~~yd~~t~~W~~~~--~~~~----~R~~~s~~~~~dg~iyv~GG~~~~~~~~ 313 (656)
T 1k3i_A 244 FCPGISMDG---NGQIVVTGGNDA-KKTSLYDSSSDSWIPGP--DMQV----ARGYQSSATMSDGRVFTIGGSWSGGVFE 313 (656)
T ss_dssp SSCEEEECT---TSCEEEECSSST-TCEEEEEGGGTEEEECC--CCSS----CCSSCEEEECTTSCEEEECCCCCSSSCC
T ss_pred ccccccCCC---CCCEEEeCCCCC-CceEEecCcCCceeECC--CCCc----cccccceEEecCCeEEEEeCcccCCccc
Confidence 33 23222 227888888543 38999999999999988 6765 3345667777 9999999883 1
Q ss_pred cEEEEEEcCCCeeecCC----CCCcccccCCCCc----------------------------------------------
Q 018005 217 FSIVRFDLENGIWETPN----DANDHMTMMLPHE---------------------------------------------- 246 (362)
Q Consensus 217 ~~i~~~D~~~~~w~~~~----~p~~~~~~~~p~~---------------------------------------------- 246 (362)
..+.+||+.+++|+.+. .| ++..
T Consensus 314 ~~~e~yd~~t~~W~~~~~~~~~p-------~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~ 386 (656)
T 1k3i_A 314 KNGEVYSPSSKTWTSLPNAKVNP-------MLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAG 386 (656)
T ss_dssp CCEEEEETTTTEEEEETTSCSGG-------GCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEE
T ss_pred ccceEeCCCCCcceeCCCccccc-------cccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCC
Confidence 46899999999999752 12 1110
Q ss_pred ------------cccccee-ecccCCCeEEEEEEeecCC---ccc-eEEEEEECCCC-CEEEEe--cccHHHHHHhhhcc
Q 018005 247 ------------LTFFRLV-NDGEESNKLYLIGGVGRNG---IST-TMKLWELGCGG-NWIEVE--RVPEMMCRKFMSVC 306 (362)
Q Consensus 247 ------------~~~~~lv-~~~~~~G~L~vv~~~~~~~---~~~-~i~vw~l~~~~-~W~~v~--~~p~~~~~~~~~~~ 306 (362)
.....++ .. .+|+||++||..... ... ...++.+|... .|.++. .||.
T Consensus 387 ~~~~~~~~~~~~~~~~av~~~~--~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~---------- 454 (656)
T 1k3i_A 387 KRQSNRGVAPDAMCGNAVMYDA--VKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYF---------- 454 (656)
T ss_dssp ECEETTEECCCCBTCEEEEEET--TTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSS----------
T ss_pred ccccccccCCCCCCCceEeccC--CCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCC----------
Confidence 0011111 01 589999999853211 112 11334445554 499986 6652
Q ss_pred ccCCccEEEEee-CCEEEEEeecC-----------CeEEEEECCCCceEEcCCCCCCCCCCCcc
Q 018005 307 YHNYDHVYCFWH-QGMICVCCYTW-----------PEILYYNVARRTWHWLPSCPSLPHKWSCG 358 (362)
Q Consensus 307 ~~~~~~~~~~~~-~~~i~~~~~~~-----------~~v~~yd~~~~~w~~~~~~~~~~~~~~~~ 358 (362)
.+....++.. ++.||+.++.. ..+++||+++++|+.++.+|.+..-+++.
T Consensus 455 --~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a 516 (656)
T 1k3i_A 455 --ARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSIS 516 (656)
T ss_dssp --CCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSCCCTTEEE
T ss_pred --CcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCCCCccccccHh
Confidence 1111233333 67788876532 45899999999999999998887777654
No 16
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.68 E-value=5.9e-15 Score=145.77 Aligned_cols=213 Identities=8% Similarity=0.084 Sum_probs=145.2
Q ss_pred ecCCceEEEecCC----CCeEEEEeCCcCceeecc-C-----CCCCCccceEEEEeCCCceEEEEEeeecC----CCeEE
Q 018005 107 SSSKGLLCFSLPS----SSSFLVCNLVTLSSRTID-F-----PTYPFDFELLTLVSTPSGYKIFMLFAKSF----PNYAF 172 (362)
Q Consensus 107 ~s~~Gll~~~~~~----~~~~~v~NP~t~~w~~lP-~-----~~~~~~~~~~~~~~~~~~ykv~~~~~~~~----~~~~~ 172 (362)
++.++.|++.++. .+.+.+|||.+++|..++ + ++.++..+..+.... .-+++++||... ...++
T Consensus 394 ~~~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~--~~~lyv~GG~~~~~~~~~dv~ 471 (695)
T 2zwa_A 394 DVAGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISR--NNQLLLIGGRKAPHQGLSDNW 471 (695)
T ss_dssp EECSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETT--TTEEEEECCBSSTTCBCCCCE
T ss_pred EEECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEcc--CCEEEEEcCCCCCCCccccEE
Confidence 3367777777652 357899999999999998 5 344555555444410 127899988643 24799
Q ss_pred EEeCCCCcccccccCCCCccccccCCCcccEEE-CCEEEEEecCC--cEEEEEEcCCCeeecCCCCCcccccCCCCcccc
Q 018005 173 VYDSTDQSWSKFDIDGFPSMILSQSSHQEGVFY-KGSLYFTTPEP--FSIVRFDLENGIWETPNDANDHMTMMLPHELTF 249 (362)
Q Consensus 173 vy~s~~~~W~~~~~~~~p~~~~~~~~~~~~v~~-~G~ly~~~~~~--~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~ 249 (362)
+||+.+++|+..+ .+|. .+..+.++.+ +|++|++++.. ..+.+||+.+++|+.+...++ +|..+..
T Consensus 472 ~yd~~t~~W~~~~--~~p~----~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~-----~p~~r~~ 540 (695)
T 2zwa_A 472 IFDMKTREWSMIK--SLSH----TRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDE-----FFQNSLV 540 (695)
T ss_dssp EEETTTTEEEECC--CCSB----CCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSG-----GGGSCCB
T ss_pred EEeCCCCcEEECC--CCCC----CcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCC-----CCCcccc
Confidence 9999999999998 7775 3456667775 99999998742 169999999999998753211 4444444
Q ss_pred cceeecccCC---CeEEEEEEeecC--CccceEEEEEECCCCC-----EEEEecccHHHHHHhhhccccCCccEEEEeeC
Q 018005 250 FRLVNDGEES---NKLYLIGGVGRN--GISTTMKLWELGCGGN-----WIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQ 319 (362)
Q Consensus 250 ~~lv~~~~~~---G~L~vv~~~~~~--~~~~~i~vw~l~~~~~-----W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 319 (362)
+..++ ++ |+||++||...+ .....+.+|+++.... |+++..+|. . .+....++..+
T Consensus 541 ~~a~v---~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~------~-----~R~~~~~~~~~ 606 (695)
T 2zwa_A 541 SAGLE---FDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPL------F-----QRYGSQIKYIT 606 (695)
T ss_dssp SCEEE---EETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGG------G-----CCBSCEEEEEE
T ss_pred eeEEE---EeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCC------C-----CcccceEEEeC
Confidence 44332 34 999999996432 2346778888754442 999987641 1 11222334444
Q ss_pred -CEEEEEeec--------CCeEEEEECCCCceEEcC
Q 018005 320 -GMICVCCYT--------WPEILYYNVARRTWHWLP 346 (362)
Q Consensus 320 -~~i~~~~~~--------~~~v~~yd~~~~~w~~~~ 346 (362)
+.||+.++. ...+++||+++++|+.++
T Consensus 607 ~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~ 642 (695)
T 2zwa_A 607 PRKLLIVGGTSPSGLFDRTNSIISLDPLSETLTSIP 642 (695)
T ss_dssp TTEEEEECCBCSSCCCCTTTSEEEEETTTTEEEECC
T ss_pred CCEEEEECCccCCCCCCCCCeEEEEECCCCeEEEee
Confidence 788888753 346999999999999653
No 17
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.60 E-value=6.4e-14 Score=138.38 Aligned_cols=201 Identities=8% Similarity=0.009 Sum_probs=137.8
Q ss_pred ceeeeeeCCCCCeEeecCC---cCCCCCCceEEEecC--CceEEEecCC------CCeEEEEeCCcCceeeccCCCCCCc
Q 018005 76 DQYPLYDSTHGTWRRLSLP---YSLLLPSAATLLSSS--KGLLCFSLPS------SSSFLVCNLVTLSSRTIDFPTYPFD 144 (362)
Q Consensus 76 ~~~~~~d~~~~~w~~~~~~---~~~~~~~~~~~~~s~--~Gll~~~~~~------~~~~~v~NP~t~~w~~lP~~~~~~~ 144 (362)
..++.||+..++|..++++ ..+|.++....++.. +|-+++.++. .+.+.+|||.|++|..+++++.++.
T Consensus 412 ~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~ 491 (695)
T 2zwa_A 412 NEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRF 491 (695)
T ss_dssp CCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCB
T ss_pred CcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcc
Confidence 4578899999999998733 124455555555555 8877777652 2478999999999999999888777
Q ss_pred cceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCcccccccCC---CCccccccCCCcccEEEC---CEEEEEecC---
Q 018005 145 FELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDG---FPSMILSQSSHQEGVFYK---GSLYFTTPE--- 215 (362)
Q Consensus 145 ~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~~~~---~p~~~~~~~~~~~~v~~~---G~ly~~~~~--- 215 (362)
.+..+... .-+|+++||......+++||+.+++|+..+ . +|. .+..+.+++++ |++|++++.
T Consensus 492 ~h~~~~~~---~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~--~~g~~p~----~r~~~~a~v~~~~~~~iyv~GG~~~~ 562 (695)
T 2zwa_A 492 RHSACSLP---DGNVLILGGVTEGPAMLLYNVTEEIFKDVT--PKDEFFQ----NSLVSAGLEFDPVSKQGIILGGGFMD 562 (695)
T ss_dssp SCEEEECT---TSCEEEECCBCSSCSEEEEETTTTEEEECC--CSSGGGG----SCCBSCEEEEETTTTEEEEECCBCTT
T ss_pred cceEEEEc---CCEEEEECCCCCCCCEEEEECCCCceEEcc--CCCCCCC----cccceeEEEEeCCCCEEEEECCcCCC
Confidence 66655432 227888888654348999999999999887 3 332 23455556767 899999874
Q ss_pred ----CcEEEEEEcCCCe------eecCCCCCcccccCCCCcccccceeecccCC-CeEEEEEEeecCC---ccceEEEEE
Q 018005 216 ----PFSIVRFDLENGI------WETPNDANDHMTMMLPHELTFFRLVNDGEES-NKLYLIGGVGRNG---ISTTMKLWE 281 (362)
Q Consensus 216 ----~~~i~~~D~~~~~------w~~~~~p~~~~~~~~p~~~~~~~lv~~~~~~-G~L~vv~~~~~~~---~~~~i~vw~ 281 (362)
...+.+||+.+++ |+.+... .+..+..+.+++ .+ |+||++||..... ....+.+|.
T Consensus 563 ~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~-------p~~~R~~~~~~~---~~~~~iyv~GG~~~~~~~~~~~~v~~yd 632 (695)
T 2zwa_A 563 QTTVSDKAIIFKYDAENATEPITVIKKLQH-------PLFQRYGSQIKY---ITPRKLLIVGGTSPSGLFDRTNSIISLD 632 (695)
T ss_dssp SSCBCCEEEEEEECTTCSSCCEEEEEEEEC-------GGGCCBSCEEEE---EETTEEEEECCBCSSCCCCTTTSEEEEE
T ss_pred CCeeeCcEEEEEccCCccccceEEEEcCCC-------CCCCcccceEEE---eCCCEEEEECCccCCCCCCCCCeEEEEE
Confidence 2468999999999 7765311 123344455553 67 9999999965332 245566664
Q ss_pred ECCCCCEEEEecccHH
Q 018005 282 LGCGGNWIEVERVPEM 297 (362)
Q Consensus 282 l~~~~~W~~v~~~p~~ 297 (362)
+ ..+.|+.+ .+|..
T Consensus 633 ~-~t~~W~~~-~~p~~ 646 (695)
T 2zwa_A 633 P-LSETLTSI-PISRR 646 (695)
T ss_dssp T-TTTEEEEC-CCCHH
T ss_pred C-CCCeEEEe-ecccc
Confidence 4 23459943 55543
No 18
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.52 E-value=1.6e-12 Score=127.96 Aligned_cols=205 Identities=12% Similarity=0.065 Sum_probs=132.5
Q ss_pred eeeeeeCCCCCeEeec-CCcCCCCCCceEEEecCCceEEEecC-CCCeEEEEeCCcCceeeccCCCCCCccceEEEEeCC
Q 018005 77 QYPLYDSTHGTWRRLS-LPYSLLLPSAATLLSSSKGLLCFSLP-SSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTP 154 (362)
Q Consensus 77 ~~~~~d~~~~~w~~~~-~~~~~~~~~~~~~~~s~~Gll~~~~~-~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~ 154 (362)
.+..||+..++|..++ ++.. ............+|.|++.++ ....+.+|||.|++|..+++++.+|..+..+...+
T Consensus 220 ~~~~yd~~t~~w~~~~~~~~~-~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~d- 297 (656)
T 1k3i_A 220 LTSSWDPSTGIVSDRTVTVTK-HDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSD- 297 (656)
T ss_dssp EEEEECTTTCCBCCCEEEECS-CCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTT-
T ss_pred EEEEEeCCCCcEEeCcccCCC-CCCccccccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecC-
Confidence 4678999999998875 2211 111222234457887777766 34589999999999999999888776655544322
Q ss_pred CceEEEEEeee-c---CCCeEEEEeCCCCcccccccC---CCCcccc-----c---------------------------
Q 018005 155 SGYKIFMLFAK-S---FPNYAFVYDSTDQSWSKFDID---GFPSMIL-----S--------------------------- 195 (362)
Q Consensus 155 ~~ykv~~~~~~-~---~~~~~~vy~s~~~~W~~~~~~---~~p~~~~-----~--------------------------- 195 (362)
-+|+++||. . ....+++||+.+++|+..+.. .++.... .
T Consensus 298 --g~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd 375 (656)
T 1k3i_A 298 --GRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYY 375 (656)
T ss_dssp --SCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEE
T ss_pred --CeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeee
Confidence 278888883 2 134899999999999886310 1211000 0
Q ss_pred ---------------------cCCCcccEE---ECCEEEEEecCC--------c---EEEEEEcCCCeeecCC-CCCccc
Q 018005 196 ---------------------QSSHQEGVF---YKGSLYFTTPEP--------F---SIVRFDLENGIWETPN-DANDHM 239 (362)
Q Consensus 196 ---------------------~~~~~~~v~---~~G~ly~~~~~~--------~---~i~~~D~~~~~w~~~~-~p~~~~ 239 (362)
......++. .+|++|++++.. . .+.+||+.+++|..+. .+
T Consensus 376 ~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~---- 451 (656)
T 1k3i_A 376 TSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNG---- 451 (656)
T ss_dssp CSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTC----
T ss_pred cCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCC----
Confidence 000112222 389999998731 1 6889999999998763 23
Q ss_pred ccCCCCcccccceeecccCCCeEEEEEEeecC------CccceEEEEEECCCCCEEEEeccc
Q 018005 240 TMMLPHELTFFRLVNDGEESNKLYLIGGVGRN------GISTTMKLWELGCGGNWIEVERVP 295 (362)
Q Consensus 240 ~~~~p~~~~~~~lv~~~~~~G~L~vv~~~~~~------~~~~~i~vw~l~~~~~W~~v~~~p 295 (362)
||..+..+..++. .+|+||+++|.... .....+++|+.+ .+.|+.+..++
T Consensus 452 ---mp~~R~~~~~~~l--~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~-t~~W~~~~~~~ 507 (656)
T 1k3i_A 452 ---LYFARTFHTSVVL--PDGSTFITGGQRRGIPFEDSTPVFTPEIYVPE-QDTFYKQNPNS 507 (656)
T ss_dssp ---CSSCCBSCEEEEC--TTSCEEEECCBSBCCTTCCCSBCCCCEEEEGG-GTEEEECCCCS
T ss_pred ---CCCCcccCCeEEC--CCCCEEEECCcccCcCcCCCCcccceEEEcCC-CCceeecCCCC
Confidence 6776665554431 39999999985421 123567788652 34599988775
No 19
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=99.13 E-value=2.6e-11 Score=77.42 Aligned_cols=44 Identities=32% Similarity=0.511 Sum_probs=38.4
Q ss_pred ChhhhcCCCHHHHHHHHccCChhhhhhhhccchhhhhhccCccc
Q 018005 9 DPAIWSRLPEDLLDHVLSFLPPKMLLKLRSTCKHFNSLLFSPSF 52 (362)
Q Consensus 9 ~~~~~~~LP~dll~~IL~rLp~~~l~~~r~VcK~W~~~i~~~~F 52 (362)
++..|..||+|++.+||++||.+++.++++|||+|+.++.++.|
T Consensus 5 ~~~~~~~LP~eil~~I~~~L~~~dl~~~~~Vck~w~~~~~~~~l 48 (53)
T 1fs1_A 5 PGVSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESL 48 (53)
T ss_dssp ----CCSSCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHHTCGGG
T ss_pred CCCCHHHCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHH
Confidence 45678999999999999999999999999999999999998765
No 20
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.99 E-value=3.7e-07 Score=85.36 Aligned_cols=41 Identities=10% Similarity=0.277 Sum_probs=37.9
Q ss_pred ChhhhcCCCHHHHHHHHccCChhhhhhhhccchhhhhhccC
Q 018005 9 DPAIWSRLPEDLLDHVLSFLPPKMLLKLRSTCKHFNSLLFS 49 (362)
Q Consensus 9 ~~~~~~~LP~dll~~IL~rLp~~~l~~~r~VcK~W~~~i~~ 49 (362)
....++.||+|++.+||++|++++|++++.|||.|+.++.+
T Consensus 11 ~~d~~~~lp~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~ 51 (464)
T 3v7d_B 11 KRDLITSLPFEISLKIFNYLQFEDIINSLGVSQNWNKIIRK 51 (464)
T ss_dssp CCCHHHHSCHHHHHHHHTTSCHHHHHHHHTTCHHHHHHHTT
T ss_pred ccCChHHCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcC
Confidence 34568899999999999999999999999999999999987
No 21
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=98.93 E-value=1.7e-10 Score=100.05 Aligned_cols=52 Identities=25% Similarity=0.293 Sum_probs=46.5
Q ss_pred CChhhhcCCCHHHHHHHHccCChhhhh-hhhccchhhhhhccCcccccccccc
Q 018005 8 MDPAIWSRLPEDLLDHVLSFLPPKMLL-KLRSTCKHFNSLLFSPSFLSKTKCS 59 (362)
Q Consensus 8 ~~~~~~~~LP~dll~~IL~rLp~~~l~-~~r~VcK~W~~~i~~~~F~~~~~~~ 59 (362)
++...+..||+||+.+||+|||+++|+ ++++|||+|+++++++.|-+.+..+
T Consensus 46 ~~~~~~~~LP~ell~~Il~~Lp~~~L~~r~~~VCk~Wr~l~~~~~~w~~~~~~ 98 (297)
T 2e31_A 46 EAVEYLAELPEPLLLRVLAELPATELVQACRLVCLRWKELVDGAPLWLLKCQQ 98 (297)
T ss_dssp -CCCCTTSSCHHHHHHHHHTSCHHHHHHTGGGTCHHHHHHHTSHHHHHHHHHH
T ss_pred ccccChhhCCHHHHHHHHHcCCHHHHHHHHHHHhHHHHHHhcChHHHHHHhhc
Confidence 345578899999999999999999999 9999999999999999998877654
No 22
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.90 E-value=1.5e-07 Score=87.72 Aligned_cols=239 Identities=17% Similarity=0.124 Sum_probs=116.1
Q ss_pred hhhhcCCCHHHHHHHHccCChhhhhhhhccchhhhhhccCcccccccccc-CCCcceEEEEecCCCC----cee-eeee-
Q 018005 10 PAIWSRLPEDLLDHVLSFLPPKMLLKLRSTCKHFNSLLFSPSFLSKTKCS-SSAFSCFILLSHPQCY----DQY-PLYD- 82 (362)
Q Consensus 10 ~~~~~~LP~dll~~IL~rLp~~~l~~~r~VcK~W~~~i~~~~F~~~~~~~-~~~~~~~l~~~~~~~~----~~~-~~~d- 82 (362)
...++.||+|++.+||++|++++|.++++|||+|+.++.++.+-+..... .-..+...-....... ..+ ..|-
T Consensus 16 ~d~~~~lp~e~~~~i~~~l~~~~l~~~~~v~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wk~~~~~ 95 (445)
T 2ovr_B 16 RDFISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLHIKRRKVIKPGFIHSPWKSAYIR 95 (445)
T ss_dssp CSTTTSSCHHHHHHHHTTSCHHHHHHHTTSCHHHHHHHTCSHHHHHHHTTTTCCSCCCCCC--CCSSCCCCCHHHHHHHH
T ss_pred CChhHHCCHHHHHHHHHhCCHHHHHHHHHHhHHHHhhcCchhHhhhheeecccccccccccceecCCCccCCcHHHHHhh
Confidence 34678999999999999999999999999999999999876543322211 0000000000000000 000 0000
Q ss_pred --CCCCCeEeecC--CcCCCC--CCceEEEecCCceEEEecCCCCeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCc
Q 018005 83 --STHGTWRRLSL--PYSLLL--PSAATLLSSSKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSG 156 (362)
Q Consensus 83 --~~~~~w~~~~~--~~~~~~--~~~~~~~~s~~Gll~~~~~~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ 156 (362)
.....|..-.. ...+.. ......+...+.+++... .++.+.+||..+++....-. ........+.+..
T Consensus 96 ~~~~~~~w~~~~~~~~~~l~~h~~~v~~~~~~~g~~l~sg~-~dg~i~vwd~~~~~~~~~~~-~h~~~v~~~~~~~---- 169 (445)
T 2ovr_B 96 QHRIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGS-DDNTLKVWSAVTGKCLRTLV-GHTGGVWSSQMRD---- 169 (445)
T ss_dssp HHHHHHHHHHSCCCCCEEEECSTTSCEEEEEEETTEEEEEE-TTSCEEEEETTTCCEEEECC-CCSSCEEEEEEET----
T ss_pred hhhhhhcccCCCcceeEEecccCCCcEEEEEEcCCEEEEEE-CCCcEEEEECCCCcEEEEEc-CCCCCEEEEEecC----
Confidence 00001111110 000111 111223333444444333 46889999999887543211 1111222333331
Q ss_pred eEEEEEeeecCCCeEEEEeCCCCcccccccCCCCccccccCCCcccEEECCEEEEEecCCcEEEEEEcCCCeeecCCCCC
Q 018005 157 YKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILSQSSHQEGVFYKGSLYFTTPEPFSIVRFDLENGIWETPNDAN 236 (362)
Q Consensus 157 ykv~~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~~~~v~~~G~ly~~~~~~~~i~~~D~~~~~w~~~~~p~ 236 (362)
..++.++ ....+.+||..++.-...- .. .......+..++...+.++....+..||+.+.+-...
T Consensus 170 -~~l~s~~--~dg~i~vwd~~~~~~~~~~----~~----h~~~v~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~---- 234 (445)
T 2ovr_B 170 -NIIISGS--TDRTLKVWNAETGECIHTL----YG----HTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHV---- 234 (445)
T ss_dssp -TEEEEEE--TTSCEEEEETTTTEEEEEE----CC----CSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEE----
T ss_pred -CEEEEEe--CCCeEEEEECCcCcEEEEE----CC----CCCcEEEEEecCCEEEEEeCCCEEEEEECCCCcEEEE----
Confidence 1333333 3468899998876422111 10 0011223444555555566556899999986543221
Q ss_pred cccccCCCCcccccceeecccCCCeEEEEEEeecCCccceEEEEEEC
Q 018005 237 DHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGISTTMKLWELG 283 (362)
Q Consensus 237 ~~~~~~~p~~~~~~~lv~~~~~~G~L~vv~~~~~~~~~~~i~vw~l~ 283 (362)
+.........+ . .+|++++++. ....+.+|+++
T Consensus 235 ------~~~~~~~v~~~-~--~~~~~l~~~~-----~dg~i~iwd~~ 267 (445)
T 2ovr_B 235 ------LMGHVAAVRCV-Q--YDGRRVVSGA-----YDFMVKVWDPE 267 (445)
T ss_dssp ------EECCSSCEEEE-E--ECSSCEEEEE-----TTSCEEEEEGG
T ss_pred ------EcCCcccEEEE-E--ECCCEEEEEc-----CCCEEEEEECC
Confidence 11101111222 2 5677666655 23677888764
No 23
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.76 E-value=7.7e-08 Score=89.47 Aligned_cols=44 Identities=20% Similarity=0.385 Sum_probs=39.2
Q ss_pred CChhhhcCCCHH----HHHHHHccCChhhhhhhhccchhhhhhccCcc
Q 018005 8 MDPAIWSRLPED----LLDHVLSFLPPKMLLKLRSTCKHFNSLLFSPS 51 (362)
Q Consensus 8 ~~~~~~~~LP~d----ll~~IL~rLp~~~l~~~r~VcK~W~~~i~~~~ 51 (362)
+....++.||+| |+.+||++|++++|.++++|||+|+.++.++.
T Consensus 6 ~~~d~~~~lp~e~~~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~ 53 (435)
T 1p22_A 6 LQRDFITALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGM 53 (435)
T ss_dssp SCCCHHHHTGGGTCHHHHHHHHTTCCHHHHHHHHHHCHHHHHHHHHTT
T ss_pred hhcChHHHCCcchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcChH
Confidence 344577899999 99999999999999999999999999998654
No 24
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=97.94 E-value=2.1e-06 Score=73.64 Aligned_cols=43 Identities=35% Similarity=0.476 Sum_probs=39.3
Q ss_pred hhhhcCCCHHHHHHHHccCChhhhhhhhccchhhhhhccCccc
Q 018005 10 PAIWSRLPEDLLDHVLSFLPPKMLLKLRSTCKHFNSLLFSPSF 52 (362)
Q Consensus 10 ~~~~~~LP~dll~~IL~rLp~~~l~~~r~VcK~W~~~i~~~~F 52 (362)
|..+..||+|++.+||+.|++++|+++.+|||+||.+.+++..
T Consensus 2 ~~~l~~LP~ei~l~IlsfL~p~DL~~l~~vcr~Wr~la~D~~L 44 (312)
T 3l2o_B 2 ASTLTRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPIL 44 (312)
T ss_dssp CCHHHHSCHHHHHHHHHTSCHHHHHHHHTTCHHHHHHHTCHHH
T ss_pred cchhHhCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccchH
Confidence 3457899999999999999999999999999999999998754
No 25
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=97.70 E-value=1.4e-05 Score=71.39 Aligned_cols=44 Identities=32% Similarity=0.511 Sum_probs=38.7
Q ss_pred ChhhhcCCCHHHHHHHHccCChhhhhhhhccchhhhhhccCccc
Q 018005 9 DPAIWSRLPEDLLDHVLSFLPPKMLLKLRSTCKHFNSLLFSPSF 52 (362)
Q Consensus 9 ~~~~~~~LP~dll~~IL~rLp~~~l~~~r~VcK~W~~~i~~~~F 52 (362)
+...|+.||+|++.+||++|+.+++.+++.|||+|+.+..++..
T Consensus 5 ~~~~~~~LP~eil~~If~~L~~~d~~~~~~vc~~W~~~~~~~~~ 48 (336)
T 2ast_B 5 PGVSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESL 48 (336)
T ss_dssp --CCSSSSCHHHHHHHHTTSCHHHHHHTTSSCHHHHHHHTCSTT
T ss_pred ccCChhhCCHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCchh
Confidence 45678999999999999999999999999999999999876653
No 26
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.42 E-value=4.6e-05 Score=73.57 Aligned_cols=39 Identities=31% Similarity=0.542 Sum_probs=29.4
Q ss_pred CChhhhcCCCHHHHHHHHccCC-hhhhhhhhccchhhhhh
Q 018005 8 MDPAIWSRLPEDLLDHVLSFLP-PKMLLKLRSTCKHFNSL 46 (362)
Q Consensus 8 ~~~~~~~~LP~dll~~IL~rLp-~~~l~~~r~VcK~W~~~ 46 (362)
|+...|+.||+|++.+||++|| .+++.+++.|||+|+.+
T Consensus 1 ~~~d~~~~LPdevL~~If~~L~~~~d~~~~s~vck~W~~~ 40 (594)
T 2p1m_B 1 MQKRIALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEI 40 (594)
T ss_dssp ---------CHHHHHHHHHTCCCHHHHHHHHTSCHHHHHH
T ss_pred CcccchhhCCHHHHHHHHhhcCCchhHHHHHHHHHHHHHh
Confidence 4567899999999999999999 99999999999999988
No 27
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=96.55 E-value=0.36 Score=42.33 Aligned_cols=183 Identities=8% Similarity=-0.006 Sum_probs=96.4
Q ss_pred CCeEEEEeCCcCceeec-cC--CCCC--CccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCccc-ccccCCCCccc
Q 018005 120 SSSFLVCNLVTLSSRTI-DF--PTYP--FDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWS-KFDIDGFPSMI 193 (362)
Q Consensus 120 ~~~~~v~NP~t~~w~~l-P~--~~~~--~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~-~~~~~~~p~~~ 193 (362)
...+.++||.|++...- .. -..+ .....+.+... +++++.. ....+.++|..+++-. ..+ ...
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~~----~lyv~~~--~~~~v~viD~~t~~~~~~i~--~~~--- 84 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRDG----IGWIVVN--NSHVIFAIDINTFKEVGRIT--GFT--- 84 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEETT----EEEEEEG--GGTEEEEEETTTCCEEEEEE--CCS---
T ss_pred CceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEECC----EEEEEEc--CCCEEEEEECcccEEEEEcC--CCC---
Confidence 46899999999987541 10 0011 11122333322 5665543 3458999999887542 222 111
Q ss_pred cccCCCcccEE-ECCEEEEEecCCcEEEEEEcCCCeeec-CCCCCcccccCCCCc-ccccceeecccCCCeEEEEEEeec
Q 018005 194 LSQSSHQEGVF-YKGSLYFTTPEPFSIVRFDLENGIWET-PNDANDHMTMMLPHE-LTFFRLVNDGEESNKLYLIGGVGR 270 (362)
Q Consensus 194 ~~~~~~~~~v~-~~G~ly~~~~~~~~i~~~D~~~~~w~~-~~~p~~~~~~~~p~~-~~~~~lv~~~~~~G~L~vv~~~~~ 270 (362)
.....++ -+|++|+.......+.++|+++.+... +.... .... ..-..+.. .+|+||+...
T Consensus 85 ----~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~------~~~~~~~p~~i~~---~~~~lyv~~~--- 148 (328)
T 3dsm_A 85 ----SPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPD------MDMESGSTEQMVQ---YGKYVYVNCW--- 148 (328)
T ss_dssp ----SEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTT------CCTTTCBCCCEEE---ETTEEEEEEC---
T ss_pred ----CCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCC------ccccCCCcceEEE---ECCEEEEEcC---
Confidence 1112233 579999887555689999999876542 22110 0000 01223442 5888998853
Q ss_pred CCccceEEEEEECCCCCEEEEecccHHHHHHhhhccccCCccEEEEeeCCEEEEEeecC----------CeEEEEECCCC
Q 018005 271 NGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYTW----------PEILYYNVARR 340 (362)
Q Consensus 271 ~~~~~~i~vw~l~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~----------~~v~~yd~~~~ 340 (362)
+....+.+++++ .++.. .+++. .....-..+..++.+|+..... ..+.++|++++
T Consensus 149 -~~~~~v~viD~~-t~~~~--~~i~~-----------g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~ 213 (328)
T 3dsm_A 149 -SYQNRILKIDTE-TDKVV--DELTI-----------GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETF 213 (328)
T ss_dssp -TTCCEEEEEETT-TTEEE--EEEEC-----------SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTT
T ss_pred -CCCCEEEEEECC-CCeEE--EEEEc-----------CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCC
Confidence 123567777553 23322 22210 0001111233456677765433 57999999998
Q ss_pred ceEE
Q 018005 341 TWHW 344 (362)
Q Consensus 341 ~w~~ 344 (362)
+...
T Consensus 214 ~v~~ 217 (328)
T 3dsm_A 214 TVEK 217 (328)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 7664
No 28
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=96.34 E-value=0.38 Score=40.32 Aligned_cols=151 Identities=12% Similarity=0.032 Sum_probs=88.0
Q ss_pred EEEEEeeecCCCeEEEEeCCCCcccccccCCCCccccccCCC-cccEEECCEEEEEecCCcEEEEEEcCCCeee-cCCCC
Q 018005 158 KIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILSQSSH-QEGVFYKGSLYFTTPEPFSIVRFDLENGIWE-TPNDA 235 (362)
Q Consensus 158 kv~~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~-~~~v~~~G~ly~~~~~~~~i~~~D~~~~~w~-~~~~p 235 (362)
.++...+......+.++|.++++=...- .++. ... ...+..++.+|.++.....+.+||+++.+-. .+.
T Consensus 32 ~LyestG~~g~S~v~~vD~~tgkv~~~~--~l~~-----~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~~ti~-- 102 (243)
T 3mbr_X 32 HLYESTGETGRSSVRKVDLETGRILQRA--EVPP-----PYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTPRARFR-- 102 (243)
T ss_dssp EEEEEECCTTSCEEEEEETTTCCEEEEE--ECCT-----TCCEEEEEEETTEEEEEESSSSEEEEEETTTTEEEEEEE--
T ss_pred EEEEECCCCCCceEEEEECCCCCEEEEE--eCCC-----CcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcEEEEEe--
Confidence 6776666555679999999988654333 2332 122 2345568899999988889999999886543 322
Q ss_pred CcccccCCCCcccccceeecccCCCeEEEEEEeecCCccceEEEEEECCCCCEEEEecccHHHHHHhhhccccCCccEEE
Q 018005 236 NDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYC 315 (362)
Q Consensus 236 ~~~~~~~~p~~~~~~~lv~~~~~~G~L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~ 315 (362)
.+ .....|.. -+++|++..+ ..+ ++.+|..+. ..+.+++... .+..+...+.+.+
T Consensus 103 -------~~--~~Gwglt~---dg~~L~vSdg------s~~--l~~iDp~t~-~~~~~I~V~~----~g~~~~~lNeLe~ 157 (243)
T 3mbr_X 103 -------YP--GEGWALTS---DDSHLYMSDG------TAV--IRKLDPDTL-QQVGSIKVTA----GGRPLDNLNELEW 157 (243)
T ss_dssp -------CS--SCCCEEEE---CSSCEEEECS------SSE--EEEECTTTC-CEEEEEECEE----TTEECCCEEEEEE
T ss_pred -------CC--CCceEEee---CCCEEEEECC------CCe--EEEEeCCCC-eEEEEEEEcc----CCcccccceeeEE
Confidence 22 13345652 4566777754 234 555565432 2222221100 0000011123333
Q ss_pred EeeCCEEEEEeecCCeEEEEECCCCceEE
Q 018005 316 FWHQGMICVCCYTWPEILYYNVARRTWHW 344 (362)
Q Consensus 316 ~~~~~~i~~~~~~~~~v~~yd~~~~~w~~ 344 (362)
.++.||+....++.|.+-|+++++-..
T Consensus 158 --~~G~lyanvw~s~~I~vIDp~tG~V~~ 184 (243)
T 3mbr_X 158 --VNGELLANVWLTSRIARIDPASGKVVA 184 (243)
T ss_dssp --ETTEEEEEETTTTEEEEECTTTCBEEE
T ss_pred --eCCEEEEEECCCCeEEEEECCCCCEEE
Confidence 367899887778899999999986544
No 29
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=96.30 E-value=0.0011 Score=63.71 Aligned_cols=34 Identities=15% Similarity=0.379 Sum_probs=31.8
Q ss_pred cCCCHHHHHHHHccC-Chhhhhhhhccchhhhhhc
Q 018005 14 SRLPEDLLDHVLSFL-PPKMLLKLRSTCKHFNSLL 47 (362)
Q Consensus 14 ~~LP~dll~~IL~rL-p~~~l~~~r~VcK~W~~~i 47 (362)
+.||+|++.+||++| +.+++.+++.|||+|+.+.
T Consensus 14 ~~LPdeil~~I~~~L~~~~d~~~~s~vck~W~~~~ 48 (592)
T 3ogk_B 14 VATVDDVIEQVMTYITDPKDRDSASLVCRRWFKID 48 (592)
T ss_dssp CCCGGGTHHHHHTTCCCHHHHHHHTTSCHHHHHHH
T ss_pred CCCCHHHHHHHHHhcCCHHHHHHHHHHhHHHHHhh
Confidence 579999999999999 8999999999999999874
No 30
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=96.22 E-value=0.51 Score=40.57 Aligned_cols=207 Identities=12% Similarity=0.091 Sum_probs=104.2
Q ss_pred CceEEEecCCCCeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCcccccccCCC
Q 018005 110 KGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGF 189 (362)
Q Consensus 110 ~Gll~~~~~~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~~~~~ 189 (362)
+|-+++.....+.++.+||.+++...+... ....+++++..+. +++.. ...+.+||..+++.+... ..
T Consensus 24 ~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~---~~~~~i~~~~dG~---l~v~~----~~~l~~~d~~~g~~~~~~--~~ 91 (297)
T 3g4e_A 24 SNSLLFVDIPAKKVCRWDSFTKQVQRVTMD---APVSSVALRQSGG---YVATI----GTKFCALNWKEQSAVVLA--TV 91 (297)
T ss_dssp TTEEEEEETTTTEEEEEETTTCCEEEEECS---SCEEEEEEBTTSS---EEEEE----TTEEEEEETTTTEEEEEE--EC
T ss_pred CCEEEEEECCCCEEEEEECCCCcEEEEeCC---CceEEEEECCCCC---EEEEE----CCeEEEEECCCCcEEEEE--ec
Confidence 444444444457889999999876554322 1223445544333 33322 257899999998887654 22
Q ss_pred CccccccCCCcccEEE--CCEEEEEec-----------CCcEEEEEEcCCCeeecCCCCCcccccCCCCcccccceeecc
Q 018005 190 PSMILSQSSHQEGVFY--KGSLYFTTP-----------EPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDG 256 (362)
Q Consensus 190 p~~~~~~~~~~~~v~~--~G~ly~~~~-----------~~~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~~~lv~~~ 256 (362)
+. ..+. .....+.+ +|.+|+.+. ....+..+|+... ...+.... -.|. .+...
T Consensus 92 ~~-~~~~-~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~-~~~~~~~~-----~~pn-----gi~~s- 157 (297)
T 3g4e_A 92 DN-DKKN-NRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHH-VKKYFDQV-----DISN-----GLDWS- 157 (297)
T ss_dssp CT-TCSS-EEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSC-EEEEEEEE-----SBEE-----EEEEC-
T ss_pred CC-CCCC-CCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCC-EEEEeecc-----cccc-----ceEEc-
Confidence 11 0111 11223333 688877542 1235777777532 22211000 0121 23211
Q ss_pred cCCCe-EEEEEEeecCCccceEEEEEEC-CCCCEEE---EecccHHHHHHhhhccccCCccEEEEeeCCEEEEEeecCCe
Q 018005 257 EESNK-LYLIGGVGRNGISTTMKLWELG-CGGNWIE---VERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYTWPE 331 (362)
Q Consensus 257 ~~~G~-L~vv~~~~~~~~~~~i~vw~l~-~~~~W~~---v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 331 (362)
-+|+ ||++.. ....|.+|.++ .++.... +..++.. . ....-.++..++.|++.....+.
T Consensus 158 -pdg~~lyv~~~-----~~~~i~~~~~d~~~G~~~~~~~~~~~~~~-----~-----~~p~g~~~d~~G~lwva~~~~~~ 221 (297)
T 3g4e_A 158 -LDHKIFYYIDS-----LSYSVDAFDYDLQTGQISNRRSVYKLEKE-----E-----QIPDGMCIDAEGKLWVACYNGGR 221 (297)
T ss_dssp -TTSCEEEEEEG-----GGTEEEEEEECTTTCCEEEEEEEEECCGG-----G-----CEEEEEEEBTTSCEEEEEETTTE
T ss_pred -CCCCEEEEecC-----CCCcEEEEeccCCCCcccCcEEEEECCCC-----C-----CCCCeeEECCCCCEEEEEcCCCE
Confidence 4565 666654 34678888876 3444321 2223210 0 01111233345678888766778
Q ss_pred EEEEECCCCceEEcCCCCCCCCCCCcce
Q 018005 332 ILYYNVARRTWHWLPSCPSLPHKWSCGF 359 (362)
Q Consensus 332 v~~yd~~~~~w~~~~~~~~~~~~~~~~~ 359 (362)
|..||+++++....-..|. ....+|.|
T Consensus 222 v~~~d~~tG~~~~~i~~p~-~~~t~~~f 248 (297)
T 3g4e_A 222 VIRLDPVTGKRLQTVKLPV-DKTTSCCF 248 (297)
T ss_dssp EEEECTTTCCEEEEEECSS-SBEEEEEE
T ss_pred EEEEcCCCceEEEEEECCC-CCceEEEE
Confidence 9999999876544322331 23344555
No 31
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.19 E-value=0.59 Score=41.02 Aligned_cols=190 Identities=10% Similarity=0.139 Sum_probs=94.8
Q ss_pred CCCeEEEEeCCcCceeeccCCC-CCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCcccccccCCCCccccccC
Q 018005 119 SSSSFLVCNLVTLSSRTIDFPT-YPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILSQS 197 (362)
Q Consensus 119 ~~~~~~v~NP~t~~w~~lP~~~-~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~ 197 (362)
.++.+.+||..+++...+.... .......+.+...... ..++.++ ....+.+||..++.|.... .... ..
T Consensus 31 ~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-~~l~s~~--~dg~v~iwd~~~~~~~~~~--~~~~----~~ 101 (379)
T 3jrp_A 31 SDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFG-TILASCS--YDGKVLIWKEENGRWSQIA--VHAV----HS 101 (379)
T ss_dssp TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGC-SEEEEEE--TTSCEEEEEEETTEEEEEE--EECC----CS
T ss_pred CCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCC-CEEEEec--cCCEEEEEEcCCCceeEee--eecC----CC
Confidence 3567888888755544433222 1122233444322111 2333333 2357899999998876554 2211 01
Q ss_pred CCcccEEE--C--CEEEEEecCCcEEEEEEcCCCeeec-CCCCCcccccCCCCcccccceeec---------ccCCCeEE
Q 018005 198 SHQEGVFY--K--GSLYFTTPEPFSIVRFDLENGIWET-PNDANDHMTMMLPHELTFFRLVND---------GEESNKLY 263 (362)
Q Consensus 198 ~~~~~v~~--~--G~ly~~~~~~~~i~~~D~~~~~w~~-~~~p~~~~~~~~p~~~~~~~lv~~---------~~~~G~L~ 263 (362)
.....+.+ + |.+.+.+.....+..||+.+..-.. ..... ............. +.-+|.++
T Consensus 102 ~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l 175 (379)
T 3jrp_A 102 ASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDA------HAIGVNSASWAPATIEEDGEHNGTKESRKF 175 (379)
T ss_dssp SCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEEC------CTTCEEEEEECCCC----------CTTCEE
T ss_pred cceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecC------CCCceEEEEEcCccccccccccCCCCCCEE
Confidence 11223333 2 5555566655689999987652211 10000 1111111111100 00157777
Q ss_pred EEEEeecCCccceEEEEEECCCCC-EEEEecccHHHHHHhhhccccCCccEEEE--eeC---CEEEEEeecCCeEEEEEC
Q 018005 264 LIGGVGRNGISTTMKLWELGCGGN-WIEVERVPEMMCRKFMSVCYHNYDHVYCF--WHQ---GMICVCCYTWPEILYYNV 337 (362)
Q Consensus 264 vv~~~~~~~~~~~i~vw~l~~~~~-W~~v~~~p~~~~~~~~~~~~~~~~~~~~~--~~~---~~i~~~~~~~~~v~~yd~ 337 (362)
+++.. ...+.+|++..... +..+..+.. +...+.++ ..+ +.+++.....+.+.+||+
T Consensus 176 ~~~~~-----dg~i~i~d~~~~~~~~~~~~~~~~------------h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~ 238 (379)
T 3jrp_A 176 VTGGA-----DNLVKIWKYNSDAQTYVLESTLEG------------HSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQ 238 (379)
T ss_dssp EEEET-----TSCEEEEEEETTTTEEEEEEEECC------------CSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEE
T ss_pred EEEeC-----CCeEEEEEecCCCcceeeEEEEec------------ccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeC
Confidence 77662 36899999965544 776665521 11223222 223 455555556678999999
Q ss_pred CCC
Q 018005 338 ARR 340 (362)
Q Consensus 338 ~~~ 340 (362)
++.
T Consensus 239 ~~~ 241 (379)
T 3jrp_A 239 DNE 241 (379)
T ss_dssp SST
T ss_pred CCC
Confidence 886
No 32
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=96.05 E-value=0.6 Score=41.49 Aligned_cols=187 Identities=11% Similarity=-0.002 Sum_probs=95.6
Q ss_pred eEEEecCCCCeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCcccccccCCCCc
Q 018005 112 LLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPS 191 (362)
Q Consensus 112 ll~~~~~~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~ 191 (362)
.+++.+..++.+.+||..+++....-... ....++++.+.+ -.+++.++ ....+.+||..+++-...- ...
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~--~~~~~~~~s~dg--~~l~~~~~--~d~~i~v~d~~~~~~~~~~--~~~- 73 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVG--SNPMGAVISPDG--TKVYVANA--HSNDVSIIDTATNNVIATV--PAG- 73 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECS--SSEEEEEECTTS--SEEEEEEG--GGTEEEEEETTTTEEEEEE--ECS-
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecC--CCcceEEECCCC--CEEEEECC--CCCeEEEEECCCCeEEEEE--ECC-
Confidence 45555555678999999998764432211 112334444332 24444432 2358899999876543221 111
Q ss_pred cccccCCCcccEEE--CCE-EEEEecCCcEEEEEEcCCCeeecCCCCCcccccCCCCcccccceeecccCCCeEE-EEEE
Q 018005 192 MILSQSSHQEGVFY--KGS-LYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLY-LIGG 267 (362)
Q Consensus 192 ~~~~~~~~~~~v~~--~G~-ly~~~~~~~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~L~-vv~~ 267 (362)
.....+.+ +|. +|+.+.....|.+||+.+.+..... + ..... ..+... -+|+.. +.+.
T Consensus 74 ------~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~-~-------~~~~~--~~~~~s--~dg~~l~~~~~ 135 (391)
T 1l0q_A 74 ------SSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTV-K-------TGKSP--LGLALS--PDGKKLYVTNN 135 (391)
T ss_dssp ------SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE-E-------CSSSE--EEEEEC--TTSSEEEEEET
T ss_pred ------CCccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEE-e-------CCCCc--ceEEEC--CCCCEEEEEeC
Confidence 11122333 354 5555555568999999987654321 1 11111 122211 466644 4442
Q ss_pred eecCCccceEEEEEECCCCCEEEEecccHHHHHHhhhccccCCccEEEEe-eCCEEEEEeecCCeEEEEECCCCceEE
Q 018005 268 VGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCFW-HQGMICVCCYTWPEILYYNVARRTWHW 344 (362)
Q Consensus 268 ~~~~~~~~~i~vw~l~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~v~~yd~~~~~w~~ 344 (362)
....+.+|++. .++........ ......++. .++.+++.....+.+.+||+++++...
T Consensus 136 -----~~~~v~~~d~~-~~~~~~~~~~~-------------~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~ 194 (391)
T 1l0q_A 136 -----GDKTVSVINTV-TKAVINTVSVG-------------RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVID 194 (391)
T ss_dssp -----TTTEEEEEETT-TTEEEEEEECC-------------SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred -----CCCEEEEEECC-CCcEEEEEecC-------------CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEE
Confidence 34688999774 33322211110 011111222 345677766566789999998876544
No 33
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=96.02 E-value=0.66 Score=40.10 Aligned_cols=191 Identities=10% Similarity=0.019 Sum_probs=98.9
Q ss_pred CceEEEecCCCCeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCcccccccCCC
Q 018005 110 KGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGF 189 (362)
Q Consensus 110 ~Gll~~~~~~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~~~~~ 189 (362)
.+.+++.....+.+.++|+.|++....-..+.. .. .+++.+.+. .+++... ....+.+||..++.-.... .
T Consensus 9 ~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~-~~~~s~dg~--~l~~~~~--~~~~i~~~d~~~~~~~~~~---~ 79 (331)
T 3u4y_A 9 SNFGIVVEQHLRRISFFSTDTLEILNQITLGYD-FV-DTAITSDCS--NVVVTSD--FCQTLVQIETQLEPPKVVA---I 79 (331)
T ss_dssp CCEEEEEEGGGTEEEEEETTTCCEEEEEECCCC-EE-EEEECSSSC--EEEEEES--TTCEEEEEECSSSSCEEEE---E
T ss_pred CCEEEEEecCCCeEEEEeCcccceeeeEEccCC-cc-eEEEcCCCC--EEEEEeC--CCCeEEEEECCCCceeEEe---c
Confidence 344555544457899999999987544332211 12 445544332 3444333 2348899999887641111 1
Q ss_pred CccccccCCCcccEEE--CCE-EEEEecCC-c--EEEEEEcCCCeeecCCCCCcccccCCCCcccccceeecccCCCe-E
Q 018005 190 PSMILSQSSHQEGVFY--KGS-LYFTTPEP-F--SIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNK-L 262 (362)
Q Consensus 190 p~~~~~~~~~~~~v~~--~G~-ly~~~~~~-~--~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~-L 262 (362)
.. ......++.+ +|. +| ..... . .+.++|+.+.+.... .+ ..... ..+... -+|+ |
T Consensus 80 ~~----~~~~~~~~~~s~dg~~l~-~~~~~~~~~~i~v~d~~~~~~~~~-~~-------~~~~~--~~~~~s--pdg~~l 142 (331)
T 3u4y_A 80 QE----GQSSMADVDITPDDQFAV-TVTGLNHPFNMQSYSFLKNKFIST-IP-------IPYDA--VGIAIS--PNGNGL 142 (331)
T ss_dssp EE----CSSCCCCEEECTTSSEEE-ECCCSSSSCEEEEEETTTTEEEEE-EE-------CCTTE--EEEEEC--TTSSCE
T ss_pred cc----CCCCccceEECCCCCEEE-EecCCCCcccEEEEECCCCCeEEE-EE-------CCCCc--cceEEC--CCCCEE
Confidence 11 0011221333 454 55 44333 3 799999988765432 11 11111 223222 5676 6
Q ss_pred EEEEEeecCCccce-EEEEEECCCCCEEEE--ecccHHHHHHhhhccccCCccEEEEe-eCCEEEEEeecCCeEEEEECC
Q 018005 263 YLIGGVGRNGISTT-MKLWELGCGGNWIEV--ERVPEMMCRKFMSVCYHNYDHVYCFW-HQGMICVCCYTWPEILYYNVA 338 (362)
Q Consensus 263 ~vv~~~~~~~~~~~-i~vw~l~~~~~W~~v--~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~v~~yd~~ 338 (362)
++... .... +.+|.++..+.-... ..++. .....-..+. .+..+|+.....+.+.+||++
T Consensus 143 ~~~~~-----~~~~~i~~~~~~~~g~~~~~~~~~~~~-----------~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~ 206 (331)
T 3u4y_A 143 ILIDR-----SSANTVRRFKIDADGVLFDTGQEFISG-----------GTRPFNITFTPDGNFAFVANLIGNSIGILETQ 206 (331)
T ss_dssp EEEEE-----TTTTEEEEEEECTTCCEEEEEEEEECS-----------SSSEEEEEECTTSSEEEEEETTTTEEEEEECS
T ss_pred EEEec-----CCCceEEEEEECCCCcEeecCCccccC-----------CCCccceEECCCCCEEEEEeCCCCeEEEEECC
Confidence 66654 2245 999999866552222 11110 1111112222 344688877667789999999
Q ss_pred CCce
Q 018005 339 RRTW 342 (362)
Q Consensus 339 ~~~w 342 (362)
+++.
T Consensus 207 ~~~~ 210 (331)
T 3u4y_A 207 NPEN 210 (331)
T ss_dssp STTS
T ss_pred CCcc
Confidence 8775
No 34
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=96.00 E-value=0.78 Score=40.72 Aligned_cols=217 Identities=9% Similarity=0.019 Sum_probs=108.3
Q ss_pred ceeeeeeCCCCCeEee-cCCcCCCCCCceEEEecCCc-eEEEecCCCCeEEEEeCCcCceeeccCCCCCCccceEEEEeC
Q 018005 76 DQYPLYDSTHGTWRRL-SLPYSLLLPSAATLLSSSKG-LLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVST 153 (362)
Q Consensus 76 ~~~~~~d~~~~~w~~~-~~~~~~~~~~~~~~~~s~~G-ll~~~~~~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~ 153 (362)
..+.++|...++.... ... .....+..+.+| .+++.+..++.+.+||+.+++....-.... ....+++.+.
T Consensus 12 ~~v~v~d~~~~~~~~~~~~~-----~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~--~v~~~~~spd 84 (391)
T 1l0q_A 12 DNISVIDVTSNKVTATIPVG-----SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS--SPQGVAVSPD 84 (391)
T ss_dssp TEEEEEETTTTEEEEEEECS-----SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS--SEEEEEECTT
T ss_pred CEEEEEECCCCeEEEEeecC-----CCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC--CccceEECCC
Confidence 3566778776654332 211 111223334455 565555445789999999988654332221 2234444433
Q ss_pred CCceEEEEEeeecCCCeEEEEeCCCCcccccccCCCCccccccCCCcccEEE--CCE-EEEEecCCcEEEEEEcCCCeee
Q 018005 154 PSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILSQSSHQEGVFY--KGS-LYFTTPEPFSIVRFDLENGIWE 230 (362)
Q Consensus 154 ~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~~~~v~~--~G~-ly~~~~~~~~i~~~D~~~~~w~ 230 (362)
+. .+++.+. ....+.+||..++.-...- ... .....+.+ +|. +|+.+.....+..+|+.+.+..
T Consensus 85 g~--~l~~~~~--~~~~v~v~d~~~~~~~~~~--~~~-------~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~ 151 (391)
T 1l0q_A 85 GK--QVYVTNM--ASSTLSVIDTTSNTVAGTV--KTG-------KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVI 151 (391)
T ss_dssp SS--EEEEEET--TTTEEEEEETTTTEEEEEE--ECS-------SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred CC--EEEEEEC--CCCEEEEEECCCCeEEEEE--eCC-------CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEE
Confidence 22 3443332 3468999999887543221 100 11123333 454 6666665668999999887654
Q ss_pred cCCCCCcccccCCCCcccccceeecccCCCe-EEEEEEeecCCccceEEEEEECCCCCEEEEecccHHHHHHhhhccccC
Q 018005 231 TPNDANDHMTMMLPHELTFFRLVNDGEESNK-LYLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHN 309 (362)
Q Consensus 231 ~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~-L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~~p~~~~~~~~~~~~~~ 309 (362)
... + ..... ..+... -+|+ |++.+. ....+.+|++. .+. .+..++. ..
T Consensus 152 ~~~-~-------~~~~~--~~~~~~--~dg~~l~~~~~-----~~~~v~~~d~~-~~~--~~~~~~~-----------~~ 200 (391)
T 1l0q_A 152 NTV-S-------VGRSP--KGIAVT--PDGTKVYVANF-----DSMSISVIDTV-TNS--VIDTVKV-----------EA 200 (391)
T ss_dssp EEE-E-------CCSSE--EEEEEC--TTSSEEEEEET-----TTTEEEEEETT-TTE--EEEEEEC-----------SS
T ss_pred EEE-e-------cCCCc--ceEEEC--CCCCEEEEEeC-----CCCEEEEEECC-CCe--EEEEEec-----------CC
Confidence 321 1 11111 122211 4565 444433 23678999774 222 2222210 00
Q ss_pred CccEEEEe-eCCEEEEEee--cCCeEEEEECCCCceE
Q 018005 310 YDHVYCFW-HQGMICVCCY--TWPEILYYNVARRTWH 343 (362)
Q Consensus 310 ~~~~~~~~-~~~~i~~~~~--~~~~v~~yd~~~~~w~ 343 (362)
.....++. .+..+++... ..+.+.+||+++++-.
T Consensus 201 ~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~ 237 (391)
T 1l0q_A 201 APSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKIT 237 (391)
T ss_dssp EEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEE
T ss_pred CccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEE
Confidence 00111222 3456666654 4568999999877543
No 35
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=95.94 E-value=0.48 Score=40.12 Aligned_cols=151 Identities=10% Similarity=-0.083 Sum_probs=86.5
Q ss_pred EEEEEeeecCCCeEEEEeCCCCcccccccCCCCccccccCCCcc-cEEECCEEEEEecCCcEEEEEEcCCCeee-cCCCC
Q 018005 158 KIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILSQSSHQE-GVFYKGSLYFTTPEPFSIVRFDLENGIWE-TPNDA 235 (362)
Q Consensus 158 kv~~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~~~-~v~~~G~ly~~~~~~~~i~~~D~~~~~w~-~~~~p 235 (362)
.++...+......+.++|.++++=...- .++. ..... .+..++.+|.++.....+.+||+++.+-. .+.
T Consensus 54 ~LyestG~~g~S~v~~vD~~Tgkv~~~~--~l~~-----~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~-- 124 (262)
T 3nol_A 54 YFYESTGLNGRSSIRKVDIESGKTLQQI--ELGK-----RYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRSFN-- 124 (262)
T ss_dssp EEEEEEEETTEEEEEEECTTTCCEEEEE--ECCT-----TCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEEEEE--
T ss_pred EEEEECCCCCCceEEEEECCCCcEEEEE--ecCC-----ccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEEEE--
Confidence 6777666655568999999988643322 2222 12222 34567899999988789999999875443 332
Q ss_pred CcccccCCCCcccccceeecccCCCeEEEEEEeecCCccceEEEEEECCCCCEEEEecccHHHHHHhhhccccCCccEEE
Q 018005 236 NDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYC 315 (362)
Q Consensus 236 ~~~~~~~~p~~~~~~~lv~~~~~~G~L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~ 315 (362)
.+. ....+.. -++.|++..+ .. .++.+|..+. +.+.+++... .+..+...+.+.+
T Consensus 125 -------~~~--eG~glt~---dg~~L~~SdG------s~--~i~~iDp~T~-~v~~~I~V~~----~g~~~~~lNELe~ 179 (262)
T 3nol_A 125 -------YDG--EGWGLTH---NDQYLIMSDG------TP--VLRFLDPESL-TPVRTITVTA----HGEELPELNELEW 179 (262)
T ss_dssp -------CSS--CCCCEEE---CSSCEEECCS------SS--EEEEECTTTC-SEEEEEECEE----TTEECCCEEEEEE
T ss_pred -------CCC--CceEEec---CCCEEEEECC------CC--eEEEEcCCCC-eEEEEEEecc----CCccccccceeEE
Confidence 221 3345552 3455666643 13 3566665532 1222221100 0000011122333
Q ss_pred EeeCCEEEEEeecCCeEEEEECCCCceEE
Q 018005 316 FWHQGMICVCCYTWPEILYYNVARRTWHW 344 (362)
Q Consensus 316 ~~~~~~i~~~~~~~~~v~~yd~~~~~w~~ 344 (362)
.++.||+.....+.|.+-|+++++-..
T Consensus 180 --~~G~lyan~w~~~~I~vIDp~tG~V~~ 206 (262)
T 3nol_A 180 --VDGEIFANVWQTNKIVRIDPETGKVTG 206 (262)
T ss_dssp --ETTEEEEEETTSSEEEEECTTTCBEEE
T ss_pred --ECCEEEEEEccCCeEEEEECCCCcEEE
Confidence 367899888778899999999986654
No 36
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=95.87 E-value=0.82 Score=39.94 Aligned_cols=245 Identities=11% Similarity=0.061 Sum_probs=114.9
Q ss_pred eeeeeCCCCCeEeecCCcCCCCCCceEEEecCCceEEEecC--CCCeEEEEeCCcCceeeccCCC-CCCccceEEEEeCC
Q 018005 78 YPLYDSTHGTWRRLSLPYSLLLPSAATLLSSSKGLLCFSLP--SSSSFLVCNLVTLSSRTIDFPT-YPFDFELLTLVSTP 154 (362)
Q Consensus 78 ~~~~d~~~~~w~~~~~~~~~~~~~~~~~~~s~~Gll~~~~~--~~~~~~v~NP~t~~w~~lP~~~-~~~~~~~~~~~~~~ 154 (362)
++.+|+..++...+...... .....+..+-+|-+++... ..+.+.+|+..+++...+.... .......+++.+.+
T Consensus 20 v~~~d~~tg~~~~~~~~~~~--~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg 97 (347)
T 3hfq_A 20 QGTLDTTAKTLTNDGLLAAT--QNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEAR 97 (347)
T ss_dssp EEEEETTTTEEEEEEEEEEC--SCCCCEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTT
T ss_pred EEEEcCCCCeEEEeeeeecc--CCcceEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCC
Confidence 44567766665544311111 1112233344554444332 2468999999888765554311 11122345555443
Q ss_pred CceEEEEEeeecCCCeEEEEeCC-CCcccccccCCCCc---ccc--ccCCCcccEEE--CCEEEEEecCCcEEEEEEcC-
Q 018005 155 SGYKIFMLFAKSFPNYAFVYDST-DQSWSKFDIDGFPS---MIL--SQSSHQEGVFY--KGSLYFTTPEPFSIVRFDLE- 225 (362)
Q Consensus 155 ~~ykv~~~~~~~~~~~~~vy~s~-~~~W~~~~~~~~p~---~~~--~~~~~~~~v~~--~G~ly~~~~~~~~i~~~D~~- 225 (362)
. .+++... ....+.+|+.. ++.-+... ..+. .+. ........+.+ +|++|+.......+.+||+.
T Consensus 98 ~--~l~~~~~--~~~~v~v~~~~~~g~~~~~~--~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~ 171 (347)
T 3hfq_A 98 Q--LVYSANY--HKGTAEVMKIAADGALTLTD--TVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSD 171 (347)
T ss_dssp T--EEEEEET--TTTEEEEEEECTTSCEEEEE--EEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECT
T ss_pred C--EEEEEeC--CCCEEEEEEeCCCCCeeecc--eeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECC
Confidence 2 3444332 33578888874 34433322 1110 000 00001122344 68877766655689999998
Q ss_pred CCeeecCCCCCcccccCCCCcccccceeecccCCCe-EEEEEEeecCCccceEEEEEECCC-CCEEEEecccHHHHHHhh
Q 018005 226 NGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNK-LYLIGGVGRNGISTTMKLWELGCG-GNWIEVERVPEMMCRKFM 303 (362)
Q Consensus 226 ~~~w~~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~-L~vv~~~~~~~~~~~i~vw~l~~~-~~W~~v~~~p~~~~~~~~ 303 (362)
+++...+..-. .+.+..-..+... -+|+ |++... ....+.+|.++.. +.++.+..+..... .+.
T Consensus 172 ~g~~~~~~~~~------~~~g~~p~~~~~s--pdg~~l~v~~~-----~~~~v~v~~~~~~~g~~~~~~~~~~~~~-~~~ 237 (347)
T 3hfq_A 172 AGQLSEQSVLT------MEAGFGPRHLVFS--PDGQYAFLAGE-----LSSQIASLKYDTQTGAFTQLGIVKTIPA-DYT 237 (347)
T ss_dssp TSCEEEEEEEE------CCTTCCEEEEEEC--TTSSEEEEEET-----TTTEEEEEEEETTTTEEEEEEEEESSCT-TCC
T ss_pred CCcEEEeeeEE------cCCCCCCceEEEC--CCCCEEEEEeC-----CCCEEEEEEecCCCCceEEeeeeeecCC-CCC
Confidence 45444321000 1111111123222 5787 555543 3478899999753 44655444321000 000
Q ss_pred hccccCCccEEEEe-eCCEEEEEeecCCeEEEEECCC-CceEEcCC
Q 018005 304 SVCYHNYDHVYCFW-HQGMICVCCYTWPEILYYNVAR-RTWHWLPS 347 (362)
Q Consensus 304 ~~~~~~~~~~~~~~-~~~~i~~~~~~~~~v~~yd~~~-~~w~~~~~ 347 (362)
. .....-.++. ++..+|+.....+.+.+||++. ++++.+..
T Consensus 238 ~---~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~ 280 (347)
T 3hfq_A 238 A---HNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQ 280 (347)
T ss_dssp S---CCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEE
T ss_pred C---CCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEE
Confidence 0 0001112233 3456888776677899999873 35555433
No 37
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=95.43 E-value=1.2 Score=39.87 Aligned_cols=135 Identities=10% Similarity=0.048 Sum_probs=73.4
Q ss_pred CCeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCcccccccCCCCccccccCCC
Q 018005 120 SSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILSQSSH 199 (362)
Q Consensus 120 ~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~ 199 (362)
++.+.+||..+++...+-..........+++.+.+ +.+++++ ....+.+||..++.-...- .. ....
T Consensus 112 d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~---~~l~~~~--~dg~i~iwd~~~~~~~~~~----~~----~~~~ 178 (401)
T 4aez_A 112 ERNVYVWNADSGSVSALAETDESTYVASVKWSHDG---SFLSVGL--GNGLVDIYDVESQTKLRTM----AG----HQAR 178 (401)
T ss_dssp TTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTS---SEEEEEE--TTSCEEEEETTTCCEEEEE----CC----CSSC
T ss_pred CCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCC---CEEEEEC--CCCeEEEEECcCCeEEEEe----cC----CCCc
Confidence 57899999999997665544323333344554432 2333333 2357899998776432211 10 0112
Q ss_pred cccEEECCEEEEEecCCcEEEEEEcCCCe--eecCCCCCcccccCCCCcccccceeecccCCCeEEEEEEeecCCccceE
Q 018005 200 QEGVFYKGSLYFTTPEPFSIVRFDLENGI--WETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGISTTM 277 (362)
Q Consensus 200 ~~~v~~~G~ly~~~~~~~~i~~~D~~~~~--w~~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~L~vv~~~~~~~~~~~i 277 (362)
...+..+|...+.++....+..+|+.... -..+. . ...... .+... -+|+++++++ ....+
T Consensus 179 v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~-------~~~~v~--~~~~~--~~~~~l~s~~-----~d~~v 241 (401)
T 4aez_A 179 VGCLSWNRHVLSSGSRSGAIHHHDVRIANHQIGTLQ-G-------HSSEVC--GLAWR--SDGLQLASGG-----NDNVV 241 (401)
T ss_dssp EEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEE-C-------CSSCEE--EEEEC--TTSSEEEEEE-----TTSCE
T ss_pred eEEEEECCCEEEEEcCCCCEEEEecccCcceeeEEc-C-------CCCCee--EEEEc--CCCCEEEEEe-----CCCeE
Confidence 23444567666666666689999997432 11111 1 111111 22211 4777777766 23689
Q ss_pred EEEEECC
Q 018005 278 KLWELGC 284 (362)
Q Consensus 278 ~vw~l~~ 284 (362)
.+|++..
T Consensus 242 ~iwd~~~ 248 (401)
T 4aez_A 242 QIWDARS 248 (401)
T ss_dssp EEEETTC
T ss_pred EEccCCC
Confidence 9998853
No 38
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=95.38 E-value=1.3 Score=38.71 Aligned_cols=237 Identities=9% Similarity=0.116 Sum_probs=114.3
Q ss_pred ceeeeeeCCCCCeEeecC-CcCCCCCCceEEEecCCc-eEEEecCCCCeEEEEeCC-cCceeeccCC---CC---C----
Q 018005 76 DQYPLYDSTHGTWRRLSL-PYSLLLPSAATLLSSSKG-LLCFSLPSSSSFLVCNLV-TLSSRTIDFP---TY---P---- 142 (362)
Q Consensus 76 ~~~~~~d~~~~~w~~~~~-~~~~~~~~~~~~~~s~~G-ll~~~~~~~~~~~v~NP~-t~~w~~lP~~---~~---~---- 142 (362)
..+..||...+....+.. ... ......+..+-+| .|++.....+.+.+|+.. +++...+... .. .
T Consensus 63 ~~v~~~~~~~g~~~~~~~~~~~--~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~ 140 (347)
T 3hfq_A 63 GGIAAWQIDGQTAHKLNTVVAP--GTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDG 140 (347)
T ss_dssp EEEEEEEEETTEEEEEEEEEEE--SCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSS
T ss_pred ceEEEEEecCCcEEEeeeeecC--CCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccC
Confidence 346667775555444321 100 1111222334444 566655445778888874 4443322211 10 0
Q ss_pred CccceEEEEeCCCceEEEEEeeecCCCeEEEEeCC-CCcccccccCCCCccccccCCCcccEEE--CCE-EEEEecCCcE
Q 018005 143 FDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDST-DQSWSKFDIDGFPSMILSQSSHQEGVFY--KGS-LYFTTPEPFS 218 (362)
Q Consensus 143 ~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~-~~~W~~~~~~~~p~~~~~~~~~~~~v~~--~G~-ly~~~~~~~~ 218 (362)
.....+++.+.+. +++... ....+.+|+.. ++...... ... .........+.+ +|+ +|+.......
T Consensus 141 ~~~~~~~~spdg~---l~v~~~--~~~~v~~~~~~~~g~~~~~~--~~~---~~~g~~p~~~~~spdg~~l~v~~~~~~~ 210 (347)
T 3hfq_A 141 SHIHYTDLTPDNR---LAVIDL--GSDKVYVYNVSDAGQLSEQS--VLT---MEAGFGPRHLVFSPDGQYAFLAGELSSQ 210 (347)
T ss_dssp CCEEEEEECTTSC---EEEEET--TTTEEEEEEECTTSCEEEEE--EEE---CCTTCCEEEEEECTTSSEEEEEETTTTE
T ss_pred CCceEEEECCCCc---EEEEeC--CCCEEEEEEECCCCcEEEee--eEE---cCCCCCCceEEECCCCCEEEEEeCCCCE
Confidence 0122345544433 444332 34578899987 55544322 100 000011122333 576 7776655556
Q ss_pred EEEEEcC--CCeeecCCCCCcccccCCCCc----ccccceeecccCCCe-EEEEEEeecCCccceEEEEEECCCCCEEEE
Q 018005 219 IVRFDLE--NGIWETPNDANDHMTMMLPHE----LTFFRLVNDGEESNK-LYLIGGVGRNGISTTMKLWELGCGGNWIEV 291 (362)
Q Consensus 219 i~~~D~~--~~~w~~~~~p~~~~~~~~p~~----~~~~~lv~~~~~~G~-L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v 291 (362)
+.+||.. +.++..+..-. ..|.. .....+... -+|+ ||+... ....+.+|.++..+..+.+
T Consensus 211 v~v~~~~~~~g~~~~~~~~~-----~~~~~~~~~~~~~~i~~s--pdG~~l~v~~~-----~~~~v~v~~~~~~g~~~~~ 278 (347)
T 3hfq_A 211 IASLKYDTQTGAFTQLGIVK-----TIPADYTAHNGAAAIRLS--HDGHFLYVSNR-----GYNTLAVFAVTADGHLTLI 278 (347)
T ss_dssp EEEEEEETTTTEEEEEEEEE-----SSCTTCCSCCEEEEEEEC--TTSCEEEEEEE-----TTTEEEEEEECGGGCEEEE
T ss_pred EEEEEecCCCCceEEeeeee-----ecCCCCCCCCcceeEEEC--CCCCEEEEEeC-----CCCEEEEEEECCCCcEEEe
Confidence 7777765 45554321000 02221 111223222 5777 555543 2478999999755567766
Q ss_pred ecccHHHHHHhhhccccCCccEEEEe-eCCEEEEEeecCCeEEEE--ECCCCceEEcC
Q 018005 292 ERVPEMMCRKFMSVCYHNYDHVYCFW-HQGMICVCCYTWPEILYY--NVARRTWHWLP 346 (362)
Q Consensus 292 ~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~v~~y--d~~~~~w~~~~ 346 (362)
..++.. .....-.++. ++..||+.....+.+.+| |.++++.+.+.
T Consensus 279 ~~~~~~----------~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~~~~ 326 (347)
T 3hfq_A 279 QQISTE----------GDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLSLLQ 326 (347)
T ss_dssp EEEECS----------SSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEE
T ss_pred EEEecC----------CCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEEecc
Confidence 655310 0111122333 345788877656778777 77778777653
No 39
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=95.19 E-value=1.4 Score=38.35 Aligned_cols=228 Identities=14% Similarity=0.114 Sum_probs=116.6
Q ss_pred ceeeeeeCCCCCeEeec-CC-cCCCCCCceEEEecCCceEEEecCCCCeEEEEeCCcCce-eeccCCCCCCccceEEEEe
Q 018005 76 DQYPLYDSTHGTWRRLS-LP-YSLLLPSAATLLSSSKGLLCFSLPSSSSFLVCNLVTLSS-RTIDFPTYPFDFELLTLVS 152 (362)
Q Consensus 76 ~~~~~~d~~~~~w~~~~-~~-~~~~~~~~~~~~~s~~Gll~~~~~~~~~~~v~NP~t~~w-~~lP~~~~~~~~~~~~~~~ 152 (362)
..+..+|+.+++...-- .. ...+......-++..++.+++....++.+.++|+.|++. ..++... ....++++.
T Consensus 17 ~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~---~p~~i~~~~ 93 (328)
T 3dsm_A 17 ATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRDGIGWIVVNNSHVIFAIDINTFKEVGRITGFT---SPRYIHFLS 93 (328)
T ss_dssp BEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEETTEEEEEEGGGTEEEEEETTTCCEEEEEECCS---SEEEEEEEE
T ss_pred ceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEECCEEEEEEcCCCEEEEEECcccEEEEEcCCCC---CCcEEEEeC
Confidence 46788999887654310 00 000111111222234566666554457899999999986 4454322 123444533
Q ss_pred CCCceEEEEEeeecCCCeEEEEeCCCCcccc-cccCCCCccccccCCCcccEEECCEEEEEec-CCcEEEEEEcCCCeee
Q 018005 153 TPSGYKIFMLFAKSFPNYAFVYDSTDQSWSK-FDIDGFPSMILSQSSHQEGVFYKGSLYFTTP-EPFSIVRFDLENGIWE 230 (362)
Q Consensus 153 ~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~-~~~~~~p~~~~~~~~~~~~v~~~G~ly~~~~-~~~~i~~~D~~~~~w~ 230 (362)
. . ++++... ....+.++|..+++-.. .+ .....-........+.-+|.+|+... ....|.++|+++.+..
T Consensus 94 ~--g-~lyv~~~--~~~~v~~iD~~t~~~~~~i~---~g~~~~~~~~p~~i~~~~~~lyv~~~~~~~~v~viD~~t~~~~ 165 (328)
T 3dsm_A 94 D--E-KAYVTQI--WDYRIFIINPKTYEITGYIE---CPDMDMESGSTEQMVQYGKYVYVNCWSYQNRILKIDTETDKVV 165 (328)
T ss_dssp T--T-EEEEEEB--SCSEEEEEETTTTEEEEEEE---CTTCCTTTCBCCCEEEETTEEEEEECTTCCEEEEEETTTTEEE
T ss_pred C--C-eEEEEEC--CCCeEEEEECCCCeEEEEEE---cCCccccCCCcceEEEECCEEEEEcCCCCCEEEEEECCCCeEE
Confidence 3 2 6666552 24689999998875321 11 11000000011223346789998865 3568999999987654
Q ss_pred c-CCCCCcccccCCCCcccccceeecccCCCeEEEEEEeecCCc-----cceEEEEEECCC-CCEEEEecccHHHHHHhh
Q 018005 231 T-PNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGI-----STTMKLWELGCG-GNWIEVERVPEMMCRKFM 303 (362)
Q Consensus 231 ~-~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~L~vv~~~~~~~~-----~~~i~vw~l~~~-~~W~~v~~~p~~~~~~~~ 303 (362)
. +.... .|. .+... -+|+|+++........ ...+.++ |.. ++-.+.-.++.
T Consensus 166 ~~i~~g~------~p~-----~i~~~--~dG~l~v~~~~~~~~~~~~~~~~~v~~i--d~~t~~v~~~~~~~~------- 223 (328)
T 3dsm_A 166 DELTIGI------QPT-----SLVMD--KYNKMWTITDGGYEGSPYGYEAPSLYRI--DAETFTVEKQFKFKL------- 223 (328)
T ss_dssp EEEECSS------CBC-----CCEEC--TTSEEEEEBCCBCTTCSSCBCCCEEEEE--ETTTTEEEEEEECCT-------
T ss_pred EEEEcCC------Ccc-----ceEEc--CCCCEEEEECCCccCCccccCCceEEEE--ECCCCeEEEEEecCC-------
Confidence 3 22110 222 23322 5799888865210000 1345544 433 23332222221
Q ss_pred hccccCCccEEEEe-eCCEEEEEeecCCeEEEEECCCCceE
Q 018005 304 SVCYHNYDHVYCFW-HQGMICVCCYTWPEILYYNVARRTWH 343 (362)
Q Consensus 304 ~~~~~~~~~~~~~~-~~~~i~~~~~~~~~v~~yd~~~~~w~ 343 (362)
+....-.++. +++.+|+... .+.++|+++++..
T Consensus 224 ----g~~p~~la~~~d~~~lyv~~~---~v~~~d~~t~~~~ 257 (328)
T 3dsm_A 224 ----GDWPSEVQLNGTRDTLYWINN---DIWRMPVEADRVP 257 (328)
T ss_dssp ----TCCCEEEEECTTSCEEEEESS---SEEEEETTCSSCC
T ss_pred ----CCCceeEEEecCCCEEEEEcc---EEEEEECCCCcee
Confidence 0111122233 4678888653 8999999988753
No 40
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=95.17 E-value=0.96 Score=37.84 Aligned_cols=139 Identities=16% Similarity=0.074 Sum_probs=81.5
Q ss_pred CceeeeeeCCCCCeEe-ecCCcCCCCCCceEEEecCCceEEEecCCCCeEEEEeCCcCce-eeccCCCCCCccceEEEEe
Q 018005 75 YDQYPLYDSTHGTWRR-LSLPYSLLLPSAATLLSSSKGLLCFSLPSSSSFLVCNLVTLSS-RTIDFPTYPFDFELLTLVS 152 (362)
Q Consensus 75 ~~~~~~~d~~~~~w~~-~~~~~~~~~~~~~~~~~s~~Gll~~~~~~~~~~~v~NP~t~~w-~~lP~~~~~~~~~~~~~~~ 152 (362)
.+.+..+|+.+++-.. ++++. .....-++..++-|+.....++.++++|+.|.+- ..+|... .+.|+..
T Consensus 42 ~S~v~~vD~~tgkv~~~~~l~~----~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~-----~Gwglt~ 112 (243)
T 3mbr_X 42 RSSVRKVDLETGRILQRAEVPP----PYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTPRARFRYPG-----EGWALTS 112 (243)
T ss_dssp SCEEEEEETTTCCEEEEEECCT----TCCEEEEEEETTEEEEEESSSSEEEEEETTTTEEEEEEECSS-----CCCEEEE
T ss_pred CceEEEEECCCCCEEEEEeCCC----CcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcEEEEEeCCC-----CceEEee
Confidence 3567889998876543 44442 1112223444677777766678999999999874 3444332 2334443
Q ss_pred CCCceEEEEEeeecCCCeEEEEeCCCCccc-ccccCCCCccccccCCCcccEEECCEEEEEecCCcEEEEEEcCCCeee
Q 018005 153 TPSGYKIFMLFAKSFPNYAFVYDSTDQSWS-KFDIDGFPSMILSQSSHQEGVFYKGSLYFTTPEPFSIVRFDLENGIWE 230 (362)
Q Consensus 153 ~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~-~~~~~~~p~~~~~~~~~~~~v~~~G~ly~~~~~~~~i~~~D~~~~~w~ 230 (362)
.+ .++++..+ +..+.++|+++.+=. ..+ +.....+........+.+|.+|.-......|.+.|+++++-.
T Consensus 113 dg--~~L~vSdg---s~~l~~iDp~t~~~~~~I~---V~~~g~~~~~lNeLe~~~G~lyanvw~s~~I~vIDp~tG~V~ 183 (243)
T 3mbr_X 113 DD--SHLYMSDG---TAVIRKLDPDTLQQVGSIK---VTAGGRPLDNLNELEWVNGELLANVWLTSRIARIDPASGKVV 183 (243)
T ss_dssp CS--SCEEEECS---SSEEEEECTTTCCEEEEEE---CEETTEECCCEEEEEEETTEEEEEETTTTEEEEECTTTCBEE
T ss_pred CC--CEEEEECC---CCeEEEEeCCCCeEEEEEE---EccCCcccccceeeEEeCCEEEEEECCCCeEEEEECCCCCEE
Confidence 32 25555432 468999999986532 222 111011111112344669999977766678999999987553
No 41
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=95.05 E-value=1 Score=44.56 Aligned_cols=190 Identities=11% Similarity=0.156 Sum_probs=96.2
Q ss_pred CCCeEEEEeCCcCceeeccCCCC-CCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCcccccccCCCCccccccC
Q 018005 119 SSSSFLVCNLVTLSSRTIDFPTY-PFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILSQS 197 (362)
Q Consensus 119 ~~~~~~v~NP~t~~w~~lP~~~~-~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~ 197 (362)
.++.+.|||..++++..+..... .....++.+.+.... ..++.++ ....+.+||..++.|.... .... ..
T Consensus 29 ~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~-~~l~s~s--~Dg~I~vwd~~~~~~~~~~--~~~~----h~ 99 (753)
T 3jro_A 29 SDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFG-TILASCS--YDGKVLIWKEENGRWSQIA--VHAV----HS 99 (753)
T ss_dssp TTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSC-SEEEEEE--TTSCEEEEEEETTEEEEEE--EECC----CS
T ss_pred CCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCC-CEEEEEe--CCCeEEEEECCCCcccccc--cccC----CC
Confidence 35678888887655544433221 122234444433212 2333333 3457899999888776554 2211 01
Q ss_pred CCcccEEE--C--CEEEEEecCCcEEEEEEcCCCeeecC-CCCCcccccCCCCcccccceee---------cccCCCeEE
Q 018005 198 SHQEGVFY--K--GSLYFTTPEPFSIVRFDLENGIWETP-NDANDHMTMMLPHELTFFRLVN---------DGEESNKLY 263 (362)
Q Consensus 198 ~~~~~v~~--~--G~ly~~~~~~~~i~~~D~~~~~w~~~-~~p~~~~~~~~p~~~~~~~lv~---------~~~~~G~L~ 263 (362)
.....+.+ + |...+.++....+..||+.+..-... .... .+.......... .+..+|.++
T Consensus 100 ~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~------~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l 173 (753)
T 3jro_A 100 ASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDA------HAIGVNSASWAPATIEEDGEHNGTKESRKF 173 (753)
T ss_dssp SCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEEC------CSSCEEEEEECCCC---------CGGGCCE
T ss_pred CCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeec------CCCceEEEEecCcccccccccccCCCCCEE
Confidence 11223333 2 66666666666899999876522111 0000 111111111100 000146677
Q ss_pred EEEEeecCCccceEEEEEECCCCC-EEEEecccHHHHHHhhhccccCCccEEEE--eeC---CEEEEEeecCCeEEEEEC
Q 018005 264 LIGGVGRNGISTTMKLWELGCGGN-WIEVERVPEMMCRKFMSVCYHNYDHVYCF--WHQ---GMICVCCYTWPEILYYNV 337 (362)
Q Consensus 264 vv~~~~~~~~~~~i~vw~l~~~~~-W~~v~~~p~~~~~~~~~~~~~~~~~~~~~--~~~---~~i~~~~~~~~~v~~yd~ 337 (362)
++++ ....+.+|++..... +..+..+. .+...+.++ ..+ +.+++.+...+.+.+||+
T Consensus 174 ~sgs-----~dg~I~iwd~~~~~~~~~~~~~~~------------~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~ 236 (753)
T 3jro_A 174 VTGG-----ADNLVKIWKYNSDAQTYVLESTLE------------GHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQ 236 (753)
T ss_dssp EEEE-----TTSCEEEEEEETTTTEEEEEEEEC------------CCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEE
T ss_pred EEEE-----CCCeEEEEeccCCcccceeeeeec------------CCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecC
Confidence 7665 236799999975544 66665542 111223333 223 455666666778999999
Q ss_pred CCC
Q 018005 338 ARR 340 (362)
Q Consensus 338 ~~~ 340 (362)
+++
T Consensus 237 ~~~ 239 (753)
T 3jro_A 237 DNE 239 (753)
T ss_dssp SSS
T ss_pred CCC
Confidence 886
No 42
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=95.00 E-value=1.5 Score=37.67 Aligned_cols=246 Identities=6% Similarity=-0.015 Sum_probs=117.1
Q ss_pred eeeeeeCCCCCe-E-eecCCcCCCCCCceEEEecCCc-eEEEecCCCC--eEEEEeCCcCceeeccCCCCCCccceEEEE
Q 018005 77 QYPLYDSTHGTW-R-RLSLPYSLLLPSAATLLSSSKG-LLCFSLPSSS--SFLVCNLVTLSSRTIDFPTYPFDFELLTLV 151 (362)
Q Consensus 77 ~~~~~d~~~~~w-~-~~~~~~~~~~~~~~~~~~s~~G-ll~~~~~~~~--~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~ 151 (362)
.+..+|+..+.. . .+... ..+... +..+-+| .++......+ .+.+||+.+++....-+.. .....+++.
T Consensus 63 ~i~~~d~~~~~~~~~~~~~~---~~~~~~-~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~--~~~~~~~~s 136 (331)
T 3u4y_A 63 TLVQIETQLEPPKVVAIQEG---QSSMAD-VDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIP--YDAVGIAIS 136 (331)
T ss_dssp EEEEEECSSSSCEEEEEEEC---SSCCCC-EEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECC--TTEEEEEEC
T ss_pred eEEEEECCCCceeEEecccC---CCCccc-eEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECC--CCccceEEC
Confidence 566778776653 2 22211 011121 2334444 5554433223 8999999998865432221 122344554
Q ss_pred eCCCceEEEEEeeecCCCeEEEEeCCCCcccccccCCCCccccccCCCcccEEE--CCE-EEEEecCCcEEEEEEcCCCe
Q 018005 152 STPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILSQSSHQEGVFY--KGS-LYFTTPEPFSIVRFDLENGI 228 (362)
Q Consensus 152 ~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~~~~v~~--~G~-ly~~~~~~~~i~~~D~~~~~ 228 (362)
+.+. + +++.... ....+.+|+...+.-.... . .. ..........+.+ +|+ +|+.......+.+||+.+.+
T Consensus 137 pdg~-~-l~~~~~~-~~~~i~~~~~~~~g~~~~~--~-~~-~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~ 209 (331)
T 3u4y_A 137 PNGN-G-LILIDRS-SANTVRRFKIDADGVLFDT--G-QE-FISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPE 209 (331)
T ss_dssp TTSS-C-EEEEEET-TTTEEEEEEECTTCCEEEE--E-EE-EECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTT
T ss_pred CCCC-E-EEEEecC-CCceEEEEEECCCCcEeec--C-Cc-cccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCc
Confidence 4432 2 4443331 2223777776542210000 0 00 0000011223333 565 77766656689999998765
Q ss_pred e----ecCCCCCcccccCCCCcccccceeecccCCCe-EEEEEEeecCCccceEEEEEECCCCCEEEEecccHHHHHHhh
Q 018005 229 W----ETPNDANDHMTMMLPHELTFFRLVNDGEESNK-LYLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFM 303 (362)
Q Consensus 229 w----~~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~-L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~~p~~~~~~~~ 303 (362)
. ..+. .......+... -+|+ |++... ....+.+|.++ .++.+.+..++.... ..
T Consensus 210 ~~~~~~~~~-----------~~~~~~~~~~s--pdg~~l~v~~~-----~~~~i~~~d~~-~~~~~~~~~~~~~~~--~~ 268 (331)
T 3u4y_A 210 NITLLNAVG-----------TNNLPGTIVVS--RDGSTVYVLTE-----STVDVFNFNQL-SGTLSFVKSFGHGLL--ID 268 (331)
T ss_dssp SCEEEEEEE-----------CSSCCCCEEEC--TTSSEEEEECS-----SEEEEEEEETT-TTEEEEEEEEECCCC--CC
T ss_pred ccceeeecc-----------CCCCCceEEEC--CCCCEEEEEEc-----CCCEEEEEECC-CCceeeecccccccc--cC
Confidence 4 2211 11111122212 5777 555432 23557777663 344444444332100 00
Q ss_pred hccccCCccEEEE-eeCCEEEEEeecCCeEEEEECCCCceEEcCCCCCCCCCCCc
Q 018005 304 SVCYHNYDHVYCF-WHQGMICVCCYTWPEILYYNVARRTWHWLPSCPSLPHKWSC 357 (362)
Q Consensus 304 ~~~~~~~~~~~~~-~~~~~i~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~ 357 (362)
......... .++ .++..+|+.....+.+.+||++++.-..+...+..+...-|
T Consensus 269 ~~~~~~~~~-~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~g~~~~~ 322 (331)
T 3u4y_A 269 PRPLFGANQ-MALNKTETKLFISANISRELKVFTISGKVVGYVAGIEANGGIAIC 322 (331)
T ss_dssp CGGGTTCCC-EEECTTSSEEEEEETTTTEEEEEETTSCEEEECTTCCCBSCEEEC
T ss_pred CCCcccccc-eEECCCCCEEEEecCCCCcEEEEEecCCcccceecccccCCeEEE
Confidence 000000011 233 34567888776677899999999988888777665544444
No 43
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=94.90 E-value=1.5 Score=36.98 Aligned_cols=217 Identities=13% Similarity=0.083 Sum_probs=108.2
Q ss_pred eeeeeeCCCCCeEeecCCcCCCCCCceEEEecCCceEEEecCCCCeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCc
Q 018005 77 QYPLYDSTHGTWRRLSLPYSLLLPSAATLLSSSKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSG 156 (362)
Q Consensus 77 ~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~~s~~Gll~~~~~~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ 156 (362)
.+..+|+. +....+.++.. ......+....+|-+++.......+.++|+ +++...............++++..+
T Consensus 79 ~i~~~~~~-g~~~~~~~~~~--~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g-- 152 (299)
T 2z2n_A 79 KIGRITKK-GIIKEYTLPNP--DSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDN-- 152 (299)
T ss_dssp EEEEECTT-SCEEEEECSST--TCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTS--
T ss_pred eEEEECCC-CcEEEEeCCCc--CCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCC--
Confidence 45667765 44444443311 112222333446766665444578999999 7776655432211222334444332
Q ss_pred eEEEEEeeecCCCeEEEEeCCCCcccccccCCCCccccccCCCcccEEE--CCEEEEEecCCcEEEEEEcCCCeeecCCC
Q 018005 157 YKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILSQSSHQEGVFY--KGSLYFTTPEPFSIVRFDLENGIWETPND 234 (362)
Q Consensus 157 ykv~~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~~~~v~~--~G~ly~~~~~~~~i~~~D~~~~~w~~~~~ 234 (362)
++++... ....+.+||. ++...... .+. .. ....++.+ +|.+|+.......+..||+ +.++..+.
T Consensus 153 -~l~v~~~--~~~~i~~~~~-~g~~~~~~---~~~-~~---~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~- 219 (299)
T 2z2n_A 153 -ALWFTEN--QNNAIGRITE-SGDITEFK---IPT-PA---SGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFK- 219 (299)
T ss_dssp -CEEEEET--TTTEEEEECT-TCCEEEEE---CSS-TT---CCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEE-
T ss_pred -CEEEEeC--CCCEEEEEcC-CCcEEEee---CCC-CC---CcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEE-
Confidence 3444322 2357888988 66665432 111 00 12224444 5888877655568999999 66665543
Q ss_pred CCcccccCCCCcc-cccceeecccCCCeEEEEEEeecCCccceEEEEEECCCCCEEEEecccHHHHHHhhhccccCCccE
Q 018005 235 ANDHMTMMLPHEL-TFFRLVNDGEESNKLYLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHV 313 (362)
Q Consensus 235 p~~~~~~~~p~~~-~~~~lv~~~~~~G~L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~ 313 (362)
.+... .-..+... -+|.|++... ....+.+|.. .+....+. ++.. .....-
T Consensus 220 --------~~~~~~~~~~i~~~--~~g~l~v~~~-----~~~~i~~~d~--~g~~~~~~-~~~~----------~~~~~~ 271 (299)
T 2z2n_A 220 --------IPTPNARPHAITAG--AGIDLWFTEW-----GANKIGRLTS--NNIIEEYP-IQIK----------SAEPHG 271 (299)
T ss_dssp --------CSSTTCCEEEEEEC--STTCEEEEET-----TTTEEEEEET--TTEEEEEE-CSSS----------SCCEEE
T ss_pred --------CCCCCCCceeEEEC--CCCCEEEecc-----CCceEEEECC--CCceEEEe-CCCC----------CCccce
Confidence 22111 11233322 4788888753 1245555543 33322221 1100 001111
Q ss_pred EEEeeCCEEEEEeecCCeEEEEECCCCce
Q 018005 314 YCFWHQGMICVCCYTWPEILYYNVARRTW 342 (362)
Q Consensus 314 ~~~~~~~~i~~~~~~~~~v~~yd~~~~~w 342 (362)
.++ .++.|++... .+.+..||+++++.
T Consensus 272 i~~-~~g~l~v~~~-~~~l~~~~~~~~~~ 298 (299)
T 2z2n_A 272 ICF-DGETIWFAME-CDKIGKLTLIKDNM 298 (299)
T ss_dssp EEE-CSSCEEEEET-TTEEEEEEEC----
T ss_pred EEe-cCCCEEEEec-CCcEEEEEcCcccC
Confidence 223 5677888753 57899999988753
No 44
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=94.81 E-value=1.6 Score=37.05 Aligned_cols=183 Identities=9% Similarity=0.037 Sum_probs=88.7
Q ss_pred ceEEEecCCCCeEEEEeCCcCc--eeeccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCC--ccccccc
Q 018005 111 GLLCFSLPSSSSFLVCNLVTLS--SRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQ--SWSKFDI 186 (362)
Q Consensus 111 Gll~~~~~~~~~~~v~NP~t~~--w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~--~W~~~~~ 186 (362)
|-+++.+...+.+.++|+.|++ |.. +.. .........+.+++ ++++. ....+..||+ ++ .|+...
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~-~~~-~~~~~~~~~~~pdG---~ilvs----~~~~V~~~d~-~G~~~W~~~~- 73 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEIVWEY-PLE-KGWECNSVAATKAG---EILFS----YSKGAKMITR-DGRELWNIAA- 73 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEEEEEE-ECC-TTCCCCEEEECTTS---CEEEE----CBSEEEEECT-TSCEEEEEEC-
T ss_pred CcEEEeeCCCCEEEEEECCCCeEEEEe-CCC-ccCCCcCeEECCCC---CEEEe----CCCCEEEECC-CCCEEEEEcC-
Confidence 3333334346789999999998 433 221 10112233333332 34442 2357889998 44 476543
Q ss_pred CCCCccccccCCCcccEEECCEEEEEecC-CcEEEEEEcCCC-eeecCCCCCcccccCCCCc---ccccceeecccCCCe
Q 018005 187 DGFPSMILSQSSHQEGVFYKGSLYFTTPE-PFSIVRFDLENG-IWETPNDANDHMTMMLPHE---LTFFRLVNDGEESNK 261 (362)
Q Consensus 187 ~~~p~~~~~~~~~~~~v~~~G~ly~~~~~-~~~i~~~D~~~~-~w~~~~~p~~~~~~~~p~~---~~~~~lv~~~~~~G~ 261 (362)
.... . .......-+|.+++.... ...++++|++.+ .|+. ..... .+.. ....... .+|.
T Consensus 74 -~~~~-~----~~~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~~~-~~~~~-----~~~~~~~~~~v~~~----~~G~ 137 (276)
T 3no2_A 74 -PAGC-E----MQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKT-EFETG-----IERPHAQFRQINKN----KKGN 137 (276)
T ss_dssp -CTTC-E----EEEEEECTTSCEEEEEESTTEEEEEECTTSCEEEEE-EECCS-----CSSGGGSCSCCEEC----TTSC
T ss_pred -CCCc-c----ccccEECCCCCEEEEecCCCCEEEEEeCCCCEEEEE-eccCC-----CCcccccccCceEC----CCCC
Confidence 1100 0 111122336777776554 557888888654 3433 11100 1110 0111222 5777
Q ss_pred EEEEEEeecCCccceEEEEEECCCCC--EEEEecccHHHHHHhhhccccCCccEEEEeeCCEEEEEeecCCeEEEEECCC
Q 018005 262 LYLIGGVGRNGISTTMKLWELGCGGN--WIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYTWPEILYYNVAR 339 (362)
Q Consensus 262 L~vv~~~~~~~~~~~i~vw~l~~~~~--W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~v~~yd~~~ 339 (362)
++++.. ....+.+|.. .++ |+.-..- ......+..++.+++.......++++|+++
T Consensus 138 ~lv~~~-----~~~~v~~~d~--~G~~~w~~~~~~---------------~~~~~~~~~~g~~~v~~~~~~~v~~~d~~t 195 (276)
T 3no2_A 138 YLVPLF-----ATSEVREIAP--NGQLLNSVKLSG---------------TPFSSAFLDNGDCLVACGDAHCFVQLNLES 195 (276)
T ss_dssp EEEEET-----TTTEEEEECT--TSCEEEEEECSS---------------CCCEEEECTTSCEEEECBTTSEEEEECTTT
T ss_pred EEEEec-----CCCEEEEECC--CCCEEEEEECCC---------------CccceeEcCCCCEEEEeCCCCeEEEEeCcC
Confidence 776543 2355666644 454 8743321 001112223344555554456799999997
Q ss_pred Cce
Q 018005 340 RTW 342 (362)
Q Consensus 340 ~~w 342 (362)
++.
T Consensus 196 G~~ 198 (276)
T 3no2_A 196 NRI 198 (276)
T ss_dssp CCE
T ss_pred CcE
Confidence 744
No 45
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=94.81 E-value=1.7 Score=37.32 Aligned_cols=219 Identities=8% Similarity=0.012 Sum_probs=105.0
Q ss_pred ecCCc-eEEEecCCCCeEEEEeCC---cCceeeccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCC-Ccc
Q 018005 107 SSSKG-LLCFSLPSSSSFLVCNLV---TLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTD-QSW 181 (362)
Q Consensus 107 ~s~~G-ll~~~~~~~~~~~v~NP~---t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~-~~W 181 (362)
.+-+| .+++.....+.+.+|+.. +++-...-. .......+++.+.+. .+++... ....+.+||..+ +..
T Consensus 91 ~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~--~~~~~~~~~~s~dg~--~l~~~~~--~~~~v~~~d~~~~~~~ 164 (343)
T 1ri6_A 91 TDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVE--GLDGCHSANISPDNR--TLWVPAL--KQDRICLFTVSDDGHL 164 (343)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEEC--CCTTBCCCEECTTSS--EEEEEEG--GGTEEEEEEECTTSCE
T ss_pred EcCCCCEEEEEecCCCeEEEEECCCCcccccccccc--CCCCceEEEECCCCC--EEEEecC--CCCEEEEEEecCCCce
Confidence 34444 565555445778999883 333222111 111223344544322 3443331 235788999876 655
Q ss_pred cccc--cCCCCccccccCCCcccEEE--CCE-EEEEecCCcEEEEEEcC--CCeeecCCCCCcccccCCCCcc----ccc
Q 018005 182 SKFD--IDGFPSMILSQSSHQEGVFY--KGS-LYFTTPEPFSIVRFDLE--NGIWETPNDANDHMTMMLPHEL----TFF 250 (362)
Q Consensus 182 ~~~~--~~~~p~~~~~~~~~~~~v~~--~G~-ly~~~~~~~~i~~~D~~--~~~w~~~~~p~~~~~~~~p~~~----~~~ 250 (362)
.... ....+. . .....+.+ +|. +|+.......+..||+. +.++....... .+|... ...
T Consensus 165 ~~~~~~~~~~~~----~-~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~-----~~~~~~~~~~~~~ 234 (343)
T 1ri6_A 165 VAQDPAEVTTVE----G-AGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLD-----MMPENFSDTRWAA 234 (343)
T ss_dssp EEEEEEEEECST----T-CCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEE-----CSCTTCCSCCCEE
T ss_pred eeecccccccCC----C-CCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeecc-----ccCccccccCCcc
Confidence 4221 000111 0 11122333 464 66666555689999985 34332211000 022211 111
Q ss_pred ceeecccCCCeEEEEEEeecCCccceEEEEEECCCC-CEEEEecccHHHHHHhhhccccCCccEEEE-eeCCEEEEEeec
Q 018005 251 RLVNDGEESNKLYLIGGVGRNGISTTMKLWELGCGG-NWIEVERVPEMMCRKFMSVCYHNYDHVYCF-WHQGMICVCCYT 328 (362)
Q Consensus 251 ~lv~~~~~~G~L~vv~~~~~~~~~~~i~vw~l~~~~-~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~ 328 (362)
.+... -+|+..++.. .....+.+|.++..+ +++.+..++.. ....-.++ ..++.+++....
T Consensus 235 ~i~~s--~dg~~l~v~~----~~~~~i~v~d~~~~~~~~~~~~~~~~~-----------~~~~~~~~s~dg~~l~~~~~~ 297 (343)
T 1ri6_A 235 DIHIT--PDGRHLYACD----RTASLITVFSVSEDGSVLSKEGFQPTE-----------TQPRGFNVDHSGKYLIAAGQK 297 (343)
T ss_dssp EEEEC--TTSSEEEEEE----TTTTEEEEEEECTTSCCEEEEEEEECS-----------SSCCCEEECTTSSEEEEECTT
T ss_pred ceEEC--CCCCEEEEEe----cCCCEEEEEEEcCCCCceEEeeeecCC-----------CccceEEECCCCCEEEEecCC
Confidence 23211 4565433333 134789999997533 47777665321 01111223 235567777655
Q ss_pred CCeEEEE--ECCCCceEEcCCCCCCCCCCCcc
Q 018005 329 WPEILYY--NVARRTWHWLPSCPSLPHKWSCG 358 (362)
Q Consensus 329 ~~~v~~y--d~~~~~w~~~~~~~~~~~~~~~~ 358 (362)
.+.+.+| |.++++++.+...+.......+.
T Consensus 298 ~~~v~v~~~d~~~g~~~~~~~~~~g~~p~~i~ 329 (343)
T 1ri6_A 298 SHHISVYEIVGEQGLLHEKGRYAVGQGPMWVV 329 (343)
T ss_dssp TCEEEEEEEETTTTEEEEEEEEECSSSCCEEE
T ss_pred CCeEEEEEEcCCCceeeEccccccCCCCeeEE
Confidence 6677777 77788888876655544444433
No 46
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=94.81 E-value=2 Score=38.01 Aligned_cols=215 Identities=12% Similarity=0.115 Sum_probs=110.5
Q ss_pred eeeeeeCCCCC--eEeecCCcCCC-----CCCceEEEecCCceEEEecCCCCeEEEEeCCcCc--eeeccCCCCCCccce
Q 018005 77 QYPLYDSTHGT--WRRLSLPYSLL-----LPSAATLLSSSKGLLCFSLPSSSSFLVCNLVTLS--SRTIDFPTYPFDFEL 147 (362)
Q Consensus 77 ~~~~~d~~~~~--w~~~~~~~~~~-----~~~~~~~~~s~~Gll~~~~~~~~~~~v~NP~t~~--w~~lP~~~~~~~~~~ 147 (362)
.+.++|..+++ |.. .++.... ...........+|.+++... .+.++.+|+.|++ |..-.... .....
T Consensus 64 ~v~a~d~~tG~~~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-~g~l~a~d~~tG~~~W~~~~~~~-~~~~p- 139 (376)
T 3q7m_A 64 LVKALNADDGKEIWSV-SLAEKDGWFSKEPALLSGGVTVSGGHVYIGSE-KAQVYALNTSDGTVAWQTKVAGE-ALSRP- 139 (376)
T ss_dssp EEEEEETTTCCEEEEE-ECCC---CCSCCCCCEEEEEEEETTEEEEEET-TSEEEEEETTTCCEEEEEECSSC-CCSCC-
T ss_pred eEEEEEccCCceeeee-cCccccccccccCcccccCceEeCCEEEEEcC-CCEEEEEECCCCCEEEEEeCCCc-eEcCC-
Confidence 57789987664 533 2221100 11112234456777776553 4789999999998 43311111 11111
Q ss_pred EEEEeCCCceEEEEEeeecCCCeEEEEeCCCCc--ccccccCCCCccccccCCCcccEEECCEEEEEecCCcEEEEEEcC
Q 018005 148 LTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQS--WSKFDIDGFPSMILSQSSHQEGVFYKGSLYFTTPEPFSIVRFDLE 225 (362)
Q Consensus 148 ~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~--W~~~~~~~~p~~~~~~~~~~~~v~~~G~ly~~~~~~~~i~~~D~~ 225 (362)
.... . .|++.. ....+..||..+++ |+... ..+. ........++..+|.+|+-... ..+.++|++
T Consensus 140 -~~~~---~-~v~v~~---~~g~l~~~d~~tG~~~W~~~~--~~~~--~~~~~~~~~~~~~~~v~~g~~~-g~l~~~d~~ 206 (376)
T 3q7m_A 140 -VVSD---G-LVLIHT---SNGQLQALNEADGAVKWTVNL--DMPS--LSLRGESAPTTAFGAAVVGGDN-GRVSAVLME 206 (376)
T ss_dssp -EEET---T-EEEEEC---TTSEEEEEETTTCCEEEEEEC--CC-------CCCCCCEEETTEEEECCTT-TEEEEEETT
T ss_pred -EEEC---C-EEEEEc---CCCeEEEEECCCCcEEEEEeC--CCCc--eeecCCCCcEEECCEEEEEcCC-CEEEEEECC
Confidence 1111 1 344322 23478899987765 87654 2221 1111234566778888864433 479999997
Q ss_pred CC--eeecCCCCCcccccCCCCc---------ccccceeecccCCCeEEEEEEeecCCccceEEEEEECCCCC-EEEEec
Q 018005 226 NG--IWETPNDANDHMTMMLPHE---------LTFFRLVNDGEESNKLYLIGGVGRNGISTTMKLWELGCGGN-WIEVER 293 (362)
Q Consensus 226 ~~--~w~~~~~p~~~~~~~~p~~---------~~~~~lv~~~~~~G~L~vv~~~~~~~~~~~i~vw~l~~~~~-W~~v~~ 293 (362)
+. .|+.- .+ .|.. .....++ .+|.||+... ...+..+..+.... |+.-..
T Consensus 207 tG~~~w~~~-~~-------~~~~~~~~~~~~~~~~~p~~----~~~~v~~~~~------~g~l~~~d~~tG~~~w~~~~~ 268 (376)
T 3q7m_A 207 QGQMIWQQR-IS-------QATGSTEIDRLSDVDTTPVV----VNGVVFALAY------NGNLTALDLRSGQIMWKRELG 268 (376)
T ss_dssp TCCEEEEEE-CC-------C-----------CCCCCCEE----ETTEEEEECT------TSCEEEEETTTCCEEEEECCC
T ss_pred CCcEEEEEe-cc-------cCCCCcccccccccCCCcEE----ECCEEEEEec------CcEEEEEECCCCcEEeeccCC
Confidence 54 66642 11 1111 1112222 5777777642 23455554432222 774211
Q ss_pred ccHHHHHHhhhccccCCccEEEEeeCCEEEEEeecCCeEEEEECCCCc--eEE
Q 018005 294 VPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYTWPEILYYNVARRT--WHW 344 (362)
Q Consensus 294 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~v~~yd~~~~~--w~~ 344 (362)
. ....+..++.||+.. ..+.+.++|+++++ |+.
T Consensus 269 ---------------~--~~~~~~~~~~l~~~~-~~g~l~~~d~~tG~~~w~~ 303 (376)
T 3q7m_A 269 ---------------S--VNDFIVDGNRIYLVD-QNDRVMALTIDGGVTLWTQ 303 (376)
T ss_dssp ---------------C--EEEEEEETTEEEEEE-TTCCEEEEETTTCCEEEEE
T ss_pred ---------------C--CCCceEECCEEEEEc-CCCeEEEEECCCCcEEEee
Confidence 0 112234578888875 35689999999885 554
No 47
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=94.78 E-value=1.6 Score=36.79 Aligned_cols=195 Identities=14% Similarity=0.100 Sum_probs=101.3
Q ss_pred EecCCceEEEecCCCCeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCcccccc
Q 018005 106 LSSSKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFD 185 (362)
Q Consensus 106 ~~s~~Gll~~~~~~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~ 185 (362)
....+|-+++.....+.+.++|+. ++...++.+........++++..+ .+++... ....+.+||.. +..+...
T Consensus 26 ~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g---~l~v~~~--~~~~v~~~d~~-g~~~~~~ 98 (300)
T 2qc5_A 26 TSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLG---DIWFTEN--GANKIGKLSKK-GGFTEYP 98 (300)
T ss_dssp EECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTS---CEEEEET--TTTEEEEECTT-SCEEEEE
T ss_pred eECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCC---CEEEEec--CCCeEEEECCC-CCeEEec
Confidence 344566666655445789999998 777665433211222234443322 3444322 23578899887 6665443
Q ss_pred cCCCCccccccCCCcccEEE--CCEEEEEecCCcEEEEEEcCCCeeecCCCCCcccccCCCCc-ccccceeecccCCCeE
Q 018005 186 IDGFPSMILSQSSHQEGVFY--KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHE-LTFFRLVNDGEESNKL 262 (362)
Q Consensus 186 ~~~~p~~~~~~~~~~~~v~~--~G~ly~~~~~~~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~-~~~~~lv~~~~~~G~L 262 (362)
.+. . . .....+.+ +|.+|+.......+..||++ .+..... ++.. .....+... .+|+|
T Consensus 99 ---~~~-~--~-~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~---------~~~~~~~~~~i~~d--~~g~l 159 (300)
T 2qc5_A 99 ---LPQ-P--D-SGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYD---------LPNKGSYPAFITLG--SDNAL 159 (300)
T ss_dssp ---CSS-T--T-CCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEE---------CSSTTCCEEEEEEC--TTSSE
T ss_pred ---CCC-C--C-CCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEcc---------CCCCCCCceeEEEC--CCCCE
Confidence 121 0 0 12233444 58888776655679999998 5554332 2211 112233322 57888
Q ss_pred EEEEEeecCCccceEEEEEECCCCCEEEEecccHHHHHHhhhccccCCccEEEEeeCCEEEEEeecCCeEEEEECCCCce
Q 018005 263 YLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYTWPEILYYNVARRTW 342 (362)
Q Consensus 263 ~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~v~~yd~~~~~w 342 (362)
++... .... |+.++..+....+. ++.. . ....-.++..++.+|+.....+.+..||+ +++.
T Consensus 160 ~v~~~-----~~~~--i~~~~~~g~~~~~~-~~~~-----~-----~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~ 220 (300)
T 2qc5_A 160 WFTEN-----QNNS--IGRITNTGKLEEYP-LPTN-----A-----AAPVGITSGNDGALWFVEIMGNKIGRITT-TGEI 220 (300)
T ss_dssp EEEET-----TTTE--EEEECTTCCEEEEE-CSST-----T-----CCEEEEEECTTSSEEEEETTTTEEEEECT-TCCE
T ss_pred EEEec-----CCCe--EEEECCCCcEEEee-CCCC-----C-----CCcceEEECCCCCEEEEccCCCEEEEEcC-CCcE
Confidence 88753 1233 45556555555432 2110 0 01111122334568887655667999998 5555
Q ss_pred EEc
Q 018005 343 HWL 345 (362)
Q Consensus 343 ~~~ 345 (362)
...
T Consensus 221 ~~~ 223 (300)
T 2qc5_A 221 SEY 223 (300)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
No 48
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=94.61 E-value=1.3 Score=37.73 Aligned_cols=152 Identities=11% Similarity=-0.005 Sum_probs=83.5
Q ss_pred EEEEEeeecCCCeEEEEeCCCCcccccccCCCCccccccCCCccc-EEECCEEEEEecCCcEEEEEEcCCCeee-cCCCC
Q 018005 158 KIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILSQSSHQEG-VFYKGSLYFTTPEPFSIVRFDLENGIWE-TPNDA 235 (362)
Q Consensus 158 kv~~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~~~~-v~~~G~ly~~~~~~~~i~~~D~~~~~w~-~~~~p 235 (362)
.++...+......+.++|..+++=...- .++. .....+ +..++.+|.++.....+.+||+++.+-. .+..+
T Consensus 33 ~Lyvstg~~~~s~v~~iD~~tg~v~~~i--~l~~-----~~fgeGi~~~g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g 105 (266)
T 2iwa_A 33 TLFESTGLYGRSSVRQVALQTGKVENIH--KMDD-----SYFGEGLTLLNEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQ 105 (266)
T ss_dssp EEEEEECSTTTCEEEEEETTTCCEEEEE--ECCT-----TCCEEEEEEETTEEEEEETTCSEEEEEETTTTEEEEEEECC
T ss_pred eEEEECCCCCCCEEEEEECCCCCEEEEE--ecCC-----CcceEEEEEeCCEEEEEEecCCEEEEEECCCCcEEEEEECC
Confidence 6777666545679999999988632221 1221 122223 3446799999988789999999876432 22211
Q ss_pred CcccccCCCCcccccceeecccCCCeEEEEEEeecCCccceEEEEEECCCCCEEEEecccHHHHHHhhhccccCCccEEE
Q 018005 236 NDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYC 315 (362)
Q Consensus 236 ~~~~~~~~p~~~~~~~lv~~~~~~G~L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~ 315 (362)
.|. ...+.. -+++||+..+ .. .++.+|..+ -+.+.+++.... +......+.+..
T Consensus 106 -------~~~---g~glt~---Dg~~l~vs~g------s~--~l~viD~~t-~~v~~~I~Vg~~----~~p~~~~nele~ 159 (266)
T 2iwa_A 106 -------MKD---GWGLAT---DGKILYGSDG------TS--ILYEIDPHT-FKLIKKHNVKYN----GHRVIRLNELEY 159 (266)
T ss_dssp -------SSS---CCEEEE---CSSSEEEECS------SS--EEEEECTTT-CCEEEEEECEET----TEECCCEEEEEE
T ss_pred -------CCC---eEEEEE---CCCEEEEECC------CC--eEEEEECCC-CcEEEEEEECCC----CcccccceeEEE
Confidence 122 234542 2455776532 23 355556443 233333321000 000001122332
Q ss_pred EeeCCEEEEEeecCCeEEEEECCCCceEE
Q 018005 316 FWHQGMICVCCYTWPEILYYNVARRTWHW 344 (362)
Q Consensus 316 ~~~~~~i~~~~~~~~~v~~yd~~~~~w~~ 344 (362)
. ++.+|+.....+.|.+-|+++++-..
T Consensus 160 ~--dg~lyvn~~~~~~V~vID~~tg~V~~ 186 (266)
T 2iwa_A 160 I--NGEVWANIWQTDCIARISAKDGTLLG 186 (266)
T ss_dssp E--TTEEEEEETTSSEEEEEETTTCCEEE
T ss_pred E--CCEEEEecCCCCeEEEEECCCCcEEE
Confidence 2 67899887777899999999985433
No 49
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=94.27 E-value=1.5 Score=37.14 Aligned_cols=138 Identities=15% Similarity=0.052 Sum_probs=79.4
Q ss_pred ceeeeeeCCCCCeE-eecCCcCCCCCCceEEEecCCceEEEecCCCCeEEEEeCCcCce-eeccCCCCCCccceEEEEeC
Q 018005 76 DQYPLYDSTHGTWR-RLSLPYSLLLPSAATLLSSSKGLLCFSLPSSSSFLVCNLVTLSS-RTIDFPTYPFDFELLTLVST 153 (362)
Q Consensus 76 ~~~~~~d~~~~~w~-~~~~~~~~~~~~~~~~~~s~~Gll~~~~~~~~~~~v~NP~t~~w-~~lP~~~~~~~~~~~~~~~~ 153 (362)
+.+..+|+.+++-. +++++. .....-++..++-|+.....++.++++|+.|.+- ..++... .+.|+...
T Consensus 65 S~v~~vD~~Tgkv~~~~~l~~----~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~-----eG~glt~d 135 (262)
T 3nol_A 65 SSIRKVDIESGKTLQQIELGK----RYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDG-----EGWGLTHN 135 (262)
T ss_dssp EEEEEECTTTCCEEEEEECCT----TCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEEEEECSS-----CCCCEEEC
T ss_pred ceEEEEECCCCcEEEEEecCC----ccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEEEECCC-----CceEEecC
Confidence 35677898887643 344431 1112224445677777776678999999999884 3444322 22233332
Q ss_pred CCceEEEEEeeecCCCeEEEEeCCCCccc-ccccCCCCccccccCCCcccEEECCEEEEEecCCcEEEEEEcCCCeee
Q 018005 154 PSGYKIFMLFAKSFPNYAFVYDSTDQSWS-KFDIDGFPSMILSQSSHQEGVFYKGSLYFTTPEPFSIVRFDLENGIWE 230 (362)
Q Consensus 154 ~~~ykv~~~~~~~~~~~~~vy~s~~~~W~-~~~~~~~p~~~~~~~~~~~~v~~~G~ly~~~~~~~~i~~~D~~~~~w~ 230 (362)
+ .++++..+ ...+.++|+++.+=. ..+ +.....+...-....+.+|.+|.-......|.+.|+++++-.
T Consensus 136 g--~~L~~SdG---s~~i~~iDp~T~~v~~~I~---V~~~g~~~~~lNELe~~~G~lyan~w~~~~I~vIDp~tG~V~ 205 (262)
T 3nol_A 136 D--QYLIMSDG---TPVLRFLDPESLTPVRTIT---VTAHGEELPELNELEWVDGEIFANVWQTNKIVRIDPETGKVT 205 (262)
T ss_dssp S--SCEEECCS---SSEEEEECTTTCSEEEEEE---CEETTEECCCEEEEEEETTEEEEEETTSSEEEEECTTTCBEE
T ss_pred C--CEEEEECC---CCeEEEEcCCCCeEEEEEE---eccCCccccccceeEEECCEEEEEEccCCeEEEEECCCCcEE
Confidence 2 24554332 468999999986532 222 111001101111244669999987766778999999987553
No 50
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=94.25 E-value=2 Score=35.67 Aligned_cols=196 Identities=11% Similarity=0.028 Sum_probs=96.0
Q ss_pred EecCCceEEE-ecCCCCeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCccccc
Q 018005 106 LSSSKGLLCF-SLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKF 184 (362)
Q Consensus 106 ~~s~~Gll~~-~~~~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~ 184 (362)
....+|-+++ .....+.+.++|+.++....++.... ....+++++..+ ++++... ...+.+||..++.-...
T Consensus 30 ~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~-~~p~~i~~~~~g---~l~v~~~---~~~i~~~d~~~~~~~~~ 102 (270)
T 1rwi_B 30 AVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGL-YQPQGLAVDGAG---TVYVTDF---NNRVVTLAAGSNNQTVL 102 (270)
T ss_dssp EECTTCCEEEEECSSSCEEEEECC-----EECCCCSC-CSCCCEEECTTC---CEEEEET---TTEEEEECTTCSCCEEC
T ss_pred EECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCc-CCcceeEECCCC---CEEEEcC---CCEEEEEeCCCceEeee
Confidence 3345565666 54445788899998877655443211 112344554432 3554432 45788999877644333
Q ss_pred ccCCCCccccccCCCcccEEE--CCEEEEEecCCcEEEEEEcCCCeeecCCCCCcccccCCCCcccccceeecccCCCeE
Q 018005 185 DIDGFPSMILSQSSHQEGVFY--KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKL 262 (362)
Q Consensus 185 ~~~~~p~~~~~~~~~~~~v~~--~G~ly~~~~~~~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~L 262 (362)
. . .. . ....++.+ +|.+|+.......|..||..+......... ....-..+... .+|+|
T Consensus 103 ~--~-~~--~---~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~---------~~~~p~~i~~~--~~g~l 163 (270)
T 1rwi_B 103 P--F-DG--L---NYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFT---------GLNDPDGVAVD--NSGNV 163 (270)
T ss_dssp C--C-CS--C---SSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCC---------SCCSCCCEEEC--TTCCE
T ss_pred e--c-CC--c---CCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccc---------cCCCceeEEEe--CCCCE
Confidence 2 1 10 0 11223444 588888765555788898766543321101 00011234322 47888
Q ss_pred EEEEEeecCCccceEEEEEECCCCCEEEEecccHHHHHHhhhccccCCccEEEEeeCCEEEEEeecCCeEEEEECCCCce
Q 018005 263 YLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYTWPEILYYNVARRTW 342 (362)
Q Consensus 263 ~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~v~~yd~~~~~w 342 (362)
|+... ....+.+|.. .+.-....... .+ ....-.++..++.+|+.....+.|..||++.+.-
T Consensus 164 ~v~~~-----~~~~i~~~~~--~~~~~~~~~~~-----~~------~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~ 225 (270)
T 1rwi_B 164 YVTDT-----DNNRVVKLEA--ESNNQVVLPFT-----DI------TAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTS 225 (270)
T ss_dssp EEEEG-----GGTEEEEECT--TTCCEEECCCS-----SC------CSEEEEEECTTCCEEEEETTTSCEEEECTTCSCC
T ss_pred EEEEC-----CCCEEEEEec--CCCceEeeccc-----CC------CCceEEEECCCCCEEEEECCCCcEEEEcCCCCcc
Confidence 88764 2345666643 33211111110 00 0111122333457888876667899999987755
Q ss_pred EEc
Q 018005 343 HWL 345 (362)
Q Consensus 343 ~~~ 345 (362)
...
T Consensus 226 ~~~ 228 (270)
T 1rwi_B 226 TVL 228 (270)
T ss_dssp EEC
T ss_pred eee
Confidence 443
No 51
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=94.17 E-value=2.3 Score=36.06 Aligned_cols=139 Identities=10% Similarity=-0.012 Sum_probs=79.5
Q ss_pred CceeeeeeCCCCCeEe-ecCCcCCCCCCceEEEecCCceEEEecCCCCeEEEEeCCcCce-eeccCCCCCCccceEEEEe
Q 018005 75 YDQYPLYDSTHGTWRR-LSLPYSLLLPSAATLLSSSKGLLCFSLPSSSSFLVCNLVTLSS-RTIDFPTYPFDFELLTLVS 152 (362)
Q Consensus 75 ~~~~~~~d~~~~~w~~-~~~~~~~~~~~~~~~~~s~~Gll~~~~~~~~~~~v~NP~t~~w-~~lP~~~~~~~~~~~~~~~ 152 (362)
...+..+|+.+++-.. ++++. .....-++..++.|+.....++.+.++|+.|.+- ..+|.. .+ .+.++..
T Consensus 43 ~s~v~~iD~~tg~v~~~i~l~~----~~fgeGi~~~g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g-~~---~g~glt~ 114 (266)
T 2iwa_A 43 RSSVRQVALQTGKVENIHKMDD----SYFGEGLTLLNEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQ-MK---DGWGLAT 114 (266)
T ss_dssp TCEEEEEETTTCCEEEEEECCT----TCCEEEEEEETTEEEEEETTCSEEEEEETTTTEEEEEEECC-SS---SCCEEEE
T ss_pred CCEEEEEECCCCCEEEEEecCC----CcceEEEEEeCCEEEEEEecCCEEEEEECCCCcEEEEEECC-CC---CeEEEEE
Confidence 4567889998876443 34431 1111223334667888777778999999999874 344432 11 2233433
Q ss_pred CCCceEEEEEeeecCCCeEEEEeCCCCccc-ccccCCCCccccccCCCcccEEECCEEEEEecCCcEEEEEEcCCCee
Q 018005 153 TPSGYKIFMLFAKSFPNYAFVYDSTDQSWS-KFDIDGFPSMILSQSSHQEGVFYKGSLYFTTPEPFSIVRFDLENGIW 229 (362)
Q Consensus 153 ~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~-~~~~~~~p~~~~~~~~~~~~v~~~G~ly~~~~~~~~i~~~D~~~~~w 229 (362)
++. ++++.. ....+.+.|+++.+=. ..+ +.....+........+.+|.+|.-......|.+.|+++.+-
T Consensus 115 Dg~--~l~vs~---gs~~l~viD~~t~~v~~~I~---Vg~~~~p~~~~nele~~dg~lyvn~~~~~~V~vID~~tg~V 184 (266)
T 2iwa_A 115 DGK--ILYGSD---GTSILYEIDPHTFKLIKKHN---VKYNGHRVIRLNELEYINGEVWANIWQTDCIARISAKDGTL 184 (266)
T ss_dssp CSS--SEEEEC---SSSEEEEECTTTCCEEEEEE---CEETTEECCCEEEEEEETTEEEEEETTSSEEEEEETTTCCE
T ss_pred CCC--EEEEEC---CCCeEEEEECCCCcEEEEEE---ECCCCcccccceeEEEECCEEEEecCCCCeEEEEECCCCcE
Confidence 322 455433 2568999999885422 221 10000110011233456899997776667899999998754
No 52
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=94.12 E-value=2.3 Score=35.81 Aligned_cols=222 Identities=14% Similarity=0.104 Sum_probs=113.5
Q ss_pred ceeeeeeCCCCCeEeecCCcCCCCCCceEEEecCCceEEEecCCCCeEEEEeCCcCceeeccCCCCCCccceEEEEeCCC
Q 018005 76 DQYPLYDSTHGTWRRLSLPYSLLLPSAATLLSSSKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPS 155 (362)
Q Consensus 76 ~~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~~s~~Gll~~~~~~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~ 155 (362)
..+..||+. +....+.++... .....+....+|-+++.....+.+.++|+. ++...+..+........++++..+
T Consensus 41 ~~v~~~~~~-~~~~~~~~~~~~--~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g- 115 (300)
T 2qc5_A 41 NKISSLDQS-GRIKEFEVPTPD--AKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNG- 115 (300)
T ss_dssp TEEEEECTT-SCEEEEECSSTT--CCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTT-
T ss_pred CeEEEECCC-CceEEEECCCCC--CcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCC-
Confidence 356678887 666555444211 122223334566666655445789999998 776655432222222344444322
Q ss_pred ceEEEEEeeecCCCeEEEEeCCCCcccccccCCCCccccccCCCcccEEE--CCEEEEEecCCcEEEEEEcCCCeeecCC
Q 018005 156 GYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILSQSSHQEGVFY--KGSLYFTTPEPFSIVRFDLENGIWETPN 233 (362)
Q Consensus 156 ~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~~~~v~~--~G~ly~~~~~~~~i~~~D~~~~~w~~~~ 233 (362)
++++... ....+..|+.. +...... .+. .......+.+ +|.+|+.......+..||+ +.++..+.
T Consensus 116 --~l~v~~~--~~~~i~~~~~~-g~~~~~~---~~~----~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~ 182 (300)
T 2qc5_A 116 --DIWFTQL--NGDRIGKLTAD-GTIYEYD---LPN----KGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEEYP 182 (300)
T ss_dssp --CEEEEET--TTTEEEEECTT-SCEEEEE---CSS----TTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEE
T ss_pred --CEEEEcc--CCCeEEEECCC-CCEEEcc---CCC----CCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEEee
Confidence 3444322 23478888886 5544332 111 0012233444 5888877665567999999 55555433
Q ss_pred CCCcccccCCCCccc-ccceeecccCCCeEEEEEEeecCCccceEEEEEECCCCCEEEEecccHHHHHHhhhccccCCcc
Q 018005 234 DANDHMTMMLPHELT-FFRLVNDGEESNKLYLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDH 312 (362)
Q Consensus 234 ~p~~~~~~~~p~~~~-~~~lv~~~~~~G~L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~ 312 (362)
.|.... -..+... .+|.|++... ....+.++ +..+...... ++.. . ....
T Consensus 183 ---------~~~~~~~~~~i~~d--~~g~l~v~~~-----~~~~i~~~--~~~g~~~~~~-~~~~-----~-----~~~~ 233 (300)
T 2qc5_A 183 ---------LPTNAAAPVGITSG--NDGALWFVEI-----MGNKIGRI--TTTGEISEYD-IPTP-----N-----ARPH 233 (300)
T ss_dssp ---------CSSTTCCEEEEEEC--TTSSEEEEET-----TTTEEEEE--CTTCCEEEEE-CSST-----T-----CCEE
T ss_pred ---------CCCCCCCcceEEEC--CCCCEEEEcc-----CCCEEEEE--cCCCcEEEEE-CCCC-----C-----CCce
Confidence 222111 1233322 4788988764 12344444 5545554432 2200 0 0111
Q ss_pred EEEEeeCCEEEEEeecCCeEEEEECCCCceEEc
Q 018005 313 VYCFWHQGMICVCCYTWPEILYYNVARRTWHWL 345 (362)
Q Consensus 313 ~~~~~~~~~i~~~~~~~~~v~~yd~~~~~w~~~ 345 (362)
-.++..++.||+.....+.|..||+ +++....
T Consensus 234 ~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~ 265 (300)
T 2qc5_A 234 AITAGKNSEIWFTEWGANQIGRITN-DNTIQEY 265 (300)
T ss_dssp EEEECSTTCEEEEETTTTEEEEECT-TSCEEEE
T ss_pred EEEECCCCCEEEeccCCCeEEEECC-CCcEEEE
Confidence 1223334568887765678999998 4555543
No 53
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=94.09 E-value=2.6 Score=36.40 Aligned_cols=226 Identities=10% Similarity=0.033 Sum_probs=110.1
Q ss_pred eeeeeeCCCCCeEe-ecCCcCCCCCCceEEEecCCceEEEecCCCCeEEEEeCCcCcee-eccCCCCC-------Cccce
Q 018005 77 QYPLYDSTHGTWRR-LSLPYSLLLPSAATLLSSSKGLLCFSLPSSSSFLVCNLVTLSSR-TIDFPTYP-------FDFEL 147 (362)
Q Consensus 77 ~~~~~d~~~~~w~~-~~~~~~~~~~~~~~~~~s~~Gll~~~~~~~~~~~v~NP~t~~w~-~lP~~~~~-------~~~~~ 147 (362)
.+..+|+..++... ++.+ .......+...++.+++.....+.+.++|+.+++.. .++..... .....
T Consensus 70 ~v~~~d~~~~~~~~~~~~~----~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (353)
T 3vgz_A 70 VVYRLDPVTLEVTQAIHND----LKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRE 145 (353)
T ss_dssp EEEEECTTTCCEEEEEEES----SCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEE
T ss_pred cEEEEcCCCCeEEEEEecC----CCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCce
Confidence 56778887665432 2222 111222334444556666555678999999998853 33321111 11233
Q ss_pred EEEEeCCCceEEEEEeeecCCCeEEEEeCCCCcccccccCCCCccccccCCCcccEEE-CCE-EEEEecCCcEEEEEEcC
Q 018005 148 LTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILSQSSHQEGVFY-KGS-LYFTTPEPFSIVRFDLE 225 (362)
Q Consensus 148 ~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~~~~v~~-~G~-ly~~~~~~~~i~~~D~~ 225 (362)
+++.+.+. .+++... .....+.+||..+++=... ++. . .......++. +|. +|.... ...+.++|+.
T Consensus 146 ~~~s~dg~--~l~~~~~-~~~~~i~~~d~~~~~~~~~----~~~--~-~~~~~~~~~s~dg~~l~~~~~-~~~i~~~d~~ 214 (353)
T 3vgz_A 146 LVADDATN--TVYISGI-GKESVIWVVDGGNIKLKTA----IQN--T-GKMSTGLALDSEGKRLYTTNA-DGELITIDTA 214 (353)
T ss_dssp EEEETTTT--EEEEEEE-SSSCEEEEEETTTTEEEEE----ECC--C-CTTCCCCEEETTTTEEEEECT-TSEEEEEETT
T ss_pred EEECCCCC--EEEEEec-CCCceEEEEcCCCCceEEE----ecC--C-CCccceEEECCCCCEEEEEcC-CCeEEEEECC
Confidence 45554332 3444332 2345799999876542211 110 0 0011122222 554 554443 4578899998
Q ss_pred CCeeec-CCCCCcccccCCCCcccccceeecccCCCe-EEEEEEeecCCccceEEEEEECCCCCEEEEecccHHHHHHhh
Q 018005 226 NGIWET-PNDANDHMTMMLPHELTFFRLVNDGEESNK-LYLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFM 303 (362)
Q Consensus 226 ~~~w~~-~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~-L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~~p~~~~~~~~ 303 (362)
+.+-.. +..+. .........+... -+|+ |++... ....+.+|+++ .++-......+
T Consensus 215 ~~~~~~~~~~~~------~~~~~~~~~~~~s--~dg~~l~~~~~-----~~~~v~~~d~~-~~~~~~~~~~~-------- 272 (353)
T 3vgz_A 215 DNKILSRKKLLD------DGKEHFFINISLD--TARQRAFITDS-----KAAEVLVVDTR-NGNILAKVAAP-------- 272 (353)
T ss_dssp TTEEEEEEECCC------SSSCCCEEEEEEE--TTTTEEEEEES-----SSSEEEEEETT-TCCEEEEEECS--------
T ss_pred CCeEEEEEEcCC------CCCCcccceEEEC--CCCCEEEEEeC-----CCCEEEEEECC-CCcEEEEEEcC--------
Confidence 775432 22110 0001111112211 3555 555542 34678888763 33322211121
Q ss_pred hccccCCccEEEEeeCCEEEEEeecCCeEEEEECCCCceEE
Q 018005 304 SVCYHNYDHVYCFWHQGMICVCCYTWPEILYYNVARRTWHW 344 (362)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~v~~yd~~~~~w~~ 344 (362)
....+....+++.+|+.....+.+.+||+++++...
T Consensus 273 -----~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~ 308 (353)
T 3vgz_A 273 -----ESLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVK 308 (353)
T ss_dssp -----SCCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEE
T ss_pred -----CCceEEECCCCCEEEEEECCCCeEEEEECCCCeEEE
Confidence 111222223456788877667789999999876554
No 54
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=93.76 E-value=1.9 Score=36.60 Aligned_cols=137 Identities=9% Similarity=-0.165 Sum_probs=78.2
Q ss_pred eeeeeeCCCCCeEe-ecCCcCCCCCCceEEEecCCceEEEecCCCCeEEEEeCCcCce-eeccCCCCCCccceEEEEeCC
Q 018005 77 QYPLYDSTHGTWRR-LSLPYSLLLPSAATLLSSSKGLLCFSLPSSSSFLVCNLVTLSS-RTIDFPTYPFDFELLTLVSTP 154 (362)
Q Consensus 77 ~~~~~d~~~~~w~~-~~~~~~~~~~~~~~~~~s~~Gll~~~~~~~~~~~v~NP~t~~w-~~lP~~~~~~~~~~~~~~~~~ 154 (362)
.+..+|+.+++-.. + ++. .....-++..++-|+.....++.++++|+.|.+- ..++..+. ..+++.+ +
T Consensus 76 ~v~~iD~~Tgkv~~~~-l~~----~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~~e---GwGLt~D--g 145 (268)
T 3nok_A 76 TLRQLSLESAQPVWME-RLG----NIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRERTTRYSGE---GWGLCYW--N 145 (268)
T ss_dssp EEEECCSSCSSCSEEE-ECT----TCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEEEEECSSC---CCCEEEE--T
T ss_pred EEEEEECCCCcEEeEE-CCC----CcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEEEEeCCCc---eeEEecC--C
Confidence 46778887765322 3 331 1111224455667777766678999999999884 34443221 1233332 2
Q ss_pred CceEEEEEeeecCCCeEEEEeCCCCcccccccCCCCccccccCCCcccEEECCEEEEEecCCcEEEEEEcCCCeee
Q 018005 155 SGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILSQSSHQEGVFYKGSLYFTTPEPFSIVRFDLENGIWE 230 (362)
Q Consensus 155 ~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~~~~v~~~G~ly~~~~~~~~i~~~D~~~~~w~ 230 (362)
.++++.. ....+.++|+++.+=...- .+.....+........+.+|.+|.-......|.+.|+++++-.
T Consensus 146 --~~L~vSd---Gs~~l~~iDp~T~~v~~~I--~V~~~g~~v~~lNeLe~~dG~lyanvw~s~~I~vIDp~TG~V~ 214 (268)
T 3nok_A 146 --GKLVRSD---GGTMLTFHEPDGFALVGAV--QVKLRGQPVELINELECANGVIYANIWHSSDVLEIDPATGTVV 214 (268)
T ss_dssp --TEEEEEC---SSSEEEEECTTTCCEEEEE--ECEETTEECCCEEEEEEETTEEEEEETTCSEEEEECTTTCBEE
T ss_pred --CEEEEEC---CCCEEEEEcCCCCeEEEEE--EeCCCCcccccccccEEeCCEEEEEECCCCeEEEEeCCCCcEE
Confidence 2555543 2568999999986532211 1111011111112334669999977766778999999987553
No 55
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=93.20 E-value=2 Score=37.78 Aligned_cols=144 Identities=10% Similarity=0.035 Sum_probs=65.0
Q ss_pred ecCCCCeEEEEeCCcCceeeccCCCC-CCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCc-ccccccCCCCccc
Q 018005 116 SLPSSSSFLVCNLVTLSSRTIDFPTY-PFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQS-WSKFDIDGFPSMI 193 (362)
Q Consensus 116 ~~~~~~~~~v~NP~t~~w~~lP~~~~-~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~-W~~~~~~~~p~~~ 193 (362)
.+..++.+.+||..++.+..+..... ......+.+.+.+ +.++.++ ....+.+||..++. |.... .+..
T Consensus 28 ~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~---~~l~s~s--~d~~v~vwd~~~~~~~~~~~--~~~~-- 98 (377)
T 3dwl_C 28 TTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKS---NRIVTCS--QDRNAYVYEKRPDGTWKQTL--VLLR-- 98 (377)
T ss_dssp CCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTT---CCEEEEE--TTSSEEEC------CCCCEE--ECCC--
T ss_pred EecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCC---CEEEEEe--CCCeEEEEEcCCCCceeeee--Eecc--
Confidence 33345778899999987665544432 2223344454332 2333333 34578999998876 54433 1111
Q ss_pred cccCCCcccEEE--CCEEEEEecCCcEEEEEEcCCCe-eecCCCCCcccccCCCCcccccceeecccCCCeEEEEEEeec
Q 018005 194 LSQSSHQEGVFY--KGSLYFTTPEPFSIVRFDLENGI-WETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGR 270 (362)
Q Consensus 194 ~~~~~~~~~v~~--~G~ly~~~~~~~~i~~~D~~~~~-w~~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~L~vv~~~~~ 270 (362)
.......+.+ +|...+.+.....+..||+.+.+ |.....-. .+....-..+... -+|++++.+..
T Consensus 99 --~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~------~~h~~~v~~~~~~--~~~~~l~~~~~-- 166 (377)
T 3dwl_C 99 --LNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLK------RPLRSTILSLDWH--PNNVLLAAGCA-- 166 (377)
T ss_dssp --CSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEEC------SSCCSCEEEEEEC--TTSSEEEEEES--
T ss_pred --cCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEee------cccCCCeEEEEEc--CCCCEEEEEeC--
Confidence 0011112222 45555555554578888887654 32211000 1111111222211 46777777652
Q ss_pred CCccceEEEEEEC
Q 018005 271 NGISTTMKLWELG 283 (362)
Q Consensus 271 ~~~~~~i~vw~l~ 283 (362)
...+.+|+++
T Consensus 167 ---d~~i~iwd~~ 176 (377)
T 3dwl_C 167 ---DRKAYVLSAY 176 (377)
T ss_dssp ---SSCEEEEEEC
T ss_pred ---CCEEEEEEEE
Confidence 3679999985
No 56
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=93.18 E-value=3.7 Score=35.18 Aligned_cols=208 Identities=13% Similarity=0.096 Sum_probs=98.1
Q ss_pred cCCc-eEEEecCCCCeEEEEeCC--cCceeeccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCc-ccc
Q 018005 108 SSKG-LLCFSLPSSSSFLVCNLV--TLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQS-WSK 183 (362)
Q Consensus 108 s~~G-ll~~~~~~~~~~~v~NP~--t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~-W~~ 183 (362)
+-+| .+++.....+.+.+|+.. +++...+...+.......+++.+.+. .+++... ....+.+||..++. ...
T Consensus 46 spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~--~l~~~~~--~~~~i~~~d~~~~~~~~~ 121 (343)
T 1ri6_A 46 SPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQ--FVFVGSY--NAGNVSVTRLEDGLPVGV 121 (343)
T ss_dssp CTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSS--EEEEEET--TTTEEEEEEEETTEEEEE
T ss_pred CCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCCCCcEEEEcCCCC--EEEEEec--CCCeEEEEECCCCccccc
Confidence 3344 455554434778887766 77765543222111223444543322 2333332 23568888874321 122
Q ss_pred cccCCCCccccccCCCcccEEE--CC-EEEEEecCCcEEEEEEcCC-CeeecCC---CCCcccccCCCCcccccceeecc
Q 018005 184 FDIDGFPSMILSQSSHQEGVFY--KG-SLYFTTPEPFSIVRFDLEN-GIWETPN---DANDHMTMMLPHELTFFRLVNDG 256 (362)
Q Consensus 184 ~~~~~~p~~~~~~~~~~~~v~~--~G-~ly~~~~~~~~i~~~D~~~-~~w~~~~---~p~~~~~~~~p~~~~~~~lv~~~ 256 (362)
.. ..+. ......+.+ +| .+|........+..||+.+ .+...+. .. .+.+.....+...
T Consensus 122 ~~--~~~~-----~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~- 186 (343)
T 1ri6_A 122 VD--VVEG-----LDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVT-------TVEGAGPRHMVFH- 186 (343)
T ss_dssp EE--EECC-----CTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEE-------CSTTCCEEEEEEC-
T ss_pred cc--cccC-----CCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccc-------cCCCCCcceEEEC-
Confidence 21 1111 011122222 45 4665553445799999987 5554211 01 1111111122212
Q ss_pred cCCCe-EEEEEEeecCCccceEEEEEECCC-CCEEEE---ecccHHHHHHhhhccccCCccE--EEEe-eCCEEEEEeec
Q 018005 257 EESNK-LYLIGGVGRNGISTTMKLWELGCG-GNWIEV---ERVPEMMCRKFMSVCYHNYDHV--YCFW-HQGMICVCCYT 328 (362)
Q Consensus 257 ~~~G~-L~vv~~~~~~~~~~~i~vw~l~~~-~~W~~v---~~~p~~~~~~~~~~~~~~~~~~--~~~~-~~~~i~~~~~~ 328 (362)
-+|+ |++.+. ....+.+|.++.. +.+... ..++.. + ...... .++. .+..+++....
T Consensus 187 -pdg~~l~~~~~-----~~~~i~~~~~~~~~g~~~~~~~~~~~~~~----~-----~~~~~~~~i~~s~dg~~l~v~~~~ 251 (343)
T 1ri6_A 187 -PNEQYAYCVNE-----LNSSVDVWELKDPHGNIECVQTLDMMPEN----F-----SDTRWAADIHITPDGRHLYACDRT 251 (343)
T ss_dssp -TTSSEEEEEET-----TTTEEEEEESSCTTSCCEEEEEEECSCTT----C-----CSCCCEEEEEECTTSSEEEEEETT
T ss_pred -CCCCEEEEEeC-----CCCEEEEEEecCCCCcEEEEeeccccCcc----c-----cccCCccceEECCCCCEEEEEecC
Confidence 4676 555542 3478999998643 334333 333311 0 000111 2222 34577776656
Q ss_pred CCeEEEEECC--CCceEEcCCCC
Q 018005 329 WPEILYYNVA--RRTWHWLPSCP 349 (362)
Q Consensus 329 ~~~v~~yd~~--~~~w~~~~~~~ 349 (362)
.+.+.+||++ +++.+.+...+
T Consensus 252 ~~~i~v~d~~~~~~~~~~~~~~~ 274 (343)
T 1ri6_A 252 ASLITVFSVSEDGSVLSKEGFQP 274 (343)
T ss_dssp TTEEEEEEECTTSCCEEEEEEEE
T ss_pred CCEEEEEEEcCCCCceEEeeeec
Confidence 6789999998 55666654433
No 57
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=92.75 E-value=4.2 Score=34.66 Aligned_cols=189 Identities=11% Similarity=0.067 Sum_probs=91.5
Q ss_pred cCCc-eEEEecCCCCeEEEEeCCcCceeeccCCCC-CCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCcccccc
Q 018005 108 SSKG-LLCFSLPSSSSFLVCNLVTLSSRTIDFPTY-PFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFD 185 (362)
Q Consensus 108 s~~G-ll~~~~~~~~~~~v~NP~t~~w~~lP~~~~-~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~ 185 (362)
+.+| +++.. ..++.+.+||..+++......... ......+.+.+.+ +.++.++ ....+.+||..++.-...-
T Consensus 106 ~~~~~~l~~~-~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~l~~~~--~dg~v~~~d~~~~~~~~~~ 179 (337)
T 1gxr_A 106 LPDGCTLIVG-GEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDS---KVCFSCC--SDGNIAVWDLHNQTLVRQF 179 (337)
T ss_dssp CTTSSEEEEE-ESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTS---SEEEEEE--TTSCEEEEETTTTEEEEEE
T ss_pred cCCCCEEEEE-cCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCC---CEEEEEe--CCCcEEEEeCCCCceeeee
Confidence 3345 33333 345789999999887433322211 1122233443322 2333333 2357889998876432211
Q ss_pred cCCCCccccccCCCcccEEE--CCEEEEEecCCcEEEEEEcCCCeeecCCCCCcccccCCCCcccccceeecccCCCeEE
Q 018005 186 IDGFPSMILSQSSHQEGVFY--KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLY 263 (362)
Q Consensus 186 ~~~~p~~~~~~~~~~~~v~~--~G~ly~~~~~~~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~L~ 263 (362)
.. .......+.+ +|...+.+.....+..||+.+.+-.... . .+.......+. -+|+++
T Consensus 180 ----~~----~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~-~-------~~~~v~~~~~s----~~~~~l 239 (337)
T 1gxr_A 180 ----QG----HTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQH-D-------FTSQIFSLGYC----PTGEWL 239 (337)
T ss_dssp ----CC----CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE-E-------CSSCEEEEEEC----TTSSEE
T ss_pred ----ec----ccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeee-c-------CCCceEEEEEC----CCCCEE
Confidence 10 0011122333 5666666665568999999876443211 1 22222222221 467777
Q ss_pred EEEEeecCCccceEEEEEECCCCCEEEEecccHHHHHHhhhccccCCccEEEE--eeCCEEEEEeecCCeEEEEECCCCc
Q 018005 264 LIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCF--WHQGMICVCCYTWPEILYYNVARRT 341 (362)
Q Consensus 264 vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~v~~yd~~~~~ 341 (362)
+++. ....+.+|.++...... ... ....+..+ ..++..++.....+.+.+||+++++
T Consensus 240 ~~~~-----~~~~i~~~~~~~~~~~~-~~~---------------~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~ 298 (337)
T 1gxr_A 240 AVGM-----ESSNVEVLHVNKPDKYQ-LHL---------------HESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGA 298 (337)
T ss_dssp EEEE-----TTSCEEEEETTSSCEEE-ECC---------------CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC
T ss_pred EEEc-----CCCcEEEEECCCCCeEE-EcC---------------CccceeEEEECCCCCEEEEecCCCcEEEEECCCCe
Confidence 7765 23678999885433221 110 11112222 2233334444456678889988875
Q ss_pred eE
Q 018005 342 WH 343 (362)
Q Consensus 342 w~ 343 (362)
-.
T Consensus 299 ~~ 300 (337)
T 1gxr_A 299 SI 300 (337)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 58
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=92.70 E-value=4.4 Score=34.80 Aligned_cols=113 Identities=12% Similarity=0.126 Sum_probs=56.4
Q ss_pred CCceEEEecCCCCeEEEEeCCcCceeeccCC-CCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCcccccccC
Q 018005 109 SKGLLCFSLPSSSSFLVCNLVTLSSRTIDFP-TYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDID 187 (362)
Q Consensus 109 ~~Gll~~~~~~~~~~~v~NP~t~~w~~lP~~-~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~~~ 187 (362)
.+|-.++.+..++.+.+||..+++...+..+ ........+++.+.... .+++.++ ....+.+||..++.|....
T Consensus 23 ~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~-~~l~s~s--~D~~v~iWd~~~~~~~~~~-- 97 (316)
T 3bg1_A 23 YYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYG-NILASCS--YDRKVIIWREENGTWEKSH-- 97 (316)
T ss_dssp GGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGS-SCEEEEE--TTSCEEEECCSSSCCCEEE--
T ss_pred CCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCC-CEEEEEE--CCCEEEEEECCCCcceEEE--
Confidence 3443333343467889999887754322211 11112223444321111 2333333 3467999999888775543
Q ss_pred CCCccccccCCCcccEEE--C--CEEEEEecCCcEEEEEEcCCC-eee
Q 018005 188 GFPSMILSQSSHQEGVFY--K--GSLYFTTPEPFSIVRFDLENG-IWE 230 (362)
Q Consensus 188 ~~p~~~~~~~~~~~~v~~--~--G~ly~~~~~~~~i~~~D~~~~-~w~ 230 (362)
.+.. ....-..+.+ + |.+...+.....+..+|..++ .|.
T Consensus 98 ~~~~----h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~ 141 (316)
T 3bg1_A 98 EHAG----HDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWE 141 (316)
T ss_dssp EECC----CSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEE
T ss_pred EccC----CCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcc
Confidence 1111 0011223333 2 555555555557888998765 454
No 59
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=92.64 E-value=5.6 Score=35.86 Aligned_cols=214 Identities=11% Similarity=0.100 Sum_probs=103.1
Q ss_pred eeeeeeCCCCCeEeecCCcCCCCCCceEEEecCCceEEEecCCCCeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCc
Q 018005 77 QYPLYDSTHGTWRRLSLPYSLLLPSAATLLSSSKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSG 156 (362)
Q Consensus 77 ~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~~s~~Gll~~~~~~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ 156 (362)
.+.++|...+.....-.. .......++. +|-+++.+..++.+.+||..+++....-.. .......+.+ .+ .
T Consensus 154 ~i~iwd~~~~~~~~~~~~----h~~~v~~l~~-~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~-h~~~v~~l~~--~~-~ 224 (435)
T 1p22_A 154 TIKIWDKNTLECKRILTG----HTGSVLCLQY-DERVIITGSSDSTVRVWDVNTGEMLNTLIH-HCEAVLHLRF--NN-G 224 (435)
T ss_dssp CEEEEESSSCCEEEEECC----CSSCEEEEEC-CSSEEEEEETTSCEEEEESSSCCEEEEECC-CCSCEEEEEC--CT-T
T ss_pred eEEEEeCCCCeEEEEEcC----CCCcEEEEEE-CCCEEEEEcCCCeEEEEECCCCcEEEEEcC-CCCcEEEEEE--cC-C
Confidence 355666655443222101 1123334444 443333343468899999999875432211 1111122222 22 2
Q ss_pred eEEEEEeeecCCCeEEEEeCCCCcccccccCCCCccccccCCCcccEEECCEEEEEecCCcEEEEEEcCCCeeecCCCCC
Q 018005 157 YKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILSQSSHQEGVFYKGSLYFTTPEPFSIVRFDLENGIWETPNDAN 236 (362)
Q Consensus 157 ykv~~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~~~~v~~~G~ly~~~~~~~~i~~~D~~~~~w~~~~~p~ 236 (362)
.++.++ ....+.+||..++.-..... .... .......+..+|...+.++....+..||+.+.+-......
T Consensus 225 --~l~s~s--~dg~i~vwd~~~~~~~~~~~-~~~~----~~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~- 294 (435)
T 1p22_A 225 --MMVTCS--KDRSIAVWDMASPTDITLRR-VLVG----HRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNG- 294 (435)
T ss_dssp --EEEEEE--TTSCEEEEECSSSSCCEEEE-EECC----CSSCEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEEC-
T ss_pred --EEEEee--CCCcEEEEeCCCCCCceeee-EecC----CCCcEEEEEeCCCEEEEEeCCCeEEEEECCcCcEEEEEcC-
Confidence 333333 34578899987654221100 0000 1112234445776666666666899999987643221101
Q ss_pred cccccCCCCcccccceeecccCCCeEEEEEEeecCCccceEEEEEECCCCCEEEEecccHHHHHHhhhccccCCccEEEE
Q 018005 237 DHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCF 316 (362)
Q Consensus 237 ~~~~~~~p~~~~~~~lv~~~~~~G~L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~ 316 (362)
... ....+ . .+|.++++++ ....+.+|++... . .+..+. .+...+.++
T Consensus 295 ------~~~---~v~~~-~--~~~~~l~~g~-----~dg~i~iwd~~~~-~--~~~~~~------------~h~~~v~~~ 342 (435)
T 1p22_A 295 ------HKR---GIACL-Q--YRDRLVVSGS-----SDNTIRLWDIECG-A--CLRVLE------------GHEELVRCI 342 (435)
T ss_dssp ------CSS---CEEEE-E--EETTEEEEEE-----TTSCEEEEETTTC-C--EEEEEC------------CCSSCEEEE
T ss_pred ------CCC---cEEEE-E--eCCCEEEEEe-----CCCeEEEEECCCC-C--EEEEEe------------CCcCcEEEE
Confidence 111 11222 2 5677777765 2368999988532 2 222221 111233444
Q ss_pred eeCCEEEEEeecCCeEEEEECCCCc
Q 018005 317 WHQGMICVCCYTWPEILYYNVARRT 341 (362)
Q Consensus 317 ~~~~~i~~~~~~~~~v~~yd~~~~~ 341 (362)
.-++..++.+...+.|.+||+++.+
T Consensus 343 ~~~~~~l~sg~~dg~i~vwd~~~~~ 367 (435)
T 1p22_A 343 RFDNKRIVSGAYDGKIKVWDLVAAL 367 (435)
T ss_dssp ECCSSEEEEEETTSCEEEEEHHHHT
T ss_pred EecCCEEEEEeCCCcEEEEECCCCC
Confidence 3344345555566789999987653
No 60
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=92.64 E-value=4.7 Score=35.00 Aligned_cols=138 Identities=7% Similarity=0.026 Sum_probs=69.7
Q ss_pred CCCeEEEEeCCcCceeeccCCC-CCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCcccccccCCCCccccccC
Q 018005 119 SSSSFLVCNLVTLSSRTIDFPT-YPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILSQS 197 (362)
Q Consensus 119 ~~~~~~v~NP~t~~w~~lP~~~-~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~ 197 (362)
.++.+.+||..++++..+.... .......+.+.+.+ +.++.++ ....+.+||..++.+.... .... ..
T Consensus 28 ~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~---~~l~~~~--~dg~i~vwd~~~~~~~~~~--~~~~----~~ 96 (372)
T 1k8k_C 28 NNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDS---NRIVTCG--TDRNAYVWTLKGRTWKPTL--VILR----IN 96 (372)
T ss_dssp SSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTT---TEEEEEE--TTSCEEEEEEETTEEEEEE--ECCC----CS
T ss_pred CCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCC---CEEEEEc--CCCeEEEEECCCCeeeeeE--Eeec----CC
Confidence 4678999999998644333221 12223344554432 2333333 3457899999887765433 1111 00
Q ss_pred CCcccEEE--CCEEEEEecCCcEEEEEEcCCCe-eec---CCCCCcccccCCCCcccccceeecccCCCeEEEEEEeecC
Q 018005 198 SHQEGVFY--KGSLYFTTPEPFSIVRFDLENGI-WET---PNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRN 271 (362)
Q Consensus 198 ~~~~~v~~--~G~ly~~~~~~~~i~~~D~~~~~-w~~---~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~L~vv~~~~~~ 271 (362)
.....+.+ +|...+.+.....+..||+.+.. +.. +..+ ..... ..+... -+|++++++.
T Consensus 97 ~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~-------~~~~i--~~~~~~--~~~~~l~~~~---- 161 (372)
T 1k8k_C 97 RAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKP-------IRSTV--LSLDWH--PNSVLLAAGS---- 161 (372)
T ss_dssp SCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTT-------CCSCE--EEEEEC--TTSSEEEEEE----
T ss_pred CceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecc-------cCCCe--eEEEEc--CCCCEEEEEc----
Confidence 11122222 46655555555568888887543 221 1111 11111 122211 4677777665
Q ss_pred CccceEEEEEEC
Q 018005 272 GISTTMKLWELG 283 (362)
Q Consensus 272 ~~~~~i~vw~l~ 283 (362)
....+.+|++.
T Consensus 162 -~dg~i~~~d~~ 172 (372)
T 1k8k_C 162 -CDFKCRIFSAY 172 (372)
T ss_dssp -TTSCEEEEECC
T ss_pred -CCCCEEEEEcc
Confidence 23678999863
No 61
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=92.63 E-value=5.5 Score=35.76 Aligned_cols=148 Identities=11% Similarity=0.077 Sum_probs=78.6
Q ss_pred cCCceEEEecCCCCeEEEEeCCcCceeeccCCCC-CCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCccccccc
Q 018005 108 SSKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTY-PFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDI 186 (362)
Q Consensus 108 s~~Gll~~~~~~~~~~~v~NP~t~~w~~lP~~~~-~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~~ 186 (362)
|.+++|-+.. ++.+++||..|++...+-.... .....++++.+.+ +.++.++ ....+.+||.+++.=...-
T Consensus 114 S~~n~lAvgl--d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg---~~lasgs--~Dg~v~iWd~~~~~~~~~~- 185 (420)
T 4gga_A 114 SSGNVLAVAL--DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEG---NYLAVGT--SSAEVQLWDVQQQKRLRNM- 185 (420)
T ss_dssp CTTSEEEEEE--TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTS---SEEEEEE--TTSCEEEEETTTTEEEEEE-
T ss_pred CCCCEEEEEe--CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCC---CEEEEEE--CCCeEEEEEcCCCcEEEEE-
Confidence 4456655443 4789999999999766543322 2233455565433 3344444 3468999999876421111
Q ss_pred CCCCccccccCCCcccEEECCEEEEEecCCcEEEEEEcCCCeeecCCCCCcccccCCCCcccccceeecccCCCeEEEEE
Q 018005 187 DGFPSMILSQSSHQEGVFYKGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIG 266 (362)
Q Consensus 187 ~~~p~~~~~~~~~~~~v~~~G~ly~~~~~~~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~L~vv~ 266 (362)
.. .......+..++.+...+.....+..+|............. ......... . . .+|+..+.+
T Consensus 186 ---~~----h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~------h~~~~~~~~-~-~--~~g~~l~s~ 248 (420)
T 4gga_A 186 ---TS----HSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSG------HSQEVCGLR-W-A--PDGRHLASG 248 (420)
T ss_dssp ---CC----CSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEEC------CSSCEEEEE-E-C--TTSSEEEEE
T ss_pred ---eC----CCCceEEEeeCCCEEEEEeCCCceeEeeecccceeeEEecc------cccceeeee-e-c--CCCCeeeee
Confidence 11 01122345557776666666667888887654322211000 111111111 1 1 567766666
Q ss_pred EeecCCccceEEEEEECCC
Q 018005 267 GVGRNGISTTMKLWELGCG 285 (362)
Q Consensus 267 ~~~~~~~~~~i~vw~l~~~ 285 (362)
+ ....+.+|.....
T Consensus 249 ~-----~D~~v~i~~~~~~ 262 (420)
T 4gga_A 249 G-----NDNLVNVWPSAPG 262 (420)
T ss_dssp E-----TTSCEEEEESSCC
T ss_pred e-----ccccceEEeeccc
Confidence 5 2367889987543
No 62
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=92.34 E-value=4.2 Score=33.66 Aligned_cols=190 Identities=11% Similarity=0.056 Sum_probs=97.9
Q ss_pred cCCceEEEecCCCCeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCcccccccC
Q 018005 108 SSKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDID 187 (362)
Q Consensus 108 s~~Gll~~~~~~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~~~ 187 (362)
..+|-+++... .+.+.++|+.++....++.... .....++++..+ ++++... ....+.+|+.++.......
T Consensus 75 ~~~g~l~v~~~-~~~i~~~d~~~~~~~~~~~~~~-~~p~~i~~~~~g---~l~v~~~--~~~~i~~~~~~~~~~~~~~-- 145 (270)
T 1rwi_B 75 DGAGTVYVTDF-NNRVVTLAAGSNNQTVLPFDGL-NYPEGLAVDTQG---AVYVADR--GNNRVVKLAAGSKTQTVLP-- 145 (270)
T ss_dssp CTTCCEEEEET-TTEEEEECTTCSCCEECCCCSC-SSEEEEEECTTC---CEEEEEG--GGTEEEEECTTCCSCEECC--
T ss_pred CCCCCEEEEcC-CCEEEEEeCCCceEeeeecCCc-CCCcceEECCCC---CEEEEEC--CCCEEEEEECCCceeEeec--
Confidence 34565655554 5789999998877655543211 112244444332 3554432 2346788877665443222
Q ss_pred CCCccccccCCCcccEEE--CCEEEEEecCCcEEEEEEcCCCeeecCCCCCcccccCCCCcccccceeecccCCCeEEEE
Q 018005 188 GFPSMILSQSSHQEGVFY--KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLI 265 (362)
Q Consensus 188 ~~p~~~~~~~~~~~~v~~--~G~ly~~~~~~~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~L~vv 265 (362)
. . .. ....++.+ +|.+|+.......|..||+.+.......... + .....+... -+|.||+.
T Consensus 146 ~--~-~~---~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~------~---~~p~~i~~d--~~g~l~v~ 208 (270)
T 1rwi_B 146 F--T-GL---NDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTD------I---TAPWGIAVD--EAGTVYVT 208 (270)
T ss_dssp C--C-SC---CSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSS------C---CSEEEEEEC--TTCCEEEE
T ss_pred c--c-cC---CCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccC------C---CCceEEEEC--CCCCEEEE
Confidence 0 0 00 12234444 5888887765558999999876543321110 1 111233322 56788888
Q ss_pred EEeecCCccceEEEEEECCCCCEEEEecccHHHHHHhhhccccCCccEEEEeeCCEEEEEeecCCeEEEEECCCCc
Q 018005 266 GGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYTWPEILYYNVARRT 341 (362)
Q Consensus 266 ~~~~~~~~~~~i~vw~l~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~v~~yd~~~~~ 341 (362)
.. ....+.+| +..+.-....... . .....-.++..++.+|+.....+.|.+|++...+
T Consensus 209 ~~-----~~~~v~~~--~~~~~~~~~~~~~--------~---~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 209 EH-----NTNQVVKL--LAGSTTSTVLPFT--------G---LNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp ET-----TTSCEEEE--CTTCSCCEECCCC--------S---CSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGG
T ss_pred EC-----CCCcEEEE--cCCCCcceeeccC--------C---CCCceeEEECCCCCEEEEECCCCEEEEEcCCCcc
Confidence 64 22456666 4333311111000 0 0011112233345689988777899999988764
No 63
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=92.24 E-value=8.4 Score=40.12 Aligned_cols=149 Identities=12% Similarity=0.061 Sum_probs=74.7
Q ss_pred ecCCceEEEecCCCCeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCccccccc
Q 018005 107 SSSKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDI 186 (362)
Q Consensus 107 ~s~~Gll~~~~~~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~~ 186 (362)
-+-+|-.++.+..++.+.+||..|++...--. .......++++.+++ +.++.++ ....+.+||..++.-...-.
T Consensus 623 ~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~-~h~~~v~~~~~s~~~---~~l~s~~--~d~~v~vwd~~~~~~~~~~~ 696 (1249)
T 3sfz_A 623 FSQDGQRIASCGADKTLQVFKAETGEKLLDIK-AHEDEVLCCAFSSDD---SYIATCS--ADKKVKIWDSATGKLVHTYD 696 (1249)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTCCEEEEEC-CCSSCEEEEEECTTS---SEEEEEE--TTSEEEEEETTTCCEEEEEE
T ss_pred ECCCCCEEEEEeCCCeEEEEECCCCCEEEEec-cCCCCEEEEEEecCC---CEEEEEe--CCCeEEEEECCCCceEEEEc
Confidence 34455333344456789999999987533211 111222344444332 2333343 34589999998764322110
Q ss_pred CCCCccccccCCCcccEEE----CCEEEEEecCCcEEEEEEcCCCeeecCCCCCcccccCCCCcccccceeecccCCCeE
Q 018005 187 DGFPSMILSQSSHQEGVFY----KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKL 262 (362)
Q Consensus 187 ~~~p~~~~~~~~~~~~v~~----~G~ly~~~~~~~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~L 262 (362)
... .....+.+ ++.+.+.++....+..+|+.+.+....... .......... . -+|++
T Consensus 697 -~~~-------~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~-------h~~~v~~~~~--s--p~~~~ 757 (1249)
T 3sfz_A 697 -EHS-------EQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFG-------HTNSVNHCRF--S--PDDEL 757 (1249)
T ss_dssp -CCS-------SCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECC-------CSSCEEEEEE--C--SSTTE
T ss_pred -CCC-------CcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecC-------CCCCEEEEEE--e--cCCCE
Confidence 100 11112222 334444455555789999987654321111 1122222222 1 57777
Q ss_pred EEEEEeecCCccceEEEEEECCC
Q 018005 263 YLIGGVGRNGISTTMKLWELGCG 285 (362)
Q Consensus 263 ~vv~~~~~~~~~~~i~vw~l~~~ 285 (362)
++.+. ....+.+|++...
T Consensus 758 l~s~s-----~dg~v~vwd~~~~ 775 (1249)
T 3sfz_A 758 LASCS-----ADGTLRLWDVRSA 775 (1249)
T ss_dssp EEEEE-----SSSEEEEEEGGGT
T ss_pred EEEEE-----CCCeEEEEeCCCC
Confidence 76665 2368999988533
No 64
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=92.15 E-value=4.7 Score=33.82 Aligned_cols=150 Identities=10% Similarity=0.082 Sum_probs=80.1
Q ss_pred ecCCceEEEecCCCCeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCccccccc
Q 018005 107 SSSKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDI 186 (362)
Q Consensus 107 ~s~~Gll~~~~~~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~~ 186 (362)
...+|-+++.......+.++|+..+....+.....-....+++++..+ ++++... ....+.+|+.....-....
T Consensus 128 ~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g---~l~v~~~--~~~~i~~~~~~g~~~~~~~- 201 (286)
T 1q7f_A 128 VDNKGRIIVVECKVMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQ---EIFISDN--RAHCVKVFNYEGQYLRQIG- 201 (286)
T ss_dssp ECTTSCEEEEETTTTEEEEECTTSCEEEEEECTTTCSSEEEEEECSSS---EEEEEEG--GGTEEEEEETTCCEEEEES-
T ss_pred EeCCCCEEEEECCCCEEEEEcCCCCEEEEeCCCCccCCcEEEEECCCC---CEEEEEC--CCCEEEEEcCCCCEEEEEc-
Confidence 344666666654457899999876555544322111122344444332 4555433 2357899998654333322
Q ss_pred CCCCccccccCCCcccEEE--CCEEEEEecCCc-EEEEEEcCCCeeecCCCCCcccccCCCCcccccceeecccCCCeEE
Q 018005 187 DGFPSMILSQSSHQEGVFY--KGSLYFTTPEPF-SIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLY 263 (362)
Q Consensus 187 ~~~p~~~~~~~~~~~~v~~--~G~ly~~~~~~~-~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~L~ 263 (362)
. .. .+ ....++.+ +|.+|+...... .|.+||+..+....+... .+.. ....+... -+|+|+
T Consensus 202 -~-~g-~~---~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~~~~~~~~~-------~~~~-~~~~i~~~--~~g~l~ 265 (286)
T 1q7f_A 202 -G-EG-IT---NYPIGVGINSNGEILIADNHNNFNLTIFTQDGQLISALESK-------VKHA-QCFDVALM--DDGSVV 265 (286)
T ss_dssp -C-TT-TS---CSEEEEEECTTCCEEEEECSSSCEEEEECTTSCEEEEEEES-------SCCS-CEEEEEEE--TTTEEE
T ss_pred -c-CC-cc---CCCcEEEECCCCCEEEEeCCCCEEEEEECCCCCEEEEEccc-------CCCC-cceeEEEC--CCCcEE
Confidence 1 10 00 12234555 688888776554 899999876544443212 1111 11123322 589988
Q ss_pred EEEEeecCCccceEEEEEECC
Q 018005 264 LIGGVGRNGISTTMKLWELGC 284 (362)
Q Consensus 264 vv~~~~~~~~~~~i~vw~l~~ 284 (362)
+... ..++.+|++..
T Consensus 266 vs~~------~~~v~v~~~~~ 280 (286)
T 1q7f_A 266 LASK------DYRLYIYRYVQ 280 (286)
T ss_dssp EEET------TTEEEEEECSC
T ss_pred EECC------CCeEEEEEccc
Confidence 8742 27899998753
No 65
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=92.08 E-value=5.9 Score=34.87 Aligned_cols=198 Identities=8% Similarity=0.024 Sum_probs=95.7
Q ss_pred CCceEEEecCCCCeEEEEeCCcCc--eeeccCCCC------CCcc-ceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCC
Q 018005 109 SKGLLCFSLPSSSSFLVCNLVTLS--SRTIDFPTY------PFDF-ELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQ 179 (362)
Q Consensus 109 ~~Gll~~~~~~~~~~~v~NP~t~~--w~~lP~~~~------~~~~-~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~ 179 (362)
.+|.|++... .+.++.+|+.|++ |..-..... .... ....... -+|++.. ....+..+|.+++
T Consensus 52 ~~~~v~~~~~-~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~----~~v~v~~---~~g~l~a~d~~tG 123 (376)
T 3q7m_A 52 ADNVVYAADR-AGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSG----GHVYIGS---EKAQVYALNTSDG 123 (376)
T ss_dssp ETTEEEEECT-TSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEET----TEEEEEE---TTSEEEEEETTTC
T ss_pred ECCEEEEEcC-CCeEEEEEccCCceeeeecCccccccccccCcccccCceEeC----CEEEEEc---CCCEEEEEECCCC
Confidence 4666666553 4688999999988 433221110 0001 1111211 1444432 2357889998766
Q ss_pred c--ccccccCCCCccccccCCCcccEEECCEEEEEecCCcEEEEEEcCCC--eeecCCCCCcccccCCCCcccccceeec
Q 018005 180 S--WSKFDIDGFPSMILSQSSHQEGVFYKGSLYFTTPEPFSIVRFDLENG--IWETPNDANDHMTMMLPHELTFFRLVND 255 (362)
Q Consensus 180 ~--W~~~~~~~~p~~~~~~~~~~~~v~~~G~ly~~~~~~~~i~~~D~~~~--~w~~~~~p~~~~~~~~p~~~~~~~lv~~ 255 (362)
+ |+... . . .....++..+|.+|+..... .+.+||.++. .|+.-. +.. ..........+.
T Consensus 124 ~~~W~~~~--~--~-----~~~~~p~~~~~~v~v~~~~g-~l~~~d~~tG~~~W~~~~-~~~-----~~~~~~~~~~~~- 186 (376)
T 3q7m_A 124 TVAWQTKV--A--G-----EALSRPVVSDGLVLIHTSNG-QLQALNEADGAVKWTVNL-DMP-----SLSLRGESAPTT- 186 (376)
T ss_dssp CEEEEEEC--S--S-----CCCSCCEEETTEEEEECTTS-EEEEEETTTCCEEEEEEC-CC----------CCCCCCEE-
T ss_pred CEEEEEeC--C--C-----ceEcCCEEECCEEEEEcCCC-eEEEEECCCCcEEEEEeC-CCC-----ceeecCCCCcEE-
Confidence 4 76543 1 1 12344677789888765443 7999998765 576521 100 000001112221
Q ss_pred ccCCCeEEEEEEeecCCccceEEEEEECCCCC-EEEEecccHHHHHHhhhccccCCccEEEEeeCCEEEEEeecCCeEEE
Q 018005 256 GEESNKLYLIGGVGRNGISTTMKLWELGCGGN-WIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYTWPEILY 334 (362)
Q Consensus 256 ~~~~G~L~vv~~~~~~~~~~~i~vw~l~~~~~-W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~v~~ 334 (362)
.+|.+++... ...+..+..+.... |+.-...|.... ...+.. . .....+..++.||+.. ..+.+.+
T Consensus 187 --~~~~v~~g~~------~g~l~~~d~~tG~~~w~~~~~~~~~~~-~~~~~~--~-~~~~p~~~~~~v~~~~-~~g~l~~ 253 (376)
T 3q7m_A 187 --AFGAAVVGGD------NGRVSAVLMEQGQMIWQQRISQATGST-EIDRLS--D-VDTTPVVVNGVVFALA-YNGNLTA 253 (376)
T ss_dssp --ETTEEEECCT------TTEEEEEETTTCCEEEEEECCC--------------C-CCCCCEEETTEEEEEC-TTSCEEE
T ss_pred --ECCEEEEEcC------CCEEEEEECCCCcEEEEEecccCCCCc-cccccc--c-cCCCcEEECCEEEEEe-cCcEEEE
Confidence 4666555321 23455554432222 876543322110 000000 0 0011123467888865 3568999
Q ss_pred EECCCCc--eEE
Q 018005 335 YNVARRT--WHW 344 (362)
Q Consensus 335 yd~~~~~--w~~ 344 (362)
+|+++++ |+.
T Consensus 254 ~d~~tG~~~w~~ 265 (376)
T 3q7m_A 254 LDLRSGQIMWKR 265 (376)
T ss_dssp EETTTCCEEEEE
T ss_pred EECCCCcEEeec
Confidence 9999874 544
No 66
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=92.04 E-value=10 Score=37.59 Aligned_cols=191 Identities=12% Similarity=0.004 Sum_probs=96.6
Q ss_pred CCceEEEecCCCCeEEEEeCCcC----ceeeccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCccccc
Q 018005 109 SKGLLCFSLPSSSSFLVCNLVTL----SSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKF 184 (362)
Q Consensus 109 ~~Gll~~~~~~~~~~~v~NP~t~----~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~ 184 (362)
.+|.||+.....+.++.+++... ....+-.... ..-.+++++..+ -+||+... ....+++++.....-+.+
T Consensus 434 ~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l-~~P~GLAvD~~~--~~LY~tD~--~~~~I~v~~ldG~~~~~l 508 (791)
T 3m0c_C 434 ASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI-QAPDGLAVDWIH--SNIYWTDS--VLGTVSVADTKGVKRKTL 508 (791)
T ss_dssp TTTEEEEEETTTTEEEEEEC--------CEEEECSSC-SCCCEEEEETTT--TEEEEEET--TTTEEEEEETTSSSEEEE
T ss_pred cCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCC-CCcceeeeeecC--CcEEEEec--CCCeEEEEeCCCCeEEEE
Confidence 35666666554566666666542 1122211000 112355665332 25666543 345888888875543333
Q ss_pred ccCCCCccccccCCCcccEEE---CCEEEEEecCC-cEEEEEEcCCCeeecCCCCCcccccCCCCcccc-cceeecccCC
Q 018005 185 DIDGFPSMILSQSSHQEGVFY---KGSLYFTTPEP-FSIVRFDLENGIWETPNDANDHMTMMLPHELTF-FRLVNDGEES 259 (362)
Q Consensus 185 ~~~~~p~~~~~~~~~~~~v~~---~G~ly~~~~~~-~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~-~~lv~~~~~~ 259 (362)
. . . ......++++ +|.|||..... ..|.++++....-..+. ...... ..|++. ..+
T Consensus 509 ~--~--~----~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv----------~~~l~~P~GLavD-~~~ 569 (791)
T 3m0c_C 509 F--R--E----NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV----------TENIQWPNGITLD-LLS 569 (791)
T ss_dssp E--E--C----TTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEE----------CSSCSCEEEEEEE-TTT
T ss_pred E--e--C----CCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEE----------eCCCCCceEEEEe-cCC
Confidence 2 0 0 0112445666 58999997543 57999999764333321 111111 123320 147
Q ss_pred CeEEEEEEeecCCccceEEEEEECCCCCEEEEecccHHHHHHhhhccccCCccEEEEeeCCEEEEEeecCCeEEEEECCC
Q 018005 260 NKLYLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYTWPEILYYNVAR 339 (362)
Q Consensus 260 G~L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~v~~yd~~~ 339 (362)
|+||++.. ....|++..++.....+.+..-. .+ ...+.....++.||+.......|...|..+
T Consensus 570 ~~LYwaD~-----~~~~I~~~d~dG~~~~~v~~~~~------~l------~~P~glav~~~~lYwtD~~~~~I~~~dk~t 632 (791)
T 3m0c_C 570 GRLYWVDS-----KLHSISSIDVNGGNRKTILEDEK------RL------AHPFSLAVFEDKVFWTDIINEAIFSANRLT 632 (791)
T ss_dssp TEEEEEET-----TTTEEEEEETTSCSCEEEEECTT------TT------SSEEEEEEETTEEEEEETTTTEEEEEETTT
T ss_pred CeEEEEeC-----CCCcEEEEecCCCceEEEecCCC------cc------CCCCEEEEeCCEEEEEECCCCEEEEEeCCC
Confidence 89999965 23566666554222244433210 00 012222235678888877777888888765
Q ss_pred C
Q 018005 340 R 340 (362)
Q Consensus 340 ~ 340 (362)
+
T Consensus 633 G 633 (791)
T 3m0c_C 633 G 633 (791)
T ss_dssp C
T ss_pred C
Confidence 5
No 67
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=92.00 E-value=6 Score=34.75 Aligned_cols=181 Identities=10% Similarity=0.001 Sum_probs=91.3
Q ss_pred CCeEEEEeCCcCceeeccCC-CCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCcccccccCCCCccccccCC
Q 018005 120 SSSFLVCNLVTLSSRTIDFP-TYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILSQSS 198 (362)
Q Consensus 120 ~~~~~v~NP~t~~w~~lP~~-~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~ 198 (362)
++.+.+||..+++....-.. ........+.+.+. .-..++.++ ....+.+||..++...... .... . ..
T Consensus 95 dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~~l~s~~--~d~~i~iwd~~~~~~~~~~--~~~~--~--~~ 164 (383)
T 3ei3_B 95 GGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQF--NTNQLFVSS--IRGATTLRDFSGSVIQVFA--KTDS--W--DY 164 (383)
T ss_dssp TSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETT--EEEEEEEEE--TTTEEEEEETTSCEEEEEE--CCCC--S--SC
T ss_pred CCeEEEEeCCCcccceeeecCCcCCceeEEEeCCC--CCCEEEEEe--CCCEEEEEECCCCceEEEe--ccCC--C--CC
Confidence 56788999998886554332 22223334444431 223444443 3468899999876655443 1111 0 00
Q ss_pred CcccEEE--CCEEEEEecCCcEEEEEEcCCCeeecCCCCCcccccCCCCcccccceeecccCCCe-EEEEEEeecCCccc
Q 018005 199 HQEGVFY--KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNK-LYLIGGVGRNGIST 275 (362)
Q Consensus 199 ~~~~v~~--~G~ly~~~~~~~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~-L~vv~~~~~~~~~~ 275 (362)
....+.+ +|...+.+.....+..||+..+....+.. ........... -+|+ +++.+. ...
T Consensus 165 ~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~--------h~~~v~~~~~~----~~~~~~l~s~~-----~d~ 227 (383)
T 3ei3_B 165 WYCCVDVSVSRQMLATGDSTGRLLLLGLDGHEIFKEKL--------HKAKVTHAEFN----PRCDWLMATSS-----VDA 227 (383)
T ss_dssp CEEEEEEETTTTEEEEEETTSEEEEEETTSCEEEEEEC--------SSSCEEEEEEC----SSCTTEEEEEE-----TTS
T ss_pred CeEEEEECCCCCEEEEECCCCCEEEEECCCCEEEEecc--------CCCcEEEEEEC----CCCCCEEEEEe-----CCC
Confidence 1112222 46666666666689999996554443321 11112222221 4566 666665 236
Q ss_pred eEEEEEECCCCC-EEEEecccHHHHHHhhhccccCCccEEEE--ee-CCEEEEEeecCCeEEEEECCCC
Q 018005 276 TMKLWELGCGGN-WIEVERVPEMMCRKFMSVCYHNYDHVYCF--WH-QGMICVCCYTWPEILYYNVARR 340 (362)
Q Consensus 276 ~i~vw~l~~~~~-W~~v~~~p~~~~~~~~~~~~~~~~~~~~~--~~-~~~i~~~~~~~~~v~~yd~~~~ 340 (362)
.+.+|++..... -..+..+. ....+.++ .. ++..++.....+.+.+||+++.
T Consensus 228 ~i~iwd~~~~~~~~~~~~~~~-------------~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~ 283 (383)
T 3ei3_B 228 TVKLWDLRNIKDKNSYIAEMP-------------HEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDW 283 (383)
T ss_dssp EEEEEEGGGCCSTTCEEEEEE-------------CSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBT
T ss_pred EEEEEeCCCCCcccceEEEec-------------CCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCC
Confidence 899998864321 11111111 11122222 22 3334444545678999998875
No 68
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=91.86 E-value=3.2 Score=36.59 Aligned_cols=195 Identities=13% Similarity=0.114 Sum_probs=85.5
Q ss_pred CCCeEEEEeCCcCceeeccCC------------CCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCccccccc
Q 018005 119 SSSSFLVCNLVTLSSRTIDFP------------TYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDI 186 (362)
Q Consensus 119 ~~~~~~v~NP~t~~w~~lP~~------------~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~~ 186 (362)
.++.+.+||..+++....... ........+.+.+.... +++.++ ....+.+||..++.-...-
T Consensus 64 ~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~l~s~~--~d~~i~iwd~~~~~~~~~~- 138 (408)
T 4a11_B 64 SDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTG--MFTSSS--FDKTLKVWDTNTLQTADVF- 138 (408)
T ss_dssp TTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTT--CEEEEE--TTSEEEEEETTTTEEEEEE-
T ss_pred CCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCc--EEEEEe--CCCeEEEeeCCCCccceec-
Confidence 356788888887764322110 01111223344332222 232232 3458899998876533222
Q ss_pred CCCCccccccCCCcccEEE-----CCEEEEEecCCcEEEEEEcCCCeeecCCCCCcccccCCCCcccccceeecccCCCe
Q 018005 187 DGFPSMILSQSSHQEGVFY-----KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNK 261 (362)
Q Consensus 187 ~~~p~~~~~~~~~~~~v~~-----~G~ly~~~~~~~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~ 261 (362)
..+. ....+.. ++.+.+.+.....+..||+.+.+....... ........... -+|+
T Consensus 139 -~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-------~~~~v~~~~~~----~~~~ 199 (408)
T 4a11_B 139 -NFEE-------TVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQG-------HRQEILAVSWS----PRYD 199 (408)
T ss_dssp -ECSS-------CEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECC-------CCSCEEEEEEC----SSCT
T ss_pred -cCCC-------ceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecC-------CCCcEEEEEEC----CCCC
Confidence 1111 0011111 344555555555789999876533221101 11111222221 3455
Q ss_pred -EEEEEEeecCCccceEEEEEECCCCC-EEEEecccHHHHHHhhhccccCCccEEEE--eeCCEEEEEeecCCeEEEEEC
Q 018005 262 -LYLIGGVGRNGISTTMKLWELGCGGN-WIEVERVPEMMCRKFMSVCYHNYDHVYCF--WHQGMICVCCYTWPEILYYNV 337 (362)
Q Consensus 262 -L~vv~~~~~~~~~~~i~vw~l~~~~~-W~~v~~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~v~~yd~ 337 (362)
+++.+. ....+.+|++..... ...+..-..................+.++ ..++..++.....+.+.+||+
T Consensus 200 ~ll~~~~-----~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~ 274 (408)
T 4a11_B 200 YILATAS-----ADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNS 274 (408)
T ss_dssp TEEEEEE-----TTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred cEEEEEc-----CCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEEC
Confidence 666655 236789998864432 22221100000000000000112223333 223334444445678999999
Q ss_pred CCCce
Q 018005 338 ARRTW 342 (362)
Q Consensus 338 ~~~~w 342 (362)
++++-
T Consensus 275 ~~~~~ 279 (408)
T 4a11_B 275 SNGEN 279 (408)
T ss_dssp TTCCB
T ss_pred CCCcc
Confidence 98753
No 69
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=91.82 E-value=6.8 Score=35.01 Aligned_cols=196 Identities=11% Similarity=0.051 Sum_probs=98.0
Q ss_pred CceEEEecCCCCeEEEEeCCcCceeeccCCCC----CCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCcccccc
Q 018005 110 KGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTY----PFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFD 185 (362)
Q Consensus 110 ~Gll~~~~~~~~~~~v~NP~t~~w~~lP~~~~----~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~ 185 (362)
+|.+++.+..++.+.+||+.+++.....+... ......+++.+. -++++.++ ....+.+||..+++-...-
T Consensus 133 ~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~~~s~~--~d~~v~~~d~~~~~~~~~~ 207 (433)
T 3bws_A 133 NTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEH---NELWVSQM--QANAVHVFDLKTLAYKATV 207 (433)
T ss_dssp SSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGG---TEEEEEEG--GGTEEEEEETTTCCEEEEE
T ss_pred CCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCC---CEEEEEEC--CCCEEEEEECCCceEEEEE
Confidence 66666666556789999999998765433211 111122333222 24454443 2358899998775432211
Q ss_pred cCCCCccccccCCCcccEEE--CC-EEEEEecCCcEEEEEEcCCCeeecCCCCCcccccCCCCcccccceeecccCCCeE
Q 018005 186 IDGFPSMILSQSSHQEGVFY--KG-SLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKL 262 (362)
Q Consensus 186 ~~~~p~~~~~~~~~~~~v~~--~G-~ly~~~~~~~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~L 262 (362)
+. .......+.+ +| .+|+.+.....|.+||+.+.+.... .+ .... ...+... -+|+.
T Consensus 208 ----~~----~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~-~~-------~~~~--~~~~~~~--~~g~~ 267 (433)
T 3bws_A 208 ----DL----TGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRK-TD-------KIGL--PRGLLLS--KDGKE 267 (433)
T ss_dssp ----EC----SSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEE-CC-------CCSE--EEEEEEC--TTSSE
T ss_pred ----cC----CCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEE-ec-------CCCC--ceEEEEc--CCCCE
Confidence 00 0011122222 34 4666655556899999987755432 11 1111 1222211 46665
Q ss_pred EEEEEeecCC---ccceEEEEEECCCCCEEEEecccHHHHHHhhhccccCCccEEEEe-eCCEEEEEeecCCeEEEEECC
Q 018005 263 YLIGGVGRNG---ISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCFW-HQGMICVCCYTWPEILYYNVA 338 (362)
Q Consensus 263 ~vv~~~~~~~---~~~~i~vw~l~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~v~~yd~~ 338 (362)
.+++...... ....+.+|.+. .++-......+ ....-.++. .++.+++.....+.+.+||++
T Consensus 268 l~~~~~~~~~~~~~dg~i~~~d~~-~~~~~~~~~~~-------------~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~ 333 (433)
T 3bws_A 268 LYIAQFSASNQESGGGRLGIYSMD-KEKLIDTIGPP-------------GNKRHIVSGNTENKIYVSDMCCSKIEVYDLK 333 (433)
T ss_dssp EEEEEEESCTTCSCCEEEEEEETT-TTEEEEEEEEE-------------ECEEEEEECSSTTEEEEEETTTTEEEEEETT
T ss_pred EEEEECCCCccccCCCeEEEEECC-CCcEEeeccCC-------------CCcceEEECCCCCEEEEEecCCCEEEEEECC
Confidence 5554432211 13578889774 33211111100 000111222 344677776667789999999
Q ss_pred CCceEE
Q 018005 339 RRTWHW 344 (362)
Q Consensus 339 ~~~w~~ 344 (362)
+++-..
T Consensus 334 ~~~~~~ 339 (433)
T 3bws_A 334 EKKVQK 339 (433)
T ss_dssp TTEEEE
T ss_pred CCcEEE
Confidence 875443
No 70
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=91.72 E-value=5.2 Score=33.47 Aligned_cols=221 Identities=13% Similarity=0.081 Sum_probs=111.5
Q ss_pred eeeeeeCCCCCeEeecCCcCCCCCCceEEEecCCceEEEecCCCCeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCc
Q 018005 77 QYPLYDSTHGTWRRLSLPYSLLLPSAATLLSSSKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSG 156 (362)
Q Consensus 77 ~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~~s~~Gll~~~~~~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ 156 (362)
.+..+|+. +....+..+.. ......+....+|-+++.....+.+..+|+. ++...+..+........++++..+
T Consensus 37 ~v~~~d~~-~~~~~~~~~~~--~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g-- 110 (299)
T 2z2n_A 37 MISCINLD-GKITEYPLPTP--DAKVMCLTISSDGEVWFTENAANKIGRITKK-GIIKEYTLPNPDSAPYGITEGPNG-- 110 (299)
T ss_dssp EEEEECTT-CCEEEEECSST--TCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTS--
T ss_pred cEEEEcCC-CCeEEecCCcc--cCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcEEEEeCCCcCCCceeeEECCCC--
Confidence 46678887 66665543311 1122223334566666654445679999986 555544422111222334444322
Q ss_pred eEEEEEeeecCCCeEEEEeCCCCcccccccCCCCccccccCCCcccEEE--CCEEEEEecCCcEEEEEEcCCCeeecCCC
Q 018005 157 YKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILSQSSHQEGVFY--KGSLYFTTPEPFSIVRFDLENGIWETPND 234 (362)
Q Consensus 157 ykv~~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~~~~v~~--~G~ly~~~~~~~~i~~~D~~~~~w~~~~~ 234 (362)
++++... ....+.+||. ++...... .+. .......+.+ +|.+|+.......+..||+ +++...+.
T Consensus 111 -~l~v~~~--~~~~i~~~d~-~g~~~~~~---~~~----~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~- 177 (299)
T 2z2n_A 111 -DIWFTEM--NGNRIGRITD-DGKIREYE---LPN----KGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFK- 177 (299)
T ss_dssp -CEEEEET--TTTEEEEECT-TCCEEEEE---CSS----TTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEE-
T ss_pred -CEEEEec--CCceEEEECC-CCCEEEec---CCC----CCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEee-
Confidence 3444322 2357888888 55544332 111 0012233444 5888887655567999999 66665432
Q ss_pred CCcccccCCCCccc-ccceeecccCCCeEEEEEEeecCCccceEEEEEECCCCCEEEEecccHHHHHHhhhccccCCccE
Q 018005 235 ANDHMTMMLPHELT-FFRLVNDGEESNKLYLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHV 313 (362)
Q Consensus 235 p~~~~~~~~p~~~~-~~~lv~~~~~~G~L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~ 313 (362)
.+.... ...+... .+|.|++... ....+.+| +..+....+. ++. . .....-
T Consensus 178 --------~~~~~~~~~~i~~~--~~g~l~v~~~-----~~~~i~~~--~~~g~~~~~~-~~~-------~---~~~~~~ 229 (299)
T 2z2n_A 178 --------IPTPASGPVGITKG--NDDALWFVEI-----IGNKIGRI--TTSGEITEFK-IPT-------P---NARPHA 229 (299)
T ss_dssp --------CSSTTCCEEEEEEC--TTSSEEEEET-----TTTEEEEE--CTTCCEEEEE-CSS-------T---TCCEEE
T ss_pred --------CCCCCCcceeEEEC--CCCCEEEEcc-----CCceEEEE--CCCCcEEEEE-CCC-------C---CCCcee
Confidence 221111 1233322 5688888764 12445555 5444454331 210 0 001111
Q ss_pred EEEeeCCEEEEEeecCCeEEEEECCCCceEEc
Q 018005 314 YCFWHQGMICVCCYTWPEILYYNVARRTWHWL 345 (362)
Q Consensus 314 ~~~~~~~~i~~~~~~~~~v~~yd~~~~~w~~~ 345 (362)
.++..++.+++.....+.|..||+ +++...+
T Consensus 230 i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~ 260 (299)
T 2z2n_A 230 ITAGAGIDLWFTEWGANKIGRLTS-NNIIEEY 260 (299)
T ss_dssp EEECSTTCEEEEETTTTEEEEEET-TTEEEEE
T ss_pred EEECCCCCEEEeccCCceEEEECC-CCceEEE
Confidence 222334568887655678999998 4555544
No 71
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=91.67 E-value=6.9 Score=34.77 Aligned_cols=152 Identities=14% Similarity=0.102 Sum_probs=73.8
Q ss_pred cCCceEEEecCCCCeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCcccccccC
Q 018005 108 SSKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDID 187 (362)
Q Consensus 108 s~~Gll~~~~~~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~~~ 187 (362)
+-+|-.++.+..++.+.+||..+++....-.. .......+.+.+.+. .++ .++ ....+.+||..++.-...-
T Consensus 132 s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~-h~~~v~~~~~~p~~~--~l~-s~s--~d~~v~iwd~~~~~~~~~~-- 203 (393)
T 1erj_A 132 SPDGKFLATGAEDRLIRIWDIENRKIVMILQG-HEQDIYSLDYFPSGD--KLV-SGS--GDRTVRIWDLRTGQCSLTL-- 203 (393)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEECTTSS--EEE-EEE--TTSEEEEEETTTTEEEEEE--
T ss_pred CCCCCEEEEEcCCCeEEEEECCCCcEEEEEcc-CCCCEEEEEEcCCCC--EEE-Eec--CCCcEEEEECCCCeeEEEE--
Confidence 44553333443467899999998875433211 112223444443321 333 333 3468899999876532221
Q ss_pred CCCccccccCCCcccEEE---CCEEEEEecCCcEEEEEEcCCCeeec-CCCCCcccccCCCCcccccceeecccCCCeEE
Q 018005 188 GFPSMILSQSSHQEGVFY---KGSLYFTTPEPFSIVRFDLENGIWET-PNDANDHMTMMLPHELTFFRLVNDGEESNKLY 263 (362)
Q Consensus 188 ~~p~~~~~~~~~~~~v~~---~G~ly~~~~~~~~i~~~D~~~~~w~~-~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~L~ 263 (362)
... .....+.+ +|.+.+.++....+..||+.+..... +..+.... ......-..+... -+|+++
T Consensus 204 ~~~-------~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~---~~h~~~v~~v~~~--~~g~~l 271 (393)
T 1erj_A 204 SIE-------DGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESG---TGHKDSVYSVVFT--RDGQSV 271 (393)
T ss_dssp ECS-------SCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC---------CCCSSCEEEEEEC--TTSSEE
T ss_pred EcC-------CCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCC---CCCCCCEEEEEEC--CCCCEE
Confidence 110 11112222 56666666666678999998764322 11110000 0000011122211 467777
Q ss_pred EEEEeecCCccceEEEEEECC
Q 018005 264 LIGGVGRNGISTTMKLWELGC 284 (362)
Q Consensus 264 vv~~~~~~~~~~~i~vw~l~~ 284 (362)
+.+. ....+.+|++..
T Consensus 272 ~s~s-----~d~~v~~wd~~~ 287 (393)
T 1erj_A 272 VSGS-----LDRSVKLWNLQN 287 (393)
T ss_dssp EEEE-----TTSEEEEEEC--
T ss_pred EEEe-----CCCEEEEEECCC
Confidence 6665 247899998853
No 72
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=91.50 E-value=2 Score=36.37 Aligned_cols=107 Identities=9% Similarity=-0.001 Sum_probs=64.7
Q ss_pred EECCEEEEEecCCcEEEEEEcCCCeeecCCCCCcccccCCCCcccccceeecccCCCeEEEEEEeecCCccceEEEEEEC
Q 018005 204 FYKGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGISTTMKLWELG 283 (362)
Q Consensus 204 ~~~G~ly~~~~~~~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~L~vv~~~~~~~~~~~i~vw~l~ 283 (362)
+.++.+|.-++....|.++|+++++-..-..+ .....-.+.. .+++||++.. ....+.|++.
T Consensus 62 ~~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~l~---------~~~FgeGit~---~g~~Ly~ltw-----~~~~v~V~D~- 123 (268)
T 3nok_A 62 FHQGHFFESTGHQGTLRQLSLESAQPVWMERL---------GNIFAEGLAS---DGERLYQLTW-----TEGLLFTWSG- 123 (268)
T ss_dssp EETTEEEEEETTTTEEEECCSSCSSCSEEEEC---------TTCCEEEEEE---CSSCEEEEES-----SSCEEEEEET-
T ss_pred EECCEEEEEcCCCCEEEEEECCCCcEEeEECC---------CCcceeEEEE---eCCEEEEEEc-----cCCEEEEEEC-
Confidence 44788998887665699999998754321122 2212223443 6889999865 2355555533
Q ss_pred CCCCEEEEecccHHHHHHhhhccccCCccEEEEeeCCEEEEEeecCCeEEEEECCCCceE
Q 018005 284 CGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYTWPEILYYNVARRTWH 343 (362)
Q Consensus 284 ~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~v~~yd~~~~~w~ 343 (362)
.+-+.+.+++.. ........+++.+|+.. .++++..+|+++.+-.
T Consensus 124 --~Tl~~~~ti~~~------------~eGwGLt~Dg~~L~vSd-Gs~~l~~iDp~T~~v~ 168 (268)
T 3nok_A 124 --MPPQRERTTRYS------------GEGWGLCYWNGKLVRSD-GGTMLTFHEPDGFALV 168 (268)
T ss_dssp --TTTEEEEEEECS------------SCCCCEEEETTEEEEEC-SSSEEEEECTTTCCEE
T ss_pred --CcCcEEEEEeCC------------CceeEEecCCCEEEEEC-CCCEEEEEcCCCCeEE
Confidence 234555555421 01222335677888887 4789999999986544
No 73
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=91.28 E-value=6.2 Score=33.53 Aligned_cols=194 Identities=10% Similarity=0.090 Sum_probs=91.9
Q ss_pred cCCceEEEecCCCCeEEEEeCCcCcee----eccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCcccc
Q 018005 108 SSKGLLCFSLPSSSSFLVCNLVTLSSR----TIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSK 183 (362)
Q Consensus 108 s~~Gll~~~~~~~~~~~v~NP~t~~w~----~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~ 183 (362)
+.+|-+++.+. ++.+.+||..+++.. .+...........+.+.+.+ +.+++++ ....+.+||..++....
T Consensus 60 ~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~--~d~~i~~~d~~~~~~~~ 133 (337)
T 1gxr_A 60 SNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDG---CTLIVGG--EASTLSIWDLAAPTPRI 133 (337)
T ss_dssp CSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTS---SEEEEEE--SSSEEEEEECCCC--EE
T ss_pred ecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCC---CEEEEEc--CCCcEEEEECCCCCcce
Confidence 34453333333 578999999886522 11111112222334444322 2333333 23589999998876543
Q ss_pred cccCCCCccccccCCCcccEEE--CCEEEEEecCCcEEEEEEcCCCeeecCCCCCcccccCCCCcccccceeecccCCCe
Q 018005 184 FDIDGFPSMILSQSSHQEGVFY--KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNK 261 (362)
Q Consensus 184 ~~~~~~p~~~~~~~~~~~~v~~--~G~ly~~~~~~~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~ 261 (362)
.. .+.. .......+.+ +|...+.+.....+..||+.+.+....... ...... .+... -+|+
T Consensus 134 ~~--~~~~----~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~-------~~~~i~--~~~~~--~~~~ 196 (337)
T 1gxr_A 134 KA--ELTS----SAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQG-------HTDGAS--CIDIS--NDGT 196 (337)
T ss_dssp EE--EEEC----SSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC-------CSSCEE--EEEEC--TTSS
T ss_pred ee--eccc----CCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeec-------ccCceE--EEEEC--CCCC
Confidence 32 1111 0011112222 566655665555799999987654332101 111111 22211 4677
Q ss_pred EEEEEEeecCCccceEEEEEECCCCCEEEEecccHHHHHHhhhccccCCccEEE--EeeCCEEEEEeecCCeEEEEECCC
Q 018005 262 LYLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYC--FWHQGMICVCCYTWPEILYYNVAR 339 (362)
Q Consensus 262 L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~v~~yd~~~ 339 (362)
+++++. ....+.+|++..... +..+.. ...+.+ +..++..++.....+.+.+||+++
T Consensus 197 ~l~~~~-----~dg~i~~~d~~~~~~---~~~~~~-------------~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~ 255 (337)
T 1gxr_A 197 KLWTGG-----LDNTVRSWDLREGRQ---LQQHDF-------------TSQIFSLGYCPTGEWLAVGMESSNVEVLHVNK 255 (337)
T ss_dssp EEEEEE-----TTSEEEEEETTTTEE---EEEEEC-------------SSCEEEEEECTTSSEEEEEETTSCEEEEETTS
T ss_pred EEEEEe-----cCCcEEEEECCCCce---EeeecC-------------CCceEEEEECCCCCEEEEEcCCCcEEEEECCC
Confidence 777665 236789997753221 111110 011122 222333344444566788999888
Q ss_pred CceEEc
Q 018005 340 RTWHWL 345 (362)
Q Consensus 340 ~~w~~~ 345 (362)
++-..+
T Consensus 256 ~~~~~~ 261 (337)
T 1gxr_A 256 PDKYQL 261 (337)
T ss_dssp SCEEEE
T ss_pred CCeEEE
Confidence 765544
No 74
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=91.09 E-value=3.2 Score=35.21 Aligned_cols=144 Identities=9% Similarity=0.038 Sum_probs=70.9
Q ss_pred EEEEEeeecCCCeEEEEeCCCCc--ccccccCCCCccccccCCCcccEEECCEEEEEecCCcEEEEEEcCC-CeeecCCC
Q 018005 158 KIFMLFAKSFPNYAFVYDSTDQS--WSKFDIDGFPSMILSQSSHQEGVFYKGSLYFTTPEPFSIVRFDLEN-GIWETPND 234 (362)
Q Consensus 158 kv~~~~~~~~~~~~~vy~s~~~~--W~~~~~~~~p~~~~~~~~~~~~v~~~G~ly~~~~~~~~i~~~D~~~-~~w~~~~~ 234 (362)
++++.+. ....+.++|.++++ |+... .-.. ......+.-+|.+++ .. ...+.+||+.. ..|+. ..
T Consensus 6 ~~lv~~~--~~~~v~~~d~~tG~~~w~~~~--~~~~-----~~~~~~~~pdG~ilv-s~-~~~V~~~d~~G~~~W~~-~~ 73 (276)
T 3no2_A 6 HLLVGGS--GWNKIAIINKDTKEIVWEYPL--EKGW-----ECNSVAATKAGEILF-SY-SKGAKMITRDGRELWNI-AA 73 (276)
T ss_dssp EEEEECT--TCSEEEEEETTTTEEEEEEEC--CTTC-----CCCEEEECTTSCEEE-EC-BSEEEEECTTSCEEEEE-EC
T ss_pred cEEEeeC--CCCEEEEEECCCCeEEEEeCC--CccC-----CCcCeEECCCCCEEE-eC-CCCEEEECCCCCEEEEE-cC
Confidence 5555543 34688899987764 77654 1100 011111222788877 33 34799999943 35654 21
Q ss_pred CCcccccCCCCcccccceeecccCCCeEEEEEEeecCCccceEEEEEECCCCC--EEEEecccHHHHHHhhhccccCCcc
Q 018005 235 ANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGISTTMKLWELGCGGN--WIEVERVPEMMCRKFMSVCYHNYDH 312 (362)
Q Consensus 235 p~~~~~~~~p~~~~~~~lv~~~~~~G~L~vv~~~~~~~~~~~i~vw~l~~~~~--W~~v~~~p~~~~~~~~~~~~~~~~~ 312 (362)
+ ..........+ .+|++++.... ..-.++.++.+++ |+.-..- ....... ....
T Consensus 74 ~-------~~~~~~~~~~~----~dG~~lv~~~~------~~~~v~~vd~~Gk~l~~~~~~~--~~~~~~~-----~~~~ 129 (276)
T 3no2_A 74 P-------AGCEMQTARIL----PDGNALVAWCG------HPSTILEVNMKGEVLSKTEFET--GIERPHA-----QFRQ 129 (276)
T ss_dssp C-------TTCEEEEEEEC----TTSCEEEEEES------TTEEEEEECTTSCEEEEEEECC--SCSSGGG-----SCSC
T ss_pred C-------CCccccccEEC----CCCCEEEEecC------CCCEEEEEeCCCCEEEEEeccC--CCCcccc-----cccC
Confidence 2 11111112222 68888887651 1346677777766 6543211 0000000 0011
Q ss_pred EEEEeeCCEEEEEeecCCeEEEEECC
Q 018005 313 VYCFWHQGMICVCCYTWPEILYYNVA 338 (362)
Q Consensus 313 ~~~~~~~~~i~~~~~~~~~v~~yd~~ 338 (362)
+ ....++.+++.....+.|.+||++
T Consensus 130 v-~~~~~G~~lv~~~~~~~v~~~d~~ 154 (276)
T 3no2_A 130 I-NKNKKGNYLVPLFATSEVREIAPN 154 (276)
T ss_dssp C-EECTTSCEEEEETTTTEEEEECTT
T ss_pred c-eECCCCCEEEEecCCCEEEEECCC
Confidence 1 222333345555556789999988
No 75
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=90.99 E-value=6.1 Score=32.89 Aligned_cols=192 Identities=14% Similarity=-0.001 Sum_probs=100.2
Q ss_pred ecCCceEEEecCCCCeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCccccccc
Q 018005 107 SSSKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDI 186 (362)
Q Consensus 107 ~s~~Gll~~~~~~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~~ 186 (362)
...+|.|++.....+.+.++++.++.-..+-.... ..-.+++++..+ -.+++... ....+.+++.....-+...
T Consensus 44 d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~-~~p~~ia~d~~~--~~lyv~d~--~~~~I~~~~~~g~~~~~~~- 117 (267)
T 1npe_A 44 DCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDL-GSPEGIALDHLG--RTIFWTDS--QLDRIEVAKMDGTQRRVLF- 117 (267)
T ss_dssp ETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTC-CCEEEEEEETTT--TEEEEEET--TTTEEEEEETTSCSCEEEE-
T ss_pred ecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCC-CCccEEEEEecC--CeEEEEEC--CCCEEEEEEcCCCCEEEEE-
Confidence 33467777776556789999998765433322111 122345555322 25565443 3457888888643322221
Q ss_pred CCCCccccccCCCcccEEE---CCEEEEEecC--CcEEEEEEcCCCeeecCC-CCCcccccCCCCcccccceeecccCCC
Q 018005 187 DGFPSMILSQSSHQEGVFY---KGSLYFTTPE--PFSIVRFDLENGIWETPN-DANDHMTMMLPHELTFFRLVNDGEESN 260 (362)
Q Consensus 187 ~~~p~~~~~~~~~~~~v~~---~G~ly~~~~~--~~~i~~~D~~~~~w~~~~-~p~~~~~~~~p~~~~~~~lv~~~~~~G 260 (362)
+. .. ....++.+ +|.+||.... ...|.+++++...-..+. ... ..|. .+... .-++
T Consensus 118 ---~~-~~---~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~~~-----~~P~-----gia~d-~~~~ 179 (267)
T 1npe_A 118 ---DT-GL---VNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNL-----GLPN-----GLTFD-AFSS 179 (267)
T ss_dssp ---CS-SC---SSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTC-----SCEE-----EEEEE-TTTT
T ss_pred ---EC-CC---CCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEECCC-----CCCc-----EEEEc-CCCC
Confidence 00 00 12234444 5899998754 357888988754332221 110 0122 23311 0257
Q ss_pred eEEEEEEeecCCccceEEEEEECCCCC-EEEEecccHHHHHHhhhccccCCccEEEEeeCCEEEEEeecCCeEEEEECCC
Q 018005 261 KLYLIGGVGRNGISTTMKLWELGCGGN-WIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYTWPEILYYNVAR 339 (362)
Q Consensus 261 ~L~vv~~~~~~~~~~~i~vw~l~~~~~-W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~v~~yd~~~ 339 (362)
.||+... ....|.++.++ +. -..+..- . . .+......++.+|+.....+.|..+|+++
T Consensus 180 ~lyv~d~-----~~~~I~~~~~~--g~~~~~~~~~--------~-----~-~P~gi~~d~~~lyva~~~~~~v~~~d~~~ 238 (267)
T 1npe_A 180 QLCWVDA-----GTHRAECLNPA--QPGRRKVLEG--------L-----Q-YPFAVTSYGKNLYYTDWKTNSVIAMDLAI 238 (267)
T ss_dssp EEEEEET-----TTTEEEEEETT--EEEEEEEEEC--------C-----C-SEEEEEEETTEEEEEETTTTEEEEEETTT
T ss_pred EEEEEEC-----CCCEEEEEecC--CCceEEEecC--------C-----C-CceEEEEeCCEEEEEECCCCeEEEEeCCC
Confidence 8888865 23566666543 32 1111100 0 0 11222234788999887778999999998
Q ss_pred CceE
Q 018005 340 RTWH 343 (362)
Q Consensus 340 ~~w~ 343 (362)
++..
T Consensus 239 g~~~ 242 (267)
T 1npe_A 239 SKEM 242 (267)
T ss_dssp TEEE
T ss_pred CCce
Confidence 7644
No 76
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=90.58 E-value=13 Score=36.38 Aligned_cols=199 Identities=13% Similarity=-0.016 Sum_probs=96.2
Q ss_pred EecCCceEEEecCCCCeEEEEeCCc----CceeeccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCcc
Q 018005 106 LSSSKGLLCFSLPSSSSFLVCNLVT----LSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSW 181 (362)
Q Consensus 106 ~~s~~Gll~~~~~~~~~~~v~NP~t----~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W 181 (362)
+...+|.|++.......++++++.+ .....+-.... ..-.+++++... -+|++... ....+.+++.....=
T Consensus 413 ~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~-~~P~glavD~~~--g~LY~tD~--~~~~I~v~d~dg~~~ 487 (699)
T 1n7d_A 413 TEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI-QAPDGLAVDWIH--SNIYWTDS--VLGTVSVADTKGVKR 487 (699)
T ss_dssp EETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC---CCCEECCCSS--SBCEECCT--TTSCEEEEBSSSCCE
T ss_pred cccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCC-CCcceEEEEeeC--CcEEEEec--cCCeEEEEecCCCce
Confidence 3445677877765556788888875 12111111000 011234443221 14444321 234678888765432
Q ss_pred cccccCCCCccccccCCCcccEEE---CCEEEEEecCC-cEEEEEEcCCCeeecCCCCCcccccCCCCcccccceeeccc
Q 018005 182 SKFDIDGFPSMILSQSSHQEGVFY---KGSLYFTTPEP-FSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGE 257 (362)
Q Consensus 182 ~~~~~~~~p~~~~~~~~~~~~v~~---~G~ly~~~~~~-~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~~~lv~~~~ 257 (362)
+... .. .+ ....++.+ +|.|||..... ..|.++++....-..+.... + ..|. .|... -
T Consensus 488 ~~l~--~~---~~---~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~--l--~~Pn-----Glavd-~ 549 (699)
T 1n7d_A 488 KTLF--RE---QG---SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTEN--I--QWPN-----GITLD-L 549 (699)
T ss_dssp EEEC--CC---SS---CCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSS--C--SSCC-----CEEEC-T
T ss_pred EEEE--eC---CC---CCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCC--C--CCcc-----EEEEe-c
Confidence 2221 10 01 12345555 58999987433 57888887643222211000 0 0232 23321 0
Q ss_pred CCCeEEEEEEeecCCccceEEEEEECCCCCEEEEecccHHHHHHhhhccccCCccEEEEeeCCEEEEEeecCCeEEEEEC
Q 018005 258 ESNKLYLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYTWPEILYYNV 337 (362)
Q Consensus 258 ~~G~L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~v~~yd~ 337 (362)
.+++||++.. ....|.++.++. ..-+.+...+. .+ . .+......++.||+.....+.|..+|+
T Consensus 550 ~~~~LY~aD~-----~~~~I~~~d~dG-~~~~~~~~~~~-----~~----~--~P~glavd~~~lywtd~~~~~V~~~d~ 612 (699)
T 1n7d_A 550 LSGRLYWVDS-----KLHSISSIDVNG-GNRKTILEDEK-----RL----A--HPFSLAVFEDKVFWTDIINEAIFSANR 612 (699)
T ss_dssp TTCCEEEEET-----TTTEEEEECSSS-SCCEEECCCSS-----SC----S--SCCCCEEETTEEEEECSTTTCEEEEET
T ss_pred cCCEEEEEec-----CCCeEEEEccCC-CceEEEEecCC-----cC----C--CceEeEEECCEEEEEeCCCCeEEEEEc
Confidence 3588999875 345666665532 22222222110 00 0 111112245688988877778999999
Q ss_pred CCCceEE
Q 018005 338 ARRTWHW 344 (362)
Q Consensus 338 ~~~~w~~ 344 (362)
.+++-..
T Consensus 613 ~~G~~~~ 619 (699)
T 1n7d_A 613 LTGSDVN 619 (699)
T ss_dssp TTEEEEE
T ss_pred cCCCceE
Confidence 8775544
No 77
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=90.56 E-value=8.1 Score=33.58 Aligned_cols=160 Identities=12% Similarity=0.138 Sum_probs=78.2
Q ss_pred CCceEEEecCCCCeEEEEeCCcCceeeccCC--CCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCccccccc
Q 018005 109 SKGLLCFSLPSSSSFLVCNLVTLSSRTIDFP--TYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDI 186 (362)
Q Consensus 109 ~~Gll~~~~~~~~~~~v~NP~t~~w~~lP~~--~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~~ 186 (362)
-+|-+++.+..++.+.+||..++++...... ........+++.+.+ +.++.++ ....+.+|+..++.+....
T Consensus 26 p~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g---~~l~s~s--~D~~v~iw~~~~~~~~~~~- 99 (345)
T 3fm0_A 26 PAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCG---NYLASAS--FDATTCIWKKNQDDFECVT- 99 (345)
T ss_dssp TTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTS---SEEEEEE--TTSCEEEEEECCC-EEEEE-
T ss_pred CCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCC---CEEEEEE--CCCcEEEEEccCCCeEEEE-
Confidence 3443333333457889999988876533221 122223344554432 2333333 3457888888777664433
Q ss_pred CCCCccccccCCCcccEEE--CCEEEEEecCCcEEEEEEcCCC-eeecCCCCCcccccCCCCcccccceeecccCCCeEE
Q 018005 187 DGFPSMILSQSSHQEGVFY--KGSLYFTTPEPFSIVRFDLENG-IWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLY 263 (362)
Q Consensus 187 ~~~p~~~~~~~~~~~~v~~--~G~ly~~~~~~~~i~~~D~~~~-~w~~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~L~ 263 (362)
.+.. ....-..+.+ +|...+.++....+..+|+.++ ....+..... ..... ..+... -+|+++
T Consensus 100 -~~~~----h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~-----h~~~v--~~~~~~--p~~~~l 165 (345)
T 3fm0_A 100 -TLEG----HENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNS-----HTQDV--KHVVWH--PSQELL 165 (345)
T ss_dssp -EECC----CSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECC-----CCSCE--EEEEEC--SSSSCE
T ss_pred -EccC----CCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecC-----cCCCe--EEEEEC--CCCCEE
Confidence 1111 0011122333 4666666665567889998754 2222110000 11111 122211 467766
Q ss_pred EEEEeecCCccceEEEEEECCCCCEEEEecc
Q 018005 264 LIGGVGRNGISTTMKLWELGCGGNWIEVERV 294 (362)
Q Consensus 264 vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~~ 294 (362)
+.+. ....+.+|+++ .+.|..+..+
T Consensus 166 ~s~s-----~d~~i~~w~~~-~~~~~~~~~~ 190 (345)
T 3fm0_A 166 ASAS-----YDDTVKLYREE-EDDWVCCATL 190 (345)
T ss_dssp EEEE-----TTSCEEEEEEE-TTEEEEEEEE
T ss_pred EEEe-----CCCcEEEEEec-CCCEEEEEEe
Confidence 6665 23678999884 4457655544
No 78
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=90.55 E-value=5.3 Score=34.77 Aligned_cols=152 Identities=9% Similarity=0.082 Sum_probs=76.6
Q ss_pred EEEEeeecCCCeEEEEeCCCCcccccccCCCCccccccCCCcccEEE--CCEEEEEecCCcEEEEEEcCCCeeecCCC-C
Q 018005 159 IFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILSQSSHQEGVFY--KGSLYFTTPEPFSIVRFDLENGIWETPND-A 235 (362)
Q Consensus 159 v~~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~~~~v~~--~G~ly~~~~~~~~i~~~D~~~~~w~~~~~-p 235 (362)
+++.++ ....+.+|+..++.|.... .... .. ...-..+.+ +|...+.++....+..+|..++.+..+.. .
T Consensus 30 ~las~~--~D~~i~iw~~~~~~~~~~~--~~~~-~h--~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~ 102 (345)
T 3fm0_A 30 LLASCG--GDRRIRIWGTEGDSWICKS--VLSE-GH--QRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLE 102 (345)
T ss_dssp CEEEEE--TTSCEEEEEEETTEEEEEE--EECS-SC--SSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEEC
T ss_pred EEEEEc--CCCeEEEEEcCCCcceeee--eecc-cc--CCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEcc
Confidence 344444 3457889999888775332 1100 00 011122333 46665556555578889988765543210 0
Q ss_pred CcccccCCCCcccccceeecccCCCeEEEEEEeecCCccceEEEEEECCCCCEEEEecccHHHHHHhhhccccCCccEEE
Q 018005 236 NDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYC 315 (362)
Q Consensus 236 ~~~~~~~~p~~~~~~~lv~~~~~~G~L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~ 315 (362)
. ...... .+... -+|++++.+. ...++.+|+++....+..+..+. .+...+.+
T Consensus 103 ~------h~~~v~--~v~~s--p~~~~l~s~s-----~D~~v~iwd~~~~~~~~~~~~~~------------~h~~~v~~ 155 (345)
T 3fm0_A 103 G------HENEVK--SVAWA--PSGNLLATCS-----RDKSVWVWEVDEEDEYECVSVLN------------SHTQDVKH 155 (345)
T ss_dssp C------CSSCEE--EEEEC--TTSSEEEEEE-----TTSCEEEEEECTTSCEEEEEEEC------------CCCSCEEE
T ss_pred C------CCCCce--EEEEe--CCCCEEEEEE-----CCCeEEEEECCCCCCeEEEEEec------------CcCCCeEE
Confidence 0 111111 22211 4677777765 23789999997555565554431 01112222
Q ss_pred E--eeCCEEEEEeecCCeEEEEECCCCceEE
Q 018005 316 F--WHQGMICVCCYTWPEILYYNVARRTWHW 344 (362)
Q Consensus 316 ~--~~~~~i~~~~~~~~~v~~yd~~~~~w~~ 344 (362)
+ ..++.+++.....+.+.+||.++++|..
T Consensus 156 ~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~ 186 (345)
T 3fm0_A 156 VVWHPSQELLASASYDDTVKLYREEEDDWVC 186 (345)
T ss_dssp EEECSSSSCEEEEETTSCEEEEEEETTEEEE
T ss_pred EEECCCCCEEEEEeCCCcEEEEEecCCCEEE
Confidence 2 2223334444455678888888776653
No 79
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=90.15 E-value=10 Score=34.14 Aligned_cols=109 Identities=6% Similarity=-0.045 Sum_probs=57.1
Q ss_pred CceEEEecCCCCeEEEEeCCcCceeeccC-CCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCcccccccCC
Q 018005 110 KGLLCFSLPSSSSFLVCNLVTLSSRTIDF-PTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDG 188 (362)
Q Consensus 110 ~Gll~~~~~~~~~~~v~NP~t~~w~~lP~-~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~~~~ 188 (362)
++-+++.+..++.+.|||..+++...+-. ........++.+.+.... .++. ++ ....+.+||.+++.-+... .
T Consensus 131 ~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~-~l~s-~s--~D~~v~iwd~~~~~~~~~~--~ 204 (435)
T 4e54_B 131 HPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTN-QFYA-SS--MEGTTRLQDFKGNILRVFA--S 204 (435)
T ss_dssp CTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTT-EEEE-EC--SSSCEEEEETTSCEEEEEE--C
T ss_pred CCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCC-EEEE-Ee--CCCEEEEeeccCCceeEEe--c
Confidence 44233334346789999999887543322 222233345555432222 3333 32 3457889998876554433 1
Q ss_pred CCccccccCCCcccEEE--CCEEEEEecCCcEEEEEEcCCCe
Q 018005 189 FPSMILSQSSHQEGVFY--KGSLYFTTPEPFSIVRFDLENGI 228 (362)
Q Consensus 189 ~p~~~~~~~~~~~~v~~--~G~ly~~~~~~~~i~~~D~~~~~ 228 (362)
... . ......+.+ +|.+.+.+.....|..+|+..+.
T Consensus 205 ~~~--~--~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~ 242 (435)
T 4e54_B 205 SDT--I--NIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKE 242 (435)
T ss_dssp CSS--C--SCCCCCEEEETTTTEEEEECSSSBEEEEESSSCB
T ss_pred cCC--C--CccEEEEEECCCCCEEEEEeCCCcEeeeccCcce
Confidence 111 0 011122222 56666666665678999987654
No 80
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=90.11 E-value=8.4 Score=33.06 Aligned_cols=98 Identities=6% Similarity=-0.090 Sum_probs=48.5
Q ss_pred CCCeEEEEeCCcCc--eeeccCCCC--CCccceEEEEe-CCCceEEEEEeeecCCCeEEEEeCCCCcccccccCCCCccc
Q 018005 119 SSSSFLVCNLVTLS--SRTIDFPTY--PFDFELLTLVS-TPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMI 193 (362)
Q Consensus 119 ~~~~~~v~NP~t~~--w~~lP~~~~--~~~~~~~~~~~-~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~ 193 (362)
.++.+.+||..+++ ...+..... ......+++.. -......++.++ ....+.+||..++.=.... ...
T Consensus 137 ~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~--~d~~i~i~d~~~~~~~~~~--~~~--- 209 (357)
T 3i2n_A 137 RDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGY--DNGDIKLFDLRNMALRWET--NIK--- 209 (357)
T ss_dssp TTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEE--TTSEEEEEETTTTEEEEEE--ECS---
T ss_pred CCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEc--cCCeEEEEECccCceeeec--CCC---
Confidence 45789999998876 333332221 11222333221 111223344443 3458999999876532211 111
Q ss_pred cccCCCcccEEE-----CCEEEEEecCCcEEEEEEcCCC
Q 018005 194 LSQSSHQEGVFY-----KGSLYFTTPEPFSIVRFDLENG 227 (362)
Q Consensus 194 ~~~~~~~~~v~~-----~G~ly~~~~~~~~i~~~D~~~~ 227 (362)
.....+.+ +|...+.+.....+..||+.+.
T Consensus 210 ----~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 244 (357)
T 3i2n_A 210 ----NGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQ 244 (357)
T ss_dssp ----SCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEE
T ss_pred ----CceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCC
Confidence 11122222 4566666665567888988754
No 81
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=89.81 E-value=8.6 Score=32.75 Aligned_cols=186 Identities=14% Similarity=0.090 Sum_probs=83.2
Q ss_pred CCeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCcccccccCCCCccccccCCC
Q 018005 120 SSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILSQSSH 199 (362)
Q Consensus 120 ~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~ 199 (362)
++.+.+||.....-..............+.+...... .+++.++ ....+.+||..++.-...-. +.. ..
T Consensus 149 d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~s~~--~d~~i~i~d~~~~~~~~~~~-~h~-------~~ 217 (340)
T 4aow_A 149 DKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PIIVSCG--WDKLVKVWNLANCKLKTNHI-GHT-------GY 217 (340)
T ss_dssp TSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSS-CEEEEEE--TTSCEEEEETTTTEEEEEEC-CCS-------SC
T ss_pred CCeEEEEEeCCCceEEEEeccccCcccceEEccCCCC-cEEEEEc--CCCEEEEEECCCCceeeEec-CCC-------Cc
Confidence 4677888876665443332222222223333332222 3333333 33578899987764322210 100 11
Q ss_pred cccEEE--CCEEEEEecCCcEEEEEEcCCCeeecCCCCCcccccCCCCcccccceeecccCCCeEEEEEEeecCCccceE
Q 018005 200 QEGVFY--KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGISTTM 277 (362)
Q Consensus 200 ~~~v~~--~G~ly~~~~~~~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~L~vv~~~~~~~~~~~i 277 (362)
-..+.+ +|.+.+.++....+..||+.+.+-.... . .... -..+.. ..+..+++++. ...+
T Consensus 218 v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~-~-------~~~~--v~~~~~---~~~~~~~~~~~-----d~~i 279 (340)
T 4aow_A 218 LNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL-D-------GGDI--INALCF---SPNRYWLCAAT-----GPSI 279 (340)
T ss_dssp EEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEE-E-------CSSC--EEEEEE---CSSSSEEEEEE-----TTEE
T ss_pred EEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeee-c-------CCce--EEeeec---CCCCceeeccC-----CCEE
Confidence 122333 4666666666568899999875432211 1 1111 112221 23333344432 2678
Q ss_pred EEEEECCCCC-EEEEecccHHHHHHhhhccccCCccEEEE--eeCCEEEEEeecCCeEEEEECCCCc
Q 018005 278 KLWELGCGGN-WIEVERVPEMMCRKFMSVCYHNYDHVYCF--WHQGMICVCCYTWPEILYYNVARRT 341 (362)
Q Consensus 278 ~vw~l~~~~~-W~~v~~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~v~~yd~~~~~ 341 (362)
.+|+++.... +..-.... ..... .....+.++ ..++..++.+...+.|.+||+++++
T Consensus 280 ~iwd~~~~~~~~~~~~~~~----~~~~~---~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 280 KIWDLEGKIIVDELKQEVI----STSSK---AEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp EEEETTTTEEEEEECCC--------------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred EEEECCCCeEEEeccccce----eeecc---CCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 9997742221 22111110 00000 111223333 3344445555566789999999874
No 82
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=89.10 E-value=9.9 Score=32.45 Aligned_cols=199 Identities=8% Similarity=-0.080 Sum_probs=96.8
Q ss_pred CCceEEEecCCCCeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCcccccccCC
Q 018005 109 SKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDG 188 (362)
Q Consensus 109 ~~Gll~~~~~~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~~~~ 188 (362)
.+|-|++.......++.+||.++.-..+... ....+++++..+ ++++.........+..|+..+++.+... .
T Consensus 41 ~~g~lyv~d~~~~~I~~~d~~g~~~~~~~~~---~~p~gia~~~dG---~l~vad~~~~~~~v~~~d~~~g~~~~~~--~ 112 (306)
T 2p4o_A 41 PDGTIFVTNHEVGEIVSITPDGNQQIHATVE---GKVSGLAFTSNG---DLVATGWNADSIPVVSLVKSDGTVETLL--T 112 (306)
T ss_dssp TTSCEEEEETTTTEEEEECTTCCEEEEEECS---SEEEEEEECTTS---CEEEEEECTTSCEEEEEECTTSCEEEEE--E
T ss_pred CCCCEEEEeCCCCeEEEECCCCceEEEEeCC---CCceeEEEcCCC---cEEEEeccCCcceEEEEcCCCCeEEEEE--e
Confidence 3565666554457888899887643333221 122344444332 3555443222335778888887766544 2
Q ss_pred CCccccccCCCcccEE--ECCEEEEEecCCcEEEEEEcCCCeeecC-CCCCcccccCCCCcc-cccceeecccCCCeEEE
Q 018005 189 FPSMILSQSSHQEGVF--YKGSLYFTTPEPFSIVRFDLENGIWETP-NDANDHMTMMLPHEL-TFFRLVNDGEESNKLYL 264 (362)
Q Consensus 189 ~p~~~~~~~~~~~~v~--~~G~ly~~~~~~~~i~~~D~~~~~w~~~-~~p~~~~~~~~p~~~-~~~~lv~~~~~~G~L~v 264 (362)
.+. . ...+++. .++.+|+.......+..+|+.+..-+.. ..+. .......... ....+. . -++.||+
T Consensus 113 ~~~----~-~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~-~~~~~~~~~~~~pngis-~--dg~~lyv 183 (306)
T 2p4o_A 113 LPD----A-IFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPM-LARSNSESVFPAANGLK-R--FGNFLYV 183 (306)
T ss_dssp CTT----C-SCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGG-GSCSSTTCCSCSEEEEE-E--ETTEEEE
T ss_pred CCC----c-cccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCc-cccccccCCCCcCCCcC-c--CCCEEEE
Confidence 222 0 1112222 2456777665445789999876422110 0000 0000000111 112232 1 3456887
Q ss_pred EEEeecCCccceEEEEEECCCCC---EEEEecccHHHHHHhhhccccCCccEEEEeeCCEEEEEeecCCeEEEEECCCCc
Q 018005 265 IGGVGRNGISTTMKLWELGCGGN---WIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYTWPEILYYNVARRT 341 (362)
Q Consensus 265 v~~~~~~~~~~~i~vw~l~~~~~---W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~v~~yd~~~~~ 341 (362)
... ....+.++.++..+. ....... ....-.++..++.+|+.....+.|..||++ ++
T Consensus 184 ~d~-----~~~~I~~~~~~~~g~~~~~~~~~~~--------------~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~ 243 (306)
T 2p4o_A 184 SNT-----EKMLLLRIPVDSTDKPGEPEIFVEQ--------------TNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RS 243 (306)
T ss_dssp EET-----TTTEEEEEEBCTTSCBCCCEEEEES--------------CCCSSEEEBTTCCEEEECBTTCCEEEECTT-CC
T ss_pred EeC-----CCCEEEEEEeCCCCCCCccEEEecc--------------CCCCCeEECCCCCEEEEeCCCCeEEEECCC-CC
Confidence 764 346777777754232 2212111 001112344455678887767789999986 55
Q ss_pred eEE
Q 018005 342 WHW 344 (362)
Q Consensus 342 w~~ 344 (362)
...
T Consensus 244 ~~~ 246 (306)
T 2p4o_A 244 TTI 246 (306)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 83
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=88.94 E-value=12 Score=33.16 Aligned_cols=206 Identities=12% Similarity=0.065 Sum_probs=98.8
Q ss_pred CceEEEecCCCCeEEEEeCCcCceeecc-----CC-CCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCcccc
Q 018005 110 KGLLCFSLPSSSSFLVCNLVTLSSRTID-----FP-TYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSK 183 (362)
Q Consensus 110 ~Gll~~~~~~~~~~~v~NP~t~~w~~lP-----~~-~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~ 183 (362)
+|-+++.+..++.+.+||..+++...-. .. ........+.+.+.+. .+++.++ ....+.+||..++.-..
T Consensus 93 ~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~--~~l~s~~--~dg~i~iwd~~~~~~~~ 168 (402)
T 2aq5_A 93 NDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQ--NVLLSAG--CDNVILVWDVGTGAAVL 168 (402)
T ss_dssp CTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBT--TEEEEEE--TTSCEEEEETTTTEEEE
T ss_pred CCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCC--CEEEEEc--CCCEEEEEECCCCCccE
Confidence 4533333434688999999887532110 00 0111222344433321 1333333 34578999998765422
Q ss_pred cccCCCCccccccCCCcccEEE--CCEEEEEecCCcEEEEEEcCCCeeecCCCCCcccccCCCCcccccceeecccCCCe
Q 018005 184 FDIDGFPSMILSQSSHQEGVFY--KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNK 261 (362)
Q Consensus 184 ~~~~~~p~~~~~~~~~~~~v~~--~G~ly~~~~~~~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~ 261 (362)
.- .... . ......+.+ +|...+.+.....+..||+.+.+-...... ...+.....+... -+|+
T Consensus 169 ~~--~~~~--~--~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-------~~~~~~~~~~~~~--~~~~ 233 (402)
T 2aq5_A 169 TL--GPDV--H--PDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDR-------PHEGTRPVHAVFV--SEGK 233 (402)
T ss_dssp EE--CTTT--C--CSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEEC-------SSCSSSCCEEEEC--STTE
T ss_pred EE--ecCC--C--CCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeecc-------CCCCCcceEEEEc--CCCc
Confidence 11 0000 0 011122333 566666666666899999987654321101 1111111222212 5788
Q ss_pred EEEEEEeecCCccceEEEEEECCCCCEEEEecccHHHHHHhhhccccCCccEEEE-eeCCEEEEEeecCCeEEEEECCCC
Q 018005 262 LYLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCF-WHQGMICVCCYTWPEILYYNVARR 340 (362)
Q Consensus 262 L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~v~~yd~~~~ 340 (362)
+++++... .....+.+|++.....=.....++. .......++ ..++.+++.+...+.|.+||++++
T Consensus 234 ~l~~g~~~--~~d~~i~iwd~~~~~~~~~~~~~~~-----------~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~ 300 (402)
T 2aq5_A 234 ILTTGFSR--MSERQVALWDTKHLEEPLSLQELDT-----------SSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSE 300 (402)
T ss_dssp EEEEEECT--TCCEEEEEEETTBCSSCSEEEECCC-----------CSSCEEEEEETTTTEEEEEETTCSCEEEEEECSS
T ss_pred EEEEeccC--CCCceEEEEcCccccCCceEEeccC-----------CCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCC
Confidence 77776311 2347899998854332111111110 000111122 234566666655678999999987
Q ss_pred c--eEEcCC
Q 018005 341 T--WHWLPS 347 (362)
Q Consensus 341 ~--w~~~~~ 347 (362)
+ ...+..
T Consensus 301 ~~~~~~l~~ 309 (402)
T 2aq5_A 301 APFLHYLSM 309 (402)
T ss_dssp TTCEEEEEE
T ss_pred CcceEeecc
Confidence 6 555543
No 84
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=88.91 E-value=9.8 Score=32.16 Aligned_cols=200 Identities=9% Similarity=0.120 Sum_probs=93.0
Q ss_pred CCceEEEecCCCCeEEEEeCCcCceeeccCC-CCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCcccccccC
Q 018005 109 SKGLLCFSLPSSSSFLVCNLVTLSSRTIDFP-TYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDID 187 (362)
Q Consensus 109 ~~Gll~~~~~~~~~~~v~NP~t~~w~~lP~~-~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~~~ 187 (362)
.+|-.++.+..++.+.+||..++....+-.+ ........+.+.+.. .-++++.++ ....+.+||..++.|....
T Consensus 19 ~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~-~g~~l~s~s--~D~~v~iWd~~~~~~~~~~-- 93 (297)
T 2pm7_B 19 YYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPK-FGTILASCS--YDGKVMIWKEENGRWSQIA-- 93 (297)
T ss_dssp TTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGG-GCSEEEEEE--TTTEEEEEEBSSSCBCCCE--
T ss_pred CCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCC-cCCEEEEEc--CCCEEEEEEcCCCceEEEE--
Confidence 3443333333457788998865432221111 111122234443211 113344443 3468999999988876543
Q ss_pred CCCccccccCCCcccEEEC----CEEEEEecCCcEEEEEEcCCCe-eecCCCCCcccccCCCCcccccceeec-------
Q 018005 188 GFPSMILSQSSHQEGVFYK----GSLYFTTPEPFSIVRFDLENGI-WETPNDANDHMTMMLPHELTFFRLVND------- 255 (362)
Q Consensus 188 ~~p~~~~~~~~~~~~v~~~----G~ly~~~~~~~~i~~~D~~~~~-w~~~~~p~~~~~~~~p~~~~~~~lv~~------- 255 (362)
.+.. ....-..+.+. |.+.+.+.....+..+|+.+.. +....... .............
T Consensus 94 ~~~~----h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~------h~~~v~~~~~~p~~~~~~~~ 163 (297)
T 2pm7_B 94 VHAV----HSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDA------HAIGVNSASWAPATIEEDGE 163 (297)
T ss_dssp EECC----CSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEEC------CSSCEEEEEECCCC------
T ss_pred Eeec----CCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeec------ccCccceEeecCCccccccc
Confidence 1111 00112233332 5555556555678889987642 21110000 1111111000000
Q ss_pred --ccCCCeEEEEEEeecCCccceEEEEEECCCCC-EEEEecccHHHHHHhhhccccCCccEEEE-ee-C---CEEEEEee
Q 018005 256 --GEESNKLYLIGGVGRNGISTTMKLWELGCGGN-WIEVERVPEMMCRKFMSVCYHNYDHVYCF-WH-Q---GMICVCCY 327 (362)
Q Consensus 256 --~~~~G~L~vv~~~~~~~~~~~i~vw~l~~~~~-W~~v~~~p~~~~~~~~~~~~~~~~~~~~~-~~-~---~~i~~~~~ 327 (362)
+..++++++.++ ...++.+|+++.... |.....+. ++...+.++ .. + +..++...
T Consensus 164 ~~~~~~~~~l~sgs-----~D~~v~lwd~~~~~~~~~~~~~l~------------~H~~~V~~v~~sp~~~~~~~las~s 226 (297)
T 2pm7_B 164 HNGTKESRKFVTGG-----ADNLVKIWKYNSDAQTYVLESTLE------------GHSDWVRDVAWSPTVLLRSYMASVS 226 (297)
T ss_dssp ------CCEEEEEE-----TTSCEEEEEEETTTTEEEEEEEEC------------CCSSCEEEEEECCCCSSSEEEEEEE
T ss_pred CCCCCCcceEEEEc-----CCCcEEEEEEcCCCceEEEEEEec------------CCCCceEEEEECCCCCCceEEEEEE
Confidence 001245666655 237899999965544 76665542 111223333 11 2 34555555
Q ss_pred cCCeEEEEECCCC
Q 018005 328 TWPEILYYNVARR 340 (362)
Q Consensus 328 ~~~~v~~yd~~~~ 340 (362)
..+.+.+||+++.
T Consensus 227 ~D~~v~iWd~~~~ 239 (297)
T 2pm7_B 227 QDRTCIIWTQDNE 239 (297)
T ss_dssp TTSCEEEEEESST
T ss_pred CCCcEEEEEeCCC
Confidence 6678999998764
No 85
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=88.88 E-value=19 Score=35.32 Aligned_cols=138 Identities=11% Similarity=0.064 Sum_probs=68.4
Q ss_pred CCCeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCcccccccCCCCccccccCC
Q 018005 119 SSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILSQSS 198 (362)
Q Consensus 119 ~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~ 198 (362)
.++.+.+||..+++....-.. ......++.+.+.+ +.+++++ ....+.+|+..++.....-. ... .
T Consensus 33 ~~g~v~iwd~~~~~~~~~~~~-~~~~v~~~~~s~~~---~~l~~~~--~dg~i~vw~~~~~~~~~~~~-~~~-------~ 98 (814)
T 3mkq_A 33 YSGRVEIWNYETQVEVRSIQV-TETPVRAGKFIARK---NWIIVGS--DDFRIRVFNYNTGEKVVDFE-AHP-------D 98 (814)
T ss_dssp TTSEEEEEETTTTEEEEEEEC-CSSCEEEEEEEGGG---TEEEEEE--TTSEEEEEETTTCCEEEEEE-CCS-------S
T ss_pred CCCEEEEEECCCCceEEEEec-CCCcEEEEEEeCCC---CEEEEEe--CCCeEEEEECCCCcEEEEEe-cCC-------C
Confidence 356788999888775432111 11223344555432 2333343 24689999988776432210 111 1
Q ss_pred CcccEEE--CCEEEEEecCCcEEEEEEcCCC-eeecCCCCCcccccCCCCcccccceeecccC-CCeEEEEEEeecCCcc
Q 018005 199 HQEGVFY--KGSLYFTTPEPFSIVRFDLENG-IWETPNDANDHMTMMLPHELTFFRLVNDGEE-SNKLYLIGGVGRNGIS 274 (362)
Q Consensus 199 ~~~~v~~--~G~ly~~~~~~~~i~~~D~~~~-~w~~~~~p~~~~~~~~p~~~~~~~lv~~~~~-~G~L~vv~~~~~~~~~ 274 (362)
.-..+.+ +|...+.+.....+..||..++ ........ ........... - +|.+++++. ..
T Consensus 99 ~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~-------~~~~v~~~~~~----p~~~~~l~~~~-----~d 162 (814)
T 3mkq_A 99 YIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEG-------HEHFVMCVAFN----PKDPSTFASGC-----LD 162 (814)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEEC-------CSSCEEEEEEE----TTEEEEEEEEE-----TT
T ss_pred CEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcC-------CCCcEEEEEEE----cCCCCEEEEEe-----CC
Confidence 1112222 4554445555558999998765 33221101 11111111111 2 566666665 23
Q ss_pred ceEEEEEECCCC
Q 018005 275 TTMKLWELGCGG 286 (362)
Q Consensus 275 ~~i~vw~l~~~~ 286 (362)
..+.+|.++...
T Consensus 163 g~v~vwd~~~~~ 174 (814)
T 3mkq_A 163 RTVKVWSLGQST 174 (814)
T ss_dssp SEEEEEETTCSS
T ss_pred CeEEEEECCCCc
Confidence 689999885433
No 86
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=88.24 E-value=12 Score=32.33 Aligned_cols=155 Identities=12% Similarity=0.135 Sum_probs=79.7
Q ss_pred CceEEEecCCCCeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCcccccccCCC
Q 018005 110 KGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGF 189 (362)
Q Consensus 110 ~Gll~~~~~~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~~~~~ 189 (362)
+|-.++.+..++.+.+||..+++....-..........+++.+.+ ++++.++ ....+.+||..++.-.... +
T Consensus 138 ~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg---~~lasg~--~dg~i~iwd~~~~~~~~~~---~ 209 (343)
T 3lrv_A 138 NTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDS---LLLALYS--PDGILDVYNLSSPDQASSR---F 209 (343)
T ss_dssp -CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTS---CEEEEEC--TTSCEEEEESSCTTSCCEE---C
T ss_pred CCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCC---CEEEEEc--CCCEEEEEECCCCCCCccE---E
Confidence 343333333467899999999887554333222223345554432 4455544 3468999999876432111 0
Q ss_pred CccccccCCCcccEEE--CCEEEEEecCCcEEEEEEcCCCee-ecCCCCCcccccCCCCc-cc--ccceeecccCCCeEE
Q 018005 190 PSMILSQSSHQEGVFY--KGSLYFTTPEPFSIVRFDLENGIW-ETPNDANDHMTMMLPHE-LT--FFRLVNDGEESNKLY 263 (362)
Q Consensus 190 p~~~~~~~~~~~~v~~--~G~ly~~~~~~~~i~~~D~~~~~w-~~~~~p~~~~~~~~p~~-~~--~~~lv~~~~~~G~L~ 263 (362)
.. .....-..+.+ +|...+.+... .+..+|+.+.+- ..+. + +... .. ...+... -+|+++
T Consensus 210 ~~---~h~~~v~~l~fs~~g~~l~s~~~~-~v~iwd~~~~~~~~~~~-~-------~~~~~~~~~~~~~~~~--~~g~~l 275 (343)
T 3lrv_A 210 PV---DEEAKIKEVKFADNGYWMVVECDQ-TVVCFDLRKDVGTLAYP-T-------YTIPEFKTGTVTYDID--DSGKNM 275 (343)
T ss_dssp CC---CTTSCEEEEEECTTSSEEEEEESS-BEEEEETTSSTTCBSSC-C-------CBC-----CCEEEEEC--TTSSEE
T ss_pred ec---cCCCCEEEEEEeCCCCEEEEEeCC-eEEEEEcCCCCcceeec-c-------cccccccccceEEEEC--CCCCEE
Confidence 00 00011122333 46555555544 899999986532 1111 1 1000 00 0113212 578877
Q ss_pred EEEEeecCCccceEEEEEECCCCC-EEE
Q 018005 264 LIGGVGRNGISTTMKLWELGCGGN-WIE 290 (362)
Q Consensus 264 vv~~~~~~~~~~~i~vw~l~~~~~-W~~ 290 (362)
+++.. ....+.||.++.... |..
T Consensus 276 ~~~s~----~d~~i~v~~~~~~~~~~~~ 299 (343)
T 3lrv_A 276 IAYSN----ESNSLTIYKFDKKTKNWTK 299 (343)
T ss_dssp EEEET----TTTEEEEEEECTTTCSEEE
T ss_pred EEecC----CCCcEEEEEEcccccceEe
Confidence 77651 246899999976554 997
No 87
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=87.90 E-value=12 Score=32.08 Aligned_cols=187 Identities=11% Similarity=0.056 Sum_probs=91.8
Q ss_pred CCceEEEecCCCCeEEEEeCCcCceee-ccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCcccccccC
Q 018005 109 SKGLLCFSLPSSSSFLVCNLVTLSSRT-IDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDID 187 (362)
Q Consensus 109 ~~Gll~~~~~~~~~~~v~NP~t~~w~~-lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~~~ 187 (362)
.++-+++.+..++.+.+||..+++... +...+ .....+++.+.+ +.++.++ ....+.+|+..++.=...-
T Consensus 90 ~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~--~~~~~~~~spdg---~~l~~g~--~dg~v~i~~~~~~~~~~~~-- 160 (321)
T 3ow8_A 90 HTLPIAASSSLDAHIRLWDLENGKQIKSIDAGP--VDAWTLAFSPDS---QYLATGT--HVGKVNIFGVESGKKEYSL-- 160 (321)
T ss_dssp SSSSEEEEEETTSEEEEEETTTTEEEEEEECCT--TCCCCEEECTTS---SEEEEEC--TTSEEEEEETTTCSEEEEE--
T ss_pred CCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCC--ccEEEEEECCCC---CEEEEEc--CCCcEEEEEcCCCceeEEe--
Confidence 344444444456889999999887533 22111 112234454332 2333333 3457889988765421111
Q ss_pred CCCccccccCCCcccEEE--CCEEEEEecCCcEEEEEEcCCCeeecCCCCCcccccCCCCcccccceeecccCCCeEEEE
Q 018005 188 GFPSMILSQSSHQEGVFY--KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLI 265 (362)
Q Consensus 188 ~~p~~~~~~~~~~~~v~~--~G~ly~~~~~~~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~L~vv 265 (362)
.. .. .....+.+ +|...+.+.....+..||+.+.+-...... ...... .+... -+|++++.
T Consensus 161 --~~---~~-~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~-------h~~~v~--~l~~s--pd~~~l~s 223 (321)
T 3ow8_A 161 --DT---RG-KFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEG-------HAMPIR--SLTFS--PDSQLLVT 223 (321)
T ss_dssp --EC---SS-SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC-------CSSCCC--EEEEC--TTSCEEEE
T ss_pred --cC---CC-ceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcc-------cCCcee--EEEEc--CCCCEEEE
Confidence 00 00 01112222 566666666556789999987654321101 111111 22211 47777766
Q ss_pred EEeecCCccceEEEEEECCCCCEEEEecccHHHHHHhhhccccCCccEEEE--eeCCEEEEEeecCCeEEEEECCCCc
Q 018005 266 GGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCF--WHQGMICVCCYTWPEILYYNVARRT 341 (362)
Q Consensus 266 ~~~~~~~~~~~i~vw~l~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~v~~yd~~~~~ 341 (362)
+. ....+.+|++.. ..- +..+. +....+.++ ..++..++.....+.+.+||+++++
T Consensus 224 ~s-----~dg~i~iwd~~~-~~~--~~~~~------------~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~ 281 (321)
T 3ow8_A 224 AS-----DDGYIKIYDVQH-ANL--AGTLS------------GHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRT 281 (321)
T ss_dssp EC-----TTSCEEEEETTT-CCE--EEEEC------------CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred Ec-----CCCeEEEEECCC-cce--eEEEc------------CCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCE
Confidence 65 246799998753 221 11211 111122222 2234344555556678888888764
No 88
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=87.62 E-value=23 Score=34.86 Aligned_cols=199 Identities=11% Similarity=0.080 Sum_probs=101.3
Q ss_pred CCceEEEecCCCCeEEEEeCCcCceeeccCCCCC-CccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCcccccccC
Q 018005 109 SKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYP-FDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDID 187 (362)
Q Consensus 109 ~~Gll~~~~~~~~~~~v~NP~t~~w~~lP~~~~~-~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~~~ 187 (362)
.+|-|.+.. ..+.++.+|+.|+++..++..... ....++..+. .. .+.+ +.. ..+.+|+..++.|+...
T Consensus 416 ~~g~lWigt-~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~--~g-~lwi-gt~---~Gl~~~~~~~~~~~~~~-- 485 (781)
T 3v9f_A 416 SEGNLWFGT-YLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDK--NK-KIWI-GTH---AGVFVIDLASKKVIHHY-- 485 (781)
T ss_dssp TTSCEEEEE-TTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECT--TS-EEEE-EET---TEEEEEESSSSSCCEEE--
T ss_pred CCCCEEEEe-ccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECC--CC-CEEE-EEC---CceEEEeCCCCeEEecc--
Confidence 455454432 235789999999998877643111 1122222222 22 3333 221 46889999999887664
Q ss_pred CCCccccccCCCcccEEE--CCEEEEEecCCcEEEEEEcCCCeeecCCCCCcccccCCCCcccccceeecccCCCeEEEE
Q 018005 188 GFPSMILSQSSHQEGVFY--KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLI 265 (362)
Q Consensus 188 ~~p~~~~~~~~~~~~v~~--~G~ly~~~~~~~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~L~vv 265 (362)
..+...... .....+.. +|.++ ++.....+..||++++++..+..+. . +|... -..+... .+|.|++.
T Consensus 486 ~~~~~~~~~-~~i~~i~~d~~g~lW-igt~~~Gl~~~~~~~~~~~~~~~~~----~-l~~~~-i~~i~~d--~~g~lWi~ 555 (781)
T 3v9f_A 486 DTSNSQLLE-NFVRSIAQDSEGRFW-IGTFGGGVGIYTPDMQLVRKFNQYE----G-FCSNT-INQIYRS--SKGQMWLA 555 (781)
T ss_dssp CTTTSSCSC-SCEEEEEECTTCCEE-EEESSSCEEEECTTCCEEEEECTTT----T-CSCSC-EEEEEEC--TTSCEEEE
T ss_pred cCccccccc-ceeEEEEEcCCCCEE-EEEcCCCEEEEeCCCCeEEEccCCC----C-CCCCe-eEEEEEC--CCCCEEEE
Confidence 222101111 11223333 46665 4444335899999998887653221 0 33221 1233322 57888886
Q ss_pred EEeecCCccceEEEEEECCCC-CEEEEecccHHHHHHhhhccccCCccEEEEeeCCEEEEEeecCCeEEEEECCCCceEE
Q 018005 266 GGVGRNGISTTMKLWELGCGG-NWIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYTWPEILYYNVARRTWHW 344 (362)
Q Consensus 266 ~~~~~~~~~~~i~vw~l~~~~-~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~v~~yd~~~~~w~~ 344 (362)
.. ..+ ++.++..+ .++....-. .+. .......+...++.|++.. ...+..||+++++++.
T Consensus 556 T~-------~Gl-v~~~d~~~~~~~~~~~~~-----gl~----~~~i~~i~~d~~g~lW~~t--~~Gl~~~~~~~~~~~~ 616 (781)
T 3v9f_A 556 TG-------EGL-VCFPSARNFDYQVFQRKE-----GLP----NTHIRAISEDKNGNIWAST--NTGISCYITSKKCFYT 616 (781)
T ss_dssp ET-------TEE-EEESCTTTCCCEEECGGG-----TCS----CCCCCEEEECSSSCEEEEC--SSCEEEEETTTTEEEE
T ss_pred EC-------CCc-eEEECCCCCcEEEccccC-----CCC----CceEEEEEECCCCCEEEEc--CCceEEEECCCCceEE
Confidence 53 222 14445443 355443210 010 0011111123356778864 4569999999988877
Q ss_pred cC
Q 018005 345 LP 346 (362)
Q Consensus 345 ~~ 346 (362)
..
T Consensus 617 ~~ 618 (781)
T 3v9f_A 617 YD 618 (781)
T ss_dssp EC
T ss_pred ec
Confidence 53
No 89
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=87.26 E-value=14 Score=31.95 Aligned_cols=191 Identities=10% Similarity=0.087 Sum_probs=89.3
Q ss_pred CCceEEEecCCCCeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCc--cccccc
Q 018005 109 SKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQS--WSKFDI 186 (362)
Q Consensus 109 ~~Gll~~~~~~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~--W~~~~~ 186 (362)
.+|-+++.+..++.+.+||..+++....-+.. ......+++.+.+ +.++.++ ....+.+|+..++. .+...
T Consensus 65 ~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~-~~~v~~~~~s~~~---~~l~s~~--~d~~v~iw~~~~~~~~~~~~~- 137 (340)
T 1got_B 65 TDSRLLLSASQDGKLIIWDSYTTNKVHAIPLR-SSWVMTCAYAPSG---NYVACGG--LDNICSIYNLKTREGNVRVSR- 137 (340)
T ss_dssp TTSSEEEEEETTTEEEEEETTTCCEEEEEECS-SSCEEEEEECTTS---SEEEEEE--TTCEEEEEETTTCSBSCEEEE-
T ss_pred CCCCEEEEEeCCCcEEEEECCCCCcceEeecC-CccEEEEEECCCC---CEEEEEe--CCCeEEEEECccCCCcceeEE-
Confidence 34433333334678999998887743321111 1112233443322 2344444 34688899987643 11111
Q ss_pred CCCCccccccCCCcccEEE-CCEEEEEecCCcEEEEEEcCCCeeecCCCCCcccccCCCCcccccceeecccCCCeEEEE
Q 018005 187 DGFPSMILSQSSHQEGVFY-KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLI 265 (362)
Q Consensus 187 ~~~p~~~~~~~~~~~~v~~-~G~ly~~~~~~~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~L~vv 265 (362)
.+.. . ........+. +|.+. .+.....+..+|+.+.+-...... ...... .+... -+|++++.
T Consensus 138 -~~~~--h-~~~v~~~~~~~~~~l~-s~s~d~~i~~wd~~~~~~~~~~~~-------h~~~v~--~~~~~--~~~~~l~s 201 (340)
T 1got_B 138 -ELAG--H-TGYLSCCRFLDDNQIV-TSSGDTTCALWDIETGQQTTTFTG-------HTGDVM--SLSLA--PDTRLFVS 201 (340)
T ss_dssp -EEEC--C-SSCEEEEEEEETTEEE-EEETTSCEEEEETTTTEEEEEECC-------CSSCEE--EEEEC--TTSSEEEE
T ss_pred -EecC--C-CccEEEEEECCCCcEE-EEECCCcEEEEECCCCcEEEEEcC-------CCCceE--EEEEC--CCCCEEEE
Confidence 0100 0 0000111122 45543 344445789999987654321111 111111 22211 47777777
Q ss_pred EEeecCCccceEEEEEECCCCCEEEEecccHHHHHHhhhccccCCccEEEE--eeCCEEEEEeecCCeEEEEECCCCce
Q 018005 266 GGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCF--WHQGMICVCCYTWPEILYYNVARRTW 342 (362)
Q Consensus 266 ~~~~~~~~~~~i~vw~l~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~v~~yd~~~~~w 342 (362)
++ ....+.+|++.. +. .+..+. .+...+.++ ..++..++.+...+.+.+||+++++-
T Consensus 202 g~-----~d~~v~~wd~~~-~~--~~~~~~------------~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~ 260 (340)
T 1got_B 202 GA-----CDASAKLWDVRE-GM--CRQTFT------------GHESDINAICFFPNGNAFATGSDDATCRLFDLRADQE 260 (340)
T ss_dssp EE-----TTSCEEEEETTT-CS--EEEEEC------------CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE
T ss_pred Ee-----CCCcEEEEECCC-Ce--eEEEEc------------CCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcE
Confidence 66 237899998743 22 111110 011222222 22334455555667899999987643
No 90
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=87.21 E-value=13 Score=31.74 Aligned_cols=104 Identities=8% Similarity=-0.016 Sum_probs=48.2
Q ss_pred CCeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCc--ccccccCCCCccccccC
Q 018005 120 SSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQS--WSKFDIDGFPSMILSQS 197 (362)
Q Consensus 120 ~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~--W~~~~~~~~p~~~~~~~ 197 (362)
++.+.+||..+++...+...........+.+.+...+-..++.++ ....+.+||..++. -.... .... ....-
T Consensus 43 d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~--~~~~-~v~~~ 117 (357)
T 3i2n_A 43 TGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGD--FGGNLHIWNLEAPEMPVYSVK--GHKE-IINAI 117 (357)
T ss_dssp CEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEE--TTSCEEEECTTSCSSCSEEEC--CCSS-CEEEE
T ss_pred CcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEec--CCCeEEEEeCCCCCccEEEEE--eccc-ceEEE
Confidence 567889999888765433222222222333333210013333333 24578899987764 11111 1110 00000
Q ss_pred CCcc--cEEECCEEEEEecCCcEEEEEEcCCCe
Q 018005 198 SHQE--GVFYKGSLYFTTPEPFSIVRFDLENGI 228 (362)
Q Consensus 198 ~~~~--~v~~~G~ly~~~~~~~~i~~~D~~~~~ 228 (362)
.... ...-+|...+.+.....+..||+.+..
T Consensus 118 ~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~ 150 (357)
T 3i2n_A 118 DGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKD 150 (357)
T ss_dssp EEESGGGCC-CCCEEEEEETTSCEEEECTTSCS
T ss_pred eeccccccCCCccEEEEEeCCCeEEEEeCCCCC
Confidence 0000 011245555555555578999998754
No 91
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=87.04 E-value=8.8 Score=32.77 Aligned_cols=106 Identities=12% Similarity=0.073 Sum_probs=60.3
Q ss_pred CCEEEEEecCCcEEEEEEcCCCeeecCCCCCcccccCCCCcccccceeecccCCCeEEEEEEeecCCccceEEEEEEC-C
Q 018005 206 KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGISTTMKLWELG-C 284 (362)
Q Consensus 206 ~G~ly~~~~~~~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~L~vv~~~~~~~~~~~i~vw~l~-~ 284 (362)
+|.+|+.......|..||++.+.-.... .+.. -..+... -+|+||+.... .....|+.++ .
T Consensus 42 ~g~lyv~d~~~~~I~~~d~~g~~~~~~~---------~~~~--p~gia~~--~dG~l~vad~~-----~~~~~v~~~d~~ 103 (306)
T 2p4o_A 42 DGTIFVTNHEVGEIVSITPDGNQQIHAT---------VEGK--VSGLAFT--SNGDLVATGWN-----ADSIPVVSLVKS 103 (306)
T ss_dssp TSCEEEEETTTTEEEEECTTCCEEEEEE---------CSSE--EEEEEEC--TTSCEEEEEEC-----TTSCEEEEEECT
T ss_pred CCCEEEEeCCCCeEEEECCCCceEEEEe---------CCCC--ceeEEEc--CCCcEEEEecc-----CCcceEEEEcCC
Confidence 6889999866668999999875322222 2211 1223322 57899887652 1233455554 3
Q ss_pred CCCEEEEecccHHHHHHhhhccccCCccEEEEeeCCEEEEEeecCCeEEEEECCCC
Q 018005 285 GGNWIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYTWPEILYYNVARR 340 (362)
Q Consensus 285 ~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~v~~yd~~~~ 340 (362)
+++.+.+..++. . ....-.++..++.+|+.....+.++.+|+.++
T Consensus 104 ~g~~~~~~~~~~------~-----~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~ 148 (306)
T 2p4o_A 104 DGTVETLLTLPD------A-----IFLNGITPLSDTQYLTADSYRGAIWLIDVVQP 148 (306)
T ss_dssp TSCEEEEEECTT------C-----SCEEEEEESSSSEEEEEETTTTEEEEEETTTT
T ss_pred CCeEEEEEeCCC------c-----cccCcccccCCCcEEEEECCCCeEEEEeCCCC
Confidence 455666655431 0 11111223456677887655678999998865
No 92
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=86.99 E-value=14 Score=31.84 Aligned_cols=155 Identities=11% Similarity=0.141 Sum_probs=75.2
Q ss_pred CCCeEEEEeCCcCceeec-cCCCCCCccceEEEEeCC----------CceEEEEEeeecCCCeEEEEeCCCCc--ccccc
Q 018005 119 SSSSFLVCNLVTLSSRTI-DFPTYPFDFELLTLVSTP----------SGYKIFMLFAKSFPNYAFVYDSTDQS--WSKFD 185 (362)
Q Consensus 119 ~~~~~~v~NP~t~~w~~l-P~~~~~~~~~~~~~~~~~----------~~ykv~~~~~~~~~~~~~vy~s~~~~--W~~~~ 185 (362)
.++.+.+||..+++.... ...........+.+.+.. .+...++.++ ....+.+||..++. |....
T Consensus 123 ~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~ 200 (379)
T 3jrp_A 123 SDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGG--ADNLVKIWKYNSDAQTYVLES 200 (379)
T ss_dssp TTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEE--TTSCEEEEEEETTTTEEEEEE
T ss_pred CCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEe--CCCeEEEEEecCCCcceeeEE
Confidence 467899999888742111 100111122233333310 0123344443 23578888886543 43332
Q ss_pred cCCCCccccccCCCcccEEE--C---CEEEEEecCCcEEEEEEcCCCe----eecCCCCCcccccCCCCcccccceeecc
Q 018005 186 IDGFPSMILSQSSHQEGVFY--K---GSLYFTTPEPFSIVRFDLENGI----WETPNDANDHMTMMLPHELTFFRLVNDG 256 (362)
Q Consensus 186 ~~~~p~~~~~~~~~~~~v~~--~---G~ly~~~~~~~~i~~~D~~~~~----w~~~~~p~~~~~~~~p~~~~~~~lv~~~ 256 (362)
.+.. ....-..+.+ + |.+.+.++....+..||+.+.. ........ .+........ .
T Consensus 201 --~~~~----h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~------~~~~v~~~~~--s- 265 (379)
T 3jrp_A 201 --TLEG----HSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEK------FPDVLWRASW--S- 265 (379)
T ss_dssp --EECC----CSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSC------CSSCEEEEEE--C-
T ss_pred --EEec----ccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeecccc------CCCcEEEEEE--c-
Confidence 1111 0011122333 3 5666666655678999988752 22211000 1111111122 1
Q ss_pred cCCCeEEEEEEeecCCccceEEEEEECCCCCEEEEecccH
Q 018005 257 EESNKLYLIGGVGRNGISTTMKLWELGCGGNWIEVERVPE 296 (362)
Q Consensus 257 ~~~G~L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~~p~ 296 (362)
-+|++++++.. ...+.+|+++..+.|..+..+..
T Consensus 266 -~~g~~l~~~~~-----dg~i~iw~~~~~~~~~~~~~~~~ 299 (379)
T 3jrp_A 266 -LSGNVLALSGG-----DNKVTLWKENLEGKWEPAGEVHQ 299 (379)
T ss_dssp -SSSCCEEEEES-----SSSEEEEEEEETTEEEEEEEEC-
T ss_pred -CCCCEEEEecC-----CCcEEEEeCCCCCccccccceec
Confidence 57776666652 36799999976667988877643
No 93
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=86.96 E-value=25 Score=34.59 Aligned_cols=220 Identities=10% Similarity=0.087 Sum_probs=106.5
Q ss_pred eeeeeeCCCCCeEeecCCcCCCCCCceEEEecCCceEEEecCCCCeEEEEeCCcCceeeccCCCC----CCccceEEEEe
Q 018005 77 QYPLYDSTHGTWRRLSLPYSLLLPSAATLLSSSKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTY----PFDFELLTLVS 152 (362)
Q Consensus 77 ~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~~s~~Gll~~~~~~~~~~~v~NP~t~~w~~lP~~~~----~~~~~~~~~~~ 152 (362)
.+..||+..+++..+..+ .++...-..+....+|-+.+... ..++++||.++++..+..... ......+..+.
T Consensus 428 Gl~~~~~~~~~~~~~~~~-~~~~~~v~~i~~d~~g~lwigt~--~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~ 504 (781)
T 3v9f_A 428 NISYYNTRLKKFQIIELE-KNELLDVRVFYEDKNKKIWIGTH--AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDS 504 (781)
T ss_dssp EEEEECSSSCEEEECCST-TTCCCCEEEEEECTTSEEEEEET--TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECT
T ss_pred CEEEEcCCCCcEEEeccC-CCCCCeEEEEEECCCCCEEEEEC--CceEEEeCCCCeEEecccCcccccccceeEEEEEcC
Confidence 345566666665555322 11111112233344665655442 578999999999877654321 11112222222
Q ss_pred CCCceEEEEEeeecCCCeEEEEeCCCCcccccccCCCCccccccCCCcccEEE--CCEEEEEecCCcEE-EEEEcCCCee
Q 018005 153 TPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILSQSSHQEGVFY--KGSLYFTTPEPFSI-VRFDLENGIW 229 (362)
Q Consensus 153 ~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~~~~v~~--~G~ly~~~~~~~~i-~~~D~~~~~w 229 (362)
.+ .+.+ +.. ...+..|+..++.++... . +. .++. .....++. +|.+++ +.. ..+ ..||++++++
T Consensus 505 ~g---~lWi-gt~--~~Gl~~~~~~~~~~~~~~--~-~~-~l~~-~~i~~i~~d~~g~lWi-~T~-~Glv~~~d~~~~~~ 571 (781)
T 3v9f_A 505 EG---RFWI-GTF--GGGVGIYTPDMQLVRKFN--Q-YE-GFCS-NTINQIYRSSKGQMWL-ATG-EGLVCFPSARNFDY 571 (781)
T ss_dssp TC---CEEE-EES--SSCEEEECTTCCEEEEEC--T-TT-TCSC-SCEEEEEECTTSCEEE-EET-TEEEEESCTTTCCC
T ss_pred CC---CEEE-EEc--CCCEEEEeCCCCeEEEcc--C-CC-CCCC-CeeEEEEECCCCCEEE-EEC-CCceEEECCCCCcE
Confidence 21 3332 221 134778999888887654 1 11 1211 11223343 577654 444 357 8999998887
Q ss_pred ecCCCCCcccccCCCCcccccceeecccCCCeEEEEEEeecCCccceEEEEEECCCCC-EEEEecccHHHHHHhhhcccc
Q 018005 230 ETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGISTTMKLWELGCGGN-WIEVERVPEMMCRKFMSVCYH 308 (362)
Q Consensus 230 ~~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~L~vv~~~~~~~~~~~i~vw~l~~~~~-W~~v~~~p~~~~~~~~~~~~~ 308 (362)
..+... .+ +|.... ..++.. .+|.|++.+. ..+..+ +..+. ......-. .+.. .
T Consensus 572 ~~~~~~----~g-l~~~~i-~~i~~d--~~g~lW~~t~-------~Gl~~~--~~~~~~~~~~~~~d-----Gl~~---~ 626 (781)
T 3v9f_A 572 QVFQRK----EG-LPNTHI-RAISED--KNGNIWASTN-------TGISCY--ITSKKCFYTYDHSN-----NIPQ---G 626 (781)
T ss_dssp EEECGG----GT-CSCCCC-CEEEEC--SSSCEEEECS-------SCEEEE--ETTTTEEEEECGGG-----TCCS---S
T ss_pred EEcccc----CC-CCCceE-EEEEEC--CCCCEEEEcC-------CceEEE--ECCCCceEEecccC-----Cccc---c
Confidence 764311 01 443322 344422 5788888753 233334 44433 44433211 0100 0
Q ss_pred CCc-cEEEEeeCCEEEEEeecCCeEEEEECCC
Q 018005 309 NYD-HVYCFWHQGMICVCCYTWPEILYYNVAR 339 (362)
Q Consensus 309 ~~~-~~~~~~~~~~i~~~~~~~~~v~~yd~~~ 339 (362)
... ...+...++.|++.. ...+..||+++
T Consensus 627 ~f~~~~~~~~~~G~l~~g~--~~Gl~~f~p~~ 656 (781)
T 3v9f_A 627 SFISGCVTKDHNGLIYFGS--INGLCFFNPDI 656 (781)
T ss_dssp CEEEEEEEECTTSCEEEEE--TTEEEEECSCC
T ss_pred ccccCceEECCCCEEEEEC--CCceEEEChhh
Confidence 011 111223456778865 45688888765
No 94
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=86.90 E-value=15 Score=36.12 Aligned_cols=203 Identities=6% Similarity=-0.003 Sum_probs=94.1
Q ss_pred ceEEEecCCCCeEEEEeCCcCceeeccCCC-CCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCcccccc-cCC
Q 018005 111 GLLCFSLPSSSSFLVCNLVTLSSRTIDFPT-YPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFD-IDG 188 (362)
Q Consensus 111 Gll~~~~~~~~~~~v~NP~t~~w~~lP~~~-~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~-~~~ 188 (362)
|-.++.+..++.+.+||..++++..+.... .......+.+.+... ...++.++ ....+.+||..++.-.... ...
T Consensus 67 ~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~-~~~l~sgs--~dg~I~vwdl~~~~~~~~~~~~~ 143 (753)
T 3jro_A 67 GTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEY-GPLLLVAS--SDGKVSVVEFKENGTTSPIIIDA 143 (753)
T ss_dssp CSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGG-CSEEEEEE--TTSEEEEEECCSSSCCCCEEEEC
T ss_pred CCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCC-CCEEEEEe--CCCcEEEEEeecCCCcceeEeec
Confidence 533333334688999999998765443322 122233444443310 12334343 3468899998775221111 001
Q ss_pred CCccccccCCCcccEEE---------------CCEEEEEecCCcEEEEEEcCCC--eeecCC-CCCcccccCCCCccccc
Q 018005 189 FPSMILSQSSHQEGVFY---------------KGSLYFTTPEPFSIVRFDLENG--IWETPN-DANDHMTMMLPHELTFF 250 (362)
Q Consensus 189 ~p~~~~~~~~~~~~v~~---------------~G~ly~~~~~~~~i~~~D~~~~--~w~~~~-~p~~~~~~~~p~~~~~~ 250 (362)
.+ .....+.. +|...+.++....|..||+.+. .+.... ... ......
T Consensus 144 ~~-------~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~------h~~~V~-- 208 (753)
T 3jro_A 144 HA-------IGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEG------HSDWVR-- 208 (753)
T ss_dssp CS-------SCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECC------CSSCEE--
T ss_pred CC-------CceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecC------CCCcEE--
Confidence 11 01111111 2455555555557888988654 222211 000 111111
Q ss_pred ceeecccCC---CeEEEEEEeecCCccceEEEEEECCCCC-EEEEecccHHHHHHhhhccccCCccEEEEeeCCEEEEEe
Q 018005 251 RLVNDGEES---NKLYLIGGVGRNGISTTMKLWELGCGGN-WIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCC 326 (362)
Q Consensus 251 ~lv~~~~~~---G~L~vv~~~~~~~~~~~i~vw~l~~~~~-W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 326 (362)
.+... -+ |++++.++. ...+.+|.+..... +...... ... ......-.++..++..++.+
T Consensus 209 ~l~~s--p~~~~~~~l~s~s~-----Dg~I~iwd~~~~~~~~~~~~~~-------~~~--~~~~v~~l~~spdg~~l~s~ 272 (753)
T 3jro_A 209 DVAWS--PTVLLRSYLASVSQ-----DRTCIIWTQDNEQGPWKKTLLK-------EEK--FPDVLWRASWSLSGNVLALS 272 (753)
T ss_dssp EEEEC--CCCSSSEEEEEEES-----SSCEEEEEESSSSSCCBCCBSS-------SSC--CSSCCCCEEECTTTCCEEEE
T ss_pred EEEec--cCCCCCCEEEEEec-----CCEEEEecCCCCCCcceeEEec-------cCC--CCCceEEEEEcCCCCEEEEE
Confidence 22211 34 777777662 36799999965432 2211100 000 00001111222334444444
Q ss_pred ecCCeEEEEECCC-CceEEcCC
Q 018005 327 YTWPEILYYNVAR-RTWHWLPS 347 (362)
Q Consensus 327 ~~~~~v~~yd~~~-~~w~~~~~ 347 (362)
...+.|.+||+++ ++|.....
T Consensus 273 s~Dg~I~vwd~~~~~~~~~~~~ 294 (753)
T 3jro_A 273 GGDNKVTLWKENLEGKWEPAGE 294 (753)
T ss_dssp CSSSCEECCBCCSSSCCBCCCC
T ss_pred cCCCEEEEEecCCCCCcccccc
Confidence 4567899999984 46665543
No 95
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=86.87 E-value=14 Score=31.59 Aligned_cols=204 Identities=11% Similarity=0.107 Sum_probs=100.5
Q ss_pred cCCceEEEecCCCCeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCceEEEEEeeec--CCCeEEEEeCCCCcccccc
Q 018005 108 SSKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKS--FPNYAFVYDSTDQSWSKFD 185 (362)
Q Consensus 108 s~~Gll~~~~~~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~--~~~~~~vy~s~~~~W~~~~ 185 (362)
+.+|-+++.....+.+.++|+.+++...+.... ......++++..+ ++++..... ....+.+||..++.-+..-
T Consensus 53 ~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~i~~~~dg---~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~ 128 (333)
T 2dg1_A 53 DRQGQLFLLDVFEGNIFKINPETKEIKRPFVSH-KANPAAIKIHKDG---RLFVCYLGDFKSTGGIFAATENGDNLQDII 128 (333)
T ss_dssp CTTSCEEEEETTTCEEEEECTTTCCEEEEEECS-SSSEEEEEECTTS---CEEEEECTTSSSCCEEEEECTTSCSCEEEE
T ss_pred CCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCC-CCCcceEEECCCC---cEEEEeCCCCCCCceEEEEeCCCCEEEEEE
Confidence 455655554434578999999999877653211 1122344444332 344433211 1247889998877654221
Q ss_pred cCCCCccccccCCCcccEEE--CCEEEEEecC------CcEEEEEEcCCCeeecCCCCCcccccCCCCcccccceeeccc
Q 018005 186 IDGFPSMILSQSSHQEGVFY--KGSLYFTTPE------PFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGE 257 (362)
Q Consensus 186 ~~~~p~~~~~~~~~~~~v~~--~G~ly~~~~~------~~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~~~lv~~~~ 257 (362)
. .... . .....+.+ +|.+|+.+.. ...+..+|+++.+...+... .. ....+...
T Consensus 129 ~-~~~~----~-~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-------~~---~~~~i~~~-- 190 (333)
T 2dg1_A 129 E-DLST----A-YCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQN-------IS---VANGIALS-- 190 (333)
T ss_dssp C-SSSS----C-CCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEE-------ES---SEEEEEEC--
T ss_pred c-cCcc----C-CcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecC-------CC---cccceEEC--
Confidence 0 1111 0 11223333 5888876543 24688898877655543101 10 01123212
Q ss_pred CCCe-EEEEEEeecCCccceEEEEEECCCCC-EEEEe-cccHHHHHHhhhccccCCccEEEEeeCCEEEEEeecCCeEEE
Q 018005 258 ESNK-LYLIGGVGRNGISTTMKLWELGCGGN-WIEVE-RVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYTWPEILY 334 (362)
Q Consensus 258 ~~G~-L~vv~~~~~~~~~~~i~vw~l~~~~~-W~~v~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~v~~ 334 (362)
-+|+ |++... ....+.+|.++..+. ..... .... .+.. .....-.++..++.+++.....+.|.+
T Consensus 191 ~dg~~l~v~~~-----~~~~i~~~d~~~~g~~~~~~~~~~~~----~~~~---~~~~~~i~~d~~G~l~v~~~~~~~v~~ 258 (333)
T 2dg1_A 191 TDEKVLWVTET-----TANRLHRIALEDDGVTIQPFGATIPY----YFTG---HEGPDSCCIDSDDNLYVAMYGQGRVLV 258 (333)
T ss_dssp TTSSEEEEEEG-----GGTEEEEEEECTTSSSEEEEEEEEEE----ECCS---SSEEEEEEEBTTCCEEEEEETTTEEEE
T ss_pred CCCCEEEEEeC-----CCCeEEEEEecCCCcCcccccceEEE----ecCC---CCCCCceEECCCCCEEEEEcCCCEEEE
Confidence 4665 666643 236788888854333 33221 1100 0000 000111223344567887655678999
Q ss_pred EECCCCceEEc
Q 018005 335 YNVARRTWHWL 345 (362)
Q Consensus 335 yd~~~~~w~~~ 345 (362)
||++.+....+
T Consensus 259 ~d~~g~~~~~~ 269 (333)
T 2dg1_A 259 FNKRGYPIGQI 269 (333)
T ss_dssp ECTTSCEEEEE
T ss_pred ECCCCCEEEEE
Confidence 99966555544
No 96
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=86.82 E-value=15 Score=31.93 Aligned_cols=240 Identities=8% Similarity=-0.040 Sum_probs=97.4
Q ss_pred eeeeeeCCCCCeEeecCCcCCCCCCceE-EEecCCceEEEecCCCCeEEEEeCCcCc-eeeccCC-CCCCccceEEEEeC
Q 018005 77 QYPLYDSTHGTWRRLSLPYSLLLPSAAT-LLSSSKGLLCFSLPSSSSFLVCNLVTLS-SRTIDFP-TYPFDFELLTLVST 153 (362)
Q Consensus 77 ~~~~~d~~~~~w~~~~~~~~~~~~~~~~-~~~s~~Gll~~~~~~~~~~~v~NP~t~~-w~~lP~~-~~~~~~~~~~~~~~ 153 (362)
.+.+||...+.|..+..-.. ...... +.-+.+|-.++.+..++.+.+||..+++ +...... ........+.+.+.
T Consensus 34 ~i~iw~~~~~~~~~~~~~~~--h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 111 (377)
T 3dwl_C 34 QVELYEQDGNGWKHARTFSD--HDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPN 111 (377)
T ss_dssp CBCEEEEETTEEEECCCBCC--CSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTT
T ss_pred EEEEEEccCCceEEEEEEec--CCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCC
Confidence 35567766655444321100 111222 2233445333333345789999999987 3322211 11222223333332
Q ss_pred CCceEEEEEeeecCCCeEEEEeCCCCc-ccccccCCCCccccccCCCcccEEE--CCEEEEEecCCcEEEEEEcCCCeee
Q 018005 154 PSGYKIFMLFAKSFPNYAFVYDSTDQS-WSKFDIDGFPSMILSQSSHQEGVFY--KGSLYFTTPEPFSIVRFDLENGIWE 230 (362)
Q Consensus 154 ~~~ykv~~~~~~~~~~~~~vy~s~~~~-W~~~~~~~~p~~~~~~~~~~~~v~~--~G~ly~~~~~~~~i~~~D~~~~~w~ 230 (362)
+ +.++.++ ....+.+||..++. |.... .+.. .. ......+.+ +|.+.+.+.....+..||+.+....
T Consensus 112 ~---~~l~~~~--~d~~i~iwd~~~~~~~~~~~--~~~~-~h--~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 181 (377)
T 3dwl_C 112 E---DKFAVGS--GARVISVCYFEQENDWWVSK--HLKR-PL--RSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVD 181 (377)
T ss_dssp S---SCCEEEE--SSSCEEECCC-----CCCCE--EECS-SC--CSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC
T ss_pred C---CEEEEEe--cCCeEEEEEECCcccceeee--Eeec-cc--CCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccC
Confidence 2 2233333 23578889887654 54433 1111 00 011122223 4665555555557889998654322
Q ss_pred cCCCCC---------cccccCCCCcccccceeecccCCCeEEEEEEeecCCccceEEEEEECCCCC-EEEEecccHHHHH
Q 018005 231 TPNDAN---------DHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGISTTMKLWELGCGGN-WIEVERVPEMMCR 300 (362)
Q Consensus 231 ~~~~p~---------~~~~~~~p~~~~~~~lv~~~~~~G~L~vv~~~~~~~~~~~i~vw~l~~~~~-W~~v~~~p~~~~~ 300 (362)
....+. ..... +.....-..+... -+|++++.+. ....+.+|++..... ...+..+.
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~s--p~~~~l~~~~-----~d~~i~iwd~~~~~~~~~~~~~~~----- 248 (377)
T 3dwl_C 182 AKPEASVWGSRLPFNTVCAE-YPSGGWVHAVGFS--PSGNALAYAG-----HDSSVTIAYPSAPEQPPRALITVK----- 248 (377)
T ss_dssp -CCCSCSSCSCCCEEEEEEC-CCCSSSEEEEEEC--TTSSCEEEEE-----TTTEEC-CEECSTTSCEEECCCEE-----
T ss_pred CCccccccccccchhhhhhc-ccCCceEEEEEEC--CCCCEEEEEe-----CCCcEEEEECCCCCCcceeeEeec-----
Confidence 211010 00000 1000001112111 4667666554 236899999964443 33333331
Q ss_pred HhhhccccCCccEEE--EeeCCEEEEEeecCCeEEEEECCCCceEEcCCCC
Q 018005 301 KFMSVCYHNYDHVYC--FWHQGMICVCCYTWPEILYYNVARRTWHWLPSCP 349 (362)
Q Consensus 301 ~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~v~~yd~~~~~w~~~~~~~ 349 (362)
.....+.+ +..++.+++.+ ..+.++.|+.....|+......
T Consensus 249 -------~~~~~v~~~~~s~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~ 291 (377)
T 3dwl_C 249 -------LSQLPLRSLLWANESAIVAAG-YNYSPILLQGNESGWAHTRDLD 291 (377)
T ss_dssp -------CSSSCEEEEEEEETTEEEEEE-SSSSEEEECCCC---CCSBCCC
T ss_pred -------CCCCceEEEEEcCCCCEEEEE-cCCcEEEEEeCCCceEEEeeec
Confidence 11112222 23455555544 4567779999887776665544
No 97
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=85.86 E-value=15 Score=31.01 Aligned_cols=181 Identities=8% Similarity=0.036 Sum_probs=86.2
Q ss_pred CCCeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCcccccccCCCCccccccCC
Q 018005 119 SSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILSQSS 198 (362)
Q Consensus 119 ~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~ 198 (362)
.++.+.+|+..+++....-.. .......+++.+.+ +.++.++ ....+.+||..++.=...-. ... .
T Consensus 43 ~dg~i~iw~~~~~~~~~~~~~-h~~~v~~~~~~~~~---~~l~s~~--~d~~i~vwd~~~~~~~~~~~-~~~-------~ 108 (312)
T 4ery_A 43 ADKLIKIWGAYDGKFEKTISG-HKLGISDVAWSSDS---NLLVSAS--DDKTLKIWDVSSGKCLKTLK-GHS-------N 108 (312)
T ss_dssp TTSCEEEEETTTCCEEEEECC-CSSCEEEEEECTTS---SEEEEEE--TTSEEEEEETTTCCEEEEEE-CCS-------S
T ss_pred CCCeEEEEeCCCcccchhhcc-CCCceEEEEEcCCC---CEEEEEC--CCCEEEEEECCCCcEEEEEc-CCC-------C
Confidence 356788899888876543221 11122334444332 3344343 34588999987754211100 000 0
Q ss_pred CcccEEE--CCEEEEEecCCcEEEEEEcCCCeeecCCCCCcccccCCCCcccccceeecccCCCeEEEEEEeecCCccce
Q 018005 199 HQEGVFY--KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGISTT 276 (362)
Q Consensus 199 ~~~~v~~--~G~ly~~~~~~~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~L~vv~~~~~~~~~~~ 276 (362)
....+.+ +|.+.+.++....+..+|+.+.+-...... ...... .+... .+|++++.+. ....
T Consensus 109 ~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~-------~~~~v~--~~~~~--~~~~~l~~~~-----~d~~ 172 (312)
T 4ery_A 109 YVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPA-------HSDPVS--AVHFN--RDGSLIVSSS-----YDGL 172 (312)
T ss_dssp CEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECC-------CSSCEE--EEEEC--TTSSEEEEEE-----TTSC
T ss_pred CEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecC-------CCCcEE--EEEEc--CCCCEEEEEe-----CCCc
Confidence 1111222 355555555555789999987543221101 111111 12211 4777777765 2367
Q ss_pred EEEEEECCCCCEEEEecccHHHHHHhhhccccCCccEE--EEeeCCEEEEEeecCCeEEEEECCCCceE
Q 018005 277 MKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVY--CFWHQGMICVCCYTWPEILYYNVARRTWH 343 (362)
Q Consensus 277 i~vw~l~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~~~~~~~v~~yd~~~~~w~ 343 (362)
+.+|++.....=..+.. .....+. .+..++..++.....+.+.+||+++.+-.
T Consensus 173 i~~wd~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 227 (312)
T 4ery_A 173 CRIWDTASGQCLKTLID--------------DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCL 227 (312)
T ss_dssp EEEEETTTCCEEEEECC--------------SSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEE
T ss_pred EEEEECCCCceeeEEec--------------cCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEE
Confidence 89998743221111100 0011122 22233334444445678899999887543
No 98
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=85.41 E-value=20 Score=32.12 Aligned_cols=187 Identities=10% Similarity=0.083 Sum_probs=94.8
Q ss_pred EecCCceEEEecCCCCeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCcccccc
Q 018005 106 LSSSKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFD 185 (362)
Q Consensus 106 ~~s~~Gll~~~~~~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~ 185 (362)
+...++++...+ .++.+.+||..+++....-.. ......++.+.. . . ++.++ ....+.+||..++.-...-
T Consensus 165 ~~~~~~~l~s~~-~dg~i~vwd~~~~~~~~~~~~-h~~~v~~~~~~~---~-~-l~s~s--~dg~i~~wd~~~~~~~~~~ 235 (445)
T 2ovr_B 165 SQMRDNIIISGS-TDRTLKVWNAETGECIHTLYG-HTSTVRCMHLHE---K-R-VVSGS--RDATLRVWDIETGQCLHVL 235 (445)
T ss_dssp EEEETTEEEEEE-TTSCEEEEETTTTEEEEEECC-CSSCEEEEEEET---T-E-EEEEE--TTSEEEEEESSSCCEEEEE
T ss_pred EEecCCEEEEEe-CCCeEEEEECCcCcEEEEECC-CCCcEEEEEecC---C-E-EEEEe--CCCEEEEEECCCCcEEEEE
Confidence 333344444433 467899999999875332111 111222333322 1 2 33333 3468899998765421111
Q ss_pred cCCCCccccccCCCcccEEECCEEEEEecCCcEEEEEEcCCCeeecCCCCCcccccCCCCcccccceeecccCCCeEEEE
Q 018005 186 IDGFPSMILSQSSHQEGVFYKGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLI 265 (362)
Q Consensus 186 ~~~~p~~~~~~~~~~~~v~~~G~ly~~~~~~~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~L~vv 265 (362)
.. .......+..+|...+.+.....+..||+.+.+-...... ... .-..+. .+|..+++
T Consensus 236 ----~~----~~~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-------~~~--~v~~~~----~~~~~l~~ 294 (445)
T 2ovr_B 236 ----MG----HVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQG-------HTN--RVYSLQ----FDGIHVVS 294 (445)
T ss_dssp ----EC----CSSCEEEEEECSSCEEEEETTSCEEEEEGGGTEEEEEECC-------CSS--CEEEEE----ECSSEEEE
T ss_pred ----cC----CcccEEEEEECCCEEEEEcCCCEEEEEECCCCcEeEEecC-------CCC--ceEEEE----ECCCEEEE
Confidence 00 0112234555787777776666899999887643221101 111 112232 57777766
Q ss_pred EEeecCCccceEEEEEECCCCCEEEEecccHHHHHHhhhccccCCccEEEE-eeCCEEEEEeecCCeEEEEECCCCceE
Q 018005 266 GGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCF-WHQGMICVCCYTWPEILYYNVARRTWH 343 (362)
Q Consensus 266 ~~~~~~~~~~~i~vw~l~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~v~~yd~~~~~w~ 343 (362)
+. ....+.+|++..... +..+. .....+.++ ..++. ++.+...+.+.+||+++++-.
T Consensus 295 ~~-----~d~~i~i~d~~~~~~---~~~~~------------~~~~~v~~~~~~~~~-l~~~~~dg~i~vwd~~~~~~~ 352 (445)
T 2ovr_B 295 GS-----LDTSIRVWDVETGNC---IHTLT------------GHQSLTSGMELKDNI-LVSGNADSTVKIWDIKTGQCL 352 (445)
T ss_dssp EE-----TTSCEEEEETTTCCE---EEEEC------------CCCSCEEEEEEETTE-EEEEETTSCEEEEETTTCCEE
T ss_pred Ee-----CCCeEEEEECCCCCE---EEEEc------------CCcccEEEEEEeCCE-EEEEeCCCeEEEEECCCCcEE
Confidence 65 237799998853322 11111 011122233 34454 444445678999999876543
No 99
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=85.41 E-value=18 Score=31.65 Aligned_cols=194 Identities=10% Similarity=0.081 Sum_probs=86.4
Q ss_pred cCCceEEEecCCCCeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCcccccccC
Q 018005 108 SSKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDID 187 (362)
Q Consensus 108 s~~Gll~~~~~~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~~~ 187 (362)
+-+|-.++.+..++.+.+||...+....+..- ......+.+.+.+ . .++ .++ ....+.+||..++.-...-
T Consensus 117 s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~--~~~v~~~~~~~~~-~-~l~-~~~--~d~~i~iwd~~~~~~~~~~-- 187 (425)
T 1r5m_A 117 SHDGNSIVTGVENGELRLWNKTGALLNVLNFH--RAPIVSVKWNKDG-T-HII-SMD--VENVTILWNVISGTVMQHF-- 187 (425)
T ss_dssp CTTSSEEEEEETTSCEEEEETTSCEEEEECCC--CSCEEEEEECTTS-S-EEE-EEE--TTCCEEEEETTTTEEEEEE--
T ss_pred cCCCCEEEEEeCCCeEEEEeCCCCeeeeccCC--CccEEEEEECCCC-C-EEE-EEe--cCCeEEEEECCCCcEEEEe--
Confidence 34553333333457899999433333433321 1222334443322 1 233 232 2457889998776542221
Q ss_pred CCCccc--------cc--cCCCcccEEE-CCEEEEEecCCcEEEEEEcCCCeeecCCCCCcccccCCCCcccccceeecc
Q 018005 188 GFPSMI--------LS--QSSHQEGVFY-KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDG 256 (362)
Q Consensus 188 ~~p~~~--------~~--~~~~~~~v~~-~G~ly~~~~~~~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~~~lv~~~ 256 (362)
...... .. ........+. ++. ++.+.....+..||+.+.+-...... .........+.
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~i~~~d~~~~~~~~~~~~-------~~~~i~~~~~~--- 256 (425)
T 1r5m_A 188 ELKETGGSSINAENHSGDGSLGVDVEWVDDDK-FVIPGPKGAIFVYQITEKTPTGKLIG-------HHGPISVLEFN--- 256 (425)
T ss_dssp CCC---------------CCCBSCCEEEETTE-EEEECGGGCEEEEETTCSSCSEEECC-------CSSCEEEEEEE---
T ss_pred eccccCccceeeccccCCcceeeEEEEcCCCE-EEEEcCCCeEEEEEcCCCceeeeecc-------CCCceEEEEEC---
Confidence 111100 00 0001222333 444 44444445799999987533211101 11111222221
Q ss_pred cCCCeEEEEEEeecCCccceEEEEEECCCCCEEEEecccHHHHHHhhhccccCCccEEE--EeeCCEEEEEeecCCeEEE
Q 018005 257 EESNKLYLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYC--FWHQGMICVCCYTWPEILY 334 (362)
Q Consensus 257 ~~~G~L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~v~~ 334 (362)
-+|++++++. ....+.+|.+.....-..+.. ....+.+ +..++ .++.....+.+.+
T Consensus 257 -~~~~~l~~~~-----~d~~i~i~d~~~~~~~~~~~~---------------~~~~i~~~~~~~~~-~l~~~~~d~~i~i 314 (425)
T 1r5m_A 257 -DTNKLLLSAS-----DDGTLRIWHGGNGNSQNCFYG---------------HSQSIVSASWVGDD-KVISCSMDGSVRL 314 (425)
T ss_dssp -TTTTEEEEEE-----TTSCEEEECSSSBSCSEEECC---------------CSSCEEEEEEETTT-EEEEEETTSEEEE
T ss_pred -CCCCEEEEEc-----CCCEEEEEECCCCccceEecC---------------CCccEEEEEECCCC-EEEEEeCCCcEEE
Confidence 4677666655 236789997753322111110 0111222 22344 4444555678888
Q ss_pred EECCCCceE
Q 018005 335 YNVARRTWH 343 (362)
Q Consensus 335 yd~~~~~w~ 343 (362)
||+++++-.
T Consensus 315 ~d~~~~~~~ 323 (425)
T 1r5m_A 315 WSLKQNTLL 323 (425)
T ss_dssp EETTTTEEE
T ss_pred EECCCCcEe
Confidence 998876543
No 100
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=85.11 E-value=7.9 Score=40.34 Aligned_cols=178 Identities=9% Similarity=0.067 Sum_probs=87.8
Q ss_pred CCCeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCcccccccCCCCccccccCC
Q 018005 119 SSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILSQSS 198 (362)
Q Consensus 119 ~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~ 198 (362)
.++.+.+||..+++....... .......+++.+.+ +.++.++ ....+.+|+..++...... .... .
T Consensus 981 ~~g~i~i~d~~~~~~~~~~~~-h~~~v~~l~~s~dg---~~l~s~~--~dg~i~vwd~~~~~~~~~~--~~~~------~ 1046 (1249)
T 3sfz_A 981 EDGAIKIIELPNNRVFSSGVG-HKKAVRHIQFTADG---KTLISSS--EDSVIQVWNWQTGDYVFLQ--AHQE------T 1046 (1249)
T ss_dssp TTSCCEEEETTTTSCEEECCC-CSSCCCCEEECSSS---SCEEEEC--SSSBEEEEETTTTEEECCB--CCSS------C
T ss_pred CCCCEEEEEcCCCceeeeccc-CCCceEEEEECCCC---CEEEEEc--CCCEEEEEECCCCceEEEe--cCCC------c
Confidence 456788999888775432221 11122344454332 2233333 3458999999887665443 2111 1
Q ss_pred CcccEEE-CCEEEEEecCCcEEEEEEcCCCeeecCCCCCcccccCCCCcccccceeecccCCCeEEEEEEeecCCccceE
Q 018005 199 HQEGVFY-KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGISTTM 277 (362)
Q Consensus 199 ~~~~v~~-~G~ly~~~~~~~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~L~vv~~~~~~~~~~~i 277 (362)
.....+. +|.+. .++....+..+|+.+.+....... .......... . -+|++++.+.. ..++
T Consensus 1047 v~~~~~~~~~~l~-~~~~dg~v~vwd~~~~~~~~~~~~-------~~~~v~~~~~--s--~d~~~l~s~s~-----d~~v 1109 (1249)
T 3sfz_A 1047 VKDFRLLQDSRLL-SWSFDGTVKVWNVITGRIERDFTC-------HQGTVLSCAI--S--SDATKFSSTSA-----DKTA 1109 (1249)
T ss_dssp EEEEEECSSSEEE-EEESSSEEEEEETTTTCCCEEEEC-------CSSCCCCEEE--C--SSSSSCEEECC-----SSCC
T ss_pred EEEEEEcCCCcEE-EEECCCcEEEEECCCCceeEEEcc-------cCCcEEEEEE--C--CCCCEEEEEcC-----CCcE
Confidence 1111222 34443 444445789999987643221000 1111112222 2 57777666552 3678
Q ss_pred EEEEECCCCCEEEEecccHHHHHHhhhccccCCccEEEE--eeCCEEEEEeecCCeEEEEECCCCce
Q 018005 278 KLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCF--WHQGMICVCCYTWPEILYYNVARRTW 342 (362)
Q Consensus 278 ~vw~l~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~v~~yd~~~~~w 342 (362)
.+|.++.... +..+. .+...+.++ ..++..++.+...+.|.+||+++++-
T Consensus 1110 ~iwd~~~~~~---~~~l~------------~h~~~v~~~~~s~dg~~lat~~~dg~i~vwd~~~~~~ 1161 (1249)
T 3sfz_A 1110 KIWSFDLLSP---LHELK------------GHNGCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQL 1161 (1249)
T ss_dssp CEECSSSSSC---SBCCC------------CCSSCEEEEEECSSSSEEEEEETTSCCCEEESSSSCC
T ss_pred EEEECCCcce---eeeec------------cCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCCCce
Confidence 8997753321 11111 111223332 33444455555567899999998754
No 101
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=84.97 E-value=21 Score=31.96 Aligned_cols=187 Identities=12% Similarity=0.059 Sum_probs=96.9
Q ss_pred CeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCcccccccCCCCccccccCCCc
Q 018005 121 SSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILSQSSHQ 200 (362)
Q Consensus 121 ~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~~ 200 (362)
..+++||..+++...+..... ....+.+.+++ -+++..........+++||..++..+... ..+. ..
T Consensus 203 ~~i~~~d~~tg~~~~l~~~~~--~~~~~~~spdg--~~la~~~~~~g~~~i~~~d~~~~~~~~l~--~~~~-------~~ 269 (415)
T 2hqs_A 203 SALVIQTLANGAVRQVASFPR--HNGAPAFSPDG--SKLAFALSKTGSLNLYVMDLASGQIRQVT--DGRS-------NN 269 (415)
T ss_dssp CEEEEEETTTCCEEEEECCSS--CEEEEEECTTS--SEEEEEECTTSSCEEEEEETTTCCEEECC--CCSS-------CE
T ss_pred cEEEEEECCCCcEEEeecCCC--cccCEEEcCCC--CEEEEEEecCCCceEEEEECCCCCEEeCc--CCCC-------cc
Confidence 589999999999876654321 22334444332 23443443334457999999887765444 2111 11
Q ss_pred ccEEE--CCE-EEEEecCC--cEEEEEEcCCCeeecCCCCCcccccCCCCcccccceeecccCCCeEEEEEEeecCCccc
Q 018005 201 EGVFY--KGS-LYFTTPEP--FSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGIST 275 (362)
Q Consensus 201 ~~v~~--~G~-ly~~~~~~--~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~L~vv~~~~~~~~~~ 275 (362)
..+.. +|. +++..... ..|..+|+.+.+-..+. . ......... + . -+|+..++.... ....
T Consensus 270 ~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~-~-------~~~~~~~~~-~-s--pdG~~l~~~~~~--~g~~ 335 (415)
T 2hqs_A 270 TEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRIT-W-------EGSQNQDAD-V-S--SDGKFMVMVSSN--GGQQ 335 (415)
T ss_dssp EEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECC-C-------SSSEEEEEE-E-C--TTSSEEEEEEEC--SSCE
T ss_pred cceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEe-c-------CCCcccCeE-E-C--CCCCEEEEEECc--CCce
Confidence 12222 565 55444322 36888898876544332 1 111111122 2 1 577766655432 1235
Q ss_pred eEEEEEECCCCCEEEEecccHHHHHHhhhccccCCccEEEEe-eCCEEEEEeecCC--eEEEEECCCCceEEcCCCC
Q 018005 276 TMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCFW-HQGMICVCCYTWP--EILYYNVARRTWHWLPSCP 349 (362)
Q Consensus 276 ~i~vw~l~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~--~v~~yd~~~~~w~~~~~~~ 349 (362)
.+.+|.++ .+....+..- .......+. ++..|++.....+ .+..+|++.+..+.++..+
T Consensus 336 ~i~~~d~~-~~~~~~l~~~--------------~~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~~l~~~~ 397 (415)
T 2hqs_A 336 HIAKQDLA-TGGVQVLSST--------------FLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATD 397 (415)
T ss_dssp EEEEEETT-TCCEEECCCS--------------SSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEECCCSS
T ss_pred EEEEEECC-CCCEEEecCC--------------CCcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCcEEEeeCCC
Confidence 67777764 3334332211 001111222 3455665554333 6899999988888876543
No 102
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=84.52 E-value=20 Score=31.27 Aligned_cols=190 Identities=10% Similarity=0.003 Sum_probs=89.0
Q ss_pred ecCCceEEEecCCCCeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCccccccc
Q 018005 107 SSSKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDI 186 (362)
Q Consensus 107 ~s~~Gll~~~~~~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~~ 186 (362)
.+-+|-.++.+..++.+.+||..+++....-.. .......+++...+.. . ++.++ ....+.+||..++.-....
T Consensus 147 ~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~-h~~~v~~v~~s~~~~~-~-~~s~~--~dg~v~~wd~~~~~~~~~~- 220 (357)
T 4g56_B 147 VFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNA-HSSEVNCVAACPGKDT-I-FLSCG--EDGRILLWDTRKPKPATRI- 220 (357)
T ss_dssp ECSSSSEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEECTTCSS-C-EEEEE--TTSCEEECCTTSSSCBCBC-
T ss_pred ECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcC-CCCCEEEEEEccCCCc-e-eeeec--cCCceEEEECCCCceeeee-
Confidence 344564444444467899999999875432211 1112223444333222 2 22222 2357889998775432221
Q ss_pred CCCCccccccCCCcccEEE---CCEEEEEecCCcEEEEEEcCCCeeec-CCCCCcccccCCCCcccccceeecccCCC-e
Q 018005 187 DGFPSMILSQSSHQEGVFY---KGSLYFTTPEPFSIVRFDLENGIWET-PNDANDHMTMMLPHELTFFRLVNDGEESN-K 261 (362)
Q Consensus 187 ~~~p~~~~~~~~~~~~v~~---~G~ly~~~~~~~~i~~~D~~~~~w~~-~~~p~~~~~~~~p~~~~~~~lv~~~~~~G-~ 261 (362)
.... .......+.+ ++.+...+.....|..||+.+.+-.. +.. ..... ..+... .+| +
T Consensus 221 -~~~~----~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~--------~~~~v--~~l~~s--p~~~~ 283 (357)
T 4g56_B 221 -DFCA----SDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAV--------HSQNI--TGLAYS--YHSSP 283 (357)
T ss_dssp -CCTT----CCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECC--------CSSCE--EEEEEC--SSSSC
T ss_pred -eecc----ccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEec--------cceeE--EEEEEc--CCCCC
Confidence 1110 0011123333 35555555555578899987653211 110 11111 122211 345 4
Q ss_pred EEEEEEeecCCccceEEEEEECCCCCEEEEecccHHHHHHhhhccccCCccEEEE-e--eCCEEEEEeecCCeEEEEECC
Q 018005 262 LYLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCF-W--HQGMICVCCYTWPEILYYNVA 338 (362)
Q Consensus 262 L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~-~--~~~~i~~~~~~~~~v~~yd~~ 338 (362)
+.+.+. ...++.||+++ .+ +.+..+. +...+.++ . .++.+++.....+.|.+||+.
T Consensus 284 ~lasgs-----~D~~i~iwd~~-~~--~~~~~~~-------------H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~ 342 (357)
T 4g56_B 284 FLASIS-----EDCTVAVLDAD-FS--EVFRDLS-------------HRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLP 342 (357)
T ss_dssp CEEEEE-----TTSCEEEECTT-SC--EEEEECC-------------CSSCEEEEEECSSSTTEEEEEETTSCEEEEECC
T ss_pred EEEEEe-----CCCEEEEEECC-CC--cEeEECC-------------CCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECC
Confidence 444443 23679999663 22 2222221 11233333 2 244455655567789999987
Q ss_pred CC
Q 018005 339 RR 340 (362)
Q Consensus 339 ~~ 340 (362)
+.
T Consensus 343 ~~ 344 (357)
T 4g56_B 343 SE 344 (357)
T ss_dssp --
T ss_pred CC
Confidence 54
No 103
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=83.94 E-value=16 Score=30.65 Aligned_cols=139 Identities=7% Similarity=-0.043 Sum_probs=62.4
Q ss_pred CCCeEEEEeCCcCceeeccCCCC---CCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCcccccccCCCCccccc
Q 018005 119 SSSSFLVCNLVTLSSRTIDFPTY---PFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILS 195 (362)
Q Consensus 119 ~~~~~~v~NP~t~~w~~lP~~~~---~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~ 195 (362)
.++.+.+||..+++-........ ......+.+.+... .++.+........+.+++..+..-.... ....
T Consensus 170 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~~~~~~~~~~~i~lwd~~~~~~~~~~--~~~~---- 241 (318)
T 4ggc_A 170 NDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQS--NVLATGGGTSDRHIRIWNVCSGACLSAV--DAHS---- 241 (318)
T ss_dssp TTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTST--TEEEEEECTTTCEEEEEETTTCCEEEEE--ECSS----
T ss_pred cCcceeEEECCCCcccccceeeecccCCceEEEEecCCCC--cEEEEEecCCCCEEEEEecccccccccc--ccee----
Confidence 34678899988876322111110 11111222222222 2333333334457888888765433222 1000
Q ss_pred cCCCcccEEE-CC-EEEEEec-CCcEEEEEEcCCCeee-cCCCCCcccccCCCCcccccceeecccCCCeEEEEEEeecC
Q 018005 196 QSSHQEGVFY-KG-SLYFTTP-EPFSIVRFDLENGIWE-TPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRN 271 (362)
Q Consensus 196 ~~~~~~~v~~-~G-~ly~~~~-~~~~i~~~D~~~~~w~-~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~L~vv~~~~~~ 271 (362)
......+. ++ .+....+ ....|..||..+.+-. .+.. ...... .+..- -+|++++.++
T Consensus 242 --~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~g--------H~~~V~--~l~~s--pdg~~l~S~s---- 303 (318)
T 4ggc_A 242 --QVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKG--------HTSRVL--SLTMS--PDGATVASAA---- 303 (318)
T ss_dssp --CEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECC--------CSSCEE--EEEEC--TTSSCEEEEE----
T ss_pred --eeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcC--------CCCCEE--EEEEc--CCCCEEEEEe----
Confidence 00111122 23 3333332 3457889998865332 2211 111111 22211 4777766665
Q ss_pred CccceEEEEEECC
Q 018005 272 GISTTMKLWELGC 284 (362)
Q Consensus 272 ~~~~~i~vw~l~~ 284 (362)
...++.||++.+
T Consensus 304 -~D~~v~iWd~~~ 315 (318)
T 4ggc_A 304 -ADETLRLWRCFE 315 (318)
T ss_dssp -TTTEEEEECCSC
T ss_pred -cCCeEEEEECCC
Confidence 237899998753
No 104
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=83.91 E-value=19 Score=30.57 Aligned_cols=144 Identities=8% Similarity=-0.039 Sum_probs=71.0
Q ss_pred EEEecCCCCeEEEEeC-CcCceeeccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCc-------cccc
Q 018005 113 LCFSLPSSSSFLVCNL-VTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQS-------WSKF 184 (362)
Q Consensus 113 l~~~~~~~~~~~v~NP-~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~-------W~~~ 184 (362)
.++.+..++.+.+||. .+++...+...........+.+.+ .. .++ .++ ....+.+||..+.. .+..
T Consensus 71 ~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~--~~-~l~-s~~--~d~~i~iwd~~~~~~~~~~~~~~~~ 144 (342)
T 1yfq_A 71 QIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYG--DD-KLI-AAS--WDGLIEVIDPRNYGDGVIAVKNLNS 144 (342)
T ss_dssp EEEEEETTSCEEEECSSSSSSEEECBSCCCCSCEEEEEEET--TT-EEE-EEE--TTSEEEEECHHHHTTBCEEEEESCS
T ss_pred EEEEEcCCCeEEEEEeccCCceEeccccCCCCceEEEEeCC--CC-EEE-EEc--CCCeEEEEcccccccccccccCCee
Confidence 3333334678999999 888876665421222233444444 22 233 333 34578888875400 1111
Q ss_pred ccCCCCccccccCCCcccEEECCEEEEEecCCcEEEEEEcCC-Ce--eecCCCCCcccccCCCCcccccceeecccC-CC
Q 018005 185 DIDGFPSMILSQSSHQEGVFYKGSLYFTTPEPFSIVRFDLEN-GI--WETPNDANDHMTMMLPHELTFFRLVNDGEE-SN 260 (362)
Q Consensus 185 ~~~~~p~~~~~~~~~~~~v~~~G~ly~~~~~~~~i~~~D~~~-~~--w~~~~~p~~~~~~~~p~~~~~~~lv~~~~~-~G 260 (362)
. .+.. ......+.+++.-.+.+.....+..||+.+ .. ......+ ..... ..+... - +|
T Consensus 145 ~--~~~~-----~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~-------~~~~i--~~i~~~--~~~~ 206 (342)
T 1yfq_A 145 N--NTKV-----KNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESG-------LKYQI--RDVALL--PKEQ 206 (342)
T ss_dssp S--SSSS-----CCCEEEEEECSSEEEEEESTTEEEEEESSCCTTCCCEEEECS-------CSSCE--EEEEEC--SGGG
T ss_pred e--EEee-----CCceEEEEecCCcEEEEeCCCeEEEEECCccccccceeeecC-------CCCce--eEEEEC--CCCC
Confidence 1 1110 011223333322233444445799999987 32 2221111 12211 222211 3 67
Q ss_pred eEEEEEEeecCCccceEEEEEECCC
Q 018005 261 KLYLIGGVGRNGISTTMKLWELGCG 285 (362)
Q Consensus 261 ~L~vv~~~~~~~~~~~i~vw~l~~~ 285 (362)
++++++. ....+.+|.++..
T Consensus 207 ~~l~~~~-----~dg~i~i~~~~~~ 226 (342)
T 1yfq_A 207 EGYACSS-----IDGRVAVEFFDDQ 226 (342)
T ss_dssp CEEEEEE-----TTSEEEEEECCTT
T ss_pred CEEEEEe-----cCCcEEEEEEcCC
Confidence 7777766 2478999999765
No 105
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=83.68 E-value=24 Score=31.63 Aligned_cols=217 Identities=7% Similarity=-0.027 Sum_probs=104.6
Q ss_pred EEecCCceEEEecCCCCeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCc-ccc
Q 018005 105 LLSSSKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQS-WSK 183 (362)
Q Consensus 105 ~~~s~~Gll~~~~~~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~-W~~ 183 (362)
+....+|-|++.......+.++|+.+++...+...... ..++++..+. .+++.... ....+.+++..++. .+.
T Consensus 136 la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~---~~ia~~~~g~--~l~~~d~~-~~~~I~~~d~~~~~~~~~ 209 (409)
T 3hrp_A 136 IAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKG---GKPAVTKDKQ--RVYSIGWE-GTHTVYVYMKASGWAPTR 209 (409)
T ss_dssp EEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCB---CBCEECTTSS--EEEEEBSS-TTCEEEEEEGGGTTCEEE
T ss_pred EEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCC---CceeEecCCC--cEEEEecC-CCceEEEEEcCCCceeEE
Confidence 33446676776665567899999999887665433111 1144543322 44443322 22278888876532 122
Q ss_pred cccCCCCccccccCCCcccEEE---CCEEEEEecCCcEEEEEEcCCCeeecCCCCCcccccCCCCcccc-c-ceeecccC
Q 018005 184 FDIDGFPSMILSQSSHQEGVFY---KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTF-F-RLVNDGEE 258 (362)
Q Consensus 184 ~~~~~~p~~~~~~~~~~~~v~~---~G~ly~~~~~~~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~-~-~lv~~~~~ 258 (362)
.. ..+. .. . ....++.+ +|.+|+... ...|..||+.+.....+.... ........ . .+... -.
T Consensus 210 ~g--~~~~-~~-~-~~p~~iav~p~~g~lyv~d~-~~~I~~~d~~~~~~~~~~~~~-----~~g~~~~~P~~~ia~~-p~ 277 (409)
T 3hrp_A 210 IG--QLGS-TF-S-GKIGAVALDETEEWLYFVDS-NKNFGRFNVKTQEVTLIKQLE-----LSGSLGTNPGPYLIYY-FV 277 (409)
T ss_dssp EE--ECCT-TS-C-SCCCBCEECTTSSEEEEECT-TCEEEEEETTTCCEEEEEECC-----CCSCCCCSSCCEEEEE-TT
T ss_pred ee--eccc-hh-c-CCcEEEEEeCCCCeEEEEEC-CCcEEEEECCCCCEEEEeccc-----ccCCCCCCccccEEEe-CC
Confidence 21 0000 00 0 11223333 589998543 447999999876544431000 01111111 1 34321 02
Q ss_pred CCeEEEEEEeecCCccceEEEEEECCCCCEEEEeccc-HHHHHHhhhc-cccCCccEEEEeeCCEEEEEee-cCCeEEEE
Q 018005 259 SNKLYLIGGVGRNGISTTMKLWELGCGGNWIEVERVP-EMMCRKFMSV-CYHNYDHVYCFWHQGMICVCCY-TWPEILYY 335 (362)
Q Consensus 259 ~G~L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~~p-~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~-~~~~v~~y 335 (362)
+|.||+... .... |++++.++.-..+..-+ ..-..+-... .......-.++..++.||+... ....|..+
T Consensus 278 ~g~lyv~d~-----~~~~--I~~~~~~g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~ 350 (409)
T 3hrp_A 278 DSNFYMSDQ-----NLSS--VYKITPDGECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKL 350 (409)
T ss_dssp TTEEEEEET-----TTTE--EEEECTTCCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEE
T ss_pred CCEEEEEeC-----CCCE--EEEEecCCCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEE
Confidence 688998864 2244 44445555422221110 0000000000 0000111123333456899887 77789999
Q ss_pred ECCCCceEEcC
Q 018005 336 NVARRTWHWLP 346 (362)
Q Consensus 336 d~~~~~w~~~~ 346 (362)
|+.+++...+.
T Consensus 351 ~~~~G~v~~~~ 361 (409)
T 3hrp_A 351 DILDGYVSTVA 361 (409)
T ss_dssp ETTTTEEEEEE
T ss_pred ECCCCEEEEEe
Confidence 98888777653
No 106
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=83.50 E-value=24 Score=31.34 Aligned_cols=108 Identities=13% Similarity=0.002 Sum_probs=57.6
Q ss_pred CceEEEecCCCCeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCceEEEEEeeec-----CCCeEEEEeCCCCccccc
Q 018005 110 KGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKS-----FPNYAFVYDSTDQSWSKF 184 (362)
Q Consensus 110 ~Gll~~~~~~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~-----~~~~~~vy~s~~~~W~~~ 184 (362)
+..+++.+..++.+.+||+.+++....-... .....+++.+.+. .++...... ....+.+||..+++-...
T Consensus 223 ~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~--~~~~~~~~~~~g~--~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~ 298 (433)
T 3bws_A 223 RDLVYCSNWISEDISVIDRKTKLEIRKTDKI--GLPRGLLLSKDGK--ELYIAQFSASNQESGGGRLGIYSMDKEKLIDT 298 (433)
T ss_dssp TTEEEEEETTTTEEEEEETTTTEEEEECCCC--SEEEEEEECTTSS--EEEEEEEESCTTCSCCEEEEEEETTTTEEEEE
T ss_pred CCEEEEEecCCCcEEEEECCCCcEEEEecCC--CCceEEEEcCCCC--EEEEEECCCCccccCCCeEEEEECCCCcEEee
Confidence 3456555544678999999998865433221 1122333433322 333333221 234889999987643221
Q ss_pred ccCCCCccccccCCCcccEEE--CC-EEEEEecCCcEEEEEEcCCCeee
Q 018005 185 DIDGFPSMILSQSSHQEGVFY--KG-SLYFTTPEPFSIVRFDLENGIWE 230 (362)
Q Consensus 185 ~~~~~p~~~~~~~~~~~~v~~--~G-~ly~~~~~~~~i~~~D~~~~~w~ 230 (362)
. ..+. ....+.+ +| .+|+.+.....+..||+.+.+-.
T Consensus 299 ~--~~~~-------~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~ 338 (433)
T 3bws_A 299 I--GPPG-------NKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQ 338 (433)
T ss_dssp E--EEEE-------CEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEE
T ss_pred c--cCCC-------CcceEEECCCCCEEEEEecCCCEEEEEECCCCcEE
Confidence 1 0010 1112333 45 57777666668999999876543
No 107
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=83.36 E-value=23 Score=31.09 Aligned_cols=196 Identities=15% Similarity=0.099 Sum_probs=87.8
Q ss_pred ceEEEecCCCCeEEEEeCCcCc------eeeccC-C-CCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCccc
Q 018005 111 GLLCFSLPSSSSFLVCNLVTLS------SRTIDF-P-TYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWS 182 (362)
Q Consensus 111 Gll~~~~~~~~~~~v~NP~t~~------w~~lP~-~-~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~ 182 (362)
|-+++.+..++.+.+||..+++ ...... . ........+.+.+.+. .+++.++ ....+.+||..++.-.
T Consensus 126 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~l~~~~--~dg~v~iwd~~~~~~~ 201 (416)
T 2pm9_A 126 DNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLA--HVFASAG--SSNFASIWDLKAKKEV 201 (416)
T ss_dssp TTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCT--TEEEEES--SSSCEEEEETTTTEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCC--cEEEEEc--CCCCEEEEECCCCCcc
Confidence 4333333346789999999886 221111 1 1111223444543322 2333333 2457899999876532
Q ss_pred ccccCCCCccccccCCCcccEEE--CC-EEEEEecCCc---EEEEEEcCCCeeecCCCCCcccccCCC--Ccccccceee
Q 018005 183 KFDIDGFPSMILSQSSHQEGVFY--KG-SLYFTTPEPF---SIVRFDLENGIWETPNDANDHMTMMLP--HELTFFRLVN 254 (362)
Q Consensus 183 ~~~~~~~p~~~~~~~~~~~~v~~--~G-~ly~~~~~~~---~i~~~D~~~~~w~~~~~p~~~~~~~~p--~~~~~~~lv~ 254 (362)
..- ...............+.+ +| .+.+.+.... .+..||+.+..-.... +. ....-..+..
T Consensus 202 ~~~--~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~---------~~~~~~~~v~~~~~ 270 (416)
T 2pm9_A 202 IHL--SYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQT---------LNQGHQKGILSLDW 270 (416)
T ss_dssp EEE--CCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBC---------CCSCCSSCEEEEEE
T ss_pred eEE--eccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEE---------eecCccCceeEEEe
Confidence 221 111000000111222333 23 3555554443 6888998864211100 11 1111122221
Q ss_pred cccC-CCeEEEEEEeecCCccceEEEEEECCCCCEEEEecccHHHHHHhhhccccCCccEEEEeeCC-EEEEEeecCCeE
Q 018005 255 DGEE-SNKLYLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQG-MICVCCYTWPEI 332 (362)
Q Consensus 255 ~~~~-~G~L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~v 332 (362)
. - +|++++.+.. ...+.+|+++... .+..+.. .. ..... ..+..++ .+++.....+.+
T Consensus 271 s--~~~~~~l~s~~~-----dg~v~~wd~~~~~---~~~~~~~------~~---~~v~~-~~~s~~~~~~l~s~~~d~~i 330 (416)
T 2pm9_A 271 C--HQDEHLLLSSGR-----DNTVLLWNPESAE---QLSQFPA------RG---NWCFK-TKFAPEAPDLFACASFDNKI 330 (416)
T ss_dssp C--SSCSSCEEEEES-----SSEEEEECSSSCC---EEEEEEC------SS---SCCCC-EEECTTCTTEEEECCSSSEE
T ss_pred C--CCCCCeEEEEeC-----CCCEEEeeCCCCc---cceeecC------CC---CceEE-EEECCCCCCEEEEEecCCcE
Confidence 1 2 6777777662 3679999774322 2222210 00 00011 1222223 455555556778
Q ss_pred EEEECCCCc
Q 018005 333 LYYNVARRT 341 (362)
Q Consensus 333 ~~yd~~~~~ 341 (362)
.+||+++.+
T Consensus 331 ~iw~~~~~~ 339 (416)
T 2pm9_A 331 EVQTLQNLT 339 (416)
T ss_dssp EEEESCCCC
T ss_pred EEEEccCCC
Confidence 999988754
No 108
>2kwv_A RAD30 homolog B, DNA polymerase IOTA; ubiquitin-binding motif, UBM, TL protein binding-signaling protein complex; HET: DNA; NMR {Mus musculus}
Probab=83.29 E-value=1.1 Score=26.06 Aligned_cols=25 Identities=24% Similarity=0.482 Sum_probs=21.3
Q ss_pred CCCCChhhhcCCCHHHHHHHHccCC
Q 018005 5 RREMDPAIWSRLPEDLLDHVLSFLP 29 (362)
Q Consensus 5 ~~~~~~~~~~~LP~dll~~IL~rLp 29 (362)
++..|++....||.|+.+|||+.-.
T Consensus 13 P~~VD~eVF~~LP~dIQ~Ells~~~ 37 (48)
T 2kwv_A 13 PEGVDQEVFKQLPADIQEEILSGKS 37 (48)
T ss_dssp CTTCCGGGTTTSCHHHHHHHTTCCC
T ss_pred CCCCCHHHHHHCcHHHHHHHHhcch
Confidence 4458999999999999999998654
No 109
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=83.26 E-value=19 Score=30.13 Aligned_cols=191 Identities=11% Similarity=0.008 Sum_probs=94.8
Q ss_pred EEEecCCCCeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCcccccccCCCCcc
Q 018005 113 LCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSM 192 (362)
Q Consensus 113 l~~~~~~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~ 192 (362)
+++.....+.+..+||.++ ...+.... ....+++++..+ ++++... ....+.+||..++..+... ....
T Consensus 42 l~~~~~~~~~i~~~~~~~~-~~~~~~~~--~~~~~l~~~~dg---~l~v~~~--~~~~i~~~d~~~g~~~~~~--~~~~- 110 (296)
T 3e5z_A 42 VIFSDVRQNRTWAWSDDGQ-LSPEMHPS--HHQNGHCLNKQG---HLIACSH--GLRRLERQREPGGEWESIA--DSFE- 110 (296)
T ss_dssp EEEEEGGGTEEEEEETTSC-EEEEESSC--SSEEEEEECTTC---CEEEEET--TTTEEEEECSTTCCEEEEE--CEET-
T ss_pred EEEEeCCCCEEEEEECCCC-eEEEECCC--CCcceeeECCCC---cEEEEec--CCCeEEEEcCCCCcEEEEe--eccC-
Confidence 3333333568889999988 55554321 112234444332 3444322 2357899999888766543 1111
Q ss_pred ccccCCCcccEEE--CCEEEEEe----c-------------CCcEEEEEEcCCCeeecCCCCCcccccCCCCccccccee
Q 018005 193 ILSQSSHQEGVFY--KGSLYFTT----P-------------EPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLV 253 (362)
Q Consensus 193 ~~~~~~~~~~v~~--~G~ly~~~----~-------------~~~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~~~lv 253 (362)
.... .....+.+ +|.+|+.. . ....|..||+. .+...+.... ..| ..+.
T Consensus 111 ~~~~-~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~-----~~~-----~gi~ 178 (296)
T 3e5z_A 111 GKKL-NSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDR-----VKP-----NGLA 178 (296)
T ss_dssp TEEC-CCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCC-----SSE-----EEEE
T ss_pred CCCC-CCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCC-----CCC-----ccEE
Confidence 0100 11223444 68888752 1 12368888887 4444322110 011 1232
Q ss_pred ecccCCCeEEEEEEeecCCccceEEEEEECCCCCE-EEEecccHHHHHHhhhccccCCccEEEEeeCCEEEEEeecCCeE
Q 018005 254 NDGEESNKLYLIGGVGRNGISTTMKLWELGCGGNW-IEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYTWPEI 332 (362)
Q Consensus 254 ~~~~~~G~L~vv~~~~~~~~~~~i~vw~l~~~~~W-~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~v 332 (362)
.. -+|+++ +.. .....+.+|.++..++. .....+. . . .....-.++..++.|++.. .+.|
T Consensus 179 ~s--~dg~~l-v~~----~~~~~i~~~~~~~~g~~~~~~~~~~--~----~----~~~p~~i~~d~~G~l~v~~--~~~v 239 (296)
T 3e5z_A 179 FL--PSGNLL-VSD----TGDNATHRYCLNARGETEYQGVHFT--V----E----PGKTDGLRVDAGGLIWASA--GDGV 239 (296)
T ss_dssp EC--TTSCEE-EEE----TTTTEEEEEEECSSSCEEEEEEEEC--C----S----SSCCCSEEEBTTSCEEEEE--TTEE
T ss_pred EC--CCCCEE-EEe----CCCCeEEEEEECCCCcCcCCCeEee--C----C----CCCCCeEEECCCCCEEEEc--CCeE
Confidence 12 578776 443 23467888888644555 2221110 0 0 0011112334455677765 5678
Q ss_pred EEEECCCCceEEc
Q 018005 333 LYYNVARRTWHWL 345 (362)
Q Consensus 333 ~~yd~~~~~w~~~ 345 (362)
.+||++.+....+
T Consensus 240 ~~~~~~g~~~~~~ 252 (296)
T 3e5z_A 240 HVLTPDGDELGRV 252 (296)
T ss_dssp EEECTTSCEEEEE
T ss_pred EEECCCCCEEEEE
Confidence 8999886655544
No 110
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=82.70 E-value=24 Score=30.85 Aligned_cols=190 Identities=11% Similarity=-0.015 Sum_probs=101.7
Q ss_pred cCCceEEEecCCCCeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCcccccccC
Q 018005 108 SSKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDID 187 (362)
Q Consensus 108 s~~Gll~~~~~~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~~~ 187 (362)
..+|.|++.....+.+..+++.++....+...... .-.+++++... -.++.... ....+++++.....-+...
T Consensus 82 ~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~-~p~glavd~~~--g~ly~~d~--~~~~I~~~~~dG~~~~~l~-- 154 (349)
T 3v64_C 82 HRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLE-SPGGLAVDWVH--DKLYWTDS--GTSRIEVANLDGAHRKVLL-- 154 (349)
T ss_dssp TTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCS-CCCEEEEETTT--TEEEEEET--TTTEEEEEETTSCSCEEEE--
T ss_pred ccccEEEEEeccCCceEEEecCCCCceEEEeCCCC-CccEEEEecCC--CeEEEEcC--CCCeEEEEcCCCCceEEEE--
Confidence 46777887765567899999988765544322111 11355565322 25665443 3357888887654322221
Q ss_pred CCCccccccCCCcccEEE---CCEEEEEecCC-cEEEEEEcCCCeeecCCCCCcccccCCCCccc-ccceeecccCCCeE
Q 018005 188 GFPSMILSQSSHQEGVFY---KGSLYFTTPEP-FSIVRFDLENGIWETPNDANDHMTMMLPHELT-FFRLVNDGEESNKL 262 (362)
Q Consensus 188 ~~p~~~~~~~~~~~~v~~---~G~ly~~~~~~-~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~-~~~lv~~~~~~G~L 262 (362)
. . .+ ....++.+ +|.+||..... ..|..+|++...-..+. ..... -..|... -.+|+|
T Consensus 155 ~--~-~l---~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~----------~~~~~~PnGla~d-~~~~~l 217 (349)
T 3v64_C 155 W--Q-SL---EKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIA----------DTHLFWPNGLTID-YAGRRM 217 (349)
T ss_dssp C--T-TC---SCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESC----------CSSCSCEEEEEEE-TTTTEE
T ss_pred e--C-CC---CCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEE----------ECCCCCcceEEEe-CCCCEE
Confidence 0 0 01 12334444 58999998665 68999998764333321 11111 1223321 037889
Q ss_pred EEEEEeecCCccceEEEEEECCCCCEEEEecccHHHHHHhhhccccCCccEEEEeeCCEEEEEeecCCeEEEEECCCC
Q 018005 263 YLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYTWPEILYYNVARR 340 (362)
Q Consensus 263 ~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~v~~yd~~~~ 340 (362)
|++.. ....|..+.++.... +.+.... + . .+......++.||+.....+.|..+|..++
T Consensus 218 Y~aD~-----~~~~I~~~~~dG~~~-~~~~~~~-------~-----~-~P~giav~~~~ly~td~~~~~V~~~~~~~G 276 (349)
T 3v64_C 218 YWVDA-----KHHVIERANLDGSHR-KAVISQG-------L-----P-HPFAITVFEDSLYWTDWHTKSINSANKFTG 276 (349)
T ss_dssp EEEET-----TTTEEEEEETTSCSC-EEEECSS-------C-----S-SEEEEEEETTEEEEEETTTTEEEEEETTTC
T ss_pred EEEEC-----CCCEEEEEeCCCCce-EEEEeCC-------C-----C-CceEEEEECCEEEEecCCCCeEEEEEccCC
Confidence 99865 346677776642222 2221110 0 0 112222256788888777778888885544
No 111
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=81.40 E-value=29 Score=30.86 Aligned_cols=191 Identities=11% Similarity=0.027 Sum_probs=99.5
Q ss_pred cCCceEEEecCCCCeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCcccccccC
Q 018005 108 SSKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDID 187 (362)
Q Consensus 108 s~~Gll~~~~~~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~~~ 187 (362)
..+|.|++.....+.+..+++.++....+...... .-.+++++... -.+++... ....+++++.....-+...
T Consensus 125 ~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~-~p~glavd~~~--g~lY~~d~--~~~~I~~~~~dg~~~~~l~-- 197 (386)
T 3v65_B 125 HRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLE-SPGGLAVDWVH--DKLYWTDS--GTSRIEVANLDGAHRKVLL-- 197 (386)
T ss_dssp TTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCS-CCCCEEEETTT--TEEEEEET--TTTEEEECBTTSCSCEEEE--
T ss_pred cCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCC-CccEEEEEeCC--CeEEEEcC--CCCeEEEEeCCCCceEEee--
Confidence 35677877765567899999988775554322111 11345555322 25665443 2347778777543322221
Q ss_pred CCCccccccCCCcccEEE---CCEEEEEecCC-cEEEEEEcCCCeeecCCCCCcccccCCCCcccccceeecccCCCeEE
Q 018005 188 GFPSMILSQSSHQEGVFY---KGSLYFTTPEP-FSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLY 263 (362)
Q Consensus 188 ~~p~~~~~~~~~~~~v~~---~G~ly~~~~~~-~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~L~ 263 (362)
. . .+ ....++.+ +|.+||..... ..|..+|++...-..+.... ...|. .|... ..+|+||
T Consensus 198 ~--~-~l---~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~----~~~Pn-----Glavd-~~~~~lY 261 (386)
T 3v65_B 198 W--Q-SL---EKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTH----LFWPN-----GLTID-YAGRRMY 261 (386)
T ss_dssp C--S-SC---SCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSS----CSCEE-----EEEEE-GGGTEEE
T ss_pred c--C-CC---CCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECC----CCCee-----eEEEe-CCCCEEE
Confidence 0 0 01 12334444 58999997655 68999998754332221010 00122 23320 0378899
Q ss_pred EEEEeecCCccceEEEEEECCCCCEEEEecccHHHHHHhhhccccCCccEEEEeeCCEEEEEeecCCeEEEEECCCC
Q 018005 264 LIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYTWPEILYYNVARR 340 (362)
Q Consensus 264 vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~v~~yd~~~~ 340 (362)
++.. ....|.++.++....-+.+.. . + ..+......++.||+.......|..+|..++
T Consensus 262 ~aD~-----~~~~I~~~d~dG~~~~~~~~~-~-------~------~~P~giav~~~~ly~td~~~~~V~~~~~~~G 319 (386)
T 3v65_B 262 WVDA-----KHHVIERANLDGSHRKAVISQ-G-------L------PHPFAITVFEDSLYWTDWHTKSINSANKFTG 319 (386)
T ss_dssp EEET-----TTTEEEEECTTSCSCEEEECS-S-------C------SSEEEEEEETTEEEEEETTTTEEEEEETTTC
T ss_pred EEEC-----CCCEEEEEeCCCCeeEEEEEC-C-------C------CCceEEEEECCEEEEeeCCCCeEEEEECCCC
Confidence 9865 235566664432221222211 0 0 0112222356788888777778889985544
No 112
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=80.93 E-value=26 Score=30.07 Aligned_cols=237 Identities=8% Similarity=-0.034 Sum_probs=108.1
Q ss_pred ceeeeeeCCCCCeEeec-CCcCCCCCCceE-EEecCCc-eEEEecCCCCeEEEEeCCcCceeeccCC-CCCCccceEEEE
Q 018005 76 DQYPLYDSTHGTWRRLS-LPYSLLLPSAAT-LLSSSKG-LLCFSLPSSSSFLVCNLVTLSSRTIDFP-TYPFDFELLTLV 151 (362)
Q Consensus 76 ~~~~~~d~~~~~w~~~~-~~~~~~~~~~~~-~~~s~~G-ll~~~~~~~~~~~v~NP~t~~w~~lP~~-~~~~~~~~~~~~ 151 (362)
..+.+||...+.+..+. +. . ...... +.-+-+| +++... .++.+.+||..++++...... ........+.+.
T Consensus 30 ~~v~i~~~~~~~~~~~~~~~-~--h~~~v~~~~~~~~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~ 105 (372)
T 1k8k_C 30 HEVHIYEKSGNKWVQVHELK-E--HNGQVTGVDWAPDSNRIVTCG-TDRNAYVWTLKGRTWKPTLVILRINRAARCVRWA 105 (372)
T ss_dssp SEEEEEEEETTEEEEEEEEE-C--CSSCEEEEEEETTTTEEEEEE-TTSCEEEEEEETTEEEEEEECCCCSSCEEEEEEC
T ss_pred CEEEEEeCCCCcEEeeeeec-C--CCCcccEEEEeCCCCEEEEEc-CCCeEEEEECCCCeeeeeEEeecCCCceeEEEEC
Confidence 34667777666533322 11 0 111222 2223344 444333 457899999999886543322 222223344444
Q ss_pred eCCCceEEEEEeeecCCCeEEEEeCCCCc-ccccccCCCCccccccCCCcccEEE--CCEEEEEecCCcEEEEEEcCCCe
Q 018005 152 STPSGYKIFMLFAKSFPNYAFVYDSTDQS-WSKFDIDGFPSMILSQSSHQEGVFY--KGSLYFTTPEPFSIVRFDLENGI 228 (362)
Q Consensus 152 ~~~~~ykv~~~~~~~~~~~~~vy~s~~~~-W~~~~~~~~p~~~~~~~~~~~~v~~--~G~ly~~~~~~~~i~~~D~~~~~ 228 (362)
+.+ +.+++++ ....+.+||..++. |.... .... .. ......+.+ +|...+.+.....+..||+....
T Consensus 106 ~~~---~~l~~~~--~d~~v~i~d~~~~~~~~~~~--~~~~-~~--~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~ 175 (372)
T 1k8k_C 106 PNE---KKFAVGS--GSRVISICYFEQENDWWVCK--HIKK-PI--RSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKE 175 (372)
T ss_dssp TTS---SEEEEEE--TTSSEEEEEEETTTTEEEEE--EECT-TC--CSCEEEEEECTTSSEEEEEETTSCEEEEECCCTT
T ss_pred CCC---CEEEEEe--CCCEEEEEEecCCCcceeee--eeec-cc--CCCeeEEEEcCCCCEEEEEcCCCCEEEEEccccc
Confidence 332 2333333 23567787776543 32222 1100 00 011122222 56665566555578899965321
Q ss_pred eecCC--------CC-CcccccCCC-CcccccceeecccCCCeEEEEEEeecCCccceEEEEEECCCCCEEEEecccHHH
Q 018005 229 WETPN--------DA-NDHMTMMLP-HELTFFRLVNDGEESNKLYLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMM 298 (362)
Q Consensus 229 w~~~~--------~p-~~~~~~~~p-~~~~~~~lv~~~~~~G~L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~~p~~~ 298 (362)
-.... .+ ...... +. ....-..+... -+|++++.+. ....+.+|++..... +..+.
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~--~~~~~l~~~~-----~d~~i~i~d~~~~~~---~~~~~--- 241 (372)
T 1k8k_C 176 VEERPAPTPWGSKMPFGELMFE-SSSSCGWVHGVCFS--ANGSRVAWVS-----HDSTVCLADADKKMA---VATLA--- 241 (372)
T ss_dssp TSCCCCCBTTBSCCCTTCEEEE-CCCCSSCEEEEEEC--SSSSEEEEEE-----TTTEEEEEEGGGTTE---EEEEE---
T ss_pred ccccccccccccccchhhheEe-cCCCCCeEEEEEEC--CCCCEEEEEe-----CCCEEEEEECCCCce---eEEEc---
Confidence 11000 00 000000 11 00011122211 4666666655 236799998853321 11111
Q ss_pred HHHhhhccccCCccEE--EEeeCCEEEEEeecCCeEEEEECCC--CceEEcCCCCC
Q 018005 299 CRKFMSVCYHNYDHVY--CFWHQGMICVCCYTWPEILYYNVAR--RTWHWLPSCPS 350 (362)
Q Consensus 299 ~~~~~~~~~~~~~~~~--~~~~~~~i~~~~~~~~~v~~yd~~~--~~w~~~~~~~~ 350 (362)
.....+. ++..++.+++.+ ..+.+.+||+++ ++|..+...+.
T Consensus 242 ---------~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~ 287 (372)
T 1k8k_C 242 ---------SETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDV 287 (372)
T ss_dssp ---------CSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCC
T ss_pred ---------cCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCc
Confidence 0111222 223455555544 667899999999 99988866654
No 113
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=79.61 E-value=26 Score=29.32 Aligned_cols=186 Identities=12% Similarity=0.074 Sum_probs=88.9
Q ss_pred CCeEEEEeCCcCceeeccCCC---CCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCccccc-ccCCCCccccc
Q 018005 120 SSSFLVCNLVTLSSRTIDFPT---YPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKF-DIDGFPSMILS 195 (362)
Q Consensus 120 ~~~~~v~NP~t~~w~~lP~~~---~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~-~~~~~p~~~~~ 195 (362)
.+.+.++|+.+++...+..+. .......+.++.. .-++++... ...+.+||.. ++.+.. . .... ...
T Consensus 45 ~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~--~g~l~v~~~---~~~l~~~d~~-g~~~~~~~--~~~~-~~~ 115 (314)
T 1pjx_A 45 AGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRD--ANQLFVADM---RLGLLVVQTD-GTFEEIAK--KDSE-GRR 115 (314)
T ss_dssp CCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSS--SSEEEEEET---TTEEEEEETT-SCEEECCS--BCTT-SCB
T ss_pred CCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecC--CCcEEEEEC---CCCEEEEeCC-CCEEEEEe--ccCC-Ccc
Confidence 467899999999887654310 0011123333322 124554432 2378889988 665544 2 1111 010
Q ss_pred cCCCcccEEE--CCEEEEEecCC---------------cEEEEEEcCCCeeecCCCCCcccccCCCCcccccceee---c
Q 018005 196 QSSHQEGVFY--KGSLYFTTPEP---------------FSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVN---D 255 (362)
Q Consensus 196 ~~~~~~~v~~--~G~ly~~~~~~---------------~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~~~lv~---~ 255 (362)
. .....+.+ +|.+|+.+... ..+..||++ .+...+.... -.|. .+.. +
T Consensus 116 ~-~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~-----~~~~-----~i~~~~~~ 183 (314)
T 1pjx_A 116 M-QGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAF-----QFPN-----GIAVRHMN 183 (314)
T ss_dssp C-BCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEE-----SSEE-----EEEEEECT
T ss_pred c-cCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCC-----CCcc-----eEEEeccc
Confidence 0 12234444 68888765432 468888887 4444321010 0121 1221 0
Q ss_pred ccCCC-eEEEEEEeecCCccceEEEEEECCCCCEEEE---ecccHHHHHHhhhccccCCccEEEEeeCCEEEEEeecCCe
Q 018005 256 GEESN-KLYLIGGVGRNGISTTMKLWELGCGGNWIEV---ERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYTWPE 331 (362)
Q Consensus 256 ~~~~G-~L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v---~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 331 (362)
. -+| .|++... ....+.+|.++..+..... ..++.. .. ....-.++..++.+++.....+.
T Consensus 184 d-~dg~~l~v~~~-----~~~~i~~~~~~~~g~~~~~~~~~~~~~~----~~-----~~p~~i~~d~~G~l~v~~~~~~~ 248 (314)
T 1pjx_A 184 D-GRPYQLIVAET-----PTKKLWSYDIKGPAKIENKKVWGHIPGT----HE-----GGADGMDFDEDNNLLVANWGSSH 248 (314)
T ss_dssp T-SCEEEEEEEET-----TTTEEEEEEEEETTEEEEEEEEEECCCC----SS-----CEEEEEEEBTTCCEEEEEETTTE
T ss_pred C-CCCCEEEEEEC-----CCCeEEEEECCCCCccccceEEEECCCC----CC-----CCCCceEECCCCCEEEEEcCCCE
Confidence 0 134 3566543 2366777776533333221 222100 00 00111223345678887656678
Q ss_pred EEEEECCCCc
Q 018005 332 ILYYNVARRT 341 (362)
Q Consensus 332 v~~yd~~~~~ 341 (362)
|..||+++++
T Consensus 249 i~~~d~~~g~ 258 (314)
T 1pjx_A 249 IEVFGPDGGQ 258 (314)
T ss_dssp EEEECTTCBS
T ss_pred EEEEcCCCCc
Confidence 9999998543
No 114
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=79.59 E-value=28 Score=29.65 Aligned_cols=104 Identities=6% Similarity=-0.078 Sum_probs=52.3
Q ss_pred ceEEEecCCCCeEEEEeCCc-CceeeccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCcccccccCCC
Q 018005 111 GLLCFSLPSSSSFLVCNLVT-LSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGF 189 (362)
Q Consensus 111 Gll~~~~~~~~~~~v~NP~t-~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~~~~~ 189 (362)
|-.++.+..++.+.+||..+ ++-..............+.+.+.+ +.++.++ ....+.+||..++.-.... ..
T Consensus 54 g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~---~~l~s~~--~dg~v~iwd~~~~~~~~~~--~~ 126 (368)
T 3mmy_A 54 GNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDG---SKVFTAS--CDKTAKMWDLSSNQAIQIA--QH 126 (368)
T ss_dssp SEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTS---SEEEEEE--TTSEEEEEETTTTEEEEEE--EC
T ss_pred ceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCC---CEEEEEc--CCCcEEEEEcCCCCceeec--cc
Confidence 44333443467899999987 332211111111222334443322 2233333 3458999999877643332 11
Q ss_pred CccccccCCCcccEEE----CCEEEEEecCCcEEEEEEcCCCe
Q 018005 190 PSMILSQSSHQEGVFY----KGSLYFTTPEPFSIVRFDLENGI 228 (362)
Q Consensus 190 p~~~~~~~~~~~~v~~----~G~ly~~~~~~~~i~~~D~~~~~ 228 (362)
. .....+.+ +|.+.+.++....+..||+.+.+
T Consensus 127 ~-------~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 162 (368)
T 3mmy_A 127 D-------APVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSN 162 (368)
T ss_dssp S-------SCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSS
T ss_pred c-------CceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCc
Confidence 1 11222332 46656566655689999987653
No 115
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=78.95 E-value=29 Score=29.53 Aligned_cols=66 Identities=9% Similarity=-0.067 Sum_probs=35.1
Q ss_pred CceEEEecCCCCeEEEEeCCcCceeeccC--CCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCc
Q 018005 110 KGLLCFSLPSSSSFLVCNLVTLSSRTIDF--PTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQS 180 (362)
Q Consensus 110 ~Gll~~~~~~~~~~~v~NP~t~~w~~lP~--~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~ 180 (362)
+|-+++.+..++.+.+||..+++....-. .........+.+.+.+ +.++.++ ....+.+||..++.
T Consensus 127 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~--~dg~i~i~d~~~~~ 194 (366)
T 3k26_A 127 DPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLG---EKIMSCG--MDHSLKLWRINSKR 194 (366)
T ss_dssp CTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTS---SEEEEEE--TTSCEEEEESCSHH
T ss_pred CCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCC---CEEEEec--CCCCEEEEECCCCc
Confidence 45333344346789999999887544321 1112222334444322 2233333 24578999988653
No 116
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=78.84 E-value=31 Score=29.72 Aligned_cols=188 Identities=16% Similarity=0.046 Sum_probs=96.3
Q ss_pred CCceEEEecCCCCeEEEEeCCcCce---eeccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCcccccc
Q 018005 109 SKGLLCFSLPSSSSFLVCNLVTLSS---RTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFD 185 (362)
Q Consensus 109 ~~Gll~~~~~~~~~~~v~NP~t~~w---~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~ 185 (362)
.+|.|+......+.+..+++.++.. ....... ...+++++... -.++.... ....+++++.....=+...
T Consensus 45 ~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~---~p~glavd~~~--g~ly~~d~--~~~~I~~~~~dG~~~~~l~ 117 (318)
T 3sov_A 45 SHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLL---SPDGLACDWLG--EKLYWTDS--ETNRIEVSNLDGSLRKVLF 117 (318)
T ss_dssp GGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCS---CCCEEEEETTT--TEEEEEET--TTTEEEEEETTSCSCEEEE
T ss_pred CCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCC---CccEEEEEcCC--CeEEEEEC--CCCEEEEEECCCCcEEEEE
Confidence 3566776665567788888876631 1111111 12345555322 25665433 3457888887653222221
Q ss_pred cCCCCccccccCCCcccEEE---CCEEEEEec-CCcEEEEEEcCCCeeecC-CCCCcccccCCCCcccccceeecccCCC
Q 018005 186 IDGFPSMILSQSSHQEGVFY---KGSLYFTTP-EPFSIVRFDLENGIWETP-NDANDHMTMMLPHELTFFRLVNDGEESN 260 (362)
Q Consensus 186 ~~~~p~~~~~~~~~~~~v~~---~G~ly~~~~-~~~~i~~~D~~~~~w~~~-~~p~~~~~~~~p~~~~~~~lv~~~~~~G 260 (362)
. . .+ ....++.+ +|.+||... ....|..+|++...-..+ .... ..|. .|... ..+|
T Consensus 118 --~--~-~~---~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l-----~~Pn-----glavd-~~~~ 178 (318)
T 3sov_A 118 --W--Q-EL---DQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEI-----YWPN-----GLTLD-YEEQ 178 (318)
T ss_dssp --C--S-SC---SSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSC-----SCEE-----EEEEE-TTTT
T ss_pred --e--C-CC---CCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCC-----CCcc-----EEEEe-ccCC
Confidence 0 0 01 12345555 489999974 346899999875322221 1010 0222 23321 0378
Q ss_pred eEEEEEEeecCCccceEEEEEECCCCCEEEEecccHHHHHHhhhccccCCccEEEEeeCCEEEEEeecCCeEEEEECCCC
Q 018005 261 KLYLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYTWPEILYYNVARR 340 (362)
Q Consensus 261 ~L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~v~~yd~~~~ 340 (362)
+||++.. ....|..+.++. ..-+.+..- .+ ..+......++.+|......+.|..+|+.++
T Consensus 179 ~lY~aD~-----~~~~I~~~d~dG-~~~~~~~~~-------~~------~~P~glav~~~~lywtd~~~~~V~~~~~~~G 239 (318)
T 3sov_A 179 KLYWADA-----KLNFIHKSNLDG-TNRQAVVKG-------SL------PHPFALTLFEDILYWTDWSTHSILACNKYTG 239 (318)
T ss_dssp EEEEEET-----TTTEEEEEETTS-CSCEEEECS-------CC------SCEEEEEEETTEEEEEETTTTEEEEEETTTC
T ss_pred EEEEEEC-----CCCEEEEEcCCC-CceEEEecC-------CC------CCceEEEEeCCEEEEEecCCCeEEEEECCCC
Confidence 8999865 346667666642 222222210 00 1122222356778888766778999998765
Q ss_pred c
Q 018005 341 T 341 (362)
Q Consensus 341 ~ 341 (362)
+
T Consensus 240 ~ 240 (318)
T 3sov_A 240 E 240 (318)
T ss_dssp C
T ss_pred C
Confidence 4
No 117
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=78.54 E-value=28 Score=29.03 Aligned_cols=66 Identities=11% Similarity=0.006 Sum_probs=38.5
Q ss_pred cCCceEEEecCCCCeEEEEeCCcCceeeccCCC-CCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCc
Q 018005 108 SSKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPT-YPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQS 180 (362)
Q Consensus 108 s~~Gll~~~~~~~~~~~v~NP~t~~w~~lP~~~-~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~ 180 (362)
|.+|+|-+.. ++.+.+||..|++...+-... ......++++.+.+ +.++.++ ....+.+|+.++++
T Consensus 34 S~~~~lAvg~--D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~---~~l~sgs--~Dg~v~iw~~~~~~ 100 (318)
T 4ggc_A 34 SSGNVLAVAL--DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEG---NYLAVGT--SSAEVQLWDVQQQK 100 (318)
T ss_dssp CTTSEEEEEE--TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTS---SEEEEEE--TTSEEEEEETTTTE
T ss_pred CCCCEEEEEe--CCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCC---CEEEEEE--CCCcEEEeecCCce
Confidence 4566554433 578999999999876543222 12223344554332 2344444 34688999988764
No 118
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=78.51 E-value=28 Score=29.05 Aligned_cols=216 Identities=10% Similarity=0.004 Sum_probs=108.9
Q ss_pred eeeeeeCCCCCeEeecCCcCCCCCCceEEEecCCceEEEecCCCCeEEEEeCCcCceeeccCCCCC---CccceEEEEeC
Q 018005 77 QYPLYDSTHGTWRRLSLPYSLLLPSAATLLSSSKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYP---FDFELLTLVST 153 (362)
Q Consensus 77 ~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~~s~~Gll~~~~~~~~~~~v~NP~t~~w~~lP~~~~~---~~~~~~~~~~~ 153 (362)
.+..||+..+ ...+..+ ......+..+.+|-+++.......+.++|+.+++...+...... .....+++++.
T Consensus 51 ~i~~~~~~~~-~~~~~~~----~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~ 125 (296)
T 3e5z_A 51 RTWAWSDDGQ-LSPEMHP----SHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPD 125 (296)
T ss_dssp EEEEEETTSC-EEEEESS----CSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTT
T ss_pred EEEEEECCCC-eEEEECC----CCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCC
Confidence 5667888766 4444322 11222233445665555443347899999999997766432111 11123445443
Q ss_pred CCceEEEEEe----ee-----------cCCCeEEEEeCCCCcccccccCCCCccccccCCCcccEEE--CCEEEEEecCC
Q 018005 154 PSGYKIFMLF----AK-----------SFPNYAFVYDSTDQSWSKFDIDGFPSMILSQSSHQEGVFY--KGSLYFTTPEP 216 (362)
Q Consensus 154 ~~~ykv~~~~----~~-----------~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~~~~v~~--~G~ly~~~~~~ 216 (362)
+ ++++.. .. .....+..|+.. +.-+.... .. ....++.+ +|.+++.....
T Consensus 126 G---~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~-~~--------~~~~gi~~s~dg~~lv~~~~~ 192 (296)
T 3e5z_A 126 G---SLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIR-DR--------VKPNGLAFLPSGNLLVSDTGD 192 (296)
T ss_dssp S---CEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEEC-CC--------SSEEEEEECTTSCEEEEETTT
T ss_pred C---CEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeec-CC--------CCCccEEECCCCCEEEEeCCC
Confidence 3 344431 10 012367777776 44333220 10 12234444 57776555555
Q ss_pred cEEEEEEcC-CCee-e--cCCCCCcccccCCCCcccccceeecccCCCeEEEEEEeecCCccceEEEEEECCCCCEEEEe
Q 018005 217 FSIVRFDLE-NGIW-E--TPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGISTTMKLWELGCGGNWIEVE 292 (362)
Q Consensus 217 ~~i~~~D~~-~~~w-~--~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~ 292 (362)
..|.+||+. +.+. . .+.... .-.|. .+... .+|.|++... ..+.+| +.++.-...-
T Consensus 193 ~~i~~~~~~~~g~~~~~~~~~~~~----~~~p~-----~i~~d--~~G~l~v~~~-------~~v~~~--~~~g~~~~~~ 252 (296)
T 3e5z_A 193 NATHRYCLNARGETEYQGVHFTVE----PGKTD-----GLRVD--AGGLIWASAG-------DGVHVL--TPDGDELGRV 252 (296)
T ss_dssp TEEEEEEECSSSCEEEEEEEECCS----SSCCC-----SEEEB--TTSCEEEEET-------TEEEEE--CTTSCEEEEE
T ss_pred CeEEEEEECCCCcCcCCCeEeeCC----CCCCC-----eEEEC--CCCCEEEEcC-------CeEEEE--CCCCCEEEEE
Confidence 689999986 4444 1 111000 00222 23323 6899988862 456666 4445533222
Q ss_pred cccHHHHHHhhhccccCCccEEEEe--eCCEEEEEeecCCeEEEEECCCCceEEc
Q 018005 293 RVPEMMCRKFMSVCYHNYDHVYCFW--HQGMICVCCYTWPEILYYNVARRTWHWL 345 (362)
Q Consensus 293 ~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~v~~yd~~~~~w~~~ 345 (362)
..+. . ..-.+++ .++.||+.. .+.++.+++++++.++.
T Consensus 253 ~~~~------------~-~~~~~f~~~d~~~L~v~t--~~~l~~~~~~~~~~~~~ 292 (296)
T 3e5z_A 253 LTPQ------------T-TSNLCFGGPEGRTLYMTV--STEFWSIETNVRGLEHH 292 (296)
T ss_dssp ECSS------------C-CCEEEEESTTSCEEEEEE--TTEEEEEECSCCBCCC-
T ss_pred ECCC------------C-ceeEEEECCCCCEEEEEc--CCeEEEEEccccccccc
Confidence 2221 1 1112333 234788875 46899999999877653
No 119
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=78.31 E-value=29 Score=29.10 Aligned_cols=33 Identities=9% Similarity=0.254 Sum_probs=23.0
Q ss_pred CCCeEEEEEEeecCCccceEEEEEECCCCCEEEEeccc
Q 018005 258 ESNKLYLIGGVGRNGISTTMKLWELGCGGNWIEVERVP 295 (362)
Q Consensus 258 ~~G~L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~~p 295 (362)
-+|++++.++ ....+.+|+++..+.|..+..+.
T Consensus 316 ~~~~~l~s~~-----~dg~v~iw~~~~~~~~~~~~~~~ 348 (351)
T 3f3f_A 316 LTGTILSSAG-----DDGKVRLWKATYSNEFKCMSVIT 348 (351)
T ss_dssp SSSCCEEEEE-----TTSCEEEEEECTTSCEEEEEEEC
T ss_pred CCCCEEEEec-----CCCcEEEEecCcCcchhheeehc
Confidence 3566555554 23689999997656699888775
No 120
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=78.28 E-value=31 Score=29.39 Aligned_cols=197 Identities=13% Similarity=0.067 Sum_probs=98.7
Q ss_pred CceEEEecCCCCeEEEEeCCcCceeeccCCCC--CC-ccceEEEEe-CCCceEEEEEeeec---------------CCCe
Q 018005 110 KGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTY--PF-DFELLTLVS-TPSGYKIFMLFAKS---------------FPNY 170 (362)
Q Consensus 110 ~Gll~~~~~~~~~~~v~NP~t~~w~~lP~~~~--~~-~~~~~~~~~-~~~~ykv~~~~~~~---------------~~~~ 170 (362)
+|-|++... ...+.++|+.+++...+..... +. ....++++. .+ .+++..... ....
T Consensus 91 ~g~l~v~d~-~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G---~l~v~d~~~~~~~~~~~~~~~~~~~~g~ 166 (322)
T 2fp8_A 91 NNQLYIVDC-YYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTG---IVYFTDVSTLYDDRGVQQIMDTSDKTGR 166 (322)
T ss_dssp TTEEEEEET-TTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTC---CEEEEESCSSCCTTCHHHHHHHTCCCEE
T ss_pred CCcEEEEEC-CCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCC---EEEEECCcccccccccceehcccCCCce
Confidence 565555532 2458889998887655532111 11 112333433 32 455443210 1246
Q ss_pred EEEEeCCCCcccccccCCCCccccccCCCcccEEE--CCE-EEEEecCCcEEEEEEcCCC---eeecCCCCCcccccCCC
Q 018005 171 AFVYDSTDQSWSKFDIDGFPSMILSQSSHQEGVFY--KGS-LYFTTPEPFSIVRFDLENG---IWETPNDANDHMTMMLP 244 (362)
Q Consensus 171 ~~vy~s~~~~W~~~~~~~~p~~~~~~~~~~~~v~~--~G~-ly~~~~~~~~i~~~D~~~~---~w~~~~~p~~~~~~~~p 244 (362)
+.+||..++..+... . .+ ....++.+ +|. +|+.......|.+||+..+ ..+.+. . ++
T Consensus 167 v~~~d~~~~~~~~~~--~----~~---~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~-~-------~~ 229 (322)
T 2fp8_A 167 LIKYDPSTKETTLLL--K----EL---HVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLV-K-------IP 229 (322)
T ss_dssp EEEEETTTTEEEEEE--E----EE---SCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEE-E-------CS
T ss_pred EEEEeCCCCEEEEec--c----CC---ccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEE-e-------CC
Confidence 888998777654432 0 11 12345555 354 7877655568999998753 222211 0 22
Q ss_pred CcccccceeecccCCCeEEEEEEeecCCc---cceEEEEEECCCCCEEEEecccHHHHHHhhhccccCCccEEEEeeCCE
Q 018005 245 HELTFFRLVNDGEESNKLYLIGGVGRNGI---STTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGM 321 (362)
Q Consensus 245 ~~~~~~~lv~~~~~~G~L~vv~~~~~~~~---~~~i~vw~l~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (362)
. -..+... .+|.|++......... ...-.|++++.+++-...-..|... .+ . ....++..++.
T Consensus 230 g---P~gi~~d--~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~g~---~~-----~-~~~~~~~~~g~ 295 (322)
T 2fp8_A 230 N---PGNIKRN--ADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPPF---AG-----E-HFEQIQEHDGL 295 (322)
T ss_dssp S---EEEEEEC--TTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCTTT---TT-----S-CCCEEEEETTE
T ss_pred C---CCCeEEC--CCCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEECCCCC---cc-----c-cceEEEEeCCE
Confidence 1 1123323 6789999876311000 1234577777776643333333210 00 0 11122335788
Q ss_pred EEEEeecCCeEEEEECCCCc
Q 018005 322 ICVCCYTWPEILYYNVARRT 341 (362)
Q Consensus 322 i~~~~~~~~~v~~yd~~~~~ 341 (362)
||+.....+.|..|+++.+.
T Consensus 296 L~v~~~~~~~i~~~~~~~~~ 315 (322)
T 2fp8_A 296 LYIGTLFHGSVGILVYDKKG 315 (322)
T ss_dssp EEEECSSCSEEEEEEC----
T ss_pred EEEeecCCCceEEEeccccc
Confidence 99987677889999987653
No 121
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=78.05 E-value=21 Score=32.41 Aligned_cols=116 Identities=9% Similarity=0.071 Sum_probs=63.1
Q ss_pred cccEEEC----CEEEEEecCCcEEEEEEcCCCeeecCCCCCcccccCCCCcccccceeecccCCCe-EEEEEEeecCCcc
Q 018005 200 QEGVFYK----GSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNK-LYLIGGVGRNGIS 274 (362)
Q Consensus 200 ~~~v~~~----G~ly~~~~~~~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~-L~vv~~~~~~~~~ 274 (362)
...+.++ |.||+.... ..|..||++++....+... . ..-..+... .+|+ ||+...... .
T Consensus 139 P~~lavdp~~~g~Lyv~d~~-~~I~~id~~~~~v~~~~~~-------~---~~P~~ia~d--~~G~~lyvad~~~~---~ 202 (430)
T 3tc9_A 139 AVWLSFDPKNHNHLYLVGEQ-HPTRLIDFEKEYVSTVYSG-------L---SKVRTICWT--HEADSMIITNDQNN---N 202 (430)
T ss_dssp CCEEEEETTEEEEEEEEEBT-EEEEEEETTTTEEEEEECC-------C---SCEEEEEEC--TTSSEEEEEECCSC---T
T ss_pred CCEEEECCCCCCeEEEEeCC-CcEEEEECCCCEEEEEecC-------C---CCcceEEEe--CCCCEEEEEeCCCC---c
Confidence 3445544 899998776 6899999998877654211 1 111223322 4566 888865321 1
Q ss_pred ceEEEEEECCCCCEEEEecccHHHHHHhhhccccCCccEEEEee-CCEEEEEeecCCeEEEEECCCCce
Q 018005 275 TTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCFWH-QGMICVCCYTWPEILYYNVARRTW 342 (362)
Q Consensus 275 ~~i~vw~l~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~v~~yd~~~~~w 342 (362)
....+..++..+.+.....++ .+ ....-.++.. ++.||+.....+.|..||++++..
T Consensus 203 ~~~~v~~~~~~g~~~~~~~l~-----~~------~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~ 260 (430)
T 3tc9_A 203 DRPNNYILTRESGFKVITELT-----KG------QNCNGAETHPINGELYFNSWNAGQVFRYDFTTQET 260 (430)
T ss_dssp TSEEEEEEEGGGTSCSEEEEE-----EC------SSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEE
T ss_pred ccceEEEEeCCCceeeeeeec-----cC------CCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcE
Confidence 222333344444443211221 00 1111123333 577898877777899999998765
No 122
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=77.96 E-value=28 Score=28.77 Aligned_cols=190 Identities=10% Similarity=0.131 Sum_probs=95.0
Q ss_pred cCCceEEEecCC-CCeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCccccccc
Q 018005 108 SSKGLLCFSLPS-SSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDI 186 (362)
Q Consensus 108 s~~Gll~~~~~~-~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~~ 186 (362)
..+|-+++.... ...+.++|+..+....+..... .....++++..+ ++++... ....+.+|+.....-....
T Consensus 86 ~~~g~l~v~~~~~~~~i~~~d~~g~~~~~~~~~~~-~~~~~i~~~~~g---~l~v~~~--~~~~i~~~~~~g~~~~~~~- 158 (286)
T 1q7f_A 86 RNSGDIIVTERSPTHQIQIYNQYGQFVRKFGATIL-QHPRGVTVDNKG---RIIVVEC--KVMRVIIFDQNGNVLHKFG- 158 (286)
T ss_dssp TTTTEEEEEECGGGCEEEEECTTSCEEEEECTTTC-SCEEEEEECTTS---CEEEEET--TTTEEEEECTTSCEEEEEE-
T ss_pred cCCCeEEEEcCCCCCEEEEECCCCcEEEEecCccC-CCceEEEEeCCC---CEEEEEC--CCCEEEEEcCCCCEEEEeC-
Confidence 456766665532 5789999965444444432211 112244444332 3554332 3457888987554333322
Q ss_pred CCCCccccccCCCcccEEE--CCEEEEEecCCcEEEEEEcCCCeeecCCCCCcccccCCCCcc-cccceeecccCCCeEE
Q 018005 187 DGFPSMILSQSSHQEGVFY--KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHEL-TFFRLVNDGEESNKLY 263 (362)
Q Consensus 187 ~~~p~~~~~~~~~~~~v~~--~G~ly~~~~~~~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~-~~~~lv~~~~~~G~L~ 263 (362)
. +. ......++.+ +|.+|+.......|..||+..+....+..+ ... .-..+... .+|.|+
T Consensus 159 -~-~~----~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~---------g~~~~p~~i~~d--~~G~l~ 221 (286)
T 1q7f_A 159 -C-SK----HLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGE---------GITNYPIGVGIN--SNGEIL 221 (286)
T ss_dssp -C-TT----TCSSEEEEEECSSSEEEEEEGGGTEEEEEETTCCEEEEESCT---------TTSCSEEEEEEC--TTCCEE
T ss_pred -C-CC----ccCCcEEEEECCCCCEEEEECCCCEEEEEcCCCCEEEEEccC---------CccCCCcEEEEC--CCCCEE
Confidence 0 00 0012334555 489888766556899999976654443211 101 11223322 578999
Q ss_pred EEEEeecCCccc-eEEEEEECCCCCEEEEecccHHHHHHhhhccccCCccEEEEeeCCEEEEEeecCCeEEEEECCC
Q 018005 264 LIGGVGRNGIST-TMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYTWPEILYYNVAR 339 (362)
Q Consensus 264 vv~~~~~~~~~~-~i~vw~l~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~v~~yd~~~ 339 (362)
+.... .. .+.+|. .++.-....... .. .....-.++..++.+|+.. ..+.|.+|+...
T Consensus 222 v~~~~-----~~~~i~~~~--~~g~~~~~~~~~-------~~---~~~~~~i~~~~~g~l~vs~-~~~~v~v~~~~~ 280 (286)
T 1q7f_A 222 IADNH-----NNFNLTIFT--QDGQLISALESK-------VK---HAQCFDVALMDDGSVVLAS-KDYRLYIYRYVQ 280 (286)
T ss_dssp EEECS-----SSCEEEEEC--TTSCEEEEEEES-------SC---CSCEEEEEEETTTEEEEEE-TTTEEEEEECSC
T ss_pred EEeCC-----CCEEEEEEC--CCCCEEEEEccc-------CC---CCcceeEEECCCCcEEEEC-CCCeEEEEEccc
Confidence 88752 23 778884 444421111110 00 0001112334456788875 456788888755
No 123
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=77.24 E-value=36 Score=29.55 Aligned_cols=97 Identities=9% Similarity=-0.023 Sum_probs=49.4
Q ss_pred CCCeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCcccccccCCCCccccccCC
Q 018005 119 SSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILSQSS 198 (362)
Q Consensus 119 ~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~ 198 (362)
.++.+.+||..+++....-... .....+.+...+....+++.++ ....+.+||..++.-...- .. ...
T Consensus 120 ~d~~i~iwd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~d~~~~~~~~~~----~~----~~~ 187 (408)
T 4a11_B 120 FDKTLKVWDTNTLQTADVFNFE--ETVYSHHMSPVSTKHCLVAVGT--RGPKVQLCDLKSGSCSHIL----QG----HRQ 187 (408)
T ss_dssp TTSEEEEEETTTTEEEEEEECS--SCEEEEEECSSCSSCCEEEEEE--SSSSEEEEESSSSCCCEEE----CC----CCS
T ss_pred CCCeEEEeeCCCCccceeccCC--CceeeeEeecCCCCCcEEEEEc--CCCeEEEEeCCCcceeeee----cC----CCC
Confidence 4678999999998865443221 1222333433333333444444 2357889998765321111 00 001
Q ss_pred CcccEEE--CCE-EEEEecCCcEEEEEEcCCC
Q 018005 199 HQEGVFY--KGS-LYFTTPEPFSIVRFDLENG 227 (362)
Q Consensus 199 ~~~~v~~--~G~-ly~~~~~~~~i~~~D~~~~ 227 (362)
....+.+ +|. +.+.+.....+..||+.+.
T Consensus 188 ~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~ 219 (408)
T 4a11_B 188 EILAVSWSPRYDYILATASADSRVKLWDVRRA 219 (408)
T ss_dssp CEEEEEECSSCTTEEEEEETTSCEEEEETTCS
T ss_pred cEEEEEECCCCCcEEEEEcCCCcEEEEECCCC
Confidence 1122222 343 4545555557889998754
No 124
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=77.19 E-value=33 Score=29.10 Aligned_cols=34 Identities=18% Similarity=0.549 Sum_probs=24.9
Q ss_pred CCCeEEEEEEeecCCccceEEEEEECCCCCEEEEecccH
Q 018005 258 ESNKLYLIGGVGRNGISTTMKLWELGCGGNWIEVERVPE 296 (362)
Q Consensus 258 ~~G~L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~~p~ 296 (362)
-+|++++.++. ..++.+|+.+..+.|..+.++..
T Consensus 272 p~g~~las~~~-----D~~v~lw~~~~~g~~~~~~~~~~ 305 (316)
T 3bg1_A 272 ITANILAVSGG-----DNKVTLWKESVDGQWVCISDVNK 305 (316)
T ss_dssp TTTCCEEEEES-----SSCEEEEEECTTSCEEEEEECC-
T ss_pred CCCCEEEEEcC-----CCeEEEEEECCCCcEEEeeeccC
Confidence 46777666652 37899999976677999988853
No 125
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=77.00 E-value=39 Score=31.57 Aligned_cols=104 Identities=12% Similarity=-0.085 Sum_probs=58.0
Q ss_pred eEEEecCCCCeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCceEEEEEeee-cCCCeEEEEeCCCCcccccccCCCC
Q 018005 112 LLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAK-SFPNYAFVYDSTDQSWSKFDIDGFP 190 (362)
Q Consensus 112 ll~~~~~~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~-~~~~~~~vy~s~~~~W~~~~~~~~p 190 (362)
+++.... .+...+||..|++...+...+. ....+++++. .++..... .....++++|..++..+... ..+
T Consensus 124 ~~~~s~~-~~~~~l~d~~~g~~~~l~~~~~----~~~~~spDG~--~la~~~~~~~~~~~i~~~d~~~g~~~~l~--~~~ 194 (582)
T 3o4h_A 124 VVFTGAT-EDRVALYALDGGGLRELARLPG----FGFVSDIRGD--LIAGLGFFGGGRVSLFTSNLSSGGLRVFD--SGE 194 (582)
T ss_dssp EEEEEEC-SSCEEEEEEETTEEEEEEEESS----CEEEEEEETT--EEEEEEEEETTEEEEEEEETTTCCCEEEC--CSS
T ss_pred EEEEecC-CCCceEEEccCCcEEEeecCCC----ceEEECCCCC--EEEEEEEcCCCCeEEEEEcCCCCCceEee--cCC
Confidence 5555443 3455699999998777653322 3444554432 33323222 22347899999998887665 222
Q ss_pred ccccccCCCcccEEE-CCEEEEEecCC--cEEEEEEcCCCeee
Q 018005 191 SMILSQSSHQEGVFY-KGSLYFTTPEP--FSIVRFDLENGIWE 230 (362)
Q Consensus 191 ~~~~~~~~~~~~v~~-~G~ly~~~~~~--~~i~~~D~~~~~w~ 230 (362)
. .....++. +|+..+..... ..|..+|+++.+..
T Consensus 195 ~------~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 195 G------SFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE 231 (582)
T ss_dssp C------EEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE
T ss_pred C------ccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE
Confidence 1 01112222 56654444333 37899999887666
No 126
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=76.53 E-value=50 Score=30.88 Aligned_cols=213 Identities=10% Similarity=0.001 Sum_probs=96.6
Q ss_pred ceEEEecCCCCeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCcccccccCCCC
Q 018005 111 GLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFP 190 (362)
Q Consensus 111 Gll~~~~~~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p 190 (362)
+.+++....++.+.++|..+.+-..+...+.......+++++.++ |. ++... ....+.++|..+++=... ++
T Consensus 292 ~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~-~l-~va~~--~~~~v~v~D~~tg~l~~~----i~ 363 (543)
T 1nir_A 292 PEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHR-YF-MTAAN--NSNKVAVIDSKDRRLSAL----VD 363 (543)
T ss_dssp SEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSC-EE-EEEEG--GGTEEEEEETTTTEEEEE----EE
T ss_pred CEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCC-EE-EEEec--CCCeEEEEECCCCeEEEe----ec
Confidence 344444444678888998775532211111112223455654432 32 33222 235788999988753221 11
Q ss_pred ccccccCCCcccE-EE-C-CEEEEEec-CCcEEEEEEcCCC-----eeecCCCCCcccccCCCCcccccceeecccCCCe
Q 018005 191 SMILSQSSHQEGV-FY-K-GSLYFTTP-EPFSIVRFDLENG-----IWETPNDANDHMTMMLPHELTFFRLVNDGEESNK 261 (362)
Q Consensus 191 ~~~~~~~~~~~~v-~~-~-G~ly~~~~-~~~~i~~~D~~~~-----~w~~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~ 261 (362)
....+. ...... +. + |.+|+.+. ...+|.++|.+++ .|+.+..-. .+... ...+..- -+|+
T Consensus 364 ~g~~ph-~g~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~------~~g~~-~~~v~~~--pdg~ 433 (543)
T 1nir_A 364 VGKTPH-PGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQ------GQGGG-SLFIKTH--PKSS 433 (543)
T ss_dssp CSSSBC-CTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEE------CSCSC-CCCEECC--TTCC
T ss_pred cCCCCC-CCCCcccCCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEE------cCCCC-ceEEEcC--CCCC
Confidence 100110 001112 22 3 67766654 3458999999873 255432100 11111 1112111 4555
Q ss_pred EEEEEEeecCC--ccceEEEEEECCCCCEEEEecccHHHHHHhhhccccCCccEEEE-eeCCEEEEEee----cCCeEEE
Q 018005 262 LYLIGGVGRNG--ISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCF-WHQGMICVCCY----TWPEILY 334 (362)
Q Consensus 262 L~vv~~~~~~~--~~~~i~vw~l~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~----~~~~v~~ 334 (362)
...++...... ...+|.||+.+..+.= ...||..-...+.. -+.......+ -.|+.+++... ..+.|.+
T Consensus 434 ~l~v~~~~~~~~~~~~~v~v~d~~~~~~~--~~~~~v~~~~~~~~--~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v 509 (543)
T 1nir_A 434 HLYVDTTFNPDARISQSVAVFDLKNLDAK--YQVLPIAEWADLGE--GAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVV 509 (543)
T ss_dssp EEEECCTTCSSHHHHTCEEEEETTCTTSC--CEEECHHHHHCCCS--SCCEEEEEEECSSSSEEEEEEECCTTSCCEEEE
T ss_pred cEEEecCCCCCcccCceEEEEECCCCCCC--eEEeechhhcccCC--CCCceEeccCCCCCCEEEEEeecCCCCCCeEEE
Confidence 44443211111 2568999988644321 12233211111110 0011111122 35677887743 2467999
Q ss_pred EECCCCceEEc
Q 018005 335 YNVARRTWHWL 345 (362)
Q Consensus 335 yd~~~~~w~~~ 345 (362)
||.+|.+-.+.
T Consensus 510 ~D~~t~~~~~~ 520 (543)
T 1nir_A 510 VDDKTLKLKAV 520 (543)
T ss_dssp EETTTTEEEEE
T ss_pred EECCCceEEEe
Confidence 99999877665
No 127
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=76.41 E-value=38 Score=29.41 Aligned_cols=106 Identities=13% Similarity=0.005 Sum_probs=44.7
Q ss_pred CCceEEEecCCCCeEEEEeCCcCceeeccCC---CCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCcccccc
Q 018005 109 SKGLLCFSLPSSSSFLVCNLVTLSSRTIDFP---TYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFD 185 (362)
Q Consensus 109 ~~Gll~~~~~~~~~~~v~NP~t~~w~~lP~~---~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~ 185 (362)
-+|-++... .++.+.+||..+++-...... .......++++.+.+ +.++.++ ....+.+||..++.-...-
T Consensus 104 ~d~~~l~~s-~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg---~~l~sgs--~dg~v~iwd~~~~~~~~~~ 177 (357)
T 4g56_B 104 SEKGILVAS-DSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDG---TQAVSGG--KDFSVKVWDLSQKAVLKSY 177 (357)
T ss_dssp TTTEEEEEE-TTSCEEEC--------CCCCEEECCCSSCEEEEEECSSS---SEEEEEE--TTSCEEEEETTTTEEEEEE
T ss_pred CCCCEEEEE-CCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCC---CEEEEEe--CCCeEEEEECCCCcEEEEE
Confidence 344333333 357899999998875433221 111122334444332 2333333 3457889998876432211
Q ss_pred cCCCCccccccCCCcccEEE--CC-EEEEEecCCcEEEEEEcCCCe
Q 018005 186 IDGFPSMILSQSSHQEGVFY--KG-SLYFTTPEPFSIVRFDLENGI 228 (362)
Q Consensus 186 ~~~~p~~~~~~~~~~~~v~~--~G-~ly~~~~~~~~i~~~D~~~~~ 228 (362)
.. .......+.+ +| .++..++....|..+|+.+.+
T Consensus 178 ----~~----h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~ 215 (357)
T 4g56_B 178 ----NA----HSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPK 215 (357)
T ss_dssp ----CC----CSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSS
T ss_pred ----cC----CCCCEEEEEEccCCCceeeeeccCCceEEEECCCCc
Confidence 00 0011122332 23 234444444578889987654
No 128
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=75.98 E-value=35 Score=28.89 Aligned_cols=149 Identities=9% Similarity=0.040 Sum_probs=75.6
Q ss_pred EEEEEeeecCCCeEEEEeCCCCcccccccCCCCccccccCCCcccEEE--CCEEEEEecCC----cEEEEEEcCCCeeec
Q 018005 158 KIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILSQSSHQEGVFY--KGSLYFTTPEP----FSIVRFDLENGIWET 231 (362)
Q Consensus 158 kv~~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~~~~v~~--~G~ly~~~~~~----~~i~~~D~~~~~w~~ 231 (362)
++++++. ....+.+||..++..+... ..+. ....++.. +|.+|+.+... ..|..||+++.....
T Consensus 57 ~l~~~~~--~~~~i~~~d~~~~~~~~~~--~~~~------~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~ 126 (333)
T 2dg1_A 57 QLFLLDV--FEGNIFKINPETKEIKRPF--VSHK------ANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQD 126 (333)
T ss_dssp CEEEEET--TTCEEEEECTTTCCEEEEE--ECSS------SSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEE
T ss_pred CEEEEEC--CCCEEEEEeCCCCcEEEEe--eCCC------CCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEE
Confidence 3554432 2347889999888765432 1010 11223333 68887765443 479999998876552
Q ss_pred CCCCCcccccCCCCcccccceeecccCCCeEEEEEEeecCCccceEEEEEECCCC-CEEEEecccHHHHHHhhhccccCC
Q 018005 232 PNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGISTTMKLWELGCGG-NWIEVERVPEMMCRKFMSVCYHNY 310 (362)
Q Consensus 232 ~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~L~vv~~~~~~~~~~~i~vw~l~~~~-~W~~v~~~p~~~~~~~~~~~~~~~ 310 (362)
+... .........+... -+|+|++..... ........||.++..+ ....+..- . ..
T Consensus 127 ~~~~-------~~~~~~~~~i~~d--~~g~l~v~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~-------~------~~ 183 (333)
T 2dg1_A 127 IIED-------LSTAYCIDDMVFD--SKGGFYFTDFRG-YSTNPLGGVYYVSPDFRTVTPIIQN-------I------SV 183 (333)
T ss_dssp EECS-------SSSCCCEEEEEEC--TTSCEEEEECCC-BTTBCCEEEEEECTTSCCEEEEEEE-------E------SS
T ss_pred EEcc-------CccCCcccceEEC--CCCCEEEEeccc-cccCCCceEEEEeCCCCEEEEeecC-------C------Cc
Confidence 2111 1111111223322 578888865421 0112345788887654 44433210 0 00
Q ss_pred ccEEEEe-eCCEEEEEeecCCeEEEEECCC
Q 018005 311 DHVYCFW-HQGMICVCCYTWPEILYYNVAR 339 (362)
Q Consensus 311 ~~~~~~~-~~~~i~~~~~~~~~v~~yd~~~ 339 (362)
..-.++. +++.+|+.....+.|..||+++
T Consensus 184 ~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~ 213 (333)
T 2dg1_A 184 ANGIALSTDEKVLWVTETTANRLHRIALED 213 (333)
T ss_dssp EEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred ccceEECCCCCEEEEEeCCCCeEEEEEecC
Confidence 1111222 2346777765566888999864
No 129
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=75.75 E-value=41 Score=29.51 Aligned_cols=146 Identities=10% Similarity=0.045 Sum_probs=68.1
Q ss_pred cCCCCeEEEEeCCcCcee--eccCCC-CCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCcccccccCCCCccc
Q 018005 117 LPSSSSFLVCNLVTLSSR--TIDFPT-YPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMI 193 (362)
Q Consensus 117 ~~~~~~~~v~NP~t~~w~--~lP~~~-~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~ 193 (362)
+..++.+.|||..+..-. .++... .......+.+.+... .+++.++ ....+.+|+..++...... .-+...
T Consensus 53 ~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~--~~l~s~s--~dg~v~vw~~~~~~~~~~~--~~~~~~ 126 (402)
T 2aq5_A 53 ASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHND--NVIASGS--EDCTVMVWEIPDGGLVLPL--REPVIT 126 (402)
T ss_dssp CSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCT--TEEEEEE--TTSEEEEEECCTTCCSSCB--CSCSEE
T ss_pred EcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCC--CEEEEEe--CCCeEEEEEccCCCCcccc--CCceEE
Confidence 334578899987553321 111111 111222344433122 2344443 3468999999887543211 011101
Q ss_pred cc-cCCCcccEEE--CC-EEEEEecCCcEEEEEEcCCCeeecCCC-CCcccccCCCCcccccceeecccCCCeEEEEEEe
Q 018005 194 LS-QSSHQEGVFY--KG-SLYFTTPEPFSIVRFDLENGIWETPND-ANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGV 268 (362)
Q Consensus 194 ~~-~~~~~~~v~~--~G-~ly~~~~~~~~i~~~D~~~~~w~~~~~-p~~~~~~~~p~~~~~~~lv~~~~~~G~L~vv~~~ 268 (362)
+. .......+.+ +| .+.+.++....+..+|+.+.+...... .. .......... . -+|++++.+.
T Consensus 127 ~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~------~~~~v~~~~~--~--~~~~~l~~~~- 195 (402)
T 2aq5_A 127 LEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDV------HPDTIYSVDW--S--RDGALICTSC- 195 (402)
T ss_dssp EECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTT------CCSCEEEEEE--C--TTSSCEEEEE-
T ss_pred ecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCC------CCCceEEEEE--C--CCCCEEEEEe-
Confidence 11 0011122333 33 355555555579999998875543210 10 1222222222 1 4777777665
Q ss_pred ecCCccceEEEEEEC
Q 018005 269 GRNGISTTMKLWELG 283 (362)
Q Consensus 269 ~~~~~~~~i~vw~l~ 283 (362)
....+.+|++.
T Consensus 196 ----~d~~i~iwd~~ 206 (402)
T 2aq5_A 196 ----RDKRVRVIEPR 206 (402)
T ss_dssp ----TTSEEEEEETT
T ss_pred ----cCCcEEEEeCC
Confidence 23789999875
No 130
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=75.57 E-value=26 Score=33.19 Aligned_cols=122 Identities=11% Similarity=0.177 Sum_probs=62.5
Q ss_pred cccEEECCEEEEEecCCcEEEEEEc-CC--CeeecCCCCCcccccCCCC---cccccceeecccCCCeEEEEEEeecCCc
Q 018005 200 QEGVFYKGSLYFTTPEPFSIVRFDL-EN--GIWETPNDANDHMTMMLPH---ELTFFRLVNDGEESNKLYLIGGVGRNGI 273 (362)
Q Consensus 200 ~~~v~~~G~ly~~~~~~~~i~~~D~-~~--~~w~~~~~p~~~~~~~~p~---~~~~~~lv~~~~~~G~L~vv~~~~~~~~ 273 (362)
..+++.+|.+|+.+.....+.++|. ++ ..|+.- .+..... .+. ......++. .+|+||+...
T Consensus 56 ~~P~v~~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~-~~~~~~~--~~~~~~~~~~~~~~~---~~~~v~v~~~------ 123 (571)
T 2ad6_A 56 GAPLVIGDMMYVHSAFPNNTYALNLNDPGKIVWQHK-PKQDAST--KAVMCCDVVDRGLAY---GAGQIVKKQA------ 123 (571)
T ss_dssp SCCEEETTEEEEECSTTTCEEEEETTCTTSEEEEEC-CCCCGGG--GGGCTTCSCCCCCEE---ETTEEEEECT------
T ss_pred cccEEECCEEEEEeCCCCEEEEEeCCCCccEEEEEc-CCCCccc--cccccccccccccEE---ECCEEEEEeC------
Confidence 4578889999988762346999998 65 478762 1200000 000 001122332 5788777642
Q ss_pred cceEEEEEECCCCC--EEEEecccHHHHHHhhhccccCCccEEEEeeCCEEEEEeec-----CCeEEEEECCCCc--eEE
Q 018005 274 STTMKLWELGCGGN--WIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYT-----WPEILYYNVARRT--WHW 344 (362)
Q Consensus 274 ~~~i~vw~l~~~~~--W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-----~~~v~~yd~~~~~--w~~ 344 (362)
...+..++.. +++ |+.-..-+. ....+ .... +..++.||+.... .+.+.+||.++++ |+.
T Consensus 124 dg~l~alD~~-tG~~~W~~~~~~~~----~~~~~---~~~P---~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 192 (571)
T 2ad6_A 124 NGHLLALDAK-TGKINWEVEVCDPK----VGSTL---TQAP---FVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRA 192 (571)
T ss_dssp TSEEEEEETT-TCCEEEEEECCCGG----GTCBC---CSCC---EEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEE
T ss_pred CCEEEEEECC-CCCEEEEecCCCCC----cccee---ccCC---EEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEE
Confidence 1334444332 343 875321110 00000 0111 1246788886542 4689999999874 554
No 131
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=75.48 E-value=45 Score=29.84 Aligned_cols=105 Identities=15% Similarity=0.119 Sum_probs=57.1
Q ss_pred CCEEEEEecCCcEEEEEEcCCCeeecCCCCCcccccCCCCcccccceeecccCCCeEEEEEEeecCCccceEEEEEECCC
Q 018005 206 KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGISTTMKLWELGCG 285 (362)
Q Consensus 206 ~G~ly~~~~~~~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~L~vv~~~~~~~~~~~i~vw~l~~~ 285 (362)
+|...+.+.....+..||+.+.+-...... ... .-..+. .+|+..+.+. ....+.+|+++..
T Consensus 321 ~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~-------h~~--~v~~~~----~~~~~l~s~s-----~dg~v~vwd~~~~ 382 (464)
T 3v7d_B 321 ERKRCISASMDTTIRIWDLENGELMYTLQG-------HTA--LVGLLR----LSDKFLVSAA-----ADGSIRGWDANDY 382 (464)
T ss_dssp TTTEEEEEETTSCEEEEETTTTEEEEEECC-------CSS--CEEEEE----ECSSEEEEEE-----TTSEEEEEETTTC
T ss_pred CCCEEEEEeCCCcEEEEECCCCcEEEEEeC-------CCC--cEEEEE----EcCCEEEEEe-----CCCcEEEEECCCC
Confidence 455555565556799999987643321101 111 112232 5677666665 2368999988643
Q ss_pred CC-EEEEecccHHHHHHhhhccccCCccEEEEeeCCEEEEEeecCCeEEEEECCCCceEE
Q 018005 286 GN-WIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYTWPEILYYNVARRTWHW 344 (362)
Q Consensus 286 ~~-W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~v~~yd~~~~~w~~ 344 (362)
.. +..-.. ......++..++.+++.+. .+.+.+||+++++-..
T Consensus 383 ~~~~~~~~~---------------~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~ 426 (464)
T 3v7d_B 383 SRKFSYHHT---------------NLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVH 426 (464)
T ss_dssp CEEEEEECT---------------TCCCEEEEEECSSEEEEEE-TTEEEEEETTTCCEEE
T ss_pred ceeeeecCC---------------CCccEEEEEeCCCEEEEec-CCeEEEEECCCCcEEe
Confidence 32 221110 1122334444444444443 6789999999987665
No 132
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=75.28 E-value=46 Score=29.84 Aligned_cols=111 Identities=6% Similarity=0.000 Sum_probs=55.0
Q ss_pred cCCc-eEEEecCCCCeEEEEeCCcCceeecc--CCC-CCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCcccc
Q 018005 108 SSKG-LLCFSLPSSSSFLVCNLVTLSSRTID--FPT-YPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSK 183 (362)
Q Consensus 108 s~~G-ll~~~~~~~~~~~v~NP~t~~w~~lP--~~~-~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~ 183 (362)
+-+| .|+.. ...+.+++|+..+++....+ ... .......+.+.+.....+.++.++ ....+.+||..++.-..
T Consensus 158 sp~~~~l~~~-~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~--~d~~i~vwd~~~~~~~~ 234 (450)
T 2vdu_B 158 AEDDTTVIIA-DKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSD--RDEHIKISHYPQCFIVD 234 (450)
T ss_dssp CTTSSEEEEE-ETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEE--TTSCEEEEEESCTTCEE
T ss_pred cCCCCEEEEE-eCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEc--CCCcEEEEECCCCceee
Confidence 3445 33333 33577888888776643211 110 111223445554311124454444 34578899987654321
Q ss_pred cccCCCCccccccCCCcccEEE-CCEEEEEecCCcEEEEEEcCCCe
Q 018005 184 FDIDGFPSMILSQSSHQEGVFY-KGSLYFTTPEPFSIVRFDLENGI 228 (362)
Q Consensus 184 ~~~~~~p~~~~~~~~~~~~v~~-~G~ly~~~~~~~~i~~~D~~~~~ 228 (362)
.- ... .......+.+ +|.+.+.++....|..||+.+.+
T Consensus 235 ~~---~~~----h~~~v~~~~~sd~~~l~s~~~d~~v~vwd~~~~~ 273 (450)
T 2vdu_B 235 KW---LFG----HKHFVSSICCGKDYLLLSAGGDDKIFAWDWKTGK 273 (450)
T ss_dssp EE---CCC----CSSCEEEEEECSTTEEEEEESSSEEEEEETTTCC
T ss_pred ee---ecC----CCCceEEEEECCCCEEEEEeCCCeEEEEECCCCc
Confidence 10 000 0011122222 67766666666689999998764
No 133
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=75.09 E-value=42 Score=29.30 Aligned_cols=150 Identities=8% Similarity=-0.019 Sum_probs=73.2
Q ss_pred ceEEEecCCCCeEEEEeCCcCceeeccCCCC-----CCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCcccccc
Q 018005 111 GLLCFSLPSSSSFLVCNLVTLSSRTIDFPTY-----PFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFD 185 (362)
Q Consensus 111 Gll~~~~~~~~~~~v~NP~t~~w~~lP~~~~-----~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~ 185 (362)
+-+++.+..++.+.+||..+++....-.... ......+.+.+.+. ..++..........+.+||..++.-....
T Consensus 178 ~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~l~~~~~d~~~~~i~~~d~~~~~~~~~~ 256 (416)
T 2pm9_A 178 AHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNS-TRVATATGSDNDPSILIWDLRNANTPLQT 256 (416)
T ss_dssp TTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCT-TEEEEEECCSSSCCCCEEETTSTTSCSBC
T ss_pred CcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCC-CEEEEEECCCCCceEEEEeCCCCCCCcEE
Confidence 4444444446789999999987544322221 12223344443322 23333222212237889998775321111
Q ss_pred cCCCC-ccccccCCCcccEEE---CCEEEEEecCCcEEEEEEcCCCeeec-CCCCCcccccCCCCcccccceeecccCCC
Q 018005 186 IDGFP-SMILSQSSHQEGVFY---KGSLYFTTPEPFSIVRFDLENGIWET-PNDANDHMTMMLPHELTFFRLVNDGEESN 260 (362)
Q Consensus 186 ~~~~p-~~~~~~~~~~~~v~~---~G~ly~~~~~~~~i~~~D~~~~~w~~-~~~p~~~~~~~~p~~~~~~~lv~~~~~~G 260 (362)
+. . .......+.+ +|.+.+.++....+..||+.+.+-.. +. . ........... -+|
T Consensus 257 ---~~~~----~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~-~-------~~~~v~~~~~s----~~~ 317 (416)
T 2pm9_A 257 ---LNQG----HQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFP-A-------RGNWCFKTKFA----PEA 317 (416)
T ss_dssp ---CCSC----CSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEE-C-------SSSCCCCEEEC----TTC
T ss_pred ---eecC----ccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeec-C-------CCCceEEEEEC----CCC
Confidence 11 1 0011223333 56666666665689999988753322 11 1 11111222221 355
Q ss_pred -eEEEEEEeecCCccceEEEEEECCC
Q 018005 261 -KLYLIGGVGRNGISTTMKLWELGCG 285 (362)
Q Consensus 261 -~L~vv~~~~~~~~~~~i~vw~l~~~ 285 (362)
++++.+. ....+.+|+++..
T Consensus 318 ~~~l~s~~-----~d~~i~iw~~~~~ 338 (416)
T 2pm9_A 318 PDLFACAS-----FDNKIEVQTLQNL 338 (416)
T ss_dssp TTEEEECC-----SSSEEEEEESCCC
T ss_pred CCEEEEEe-----cCCcEEEEEccCC
Confidence 5666654 2377899988644
No 134
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=74.54 E-value=38 Score=28.61 Aligned_cols=140 Identities=13% Similarity=0.165 Sum_probs=67.3
Q ss_pred ceeeeeeCCCCCeEe-ecCCcCCCCCCceEEEecCCc-eEEEecCCCCeEEEEeCCcCceee-ccCCCCC----CccceE
Q 018005 76 DQYPLYDSTHGTWRR-LSLPYSLLLPSAATLLSSSKG-LLCFSLPSSSSFLVCNLVTLSSRT-IDFPTYP----FDFELL 148 (362)
Q Consensus 76 ~~~~~~d~~~~~w~~-~~~~~~~~~~~~~~~~~s~~G-ll~~~~~~~~~~~v~NP~t~~w~~-lP~~~~~----~~~~~~ 148 (362)
..+..+|...++... ++.+... ....+..+-+| .+++.....+.+.++|+.|++... ++....+ .....+
T Consensus 21 ~~v~~~d~~~~~~~~~~~~~~~~---~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~ 97 (349)
T 1jmx_B 21 NNLHVVDVASDTVYKSCVMPDKF---GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSF 97 (349)
T ss_dssp TEEEEEETTTTEEEEEEECSSCC---SSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCE
T ss_pred CeEEEEECCCCcEEEEEecCCCC---CCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccce
Confidence 457788987765432 3433100 11223334455 566655456789999999988543 2211110 111234
Q ss_pred EEEeCCCceEEEEEeee---------cCCCeEEEEeCCCCcccccccCCCCccccccCCCcccEEE--CCEEEEEecCCc
Q 018005 149 TLVSTPSGYKIFMLFAK---------SFPNYAFVYDSTDQSWSKFDIDGFPSMILSQSSHQEGVFY--KGSLYFTTPEPF 217 (362)
Q Consensus 149 ~~~~~~~~ykv~~~~~~---------~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~~~~v~~--~G~ly~~~~~~~ 217 (362)
++.+.+. .++..... .....+.+||..++.-... ......+. ....+.+ +|++|+.+ .
T Consensus 98 ~~spdg~--~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~----~~~~~~~~--~~~~~~~s~dg~l~~~~-~-- 166 (349)
T 1jmx_B 98 AISPDGK--EVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKP----VRTFPMPR--QVYLMRAADDGSLYVAG-P-- 166 (349)
T ss_dssp EECTTSS--EEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCC----SEEEECCS--SCCCEEECTTSCEEEES-S--
T ss_pred EECCCCC--EEEEEcccccccccccccCCCeEEEEECCCccccce----eeeccCCC--cccceeECCCCcEEEcc-C--
Confidence 4443322 33333321 1135889999876432111 11000111 1122223 67766632 2
Q ss_pred EEEEEEcCCCee
Q 018005 218 SIVRFDLENGIW 229 (362)
Q Consensus 218 ~i~~~D~~~~~w 229 (362)
.+.++|+.+.+.
T Consensus 167 ~i~~~d~~~~~~ 178 (349)
T 1jmx_B 167 DIYKMDVKTGKY 178 (349)
T ss_dssp SEEEECTTTCCE
T ss_pred cEEEEeCCCCce
Confidence 288889876543
No 135
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=74.38 E-value=37 Score=30.13 Aligned_cols=102 Identities=6% Similarity=-0.061 Sum_probs=48.8
Q ss_pred EEEEeeecCCCeEEEEeCCCCcccccccCCCCccccccCCCcccEEE-CCEEEEE-ec-CCcEEEEEEcCCCeee-cCCC
Q 018005 159 IFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILSQSSHQEGVFY-KGSLYFT-TP-EPFSIVRFDLENGIWE-TPND 234 (362)
Q Consensus 159 v~~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~~~~v~~-~G~ly~~-~~-~~~~i~~~D~~~~~w~-~~~~ 234 (362)
++++++......+.+||..++.-...- .... .....++. ++...+. .+ ....|.+||..+.+-. .+..
T Consensus 291 ~la~~~gs~D~~I~iwd~~t~~~~~~~--~~~~------~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~g 362 (420)
T 4gga_A 291 VLATGGGTSDRHIRIWNVCSGACLSAV--DAHS------QVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKG 362 (420)
T ss_dssp EEEEEECTTTCEEEEEETTTTEEEEEE--ECSS------CEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECC
T ss_pred EEEEEeecCCCEEEEEeCCccccceee--cccc------ceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcC
Confidence 344444334568999999876532221 0000 11111222 3333333 22 3457889998765322 2110
Q ss_pred CCcccccCCCCcccccceeecccCCCeEEEEEEeecCCccceEEEEEECCC
Q 018005 235 ANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGISTTMKLWELGCG 285 (362)
Q Consensus 235 p~~~~~~~~p~~~~~~~lv~~~~~~G~L~vv~~~~~~~~~~~i~vw~l~~~ 285 (362)
...... .+..- -+|++++.++ ...+|.+|++.+.
T Consensus 363 --------H~~~V~--~l~~s--pdg~~l~S~s-----~D~tvriWdv~~~ 396 (420)
T 4gga_A 363 --------HTSRVL--SLTMS--PDGATVASAA-----ADETLRLWRCFEL 396 (420)
T ss_dssp --------CSSCEE--EEEEC--TTSSCEEEEE-----TTTEEEEECCSCS
T ss_pred --------CCCCEE--EEEEc--CCCCEEEEEe-----cCCeEEEEECCCC
Confidence 111111 22211 4787766665 2378999988543
No 136
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=74.00 E-value=47 Score=29.41 Aligned_cols=143 Identities=8% Similarity=0.037 Sum_probs=70.9
Q ss_pred CceEEEecCCCCeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCcccccccCCC
Q 018005 110 KGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGF 189 (362)
Q Consensus 110 ~Gll~~~~~~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~~~~~ 189 (362)
+|-+++.+..++.+.+||..+++....-.. .......+++.+.+ ++++.++ ....+.+||..+..- .. .+
T Consensus 119 ~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~-h~~~V~~v~~~~~~---~~l~sgs--~D~~i~iwd~~~~~~--~~--~~ 188 (410)
T 1vyh_C 119 VFSVMVSASEDATIKVWDYETGDFERTLKG-HTDSVQDISFDHSG---KLLASCS--ADMTIKLWDFQGFEC--IR--TM 188 (410)
T ss_dssp SSSEEEEEESSSCEEEEETTTCCCCEEECC-CSSCEEEEEECTTS---SEEEEEE--TTSCCCEEETTSSCE--EE--CC
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEEEEEec-cCCcEEEEEEcCCC---CEEEEEe--CCCeEEEEeCCCCce--eE--EE
Confidence 343344444467899999999875332111 11122334444322 3444444 335677888865431 11 11
Q ss_pred CccccccCCCcccEEE--CCEEEEEecCCcEEEEEEcCCCeeec-CCCCCcccccCCCCcccccceeecccCCCeEEEEE
Q 018005 190 PSMILSQSSHQEGVFY--KGSLYFTTPEPFSIVRFDLENGIWET-PNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIG 266 (362)
Q Consensus 190 p~~~~~~~~~~~~v~~--~G~ly~~~~~~~~i~~~D~~~~~w~~-~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~L~vv~ 266 (362)
..+ ...-..+.+ +|...+.++...++..+|+.+..-.. +. . ....... +... -+|.+++.+
T Consensus 189 ~~h----~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~-~-------h~~~v~~--~~~~--~~g~~l~s~ 252 (410)
T 1vyh_C 189 HGH----DHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT-G-------HREWVRM--VRPN--QDGTLIASC 252 (410)
T ss_dssp CCC----SSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEE-C-------CSSCEEE--EEEC--TTSSEEEEE
T ss_pred cCC----CCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEe-C-------CCccEEE--EEEC--CCCCEEEEE
Confidence 110 011122223 46555556666689999998764322 11 1 1111111 2111 577777776
Q ss_pred EeecCCccceEEEEEEC
Q 018005 267 GVGRNGISTTMKLWELG 283 (362)
Q Consensus 267 ~~~~~~~~~~i~vw~l~ 283 (362)
+ ....+.+|.+.
T Consensus 253 s-----~D~~v~vwd~~ 264 (410)
T 1vyh_C 253 S-----NDQTVRVWVVA 264 (410)
T ss_dssp E-----TTSCEEEEETT
T ss_pred c-----CCCeEEEEECC
Confidence 6 23678999874
No 137
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=73.97 E-value=49 Score=29.53 Aligned_cols=144 Identities=7% Similarity=0.014 Sum_probs=70.9
Q ss_pred EEEEeeecCCCeEEEEeCCCCcccccccCCCCccccccCCCcccEEE---CCEEEEEecCCcEEEEEEcCCCeeecCCCC
Q 018005 159 IFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILSQSSHQEGVFY---KGSLYFTTPEPFSIVRFDLENGIWETPNDA 235 (362)
Q Consensus 159 v~~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~~~~v~~---~G~ly~~~~~~~~i~~~D~~~~~w~~~~~p 235 (362)
+++.|+ ....+.+||..++.-.... .... ....-..+.+ +|.+.+.++...+|..+|++++....+...
T Consensus 134 ~lasGs--~dg~i~lWd~~~~~~~~~~--~~~g----H~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~ 205 (435)
T 4e54_B 134 TVAVGS--KGGDIMLWNFGIKDKPTFI--KGIG----AGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASS 205 (435)
T ss_dssp CEEEEE--TTSCEEEECSSCCSCCEEE--CCCS----SSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECC
T ss_pred EEEEEe--CCCEEEEEECCCCCceeEE--EccC----CCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEecc
Confidence 455554 3457889998776533222 1110 0011223333 455554555555789999988766553211
Q ss_pred CcccccCCCCcccccceeecccCCCeEEEEEEeecCCccceEEEEEECCCCCEEEEecccHHHHHHhhhccccCCccEEE
Q 018005 236 NDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYC 315 (362)
Q Consensus 236 ~~~~~~~~p~~~~~~~lv~~~~~~G~L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~ 315 (362)
.........+... -+|++++.+. ....+.+|.++. .. +..+. .+...+.+
T Consensus 206 -------~~~~~~~~~~~~~--~~~~~l~~g~-----~dg~i~~wd~~~-~~---~~~~~------------~h~~~v~~ 255 (435)
T 4e54_B 206 -------DTINIWFCSLDVS--ASSRMVVTGD-----NVGNVILLNMDG-KE---LWNLR------------MHKKKVTH 255 (435)
T ss_dssp -------SSCSCCCCCEEEE--TTTTEEEEEC-----SSSBEEEEESSS-CB---CCCSB------------CCSSCEEE
T ss_pred -------CCCCccEEEEEEC--CCCCEEEEEe-----CCCcEeeeccCc-ce---eEEEe------------cccceEEe
Confidence 1111111122211 4777777765 346789998742 21 11110 11122333
Q ss_pred Ee---eCCEEEEEeecCCeEEEEECCCC
Q 018005 316 FW---HQGMICVCCYTWPEILYYNVARR 340 (362)
Q Consensus 316 ~~---~~~~i~~~~~~~~~v~~yd~~~~ 340 (362)
+. .++.+++.+...+.|.+||+++.
T Consensus 256 v~~~p~~~~~~~s~s~d~~v~iwd~~~~ 283 (435)
T 4e54_B 256 VALNPCCDWFLATASVDQTVKIWDLRQV 283 (435)
T ss_dssp EEECTTCSSEEEEEETTSBCCEEETTTC
T ss_pred eeecCCCceEEEEecCcceeeEEecccc
Confidence 32 23345555555567888888764
No 138
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=73.17 E-value=40 Score=28.20 Aligned_cols=151 Identities=11% Similarity=0.074 Sum_probs=70.5
Q ss_pred cCCceEEEecCCCCeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCcccccccC
Q 018005 108 SSKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDID 187 (362)
Q Consensus 108 s~~Gll~~~~~~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~~~ 187 (362)
+.+|-+++.+..++.+.+||..+++....-..........+.+.+.+ +.++.++ ....+.+||..++.=...-.
T Consensus 158 ~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~l~~~~--~d~~i~iwd~~~~~~~~~~~- 231 (312)
T 4ery_A 158 NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG---KYILAAT--LDNTLKLWDYSKGKCLKTYT- 231 (312)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTS---SEEEEEE--TTTEEEEEETTTTEEEEEEC-
T ss_pred cCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCC---CEEEEEc--CCCeEEEEECCCCcEEEEEE-
Confidence 34553333333467899999988875432111111122233444332 2233333 34588999987754211100
Q ss_pred CCCccccccCCCcccEE--ECCEEEEEecCCcEEEEEEcCCCeee-cCCCCCcccccCCCCcccccceeecccCCCeEEE
Q 018005 188 GFPSMILSQSSHQEGVF--YKGSLYFTTPEPFSIVRFDLENGIWE-TPNDANDHMTMMLPHELTFFRLVNDGEESNKLYL 264 (362)
Q Consensus 188 ~~p~~~~~~~~~~~~v~--~~G~ly~~~~~~~~i~~~D~~~~~w~-~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~L~v 264 (362)
.... ........+ -+|.+.+.++....|..||+.+.+-. .+. . ..... ..+... -++.+.+
T Consensus 232 ~~~~----~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~-~-------h~~~v--~~~~~~--p~~~~l~ 295 (312)
T 4ery_A 232 GHKN----EKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQ-G-------HTDVV--ISTACH--PTENIIA 295 (312)
T ss_dssp SSCC----SSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEEC-C-------CSSCE--EEEEEC--SSSSEEE
T ss_pred ecCC----ceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhh-c-------cCCcE--EEEeec--CcCCceE
Confidence 1000 000111111 14555555555567999999876432 221 1 11111 122211 4566666
Q ss_pred EEEeecCCccceEEEEEEC
Q 018005 265 IGGVGRNGISTTMKLWELG 283 (362)
Q Consensus 265 v~~~~~~~~~~~i~vw~l~ 283 (362)
.+.. .....+.+|+.|
T Consensus 296 s~~~---~~d~~i~~W~~d 311 (312)
T 4ery_A 296 SAAL---ENDKTIKLWKSD 311 (312)
T ss_dssp EEEC---TTTCCEEEEECC
T ss_pred EEEc---cCCccEEEecCC
Confidence 5542 124679999875
No 139
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=73.03 E-value=15 Score=31.10 Aligned_cols=27 Identities=19% Similarity=0.155 Sum_probs=21.7
Q ss_pred CCEEEEEecCCcEEEEEEcCCCeeecC
Q 018005 206 KGSLYFTTPEPFSIVRFDLENGIWETP 232 (362)
Q Consensus 206 ~G~ly~~~~~~~~i~~~D~~~~~w~~~ 232 (362)
+|.+||+......|..||+++......
T Consensus 24 ~~~l~~~d~~~~~i~~~d~~~~~~~~~ 50 (297)
T 3g4e_A 24 SNSLLFVDIPAKKVCRWDSFTKQVQRV 50 (297)
T ss_dssp TTEEEEEETTTTEEEEEETTTCCEEEE
T ss_pred CCEEEEEECCCCEEEEEECCCCcEEEE
Confidence 489999988777899999998766543
No 140
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=72.72 E-value=69 Score=30.69 Aligned_cols=190 Identities=11% Similarity=-0.089 Sum_probs=102.1
Q ss_pred ecCCceEEEecCCCCeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCccccccc
Q 018005 107 SSSKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDI 186 (362)
Q Consensus 107 ~s~~Gll~~~~~~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~~ 186 (362)
...+|.||+.....+.+..+++.......+-.... ..-.+++++..+ -++++... ....+++++.....=+...
T Consensus 45 d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~-~~P~GlAvD~~~--~~LY~tD~--~~~~I~v~~~dG~~~~~l~- 118 (628)
T 4a0p_A 45 DVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGL-DYPEGMAVDWLG--KNLYWADT--GTNRIEVSKLDGQHRQVLV- 118 (628)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSC-SCCCEEEEETTT--TEEEEEET--TTTEEEEEETTSTTCEEEE-
T ss_pred ECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCC-CCcceEEEEeCC--CEEEEEEC--CCCEEEEEecCCCcEEEEE-
Confidence 44567888876666788888887665444332211 112356666322 26776543 3468889988543211211
Q ss_pred CCCCccccccCCCcccEEE---CCEEEEEecC-CcEEEEEEcCCCeeecCCCCCcccccCCCCcccccceeecccCCCeE
Q 018005 187 DGFPSMILSQSSHQEGVFY---KGSLYFTTPE-PFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKL 262 (362)
Q Consensus 187 ~~~p~~~~~~~~~~~~v~~---~G~ly~~~~~-~~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~L 262 (362)
. . .+ ....++++ +|.+||.... ...|..++++...-..+.... ..|. .|... ..+++|
T Consensus 119 -~--~-~l---~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~~~-----~~P~-----GlalD-~~~~~L 180 (628)
T 4a0p_A 119 -W--K-DL---DSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVPNV-----GRAN-----GLTID-YAKRRL 180 (628)
T ss_dssp -C--S-SC---CCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSC-----SSEE-----EEEEE-TTTTEE
T ss_pred -e--C-CC---CCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEECCC-----CCcc-----eEEEc-cccCEE
Confidence 0 0 11 12334554 5999999743 458999998765433321110 0222 23321 036889
Q ss_pred EEEEEeecCCccceEEEEEECCCCCEEEEecccHHHHHHhhhccccCCccEEEEeeCCEEEEEeecCCeEEEEECCCC
Q 018005 263 YLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYTWPEILYYNVARR 340 (362)
Q Consensus 263 ~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~v~~yd~~~~ 340 (362)
|++.. ....|++..++.... +.+..- + ..++.....++.||+.....+.|...|..++
T Consensus 181 Y~aD~-----~~~~I~~~d~dG~~~-~v~~~~--------l------~~P~glav~~~~ly~tD~~~~~I~~~dk~tg 238 (628)
T 4a0p_A 181 YWTDL-----DTNLIESSNMLGLNR-EVIADD--------L------PHPFGLTQYQDYIYWTDWSRRSIERANKTSG 238 (628)
T ss_dssp EEEET-----TTTEEEEEETTSCSC-EEEEEC--------C------SCEEEEEEETTEEEEEETTTTEEEEEETTTC
T ss_pred EEEEC-----CCCEEEEEcCCCCce-EEeecc--------C------CCceEEEEECCEEEEecCCCCEEEEEECCCC
Confidence 99875 345666666643222 222110 0 0122222345788888766778888887665
No 141
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=72.68 E-value=29 Score=33.59 Aligned_cols=123 Identities=15% Similarity=0.172 Sum_probs=63.3
Q ss_pred cccEEECCEEEEEecCCcEEEEEEcCCC--eeecCCCCCcccccCCC---CcccccceeecccCCCeEEEEEEeecCCcc
Q 018005 200 QEGVFYKGSLYFTTPEPFSIVRFDLENG--IWETPNDANDHMTMMLP---HELTFFRLVNDGEESNKLYLIGGVGRNGIS 274 (362)
Q Consensus 200 ~~~v~~~G~ly~~~~~~~~i~~~D~~~~--~w~~~~~p~~~~~~~~p---~~~~~~~lv~~~~~~G~L~vv~~~~~~~~~ 274 (362)
..+++.+|.+|+.+... .+.++|.++. .|+.-. ...... .+ .......+.. .+|+||+... .
T Consensus 71 ~~P~v~~g~vyv~~~~~-~v~AlD~~tG~~~W~~~~-~~~~~~--~~~~~~~~~~~~~a~---~~~~v~v~~~------d 137 (677)
T 1kb0_A 71 ATPVVVDGIMYVSASWS-VVHAIDTRTGNRIWTYDP-QIDRST--GFKGCCDVVNRGVAL---WKGKVYVGAW------D 137 (677)
T ss_dssp CCCEEETTEEEEECGGG-CEEEEETTTTEEEEEECC-CCCGGG--GGGSSSCSCCCCCEE---ETTEEEEECT------T
T ss_pred eCCEEECCEEEEECCCC-eEEEEECCCCcEEEEEcC-CCCccc--cccccccCCCCCceE---ECCEEEEEcC------C
Confidence 45788899999887643 6999998764 787521 200000 00 0011223332 5777777632 2
Q ss_pred ceEEEEEECCCCC--EEEEecccHHHHHHhhhccccCCccEEEEeeCCEEEEEeec-----CCeEEEEECCCCc--eEEc
Q 018005 275 TTMKLWELGCGGN--WIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYT-----WPEILYYNVARRT--WHWL 345 (362)
Q Consensus 275 ~~i~vw~l~~~~~--W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-----~~~v~~yd~~~~~--w~~~ 345 (362)
..+..++.. +++ |+.-.... ... .+.... ..+..++.||+.... .+.|.+||.++++ |+.-
T Consensus 138 g~l~alD~~-tG~~~W~~~~~~~------~~~-~~~~~~--~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~ 207 (677)
T 1kb0_A 138 GRLIALDAA-TGKEVWHQNTFEG------QKG-SLTITG--APRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWF 207 (677)
T ss_dssp SEEEEEETT-TCCEEEEEETTTT------CCS-SCBCCS--CCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CEEEEEECC-CCCEEeeecCCcC------cCc-Cccccc--CcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEec
Confidence 344444442 343 88532100 000 000001 112346788886532 4679999999985 6553
No 142
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=72.62 E-value=41 Score=28.10 Aligned_cols=202 Identities=7% Similarity=0.003 Sum_probs=92.7
Q ss_pred ceEEEecCCCCeEEEEeCCcCceeeccCCC-CCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCC-cccccccCC
Q 018005 111 GLLCFSLPSSSSFLVCNLVTLSSRTIDFPT-YPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQ-SWSKFDIDG 188 (362)
Q Consensus 111 Gll~~~~~~~~~~~v~NP~t~~w~~lP~~~-~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~-~W~~~~~~~ 188 (362)
|-+++.+..++.+.+||..++++..+.... .......+++.+... ...++.++ ....+.+||..++ .+.......
T Consensus 67 g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~-g~~l~s~s--~d~~v~~wd~~~~~~~~~~~~~~ 143 (297)
T 2pm7_B 67 GTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEY-GPMLLVAS--SDGKVSVVEFKENGTTSPIIIDA 143 (297)
T ss_dssp CSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGG-CSEEEEEE--TTSEEEEEEBCSSSCBCCEEEEC
T ss_pred CCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCC-CcEEEEEE--CCCcEEEEEecCCCceeeeeeec
Confidence 534444445688999999988765443221 111223344443211 12333333 3467889998765 232111001
Q ss_pred CCccccccCCCcccEEE---------------CCEEEEEecCCcEEEEEEcCCCe--eecCC-CCCcccccCCCCccccc
Q 018005 189 FPSMILSQSSHQEGVFY---------------KGSLYFTTPEPFSIVRFDLENGI--WETPN-DANDHMTMMLPHELTFF 250 (362)
Q Consensus 189 ~p~~~~~~~~~~~~v~~---------------~G~ly~~~~~~~~i~~~D~~~~~--w~~~~-~p~~~~~~~~p~~~~~~ 250 (362)
... ....+.. +|...+.++....|..+|+.+.. +.... ... ..... .
T Consensus 144 h~~-------~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~------H~~~V--~ 208 (297)
T 2pm7_B 144 HAI-------GVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEG------HSDWV--R 208 (297)
T ss_dssp CSS-------CEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECC------CSSCE--E
T ss_pred ccC-------ccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecC------CCCce--E
Confidence 000 0001111 24455555555578888886532 32211 000 11111 1
Q ss_pred ceeecccCC---CeEEEEEEeecCCccceEEEEEECCCC-CEEEEecccHHHHHHhhhccccCCccEEEE--eeCCEEEE
Q 018005 251 RLVNDGEES---NKLYLIGGVGRNGISTTMKLWELGCGG-NWIEVERVPEMMCRKFMSVCYHNYDHVYCF--WHQGMICV 324 (362)
Q Consensus 251 ~lv~~~~~~---G~L~vv~~~~~~~~~~~i~vw~l~~~~-~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~ 324 (362)
.+... -+ +.+++.+. ...++.+|.++... .|....-.. . .....+..+ ..++.+++
T Consensus 209 ~v~~s--p~~~~~~~las~s-----~D~~v~iWd~~~~~~~~~~~~~~~-------~----~~~~~v~~~~~s~~g~~la 270 (297)
T 2pm7_B 209 DVAWS--PTVLLRSYMASVS-----QDRTCIIWTQDNEQGPWKKTLLKE-------E----KFPDVLWRASWSLSGNVLA 270 (297)
T ss_dssp EEEEC--CCCSSSEEEEEEE-----TTSCEEEEEESSTTSCCEEEESSS-------S----CCSSCEEEEEECSSSCCEE
T ss_pred EEEEC--CCCCCceEEEEEE-----CCCcEEEEEeCCCCCccceeeeec-------c----cCCCcEEEEEECCCCCEEE
Confidence 22211 23 35555554 23789999996543 365421100 0 001122222 23344444
Q ss_pred EeecCCeEEEEECC-CCceEEcCCC
Q 018005 325 CCYTWPEILYYNVA-RRTWHWLPSC 348 (362)
Q Consensus 325 ~~~~~~~v~~yd~~-~~~w~~~~~~ 348 (362)
.....+.+.+|+.. .++|+.+..+
T Consensus 271 s~~~D~~v~lw~~~~~g~w~~~~~~ 295 (297)
T 2pm7_B 271 LSGGDNKVTLWKENLEGKWEPAGEV 295 (297)
T ss_dssp EEETTSCEEEEEECTTSCEEEC---
T ss_pred EEcCCCcEEEEEECCCCcEEecccc
Confidence 44456678999987 5689877543
No 143
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=72.10 E-value=61 Score=30.57 Aligned_cols=112 Identities=13% Similarity=0.064 Sum_probs=64.0
Q ss_pred CCceEEEecCCCCeEEEEeC-CcCc--eeeccCCCCC-C-------ccceEEEEeCCCceEEEEEeeecCCCeEEEEeCC
Q 018005 109 SKGLLCFSLPSSSSFLVCNL-VTLS--SRTIDFPTYP-F-------DFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDST 177 (362)
Q Consensus 109 ~~Gll~~~~~~~~~~~v~NP-~t~~--w~~lP~~~~~-~-------~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~ 177 (362)
.+|.|++.....+.++.+|+ .|++ |..-+..... . .....++... +|++.. ....+..+|.+
T Consensus 61 ~~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~v~v~~---~dg~l~alD~~ 133 (571)
T 2ad6_A 61 IGDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAG----QIVKKQ---ANGHLLALDAK 133 (571)
T ss_dssp ETTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETT----EEEEEC---TTSEEEEEETT
T ss_pred ECCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECC----EEEEEe---CCCEEEEEECC
Confidence 37777776542467899999 8988 5543222110 0 0011223221 555432 23578889987
Q ss_pred CC--cccccccCCCCccccccCCCcccEEECCEEEEEecC-----CcEEEEEEcCCC--eeec
Q 018005 178 DQ--SWSKFDIDGFPSMILSQSSHQEGVFYKGSLYFTTPE-----PFSIVRFDLENG--IWET 231 (362)
Q Consensus 178 ~~--~W~~~~~~~~p~~~~~~~~~~~~v~~~G~ly~~~~~-----~~~i~~~D~~~~--~w~~ 231 (362)
++ .|+... .-+. ........++..+|.+|+.... ...+.+||.++. .|+.
T Consensus 134 tG~~~W~~~~--~~~~--~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 192 (571)
T 2ad6_A 134 TGKINWEVEV--CDPK--VGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRA 192 (571)
T ss_dssp TCCEEEEEEC--CCGG--GTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEE
T ss_pred CCCEEEEecC--CCCC--ccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEE
Confidence 76 587643 1111 0011335567789999987642 347999999854 6765
No 144
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=71.68 E-value=39 Score=27.46 Aligned_cols=223 Identities=9% Similarity=-0.021 Sum_probs=103.5
Q ss_pred eeeeeeCCCCCeEeecCCcCCCCCCceEEEecCCc-eEEEecCCCCeEEEEeCCc-CceeeccCCCCCCccceEEEEeCC
Q 018005 77 QYPLYDSTHGTWRRLSLPYSLLLPSAATLLSSSKG-LLCFSLPSSSSFLVCNLVT-LSSRTIDFPTYPFDFELLTLVSTP 154 (362)
Q Consensus 77 ~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~~s~~G-ll~~~~~~~~~~~v~NP~t-~~w~~lP~~~~~~~~~~~~~~~~~ 154 (362)
.+..+|...+....+.-. . ..-..+.-+-+| .+.+.. .+.+++||..+ ++...+...........+.+.+.+
T Consensus 23 ~i~~~d~~~~~~~~~~~~---~-~~v~~~~~spdg~~l~~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg 96 (297)
T 2ojh_A 23 SIEIFNIRTRKMRVVWQT---P-ELFEAPNWSPDGKYLLLNS--EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDG 96 (297)
T ss_dssp EEEEEETTTTEEEEEEEE---S-SCCEEEEECTTSSEEEEEE--TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTS
T ss_pred eEEEEeCCCCceeeeccC---C-cceEeeEECCCCCEEEEEc--CCeEEEEeCCCCCCceEeccccccccccceEECCCC
Confidence 456677766554433210 1 111223334445 343333 46899999999 887766543322222334454432
Q ss_pred CceEEEEEee-ecCCCeEEEEeCCCCcccccccCCCCccccccCCCcccEEE--CCE-EEEEecCCc--EEEEEEcCCCe
Q 018005 155 SGYKIFMLFA-KSFPNYAFVYDSTDQSWSKFDIDGFPSMILSQSSHQEGVFY--KGS-LYFTTPEPF--SIVRFDLENGI 228 (362)
Q Consensus 155 ~~ykv~~~~~-~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~~~~v~~--~G~-ly~~~~~~~--~i~~~D~~~~~ 228 (362)
. .++.... ......+..++..++.-+... ... ....+.+ +|. +++...... .+..+|..+..
T Consensus 97 ~--~l~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~--------~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~ 164 (297)
T 2ojh_A 97 A--LYAISDKVEFGKSAIYLLPSTGGTPRLMT--KNL--------PSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGV 164 (297)
T ss_dssp S--EEEEEECTTTSSCEEEEEETTCCCCEECC--SSS--------SEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCC
T ss_pred C--EEEEEEeCCCCcceEEEEECCCCceEEee--cCC--------CccceEECCCCCEEEEEECCCCceEEEEEECCCCc
Confidence 2 2333221 123457778887766544333 111 0111122 454 443443222 45555666655
Q ss_pred eecCCCCCcccccCCCCcccccceeecccCCCeEEEEEEeecCCccceEEEEEECCCC-CEEEEecccHHHHHHhhhccc
Q 018005 229 WETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGISTTMKLWELGCGG-NWIEVERVPEMMCRKFMSVCY 307 (362)
Q Consensus 229 w~~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~L~vv~~~~~~~~~~~i~vw~l~~~~-~W~~v~~~p~~~~~~~~~~~~ 307 (362)
...+. . .+......... -+|+..++... ....+.+|.++..+ ....+..-.
T Consensus 165 ~~~~~-~-------~~~~~~~~~~s----~dg~~l~~~~~----~~~~~~i~~~~~~~~~~~~~~~~~------------ 216 (297)
T 2ojh_A 165 ETRLT-H-------GEGRNDGPDYS----PDGRWIYFNSS----RTGQMQIWRVRVDGSSVERITDSA------------ 216 (297)
T ss_dssp EEECC-C-------SSSCEEEEEEC----TTSSEEEEEEC----TTSSCEEEEEETTSSCEEECCCCS------------
T ss_pred ceEcc-c-------CCCccccceEC----CCCCEEEEEec----CCCCccEEEECCCCCCcEEEecCC------------
Confidence 54432 1 11211222221 57775555441 23567899887443 344332210
Q ss_pred cCCccEEEEe-eCCEEEEEeec----------CCeEEEEECCCCceEEcC
Q 018005 308 HNYDHVYCFW-HQGMICVCCYT----------WPEILYYNVARRTWHWLP 346 (362)
Q Consensus 308 ~~~~~~~~~~-~~~~i~~~~~~----------~~~v~~yd~~~~~w~~~~ 346 (362)
.......+. .+..|++.... ...+.+||+++++...+.
T Consensus 217 -~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~ 265 (297)
T 2ojh_A 217 -YGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLF 265 (297)
T ss_dssp -EEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEE
T ss_pred -cccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeee
Confidence 000011222 34455554432 245999999998776553
No 145
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=71.65 E-value=66 Score=30.04 Aligned_cols=201 Identities=8% Similarity=0.012 Sum_probs=97.2
Q ss_pred cCCceEEEecCCCCeEEEEeCCcCceee-ccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeC--CCCccccc
Q 018005 108 SSKGLLCFSLPSSSSFLVCNLVTLSSRT-IDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDS--TDQSWSKF 184 (362)
Q Consensus 108 s~~Gll~~~~~~~~~~~v~NP~t~~w~~-lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s--~~~~W~~~ 184 (362)
+-+|.+++....++.+.++|+.|++... ++. .. ....+++.+++. .+++... ...+.+||. .+++ ..
T Consensus 146 ~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~-g~--~~~~v~~spdg~--~l~v~~~---d~~V~v~D~~~~t~~--~~ 215 (543)
T 1nir_A 146 DLPNLFSVTLRDAGQIALVDGDSKKIVKVIDT-GY--AVHISRMSASGR--YLLVIGR---DARIDMIDLWAKEPT--KV 215 (543)
T ss_dssp CGGGEEEEEEGGGTEEEEEETTTCCEEEEEEC-ST--TEEEEEECTTSC--EEEEEET---TSEEEEEETTSSSCE--EE
T ss_pred CCCCEEEEEEcCCCeEEEEECCCceEEEEEec-Cc--ccceEEECCCCC--EEEEECC---CCeEEEEECcCCCCc--EE
Confidence 3456666665556789999999988533 331 11 123344443322 3444332 278999999 5543 22
Q ss_pred ccCCCCccccccCCCcccEEE------CCE-EEEEecCCcEEEEEEcCCCee-ecCCCCCccc--ccCCCCcccccceee
Q 018005 185 DIDGFPSMILSQSSHQEGVFY------KGS-LYFTTPEPFSIVRFDLENGIW-ETPNDANDHM--TMMLPHELTFFRLVN 254 (362)
Q Consensus 185 ~~~~~p~~~~~~~~~~~~v~~------~G~-ly~~~~~~~~i~~~D~~~~~w-~~~~~p~~~~--~~~~p~~~~~~~lv~ 254 (362)
. .++. . .....+.+ +|+ +|..+....++.++|..+.+- ..+....... ..+.|.. .-..++.
T Consensus 216 ~--~i~~----g-~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~-~v~~i~~ 287 (543)
T 1nir_A 216 A--EIKI----G-IEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEP-RVAAIIA 287 (543)
T ss_dssp E--EEEC----C-SEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCC-CEEEEEE
T ss_pred E--EEec----C-CCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCC-ceEEEEE
Confidence 2 1221 0 11122333 464 555444456789999887543 2222110000 0000111 1122332
Q ss_pred cccCCCeEEEEEEeecCCccceEEEEEECCCCCEEEEecccHHHHHHhhhccccCCccEEEEe-eCCEEEEEeecCCeEE
Q 018005 255 DGEESNKLYLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCFW-HQGMICVCCYTWPEIL 333 (362)
Q Consensus 255 ~~~~~G~L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~v~ 333 (362)
. .+|..+++.. .....+.+|.+...+.- .+.+++. +....-.++. .+..+++.....+.|.
T Consensus 288 s--~~~~~~~vs~----~~~g~i~vvd~~~~~~l-~~~~i~~-----------~~~~~~~~~spdg~~l~va~~~~~~v~ 349 (543)
T 1nir_A 288 S--HEHPEFIVNV----KETGKVLLVNYKDIDNL-TVTSIGA-----------APFLHDGGWDSSHRYFMTAANNSNKVA 349 (543)
T ss_dssp C--SSSSEEEEEE----TTTTEEEEEECTTSSSC-EEEEEEC-----------CSSCCCEEECTTSCEEEEEEGGGTEEE
T ss_pred C--CCCCEEEEEE----CCCCeEEEEEecCCCcc-eeEEecc-----------CcCccCceECCCCCEEEEEecCCCeEE
Confidence 1 3455555544 23467888877543331 1222221 0111112232 3445666665567899
Q ss_pred EEECCCCceEE
Q 018005 334 YYNVARRTWHW 344 (362)
Q Consensus 334 ~yd~~~~~w~~ 344 (362)
++|.++++...
T Consensus 350 v~D~~tg~l~~ 360 (543)
T 1nir_A 350 VIDSKDRRLSA 360 (543)
T ss_dssp EEETTTTEEEE
T ss_pred EEECCCCeEEE
Confidence 99999987655
No 146
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=71.59 E-value=51 Score=28.68 Aligned_cols=96 Identities=10% Similarity=-0.022 Sum_probs=47.0
Q ss_pred CCCeEEEEeCCcCceeeccCCCCCC--------------ccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCccccc
Q 018005 119 SSSSFLVCNLVTLSSRTIDFPTYPF--------------DFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKF 184 (362)
Q Consensus 119 ~~~~~~v~NP~t~~w~~lP~~~~~~--------------~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~ 184 (362)
.++.+.+||..+++....-...... ....+.+.+. . .++. ++ ....+.+||..++.-...
T Consensus 169 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~-~~--~~g~i~~~d~~~~~~~~~ 242 (425)
T 1r5m_A 169 VENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDD--D-KFVI-PG--PKGAIFVYQITEKTPTGK 242 (425)
T ss_dssp TTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEET--T-EEEE-EC--GGGCEEEEETTCSSCSEE
T ss_pred cCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCC--C-EEEE-Ec--CCCeEEEEEcCCCceeee
Confidence 3578999999888754432221111 0223334332 1 2332 22 235788999877532111
Q ss_pred ccCCCCccccccCCCcccEEE--CCEEEEEecCCcEEEEEEcCCCe
Q 018005 185 DIDGFPSMILSQSSHQEGVFY--KGSLYFTTPEPFSIVRFDLENGI 228 (362)
Q Consensus 185 ~~~~~p~~~~~~~~~~~~v~~--~G~ly~~~~~~~~i~~~D~~~~~ 228 (362)
- .. .......+.+ +|...+.+.....+..||+.+.+
T Consensus 243 ~----~~----~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~ 280 (425)
T 1r5m_A 243 L----IG----HHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGN 280 (425)
T ss_dssp E----CC----CSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBS
T ss_pred e----cc----CCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCc
Confidence 1 00 0011112222 56655555555578899987653
No 147
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=70.63 E-value=54 Score=28.60 Aligned_cols=189 Identities=13% Similarity=0.126 Sum_probs=89.4
Q ss_pred CCCeEEEEeCCcCceeeccCCC--CCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCc--ccccccCCCCcccc
Q 018005 119 SSSSFLVCNLVTLSSRTIDFPT--YPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQS--WSKFDIDGFPSMIL 194 (362)
Q Consensus 119 ~~~~~~v~NP~t~~w~~lP~~~--~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~--W~~~~~~~~p~~~~ 194 (362)
.++.+.+||..+++....-... .........+...+....+++.++ ....+.+||..... -+... +.
T Consensus 178 ~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs--~D~~v~~wd~~~~~~~~~~~~--~h----- 248 (380)
T 3iz6_a 178 GDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGS--CDTTVRLWDLRITSRAVRTYH--GH----- 248 (380)
T ss_dssp TTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEE--TTSCEEEEETTTTCCCCEEEC--CC-----
T ss_pred CCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEE--CCCeEEEEECCCCCcceEEEC--Cc-----
Confidence 4578999999998865432211 111122222222121223444443 34678999986321 11111 11
Q ss_pred ccCCCcccEEE--CCEEEEEecCCcEEEEEEcCCCeeec-CCCCCcccccCCCCccc-ccceeecccCCCeEEEEEEeec
Q 018005 195 SQSSHQEGVFY--KGSLYFTTPEPFSIVRFDLENGIWET-PNDANDHMTMMLPHELT-FFRLVNDGEESNKLYLIGGVGR 270 (362)
Q Consensus 195 ~~~~~~~~v~~--~G~ly~~~~~~~~i~~~D~~~~~w~~-~~~p~~~~~~~~p~~~~-~~~lv~~~~~~G~L~vv~~~~~ 270 (362)
...-..+.+ +|...+.++...++..+|+.+..-.. +...... ...... -..+... .+|++.+.+.
T Consensus 249 --~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~----~~~~~~~v~~~~~s--~~g~~l~~g~--- 317 (380)
T 3iz6_a 249 --EGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDR----NDNELPIVTSVAFS--ISGRLLFAGY--- 317 (380)
T ss_dssp --SSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSS----SCCSSCSCSEEEEC--SSSSEEEEEC---
T ss_pred --CCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccc----cccccCceEEEEEC--CCCCEEEEEE---
Confidence 011223333 56666666665689999998764322 1111000 000000 1122212 5788877765
Q ss_pred CCccceEEEEEECCCCCEEEEecccHHHHHHhhhccccCCccEEE--EeeCCEEEEEeecCCeEEEEECCCC
Q 018005 271 NGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYC--FWHQGMICVCCYTWPEILYYNVARR 340 (362)
Q Consensus 271 ~~~~~~i~vw~l~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~v~~yd~~~~ 340 (362)
....+.+|++.....-..+..+.. .+...+.+ +..++..++.+...+.+.+||++.+
T Consensus 318 --~dg~i~vwd~~~~~~~~~~~~~~~-----------~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~ 376 (380)
T 3iz6_a 318 --SNGDCYVWDTLLAEMVLNLGTLQN-----------SHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGH 376 (380)
T ss_dssp --TTSCEEEEETTTCCEEEEECCSCS-----------SCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSS
T ss_pred --CCCCEEEEECCCCceEEEEecccC-----------CCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCC
Confidence 247899997743222222222110 11122222 2334445555556678999998865
No 148
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=70.27 E-value=56 Score=28.65 Aligned_cols=221 Identities=10% Similarity=0.025 Sum_probs=101.8
Q ss_pred eeeeeeCCCCCeEeec-CCcCCCCCCce-EEEecCCceEEEecCCCCeEEEEeCCcCceeeccCCCCCCccceEEEEeCC
Q 018005 77 QYPLYDSTHGTWRRLS-LPYSLLLPSAA-TLLSSSKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTP 154 (362)
Q Consensus 77 ~~~~~d~~~~~w~~~~-~~~~~~~~~~~-~~~~s~~Gll~~~~~~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~ 154 (362)
.+.++|...+...... .. ..... .+.-+.+|-.++.+..++.+.+||..+++....-.. .......+.+..
T Consensus 114 ~v~lw~~~~~~~~~~~~~~----~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-~~~~v~~~~~~~-- 186 (401)
T 4aez_A 114 NVYVWNADSGSVSALAETD----ESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAG-HQARVGCLSWNR-- 186 (401)
T ss_dssp EEEEEETTTCCEEEEEECC----TTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECC-CSSCEEEEEEET--
T ss_pred eEEEeeCCCCcEeEeeecC----CCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecC-CCCceEEEEECC--
Confidence 4566777766554432 11 11222 222333553333333457899999988875432221 111222333321
Q ss_pred CceEEEEEeeecCCCeEEEEeCCCCcccccccCCCCccccccCCCcccEEE--CCEEEEEecCCcEEEEEEcCCCeeecC
Q 018005 155 SGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILSQSSHQEGVFY--KGSLYFTTPEPFSIVRFDLENGIWETP 232 (362)
Q Consensus 155 ~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~~~~v~~--~G~ly~~~~~~~~i~~~D~~~~~w~~~ 232 (362)
..++.++ ....+.+||..+..-.... +.. .......+.+ +|...+.++....+..||+.+.+-...
T Consensus 187 ---~~l~~~~--~dg~i~i~d~~~~~~~~~~---~~~----~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~ 254 (401)
T 4aez_A 187 ---HVLSSGS--RSGAIHHHDVRIANHQIGT---LQG----HSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFT 254 (401)
T ss_dssp ---TEEEEEE--TTSEEEEEETTSSSCEEEE---EEC----CSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEE
T ss_pred ---CEEEEEc--CCCCEEEEecccCcceeeE---EcC----CCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEE
Confidence 1333333 3468889998743211111 000 0011122223 566666666656799999987533221
Q ss_pred CCCCcccccCCCCcccccceeecccCCCeEEEEEEeecCCccceEEEEEECCCCCEEEEecccHHHHHHhhhccccCCcc
Q 018005 233 NDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDH 312 (362)
Q Consensus 233 ~~p~~~~~~~~p~~~~~~~lv~~~~~~G~L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~ 312 (362)
... ........... . .++.|++.++. .....+.+|.+.....-..+. .. ..
T Consensus 255 ~~~-------~~~~v~~~~~~-p--~~~~ll~~~~g---s~d~~i~i~d~~~~~~~~~~~-~~---------------~~ 305 (401)
T 4aez_A 255 KTN-------HNAAVKAVAWC-P--WQSNLLATGGG---TMDKQIHFWNAATGARVNTVD-AG---------------SQ 305 (401)
T ss_dssp ECC-------CSSCCCEEEEC-T--TSTTEEEEECC---TTTCEEEEEETTTCCEEEEEE-CS---------------SC
T ss_pred ecC-------CcceEEEEEEC-C--CCCCEEEEecC---CCCCEEEEEECCCCCEEEEEe-CC---------------Cc
Confidence 111 11112222221 1 23456665531 134789999875332211111 10 11
Q ss_pred EEEE--e-eCCEEEEEee-cCCeEEEEECCCCceEEc
Q 018005 313 VYCF--W-HQGMICVCCY-TWPEILYYNVARRTWHWL 345 (362)
Q Consensus 313 ~~~~--~-~~~~i~~~~~-~~~~v~~yd~~~~~w~~~ 345 (362)
+.++ . .+..++...+ ..+.+.+||+++++....
T Consensus 306 v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~ 342 (401)
T 4aez_A 306 VTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQ 342 (401)
T ss_dssp EEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEE
T ss_pred EEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeE
Confidence 2222 2 3344444422 456788888888766554
No 149
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=70.23 E-value=74 Score=30.02 Aligned_cols=200 Identities=8% Similarity=0.008 Sum_probs=95.2
Q ss_pred CceEEEecCCCCeEEEEeCCcCcee-eccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCcccccccCC
Q 018005 110 KGLLCFSLPSSSSFLVCNLVTLSSR-TIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDG 188 (362)
Q Consensus 110 ~Gll~~~~~~~~~~~v~NP~t~~w~-~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~~~~ 188 (362)
++++++....++.+.|+|+.|++-. .++... ....+.+.++++ .+++.. ....+.+||..+.+-+... .
T Consensus 166 ~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~---~p~~v~~SpDGr--~lyv~~---~dg~V~viD~~~~t~~~v~--~ 235 (567)
T 1qks_A 166 ENLFSVTLRDAGQIALIDGSTYEIKTVLDTGY---AVHISRLSASGR--YLFVIG---RDGKVNMIDLWMKEPTTVA--E 235 (567)
T ss_dssp GGEEEEEETTTTEEEEEETTTCCEEEEEECSS---CEEEEEECTTSC--EEEEEE---TTSEEEEEETTSSSCCEEE--E
T ss_pred CceEEEEeCCCCeEEEEECCCCeEEEEEeCCC---CccceEECCCCC--EEEEEc---CCCeEEEEECCCCCCcEeE--E
Confidence 3466666656789999999998754 344221 122444444332 344332 2458999998522223333 2
Q ss_pred CCccccccCCCcccE-EE-----CC-EEEEEecCCcEEEEEEcCCCeee-cCCCCCcccc--cCCCCcccccceeecccC
Q 018005 189 FPSMILSQSSHQEGV-FY-----KG-SLYFTTPEPFSIVRFDLENGIWE-TPNDANDHMT--MMLPHELTFFRLVNDGEE 258 (362)
Q Consensus 189 ~p~~~~~~~~~~~~v-~~-----~G-~ly~~~~~~~~i~~~D~~~~~w~-~~~~p~~~~~--~~~p~~~~~~~lv~~~~~ 258 (362)
++. . .....+ +. +| .+|..+.....+.++|..+.+-. .+.......+ .+.|.. +...++.. .
T Consensus 236 i~~----G-~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~-rva~i~~s--~ 307 (567)
T 1qks_A 236 IKI----G-SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEP-RVAAILAS--H 307 (567)
T ss_dssp EEC----C-SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCC-CEEEEEEC--S
T ss_pred Eec----C-CCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCC-ceEEEEEc--C
Confidence 222 1 112233 33 46 56666666668899998775332 2221110000 000111 11123311 3
Q ss_pred CCeEEEEEEeecCCccceEEEEEECCCC-CEEEEecccHHHHHHhhhccccCCccEEEEe-eCCEEEEEeecCCeEEEEE
Q 018005 259 SNKLYLIGGVGRNGISTTMKLWELGCGG-NWIEVERVPEMMCRKFMSVCYHNYDHVYCFW-HQGMICVCCYTWPEILYYN 336 (362)
Q Consensus 259 ~G~L~vv~~~~~~~~~~~i~vw~l~~~~-~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~v~~yd 336 (362)
++..+++.. .....+.+. +-.. ....+..++. .....-..+. .+..+++.....+.|.++|
T Consensus 308 ~~~~~vv~~----~~~g~v~~v--d~~~~~~~~v~~i~~-----------~~~~~d~~~~pdgr~~~va~~~sn~V~ViD 370 (567)
T 1qks_A 308 YRPEFIVNV----KETGKILLV--DYTDLNNLKTTEISA-----------ERFLHDGGLDGSHRYFITAANARNKLVVID 370 (567)
T ss_dssp SSSEEEEEE----TTTTEEEEE--ETTCSSEEEEEEEEC-----------CSSEEEEEECTTSCEEEEEEGGGTEEEEEE
T ss_pred CCCEEEEEe----cCCCeEEEE--ecCCCccceeeeeec-----------cccccCceECCCCCEEEEEeCCCCeEEEEE
Confidence 445555543 122343333 3222 2444544421 0111111222 3445666666678899999
Q ss_pred CCCCceEE
Q 018005 337 VARRTWHW 344 (362)
Q Consensus 337 ~~~~~w~~ 344 (362)
.++++-..
T Consensus 371 ~~t~kl~~ 378 (567)
T 1qks_A 371 TKEGKLVA 378 (567)
T ss_dssp TTTTEEEE
T ss_pred CCCCcEEE
Confidence 99987554
No 150
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=70.10 E-value=78 Score=30.23 Aligned_cols=194 Identities=13% Similarity=-0.011 Sum_probs=0.0
Q ss_pred EecCCceEEEecCCCCeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCcccccc
Q 018005 106 LSSSKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFD 185 (362)
Q Consensus 106 ~~s~~Gll~~~~~~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~ 185 (362)
+...+|.||+.....+.+..+++........-....-..-.+++++..++ ++++... ....+++++.....=+...
T Consensus 47 ~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~--~ly~~d~--~~~~I~v~~~dG~~~~~l~ 122 (619)
T 3s94_A 47 FVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGE--KLYWTDS--ETNRIEVSNLDGSLRKVLF 122 (619)
T ss_dssp EETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTT--EEEEEET--TTTEEEEEETTSCSCEEEE
T ss_pred EEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCC--EEEEEeC--CCCEEEEEECCCCCEEEEE
Q ss_pred cCCCCccccccCCCcccEEE---CCEEEEEecC-CcEEEEEEcCCCeeecCCCCCcccccCCCCcccccceeecccCCCe
Q 018005 186 IDGFPSMILSQSSHQEGVFY---KGSLYFTTPE-PFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNK 261 (362)
Q Consensus 186 ~~~~p~~~~~~~~~~~~v~~---~G~ly~~~~~-~~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~ 261 (362)
.-.. ....++++ +|.+||.... ...|...+++...-..+... --..-....+-. .+++
T Consensus 123 --~~~l------~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~-------~~~~P~Glald~---~~~~ 184 (619)
T 3s94_A 123 --WQEL------DQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINS-------EIYWPNGLTLDY---EEQK 184 (619)
T ss_dssp --CSSC------SCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECS-------SCSSEEEEEEET---TTTE
T ss_pred --eCCC------CCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeC-------CCCCCcEEEEEc---cCCE
Q ss_pred EEEEEEeecCCccceEEEEEECCCCCEEEEe-cccHHHHHHhhhccccCCccEEEEeeCCEEEEEeecCCeEEEEECCCC
Q 018005 262 LYLIGGVGRNGISTTMKLWELGCGGNWIEVE-RVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYTWPEILYYNVARR 340 (362)
Q Consensus 262 L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~v~~yd~~~~ 340 (362)
||++.. ....|++..++.......+. .++ .++.....++.||+.....+.|...|..++
T Consensus 185 LY~aD~-----~~~~I~~~~~dG~~~~~~~~~~~~---------------~P~gi~~~~~~ly~td~~~~~V~~~d~~tg 244 (619)
T 3s94_A 185 LYWADA-----KLNFIHKSNLDGTNRQAVVKGSLP---------------HPFALTLFEDILYWTDWSTHSILACNKYTG 244 (619)
T ss_dssp EEEEET-----TTCCEEEESSSCCEEC------------------------CCCEEESSSEEEEECTTTCSEEEEESSSC
T ss_pred EEEEeC-----CCCeEEEecCCCCccEEEEeCCCC---------------CceEEEEeCCEEEEecCCCCEEEEEECCCC
Q ss_pred c
Q 018005 341 T 341 (362)
Q Consensus 341 ~ 341 (362)
+
T Consensus 245 ~ 245 (619)
T 3s94_A 245 E 245 (619)
T ss_dssp C
T ss_pred c
No 151
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=69.75 E-value=51 Score=28.00 Aligned_cols=186 Identities=10% Similarity=0.045 Sum_probs=89.5
Q ss_pred ecCCceEEEecCCCCeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCccccccc
Q 018005 107 SSSKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDI 186 (362)
Q Consensus 107 ~s~~Gll~~~~~~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~~ 186 (362)
-+-+|-.++.+...+.+.+||..+++-...-.. .......+++.+.+ +.++.++ ....+.+||..+++=...
T Consensus 130 ~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~-~~~~v~~~~~spdg---~~lasg~--~dg~i~iwd~~~~~~~~~-- 201 (321)
T 3ow8_A 130 FSPDSQYLATGTHVGKVNIFGVESGKKEYSLDT-RGKFILSIAYSPDG---KYLASGA--IDGIINIFDIATGKLLHT-- 201 (321)
T ss_dssp ECTTSSEEEEECTTSEEEEEETTTCSEEEEEEC-SSSCEEEEEECTTS---SEEEEEE--TTSCEEEEETTTTEEEEE--
T ss_pred ECCCCCEEEEEcCCCcEEEEEcCCCceeEEecC-CCceEEEEEECCCC---CEEEEEc--CCCeEEEEECCCCcEEEE--
Confidence 344553333444467889999888764321111 11112234444332 3344443 345789999887642111
Q ss_pred CCCCccccccCCCcccEEE--CCEEEEEecCCcEEEEEEcCCCeeecCCCCCcccccCCCCcccccceeecccCCCeEEE
Q 018005 187 DGFPSMILSQSSHQEGVFY--KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYL 264 (362)
Q Consensus 187 ~~~p~~~~~~~~~~~~v~~--~G~ly~~~~~~~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~L~v 264 (362)
+.. ....-..+.+ +|.+.+.+.....|..||+.+......... ...... .+... -+|++++
T Consensus 202 --~~~----h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~-------h~~~v~--~~~~s--p~~~~l~ 264 (321)
T 3ow8_A 202 --LEG----HAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSG-------HASWVL--NVAFC--PDDTHFV 264 (321)
T ss_dssp --ECC----CSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECC-------CSSCEE--EEEEC--TTSSEEE
T ss_pred --Ecc----cCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcC-------CCCceE--EEEEC--CCCCEEE
Confidence 110 0011123333 566666666656799999987544321101 111111 22211 4677766
Q ss_pred EEEeecCCccceEEEEEECCCCCEEEEecccHHHHHHhhhccccCCccEEEE--eeCCEEEEEeecCCeEEEEEC
Q 018005 265 IGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCF--WHQGMICVCCYTWPEILYYNV 337 (362)
Q Consensus 265 v~~~~~~~~~~~i~vw~l~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~v~~yd~ 337 (362)
.++ ...++.+|++.. + +.+..+. .....+.++ ..++..++.....+.|.+||.
T Consensus 265 s~s-----~D~~v~iwd~~~-~--~~~~~~~------------~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 265 SSS-----SDKSVKVWDVGT-R--TCVHTFF------------DHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDC 319 (321)
T ss_dssp EEE-----TTSCEEEEETTT-T--EEEEEEC------------CCSSCEEEEEECTTSSEEEEEETTCCEEEEEC
T ss_pred EEe-----CCCcEEEEeCCC-C--EEEEEEc------------CCCCcEEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence 665 236899998742 2 2333321 111223332 223334455555677888885
No 152
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=69.72 E-value=45 Score=27.34 Aligned_cols=111 Identities=5% Similarity=-0.062 Sum_probs=61.1
Q ss_pred EecCCceEEEecCCCCeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCcccccc
Q 018005 106 LSSSKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFD 185 (362)
Q Consensus 106 ~~s~~Gll~~~~~~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~ 185 (362)
+...+|.+++.....+.+.++++.......+-.... ..-.++++++.. -++++.........+++++.....=+...
T Consensus 86 ~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~-~~P~~i~vd~~~--g~lyv~~~~~~~~~I~~~~~dg~~~~~~~ 162 (267)
T 1npe_A 86 LDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGL-VNPRGIVTDPVR--GNLYWTDWNRDNPKIETSHMDGTNRRILA 162 (267)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSC-SSEEEEEEETTT--TEEEEEECCSSSCEEEEEETTSCCCEEEE
T ss_pred EEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCC-CCccEEEEeeCC--CEEEEEECCCCCcEEEEEecCCCCcEEEE
Confidence 444577888776656789999987654333322111 111244555322 25555443222357778877543222221
Q ss_pred cCCCCccccccCCCcccEEE---CCEEEEEecCCcEEEEEEcCCC
Q 018005 186 IDGFPSMILSQSSHQEGVFY---KGSLYFTTPEPFSIVRFDLENG 227 (362)
Q Consensus 186 ~~~~p~~~~~~~~~~~~v~~---~G~ly~~~~~~~~i~~~D~~~~ 227 (362)
.. .+ ....++.+ ++.+||.......|.+||++..
T Consensus 163 --~~---~~---~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~ 199 (267)
T 1npe_A 163 --QD---NL---GLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQP 199 (267)
T ss_dssp --CT---TC---SCEEEEEEETTTTEEEEEETTTTEEEEEETTEE
T ss_pred --EC---CC---CCCcEEEEcCCCCEEEEEECCCCEEEEEecCCC
Confidence 00 01 12344555 4789999887778999999864
No 153
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=69.62 E-value=55 Score=28.30 Aligned_cols=176 Identities=7% Similarity=-0.048 Sum_probs=85.3
Q ss_pred eeeeeeCCCCCeEee-cCCcCCCCCCceEEEe-cC-CceEEEecCCCCeEEEEeCCcCceeeccCCCC-CCccceEEEEe
Q 018005 77 QYPLYDSTHGTWRRL-SLPYSLLLPSAATLLS-SS-KGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTY-PFDFELLTLVS 152 (362)
Q Consensus 77 ~~~~~d~~~~~w~~~-~~~~~~~~~~~~~~~~-s~-~Gll~~~~~~~~~~~v~NP~t~~w~~lP~~~~-~~~~~~~~~~~ 152 (362)
.+.+||...+..... ... ........++ +- +|-.++.+..++.+.+||..++....+..... ......+++.+
T Consensus 97 ~i~iwd~~~~~~~~~~~~~---~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~ 173 (383)
T 3ei3_B 97 DIILWDYDVQNKTSFIQGM---GPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSV 173 (383)
T ss_dssp CEEEEETTSTTCEEEECCC---STTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSCEEEEEECCCCSSCCEEEEEEET
T ss_pred eEEEEeCCCcccceeeecC---CcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCceEEEeccCCCCCCeEEEEECC
Confidence 356677766554433 211 0112222222 22 44333444446789999999877665543321 12233445544
Q ss_pred CCCceEEEEEeeecCCCeEEEEeCCCCcccccccCCCCccccccCCCcccEEE--CCE-EEEEecCCcEEEEEEcCCC--
Q 018005 153 TPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILSQSSHQEGVFY--KGS-LYFTTPEPFSIVRFDLENG-- 227 (362)
Q Consensus 153 ~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~~~~v~~--~G~-ly~~~~~~~~i~~~D~~~~-- 227 (362)
.+. .++.++ ....+.+||.....-.... ... .....+.+ +|. +.+.++....+..||+.+.
T Consensus 174 ~~~---~l~~~~--~d~~i~i~d~~~~~~~~~~--~h~-------~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~ 239 (383)
T 3ei3_B 174 SRQ---MLATGD--STGRLLLLGLDGHEIFKEK--LHK-------AKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKD 239 (383)
T ss_dssp TTT---EEEEEE--TTSEEEEEETTSCEEEEEE--CSS-------SCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCS
T ss_pred CCC---EEEEEC--CCCCEEEEECCCCEEEEec--cCC-------CcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCc
Confidence 332 333333 3468899998533222221 110 11122333 354 5555555568999999862
Q ss_pred --eeecCCCCCcccccCCCCcccccceeecccC-CCeEEEEEEeecCCccceEEEEEECCCC
Q 018005 228 --IWETPNDANDHMTMMLPHELTFFRLVNDGEE-SNKLYLIGGVGRNGISTTMKLWELGCGG 286 (362)
Q Consensus 228 --~w~~~~~p~~~~~~~~p~~~~~~~lv~~~~~-~G~L~vv~~~~~~~~~~~i~vw~l~~~~ 286 (362)
...... . ........... - +|++++++.. ...+.+|++....
T Consensus 240 ~~~~~~~~-~-------~~~~v~~~~~s----~~~~~~l~~~~~-----d~~i~iwd~~~~~ 284 (383)
T 3ei3_B 240 KNSYIAEM-P-------HEKPVNAAYFN----PTDSTKLLTTDQ-----RNEIRVYSSYDWS 284 (383)
T ss_dssp TTCEEEEE-E-------CSSCEEEEEEC----TTTSCEEEEEES-----SSEEEEEETTBTT
T ss_pred ccceEEEe-c-------CCCceEEEEEc----CCCCCEEEEEcC-----CCcEEEEECCCCc
Confidence 221110 1 11111122221 3 7787777652 3789999886443
No 154
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=69.43 E-value=40 Score=32.72 Aligned_cols=117 Identities=13% Similarity=0.150 Sum_probs=62.8
Q ss_pred cccEEECCEEEEEecCCcEEEEEEcCC--CeeecCCCCCcccccCCCCc--------ccccceeecccCCCeEEEEEEee
Q 018005 200 QEGVFYKGSLYFTTPEPFSIVRFDLEN--GIWETPNDANDHMTMMLPHE--------LTFFRLVNDGEESNKLYLIGGVG 269 (362)
Q Consensus 200 ~~~v~~~G~ly~~~~~~~~i~~~D~~~--~~w~~~~~p~~~~~~~~p~~--------~~~~~lv~~~~~~G~L~vv~~~~ 269 (362)
..+++.+|.+|+.+... .+.++|.++ ..|+.- .. .+.. .....++. .+|+||+...
T Consensus 64 ~~P~v~~g~vyv~~~~~-~v~AlD~~tG~~~W~~~-~~-------~~~~~~~~~~~~~~~~~~~~---~~g~v~v~~~-- 129 (689)
T 1yiq_A 64 ATPIVVDGVMYTTGPFS-VVYALDARDGRLIWKYD-PQ-------SDRHRAGEACCDAVNRGVAV---WKGKVYVGVL-- 129 (689)
T ss_dssp CCCEEETTEEEEECGGG-CEEEEETTTCCEEEEEC-CC-------CCGGGGGGCTTCSCCCCCEE---ETTEEEEECT--
T ss_pred ecCEEECCEEEEEcCCC-eEEEEECCCCceeEEEc-CC-------CCccccccccccCCCCccEE---ECCEEEEEcc--
Confidence 45678899999876543 699999875 478752 12 1110 01122332 5777776542
Q ss_pred cCCccceEEEEEECCCCC--EEEEecccHHHHHHhhhccccCCccEEEEeeCCEEEEEeec-----CCeEEEEECCCCc-
Q 018005 270 RNGISTTMKLWELGCGGN--WIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYT-----WPEILYYNVARRT- 341 (362)
Q Consensus 270 ~~~~~~~i~vw~l~~~~~--W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-----~~~v~~yd~~~~~- 341 (362)
...+..++.+ +++ |+.-...+... ... ..... +..++.||+.... .+.+.+||.++++
T Consensus 130 ----dg~l~AlDa~-TG~~~W~~~~~~~~~~---~~~---~~~sP---~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~ 195 (689)
T 1yiq_A 130 ----DGRLEAIDAK-TGQRAWSVDTRADHKR---SYT---ITGAP---RVVNGKVVIGNGGAEFGVRGYVTAYDAETGKE 195 (689)
T ss_dssp ----TSEEEEEETT-TCCEEEEEECCSCTTS---CCB---CCSCC---EEETTEEEECCBCTTTCCBCEEEEEETTTCCE
T ss_pred ----CCEEEEEECC-CCCEeeeecCcCCCCC---Ccc---ccCCc---EEECCEEEEEeCCCccCCCCEEEEEECCCCcE
Confidence 2444445442 333 88643211000 000 00111 2346778775432 3579999999985
Q ss_pred -eEE
Q 018005 342 -WHW 344 (362)
Q Consensus 342 -w~~ 344 (362)
|+.
T Consensus 196 ~W~~ 199 (689)
T 1yiq_A 196 AWRF 199 (689)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 665
No 155
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=68.98 E-value=62 Score=28.62 Aligned_cols=178 Identities=8% Similarity=-0.060 Sum_probs=89.4
Q ss_pred CeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCcccccccCCCCccccccCCCc
Q 018005 121 SSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILSQSSHQ 200 (362)
Q Consensus 121 ~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~~ 200 (362)
..+...++.+++...+.... ....+++++.. .-+|++... ....+..++..+...+... .. .+ ...
T Consensus 96 ~~I~~i~~~~~~~~~~~~~~--~~~~gl~~d~~--~~~ly~~D~--~~~~I~r~~~~g~~~~~~~--~~---~~---~~p 161 (386)
T 3v65_B 96 IDIRQVLPHRSEYTLLLNNL--ENAIALDFHHR--RELVFWSDV--TLDRILRANLNGSNVEEVV--ST---GL---ESP 161 (386)
T ss_dssp SCEEEECTTSCCCEEEECSC--SCEEEEEEETT--TTEEEEEET--TTTEEEEEETTSCCEEEEE--CS---SC---SCC
T ss_pred ccceeeccCCCcEEEEecCC--CccEEEEEecC--CCeEEEEeC--CCCcEEEEecCCCCcEEEE--eC---CC---CCc
Confidence 45666777766654443211 11234444422 225666543 3457888888766544332 10 01 122
Q ss_pred ccEEE---CCEEEEEecCCcEEEEEEcCCCeeecCCCCCcccccCCCCcccccceeecccCCCeEEEEEEeecCCccceE
Q 018005 201 EGVFY---KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGISTTM 277 (362)
Q Consensus 201 ~~v~~---~G~ly~~~~~~~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~L~vv~~~~~~~~~~~i 277 (362)
.++.+ +|.+||.......|.++|++...-..+.... + ..|. .+++. -.+|.||+.... ....|
T Consensus 162 ~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~--l--~~P~-----giavd-p~~g~ly~td~~----~~~~I 227 (386)
T 3v65_B 162 GGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQS--L--EKPR-----AIALH-PMEGTIYWTDWG----NTPRI 227 (386)
T ss_dssp CCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSS--C--SCEE-----EEEEE-TTTTEEEEEECS----SSCEE
T ss_pred cEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCC--C--CCCc-----EEEEE-cCCCeEEEeccC----CCCEE
Confidence 34444 5899999877778999998754322221010 0 0122 23321 146888888641 12444
Q ss_pred EEEEECCCCC--EEEEecccHHHHHHhhhccccCCccEEEEe-eCCEEEEEeecCCeEEEEECCCCc
Q 018005 278 KLWELGCGGN--WIEVERVPEMMCRKFMSVCYHNYDHVYCFW-HQGMICVCCYTWPEILYYNVARRT 341 (362)
Q Consensus 278 ~vw~l~~~~~--W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~v~~yd~~~~~ 341 (362)
.+. +.+++ -..+..- + ....-.++. .++.||+.......|.++|++...
T Consensus 228 ~r~--~~dG~~~~~~~~~~-------~------~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~ 279 (386)
T 3v65_B 228 EAS--SMDGSGRRIIADTH-------L------FWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSH 279 (386)
T ss_dssp EEE--ETTSCSCEEEECSS-------C------SCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCS
T ss_pred EEE--eCCCCCcEEEEECC-------C------CCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCe
Confidence 444 44443 2222110 0 011112222 467888887667788888887543
No 156
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=68.82 E-value=60 Score=28.40 Aligned_cols=107 Identities=10% Similarity=0.012 Sum_probs=54.7
Q ss_pred cCCceEEEecCCCCeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCccc-cccc
Q 018005 108 SSKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWS-KFDI 186 (362)
Q Consensus 108 s~~Gll~~~~~~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~-~~~~ 186 (362)
+.+|-.++.+..++.+.+||..+++-...-.. .......+.+.+.+ +.++.++ ....+.+||..++.=. ...
T Consensus 106 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-h~~~v~~~~~~~~~---~~l~s~s--~d~~i~iwd~~~~~~~~~~~- 178 (420)
T 3vl1_A 106 KLQMRRFILGTTEGDIKVLDSNFNLQREIDQA-HVSEITKLKFFPSG---EALISSS--QDMQLKIWSVKDGSNPRTLI- 178 (420)
T ss_dssp CSSSCEEEEEETTSCEEEECTTSCEEEEETTS-SSSCEEEEEECTTS---SEEEEEE--TTSEEEEEETTTCCCCEEEE-
T ss_pred ecCCCEEEEEECCCCEEEEeCCCcceeeeccc-ccCccEEEEECCCC---CEEEEEe--CCCeEEEEeCCCCcCceEEc-
Confidence 44553333333467899999988876554221 11223344454332 2333333 3458999998765311 111
Q ss_pred CCCCccccccCCCcccEEE--CCEEEEEecCCcEEEEEEcCCCee
Q 018005 187 DGFPSMILSQSSHQEGVFY--KGSLYFTTPEPFSIVRFDLENGIW 229 (362)
Q Consensus 187 ~~~p~~~~~~~~~~~~v~~--~G~ly~~~~~~~~i~~~D~~~~~w 229 (362)
... ..-..+.+ +|...+.+.....+..+|+.+.+-
T Consensus 179 -~h~-------~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~ 215 (420)
T 3vl1_A 179 -GHR-------ATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTT 215 (420)
T ss_dssp -CCS-------SCEEEEEEETTTTEEEEEETTSCEEEEETTTTEE
T ss_pred -CCC-------CcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCce
Confidence 000 11112222 465555555555788999987643
No 157
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=68.28 E-value=64 Score=28.52 Aligned_cols=107 Identities=12% Similarity=0.171 Sum_probs=54.8
Q ss_pred CEEEEEecCCcEEEEEEcCCCeee-cCCCCCcccccCCCCcccccceeecccCCCeEEEEEEeecCCccceEEEEEECCC
Q 018005 207 GSLYFTTPEPFSIVRFDLENGIWE-TPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGISTTMKLWELGCG 285 (362)
Q Consensus 207 G~ly~~~~~~~~i~~~D~~~~~w~-~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~L~vv~~~~~~~~~~~i~vw~l~~~ 285 (362)
|.+.+.+.....|..||+.+.+-. .+..+ +....-..+... -+|++++.+. ....+.+|++..
T Consensus 182 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~--------~h~~~v~~~~~s--~~~~~l~s~~-----~dg~i~iwd~~~- 245 (437)
T 3gre_A 182 KSLLVALTNLSRVIIFDIRTLERLQIIENS--------PRHGAVSSICID--EECCVLILGT-----TRGIIDIWDIRF- 245 (437)
T ss_dssp CEEEEEEETTSEEEEEETTTCCEEEEEECC--------GGGCCEEEEEEC--TTSCEEEEEE-----TTSCEEEEETTT-
T ss_pred CCEEEEEeCCCeEEEEeCCCCeeeEEEccC--------CCCCceEEEEEC--CCCCEEEEEc-----CCCeEEEEEcCC-
Confidence 666666666668999999875432 22211 011111222211 4677777766 236799998853
Q ss_pred CCEEEEecccHHHHHHhhhccccCCccEEEE----e--eCCEEEEEeecCCeEEEEECCCCce
Q 018005 286 GNWIEVERVPEMMCRKFMSVCYHNYDHVYCF----W--HQGMICVCCYTWPEILYYNVARRTW 342 (362)
Q Consensus 286 ~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~----~--~~~~i~~~~~~~~~v~~yd~~~~~w 342 (362)
+.-.....++ ....+.++ . .++.+++.+...+.|.+||+++++-
T Consensus 246 ~~~~~~~~~~-------------~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~ 295 (437)
T 3gre_A 246 NVLIRSWSFG-------------DHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHC 295 (437)
T ss_dssp TEEEEEEBCT-------------TCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEE
T ss_pred ccEEEEEecC-------------CCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcE
Confidence 3222111111 11122222 1 2344455454455789999987753
No 158
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=68.22 E-value=59 Score=28.09 Aligned_cols=190 Identities=8% Similarity=-0.024 Sum_probs=88.6
Q ss_pred cCCceEEEecCCCCeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCcccccccC
Q 018005 108 SSKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDID 187 (362)
Q Consensus 108 s~~Gll~~~~~~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~~~ 187 (362)
+-+|-.++.+..++.+.+||..+++-...-.. .......+.+...+. .+++.++ ....+.+||..+++-...-
T Consensus 136 spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~-h~~~V~~~~~~~~~~--~~l~s~s--~D~~v~iwd~~~~~~~~~~-- 208 (344)
T 4gqb_B 136 LSSGTQAVSGSKDICIKVWDLAQQVVLSSYRA-HAAQVTCVAASPHKD--SVFLSCS--EDNRILLWDTRCPKPASQI-- 208 (344)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEECSSCT--TEEEEEE--TTSCEEEEETTSSSCEEEC--
T ss_pred CCCCCEEEEEeCCCeEEEEECCCCcEEEEEcC-cCCceEEEEecCCCC--Cceeeec--cccccccccccccceeeee--
Confidence 44564444444467899999999875432211 111222344433322 2333333 3457899998876432211
Q ss_pred CCCccccccCCCcccEEE---CCEEEEEecCCcEEEEEEcCCCeee-cCCCCCcccccCCCCcccccceeecccCCC-eE
Q 018005 188 GFPSMILSQSSHQEGVFY---KGSLYFTTPEPFSIVRFDLENGIWE-TPNDANDHMTMMLPHELTFFRLVNDGEESN-KL 262 (362)
Q Consensus 188 ~~p~~~~~~~~~~~~v~~---~G~ly~~~~~~~~i~~~D~~~~~w~-~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G-~L 262 (362)
.... .......+.. ++.+.+.+.....|..||+.+.+-. .+.. ..... ..+... -+| ++
T Consensus 209 ~~~~----~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~--------h~~~v--~~v~fs--p~g~~~ 272 (344)
T 4gqb_B 209 GCSA----PGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAV--------HSQCV--TGLVFS--PHSVPF 272 (344)
T ss_dssp C--------CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEEC--------CSSCE--EEEEEC--SSSSCC
T ss_pred ecce----eeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcC--------CCCCE--EEEEEc--cCCCeE
Confidence 0110 0011122322 3455555655567889999865321 1110 11111 122211 345 34
Q ss_pred EEEEEeecCCccceEEEEEECCCCCEEEEecccHHHHHHhhhccccCCccEEEEe---eCCEEEEEeecCCeEEEEECCC
Q 018005 263 YLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCFW---HQGMICVCCYTWPEILYYNVAR 339 (362)
Q Consensus 263 ~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~~~~~~~~v~~yd~~~ 339 (362)
++.+. ...++.||++. .+. .+... ++...+.++. .+..+++.....+.|.+|++.+
T Consensus 273 lasgs-----~D~~i~vwd~~-~~~--~~~~~-------------~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~ 331 (344)
T 4gqb_B 273 LASLS-----EDCSLAVLDSS-LSE--LFRSQ-------------AHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPT 331 (344)
T ss_dssp EEEEE-----TTSCEEEECTT-CCE--EEEEC-------------CCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC
T ss_pred EEEEe-----CCCeEEEEECC-CCc--EEEEc-------------CCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCC
Confidence 44444 23678999653 221 11111 1222344332 3445666665677899999987
Q ss_pred Cc
Q 018005 340 RT 341 (362)
Q Consensus 340 ~~ 341 (362)
..
T Consensus 332 ~~ 333 (344)
T 4gqb_B 332 EP 333 (344)
T ss_dssp --
T ss_pred CC
Confidence 53
No 159
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=68.20 E-value=56 Score=27.89 Aligned_cols=191 Identities=10% Similarity=0.056 Sum_probs=88.0
Q ss_pred cCCceEEEecCCCCeEEEEeCCcCce--eeccCC-CCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCccccc
Q 018005 108 SSKGLLCFSLPSSSSFLVCNLVTLSS--RTIDFP-TYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKF 184 (362)
Q Consensus 108 s~~Gll~~~~~~~~~~~v~NP~t~~w--~~lP~~-~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~ 184 (362)
+.+|-.++.+..++.+.+||..+++- ...... ........+.+.+.+ +++. ++ ....+.+||..++.-...
T Consensus 106 s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~---~l~s-~s--~d~~i~~wd~~~~~~~~~ 179 (340)
T 1got_B 106 APSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDN---QIVT-SS--GDTTCALWDIETGQQTTT 179 (340)
T ss_dssp CTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETT---EEEE-EE--TTSCEEEEETTTTEEEEE
T ss_pred CCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCC---cEEE-EE--CCCcEEEEECCCCcEEEE
Confidence 34453333443467899999887642 111000 111111222333321 3333 22 345789999887643211
Q ss_pred ccCCCCccccccCCCcccEEE--CCEEEEEecCCcEEEEEEcCCCeeecCCCCCcccccCCCCcccccceeecccCCCeE
Q 018005 185 DIDGFPSMILSQSSHQEGVFY--KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKL 262 (362)
Q Consensus 185 ~~~~~p~~~~~~~~~~~~v~~--~G~ly~~~~~~~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~L 262 (362)
-. +.. .....+.+ +|.+.+.++....+..+|+.+..-...... .......... . -+|++
T Consensus 180 ~~-~h~-------~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~-------h~~~v~~v~~--~--p~~~~ 240 (340)
T 1got_B 180 FT-GHT-------GDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTG-------HESDINAICF--F--PNGNA 240 (340)
T ss_dssp EC-CCS-------SCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECC-------CSSCEEEEEE--C--TTSSE
T ss_pred Ec-CCC-------CceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcC-------CcCCEEEEEE--c--CCCCE
Confidence 10 100 11112222 466666666656789999987543221101 1111112122 1 46777
Q ss_pred EEEEEeecCCccceEEEEEECCCCCEEEEecccHHHHHHhhhccccCCccEEE--EeeCCEEEEEeecCCeEEEEECCCC
Q 018005 263 YLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYC--FWHQGMICVCCYTWPEILYYNVARR 340 (362)
Q Consensus 263 ~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~v~~yd~~~~ 340 (362)
++.+. ...++.+|++..... +..+... .....+.+ +..++.+++.+...+.+.+||..+.
T Consensus 241 l~s~s-----~d~~v~iwd~~~~~~---~~~~~~~----------~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~ 302 (340)
T 1got_B 241 FATGS-----DDATCRLFDLRADQE---LMTYSHD----------NIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKA 302 (340)
T ss_dssp EEEEE-----TTSCEEEEETTTTEE---EEEECCT----------TCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred EEEEc-----CCCcEEEEECCCCcE---EEEEccC----------CcccceEEEEECCCCCEEEEECCCCeEEEEEcccC
Confidence 77765 237899998753221 1111100 00011222 2233444555555667888887765
Q ss_pred c
Q 018005 341 T 341 (362)
Q Consensus 341 ~ 341 (362)
+
T Consensus 303 ~ 303 (340)
T 1got_B 303 D 303 (340)
T ss_dssp C
T ss_pred c
Confidence 3
No 160
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=67.96 E-value=52 Score=27.42 Aligned_cols=28 Identities=7% Similarity=0.101 Sum_probs=18.7
Q ss_pred CEEEEEeecCCeEEEEECCCC-ceEEcCC
Q 018005 320 GMICVCCYTWPEILYYNVARR-TWHWLPS 347 (362)
Q Consensus 320 ~~i~~~~~~~~~v~~yd~~~~-~w~~~~~ 347 (362)
+..++.....+.|.+||++++ .|+.+..
T Consensus 318 ~~~l~s~~~dg~v~iw~~~~~~~~~~~~~ 346 (351)
T 3f3f_A 318 GTILSSAGDDGKVRLWKATYSNEFKCMSV 346 (351)
T ss_dssp SCCEEEEETTSCEEEEEECTTSCEEEEEE
T ss_pred CCEEEEecCCCcEEEEecCcCcchhheee
Confidence 344444555678999999985 6666543
No 161
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=67.88 E-value=58 Score=27.92 Aligned_cols=240 Identities=13% Similarity=0.028 Sum_probs=106.9
Q ss_pred eeeeeCCCCCeEeecCCcCCCCCCceEEEecCCc-eEEEecC---CCCeEEE--EeCCcCceeeccCCCC-CCccceEEE
Q 018005 78 YPLYDSTHGTWRRLSLPYSLLLPSAATLLSSSKG-LLCFSLP---SSSSFLV--CNLVTLSSRTIDFPTY-PFDFELLTL 150 (362)
Q Consensus 78 ~~~~d~~~~~w~~~~~~~~~~~~~~~~~~~s~~G-ll~~~~~---~~~~~~v--~NP~t~~w~~lP~~~~-~~~~~~~~~ 150 (362)
++.+|+..+....+... . ......+..+-+| .|++... ..+.+.+ .++.|++...+..... ......+++
T Consensus 31 ~~~~d~~~g~~~~~~~~-~--~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~ 107 (361)
T 3scy_A 31 TFRFNEETGESLPLSDA-E--VANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT 107 (361)
T ss_dssp EEEEETTTCCEEEEEEE-E--CSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE
T ss_pred EEEEeCCCCCEEEeecc-c--CCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE
Confidence 34457777766554311 1 1111223334445 5555543 2345554 4666677665543321 111223333
Q ss_pred EeCCCceEEEEEeeecCCCeEEEEeCCCC-ccccccc-CCCCc-cccc---cCCCcccEEE--CCE-EEEEecCCcEEEE
Q 018005 151 VSTPSGYKIFMLFAKSFPNYAFVYDSTDQ-SWSKFDI-DGFPS-MILS---QSSHQEGVFY--KGS-LYFTTPEPFSIVR 221 (362)
Q Consensus 151 ~~~~~~ykv~~~~~~~~~~~~~vy~s~~~-~W~~~~~-~~~p~-~~~~---~~~~~~~v~~--~G~-ly~~~~~~~~i~~ 221 (362)
... .+++... ....+.+|+..++ .-..... ..... ...+ .......+.+ +|+ +|+.......+.+
T Consensus 108 ---dg~-~l~~~~~--~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v 181 (361)
T 3scy_A 108 ---NGK-NIVTANY--SGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHK 181 (361)
T ss_dssp ---CSS-EEEEEET--TTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred ---CCC-EEEEEEC--CCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEE
Confidence 122 3443332 3457889988643 2211110 00000 0000 0011123444 575 7766655567888
Q ss_pred EEcCCCe-------eecC----CCCCcccccCCCCcccccceeecccCCCe-EEEEEEeecCCccceEEEEEECCCCCEE
Q 018005 222 FDLENGI-------WETP----NDANDHMTMMLPHELTFFRLVNDGEESNK-LYLIGGVGRNGISTTMKLWELGCGGNWI 289 (362)
Q Consensus 222 ~D~~~~~-------w~~~----~~p~~~~~~~~p~~~~~~~lv~~~~~~G~-L~vv~~~~~~~~~~~i~vw~l~~~~~W~ 289 (362)
||+.... .... ... .+.......+... -+|+ |++... ....+.+|.++ .+..+
T Consensus 182 ~~~~~~~~~~~~~~l~~~~~~~~~~-------~~~~~~~~~~~~s--pdg~~l~v~~~-----~~~~v~v~~~~-~g~~~ 246 (361)
T 3scy_A 182 FNINPNANADNKEKFLTKGTPEAFK-------VAPGSGPRHLIFN--SDGKFAYLINE-----IGGTVIAFRYA-DGMLD 246 (361)
T ss_dssp EEECTTCCTTTCCCCEEEEEEEEEE-------CCTTCCEEEEEEC--TTSSEEEEEET-----TTCEEEEEEEE-TTEEE
T ss_pred EEEcCCCCcccccceeeccccccee-------cCCCCCCeEEEEc--CCCCEEEEEcC-----CCCeEEEEEec-CCceE
Confidence 8876543 2110 000 1111111223322 5776 555432 34679999996 45555
Q ss_pred EEecccHHHHHHhhhccccCCccEEEEe-eCCEEEEEeec-CCeEEEEECC--CCceEEcCCC
Q 018005 290 EVERVPEMMCRKFMSVCYHNYDHVYCFW-HQGMICVCCYT-WPEILYYNVA--RRTWHWLPSC 348 (362)
Q Consensus 290 ~v~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~-~~~v~~yd~~--~~~w~~~~~~ 348 (362)
.+..++... . . .....-.++. ++..+|+.... .+.+.+|+++ +++++.+...
T Consensus 247 ~~~~~~~~~-----~-~-~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~ 302 (361)
T 3scy_A 247 EIQTVAADT-----V-N-AQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQ 302 (361)
T ss_dssp EEEEEESCS-----S-C-CCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEE
T ss_pred EeEEEecCC-----C-C-CCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEe
Confidence 554432100 0 0 0001112222 44567777665 5778888885 5666655433
No 162
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=67.81 E-value=57 Score=27.81 Aligned_cols=194 Identities=13% Similarity=0.016 Sum_probs=98.0
Q ss_pred ecCCceEEEecCCCCeEEEEeCCc----Cceee-ccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCcc
Q 018005 107 SSSKGLLCFSLPSSSSFLVCNLVT----LSSRT-IDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSW 181 (362)
Q Consensus 107 ~s~~Gll~~~~~~~~~~~v~NP~t----~~w~~-lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W 181 (362)
...+|.|++.....+.+..+++.+ ..... ++.. . ..-.+++++..+ -.+++... ....+++++.....=
T Consensus 38 d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~-~-~~p~glavd~~~--~~ly~~d~--~~~~I~~~~~~g~~~ 111 (316)
T 1ijq_A 38 EVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRD-I-QAPDGLAVDWIH--SNIYWTDS--VLGTVSVADTKGVKR 111 (316)
T ss_dssp ETTTTEEEEEETTTTEEEEEEC--------CEEEECSS-C-SCCCEEEEETTT--TEEEEEET--TTTEEEEEETTSSSE
T ss_pred EeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCC-C-CCcCEEEEeecC--CeEEEEEC--CCCEEEEEeCCCCce
Confidence 345677887766567899999876 22222 2211 0 112355555322 25666443 345788888765322
Q ss_pred cccccCCCCccccccCCCcccEEE---CCEEEEEecCC-cEEEEEEcCCCeeecCCCCCcccccCCCCcccccceeeccc
Q 018005 182 SKFDIDGFPSMILSQSSHQEGVFY---KGSLYFTTPEP-FSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGE 257 (362)
Q Consensus 182 ~~~~~~~~p~~~~~~~~~~~~v~~---~G~ly~~~~~~-~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~~~lv~~~~ 257 (362)
+... . . .+ ....++.+ +|.+||..... ..|..+|++...-..+.... + ..|. .+... .
T Consensus 112 ~~~~--~--~-~~---~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~~--~--~~P~-----gla~d-~ 173 (316)
T 1ijq_A 112 KTLF--R--E-NG---SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTEN--I--QWPN-----GITLD-L 173 (316)
T ss_dssp EEEE--E--C-TT---CCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSS--C--SCEE-----EEEEE-T
T ss_pred EEEE--E--C-CC---CCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEECC--C--CCce-----EEEEe-c
Confidence 2211 0 0 01 12234444 68999997543 58999998754333221000 0 0122 23321 0
Q ss_pred CCCeEEEEEEeecCCccceEEEEEECCCCCEEEEecccHHHHHHhhhccccCCccEEEEeeCCEEEEEeecCCeEEEEEC
Q 018005 258 ESNKLYLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYTWPEILYYNV 337 (362)
Q Consensus 258 ~~G~L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~v~~yd~ 337 (362)
.+++||++.. ....|.++.++. ..-+.+...+. .+ ..+......++.+|+.....+.|..+|+
T Consensus 174 ~~~~lY~~D~-----~~~~I~~~d~dg-~~~~~~~~~~~-----~~------~~P~giav~~~~ly~~d~~~~~V~~~~~ 236 (316)
T 1ijq_A 174 LSGRLYWVDS-----KLHSISSIDVNG-GNRKTILEDEK-----RL------AHPFSLAVFEDKVFWTDIINEAIFSANR 236 (316)
T ss_dssp TTTEEEEEET-----TTTEEEEEETTS-CSCEEEEECTT-----TT------SSEEEEEEETTEEEEEETTTTEEEEEET
T ss_pred cCCEEEEEEC-----CCCeEEEEecCC-CceEEEeecCC-----cc------CCcEEEEEECCEEEEEECCCCeEEEEeC
Confidence 3688998875 346777776642 22222222110 00 0112222346788998877778999998
Q ss_pred CCCc
Q 018005 338 ARRT 341 (362)
Q Consensus 338 ~~~~ 341 (362)
.+++
T Consensus 237 ~~g~ 240 (316)
T 1ijq_A 237 LTGS 240 (316)
T ss_dssp TTCC
T ss_pred CCCc
Confidence 6653
No 163
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=67.61 E-value=56 Score=27.66 Aligned_cols=139 Identities=7% Similarity=0.104 Sum_probs=69.5
Q ss_pred CCeEEEEeCCcCcee-eccCC---CCCCccceEEEEeCCC-ceEEEEEeeecCCCeEEEEeCCCCcccccccCCCCcccc
Q 018005 120 SSSFLVCNLVTLSSR-TIDFP---TYPFDFELLTLVSTPS-GYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMIL 194 (362)
Q Consensus 120 ~~~~~v~NP~t~~w~-~lP~~---~~~~~~~~~~~~~~~~-~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~ 194 (362)
.+.+.+||..+++.. .+... ........+++.+... ...+++.++ ....+.+||..++.=... +..
T Consensus 43 ~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~--~dg~i~v~d~~~~~~~~~----~~~--- 113 (366)
T 3k26_A 43 SNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAG--SRGIIRIINPITMQCIKH----YVG--- 113 (366)
T ss_dssp TTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEE--TTCEEEEECTTTCCEEEE----EES---
T ss_pred CCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEec--CCCEEEEEEchhceEeee----ecC---
Confidence 357888998877643 22211 1122334455554322 134555554 345899999876532111 100
Q ss_pred ccCCCcccEEE---CCEEEEEecCCcEEEEEEcCCCeeecCCC--CCcccccCCCCcccccceeecccCCCeEEEEEEee
Q 018005 195 SQSSHQEGVFY---KGSLYFTTPEPFSIVRFDLENGIWETPND--ANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVG 269 (362)
Q Consensus 195 ~~~~~~~~v~~---~G~ly~~~~~~~~i~~~D~~~~~w~~~~~--p~~~~~~~~p~~~~~~~lv~~~~~~G~L~vv~~~~ 269 (362)
....-..+.+ +|.+.+.+.....|..||+.+.+-..... .. ..... ..+... -+|++++.++
T Consensus 114 -~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~------~~~~v--~~~~~~--~~~~~l~~~~-- 180 (366)
T 3k26_A 114 -HGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEG------HRDEV--LSADYD--LLGEKIMSCG-- 180 (366)
T ss_dssp -CCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTS------CSSCE--EEEEEC--TTSSEEEEEE--
T ss_pred -CCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEeccccc------ccCce--eEEEEC--CCCCEEEEec--
Confidence 0011122333 45666666655679999998765433210 00 11111 122211 4677766665
Q ss_pred cCCccceEEEEEEC
Q 018005 270 RNGISTTMKLWELG 283 (362)
Q Consensus 270 ~~~~~~~i~vw~l~ 283 (362)
....+.+|++.
T Consensus 181 ---~dg~i~i~d~~ 191 (366)
T 3k26_A 181 ---MDHSLKLWRIN 191 (366)
T ss_dssp ---TTSCEEEEESC
T ss_pred ---CCCCEEEEECC
Confidence 23688999875
No 164
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=67.41 E-value=37 Score=32.83 Aligned_cols=123 Identities=12% Similarity=0.155 Sum_probs=62.0
Q ss_pred cccEEECCEEEEEecCCcEEEEEEcCC--CeeecCCCCCcccccC-CCCcccccceeecccCCCeEEEEEEeecCCccce
Q 018005 200 QEGVFYKGSLYFTTPEPFSIVRFDLEN--GIWETPNDANDHMTMM-LPHELTFFRLVNDGEESNKLYLIGGVGRNGISTT 276 (362)
Q Consensus 200 ~~~v~~~G~ly~~~~~~~~i~~~D~~~--~~w~~~~~p~~~~~~~-~p~~~~~~~lv~~~~~~G~L~vv~~~~~~~~~~~ 276 (362)
..+++.+|.+|+.+... .+.++|.++ ..|+.- ......... .........+.. .+|+||+... ...
T Consensus 60 ~~P~v~~g~vyv~~~~~-~v~AlD~~tG~~~W~~~-~~~~~~~~~~~~~~~~~~~~~~---~~~~v~v~~~------dg~ 128 (668)
T 1kv9_A 60 ATPLFHDGVIYTSMSWS-RVIAVDAASGKELWRYD-PEVAKVKARTSCCDAVNRGVAL---WGDKVYVGTL------DGR 128 (668)
T ss_dssp CCCEEETTEEEEEEGGG-EEEEEETTTCCEEEEEC-CCCCGGGGGGCTTCSCCCCCEE---EBTEEEEECT------TSE
T ss_pred cCCEEECCEEEEECCCC-eEEEEECCCChhceEEC-CCCCccccccccccCCccceEE---ECCEEEEEcC------CCE
Confidence 45788899999876654 799999875 478752 120000000 000001122332 5677776532 134
Q ss_pred EEEEEECCCCC--EEEEecccHHHHHHhhhccccCCccEEEEeeCCEEEEEeec-----CCeEEEEECCCCc--eEE
Q 018005 277 MKLWELGCGGN--WIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYT-----WPEILYYNVARRT--WHW 344 (362)
Q Consensus 277 i~vw~l~~~~~--W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-----~~~v~~yd~~~~~--w~~ 344 (362)
+..++.+ +++ |+.-..-+. .... ..... +..++.||+.... .+.+.+||.++++ |+.
T Consensus 129 l~alD~~-tG~~~W~~~~~~~~----~~~~---~~~~P---~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 194 (668)
T 1kv9_A 129 LIALDAK-TGKAIWSQQTTDPA----KPYS---ITGAP---RVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRF 194 (668)
T ss_dssp EEEEETT-TCCEEEEEECSCTT----SSCB---CCSCC---EEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred EEEEECC-CCCEeeeeccCCCC----Ccce---ecCCC---EEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEe
Confidence 4444332 343 885432110 0000 00111 2346778876432 3579999999984 655
No 165
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=67.27 E-value=57 Score=27.61 Aligned_cols=57 Identities=9% Similarity=-0.176 Sum_probs=30.4
Q ss_pred CCCeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCcc
Q 018005 119 SSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSW 181 (362)
Q Consensus 119 ~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W 181 (362)
.++.+.+||..+++....-.. .......+.+.+.+ +.++.++ ....+.+||..++.-
T Consensus 52 ~dg~i~vwd~~~~~~~~~~~~-h~~~v~~~~~~~~~---~~l~s~~--~dg~i~iwd~~~~~~ 108 (369)
T 3zwl_B 52 KDSSASVWYSLNGERLGTLDG-HTGTIWSIDVDCFT---KYCVTGS--ADYSIKLWDVSNGQC 108 (369)
T ss_dssp SSSCEEEEETTTCCEEEEECC-CSSCEEEEEECTTS---SEEEEEE--TTTEEEEEETTTCCE
T ss_pred CCCEEEEEeCCCchhhhhhhh-cCCcEEEEEEcCCC---CEEEEEe--CCCeEEEEECCCCcE
Confidence 356789999888775432211 11122334443322 2233333 345899999877653
No 166
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=67.04 E-value=96 Score=30.11 Aligned_cols=147 Identities=10% Similarity=0.001 Sum_probs=70.7
Q ss_pred cCCc-eEEEecCCCCeEEEEeCCcCc-eeeccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCcccccc
Q 018005 108 SSKG-LLCFSLPSSSSFLVCNLVTLS-SRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFD 185 (362)
Q Consensus 108 s~~G-ll~~~~~~~~~~~v~NP~t~~-w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~ 185 (362)
+.+| .+.. +..++.+.+||..++. ....-. ........+.+.+ .+...++.++ ....+.+||..++.-...-
T Consensus 106 s~~~~~l~~-~~~dg~i~vw~~~~~~~~~~~~~-~~~~~v~~~~~~p--~~~~~l~~~~--~dg~v~vwd~~~~~~~~~~ 179 (814)
T 3mkq_A 106 HPTKPYVLS-GSDDLTVKLWNWENNWALEQTFE-GHEHFVMCVAFNP--KDPSTFASGC--LDRTVKVWSLGQSTPNFTL 179 (814)
T ss_dssp CSSSSEEEE-EETTSEEEEEEGGGTSEEEEEEE-CCSSCEEEEEEET--TEEEEEEEEE--TTSEEEEEETTCSSCSEEE
T ss_pred eCCCCEEEE-EcCCCEEEEEECCCCceEEEEEc-CCCCcEEEEEEEc--CCCCEEEEEe--CCCeEEEEECCCCcceeEE
Confidence 3445 3333 3345789999998863 222111 1111222334432 1223444444 3458899998654322111
Q ss_pred cCCCCccccccCCCcccEEE----CCEEEEEecCCcEEEEEEcCCCeeecCCCCCcccccCCCCcccccceeecccCCCe
Q 018005 186 IDGFPSMILSQSSHQEGVFY----KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNK 261 (362)
Q Consensus 186 ~~~~p~~~~~~~~~~~~v~~----~G~ly~~~~~~~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~ 261 (362)
.. ........+.. +|...+.++....+..||..+.+-...... ...... .+... -+|.
T Consensus 180 ----~~---~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~-------~~~~v~--~~~~~--~~~~ 241 (814)
T 3mkq_A 180 ----TT---GQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEG-------HMSNVS--FAVFH--PTLP 241 (814)
T ss_dssp ----EC---CCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEEC-------CSSCEE--EEEEC--SSSS
T ss_pred ----ec---CCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcC-------CCCCEE--EEEEc--CCCC
Confidence 00 00011222333 566666666666899999987653221101 111111 22211 4677
Q ss_pred EEEEEEeecCCccceEEEEEEC
Q 018005 262 LYLIGGVGRNGISTTMKLWELG 283 (362)
Q Consensus 262 L~vv~~~~~~~~~~~i~vw~l~ 283 (362)
++++++ ....+.+|.+.
T Consensus 242 ~l~~~~-----~dg~v~vwd~~ 258 (814)
T 3mkq_A 242 IIISGS-----EDGTLKIWNSS 258 (814)
T ss_dssp EEEEEE-----TTSCEEEEETT
T ss_pred EEEEEe-----CCCeEEEEECC
Confidence 666665 23678999774
No 167
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=66.53 E-value=71 Score=28.46 Aligned_cols=122 Identities=10% Similarity=-0.007 Sum_probs=65.0
Q ss_pred CCEEEEEecCCcEEEEEEcCCCeeecCCCCC------cccccCCCCcccccceeecccCCCeEEEEEEeecC--CccceE
Q 018005 206 KGSLYFTTPEPFSIVRFDLENGIWETPNDAN------DHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRN--GISTTM 277 (362)
Q Consensus 206 ~G~ly~~~~~~~~i~~~D~~~~~w~~~~~p~------~~~~~~~p~~~~~~~lv~~~~~~G~L~vv~~~~~~--~~~~~i 277 (362)
+|+++|+...+ .+.++|..++.-..+. +- ....++.|.+.....+- . -+++||+....... .....-
T Consensus 237 dG~~~~vs~~g-~V~v~d~~~~~~~v~~-~~~~~~~~~~~~g~~p~g~q~~a~~-~--~~~~lyV~~~~~~~~~hk~~~~ 311 (386)
T 3sjl_D 237 AGRLVWPTYTG-KIHQIDLSSGDAKFLP-AVEALTEAERADGWRPGGWQQVAYH-R--ALDRIYLLVDQRDEWRHKTASR 311 (386)
T ss_dssp TTEEEEEBTTS-EEEEEECTTSSCEECC-CEESSCHHHHHTTEEECSSSCEEEE-T--TTTEEEEEEEECCTTCTTSCEE
T ss_pred CCcEEEEeCCC-EEEEEECCCCcceeec-ceeccccccccccccCCCcceeeEC-C--CCCeEEEEeccccccccCCCCC
Confidence 78888877654 7899999765422211 10 00001123322222222 2 46889998653211 112245
Q ss_pred EEEEECCCCCEEEEecccHHHHHHhhhccccCCccEEEEe-eCC-EEEEEeecCCeEEEEECCCCceEE
Q 018005 278 KLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCFW-HQG-MICVCCYTWPEILYYNVARRTWHW 344 (362)
Q Consensus 278 ~vw~l~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~-~i~~~~~~~~~v~~yd~~~~~w~~ 344 (362)
+||.+| ..+++.+.+++.. ....-..+. ++. ++|+.....+.|.+||..+++-.+
T Consensus 312 ~V~viD-~~t~kv~~~i~vg-----------~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~ 368 (386)
T 3sjl_D 312 FVVVLD-AKTGERLAKFEMG-----------HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELR 368 (386)
T ss_dssp EEEEEE-TTTCCEEEEEEEE-----------EEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEE
T ss_pred EEEEEE-CCCCeEEEEEECC-----------CCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEE
Confidence 788886 3445666665421 001112232 333 678877677899999999987654
No 168
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=66.48 E-value=61 Score=27.64 Aligned_cols=154 Identities=7% Similarity=-0.088 Sum_probs=74.8
Q ss_pred EEEecCCceEEEecCCCCeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCcccc
Q 018005 104 TLLSSSKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSK 183 (362)
Q Consensus 104 ~~~~s~~Gll~~~~~~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~ 183 (362)
.+.++.+|.+.+... .+.+.++|..+++...--..........+.+.+.... +.++.++ ....+.+||..++.-..
T Consensus 88 ~~s~s~D~~i~~w~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~s~s--~dg~i~~wd~~~~~~~~ 163 (343)
T 3lrv_A 88 IISRGPCNRLLLLYP-GNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNT-EYFIWAD--NRGTIGFQSYEDDSQYI 163 (343)
T ss_dssp EEEECSTTEEEEEET-TTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---C-CEEEEEE--TTCCEEEEESSSSCEEE
T ss_pred eEEecCCCeEEEEEc-cCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCC-CEEEEEe--CCCcEEEEECCCCcEEE
Confidence 445566665554432 3567778888877332211111111222333220011 2333333 34578999988765422
Q ss_pred cccCCCCccccccCCCcccEEE--CCEEEEEecCCcEEEEEEcCCCeee--cCCCCCcccccCCCCcccccceeecccCC
Q 018005 184 FDIDGFPSMILSQSSHQEGVFY--KGSLYFTTPEPFSIVRFDLENGIWE--TPNDANDHMTMMLPHELTFFRLVNDGEES 259 (362)
Q Consensus 184 ~~~~~~p~~~~~~~~~~~~v~~--~G~ly~~~~~~~~i~~~D~~~~~w~--~~~~p~~~~~~~~p~~~~~~~lv~~~~~~ 259 (362)
.. .... ......+.+ +|.+.+.+.....|..||+.+.+-. .+... ..... ..+... -+
T Consensus 164 ~~--~~~~-----~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~-------h~~~v--~~l~fs--~~ 225 (343)
T 3lrv_A 164 VH--SAKS-----DVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVD-------EEAKI--KEVKFA--DN 225 (343)
T ss_dssp EE--CCCS-----SCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCC-------TTSCE--EEEEEC--TT
T ss_pred EE--ecCC-----CCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEecc-------CCCCE--EEEEEe--CC
Confidence 11 0010 011223333 5777777666668999999876432 22110 11111 122211 46
Q ss_pred CeEEEEEEeecCCccceEEEEEECCC
Q 018005 260 NKLYLIGGVGRNGISTTMKLWELGCG 285 (362)
Q Consensus 260 G~L~vv~~~~~~~~~~~i~vw~l~~~ 285 (362)
|.+++.+. . ..+.+|++...
T Consensus 226 g~~l~s~~-~-----~~v~iwd~~~~ 245 (343)
T 3lrv_A 226 GYWMVVEC-D-----QTVVCFDLRKD 245 (343)
T ss_dssp SSEEEEEE-S-----SBEEEEETTSS
T ss_pred CCEEEEEe-C-----CeEEEEEcCCC
Confidence 77666665 1 38999988643
No 169
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=65.91 E-value=42 Score=28.68 Aligned_cols=26 Identities=12% Similarity=0.156 Sum_probs=20.8
Q ss_pred CEEEEEecCCcEEEEEEcCCCeeecC
Q 018005 207 GSLYFTTPEPFSIVRFDLENGIWETP 232 (362)
Q Consensus 207 G~ly~~~~~~~~i~~~D~~~~~w~~~ 232 (362)
|.+||++.....|..||+++++...+
T Consensus 61 ~~l~~~d~~~~~i~~~d~~~~~~~~~ 86 (326)
T 2ghs_A 61 GTAWWFNILERELHELHLASGRKTVH 86 (326)
T ss_dssp TEEEEEEGGGTEEEEEETTTTEEEEE
T ss_pred CEEEEEECCCCEEEEEECCCCcEEEE
Confidence 78999987666899999998776543
No 170
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=65.74 E-value=61 Score=27.40 Aligned_cols=68 Identities=13% Similarity=0.196 Sum_probs=36.9
Q ss_pred cCCceEEEecCCCCeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCc
Q 018005 108 SSKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQS 180 (362)
Q Consensus 108 s~~Gll~~~~~~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~ 180 (362)
+.+|-.++.+..++.+.+||..+++...+..- ......+.+..... .+.++.++ ....+.+||..++.
T Consensus 95 ~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~--~~~v~~~~~~~~~~-~~~l~~~~--~dg~i~vwd~~~~~ 162 (368)
T 3mmy_A 95 SDDGSKVFTASCDKTAKMWDLSSNQAIQIAQH--DAPVKTIHWIKAPN-YSCVMTGS--WDKTLKFWDTRSSN 162 (368)
T ss_dssp CTTSSEEEEEETTSEEEEEETTTTEEEEEEEC--SSCEEEEEEEECSS-CEEEEEEE--TTSEEEEECSSCSS
T ss_pred CcCCCEEEEEcCCCcEEEEEcCCCCceeeccc--cCceEEEEEEeCCC-CCEEEEcc--CCCcEEEEECCCCc
Confidence 33553233333467899999999987664321 22223344422222 24444443 34579999987653
No 171
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=65.52 E-value=97 Score=29.63 Aligned_cols=179 Identities=13% Similarity=-0.019 Sum_probs=89.2
Q ss_pred CeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCcccccccCCCCccccccCCCc
Q 018005 121 SSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILSQSSHQ 200 (362)
Q Consensus 121 ~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~~ 200 (362)
..+...+..+.....+-+...-....++.++.. .-+|++... ....+..++......+... .. .....
T Consensus 15 ~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~--~~~lywtD~--~~~~I~r~~~~g~~~~~v~--~~------g~~~P 82 (628)
T 4a0p_A 15 ADIRRISLETNNNNVAIPLTGVKEASALDFDVT--DNRIYWTDI--SLKTISRAFMNGSALEHVV--EF------GLDYP 82 (628)
T ss_dssp TEEEEEESSCTTCEEECCCCSCSCEEEEEEETT--TTEEEEEET--TTTEEEEEETTSCSCEEEE--CS------SCSCC
T ss_pred CcEEEEECCCCCcceEEEcCCCCceEEEEEECC--CCEEEEEEC--CCCeEEEEECCCCCcEEEE--eC------CCCCc
Confidence 345555665544332222211122334555532 236776543 3457777877655444332 10 11234
Q ss_pred ccEEE---CCEEEEEecCCcEEEEEEcCCCeeecCCCCCcccccCCCCcccccceeecccCCCeEEEEEEeecCCccceE
Q 018005 201 EGVFY---KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGISTTM 277 (362)
Q Consensus 201 ~~v~~---~G~ly~~~~~~~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~L~vv~~~~~~~~~~~i 277 (362)
.++++ +|.+||.......|.++|++...-..+.... +.. -..+++. -.+|.||+... +....|
T Consensus 83 ~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~------l~~---P~~iavd-p~~G~lY~tD~----g~~~~I 148 (628)
T 4a0p_A 83 EGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKD------LDS---PRALALD-PAEGFMYWTEW----GGKPKI 148 (628)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSS------CCC---EEEEEEE-TTTTEEEEEEC----SSSCEE
T ss_pred ceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCC------CCC---cccEEEc-cCCCeEEEeCC----CCCCEE
Confidence 45666 5899999887778999999754322211010 111 1234421 14789998864 112444
Q ss_pred EEEEECCCCC-EEE-EecccHHHHHHhhhccccCCccEEEE-eeCCEEEEEeecCCeEEEEECCCCc
Q 018005 278 KLWELGCGGN-WIE-VERVPEMMCRKFMSVCYHNYDHVYCF-WHQGMICVCCYTWPEILYYNVARRT 341 (362)
Q Consensus 278 ~vw~l~~~~~-W~~-v~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~v~~yd~~~~~ 341 (362)
+...+ +++ -+. +..+ ....-.++ ..++.||+.....+.|.++|++...
T Consensus 149 ~r~~~--dG~~~~~l~~~~--------------~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~ 199 (628)
T 4a0p_A 149 DRAAM--DGSERTTLVPNV--------------GRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLN 199 (628)
T ss_dssp EEEET--TSCSCEEEECSC--------------SSEEEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred EEEeC--CCCceEEEECCC--------------CCcceEEEccccCEEEEEECCCCEEEEEcCCCCc
Confidence 44444 333 222 2211 01111112 2357888887767788888887643
No 172
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=65.15 E-value=63 Score=27.31 Aligned_cols=189 Identities=9% Similarity=-0.084 Sum_probs=89.5
Q ss_pred CCeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCcccccccCCCCccccc---c
Q 018005 120 SSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILS---Q 196 (362)
Q Consensus 120 ~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~---~ 196 (362)
.+.+.++|+.+++....-+... ....+++.+.+. .+++... ....+.+||..+++-...- .......+ .
T Consensus 68 ~~~v~~~d~~~~~~~~~~~~~~--~~~~~~~s~dg~--~l~v~~~--~~~~v~~~d~~~~~~~~~~--~~~~~~~~~~~~ 139 (353)
T 3vgz_A 68 GGVVYRLDPVTLEVTQAIHNDL--KPFGATINNTTQ--TLWFGNT--VNSAVTAIDAKTGEVKGRL--VLDDRKRTEEVR 139 (353)
T ss_dssp SEEEEEECTTTCCEEEEEEESS--CCCSEEEETTTT--EEEEEET--TTTEEEEEETTTCCEEEEE--ESCCCCCCSSCC
T ss_pred CccEEEEcCCCCeEEEEEecCC--CcceEEECCCCC--EEEEEec--CCCEEEEEeCCCCeeEEEE--ecCCCccccccC
Confidence 4579999999988543221111 122344554332 3444332 3358899999876532111 11100000 0
Q ss_pred CCCcccEEE--CC-EEEEEec-CCcEEEEEEcCCCeeecCCCCCcccccCCCCcccccceeecccCCCeEEEEEEeecCC
Q 018005 197 SSHQEGVFY--KG-SLYFTTP-EPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNG 272 (362)
Q Consensus 197 ~~~~~~v~~--~G-~ly~~~~-~~~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~L~vv~~~~~~~ 272 (362)
......+.+ +| .+|+... ....+..+|+.+.+-.... +. .........+. -+|+..++..
T Consensus 140 ~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~-~~------~~~~~~~~~~s----~dg~~l~~~~----- 203 (353)
T 3vgz_A 140 PLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAI-QN------TGKMSTGLALD----SEGKRLYTTN----- 203 (353)
T ss_dssp CCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEE-CC------CCTTCCCCEEE----TTTTEEEEEC-----
T ss_pred CCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEe-cC------CCCccceEEEC----CCCCEEEEEc-----
Confidence 001123334 45 4666652 3457999999876543321 10 00111122222 4565444433
Q ss_pred ccceEEEEEECCCCC-EEEEecccHHHHHHhhhccccCCccE--EEE-eeCCEEEEEeecCCeEEEEECCCCceEE
Q 018005 273 ISTTMKLWELGCGGN-WIEVERVPEMMCRKFMSVCYHNYDHV--YCF-WHQGMICVCCYTWPEILYYNVARRTWHW 344 (362)
Q Consensus 273 ~~~~i~vw~l~~~~~-W~~v~~~p~~~~~~~~~~~~~~~~~~--~~~-~~~~~i~~~~~~~~~v~~yd~~~~~w~~ 344 (362)
....+.+|.+..... +. +. .+. . ...... .++ -.++.+|+.....+.+.+||+++++...
T Consensus 204 ~~~~i~~~d~~~~~~~~~-~~-~~~------~----~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~ 267 (353)
T 3vgz_A 204 ADGELITIDTADNKILSR-KK-LLD------D----GKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILA 267 (353)
T ss_dssp TTSEEEEEETTTTEEEEE-EE-CCC------S----SSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEE
T ss_pred CCCeEEEEECCCCeEEEE-EE-cCC------C----CCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEE
Confidence 135667776532221 22 11 100 0 000111 122 2456788877666789999999886654
No 173
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=65.10 E-value=58 Score=29.43 Aligned_cols=117 Identities=11% Similarity=0.112 Sum_probs=62.9
Q ss_pred CcccEEEC-----CEEEEEecCCcEEEEEEcCCCeeecCCCCCcccccCCCCcccccceeecccCCCeEEEEEEeecCCc
Q 018005 199 HQEGVFYK-----GSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGI 273 (362)
Q Consensus 199 ~~~~v~~~-----G~ly~~~~~~~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~L~vv~~~~~~~~ 273 (362)
...++.++ |.||+.... ..|..+|+++.....+... +. .-..+... .+|.||+..... .
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~-~~I~~id~~~g~v~~~~~~-------~~---~P~giavd--~dG~lyVad~~~---~ 203 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQR-DAFRHVDFVNQYVDIKTTN-------IG---QCADVNFT--LNGDMVVVDDQS---S 203 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBT-SCEEEEETTTTEEEEECCC-------CS---CEEEEEEC--TTCCEEEEECCS---C
T ss_pred CCceEEEccccCCCEEEEEeCC-CCEEEEECCCCEEEEeecC-------CC---CccEEEEC--CCCCEEEEcCCC---C
Confidence 34567776 899998765 6799999988877664312 11 11123323 677888886521 1
Q ss_pred cceEEEEEECCCCCEEEEecccHHHHHHhhhccccCCccEEEEee-CCEEEEEeecCCeEEEEECCCCce
Q 018005 274 STTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCFWH-QGMICVCCYTWPEILYYNVARRTW 342 (362)
Q Consensus 274 ~~~i~vw~l~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~v~~yd~~~~~w 342 (362)
...-.+..++..+.+.....++ .+ ....-.++.. ++.||+.....+.|..||+++++.
T Consensus 204 ~~~~gv~~~~~~~~~~~~~~~~-----~~------~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~ 262 (433)
T 4hw6_A 204 DTNTGIYLFTRASGFTERLSLC-----NA------RGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTL 262 (433)
T ss_dssp TTSEEEEEECGGGTTCCEEEEE-----EC------SSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCE
T ss_pred cccceEEEEECCCCeecccccc-----cc------CCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeE
Confidence 1122344444333332111111 00 0011122332 567888776666789999887665
No 174
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=64.46 E-value=62 Score=27.04 Aligned_cols=148 Identities=11% Similarity=0.035 Sum_probs=68.0
Q ss_pred cCCceEEEecCCCCeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCcccccccC
Q 018005 108 SSKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDID 187 (362)
Q Consensus 108 s~~Gll~~~~~~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~~~ 187 (362)
+-+|-.++.+..++.+.+||..++.-..-..........++++.+... ..++.++ ....+.+||..+..=...-
T Consensus 106 ~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~--~~l~sgs--~D~~v~iwd~~~~~~~~~~-- 179 (304)
T 2ynn_A 106 HPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDP--STFASGC--LDRTVKVWSLGQSTPNFTL-- 179 (304)
T ss_dssp CSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCT--TEEEEEE--TTSEEEEEETTCSSCSEEE--
T ss_pred cCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCC--CEEEEEe--CCCeEEEEECCCCCcccee--
Confidence 334433334444678999998876422111111112223344433211 2333333 3468899998653211000
Q ss_pred CCCccccccCCCcccEEE----CCEEEEEecCCcEEEEEEcCCCeeec-CCCCCcccccCCCCcccccceeecccCCCeE
Q 018005 188 GFPSMILSQSSHQEGVFY----KGSLYFTTPEPFSIVRFDLENGIWET-PNDANDHMTMMLPHELTFFRLVNDGEESNKL 262 (362)
Q Consensus 188 ~~p~~~~~~~~~~~~v~~----~G~ly~~~~~~~~i~~~D~~~~~w~~-~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~L 262 (362)
.. ........+.+ +|.+.+.++...+|..+|+.+.+-.. +.. ..... ..+... -++.+
T Consensus 180 --~~---~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~--------h~~~v--~~~~~~--p~~~~ 242 (304)
T 2ynn_A 180 --TT---GQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEG--------HMSNV--SFAVFH--PTLPI 242 (304)
T ss_dssp --EC---CCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEEC--------CSSCE--EEEEEC--SSSSE
T ss_pred --cc---CCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCC--------CCCCE--EEEEEC--CCCCE
Confidence 00 00001111211 34455555555689999998764322 111 11111 112211 46666
Q ss_pred EEEEEeecCCccceEEEEEEC
Q 018005 263 YLIGGVGRNGISTTMKLWELG 283 (362)
Q Consensus 263 ~vv~~~~~~~~~~~i~vw~l~ 283 (362)
++.+. ...++.+|++.
T Consensus 243 l~s~s-----~Dg~i~iWd~~ 258 (304)
T 2ynn_A 243 IISGS-----EDGTLKIWNSS 258 (304)
T ss_dssp EEEEE-----TTSCEEEEETT
T ss_pred EEEEc-----CCCeEEEEECC
Confidence 66655 23789999774
No 175
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=64.45 E-value=96 Score=29.19 Aligned_cols=150 Identities=11% Similarity=0.038 Sum_probs=71.2
Q ss_pred cCCceEEEecCCCCeEEEEeCCcCceeecc-CC-----CCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCcc
Q 018005 108 SSKGLLCFSLPSSSSFLVCNLVTLSSRTID-FP-----TYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSW 181 (362)
Q Consensus 108 s~~Gll~~~~~~~~~~~v~NP~t~~w~~lP-~~-----~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W 181 (362)
+-+|-+++.+..++.+.+||..+++....- .. ........+++.+.+ +.++.++ ....+.+||..++..
T Consensus 199 spdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg---~~l~s~s--~D~~v~lWd~~~~~~ 273 (611)
T 1nr0_A 199 NPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDG---TKIASAS--ADKTIKIWNVATLKV 273 (611)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTS---SEEEEEE--TTSEEEEEETTTTEE
T ss_pred CCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCC---CEEEEEe--CCCeEEEEeCCCCce
Confidence 344533334434678999999888754322 11 111122234444332 2333333 346899999987765
Q ss_pred cccccCCCCccccccCCCcccEEECCEEEEEecCCcEEEEEEcCCCeeecCCCCCcccccCCCCcccccceeecccCCCe
Q 018005 182 SKFDIDGFPSMILSQSSHQEGVFYKGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNK 261 (362)
Q Consensus 182 ~~~~~~~~p~~~~~~~~~~~~v~~~G~ly~~~~~~~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~ 261 (362)
...- .... .. ......+..+|.....+.....+..+|+.+.+....... ..... ..+... -+|+
T Consensus 274 ~~~~--~~~~-~~--~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~g-------h~~~v--~~l~~s--pdg~ 337 (611)
T 1nr0_A 274 EKTI--PVGT-RI--EDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYG-------HNKAI--TALSSS--ADGK 337 (611)
T ss_dssp EEEE--ECCS-SG--GGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECC-------CSSCE--EEEEEC--TTSS
T ss_pred eeee--cCCC-Cc--cceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcC-------CCCCE--EEEEEe--CCCC
Confidence 3221 1110 00 011122333554444444444678888876643221101 11111 122211 4677
Q ss_pred EEEEEEeecCCccceEEEEEEC
Q 018005 262 LYLIGGVGRNGISTTMKLWELG 283 (362)
Q Consensus 262 L~vv~~~~~~~~~~~i~vw~l~ 283 (362)
..+.+. ...++.+|++.
T Consensus 338 ~l~s~s-----~D~~v~~Wd~~ 354 (611)
T 1nr0_A 338 TLFSAD-----AEGHINSWDIS 354 (611)
T ss_dssp EEEEEE-----TTSCEEEEETT
T ss_pred EEEEEe-----CCCcEEEEECC
Confidence 666655 23678888764
No 176
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=64.40 E-value=68 Score=27.46 Aligned_cols=118 Identities=10% Similarity=0.086 Sum_probs=65.2
Q ss_pred CCE-EEEEecCCcEEEEEEcCCCeeecCC-CCCcccccCCCCccc-ccceeecccCCCeEEEEEEeecCCc-cceEEEEE
Q 018005 206 KGS-LYFTTPEPFSIVRFDLENGIWETPN-DANDHMTMMLPHELT-FFRLVNDGEESNKLYLIGGVGRNGI-STTMKLWE 281 (362)
Q Consensus 206 ~G~-ly~~~~~~~~i~~~D~~~~~w~~~~-~p~~~~~~~~p~~~~-~~~lv~~~~~~G~L~vv~~~~~~~~-~~~i~vw~ 281 (362)
+|+ +|+.......+.+||+.+.++..+. .+. .+.... ...+... -+|+..++.. .. ...+.+|.
T Consensus 221 dg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~------~~~~~~~~~~i~~s--pdg~~l~v~~----~~~~~~i~v~~ 288 (361)
T 3scy_A 221 DGKFAYLINEIGGTVIAFRYADGMLDEIQTVAA------DTVNAQGSGDIHLS--PDGKYLYASN----RLKADGVAIFK 288 (361)
T ss_dssp TSSEEEEEETTTCEEEEEEEETTEEEEEEEEES------CSSCCCCEEEEEEC--TTSSEEEEEE----CSSSCEEEEEE
T ss_pred CCCEEEEEcCCCCeEEEEEecCCceEEeEEEec------CCCCCCCcccEEEC--CCCCEEEEEC----CCCCCEEEEEE
Confidence 565 6666655568999999877664432 010 222111 1223212 5787444433 12 47899999
Q ss_pred ECC-CCCEEEEecccHHHHHHhhhccccCCccEEEEe-eCCEEEEEeecCCeEEE--EECCCCceEEcC
Q 018005 282 LGC-GGNWIEVERVPEMMCRKFMSVCYHNYDHVYCFW-HQGMICVCCYTWPEILY--YNVARRTWHWLP 346 (362)
Q Consensus 282 l~~-~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~v~~--yd~~~~~w~~~~ 346 (362)
++. .+.++.+..++. . ....-.++. ++..|++.....+.+.+ +|+++++.+.+.
T Consensus 289 ~~~~~g~~~~~~~~~~-------g----~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~ 346 (361)
T 3scy_A 289 VDETNGTLTKVGYQLT-------G----IHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIK 346 (361)
T ss_dssp ECTTTCCEEEEEEEEC-------S----SCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECS
T ss_pred EcCCCCcEEEeeEecC-------C----CCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecc
Confidence 974 355777766542 0 111112333 34567777655566666 677788888774
No 177
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=64.29 E-value=62 Score=31.20 Aligned_cols=111 Identities=14% Similarity=0.127 Sum_probs=63.3
Q ss_pred CCceEEEecCCCCeEEEEeCCcCc--eeeccCCCCCC--------ccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCC
Q 018005 109 SKGLLCFSLPSSSSFLVCNLVTLS--SRTIDFPTYPF--------DFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTD 178 (362)
Q Consensus 109 ~~Gll~~~~~~~~~~~v~NP~t~~--w~~lP~~~~~~--------~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~ 178 (362)
.+|.|++... .+.++.+|+.|++ |..-+..+... .....++... +|++.. ....+..+|.+|
T Consensus 65 ~~g~vyv~~~-~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~v~v~~---~dg~l~alD~~t 136 (668)
T 1kv9_A 65 HDGVIYTSMS-WSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGD----KVYVGT---LDGRLIALDAKT 136 (668)
T ss_dssp ETTEEEEEEG-GGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBT----EEEEEC---TTSEEEEEETTT
T ss_pred ECCEEEEECC-CCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECC----EEEEEc---CCCEEEEEECCC
Confidence 4677776543 4678899999988 65433221110 0011223222 455432 235788899876
Q ss_pred C--cccccccCCCCccccccCCCcccEEECCEEEEEecC-----CcEEEEEEcCCC--eeec
Q 018005 179 Q--SWSKFDIDGFPSMILSQSSHQEGVFYKGSLYFTTPE-----PFSIVRFDLENG--IWET 231 (362)
Q Consensus 179 ~--~W~~~~~~~~p~~~~~~~~~~~~v~~~G~ly~~~~~-----~~~i~~~D~~~~--~w~~ 231 (362)
+ .|+... .-+. ........++..+|.+|+-... ...+.+||.++. .|+.
T Consensus 137 G~~~W~~~~--~~~~--~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 194 (668)
T 1kv9_A 137 GKAIWSQQT--TDPA--KPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRF 194 (668)
T ss_dssp CCEEEEEEC--SCTT--SSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred CCEeeeecc--CCCC--CcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEe
Confidence 6 487654 2111 1111334567889999976542 247999999864 6765
No 178
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=64.27 E-value=53 Score=31.03 Aligned_cols=109 Identities=8% Similarity=-0.076 Sum_probs=60.8
Q ss_pred CCEEEEEecCCcEEEEEEcCCCeee-cCCCCCcccccCCCCcccccceeecccCCCeEEEEEEeecCCccceEEEEEECC
Q 018005 206 KGSLYFTTPEPFSIVRFDLENGIWE-TPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGISTTMKLWELGC 284 (362)
Q Consensus 206 ~G~ly~~~~~~~~i~~~D~~~~~w~-~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~L~vv~~~~~~~~~~~i~vw~l~~ 284 (362)
++.+|+.......+.++|..+.+-. .+. ... .-+.+... -+|+...++. ....+.+|++..
T Consensus 166 ~~~~~V~~~~~~~V~viD~~t~~v~~~i~---------~g~--~p~~v~~S--pDGr~lyv~~-----~dg~V~viD~~~ 227 (567)
T 1qks_A 166 ENLFSVTLRDAGQIALIDGSTYEIKTVLD---------TGY--AVHISRLS--ASGRYLFVIG-----RDGKVNMIDLWM 227 (567)
T ss_dssp GGEEEEEETTTTEEEEEETTTCCEEEEEE---------CSS--CEEEEEEC--TTSCEEEEEE-----TTSEEEEEETTS
T ss_pred CceEEEEeCCCCeEEEEECCCCeEEEEEe---------CCC--CccceEEC--CCCCEEEEEc-----CCCeEEEEECCC
Confidence 4677877776678999999986443 222 111 11123322 5676444433 125677776631
Q ss_pred CCCEEEEecccHHHHHHhhhccccCCccEEEEe-----eCCEEEEEeecCCeEEEEECCCCceEE
Q 018005 285 GGNWIEVERVPEMMCRKFMSVCYHNYDHVYCFW-----HQGMICVCCYTWPEILYYNVARRTWHW 344 (362)
Q Consensus 285 ~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~-----~~~~i~~~~~~~~~v~~yd~~~~~w~~ 344 (362)
.+-+.+.+++. +....-..+. ++..+|+..+..+.+.++|..+.+-.+
T Consensus 228 -~t~~~v~~i~~-----------G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~ 280 (567)
T 1qks_A 228 -KEPTTVAEIKI-----------GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKK 280 (567)
T ss_dssp -SSCCEEEEEEC-----------CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEE
T ss_pred -CCCcEeEEEec-----------CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEE
Confidence 12233444421 1111122334 456899988888899999988865544
No 179
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=63.49 E-value=77 Score=27.74 Aligned_cols=107 Identities=14% Similarity=0.089 Sum_probs=54.4
Q ss_pred CCEEEEEecCCcEEEEEEcCCCeeecCCCCCcccccCCCCcccccceeecccCCCeEEEEEEeecCCccceEEEEEECCC
Q 018005 206 KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGISTTMKLWELGCG 285 (362)
Q Consensus 206 ~G~ly~~~~~~~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~L~vv~~~~~~~~~~~i~vw~l~~~ 285 (362)
+|...+.+.....|..+|+.+.+-...... ...... .+... -+|+.++.+. ...++.+|++. .
T Consensus 134 dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~-------h~~~v~--~~~~~--p~~~~l~s~s-----~d~~v~iwd~~-~ 196 (393)
T 1erj_A 134 DGKFLATGAEDRLIRIWDIENRKIVMILQG-------HEQDIY--SLDYF--PSGDKLVSGS-----GDRTVRIWDLR-T 196 (393)
T ss_dssp TSSEEEEEETTSCEEEEETTTTEEEEEECC-------CSSCEE--EEEEC--TTSSEEEEEE-----TTSEEEEEETT-T
T ss_pred CCCEEEEEcCCCeEEEEECCCCcEEEEEcc-------CCCCEE--EEEEc--CCCCEEEEec-----CCCcEEEEECC-C
Confidence 566666666556799999987754332111 111111 22211 4677666655 23789999874 3
Q ss_pred CCEEEEecccHHHHHHhhhccccCCccEEEEee-CCEEEEEeecCCeEEEEECCCCce
Q 018005 286 GNWIEVERVPEMMCRKFMSVCYHNYDHVYCFWH-QGMICVCCYTWPEILYYNVARRTW 342 (362)
Q Consensus 286 ~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~v~~yd~~~~~w 342 (362)
+.-....... ......++.. ++.+++.+...+.+.+||+++++-
T Consensus 197 ~~~~~~~~~~-------------~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~ 241 (393)
T 1erj_A 197 GQCSLTLSIE-------------DGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFL 241 (393)
T ss_dssp TEEEEEEECS-------------SCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCE
T ss_pred CeeEEEEEcC-------------CCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcE
Confidence 3222111110 0011111221 344455555667788999887654
No 180
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=63.46 E-value=1e+02 Score=29.77 Aligned_cols=112 Identities=12% Similarity=0.050 Sum_probs=63.2
Q ss_pred CCceEEEecCCCCeEEEEeCCcCc--eeeccCCCCCC--------ccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCC
Q 018005 109 SKGLLCFSLPSSSSFLVCNLVTLS--SRTIDFPTYPF--------DFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTD 178 (362)
Q Consensus 109 ~~Gll~~~~~~~~~~~v~NP~t~~--w~~lP~~~~~~--------~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~ 178 (362)
.+|.|++... .+.++.+|+.|++ |..-+...... .....++... +|++.. ....+..+|.+|
T Consensus 69 ~~g~vyv~~~-~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g----~v~v~~---~dg~l~AlDa~T 140 (689)
T 1yiq_A 69 VDGVMYTTGP-FSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKG----KVYVGV---LDGRLEAIDAKT 140 (689)
T ss_dssp ETTEEEEECG-GGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETT----EEEEEC---TTSEEEEEETTT
T ss_pred ECCEEEEEcC-CCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECC----EEEEEc---cCCEEEEEECCC
Confidence 4677777653 4678899999988 65433221100 0011223221 455432 235788899877
Q ss_pred C--cccccccCCCCccccccCCCcccEEECCEEEEEecC-----CcEEEEEEcCCC--eeec
Q 018005 179 Q--SWSKFDIDGFPSMILSQSSHQEGVFYKGSLYFTTPE-----PFSIVRFDLENG--IWET 231 (362)
Q Consensus 179 ~--~W~~~~~~~~p~~~~~~~~~~~~v~~~G~ly~~~~~-----~~~i~~~D~~~~--~w~~ 231 (362)
+ .|+... .... .........++..+|.+|+-... ...+.+||.++. .|+.
T Consensus 141 G~~~W~~~~--~~~~-~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 199 (689)
T 1yiq_A 141 GQRAWSVDT--RADH-KRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRF 199 (689)
T ss_dssp CCEEEEEEC--CSCT-TSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred CCEeeeecC--cCCC-CCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEe
Confidence 6 487654 2111 01111234567889999986432 247999999865 5765
No 181
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=63.32 E-value=73 Score=27.46 Aligned_cols=59 Identities=10% Similarity=0.086 Sum_probs=31.5
Q ss_pred CCeEEEEeCCCCcccccccCCCCccccccCCCcccEEE--CCEEEEEecCCcEEEEEEcCCCeee
Q 018005 168 PNYAFVYDSTDQSWSKFDIDGFPSMILSQSSHQEGVFY--KGSLYFTTPEPFSIVRFDLENGIWE 230 (362)
Q Consensus 168 ~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~~~~v~~--~G~ly~~~~~~~~i~~~D~~~~~w~ 230 (362)
...+.+||..++.-.... .... ......-..+.+ +|...+.++...+|..+|+.+++-.
T Consensus 102 dg~v~lWd~~~~~~~~~~--~~~~--~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~ 162 (344)
T 4gqb_B 102 SGAVELWELDENETLIVS--KFCK--YEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVL 162 (344)
T ss_dssp TSEEEEEEECTTSSCEEE--EEEE--ECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE
T ss_pred CCEEEEEeccCCCceeEe--eccc--cCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence 468999998876432211 0000 000011122333 5766666666667999999887543
No 182
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=62.82 E-value=67 Score=26.84 Aligned_cols=137 Identities=12% Similarity=0.128 Sum_probs=65.3
Q ss_pred CCCeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCcccc-cccCCCCccccccC
Q 018005 119 SSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSK-FDIDGFPSMILSQS 197 (362)
Q Consensus 119 ~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~-~~~~~~p~~~~~~~ 197 (362)
.++.+.+||..+++....-... ......+.+.+.+ +.++.++ ....+.+||..++.=.. .. ..+
T Consensus 33 ~dg~v~lWd~~~~~~~~~~~~~-~~~v~~~~~~~~~---~~l~s~s--~d~~i~vwd~~~~~~~~~~~--~h~------- 97 (304)
T 2ynn_A 33 YSGRVELWNYETQVEVRSIQVT-ETPVRAGKFIARK---NWIIVGS--DDFRIRVFNYNTGEKVVDFE--AHP------- 97 (304)
T ss_dssp TTSEEEEEETTTTEEEEEEECC-SSCEEEEEEEGGG---TEEEEEE--TTSEEEEEETTTCCEEEEEE--CCS-------
T ss_pred CCCcEEEEECCCCceeEEeecc-CCcEEEEEEeCCC---CEEEEEC--CCCEEEEEECCCCcEEEEEe--CCC-------
Confidence 4578899999888743321111 1112233444332 2333333 34688999987764211 11 111
Q ss_pred CCcccEEE--CCEEEEEecCCcEEEEEEcCCC-eeecCCCCCcccccCCCCcccccceeecccCCCeEEEEEEeecCCcc
Q 018005 198 SHQEGVFY--KGSLYFTTPEPFSIVRFDLENG-IWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGIS 274 (362)
Q Consensus 198 ~~~~~v~~--~G~ly~~~~~~~~i~~~D~~~~-~w~~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~L~vv~~~~~~~~~ 274 (362)
..-..+.+ +|.+.+.++...++..+|+.+. .-...... ............ .++.+++.++ ..
T Consensus 98 ~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~-------h~~~v~~v~~~p---~~~~~l~sgs-----~D 162 (304)
T 2ynn_A 98 DYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEG-------HEHFVMCVAFNP---KDPSTFASGC-----LD 162 (304)
T ss_dssp SCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECC-------CCSCEEEEEECT---TCTTEEEEEE-----TT
T ss_pred CcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcc-------cCCcEEEEEECC---CCCCEEEEEe-----CC
Confidence 11112222 3555555555567889998764 22111001 111111111110 2566666665 23
Q ss_pred ceEEEEEECCC
Q 018005 275 TTMKLWELGCG 285 (362)
Q Consensus 275 ~~i~vw~l~~~ 285 (362)
.++.+|++...
T Consensus 163 ~~v~iwd~~~~ 173 (304)
T 2ynn_A 163 RTVKVWSLGQS 173 (304)
T ss_dssp SEEEEEETTCS
T ss_pred CeEEEEECCCC
Confidence 78999988533
No 183
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=62.16 E-value=70 Score=26.87 Aligned_cols=25 Identities=12% Similarity=0.046 Sum_probs=19.5
Q ss_pred CCEEEEEecCCcEEEEEEcCCCeee
Q 018005 206 KGSLYFTTPEPFSIVRFDLENGIWE 230 (362)
Q Consensus 206 ~G~ly~~~~~~~~i~~~D~~~~~w~ 230 (362)
++.+|+.+.....|.++|+.+.+..
T Consensus 10 ~~~~~v~~~~~~~v~~~d~~~~~~~ 34 (349)
T 1jmx_B 10 GHEYMIVTNYPNNLHVVDVASDTVY 34 (349)
T ss_dssp TCEEEEEEETTTEEEEEETTTTEEE
T ss_pred CCEEEEEeCCCCeEEEEECCCCcEE
Confidence 5778877776678999999887654
No 184
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=61.80 E-value=87 Score=27.82 Aligned_cols=192 Identities=13% Similarity=0.013 Sum_probs=96.6
Q ss_pred cCCceEEEecCCCCeEEEEeCCcCc----eeeccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCcccc
Q 018005 108 SSKGLLCFSLPSSSSFLVCNLVTLS----SRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSK 183 (362)
Q Consensus 108 s~~Gll~~~~~~~~~~~v~NP~t~~----w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~ 183 (362)
..+|.||+.....+.++.+++.... ...+.... -....+++++... -.|+++.. ....+++++.....-+.
T Consensus 121 ~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~-~~~p~glavD~~~--~~lY~~d~--~~~~I~~~~~~g~~~~~ 195 (400)
T 3p5b_L 121 VASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRD-IQAPDGLAVDWIH--SNIYWTDS--VLGTVSVADTKGVKRKT 195 (400)
T ss_dssp TTTTEEEEEETTTTEEEEEEC------CCCEEEECSS-CSCEEEEEEETTT--TEEEEEET--TTTEEEEECTTTCSEEE
T ss_pred eccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCC-CCCcccEEEEecC--CceEEEEC--CCCeEEEEeCCCCceEE
Confidence 3567777776556778888876521 22221111 0112345555322 25666543 34578888886654333
Q ss_pred cccCCCCccccccCCCcccEEE---CCEEEEEecC-CcEEEEEEcCCCeeecC-CCCCcccccCCCCcccccceeecccC
Q 018005 184 FDIDGFPSMILSQSSHQEGVFY---KGSLYFTTPE-PFSIVRFDLENGIWETP-NDANDHMTMMLPHELTFFRLVNDGEE 258 (362)
Q Consensus 184 ~~~~~~p~~~~~~~~~~~~v~~---~G~ly~~~~~-~~~i~~~D~~~~~w~~~-~~p~~~~~~~~p~~~~~~~lv~~~~~ 258 (362)
... . ......++.+ +|.+||.... ...|..+|++...-..+ .... ..|. .|... ..
T Consensus 196 l~~----~----~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l-----~~P~-----glavd-~~ 256 (400)
T 3p5b_L 196 LFR----E----NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENI-----QWPN-----GITLD-LL 256 (400)
T ss_dssp EEE----C----SSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSC-----SCEE-----EEEEE-TT
T ss_pred EEe----C----CCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCC-----CceE-----EEEEE-eC
Confidence 320 0 0112334555 5899999743 35799999875432221 1000 0222 23321 14
Q ss_pred CCeEEEEEEeecCCccceEEEEEECCCCCEEEEecccHHHHHHhhhccccCCccEEEEeeCCEEEEEeecCCeEEEEECC
Q 018005 259 SNKLYLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYTWPEILYYNVA 338 (362)
Q Consensus 259 ~G~L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~v~~yd~~ 338 (362)
+++||++.. ....|++..++.....+.+..-. .+ ..++.....++.||+.......|..+|..
T Consensus 257 ~~~lY~aD~-----~~~~I~~~d~dG~~~~~~~~~~~------~l------~~P~gl~v~~~~lywtd~~~~~V~~~~~~ 319 (400)
T 3p5b_L 257 SGRLYWVDS-----KLHSISSIDVNGGNRKTILEDEK------RL------AHPFSLAVFEDKVFWTDIINEAIFSANRL 319 (400)
T ss_dssp TTEEEEEET-----TTTEEEEEETTSCCCEEEEECSS------TT------SSEEEEEEETTEEEEEESSSCSEEEEESS
T ss_pred CCEEEEEEC-----CCCEEEEEeCCCCccEEEEeCCC------CC------CCCEEEEEeCCEEEEecCCCCeEEEEEcC
Confidence 688999865 34666766664322243332110 00 01222223567888887666778888866
Q ss_pred CC
Q 018005 339 RR 340 (362)
Q Consensus 339 ~~ 340 (362)
++
T Consensus 320 ~G 321 (400)
T 3p5b_L 320 TG 321 (400)
T ss_dssp SC
T ss_pred CC
Confidence 54
No 185
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=61.79 E-value=73 Score=26.92 Aligned_cols=153 Identities=10% Similarity=0.095 Sum_probs=69.7
Q ss_pred CCceEEEecCCCCeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCceEEEEEeee--cCCCeEEEEeCCCCcc----c
Q 018005 109 SKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAK--SFPNYAFVYDSTDQSW----S 182 (362)
Q Consensus 109 ~~Gll~~~~~~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~--~~~~~~~vy~s~~~~W----~ 182 (362)
.+|-.++.+..++.+.+||..+++....-. .......+.+.+.+ . .++..... .....+.+||..++.= .
T Consensus 84 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~~v~~~~~~~~~-~-~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~ 159 (369)
T 3zwl_B 84 CFTKYCVTGSADYSIKLWDVSNGQCVATWK--SPVPVKRVEFSPCG-N-YFLAILDNVMKNPGSINIYEIERDSATHELT 159 (369)
T ss_dssp TTSSEEEEEETTTEEEEEETTTCCEEEEEE--CSSCEEEEEECTTS-S-EEEEEECCBTTBCCEEEEEEEEECTTTCCEE
T ss_pred CCCCEEEEEeCCCeEEEEECCCCcEEEEee--cCCCeEEEEEccCC-C-EEEEecCCccCCCCEEEEEEecCCccceeec
Confidence 345333333346789999999887544332 12222334443322 2 22222211 1225788888755421 1
Q ss_pred ccccCCCCccccccC-C--CcccEEE--CCEEEEEecCCcEEEEEEcCC-Ceee-cCCCCCcccccCCCCcccccceeec
Q 018005 183 KFDIDGFPSMILSQS-S--HQEGVFY--KGSLYFTTPEPFSIVRFDLEN-GIWE-TPNDANDHMTMMLPHELTFFRLVND 255 (362)
Q Consensus 183 ~~~~~~~p~~~~~~~-~--~~~~v~~--~G~ly~~~~~~~~i~~~D~~~-~~w~-~~~~p~~~~~~~~p~~~~~~~lv~~ 255 (362)
... ..+....... . ....+.+ +|...+.+.....+..||+.+ ..-. .+. . ...... .+...
T Consensus 160 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~-------~~~~v~--~~~~~ 227 (369)
T 3zwl_B 160 KVS--EEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSID-L-------HEKSIS--DMQFS 227 (369)
T ss_dssp EEC--SSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEE-C-------CSSCEE--EEEEC
T ss_pred ccc--cceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEe-c-------CCCcee--EEEEC
Confidence 111 0010000000 0 1112222 455555555556899999987 3322 221 1 111111 22211
Q ss_pred ccCCCeEEEEEEeecCCccceEEEEEECC
Q 018005 256 GEESNKLYLIGGVGRNGISTTMKLWELGC 284 (362)
Q Consensus 256 ~~~~G~L~vv~~~~~~~~~~~i~vw~l~~ 284 (362)
-+|++++++. ....+.+|++..
T Consensus 228 --~~~~~l~~~~-----~d~~i~v~d~~~ 249 (369)
T 3zwl_B 228 --PDLTYFITSS-----RDTNSFLVDVST 249 (369)
T ss_dssp --TTSSEEEEEE-----TTSEEEEEETTT
T ss_pred --CCCCEEEEec-----CCceEEEEECCC
Confidence 4677776665 236789998753
No 186
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=59.94 E-value=91 Score=27.45 Aligned_cols=56 Identities=5% Similarity=0.018 Sum_probs=30.8
Q ss_pred CCeEEEEeCCCCcccccccCCCCccccccCCCcccEEE--CCEEEEEecCCcEEEEEEcCCCee
Q 018005 168 PNYAFVYDSTDQSWSKFDIDGFPSMILSQSSHQEGVFY--KGSLYFTTPEPFSIVRFDLENGIW 229 (362)
Q Consensus 168 ~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~~~~v~~--~G~ly~~~~~~~~i~~~D~~~~~w 229 (362)
...+.+||..++.-...- ..+. ....-..+.+ +|...+.+.....|..||+.+.+.
T Consensus 191 d~~i~iwd~~~~~~~~~~--~~~~----h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~ 248 (437)
T 3gre_A 191 LSRVIIFDIRTLERLQII--ENSP----RHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVL 248 (437)
T ss_dssp TSEEEEEETTTCCEEEEE--ECCG----GGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEE
T ss_pred CCeEEEEeCCCCeeeEEE--ccCC----CCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccE
Confidence 468999999775421111 0010 0011223333 566666666666799999987654
No 187
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=59.05 E-value=43 Score=27.68 Aligned_cols=66 Identities=15% Similarity=0.031 Sum_probs=36.5
Q ss_pred ECCEEEEEecCCcEEEEEEcCCCeeecCCCCCcccccCCCCcccccceeecccCCCeEEEEEEeecCCccceEEEEEECC
Q 018005 205 YKGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGISTTMKLWELGC 284 (362)
Q Consensus 205 ~~G~ly~~~~~~~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~L~vv~~~~~~~~~~~i~vw~l~~ 284 (362)
.+|...+.++....+..||+.+......... .......... . -+|++.+++. ....+.+|.+..
T Consensus 27 ~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~-------~~~~v~~~~~--~--~~~~~l~~~~-----~dg~i~~~~~~~ 90 (313)
T 3odt_A 27 VDDSKVASVSRDGTVRLWSKDDQWLGTVVYT-------GQGFLNSVCY--D--SEKELLLFGG-----KDTMINGVPLFA 90 (313)
T ss_dssp EETTEEEEEETTSEEEEEEESSSEEEEEEEE-------CSSCEEEEEE--E--TTTTEEEEEE-----TTSCEEEEETTC
T ss_pred cCCCEEEEEEcCCcEEEEECCCCEEEEEeec-------CCccEEEEEE--C--CCCCEEEEec-----CCCeEEEEEeee
Confidence 3555555555556789999977654332101 1121222222 2 5777777766 236788998865
Q ss_pred CC
Q 018005 285 GG 286 (362)
Q Consensus 285 ~~ 286 (362)
..
T Consensus 91 ~~ 92 (313)
T 3odt_A 91 TS 92 (313)
T ss_dssp CT
T ss_pred cC
Confidence 43
No 188
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=58.61 E-value=1.5e+02 Score=29.38 Aligned_cols=118 Identities=14% Similarity=0.061 Sum_probs=61.9
Q ss_pred cccEEE---CCEEEEEecCCcEEEEEEcCCCeeecCCCCCcccccCCCCcccccceeecccCCCeEEEEEEeecCCccce
Q 018005 200 QEGVFY---KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGISTT 276 (362)
Q Consensus 200 ~~~v~~---~G~ly~~~~~~~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~L~vv~~~~~~~~~~~ 276 (362)
..++++ +|.|||.......|.++|+....-..+.... +. .-..|++. -.+|.||+... +....
T Consensus 473 P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~------l~---~P~gIaVD-p~~g~LYwtD~----g~~~~ 538 (791)
T 3m0c_C 473 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREN------GS---KPRAIVVD-PVHGFMYWTDW----GTPAK 538 (791)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECT------TC---CEEEEEEE-TTTTEEEEEEC----SSSCE
T ss_pred cceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCC------CC---CcceEEEe-cCCCCEEEecC----CCCCe
Confidence 445666 4699999887778999999865443321110 11 11234421 14688998864 12245
Q ss_pred EEEEEECCCCC-EEEEecccHHHHHHhhhccccCCccEEEEe-eCCEEEEEeecCCeEEEEECCCCceEEc
Q 018005 277 MKLWELGCGGN-WIEVERVPEMMCRKFMSVCYHNYDHVYCFW-HQGMICVCCYTWPEILYYNVARRTWHWL 345 (362)
Q Consensus 277 i~vw~l~~~~~-W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~v~~yd~~~~~w~~~ 345 (362)
|++..+ +++ =+.+..- .+ ....-.++. .++.||+.......|.++|+....-+.+
T Consensus 539 I~~~~~--dG~~~~~lv~~------~l------~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v 595 (791)
T 3m0c_C 539 IKKGGL--NGVDIYSLVTE------NI------QWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTI 595 (791)
T ss_dssp EEEEET--TSCCEEEEECS------SC------SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred EEEEec--CCCceEEEEeC------CC------CCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEE
Confidence 555544 343 2211110 00 011111222 4578888876666788888876544443
No 189
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=57.29 E-value=1e+02 Score=27.26 Aligned_cols=104 Identities=15% Similarity=0.260 Sum_probs=51.0
Q ss_pred CCEEEEEecCCcEEEEEEcCCCee-ecCC-CCCcccccCCCCcccccceeecccCCCe-EEEEEEeecCCccceEEEEEE
Q 018005 206 KGSLYFTTPEPFSIVRFDLENGIW-ETPN-DANDHMTMMLPHELTFFRLVNDGEESNK-LYLIGGVGRNGISTTMKLWEL 282 (362)
Q Consensus 206 ~G~ly~~~~~~~~i~~~D~~~~~w-~~~~-~p~~~~~~~~p~~~~~~~lv~~~~~~G~-L~vv~~~~~~~~~~~i~vw~l 282 (362)
++.+.+.+.....|..||+.+..- ..+. ... ........... -+|+ +++++. ....+.+|.+
T Consensus 243 ~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~------~~~~v~~i~~~----p~~~~~l~tg~-----~dg~v~vwd~ 307 (430)
T 2xyi_A 243 HESLFGSVADDQKLMIWDTRNNNTSKPSHTVDA------HTAEVNCLSFN----PYSEFILATGS-----ADKTVALWDL 307 (430)
T ss_dssp CTTEEEEEETTSEEEEEETTCSCSSSCSEEEEC------CSSCEEEEEEC----SSCTTEEEEEE-----TTSEEEEEET
T ss_pred CCCEEEEEeCCCeEEEEECCCCCCCcceeEeec------CCCCeEEEEeC----CCCCCEEEEEe-----CCCeEEEEeC
Confidence 455665665556899999986521 1100 000 11111121221 3454 666665 2367999988
Q ss_pred CCCCC-EEEEecccHHHHHHhhhccccCCccEEEE-e--eCCEEEEEeecCCeEEEEECCC
Q 018005 283 GCGGN-WIEVERVPEMMCRKFMSVCYHNYDHVYCF-W--HQGMICVCCYTWPEILYYNVAR 339 (362)
Q Consensus 283 ~~~~~-W~~v~~~p~~~~~~~~~~~~~~~~~~~~~-~--~~~~i~~~~~~~~~v~~yd~~~ 339 (362)
...+. -..... +...+.++ . .+..+++.+...+.|.+||+++
T Consensus 308 ~~~~~~~~~~~~---------------h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~ 353 (430)
T 2xyi_A 308 RNLKLKLHSFES---------------HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 353 (430)
T ss_dssp TCTTSCSEEEEC---------------CSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGG
T ss_pred CCCCCCeEEeec---------------CCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCC
Confidence 64332 111110 11122222 1 2334566655667788888876
No 190
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=56.81 E-value=73 Score=30.12 Aligned_cols=31 Identities=16% Similarity=0.485 Sum_probs=23.9
Q ss_pred cccEEECCEEEEEecCCcEEEEEEcCC--Ceeec
Q 018005 200 QEGVFYKGSLYFTTPEPFSIVRFDLEN--GIWET 231 (362)
Q Consensus 200 ~~~v~~~G~ly~~~~~~~~i~~~D~~~--~~w~~ 231 (362)
..+++.+|++|+.+... .+.++|.++ ..|+.
T Consensus 62 ~~P~v~~g~vyv~~~~~-~v~AlD~~tG~~~W~~ 94 (582)
T 1flg_A 62 SQAIVSDGVIYVTASYS-RLFALDAKTGKRLWTY 94 (582)
T ss_dssp CCCEEETTEEEEEETTT-EEEEEESSSCCEEEEE
T ss_pred eccEEECCEEEEEcCCC-CEEEEECCCCcEEEEE
Confidence 45788999999887644 499999875 47876
No 191
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=56.28 E-value=1.1e+02 Score=27.39 Aligned_cols=148 Identities=8% Similarity=0.071 Sum_probs=79.2
Q ss_pred CCceEEEecCCCCeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCceEEEEEeeecCC--CeEEEEeCCCCccccccc
Q 018005 109 SKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFP--NYAFVYDSTDQSWSKFDI 186 (362)
Q Consensus 109 ~~Gll~~~~~~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~--~~~~vy~s~~~~W~~~~~ 186 (362)
.+|.|++.... ..+.++|+.+++...+.... ..-.+++++..+. .+++....... ..+.+++. .+.+....
T Consensus 148 ~~g~Lyv~d~~-~~I~~id~~~~~v~~~~~~~--~~P~~ia~d~~G~--~lyvad~~~~~~~~~v~~~~~-~g~~~~~~- 220 (430)
T 3tc9_A 148 NHNHLYLVGEQ-HPTRLIDFEKEYVSTVYSGL--SKVRTICWTHEAD--SMIITNDQNNNDRPNNYILTR-ESGFKVIT- 220 (430)
T ss_dssp EEEEEEEEEBT-EEEEEEETTTTEEEEEECCC--SCEEEEEECTTSS--EEEEEECCSCTTSEEEEEEEG-GGTSCSEE-
T ss_pred CCCeEEEEeCC-CcEEEEECCCCEEEEEecCC--CCcceEEEeCCCC--EEEEEeCCCCcccceEEEEeC-CCceeeee-
Confidence 35777766543 78899999998876664311 1123455543322 46665543222 24555554 34443222
Q ss_pred CCCCccccccCCCcccEEE---CCEEEEEecCCcEEEEEEcCCCeeecCCCCCcccccCCCCcccccceeecccCCCe-E
Q 018005 187 DGFPSMILSQSSHQEGVFY---KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNK-L 262 (362)
Q Consensus 187 ~~~p~~~~~~~~~~~~v~~---~G~ly~~~~~~~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~-L 262 (362)
.++ ......++.+ +|.+|+.......|..||+.+.....+. . .+.......+... -+|+ |
T Consensus 221 -~l~-----~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~-~-------~~~~~~P~gia~~--pdG~~l 284 (430)
T 3tc9_A 221 -ELT-----KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLF-T-------IQDSGWEFHIQFH--PSGNYA 284 (430)
T ss_dssp -EEE-----ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEE-E-------CSSSSCCEEEEEC--TTSSEE
T ss_pred -eec-----cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEE-E-------cCCCCcceeEEEc--CCCCEE
Confidence 111 1123345555 6899998876678999999876552211 0 1111111123322 4676 8
Q ss_pred EEEEEeecCCccceEEEEEECC
Q 018005 263 YLIGGVGRNGISTTMKLWELGC 284 (362)
Q Consensus 263 ~vv~~~~~~~~~~~i~vw~l~~ 284 (362)
|++.. ....|.++.++.
T Consensus 285 yv~d~-----~~~~I~~~~~d~ 301 (430)
T 3tc9_A 285 YIVVV-----NQHYILRSDYDW 301 (430)
T ss_dssp EEEET-----TTTEEEEEEEET
T ss_pred EEEEC-----CCCEEEEEeCCc
Confidence 88764 346677776654
No 192
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=55.70 E-value=1.4e+02 Score=28.20 Aligned_cols=193 Identities=10% Similarity=-0.030 Sum_probs=93.2
Q ss_pred CeEEEEeCCc------Cceeecc-CCCCCCccceEEEEeCCCceEEEEEeeec-----CCCeEEEEeCC-CCcccccccC
Q 018005 121 SSFLVCNLVT------LSSRTID-FPTYPFDFELLTLVSTPSGYKIFMLFAKS-----FPNYAFVYDST-DQSWSKFDID 187 (362)
Q Consensus 121 ~~~~v~NP~t------~~w~~lP-~~~~~~~~~~~~~~~~~~~ykv~~~~~~~-----~~~~~~vy~s~-~~~W~~~~~~ 187 (362)
..++++|..+ ++...+. .-. .......+.+++. .|+...... ....+.++|.. ++.+....
T Consensus 161 ~~i~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~SpDG~--~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~-- 234 (662)
T 3azo_A 161 RFLAAVPLDGSAAADRSAVRELSDDAH--RFVTGPRLSPDGR--QAVWLAWDHPRMPWEGTELKTARVTEDGRFADTR-- 234 (662)
T ss_dssp EEEEEEETTSTTTTCGGGSEESSCSCS--SEECCCEECTTSS--EEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEE--
T ss_pred eEEEEEECCCCccccCCceeEEEecCC--CcccCceECCCCC--EEEEEECCCCCCCCCCcEEEEEEECCCCcccccE--
Confidence 4789999998 7766665 221 1112233433322 333333222 12478899988 56332222
Q ss_pred CCCccccccCCCcccEEE-CCEEEEEecCC--cEEEEEEcCCCeeecCCCCCcccccCCCCccc-ccceeecccCCCeEE
Q 018005 188 GFPSMILSQSSHQEGVFY-KGSLYFTTPEP--FSIVRFDLENGIWETPNDANDHMTMMLPHELT-FFRLVNDGEESNKLY 263 (362)
Q Consensus 188 ~~p~~~~~~~~~~~~v~~-~G~ly~~~~~~--~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~-~~~lv~~~~~~G~L~ 263 (362)
.+.. .. ........+. +|++|+.+... ..|..+|+++.++..+. +.+.... .|.-.. ...+... -+|+++
T Consensus 235 ~l~~-~~-~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~-~~~~~~~-~p~w~~~~~~~~~~--~~~~~~ 308 (662)
T 3azo_A 235 TLLG-GP-EEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLC-RREEEFA-GPLWTPGMRWFAPL--ANGLIA 308 (662)
T ss_dssp EEEE-ET-TBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESS-CCSSBSS-CCCCSTTCCSEEEC--TTSCEE
T ss_pred EeCC-CC-CceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecc-ccccccc-CccccccCceEeEe--CCCEEE
Confidence 1111 00 0011122223 68888876543 37889998777776542 2100000 010000 1122211 367777
Q ss_pred EEEEeecCCccceEEEEEECCCC-CEEEEecccHHHHHHhhhccccCCccEEE--EeeCCEEEEEeecC---CeEEEEEC
Q 018005 264 LIGGVGRNGISTTMKLWELGCGG-NWIEVERVPEMMCRKFMSVCYHNYDHVYC--FWHQGMICVCCYTW---PEILYYNV 337 (362)
Q Consensus 264 vv~~~~~~~~~~~i~vw~l~~~~-~W~~v~~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~---~~v~~yd~ 337 (362)
+... . ....+|.++..+ ....+.. + ...+.. ...++.+++..... ..++.+|+
T Consensus 309 ~~~~-----~-~~~~l~~~d~~~~~~~~l~~-~--------------~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~ 367 (662)
T 3azo_A 309 VVHG-----K-GAAVLGILDPESGELVDAAG-P--------------WTEWAATLTVSGTRAVGVAASPRTAYEVVELDT 367 (662)
T ss_dssp EEEB-----S-SSCEEEEEETTTTEEEECCS-S--------------CCEEEEEEEEETTEEEEEEEETTEEEEEEEEET
T ss_pred EEEE-----c-CccEEEEEECCCCcEEEecC-C--------------CCeEEEEEecCCCEEEEEEcCCCCCCEEEEEEC
Confidence 6654 2 566888876543 3433321 0 011112 23455555543222 25888899
Q ss_pred CCCceEEcC
Q 018005 338 ARRTWHWLP 346 (362)
Q Consensus 338 ~~~~w~~~~ 346 (362)
++++.+.+.
T Consensus 368 ~~g~~~~l~ 376 (662)
T 3azo_A 368 VTGRARTIG 376 (662)
T ss_dssp TTCCEEEEE
T ss_pred CCCceEEee
Confidence 998888773
No 193
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=55.60 E-value=95 Score=26.29 Aligned_cols=147 Identities=7% Similarity=0.052 Sum_probs=69.9
Q ss_pred CCeEEEEeCCCCcccccccCCCCccccccCCCcccEEE--CCEEEEEecCCcEEEEEEcCCCe-----eecCCCCCcccc
Q 018005 168 PNYAFVYDSTDQSWSKFDIDGFPSMILSQSSHQEGVFY--KGSLYFTTPEPFSIVRFDLENGI-----WETPNDANDHMT 240 (362)
Q Consensus 168 ~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~~~~v~~--~G~ly~~~~~~~~i~~~D~~~~~-----w~~~~~p~~~~~ 240 (362)
...+.+|+..++...... .+.. .- ....-..+.+ +|.+...+....++..+|..+.. +..+. .
T Consensus 33 D~~i~lw~~~~~~~~~~~--~~~~-~~-h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~-~----- 102 (330)
T 2hes_X 33 DRKIKLVSVKYDDFTLID--VLDE-TA-HKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLA-I----- 102 (330)
T ss_dssp SSCEEEEECSSSCCEEEE--EECT-TC-CCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEE-E-----
T ss_pred CCEEEEEEecCCCeEEEE--EEec-CC-ccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEE-E-----
Confidence 457889998776554332 1100 00 0011122223 46665556555578888885321 11110 0
Q ss_pred cCCCC-cccccceeecccCCCeEEEEEEeecCCccceEEEEEECCCC-CEEEEecccHHHHHHhhhccccCCccEEEE--
Q 018005 241 MMLPH-ELTFFRLVNDGEESNKLYLIGGVGRNGISTTMKLWELGCGG-NWIEVERVPEMMCRKFMSVCYHNYDHVYCF-- 316 (362)
Q Consensus 241 ~~~p~-~~~~~~lv~~~~~~G~L~vv~~~~~~~~~~~i~vw~l~~~~-~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~-- 316 (362)
+.. ...-..+... -+|++++.+. ...++.+|+++..+ .++.+..+. .+...+.++
T Consensus 103 --~~~h~~~V~~v~~s--p~g~~las~s-----~D~~v~iwd~~~~~~~~~~~~~~~------------~h~~~v~~v~~ 161 (330)
T 2hes_X 103 --IEGHENEVKGVAWS--NDGYYLATCS-----RDKSVWIWETDESGEEYECISVLQ------------EHSQDVKHVIW 161 (330)
T ss_dssp --EC----CEEEEEEC--TTSCEEEEEE-----TTSCEEEEECCTTCCCCEEEEEEC------------CCSSCEEEEEE
T ss_pred --EcCCCCcEEEEEEC--CCCCEEEEEe-----CCCEEEEEeccCCCCCeEEEEEec------------cCCCceEEEEE
Confidence 110 0011122211 4677666665 23789999985443 366555442 111223332
Q ss_pred eeCCEEEEEeecCCeEEEEECCCCceEEc
Q 018005 317 WHQGMICVCCYTWPEILYYNVARRTWHWL 345 (362)
Q Consensus 317 ~~~~~i~~~~~~~~~v~~yd~~~~~w~~~ 345 (362)
..++.+++.....+.+.+||..++.|+.+
T Consensus 162 ~p~~~~l~s~s~D~~i~iW~~~~~~~~~~ 190 (330)
T 2hes_X 162 HPSEALLASSSYDDTVRIWKDYDDDWECV 190 (330)
T ss_dssp CSSSSEEEEEETTSCEEEEEEETTEEEEE
T ss_pred CCCCCEEEEEcCCCeEEEEECCCCCeeEE
Confidence 22333455555566788888887766544
No 194
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=55.06 E-value=1e+02 Score=26.50 Aligned_cols=214 Identities=11% Similarity=0.059 Sum_probs=91.9
Q ss_pred eEEEecCCCCeEEEEeCCcCc------eeeccCCCCC---CccceEEEE----eCCCceEEEEEeeecCCCeEEEEeCCC
Q 018005 112 LLCFSLPSSSSFLVCNLVTLS------SRTIDFPTYP---FDFELLTLV----STPSGYKIFMLFAKSFPNYAFVYDSTD 178 (362)
Q Consensus 112 ll~~~~~~~~~~~v~NP~t~~------w~~lP~~~~~---~~~~~~~~~----~~~~~ykv~~~~~~~~~~~~~vy~s~~ 178 (362)
-.++.+..++.+.+||..+++ +..+...... .....+.+. +. ..+. ++.++ ....+.+||..+
T Consensus 82 ~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~-l~~~~--~dg~i~iwd~~~ 157 (397)
T 1sq9_A 82 CLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRL-LSHR-LVATD--VKGTTYIWKFHP 157 (397)
T ss_dssp EEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC-----CEE-EEEEE--TTSCEEEEEEES
T ss_pred cEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCC-CceE-EEEEe--CCCcEEEEeCCc
Confidence 333333346789999999888 5555433211 223344454 22 2221 33333 235788888766
Q ss_pred ------Cc---ccccccCCCCc---cccccCCCcccEEE--CCEEEEEecCCcEEEEEEcCCCeeec-CCCCCcccccCC
Q 018005 179 ------QS---WSKFDIDGFPS---MILSQSSHQEGVFY--KGSLYFTTPEPFSIVRFDLENGIWET-PNDANDHMTMML 243 (362)
Q Consensus 179 ------~~---W~~~~~~~~p~---~~~~~~~~~~~v~~--~G~ly~~~~~~~~i~~~D~~~~~w~~-~~~p~~~~~~~~ 243 (362)
+. |.... .+.. ...........+.+ +| +.+.+.....+..||+.+.+-.. +.....+ .
T Consensus 158 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h----~ 230 (397)
T 1sq9_A 158 FADESNSLTLNWSPTL--ELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSM----I 230 (397)
T ss_dssp SSSHHHHTTTCCCCEE--EEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC-------
T ss_pred cccccccceeeccCcc--eeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccc----c
Confidence 22 11110 0000 00000111223333 46 55555555689999998764332 1110000 0
Q ss_pred CCcccccceeecccCCCeEEEEEEeecCCccceEEEEEECCCCCEEEEecccHHHHHHhhhccccCCccEEEE--eeCCE
Q 018005 244 PHELTFFRLVNDGEESNKLYLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCF--WHQGM 321 (362)
Q Consensus 244 p~~~~~~~lv~~~~~~G~L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~ 321 (362)
+....-..+... -+|++++++... .....+.+|++.....-..+.. +......... .+.....+.++ ..++.
T Consensus 231 ~~~~~i~~i~~~--~~~~~l~~~~~d--~~~g~i~i~d~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~v~~~~~~~~~~ 304 (397)
T 1sq9_A 231 NNSNSIRSVKFS--PQGSLLAIAHDS--NSFGCITLYETEFGERIGSLSV-PTHSSQASLG-EFAHSSWVMSLSFNDSGE 304 (397)
T ss_dssp CCCCCEEEEEEC--SSTTEEEEEEEE--TTEEEEEEEETTTCCEEEEECB-C--------C-CBSBSSCEEEEEECSSSS
T ss_pred ccCCccceEEEC--CCCCEEEEEecC--CCCceEEEEECCCCcccceecc-Cccccccccc-ccccCCcEEEEEECCCCC
Confidence 001111122211 467777776531 1126799998853322111111 0000000000 00011223332 22333
Q ss_pred EEEEeecCCeEEEEECCCCce
Q 018005 322 ICVCCYTWPEILYYNVARRTW 342 (362)
Q Consensus 322 i~~~~~~~~~v~~yd~~~~~w 342 (362)
.++.....+.+.+||+++.+-
T Consensus 305 ~l~~~~~dg~i~iwd~~~~~~ 325 (397)
T 1sq9_A 305 TLCSAGWDGKLRFWDVKTKER 325 (397)
T ss_dssp EEEEEETTSEEEEEETTTTEE
T ss_pred EEEEEeCCCeEEEEEcCCCce
Confidence 444455667899999988743
No 195
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=55.04 E-value=1.2e+02 Score=27.30 Aligned_cols=207 Identities=9% Similarity=-0.010 Sum_probs=99.1
Q ss_pred CceEEEecCCCCeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCceEEEEEeeecC--CCeEEEEeCCCCcccccccC
Q 018005 110 KGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSF--PNYAFVYDSTDQSWSKFDID 187 (362)
Q Consensus 110 ~Gll~~~~~~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~--~~~~~vy~s~~~~W~~~~~~ 187 (362)
+|-|++.... ..+.+++|.+++...+.... ..-.+++++..+. +++...... ...+..++.. +.+....
T Consensus 152 ~g~Lyv~D~~-~~I~~id~~~g~v~~~~~~~--~~P~giavd~dG~---lyVad~~~~~~~~gv~~~~~~-~~~~~~~-- 222 (433)
T 4hw6_A 152 YDDLYWVGQR-DAFRHVDFVNQYVDIKTTNI--GQCADVNFTLNGD---MVVVDDQSSDTNTGIYLFTRA-SGFTERL-- 222 (433)
T ss_dssp TCEEEEECBT-SCEEEEETTTTEEEEECCCC--SCEEEEEECTTCC---EEEEECCSCTTSEEEEEECGG-GTTCCEE--
T ss_pred CCEEEEEeCC-CCEEEEECCCCEEEEeecCC--CCccEEEECCCCC---EEEEcCCCCcccceEEEEECC-CCeeccc--
Confidence 5777776543 78999999999877765411 1123455554433 555443211 1234444432 2232111
Q ss_pred CCCccccccCCCcccEEE---CCEEEEEecCCcEEEEEEcCCCee-ecCCCCCcccccCCCCcccccceeecccCCCe-E
Q 018005 188 GFPSMILSQSSHQEGVFY---KGSLYFTTPEPFSIVRFDLENGIW-ETPNDANDHMTMMLPHELTFFRLVNDGEESNK-L 262 (362)
Q Consensus 188 ~~p~~~~~~~~~~~~v~~---~G~ly~~~~~~~~i~~~D~~~~~w-~~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~-L 262 (362)
.++ ......++.+ +|.+|+.......|..||+.+... ..+... .+... ...+... -+|+ |
T Consensus 223 ~~~-----~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~-------~~~~~-~~~ia~d--pdG~~L 287 (433)
T 4hw6_A 223 SLC-----NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMM-------DTKGS-NFHIVWH--PTGDWA 287 (433)
T ss_dssp EEE-----ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEEC-------SCCSS-CEEEEEC--TTSSEE
T ss_pred ccc-----ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEecc-------CCCCC-cccEEEe--CCCCEE
Confidence 011 1122334444 689998877666899999986654 221101 11111 1123322 4565 8
Q ss_pred EEEEEeecCCccceEEEEEECCCCC-E----EEEecccHHHH-HHhhhccccCCccEEEE---------eeCCEEEEEee
Q 018005 263 YLIGGVGRNGISTTMKLWELGCGGN-W----IEVERVPEMMC-RKFMSVCYHNYDHVYCF---------WHQGMICVCCY 327 (362)
Q Consensus 263 ~vv~~~~~~~~~~~i~vw~l~~~~~-W----~~v~~~p~~~~-~~~~~~~~~~~~~~~~~---------~~~~~i~~~~~ 327 (362)
|+... ....|.++.++.... . .........-+ +............-.++ ..++.||+...
T Consensus 288 Yvad~-----~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~ 362 (433)
T 4hw6_A 288 YIIYN-----GKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDR 362 (433)
T ss_dssp EEEET-----TTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEET
T ss_pred EEEeC-----CCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEEC
Confidence 88864 235566655543221 1 11111100000 00000000011111233 34567999887
Q ss_pred cCCeEEEEECCCCceEEcC
Q 018005 328 TWPEILYYNVARRTWHWLP 346 (362)
Q Consensus 328 ~~~~v~~yd~~~~~w~~~~ 346 (362)
....|..+|+ +++...+.
T Consensus 363 ~n~~I~~~~~-~G~v~t~~ 380 (433)
T 4hw6_A 363 DSHTVRVLTP-EGRVTTYA 380 (433)
T ss_dssp TTTEEEEECT-TSEEEEEE
T ss_pred CCCEEEEECC-CCCEEEEE
Confidence 7778999996 55666554
No 196
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=55.02 E-value=1.3e+02 Score=27.72 Aligned_cols=111 Identities=7% Similarity=0.051 Sum_probs=53.3
Q ss_pred EEEEecCCcEEEEEEcCCCeeecCCCCCcccccCCCC-cccccceeecccCC-CeEEEEEEeecCCccceEEEEEECCCC
Q 018005 209 LYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPH-ELTFFRLVNDGEES-NKLYLIGGVGRNGISTTMKLWELGCGG 286 (362)
Q Consensus 209 ly~~~~~~~~i~~~D~~~~~w~~~~~p~~~~~~~~p~-~~~~~~lv~~~~~~-G~L~vv~~~~~~~~~~~i~vw~l~~~~ 286 (362)
+.+.+.....+..||..+.+....... ... +..-..+... -+ |++++.+. ....+.+|.+.. +
T Consensus 175 ~l~~~~~d~~v~vwd~~~~~~~~~~~~-------~~~~~~~v~~~~~~--~~~~~~l~~~~-----~dg~i~vwd~~~-~ 239 (615)
T 1pgu_A 175 RSMTVGDDGSVVFYQGPPFKFSASDRT-------HHKQGSFVRDVEFS--PDSGEFVITVG-----SDRKISCFDGKS-G 239 (615)
T ss_dssp EEEEEETTTEEEEEETTTBEEEEEECS-------SSCTTCCEEEEEEC--STTCCEEEEEE-----TTCCEEEEETTT-C
T ss_pred EEEEEeCCCcEEEEeCCCcceeeeecc-------cCCCCceEEEEEEC--CCCCCEEEEEe-----CCCeEEEEECCC-C
Confidence 444455555889999877654331101 111 0011122211 45 77777765 236899998743 3
Q ss_pred CEEEEecccHHHHHHhhhccccCCccEEEE-eeCCEEEEEeecCCeEEEEECCCCceEE
Q 018005 287 NWIEVERVPEMMCRKFMSVCYHNYDHVYCF-WHQGMICVCCYTWPEILYYNVARRTWHW 344 (362)
Q Consensus 287 ~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~v~~yd~~~~~w~~ 344 (362)
.- +..+... .. .....+.++ ..++..++.....+.+.+||+++++-..
T Consensus 240 ~~--~~~~~~~----~~----~~~~~v~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~ 288 (615)
T 1pgu_A 240 EF--LKYIEDD----QE----PVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQ 288 (615)
T ss_dssp CE--EEECCBT----TB----CCCSCEEEEEESSSSEEEEEETTSEEEEEETTTTEEEE
T ss_pred CE--eEEeccc----cc----ccCCceEEEEEcCCCEEEEEcCCCcEEEEECCCCcEEE
Confidence 31 2222000 00 011122222 1144445555556789999999875443
No 197
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=54.77 E-value=1.6e+02 Score=28.73 Aligned_cols=229 Identities=7% Similarity=0.053 Sum_probs=113.0
Q ss_pred eeeeeeCCCCCeEeecCCc-----CCCCCCceEEEecCCce-EEEecCCCCeEEEEeCCcCceeeccCCCCC---Cccce
Q 018005 77 QYPLYDSTHGTWRRLSLPY-----SLLLPSAATLLSSSKGL-LCFSLPSSSSFLVCNLVTLSSRTIDFPTYP---FDFEL 147 (362)
Q Consensus 77 ~~~~~d~~~~~w~~~~~~~-----~~~~~~~~~~~~s~~Gl-l~~~~~~~~~~~v~NP~t~~w~~lP~~~~~---~~~~~ 147 (362)
.+..||+..+.+....... .++...-..+....+|- |.+.. ..+.++++|+.++++..+...... ....+
T Consensus 378 Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt-~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~ 456 (795)
T 4a2l_A 378 GLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGT-HAGGLSILHRNSGQVENFNQRNSQLVNENVYA 456 (795)
T ss_dssp CEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEE-TTTEEEEEETTTCCEEEECTTTSCCSCSCEEE
T ss_pred CeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEe-CcCceeEEeCCCCcEEEeecCCCCcCCCeeEE
Confidence 4556777776666554221 12111111222234554 55543 236789999999998877642111 11122
Q ss_pred EEEEeCCCceEEEEEeeecCCCeEEEEeCCCCcccccccCCCCccccccCCCcccEEE--CCEEEEEecCCcEEEEEEcC
Q 018005 148 LTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILSQSSHQEGVFY--KGSLYFTTPEPFSIVRFDLE 225 (362)
Q Consensus 148 ~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~~~~v~~--~G~ly~~~~~~~~i~~~D~~ 225 (362)
+..+.. . .+.+ +.. ..+.+|+..++.|+.......+. .+.. .....++. +|.+++-+. ..+..||+.
T Consensus 457 i~~d~~--g-~lwi-gt~---~Gl~~~~~~~~~~~~~~~~~~~~-~~~~-~~i~~i~~d~~g~lWigt~--~Gl~~~~~~ 525 (795)
T 4a2l_A 457 ILPDGE--G-NLWL-GTL---SALVRFNPEQRSFTTIEKEKDGT-PVVS-KQITTLFRDSHKRLWIGGE--EGLSVFKQE 525 (795)
T ss_dssp EEECSS--S-CEEE-EES---SCEEEEETTTTEEEECCBCTTCC-BCCC-CCEEEEEECTTCCEEEEES--SCEEEEEEE
T ss_pred EEECCC--C-CEEE-Eec---CceeEEeCCCCeEEEcccccccc-ccCC-ceEEEEEECCCCCEEEEeC--CceEEEeCC
Confidence 222221 1 2332 221 35889999999887665100011 1111 11122333 477665444 369999999
Q ss_pred CCeeecCCC-CCcccccCCCCcccccceeecccCCCeEEEEEEeecCCccceEEEEEECCCCC-EEEEecccHHHHHHhh
Q 018005 226 NGIWETPND-ANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGISTTMKLWELGCGGN-WIEVERVPEMMCRKFM 303 (362)
Q Consensus 226 ~~~w~~~~~-p~~~~~~~~p~~~~~~~lv~~~~~~G~L~vv~~~~~~~~~~~i~vw~l~~~~~-W~~v~~~p~~~~~~~~ 303 (362)
++++ .+.. .. ... ++.. .-..+... .+|.|++... .. +++++..+. ++...... . +
T Consensus 526 ~~~~-~~~~~~~--~~~-l~~~-~i~~i~~d--~~g~lWigT~-------~G--l~~~d~~~~~~~~~~~~~-----g-l 583 (795)
T 4a2l_A 526 GLDI-QKASILP--VSN-VTKL-FTNCIYEA--SNGIIWVGTR-------EG--FYCFNEKDKQIKRYNTTN-----G-L 583 (795)
T ss_dssp TTEE-EECCCSC--SCG-GGGS-CEEEEEEC--TTSCEEEEES-------SC--EEEEETTTTEEEEECGGG-----T-C
T ss_pred CCeE-EEecCCC--CCC-CCCC-eeEEEEEC--CCCCEEEEeC-------CC--ceeECCCCCcEEEeCCCC-----C-C
Confidence 8887 3210 00 000 2211 11233322 5788887653 23 444454433 65443210 0 1
Q ss_pred hccccCCccEEEE--eeCCEEEEEeecCCeEEEEECCCCceEEcC
Q 018005 304 SVCYHNYDHVYCF--WHQGMICVCCYTWPEILYYNVARRTWHWLP 346 (362)
Q Consensus 304 ~~~~~~~~~~~~~--~~~~~i~~~~~~~~~v~~yd~~~~~w~~~~ 346 (362)
. ...+.++ ..++.|++.. ...+..||+++++++...
T Consensus 584 ~-----~~~i~~i~~d~~g~lWi~t--~~Gl~~~~~~~~~~~~~~ 621 (795)
T 4a2l_A 584 P-----NNVVYGILEDSFGRLWLST--NRGISCFNPETEKFRNFT 621 (795)
T ss_dssp S-----CSCEEEEEECTTSCEEEEE--TTEEEEEETTTTEEEEEC
T ss_pred c-----hhheEEEEECCCCCEEEEc--CCceEEEcCCCCcEEEcC
Confidence 0 1123333 2346778865 467999999999887653
No 198
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=54.65 E-value=1.2e+02 Score=27.06 Aligned_cols=110 Identities=7% Similarity=-0.057 Sum_probs=53.0
Q ss_pred CCEEEEEecCCcEEEEEEcCCCeeec-CCCCCcccccCCCCcccccceeecccCC---CeEEEEEEeecCCccceEEEEE
Q 018005 206 KGSLYFTTPEPFSIVRFDLENGIWET-PNDANDHMTMMLPHELTFFRLVNDGEES---NKLYLIGGVGRNGISTTMKLWE 281 (362)
Q Consensus 206 ~G~ly~~~~~~~~i~~~D~~~~~w~~-~~~p~~~~~~~~p~~~~~~~lv~~~~~~---G~L~vv~~~~~~~~~~~i~vw~ 281 (362)
+|...+.+.....+..+|+.+..... .... +.. ........... -+ |++++.+. ...++.+|+
T Consensus 160 ~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~---~~~-h~~~v~~~~~s----p~~~~~~~l~s~~-----~d~~i~vwd 226 (450)
T 2vdu_B 160 DDTTVIIADKFGDVYSIDINSIPEEKFTQEP---ILG-HVSMLTDVHLI----KDSDGHQFIITSD-----RDEHIKISH 226 (450)
T ss_dssp TSSEEEEEETTSEEEEEETTSCCCSSCCCCC---SEE-CSSCEEEEEEE----ECTTSCEEEEEEE-----TTSCEEEEE
T ss_pred CCCEEEEEeCCCcEEEEecCCccccccccee---eec-ccCceEEEEEc----CCCCCCcEEEEEc-----CCCcEEEEE
Confidence 46555555555578888887654321 0000 000 11111112221 35 66776665 237899999
Q ss_pred ECCCCCEEEEecccHHHHHHhhhccccCCccEEE--EeeCCEEEEEeecCCeEEEEECCCCceE
Q 018005 282 LGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYC--FWHQGMICVCCYTWPEILYYNVARRTWH 343 (362)
Q Consensus 282 l~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~v~~yd~~~~~w~ 343 (362)
+.....=.... . +....+.+ +. ++..++.....+.|.+||+++++..
T Consensus 227 ~~~~~~~~~~~-~-------------~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~ 275 (450)
T 2vdu_B 227 YPQCFIVDKWL-F-------------GHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNL 275 (450)
T ss_dssp ESCTTCEEEEC-C-------------CCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEE
T ss_pred CCCCceeeeee-c-------------CCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEe
Confidence 85333211100 0 01111222 23 4434444556678999999987643
No 199
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=53.95 E-value=1.2e+02 Score=26.79 Aligned_cols=61 Identities=13% Similarity=0.247 Sum_probs=33.2
Q ss_pred CEEEEEecCCcEEEEEEcCCCeeecCCCCCcccccCCCCcccccceeecccCCCeEEEEEEeecCCccceEEEEEEC
Q 018005 207 GSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGISTTMKLWELG 283 (362)
Q Consensus 207 G~ly~~~~~~~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~L~vv~~~~~~~~~~~i~vw~l~ 283 (362)
|.+.+.++....+..||+.+..-...... ...... .+... -+|++++.++ ....+.+|++.
T Consensus 308 g~~l~sgs~D~~i~iwd~~~~~~~~~~~~-------h~~~v~--~v~~~--~~g~~l~s~s-----~D~~i~vwd~~ 368 (410)
T 1vyh_C 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVG-------HDNWVR--GVLFH--SGGKFILSCA-----DDKTLRVWDYK 368 (410)
T ss_dssp CCEEEEEETTSEEEEEETTTTEEEEEEEC-------CSSCEE--EEEEC--SSSSCEEEEE-----TTTEEEEECCT
T ss_pred CCEEEEEeCCCeEEEEECCCCceEEEEEC-------CCCcEE--EEEEc--CCCCEEEEEe-----CCCeEEEEECC
Confidence 55555566666899999987643221101 111111 22211 4677666655 23789999774
No 200
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=53.69 E-value=91 Score=25.55 Aligned_cols=134 Identities=8% Similarity=0.018 Sum_probs=62.9
Q ss_pred CCCeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCc-ccccccCCCCccccccC
Q 018005 119 SSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQS-WSKFDIDGFPSMILSQS 197 (362)
Q Consensus 119 ~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~-W~~~~~~~~p~~~~~~~ 197 (362)
.++.+.+||..+++....-... ......+.+.+.+ +.++.++ ....+.+|+..+.. .+... .+.. ..
T Consensus 37 ~dg~v~vw~~~~~~~~~~~~~~-~~~v~~~~~~~~~---~~l~~~~--~dg~i~~~~~~~~~~~~~~~--~~~~----~~ 104 (313)
T 3odt_A 37 RDGTVRLWSKDDQWLGTVVYTG-QGFLNSVCYDSEK---ELLLFGG--KDTMINGVPLFATSGEDPLY--TLIG----HQ 104 (313)
T ss_dssp TTSEEEEEEESSSEEEEEEEEC-SSCEEEEEEETTT---TEEEEEE--TTSCEEEEETTCCTTSCC-C--EECC----CS
T ss_pred cCCcEEEEECCCCEEEEEeecC-CccEEEEEECCCC---CEEEEec--CCCeEEEEEeeecCCCCccc--chhh----cc
Confidence 4678999999877644332211 1222344454432 2333333 23567778765421 11111 1110 01
Q ss_pred CCcccEEECCEEEEEecCCcEEEEEEcCCCeeecCCCCCcccccCCCCcccccceeecccCCCeEEEEEEeecCCccceE
Q 018005 198 SHQEGVFYKGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGISTTM 277 (362)
Q Consensus 198 ~~~~~v~~~G~ly~~~~~~~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~L~vv~~~~~~~~~~~i 277 (362)
.....+..+|...+.+.....+..||........ . . ............ .++.+++++. ....+
T Consensus 105 ~~i~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~-~-~-------~~~~v~~~~~~~---~~~~~l~~~~-----~d~~i 167 (313)
T 3odt_A 105 GNVCSLSFQDGVVISGSWDKTAKVWKEGSLVYNL-Q-A-------HNASVWDAKVVS---FSENKFLTAS-----ADKTI 167 (313)
T ss_dssp SCEEEEEEETTEEEEEETTSEEEEEETTEEEEEE-E-C-------CSSCEEEEEEEE---TTTTEEEEEE-----TTSCE
T ss_pred cCEEEEEecCCEEEEEeCCCCEEEEcCCcEEEec-c-c-------CCCceeEEEEcc---CCCCEEEEEE-----CCCCE
Confidence 1223344466666666666688899933322222 1 1 111111222221 3677777665 23678
Q ss_pred EEEE
Q 018005 278 KLWE 281 (362)
Q Consensus 278 ~vw~ 281 (362)
.+|+
T Consensus 168 ~i~d 171 (313)
T 3odt_A 168 KLWQ 171 (313)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 8896
No 201
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=53.68 E-value=1.4e+02 Score=27.57 Aligned_cols=136 Identities=13% Similarity=0.025 Sum_probs=70.3
Q ss_pred CCeEEEEeCCCCcccccccCCCCccccccCCCcccEEE--CCEEEEEecCCcEEEEEEcCCCeeecCCCCCcccccCCCC
Q 018005 168 PNYAFVYDSTDQSWSKFDIDGFPSMILSQSSHQEGVFY--KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPH 245 (362)
Q Consensus 168 ~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~~~~v~~--~G~ly~~~~~~~~i~~~D~~~~~w~~~~~p~~~~~~~~p~ 245 (362)
...+.+||..++.... . .... .......+.+ +|...+.+.....+..||+.+.+-.... . -..
T Consensus 466 d~~i~~~~~~~~~~~~-~--~~~~----~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~-~-------~~h 530 (615)
T 1pgu_A 466 GNTIQVFKLSDLEVSF-D--LKTP----LRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSR-W-------AFR 530 (615)
T ss_dssp TSCEEEEETTEEEEEE-E--CSSC----CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECC-S-------CCC
T ss_pred CCeEEEEECCCccccc-c--ccCC----ccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEe-e-------cCC
Confidence 4678999998765532 1 1111 0011223333 6777666666567999999876543311 1 001
Q ss_pred cccccceeecccC----------CCeEEEEEEeecCCccceEEEEEECCCCCEEEEecccHHHHHHhhhccccCCccEE-
Q 018005 246 ELTFFRLVNDGEE----------SNKLYLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVY- 314 (362)
Q Consensus 246 ~~~~~~lv~~~~~----------~G~L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~- 314 (362)
...-..+... - +|++++.+. ....+.+|+++....- +..+. .+...+.
T Consensus 531 ~~~v~~~~~s--p~~~~~~~~~~~~~~l~~~~-----~dg~i~iw~~~~~~~~--~~~~~------------~h~~~v~~ 589 (615)
T 1pgu_A 531 TSKINAISWK--PAEKGANEEEIEEDLVATGS-----LDTNIFIYSVKRPMKI--IKALN------------AHKDGVNN 589 (615)
T ss_dssp SSCEEEEEEC--CCC------CCSCCEEEEEE-----TTSCEEEEESSCTTCC--EEETT------------SSTTCEEE
T ss_pred CCceeEEEEc--CccccccccccCCCEEEEEc-----CCCcEEEEECCCCcee--chhhh------------cCccceEE
Confidence 1111122211 3 788877776 2368999998644331 11111 0111222
Q ss_pred -EEeeCCEEEEEeecCCeEEEEECCCC
Q 018005 315 -CFWHQGMICVCCYTWPEILYYNVARR 340 (362)
Q Consensus 315 -~~~~~~~i~~~~~~~~~v~~yd~~~~ 340 (362)
++..++. ++.....+.+.+||++++
T Consensus 590 l~~s~~~~-l~s~~~d~~v~iw~~~~~ 615 (615)
T 1pgu_A 590 LLWETPST-LVSSGADACIKRWNVVLE 615 (615)
T ss_dssp EEEEETTE-EEEEETTSCEEEEEEC--
T ss_pred EEEcCCCC-eEEecCCceEEEEeeecC
Confidence 2344555 555556678999998763
No 202
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=53.59 E-value=6.8 Score=34.73 Aligned_cols=29 Identities=17% Similarity=0.285 Sum_probs=18.5
Q ss_pred cEEECCEEEEEecCCcEEEEEEcCCC--eeec
Q 018005 202 GVFYKGSLYFTTPEPFSIVRFDLENG--IWET 231 (362)
Q Consensus 202 ~v~~~G~ly~~~~~~~~i~~~D~~~~--~w~~ 231 (362)
+++.+|.+|..+.++ .+.++|.+++ .|+.
T Consensus 5 P~v~~~~v~~gs~dg-~v~a~d~~tG~~~W~~ 35 (369)
T 2hz6_A 5 VTLPETLLFVSTLDG-SLHAVSKRTGSIKWTL 35 (369)
T ss_dssp ---CTTEEEEEETTS-EEEEEETTTCCEEEEE
T ss_pred CeeeCCEEEEEcCCC-EEEEEECCCCCEEEEe
Confidence 455677888765544 7999998754 6764
No 203
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=53.51 E-value=1.5e+02 Score=27.95 Aligned_cols=208 Identities=8% Similarity=-0.006 Sum_probs=96.4
Q ss_pred Cce-EEEecCCCCeEEEEeCC--c-CceeeccCCCC---CCccceEEEEeCCCceEEEEEeee-------cCCCeEEEEe
Q 018005 110 KGL-LCFSLPSSSSFLVCNLV--T-LSSRTIDFPTY---PFDFELLTLVSTPSGYKIFMLFAK-------SFPNYAFVYD 175 (362)
Q Consensus 110 ~Gl-l~~~~~~~~~~~v~NP~--t-~~w~~lP~~~~---~~~~~~~~~~~~~~~ykv~~~~~~-------~~~~~~~vy~ 175 (362)
+.. |.+.......+++++.. + ++...|...+. ......+++.+++. .|+..... .....+.+++
T Consensus 90 g~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~--~l~~~~~~~~~~~~~~~~~~i~~~~ 167 (662)
T 3azo_A 90 GGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERG--EVWCMAEEFTGEGPSDVRRFLAAVP 167 (662)
T ss_dssp SSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTT--EEEEEEEEECSSSTTCEEEEEEEEE
T ss_pred CCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCC--EEEEEEecccCCCCCCceeEEEEEE
Confidence 335 66555445678899987 4 77666655321 11222344554433 34333332 1124788888
Q ss_pred CCC------Ccccccc-cCCCCccccccCCCcccEE-ECCE-EEEEecCC-------cEEEEEEcC-CC---eeecCCCC
Q 018005 176 STD------QSWSKFD-IDGFPSMILSQSSHQEGVF-YKGS-LYFTTPEP-------FSIVRFDLE-NG---IWETPNDA 235 (362)
Q Consensus 176 s~~------~~W~~~~-~~~~p~~~~~~~~~~~~v~-~~G~-ly~~~~~~-------~~i~~~D~~-~~---~w~~~~~p 235 (362)
..+ +.-+... . .. . ......+ -+|+ |++..... ..|..+|++ +. ....+. .
T Consensus 168 ~~~~~~~~~~~~~~l~~~-~~-~------~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~-~ 238 (662)
T 3azo_A 168 LDGSAAADRSAVRELSDD-AH-R------FVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLL-G 238 (662)
T ss_dssp TTSTTTTCGGGSEESSCS-CS-S------EECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEE-E
T ss_pred CCCCccccCCceeEEEec-CC-C------cccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeC-C
Confidence 877 4443322 1 00 0 0111112 2564 55554322 478999998 55 333321 0
Q ss_pred CcccccCCCCcccccceeecccCCCeEEEEEEeecCCccceEEEEEECC-CCCEEEEecccHHHHHHhhhccccCCccEE
Q 018005 236 NDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGISTTMKLWELGC-GGNWIEVERVPEMMCRKFMSVCYHNYDHVY 314 (362)
Q Consensus 236 ~~~~~~~~p~~~~~~~lv~~~~~~G~L~vv~~~~~~~~~~~i~vw~l~~-~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~ 314 (362)
-.. .....+... -+|+|+++... .....+|.++. +++++.+....... ....+.......
T Consensus 239 -------~~~-~~~~~~~~s--pdg~l~~~~~~-----~~~~~l~~~~~~~~~~~~l~~~~~~~----~~p~w~~~~~~~ 299 (662)
T 3azo_A 239 -------GPE-EAIAQAEWA--PDGSLIVATDR-----TGWWNLHRVDPATGAATQLCRREEEF----AGPLWTPGMRWF 299 (662)
T ss_dssp -------ETT-BCEEEEEEC--TTSCEEEEECT-----TSSCEEEEECTTTCCEEESSCCSSBS----SCCCCSTTCCSE
T ss_pred -------CCC-ceEcceEEC--CCCeEEEEECC-----CCCeEEEEEECCCCceeecccccccc----cCccccccCceE
Confidence 001 111122211 58887665531 13446777765 34577654321110 000000001112
Q ss_pred EEeeCCEEEEEeec-CCeEEEEECCCCceEEcCC
Q 018005 315 CFWHQGMICVCCYT-WPEILYYNVARRTWHWLPS 347 (362)
Q Consensus 315 ~~~~~~~i~~~~~~-~~~v~~yd~~~~~w~~~~~ 347 (362)
.+..++.+++.... ...+..+|+++++.+.+..
T Consensus 300 ~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~ 333 (662)
T 3azo_A 300 APLANGLIAVVHGKGAAVLGILDPESGELVDAAG 333 (662)
T ss_dssp EECTTSCEEEEEBSSSCEEEEEETTTTEEEECCS
T ss_pred eEeCCCEEEEEEEcCccEEEEEECCCCcEEEecC
Confidence 23334445554333 2356777988888777743
No 204
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=52.04 E-value=1.1e+02 Score=26.14 Aligned_cols=99 Identities=8% Similarity=-0.050 Sum_probs=52.8
Q ss_pred CeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCceEEEEEeeecCCC--eEEEEeCCCCcccccccCCCCccccccCC
Q 018005 121 SSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPN--YAFVYDSTDQSWSKFDIDGFPSMILSQSS 198 (362)
Q Consensus 121 ~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~--~~~vy~s~~~~W~~~~~~~~p~~~~~~~~ 198 (362)
..++++|..+++...+...........+.+.+.+. .++......... .++++|..++.-+... ..+. .
T Consensus 216 ~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~--~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~--~~~~------~ 285 (396)
T 3c5m_A 216 ARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGS--AMAYVSYFKGQTDRVIYKANPETLENEEVM--VMPP------C 285 (396)
T ss_dssp CCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSS--CEEEEEEETTTCCEEEEEECTTTCCEEEEE--ECCS------E
T ss_pred ceEEEEECCCCceeEeeccCCCccccceEECCCCC--EEEEEecCCCCccceEEEEECCCCCeEEee--eCCC------C
Confidence 47899999888877765411111122334443332 233333332333 4899999887665544 2221 1
Q ss_pred CcccEEE--CCEEEEEec----------------CCcEEEEEEcCCCeeec
Q 018005 199 HQEGVFY--KGSLYFTTP----------------EPFSIVRFDLENGIWET 231 (362)
Q Consensus 199 ~~~~v~~--~G~ly~~~~----------------~~~~i~~~D~~~~~w~~ 231 (362)
. ..+. +|++++... ....+..+|+.+.+...
T Consensus 286 -~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~ 334 (396)
T 3c5m_A 286 -S-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQK 334 (396)
T ss_dssp -E-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCE
T ss_pred -C-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEE
Confidence 1 2222 677665432 12468889988766543
No 205
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=51.47 E-value=1.2e+02 Score=26.09 Aligned_cols=139 Identities=14% Similarity=0.082 Sum_probs=68.6
Q ss_pred CCCeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCcccccccCCCCccccccCC
Q 018005 119 SSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILSQSS 198 (362)
Q Consensus 119 ~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~ 198 (362)
.++.+.+||..+++....-.. .......+.+...... ..++.++ ....+.+||..++.-...-. ... .
T Consensus 174 ~D~~v~lwd~~~~~~~~~~~~-h~~~v~~~~~~~~~~g-~~l~sgs--~Dg~v~~wd~~~~~~~~~~~-~h~-------~ 241 (354)
T 2pbi_B 174 GDGTCALWDVESGQLLQSFHG-HGADVLCLDLAPSETG-NTFVSGG--CDKKAMVWDMRSGQCVQAFE-THE-------S 241 (354)
T ss_dssp TTSEEEEEETTTCCEEEEEEC-CSSCEEEEEECCCSSC-CEEEEEE--TTSCEEEEETTTCCEEEEEC-CCS-------S
T ss_pred CCCcEEEEeCCCCeEEEEEcC-CCCCeEEEEEEeCCCC-CEEEEEe--CCCeEEEEECCCCcEEEEec-CCC-------C
Confidence 357899999988875322111 1111223333332222 2333333 34588999988765322110 100 1
Q ss_pred CcccEEE--CCEEEEEecCCcEEEEEEcCCCeeecCCCCCcccccCCCCcccccceeecccCCCeEEEEEEeecCCccce
Q 018005 199 HQEGVFY--KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGISTT 276 (362)
Q Consensus 199 ~~~~v~~--~G~ly~~~~~~~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~L~vv~~~~~~~~~~~ 276 (362)
.-..+.+ +|...+.++...++..||+.+..-...... .........+... .+|++.+++. ...+
T Consensus 242 ~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~-------~~~~~~~~~~~~s--~~g~~l~~g~-----~d~~ 307 (354)
T 2pbi_B 242 DVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSK-------ESIIFGASSVDFS--LSGRLLFAGY-----NDYT 307 (354)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC-------TTCCSCEEEEEEC--TTSSEEEEEE-----TTSC
T ss_pred CeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcC-------CCcccceeEEEEe--CCCCEEEEEE-----CCCc
Confidence 1123333 466666666656799999987643221101 0000111122211 5788777766 2368
Q ss_pred EEEEEEC
Q 018005 277 MKLWELG 283 (362)
Q Consensus 277 i~vw~l~ 283 (362)
+.+|++.
T Consensus 308 i~vwd~~ 314 (354)
T 2pbi_B 308 INVWDVL 314 (354)
T ss_dssp EEEEETT
T ss_pred EEEEECC
Confidence 9999874
No 206
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=51.44 E-value=1.1e+02 Score=25.90 Aligned_cols=194 Identities=12% Similarity=0.016 Sum_probs=93.2
Q ss_pred CCceEEEecCCCCeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCcccccccCC
Q 018005 109 SKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDG 188 (362)
Q Consensus 109 ~~Gll~~~~~~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~~~~ 188 (362)
.+|.+++.....+.++++|+.+++...+... ....+++++..+ ++++.. ...+.+||..+++.+... .
T Consensus 59 ~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~---~~v~~i~~~~dg---~l~v~~----~~gl~~~d~~~g~~~~~~--~ 126 (326)
T 2ghs_A 59 ASGTAWWFNILERELHELHLASGRKTVHALP---FMGSALAKISDS---KQLIAS----DDGLFLRDTATGVLTLHA--E 126 (326)
T ss_dssp TTTEEEEEEGGGTEEEEEETTTTEEEEEECS---SCEEEEEEEETT---EEEEEE----TTEEEEEETTTCCEEEEE--C
T ss_pred CCCEEEEEECCCCEEEEEECCCCcEEEEECC---CcceEEEEeCCC---eEEEEE----CCCEEEEECCCCcEEEEe--e
Confidence 3454444443356899999999886655422 123344454432 333322 235889999888876554 2
Q ss_pred CCccccccCCCcccEEE--CCEEEEEecC------CcEEEEEEcCCCeeecCCCCCcccccCCCCcccccceeecccCCC
Q 018005 189 FPSMILSQSSHQEGVFY--KGSLYFTTPE------PFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESN 260 (362)
Q Consensus 189 ~p~~~~~~~~~~~~v~~--~G~ly~~~~~------~~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G 260 (362)
.+. .... .....+.+ +|.+|+.+.. ...|..+| +.+...+... .. ....+... -+|
T Consensus 127 ~~~-~~~~-~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~-------~~---~~~~i~~s--~dg 190 (326)
T 2ghs_A 127 LES-DLPG-NRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFAD-------IS---IPNSICFS--PDG 190 (326)
T ss_dssp SST-TCTT-EEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEE-------ES---SEEEEEEC--TTS
T ss_pred CCC-CCCC-CCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCC-------Cc---ccCCeEEc--CCC
Confidence 211 0100 01122333 6887765431 24688888 4555432100 00 11123211 466
Q ss_pred e-EEEEEEeecCCccceEEEEEEC-CCC-CE---EEEecccHHHHHHhhhccccCCccEEEEeeCCEEEEEeecCCeEEE
Q 018005 261 K-LYLIGGVGRNGISTTMKLWELG-CGG-NW---IEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYTWPEILY 334 (362)
Q Consensus 261 ~-L~vv~~~~~~~~~~~i~vw~l~-~~~-~W---~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~v~~ 334 (362)
+ ||+... ....+.+|.++ ..+ .. ..+..++. . .....-.++..++.+++.....+.|..
T Consensus 191 ~~lyv~~~-----~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~-----~-----~~~p~gi~~d~~G~lwva~~~~~~v~~ 255 (326)
T 2ghs_A 191 TTGYFVDT-----KVNRLMRVPLDARTGLPTGKAEVFIDSTG-----I-----KGGMDGSVCDAEGHIWNARWGEGAVDR 255 (326)
T ss_dssp CEEEEEET-----TTCEEEEEEBCTTTCCBSSCCEEEEECTT-----S-----SSEEEEEEECTTSCEEEEEETTTEEEE
T ss_pred CEEEEEEC-----CCCEEEEEEcccccCCcccCceEEEECCC-----C-----CCCCCeeEECCCCCEEEEEeCCCEEEE
Confidence 5 666543 23567777664 223 21 11111210 0 000111222334567777655668999
Q ss_pred EECCCCceEEc
Q 018005 335 YNVARRTWHWL 345 (362)
Q Consensus 335 yd~~~~~w~~~ 345 (362)
||++.+....+
T Consensus 256 ~d~~g~~~~~i 266 (326)
T 2ghs_A 256 YDTDGNHIARY 266 (326)
T ss_dssp ECTTCCEEEEE
T ss_pred ECCCCCEEEEE
Confidence 99865544444
No 207
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=50.23 E-value=1.3e+02 Score=26.17 Aligned_cols=104 Identities=12% Similarity=0.007 Sum_probs=53.0
Q ss_pred CCEEEEEecCCcEEEEEEcCCCeeec-CCCCCcccccCCCCcccccceeecccCCCe-EEEEEEeecCCccceEEEEEEC
Q 018005 206 KGSLYFTTPEPFSIVRFDLENGIWET-PNDANDHMTMMLPHELTFFRLVNDGEESNK-LYLIGGVGRNGISTTMKLWELG 283 (362)
Q Consensus 206 ~G~ly~~~~~~~~i~~~D~~~~~w~~-~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~-L~vv~~~~~~~~~~~i~vw~l~ 283 (362)
+|...+.+.....+..||+.+.+-.. +... ..... ..+... -+|+ +++.+. ....+.+|++.
T Consensus 258 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-------~~~~v--~~~~~~--~~~~~~l~~g~-----~dg~i~vwd~~ 321 (420)
T 3vl1_A 258 YGKYVIAGHVSGVITVHNVFSKEQTIQLPSK-------FTCSC--NSLTVD--GNNANYIYAGY-----ENGMLAQWDLR 321 (420)
T ss_dssp TTEEEEEEETTSCEEEEETTTCCEEEEECCT-------TSSCE--EEEEEC--SSCTTEEEEEE-----TTSEEEEEETT
T ss_pred CCCEEEEEcCCCeEEEEECCCCceeEEcccc-------cCCCc--eeEEEe--CCCCCEEEEEe-----CCCeEEEEEcC
Confidence 56666666655679999998754322 1111 11111 122211 4566 666655 23789999886
Q ss_pred CCCC-EEEEecccHHHHHHhhhccccCCccEEE-EeeCCEEEEEeecCCeEEEEECCC
Q 018005 284 CGGN-WIEVERVPEMMCRKFMSVCYHNYDHVYC-FWHQGMICVCCYTWPEILYYNVAR 339 (362)
Q Consensus 284 ~~~~-W~~v~~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~v~~yd~~~ 339 (362)
.... -..+..- ....+.+ ...++..++.....+.+.+||+.+
T Consensus 322 ~~~~~~~~~~~~--------------~~~~v~~~~~~~~~~l~s~~~d~~v~iw~~~~ 365 (420)
T 3vl1_A 322 SPECPVGEFLIN--------------EGTPINNVYFAAGALFVSSGFDTSIKLDIISD 365 (420)
T ss_dssp CTTSCSEEEEES--------------TTSCEEEEEEETTEEEEEETTTEEEEEEEECC
T ss_pred CCcCchhhhhcc--------------CCCCceEEEeCCCCEEEEecCCccEEEEeccC
Confidence 4432 1111110 1111222 233455555555556788999876
No 208
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=49.07 E-value=1.4e+02 Score=26.39 Aligned_cols=184 Identities=11% Similarity=0.008 Sum_probs=89.3
Q ss_pred CeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCc----ccccccCCCCcccccc
Q 018005 121 SSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQS----WSKFDIDGFPSMILSQ 196 (362)
Q Consensus 121 ~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~----W~~~~~~~~p~~~~~~ 196 (362)
..+...++.+++...+-+. .....+++++.. .-+|++... ....+..++..... ..... . . .
T Consensus 92 ~~I~~i~l~~~~~~~~~~~--~~~~~~l~~d~~--~~~lywsD~--~~~~I~~~~~~g~~~~~~~~~~~--~--~----~ 157 (400)
T 3p5b_L 92 HEVRKMTLDRSEYTSLIPN--LRNVVALDTEVA--SNRIYWSDL--SQRMICSTQLDRAHGVSSYDTVI--S--R----D 157 (400)
T ss_dssp TEEEEECTTSCSCEEEECS--CSCEEEEEEETT--TTEEEEEET--TTTEEEEEEC------CCCEEEE--C--S----S
T ss_pred ceeEEEccCCcceeEeccc--cCcceEEeeeec--cCceEEEec--CCCeEEEEEcccCCCCCcceEEE--e--C----C
Confidence 5666777776665544221 112234444422 236666543 23467777775421 11111 0 0 0
Q ss_pred CCCcccEEE---CCEEEEEecCCcEEEEEEcCCCeeecCCCCCcccccCCCCcccccceeecccCCCeEEEEEEeecCCc
Q 018005 197 SSHQEGVFY---KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGI 273 (362)
Q Consensus 197 ~~~~~~v~~---~G~ly~~~~~~~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~L~vv~~~~~~~~ 273 (362)
.....++.+ +|.|||.......|.++|++...-..+.... ...|. .+++. -.+|.||+... +.
T Consensus 158 ~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~----~~~P~-----~iavd-p~~g~ly~td~----~~ 223 (400)
T 3p5b_L 158 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREN----GSKPR-----AIVVD-PVHGFMYWTDW----GT 223 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECS----SCCEE-----EEEEE-TTTTEEEEEEC----SS
T ss_pred CCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCC----CCCcc-----eEEEe-cccCeEEEEeC----CC
Confidence 112334444 6899999877778999999865443321110 00122 23321 14788998864 11
Q ss_pred cceEEEEEECCCCCEEEEecccHHHHHHhhhccccCCccEEEEe-eCCEEEEEeecCCeEEEEECCCCceEEc
Q 018005 274 STTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCFW-HQGMICVCCYTWPEILYYNVARRTWHWL 345 (362)
Q Consensus 274 ~~~i~vw~l~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~v~~yd~~~~~w~~~ 345 (362)
...|++..++....=..+.. .+ ....-.++. .++.||+.......|.++|++...-+.+
T Consensus 224 ~~~I~~~~~dG~~~~~~~~~-------~l------~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~ 283 (400)
T 3p5b_L 224 PAKIKKGGLNGVDIYSLVTE-------NI------QWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTI 283 (400)
T ss_dssp SCCEEEEETTSCSCEEEECS-------SC------SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEE
T ss_pred CCEEEEEeCCCCccEEEEEC-------CC------CceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEE
Confidence 24455554432221222211 00 011111222 4678898876677899999876544443
No 209
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=48.98 E-value=60 Score=30.71 Aligned_cols=79 Identities=13% Similarity=0.138 Sum_probs=46.5
Q ss_pred CeEEEEeCCCCc--ccccccCCCCccccccCCCcccEEECCEEEEEecCCcEEEEEEcCCC--eeecCCCCCcccccCCC
Q 018005 169 NYAFVYDSTDQS--WSKFDIDGFPSMILSQSSHQEGVFYKGSLYFTTPEPFSIVRFDLENG--IWETPNDANDHMTMMLP 244 (362)
Q Consensus 169 ~~~~vy~s~~~~--W~~~~~~~~p~~~~~~~~~~~~v~~~G~ly~~~~~~~~i~~~D~~~~--~w~~~~~p~~~~~~~~p 244 (362)
..+..+|..+++ |+... ..+. .....+..+|.+|. +.....+.+||.++. .|+. . +|
T Consensus 466 G~l~A~D~~tG~~~W~~~~--~~~~------~~g~~~tagglvf~-g~~dg~l~A~D~~tG~~lW~~-~---------~~ 526 (582)
T 1flg_A 466 GSLRAMDPVSGKVVWEHKE--HLPL------WAGVLATAGNLVFT-GTGDGYFKAFDAKSGKELWKF-Q---------TG 526 (582)
T ss_dssp EEEEEECTTTCCEEEEEEE--SSCC------CSCCEEETTTEEEE-ECTTSEEEEEETTTCCEEEEE-E---------CS
T ss_pred ceEEEEECCCCCEEEEecC--CCCC------cccceEeCCCEEEE-ECCCCcEEEEECCCCCEEEEe-c---------CC
Confidence 367788887764 88755 3221 12223344677776 444458999999865 5765 2 33
Q ss_pred CcccccceeecccCCCeEEEEEEe
Q 018005 245 HELTFFRLVNDGEESNKLYLIGGV 268 (362)
Q Consensus 245 ~~~~~~~lv~~~~~~G~L~vv~~~ 268 (362)
.+.....++-+ .+|++||+...
T Consensus 527 ~g~~a~P~~y~--~~G~qYv~~~~ 548 (582)
T 1flg_A 527 SGIVSPPITWE--QDGEQYLGVTV 548 (582)
T ss_dssp SCCCSCCEEEE--ETTEEEEEEEE
T ss_pred CCcccCceEEE--ECCEEEEEEEc
Confidence 33333333323 69999988653
No 210
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=48.90 E-value=1.9e+02 Score=27.91 Aligned_cols=107 Identities=10% Similarity=0.060 Sum_probs=57.0
Q ss_pred CCceEEEecCCCCeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCcccccccCC
Q 018005 109 SKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDG 188 (362)
Q Consensus 109 ~~Gll~~~~~~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~~~~ 188 (362)
.+|.||+.....+.+.++++..+....+-..... .-.++++++.. -.+++... .....+++++.....-+... .
T Consensus 463 ~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~-~P~giavDp~~--g~ly~td~-~~~~~I~~~~~dG~~~~~l~--~ 536 (699)
T 1n7d_A 463 IHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGS-KPRAIVVDPVH--GFMYWTDW-GTPAKIKKGGLNGVDIYSLV--T 536 (699)
T ss_dssp SSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSC-CCCCEECCSSS--SCCEECCC-SSSCCEEBCCSSSCCCCEES--C
T ss_pred eCCcEEEEeccCCeEEEEecCCCceEEEEeCCCC-CcceEEEccCC--CcEEEccc-CCCCeEEEEeCCCCCeeEEE--e
Confidence 4666777655567889999887765544322111 11233443221 13343221 11246666665433222221 0
Q ss_pred CCccccccCCCcccEEE---CCEEEEEecCCcEEEEEEcCCC
Q 018005 189 FPSMILSQSSHQEGVFY---KGSLYFTTPEPFSIVRFDLENG 227 (362)
Q Consensus 189 ~p~~~~~~~~~~~~v~~---~G~ly~~~~~~~~i~~~D~~~~ 227 (362)
. .+ ....++.+ +|.|||.......|.++|+...
T Consensus 537 --~-~l---~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~ 572 (699)
T 1n7d_A 537 --E-NI---QWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 572 (699)
T ss_dssp --S-SC---SSCCCEEECTTTCCEEEEETTTTEEEEECSSSS
T ss_pred --C-CC---CCccEEEEeccCCEEEEEecCCCeEEEEccCCC
Confidence 0 01 23456666 4899999887778999999753
No 211
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=48.53 E-value=1.2e+02 Score=25.59 Aligned_cols=182 Identities=12% Similarity=0.025 Sum_probs=88.7
Q ss_pred CeEEEEeCCcCceeec-cCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCC---cc-cccccCCCCccccc
Q 018005 121 SSFLVCNLVTLSSRTI-DFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQ---SW-SKFDIDGFPSMILS 195 (362)
Q Consensus 121 ~~~~v~NP~t~~w~~l-P~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~---~W-~~~~~~~~p~~~~~ 195 (362)
..+...++.+++...+ +.. ....++.++.. .-++++... ....+..++..+. .- +..- +. .+
T Consensus 10 ~~I~~i~~~~~~~~~~~~~~---~~p~g~~~d~~--~~~ly~~D~--~~~~I~~~~~~g~~~~~~~~~~~----~~-~~- 76 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLIPNL---RNVVALDTEVA--SNRIYWSDL--SQRMICSTQLDRAHGVSSYDTVI----SR-DI- 76 (316)
T ss_dssp SSEEEEETTSCCCEEEECSC---SSEEEEEEETT--TTEEEEEET--TTTEEEEEEC--------CEEEE----CS-SC-
T ss_pred CeEEEEECCCcceEehhcCC---CceEEEEEEeC--CCEEEEEEC--CCCcEEEEECCCCCCCcccEEEE----eC-CC-
Confidence 4566777777765443 222 12234444432 225666543 3457888887651 11 1111 00 01
Q ss_pred cCCCcccEEE---CCEEEEEecCCcEEEEEEcCCCeeecCCCCCcccccCCCCcccccceeecccCCCeEEEEEEeecCC
Q 018005 196 QSSHQEGVFY---KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNG 272 (362)
Q Consensus 196 ~~~~~~~v~~---~G~ly~~~~~~~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~L~vv~~~~~~~ 272 (362)
....++.+ +|.+||.......|.++|++...-..+.... ...|. .+++. -.+|.||+... .
T Consensus 77 --~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~----~~~P~-----~iavd-p~~g~ly~~d~----~ 140 (316)
T 1ijq_A 77 --QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREN----GSKPR-----AIVVD-PVHGFMYWTDW----G 140 (316)
T ss_dssp --SCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECT----TCCEE-----EEEEE-TTTTEEEEEEC----S
T ss_pred --CCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECC----CCCcc-----eEEeC-CCCCEEEEEcc----C
Confidence 12334444 5899999877778999998764333221010 00222 23321 03788888764 1
Q ss_pred ccceEEEEEECCCCC-EEEEecccHHHHHHhhhccccCCccEEEEe-eCCEEEEEeecCCeEEEEECCCCceEEc
Q 018005 273 ISTTMKLWELGCGGN-WIEVERVPEMMCRKFMSVCYHNYDHVYCFW-HQGMICVCCYTWPEILYYNVARRTWHWL 345 (362)
Q Consensus 273 ~~~~i~vw~l~~~~~-W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~v~~yd~~~~~w~~~ 345 (362)
....|. +++.+++ =+.+..- .+ ....-.++. .++.||+.....+.|.++|++...-+.+
T Consensus 141 ~~~~I~--~~~~dG~~~~~~~~~------~~------~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~ 201 (316)
T 1ijq_A 141 TPAKIK--KGGLNGVDIYSLVTE------NI------QWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTI 201 (316)
T ss_dssp SSCEEE--EEETTSCCEEEEECS------SC------SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred CCCeEE--EEcCCCCCeEEEEEC------CC------CCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEE
Confidence 113444 4444444 2222111 00 011111222 4678999887777899999886544443
No 212
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=47.34 E-value=1.2e+02 Score=25.19 Aligned_cols=193 Identities=11% Similarity=0.060 Sum_probs=90.9
Q ss_pred EEEecCCCCeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCcccccccCCCCcc
Q 018005 113 LCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSM 192 (362)
Q Consensus 113 l~~~~~~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~ 192 (362)
|++.....+.+..+++ +++...+.... ....+++++..+ ++++... ....+.+|+.. ++.+... ....
T Consensus 59 l~~~d~~~~~i~~~~~-~g~~~~~~~~~--~~~~gl~~d~dG---~l~v~~~--~~~~v~~~~~~-g~~~~~~--~~~~- 126 (305)
T 3dr2_A 59 LVWSDLVGRRVLGWRE-DGTVDVLLDAT--AFTNGNAVDAQQ---RLVHCEH--GRRAITRSDAD-GQAHLLV--GRYA- 126 (305)
T ss_dssp EEEEETTTTEEEEEET-TSCEEEEEESC--SCEEEEEECTTS---CEEEEET--TTTEEEEECTT-SCEEEEE--CEET-
T ss_pred EEEEECCCCEEEEEeC-CCCEEEEeCCC--CccceeeECCCC---CEEEEEC--CCCEEEEECCC-CCEEEEE--eccC-
Confidence 4444444578888898 66654443221 112234444332 3444321 23478888875 5554443 1111
Q ss_pred ccccCCCcccEEE--CCEEEEEe----c-------------CCcEEEEEEcCCCeeecCCCCCcccccCCCCccccccee
Q 018005 193 ILSQSSHQEGVFY--KGSLYFTT----P-------------EPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLV 253 (362)
Q Consensus 193 ~~~~~~~~~~v~~--~G~ly~~~----~-------------~~~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~~~lv 253 (362)
.... .....+.+ +|.+|+.. . ....|..||++++++..+. .. ..|. .+.
T Consensus 127 ~~~~-~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~-----~~p~-----gl~ 194 (305)
T 3dr2_A 127 GKRL-NSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DL-----DHPN-----GLA 194 (305)
T ss_dssp TEEC-SCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EE-----SSEE-----EEE
T ss_pred CCcc-CCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cC-----CCCc-----ceE
Confidence 0101 11222333 68888852 1 1246899999877666542 20 0222 222
Q ss_pred ecccCCCe-EEEEEEeecCCccceEEEEEECCCCCEEE---EecccHHHHHHhhhccccCCccEEEEeeCCEEEEEeecC
Q 018005 254 NDGEESNK-LYLIGGVGRNGISTTMKLWELGCGGNWIE---VERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYTW 329 (362)
Q Consensus 254 ~~~~~~G~-L~vv~~~~~~~~~~~i~vw~l~~~~~W~~---v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 329 (362)
.. -+|+ ||+............+.+|.++..+ ... ....+ .....-.++..++.|++.. .
T Consensus 195 ~s--pdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~~~------------~~~pdgi~~d~~G~lwv~~--~ 257 (305)
T 3dr2_A 195 FS--PDEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFASVP------------DGLPDGFCVDRGGWLWSSS--G 257 (305)
T ss_dssp EC--TTSSEEEEEECCC---CCCEEEEEEEETTE-EEEEEEEECCS------------SSCCCSEEECTTSCEEECC--S
T ss_pred Ec--CCCCEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEECC------------CCCCCeEEECCCCCEEEec--C
Confidence 11 4666 6666542100112567777775332 211 11110 0001112233344577765 4
Q ss_pred CeEEEEECCCCceEEcC
Q 018005 330 PEILYYNVARRTWHWLP 346 (362)
Q Consensus 330 ~~v~~yd~~~~~w~~~~ 346 (362)
+.|.+||++.+....+.
T Consensus 258 ~gv~~~~~~g~~~~~~~ 274 (305)
T 3dr2_A 258 TGVCVFDSDGQLLGHIP 274 (305)
T ss_dssp SEEEEECTTSCEEEEEE
T ss_pred CcEEEECCCCCEEEEEE
Confidence 56999999777666653
No 213
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=47.05 E-value=1.4e+02 Score=25.64 Aligned_cols=118 Identities=11% Similarity=0.055 Sum_probs=56.4
Q ss_pred EecCCceEEEecCCCCeEEEEeCCcCceeec-cCC-CC---CCccceEEEEeCCCceEEEEEeeec-CCCeEEEEeCCCC
Q 018005 106 LSSSKGLLCFSLPSSSSFLVCNLVTLSSRTI-DFP-TY---PFDFELLTLVSTPSGYKIFMLFAKS-FPNYAFVYDSTDQ 179 (362)
Q Consensus 106 ~~s~~Gll~~~~~~~~~~~v~NP~t~~w~~l-P~~-~~---~~~~~~~~~~~~~~~ykv~~~~~~~-~~~~~~vy~s~~~ 179 (362)
..+.+| +++.+..++.+.+||..+++.... ... .. ......+.+.+.+ +.++.++.. ....+.+||..++
T Consensus 193 ~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~---~~l~~~~~d~~~g~i~i~d~~~~ 268 (397)
T 1sq9_A 193 DISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQG---SLLAIAHDSNSFGCITLYETEFG 268 (397)
T ss_dssp EECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSST---TEEEEEEEETTEEEEEEEETTTC
T ss_pred EECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCC---CEEEEEecCCCCceEEEEECCCC
Confidence 344456 555555568899999988774332 220 01 2222344444332 233333321 1147889998765
Q ss_pred cccccccCCCCc---cc----cccCCCcccEEE--CCEEEEEecCCcEEEEEEcCCCee
Q 018005 180 SWSKFDIDGFPS---MI----LSQSSHQEGVFY--KGSLYFTTPEPFSIVRFDLENGIW 229 (362)
Q Consensus 180 ~W~~~~~~~~p~---~~----~~~~~~~~~v~~--~G~ly~~~~~~~~i~~~D~~~~~w 229 (362)
.=...- ..+. .. .........+.+ +|...+.++....|.+||+.+.+-
T Consensus 269 ~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 325 (397)
T 1sq9_A 269 ERIGSL--SVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKER 325 (397)
T ss_dssp CEEEEE--CBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEE
T ss_pred ccccee--ccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCce
Confidence 321110 0000 00 000011122333 466666666556899999987643
No 214
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=46.53 E-value=1.4e+02 Score=25.72 Aligned_cols=181 Identities=8% Similarity=-0.068 Sum_probs=90.3
Q ss_pred CeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCcccccccCCCCccccccCCCc
Q 018005 121 SSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILSQSSHQ 200 (362)
Q Consensus 121 ~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~~ 200 (362)
..+...++...+...+.... ....+++++.. .-+++.... ....+..++..+..-+... .. .+ ...
T Consensus 53 ~~I~~i~~~g~~~~~~~~~~--~~~~~l~~d~~--~~~ly~~D~--~~~~I~r~~~~g~~~~~~~--~~---~~---~~p 118 (349)
T 3v64_C 53 IDIRQVLPHRSEYTLLLNNL--ENAIALDFHHR--RELVFWSDV--TLDRILRANLNGSNVEEVV--ST---GL---ESP 118 (349)
T ss_dssp SCEEEECTTSCCEEEEECSC--SCEEEEEEETT--TTEEEEEET--TTTEEEEEETTSCSCEEEE--CS---SC---SCC
T ss_pred cceEEEeCCCCeeEEeecCC--CceEEEEEecc--ccEEEEEec--cCCceEEEecCCCCceEEE--eC---CC---CCc
Confidence 34566666665554432211 11234444422 236666543 3457888888765433322 00 01 123
Q ss_pred ccEEE---CCEEEEEecCCcEEEEEEcCCCeeecCCCCCcccccCCCCcccccceeecccCCCeEEEEEEeecCCccceE
Q 018005 201 EGVFY---KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGISTTM 277 (362)
Q Consensus 201 ~~v~~---~G~ly~~~~~~~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~L~vv~~~~~~~~~~~i 277 (362)
.++.+ +|.+||.......|.++|++...-..+.... + ..| ..+++. -.+|.||+.... ....|
T Consensus 119 ~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~--l--~~P-----~~iavd-p~~g~ly~td~~----~~~~I 184 (349)
T 3v64_C 119 GGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQS--L--EKP-----RAIALH-PMEGTIYWTDWG----NTPRI 184 (349)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTT--C--SCE-----EEEEEE-TTTTEEEEEECS----SSCEE
T ss_pred cEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCC--C--CCc-----ceEEEe-cCcCeEEEeccC----CCCEE
Confidence 34444 5899999877778999998765332221010 0 012 223321 137888888641 12445
Q ss_pred EEEEECCCCC-EEEEecccHHHHHHhhhccccCCccEEEEe-eCCEEEEEeecCCeEEEEECCCCceE
Q 018005 278 KLWELGCGGN-WIEVERVPEMMCRKFMSVCYHNYDHVYCFW-HQGMICVCCYTWPEILYYNVARRTWH 343 (362)
Q Consensus 278 ~vw~l~~~~~-W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~v~~yd~~~~~w~ 343 (362)
.+..+ +++ -+.+..- .+ ....-.++. .++.||+.....+.|..+|++...-+
T Consensus 185 ~r~~~--dG~~~~~~~~~------~~------~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~ 238 (349)
T 3v64_C 185 EASSM--DGSGRRIIADT------HL------FWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRK 238 (349)
T ss_dssp EEEET--TSCSCEESCCS------SC------SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred EEEeC--CCCCcEEEEEC------CC------CCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceE
Confidence 54444 443 1111100 00 011112233 46789998877778999998765433
No 215
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=45.99 E-value=70 Score=26.79 Aligned_cols=110 Identities=7% Similarity=-0.069 Sum_probs=56.2
Q ss_pred EEEEEecCCcEEEEEEcCCCeeecCCCCCcccccCCCCcccccceeecccCCCeEEEEEEeecCCccceEEEEEECCCCC
Q 018005 208 SLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGISTTMKLWELGCGGN 287 (362)
Q Consensus 208 ~ly~~~~~~~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~L~vv~~~~~~~~~~~i~vw~l~~~~~ 287 (362)
.+||.+.....|..||+. ++.+.+. .+... ...+... .+|+|++... ....+.+| +.+++
T Consensus 58 ~l~~~d~~~~~i~~~~~~-g~~~~~~---------~~~~~-~~gl~~d--~dG~l~v~~~-----~~~~v~~~--~~~g~ 117 (305)
T 3dr2_A 58 TLVWSDLVGRRVLGWRED-GTVDVLL---------DATAF-TNGNAVD--AQQRLVHCEH-----GRRAITRS--DADGQ 117 (305)
T ss_dssp EEEEEETTTTEEEEEETT-SCEEEEE---------ESCSC-EEEEEEC--TTSCEEEEET-----TTTEEEEE--CTTSC
T ss_pred EEEEEECCCCEEEEEeCC-CCEEEEe---------CCCCc-cceeeEC--CCCCEEEEEC-----CCCEEEEE--CCCCC
Confidence 589998777789999984 4444332 11111 1123222 5788887653 12445555 44455
Q ss_pred EEEEecccHHHHHHhhhccccCCccEEEEeeCCEEEEEee-----------------cCCeEEEEECCCCceEEc
Q 018005 288 WIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCY-----------------TWPEILYYNVARRTWHWL 345 (362)
Q Consensus 288 W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-----------------~~~~v~~yd~~~~~w~~~ 345 (362)
.+.+...... .. .....-.++..++.|++... ....|+.||+++++.+.+
T Consensus 118 ~~~~~~~~~~-----~~---~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~ 184 (305)
T 3dr2_A 118 AHLLVGRYAG-----KR---LNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRM 184 (305)
T ss_dssp EEEEECEETT-----EE---CSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEE
T ss_pred EEEEEeccCC-----Cc---cCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEE
Confidence 5444321100 00 00011123344566787521 024589999988877665
No 216
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=45.86 E-value=72 Score=30.35 Aligned_cols=77 Identities=12% Similarity=0.241 Sum_probs=45.6
Q ss_pred eEEEEeCCCCc--ccccccCCCCccccccCCCcccEE-ECCEEEEEecCCcEEEEEEcCCC--eeecCCCCCcccccCCC
Q 018005 170 YAFVYDSTDQS--WSKFDIDGFPSMILSQSSHQEGVF-YKGSLYFTTPEPFSIVRFDLENG--IWETPNDANDHMTMMLP 244 (362)
Q Consensus 170 ~~~vy~s~~~~--W~~~~~~~~p~~~~~~~~~~~~v~-~~G~ly~~~~~~~~i~~~D~~~~--~w~~~~~p~~~~~~~~p 244 (362)
.+..+|..+++ |+... ..|. ...++. .+|.+|. +.....+.+||.++. .|+. . ++
T Consensus 454 ~l~A~D~~tG~~~W~~~~--~~~~-------~~g~~~tagg~vf~-gt~dg~l~A~D~~tG~~lW~~-~---------l~ 513 (599)
T 1w6s_A 454 QIKAYNAITGDYKWEKME--RFAV-------WGGTMATAGDLVFY-GTLDGYLKARDSDTGDLLWKF-K---------IP 513 (599)
T ss_dssp EEEEECTTTCCEEEEEEE--SSCC-------CSBCEEETTTEEEE-ECTTSEEEEEETTTCCEEEEE-E---------CS
T ss_pred eEEEEECCCCCEEeEecC--CCCc-------cCcceEecCCEEEE-ECCCCeEEEEECCCCCEEEEe-e---------CC
Confidence 67778887764 87754 3221 122333 4677776 444457999999865 5765 3 34
Q ss_pred CcccccceeecccCCCeEEEEEEe
Q 018005 245 HELTFFRLVNDGEESNKLYLIGGV 268 (362)
Q Consensus 245 ~~~~~~~lv~~~~~~G~L~vv~~~ 268 (362)
.+.....++-+ .+|++||+...
T Consensus 514 ~g~~~~P~~y~--~~G~qyv~~~~ 535 (599)
T 1w6s_A 514 SGAIGYPMTYT--HKGTQYVAIYY 535 (599)
T ss_dssp SCCCSCCEEEE--ETTEEEEEEEE
T ss_pred CCcEeccEEEE--eCCEEEEEEEc
Confidence 33333233323 69999988653
No 217
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=45.50 E-value=2.2e+02 Score=27.56 Aligned_cols=116 Identities=11% Similarity=0.025 Sum_probs=58.9
Q ss_pred EecCCceEEEecCCCCeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCcccccc
Q 018005 106 LSSSKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFD 185 (362)
Q Consensus 106 ~~s~~Gll~~~~~~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~ 185 (362)
+...+|-+.+..+..+.+..+||.++++..+............++.... ...+. ++. ...+..|++.++..+...
T Consensus 478 ~~d~~g~lWi~~~t~~Gl~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~-~g~lW-igt---~~Gl~~~~~~~~~~~~~~ 552 (758)
T 3ott_A 478 IPDNEGNVWVLLYNNKGIDKINPRTREVTKLFADELTGEKSPNYLLCDE-DGLLW-VGF---HGGVMRINPKDESQQSIS 552 (758)
T ss_dssp EECTTSCEEEEETTCSSEEEEETTTTEEEEECTTTSCGGGCEEEEEECT-TSCEE-EEE---TTEEEEECC--CCCCBCC
T ss_pred EEcCCCCEEEEccCCCCcEEEeCCCCceEEecCCCcCCCcccceEEECC-CCCEE-EEe---cCceEEEecCCCceEEec
Confidence 3445565555211235688999999998876432111111111222111 11333 232 135889999888876553
Q ss_pred cCCCCccccccCCCcccEEECCEEEEEecCCcEEEEEEcCCCeeecCC
Q 018005 186 IDGFPSMILSQSSHQEGVFYKGSLYFTTPEPFSIVRFDLENGIWETPN 233 (362)
Q Consensus 186 ~~~~p~~~~~~~~~~~~v~~~G~ly~~~~~~~~i~~~D~~~~~w~~~~ 233 (362)
.+++|. ......+.-+|.+++-+.. .+..||+++.++....
T Consensus 553 ~~gl~~-----~~i~~i~~~~g~lWi~t~~--Gl~~~~~~~~~~~~~~ 593 (758)
T 3ott_A 553 FGSFSN-----NEILSMTCVKNSIWVSTTN--GLWIIDRKTMDARQQN 593 (758)
T ss_dssp CCC--------CCEEEEEEETTEEEEEESS--CEEEEETTTCCEEEC-
T ss_pred ccCCCc-----cceEEEEECCCCEEEECCC--CeEEEcCCCceeEEec
Confidence 113332 1112223347877655544 5999999998887653
No 218
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=45.03 E-value=1.5e+02 Score=25.58 Aligned_cols=153 Identities=12% Similarity=0.031 Sum_probs=71.3
Q ss_pred CceEEEecCCCCeEEEEeCCcC-c-eeeccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCcccccccC
Q 018005 110 KGLLCFSLPSSSSFLVCNLVTL-S-SRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDID 187 (362)
Q Consensus 110 ~Gll~~~~~~~~~~~v~NP~t~-~-w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~~~ 187 (362)
++-+++.+..++.+.+||..+. + ...+.. .......+++.+.+ +.++.++ ....+.+||..++.-...-.
T Consensus 217 ~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~--h~~~v~~v~~~p~~---~~l~s~s--~D~~i~lwd~~~~~~~~~~~- 288 (380)
T 3iz6_a 217 NANMFISGSCDTTVRLWDLRITSRAVRTYHG--HEGDINSVKFFPDG---QRFGTGS--DDGTCRLFDMRTGHQLQVYN- 288 (380)
T ss_dssp SCCEEEEEETTSCEEEEETTTTCCCCEEECC--CSSCCCEEEECTTS---SEEEEEC--SSSCEEEEETTTTEEEEEEC-
T ss_pred CCCEEEEEECCCeEEEEECCCCCcceEEECC--cCCCeEEEEEecCC---CeEEEEc--CCCeEEEEECCCCcEEEEec-
Confidence 4544444445678999998633 2 111111 11122344454332 2333333 34578999998764221110
Q ss_pred CCCccccccCCCcccEEE--CCEEEEEecCCcEEEEEEcCCCeeec-CCCCCcccccCCCCcccccceeecccCCCeEEE
Q 018005 188 GFPSMILSQSSHQEGVFY--KGSLYFTTPEPFSIVRFDLENGIWET-PNDANDHMTMMLPHELTFFRLVNDGEESNKLYL 264 (362)
Q Consensus 188 ~~p~~~~~~~~~~~~v~~--~G~ly~~~~~~~~i~~~D~~~~~w~~-~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~L~v 264 (362)
..+............+.+ +|.+.+.+.....+..+|..+.+-.. +.... ......-..+... -+|++++
T Consensus 289 ~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~------~~h~~~v~~l~~s--~dg~~l~ 360 (380)
T 3iz6_a 289 REPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQ------NSHEGRISCLGLS--SDGSALC 360 (380)
T ss_dssp CCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSC------SSCCCCCCEEEEC--SSSSEEE
T ss_pred ccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEeccc------CCCCCceEEEEEC--CCCCEEE
Confidence 000000000011223333 57776666666679999987654321 11000 0011111122211 5788766
Q ss_pred EEEeecCCccceEEEEEEC
Q 018005 265 IGGVGRNGISTTMKLWELG 283 (362)
Q Consensus 265 v~~~~~~~~~~~i~vw~l~ 283 (362)
.++ ...++.+|.+.
T Consensus 361 sgs-----~D~~i~iW~~~ 374 (380)
T 3iz6_a 361 TGS-----WDKNLKIWAFS 374 (380)
T ss_dssp EEC-----TTSCEEEEECC
T ss_pred Eee-----CCCCEEEEecC
Confidence 665 34789999885
No 219
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=44.84 E-value=2.2e+02 Score=27.36 Aligned_cols=59 Identities=14% Similarity=0.340 Sum_probs=33.8
Q ss_pred eEEEEeCCCC--cccccccCCCCccc----cccCCCcccEEECCEEEEEecCCcEEEEEEcCCC--eeec
Q 018005 170 YAFVYDSTDQ--SWSKFDIDGFPSMI----LSQSSHQEGVFYKGSLYFTTPEPFSIVRFDLENG--IWET 231 (362)
Q Consensus 170 ~~~vy~s~~~--~W~~~~~~~~p~~~----~~~~~~~~~v~~~G~ly~~~~~~~~i~~~D~~~~--~w~~ 231 (362)
.++.+|..++ .|+... ..+... .........++.+|.+|+.+.+. .+.++|.++. .|+.
T Consensus 88 ~v~AlD~~tG~~~W~~~~--~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~dg-~l~alD~~tG~~~W~~ 154 (677)
T 1kb0_A 88 VVHAIDTRTGNRIWTYDP--QIDRSTGFKGCCDVVNRGVALWKGKVYVGAWDG-RLIALDAATGKEVWHQ 154 (677)
T ss_dssp CEEEEETTTTEEEEEECC--CCCGGGGGGSSSCSCCCCCEEETTEEEEECTTS-EEEEEETTTCCEEEEE
T ss_pred eEEEEECCCCcEEEEEcC--CCCccccccccccCCCCCceEECCEEEEEcCCC-EEEEEECCCCCEEeee
Confidence 5666776554 476554 222100 00112234566789999776554 7999999754 6775
No 220
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=44.55 E-value=2.1e+02 Score=27.09 Aligned_cols=60 Identities=13% Similarity=0.270 Sum_probs=32.9
Q ss_pred CeEEEEeC-CCC--cccccccCCCCccc----cccCCCcccEE--ECCE----EEEEecCCcEEEEEEcCCC--eeec
Q 018005 169 NYAFVYDS-TDQ--SWSKFDIDGFPSMI----LSQSSHQEGVF--YKGS----LYFTTPEPFSIVRFDLENG--IWET 231 (362)
Q Consensus 169 ~~~~vy~s-~~~--~W~~~~~~~~p~~~----~~~~~~~~~v~--~~G~----ly~~~~~~~~i~~~D~~~~--~w~~ 231 (362)
..++.+|. .++ .|+... ..+... .........++ .+|+ +|+.+... .+.++|.++. .|+.
T Consensus 73 ~~v~AlD~~~tG~~lW~~~~--~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg-~l~AlDa~TG~~~W~~ 147 (599)
T 1w6s_A 73 NNTFALGLDDPGTILWQDKP--KQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDG-NVAALNAETGETVWKV 147 (599)
T ss_dssp TCEEEEETTCTTSEEEEECC--CCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTS-EEEEEETTTCCEEEEE
T ss_pred CEEEEEeCCCCCcEEEEECC--CCCccccccccccccccceEEEecCCcceeEEEEEcCCC-EEEEEECCCCCEEEee
Confidence 35667776 554 487654 222100 00011222344 5777 88765544 7999998764 6875
No 221
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=44.26 E-value=2.2e+02 Score=27.14 Aligned_cols=194 Identities=12% Similarity=0.122 Sum_probs=88.8
Q ss_pred ecCCceEEEecCCCCeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCc-ccccc
Q 018005 107 SSSKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQS-WSKFD 185 (362)
Q Consensus 107 ~s~~Gll~~~~~~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~-W~~~~ 185 (362)
.+.+|-+++.+..++.+.+||..+++-...-. .+......+++.+.+. .+ +.++ ....+.+||..... .....
T Consensus 438 ~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~-~h~~~v~~~~~s~~~~--~l-~s~s--~D~~i~iwd~~~~~~~~~~~ 511 (694)
T 3dm0_A 438 LSSDGQFALSGSWDGELRLWDLAAGVSTRRFV-GHTKDVLSVAFSLDNR--QI-VSAS--RDRTIKLWNTLGECKYTISE 511 (694)
T ss_dssp ECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CCSSCEEEEEECTTSS--CE-EEEE--TTSCEEEECTTSCEEEEECS
T ss_pred ECCCCCEEEEEeCCCcEEEEECCCCcceeEEe-CCCCCEEEEEEeCCCC--EE-EEEe--CCCEEEEEECCCCcceeecc
Confidence 34455444444456899999998886432111 1111222344433221 22 3333 34578888865432 22111
Q ss_pred cCCCCccccccCCCcccEEE--CC--EEEEEecCCcEEEEEEcCCCeeecCCCCCcccccCCCCcccccceeecccCCCe
Q 018005 186 IDGFPSMILSQSSHQEGVFY--KG--SLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNK 261 (362)
Q Consensus 186 ~~~~p~~~~~~~~~~~~v~~--~G--~ly~~~~~~~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~ 261 (362)
.... .......+.+ ++ ...+.++....|..+|+.+.+....... .........+ . -+|+
T Consensus 512 --~~~~----h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~-------h~~~v~~v~~--s--pdg~ 574 (694)
T 3dm0_A 512 --GGEG----HRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAG-------HTGYVSTVAV--S--PDGS 574 (694)
T ss_dssp --STTS----CSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECC-------CSSCEEEEEE--C--TTSS
T ss_pred --CCCC----CCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcC-------CCCCEEEEEE--e--CCCC
Confidence 0000 0011122222 22 2333444445789999987644321111 1111112222 1 5788
Q ss_pred EEEEEEeecCCccceEEEEEECCCCCEEEEecccHHHHHHhhhccccCCccEEEEeeCCEEEEEeecCCeEEEEECCCCc
Q 018005 262 LYLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYTWPEILYYNVARRT 341 (362)
Q Consensus 262 L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~v~~yd~~~~~ 341 (362)
+++.++ ....+.+|++.... .+..+.. .......++..++.++... ..+.|.+||+++++
T Consensus 575 ~l~sg~-----~Dg~i~iwd~~~~~---~~~~~~~-----------~~~v~~~~~sp~~~~l~~~-~~~~i~iwd~~~~~ 634 (694)
T 3dm0_A 575 LCASGG-----KDGVVLLWDLAEGK---KLYSLEA-----------NSVIHALCFSPNRYWLCAA-TEHGIKIWDLESKS 634 (694)
T ss_dssp EEEEEE-----TTSBCEEEETTTTE---EEECCBC-----------SSCEEEEEECSSSSEEEEE-ETTEEEEEETTTTE
T ss_pred EEEEEe-----CCCeEEEEECCCCc---eEEEecC-----------CCcEEEEEEcCCCcEEEEE-cCCCEEEEECCCCC
Confidence 877766 23688999875322 2322210 0001112223333333332 35568899998875
Q ss_pred eE
Q 018005 342 WH 343 (362)
Q Consensus 342 w~ 343 (362)
-.
T Consensus 635 ~~ 636 (694)
T 3dm0_A 635 IV 636 (694)
T ss_dssp EE
T ss_pred Ch
Confidence 43
No 222
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=43.88 E-value=1.5e+02 Score=25.08 Aligned_cols=209 Identities=9% Similarity=0.055 Sum_probs=99.3
Q ss_pred ecCCceEEEecCCCCeEEEEeCCcC--ceeeccCCC------CCC-ccceEEEEeCCCceEEEEEeeecCCCeEEEEeCC
Q 018005 107 SSSKGLLCFSLPSSSSFLVCNLVTL--SSRTIDFPT------YPF-DFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDST 177 (362)
Q Consensus 107 ~s~~Gll~~~~~~~~~~~v~NP~t~--~w~~lP~~~------~~~-~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~ 177 (362)
...+|-+++.......+.++|+..+ .-..+.... ... .-..+++++. .-.+++... .....+.+|+..
T Consensus 98 ~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~--~g~lyv~d~-~~~~~I~~~~~~ 174 (329)
T 3fvz_A 98 IDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPS--TGAVFVSDG-YCNSRIVQFSPS 174 (329)
T ss_dssp ECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTT--TCCEEEEEC-SSCCEEEEECTT
T ss_pred ECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCC--CCeEEEEeC-CCCCeEEEEcCC
Confidence 3446656666555678999998765 233332111 011 1124455431 224555442 124578889854
Q ss_pred CCcccccccCCCCccc-cccCCCcccEEE--C-CEEEEEecCCcEEEEEEcCCCeeec-CCCCCcccccCCCCcccccce
Q 018005 178 DQSWSKFDIDGFPSMI-LSQSSHQEGVFY--K-GSLYFTTPEPFSIVRFDLENGIWET-PNDANDHMTMMLPHELTFFRL 252 (362)
Q Consensus 178 ~~~W~~~~~~~~p~~~-~~~~~~~~~v~~--~-G~ly~~~~~~~~i~~~D~~~~~w~~-~~~p~~~~~~~~p~~~~~~~l 252 (362)
...-......+..... ........++.+ + |.+|+.......|..||+.+.++.. +..+ ..+.....+
T Consensus 175 g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~--------~~~~~~~~~ 246 (329)
T 3fvz_A 175 GKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHA--------SFGRNVFAI 246 (329)
T ss_dssp SCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCT--------TTTTCEEEE
T ss_pred CCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEecc--------ccCCCccee
Confidence 3322222100000000 000122345665 4 8999988777789999998655533 2211 011111122
Q ss_pred eecccCCCeEEEEEEeec--CCccceEEEEEECCCCCEEE-EecccHHHHHHhhhccccCCccEEEEeeCCEEEEEeecC
Q 018005 253 VNDGEESNKLYLIGGVGR--NGISTTMKLWELGCGGNWIE-VERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYTW 329 (362)
Q Consensus 253 v~~~~~~G~L~vv~~~~~--~~~~~~i~vw~l~~~~~W~~-v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 329 (362)
.. ..|.++...+..- +.....+.+|.+. .++... +...+. . .....-.++..++.||+.....
T Consensus 247 ~~---~pg~~~~~~g~~~v~~~~~~~v~~~~~~-~g~~~~~~~~~~~-----~-----~~~p~~ia~~~dG~lyvad~~~ 312 (329)
T 3fvz_A 247 SY---IPGFLFAVNGKPYFGDQEPVQGFVMNFS-SGEIIDVFKPVRK-----H-----FDMPHDIVASEDGTVYIGDAHT 312 (329)
T ss_dssp EE---ETTEEEEEECCCCTTCSCCCCEEEEETT-TCCEEEEECCSSS-----C-----CSSEEEEEECTTSEEEEEESSS
T ss_pred ee---cCCEEEEeCCCEEeccCCCcEEEEEEcC-CCeEEEEEcCCCC-----c-----cCCeeEEEECCCCCEEEEECCC
Confidence 21 2255555544210 1223567788664 344222 211100 0 0111112334456899988777
Q ss_pred CeEEEEECCCC
Q 018005 330 PEILYYNVARR 340 (362)
Q Consensus 330 ~~v~~yd~~~~ 340 (362)
+.|..|+++.+
T Consensus 313 ~~I~~~~~~~~ 323 (329)
T 3fvz_A 313 NTVWKFTLTEK 323 (329)
T ss_dssp CCEEEEEEEEC
T ss_pred CEEEEEeCCcc
Confidence 88999998753
No 223
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=43.81 E-value=1.7e+02 Score=25.80 Aligned_cols=198 Identities=10% Similarity=0.103 Sum_probs=88.5
Q ss_pred EecCCCCeEEEEeCCcCc---eeeccCC---CCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCc-ccccccC
Q 018005 115 FSLPSSSSFLVCNLVTLS---SRTIDFP---TYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQS-WSKFDID 187 (362)
Q Consensus 115 ~~~~~~~~~~v~NP~t~~---w~~lP~~---~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~-W~~~~~~ 187 (362)
+.+..++.+.+||..++. +..-+.. ........+++.+.. . .+++.++ ....+.+||..++. .+...
T Consensus 198 ~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~-~-~~l~s~~--~dg~i~i~d~~~~~~~~~~~-- 271 (430)
T 2xyi_A 198 LSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLH-E-SLFGSVA--DDQKLMIWDTRNNNTSKPSH-- 271 (430)
T ss_dssp EEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSC-T-TEEEEEE--TTSEEEEEETTCSCSSSCSE--
T ss_pred EEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCC-C-CEEEEEe--CCCeEEEEECCCCCCCccee--
Confidence 334346789999998732 1111110 111122334443322 2 2333333 34689999998653 11111
Q ss_pred CCCccccccCCCcccEEE--CCE-EEEEecCCcEEEEEEcCCCe--eecCCCCCcccccCCCCcccccceeecccCCC-e
Q 018005 188 GFPSMILSQSSHQEGVFY--KGS-LYFTTPEPFSIVRFDLENGI--WETPNDANDHMTMMLPHELTFFRLVNDGEESN-K 261 (362)
Q Consensus 188 ~~p~~~~~~~~~~~~v~~--~G~-ly~~~~~~~~i~~~D~~~~~--w~~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G-~ 261 (362)
.+.. .......+.+ +|. +++.++....|..||+.+.. ...+. . ........... -+| .
T Consensus 272 ~~~~----~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~-~-------h~~~v~~i~~s----p~~~~ 335 (430)
T 2xyi_A 272 TVDA----HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFE-S-------HKDEIFQVQWS----PHNET 335 (430)
T ss_dssp EEEC----CSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEE-C-------CSSCEEEEEEC----SSCTT
T ss_pred Eeec----CCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEee-c-------CCCCEEEEEEC----CCCCC
Confidence 0000 0011223333 243 66667666689999997631 11111 0 11111122221 345 4
Q ss_pred EEEEEEeecCCccceEEEEEECCCCCEEEEecccHHHHH---HhhhccccCCccEEEE-e--eCCEEEEEeecCCeEEEE
Q 018005 262 LYLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCR---KFMSVCYHNYDHVYCF-W--HQGMICVCCYTWPEILYY 335 (362)
Q Consensus 262 L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~~p~~~~~---~~~~~~~~~~~~~~~~-~--~~~~i~~~~~~~~~v~~y 335 (362)
+++.++ ....+.||.+...+.-.. +..... .....-.++...+..+ . .+..+++.....+.|.+|
T Consensus 336 ~l~s~~-----~d~~i~iwd~~~~~~~~~----~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw 406 (430)
T 2xyi_A 336 ILASSG-----TDRRLHVWDLSKIGEEQS----TEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVW 406 (430)
T ss_dssp EEEEEE-----TTSCCEEEEGGGTTCCCC----HHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEE
T ss_pred EEEEEe-----CCCcEEEEeCCCCccccC----ccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEe
Confidence 666665 236789998864321000 000000 0000000111223333 2 223255555567789999
Q ss_pred ECCCCceE
Q 018005 336 NVARRTWH 343 (362)
Q Consensus 336 d~~~~~w~ 343 (362)
++.++.+.
T Consensus 407 ~~~~~~~~ 414 (430)
T 2xyi_A 407 QMAENVYN 414 (430)
T ss_dssp EECHHHHC
T ss_pred Eccccccc
Confidence 99887665
No 224
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=43.59 E-value=1.5e+02 Score=25.05 Aligned_cols=155 Identities=9% Similarity=0.035 Sum_probs=74.4
Q ss_pred CeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCc-c-cccccCCCCccccccCC
Q 018005 121 SSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQS-W-SKFDIDGFPSMILSQSS 198 (362)
Q Consensus 121 ~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~-W-~~~~~~~~p~~~~~~~~ 198 (362)
+.++++|+.|++....-....-..-.++++++.+ ++++... ....+.+|+...+. . ........+........
T Consensus 69 ~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g---~l~v~d~--~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~ 143 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG---NYWVTDV--ALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFC 143 (329)
T ss_dssp CCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS---CEEEEET--TTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCS
T ss_pred CcEEEEECCCCeEEeccCCCccCCceEEEECCCC---CEEEEEC--CCCEEEEEeCCCCeEEEEEecccCCCCCCccccC
Confidence 4689999998886543221111122345555433 3555433 34588899986542 1 11110000000000111
Q ss_pred CcccEEE---CCEEEEEec-CCcEEEEEEcCCCeeecCCCCCcccccCCCCccc-ccceeecccCC-CeEEEEEEeecCC
Q 018005 199 HQEGVFY---KGSLYFTTP-EPFSIVRFDLENGIWETPNDANDHMTMMLPHELT-FFRLVNDGEES-NKLYLIGGVGRNG 272 (362)
Q Consensus 199 ~~~~v~~---~G~ly~~~~-~~~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~-~~~lv~~~~~~-G~L~vv~~~~~~~ 272 (362)
...++.+ +|.+|+... ....|..||........+....... ...+.... -..+... -+ |.||+...
T Consensus 144 ~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~~~~~~~~~g~~~-~~~~~~~~~p~gia~d--~~~g~l~v~d~----- 215 (329)
T 3fvz_A 144 QPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSGKFVTQWGEESSGS-SPRPGQFSVPHSLALV--PHLDQLCVADR----- 215 (329)
T ss_dssp SEEEEEECTTTCCEEEEECSSCCEEEEECTTSCEEEEECEECCSS-SCCTTEESCEEEEEEE--TTTTEEEEEET-----
T ss_pred CCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCCCEEEEeccCCCCC-CCCCcccCCCcEEEEE--CCCCEEEEEEC-----
Confidence 2334555 589999885 5668999997655433322110000 00011111 1223321 34 89999875
Q ss_pred ccceEEEEEECCCCCEE
Q 018005 273 ISTTMKLWELGCGGNWI 289 (362)
Q Consensus 273 ~~~~i~vw~l~~~~~W~ 289 (362)
....|.+|..+ .++..
T Consensus 216 ~~~~I~~~~~~-~G~~~ 231 (329)
T 3fvz_A 216 ENGRIQCFKTD-TKEFV 231 (329)
T ss_dssp TTTEEEEEETT-TCCEE
T ss_pred CCCEEEEEECC-CCcEE
Confidence 34678888764 34443
No 225
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=43.07 E-value=1.3e+02 Score=24.16 Aligned_cols=185 Identities=11% Similarity=0.030 Sum_probs=88.9
Q ss_pred CCCeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCC-CcccccccCCCCccccccC
Q 018005 119 SSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTD-QSWSKFDIDGFPSMILSQS 197 (362)
Q Consensus 119 ~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~-~~W~~~~~~~~p~~~~~~~ 197 (362)
....+++||+.+++...+.... .....+.+.+.+. . ++++. ...+.+||..+ +...... .... ..
T Consensus 20 ~~~~i~~~d~~~~~~~~~~~~~--~~v~~~~~spdg~--~-l~~~~---~~~i~~~d~~~~~~~~~~~--~~~~----~~ 85 (297)
T 2ojh_A 20 MRSSIEIFNIRTRKMRVVWQTP--ELFEAPNWSPDGK--Y-LLLNS---EGLLYRLSLAGDPSPEKVD--TGFA----TI 85 (297)
T ss_dssp CCEEEEEEETTTTEEEEEEEES--SCCEEEEECTTSS--E-EEEEE---TTEEEEEESSSCCSCEECC--CTTC----CC
T ss_pred cceeEEEEeCCCCceeeeccCC--cceEeeEECCCCC--E-EEEEc---CCeEEEEeCCCCCCceEec--cccc----cc
Confidence 3468999999999877654321 1223444444332 2 22222 34899999988 7655443 1110 00
Q ss_pred CCcccEEE-CCEEEEEec----CCcEEEEEEcCCCeeecCCCCCcccccCCCCcccccceeecccCCCeEEEEEEeecCC
Q 018005 198 SHQEGVFY-KGSLYFTTP----EPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNG 272 (362)
Q Consensus 198 ~~~~~v~~-~G~ly~~~~----~~~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~L~vv~~~~~~~ 272 (362)
......+. +|...+... ....|..+|..+.....+... .......+. -+|+..++...
T Consensus 86 ~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~---------~~~~~~~~s----pdg~~l~~~~~---- 148 (297)
T 2ojh_A 86 CNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKN---------LPSYWHGWS----PDGKSFTYCGI---- 148 (297)
T ss_dssp BCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCCEECCSS---------SSEEEEEEC----TTSSEEEEEEE----
T ss_pred cccceEECCCCCEEEEEEeCCCCcceEEEEECCCCceEEeecC---------CCccceEEC----CCCCEEEEEEC----
Confidence 11112222 454433333 134688888876654443211 111111221 46775554332
Q ss_pred ccceEEEEEECCCC-CEEEEecccHHHHHHhhhccccCCccEEEEe-eCCEEEEEeec--CCeEEEEECCCCceEEcCC
Q 018005 273 ISTTMKLWELGCGG-NWIEVERVPEMMCRKFMSVCYHNYDHVYCFW-HQGMICVCCYT--WPEILYYNVARRTWHWLPS 347 (362)
Q Consensus 273 ~~~~i~vw~l~~~~-~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~--~~~v~~yd~~~~~w~~~~~ 347 (362)
....+.+|.++..+ ....+...+ .......+. ++..+++.... ...++.+++..+....+..
T Consensus 149 ~~~~~~l~~~~~~~~~~~~~~~~~-------------~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~ 214 (297)
T 2ojh_A 149 RDQVFDIYSMDIDSGVETRLTHGE-------------GRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITD 214 (297)
T ss_dssp ETTEEEEEEEETTTCCEEECCCSS-------------SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCC
T ss_pred CCCceEEEEEECCCCcceEcccCC-------------CccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEec
Confidence 12568899886543 344332211 001111122 33455554422 2356666767777766644
No 226
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=41.37 E-value=1.7e+02 Score=25.03 Aligned_cols=195 Identities=10% Similarity=0.026 Sum_probs=88.1
Q ss_pred EEecCCceEEEecCCCCeEEEEeCCcCceeeccCC-----CCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCC
Q 018005 105 LLSSSKGLLCFSLPSSSSFLVCNLVTLSSRTIDFP-----TYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQ 179 (362)
Q Consensus 105 ~~~s~~Gll~~~~~~~~~~~v~NP~t~~w~~lP~~-----~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~ 179 (362)
+..+-+|-.++.++.++.+.+|+..+..-...... ........+.+.+. .-.++. ++ ....+.+||.+++
T Consensus 112 ~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~l~t-~s--~D~~v~lwd~~~~ 186 (354)
T 2pbi_B 112 CAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNS--DMQILT-AS--GDGTCALWDVESG 186 (354)
T ss_dssp EEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSS--SSEEEE-EE--TTSEEEEEETTTC
T ss_pred EEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCC--CCEEEE-Ee--CCCcEEEEeCCCC
Confidence 33444554444444567888887755421111000 00011112223222 223333 22 3468999999876
Q ss_pred cccccccCCCCccccccCCCcccEEE----CCEEEEEecCCcEEEEEEcCCCeeecCCCCCcccccCCCCcccccceeec
Q 018005 180 SWSKFDIDGFPSMILSQSSHQEGVFY----KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVND 255 (362)
Q Consensus 180 ~W~~~~~~~~p~~~~~~~~~~~~v~~----~G~ly~~~~~~~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~~~lv~~ 255 (362)
.-...-. +.. .....+.+ +|...+.++....+..+|+.+.+....... ...... .+...
T Consensus 187 ~~~~~~~-~h~-------~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~-------h~~~v~--~v~~~ 249 (354)
T 2pbi_B 187 QLLQSFH-GHG-------ADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFET-------HESDVN--SVRYY 249 (354)
T ss_dssp CEEEEEE-CCS-------SCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECC-------CSSCEE--EEEEC
T ss_pred eEEEEEc-CCC-------CCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecC-------CCCCeE--EEEEe
Confidence 4321100 100 01111222 355555555555799999987654321101 111111 22211
Q ss_pred ccCCCeEEEEEEeecCCccceEEEEEECCCCCEEEEecccHHHHHHhhhccccCCccEE--EEeeCCEEEEEeecCCeEE
Q 018005 256 GEESNKLYLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVY--CFWHQGMICVCCYTWPEIL 333 (362)
Q Consensus 256 ~~~~G~L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~~~~~~~v~ 333 (362)
-+|.+++.++ ...++.+|++.....-.... .. ....... .+..++.+++.+...+.+.
T Consensus 250 --p~~~~l~s~s-----~D~~v~lwd~~~~~~~~~~~-~~------------~~~~~~~~~~~s~~g~~l~~g~~d~~i~ 309 (354)
T 2pbi_B 250 --PSGDAFASGS-----DDATCRLYDLRADREVAIYS-KE------------SIIFGASSVDFSLSGRLLFAGYNDYTIN 309 (354)
T ss_dssp --TTSSEEEEEE-----TTSCEEEEETTTTEEEEEEC-CT------------TCCSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred --CCCCEEEEEe-----CCCeEEEEECCCCcEEEEEc-CC------------CcccceeEEEEeCCCCEEEEEECCCcEE
Confidence 4677777665 23789999875322111111 00 0001111 2233444555555667888
Q ss_pred EEECCCCc
Q 018005 334 YYNVARRT 341 (362)
Q Consensus 334 ~yd~~~~~ 341 (362)
+||+.+++
T Consensus 310 vwd~~~~~ 317 (354)
T 2pbi_B 310 VWDVLKGS 317 (354)
T ss_dssp EEETTTCS
T ss_pred EEECCCCc
Confidence 99987654
No 227
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=40.59 E-value=1.6e+02 Score=24.46 Aligned_cols=148 Identities=14% Similarity=0.071 Sum_probs=67.1
Q ss_pred ecCCceEEEecCCCCeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCccccccc
Q 018005 107 SSSKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDI 186 (362)
Q Consensus 107 ~s~~Gll~~~~~~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~~ 186 (362)
-+.+|-.++.+..++.+.+|+..+............. .....+... ...++ .++ ....+.+||.....-....
T Consensus 94 ~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~l~-s~s--~d~~~~~~d~~~~~~~~~~- 166 (340)
T 4aow_A 94 ISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKD-VLSVAFSSD--NRQIV-SGS--RDKTIKLWNTLGVCKYTVQ- 166 (340)
T ss_dssp ECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSC-EEEEEECTT--SSCEE-EEE--TTSCEEEECTTSCEEEEEC-
T ss_pred ECCCCCEEEEEcccccceEEeecccceeeeecCCCCc-eeEEEEeec--Cccce-eec--CCCeEEEEEeCCCceEEEE-
Confidence 3445543334434577888888887755443322111 111112111 11222 222 2346777876543221111
Q ss_pred CCCCccccccCCCcccEEE----CCEEEEEecCCcEEEEEEcCCCeeecCCCCCcccccCCCCcccccceeecccCCCeE
Q 018005 187 DGFPSMILSQSSHQEGVFY----KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKL 262 (362)
Q Consensus 187 ~~~p~~~~~~~~~~~~v~~----~G~ly~~~~~~~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~L 262 (362)
... .......+.+ .+.+.+.++....+..+|+.+.+....... ...... .+... -+|++
T Consensus 167 --~~~----~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~-------h~~~v~--~~~~s--~~~~~ 229 (340)
T 4aow_A 167 --DES----HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIG-------HTGYLN--TVTVS--PDGSL 229 (340)
T ss_dssp --SSS----CSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECC-------CSSCEE--EEEEC--TTSSE
T ss_pred --ecc----ccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecC-------CCCcEE--EEEEC--CCCCE
Confidence 000 0001111111 123344444555788899987655432111 112112 22211 57888
Q ss_pred EEEEEeecCCccceEEEEEEC
Q 018005 263 YLIGGVGRNGISTTMKLWELG 283 (362)
Q Consensus 263 ~vv~~~~~~~~~~~i~vw~l~ 283 (362)
++.++ ....+.+|++.
T Consensus 230 l~s~s-----~Dg~i~iwd~~ 245 (340)
T 4aow_A 230 CASGG-----KDGQAMLWDLN 245 (340)
T ss_dssp EEEEE-----TTCEEEEEETT
T ss_pred EEEEe-----CCCeEEEEEec
Confidence 77766 23688999774
No 228
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=40.28 E-value=1.6e+02 Score=24.47 Aligned_cols=94 Identities=10% Similarity=-0.035 Sum_probs=47.7
Q ss_pred CCCeEEEEeCCcCc----eeeccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeC-CCCcccccccCC--CCc
Q 018005 119 SSSSFLVCNLVTLS----SRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDS-TDQSWSKFDIDG--FPS 191 (362)
Q Consensus 119 ~~~~~~v~NP~t~~----w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s-~~~~W~~~~~~~--~p~ 191 (362)
.++.+.+||..+++ ...+. ........+.+.+.+ .+ .++.++ ....+.+||. .++.-.... . ...
T Consensus 31 ~d~~v~iw~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~-~~-~l~~~~--~dg~i~~wd~~~~~~~~~~~--~~~~~~ 102 (342)
T 1yfq_A 31 WDGSLTVYKFDIQAKNVDLLQSL--RYKHPLLCCNFIDNT-DL-QIYVGT--VQGEILKVDLIGSPSFQALT--NNEANL 102 (342)
T ss_dssp TTSEEEEEEEETTTTEEEEEEEE--ECSSCEEEEEEEESS-SE-EEEEEE--TTSCEEEECSSSSSSEEECB--SCCCCS
T ss_pred CCCeEEEEEeCCCCccccceeee--ecCCceEEEEECCCC-Cc-EEEEEc--CCCeEEEEEeccCCceEecc--ccCCCC
Confidence 35788899988876 33222 112223344454432 21 233333 3457899998 777554433 2 111
Q ss_pred cccccCCCcccEEECCEEEEEecCCcEEEEEEcCC
Q 018005 192 MILSQSSHQEGVFYKGSLYFTTPEPFSIVRFDLEN 226 (362)
Q Consensus 192 ~~~~~~~~~~~v~~~G~ly~~~~~~~~i~~~D~~~ 226 (362)
......+..|...+.++....+..+|+.+
T Consensus 103 ------~v~~l~~~~~~~l~s~~~d~~i~iwd~~~ 131 (342)
T 1yfq_A 103 ------GICRICKYGDDKLIAASWDGLIEVIDPRN 131 (342)
T ss_dssp ------CEEEEEEETTTEEEEEETTSEEEEECHHH
T ss_pred ------ceEEEEeCCCCEEEEEcCCCeEEEEcccc
Confidence 11112222244444555555788898864
No 229
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=40.11 E-value=2.7e+02 Score=27.09 Aligned_cols=204 Identities=13% Similarity=0.169 Sum_probs=100.8
Q ss_pred ecCCceEEEecCCCCeEEEEeCCcCceeeccCCCC-------CCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCC
Q 018005 107 SSSKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTY-------PFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQ 179 (362)
Q Consensus 107 ~s~~Gll~~~~~~~~~~~v~NP~t~~w~~lP~~~~-------~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~ 179 (362)
...+|-|.+.. ..+.+..+|+.++++...+.... ......+..+.. . .++.++. ....+.+|+..++
T Consensus 364 ~d~~g~lWiGt-~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~--g-~~lWigt--~~~Gl~~~d~~~~ 437 (795)
T 4a2l_A 364 EDKDKNLWIGT-NDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEK--K-SLVYIGT--HAGGLSILHRNSG 437 (795)
T ss_dssp ECTTSCEEEEE-SSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETT--T-TEEEEEE--TTTEEEEEETTTC
T ss_pred ECCCCCEEEEE-CCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCC--C-CEEEEEe--CcCceeEEeCCCC
Confidence 34456555433 23468899999999877754321 111222332222 1 2123332 1246889999888
Q ss_pred cccccccCCCCccccccCCCcccEEE--CCEEEEEecCCcEEEEEEcCCCeeecCCCCCcccccCCCCcccccceeeccc
Q 018005 180 SWSKFDIDGFPSMILSQSSHQEGVFY--KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGE 257 (362)
Q Consensus 180 ~W~~~~~~~~p~~~~~~~~~~~~v~~--~G~ly~~~~~~~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~~~lv~~~~ 257 (362)
.++... .... .+.. .....+.. +|.+++-+. ..+..||+++++|..+....+. .. ++.. .-..+...
T Consensus 438 ~~~~~~--~~~~-~l~~-~~v~~i~~d~~g~lwigt~--~Gl~~~~~~~~~~~~~~~~~~~-~~-~~~~-~i~~i~~d-- 506 (795)
T 4a2l_A 438 QVENFN--QRNS-QLVN-ENVYAILPDGEGNLWLGTL--SALVRFNPEQRSFTTIEKEKDG-TP-VVSK-QITTLFRD-- 506 (795)
T ss_dssp CEEEEC--TTTS-CCSC-SCEEEEEECSSSCEEEEES--SCEEEEETTTTEEEECCBCTTC-CB-CCCC-CEEEEEEC--
T ss_pred cEEEee--cCCC-CcCC-CeeEEEEECCCCCEEEEec--CceeEEeCCCCeEEEccccccc-cc-cCCc-eEEEEEEC--
Confidence 776654 1111 1111 11122333 477665444 3699999999999875321000 00 1111 11233323
Q ss_pred CCCeEEEEEEeecCCccceEEEEEECCCCCEEEEecccHHHHHHhhhccccCCccEEEE--eeCCEEEEEeecCCeEEEE
Q 018005 258 ESNKLYLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCF--WHQGMICVCCYTWPEILYY 335 (362)
Q Consensus 258 ~~G~L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~v~~y 335 (362)
.+|.|++... ..+.+|..+ .+.+ ........ ..+ ....+.++ ..++.|++... +.+..|
T Consensus 507 ~~g~lWigt~-------~Gl~~~~~~-~~~~-~~~~~~~~---~~l-----~~~~i~~i~~d~~g~lWigT~--~Gl~~~ 567 (795)
T 4a2l_A 507 SHKRLWIGGE-------EGLSVFKQE-GLDI-QKASILPV---SNV-----TKLFTNCIYEASNGIIWVGTR--EGFYCF 567 (795)
T ss_dssp TTCCEEEEES-------SCEEEEEEE-TTEE-EECCCSCS---CGG-----GGSCEEEEEECTTSCEEEEES--SCEEEE
T ss_pred CCCCEEEEeC-------CceEEEeCC-CCeE-EEecCCCC---CCC-----CCCeeEEEEECCCCCEEEEeC--CCceeE
Confidence 5788888653 334445442 2235 32211000 000 01123333 24567787653 379999
Q ss_pred ECCCCceEEcC
Q 018005 336 NVARRTWHWLP 346 (362)
Q Consensus 336 d~~~~~w~~~~ 346 (362)
|+++++++...
T Consensus 568 d~~~~~~~~~~ 578 (795)
T 4a2l_A 568 NEKDKQIKRYN 578 (795)
T ss_dssp ETTTTEEEEEC
T ss_pred CCCCCcEEEeC
Confidence 99999888764
No 230
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=39.39 E-value=2.4e+02 Score=26.32 Aligned_cols=202 Identities=11% Similarity=0.063 Sum_probs=92.6
Q ss_pred ecCCceEEEecCCCCeEEEEeCCcCceeeccCC-CCCCccceEEEEeCCCceEEEEEeeecC-CCeEEEEeCCCCccccc
Q 018005 107 SSSKGLLCFSLPSSSSFLVCNLVTLSSRTIDFP-TYPFDFELLTLVSTPSGYKIFMLFAKSF-PNYAFVYDSTDQSWSKF 184 (362)
Q Consensus 107 ~s~~Gll~~~~~~~~~~~v~NP~t~~w~~lP~~-~~~~~~~~~~~~~~~~~ykv~~~~~~~~-~~~~~vy~s~~~~W~~~ 184 (362)
-+-+|-.++.+..++.+.+||..+++....... ........+++.+.+ -.++..+.... ...+.++|.++. .
T Consensus 67 ~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg--~~l~~~~~~~~~~~~v~~wd~~~~----~ 140 (611)
T 1nr0_A 67 TSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSES--KRIAAVGEGRERFGHVFLFDTGTS----N 140 (611)
T ss_dssp ECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTS--CEEEEEECCSSCSEEEEETTTCCB----C
T ss_pred ECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCC--CEEEEEECCCCceeEEEEeeCCCC----c
Confidence 455665555555568899999877653221111 111223345555433 23333332211 235666664321 1
Q ss_pred ccCCCCccccccCCCcccEEE--CCE-EEEEecCCcEEEEEEcCCCeeecCCCCCcccccCCCCcccccceeecccCCCe
Q 018005 185 DIDGFPSMILSQSSHQEGVFY--KGS-LYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNK 261 (362)
Q Consensus 185 ~~~~~p~~~~~~~~~~~~v~~--~G~-ly~~~~~~~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~ 261 (362)
. .+.. ....-..+.+ +|. ....++...++..+|..+.+....... .......... . -+|+
T Consensus 141 ~--~l~g----h~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~-------H~~~V~~v~f--s--pdg~ 203 (611)
T 1nr0_A 141 G--NLTG----QARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGE-------HTKFVHSVRY--N--PDGS 203 (611)
T ss_dssp B--CCCC----CSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECC-------CSSCEEEEEE--C--TTSS
T ss_pred c--eecC----CCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeecc-------ccCceEEEEE--C--CCCC
Confidence 1 1111 0011122222 243 233445555788899776544321101 1111112122 1 5788
Q ss_pred EEEEEEeecCCccceEEEEEECCCCCEEEEecccHHHHHHhhhccccCCccEEEE--eeCCEEEEEeecCCeEEEEECCC
Q 018005 262 LYLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCF--WHQGMICVCCYTWPEILYYNVAR 339 (362)
Q Consensus 262 L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~v~~yd~~~ 339 (362)
+++.++ ...++.+|.+. .+.-.. .+... ... ...+...+.++ ..++..++.....+.+.+||+++
T Consensus 204 ~las~s-----~D~~i~lwd~~-~g~~~~--~~~~~----~~~-~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~ 270 (611)
T 1nr0_A 204 LFASTG-----GDGTIVLYNGV-DGTKTG--VFEDD----SLK-NVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVAT 270 (611)
T ss_dssp EEEEEE-----TTSCEEEEETT-TCCEEE--ECBCT----TSS-SCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred EEEEEE-----CCCcEEEEECC-CCcEee--eeccc----ccc-ccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCC
Confidence 877766 23789999874 333211 11000 000 00122233333 23444555555667899999998
Q ss_pred CceEE
Q 018005 340 RTWHW 344 (362)
Q Consensus 340 ~~w~~ 344 (362)
++...
T Consensus 271 ~~~~~ 275 (611)
T 1nr0_A 271 LKVEK 275 (611)
T ss_dssp TEEEE
T ss_pred Cceee
Confidence 76543
No 231
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=39.16 E-value=2e+02 Score=25.31 Aligned_cols=139 Identities=12% Similarity=0.063 Sum_probs=70.1
Q ss_pred eeeeeeCCCCCeEeecCCcCCCCCCceEEEecCCc-eEEEe-c-CCCCeEEEEeCCcCceeeccCCCCCCccceEEEEeC
Q 018005 77 QYPLYDSTHGTWRRLSLPYSLLLPSAATLLSSSKG-LLCFS-L-PSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVST 153 (362)
Q Consensus 77 ~~~~~d~~~~~w~~~~~~~~~~~~~~~~~~~s~~G-ll~~~-~-~~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~ 153 (362)
.+..+|...++...+.-. + .....+.-+-+| .|.+. . +....++++|..+++...+.... .....+.+.++
T Consensus 204 ~i~~~d~~tg~~~~l~~~---~-~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~--~~~~~~~~spd 277 (415)
T 2hqs_A 204 ALVIQTLANGAVRQVASF---P-RHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGR--SNNTEPTWFPD 277 (415)
T ss_dssp EEEEEETTTCCEEEEECC---S-SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCS--SCEEEEEECTT
T ss_pred EEEEEECCCCcEEEeecC---C-CcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcCCC--CcccceEECCC
Confidence 566677776665544311 1 112223344455 34433 2 22357999999999877665322 12223344433
Q ss_pred CCceEEEEEeeecCCCeEEEEeCCCCcccccccCCCCccccccCCCcccEEE--CCE-EEEEecC--CcEEEEEEcCCCe
Q 018005 154 PSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILSQSSHQEGVFY--KGS-LYFTTPE--PFSIVRFDLENGI 228 (362)
Q Consensus 154 ~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~~~~v~~--~G~-ly~~~~~--~~~i~~~D~~~~~ 228 (362)
+ -.++..........++++|..++.-+... .... ....+.+ +|. +++.... ...|..+|+.+.+
T Consensus 278 g--~~l~~~s~~~g~~~i~~~d~~~~~~~~l~--~~~~-------~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~ 346 (415)
T 2hqs_A 278 S--QNLAFTSDQAGRPQVYKVNINGGAPQRIT--WEGS-------QNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGG 346 (415)
T ss_dssp S--SEEEEEECTTSSCEEEEEETTSSCCEECC--CSSS-------EEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCC
T ss_pred C--CEEEEEECCCCCcEEEEEECCCCCEEEEe--cCCC-------cccCeEECCCCCEEEEEECcCCceEEEEEECCCCC
Confidence 2 23443332223447888898876543332 1100 1111222 454 4444332 3578999999877
Q ss_pred eecC
Q 018005 229 WETP 232 (362)
Q Consensus 229 w~~~ 232 (362)
...+
T Consensus 347 ~~~l 350 (415)
T 2hqs_A 347 VQVL 350 (415)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 6553
No 232
>1ddw_A GLGF-domain protein homer; pleckstrin homology domain fold, signaling protein; 1.70A {Rattus norvegicus} SCOP: b.55.1.4 PDB: 1ddv_A 2p8v_A 1i7a_A*
Probab=36.46 E-value=39 Score=24.52 Aligned_cols=40 Identities=15% Similarity=-0.072 Sum_probs=24.3
Q ss_pred CeEEEEeCCcC-ceeeccCCCCCCccceEEEEeCCCceEEEEEe
Q 018005 121 SSFLVCNLVTL-SSRTIDFPTYPFDFELLTLVSTPSGYKIFMLF 163 (362)
Q Consensus 121 ~~~~v~NP~t~-~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~ 163 (362)
-.++.+||.|+ .|....... ....+-.+...+.|+|+.+.
T Consensus 11 A~V~~~D~~tk~~W~p~g~~~---~~V~~~~d~~~~~yRIv~~~ 51 (120)
T 1ddw_A 11 AHVFQIDPNTKKNWVPTSKHA---VTVSYFYDSTRNVYRIISLD 51 (120)
T ss_dssp EEEEEECTTTSCSEEESCSSC---EEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEEcCCCCCceEeCCCCc---eEEEEEEcCCCCEEEEEEcc
Confidence 36888999996 997644321 11122234555678888755
No 233
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=34.02 E-value=2.1e+02 Score=23.91 Aligned_cols=152 Identities=11% Similarity=0.054 Sum_probs=67.7
Q ss_pred ecCCceEEEecCCCCeEEEEeCCcCceee-ccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCcccccc
Q 018005 107 SSSKGLLCFSLPSSSSFLVCNLVTLSSRT-IDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFD 185 (362)
Q Consensus 107 ~s~~Gll~~~~~~~~~~~v~NP~t~~w~~-lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~ 185 (362)
.+.+|-.++.+..++.+.+||..+++-.. +.. .......+.+.+. . ..++.++ ....+.+||...+.-....
T Consensus 73 ~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~--h~~~v~~~~~~~~--~-~~l~s~s--~D~~i~vwd~~~~~~~~~~ 145 (319)
T 3frx_A 73 LTADGAYALSASWDKTLRLWDVATGETYQRFVG--HKSDVMSVDIDKK--A-SMIISGS--RDKTIKVWTIKGQCLATLL 145 (319)
T ss_dssp ECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC--CSSCEEEEEECTT--S-CEEEEEE--TTSCEEEEETTSCEEEEEC
T ss_pred ECCCCCEEEEEeCCCEEEEEECCCCCeeEEEcc--CCCcEEEEEEcCC--C-CEEEEEe--CCCeEEEEECCCCeEEEEe
Confidence 34455444444456889999999987432 211 1111223333322 1 2333333 3457888988654322221
Q ss_pred cCCCCccccccCCCc-ccEEECCEEEEEecCCcEEEEEEcCCCeeecCCCCCcccccCCCCcccccceeecccCCCeEEE
Q 018005 186 IDGFPSMILSQSSHQ-EGVFYKGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYL 264 (362)
Q Consensus 186 ~~~~p~~~~~~~~~~-~~v~~~G~ly~~~~~~~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~L~v 264 (362)
+............ ....-++...+.++....+..+|+.+.+....... ..... ..+... -+|++++
T Consensus 146 --~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~-------h~~~v--~~~~~s--p~g~~l~ 212 (319)
T 3frx_A 146 --GHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIG-------HNSNI--NTLTAS--PDGTLIA 212 (319)
T ss_dssp --CCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECC-------CCSCE--EEEEEC--TTSSEEE
T ss_pred --ccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecC-------CCCcE--EEEEEc--CCCCEEE
Confidence 1110000000000 00011233444455555788999887654321101 11111 122211 4677666
Q ss_pred EEEeecCCccceEEEEEEC
Q 018005 265 IGGVGRNGISTTMKLWELG 283 (362)
Q Consensus 265 v~~~~~~~~~~~i~vw~l~ 283 (362)
.++ ....+.+|++.
T Consensus 213 s~~-----~dg~i~iwd~~ 226 (319)
T 3frx_A 213 SAG-----KDGEIMLWNLA 226 (319)
T ss_dssp EEE-----TTCEEEEEETT
T ss_pred EEe-----CCCeEEEEECC
Confidence 665 23677888764
No 234
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=33.98 E-value=3.2e+02 Score=26.06 Aligned_cols=186 Identities=13% Similarity=0.027 Sum_probs=89.4
Q ss_pred eEEEEeCCcCce--eeccCCCC-CCccceEEEEeCCCceEEEEEeeec-CCCeEEEEeCCCCcccccccCCCCccccccC
Q 018005 122 SFLVCNLVTLSS--RTIDFPTY-PFDFELLTLVSTPSGYKIFMLFAKS-FPNYAFVYDSTDQSWSKFDIDGFPSMILSQS 197 (362)
Q Consensus 122 ~~~v~NP~t~~w--~~lP~~~~-~~~~~~~~~~~~~~~ykv~~~~~~~-~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~ 197 (362)
.+++++.-|++- ..+-..+. +.......+.+++ .+.++.. ... ....+++++..++.|+.+. .-. .
T Consensus 203 ~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG-~~l~~~~-~~~~~~~~l~~~~~~~~~~~~l~--~~~------~ 272 (695)
T 2bkl_A 203 TIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDG-KYLFVYI-LRGWSENDVYWKRPGEKDFRLLV--KGV------G 272 (695)
T ss_dssp EEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTS-CCEEEEE-EETTTEEEEEEECTTCSSCEEEE--ECS------S
T ss_pred EEEEEECCCCchhceEEEecCCCCEEEEEEEECCCC-CEEEEEE-eCCCCceEEEEEcCCCCceEEee--cCC------C
Confidence 588899888773 22222111 1122233333333 3333332 222 2346777777677777665 111 1
Q ss_pred CCcccEEECCEEEEEec---CCcEEEEEEcCCCe---eecCCCCCcccccCCCCcccccceeecccCCCeEEEEEEeecC
Q 018005 198 SHQEGVFYKGSLYFTTP---EPFSIVRFDLENGI---WETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRN 271 (362)
Q Consensus 198 ~~~~~v~~~G~ly~~~~---~~~~i~~~D~~~~~---w~~~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~L~vv~~~~~~ 271 (362)
.....+..+|.+|+.+. ....|..+|+.+.. |..+..+ .+.. .-..+.. .+++|++....
T Consensus 273 ~~~~~~~~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~-------~~~~-~l~~~~~---~~~~lv~~~~~--- 338 (695)
T 2bkl_A 273 AKYEVHAWKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPE-------DSSA-SLLSVSI---VGGHLSLEYLK--- 338 (695)
T ss_dssp CCEEEEEETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECC-------CSSC-EEEEEEE---ETTEEEEEEEE---
T ss_pred ceEEEEecCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecC-------CCCC-eEEEEEE---ECCEEEEEEEE---
Confidence 12233445777776654 23689999987643 6654211 1111 1112222 57787777652
Q ss_pred CccceEEEEEECCCCCEEEEecccHHHHHHhhhccccCCccEEEE---eeCCEEEEEee--c-CCeEEEEECCCCceEEc
Q 018005 272 GISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCF---WHQGMICVCCY--T-WPEILYYNVARRTWHWL 345 (362)
Q Consensus 272 ~~~~~i~vw~l~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~i~~~~~--~-~~~v~~yd~~~~~w~~~ 345 (362)
....++|.++..+. ....++. . ....+..+ -.++.+++... . ...++.||+++++.+.+
T Consensus 339 --dg~~~l~~~~~~g~--~~~~l~~------~-----~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~~~l 403 (695)
T 2bkl_A 339 --DATSEVRVATLKGK--PVRTVQL------P-----GVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKSELW 403 (695)
T ss_dssp --TTEEEEEEEETTCC--EEEECCC------S-----SSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCEEEE
T ss_pred --CCEEEEEEEeCCCC--eeEEecC------C-----CCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEE
Confidence 24456666654443 1222210 0 00011111 12345554421 1 23689999999887665
Q ss_pred C
Q 018005 346 P 346 (362)
Q Consensus 346 ~ 346 (362)
.
T Consensus 404 ~ 404 (695)
T 2bkl_A 404 A 404 (695)
T ss_dssp E
T ss_pred e
Confidence 3
No 235
>1egx_A VAsp, vasodilator-stimulated phosphoprotein; EVH1, VAsp-ENA, poly-proline-binding domain, signaling protein; NMR {Homo sapiens} SCOP: b.55.1.4
Probab=33.60 E-value=43 Score=24.06 Aligned_cols=43 Identities=5% Similarity=-0.067 Sum_probs=25.0
Q ss_pred eEEEEeCCcCceeeccCCCCCCccceEEEEeCCCceEEEEEee
Q 018005 122 SFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFA 164 (362)
Q Consensus 122 ~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~ 164 (362)
.++++||.++.|............-++..+...+.|+|++...
T Consensus 12 ~V~~~d~~~~~W~p~~~g~~gvs~V~~~~d~~~~~yrI~~~~l 54 (115)
T 1egx_A 12 TVMLYDDGNKRWLPAGTGPQAFSRVQIYHNPTANSFRVVGRKM 54 (115)
T ss_dssp ECBEECTTTSSCCBSSCSCCCCEEEEEEEETTTTEEEEEEEES
T ss_pred EEEEEcCCCCceeECCCCCCCccEEEEEEeCCCCEEEEEEEEc
Confidence 5778999999986433211122122333445667788886553
No 236
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=33.53 E-value=2.3e+02 Score=24.31 Aligned_cols=163 Identities=12% Similarity=0.047 Sum_probs=74.6
Q ss_pred cCCceEEEecCCCCeEEEEeCCcCceeeccCC-CCCCccceEEEEeCCCceEEEEEeeecCC--CeEEEEeCCCCccccc
Q 018005 108 SSKGLLCFSLPSSSSFLVCNLVTLSSRTIDFP-TYPFDFELLTLVSTPSGYKIFMLFAKSFP--NYAFVYDSTDQSWSKF 184 (362)
Q Consensus 108 s~~Gll~~~~~~~~~~~v~NP~t~~w~~lP~~-~~~~~~~~~~~~~~~~~ykv~~~~~~~~~--~~~~vy~s~~~~W~~~ 184 (362)
+-+|-+++... .+.+.+++..+++....... ........+++.+.+ +.++.++.... ..+..++.........
T Consensus 185 spdg~~l~s~s-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg---~~l~~~s~d~~~~~~i~~~~~~~~~~~~~ 260 (365)
T 4h5i_A 185 STDGKVVAYIT-GSSLEVISTVTGSCIARKTDFDKNWSLSKINFIADD---TVLIAASLKKGKGIVLTKISIKSGNTSVL 260 (365)
T ss_dssp CTTSSEEEEEC-SSCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETT---EEEEEEEESSSCCEEEEEEEEETTEEEEE
T ss_pred ccCCceEEecc-ceeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCC---CEEEEEecCCcceeEEeecccccceecce
Confidence 44553333322 45678888888876543222 112222344454432 33333333222 2556666655544332
Q ss_pred ccCCCCccccccCCCcccEEE--CCEEEEEecCCcEEEEEEcCCCeeec-CCCCCcccccCCCCcccccceeecccCCCe
Q 018005 185 DIDGFPSMILSQSSHQEGVFY--KGSLYFTTPEPFSIVRFDLENGIWET-PNDANDHMTMMLPHELTFFRLVNDGEESNK 261 (362)
Q Consensus 185 ~~~~~p~~~~~~~~~~~~v~~--~G~ly~~~~~~~~i~~~D~~~~~w~~-~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~ 261 (362)
....+.. ....-.++.+ +|.+.+.+....+|..||..+.+-.. +... ...... .+..- -+|+
T Consensus 261 ~~~~~~~----~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~g-------H~~~V~--~v~fS--pdg~ 325 (365)
T 4h5i_A 261 RSKQVTN----RFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQA-------HSFAIT--EVTIS--PDST 325 (365)
T ss_dssp EEEEEES----SCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTS-------SSSCEE--EEEEC--TTSC
T ss_pred eeeeecC----CCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCc-------ccCCEE--EEEEC--CCCC
Confidence 2000000 0011112222 68877777766689999998865422 1101 111111 22211 5788
Q ss_pred EEEEEEeecCCccceEEEEEECCCC----C-EEEEecc
Q 018005 262 LYLIGGVGRNGISTTMKLWELGCGG----N-WIEVERV 294 (362)
Q Consensus 262 L~vv~~~~~~~~~~~i~vw~l~~~~----~-W~~v~~~ 294 (362)
+.+.+. ...++.||++...- + |+++..+
T Consensus 326 ~laS~S-----~D~tvrvw~ip~~~~~~~s~~~~l~kl 358 (365)
T 4h5i_A 326 YVASVS-----AANTIHIIKLPLNYANYTSMKQKISKL 358 (365)
T ss_dssp EEEEEE-----TTSEEEEEECCTTTTC-----------
T ss_pred EEEEEe-----CCCeEEEEEcCCCCcCccCccccceee
Confidence 777665 34899999984321 2 6665554
No 237
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=32.54 E-value=2.4e+02 Score=24.20 Aligned_cols=193 Identities=8% Similarity=0.012 Sum_probs=92.9
Q ss_pred ecCCc-eEEE-ecCCCCeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCccccc
Q 018005 107 SSSKG-LLCF-SLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKF 184 (362)
Q Consensus 107 ~s~~G-ll~~-~~~~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~ 184 (362)
-|-+| ++.+ .+..++.+.+||+.+++......- ......+++.+++ +.++.++ ...+.+++..++.-...
T Consensus 141 fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~--~~~V~~v~fspdg---~~l~s~s---~~~~~~~~~~~~~~~~~ 212 (365)
T 4h5i_A 141 ISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIET--RGEVKDLHFSTDG---KVVAYIT---GSSLEVISTVTGSCIAR 212 (365)
T ss_dssp ECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEEC--SSCCCEEEECTTS---SEEEEEC---SSCEEEEETTTCCEEEE
T ss_pred EcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCC--CCceEEEEEccCC---ceEEecc---ceeEEEEEeccCcceee
Confidence 45566 4433 343457899999999886554322 2223445555433 2333332 23566777666544322
Q ss_pred ccCCCCccccccCCCcccE-E-ECCEEEEEecCC----cEEEEEEcCCCeeecCCCCCcccccCCCCccc-ccceeeccc
Q 018005 185 DIDGFPSMILSQSSHQEGV-F-YKGSLYFTTPEP----FSIVRFDLENGIWETPNDANDHMTMMLPHELT-FFRLVNDGE 257 (362)
Q Consensus 185 ~~~~~p~~~~~~~~~~~~v-~-~~G~ly~~~~~~----~~i~~~D~~~~~w~~~~~p~~~~~~~~p~~~~-~~~lv~~~~ 257 (362)
. .... .......+ + -+|.....+... ..+..+|............. +..... -..+..-
T Consensus 213 ~--~~~~----~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~------~~~~~~~V~~~~~S-- 278 (365)
T 4h5i_A 213 K--TDFD----KNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQ------VTNRFKGITSMDVD-- 278 (365)
T ss_dssp E--CCCC----TTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEE------EESSCSCEEEEEEC--
T ss_pred e--ecCC----CCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeee------ecCCCCCeEeEEEC--
Confidence 2 0000 00001112 2 256666554321 24666776655443321000 111101 1122212
Q ss_pred CCCeEEEEEEeecCCccceEEEEEECCCCCEEEEecccHHHHHHhhhccccCCccEEEE--eeCCEEEEEeecCCeEEEE
Q 018005 258 ESNKLYLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCF--WHQGMICVCCYTWPEILYY 335 (362)
Q Consensus 258 ~~G~L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~v~~y 335 (362)
-+|++.+.+. ...+|.||+++ .+ ..+.++. . ++...+.++ .-++..++.....+.|-+|
T Consensus 279 pdg~~lasgs-----~D~~V~iwd~~-~~--~~~~~~~--------~---gH~~~V~~v~fSpdg~~laS~S~D~tvrvw 339 (365)
T 4h5i_A 279 MKGELAVLAS-----NDNSIALVKLK-DL--SMSKIFK--------Q---AHSFAITEVTISPDSTYVASVSAANTIHII 339 (365)
T ss_dssp TTSCEEEEEE-----TTSCEEEEETT-TT--EEEEEET--------T---SSSSCEEEEEECTTSCEEEEEETTSEEEEE
T ss_pred CCCCceEEEc-----CCCEEEEEECC-CC--cEEEEec--------C---cccCCEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 5888887776 23689999774 22 2333321 0 122333333 3455556666567789999
Q ss_pred ECCCC
Q 018005 336 NVARR 340 (362)
Q Consensus 336 d~~~~ 340 (362)
|+.++
T Consensus 340 ~ip~~ 344 (365)
T 4h5i_A 340 KLPLN 344 (365)
T ss_dssp ECCTT
T ss_pred EcCCC
Confidence 98654
No 238
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=28.60 E-value=3e+02 Score=24.11 Aligned_cols=105 Identities=17% Similarity=0.152 Sum_probs=54.9
Q ss_pred eEEEecCC--CCeEEEE--eCCcCceeeccCC--C--CC-CccceEEEE--eCCCceEEEEEeeecCCCeEEEEeC---C
Q 018005 112 LLCFSLPS--SSSFLVC--NLVTLSSRTIDFP--T--YP-FDFELLTLV--STPSGYKIFMLFAKSFPNYAFVYDS---T 177 (362)
Q Consensus 112 ll~~~~~~--~~~~~v~--NP~t~~w~~lP~~--~--~~-~~~~~~~~~--~~~~~ykv~~~~~~~~~~~~~vy~s---~ 177 (362)
+++..... .+.+.+| ||.++++..+..+ + .. ....++++- ..+..+-+++... . ..+++|+. +
T Consensus 88 la~as~R~~~~n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k--~-G~~~q~~l~~~~ 164 (355)
T 3amr_A 88 IAAASNRSEGKNTIEIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGK--E-GEFEQYELKADK 164 (355)
T ss_dssp EEEEEECSTTCCEEEEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECS--S-SEEEEEEEEECT
T ss_pred EEEEeCCCCCCCeEEEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECC--C-CeEEEEEEEeCC
Confidence 34555545 5777777 9999998888543 2 22 444566663 3233333343332 2 45666555 4
Q ss_pred CCcccccccCCCCccccccCCCcccEEE---CCEEEEEecCCcEEEEEEcC
Q 018005 178 DQSWSKFDIDGFPSMILSQSSHQEGVFY---KGSLYFTTPEPFSIVRFDLE 225 (362)
Q Consensus 178 ~~~W~~~~~~~~p~~~~~~~~~~~~v~~---~G~ly~~~~~~~~i~~~D~~ 225 (362)
.+.......-.+ .+. ....++++ .|.+|+-.+. ..|..||.+
T Consensus 165 ~g~~~~~lVR~f---~lg--sq~EgcvvDd~~g~Lyv~eEd-~GIw~~da~ 209 (355)
T 3amr_A 165 NGYISGKKVRAF---KMN--SQTEGMAADDEYGRLYIAEED-EAIWKFSAE 209 (355)
T ss_dssp TSCEEEEEEEEE---ECS--SCEEEEEEETTTTEEEEEETT-TEEEEEECS
T ss_pred CCcccceEEEEe---cCC--CCcceEEEcCCCCeEEEeccc-ceEEEEeCC
Confidence 444422110011 111 12334455 4899865544 579999955
No 239
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=27.47 E-value=2.8e+02 Score=23.46 Aligned_cols=147 Identities=14% Similarity=0.094 Sum_probs=74.0
Q ss_pred EEEEEeeecCCCeEEEEeCCCCc---ccccccCCCCccccccCCCcccEEE---CCEEEEEecCCcEEEEEEcCCCeeec
Q 018005 158 KIFMLFAKSFPNYAFVYDSTDQS---WSKFDIDGFPSMILSQSSHQEGVFY---KGSLYFTTPEPFSIVRFDLENGIWET 231 (362)
Q Consensus 158 kv~~~~~~~~~~~~~vy~s~~~~---W~~~~~~~~p~~~~~~~~~~~~v~~---~G~ly~~~~~~~~i~~~D~~~~~w~~ 231 (362)
+|+.+.. ....+..++..+.. +.... + + ....++.+ +|.+||.......|.++|++...-..
T Consensus 48 ~lyw~D~--~~~~I~r~~~~g~~~~~~~~~~--~-----l---~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~ 115 (318)
T 3sov_A 48 LIYWSDV--SEEAIKRTEFNKTESVQNVVVS--G-----L---LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKV 115 (318)
T ss_dssp EEEEEET--TTTEEEEEETTSSSCCCEEEEE--C-----C---SCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred EEEEEEC--CCCcEEEEEccCCCceEEEEcC--C-----C---CCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEE
Confidence 5665543 23567778776542 11111 1 1 12334444 68999998776789999987643222
Q ss_pred CCCCCcccccCCCCcccccceeecccCCCeEEEEEEeecCCccceEEEEEECCCCC--EEEEecccHHHHHHhhhccccC
Q 018005 232 PNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGISTTMKLWELGCGGN--WIEVERVPEMMCRKFMSVCYHN 309 (362)
Q Consensus 232 ~~~p~~~~~~~~p~~~~~~~lv~~~~~~G~L~vv~~~~~~~~~~~i~vw~l~~~~~--W~~v~~~p~~~~~~~~~~~~~~ 309 (362)
+.... . ..|. .+++. -.+|.||+... .....| ++++.+++ -..+.. .+ .
T Consensus 116 l~~~~--~--~~P~-----giavd-p~~g~ly~td~----~~~~~I--~r~~~dG~~~~~~~~~-------~l------~ 166 (318)
T 3sov_A 116 LFWQE--L--DQPR-----AIALD-PSSGFMYWTDW----GEVPKI--ERAGMDGSSRFIIINS-------EI------Y 166 (318)
T ss_dssp EECSS--C--SSEE-----EEEEE-GGGTEEEEEEC----SSSCEE--EEEETTSCSCEEEECS-------SC------S
T ss_pred EEeCC--C--CCcc-----EEEEe-CCCCEEEEEec----CCCCEE--EEEEcCCCCeEEEEEC-------CC------C
Confidence 21010 0 0122 23321 03688888763 112344 44444443 221211 00 0
Q ss_pred CccEEEEe-eCCEEEEEeecCCeEEEEECCCCceEEc
Q 018005 310 YDHVYCFW-HQGMICVCCYTWPEILYYNVARRTWHWL 345 (362)
Q Consensus 310 ~~~~~~~~-~~~~i~~~~~~~~~v~~yd~~~~~w~~~ 345 (362)
...-.++. .++.||+.......|..+|++...-+.+
T Consensus 167 ~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~ 203 (318)
T 3sov_A 167 WPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAV 203 (318)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred CccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEE
Confidence 11112223 3678999887777899999875544433
No 240
>2khu_A Immunoglobulin G-binding protein G, DNA polymerase IOTA; UBM, ubiquitin-binding domain, translesion synthesis, TLS, ubiquitin-binding protein; NMR {Streptococcus SP} PDB: 2khw_A 2l0f_B*
Probab=27.12 E-value=46 Score=22.89 Aligned_cols=22 Identities=27% Similarity=0.671 Sum_probs=17.7
Q ss_pred CCCCChhhhcCCCHHHHHHHHc
Q 018005 5 RREMDPAIWSRLPEDLLDHVLS 26 (362)
Q Consensus 5 ~~~~~~~~~~~LP~dll~~IL~ 26 (362)
++..+|+.-..||.|+..|.|+
T Consensus 65 Ps~VDP~VFyeLP~eVQ~ELla 86 (108)
T 2khu_A 65 PSDIDPQVFYELPEAVQKELLA 86 (108)
T ss_dssp CTTCCHHHHTTSCHHHHHHHHH
T ss_pred CCCCCHHHHHHccHHHHHHHHH
Confidence 4567888888999999888775
No 241
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=27.11 E-value=2.7e+02 Score=23.17 Aligned_cols=107 Identities=8% Similarity=-0.009 Sum_probs=51.1
Q ss_pred ceEEEecCCCCeEEEEeCCcC---ceeeccCCCCCCccceEEEEeCCCceEEEEEeee--------cCCCeEEEEeCCCC
Q 018005 111 GLLCFSLPSSSSFLVCNLVTL---SSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAK--------SFPNYAFVYDSTDQ 179 (362)
Q Consensus 111 Gll~~~~~~~~~~~v~NP~t~---~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~--------~~~~~~~vy~s~~~ 179 (362)
..+++.......+.++++.+. +...+...+ .-..++++..+ .+++.... .....+.+||+...
T Consensus 197 ~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~---gP~gi~~d~~G---~l~va~~~~~~~~~~~~~~~~v~~~d~~G~ 270 (322)
T 2fp8_A 197 SFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIP---NPGNIKRNADG---HFWVSSSEELDGNMHGRVDPKGIKFDEFGN 270 (322)
T ss_dssp SEEEEEEGGGTEEEEEESSSTTTTCEEEEEECS---SEEEEEECTTS---CEEEEEEEETTSSTTSCEEEEEEEECTTSC
T ss_pred CEEEEEeCCCCeEEEEECCCCcCCccceEEeCC---CCCCeEECCCC---CEEEEecCcccccccCCCccEEEEECCCCC
Confidence 356665444467888887652 222221111 11234444332 34443322 11235778887543
Q ss_pred cccccccCCCCccccccCCCcccEEECCEEEEEecCCcEEEEEEcCCC
Q 018005 180 SWSKFDIDGFPSMILSQSSHQEGVFYKGSLYFTTPEPFSIVRFDLENG 227 (362)
Q Consensus 180 ~W~~~~~~~~p~~~~~~~~~~~~v~~~G~ly~~~~~~~~i~~~D~~~~ 227 (362)
.-+... .|. ..........+.-+|.||+.+.....|..|+++..
T Consensus 271 ~~~~~~---~~~-g~~~~~~~~~~~~~g~L~v~~~~~~~i~~~~~~~~ 314 (322)
T 2fp8_A 271 ILEVIP---LPP-PFAGEHFEQIQEHDGLLYIGTLFHGSVGILVYDKK 314 (322)
T ss_dssp EEEEEE---CCT-TTTTSCCCEEEEETTEEEEECSSCSEEEEEEC---
T ss_pred EEEEEE---CCC-CCccccceEEEEeCCEEEEeecCCCceEEEecccc
Confidence 322222 121 11011122234458999988766678999998643
No 242
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=26.98 E-value=3.2e+02 Score=23.92 Aligned_cols=141 Identities=14% Similarity=0.232 Sum_probs=70.0
Q ss_pred CCeEEEE--eCCCCcccccccCCC--CccccccCCCcccEEE-----CCEEEEEec-CCcEEEEEEc---CCCeee--cC
Q 018005 168 PNYAFVY--DSTDQSWSKFDIDGF--PSMILSQSSHQEGVFY-----KGSLYFTTP-EPFSIVRFDL---ENGIWE--TP 232 (362)
Q Consensus 168 ~~~~~vy--~s~~~~W~~~~~~~~--p~~~~~~~~~~~~v~~-----~G~ly~~~~-~~~~i~~~D~---~~~~w~--~~ 232 (362)
..++.+| |+.++.++... .. |. .. ......++++ .|++|.... +...+..|++ .+.+.+ .+
T Consensus 98 ~n~l~vf~iDp~~~~l~~i~--~~~~pv-~t-~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lV 173 (355)
T 3amr_A 98 KNTIEIYAIDGKNGTLQSMT--DPDHPI-AT-AINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKV 173 (355)
T ss_dssp CCEEEEEEECTTTCCEEECS--CTTSCE-EC-CCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEE
T ss_pred CCeEEEEEECCCCCceeecc--ccccCc-CC-CCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEE
Confidence 5688888 76888888775 33 31 00 1022334444 366665543 2235666665 222221 11
Q ss_pred C-CCCcccccCCCCcccccceee-cccCCCeEEEEEEeecCCccceEEEEEEC--CCC--CEEEEecccHHHHHHhhhcc
Q 018005 233 N-DANDHMTMMLPHELTFFRLVN-DGEESNKLYLIGGVGRNGISTTMKLWELG--CGG--NWIEVERVPEMMCRKFMSVC 306 (362)
Q Consensus 233 ~-~p~~~~~~~~p~~~~~~~lv~-~~~~~G~L~vv~~~~~~~~~~~i~vw~l~--~~~--~W~~v~~~p~~~~~~~~~~~ 306 (362)
. .+ ++...+ .+++ . -.|.||+..- . ..||+++ ..+ +-+.+..++...+ .
T Consensus 174 R~f~-------lgsq~E--gcvvDd--~~g~Lyv~eE-------d-~GIw~~da~p~~~~~~~~v~~~~~g~l---~--- 228 (355)
T 3amr_A 174 RAFK-------MNSQTE--GMAADD--EYGRLYIAEE-------D-EAIWKFSAEPDGGSNGTVIDRADGRHL---T--- 228 (355)
T ss_dssp EEEE-------CSSCEE--EEEEET--TTTEEEEEET-------T-TEEEEEECSTTSCSCCEEEEEBSSSSB---C---
T ss_pred EEec-------CCCCcc--eEEEcC--CCCeEEEecc-------c-ceEEEEeCCcCCCCCceEEEEecCCcc---c---
Confidence 0 11 333222 2332 2 4588888753 1 3478886 333 2566655531100 0
Q ss_pred ccCCccEEEE-ee-C-CEEEEEeecCCeEEEEECC
Q 018005 307 YHNYDHVYCF-WH-Q-GMICVCCYTWPEILYYNVA 338 (362)
Q Consensus 307 ~~~~~~~~~~-~~-~-~~i~~~~~~~~~v~~yd~~ 338 (362)
..-..+... .. + +.+++.+...+...+||.+
T Consensus 229 -aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 229 -RDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp -SCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred -cCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 011122222 11 1 4688887677889999997
No 243
>2dk7_A Transcription elongation regulator 1; structural genomics, WW domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.85 E-value=34 Score=22.29 Aligned_cols=13 Identities=15% Similarity=0.051 Sum_probs=11.9
Q ss_pred CCeEEEEeCCcCc
Q 018005 120 SSSFLVCNLVTLS 132 (362)
Q Consensus 120 ~~~~~v~NP~t~~ 132 (362)
+++++.||+.|++
T Consensus 29 dGR~fyyN~~Tk~ 41 (73)
T 2dk7_A 29 DERVFFYNPTTRL 41 (73)
T ss_dssp SSCEEEEETTTTE
T ss_pred CCCEEEecCcccc
Confidence 5889999999999
No 244
>1evh_A WH1 domain, protein (MENA EVH1 domain); molecular recognition, actin dynamics, contractIle protein; 1.80A {Mus musculus} SCOP: b.55.1.4 PDB: 2xqn_M 2iyb_A
Probab=25.68 E-value=1.4e+02 Score=21.09 Aligned_cols=42 Identities=5% Similarity=-0.081 Sum_probs=24.8
Q ss_pred CeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCceEEEEEe
Q 018005 121 SSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLF 163 (362)
Q Consensus 121 ~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~ 163 (362)
-.++.+||.++.|...... .....-++..+...+.|+|+...
T Consensus 11 A~V~~~d~~~~~W~p~~~~-~g~s~V~~~~d~~~~~yrIv~~~ 52 (112)
T 1evh_A 11 AAVMVYDDANKKWVPAGGS-TGFSRVHIYHHTGNNTFRVVGRK 52 (112)
T ss_dssp EEEEEEETTTTEEEEGGGC-CSCEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEEcCCCCceEECCCC-CCceEEEEEEECCCCEEEEEEEE
Confidence 3678899999988765421 11111233334556778888654
No 245
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=24.08 E-value=5.4e+02 Score=25.57 Aligned_cols=94 Identities=6% Similarity=-0.034 Sum_probs=47.8
Q ss_pred CCCeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCCcccccccCCCCccccccCC
Q 018005 119 SSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILSQSS 198 (362)
Q Consensus 119 ~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~ 198 (362)
.++.+.+||..+.+...... .......+++.+ +. .++. ++ ....+.+||..++.-...- ..+ .
T Consensus 37 ~Dg~I~lw~~~~~~~~~~~~--~~~~V~~l~fsp--g~-~L~S-~s--~D~~v~lWd~~~~~~~~~~--~~~-------~ 99 (902)
T 2oaj_A 37 VTGEVHIYGQQQVEVVIKLE--DRSAIKEMRFVK--GI-YLVV-IN--AKDTVYVLSLYSQKVLTTV--FVP-------G 99 (902)
T ss_dssp TTSEEEEECSTTCEEEEECS--SCCCEEEEEEET--TT-EEEE-EE--TTCEEEEEETTTCSEEEEE--ECS-------S
T ss_pred CCCEEEEEeCCCcEEEEEcC--CCCCEEEEEEcC--CC-EEEE-EE--CcCeEEEEECCCCcEEEEE--cCC-------C
Confidence 35678888877666433211 122233455555 22 2333 22 3468999998776421110 000 0
Q ss_pred CcccEEE--CCEEEEEecCCcEEEEEEcCCCee
Q 018005 199 HQEGVFY--KGSLYFTTPEPFSIVRFDLENGIW 229 (362)
Q Consensus 199 ~~~~v~~--~G~ly~~~~~~~~i~~~D~~~~~w 229 (362)
....+.+ +|...+.+.....|..||+.+.+-
T Consensus 100 ~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~ 132 (902)
T 2oaj_A 100 KITSIDTDASLDWMLIGLQNGSMIVYDIDRDQL 132 (902)
T ss_dssp CEEEEECCTTCSEEEEEETTSCEEEEETTTTEE
T ss_pred CEEEEEECCCCCEEEEEcCCCcEEEEECCCCcc
Confidence 1111222 455555555555789999987764
No 246
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=22.42 E-value=3.8e+02 Score=23.66 Aligned_cols=83 Identities=7% Similarity=0.160 Sum_probs=47.8
Q ss_pred CCCeEEEEEEeecC----------CccceEEEEEECCCC-CEEEEecccHHHHHHhhhccccCCccEEEE-e------eC
Q 018005 258 ESNKLYLIGGVGRN----------GISTTMKLWELGCGG-NWIEVERVPEMMCRKFMSVCYHNYDHVYCF-W------HQ 319 (362)
Q Consensus 258 ~~G~L~vv~~~~~~----------~~~~~i~vw~l~~~~-~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~-~------~~ 319 (362)
-.|+|.|+..-... ....++.+|+|..++ +=.+...+|.+....- . ....+..- . .+
T Consensus 96 ~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~---S--~l~di~VD~~~~~~~c~~ 170 (381)
T 3q6k_A 96 DCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKP---T--YFGGFAVDVANPKGDCSE 170 (381)
T ss_dssp TTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCG---G--GEEEEEEEESCTTTTSCS
T ss_pred CCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccC---C--ccceEEEecccCCCCCCc
Confidence 47899999752111 123478888885442 4455556665432110 0 11122211 1 14
Q ss_pred CEEEEEeecCCeEEEEECCCC-ceEEc
Q 018005 320 GMICVCCYTWPEILYYNVARR-TWHWL 345 (362)
Q Consensus 320 ~~i~~~~~~~~~v~~yd~~~~-~w~~~ 345 (362)
+.+|+.......+++||++++ .|+..
T Consensus 171 ~~aYItD~~~~gLIVydl~~~~swRv~ 197 (381)
T 3q6k_A 171 TFVYITNFLRGALFIYDHKKQDSWNVT 197 (381)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred cEEEEEcCCCCcEEEEECCCCcEEEEc
Confidence 678998766778999999987 66665
No 247
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=22.18 E-value=4.6e+02 Score=24.09 Aligned_cols=109 Identities=14% Similarity=0.184 Sum_probs=60.5
Q ss_pred CceEEEecCCCCeEEEEeCCcCceeeccCCCC-CC-ccceEEE-------EeCCCceEEEEEeeecC----CCeEEEEeC
Q 018005 110 KGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTY-PF-DFELLTL-------VSTPSGYKIFMLFAKSF----PNYAFVYDS 176 (362)
Q Consensus 110 ~Gll~~~~~~~~~~~v~NP~t~~w~~lP~~~~-~~-~~~~~~~-------~~~~~~ykv~~~~~~~~----~~~~~vy~s 176 (362)
+|-|++.......+.+.|+.+++...+-.... .. ....+++ +..+. .+++...... ...+.+++.
T Consensus 151 ~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~--~lyvad~~~~~~~~~~~V~~i~r 228 (496)
T 3kya_A 151 KDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAE--YMIVAIDYDGKGDESPSVYIIKR 228 (496)
T ss_dssp EEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTC--EEEEEECCCTTGGGEEEEEEEEC
T ss_pred CCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCC--EEEEEeCCCCCcccCceEEEEec
Confidence 45555554334678889999998877654322 11 1234555 44332 4555443321 235777765
Q ss_pred CC-Ccccc-cccCCCCccccccCCCcccEEE---CCEEEEEecCCcEEEEEEcC
Q 018005 177 TD-QSWSK-FDIDGFPSMILSQSSHQEGVFY---KGSLYFTTPEPFSIVRFDLE 225 (362)
Q Consensus 177 ~~-~~W~~-~~~~~~p~~~~~~~~~~~~v~~---~G~ly~~~~~~~~i~~~D~~ 225 (362)
.. +.|.. .....++. . ....++.+ +|.||+.......|..||++
T Consensus 229 ~~~G~~~~~~~~~~v~~--~---~~p~giavdp~~g~LYvtd~~~g~V~r~d~~ 277 (496)
T 3kya_A 229 NADGTFDDRSDIQLIAA--Y---KQCNGATIHPINGELYFNSYEKGQVFRLDLV 277 (496)
T ss_dssp CTTSCCSTTSCEEEEEE--E---SCCCCEEECTTTCCEEEEETTTTEEEEECHH
T ss_pred CCCCceeecccceeecc--C---CCceEEEEcCCCCeEEEEECCCCEEEEEecc
Confidence 44 56642 10001111 1 22345555 58999988777789999997
No 248
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=20.44 E-value=3.5e+02 Score=21.98 Aligned_cols=223 Identities=12% Similarity=0.036 Sum_probs=103.0
Q ss_pred eeeeeeCCCCCeEeecCCcCC-CCCCceEEEecCC-ceEEEecCCCCeEEEEeCCcCceeec-cCCCCC---CccceEEE
Q 018005 77 QYPLYDSTHGTWRRLSLPYSL-LLPSAATLLSSSK-GLLCFSLPSSSSFLVCNLVTLSSRTI-DFPTYP---FDFELLTL 150 (362)
Q Consensus 77 ~~~~~d~~~~~w~~~~~~~~~-~~~~~~~~~~s~~-Gll~~~~~~~~~~~v~NP~t~~w~~l-P~~~~~---~~~~~~~~ 150 (362)
.+..||+..++...+..+... .......+....+ |-+++... ...+.++|+. ++...+ ...... .....+++
T Consensus 47 ~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~-~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~ 124 (314)
T 1pjx_A 47 EILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM-RLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAF 124 (314)
T ss_dssp EEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET-TTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEE
T ss_pred EEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC-CCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEE
Confidence 466788777776655432000 0011122333445 65555442 2478999998 887665 322111 11224444
Q ss_pred EeCCCceEEEEEeeec-------------CCCeEEEEeCCCCcccccccCCCCccccccCCCcccE-EE-----CC-EEE
Q 018005 151 VSTPSGYKIFMLFAKS-------------FPNYAFVYDSTDQSWSKFDIDGFPSMILSQSSHQEGV-FY-----KG-SLY 210 (362)
Q Consensus 151 ~~~~~~ykv~~~~~~~-------------~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~~~~v-~~-----~G-~ly 210 (362)
+..+ ++++..... ....+..|+.. +...... . .. ....++ +. +| .+|
T Consensus 125 d~~g---~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~--~----~~---~~~~~i~~~~~~d~dg~~l~ 191 (314)
T 1pjx_A 125 DYEG---NLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVD--T----AF---QFPNGIAVRHMNDGRPYQLI 191 (314)
T ss_dssp CTTS---CEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEE--E----EE---SSEEEEEEEECTTSCEEEEE
T ss_pred CCCC---CEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEec--c----CC---CCcceEEEecccCCCCCEEE
Confidence 4332 344333211 01367777765 4443321 0 00 011222 22 35 567
Q ss_pred EEecCCcEEEEEEcC-CCeeecCCCCCcccccCCCCc--ccccceeecccCCCeEEEEEEeecCCccceEEEEEECCC-C
Q 018005 211 FTTPEPFSIVRFDLE-NGIWETPNDANDHMTMMLPHE--LTFFRLVNDGEESNKLYLIGGVGRNGISTTMKLWELGCG-G 286 (362)
Q Consensus 211 ~~~~~~~~i~~~D~~-~~~w~~~~~p~~~~~~~~p~~--~~~~~lv~~~~~~G~L~vv~~~~~~~~~~~i~vw~l~~~-~ 286 (362)
+.......|..||++ +++......- .. ++.. ..-..+... .+|.|++.... ...+.+| +.. +
T Consensus 192 v~~~~~~~i~~~~~~~~g~~~~~~~~----~~-~~~~~~~~p~~i~~d--~~G~l~v~~~~-----~~~i~~~--d~~~g 257 (314)
T 1pjx_A 192 VAETPTKKLWSYDIKGPAKIENKKVW----GH-IPGTHEGGADGMDFD--EDNNLLVANWG-----SSHIEVF--GPDGG 257 (314)
T ss_dssp EEETTTTEEEEEEEEETTEEEEEEEE----EE-CCCCSSCEEEEEEEB--TTCCEEEEEET-----TTEEEEE--CTTCB
T ss_pred EEECCCCeEEEEECCCCCccccceEE----EE-CCCCCCCCCCceEEC--CCCCEEEEEcC-----CCEEEEE--cCCCC
Confidence 665555689999976 4443211000 00 1111 111223322 57899988651 2456666 433 3
Q ss_pred CEEEEecccHHHHHHhhhccccCCccEEEEee-CCEEEEEeecCCeEEEEECCCC
Q 018005 287 NWIEVERVPEMMCRKFMSVCYHNYDHVYCFWH-QGMICVCCYTWPEILYYNVARR 340 (362)
Q Consensus 287 ~W~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~v~~yd~~~~ 340 (362)
.-......+. ....-.++.. ++.||+.....+.|..||++..
T Consensus 258 ~~~~~~~~~~------------~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 258 QPKMRIRCPF------------EKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp SCSEEEECSS------------SCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred cEeEEEeCCC------------CCceeEEECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence 3111111210 0111112233 3458887755668999999865
No 249
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=20.33 E-value=4.7e+02 Score=23.42 Aligned_cols=27 Identities=7% Similarity=0.133 Sum_probs=19.5
Q ss_pred eeCCEEEEEeec-CCeEEEEECCCCceE
Q 018005 317 WHQGMICVCCYT-WPEILYYNVARRTWH 343 (362)
Q Consensus 317 ~~~~~i~~~~~~-~~~v~~yd~~~~~w~ 343 (362)
-++..+|+.... .+.|.++|+++++-.
T Consensus 186 pDGk~lyV~n~~~~~~VsVID~~t~kvv 213 (426)
T 3c75_H 186 PDNKNLLFYQFSPAPAVGVVDLEGKTFD 213 (426)
T ss_dssp TTSSEEEEEECSSSCEEEEEETTTTEEE
T ss_pred CCCCEEEEEecCCCCeEEEEECCCCeEE
Confidence 355678887654 567899999988654
No 250
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=20.20 E-value=4e+02 Score=22.55 Aligned_cols=60 Identities=8% Similarity=0.021 Sum_probs=31.5
Q ss_pred CceEEEecCCCCeEEEEeCCcCceeeccCCCCCCccceEEEEeCCCceEEEEEeeecCCCeEEEEeCCCC
Q 018005 110 KGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQ 179 (362)
Q Consensus 110 ~Gll~~~~~~~~~~~v~NP~t~~w~~lP~~~~~~~~~~~~~~~~~~~ykv~~~~~~~~~~~~~vy~s~~~ 179 (362)
++.+.+.+..++.+.+||..+++...--.. ......+.+.. ...+++ . ...+.+||..++
T Consensus 70 ~~~~~~~~~~d~~v~iWd~~~~~~~~~~~~--~~~v~~v~~~~---~~~~~~-~----~~~i~i~d~~~~ 129 (355)
T 3vu4_A 70 TNYVAFVTGVKEVVHIWDDVKKQDVSRIKV--DAPVKDLFLSR---EFIVVS-Y----GDVISVFKFGNP 129 (355)
T ss_dssp SSEEEEECSSTTEEEEEETTTTEEEEEEEC--SSCEEEEEECS---SEEEEE-E----TTEEEEEESSTT
T ss_pred CCEEEEEECCccEEEEEECCCCcEEEEEEC--CCceEEEEEcC---CEEEEE-E----cCEEEEEECCCC
Confidence 344444444457999999999875432111 11122223321 222222 1 347899998765
Done!